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ORF_ID	e_value	Gene_name	EC_number	CAZy	COGs	KEGG_ko	KEGG_Pathway	BRITE	Description
PHMJEDCH_00001	9.32e-317	dnaA	-	-	L	ko:K02313	ko02020,ko04112,map02020,map04112	ko00000,ko00001,ko03032,ko03036	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
PHMJEDCH_00002	2.83e-262	dnaN	2.7.7.7	-	L	ko:K02338	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
PHMJEDCH_00003	3.19e-45	yaaA	-	-	S	ko:K14761	-	ko00000,ko03009	S4 domain
PHMJEDCH_00004	1.07e-262	recF	-	-	L	ko:K03629	ko03440,map03440	ko00000,ko00001,ko03400	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
PHMJEDCH_00005	6.18e-52	yaaB	-	-	S	-	-	-	Domain of unknown function (DUF370)
PHMJEDCH_00006	0.0	gyrB	5.99.1.3	-	L	ko:K02470	-	ko00000,ko01000,ko03032,ko03400	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PHMJEDCH_00007	0.0	gyrA	5.99.1.3	-	L	ko:K02469	-	ko00000,ko01000,ko03032,ko03400	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PHMJEDCH_00008	2.25e-57	yaaC	-	-	S	-	-	-	YaaC-like Protein
PHMJEDCH_00009	0.0	guaB	1.1.1.205	-	F	ko:K00088	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth
PHMJEDCH_00010	1.03e-315	dacA	3.4.16.4	-	M	ko:K01286,ko:K07258	ko00550,ko01100,map00550,map01100	ko00000,ko00001,ko01000,ko01002,ko01011	Belongs to the peptidase S11 family
PHMJEDCH_00011	7.47e-202	pdxS	4.3.3.6	-	H	ko:K06215	ko00750,map00750	ko00000,ko00001,ko01000	Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
PHMJEDCH_00012	2.35e-138	pdxT	4.3.3.6	-	H	ko:K08681	ko00750,map00750	ko00000,ko00001,ko01000	Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
PHMJEDCH_00013	4.16e-281	serS	6.1.1.11	-	J	ko:K01875	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
PHMJEDCH_00014	2.36e-251	glxK	2.7.1.165	-	G	ko:K00865	ko00260,ko00561,ko00630,ko01100,ko01120,ko01130,map00260,map00561,map00630,map01100,map01120,map01130	ko00000,ko00001,ko01000	Belongs to the glycerate kinase type-1 family
PHMJEDCH_00016	1.4e-154	dck	2.7.1.74, 2.7.1.76	-	F	ko:K15519	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko01000	Deoxycytidine kinase
PHMJEDCH_00017	3.32e-148	dgk	2.7.1.113	-	F	ko:K15518	ko00230,map00230	ko00000,ko00001,ko01000	Deoxyguanosine kinase
PHMJEDCH_00018	8.84e-272	yaaH	-	-	M	ko:K06306	-	ko00000	Glycoside Hydrolase Family
PHMJEDCH_00019	1.88e-124	yaaI	-	-	Q	-	-	-	COG1335 Amidases related to nicotinamidase
PHMJEDCH_00020	5.61e-108	tadA	3.5.4.33	-	FJ	ko:K11991	-	ko00000,ko01000,ko03016	Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
PHMJEDCH_00021	0.0	dnaX	2.7.7.7	-	L	ko:K02343	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PHMJEDCH_00022	6.9e-52	yaaK	-	-	S	ko:K09747	-	ko00000	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
PHMJEDCH_00023	6e-142	recR	-	-	L	ko:K06187	ko03440,map03440	ko00000,ko00001,ko03400	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
PHMJEDCH_00024	7.67e-43	yaaL	-	-	S	-	-	-	Protein of unknown function (DUF2508)
PHMJEDCH_00025	2.16e-48	bofA	-	-	S	ko:K06317	-	ko00000	Sigma-K factor-processing regulatory protein BofA
PHMJEDCH_00026	9.3e-53	-	-	-	S	-	-	-	COG NOG14552 non supervised orthologous group
PHMJEDCH_00029	1.5e-40	csfB	-	-	S	-	-	-	Inhibitor of sigma-G Gin
PHMJEDCH_00030	2.12e-129	xpaC	-	-	S	-	-	-	5-bromo-4-chloroindolyl phosphate hydrolysis protein
PHMJEDCH_00031	5.18e-225	yaaN	-	-	P	-	-	-	Belongs to the TelA family
PHMJEDCH_00032	0.0	yaaO	-	-	E	-	-	-	Orn Lys Arg decarboxylase
PHMJEDCH_00033	7.14e-141	tmk	2.7.4.9	-	F	ko:K00943	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
PHMJEDCH_00034	5.03e-73	yaaQ	-	-	S	-	-	-	protein conserved in bacteria
PHMJEDCH_00035	2.86e-92	yaaR	-	-	S	ko:K09770	-	ko00000	protein conserved in bacteria
PHMJEDCH_00036	8.67e-230	holB	2.7.7.7	-	L	ko:K02341	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III
PHMJEDCH_00037	6.33e-189	yaaT	-	-	S	-	-	-	stage 0 sporulation protein
PHMJEDCH_00038	2.53e-55	yabA	-	-	L	-	-	-	Involved in initiation control of chromosome replication
PHMJEDCH_00039	1.34e-176	yabB	2.1.1.223	-	S	ko:K07461,ko:K15460	-	ko00000,ko01000,ko03016	Conserved hypothetical protein 95
PHMJEDCH_00040	1.64e-62	yazA	-	-	L	ko:K07461	-	ko00000	endonuclease containing a URI domain
PHMJEDCH_00041	9.82e-202	rsmI	2.1.1.198	-	H	ko:K07056	-	ko00000,ko01000,ko03009	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
PHMJEDCH_00042	3.56e-57	abrB	-	-	K	ko:K06284	-	ko00000,ko03000	COG2002 Regulators of stationary sporulation gene expression
PHMJEDCH_00043	0.0	metG	6.1.1.10	-	J	ko:K01874	ko00450,ko00970,map00450,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
PHMJEDCH_00044	1.44e-182	tatD	-	-	L	ko:K03424	-	ko00000,ko01000	hydrolase, TatD
PHMJEDCH_00045	3.55e-288	yabE	-	-	T	-	-	-	protein conserved in bacteria
PHMJEDCH_00046	3.1e-125	rnmV	3.1.26.8	-	J	ko:K05985	-	ko00000,ko01000	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
PHMJEDCH_00047	9.41e-200	ksgA	2.1.1.182	-	J	ko:K02528	-	ko00000,ko01000,ko03009	Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
PHMJEDCH_00048	1.46e-186	yabG	-	-	S	ko:K06436	-	ko00000	peptidase
PHMJEDCH_00049	5.32e-53	veg	-	-	S	-	-	-	protein conserved in bacteria
PHMJEDCH_00050	7.31e-38	sspF	-	-	S	ko:K06423	-	ko00000	DNA topological change
PHMJEDCH_00051	2.25e-205	ispE	2.7.1.148	-	I	ko:K00919,ko:K16924	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko02000	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
PHMJEDCH_00052	5.43e-195	purR	-	-	F	ko:K09685	-	ko00000,ko03000	pur operon repressor
PHMJEDCH_00053	7.5e-83	yabJ	3.5.99.10	-	J	ko:K09022	-	ko00000,ko01000	translation initiation inhibitor, yjgF family
PHMJEDCH_00054	4.23e-64	spoVG	-	-	D	ko:K06412	-	ko00000	Essential for sporulation. Interferes with or is a negative regulator of the pathway leading to asymmetric septation
PHMJEDCH_00055	0.0	glmU	2.3.1.157, 2.7.7.23	-	M	ko:K04042	ko00520,ko01100,ko01130,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
PHMJEDCH_00056	7.08e-223	prs	2.7.6.1	-	F	ko:K00948	ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PHMJEDCH_00057	1.4e-133	ctc	-	-	J	ko:K02897	ko03010,map03010	ko00000,ko00001,ko00002,ko03011	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
PHMJEDCH_00058	4.99e-136	pth	3.1.1.29	-	J	ko:K01056	-	ko00000,ko01000,ko03012	The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
PHMJEDCH_00059	5.24e-53	yabK	-	-	S	-	-	-	Peptide ABC transporter permease
PHMJEDCH_00060	0.0	mfd	-	-	L	ko:K03723	ko03420,map03420	ko00000,ko00001,ko01000,ko03400	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
PHMJEDCH_00061	1.09e-116	spoVT	-	-	K	ko:K04769	-	ko00000,ko03000	stage V sporulation protein
PHMJEDCH_00062	0.0	yabM	-	-	S	ko:K03328	-	ko00000	COG2244 Membrane protein involved in the export of O-antigen and teichoic acid
PHMJEDCH_00063	0.0	yabN	3.6.1.66	-	S	ko:K02428,ko:K02499	ko00230,map00230	ko00000,ko00001,ko01000,ko03036	COG3956 Protein containing tetrapyrrole methyltransferase domain and MazG-like
PHMJEDCH_00064	8.51e-50	yabO	-	-	J	-	-	-	COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)
PHMJEDCH_00065	5.47e-66	yabP	-	-	S	-	-	-	Sporulation protein YabP
PHMJEDCH_00066	5.13e-129	yabQ	-	-	S	-	-	-	spore cortex biosynthesis protein
PHMJEDCH_00067	2.42e-74	divIC	-	-	D	ko:K13052	-	ko00000,ko03036	Septum formation initiator
PHMJEDCH_00068	3.54e-82	yabR	-	-	J	ko:K07571	-	ko00000	RNA binding protein (contains ribosomal protein S1 domain)
PHMJEDCH_00071	0.0	spoIIE	3.1.3.16	-	KT	ko:K06382	-	ko00000,ko01000	stage II sporulation protein E
PHMJEDCH_00072	8.92e-165	yabS	-	-	S	ko:K07114	-	ko00000,ko02000	protein containing a von Willebrand factor type A (vWA) domain
PHMJEDCH_00073	1.18e-229	yabT	2.7.11.1	-	KLT	ko:K08884	-	ko00000,ko01000,ko01001	serine threonine protein kinase
PHMJEDCH_00074	0.0	tilS	2.4.2.8, 6.3.4.19	-	D	ko:K04075,ko:K15780	ko00230,ko01100,ko01110,map00230,map01100,map01110	ko00000,ko00001,ko01000,ko03016	Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
PHMJEDCH_00075	7.11e-118	hpt	2.4.2.8, 6.3.4.19	-	F	ko:K00760,ko:K15780	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko01000,ko03016	Belongs to the purine pyrimidine phosphoribosyltransferase family
PHMJEDCH_00076	0.0	ftsH	-	-	O	ko:K03798	-	ko00000,ko00002,ko01000,ko01002,ko03110	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
PHMJEDCH_00077	6.69e-177	coaX	2.7.1.33	-	F	ko:K03525	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
PHMJEDCH_00078	7.52e-205	hslO	-	-	O	ko:K04083	-	ko00000,ko03110	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
PHMJEDCH_00079	7.03e-192	yacD	5.2.1.8	-	O	ko:K07533	-	ko00000,ko01000,ko03110	peptidyl-prolyl isomerase
PHMJEDCH_00080	1.79e-216	cysK	2.5.1.47	-	E	ko:K01738	ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the cysteine synthase cystathionine beta- synthase family
PHMJEDCH_00081	0.0	pabB	2.6.1.85	-	EH	ko:K01665	ko00790,map00790	ko00000,ko00001,ko01000	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
PHMJEDCH_00082	5.14e-137	pabA	2.6.1.85	-	EH	ko:K01664	ko00790,map00790	ko00000,ko00001,ko01000	Anthranilate synthase
PHMJEDCH_00083	3.18e-191	pabC	4.1.3.38	-	EH	ko:K02619	ko00790,map00790	ko00000,ko00001,ko01000	4-amino-4-deoxychorismate lyase
PHMJEDCH_00084	1.62e-196	folP	2.5.1.15	-	H	ko:K00796	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
PHMJEDCH_00085	1.88e-80	folB	1.13.11.81, 4.1.2.25, 5.1.99.8	-	H	ko:K01633	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
PHMJEDCH_00086	4.38e-113	folK	2.7.6.3	-	H	ko:K00950	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
PHMJEDCH_00087	9.99e-39	yazB	-	-	K	-	-	-	transcriptional
PHMJEDCH_00088	8.33e-230	dus	-	-	J	ko:K05540	-	ko00000,ko01000,ko03016	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PHMJEDCH_00089	0.0	lysS	6.1.1.6	-	J	ko:K04567	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-II aminoacyl-tRNA synthetase family
PHMJEDCH_00090	9.3e-53	-	-	-	S	-	-	-	COG NOG14552 non supervised orthologous group
PHMJEDCH_00091	2.14e-100	ctsR	-	-	K	ko:K03708	-	ko00000,ko03000	Belongs to the CtsR family
PHMJEDCH_00092	8.58e-79	mcsA	-	-	S	ko:K19411	-	ko00000	protein with conserved CXXC pairs
PHMJEDCH_00093	3.84e-257	mcsB	2.7.14.1	-	E	ko:K19405	-	ko00000,ko01000	Catalyzes the specific phosphorylation of arginine residues in a large number of proteins. Is part of the bacterial stress response system. Protein arginine phosphorylation has a physiologically important role and is involved in the regulation of many critical cellular processes, such as protein homeostasis, motility, competence, and stringent and stress responses, by regulating gene expression and protein activity
PHMJEDCH_00094	0.0	clpC	-	-	O	ko:K03696	ko01100,map01100	ko00000,ko03110	Belongs to the ClpA ClpB family
PHMJEDCH_00095	0.0	radA	-	-	O	ko:K04485	-	ko00000,ko03400	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
PHMJEDCH_00096	3.64e-249	disA	2.7.7.85	-	L	ko:K07067	-	ko00000,ko01000	Has also diadenylate cyclase activity, catalyzing the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c- di-AMP acts as a signaling molecule that couples DNA integrity with progression of sporulation. The rise in c-di-AMP level generated by DisA while scanning the chromosome, operates as a positive signal that advances sporulation
PHMJEDCH_00097	1.85e-245	yacL	-	-	S	-	-	-	COG4956 Integral membrane protein (PIN domain superfamily)
PHMJEDCH_00098	1.13e-156	ispD	2.7.7.60	-	I	ko:K00991	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP)
PHMJEDCH_00099	1.23e-110	ispF	2.7.7.60, 4.6.1.12	-	I	ko:K01770,ko:K12506	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP)
PHMJEDCH_00100	0.0	gltX	6.1.1.24	-	J	ko:K09698	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
PHMJEDCH_00101	1.91e-152	cysE	2.3.1.30	-	E	ko:K00640	ko00270,ko00920,ko01100,ko01110,ko01120,ko01200,ko01230,ko05111,map00270,map00920,map01100,map01110,map01120,map01200,map01230,map05111	ko00000,ko00001,ko00002,ko01000	Serine acetyltransferase
PHMJEDCH_00102	0.0	cysS	6.1.1.16	-	J	ko:K01883	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-I aminoacyl-tRNA synthetase family
PHMJEDCH_00103	9.32e-92	mrnC	-	-	J	ko:K11145	-	ko00000,ko01000,ko03009	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
PHMJEDCH_00104	9.69e-171	trmH	2.1.1.185	-	J	ko:K03218	-	ko00000,ko01000,ko03009	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PHMJEDCH_00105	1.92e-113	yacP	-	-	S	ko:K06962	-	ko00000	RNA-binding protein containing a PIN domain
PHMJEDCH_00106	4.65e-149	sigH	-	-	K	ko:K03088,ko:K03091,ko:K12296	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko03000,ko03021	Belongs to the sigma-70 factor family
PHMJEDCH_00107	3.77e-32	secE	-	-	U	ko:K03073	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
PHMJEDCH_00108	3.99e-123	nusG	-	-	K	ko:K02601	-	ko00000,ko03009,ko03021	Participates in transcription elongation, termination and antitermination
PHMJEDCH_00109	3.4e-93	rplK	-	-	J	ko:K02867	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
PHMJEDCH_00110	2.04e-159	rplA	-	-	J	ko:K02863	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
PHMJEDCH_00111	6.68e-103	rplJ	-	-	J	ko:K02864	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
PHMJEDCH_00112	2.84e-64	rplL	-	-	J	ko:K02935	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
PHMJEDCH_00113	2.53e-140	rsmC	2.1.1.172	-	J	ko:K00564	-	ko00000,ko01000,ko03009	Methyltransferase
PHMJEDCH_00114	0.0	rpoB	2.7.7.6	-	K	ko:K03043	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PHMJEDCH_00115	0.0	rpoC	2.7.7.6	-	K	ko:K03046	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PHMJEDCH_00116	6.41e-43	rplGB	-	-	J	ko:K07590	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the eukaryotic ribosomal protein eL8 family
PHMJEDCH_00117	9.47e-94	rpsL	-	-	J	ko:K02950	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
PHMJEDCH_00118	4.85e-107	rpsG	-	-	J	ko:K02992	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
PHMJEDCH_00119	0.0	fusA	-	-	J	ko:K02355	-	ko00000,ko03012,ko03029	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
PHMJEDCH_00120	1.58e-284	tuf	-	-	J	ko:K02358	-	ko00000,ko03012,ko03029,ko04147	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
PHMJEDCH_00121	3.62e-220	ybaC	-	-	S	-	-	-	Alpha/beta hydrolase family
PHMJEDCH_00122	2.58e-65	rpsJ	-	-	J	ko:K02946	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Involved in the binding of tRNA to the ribosomes
PHMJEDCH_00123	1.02e-143	rplC	-	-	J	ko:K02906	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
PHMJEDCH_00124	3.68e-136	rplD	-	-	J	ko:K02926	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the polypeptide exit tunnel
PHMJEDCH_00125	3.27e-58	rplW	-	-	J	ko:K02892	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
PHMJEDCH_00126	3.87e-200	rplB	-	-	J	ko:K02886	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
PHMJEDCH_00127	2.83e-62	rpsS	-	-	J	ko:K02965	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
PHMJEDCH_00128	9.23e-71	rplV	-	-	J	ko:K02890	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
PHMJEDCH_00129	1.69e-151	rpsC	-	-	J	ko:K02982	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
PHMJEDCH_00130	1.38e-98	rplP	-	-	J	ko:K02878	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
PHMJEDCH_00131	1.88e-35	rpmC	-	-	J	ko:K02904	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uL29 family
PHMJEDCH_00132	1.92e-51	rpsQ	-	-	J	ko:K02961	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
PHMJEDCH_00133	1.04e-78	rplN	-	-	J	ko:K02874	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
PHMJEDCH_00134	5.83e-67	rplX	-	-	J	ko:K02895	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
PHMJEDCH_00135	2.58e-120	rplE	-	-	J	ko:K02931	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
PHMJEDCH_00136	1.43e-39	rpsN	-	-	J	ko:K02954	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PHMJEDCH_00137	1.08e-87	rpsH	-	-	J	ko:K02994	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
PHMJEDCH_00138	1.05e-119	rplF	-	-	J	ko:K02933	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
PHMJEDCH_00139	2.38e-74	rplR	-	-	J	ko:K02881	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
PHMJEDCH_00140	4.54e-111	rpsE	-	-	J	ko:K02988	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
PHMJEDCH_00141	1.59e-33	rpmD	-	-	J	ko:K02907	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L30
PHMJEDCH_00142	2.1e-94	rplO	-	-	J	ko:K02876	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	binds to the 23S rRNA
PHMJEDCH_00143	1.82e-294	secY	-	-	U	ko:K03076	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
PHMJEDCH_00144	2.51e-157	adk	2.7.4.3	-	F	ko:K00939	ko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
PHMJEDCH_00145	3.16e-180	map	3.4.11.18	-	E	ko:K01265	-	ko00000,ko01000,ko01002	Methionine aminopeptidase
PHMJEDCH_00146	2.92e-46	infA	-	-	J	ko:K02518	-	ko00000,ko03012	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
PHMJEDCH_00147	2.45e-19	rpmJ	-	-	J	ko:K02919	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL36 family
PHMJEDCH_00148	1.54e-75	rpsM	-	-	J	ko:K02952	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
PHMJEDCH_00149	4.61e-84	rpsK	-	-	J	ko:K02948	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
PHMJEDCH_00150	4.94e-217	rpoA	2.7.7.6	-	K	ko:K03040	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PHMJEDCH_00151	4.27e-77	rplQ	-	-	J	ko:K02879	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L17
PHMJEDCH_00152	6.9e-196	ecfA1	-	-	P	ko:K16786	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PHMJEDCH_00153	1.06e-184	ecfA2	-	-	P	ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PHMJEDCH_00154	8.86e-175	ecfT	-	-	P	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PHMJEDCH_00155	3.42e-179	truA	5.4.99.12	-	J	ko:K06173	-	ko00000,ko01000,ko03016	Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
PHMJEDCH_00156	3.79e-101	rplM	-	-	J	ko:K02871	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
PHMJEDCH_00157	1.49e-84	rpsI	-	-	J	ko:K02996	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uS9 family
PHMJEDCH_00158	4.46e-179	ybaJ	-	-	Q	-	-	-	Methyltransferase domain
PHMJEDCH_00160	2.28e-99	ybaK	-	-	S	-	-	-	Protein of unknown function (DUF2521)
PHMJEDCH_00161	4.3e-168	cwlD	3.5.1.28	-	M	ko:K01448	ko01503,map01503	ko00000,ko00001,ko00002,ko01000,ko01011,ko03036	n-acetylmuramoyl-L-alanine amidase
PHMJEDCH_00162	4.58e-247	mrp	-	-	D	ko:K03593	-	ko00000,ko03029,ko03036	Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP
PHMJEDCH_00163	1.95e-102	gerD	-	-	-	ko:K06294	-	ko00000	-
PHMJEDCH_00164	1.25e-134	kbaA	-	-	S	ko:K06349	-	ko00000	Involved in the activation of the KinB signaling pathway of sporulation
PHMJEDCH_00165	1.09e-174	pdaB	-	-	G	-	-	-	Polysaccharide deacetylase
PHMJEDCH_00166	9.3e-53	-	-	-	S	-	-	-	COG NOG14552 non supervised orthologous group
PHMJEDCH_00172	1.55e-51	-	-	-	S	-	-	-	COG NOG14552 non supervised orthologous group
PHMJEDCH_00173	2.1e-270	glcP1	-	-	G	ko:K08174	-	ko00000,ko02000	Major Facilitator Superfamily
PHMJEDCH_00174	1.22e-311	gabT	2.6.1.19	-	E	ko:K00823	ko00250,ko00410,ko00640,ko00650,ko01100,ko01120,map00250,map00410,map00640,map00650,map01100,map01120	ko00000,ko00001,ko00002,ko01000,ko01007	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
PHMJEDCH_00175	1.75e-227	suhB	3.1.3.25, 3.1.3.7	-	G	ko:K01082,ko:K01092	ko00521,ko00562,ko00920,ko01100,ko01120,ko01130,ko04070,map00521,map00562,map00920,map01100,map01120,map01130,map04070	ko00000,ko00001,ko00002,ko01000,ko03016	inositol monophosphate 1-phosphatase activity
PHMJEDCH_00176	1.33e-254	-	1.1.1.14, 1.1.1.303, 1.1.1.4	-	E	ko:K00004,ko:K00008	ko00040,ko00051,ko00650,ko01100,map00040,map00051,map00650,map01100	ko00000,ko00001,ko00002,ko01000	alcohol dehydrogenase
PHMJEDCH_00177	1.24e-284	ybaR	-	-	P	ko:K03321	-	ko00000,ko02000	COG0659 Sulfate permease and related transporters (MFS superfamily)
PHMJEDCH_00178	7.81e-216	ybaS	-	-	S	-	-	-	Na -dependent transporter
PHMJEDCH_00179	1.41e-129	ybbA	-	-	S	ko:K07017	-	ko00000	Putative esterase
PHMJEDCH_00180	1.21e-223	feuC	-	-	P	ko:K02015	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PHMJEDCH_00181	5.16e-225	feuB	-	-	P	ko:K02015	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PHMJEDCH_00182	3.89e-216	feuA	-	-	P	ko:K02016	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Iron-uptake system-binding protein
PHMJEDCH_00183	0.0	ybbB	-	-	K	ko:K21701	-	ko00000,ko03000	COG2207 AraC-type DNA-binding domain-containing proteins
PHMJEDCH_00184	2.2e-291	ybbC	-	-	S	-	-	-	protein conserved in bacteria
PHMJEDCH_00185	0.0	ybbD	3.2.1.52	-	G	ko:K01207	ko00520,ko00531,ko01100,ko01501,map00520,map00531,map01100,map01501	ko00000,ko00001,ko00002,ko01000	Belongs to the glycosyl hydrolase 3 family
PHMJEDCH_00186	4.35e-300	ybbE	3.4.16.4	-	V	ko:K21469	ko00550,map00550	ko00000,ko00001,ko01000,ko01002,ko01011	Belongs to the UPF0214 family
PHMJEDCH_00187	2e-301	ybbF	2.7.1.211	-	G	ko:K02808,ko:K02809,ko:K02810	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
PHMJEDCH_00188	1.28e-205	murQ	4.2.1.126	-	G	ko:K07106	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
PHMJEDCH_00189	1.14e-106	ybbJ	-	-	J	-	-	-	acetyltransferase
PHMJEDCH_00190	4.36e-98	ybbK	-	-	S	-	-	-	Protein of unknown function (DUF523)
PHMJEDCH_00196	4.59e-127	sigW	-	-	K	ko:K03088	-	ko00000,ko03021	Belongs to the sigma-70 factor family. ECF subfamily
PHMJEDCH_00197	1.7e-146	rsiW	-	-	K	-	-	-	Is the anti-sigma factor for SigW. The presence of RsiW leads to the inactivation of SigW, and its proteolytic destruction to sigma-W activation
PHMJEDCH_00198	9e-188	dacA	2.7.7.85	-	S	ko:K18672	-	ko00000,ko01000	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
PHMJEDCH_00199	7.78e-292	ybbR	-	-	S	-	-	-	protein conserved in bacteria
PHMJEDCH_00200	0.0	glmM	5.4.2.10	-	G	ko:K03431	ko00520,ko01100,ko01130,map00520,map01100,map01130	ko00000,ko00001,ko01000	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
PHMJEDCH_00201	0.0	glmS	2.6.1.16	-	M	ko:K00820	ko00250,ko00520,ko01100,ko01130,ko04931,map00250,map00520,map01100,map01130,map04931	ko00000,ko00001,ko01000,ko01002	Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
PHMJEDCH_00202	2.66e-27	-	-	-	S	-	-	-	peptidyl-tyrosine sulfation
PHMJEDCH_00203	6.58e-222	-	-	-	O	-	-	-	growth
PHMJEDCH_00204	5.91e-68	-	-	-	S	-	-	-	ABC-2 family transporter protein
PHMJEDCH_00205	5.33e-125	ybdN	-	-	-	-	-	-	-
PHMJEDCH_00206	4.11e-166	ybdO	-	-	S	-	-	-	Domain of unknown function (DUF4885)
PHMJEDCH_00207	5.5e-202	dkgB	-	-	S	-	-	-	Aldo/keto reductase family
PHMJEDCH_00208	3.49e-134	yxaC	-	-	M	-	-	-	effector of murein hydrolase
PHMJEDCH_00209	6.65e-66	-	-	-	S	ko:K06518	-	ko00000,ko02000	LrgA family
PHMJEDCH_00210	6.3e-90	-	-	-	K	-	-	-	helix_turn_helix multiple antibiotic resistance protein
PHMJEDCH_00211	0.0	ybxG	-	-	E	ko:K03293	-	ko00000	COG1113 Gamma-aminobutyrate permease and related permeases
PHMJEDCH_00212	3.75e-119	yfnB	3.8.1.2	-	S	ko:K01560,ko:K07025	ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120	ko00000,ko00001,ko01000	Haloacid dehalogenase-like hydrolase
PHMJEDCH_00213	3.42e-230	-	-	-	T	-	-	-	COG4585 Signal transduction histidine kinase
PHMJEDCH_00214	5.76e-132	yfiK	-	-	KT	ko:K02479	-	ko00000,ko02022	LuxR family transcriptional regulator
PHMJEDCH_00215	9.05e-207	yfiL	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	COG1131 ABC-type multidrug transport system, ATPase component
PHMJEDCH_00216	2.36e-242	-	-	-	V	ko:K01992	-	ko00000,ko00002,ko02000	COG0842 ABC-type multidrug transport system, permease component
PHMJEDCH_00217	1.98e-231	-	-	-	V	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 family transporter protein
PHMJEDCH_00218	6.5e-33	-	-	-	-	-	-	-	-
PHMJEDCH_00219	3.66e-103	-	-	-	S	-	-	-	Domain of unknown function (DUF4879)
PHMJEDCH_00220	2.48e-52	csgA	-	-	S	-	-	-	Sigma-G-dependent sporulation-specific SASP protein
PHMJEDCH_00221	3.92e-18	yqeB	-	-	-	-	-	-	-
PHMJEDCH_00222	8.46e-86	yqeB	-	-	-	-	-	-	-
PHMJEDCH_00223	6.22e-52	ybyB	-	-	-	-	-	-	-
PHMJEDCH_00224	0.0	ybeC	-	-	E	-	-	-	amino acid
PHMJEDCH_00226	3.62e-22	-	-	-	S	-	-	-	Protein of unknown function (DUF2651)
PHMJEDCH_00227	3.07e-208	glpQ	3.1.3.1, 3.1.4.46	-	C	ko:K01113,ko:K01126	ko00564,ko00790,ko01100,ko02020,map00564,map00790,map01100,map02020	ko00000,ko00001,ko00002,ko01000	glycerophosphoryl diester phosphodiesterase
PHMJEDCH_00228	0.0	glpT	-	-	G	ko:K02445	-	ko00000,ko02000	-transporter
PHMJEDCH_00229	1.43e-23	-	-	-	S	-	-	-	Protein of unknown function (DUF2651)
PHMJEDCH_00230	7.87e-262	yoaI	1.14.14.9	-	Q	ko:K00483	ko00350,ko01120,ko01220,map00350,map01120,map01220	ko00000,ko00001,ko01000	COG2368 Aromatic ring hydroxylase
PHMJEDCH_00232	1.14e-105	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
PHMJEDCH_00233	5.91e-239	ypjH	-	-	C	ko:K08317	-	ko00000,ko01000	COG0371 Glycerol dehydrogenase and related enzymes
PHMJEDCH_00234	8.16e-265	purT	2.1.2.2	-	F	ko:K08289	ko00230,ko00670,ko01100,ko01110,ko01130,map00230,map00670,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
PHMJEDCH_00235	9.04e-120	pssA	2.7.8.8	-	I	ko:K17103	ko00260,ko00564,ko01100,ko01110,map00260,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
PHMJEDCH_00236	3.37e-110	ybfM	-	-	S	-	-	-	SNARE associated Golgi protein
PHMJEDCH_00237	4.85e-191	psd	4.1.1.65	-	I	ko:K01613	ko00564,ko01100,ko01110,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer)
PHMJEDCH_00238	9.76e-52	ybfN	-	-	-	-	-	-	-
PHMJEDCH_00239	1.78e-239	ybfQ	-	-	S	ko:K07146	-	ko00000	Belongs to the UPF0176 family
PHMJEDCH_00240	5.27e-266	gltP	-	-	C	ko:K11102	-	ko00000,ko02000	Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
PHMJEDCH_00241	4.24e-248	ilvE	2.6.1.42	-	E	ko:K00826	ko00270,ko00280,ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00270,map00280,map00290,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Branched-chain amino acid aminotransferase
PHMJEDCH_00242	8.9e-317	ybgF	-	-	E	ko:K02205,ko:K03293,ko:K16235,ko:K16236	-	ko00000,ko02000	amino acid
PHMJEDCH_00243	3.97e-228	mmuM	2.1.1.10	-	H	ko:K00547	ko00270,ko01100,ko01110,map00270,map01100,map01110	ko00000,ko00001,ko01000	homocysteine
PHMJEDCH_00244	0.0	agcS	-	-	E	ko:K03310,ko:K11626	ko02020,map02020	ko00000,ko00001	Sodium alanine symporter
PHMJEDCH_00245	5.3e-239	glsA	3.5.1.2	-	E	ko:K01425	ko00220,ko00250,ko00471,ko01100,ko04724,ko04727,ko04964,ko05206,ko05230,map00220,map00250,map00471,map01100,map04724,map04727,map04964,map05206,map05230	ko00000,ko00001,ko01000	Belongs to the glutaminase family
PHMJEDCH_00246	2.63e-264	glnJ	2.7.13.3	-	T	ko:K07717	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
PHMJEDCH_00247	2.43e-197	glnL	-	-	T	ko:K07719	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	Regulator
PHMJEDCH_00248	9.37e-158	ycbJ	-	-	S	ko:K06979	-	br01600,ko00000,ko00002,ko01504	Macrolide 2'-phosphotransferase
PHMJEDCH_00249	3.3e-33	rtpA	-	-	K	-	-	-	Tryptophan RNA-binding attenuator protein inhibitory protein
PHMJEDCH_00250	9.53e-38	-	-	-	L	-	-	-	Transposase
PHMJEDCH_00251	4.28e-198	ydfM	-	-	P	-	-	-	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
PHMJEDCH_00252	1.91e-142	ydfN	-	-	C	ko:K15976	-	ko00000,ko01000	nitroreductase
PHMJEDCH_00253	2.41e-232	ydfO	-	-	E	ko:K15975	-	ko00000	COG0346 Lactoylglutathione lyase and related lyases
PHMJEDCH_00254	7.71e-82	ydfP	-	-	S	ko:K15977	-	ko00000	DoxX
PHMJEDCH_00255	3.23e-75	ydfQ	-	-	CO	-	-	-	Thioredoxin
PHMJEDCH_00256	4.68e-82	ycbP	-	-	S	-	-	-	Protein of unknown function (DUF2512)
PHMJEDCH_00257	9.01e-103	cwlJ	3.5.1.28	-	M	ko:K01449	-	ko00000,ko01000	Cell wall
PHMJEDCH_00258	0.0	phoD	3.1.3.1	-	P	ko:K01113	ko00790,ko01100,ko02020,map00790,map01100,map02020	ko00000,ko00001,ko00002,ko01000	COG3540 Phosphodiesterase alkaline phosphatase D
PHMJEDCH_00259	5.03e-35	tatAD	-	-	U	ko:K03116	ko03060,ko03070,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system
PHMJEDCH_00260	1.44e-155	tatC	-	-	U	ko:K03118	ko03060,ko03070,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
PHMJEDCH_00261	1.4e-153	pcp	3.4.19.3	-	O	ko:K01304	-	ko00000,ko01000,ko01002	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
PHMJEDCH_00262	7.85e-247	ycbU	-	-	E	-	-	-	Selenocysteine lyase
PHMJEDCH_00263	1.26e-306	lmrB	-	-	EGP	ko:K18926	-	ko00000,ko00002,ko02000	the major facilitator superfamily
PHMJEDCH_00264	3.35e-125	lmrA	-	-	K	ko:K18939	-	ko00000,ko00002,ko03000	Transcriptional regulator
PHMJEDCH_00265	1.44e-141	lip	3.1.1.3	-	S	ko:K01046	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko00002,ko01000	acetyltransferases and hydrolases with the alpha beta hydrolase fold
PHMJEDCH_00266	2.44e-245	yccF	-	-	K	ko:K07039	-	ko00000	SEC-C motif
PHMJEDCH_00267	9.13e-211	yccK	-	-	C	-	-	-	Aldo keto reductase
PHMJEDCH_00268	4.62e-210	ycdA	-	-	S	-	-	-	Domain of unknown function (DUF5105)
PHMJEDCH_00269	2.82e-300	ycdB	-	-	K	ko:K03088	-	ko00000,ko03021	Belongs to the sigma-70 factor family. ECF subfamily
PHMJEDCH_00270	0.0	ycdC	-	-	K	ko:K03088	-	ko00000,ko03021	Belongs to the sigma-70 factor family. ECF subfamily
PHMJEDCH_00271	5.55e-116	-	-	-	M	ko:K17733	-	ko00000,ko01000,ko01002,ko01011	D-alanyl-D-alanine carboxypeptidase
PHMJEDCH_00272	3.74e-221	rapJ	-	-	S	ko:K06368	-	ko00000,ko01000	Response regulator aspartate phosphatase
PHMJEDCH_00273	6.52e-174	gdh	1.1.1.47	-	IQ	ko:K00034	ko00030,ko01120,ko01200,map00030,map01120,map01200	ko00000,ko00001,ko01000	Enoyl-(Acyl carrier protein) reductase
PHMJEDCH_00274	0.0	malL	3.2.1.10, 3.2.1.20	GH13,GH31	G	ko:K01182,ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	COG0366 Glycosidases
PHMJEDCH_00275	1.5e-62	-	-	-	S	-	-	-	Domain of unknown function (DUF4188)
PHMJEDCH_00276	1.86e-62	-	-	-	K	-	-	-	Virulence activator alpha C-term
PHMJEDCH_00277	5.72e-214	adcA	-	-	P	ko:K09815	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the bacterial solute-binding protein 9 family
PHMJEDCH_00278	1.15e-169	adcC	-	-	P	ko:K02074,ko:K09817	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	'COG1121 ABC-type Mn Zn transport systems, ATPase component'
PHMJEDCH_00279	1.38e-173	adcB	-	-	P	ko:K09816	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG1108 ABC-type Mn2 Zn2 transport systems, permease components
PHMJEDCH_00280	8.68e-231	yceB	-	-	C	-	-	-	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
PHMJEDCH_00281	9.56e-139	yceC	3.5.4.33	-	T	ko:K11991	-	ko00000,ko01000,ko03016	proteins involved in stress response, homologs of TerZ and
PHMJEDCH_00282	7.32e-136	yceD	-	-	T	ko:K05795	-	ko00000	proteins involved in stress response, homologs of TerZ and
PHMJEDCH_00283	3.36e-136	yceE	-	-	T	ko:K05795	-	ko00000	proteins involved in stress response, homologs of TerZ and
PHMJEDCH_00284	4.28e-178	yceF	-	-	P	ko:K05794	-	ko00000	Protein of unknown function (DUF475)
PHMJEDCH_00285	0.0	yceG	-	-	S	-	-	-	Putative component of 'biosynthetic module'
PHMJEDCH_00286	1.36e-245	yceH	-	-	P	-	-	-	Belongs to the TelA family
PHMJEDCH_00287	2.43e-265	yceI	-	-	P	ko:K08369	-	ko00000,ko02000	Uncharacterised MFS-type transporter YbfB
PHMJEDCH_00289	7.07e-290	opuAA	3.6.3.32	-	E	ko:K02000	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	glycine betaine
PHMJEDCH_00290	3.48e-185	opuAB	-	-	P	ko:K02001	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	glycine betaine
PHMJEDCH_00291	4.54e-207	opuAC	-	-	E	ko:K02001,ko:K02002	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	glycine betaine
PHMJEDCH_00292	3.87e-262	amhX	-	-	S	ko:K14665	-	ko00000,ko01000,ko01002	amidohydrolase
PHMJEDCH_00293	8.16e-287	ycgA	-	-	S	-	-	-	Membrane
PHMJEDCH_00294	1.04e-53	ycgB	-	-	-	-	-	-	-
PHMJEDCH_00295	1.05e-15	-	-	-	S	-	-	-	RDD family
PHMJEDCH_00296	1.28e-225	ldh	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	Belongs to the LDH MDH superfamily. LDH family
PHMJEDCH_00297	0.0	mdr	-	-	EGP	-	-	-	the major facilitator superfamily
PHMJEDCH_00298	6.38e-97	ycgE	-	-	K	-	-	-	helix_turn_helix multiple antibiotic resistance protein
PHMJEDCH_00299	3.18e-147	ycgF	-	-	E	-	-	-	Lysine exporter protein LysE YggA
PHMJEDCH_00300	5.9e-183	yqcI	-	-	S	ko:K09190	-	ko00000	YqcI/YcgG family
PHMJEDCH_00301	1.95e-303	ycgH	-	-	E	ko:K03293	-	ko00000	COG1113 Gamma-aminobutyrate permease and related permeases
PHMJEDCH_00302	6.25e-144	ycgI	-	-	S	ko:K09967	-	ko00000	Domain of unknown function (DUF1989)
PHMJEDCH_00303	3.54e-189	nadE	6.3.1.5	-	H	ko:K01916	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
PHMJEDCH_00304	1.69e-164	-	4.2.1.118	-	G	ko:K15652	ko00400,ko01110,ko01130,map00400,map01110,map01130	ko00000,ko00001,ko01000	Xylose isomerase-like TIM barrel
PHMJEDCH_00305	3.35e-288	-	-	-	G	ko:K08191,ko:K08194	-	ko00000,ko02000	COG0477 Permeases of the major facilitator superfamily
PHMJEDCH_00306	1.43e-134	aroK	2.7.1.71	-	F	ko:K00891	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
PHMJEDCH_00307	9.05e-231	cah	3.1.1.41	-	Q	ko:K01060	ko00311,ko01130,map00311,map01130	ko00000,ko00001,ko01000	Acetyl xylan esterase (AXE1)
PHMJEDCH_00308	8.28e-178	ycgL	-	-	S	ko:K07074	-	ko00000	Predicted nucleotidyltransferase
PHMJEDCH_00309	1.53e-213	ycgM	-	-	E	ko:K00318	ko00330,ko01100,ko01110,ko01130,map00330,map01100,map01110,map01130	ko00000,ko00001,ko01000	Proline dehydrogenase
PHMJEDCH_00310	0.0	rocA	1.2.1.88	-	C	ko:K00294	ko00250,ko00330,ko01100,map00250,map00330,map01100	ko00000,ko00001,ko01000	Belongs to the aldehyde dehydrogenase family. RocA subfamily
PHMJEDCH_00311	1.05e-309	putP	-	-	E	ko:K11928	-	ko00000,ko02000	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
PHMJEDCH_00312	7.58e-286	ycgP	-	-	QT	-	-	-	COG2508 Regulator of polyketide synthase expression
PHMJEDCH_00313	4.86e-235	ycgT	1.18.1.2, 1.19.1.1	-	C	ko:K21567	-	ko00000,ko01000	Ferredoxin--NADP reductase
PHMJEDCH_00314	0.0	nasF	2.1.1.107, 4.2.1.75	-	H	ko:K13542	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	ko00000,ko00001,ko00002,ko01000	Belongs to the precorrin methyltransferase family
PHMJEDCH_00315	1.64e-72	nasE	1.7.1.15	-	P	ko:K00363	ko00910,ko01120,map00910,map01120	ko00000,ko00001,ko00002,ko01000	Nitrite reductase
PHMJEDCH_00316	0.0	nasD	1.7.1.15	-	C	ko:K00362	ko00910,ko01120,map00910,map01120	ko00000,ko00001,ko00002,ko01000	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
PHMJEDCH_00317	1.41e-49	nasA	-	-	P	ko:K02575	ko00910,map00910	ko00000,ko00001,ko00002,ko02000	COG2223 Nitrate nitrite transporter
PHMJEDCH_00318	9.85e-281	yciC	-	-	S	-	-	-	GTPases (G3E family)
PHMJEDCH_00319	2.62e-278	fdh	1.1.1.1, 1.1.1.284	-	E	ko:K00121	ko00010,ko00071,ko00350,ko00625,ko00626,ko00680,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01200,ko01220,ko05204,map00010,map00071,map00350,map00625,map00626,map00680,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01200,map01220,map05204	ko00000,ko00001,ko01000	COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases
PHMJEDCH_00320	3.65e-94	yckC	-	-	S	-	-	-	membrane
PHMJEDCH_00321	7.52e-65	-	-	-	S	-	-	-	Protein of unknown function (DUF2680)
PHMJEDCH_00322	0.0	yckE	3.2.1.21, 3.2.1.85, 3.2.1.86	GT1	G	ko:K01220,ko:K01223,ko:K05350	ko00010,ko00052,ko00460,ko00500,ko00940,ko01100,ko01110,map00010,map00052,map00460,map00500,map00940,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
PHMJEDCH_00323	7.34e-86	nin	-	-	S	-	-	-	Competence protein J (ComJ)
PHMJEDCH_00324	2.67e-101	nucA	-	-	M	-	-	-	Deoxyribonuclease NucA/NucB
PHMJEDCH_00325	7.04e-121	hxlB	5.3.1.27	-	G	ko:K08094	ko00030,ko00680,ko01100,ko01120,ko01200,ko01230,map00030,map00680,map01100,map01120,map01200,map01230	ko00000,ko00001,ko00002,ko01000	SIS domain
PHMJEDCH_00326	6.52e-132	hxlA	4.1.2.43	-	G	ko:K08093	ko00030,ko00680,ko01100,ko01120,ko01200,ko01230,map00030,map00680,map01100,map01120,map01200,map01230	ko00000,ko00001,ko00002,ko01000	3-hexulose-6-phosphate synthase
PHMJEDCH_00327	2.89e-84	hxlR	-	-	K	-	-	-	transcriptional
PHMJEDCH_00328	0.0	srfAA	-	-	Q	ko:K15654,ko:K15655,ko:K16119	ko01054,ko02024,map01054,map02024	ko00000,ko00001,ko01008	Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PHMJEDCH_00329	0.0	srfAB	-	-	Q	ko:K15654,ko:K15655,ko:K16120	ko01054,ko02024,map01054,map02024	ko00000,ko00001,ko01008	Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PHMJEDCH_00330	0.0	srfAC	-	-	Q	ko:K15656,ko:K16121	ko01054,ko02024,map01054,map02024	ko00000,ko00001,ko01008	COG1020 Non-ribosomal peptide synthetase modules and related proteins
PHMJEDCH_00331	1.34e-174	srfAD	-	-	Q	ko:K15657	ko02024,map02024	ko00000,ko00001,ko01008	thioesterase
PHMJEDCH_00332	5.89e-314	-	-	-	E	-	-	-	Aminotransferase class I and II
PHMJEDCH_00333	1.75e-156	sfp	-	-	H	ko:K06133	ko00770,map00770	ko00000,ko00001,ko01000	Belongs to the P-Pant transferase superfamily
PHMJEDCH_00334	1.12e-137	yczE	-	-	S	ko:K07149	-	ko00000	membrane
PHMJEDCH_00335	9.29e-168	tcyC	-	-	E	ko:K10010	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	COG1126 ABC-type polar amino acid transport system, ATPase component
PHMJEDCH_00336	5.85e-152	tcyB	-	-	P	ko:K10009	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG0765 ABC-type amino acid transport system, permease component
PHMJEDCH_00337	3.82e-185	tcyA	-	-	ET	ko:K02424	ko02010,map02010	ko00000,ko00001,ko00002,ko02000,ko02035	Belongs to the bacterial solute-binding protein 3 family
PHMJEDCH_00338	3.54e-198	yclA	-	-	K	ko:K21755	-	ko00000,ko03000	LysR substrate binding domain
PHMJEDCH_00339	3.44e-130	ubiX	2.5.1.129	-	H	ko:K03186	ko00130,ko00627,ko00940,ko01100,ko01110,ko01120,ko01220,map00130,map00627,map00940,map01100,map01110,map01120,map01220	ko00000,ko00001,ko00002,ko01000	Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN
PHMJEDCH_00340	0.0	yclC	4.1.1.61, 4.1.1.98	-	H	ko:K01612,ko:K03182,ko:K16874	ko00130,ko00365,ko00627,ko01100,ko01110,ko01120,ko01220,map00130,map00365,map00627,map01100,map01110,map01120,map01220	ko00000,ko00001,ko00002,ko01000	Decarboxylase involved in the decarboxylation and detoxification of phenolic derivatives under both aerobic and anaerobic conditions. It is able to catalyze the reversible decarboxylation of 4-hydroxybenzoate
PHMJEDCH_00341	6.46e-49	-	4.1.1.61	-	S	ko:K21759	ko00627,ko01120,ko01220,map00627,map01120,map01220	ko00000,ko00001,ko01000	response to toxic substance
PHMJEDCH_00342	8.93e-96	yclD	-	-	-	-	-	-	-
PHMJEDCH_00343	0.0	dtpT	-	-	E	ko:K03305	-	ko00000	amino acid peptide transporter
PHMJEDCH_00344	0.0	yclG	-	-	M	-	-	-	Pectate lyase superfamily protein
PHMJEDCH_00346	0.0	gerKA	-	-	EG	ko:K06295	-	ko00000	Spore germination protein
PHMJEDCH_00347	1.87e-289	gerKC	-	-	S	ko:K06297	-	ko00000	spore germination
PHMJEDCH_00348	5.7e-243	gerKB	-	-	F	ko:K06296	-	ko00000,ko02000	Spore germination protein
PHMJEDCH_00349	8.5e-316	yxeK	-	-	C	-	-	-	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
PHMJEDCH_00350	2.47e-117	yxeL	-	-	K	-	-	-	COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PHMJEDCH_00351	2.27e-176	yxeM	-	-	M	ko:K16961	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the bacterial solute-binding protein 3 family
PHMJEDCH_00352	1.22e-147	yxeN	-	-	P	ko:K10009,ko:K16962	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG0765 ABC-type amino acid transport system, permease component
PHMJEDCH_00353	4.6e-169	yxeO	-	-	P	ko:K16960,ko:K16963	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
PHMJEDCH_00354	7.36e-272	yxeP	-	-	E	ko:K21613	-	ko00000,ko01000,ko01002	hydrolase activity
PHMJEDCH_00355	1.72e-303	yxeQ	-	-	S	-	-	-	MmgE/PrpD family
PHMJEDCH_00356	1.23e-153	yclH	-	-	P	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter
PHMJEDCH_00357	4.84e-300	yclI	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter (permease) YclI
PHMJEDCH_00358	2.5e-162	yclJ	-	-	T	ko:K02483	-	ko00000,ko02022	COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PHMJEDCH_00359	0.0	yclK	-	-	T	-	-	-	COG0642 Signal transduction histidine kinase
PHMJEDCH_00360	4.37e-97	rapA1	-	-	S	ko:K06359,ko:K06361	ko02024,map02024	ko00000,ko00001,ko01000	aspartate phosphatase
PHMJEDCH_00363	1.28e-315	lysC	2.7.2.4	-	E	ko:K00928	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the aspartokinase family
PHMJEDCH_00364	1.06e-208	yclN	-	-	P	ko:K02015	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PHMJEDCH_00365	1.4e-212	yclO	-	-	P	ko:K02015	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PHMJEDCH_00366	1.55e-173	yclP	3.6.3.34	-	P	ko:K02013	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
PHMJEDCH_00367	1.67e-220	yclQ	-	-	P	ko:K02016	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG4607 ABC-type enterochelin transport system, periplasmic component
PHMJEDCH_00368	1.98e-313	ycnB	-	-	EGP	-	-	-	the major facilitator superfamily
PHMJEDCH_00369	4.78e-192	ycnC	-	-	K	-	-	-	Transcriptional regulator
PHMJEDCH_00370	2.68e-172	-	1.5.1.39	-	C	ko:K10678,ko:K19286	ko00633,ko00740,ko01100,ko01120,map00633,map00740,map01100,map01120	ko00000,ko00001,ko01000	Nitroreductase family
PHMJEDCH_00371	2.79e-59	ycnE	-	-	S	-	-	-	Monooxygenase
PHMJEDCH_00372	1.08e-67	yczG	-	-	K	-	-	-	helix_turn_helix, Arsenical Resistance Operon Repressor
PHMJEDCH_00373	0.0	gabR	-	-	K	ko:K00375	-	ko00000,ko03000	COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
PHMJEDCH_00374	3.02e-278	gabT	2.6.1.19, 2.6.1.22	-	E	ko:K00823,ko:K07250	ko00250,ko00280,ko00410,ko00640,ko00650,ko01100,ko01120,map00250,map00280,map00410,map00640,map00650,map01100,map01120	ko00000,ko00001,ko00002,ko01000,ko01007	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
PHMJEDCH_00375	0.0	gabD	1.2.1.16, 1.2.1.20, 1.2.1.79	-	C	ko:K00135	ko00250,ko00310,ko00350,ko00650,ko00760,ko01100,ko01120,map00250,map00310,map00350,map00650,map00760,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of malonate semialdehyde (MSA) and methylmalonate semialdehyde (MMSA) into acetyl-CoA and propanoyl-CoA, respectively
PHMJEDCH_00376	3.93e-189	glcU	-	-	U	ko:K05340	-	ko00000,ko02000	Glucose uptake
PHMJEDCH_00377	3.14e-182	gdh	1.1.1.47	-	IQ	ko:K00034	ko00030,ko01120,ko01200,map00030,map01120,map01200	ko00000,ko00001,ko01000	COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PHMJEDCH_00378	6.58e-128	ycnI	-	-	S	-	-	-	protein conserved in bacteria
PHMJEDCH_00379	0.0	ycnJ	-	-	P	ko:K14166	-	ko00000,ko02000	protein, homolog of Cu resistance protein CopC
PHMJEDCH_00380	3.23e-133	ycnK	-	-	K	ko:K21601	-	ko00000,ko03000	COG1349 Transcriptional regulators of sugar metabolism
PHMJEDCH_00381	6.5e-71	-	-	-	-	-	-	-	-
PHMJEDCH_00382	0.0	mtlA	2.7.1.197	-	G	ko:K02799,ko:K02800	ko00051,ko02060,map00051,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	COG2213 Phosphotransferase system, mannitol-specific IIBC component
PHMJEDCH_00383	1.96e-93	mtlF	2.7.1.197	-	G	ko:K02798	ko00051,ko02060,map00051,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	COG4668 Mannitol fructose-specific phosphotransferase system, IIA domain
PHMJEDCH_00384	8.36e-257	mtlD	1.1.1.17	-	G	ko:K00009	ko00051,map00051	ko00000,ko00001,ko01000	COG0246 Mannitol-1-phosphate altronate dehydrogenases
PHMJEDCH_00385	5.81e-78	ycsD	4.2.1.59	-	I	ko:K02372	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	FabA-like domain
PHMJEDCH_00387	2.59e-175	ycsE	3.1.3.104	-	S	ko:K21064	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Sucrose-6F-phosphate phosphohydrolase
PHMJEDCH_00388	1.42e-170	ycsF	-	-	S	ko:K07160	-	ko00000	Belongs to the UPF0271 (lamB) family
PHMJEDCH_00389	6.98e-267	ycsG	-	-	P	-	-	-	COG1914 Mn2 and Fe2 transporters of the NRAMP family
PHMJEDCH_00390	3.25e-181	ycsI	-	-	S	-	-	-	Belongs to the D-glutamate cyclase family
PHMJEDCH_00391	1.68e-168	kipI	-	-	E	ko:K06351	-	ko00000	Allophanate hydrolase subunit 1
PHMJEDCH_00392	5.16e-226	kipA	-	-	E	ko:K06350	-	ko00000	Allophanate hydrolase subunit 2
PHMJEDCH_00393	7.07e-162	kipR	-	-	K	-	-	-	Transcriptional regulator
PHMJEDCH_00394	9.77e-144	ycsK	-	-	E	-	-	-	anatomical structure formation involved in morphogenesis
PHMJEDCH_00396	6.7e-72	yczJ	-	-	S	-	-	-	biosynthesis
PHMJEDCH_00397	0.0	pbpC	3.4.16.4	-	M	ko:K02545,ko:K21467	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko00002,ko01000,ko01011,ko01504	Penicillin-binding Protein
PHMJEDCH_00398	7.28e-212	ycsN	-	-	S	-	-	-	Oxidoreductase
PHMJEDCH_00399	0.0	mtlR	-	-	K	ko:K03483	-	ko00000,ko03000	transcriptional regulator, MtlR
PHMJEDCH_00400	0.0	ydaB	-	-	IQ	-	-	-	acyl-CoA ligase
PHMJEDCH_00401	6.33e-182	ydaD	-	-	IQ	-	-	-	COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PHMJEDCH_00402	1.08e-122	ydaE	5.3.1.15	-	S	ko:K09988	ko00040,map00040	ko00000,ko00001,ko01000	Cupin 2, conserved barrel domain protein
PHMJEDCH_00403	1.58e-146	ydaF	-	-	J	ko:K03817	-	ko00000,ko01000,ko03009	COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins
PHMJEDCH_00404	4.32e-100	ydaG	-	-	S	-	-	-	general stress protein
PHMJEDCH_00405	9.89e-174	amj	-	-	U	-	-	-	Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane
PHMJEDCH_00406	2.67e-62	ydzA	-	-	EGP	-	-	-	Domain of unknown function (DUF3817)
PHMJEDCH_00407	3.25e-97	lrpC	-	-	K	ko:K03719	-	ko00000,ko03000,ko03036	Transcriptional regulator
PHMJEDCH_00408	0.0	topB	5.99.1.2	-	L	ko:K03169	-	ko00000,ko01000,ko03032	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
PHMJEDCH_00409	7.77e-240	ydaJ	-	-	M	-	-	-	Belongs to the glycosyl hydrolase 8 (cellulase D) family
PHMJEDCH_00410	4.73e-183	ydaK	-	-	T	-	-	-	Diguanylate cyclase, GGDEF domain
PHMJEDCH_00411	0.0	ydaL	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2334)
PHMJEDCH_00412	4.51e-182	ydaM	-	-	M	-	-	-	Glycosyl transferase family group 2
PHMJEDCH_00413	1.54e-67	ydaM	-	-	M	-	-	-	Glycosyl transferase family group 2
PHMJEDCH_00414	0.0	ydaN	-	-	S	-	-	-	Bacterial cellulose synthase subunit
PHMJEDCH_00415	0.0	ydaO	-	-	E	-	-	-	amino acid
PHMJEDCH_00416	0.0	ydaP	1.2.3.3	-	EH	ko:K00158	ko00620,ko01100,map00620,map01100	ko00000,ko00001,ko01000	Belongs to the TPP enzyme family
PHMJEDCH_00417	5.03e-80	-	-	-	K	-	-	-	acetyltransferase
PHMJEDCH_00418	7.58e-111	yycO	-	-	S	-	-	-	Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family
PHMJEDCH_00419	1.04e-83	-	-	-	-	-	-	-	-
PHMJEDCH_00420	1.77e-235	-	-	-	S	ko:K06366	ko02024,map02024	ko00000,ko00001,ko01000	Histidine kinase
PHMJEDCH_00423	1.06e-53	-	-	-	-	-	-	-	-
PHMJEDCH_00424	1.47e-285	mntH	-	-	P	ko:K03322	-	ko00000,ko02000	H( )-stimulated, divalent metal cation uptake system
PHMJEDCH_00426	3.94e-45	ydaT	-	-	-	-	-	-	-
PHMJEDCH_00427	6.73e-97	yvaD	-	-	S	-	-	-	Family of unknown function (DUF5360)
PHMJEDCH_00428	2.18e-68	yvaE	-	-	P	ko:K03297	-	ko00000,ko02000	Small Multidrug Resistance protein
PHMJEDCH_00429	3.49e-172	ydbA	-	-	P	-	-	-	EcsC protein family
PHMJEDCH_00430	2.55e-07	gsiB	-	-	S	ko:K06884	-	ko00000	general stress protein
PHMJEDCH_00431	3.48e-74	ydbB	-	-	G	-	-	-	Cupin domain
PHMJEDCH_00432	1.14e-76	ydbC	-	-	S	-	-	-	Domain of unknown function (DUF4937
PHMJEDCH_00433	2.61e-196	ydbD	-	-	P	ko:K07217	-	ko00000	Catalase
PHMJEDCH_00434	1.87e-246	dctB	-	-	G	-	-	-	COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component
PHMJEDCH_00435	0.0	dctS	2.7.13.3	-	T	ko:K11614,ko:K11637,ko:K11691	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Signal transduction histidine kinase regulating citrate malate metabolism
PHMJEDCH_00436	4.6e-147	dctR	-	-	T	ko:K02475,ko:K11692	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	COG4565 Response regulator of citrate malate metabolism
PHMJEDCH_00437	3.75e-285	dctA	-	-	U	ko:K03309,ko:K11102,ko:K11103	ko02020,map02020	ko00000,ko00001,ko02000	Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
PHMJEDCH_00438	1.31e-225	ydbI	-	-	S	-	-	-	AI-2E family transporter
PHMJEDCH_00439	7e-214	ydbJ	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PHMJEDCH_00440	9.52e-165	ydbK	-	-	S	ko:K01992	-	ko00000,ko00002,ko02000	COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component
PHMJEDCH_00441	1.32e-69	ydbL	-	-	-	-	-	-	-
PHMJEDCH_00442	4.74e-257	ydbM	-	-	I	-	-	-	acyl-CoA dehydrogenase
PHMJEDCH_00443	2.36e-17	-	-	-	S	-	-	-	Fur-regulated basic protein B
PHMJEDCH_00444	6.11e-15	-	-	-	S	-	-	-	Fur-regulated basic protein A
PHMJEDCH_00445	9.92e-161	yeaB	-	-	P	-	-	-	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
PHMJEDCH_00446	2.25e-74	ydbP	-	-	CO	-	-	-	Thioredoxin
PHMJEDCH_00447	7.23e-257	ddl	6.3.2.4	-	F	ko:K01921	ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Belongs to the D-alanine--D-alanine ligase family
PHMJEDCH_00448	0.0	murF	6.3.2.10	-	M	ko:K01929	ko00300,ko00550,ko01100,ko01502,map00300,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
PHMJEDCH_00449	0.0	cshA	3.6.4.13	-	JKL	ko:K05592	ko03018,map03018	ko00000,ko00001,ko01000,ko03009,ko03019	DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
PHMJEDCH_00450	6.7e-93	ydbS	-	-	S	ko:K09167	-	ko00000	Bacterial PH domain
PHMJEDCH_00451	0.0	ydbT	-	-	S	ko:K08981	-	ko00000	Membrane
PHMJEDCH_00452	8.15e-136	ydcA	-	-	S	-	-	-	membrane protein (homolog of Drosophila rhomboid)
PHMJEDCH_00453	4.96e-72	acpS	2.7.8.7	-	I	ko:K00997	ko00770,map00770	ko00000,ko00001,ko01000	Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
PHMJEDCH_00454	1.18e-230	ydcC	-	-	M	-	-	-	COG2834 Outer membrane lipoprotein-sorting protein
PHMJEDCH_00455	3.01e-274	alr	5.1.1.1, 5.1.1.5	-	E	ko:K01775,ko:K20707	ko00473,ko01100,ko01502,map00473,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
PHMJEDCH_00456	6.68e-57	ndoAI	-	-	K	ko:K07723	-	ko00000,ko02048,ko03000	transcriptional regulators containing the CopG Arc MetJ DNA-binding domain and a metal-binding domain
PHMJEDCH_00457	4.34e-75	ndoA	-	-	L	ko:K07171	-	ko00000,ko01000,ko02048	Toxic component of a toxin-antitoxin (TA) module
PHMJEDCH_00458	9.89e-176	rsbR	-	-	T	ko:K17763	-	ko00000,ko03021	Positive regulator of sigma-B
PHMJEDCH_00459	1.09e-75	rsbS	-	-	T	ko:K17762	-	ko00000,ko03021	antagonist
PHMJEDCH_00460	5.79e-88	rsbT	2.7.11.1	-	T	ko:K17752	-	ko00000,ko01000,ko01001,ko03021	COG2172 Anti-sigma regulatory factor (Ser Thr protein kinase)
PHMJEDCH_00461	4.02e-238	rsbU	3.1.3.3	-	KT	ko:K07315	-	ko00000,ko01000,ko03021	phosphatase
PHMJEDCH_00462	3.28e-69	rsbV	-	-	T	ko:K04749	-	ko00000,ko03021	Belongs to the anti-sigma-factor antagonist family
PHMJEDCH_00463	5.84e-110	rsbW	2.7.11.1	-	F	ko:K04757	-	ko00000,ko01000,ko01001,ko03021	Negative regulator of sigma-B activity. Phosphorylates and inactivates its specific antagonist protein, RsbV. Upon phosphorylation of RsbV, RsbW is released and binds to sigma-B, thereby blocking its ability to form an RNA polymerase holoenzyme (E-sigma-B)
PHMJEDCH_00464	2.67e-179	sigB	-	-	K	ko:K03090	-	ko00000,ko03021	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
PHMJEDCH_00465	2.16e-136	rsbX	3.1.3.3	-	KT	ko:K05518	-	ko00000,ko01000,ko03021	Sigma factor PP2C-like phosphatases
PHMJEDCH_00466	0.0	tex	-	-	K	ko:K06959	-	ko00000	COG2183 Transcriptional accessory protein
PHMJEDCH_00467	1.78e-21	-	-	-	-	-	-	-	-
PHMJEDCH_00468	6.69e-104	ydcK	-	-	S	ko:K03095	-	ko00000	Belongs to the SprT family
PHMJEDCH_00476	1.06e-176	-	-	-	I	ko:K01066	-	ko00000,ko01000	esterase
PHMJEDCH_00477	3.54e-62	ohrB	-	-	O	-	-	-	OsmC-like protein
PHMJEDCH_00478	7.77e-65	ohrR	-	-	K	-	-	-	Transcriptional regulator
PHMJEDCH_00480	2.35e-213	ybfA	-	-	K	-	-	-	FR47-like protein
PHMJEDCH_00481	2.71e-286	ybfB	-	-	G	-	-	-	COG0477 Permeases of the major facilitator superfamily
PHMJEDCH_00482	2.06e-238	ydhT1	3.2.1.78	GH26	G	ko:K01218	ko00051,ko02024,map00051,map02024	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 26 family
PHMJEDCH_00483	9.99e-61	nicK	-	-	L	ko:K07467	-	ko00000	Replication initiation factor
PHMJEDCH_00486	3.96e-71	-	-	-	-	-	-	-	-
PHMJEDCH_00487	2.05e-100	-	-	-	K	-	-	-	Transcriptional regulator
PHMJEDCH_00488	6.03e-124	azoR	-	-	I	ko:K01118	-	ko00000,ko01000	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
PHMJEDCH_00489	3.05e-41	cspL	-	-	K	ko:K03704	-	ko00000,ko03000	Cold shock
PHMJEDCH_00490	3.21e-144	racX	5.1.1.13	-	M	ko:K01779	ko00250,ko01054,map00250,map01054	ko00000,ko00001,ko01000	Belongs to the aspartate glutamate racemases family
PHMJEDCH_00491	2.02e-131	-	-	-	S	-	-	-	Protein of unknown function (DUF2812)
PHMJEDCH_00492	9.59e-67	-	-	-	K	-	-	-	Transcriptional regulator PadR-like family
PHMJEDCH_00493	1.03e-302	-	-	-	K	-	-	-	COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
PHMJEDCH_00494	4.16e-240	ydeG	-	-	EGP	-	-	-	Major facilitator superfamily
PHMJEDCH_00495	4.07e-219	-	-	-	S	-	-	-	Patatin-like phospholipase
PHMJEDCH_00497	0.0	yvdP	-	-	C	-	-	-	COG0277 FAD FMN-containing dehydrogenases
PHMJEDCH_00498	6.38e-91	-	-	-	E	ko:K07032	-	ko00000	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PHMJEDCH_00499	7.27e-197	czcD	-	-	P	ko:K16264	-	ko00000,ko02000	COG1230 Co Zn Cd efflux system component
PHMJEDCH_00500	3.58e-201	-	-	-	S	-	-	-	SNARE associated Golgi protein
PHMJEDCH_00501	1.19e-124	yrkC	-	-	G	-	-	-	Cupin domain
PHMJEDCH_00502	1.75e-106	-	-	-	K	ko:K19273	-	ko00000,ko01000,ko01504	Acetyltransferase (GNAT) domain
PHMJEDCH_00503	1.73e-186	ydeE	-	-	K	ko:K13653	-	ko00000,ko03000	AraC family transcriptional regulator
PHMJEDCH_00505	1.4e-238	cfr	2.1.1.224	-	J	ko:K15632	-	ko00000,ko01000,ko01504,ko03009	Specifically methylates position 8 of adenine 2503 in 23S rRNA. Confers resistance to some classes of antibiotics
PHMJEDCH_00506	7.14e-63	ydeH	-	-	-	-	-	-	-
PHMJEDCH_00507	3.65e-206	-	-	-	S	-	-	-	Sodium Bile acid symporter family
PHMJEDCH_00508	1.96e-252	adhA	-	-	C	ko:K13979	-	ko00000,ko01000	alcohol dehydrogenase
PHMJEDCH_00509	3.59e-78	adhR	-	-	K	ko:K21745	-	ko00000,ko03000	helix_turn_helix, mercury resistance
PHMJEDCH_00510	6.33e-278	nhaC_1	-	-	C	-	-	-	antiporter
PHMJEDCH_00511	2.8e-315	-	-	-	K	ko:K00375	-	ko00000,ko03000	helix_turn_helix gluconate operon transcriptional repressor
PHMJEDCH_00512	5.2e-131	paiB	-	-	K	ko:K07734	-	ko00000,ko03000	Transcriptional regulator
PHMJEDCH_00513	3.52e-233	ydeR	-	-	EGP	-	-	-	Uncharacterised MFS-type transporter YbfB
PHMJEDCH_00514	1.18e-126	ydeS	-	-	K	-	-	-	Transcriptional regulator
PHMJEDCH_00515	4.24e-192	ydeK	-	-	EG	-	-	-	-transporter
PHMJEDCH_00516	1.8e-316	ydeL	-	-	K	ko:K00375	-	ko00000,ko03000	COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
PHMJEDCH_00517	1.16e-62	yraD	-	-	M	ko:K06439	-	ko00000	Spore coat protein
PHMJEDCH_00518	4.86e-33	yraE	-	-	-	ko:K06440	-	ko00000	-
PHMJEDCH_00519	3.98e-278	adhB	1.1.1.1, 1.1.1.284	-	E	ko:K00121	ko00010,ko00071,ko00350,ko00625,ko00626,ko00680,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01200,ko01220,ko05204,map00010,map00071,map00350,map00625,map00626,map00680,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01200,map01220,map05204	ko00000,ko00001,ko01000	COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases
PHMJEDCH_00520	4.76e-84	yraF	-	-	M	-	-	-	Spore coat protein
PHMJEDCH_00521	4.73e-47	yraG	-	-	-	ko:K06440	-	ko00000	-
PHMJEDCH_00522	6.26e-42	ydfJ	-	-	S	ko:K06994,ko:K11625	ko02020,map02020	ko00000,ko00001	drug exporters of the RND superfamily
PHMJEDCH_00523	3.37e-162	puuD	-	-	S	ko:K07010	-	ko00000,ko01002	Peptidase C26
PHMJEDCH_00524	0.0	expZ	-	-	S	ko:K18231	ko02010,map02010	br01600,ko00000,ko00001,ko01504,ko02000	ABC transporter
PHMJEDCH_00525	4.32e-117	ynaD	-	-	J	-	-	-	Acetyltransferase (GNAT) domain
PHMJEDCH_00526	1.67e-189	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2179)
PHMJEDCH_00527	3.1e-249	gldA	1.1.1.6	-	C	ko:K00005	ko00561,ko00640,ko01100,map00561,map00640,map01100	ko00000,ko00001,ko01000	COG0371 Glycerol dehydrogenase and related enzymes
PHMJEDCH_00528	4.16e-263	tcaB	-	-	EGP	ko:K07552	-	ko00000,ko02000	-transporter
PHMJEDCH_00529	4.68e-280	fabF_1	2.3.1.179	-	I	ko:K09458	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
PHMJEDCH_00530	7.19e-197	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
PHMJEDCH_00531	1.05e-156	ydhB	-	-	S	ko:K07090	-	ko00000	membrane transporter protein
PHMJEDCH_00532	2.24e-101	bltD	2.3.1.57	-	K	ko:K00657	ko00330,ko01100,ko04216,map00330,map01100,map04216	ko00000,ko00001,ko00002,ko01000	FR47-like protein
PHMJEDCH_00533	1.6e-181	bltR	-	-	K	-	-	-	helix_turn_helix, mercury resistance
PHMJEDCH_00534	3.72e-184	gmT1	-	-	EG	-	-	-	COG0697 Permeases of the drug metabolite transporter (DMT) superfamily
PHMJEDCH_00535	1.03e-141	yjhB	3.6.1.13	-	F	ko:K01515	ko00230,map00230	ko00000,ko00001,ko01000	ADP-ribose pyrophosphatase
PHMJEDCH_00536	4.97e-133	-	3.1.1.24	-	S	ko:K01055	ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220	ko00000,ko00001,ko00002,ko01000	Alpha/beta hydrolase family
PHMJEDCH_00537	1.24e-208	ycsA	1.1.1.83, 1.1.1.93, 4.1.1.73	-	CE	ko:K07246	ko00630,ko00650,map00630,map00650	ko00000,ko00001,ko01000	Tartrate dehydrogenase
PHMJEDCH_00538	1.47e-144	ydhC	-	-	K	-	-	-	FCD
PHMJEDCH_00539	2.91e-276	ydhE	-	-	CG	-	-	-	COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase
PHMJEDCH_00541	3.98e-311	pbpE	-	-	V	-	-	-	Beta-lactamase
PHMJEDCH_00543	5.02e-127	ydhK	-	-	M	-	-	-	Protein of unknown function (DUF1541)
PHMJEDCH_00544	1.24e-244	ydhL	-	-	EGP	ko:K18567	-	ko00000,ko02000	COG2814 Arabinose efflux permease
PHMJEDCH_00545	3.82e-167	ydhQ	-	-	K	ko:K03492	-	ko00000,ko03000	UTRA
PHMJEDCH_00546	1.12e-145	-	-	-	K	ko:K05799	-	ko00000,ko03000	FCD
PHMJEDCH_00547	1.35e-264	yycB1	-	-	P	ko:K03449	-	ko00000,ko02000	COG2807 Cyanate permease
PHMJEDCH_00548	2.88e-63	yvdR	-	-	P	ko:K11741	-	ko00000,ko02000	Small Multidrug Resistance protein
PHMJEDCH_00549	4.14e-63	yvdS	-	-	P	ko:K18924	-	ko00000,ko00002,ko02000	Small Multidrug Resistance protein
PHMJEDCH_00550	1.07e-128	yvdT_1	-	-	K	-	-	-	Transcriptional regulator
PHMJEDCH_00551	0.0	ybeC	-	-	E	-	-	-	amino acid
PHMJEDCH_00552	4.74e-209	ydhU	-	-	P	ko:K07217	-	ko00000	Catalase
PHMJEDCH_00553	2.82e-110	yndB	-	-	S	-	-	-	Activator of Hsp90 ATPase homolog 1-like protein
PHMJEDCH_00554	7.98e-228	yhfP	1.1.1.1	-	C	ko:K00001	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	Quinone oxidoreductase
PHMJEDCH_00555	4.86e-313	iolT	-	-	U	ko:K02100,ko:K06609	-	ko00000,ko02000	Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family
PHMJEDCH_00558	9.3e-53	-	-	-	S	-	-	-	COG NOG14552 non supervised orthologous group
PHMJEDCH_00561	4.4e-221	thiL	2.7.4.16	-	H	ko:K00946	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
PHMJEDCH_00562	1.44e-109	ydiB	-	-	S	ko:K06925	-	ko00000,ko03016	ATPase or kinase
PHMJEDCH_00563	2.69e-158	yeaZ	2.3.1.234	-	O	ko:K01409,ko:K14742	-	ko00000,ko01000,ko03016	COG1214 Inactive homolog of metal-dependent proteases
PHMJEDCH_00564	5.74e-108	rimI	2.3.1.128	-	K	ko:K03789	-	ko00000,ko01000,ko03009	This enzyme acetylates the N-terminal alanine of ribosomal protein S18
PHMJEDCH_00565	2.83e-239	tsaD	2.3.1.234	-	O	ko:K01409	-	ko00000,ko01000,ko03016	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
PHMJEDCH_00566	0.0	ydiF	-	-	S	ko:K06158	-	ko00000,ko03012	ABC transporter
PHMJEDCH_00567	2.95e-117	moaC	4.6.1.17	-	H	ko:K03637	ko00790,ko01100,ko04122,map00790,map01100,map04122	ko00000,ko00001,ko01000	Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP)
PHMJEDCH_00568	1.51e-148	rex	-	-	K	ko:K01926	-	ko00000,ko03000	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
PHMJEDCH_00569	1.72e-29	tatA	-	-	U	ko:K03116	ko03060,ko03070,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system
PHMJEDCH_00570	2.61e-157	tatC	-	-	U	ko:K03118	ko03060,ko03070,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
PHMJEDCH_00571	1.11e-37	ydiK	-	-	S	-	-	-	Domain of unknown function (DUF4305)
PHMJEDCH_00572	9.24e-162	ydiL	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
PHMJEDCH_00573	1.24e-57	groS	-	-	O	ko:K04078	-	ko00000,ko03029,ko03110	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
PHMJEDCH_00574	0.0	groL	-	-	O	ko:K04077	ko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
PHMJEDCH_00575	0.0	ykuG	-	-	M	-	-	-	Putative peptidoglycan binding domain
PHMJEDCH_00577	2.21e-81	-	-	-	-	-	-	-	-
PHMJEDCH_00578	0.0	gutR	-	-	K	ko:K16247	-	ko00000,ko03000	NB-ARC domain
PHMJEDCH_00579	6.58e-253	gutB	1.1.1.14	-	E	ko:K00008	ko00040,ko00051,ko01100,map00040,map00051,map01100	ko00000,ko00001,ko00002,ko01000	Dehydrogenase
PHMJEDCH_00580	6.05e-290	gutP	-	-	G	ko:K03292,ko:K16248	-	ko00000,ko02000	MFS/sugar transport protein
PHMJEDCH_00581	1.93e-217	ydjE	2.7.1.4	-	G	ko:K00847	ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100	ko00000,ko00001,ko01000	pfkB family carbohydrate kinase
PHMJEDCH_00582	1.21e-39	yjdJ	-	-	S	-	-	-	Domain of unknown function (DUF4306)
PHMJEDCH_00583	4.36e-143	pspA	-	-	KT	ko:K03969	-	ko00000	Phage shock protein A
PHMJEDCH_00584	6.45e-222	ydjG	-	-	L	-	-	-	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
PHMJEDCH_00585	3.97e-156	ydjH	-	-	S	ko:K06872	-	ko00000	COG1512 Beta-propeller domains of methanol dehydrogenase type
PHMJEDCH_00586	4.64e-200	ydjI	-	-	S	-	-	-	virion core protein (lumpy skin disease virus)
PHMJEDCH_00587	0.0	oatA	-	-	I	-	-	-	Acyltransferase family
PHMJEDCH_00588	5.52e-184	rsiV	-	-	S	-	-	-	Protein of unknown function (DUF3298)
PHMJEDCH_00589	1.08e-112	sigV	-	-	K	ko:K03088	-	ko00000,ko03021	Belongs to the sigma-70 factor family. ECF subfamily
PHMJEDCH_00590	7.9e-246	ydjL	1.1.1.264, 1.1.1.303, 1.1.1.4	-	E	ko:K00004,ko:K00098	ko00650,map00650	ko00000,ko00001,ko01000	Dehydrogenase
PHMJEDCH_00591	7.91e-83	ydjM	-	-	M	-	-	-	Lytic transglycolase
PHMJEDCH_00592	1.51e-189	ydjN	-	-	U	-	-	-	Involved in the tonB-independent uptake of proteins
PHMJEDCH_00594	9.6e-47	ydjO	-	-	S	-	-	-	Cold-inducible protein YdjO
PHMJEDCH_00595	0.0	cotA	1.16.3.3	-	Q	ko:K06324	-	ko00000,ko01000	multicopper oxidases
PHMJEDCH_00596	2.56e-307	gabP	-	-	E	ko:K11735	-	ko00000,ko02000	COG1113 Gamma-aminobutyrate permease and related permeases
PHMJEDCH_00597	3.12e-192	yeaB	-	-	P	-	-	-	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
PHMJEDCH_00598	7.99e-226	yeaC	-	-	S	ko:K03924	-	ko00000,ko01000	COG0714 MoxR-like ATPases
PHMJEDCH_00599	1e-254	yeaD	-	-	S	-	-	-	conserved protein (some members contain a von Willebrand factor type A (vWA) domain)
PHMJEDCH_00600	0.0	yebA	-	-	E	-	-	-	COG1305 Transglutaminase-like enzymes
PHMJEDCH_00601	0.0	guaA	6.3.5.2	-	F	ko:K01951	ko00230,ko00983,ko01100,map00230,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko01002	Catalyzes the synthesis of GMP from XMP
PHMJEDCH_00602	3.03e-118	-	-	-	K	ko:K03088	-	ko00000,ko03021	Belongs to the sigma-70 factor family. ECF subfamily
PHMJEDCH_00603	8.71e-313	-	-	-	S	-	-	-	Domain of unknown function (DUF4179)
PHMJEDCH_00604	1.01e-268	pbuG	-	-	S	ko:K06901	-	ko00000,ko02000	permease
PHMJEDCH_00605	3.28e-163	yebC	-	-	M	-	-	-	Membrane
PHMJEDCH_00607	7.62e-120	yebE	-	-	S	-	-	-	UPF0316 protein
PHMJEDCH_00608	7.68e-39	yebG	-	-	S	-	-	-	NETI protein
PHMJEDCH_00609	1.87e-107	purE	5.4.99.18	-	F	ko:K01588	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
PHMJEDCH_00610	2.42e-282	purK	6.3.4.18	-	F	ko:K01589	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
PHMJEDCH_00611	1.05e-313	purB	4.3.2.2	-	F	ko:K01756	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
PHMJEDCH_00612	2.2e-162	purC	6.3.2.6	-	F	ko:K01923	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the SAICAR synthetase family
PHMJEDCH_00613	8.96e-51	purS	6.3.5.3	-	F	ko:K01952	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PHMJEDCH_00614	6.14e-163	purQ	6.3.5.3	-	F	ko:K01952	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PHMJEDCH_00615	0.0	purL	6.3.5.3	-	F	ko:K01952	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PHMJEDCH_00616	0.0	purF	2.4.2.14	-	F	ko:K00764	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko01002	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
PHMJEDCH_00617	4.2e-241	purM	6.3.3.1	-	F	ko:K01933	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Phosphoribosylformylglycinamidine cyclo-ligase
PHMJEDCH_00618	3.89e-132	purN	2.1.2.2	-	F	ko:K11175	ko00230,ko00670,ko01100,ko01110,ko01130,map00230,map00670,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
PHMJEDCH_00619	0.0	purH	2.1.2.3, 3.5.4.10	-	F	ko:K00602	ko00230,ko00670,ko01100,ko01110,ko01130,ko01523,map00230,map00670,map01100,map01110,map01130,map01523	ko00000,ko00001,ko00002,ko01000,ko04147	Bifunctional purine biosynthesis protein PurH
PHMJEDCH_00620	7.41e-294	purD	6.3.4.13	-	F	ko:K01945	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the GARS family
PHMJEDCH_00621	4.48e-81	-	-	-	K	-	-	-	helix_turn_helix ASNC type
PHMJEDCH_00622	3.96e-173	-	-	-	E	ko:K16263	-	ko00000,ko02000	Amino acid permease
PHMJEDCH_00623	2.05e-33	-	-	-	S	-	-	-	Protein of unknown function (DUF2892)
PHMJEDCH_00624	0.0	yerA	3.5.4.2	-	F	ko:K01486	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000	adenine deaminase
PHMJEDCH_00625	2.74e-243	yerB	-	-	S	-	-	-	Protein of unknown function (DUF3048) C-terminal domain
PHMJEDCH_00626	2.03e-67	yerC	-	-	S	-	-	-	protein conserved in bacteria
PHMJEDCH_00627	0.0	yerD	1.4.7.1	-	E	ko:K00284	ko00630,ko00910,ko01120,map00630,map00910,map01120	ko00000,ko00001,ko01000	Belongs to the glutamate synthase family
PHMJEDCH_00628	5.04e-163	pcrB	-	-	I	ko:K07094	-	ko00000,ko01000	35 carbon atoms) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P), producing heptaprenylglyceryl phosphate (HepGP). This reaction is an ether-bond-formation step in the biosynthesis of archaea-type G1P-based membrane lipids found in Bacillales
PHMJEDCH_00629	0.0	pcrA	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	ATP-dependent DNA helicase
PHMJEDCH_00630	0.0	ligA	6.5.1.2	-	L	ko:K01972	ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430	ko00000,ko00001,ko01000,ko03032,ko03400	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
PHMJEDCH_00631	1.59e-285	camS	-	-	S	-	-	-	COG4851 Protein involved in sex pheromone biosynthesis
PHMJEDCH_00632	6.11e-231	yerI	-	-	S	-	-	-	homoserine kinase type II (protein kinase fold)
PHMJEDCH_00633	7.98e-156	sapB	-	-	S	ko:K07507	-	ko00000,ko02000	MgtC SapB transporter
PHMJEDCH_00634	0.0	putP	-	-	E	ko:K03307,ko:K11928	-	ko00000,ko02000	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
PHMJEDCH_00635	1.81e-60	gatC	6.3.5.6, 6.3.5.7	-	J	ko:K02435	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PHMJEDCH_00636	0.0	gatA	6.3.5.6, 6.3.5.7	-	J	ko:K02433	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
PHMJEDCH_00637	0.0	gatB	6.3.5.6, 6.3.5.7	-	J	ko:K02434	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PHMJEDCH_00638	1.01e-189	yerO	-	-	K	-	-	-	Transcriptional regulator
PHMJEDCH_00639	0.0	swrC	-	-	V	ko:K03296	-	ko00000	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PHMJEDCH_00640	8.56e-217	dagK	2.7.1.107	-	I	ko:K07029	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko01000	COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase
PHMJEDCH_00641	0.0	rlmCD	2.1.1.190	-	J	ko:K03215	-	ko00000,ko01000,ko03009	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PHMJEDCH_00642	0.0	-	-	-	L	ko:K09384	-	ko00000	Uncharacterized conserved protein (DUF2075)
PHMJEDCH_00643	2.88e-204	cylA	-	-	V	ko:K01990,ko:K09695,ko:K11050	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	AAA domain, putative AbiEii toxin, Type IV TA system
PHMJEDCH_00644	3.92e-175	cylB	-	-	V	ko:K11051	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC-2 type transporter
PHMJEDCH_00645	5.92e-51	-	-	-	S	-	-	-	Protein of unknown function, DUF600
PHMJEDCH_00646	2.35e-73	-	-	-	S	-	-	-	Protein of unknown function, DUF600
PHMJEDCH_00647	2.48e-66	-	-	-	S	-	-	-	Protein of unknown function, DUF600
PHMJEDCH_00648	7.95e-256	-	-	-	L	ko:K21487	-	ko00000,ko01000,ko02048	nucleic acid phosphodiester bond hydrolysis
PHMJEDCH_00649	6.14e-152	-	-	-	L	ko:K21487	-	ko00000,ko01000,ko02048	Belongs to the WXG100 family
PHMJEDCH_00650	4.43e-162	yeeN	-	-	K	-	-	-	transcriptional regulatory protein
PHMJEDCH_00652	2.48e-138	aadK	-	-	G	ko:K05593	-	ko00000,ko01000,ko01504	Streptomycin adenylyltransferase
PHMJEDCH_00653	1.32e-60	cotJA	-	-	S	ko:K06332	-	ko00000	Spore coat associated protein JA (CotJA)
PHMJEDCH_00654	1.34e-60	cotJB	-	-	S	ko:K06333	-	ko00000	CotJB protein
PHMJEDCH_00655	4.26e-133	cotJC	-	-	P	ko:K06334	-	ko00000	Spore Coat
PHMJEDCH_00656	8e-114	yesJ	-	-	K	-	-	-	Acetyltransferase (GNAT) family
PHMJEDCH_00658	8.49e-146	yetF	-	-	S	-	-	-	membrane
PHMJEDCH_00659	3.06e-70	yetG	1.14.99.48	-	S	ko:K07145	ko00860,ko01110,map00860,map01110	ko00000,ko00001,ko01000	Antibiotic biosynthesis monooxygenase
PHMJEDCH_00660	2.87e-82	yetH	-	-	E	-	-	-	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PHMJEDCH_00661	2.4e-185	-	-	-	T	ko:K17763	-	ko00000,ko03021	COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)
PHMJEDCH_00662	7.84e-29	-	-	-	S	-	-	-	Uncharacterized small protein (DUF2292)
PHMJEDCH_00663	2.59e-73	-	-	-	H	-	-	-	riboflavin kinase activity
PHMJEDCH_00664	5.15e-135	yetJ	-	-	S	ko:K06890	-	ko00000	Belongs to the BI1 family
PHMJEDCH_00665	3.05e-110	yetL	-	-	K	-	-	-	helix_turn_helix multiple antibiotic resistance protein
PHMJEDCH_00666	2.58e-239	yetM	-	-	CH	-	-	-	FAD binding domain
PHMJEDCH_00667	2.78e-251	yetN	-	-	S	-	-	-	Protein of unknown function (DUF3900)
PHMJEDCH_00668	0.0	cypD	1.14.14.1, 1.6.2.4	-	C	ko:K14338	ko00071,ko00380,ko00627,ko01120,map00071,map00380,map00627,map01120	ko00000,ko00001,ko00199,ko01000	Belongs to the cytochrome P450 family
PHMJEDCH_00670	0.0	ltaS	2.7.8.20	-	M	ko:K19005	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Belongs to the LTA synthase family
PHMJEDCH_00671	1.4e-186	yfnH	2.7.7.33	-	JM	ko:K00978	ko00500,ko00520,ko01100,map00500,map00520,map01100	ko00000,ko00001,ko01000	Nucleotidyl transferase
PHMJEDCH_00672	5.59e-219	yfnG	4.2.1.45, 4.2.1.46	-	M	ko:K01709,ko:K01710	ko00520,ko00521,ko00523,ko00525,ko01055,ko01130,map00520,map00521,map00523,map00525,map01055,map01130	ko00000,ko00001,ko00002,ko01000	dehydratase
PHMJEDCH_00673	7.97e-222	yfnF	-	-	M	-	-	-	Nucleotide-diphospho-sugar transferase
PHMJEDCH_00674	6.55e-272	yfnE	-	-	S	-	-	-	Glycosyltransferase like family 2
PHMJEDCH_00675	5.43e-227	yfnD	-	-	M	-	-	-	Nucleotide-diphospho-sugar transferase
PHMJEDCH_00676	4.78e-272	fsr	-	-	P	ko:K08223	-	ko00000,ko02000	COG0477 Permeases of the major facilitator superfamily
PHMJEDCH_00677	2.1e-306	yfnA	-	-	E	ko:K03294	-	ko00000	amino acid
PHMJEDCH_00678	0.0	yfmT	1.2.1.3, 1.2.1.67	-	C	ko:K00128,ko:K21802	ko00010,ko00053,ko00071,ko00280,ko00310,ko00330,ko00340,ko00380,ko00410,ko00561,ko00620,ko00625,ko00627,ko00903,ko00981,ko01100,ko01110,ko01120,ko01130,map00010,map00053,map00071,map00280,map00310,map00330,map00340,map00380,map00410,map00561,map00620,map00625,map00627,map00903,map00981,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of malonate semialdehyde (MSA) and methylmalonate semialdehyde (MMSA) into acetyl-CoA and propanoyl-CoA, respectively
PHMJEDCH_00679	3.69e-165	yfmS	-	-	NT	-	-	-	chemotaxis protein
PHMJEDCH_00680	1.59e-210	yhxD	-	-	IQ	-	-	-	Enoyl-(Acyl carrier protein) reductase
PHMJEDCH_00681	2.8e-255	-	-	-	M	-	-	-	COG0463 Glycosyltransferases involved in cell wall biogenesis
PHMJEDCH_00682	0.0	yfmR	-	-	S	ko:K15738	-	ko00000,ko02000	COG0488 ATPase components of ABC transporters with duplicated ATPase domains
PHMJEDCH_00683	2.4e-88	yfmP	-	-	K	ko:K21902	-	ko00000,ko03000	transcriptional
PHMJEDCH_00684	3.06e-249	yfmO	-	-	EGP	ko:K08221	-	ko00000,ko02000	Major facilitator superfamily
PHMJEDCH_00685	0.0	yheS_1	-	-	S	-	-	-	COG0488 ATPase components of ABC transporters with duplicated ATPase domains
PHMJEDCH_00686	1.34e-259	yfmL	-	-	L	-	-	-	COG0513 Superfamily II DNA and RNA helicases
PHMJEDCH_00687	9.68e-231	yfmJ	-	-	S	ko:K07119	-	ko00000	N-terminal domain of oxidoreductase
PHMJEDCH_00688	9.83e-33	-	-	-	S	-	-	-	Protein of unknown function (DUF3212)
PHMJEDCH_00689	4.9e-76	yflT	-	-	S	-	-	-	Heat induced stress protein YflT
PHMJEDCH_00690	1.29e-298	pel	4.2.2.2	-	G	ko:K01728	ko00040,ko02024,map00040,map02024	ko00000,ko00001,ko01000	Pectate lyase
PHMJEDCH_00691	0.0	yflS	-	-	P	ko:K03319	-	ko00000	Sodium:sulfate symporter transmembrane region
PHMJEDCH_00695	7.31e-92	M1-820	-	-	Q	-	-	-	Collagen triple helix repeat (20 copies)
PHMJEDCH_00696	0.0	ywpD	-	-	T	-	-	-	Histidine kinase
PHMJEDCH_00697	4.78e-191	M1-574	-	-	T	-	-	-	Transcriptional regulatory protein, C terminal
PHMJEDCH_00698	0.0	-	-	-	M	-	-	-	cell wall anchor domain
PHMJEDCH_00699	5.54e-104	srtA	3.4.22.70	-	M	ko:K07284	-	ko00000,ko01000,ko01002,ko01011	Sortase family
PHMJEDCH_00700	0.0	citS	2.7.13.3	-	T	ko:K11614,ko:K11637,ko:K11691	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Signal transduction histidine kinase regulating citrate malate metabolism
PHMJEDCH_00701	4.96e-148	citT	-	-	T	ko:K11638	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	response regulator
PHMJEDCH_00702	1.36e-217	yflP	-	-	S	-	-	-	Tripartite tricarboxylate transporter family receptor
PHMJEDCH_00703	4.33e-282	citM	-	-	C	ko:K03300,ko:K11639	ko02020,map02020	ko00000,ko00001	Citrate transporter
PHMJEDCH_00704	3.39e-183	yflN	-	-	S	-	-	-	COG0491 Zn-dependent hydrolases, including glyoxylases
PHMJEDCH_00705	7.02e-269	nos	1.14.14.47	-	C	ko:K00491	ko00220,ko00330,ko01100,ko01110,map00220,map00330,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the NOS family. Bacterial NOS oxygenase subfamily
PHMJEDCH_00706	4.43e-56	acyP	3.6.1.7	-	C	ko:K01512	ko00620,ko00627,ko01120,map00620,map00627,map01120	ko00000,ko00001,ko01000	Belongs to the acylphosphatase family
PHMJEDCH_00707	1.9e-153	yflK	-	-	S	-	-	-	protein conserved in bacteria
PHMJEDCH_00708	5.84e-21	yflJ	-	-	S	-	-	-	Protein of unknown function (DUF2639)
PHMJEDCH_00709	5.69e-26	yflI	-	-	-	-	-	-	-
PHMJEDCH_00710	1.38e-65	yflH	-	-	S	-	-	-	Protein of unknown function (DUF3243)
PHMJEDCH_00711	1.05e-174	yflG	3.4.11.18	-	E	ko:K01265	-	ko00000,ko01000,ko01002	Methionine aminopeptidase
PHMJEDCH_00712	3.41e-313	nagE	2.7.1.193, 2.7.1.199	-	G	ko:K02802,ko:K02803,ko:K02804,ko:K20116,ko:K20117,ko:K20118	ko00010,ko00520,ko02060,map00010,map00520,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	COG1263 Phosphotransferase system IIC components, glucose maltose N-acetylglucosamine-specific
PHMJEDCH_00713	8.21e-97	yfmQ	-	-	S	-	-	-	Uncharacterised protein from bacillus cereus group
PHMJEDCH_00714	0.0	yflE	2.7.8.20	-	M	ko:K19005	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Belongs to the LTA synthase family
PHMJEDCH_00715	3.87e-80	ydhN1	-	-	S	-	-	-	Domain of unknown function (DUF1992)
PHMJEDCH_00716	2.68e-100	cotP	-	-	O	ko:K13993	ko04141,map04141	ko00000,ko00001,ko03110	Belongs to the small heat shock protein (HSP20) family
PHMJEDCH_00717	6.73e-51	ydgA	-	-	S	-	-	-	Spore germination protein gerPA/gerPF
PHMJEDCH_00718	1.85e-53	ydgB	-	-	S	-	-	-	Spore germination protein gerPA/gerPF
PHMJEDCH_00719	7.43e-312	treP	2.7.1.201	-	G	ko:K02818,ko:K02819	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
PHMJEDCH_00720	0.0	treC	3.2.1.93	GH13	G	ko:K01226	ko00500,map00500	ko00000,ko00001,ko01000	COG0366 Glycosidases
PHMJEDCH_00721	2.03e-162	treR	-	-	K	ko:K03486	-	ko00000,ko03000	transcriptional
PHMJEDCH_00722	1.34e-154	frp	-	-	C	-	-	-	nitroreductase
PHMJEDCH_00723	1.06e-160	yibF	-	-	S	-	-	-	YibE/F-like protein
PHMJEDCH_00724	5.49e-235	yibE	-	-	S	-	-	-	YibE/F-like protein
PHMJEDCH_00725	0.0	cpdB	3.1.3.5, 3.1.3.6, 3.1.4.16, 3.6.1.45	-	F	ko:K01081,ko:K08693,ko:K11751	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	COG0737 5'-nucleotidase 2',3'-cyclic phosphodiesterase and related esterases
PHMJEDCH_00726	3.19e-117	yfkM	3.5.1.124	-	S	ko:K05520	-	ko00000,ko01000,ko01002	protease
PHMJEDCH_00727	2.99e-228	-	-	-	K	ko:K02529	-	ko00000,ko03000	helix_turn _helix lactose operon repressor
PHMJEDCH_00728	1.61e-205	aroE	1.1.1.25	-	E	ko:K00014	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
PHMJEDCH_00729	5.75e-165	aroD	4.2.1.10	-	E	ko:K03785	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis-dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3- dehydroshikimate
PHMJEDCH_00730	1.23e-245	-	-	-	EGP	-	-	-	COG0477 Permeases of the major facilitator superfamily
PHMJEDCH_00731	1.28e-39	yfkK	-	-	S	-	-	-	Belongs to the UPF0435 family
PHMJEDCH_00732	5.02e-105	yfkJ	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
PHMJEDCH_00733	4.68e-64	yfkI	-	-	S	-	-	-	gas vesicle protein
PHMJEDCH_00734	7.59e-183	yihY	-	-	S	ko:K07058	-	ko00000	Belongs to the UPF0761 family
PHMJEDCH_00735	3.65e-272	yfkF	-	-	EGP	-	-	-	COG0477 Permeases of the major facilitator superfamily
PHMJEDCH_00736	1.34e-235	cax	-	-	P	ko:K07300	-	ko00000,ko02000	COG0387 Ca2 H antiporter
PHMJEDCH_00737	3.01e-181	yfkD	-	-	S	-	-	-	YfkD-like protein
PHMJEDCH_00738	6.79e-185	yfkC	-	-	M	-	-	-	Mechanosensitive ion channel
PHMJEDCH_00739	1.09e-277	yfkA	-	-	S	-	-	-	YfkB-like domain
PHMJEDCH_00740	7.99e-37	yfjT	-	-	-	-	-	-	-
PHMJEDCH_00741	4.19e-197	pdaA	-	-	G	ko:K01567	-	ko00000,ko01000	deacetylase
PHMJEDCH_00742	3.41e-178	yfjR	-	-	I	-	-	-	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
PHMJEDCH_00744	5.27e-235	corA	-	-	P	ko:K03284	-	ko00000,ko02000	Mediates influx of magnesium ions
PHMJEDCH_00745	5.07e-201	yfjP	3.2.2.21	-	L	ko:K01247	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	COG0122 3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
PHMJEDCH_00746	0.0	rumA_1	2.1.1.190, 2.1.1.35	-	J	ko:K00557,ko:K03215	-	ko00000,ko01000,ko03009,ko03016	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PHMJEDCH_00747	3.87e-94	-	-	-	O	ko:K20486	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko01000,ko01002	Subtilase family
PHMJEDCH_00748	5.62e-307	lmrA	3.6.3.44	-	V	ko:K02021,ko:K18104	ko01501,ko02010,map01501,map02010	ko00000,ko00001,ko00002,ko01000,ko01504,ko02000	ABC transporter
PHMJEDCH_00749	0.0	-	-	-	KLT	-	-	-	Protein kinase domain
PHMJEDCH_00757	1.83e-60	-	-	-	S	-	-	-	YfzA-like protein
PHMJEDCH_00758	7.85e-241	yfjN	-	-	J	-	-	-	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PHMJEDCH_00759	2.86e-102	yfjM	-	-	S	-	-	-	Psort location Cytoplasmic, score
PHMJEDCH_00760	2.95e-239	acoA	-	-	C	ko:K21416	-	ko00000,ko01000	COG1071 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit
PHMJEDCH_00761	9.85e-238	acoB	-	-	C	ko:K21417	-	ko00000,ko01000	COG0022 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit
PHMJEDCH_00762	7.82e-265	acoC	2.3.1.12	-	C	ko:K00627	ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
PHMJEDCH_00763	3.32e-302	acoL	1.8.1.4	-	C	ko:K00382	ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000,ko04147	COG1249 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes
PHMJEDCH_00764	0.0	acoR	-	-	KQ	ko:K21405	-	ko00000,ko03000	COG3284 Transcriptional activator of acetoin glycerol metabolism
PHMJEDCH_00765	3.29e-22	sspH	-	-	S	ko:K06425	-	ko00000	Belongs to the SspH family
PHMJEDCH_00766	0.0	malH	3.2.1.122	GH4	G	ko:K01232	ko00500,map00500	ko00000,ko00001,ko01000	COG1486 Alpha-galactosidases 6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases
PHMJEDCH_00767	3.67e-177	glvR	-	-	F	ko:K03481	-	ko00000,ko03000	Helix-turn-helix domain, rpiR family
PHMJEDCH_00768	0.0	glvC	2.7.1.208	-	G	ko:K02749,ko:K02750	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
PHMJEDCH_00769	0.0	-	-	-	M	-	-	-	Peptidase_G2, IMC autoproteolytic cleavage domain
PHMJEDCH_00770	0.0	yfiB3	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter
PHMJEDCH_00771	0.0	yfiC3	-	-	V	ko:K06147	-	ko00000,ko02000	COG1132 ABC-type multidrug transport system, ATPase and permease components
PHMJEDCH_00772	7.86e-82	yfiD3	-	-	S	-	-	-	DoxX
PHMJEDCH_00773	5.91e-199	yfiE	1.13.11.2	-	S	ko:K07104	ko00361,ko00362,ko00622,ko00643,ko01100,ko01120,ko01220,map00361,map00362,map00622,map00643,map01100,map01120,map01220	ko00000,ko00001,ko00002,ko01000	glyoxalase
PHMJEDCH_00774	2.12e-99	ctaB	2.5.1.141	-	O	ko:K02257	ko00190,ko00860,ko01100,ko01110,ko04714,map00190,map00860,map01100,map01110,map04714	ko00000,ko00001,ko00002,ko01000,ko01006,ko03029	Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group
PHMJEDCH_00775	1.49e-89	ctaB	2.5.1.141	-	O	ko:K02257	ko00190,ko00860,ko01100,ko01110,ko04714,map00190,map00860,map01100,map01110,map04714	ko00000,ko00001,ko00002,ko01000,ko01006,ko03029	Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group
PHMJEDCH_00776	1e-119	padR	-	-	K	-	-	-	transcriptional
PHMJEDCH_00777	1.83e-128	-	1.6.5.2	-	S	ko:K00355	ko00130,ko01110,ko05200,ko05225,ko05418,map00130,map01110,map05200,map05225,map05418	ko00000,ko00001,ko01000	NADPH-dependent FMN reductase
PHMJEDCH_00778	2.39e-223	yfiQ	-	-	G	ko:K21462	-	ko00000	COG3936 Protein involved in polysaccharide intercellular adhesin (PIA) synthesis biofilm formation
PHMJEDCH_00779	1.37e-59	yrdF	-	-	K	ko:K03623	-	ko00000	ribonuclease inhibitor
PHMJEDCH_00780	2.04e-122	yfiT	-	-	S	-	-	-	Belongs to the metal hydrolase YfiT family
PHMJEDCH_00781	0.0	yfiU	-	-	EGP	-	-	-	the major facilitator superfamily
PHMJEDCH_00782	1.48e-103	yfiV	-	-	K	-	-	-	transcriptional
PHMJEDCH_00783	0.0	mprF	2.3.2.3	-	S	ko:K14205	ko01503,ko02020,ko05150,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01000,ko01504	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
PHMJEDCH_00784	1.27e-193	yfhB	-	-	S	-	-	-	PhzF family
PHMJEDCH_00785	3.09e-133	yfhC	-	-	C	-	-	-	nitroreductase
PHMJEDCH_00786	6.01e-33	yfhD	-	-	S	-	-	-	YfhD-like protein
PHMJEDCH_00788	3.2e-210	yfhF	-	-	S	ko:K07071	-	ko00000	nucleoside-diphosphate sugar epimerase
PHMJEDCH_00789	1.95e-177	recX	-	-	S	ko:K03565	-	ko00000,ko03400	Modulates RecA activity
PHMJEDCH_00790	3.93e-61	yfhH	-	-	S	-	-	-	Protein of unknown function (DUF1811)
PHMJEDCH_00791	1.93e-266	yfhI	-	-	EGP	-	-	-	-transporter
PHMJEDCH_00793	1.4e-206	mpr	-	-	M	-	-	-	Belongs to the peptidase S1B family
PHMJEDCH_00794	1.49e-58	yfhJ	-	-	S	-	-	-	WVELL protein
PHMJEDCH_00795	1.14e-112	yfhK	-	-	T	-	-	-	Bacterial SH3 domain homologues
PHMJEDCH_00796	2.82e-48	yfhL	-	-	S	-	-	-	SdpI/YhfL protein family
PHMJEDCH_00797	6.02e-213	-	-	-	S	-	-	-	Alpha/beta hydrolase family
PHMJEDCH_00798	6.4e-235	csbB	-	GT2	M	ko:K20534	-	ko00000,ko01000,ko01005,ko02000	COG0463 Glycosyltransferases involved in cell wall biogenesis
PHMJEDCH_00799	0.0	yfhO	-	-	S	-	-	-	Bacterial membrane protein YfhO
PHMJEDCH_00800	4.29e-229	yfhP	-	-	S	ko:K07038	-	ko00000	membrane-bound metal-dependent
PHMJEDCH_00801	1.99e-257	mutY	-	-	L	ko:K03575	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	A G-specific
PHMJEDCH_00802	1.73e-169	fabL	1.3.1.104	-	IQ	ko:K10780	ko00061,ko01100,ko01212,map00061,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PHMJEDCH_00803	9.58e-06	sspE	-	-	S	ko:K06422	-	ko00000	Small, acid-soluble spore protein, gamma-type
PHMJEDCH_00804	1.4e-49	ygaB	-	-	S	-	-	-	YgaB-like protein
PHMJEDCH_00805	2.32e-135	ygaC	-	-	J	ko:K07586	-	ko00000	Belongs to the UPF0374 family
PHMJEDCH_00806	0.0	ygaD	-	-	V	ko:K11085	ko02010,map02010	ko00000,ko00001,ko01000,ko02000	ABC transporter
PHMJEDCH_00807	1.76e-237	ygaE	-	-	S	-	-	-	Membrane
PHMJEDCH_00808	1.27e-309	gsaB	5.4.3.8	-	H	ko:K01845	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	ko00000,ko00001,ko00002,ko01000,ko01007	Glutamate-1-semialdehyde aminotransferase
PHMJEDCH_00809	7.73e-109	bcp	1.11.1.15	-	O	ko:K03564	-	ko00000,ko01000	Peroxiredoxin
PHMJEDCH_00810	6.8e-104	perR	-	-	P	ko:K09825	-	ko00000,ko03000	Belongs to the Fur family
PHMJEDCH_00811	1.1e-73	ygzB	-	-	S	-	-	-	UPF0295 protein
PHMJEDCH_00812	2.08e-208	ygxA	-	-	S	-	-	-	Nucleotidyltransferase-like
PHMJEDCH_00813	9.3e-53	-	-	-	S	-	-	-	COG NOG14552 non supervised orthologous group
PHMJEDCH_00830	0.0	-	-	-	C	-	-	-	Na+/H+ antiporter family
PHMJEDCH_00831	2.38e-158	ygaJ	3.4.13.21	-	E	ko:K05995	-	ko00000,ko01000,ko01002	Belongs to the peptidase S51 family
PHMJEDCH_00832	0.0	thiC	4.1.99.17	-	H	ko:K03147	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
PHMJEDCH_00833	3.15e-313	ygaK	-	-	C	-	-	-	Berberine and berberine like
PHMJEDCH_00835	1.69e-291	oppA5	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	PFAM extracellular solute-binding protein family 5
PHMJEDCH_00836	2.33e-185	-	-	-	P	ko:K02033	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PHMJEDCH_00837	6.2e-162	-	-	-	EP	ko:K02034	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	COG1173 ABC-type dipeptide oligopeptide nickel transport systems, permease components
PHMJEDCH_00838	5.45e-170	oppD3	-	-	P	ko:K02031	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
PHMJEDCH_00839	5.17e-165	oppF9	-	-	E	ko:K02032	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
PHMJEDCH_00840	0.0	katA	1.11.1.6	-	P	ko:K03781	ko00380,ko00630,ko01110,ko01130,ko01200,ko04011,ko04016,ko04068,ko04146,ko04211,ko04212,ko04213,ko05014,map00380,map00630,map01110,map01130,map01200,map04011,map04016,map04068,map04146,map04211,map04212,map04213,map05014	ko00000,ko00001,ko00002,ko01000	serves to protect cells from the toxic effects of hydrogen peroxide
PHMJEDCH_00841	2.39e-227	-	-	-	S	ko:K07045	-	ko00000	Amidohydrolase
PHMJEDCH_00842	1.02e-176	ssuB	-	-	P	ko:K15555	ko00920,ko02010,map00920,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	COG1116 ABC-type nitrate sulfonate bicarbonate transport system, ATPase component
PHMJEDCH_00843	2.34e-218	ssuA	-	-	M	ko:K15553	ko00920,ko02010,map00920,map02010	ko00000,ko00001,ko00002,ko02000	Sulfonate ABC transporter
PHMJEDCH_00844	6.5e-183	ssuC	-	-	P	ko:K15554	ko00920,ko02010,map00920,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter (permease)
PHMJEDCH_00845	8.25e-271	ssuD	1.14.14.28, 1.14.14.5	-	C	ko:K04091,ko:K20938	ko00920,map00920	ko00000,ko00001,ko01000	Catalyzes the desulfonation of aliphatic sulfonates
PHMJEDCH_00847	1.62e-53	rpsN	-	-	J	ko:K02954	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PHMJEDCH_00848	2.4e-102	ygaO	-	-	-	-	-	-	-
PHMJEDCH_00849	5.45e-31	-	-	-	K	ko:K07729	-	ko00000,ko03000	Transcriptional regulator
PHMJEDCH_00851	1.34e-138	yhzB	-	-	S	-	-	-	B3/4 domain
PHMJEDCH_00852	2.14e-280	queG	1.17.99.6	-	C	ko:K18979	-	ko00000,ko01000,ko03016	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
PHMJEDCH_00853	8.37e-216	yhbB	-	-	S	-	-	-	Putative amidase domain
PHMJEDCH_00854	2.31e-110	cspR	2.1.1.207	-	J	ko:K03216	-	ko00000,ko01000,ko03016	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
PHMJEDCH_00855	3.35e-132	yhbD	-	-	K	-	-	-	Protein of unknown function (DUF4004)
PHMJEDCH_00856	2.51e-76	yhbE	-	-	M	-	-	-	COG1664 Integral membrane protein CcmA involved in cell shape determination
PHMJEDCH_00857	7.48e-85	yhbF	-	-	M	-	-	-	COG1664 Integral membrane protein CcmA involved in cell shape determination
PHMJEDCH_00858	1.23e-07	-	-	-	-	-	-	-	-
PHMJEDCH_00859	0.0	prkA	-	-	T	ko:K07180	-	ko00000	Ser protein kinase
PHMJEDCH_00860	2.12e-276	yhbH	-	-	S	ko:K09786	-	ko00000	Belongs to the UPF0229 family
PHMJEDCH_00861	5.43e-94	yhbI	-	-	K	ko:K15973	-	ko00000,ko03000	DNA-binding transcription factor activity
PHMJEDCH_00862	2.98e-130	yhbJ	-	-	V	-	-	-	COG1566 Multidrug resistance efflux pump
PHMJEDCH_00863	0.0	yhcA	-	-	EGP	ko:K03446	-	ko00000,ko00002,ko02000	the major facilitator superfamily
PHMJEDCH_00864	2.61e-128	wrbA	1.6.5.2	-	S	ko:K03809	ko00130,ko01110,map00130,map01110	ko00000,ko00001,ko01000	NADPH-dependent FMN reductase
PHMJEDCH_00865	1.03e-65	yhcC	-	-	-	-	-	-	-
PHMJEDCH_00866	7.54e-65	-	-	-	-	-	-	-	-
PHMJEDCH_00867	8.78e-77	yhcF	-	-	K	ko:K07979	-	ko00000,ko03000	Transcriptional regulator
PHMJEDCH_00868	3.78e-148	yhcG	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PHMJEDCH_00869	3.74e-212	yhcH	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PHMJEDCH_00870	1.87e-201	yhcI	-	-	S	ko:K01992	-	ko00000,ko00002,ko02000	COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component
PHMJEDCH_00871	7.28e-42	cspB	-	-	K	ko:K03704	-	ko00000,ko03000	'Cold-shock' DNA-binding domain
PHMJEDCH_00872	2.09e-165	metQ_3	-	-	M	ko:K02073	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the nlpA lipoprotein family
PHMJEDCH_00873	2.76e-230	yhcK	2.7.7.65	-	T	ko:K18967	-	ko00000,ko01000,ko02000	COG2199 FOG GGDEF domain
PHMJEDCH_00874	1.01e-290	tcyP	-	-	U	ko:K06956	-	ko00000	Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
PHMJEDCH_00875	9.03e-50	-	3.5.1.6, 3.5.1.87	-	E	ko:K06016	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	COG0624 Acetylornithine deacetylase Succinyl-diaminopimelate desuccinylase and related deacylases
PHMJEDCH_00876	6.23e-61	yhcM	-	-	-	-	-	-	-
PHMJEDCH_00877	2.12e-117	yhcN	-	-	S	-	-	-	Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ)
PHMJEDCH_00878	6.62e-198	yhcP	-	-	-	-	-	-	-
PHMJEDCH_00879	4.1e-147	yhcQ	-	-	M	-	-	-	Spore coat protein
PHMJEDCH_00880	0.0	yhcR	3.1.3.5, 3.1.3.6, 3.1.4.16	-	F	ko:K01081,ko:K01119,ko:K08693	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the 5'-nucleotidase family
PHMJEDCH_00881	3.17e-128	yhcS	3.4.22.70	-	M	ko:K07284	-	ko00000,ko01000,ko01002,ko01011	COG3764 Sortase (surface protein transpeptidase)
PHMJEDCH_00882	2.24e-207	rluA	5.4.99.23, 5.4.99.28, 5.4.99.29	-	J	ko:K06177,ko:K06180	-	ko00000,ko01000,ko03009,ko03016	Responsible for synthesis of pseudouridine from uracil
PHMJEDCH_00883	1.88e-83	yhcU	-	-	S	-	-	-	Family of unknown function (DUF5365)
PHMJEDCH_00884	5.88e-89	yhcV	-	-	S	-	-	-	COG0517 FOG CBS domain
PHMJEDCH_00885	1.33e-158	yhcW	-	-	S	ko:K07025	-	ko00000	hydrolase
PHMJEDCH_00886	0.0	yhcX	-	-	K	-	-	-	Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase
PHMJEDCH_00887	0.0	yhxA	-	-	E	-	-	-	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
PHMJEDCH_00888	3.35e-131	glpP	-	-	K	ko:K02443	-	ko00000,ko03000	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
PHMJEDCH_00889	2.6e-195	glpF	-	-	G	ko:K02440	-	ko00000,ko02000	Belongs to the MIP aquaporin (TC 1.A.8) family
PHMJEDCH_00890	0.0	glpK	2.7.1.30	-	C	ko:K00864	ko00561,ko01100,ko03320,ko04626,map00561,map01100,map03320,map04626	ko00000,ko00001,ko01000,ko04147	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
PHMJEDCH_00891	0.0	glpD	1.1.3.21, 1.1.5.3	-	C	ko:K00105,ko:K00111	ko00564,ko01110,map00564,map01110	ko00000,ko00001,ko01000	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
PHMJEDCH_00892	0.0	pgcA	5.4.2.2	-	G	ko:K01835	ko00010,ko00030,ko00052,ko00230,ko00500,ko00520,ko00521,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00052,map00230,map00500,map00520,map00521,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Phosphoglucomutase
PHMJEDCH_00893	3.71e-245	yhcY	2.7.13.3	-	T	ko:K02480	-	ko00000,ko01000,ko01001,ko02022	Histidine kinase
PHMJEDCH_00894	7.97e-139	yhcZ	-	-	K	ko:K02479	-	ko00000,ko02022	COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
PHMJEDCH_00895	3.01e-110	yhdA	1.7.1.6	-	S	ko:K03206	-	ko00000,ko01000	NADPH-dependent FMN reductase
PHMJEDCH_00896	1.16e-51	yhdB	-	-	S	-	-	-	YhdB-like protein
PHMJEDCH_00897	2.33e-68	yhdC	-	-	S	-	-	-	Protein of unknown function (DUF3889)
PHMJEDCH_00898	1.32e-279	lytF	-	CBM50	M	ko:K19220,ko:K19223,ko:K19224	-	ko00000,ko01000,ko01002,ko01011	COG1388 FOG LysM repeat
PHMJEDCH_00899	6.05e-93	nsrR	-	-	K	ko:K13771	ko05132,map05132	ko00000,ko00001,ko03000	Transcriptional regulator
PHMJEDCH_00900	5.72e-314	ygxB	-	-	M	-	-	-	Conserved TM helix
PHMJEDCH_00901	0.0	spoVR	-	-	S	ko:K06415	-	ko00000	Stage V sporulation protein R
PHMJEDCH_00902	0.0	phoB	3.1.3.1	-	P	ko:K01077	ko00730,ko00790,ko01100,ko02020,map00730,map00790,map01100,map02020	ko00000,ko00001,ko00002,ko00537,ko01000,ko04147	Belongs to the alkaline phosphatase family
PHMJEDCH_00903	1.32e-165	lytE	-	CBM50	M	ko:K19220,ko:K19223,ko:K19224	-	ko00000,ko01000,ko01002,ko01011	COG1388 FOG LysM repeat
PHMJEDCH_00904	3.42e-201	citR	-	-	K	ko:K19242	-	ko00000,ko03000	Transcriptional regulator
PHMJEDCH_00905	8.91e-250	citA	2.3.3.1	-	C	ko:K01647	ko00020,ko00630,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map01100,map01110,map01120,map01130,map01200,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Belongs to the citrate synthase family
PHMJEDCH_00906	2.41e-200	yhdF	-	-	IQ	-	-	-	COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PHMJEDCH_00907	1.1e-311	yhdG	-	-	E	ko:K03294	-	ko00000	amino acid
PHMJEDCH_00908	4.63e-264	yhdH	-	-	S	ko:K03308	-	ko00000	Belongs to the sodium neurotransmitter symporter (SNF) (TC 2.A.22) family
PHMJEDCH_00909	8.62e-59	yhdK	-	-	S	-	-	-	Sigma-M inhibitor protein
PHMJEDCH_00910	2.03e-249	yhdL	-	-	S	-	-	-	Sigma factor regulator N-terminal
PHMJEDCH_00911	4.6e-113	sigM	-	-	K	ko:K03088	-	ko00000,ko03021	Belongs to the sigma-70 factor family. ECF subfamily
PHMJEDCH_00912	4.04e-136	plsC	2.3.1.51	-	I	ko:K00655	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family
PHMJEDCH_00913	4.4e-304	yhdP	-	-	S	-	-	-	COG1253 Hemolysins and related proteins containing CBS domains
PHMJEDCH_00914	2.3e-91	cueR	-	-	K	ko:K11923	-	ko00000,ko03000	transcriptional
PHMJEDCH_00915	2.3e-276	yhdR	2.6.1.1	-	E	ko:K11358	ko00220,ko00250,ko00270,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko01000,ko01007	Aminotransferase
PHMJEDCH_00916	7.35e-290	-	2.3.1.179	-	I	ko:K00646,ko:K09458	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004,ko01008	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
PHMJEDCH_00917	5.48e-314	yhdT	-	-	P	-	-	-	COG1253 Hemolysins and related proteins containing CBS domains
PHMJEDCH_00919	4.22e-71	crcB	-	-	D	ko:K06199	-	ko00000,ko02000	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PHMJEDCH_00920	3.77e-158	yhdW	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	glycerophosphoryl diester phosphodiesterase
PHMJEDCH_00921	1.45e-08	yhdX	-	-	S	-	-	-	Uncharacterized protein YhdX
PHMJEDCH_00922	1.54e-251	yhdY	-	-	M	ko:K16052	-	ko00000,ko02000	Mechanosensitive ion channel
PHMJEDCH_00923	7.42e-174	cobB	-	-	K	ko:K12410	-	ko00000,ko01000	NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form
PHMJEDCH_00924	3.96e-191	nodB1	-	-	G	-	-	-	deacetylase
PHMJEDCH_00925	6.34e-193	dat	2.6.1.21	-	E	ko:K00824	ko00310,ko00330,ko00360,ko00472,ko00473,ko01100,map00310,map00330,map00360,map00472,map00473,map01100	ko00000,ko00001,ko01000,ko01007	Acts on the D-isomers of alanine, leucine, aspartate, glutamate, aminobutyrate, norvaline and asparagine. The enzyme transfers an amino group from a substrate D-amino acid to the pyridoxal phosphate cofactor to form pyridoxamine and an alpha- keto acid in the first half-reaction
PHMJEDCH_00926	1.71e-105	pksA	-	-	K	-	-	-	Transcriptional regulator
PHMJEDCH_00927	1.66e-118	ymcC	-	-	S	-	-	-	Membrane
PHMJEDCH_00928	2.39e-108	-	-	-	T	-	-	-	universal stress protein
PHMJEDCH_00929	0.0	yheI	-	-	V	ko:K18216,ko:K18889	ko02010,map02010	ko00000,ko00001,ko00002,ko01504,ko02000	COG1132 ABC-type multidrug transport system, ATPase and permease components
PHMJEDCH_00930	0.0	yheH	-	-	V	ko:K18217,ko:K18890	ko02010,map02010	ko00000,ko00001,ko00002,ko01504,ko02000	COG1132 ABC-type multidrug transport system, ATPase and permease components
PHMJEDCH_00931	4.78e-127	yheG	-	-	GM	-	-	-	NAD(P)H-binding
PHMJEDCH_00933	1.91e-38	sspB	-	-	S	ko:K06418,ko:K06419	-	ko00000	spore protein
PHMJEDCH_00934	2.12e-49	yheE	-	-	S	-	-	-	Family of unknown function (DUF5342)
PHMJEDCH_00935	5.52e-316	yheD	-	-	HJ	-	-	-	YheC/D like ATP-grasp
PHMJEDCH_00936	2.7e-257	yheC	-	-	HJ	-	-	-	YheC/D like ATP-grasp
PHMJEDCH_00937	3.13e-254	yheB	-	-	S	-	-	-	Belongs to the UPF0754 family
PHMJEDCH_00938	2.72e-69	yheA	-	-	S	-	-	-	Belongs to the UPF0342 family
PHMJEDCH_00939	2.49e-197	yhaX	-	-	S	-	-	-	haloacid dehalogenase-like hydrolase
PHMJEDCH_00940	0.0	hemZ	-	-	H	-	-	-	coproporphyrinogen III oxidase
PHMJEDCH_00941	1.48e-311	-	1.14.13.59	-	Q	ko:K03897	ko00310,ko01120,map00310,map01120	ko00000,ko00001,ko01000	L-lysine 6-monooxygenase (NADPH-requiring)
PHMJEDCH_00942	7.44e-262	yhaU	-	-	P	ko:K03455	-	ko00000	COG0475 Kef-type K transport systems, membrane components
PHMJEDCH_00943	1.53e-112	-	-	-	P	ko:K07228	-	ko00000	regulatory, ligand-binding protein related to C-terminal domains of K channels
PHMJEDCH_00945	1.87e-171	yhaR	-	-	I	-	-	-	enoyl-CoA hydratase
PHMJEDCH_00946	1.21e-20	-	-	-	S	-	-	-	YhzD-like protein
PHMJEDCH_00947	3.45e-209	yhaQ	-	-	S	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PHMJEDCH_00948	2.67e-274	yhaP	-	-	CP	ko:K01992	-	ko00000,ko00002,ko02000	COG1668 ABC-type Na efflux pump, permease component
PHMJEDCH_00949	3.8e-293	yhaO	-	-	L	ko:K03547	-	ko00000,ko03400	DNA repair exonuclease
PHMJEDCH_00950	0.0	yhaN	-	-	L	-	-	-	AAA domain
PHMJEDCH_00951	5.61e-223	yhaM	-	-	L	ko:K03698	-	ko00000,ko01000,ko03019	Shows a 3'-5' exoribonuclease activity
PHMJEDCH_00952	8.23e-43	yhaL	-	-	S	-	-	-	Sporulation protein YhaL
PHMJEDCH_00953	7.87e-183	prsA	5.2.1.8	-	M	ko:K01802,ko:K07533	-	ko00000,ko01000,ko03110	plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
PHMJEDCH_00954	4.32e-122	yhaK	-	-	S	-	-	-	Putative zincin peptidase
PHMJEDCH_00955	1.2e-72	yhaI	-	-	S	-	-	-	Protein of unknown function (DUF1878)
PHMJEDCH_00956	4.54e-144	hpr	-	-	K	ko:K09682	-	ko00000,ko03000	Negative regulator of protease production and sporulation
PHMJEDCH_00957	1.58e-53	yhaH	-	-	S	-	-	-	YtxH-like protein
PHMJEDCH_00958	2.55e-24	-	-	-	-	-	-	-	-
PHMJEDCH_00959	1.12e-97	trpP	-	-	S	-	-	-	Tryptophan transporter TrpP
PHMJEDCH_00960	1.49e-252	serC	2.6.1.52	-	E	ko:K00831	ko00260,ko00680,ko00750,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map00750,map01100,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
PHMJEDCH_00961	5.82e-105	hit	-	-	FG	ko:K02503	-	ko00000,ko04147	COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
PHMJEDCH_00962	2.13e-173	ecsA	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	transporter (ATP-binding protein)
PHMJEDCH_00963	3.4e-276	ecsB	-	-	U	ko:K01992	-	ko00000,ko00002,ko02000	ABC transporter
PHMJEDCH_00964	9.96e-152	ecsC	-	-	S	-	-	-	EcsC protein family
PHMJEDCH_00965	1.68e-274	yhaA	-	-	E	ko:K01436	-	ko00000,ko01000,ko01002	COG1473 Metal-dependent amidase aminoacylase carboxypeptidase
PHMJEDCH_00966	1.65e-303	yhfA	-	-	C	-	-	-	membrane
PHMJEDCH_00967	2.98e-115	traP	1.14.99.57	-	S	ko:K21481	-	ko00000,ko01000	enzyme involved in biosynthesis of extracellular polysaccharides
PHMJEDCH_00968	0.0	pbpF	2.4.1.129, 3.4.16.4	GT51	M	ko:K12555	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01003,ko01011	penicillin-binding protein
PHMJEDCH_00969	9.19e-253	hemE	4.1.1.37	-	H	ko:K01599	ko00860,ko01100,ko01110,map00860,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
PHMJEDCH_00970	3.4e-227	hemH	4.99.1.1, 4.99.1.9	-	H	ko:K01772	ko00860,ko01100,ko01110,map00860,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the ferrous insertion into protoporphyrin IX
PHMJEDCH_00971	0.0	hemY	1.3.3.15, 1.3.3.4	-	H	ko:K00231	ko00860,ko01100,ko01110,map00860,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
PHMJEDCH_00972	5.15e-130	yhgD	-	-	K	ko:K09017	-	ko00000,ko03000	Transcriptional regulator
PHMJEDCH_00973	0.0	yhgE	-	-	S	ko:K01421	-	ko00000	YhgE Pip N-terminal domain protein
PHMJEDCH_00974	2.04e-226	fabHB	2.3.1.180	-	I	ko:K00648	ko00061,ko01100,ko01212,map00061,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
PHMJEDCH_00976	1.66e-247	yhfE	-	-	G	-	-	-	peptidase M42
PHMJEDCH_00977	3.75e-286	gltT	-	-	C	ko:K03309,ko:K11102,ko:K11103	ko02020,map02020	ko00000,ko00001,ko02000	Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
PHMJEDCH_00978	2.4e-173	yhfI	-	-	S	-	-	-	COG1234 Metal-dependent hydrolases of the beta-lactamase superfamily III
PHMJEDCH_00979	1.07e-240	lplJ	6.3.1.20	-	H	ko:K03800	ko00785,ko01100,map00785,map01100	ko00000,ko00001,ko01000	Lipoate-protein ligase
PHMJEDCH_00980	3.92e-137	yhfK	-	-	GM	-	-	-	NmrA-like family
PHMJEDCH_00981	0.0	yhfL	6.2.1.3	-	IQ	ko:K00666,ko:K01897	ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920	ko00000,ko00001,ko00002,ko01000,ko01004,ko04147	AMP-binding enzyme C-terminal domain
PHMJEDCH_00982	9.31e-84	yhfM	-	-	-	-	-	-	-
PHMJEDCH_00983	1.33e-293	yhfN	-	-	O	-	-	-	Peptidase M48
PHMJEDCH_00984	1.24e-258	aprE	3.4.21.62	-	O	ko:K01342,ko:K13277	ko02024,map02024	ko00000,ko00001,ko01000,ko01002,ko03110	Belongs to the peptidase S8 family
PHMJEDCH_00985	1.78e-163	-	-	-	P	ko:K02016	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG4594 ABC-type Fe3 -citrate transport system, periplasmic component
PHMJEDCH_00986	1.59e-129	yhfR	5.4.2.12	-	G	ko:K15634,ko:K15640	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the phosphoglycerate mutase family
PHMJEDCH_00987	8.49e-245	yhfS	2.3.1.9	-	I	ko:K00626	ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the thiolase family
PHMJEDCH_00988	0.0	vraA	6.2.1.3	-	IQ	ko:K01897	ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920	ko00000,ko00001,ko00002,ko01000,ko01004,ko04147	AMP-binding enzyme C-terminal domain
PHMJEDCH_00989	2.32e-110	bioY	-	-	S	ko:K03523	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	BioY family
PHMJEDCH_00990	1.71e-271	hemAT	-	-	NT	ko:K06595	-	ko00000,ko02035	chemotaxis protein
PHMJEDCH_00991	0.0	yhfW	-	-	CE	-	-	-	COG0665 Glycine D-amino acid oxidases (deaminating)
PHMJEDCH_00992	2.73e-204	yhxC	-	-	IQ	-	-	-	COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PHMJEDCH_00993	5.49e-42	yhzC	-	-	S	-	-	-	IDEAL
PHMJEDCH_00994	2.19e-141	comK	-	-	K	ko:K02250	ko02024,map02024	ko00000,ko00001,ko02044,ko03000	Competence transcription factor
PHMJEDCH_00995	4.21e-74	frataxin	-	-	S	ko:K05937	-	ko00000	Domain of unknown function (DU1801)
PHMJEDCH_00996	1.28e-213	-	-	-	S	-	-	-	Acetyltransferase, GNAT family
PHMJEDCH_00997	3.92e-157	yrpD	-	-	S	-	-	-	Domain of unknown function, YrpD
PHMJEDCH_00998	7.11e-57	yhjA	-	-	S	-	-	-	Excalibur calcium-binding domain
PHMJEDCH_00999	2.64e-63	-	-	-	S	-	-	-	Belongs to the UPF0145 family
PHMJEDCH_01000	0.0	yhjB	-	-	E	ko:K03307	-	ko00000	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
PHMJEDCH_01001	5.59e-37	yhjC	-	-	S	-	-	-	Protein of unknown function (DUF3311)
PHMJEDCH_01002	2.3e-76	yhjD	-	-	-	-	-	-	-
PHMJEDCH_01003	8.02e-136	yhjE	-	-	S	-	-	-	SNARE associated Golgi protein
PHMJEDCH_01004	1.3e-116	spsB	3.4.21.89	-	U	ko:K03100	ko02024,ko03060,map02024,map03060	ko00000,ko00001,ko01000,ko01002	Belongs to the peptidase S26 family
PHMJEDCH_01005	0.0	yhjG	-	-	CH	-	-	-	FAD binding domain
PHMJEDCH_01006	9.88e-120	yhjH	-	-	K	-	-	-	helix_turn_helix multiple antibiotic resistance protein
PHMJEDCH_01007	2.03e-254	yhjN	-	-	S	ko:K07120	-	ko00000	membrane
PHMJEDCH_01008	4.47e-260	blt	-	-	EGP	ko:K08153	-	ko00000,ko00002,ko02000	COG0477 Permeases of the major facilitator superfamily
PHMJEDCH_01009	1.24e-138	-	-	-	K	-	-	-	QacR-like protein, C-terminal region
PHMJEDCH_01010	3.47e-108	yhjR	-	-	S	-	-	-	Rubrerythrin
PHMJEDCH_01011	8.81e-152	ydfS	-	-	S	-	-	-	Protein of unknown function (DUF421)
PHMJEDCH_01012	0.0	rexB	3.6.4.12	-	L	ko:K16899	-	ko00000,ko01000,ko03400	ATP-dependent helicase deoxyribonuclease subunit B
PHMJEDCH_01013	0.0	addA	3.6.4.12	-	L	ko:K16898	-	ko00000,ko01000,ko03400	ATP-dependent helicase nuclease subunit A
PHMJEDCH_01014	7.47e-280	sbcD	-	-	L	ko:K03547	-	ko00000,ko03400	SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity
PHMJEDCH_01015	0.0	sbcC	-	-	L	ko:K03546	-	ko00000,ko03400	COG0419 ATPase involved in DNA repair
PHMJEDCH_01016	3.36e-66	yisB	-	-	V	-	-	-	COG1403 Restriction endonuclease
PHMJEDCH_01017	5.49e-42	gerPF	-	-	S	ko:K06299,ko:K06304	-	ko00000	Spore germination protein gerPA/gerPF
PHMJEDCH_01018	1.43e-78	gerPE	-	-	S	ko:K06303	-	ko00000	Spore germination protein GerPE
PHMJEDCH_01019	1.44e-31	gerPD	-	-	S	ko:K06302	-	ko00000	Spore germination protein
PHMJEDCH_01020	3.28e-104	gerPC	-	-	S	ko:K06301	-	ko00000	Spore germination protein
PHMJEDCH_01021	1.01e-44	gerPB	-	-	S	ko:K06300	-	ko00000	cell differentiation
PHMJEDCH_01022	1.28e-45	gerPA	-	-	S	ko:K06299	-	ko00000	Spore germination protein
PHMJEDCH_01023	2.45e-13	yisI	-	-	S	-	-	-	Spo0E like sporulation regulatory protein
PHMJEDCH_01024	2.25e-211	yisK	-	-	Q	-	-	-	COG0179 2-keto-4-pentenoate hydratase 2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)
PHMJEDCH_01025	4.48e-78	yisL	-	-	S	-	-	-	UPF0344 protein
PHMJEDCH_01026	0.0	wprA	-	-	O	ko:K13274	-	ko00000,ko01000,ko01002,ko03110	Belongs to the peptidase S8 family
PHMJEDCH_01027	5.25e-115	yisN	-	-	S	-	-	-	Protein of unknown function (DUF2777)
PHMJEDCH_01028	0.0	asnO	6.3.5.4	-	E	ko:K01953	ko00250,ko01100,ko01110,map00250,map01100,map01110	ko00000,ko00001,ko01000,ko01002	Asparagine synthase
PHMJEDCH_01029	6.09e-150	crtM	2.5.1.32, 2.5.1.99	-	I	ko:K02291	ko00906,ko01062,ko01100,ko01110,map00906,map01062,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01006	phytoene
PHMJEDCH_01030	1.69e-307	yisQ	-	-	V	-	-	-	Mate efflux family protein
PHMJEDCH_01031	1.77e-201	yisR	-	-	K	-	-	-	Transcriptional regulator
PHMJEDCH_01032	3.87e-179	rbsR	-	-	K	ko:K02529,ko:K03484	-	ko00000,ko03000	helix_turn _helix lactose operon repressor
PHMJEDCH_01033	2.32e-195	yisS	1.1.1.18, 1.1.1.369, 1.1.1.370	-	S	ko:K00010,ko:K16043	ko00521,ko00562,ko01100,ko01120,ko01130,map00521,map00562,map01100,map01120,map01130	ko00000,ko00001,ko01000	Oxidoreductase family, C-terminal alpha/beta domain
PHMJEDCH_01034	3.26e-100	yisT	-	-	S	-	-	-	DinB family
PHMJEDCH_01035	8.48e-96	argO	-	-	S	ko:K06895	-	ko00000,ko02000	Lysine exporter protein LysE YggA
PHMJEDCH_01036	1.49e-233	yisV	-	-	K	ko:K18907	-	ko00000,ko00002,ko01504,ko03000	COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
PHMJEDCH_01037	6.78e-84	yisX	-	-	S	-	-	-	Pentapeptide repeats (9 copies)
PHMJEDCH_01038	6.78e-100	-	-	-	S	-	-	-	Acetyltransferase (GNAT) domain
PHMJEDCH_01039	0.0	yitJ	1.5.1.20, 2.1.1.10	-	E	ko:K00297,ko:K00547	ko00270,ko00670,ko00720,ko01100,ko01110,ko01120,ko01200,ko01523,map00270,map00670,map00720,map01100,map01110,map01120,map01200,map01523	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of 5,10-methylenetetrahydrofolate from 5-methyltetrahydrofolate and S-adenosyl-L-homocysteine and methionine from S-adenosyl-L-methionine and L-homocysteine
PHMJEDCH_01040	7.44e-78	yitK	-	-	S	ko:K09767	-	ko00000	Belongs to the UPF0234 family
PHMJEDCH_01041	3.3e-199	yitL	-	-	S	ko:K00243	-	ko00000	protein conserved in bacteria
PHMJEDCH_01042	2.3e-186	-	-	-	S	ko:K07335	-	ko00000	ABC transporter substrate-binding protein PnrA-like
PHMJEDCH_01043	1.06e-288	yvaQ	-	-	NT	ko:K03406	ko02020,ko02030,map02020,map02030	ko00000,ko00001,ko02035	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
PHMJEDCH_01044	8.38e-297	cypC	1.11.2.4	-	Q	ko:K15629	-	ko00000,ko00199,ko01000	Cytochrome P450
PHMJEDCH_01046	1.39e-196	yitS	-	-	S	-	-	-	protein conserved in bacteria
PHMJEDCH_01047	4.62e-189	yitT	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2179)
PHMJEDCH_01048	3.05e-104	ipi	-	-	S	-	-	-	Intracellular proteinase inhibitor
PHMJEDCH_01049	4.3e-36	-	-	-	S	-	-	-	Protein of unknown function (DUF3813)
PHMJEDCH_01050	1.49e-11	-	-	-	-	-	-	-	-
PHMJEDCH_01051	3.84e-192	-	3.1.3.104	-	S	ko:K21064	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Sucrose-6F-phosphate phosphohydrolase
PHMJEDCH_01052	1.62e-181	yitV	-	-	S	ko:K06889	-	ko00000	COG1073 Hydrolases of the alpha beta superfamily
PHMJEDCH_01053	3.26e-68	yitW	-	-	S	-	-	-	metal-sulfur cluster biosynthetic enzyme
PHMJEDCH_01054	3.29e-92	fosB	-	-	H	ko:K11210,ko:K21252	-	ko00000,ko01000,ko01504	Metallothiol transferase which confers resistance to fosfomycin by catalyzing the addition of a thiol cofactor to fosfomycin. L-cysteine is probably the physiological thiol donor
PHMJEDCH_01055	1.05e-192	yitY	-	-	C	-	-	-	D-arabinono-1,4-lactone oxidase
PHMJEDCH_01056	6.53e-50	deoB	5.4.2.7	-	G	ko:K01839	ko00030,ko00230,map00030,map00230	ko00000,ko00001,ko01000	Phosphotransfer between the C1 and C5 carbon atoms of pentose
PHMJEDCH_01057	8.69e-190	punA	2.4.2.1, 2.4.2.28	-	F	ko:K00772,ko:K03783	ko00230,ko00240,ko00270,ko00760,ko01100,ko01110,map00230,map00240,map00270,map00760,map01100,map01110	ko00000,ko00001,ko00002,ko01000	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
PHMJEDCH_01058	5.58e-270	dacF	3.4.16.4	-	M	ko:K07258	ko00550,ko01100,map00550,map01100	ko00000,ko00001,ko01000,ko01002,ko01011	Belongs to the peptidase S11 family
PHMJEDCH_01059	1.98e-76	spoIIAA	-	-	T	ko:K06378	-	ko00000	Belongs to the anti-sigma-factor antagonist family
PHMJEDCH_01060	4.77e-100	spoIIAB	2.7.11.1	-	F	ko:K06379	-	ko00000,ko01000	Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti-anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition
PHMJEDCH_01061	6.81e-174	sigF	-	-	K	ko:K03091	-	ko00000,ko03021	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
PHMJEDCH_01062	9.1e-141	spoVAA	-	-	S	ko:K06403	-	ko00000	Stage V sporulation protein AA
PHMJEDCH_01063	7.71e-90	spoVAB	-	-	S	ko:K06404	-	ko00000	Stage V sporulation protein AB
PHMJEDCH_01064	2.85e-103	spoVAC	-	-	S	ko:K06405	-	ko00000	stage V sporulation protein AC
PHMJEDCH_01065	9.17e-241	spoVAD	-	-	I	ko:K06406	-	ko00000	Stage V sporulation protein AD
PHMJEDCH_01066	3.57e-74	spoVAEB	-	-	S	ko:K06407	-	ko00000	stage V sporulation protein
PHMJEDCH_01067	1.2e-138	-	-	-	S	ko:K06407	-	ko00000	stage V sporulation protein
PHMJEDCH_01068	0.0	spoVAF	-	-	EG	ko:K06408	-	ko00000	Stage V sporulation protein AF
PHMJEDCH_01069	0.0	lysA	4.1.1.20	-	E	ko:K01586	ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
PHMJEDCH_01070	1.17e-194	ypuA	-	-	S	-	-	-	Secreted protein
PHMJEDCH_01071	1.18e-103	ppiB	5.2.1.8	-	O	ko:K01802,ko:K03768	-	ko00000,ko01000,ko03110	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
PHMJEDCH_01072	6.23e-102	ccdC1	-	-	O	-	-	-	Protein of unknown function (DUF1453)
PHMJEDCH_01073	2.37e-124	lepB	3.4.21.89	-	U	ko:K03100	ko02024,ko03060,map02024,map03060	ko00000,ko00001,ko01000,ko01002	Belongs to the peptidase S26 family
PHMJEDCH_01074	7.86e-68	ypuD	-	-	-	-	-	-	-
PHMJEDCH_01075	1.24e-257	ribD	1.1.1.193, 3.5.4.26	-	H	ko:K11752	ko00740,ko01100,ko01110,ko02024,map00740,map01100,map01110,map02024	ko00000,ko00001,ko00002,ko01000	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
PHMJEDCH_01076	1.09e-141	ribE	2.5.1.9	-	H	ko:K00793	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Riboflavin synthase
PHMJEDCH_01077	8.2e-288	ribBA	3.5.4.25, 4.1.99.12	-	H	ko:K14652	ko00740,ko00790,ko01100,ko01110,map00740,map00790,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
PHMJEDCH_01078	1.4e-105	ribH	2.5.1.78	-	H	ko:K00794	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin
PHMJEDCH_01079	1.12e-83	ribT	-	-	K	ko:K02859	-	ko00000	COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PHMJEDCH_01080	2.41e-113	ypuF	-	-	S	ko:K09763	-	ko00000	Domain of unknown function (DUF309)
PHMJEDCH_01082	4.93e-165	scpA	-	-	D	ko:K05896	-	ko00000,ko03036	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
PHMJEDCH_01083	1.3e-131	scpB	-	-	D	ko:K06024	-	ko00000,ko03036	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
PHMJEDCH_01084	5.9e-107	ypuI	-	-	S	-	-	-	Protein of unknown function (DUF3907)
PHMJEDCH_01085	2.36e-268	dacB	3.4.16.4	-	M	ko:K07258	ko00550,ko01100,map00550,map01100	ko00000,ko00001,ko01000,ko01002,ko01011	Belongs to the peptidase S11 family
PHMJEDCH_01086	6.22e-134	spmA	-	-	S	ko:K06373	-	ko00000	Spore maturation protein
PHMJEDCH_01087	7.39e-115	spmB	-	-	S	ko:K06374	-	ko00000	Spore maturation protein
PHMJEDCH_01088	1.74e-166	rluB	5.4.99.22	-	J	ko:K06178	-	ko00000,ko01000,ko03009	Belongs to the pseudouridine synthase RsuA family
PHMJEDCH_01089	2.05e-126	resA	-	-	CO	-	-	-	Thiol-disulfide oxidoreductase which is required in disulfide reduction during c-type cytochrome synthesis. May accept reducing equivalents from CcdA, leading to breakage of disulfide bonds in apocytochrome c
PHMJEDCH_01090	0.0	resB	-	-	O	ko:K07399	-	ko00000	COG1333 ResB protein required for cytochrome c biosynthesis
PHMJEDCH_01091	3.09e-252	resC	-	-	O	-	-	-	'COG0755 ABC-type transport system involved in cytochrome c biogenesis, permease component'
PHMJEDCH_01092	9.77e-171	resD	-	-	T	ko:K07775	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PHMJEDCH_01093	0.0	resE	2.7.13.3	-	T	ko:K07651	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
PHMJEDCH_01094	3.09e-133	sigX	-	-	K	ko:K03088	-	ko00000,ko03021	Belongs to the sigma-70 factor family. ECF subfamily
PHMJEDCH_01095	4.67e-216	rsiX	-	-	-	-	-	-	-
PHMJEDCH_01096	0.0	serA	1.1.1.399, 1.1.1.95	-	E	ko:K00058	ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PHMJEDCH_01097	3.59e-121	ribU	-	-	U	-	-	-	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
PHMJEDCH_01098	5.88e-55	fer	-	-	C	ko:K05337	-	ko00000	Ferredoxin
PHMJEDCH_01099	2.97e-244	ypbB	5.1.3.1	-	S	ko:K01783	ko00030,ko00040,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	protein conserved in bacteria
PHMJEDCH_01100	0.0	recQ	3.6.4.12	-	L	ko:K03654	ko03018,map03018	ko00000,ko00001,ko01000,ko03400	DNA helicase
PHMJEDCH_01101	2.24e-124	ypbD	-	-	S	ko:K07052	-	ko00000	metal-dependent membrane protease
PHMJEDCH_01102	1.07e-16	ypbE	-	-	M	-	-	-	Lysin motif
PHMJEDCH_01103	1.9e-83	ypbE	-	-	M	-	-	-	Lysin motif
PHMJEDCH_01104	3.73e-109	ypbF	-	-	S	-	-	-	Protein of unknown function (DUF2663)
PHMJEDCH_01105	5.62e-181	ypbG	-	-	S	ko:K07098	-	ko00000	Calcineurin-like phosphoesterase superfamily domain
PHMJEDCH_01106	1.59e-135	mecB	-	-	NOT	ko:K16511	-	ko00000	Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis. Acts negatively in the development of competence by binding ComK and recruiting it to the ClpCP protease. When overexpressed, inhibits sporulation. Also involved in Spx degradation by ClpC
PHMJEDCH_01107	8.6e-310	gudB	1.4.1.2	-	E	ko:K00260	ko00220,ko00250,ko00430,ko00910,ko01100,map00220,map00250,map00430,map00910,map01100	ko00000,ko00001,ko01000	Belongs to the Glu Leu Phe Val dehydrogenases family
PHMJEDCH_01108	5.93e-236	ypdA	1.8.1.9	-	O	ko:K00384	ko00450,map00450	ko00000,ko00001,ko01000	COG0492 Thioredoxin reductase
PHMJEDCH_01109	2.61e-155	prsW	-	-	S	-	-	-	Involved in the degradation of specific anti-sigma factors
PHMJEDCH_01110	2.15e-203	sleB	3.5.1.28	-	M	ko:K01449	-	ko00000,ko01000	Spore cortex-lytic enzyme
PHMJEDCH_01111	1.1e-311	ypeB	-	-	H	ko:K06313	-	ko00000	sporulation protein
PHMJEDCH_01112	6.58e-72	ypfA	-	-	M	-	-	-	Flagellar protein YcgR
PHMJEDCH_01113	1.12e-17	-	-	-	S	-	-	-	Family of unknown function (DUF5359)
PHMJEDCH_01114	3.75e-142	cmk	2.7.4.25	-	F	ko:K00945	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the cytidylate kinase family. Type 1 subfamily
PHMJEDCH_01115	3.52e-257	rpsA	-	-	J	ko:K02945	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein S1
PHMJEDCH_01116	4.76e-228	fni	5.3.3.2	-	C	ko:K01823	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
PHMJEDCH_01117	1.32e-12	-	-	-	S	-	-	-	YpzI-like protein
PHMJEDCH_01118	6.38e-129	yphA	-	-	-	-	-	-	-
PHMJEDCH_01119	2.86e-316	der	-	-	S	ko:K03977	-	ko00000,ko03009	GTPase that plays an essential role in the late steps of ribosome biogenesis
PHMJEDCH_01120	9.14e-240	gpsA	1.1.1.94	-	I	ko:K00057	ko00564,ko01110,map00564,map01110	ko00000,ko00001,ko01000	Glycerol-3-phosphate dehydrogenase
PHMJEDCH_01121	1.13e-23	yphE	-	-	S	-	-	-	Protein of unknown function (DUF2768)
PHMJEDCH_01122	2.47e-166	yphF	-	-	-	-	-	-	-
PHMJEDCH_01124	0.0	spoIVA	-	-	S	ko:K06398	-	ko00000	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
PHMJEDCH_01125	1.07e-57	hbs	-	-	L	ko:K03530	-	ko00000,ko03032,ko03036,ko03400	Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
PHMJEDCH_01126	6.27e-131	folE	3.5.4.16	-	H	ko:K01495	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	GTP cyclohydrolase
PHMJEDCH_01127	6.23e-47	mtrB	-	-	K	ko:K06285	-	ko00000,ko03000	Required for transcription attenuation control in the Trp operon. This trans-acting factor seems to recognize a 10 bases nucleotide sequence in the Trp leader transcript causing transcription termination. Binds the leader RNA only in presence of L-tryptophan
PHMJEDCH_01128	2.68e-175	hepS	2.5.1.30	-	H	ko:K00805	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1
PHMJEDCH_01129	3.03e-166	menG	2.1.1.163, 2.1.1.201	-	H	ko:K03183	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
PHMJEDCH_01130	2.19e-249	hepT	2.5.1.30, 2.5.1.83	-	H	ko:K00805,ko:K21275	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	Belongs to the FPP GGPP synthase family
PHMJEDCH_01131	2.01e-102	ndk	2.7.4.6	-	F	ko:K00940	ko00230,ko00240,ko00983,ko01100,ko01110,ko01130,ko04016,map00230,map00240,map00983,map01100,map01110,map01130,map04016	ko00000,ko00001,ko00002,ko01000,ko04131	Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate
PHMJEDCH_01132	8e-178	cheR	2.1.1.80	-	NT	ko:K00575	ko02020,ko02030,map02020,map02030	ko00000,ko00001,ko01000,ko02035	COG1352 Methylase of chemotaxis methyl-accepting proteins
PHMJEDCH_01133	3.26e-274	aroC	4.2.3.5	-	E	ko:K01736	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
PHMJEDCH_01134	1.14e-253	aroB	4.2.3.4	-	E	ko:K01735	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
PHMJEDCH_01135	8.09e-77	aroH	5.4.99.5	-	E	ko:K06208	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the Claisen rearrangement of chorismate to prephenate. Probably involved in the aromatic amino acid biosynthesis
PHMJEDCH_01136	0.0	trpE	4.1.3.27	-	EH	ko:K01657	ko00400,ko00405,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00400,map00405,map01100,map01110,map01130,map01230,map02024,map02025	ko00000,ko00001,ko00002,ko01000	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
PHMJEDCH_01137	3.8e-201	trpD	2.4.2.18, 4.1.3.27	-	E	ko:K00766,ko:K13497	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
PHMJEDCH_01138	5.7e-159	trpC	4.1.1.48, 5.3.1.24	-	E	ko:K01609,ko:K13498	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the TrpC family
PHMJEDCH_01139	2.57e-141	trpF	5.3.1.24	-	E	ko:K01817	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the TrpF family
PHMJEDCH_01140	9.2e-286	trpB	4.2.1.20	-	E	ko:K01696	ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
PHMJEDCH_01141	1.08e-175	trpA	4.2.1.20	-	E	ko:K01695	ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
PHMJEDCH_01142	2.67e-251	hisC	2.6.1.9	-	E	ko:K00817	ko00340,ko00350,ko00360,ko00400,ko00401,ko00960,ko01100,ko01110,ko01130,ko01230,map00340,map00350,map00360,map00400,map00401,map00960,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
PHMJEDCH_01143	9.38e-256	tyrA	1.3.1.12	-	E	ko:K04517	ko00400,ko00401,ko01100,ko01110,ko01130,ko01230,map00400,map00401,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	prephenate dehydrogenase
PHMJEDCH_01144	3.79e-290	aroA	2.5.1.19	-	E	ko:K00800	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
PHMJEDCH_01145	7.68e-292	ypiA	-	-	S	-	-	-	COG0457 FOG TPR repeat
PHMJEDCH_01146	2.14e-128	ypiB	-	-	S	-	-	-	Belongs to the UPF0302 family
PHMJEDCH_01147	1.21e-94	ypiF	-	-	S	-	-	-	Protein of unknown function (DUF2487)
PHMJEDCH_01148	2.27e-124	qcrA	-	-	C	ko:K03886	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	Menaquinol-cytochrome c reductase
PHMJEDCH_01149	8.76e-166	qcrB	-	-	C	ko:K03887	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002	COG1290 Cytochrome b subunit of the bc complex
PHMJEDCH_01150	9.48e-190	qcrC	-	-	C	ko:K03888	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002	Menaquinol-cytochrome c reductase cytochrome b c subunit
PHMJEDCH_01151	6.12e-126	ypjA	-	-	S	-	-	-	membrane
PHMJEDCH_01152	1.09e-177	ypjB	-	-	S	-	-	-	sporulation protein
PHMJEDCH_01153	5.93e-282	-	4.1.1.2	-	G	ko:K01569	ko00630,ko01100,map00630,map01100	ko00000,ko00001,ko01000	Oxalate decarboxylase
PHMJEDCH_01154	2.49e-198	ypjC	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2179)
PHMJEDCH_01155	2.47e-74	ypjD	-	-	S	-	-	-	Nucleotide pyrophosphohydrolase
PHMJEDCH_01156	9.38e-187	dapB	1.17.1.8	-	E	ko:K00215	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
PHMJEDCH_01157	3.58e-93	mgsA	4.2.3.3	-	G	ko:K01734	ko00640,ko01120,map00640,map01120	ko00000,ko00001,ko01000	methylglyoxal synthase
PHMJEDCH_01158	3.8e-162	bshB1	-	-	S	ko:K01463	-	ko00000,ko01000	proteins, LmbE homologs
PHMJEDCH_01159	2.45e-267	bshA	-	GT4	M	ko:K00754	-	ko00000,ko01000	N-acetyl-alpha-D-glucosaminyl L-malate synthase
PHMJEDCH_01160	1.53e-266	cca	2.7.7.72	-	J	ko:K00974	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
PHMJEDCH_01161	2.04e-226	birA	6.3.4.15	-	K	ko:K03524	ko00780,ko01100,map00780,map01100	ko00000,ko00001,ko01000,ko03000	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
PHMJEDCH_01162	1.89e-191	panB	2.1.2.11	-	H	ko:K00606	ko00770,ko01100,ko01110,map00770,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate
PHMJEDCH_01163	4.82e-194	panC	6.3.2.1	-	H	ko:K01918	ko00410,ko00770,ko01100,ko01110,map00410,map00770,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
PHMJEDCH_01164	1.98e-83	panD	4.1.1.11	-	H	ko:K01579	ko00410,ko00770,ko01100,ko01110,map00410,map00770,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
PHMJEDCH_01165	0.0	dinG	3.6.4.12	-	L	ko:K03722	-	ko00000,ko01000,ko03400	helicase involved in DNA repair and perhaps also replication
PHMJEDCH_01166	1.52e-32	ypmA	-	-	S	-	-	-	Protein of unknown function (DUF4264)
PHMJEDCH_01167	2.74e-95	ypmB	-	-	S	-	-	-	protein conserved in bacteria
PHMJEDCH_01168	1.1e-278	aspB	2.6.1.1, 2.6.1.14	-	E	ko:K00812,ko:K22457	ko00220,ko00250,ko00270,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko01000,ko01007	Aminotransferase
PHMJEDCH_01169	0.0	asnS	6.1.1.22	-	J	ko:K01893	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	asparaginyl-tRNA
PHMJEDCH_01170	8.05e-166	dnaD	-	-	L	ko:K02086	-	ko00000	DNA replication protein DnaD
PHMJEDCH_01171	1.63e-154	nth	4.2.99.18	-	L	ko:K10773	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
PHMJEDCH_01172	4.6e-113	ypoC	-	-	-	-	-	-	-
PHMJEDCH_01173	0.0	ponA	2.4.1.129, 3.4.16.4	GT51	M	ko:K05366	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01003,ko01011	penicillin-binding protein
PHMJEDCH_01174	8.49e-144	recU	-	-	L	ko:K03700	-	ko00000,ko03400	Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
PHMJEDCH_01175	1.05e-225	yppC	-	-	S	-	-	-	Protein of unknown function (DUF2515)
PHMJEDCH_01180	2.64e-59	yppG	-	-	S	-	-	-	YppG-like protein
PHMJEDCH_01181	6.64e-80	hspX	-	-	O	ko:K06335,ko:K13993	ko04141,map04141	ko00000,ko00001,ko03110	Belongs to the small heat shock protein (HSP20) family
PHMJEDCH_01182	6.99e-115	ypqE	-	-	G	ko:K02777	ko00010,ko00500,ko00520,ko02026,ko02060,ko05111,map00010,map00500,map00520,map02026,map02060,map05111	ko00000,ko00001,ko00002,ko01000,ko02000	COG2190 Phosphotransferase system IIA components
PHMJEDCH_01183	0.0	yprA	-	-	L	ko:K06877	-	ko00000	COG1205 Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster
PHMJEDCH_01184	3.33e-285	yprB	-	-	L	ko:K07502	-	ko00000	RNase_H superfamily
PHMJEDCH_01186	8.12e-36	cotD	-	-	S	ko:K06327	-	ko00000	Inner spore coat protein D
PHMJEDCH_01187	3.67e-126	ypsA	-	-	S	-	-	-	Belongs to the UPF0398 family
PHMJEDCH_01188	5.52e-61	gpsB	-	-	D	-	-	-	Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
PHMJEDCH_01189	3.07e-276	ypsC	-	-	L	ko:K07444	-	ko00000,ko01000	Belongs to the methyltransferase superfamily
PHMJEDCH_01190	2.19e-96	yqgA	-	-	-	-	-	-	-
PHMJEDCH_01191	6.91e-31	-	-	-	S	-	-	-	YpzG-like protein
PHMJEDCH_01193	0.0	ypvA	3.6.4.12	-	KL	ko:K03722	-	ko00000,ko01000,ko03400	COG1199 Rad3-related DNA helicases
PHMJEDCH_01194	0.0	ypwA	3.4.17.19	-	E	ko:K01299	-	ko00000,ko01000,ko01002	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
PHMJEDCH_01195	8.76e-124	xpt	2.4.2.22	-	F	ko:K03816	ko00230,ko01100,ko01110,map00230,map01100,map01110	ko00000,ko00001,ko01000	Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
PHMJEDCH_01196	2.07e-76	pbuX	-	-	F	ko:K03458,ko:K16169	-	ko00000,ko02000	xanthine
PHMJEDCH_01197	3.63e-47	-	-	-	L	-	-	-	Recombinase
PHMJEDCH_01198	5.36e-110	yokF	3.1.31.1	-	L	ko:K01174	-	ko00000,ko01000	RNA catabolic process
PHMJEDCH_01199	7.74e-121	-	-	-	G	-	-	-	SMI1-KNR4 cell-wall
PHMJEDCH_01200	6.07e-172	-	-	-	V	-	-	-	HNH endonuclease
PHMJEDCH_01201	4.74e-227	-	-	-	S	-	-	-	Bacterial EndoU nuclease
PHMJEDCH_01202	3.72e-100	-	-	-	S	-	-	-	SMI1-KNR4 cell-wall
PHMJEDCH_01204	5.79e-117	yunB	-	-	S	-	-	-	Sporulation protein YunB (Spo_YunB)
PHMJEDCH_01205	1.97e-26	yunB	-	-	S	-	-	-	Sporulation protein YunB (Spo_YunB)
PHMJEDCH_01206	2.56e-53	-	-	-	S	-	-	-	YolD-like protein
PHMJEDCH_01207	6.19e-283	dinB2	2.7.7.7	-	L	ko:K02346,ko:K03502	-	ko00000,ko01000,ko03400	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
PHMJEDCH_01209	2.31e-23	-	-	-	S	ko:K06359,ko:K06360,ko:K06367	ko02024,map02024	ko00000,ko00001,ko01000	Response regulator aspartate phosphatase
PHMJEDCH_01210	3.53e-85	-	-	-	S	ko:K06359,ko:K06360,ko:K06367	ko02024,map02024	ko00000,ko00001,ko01000	Response regulator aspartate phosphatase
PHMJEDCH_01211	1.05e-06	-	-	-	-	-	-	-	-
PHMJEDCH_01213	2.14e-44	-	-	-	S	-	-	-	Bacteriophage holin
PHMJEDCH_01215	3.33e-97	xlyB	3.5.1.28	-	M	ko:K01447	-	ko00000,ko01000	N-acetylmuramoyl-L-alanine amidase
PHMJEDCH_01216	0.0	-	-	-	M	-	-	-	Pectate lyase superfamily protein
PHMJEDCH_01217	2e-136	-	-	-	-	-	-	-	-
PHMJEDCH_01219	0.0	-	-	-	S	-	-	-	Pfam Transposase IS66
PHMJEDCH_01220	8.77e-109	-	-	-	S	-	-	-	Phage tail protein
PHMJEDCH_01221	0.0	-	-	-	S	-	-	-	peptidoglycan catabolic process
PHMJEDCH_01222	3.43e-276	-	-	-	S	-	-	-	peptidoglycan catabolic process
PHMJEDCH_01223	1.93e-74	-	-	-	-	-	-	-	-
PHMJEDCH_01226	1.13e-102	-	-	-	KLT	-	-	-	Protein tyrosine kinase
PHMJEDCH_01227	3.21e-22	-	-	-	-	-	-	-	-
PHMJEDCH_01229	2.1e-223	-	-	-	A	-	-	-	Belongs to the 'phage' integrase family
PHMJEDCH_01230	3.68e-64	-	-	-	-	-	-	-	-
PHMJEDCH_01231	1.26e-76	-	-	-	-	-	-	-	-
PHMJEDCH_01232	2.02e-106	-	3.1.4.46, 5.4.2.11	-	C	ko:K01126,ko:K01834	ko00010,ko00260,ko00564,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00564,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	glycerophosphoryl diester phosphodiesterase
PHMJEDCH_01234	2.74e-44	-	-	-	-	-	-	-	-
PHMJEDCH_01235	3.53e-64	-	-	-	-	-	-	-	-
PHMJEDCH_01237	8.02e-71	-	-	-	-	-	-	-	-
PHMJEDCH_01238	2.21e-147	-	-	-	-	-	-	-	-
PHMJEDCH_01239	1.42e-109	-	-	-	-	-	-	-	-
PHMJEDCH_01240	8.93e-72	-	-	-	-	-	-	-	-
PHMJEDCH_01243	4.83e-84	-	-	-	-	-	-	-	-
PHMJEDCH_01247	3.95e-107	-	-	-	-	-	-	-	-
PHMJEDCH_01252	8.2e-287	-	-	-	-	-	-	-	-
PHMJEDCH_01255	4.77e-47	-	-	-	L	ko:K03530	-	ko00000,ko03032,ko03036,ko03400	Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
PHMJEDCH_01256	0.0	-	-	-	-	-	-	-	-
PHMJEDCH_01260	1.54e-72	-	-	-	D	-	-	-	Tubulin/FtsZ family, GTPase domain
PHMJEDCH_01262	4.26e-260	-	-	-	-	-	-	-	-
PHMJEDCH_01263	4.06e-185	-	-	-	S	-	-	-	DNA binding
PHMJEDCH_01264	2.49e-176	-	-	-	S	-	-	-	N-methyltransferase activity
PHMJEDCH_01266	0.0	-	-	-	S	-	-	-	ATP-dependent DNA helicase activity
PHMJEDCH_01267	5.83e-65	-	-	-	S	ko:K07741	-	ko00000	Phage regulatory protein Rha (Phage_pRha)
PHMJEDCH_01268	3.25e-68	-	-	-	-	-	-	-	-
PHMJEDCH_01270	1.93e-112	-	-	-	-	-	-	-	-
PHMJEDCH_01271	5.9e-11	ywlA	-	-	S	-	-	-	Uncharacterised protein family (UPF0715)
PHMJEDCH_01272	1.15e-12	-	-	-	I	-	-	-	Acyltransferase family
PHMJEDCH_01273	6.01e-89	yoaW	-	-	-	-	-	-	-
PHMJEDCH_01274	4.89e-33	-	-	-	K	ko:K07727	-	ko00000,ko03000	Cro/C1-type HTH DNA-binding domain
PHMJEDCH_01288	6.34e-98	-	-	-	-	-	-	-	-
PHMJEDCH_01292	2.07e-182	-	-	-	-	-	-	-	-
PHMJEDCH_01297	5.81e-188	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
PHMJEDCH_01298	2.71e-287	-	-	-	S	-	-	-	DNA-sulfur modification-associated
PHMJEDCH_01299	4.49e-198	-	-	-	-	-	-	-	-
PHMJEDCH_01300	1.45e-30	-	-	-	K	ko:K07727	-	ko00000,ko03000	Transcriptional regulator
PHMJEDCH_01303	5.29e-54	-	-	-	-	-	-	-	-
PHMJEDCH_01307	8.45e-82	-	-	-	N	-	-	-	bacterial-type flagellum assembly
PHMJEDCH_01311	5.48e-32	-	-	-	-	-	-	-	-
PHMJEDCH_01312	1.93e-87	-	2.1.1.113	-	L	ko:K00590	-	ko00000,ko01000,ko02048	Belongs to the N(4) N(6)-methyltransferase family
PHMJEDCH_01316	2.26e-22	-	-	-	-	-	-	-	-
PHMJEDCH_01322	1.42e-178	ligB	6.5.1.1, 6.5.1.6, 6.5.1.7	-	L	ko:K01971,ko:K10747	ko03030,ko03410,ko03420,ko03430,ko03450,map03030,map03410,map03420,map03430,map03450	ko00000,ko00001,ko01000,ko03032,ko03400	ATP-dependent DNA ligase
PHMJEDCH_01323	4e-162	yoqW	-	-	S	-	-	-	Belongs to the SOS response-associated peptidase family
PHMJEDCH_01326	2.54e-10	-	-	-	S	-	-	-	YopX protein
PHMJEDCH_01327	3.57e-205	-	-	-	-	-	-	-	-
PHMJEDCH_01330	1.27e-106	-	-	-	S	-	-	-	Pfam:DUF867
PHMJEDCH_01331	9.82e-276	-	-	-	M	-	-	-	Parallel beta-helix repeats
PHMJEDCH_01332	1.71e-69	pphA	3.1.3.16	-	T	ko:K07313	-	ko00000,ko01000	Calcineurin-like phosphoesterase
PHMJEDCH_01338	1.94e-179	-	-	-	L	-	-	-	Participates in initiation and elongation during chromosome replication
PHMJEDCH_01339	3.09e-64	-	-	-	S	-	-	-	DNA primase activity
PHMJEDCH_01340	3.93e-144	-	-	-	L	ko:K07462	ko03410,ko03430,ko03440,map03410,map03430,map03440	ko00000,ko00001,ko01000,ko03400	Single-stranded-DNA-specific exonuclease RecJ
PHMJEDCH_01342	4.35e-65	-	-	-	S	-	-	-	protein conserved in bacteria
PHMJEDCH_01346	2.04e-92	tmk	2.1.1.45, 2.7.4.9	-	F	ko:K00560,ko:K00943	ko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523	ko00000,ko00001,ko00002,ko01000	dTDP biosynthetic process
PHMJEDCH_01347	1.29e-112	yorS	-	-	S	-	-	-	5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C)
PHMJEDCH_01348	6.57e-202	ddeI	2.1.1.37	-	L	ko:K00558	ko00270,ko01100,ko05206,map00270,map01100,map05206	ko00000,ko00001,ko00002,ko01000,ko02048,ko03032,ko03036	DNA (cytosine-5-)-methyltransferase activity
PHMJEDCH_01366	1.54e-82	-	-	-	S	-	-	-	NrdI Flavodoxin like
PHMJEDCH_01367	7.02e-156	nrdE	1.17.4.1	-	F	ko:K00525	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PHMJEDCH_01368	8.27e-48	nrdE	1.17.4.1	-	F	ko:K00525	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PHMJEDCH_01369	3.71e-207	nrdE	1.17.4.1	-	F	ko:K00525	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PHMJEDCH_01371	2.37e-134	nrdF	1.17.4.1	-	F	ko:K00526	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PHMJEDCH_01372	2.83e-121	-	-	-	L	-	-	-	HNH endonuclease
PHMJEDCH_01373	3.47e-55	nrdF	1.17.4.1	-	F	ko:K00526	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PHMJEDCH_01375	6.38e-16	-	-	-	O	-	-	-	Glutaredoxin
PHMJEDCH_01376	2.59e-68	-	-	-	S	-	-	-	Peptidyl-tRNA hydrolase PTH2
PHMJEDCH_01377	3.14e-94	yncF	3.6.1.23	-	F	ko:K01520	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Deoxyuridine 5'-triphosphate
PHMJEDCH_01381	1.33e-192	thyA	2.1.1.45	-	F	ko:K00560	ko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523	ko00000,ko00001,ko00002,ko01000	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
PHMJEDCH_01382	2.2e-33	folA	1.5.1.3	-	H	ko:K00287	ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523	ko00000,ko00001,ko00002,ko01000	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
PHMJEDCH_01388	1.53e-117	-	-	-	L	-	-	-	Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
PHMJEDCH_01390	4.84e-200	pbuX	-	-	F	ko:K03458,ko:K16169	-	ko00000,ko02000	xanthine
PHMJEDCH_01391	2.2e-09	-	-	-	S	-	-	-	Bacillus cereus group antimicrobial protein
PHMJEDCH_01392	8.02e-60	MGMT	-	-	L	ko:K07443	-	ko00000	6-O-methylguanine DNA methyltransferase, DNA binding domain
PHMJEDCH_01393	2.22e-130	-	-	-	J	-	-	-	Acetyltransferase (GNAT) domain
PHMJEDCH_01394	3.81e-254	bcsA	-	-	Q	ko:K16167	-	ko00000,ko01008	Naringenin-chalcone synthase
PHMJEDCH_01395	2.25e-111	ypbQ	-	-	S	ko:K16168	-	ko00000,ko01008	protein conserved in bacteria
PHMJEDCH_01396	0.0	ypbR	-	-	S	-	-	-	Dynamin family
PHMJEDCH_01397	3e-45	ypbS	-	-	S	-	-	-	Protein of unknown function (DUF2533)
PHMJEDCH_01398	5.97e-11	-	-	-	-	-	-	-	-
PHMJEDCH_01399	8.42e-204	ypcP	-	-	L	-	-	-	5'3' exonuclease
PHMJEDCH_01401	3.51e-88	rnhA	3.1.26.4	-	L	ko:K03469	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Ribonuclease
PHMJEDCH_01402	3.96e-154	ypdP	-	-	S	ko:K09125	-	ko00000	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
PHMJEDCH_01403	4.29e-152	ypeP	3.1.26.4	-	L	ko:K03469	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	COG0328 Ribonuclease HI
PHMJEDCH_01404	6.37e-38	ypeQ	-	-	S	-	-	-	Zinc-finger
PHMJEDCH_01405	5.37e-48	-	-	-	S	-	-	-	Protein of unknown function (DUF2564)
PHMJEDCH_01406	4.27e-16	degR	-	-	-	-	-	-	-
PHMJEDCH_01407	5.12e-42	cspD	-	-	K	ko:K03704	-	ko00000,ko03000	Cold-shock protein
PHMJEDCH_01408	1.01e-272	ugtP	2.4.1.315	GT28	M	ko:K03429	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000,ko01003	Processive glucosyltransferase involved in the biosynthesis of both the bilayer- and non-bilayer-forming membrane glucolipids. Is able to successively transfer up to three glucosyl residues to diacylglycerol (DAG), thereby catalyzing the formation of beta-monoglucosyl-DAG (3-O-(beta-D-glucopyranosyl)-1,2-diacyl- sn-glycerol), beta-diglucosyl-DAG (3-O-(beta-D-glucopyranosyl- beta-(1- 6)-D-glucopyranosyl)-1,2-diacyl-sn-glycerol) and beta- triglucosyl-DAG (3-O-(beta-D-glucopyranosyl-beta-(1- 6)-D- glucopyranosyl-beta-(1- 6)-D-glucopyranosyl)-1,2-diacyl-sn- glycerol). Beta-diglucosyl-DAG is the predominant glycolipid found in Bacillales and is also used as a membrane anchor for lipoteichoic acid (LTA)
PHMJEDCH_01409	1.56e-225	metAA	2.3.1.46	-	E	ko:K00651	ko00270,ko00920,ko01100,ko01110,ko01230,map00270,map00920,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
PHMJEDCH_01411	4.95e-107	bsaA	1.11.1.9	-	O	ko:K00432	ko00480,ko00590,ko04918,map00480,map00590,map04918	ko00000,ko00001,ko01000	Belongs to the glutathione peroxidase family
PHMJEDCH_01412	1.69e-116	yagB	-	-	S	ko:K06950	-	ko00000	phosphohydrolase
PHMJEDCH_01413	8.12e-197	ypgR	-	-	C	-	-	-	COG0694 Thioredoxin-like proteins and domains
PHMJEDCH_01414	0.0	ilvD	4.2.1.9	-	E	ko:K01687,ko:K16786	ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,ko02010,map00290,map00770,map01100,map01110,map01130,map01210,map01230,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Belongs to the IlvD Edd family
PHMJEDCH_01415	1.38e-98	yphP	-	-	S	-	-	-	Belongs to the UPF0403 family
PHMJEDCH_01416	2.63e-167	ypiP	-	-	AJ	-	-	-	Putative SAM-dependent methyltransferase
PHMJEDCH_01417	1.41e-142	ypjP	-	-	S	-	-	-	YpjP-like protein
PHMJEDCH_01418	2.08e-202	thyA	2.1.1.45	-	F	ko:K00560	ko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523	ko00000,ko00001,ko00002,ko01000	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
PHMJEDCH_01419	6.3e-110	dfrA	1.5.1.3	-	H	ko:K00287	ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523	ko00000,ko00001,ko00002,ko01000	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
PHMJEDCH_01420	9.83e-141	ypkP	2.3.1.51	-	I	ko:K00655	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family
PHMJEDCH_01421	7.14e-141	yplQ	-	-	S	ko:K11068	-	ko00000,ko02042	protein, Hemolysin III
PHMJEDCH_01422	1.54e-207	yplP	-	-	K	-	-	-	Transcriptional regulator
PHMJEDCH_01423	7.88e-305	ilvA	4.3.1.19	-	E	ko:K01754	ko00260,ko00290,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00290,map01100,map01110,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
PHMJEDCH_01424	1.05e-53	ypmP	-	-	S	-	-	-	Protein of unknown function (DUF2535)
PHMJEDCH_01425	2.24e-131	ypmQ	-	-	S	ko:K07152	-	ko00000,ko03029	protein SCO1 SenC PrrC, involved in biogenesis of respiratory and photosynthetic systems
PHMJEDCH_01426	3.62e-167	ypmR	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase
PHMJEDCH_01427	2.45e-122	ypmS	-	-	S	-	-	-	protein conserved in bacteria
PHMJEDCH_01428	1.42e-88	ypoP	-	-	K	-	-	-	transcriptional
PHMJEDCH_01429	1.34e-130	msrB	1.8.4.11, 1.8.4.12	-	O	ko:K07304,ko:K12267	-	ko00000,ko01000	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PHMJEDCH_01430	2.47e-101	msrB	1.8.4.12	-	O	ko:K07305	-	ko00000,ko01000	peptide methionine sulfoxide reductase
PHMJEDCH_01431	1.29e-129	-	-	-	GM	ko:K19421	-	ko00000	Polysaccharide biosynthesis protein
PHMJEDCH_01432	6.94e-262	yokA	-	-	L	-	-	-	Recombinase
PHMJEDCH_01433	6.05e-22	-	-	-	S	-	-	-	Regulatory protein YrvL
PHMJEDCH_01435	5.97e-151	lctO	1.13.12.4	-	C	ko:K00467,ko:K10530	ko00620,map00620	ko00000,ko00001,ko01000	FMN-dependent dehydrogenase
PHMJEDCH_01438	5.78e-91	-	-	-	GM	ko:K19421	-	ko00000	Polysaccharide biosynthesis protein
PHMJEDCH_01439	5.79e-269	phy	3.1.3.8	-	I	ko:K01083	ko00562,map00562	ko00000,ko00001,ko01000	Myo-inositol-hexaphosphate 3-phosphohydrolase
PHMJEDCH_01440	3.73e-214	cgeB	-	-	S	ko:K06320	-	ko00000	Spore maturation protein
PHMJEDCH_01441	9.24e-83	cgeA	-	-	-	ko:K06319	-	ko00000	-
PHMJEDCH_01442	4.04e-54	cgeC	-	-	-	ko:K06321	-	ko00000	-
PHMJEDCH_01443	7.04e-288	cgeD	-	-	M	ko:K06322	-	ko00000	maturation of the outermost layer of the spore
PHMJEDCH_01444	7.99e-176	yiiD	-	-	K	ko:K06323	-	ko00000	acetyltransferase
PHMJEDCH_01446	8.69e-84	-	-	-	L	-	-	-	Bacterial transcription activator, effector binding domain
PHMJEDCH_01448	7.19e-298	yodT	-	-	H	-	-	-	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
PHMJEDCH_01449	1.05e-155	atoD	2.8.3.8, 2.8.3.9	-	I	ko:K01034	ko00310,ko00627,ko00640,ko00650,ko01100,ko01120,ko02020,map00310,map00627,map00640,map00650,map01100,map01120,map02020	ko00000,ko00001,ko01000	COG1788 Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
PHMJEDCH_01450	8.26e-154	atoA	2.8.3.8, 2.8.3.9	-	I	ko:K01035	ko00310,ko00627,ko00640,ko00650,ko01100,ko01120,ko02020,map00310,map00627,map00640,map00650,map01100,map01120,map02020	ko00000,ko00001,ko01000	COG2057 Acyl CoA acetate 3-ketoacid CoA transferase, beta subunit
PHMJEDCH_01451	6.72e-316	yodQ	3.5.1.16, 3.5.1.18	-	E	ko:K01438,ko:K01439	ko00220,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00220,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Acetylornithine deacetylase
PHMJEDCH_01452	4.82e-180	yodP	2.3.1.264	-	K	ko:K21935	-	ko00000,ko01000	Acetyltransferase (GNAT) family
PHMJEDCH_01453	0.0	kamA	5.4.3.2	-	E	ko:K01843	ko00310,map00310	ko00000,ko00001,ko01000	lysine 2,3-aminomutase
PHMJEDCH_01454	6.45e-59	yokU	-	-	S	-	-	-	YokU-like protein, putative antitoxin
PHMJEDCH_01455	2.87e-47	yozE	-	-	S	-	-	-	Belongs to the UPF0346 family
PHMJEDCH_01456	1.39e-66	-	-	-	E	-	-	-	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PHMJEDCH_01457	1.18e-155	yodN	-	-	-	-	-	-	-
PHMJEDCH_01459	1.97e-33	yozD	-	-	S	-	-	-	YozD-like protein
PHMJEDCH_01460	8.36e-131	yodM	3.6.1.27	-	I	ko:K19302	ko00550,map00550	ko00000,ko00001,ko01000,ko01011	Acid phosphatase homologues
PHMJEDCH_01461	1.16e-72	yodL	-	-	S	-	-	-	YodL-like
PHMJEDCH_01463	4.29e-161	deoD	2.4.2.1	-	F	ko:K03784	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	Purine nucleoside phosphorylase
PHMJEDCH_01464	8.69e-190	yodJ	3.4.17.14	-	M	ko:K07260	ko00550,ko01100,ko01502,ko02020,map00550,map01100,map01502,map02020	ko00000,ko00001,ko00002,ko01000,ko01002,ko01011,ko01504	D-alanyl-D-alanine carboxypeptidase
PHMJEDCH_01465	2.3e-30	yodI	-	-	-	-	-	-	-
PHMJEDCH_01466	4.97e-156	yodH	-	-	Q	-	-	-	Methyltransferase
PHMJEDCH_01467	0.0	ctpA	3.4.21.102	-	M	ko:K03797	-	ko00000,ko01000,ko01002	Belongs to the peptidase S41A family
PHMJEDCH_01468	3.79e-164	yydK	-	-	K	ko:K03489	-	ko00000,ko03000	Transcriptional regulator
PHMJEDCH_01469	0.0	bglA	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
PHMJEDCH_01470	0.0	-	3.2.1.45	GH30	M	ko:K01201	ko00511,ko00600,ko01100,ko04142,map00511,map00600,map01100,map04142	ko00000,ko00001,ko01000	Glycosyl hydrolase family 30 beta sandwich domain
PHMJEDCH_01471	0.0	yodF	-	-	E	ko:K03307	-	ko00000	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
PHMJEDCH_01472	1.14e-27	-	-	-	S	-	-	-	Protein of unknown function (DUF3311)
PHMJEDCH_01473	5.32e-213	yodE	-	-	E	ko:K15975	-	ko00000	COG0346 Lactoylglutathione lyase and related lyases
PHMJEDCH_01474	1.35e-137	yahD	-	-	S	ko:K06999	-	ko00000	Carboxylesterase
PHMJEDCH_01475	5.26e-136	yodC	-	-	C	-	-	-	nitroreductase
PHMJEDCH_01476	1.93e-69	yodB	-	-	K	-	-	-	transcriptional
PHMJEDCH_01477	9.37e-83	iolK	-	-	S	-	-	-	tautomerase
PHMJEDCH_01479	1.83e-101	yozR	-	-	S	-	-	-	COG0071 Molecular chaperone (small heat shock protein)
PHMJEDCH_01480	3.04e-203	rarD	-	-	S	ko:K05786	-	ko00000,ko02000	-transporter
PHMJEDCH_01481	3.66e-31	-	-	-	-	-	-	-	-
PHMJEDCH_01482	4.69e-79	yojF	-	-	S	-	-	-	Protein of unknown function (DUF1806)
PHMJEDCH_01483	2.61e-161	yojG	-	-	S	ko:K22135	-	ko00000,ko01000	deacetylase
PHMJEDCH_01484	6.24e-187	-	-	-	T	ko:K17763	-	ko00000,ko03021	COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)
PHMJEDCH_01485	1.51e-297	norM	-	-	V	ko:K03327	-	ko00000,ko02000	Multidrug efflux pump
PHMJEDCH_01486	3.97e-136	dacB	2.7.7.85	-	S	ko:K18672	-	ko00000,ko01000	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
PHMJEDCH_01487	1.97e-277	-	-	-	CG	-	-	-	UDP-glucoronosyl and UDP-glucosyl transferase
PHMJEDCH_01488	1.68e-276	-	-	CBM50	M	ko:K19220,ko:K19223,ko:K19224	-	ko00000,ko01000,ko01002,ko01011	COG1388 FOG LysM repeat
PHMJEDCH_01489	2.75e-137	sodC	1.15.1.1	-	P	ko:K04565	ko04146,ko04213,ko05014,ko05016,ko05020,map04146,map04213,map05014,map05016,map05020	ko00000,ko00001,ko01000	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
PHMJEDCH_01490	2e-207	yojN	-	-	S	ko:K04748	-	ko00000	ATPase family associated with various cellular activities (AAA)
PHMJEDCH_01491	0.0	yojO	-	-	P	-	-	-	Von Willebrand factor
PHMJEDCH_01492	0.0	odhA	1.2.4.2	-	C	ko:K00164	ko00020,ko00310,ko00380,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00310,map00380,map01100,map01110,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000	The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2). It contains multiple copies of three enzymatic components 2- oxoglutarate dehydrogenase (E1), dihydrolipoamide succinyltransferase (E2) and lipoamide dehydrogenase (E3)
PHMJEDCH_01493	1.12e-257	odhB	2.3.1.61	-	C	ko:K00658	ko00020,ko00310,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00310,map01100,map01110,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000	The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2)
PHMJEDCH_01494	3.22e-164	-	-	-	S	-	-	-	Metallo-beta-lactamase superfamily
PHMJEDCH_01495	3.93e-208	yocS	-	-	S	ko:K03453	-	ko00000	-transporter
PHMJEDCH_01496	3.13e-293	yocR	-	-	S	ko:K03308	-	ko00000	Belongs to the sodium neurotransmitter symporter (SNF) (TC 2.A.22) family
PHMJEDCH_01497	5.12e-207	sodF	1.15.1.1	-	P	ko:K04564	ko04013,ko04068,ko04146,ko04211,ko04212,ko04213,ko05016,map04013,map04068,map04146,map04211,map04212,map04213,map05016	ko00000,ko00001,ko01000	Superoxide dismutase
PHMJEDCH_01498	0.0	sqhC	4.2.1.137	-	I	ko:K18115	-	ko00000,ko01000	COG1657 Squalene cyclase
PHMJEDCH_01499	0.0	dhaS	1.2.1.3, 1.2.1.39	-	C	ko:K00128,ko:K00146	ko00010,ko00053,ko00071,ko00280,ko00310,ko00330,ko00340,ko00360,ko00380,ko00410,ko00561,ko00620,ko00625,ko00643,ko00903,ko00981,ko01100,ko01110,ko01120,ko01130,map00010,map00053,map00071,map00280,map00310,map00330,map00340,map00360,map00380,map00410,map00561,map00620,map00625,map00643,map00903,map00981,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the aldehyde dehydrogenase family
PHMJEDCH_01500	4.69e-43	yozC	-	-	-	-	-	-	-
PHMJEDCH_01501	5.32e-75	yozO	-	-	S	-	-	-	Bacterial PH domain
PHMJEDCH_01502	1.83e-49	yocN	-	-	-	-	-	-	-
PHMJEDCH_01503	1.13e-58	yozN	-	-	-	-	-	-	-
PHMJEDCH_01504	2.21e-114	yocM	-	-	O	ko:K13993	ko04141,map04141	ko00000,ko00001,ko03110	Belongs to the small heat shock protein (HSP20) family
PHMJEDCH_01505	1.16e-11	yocN	-	-	-	-	-	-	-
PHMJEDCH_01507	7.44e-78	yocK	-	-	T	-	-	-	general stress protein
PHMJEDCH_01508	2.71e-143	azoR	-	-	I	ko:K01118	-	ko00000,ko01000	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
PHMJEDCH_01510	0.0	recQ	3.6.4.12	-	L	ko:K03654	ko03018,map03018	ko00000,ko00001,ko01000,ko03400	DNA helicase
PHMJEDCH_01511	6.61e-157	yocH	-	-	M	-	-	-	COG1388 FOG LysM repeat
PHMJEDCH_01513	8.07e-233	yocD	3.4.17.13	-	V	ko:K01297	-	ko00000,ko01000,ko01002,ko01011	peptidase S66
PHMJEDCH_01514	2.99e-119	yocC	-	-	-	-	-	-	-
PHMJEDCH_01515	2.97e-173	-	-	-	J	-	-	-	Protein required for attachment to host cells
PHMJEDCH_01516	5.42e-117	yozB	-	-	S	ko:K08976	-	ko00000	membrane
PHMJEDCH_01517	5.45e-154	yocA	-	-	M	-	-	-	COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains)
PHMJEDCH_01518	3.14e-72	czrA	-	-	K	ko:K22043	-	ko00000,ko03000	transcriptional
PHMJEDCH_01519	1.51e-116	yobW	-	-	-	-	-	-	-
PHMJEDCH_01520	1.22e-159	yobT	-	-	S	-	-	-	COG0491 Zn-dependent hydrolases, including glyoxylases
PHMJEDCH_01521	1.44e-110	yobS	-	-	K	-	-	-	Transcriptional regulator
PHMJEDCH_01522	6.26e-156	yobQ	-	-	K	-	-	-	helix_turn_helix, arabinose operon control protein
PHMJEDCH_01523	2.04e-68	csaA	-	-	J	ko:K06878	-	ko00000	tRNA-binding protein
PHMJEDCH_01527	2.96e-49	-	-	-	-	-	-	-	-
PHMJEDCH_01528	1.5e-124	-	-	-	K	-	-	-	helix_turn_helix multiple antibiotic resistance protein
PHMJEDCH_01530	7.68e-37	yoaF	-	-	-	-	-	-	-
PHMJEDCH_01531	0.0	yoaE	-	-	C	-	-	-	belongs to the prokaryotic molybdopterin-containing oxidoreductase family
PHMJEDCH_01532	8.38e-238	yoaD	1.1.1.399, 1.1.1.95	-	EH	ko:K00058	ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PHMJEDCH_01533	0.0	lsrK	2.7.1.189	-	G	ko:K11216	ko02024,map02024	ko00000,ko00001,ko01000	FGGY family of carbohydrate kinases, C-terminal domain
PHMJEDCH_01534	1.18e-261	yoaB	-	-	EGP	-	-	-	the major facilitator superfamily
PHMJEDCH_01535	1.2e-147	yoxB	-	-	-	-	-	-	-
PHMJEDCH_01536	1.23e-49	-	-	-	S	-	-	-	protein containing a divergent version of the methyl-accepting chemotaxis-like domain
PHMJEDCH_01537	4.03e-156	fabG	1.1.1.100	-	S	ko:K00059,ko:K07124	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Belongs to the short-chain dehydrogenases reductases (SDR) family
PHMJEDCH_01538	6.69e-81	rtp	-	-	K	-	-	-	Plays a role in DNA replication and termination (fork arrest mechanism). Two dimers of rtp bind to the two inverted repeat regions (IRI and IRII) present in the termination site. The binding of each dimer is centered on an 8 bp direct repeat
PHMJEDCH_01539	5.78e-173	proC	1.5.1.2	-	E	ko:K00286	ko00330,ko01100,ko01110,ko01130,ko01230,map00330,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
PHMJEDCH_01540	3.37e-251	proB	2.7.2.11	-	E	ko:K00931	ko00330,ko00332,ko01100,ko01130,ko01230,map00330,map00332,map01100,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
PHMJEDCH_01541	7.74e-201	gltC	-	-	K	ko:K09681	-	ko00000,ko03000	Transcriptional regulator
PHMJEDCH_01542	0.0	gltA	1.4.1.13, 1.4.1.14, 1.4.7.1	-	E	ko:K00265,ko:K00284	ko00250,ko00630,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00250,map00630,map00910,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko01000	glutamate synthase
PHMJEDCH_01543	0.0	gltD	1.4.1.13, 1.4.1.14	-	E	ko:K00266	ko00250,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00250,map00910,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko01000	COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases
PHMJEDCH_01544	5.73e-60	-	-	-	S	-	-	-	Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME)
PHMJEDCH_01545	1.88e-225	yogA	-	-	C	ko:K13955	-	ko00000	COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases
PHMJEDCH_01546	8.19e-187	gltR1	-	-	K	ko:K21959	-	ko00000,ko03000	Transcriptional regulator
PHMJEDCH_01547	0.0	thrS	6.1.1.3	-	J	ko:K01868	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
PHMJEDCH_01548	1.91e-66	-	-	-	K	-	-	-	Helix-turn-helix domain
PHMJEDCH_01549	2.7e-246	-	-	-	EGP	ko:K08164	-	ko00000,ko02000	-transporter
PHMJEDCH_01550	0.0	ggt	2.3.2.2, 3.4.19.13	-	E	ko:K00681	ko00430,ko00460,ko00480,ko01100,map00430,map00460,map00480,map01100	ko00000,ko00001,ko01000,ko01002	gamma-glutamyltransferase
PHMJEDCH_01551	7.83e-46	yoeD	-	-	G	-	-	-	Helix-turn-helix domain
PHMJEDCH_01552	7.69e-123	-	-	-	L	-	-	-	Integrase
PHMJEDCH_01554	2.04e-122	yoeB	-	-	S	-	-	-	IseA DL-endopeptidase inhibitor
PHMJEDCH_01555	9.25e-306	yoeA	-	-	V	-	-	-	MATE efflux family protein
PHMJEDCH_01556	3.16e-229	yoxA	5.1.3.3	-	G	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Aldose 1-epimerase
PHMJEDCH_01557	0.0	dacC	3.4.16.4	-	M	ko:K07259	ko00550,map00550	ko00000,ko00001,ko01000,ko01002,ko01011	D-alanyl-D-alanine carboxypeptidase
PHMJEDCH_01558	0.0	-	-	-	Q	ko:K15664,ko:K15666,ko:K15667	ko01054,map01054	ko00000,ko00001,ko01008	Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PHMJEDCH_01559	0.0	-	-	-	Q	ko:K15656,ko:K15668	ko01054,ko02024,map01054,map02024	ko00000,ko00001,ko01008	D-alanine [D-alanyl carrier protein] ligase activity
PHMJEDCH_01560	9.31e-83	yngL	-	-	S	-	-	-	Protein of unknown function (DUF1360)
PHMJEDCH_01561	0.0	yngK	-	-	T	-	-	-	Glycosyl hydrolase-like 10
PHMJEDCH_01562	6.97e-264	yngJ	1.3.8.1	-	I	ko:K00248	ko00071,ko00280,ko00650,ko01100,ko01110,ko01120,ko01200,ko01212,map00071,map00280,map00650,map01100,map01110,map01120,map01200,map01212	ko00000,ko00001,ko01000	acyl-CoA dehydrogenase
PHMJEDCH_01563	0.0	yngI	-	-	IQ	ko:K00666	-	ko00000,ko01000,ko01004	COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II
PHMJEDCH_01564	1.6e-304	yngH	6.3.4.14, 6.4.1.2	-	I	ko:K01961	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002,ko01000	Biotin carboxylase
PHMJEDCH_01565	2.28e-40	-	-	-	I	ko:K02160	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002	Biotin carboxyl carrier protein
PHMJEDCH_01566	2.16e-208	yngG	4.1.3.4	-	E	ko:K01640	ko00072,ko00280,ko00281,ko00650,ko01100,ko04146,map00072,map00280,map00281,map00650,map01100,map04146	ko00000,ko00001,ko00002,ko01000	Hydroxymethylglutaryl-CoA lyase
PHMJEDCH_01567	2.54e-171	yngF	-	-	I	-	-	-	Belongs to the enoyl-CoA hydratase isomerase family
PHMJEDCH_01568	0.0	yngE	-	-	I	-	-	-	COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta)
PHMJEDCH_01569	6.22e-134	yngC	-	-	S	-	-	-	SNARE associated Golgi protein
PHMJEDCH_01570	1.01e-196	yngB	2.7.7.9	-	M	ko:K00963	ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	UTP-glucose-1-phosphate uridylyltransferase
PHMJEDCH_01571	1.02e-88	yngA	-	-	S	-	-	-	membrane
PHMJEDCH_01572	8.22e-171	bioW	6.2.1.14	-	H	ko:K01906	ko00780,ko01100,map00780,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the transformation of pimelate into pimeloyl- CoA with concomitant hydrolysis of ATP to AMP
PHMJEDCH_01573	0.0	bioA	2.6.1.105, 2.6.1.62	-	H	ko:K00833,ko:K19563	ko00780,ko01100,map00780,map01100	ko00000,ko00001,ko00002,ko01000,ko01007	Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor
PHMJEDCH_01574	3.12e-254	bioF	2.3.1.29, 2.3.1.47	-	H	ko:K00639,ko:K00652	ko00260,ko00780,ko01100,map00260,map00780,map01100	ko00000,ko00001,ko00002,ko01000,ko01007	Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide
PHMJEDCH_01575	7.37e-158	bioD	6.3.3.3	-	H	ko:K01935	ko00780,ko01100,map00780,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
PHMJEDCH_01576	5.98e-242	bioB	2.8.1.6	-	H	ko:K01012	ko00780,ko01100,map00780,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
PHMJEDCH_01577	6.2e-207	bioI	1.14.14.46	-	C	ko:K15468,ko:K16593	ko00780,ko01100,map00780,map01100	ko00000,ko00001,ko00002,ko00199,ko01000,ko01008	Cytochrome P450
PHMJEDCH_01578	2.71e-144	scoA	2.8.3.5	-	I	ko:K01028	ko00072,ko00280,ko00650,map00072,map00280,map00650	ko00000,ko00001,ko01000	COG1788 Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
PHMJEDCH_01579	6.43e-136	scoB	2.8.3.5	-	I	ko:K01029	ko00072,ko00280,ko00650,map00072,map00280,map00650	ko00000,ko00001,ko01000	COG2057 Acyl CoA acetate 3-ketoacid CoA transferase, beta subunit
PHMJEDCH_01580	1.26e-156	yxjF	1.1.1.30	-	IQ	ko:K00019	ko00072,ko00650,ko01100,map00072,map00650,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetoacetate from 3-hydroxybutyrate
PHMJEDCH_01581	3.84e-262	fabD	2.3.1.39	-	I	ko:K00645,ko:K15327,ko:K15329	ko00061,ko00333,ko01100,ko01130,ko01212,map00061,map00333,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004,ko01008	malonyl CoA-acyl carrier protein transacylase
PHMJEDCH_01582	0.0	nrsA	-	-	Q	ko:K15661	ko01054,map01054	ko00000,ko00001,ko01008	Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PHMJEDCH_01583	0.0	-	-	-	Q	ko:K15662,ko:K15663	ko01054,map01054	ko00000,ko00001,ko01008	Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PHMJEDCH_01584	0.0	-	-	-	Q	ko:K15662,ko:K15663	ko01054,map01054	ko00000,ko00001,ko01008	Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PHMJEDCH_01585	0.0	xynD	3.2.1.55	CBM6,GH43	G	ko:K15921	ko00520,map00520	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 43 family
PHMJEDCH_01586	2.01e-303	-	3.2.1.136	GH5	M	ko:K15924	-	ko00000,ko01000	Belongs to the glycosyl hydrolase 30 family
PHMJEDCH_01587	1.84e-155	-	-	-	T	-	-	-	Transcriptional regulatory protein, C terminal
PHMJEDCH_01588	3.49e-282	-	-	-	T	-	-	-	Histidine kinase
PHMJEDCH_01589	2.03e-67	yvlA	-	-	S	-	-	-	Domain of unknown function (DUF4870)
PHMJEDCH_01590	0.0	yndJ	-	-	S	-	-	-	YndJ-like protein
PHMJEDCH_01591	2.24e-99	-	-	-	S	-	-	-	Domain of unknown function (DUF4166)
PHMJEDCH_01592	1.56e-28	yndG	-	-	S	-	-	-	DoxX-like family
PHMJEDCH_01593	0.0	alsT	-	-	E	ko:K03310,ko:K11626	ko02020,map02020	ko00000,ko00001	Sodium alanine symporter
PHMJEDCH_01594	2.04e-60	ynfC	-	-	-	-	-	-	-
PHMJEDCH_01595	2.21e-19	-	-	-	-	-	-	-	-
PHMJEDCH_01596	0.0	parC	-	-	L	ko:K02621	-	ko00000,ko01000,ko02048,ko03032,ko03036	Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PHMJEDCH_01597	0.0	parE	-	-	L	ko:K02622	-	ko00000,ko01000,ko02048,ko03032,ko03036	Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PHMJEDCH_01598	1.41e-89	yneT	-	-	S	ko:K06929	-	ko00000	CoA-binding protein
PHMJEDCH_01599	1.51e-119	plsY	2.3.1.15	-	I	ko:K08591	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
PHMJEDCH_01600	4.47e-56	yneR	-	-	S	-	-	-	Belongs to the HesB IscA family
PHMJEDCH_01601	5.95e-65	yneQ	-	-	-	-	-	-	-
PHMJEDCH_01602	8.11e-95	yneP	-	-	S	ko:K07107	-	ko00000,ko01000	Thioesterase-like superfamily
PHMJEDCH_01603	4.08e-43	tlp	-	-	S	ko:K06434	-	ko00000	Belongs to the Tlp family
PHMJEDCH_01605	4.36e-114	yneN	-	-	CO	-	-	-	alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
PHMJEDCH_01606	0.0	citB	4.2.1.3	-	C	ko:K01681	ko00020,ko00630,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
PHMJEDCH_01607	6.2e-22	sspO	-	-	S	ko:K06432	-	ko00000	Belongs to the SspO family
PHMJEDCH_01608	1.97e-27	sspP	-	-	S	ko:K06433	-	ko00000	Belongs to the SspP family
PHMJEDCH_01609	2.64e-77	cotM	-	-	O	ko:K06335	-	ko00000	Spore coat protein
PHMJEDCH_01610	4.28e-92	yneK	-	-	S	-	-	-	Protein of unknown function (DUF2621)
PHMJEDCH_01611	4.39e-96	yneJ	-	-	O	-	-	-	COG4846 Membrane protein involved in cytochrome C biogenesis
PHMJEDCH_01612	4.11e-75	ccdB	-	-	T	ko:K03413	ko02020,ko02030,map02020,map02030	ko00000,ko00001,ko00002,ko02022,ko02035	cheY-homologous receiver domain
PHMJEDCH_01613	1.38e-158	ccdA	-	-	O	ko:K06196	-	ko00000,ko02000	cytochrome c biogenesis protein
PHMJEDCH_01614	8.06e-33	ynzD	-	-	S	-	-	-	Spo0E like sporulation regulatory protein
PHMJEDCH_01615	6.2e-39	yneF	-	-	S	ko:K09976	-	ko00000	UPF0154 protein
PHMJEDCH_01616	3.48e-103	yneE	-	-	S	-	-	-	Sporulation inhibitor of replication protein sirA
PHMJEDCH_01617	0.0	tkt	2.2.1.1	-	G	ko:K00615	ko00030,ko00710,ko01051,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01051,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
PHMJEDCH_01618	2.33e-43	ynzC	-	-	S	-	-	-	UPF0291 protein
PHMJEDCH_01619	4.8e-141	yneB	-	-	L	-	-	-	resolvase
PHMJEDCH_01620	4.8e-66	yneA	-	-	D	-	-	-	Inhibits cell division during the SOS response. Affects a later stage of the cell division protein assembly, after the assembly of the Z ring, by probably suppressing recruitment of FtsL and or DivIC to the division machinery
PHMJEDCH_01621	7.8e-142	lexA	3.4.21.88	-	K	ko:K01356	-	ko00000,ko00002,ko01000,ko01002,ko03400	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
PHMJEDCH_01623	2.23e-86	yndM	-	-	S	-	-	-	Protein of unknown function (DUF2512)
PHMJEDCH_01624	4.95e-182	-	-	-	O	-	-	-	COG0330 Membrane protease subunits, stomatin prohibitin homologs
PHMJEDCH_01625	4.12e-10	-	-	-	-	-	-	-	-
PHMJEDCH_01626	2.53e-162	yndL	-	-	S	-	-	-	Replication protein
PHMJEDCH_01627	3.99e-33	-	-	-	S	-	-	-	Domain of unknown function (DUF4177)
PHMJEDCH_01628	9.69e-99	yncF	3.6.1.23	-	F	ko:K01520	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Deoxyuridine 5'-triphosphate
PHMJEDCH_01629	1.33e-43	-	-	-	S	-	-	-	TM2 domain
PHMJEDCH_01630	0.0	yobO	-	-	M	-	-	-	Pectate lyase superfamily protein
PHMJEDCH_01632	1.97e-119	yvgO	-	-	-	-	-	-	-
PHMJEDCH_01633	9.32e-06	-	-	-	S	-	-	-	Protein of unknown function (Tiny_TM_bacill)
PHMJEDCH_01634	3.2e-150	-	-	AA10,CBM73	S	ko:K03933	-	ko00000	Pfam:Chitin_bind_3
PHMJEDCH_01635	1.34e-238	-	-	-	C	-	-	-	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
PHMJEDCH_01636	2.39e-130	-	-	-	S	-	-	-	Domain of unknown function (DUF3885)
PHMJEDCH_01638	1.87e-53	-	-	-	-	-	-	-	-
PHMJEDCH_01640	1.09e-117	-	-	-	J	-	-	-	Acetyltransferase (GNAT) domain
PHMJEDCH_01641	1.52e-164	yoaP	-	-	K	-	-	-	YoaP-like
PHMJEDCH_01642	1.69e-13	ywlA	-	-	S	-	-	-	Uncharacterised protein family (UPF0715)
PHMJEDCH_01643	1.95e-39	-	-	-	S	-	-	-	Protein of unknown function (DUF4025)
PHMJEDCH_01644	2.04e-10	-	-	-	-	-	-	-	-
PHMJEDCH_01645	5.82e-16	-	-	-	-	-	-	-	-
PHMJEDCH_01646	1.82e-231	adhP	1.1.1.1	-	C	ko:K00001,ko:K13953	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	alcohol dehydrogenase
PHMJEDCH_01647	1.08e-86	dinB	-	-	S	-	-	-	DinB family
PHMJEDCH_01649	0.000425	-	-	-	S	-	-	-	Protein of unknown function (Tiny_TM_bacill)
PHMJEDCH_01650	7.33e-250	-	-	-	S	ko:K06369	ko02024,map02024	ko00000,ko00001,ko01000	aspartate phosphatase
PHMJEDCH_01652	3.77e-225	bdhA	1.1.1.264, 1.1.1.303, 1.1.1.4	-	E	ko:K00004,ko:K00098	ko00650,map00650	ko00000,ko00001,ko01000	Dehydrogenase
PHMJEDCH_01653	7.81e-116	-	-	-	K	-	-	-	Transcriptional regulator, TetR family
PHMJEDCH_01654	0.0	pps	2.7.9.2	-	GT	ko:K01007	ko00620,ko00680,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	phosphoenolpyruvate synthase
PHMJEDCH_01655	4.44e-150	-	3.2.1.8	-	G	ko:K01181	-	ko00000,ko01000	Glycosyl hydrolases family 11
PHMJEDCH_01656	0.0	xylB	2.7.1.17	-	G	ko:K00854	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko00002,ko01000	xylulose kinase
PHMJEDCH_01657	0.0	xylA	5.3.1.5	-	G	ko:K01805	ko00040,ko00051,ko01100,map00040,map00051,map01100	ko00000,ko00001,ko01000	Belongs to the xylose isomerase family
PHMJEDCH_01658	6.16e-263	xylR	-	-	GK	-	-	-	ROK family
PHMJEDCH_01659	0.0	xynB	3.2.1.37	GH43	G	ko:K01198	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 43 family
PHMJEDCH_01660	8.41e-314	xynP	-	-	G	ko:K03292	-	ko00000	MFS/sugar transport protein
PHMJEDCH_01661	1.54e-271	cypA	1.14.14.46, 1.14.15.13	-	C	ko:K15468,ko:K16593,ko:K17474	ko00780,ko01100,map00780,map01100	ko00000,ko00001,ko00002,ko00199,ko01000,ko01008	Cytochrome P450
PHMJEDCH_01662	6.66e-151	xlnB	3.2.1.8	-	G	ko:K01181	-	ko00000,ko01000	Glycosyl hydrolases family 11
PHMJEDCH_01665	0.0	glnA	6.3.1.2	-	E	ko:K01915	ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727	ko00000,ko00001,ko01000,ko04147	glutamine synthetase
PHMJEDCH_01666	8.18e-86	glnR	-	-	K	ko:K03713,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000,ko03000	transcriptional
PHMJEDCH_01667	5.35e-307	ynbB	-	-	P	-	-	-	COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance
PHMJEDCH_01668	9.64e-289	hflX	-	-	S	ko:K03665	-	ko00000,ko03009	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
PHMJEDCH_01669	2.58e-225	spoVK	-	-	O	ko:K06413	-	ko00000	stage V sporulation protein K
PHMJEDCH_01670	2e-112	cwlC	3.5.1.28	-	M	ko:K01448	ko01503,map01503	ko00000,ko00001,ko00002,ko01000,ko01011,ko03036	n-acetylmuramoyl-L-alanine amidase
PHMJEDCH_01671	3.91e-05	cwlC	3.5.1.28	-	M	ko:K01448	ko01503,map01503	ko00000,ko00001,ko00002,ko01000,ko01011,ko03036	n-acetylmuramoyl-L-alanine amidase
PHMJEDCH_01672	2.21e-132	ymaB	-	-	S	-	-	-	MutT family
PHMJEDCH_01673	5.94e-237	nrdF	1.17.4.1	-	F	ko:K00526	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PHMJEDCH_01674	0.0	nrdE	1.17.4.1	-	F	ko:K00525	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PHMJEDCH_01675	4.43e-77	nrdI	-	-	F	ko:K03647	-	ko00000	Probably involved in ribonucleotide reductase function
PHMJEDCH_01676	2.31e-29	ymzA	-	-	-	-	-	-	-
PHMJEDCH_01677	1.87e-53	-	-	-	-	-	-	-	-
PHMJEDCH_01678	9e-46	hfq	-	-	J	ko:K03666	ko02024,ko03018,ko05111,map02024,map03018,map05111	ko00000,ko00001,ko03019,ko03036	RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs
PHMJEDCH_01679	7.19e-210	miaA	2.5.1.75	-	J	ko:K00791	ko00908,ko01100,ko01110,map00908,map01100,map01110	ko00000,ko00001,ko01000,ko01006,ko03016	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
PHMJEDCH_01680	9.08e-72	ymaF	-	-	S	-	-	-	YmaF family
PHMJEDCH_01682	1.17e-62	ebrA	-	-	P	ko:K11814	-	ko00000,ko00002,ko02000	Small Multidrug Resistance protein
PHMJEDCH_01683	1.76e-70	ebrB	-	-	P	ko:K03297,ko:K11814,ko:K11815	-	ko00000,ko00002,ko02000	Small Multidrug Resistance protein
PHMJEDCH_01684	9.17e-100	ymaD	-	-	O	-	-	-	redox protein, regulator of disulfide bond formation
PHMJEDCH_01685	3.08e-151	ymaC	-	-	S	-	-	-	Replication protein
PHMJEDCH_01686	2.64e-07	-	-	-	-	-	-	-	-
PHMJEDCH_01687	9.4e-317	aprX	-	-	O	ko:K17734	-	ko00000,ko01000,ko01002	Belongs to the peptidase S8 family
PHMJEDCH_01688	9.32e-81	ymzB	-	-	-	-	-	-	-
PHMJEDCH_01689	3.52e-149	yoaK	-	-	S	-	-	-	Membrane
PHMJEDCH_01690	3e-93	nucB	-	-	M	-	-	-	Deoxyribonuclease NucA/NucB
PHMJEDCH_01691	1.85e-282	cypA	1.14.14.46	-	C	ko:K15468,ko:K16593	ko00780,ko01100,map00780,map01100	ko00000,ko00001,ko00002,ko00199,ko01000,ko01008	Cytochrome P450
PHMJEDCH_01692	0.0	-	-	-	HQ	ko:K13615	-	ko00000,ko01004,ko01008	Beta-ketoacyl synthase
PHMJEDCH_01693	0.0	-	-	-	IQ	ko:K13611,ko:K13614	-	ko00000,ko01004,ko01008	polyketide synthase
PHMJEDCH_01694	0.0	-	-	-	Q	ko:K13612,ko:K13613	-	ko00000,ko01004,ko01008	Polyketide synthase of type I
PHMJEDCH_01695	0.0	-	-	-	Q	ko:K13612,ko:K13613	-	ko00000,ko01004,ko01008	Polyketide synthase of type I
PHMJEDCH_01696	0.0	-	-	-	IQ	ko:K13611,ko:K13614	-	ko00000,ko01004,ko01008	polyketide synthase
PHMJEDCH_01697	6.35e-176	pksI	-	-	I	ko:K15313	-	ko00000,ko01008	Belongs to the enoyl-CoA hydratase isomerase family
PHMJEDCH_01698	7.4e-179	-	-	-	I	ko:K15312	-	ko00000,ko01008	enoyl-CoA hydratase
PHMJEDCH_01699	9.98e-307	pksG	2.3.3.10	-	I	ko:K01641,ko:K15311	ko00072,ko00280,ko00650,ko00900,ko01100,ko01110,ko01130,map00072,map00280,map00650,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko01008	synthase
PHMJEDCH_01700	6.16e-48	acpK	-	-	IQ	ko:K15337	-	ko00000,ko01008	Phosphopantetheine attachment site
PHMJEDCH_01701	9.54e-60	fabD	2.3.1.39	-	I	ko:K00645,ko:K15327,ko:K15329	ko00061,ko00333,ko01100,ko01130,ko01212,map00061,map00333,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004,ko01008	malonyl CoA-acyl carrier protein transacylase
PHMJEDCH_01702	0.0	fabD	2.3.1.39	-	I	ko:K00645,ko:K15327,ko:K15329	ko00061,ko00333,ko01100,ko01130,ko01212,map00061,map00333,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004,ko01008	malonyl CoA-acyl carrier protein transacylase
PHMJEDCH_01703	9.59e-220	pksD	-	-	Q	ko:K15328	-	ko00000,ko01008	Acyl transferase domain
PHMJEDCH_01704	1.77e-202	fabD	2.3.1.39	-	I	ko:K00645,ko:K15327,ko:K15329	ko00061,ko00333,ko01100,ko01130,ko01212,map00061,map00333,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004,ko01008	malonyl CoA-acyl carrier protein transacylase
PHMJEDCH_01705	3.58e-160	pksB	3.1.2.6	-	S	ko:K01069	ko00620,map00620	ko00000,ko00001,ko01000	Polyketide biosynthesis
PHMJEDCH_01706	0.0	mutL	-	-	L	ko:K03572	ko03430,map03430	ko00000,ko00001,ko03400	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
PHMJEDCH_01707	0.0	mutS	-	-	L	ko:K03555	ko03430,map03430	ko00000,ko00001,ko03400	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
PHMJEDCH_01708	3.93e-116	cotE	-	-	S	ko:K06328	-	ko00000	Spore coat protein
PHMJEDCH_01709	2.37e-85	ymcA	3.6.3.21	-	S	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	Belongs to the UPF0342 family
PHMJEDCH_01710	0.0	miaB	2.8.4.3	-	J	ko:K06168	-	ko00000,ko01000,ko03016	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
PHMJEDCH_01711	7.6e-269	kbl	2.3.1.29, 2.3.1.47	-	H	ko:K00639,ko:K00652	ko00260,ko00780,ko01100,map00260,map00780,map01100	ko00000,ko00001,ko00002,ko01000,ko01007	Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide
PHMJEDCH_01712	1.32e-247	tdh	1.1.1.103	-	C	ko:K00060	ko00260,map00260	ko00000,ko00001,ko01000	Catalyzes the NAD( )-dependent oxidation of L-threonine to 2-amino-3-ketobutyrate
PHMJEDCH_01713	2.44e-49	spoVS	-	-	S	ko:K06416	-	ko00000	Stage V sporulation protein S
PHMJEDCH_01714	3.06e-195	ymdB	-	-	S	ko:K02029,ko:K02030,ko:K09769	-	ko00000,ko00002,ko02000	protein conserved in bacteria
PHMJEDCH_01715	2.91e-308	rny	-	-	S	ko:K18682	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	Endoribonuclease that initiates mRNA decay
PHMJEDCH_01716	4.31e-260	pbpX	-	-	V	-	-	-	Beta-lactamase
PHMJEDCH_01717	8.4e-237	recA	-	-	L	ko:K03553	ko03440,map03440	ko00000,ko00001,ko00002,ko03400	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
PHMJEDCH_01718	2.57e-291	cinA	3.5.1.42	-	S	ko:K03742,ko:K03743	ko00760,map00760	ko00000,ko00001,ko01000	Belongs to the CinA family
PHMJEDCH_01719	2.75e-131	pgsA	2.7.8.5	-	I	ko:K00995	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
PHMJEDCH_01720	2.26e-166	ymfM	-	-	S	ko:K15539	-	ko00000	protein conserved in bacteria
PHMJEDCH_01721	3.66e-182	ymfK	-	-	S	-	-	-	Protein of unknown function (DUF3388)
PHMJEDCH_01722	6.23e-56	ymfJ	-	-	S	-	-	-	Protein of unknown function (DUF3243)
PHMJEDCH_01723	1.13e-161	ymfI	1.1.1.100	-	S	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis
PHMJEDCH_01724	2.09e-303	ymfH	-	-	S	-	-	-	zinc protease
PHMJEDCH_01725	8.12e-300	albE	-	-	S	-	-	-	Peptidase M16
PHMJEDCH_01726	0.0	ydgH	-	-	S	ko:K06994	-	ko00000	drug exporters of the RND superfamily
PHMJEDCH_01727	7.8e-97	-	-	-	K	-	-	-	helix_turn_helix multiple antibiotic resistance protein
PHMJEDCH_01728	2.76e-290	ymfD	-	-	EGP	ko:K08221	-	ko00000,ko02000	COG0477 Permeases of the major facilitator superfamily
PHMJEDCH_01729	1.38e-166	ymfC	-	-	K	ko:K03710	-	ko00000,ko03000	Transcriptional regulator
PHMJEDCH_01730	0.0	ftsK	-	-	D	ko:K03466	-	ko00000,ko03036	Belongs to the FtsK SpoIIIE SftA family
PHMJEDCH_01731	7.4e-41	-	-	-	S	-	-	-	YlzJ-like protein
PHMJEDCH_01732	5.34e-165	tepA	-	-	OU	-	-	-	COG0740 Protease subunit of ATP-dependent Clp proteases
PHMJEDCH_01733	0.0	rnjB	-	-	S	ko:K12574	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PHMJEDCH_01734	7.2e-202	dapA	4.3.3.7	-	E	ko:K01714	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
PHMJEDCH_01735	1.83e-278	dapG	2.7.2.4	-	E	ko:K00928	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the aspartokinase family
PHMJEDCH_01736	5.33e-244	asd	1.2.1.11	-	E	ko:K00133	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
PHMJEDCH_01737	6.97e-131	spoVFB	-	-	H	ko:K06411	-	ko00000	Together with DpaA, catalyzes the conversion of dihydrodipicolinate to dipicolinate (DPA)
PHMJEDCH_01738	4.32e-202	dpaA	-	-	CH	ko:K06410	-	ko00000	Dipicolinate synthase subunit A
PHMJEDCH_01739	2.17e-56	ymxH	-	-	S	-	-	-	YlmC YmxH family
PHMJEDCH_01740	9.79e-298	mlpA	-	-	S	-	-	-	Belongs to the peptidase M16 family
PHMJEDCH_01741	2.3e-229	ylxY	-	-	G	-	-	-	Sporulation protein, polysaccharide deacetylase
PHMJEDCH_01742	0.0	pnp	2.7.7.8	-	J	ko:K00962	ko00230,ko00240,ko03018,map00230,map00240,map03018	ko00000,ko00001,ko00002,ko01000,ko03016,ko03019	Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction
PHMJEDCH_01743	4.12e-56	rpsO	-	-	J	ko:K02956	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
PHMJEDCH_01744	6.31e-224	ribF	2.7.1.26, 2.7.7.2	-	H	ko:K11753	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Belongs to the ribF family
PHMJEDCH_01745	2.64e-214	truB	5.4.99.25	-	J	ko:K03177,ko:K03483	-	ko00000,ko01000,ko03000,ko03016	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
PHMJEDCH_01746	1.03e-73	rbfA	-	-	J	ko:K02834	-	ko00000,ko03009	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
PHMJEDCH_01747	1.11e-59	ylxP	-	-	S	ko:K09764	-	ko00000	protein conserved in bacteria
PHMJEDCH_01748	0.0	infB	-	-	J	ko:K02519	-	ko00000,ko03012,ko03029	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
PHMJEDCH_01749	6.16e-63	ylxQ	-	-	J	-	-	-	ribosomal protein
PHMJEDCH_01750	6.76e-56	ylxR	-	-	K	ko:K07742	-	ko00000	nucleic-acid-binding protein implicated in transcription termination
PHMJEDCH_01751	1.35e-262	nusA	-	-	K	ko:K02600	-	ko00000,ko03009,ko03021	Participates in both transcription termination and antitermination
PHMJEDCH_01752	9.4e-105	rimP	-	-	S	ko:K09748	-	ko00000,ko03009	Required for maturation of 30S ribosomal subunits
PHMJEDCH_01753	0.0	polC	2.7.7.7	-	L	ko:K03763	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PHMJEDCH_01754	0.0	proS	6.1.1.15	-	J	ko:K01881	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
PHMJEDCH_01755	2.58e-293	rasP	-	-	M	ko:K11749	ko02024,ko04112,map02024,map04112	ko00000,ko00001,ko01000,ko01002	zinc metalloprotease
PHMJEDCH_01756	8.59e-271	dxr	1.1.1.267	-	I	ko:K00099	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP)
PHMJEDCH_01757	1.48e-176	cdsA	2.7.7.41	-	S	ko:K00981	ko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070	ko00000,ko00001,ko00002,ko01000	Belongs to the CDS family
PHMJEDCH_01758	2.49e-183	uppS	2.5.1.31	-	I	ko:K00806	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
PHMJEDCH_01759	2.64e-116	frr	-	-	J	ko:K02838	-	ko00000,ko03012	Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
PHMJEDCH_01760	7.09e-164	pyrH	2.7.4.22	-	F	ko:K09903	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphorylation of UMP to UDP
PHMJEDCH_01761	4.66e-200	tsf	-	-	J	ko:K02357	-	ko00000,ko03012,ko03029	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
PHMJEDCH_01762	1.74e-167	rpsB	-	-	J	ko:K02967	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uS2 family
PHMJEDCH_01763	1.47e-83	ylxL	-	-	-	-	-	-	-
PHMJEDCH_01764	3.96e-177	sigD	-	-	K	ko:K02405	ko02020,ko02025,ko02026,ko02040,ko05111,map02020,map02025,map02026,map02040,map05111	ko00000,ko00001,ko02035,ko03021	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
PHMJEDCH_01765	6.74e-112	cheD	3.5.1.44	-	NT	ko:K03411	ko02030,map02030	ko00000,ko00001,ko01000,ko02035	Deamidates glutamine residues to glutamate on methyl- accepting chemotaxis receptors (MCPs). CheD-mediated MCP deamidation is required for productive communication of the conformational signals of the chemoreceptors to the CheA kinase
PHMJEDCH_01766	1.39e-141	cheC	-	-	NT	ko:K03410	ko02030,map02030	ko00000,ko00001,ko02035	COG1776 Chemotaxis protein CheC, inhibitor of MCP methylation
PHMJEDCH_01767	1.01e-104	cheW	-	-	NT	ko:K03408	ko02020,ko02030,map02020,map02030	ko00000,ko00001,ko02035	COG0835 Chemotaxis signal transduction protein
PHMJEDCH_01768	0.0	cheA	2.7.13.3	-	NT	ko:K03407	ko02020,ko02030,map02020,map02030	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022,ko02035	COG0643 Chemotaxis protein histidine kinase and related kinases
PHMJEDCH_01769	2.95e-241	cheB	3.1.1.61, 3.5.1.44	-	NT	ko:K03412	ko02020,ko02030,map02020,map02030	ko00000,ko00001,ko00002,ko01000,ko02022,ko02035	catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR
PHMJEDCH_01770	1.43e-196	ylxH	-	-	D	ko:K04562	-	ko00000,ko02035	Belongs to the ParA family
PHMJEDCH_01771	4.59e-210	flhF	-	-	N	ko:K02404	-	ko00000,ko02035	Flagellar biosynthesis regulator FlhF
PHMJEDCH_01772	0.0	flhA	-	-	N	ko:K02400	ko02040,map02040	ko00000,ko00001,ko02035,ko02044	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
PHMJEDCH_01773	3.29e-238	flhB	-	-	N	ko:K02401	ko02040,map02040	ko00000,ko00001,ko02035,ko02044	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
PHMJEDCH_01774	4.51e-165	fliR	-	-	N	ko:K02421	ko02040,map02040	ko00000,ko00001,ko02035,ko02044	Flagellar biosynthetic protein FliR
PHMJEDCH_01775	9.02e-51	fliQ	-	-	N	ko:K02420	ko02040,map02040	ko00000,ko00001,ko02035,ko02044	Role in flagellar biosynthesis
PHMJEDCH_01776	1.21e-141	fliP	-	-	N	ko:K02419	ko02040,map02040	ko00000,ko00001,ko02035,ko02044	Plays a role in the flagellum-specific transport system
PHMJEDCH_01777	6.3e-142	fliZ	-	-	N	ko:K02418	ko02040,map02040	ko00000,ko00001,ko02035,ko02044	Flagellar biosynthesis protein, FliO
PHMJEDCH_01778	2.12e-77	cheY	-	-	T	ko:K03413	ko02020,ko02030,map02020,map02030	ko00000,ko00001,ko00002,ko02022,ko02035	response regulator
PHMJEDCH_01779	9.42e-231	fliY	-	-	N	ko:K02417	ko02030,ko02040,map02030,map02040	ko00000,ko00001,ko02035,ko02044	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
PHMJEDCH_01780	1.28e-228	fliM	-	-	N	ko:K02416	ko02030,ko02040,map02030,map02040	ko00000,ko00001,ko02035	One of the proteins that forms a switch complex that is proposed to be located at the base of the basal body. This complex interacts with chemotaxis proteins (such as CheY) in addition to contacting components of the motor that determine the direction of flagellar rotation
PHMJEDCH_01781	3.66e-78	fliL	-	-	N	ko:K02415	-	ko00000,ko02035	Controls the rotational direction of flagella during chemotaxis
PHMJEDCH_01782	2.56e-175	flgG	-	-	N	ko:K02390	ko02040,map02040	ko00000,ko00001,ko02035	Flagellar basal body rod
PHMJEDCH_01783	2.43e-90	flgD	-	-	N	ko:K02389	ko02040,map02040	ko00000,ko00001,ko02035	Flagellar basal body rod modification protein
PHMJEDCH_01784	7.87e-242	fliK	-	-	N	ko:K02414	ko02040,map02040	ko00000,ko00001,ko02035	Flagellar hook-length control protein
PHMJEDCH_01785	3.78e-76	ylxF	-	-	S	-	-	-	MgtE intracellular N domain
PHMJEDCH_01786	2.17e-92	fliJ	-	-	N	ko:K02413	ko02040,map02040	ko00000,ko00001,ko02035	Flagellar biosynthesis chaperone
PHMJEDCH_01787	2.02e-306	fliI	3.6.3.14	-	NU	ko:K02412	ko02040,map02040	ko00000,ko00001,ko01000,ko02035,ko02044	COG1157 Flagellar biosynthesis type III secretory pathway ATPase
PHMJEDCH_01788	6.92e-116	fliH	-	-	NU	ko:K02411	ko02040,map02040	ko00000,ko00001,ko02035,ko02044	COG1317 Flagellar biosynthesis type III secretory pathway protein
PHMJEDCH_01789	3.52e-229	fliG	-	-	N	ko:K02410	ko02030,ko02040,map02030,map02040	ko00000,ko00001,ko02035	One of the proteins that forms a switch complex that is proposed to be located at the base of the basal body. This complex interacts with chemotaxis proteins (such as CheY) in addition to contacting components of the motor that determine the direction of flagellar rotation
PHMJEDCH_01790	0.0	fliF	-	-	N	ko:K02409	ko02040,map02040	ko00000,ko00001,ko02035,ko02044	The M ring may be actively involved in energy transduction
PHMJEDCH_01791	1.51e-50	fliE	-	-	N	ko:K02408	ko02040,map02040	ko00000,ko00001,ko02035	Flagellar hook-basal body
PHMJEDCH_01792	1.46e-96	flgC	-	-	N	ko:K02388	ko02040,map02040	ko00000,ko00001,ko02035	Belongs to the flagella basal body rod proteins family
PHMJEDCH_01793	1.35e-47	flgB	-	-	N	ko:K02387	ko02040,map02040	ko00000,ko00001,ko02035	Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body
PHMJEDCH_01794	5.75e-20	flgB	-	-	N	ko:K02387	ko02040,map02040	ko00000,ko00001,ko02035	Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body
PHMJEDCH_01795	7.94e-175	codY	-	-	K	ko:K03706	-	ko00000,ko03000	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
PHMJEDCH_01796	0.0	hslU	-	-	O	ko:K03667	-	ko00000,ko03110	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
PHMJEDCH_01797	1.43e-118	hslV	3.4.25.2	-	O	ko:K01419	-	ko00000,ko01000,ko01002	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
PHMJEDCH_01798	1.42e-216	xerC	-	-	L	ko:K03733,ko:K04763	-	ko00000,ko03036	tyrosine recombinase XerC
PHMJEDCH_01799	1.05e-311	trmFO	2.1.1.74	-	J	ko:K04094	-	ko00000,ko01000,ko03016,ko03036	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
PHMJEDCH_01800	0.0	topA	5.99.1.2	-	L	ko:K03168	-	ko00000,ko01000,ko03032,ko03400	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
PHMJEDCH_01801	6.19e-208	dprA	-	-	LU	ko:K04096	-	ko00000	Rossmann fold nucleotide-binding protein involved in DNA uptake
PHMJEDCH_01802	7.59e-214	sucD	6.2.1.5	-	C	ko:K01902	ko00020,ko00640,ko00660,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00640,map00660,map00720,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
PHMJEDCH_01803	1.66e-269	sucC	6.2.1.5	-	C	ko:K01903	ko00020,ko00640,ko00660,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00640,map00660,map00720,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit
PHMJEDCH_01804	6.68e-57	ylqH	-	-	S	ko:K04061	-	ko00000,ko02044	homolog of the cytoplasmic domain of flagellar protein FhlB
PHMJEDCH_01805	0.0	ylqG	-	-	-	-	-	-	-
PHMJEDCH_01806	1.87e-171	rnhB	3.1.26.4	-	L	ko:K03470	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PHMJEDCH_01807	5.95e-202	rbgA	-	-	S	ko:K14540	-	ko00000,ko03009	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
PHMJEDCH_01808	8.14e-75	rplS	-	-	J	ko:K02884	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
PHMJEDCH_01809	2.22e-173	trmD	2.1.1.228	-	J	ko:K00554	-	ko00000,ko01000,ko03016	Belongs to the RNA methyltransferase TrmD family
PHMJEDCH_01810	4.17e-119	rimM	-	-	J	ko:K02860	-	ko00000,ko03009	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
PHMJEDCH_01811	8.03e-79	ylqD	-	-	S	-	-	-	YlqD protein
PHMJEDCH_01812	4.9e-49	ylqC	-	-	S	ko:K06960	-	ko00000	Belongs to the UPF0109 family
PHMJEDCH_01813	1.13e-58	rpsP	-	-	J	ko:K02959	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Belongs to the bacterial ribosomal protein bS16 family
PHMJEDCH_01814	2e-301	ffh	3.6.5.4	-	U	ko:K03106	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko01000,ko02044	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
PHMJEDCH_01815	1.97e-66	ylxM	-	-	S	ko:K09787	-	ko00000	Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
PHMJEDCH_01816	2.09e-221	ftsY	-	-	U	ko:K03110	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
PHMJEDCH_01817	0.0	smc	-	-	D	ko:K03529	-	ko00000,ko03036	Required for chromosome condensation and partitioning
PHMJEDCH_01818	2.48e-173	rnc	3.1.26.3	-	J	ko:K03685	ko03008,ko05205,map03008,map05205	ko00000,ko00001,ko01000,ko03009,ko03019,ko03036	Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
PHMJEDCH_01819	1.15e-43	acpP	-	-	IQ	ko:K02078	-	ko00000,ko00001	Carrier of the growing fatty acid chain in fatty acid biosynthesis
PHMJEDCH_01820	5.81e-166	fabG	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	reductase
PHMJEDCH_01821	2.08e-215	fabD	2.3.1.39	-	I	ko:K00645,ko:K15327,ko:K15329	ko00061,ko00333,ko01100,ko01130,ko01212,map00061,map00333,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004,ko01008	malonyl CoA-acyl carrier protein transacylase
PHMJEDCH_01822	2.58e-228	plsX	2.3.1.15	-	I	ko:K03621	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
PHMJEDCH_01823	2.96e-119	fapR	-	-	K	-	-	-	Transcriptional factor involved in regulation of membrane lipid biosynthesis by repressing genes involved in fatty acid and phospholipid metabolism
PHMJEDCH_01824	0.0	recG	3.6.4.12	-	L	ko:K03655	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
PHMJEDCH_01825	3.97e-200	sdaAA	4.3.1.17	-	E	ko:K01752	ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230	ko00000,ko00001,ko01000	L-serine dehydratase
PHMJEDCH_01826	1.69e-152	sdaAB	4.3.1.17	-	E	ko:K01752	ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230	ko00000,ko00001,ko01000	L-serine dehydratase
PHMJEDCH_01827	0.0	yloV	-	-	S	ko:K07030	-	ko00000	kinase related to dihydroxyacetone kinase
PHMJEDCH_01828	6.07e-77	yloU	-	-	S	-	-	-	protein conserved in bacteria
PHMJEDCH_01829	3.49e-36	rpmB	-	-	J	ko:K02902	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL28 family
PHMJEDCH_01830	5.45e-146	thiN	2.7.6.2	-	H	ko:K00949	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000	thiamine pyrophosphokinase
PHMJEDCH_01831	1.69e-148	rpe	5.1.3.1	-	G	ko:K01783	ko00030,ko00040,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the ribulose-phosphate 3-epimerase family
PHMJEDCH_01832	5.97e-209	rsgA	3.1.3.100	-	S	ko:K06949	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000,ko03009	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
PHMJEDCH_01833	0.0	prkC	2.7.11.1	-	KLT	ko:K08884,ko:K12132	-	ko00000,ko01000,ko01001	serine threonine protein kinase
PHMJEDCH_01834	2.84e-168	stp	3.1.3.16	-	T	ko:K20074	-	ko00000,ko01000,ko01009	phosphatase
PHMJEDCH_01835	3.58e-262	rlmN	2.1.1.192	-	J	ko:K06941	-	ko00000,ko01000,ko03009	Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs
PHMJEDCH_01836	6.91e-314	sun	2.1.1.176	-	J	ko:K03500	-	ko00000,ko01000,ko03009	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
PHMJEDCH_01837	6.66e-215	fmt	2.1.2.9	-	J	ko:K00604	ko00670,ko00970,map00670,map00970	ko00000,ko00001,ko01000	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
PHMJEDCH_01838	1.61e-107	def	3.5.1.88	-	J	ko:K01462	-	ko00000,ko01000	Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
PHMJEDCH_01839	0.0	priA	-	-	L	ko:K04066	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
PHMJEDCH_01840	2.84e-283	coaBC	4.1.1.36, 6.3.2.5	-	H	ko:K01598,ko:K13038	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
PHMJEDCH_01841	2.53e-38	rpoZ	2.7.7.6	-	K	ko:K03060	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
PHMJEDCH_01842	9.26e-142	gmk	2.7.4.8	-	F	ko:K00942	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko00002,ko01000	Essential for recycling GMP and indirectly, cGMP
PHMJEDCH_01843	2.3e-53	ylzA	-	-	S	ko:K09777	-	ko00000	Belongs to the UPF0296 family
PHMJEDCH_01844	3.26e-193	yloC	-	-	S	-	-	-	stress-induced protein
PHMJEDCH_01845	0.0	yloB	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	COG0474 Cation transport ATPase
PHMJEDCH_01846	0.0	FbpA	-	-	K	-	-	-	RNA-binding protein homologous to eukaryotic snRNP
PHMJEDCH_01847	0.0	-	3.2.1.1	GH13	G	ko:K01176	ko00500,ko01100,ko04973,map00500,map01100,map04973	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 13 family
PHMJEDCH_01848	1.85e-98	sirC	1.3.1.76, 4.99.1.4	-	H	ko:K02304	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	ko00000,ko00001,ko00002,ko01000	Siroheme synthase
PHMJEDCH_01849	1.13e-175	sirB	4.99.1.4	-	S	ko:K03794	ko00860,ko01100,ko01110,map00860,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Sirohydrochlorin ferrochelatase
PHMJEDCH_01850	6.08e-178	cobA	2.1.1.107	-	H	ko:K02303	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	ko00000,ko00001,ko00002,ko01000	Belongs to the precorrin methyltransferase family
PHMJEDCH_01851	1.31e-140	cysC	2.7.1.25	-	P	ko:K00860	ko00230,ko00920,ko01100,ko01120,map00230,map00920,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Catalyzes the synthesis of activated sulfate
PHMJEDCH_01852	5.92e-282	sat	2.7.7.4	-	P	ko:K00958	ko00230,ko00261,ko00450,ko00920,ko01100,ko01120,ko01130,map00230,map00261,map00450,map00920,map01100,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the sulfate adenylyltransferase family
PHMJEDCH_01853	5.26e-223	cysP	-	-	P	ko:K16331	-	ko00000,ko02000	phosphate transporter
PHMJEDCH_01854	7.81e-178	cysH	1.8.4.10, 1.8.4.8	-	EH	ko:K00390	ko00920,ko01100,ko01120,map00920,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Belongs to the PAPS reductase family. CysH subfamily
PHMJEDCH_01855	3.5e-146	pyrE	2.4.2.10	-	F	ko:K00762	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
PHMJEDCH_01856	2.37e-159	pyrF	4.1.1.23	-	F	ko:K01591	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
PHMJEDCH_01857	9.61e-218	pyrD	1.3.1.14	-	F	ko:K17828	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
PHMJEDCH_01858	2.68e-176	pyrK	-	-	C	ko:K02823	ko00240,ko01100,map00240,map01100	ko00000,ko00001	Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD( )
PHMJEDCH_01859	0.0	carB	6.3.5.5	-	F	ko:K01955	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the CarB family
PHMJEDCH_01860	4.71e-263	carA	6.3.5.5	-	F	ko:K01956	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthetase glutamine chain
PHMJEDCH_01861	1.67e-309	pyrC	3.5.2.3	-	F	ko:K01465	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
PHMJEDCH_01862	2.06e-204	pyrB	2.1.3.2	-	F	ko:K00609	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the ATCase OTCase family
PHMJEDCH_01863	8.98e-293	pyrP	-	-	F	ko:K02824	-	ko00000,ko02000	Xanthine uracil
PHMJEDCH_01864	2.21e-122	pyrR	2.4.2.9	-	F	ko:K02825	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000,ko03000	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
PHMJEDCH_01865	7.29e-214	rluD	5.4.99.23	-	J	ko:K06180	-	ko00000,ko01000,ko03009	Responsible for synthesis of pseudouridine from uracil
PHMJEDCH_01866	8.42e-102	lspA	3.4.23.36	-	MU	ko:K03101	ko03060,map03060	ko00000,ko00001,ko01000,ko01002	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
PHMJEDCH_01867	4.22e-83	ylyA	-	-	T	-	-	-	COG1734 DnaK suppressor protein
PHMJEDCH_01868	0.0	ileS	6.1.1.5	-	J	ko:K01870	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
PHMJEDCH_01869	1.85e-99	divIVA	-	-	D	ko:K04074	-	ko00000,ko03036	Cell division initiation protein
PHMJEDCH_01870	3.8e-176	ylmH	-	-	S	-	-	-	conserved protein, contains S4-like domain
PHMJEDCH_01871	5.12e-56	ylmG	-	-	S	ko:K02221	-	ko00000,ko02044	membrane
PHMJEDCH_01872	8.91e-83	sepF	-	-	D	ko:K09772	-	ko00000,ko03036	Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
PHMJEDCH_01873	6.55e-155	ylmE	-	-	S	ko:K06997	-	ko00000	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
PHMJEDCH_01874	3.85e-196	ylmD	-	-	S	ko:K05810	-	ko00000,ko01000	Belongs to the multicopper oxidase YfiH RL5 family
PHMJEDCH_01875	7.13e-52	ylmC	-	-	S	-	-	-	sporulation protein
PHMJEDCH_01876	1.67e-308	argE	-	-	E	ko:K20895	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000	Acetylornithine deacetylase
PHMJEDCH_01877	2.58e-183	ylmA	3.6.3.34	-	P	ko:K02013	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	COG1119 ABC-type molybdenum transport system, ATPase component photorepair protein PhrA
PHMJEDCH_01878	3.8e-178	sigG	-	-	K	ko:K03091	-	ko00000,ko03021	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
PHMJEDCH_01879	3.64e-161	sigE	-	-	K	ko:K03091	-	ko00000,ko03021	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
PHMJEDCH_01880	2.17e-213	spoIIGA	-	-	M	ko:K06383	-	ko00000,ko01000,ko01002	aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR
PHMJEDCH_01881	0.0	bpr	-	-	O	ko:K13276	-	ko00000,ko01000,ko01002,ko03110	COG1404 Subtilisin-like serine proteases
PHMJEDCH_01882	4.32e-259	ftsZ	-	-	D	ko:K03531	ko04112,map04112	ko00000,ko00001,ko02048,ko03036,ko04812	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
PHMJEDCH_01883	3.7e-297	ftsA	-	-	D	ko:K03590	ko04112,map04112	ko00000,ko00001,ko03036,ko04812	Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
PHMJEDCH_01884	1.07e-169	divIB	-	-	D	ko:K03589	ko04112,map04112	ko00000,ko00001,ko03036	Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
PHMJEDCH_01885	3.07e-210	murB	1.3.1.98	-	M	ko:K00075	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	cell wall formation
PHMJEDCH_01886	9.42e-258	murG	2.4.1.227	GT28	M	ko:K02563	ko00550,ko01100,ko01502,ko04112,map00550,map01100,map01502,map04112	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
PHMJEDCH_01887	2.7e-236	spoVE	-	-	D	ko:K03588	ko04112,map04112	ko00000,ko00001,ko02000,ko03036	Belongs to the SEDS family
PHMJEDCH_01888	0.0	murD	6.3.2.9	-	M	ko:K01925	ko00471,ko00550,ko01100,map00471,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
PHMJEDCH_01889	2.36e-220	mraY	2.7.8.13	-	M	ko:K01000	ko00550,ko01100,ko01502,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
PHMJEDCH_01890	0.0	murE	6.3.2.13	-	M	ko:K01928	ko00300,ko00550,map00300,map00550	ko00000,ko00001,ko01000,ko01011	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
PHMJEDCH_01891	0.0	spoVD	-	-	M	ko:K08384	ko00550,map00550	ko00000,ko00001,ko01011	stage V sporulation protein D
PHMJEDCH_01892	0.0	pbpX	-	-	M	ko:K08724,ko:K12552,ko:K12556	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01011	Penicillin-binding Protein
PHMJEDCH_01893	2.81e-67	ftsL	-	-	D	-	-	-	Essential cell division protein
PHMJEDCH_01894	1.66e-218	rsmH	2.1.1.199	-	J	ko:K03438	-	ko00000,ko01000,ko03009	Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
PHMJEDCH_01895	9.07e-102	mraZ	-	-	K	ko:K03925	-	ko00000	Belongs to the MraZ family
PHMJEDCH_01896	0.0	bshC	-	-	S	ko:K22136	-	ko00000	Involved in bacillithiol (BSH) biosynthesis. May catalyze the last step of the pathway, the addition of cysteine to glucosamine malate (GlcN-Mal) to generate BSH
PHMJEDCH_01897	4.86e-194	panE	1.1.1.169	-	H	ko:K00077	ko00770,ko01100,ko01110,map00770,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
PHMJEDCH_01898	2.68e-115	ylbP	-	-	K	-	-	-	n-acetyltransferase
PHMJEDCH_01899	1.65e-106	ylbO	-	-	S	ko:K06314	-	ko00000,ko03000	SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
PHMJEDCH_01900	1.71e-37	rpmF	-	-	J	ko:K02911	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Belongs to the bacterial ribosomal protein bL32 family
PHMJEDCH_01901	4.69e-115	ylbN	-	-	S	ko:K07040	-	ko00000	metal-binding, possibly nucleic acid-binding protein
PHMJEDCH_01902	1.26e-281	ylbM	-	-	S	-	-	-	Belongs to the UPF0348 family
PHMJEDCH_01903	7.74e-234	ylbL	-	-	T	ko:K07177	ko02024,map02024	ko00000,ko00001,ko01002	Belongs to the peptidase S16 family
PHMJEDCH_01904	2.03e-177	ylbK	-	-	S	ko:K07001	-	ko00000	esterase of the alpha-beta hydrolase superfamily
PHMJEDCH_01905	8.16e-268	ylbJ	-	-	S	-	-	-	Sporulation integral membrane protein YlbJ
PHMJEDCH_01906	2.38e-109	coaD	2.7.7.3	-	H	ko:K00954	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
PHMJEDCH_01907	4.27e-126	rsmD	2.1.1.171	-	L	ko:K08316	-	ko00000,ko01000,ko03009	Methyltransferase
PHMJEDCH_01908	4.62e-56	ylbG	-	-	S	-	-	-	UPF0298 protein
PHMJEDCH_01909	3.73e-94	ylbF	-	-	S	-	-	-	Belongs to the UPF0342 family
PHMJEDCH_01910	1.73e-48	ylbE	-	-	S	-	-	-	YlbE-like protein
PHMJEDCH_01911	5.5e-83	ylbD	-	-	S	-	-	-	Putative coat protein
PHMJEDCH_01912	5.8e-248	ylbC	-	-	S	-	-	-	protein with SCP PR1 domains
PHMJEDCH_01913	1.31e-93	ylbB	-	-	T	-	-	-	COG0517 FOG CBS domain
PHMJEDCH_01914	8.01e-77	ylbA	-	-	S	-	-	-	YugN-like family
PHMJEDCH_01915	1.35e-207	ctaG	-	-	S	ko:K02862	-	ko00000	cytochrome c oxidase
PHMJEDCH_01916	3.53e-69	ctaF	1.9.3.1	-	C	ko:K02277	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	COG3125 Heme copper-type cytochrome quinol oxidase, subunit 4
PHMJEDCH_01917	3.43e-141	ctaE	1.9.3.1	-	C	ko:K02276	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	COG1845 Heme copper-type cytochrome quinol oxidase, subunit 3
PHMJEDCH_01918	0.0	ctaD	1.9.3.1	-	C	ko:K02274	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
PHMJEDCH_01919	2.78e-251	ctaC	1.9.3.1	-	C	ko:K02275	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B)
PHMJEDCH_01920	2.95e-209	ctaB	2.5.1.141	-	O	ko:K02257	ko00190,ko00860,ko01100,ko01110,ko04714,map00190,map00860,map01100,map01110,map04714	ko00000,ko00001,ko00002,ko01000,ko01006,ko03029	Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group
PHMJEDCH_01921	3.88e-211	ctaA	-	-	O	ko:K02259	ko00190,ko00860,ko01100,ko01110,ko02020,ko04714,map00190,map00860,map01100,map01110,map02020,map04714	ko00000,ko00001,ko00002,ko03029	Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group
PHMJEDCH_01922	0.0	pyc	6.4.1.1	-	C	ko:K01958	ko00020,ko00620,ko00720,ko01100,ko01120,ko01200,ko01230,map00020,map00620,map00720,map01100,map01120,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
PHMJEDCH_01923	3.73e-266	ftsW	-	-	D	ko:K03588	ko04112,map04112	ko00000,ko00001,ko02000,ko03036	Belongs to the SEDS family
PHMJEDCH_01924	1.99e-58	ylaN	-	-	S	-	-	-	Belongs to the UPF0358 family
PHMJEDCH_01925	1.94e-216	glsA	3.5.1.2	-	E	ko:K01425	ko00220,ko00250,ko00471,ko01100,ko04724,ko04727,ko04964,ko05206,ko05230,map00220,map00250,map00471,map01100,map04724,map04727,map04964,map05206,map05230	ko00000,ko00001,ko01000	Belongs to the glutaminase family
PHMJEDCH_01926	7.69e-105	ylaL	-	-	S	-	-	-	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
PHMJEDCH_01927	4.29e-310	ylaK	-	-	T	ko:K07175	-	ko00000	ATPase related to phosphate starvation-inducible protein PhoH
PHMJEDCH_01928	1.88e-129	ylaJ	-	-	S	-	-	-	Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ)
PHMJEDCH_01929	7.95e-45	ylaI	-	-	S	-	-	-	protein conserved in bacteria
PHMJEDCH_01930	1.41e-64	-	-	-	S	-	-	-	YlaH-like protein
PHMJEDCH_01931	0.0	typA	-	-	T	ko:K06207	-	ko00000	GTP-binding protein TypA
PHMJEDCH_01932	5.62e-33	-	-	-	S	-	-	-	Family of unknown function (DUF5325)
PHMJEDCH_01933	1.62e-56	ylaE	-	-	-	-	-	-	-
PHMJEDCH_01935	9.3e-32	ylaA	-	-	-	-	-	-	-
PHMJEDCH_01936	0.0	mpl	3.4.24.28, 3.4.24.29	-	E	ko:K01400,ko:K01401,ko:K19351	ko01503,ko05150,map01503,map05150	ko00000,ko00001,ko01000,ko01002	Peptidase M4
PHMJEDCH_01937	1.08e-92	ykzC	-	-	S	-	-	-	Acetyltransferase (GNAT) family
PHMJEDCH_01938	1.57e-193	suhB	3.1.3.25	-	G	ko:K01092	ko00521,ko00562,ko01100,ko04070,map00521,map00562,map01100,map04070	ko00000,ko00001,ko00002,ko01000	Inositol monophosphatase
PHMJEDCH_01939	7.89e-32	ykzI	-	-	-	-	-	-	-
PHMJEDCH_01940	3.32e-154	yktB	-	-	S	-	-	-	Belongs to the UPF0637 family
PHMJEDCH_01941	5.44e-56	yktA	-	-	S	-	-	-	Belongs to the UPF0223 family
PHMJEDCH_01942	0.0	speA	4.1.1.17, 4.1.1.19	-	E	ko:K01581,ko:K01585	ko00330,ko00480,ko01100,ko01110,ko01130,map00330,map00480,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Arginine
PHMJEDCH_01943	3.33e-173	pdaA_2	3.5.1.104	-	G	ko:K01567,ko:K22278	-	ko00000,ko01000	Polysaccharide deacetylase
PHMJEDCH_01944	6.84e-60	slp	-	-	CO	-	-	-	COG0526, thiol-disulfide isomerase and thioredoxins
PHMJEDCH_01945	0.0	pdhD	1.8.1.4	-	C	ko:K00382	ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000,ko04147	COG1249 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes
PHMJEDCH_01946	6.09e-294	pdhC	2.3.1.12	-	C	ko:K00627	ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
PHMJEDCH_01947	5.84e-226	pdhB	1.2.4.1	-	C	ko:K00162	ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04922,ko05230,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200,map04066,map04922,map05230	br01601,ko00000,ko00001,ko00002,ko01000	COG0022 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit
PHMJEDCH_01948	1.04e-249	pdhA	1.2.4.1	-	C	ko:K00161	ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04922,ko05230,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200,map04066,map04922,map05230	br01601,ko00000,ko00001,ko00002,ko01000	COG1071 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit
PHMJEDCH_01949	9.3e-84	ykyA	-	-	L	-	-	-	Putative cell-wall binding lipoprotein
PHMJEDCH_01950	4.93e-05	-	-	-	S	-	-	-	Protein of unknown function (Tiny_TM_bacill)
PHMJEDCH_01951	1.49e-126	def	3.5.1.88	-	J	ko:K01462	-	ko00000,ko01000	Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
PHMJEDCH_01952	8.85e-174	ykrA	-	-	S	-	-	-	hydrolases of the HAD superfamily
PHMJEDCH_01953	7.4e-41	ykzG	-	-	S	-	-	-	Belongs to the UPF0356 family
PHMJEDCH_01954	0.0	rnjA	-	-	S	ko:K12574	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PHMJEDCH_01955	0.0	ade	3.5.4.2	-	F	ko:K01486	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
PHMJEDCH_01956	9.71e-148	ktrA	-	-	P	ko:K03499	-	ko00000,ko02000	COG0569 K transport systems, NAD-binding component
PHMJEDCH_01957	3.99e-192	ykqA	-	-	P	-	-	-	Gamma-glutamyl cyclotransferase, AIG2-like
PHMJEDCH_01958	9.16e-301	kinC	2.7.13.3	-	T	ko:K07698	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	COG0642 Signal transduction histidine kinase
PHMJEDCH_01959	7.46e-59	abrB	-	-	K	ko:K06284	-	ko00000,ko03000	of stationary sporulation gene expression
PHMJEDCH_01960	6.17e-234	mreBH	-	-	D	ko:K03569	-	ko00000,ko02048,ko03036,ko04812	Rod-share determining protein MreBH
PHMJEDCH_01961	7.7e-19	-	-	-	S	-	-	-	Uncharacterized protein YkpC
PHMJEDCH_01962	1.63e-300	pepS	-	-	E	ko:K19689	-	ko00000,ko01000,ko01002	COG2309 Leucyl aminopeptidase (aminopeptidase T)
PHMJEDCH_01963	4.63e-200	panE1	1.1.1.169	-	H	ko:K00077	ko00770,ko01100,ko01110,map00770,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
PHMJEDCH_01964	0.0	ykpA	-	-	S	-	-	-	COG0488 ATPase components of ABC transporters with duplicated ATPase domains
PHMJEDCH_01965	3.54e-48	ykoA	-	-	-	-	-	-	-
PHMJEDCH_01966	3.77e-138	sipT	3.4.21.89	-	U	ko:K03100	ko02024,ko03060,map02024,map03060	ko00000,ko00001,ko01000,ko01002	Belongs to the peptidase S26 family
PHMJEDCH_01967	0.0	fruA	2.7.1.202	-	GT	ko:K02768,ko:K02769,ko:K02770	ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	COG1762 Phosphotransferase system mannitol fructose-specific IIA domain (Ntr-type)
PHMJEDCH_01968	8.8e-210	pfkB	2.7.1.56	-	G	ko:K00882	ko00051,map00051	ko00000,ko00001,ko01000	Belongs to the carbohydrate kinase PfkB family
PHMJEDCH_01969	8.9e-168	fruR	-	-	K	ko:K03436	-	ko00000,ko03000	Transcriptional regulator
PHMJEDCH_01970	4.52e-264	yknZ	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter (permease)
PHMJEDCH_01971	3.39e-157	yknY	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PHMJEDCH_01972	7e-224	yknX	-	-	M	ko:K02005,ko:K13888	-	ko00000,ko00002,ko02000	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PHMJEDCH_01973	5.77e-134	yknW	-	-	S	-	-	-	Yip1 domain
PHMJEDCH_01974	4.7e-43	moaD	-	-	H	ko:K03636	ko04122,map04122	ko00000,ko00001	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
PHMJEDCH_01975	3.41e-107	moaE	2.8.1.12	-	H	ko:K03635	ko00790,ko01100,ko04122,map00790,map01100,map04122	ko00000,ko00001,ko01000	COG0314 Molybdopterin converting factor, large subunit
PHMJEDCH_01976	3.06e-111	mobB	-	-	H	ko:K03753	-	ko00000	molybdopterin-guanine dinucleotide biosynthesis protein
PHMJEDCH_01977	7.3e-305	moeA	2.10.1.1	-	H	ko:K03750	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko01000	molybdopterin
PHMJEDCH_01978	1.45e-233	moeB	2.7.7.73, 2.7.7.80	-	H	ko:K03148,ko:K21029	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000	COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2
PHMJEDCH_01979	3.85e-130	mobA	2.7.7.77	-	H	ko:K03752	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko01000	Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor
PHMJEDCH_01980	8.39e-201	yknT	-	-	-	ko:K06437	-	ko00000	-
PHMJEDCH_01981	3.55e-125	rok	-	-	K	-	-	-	Repressor of ComK
PHMJEDCH_01983	1.9e-93	ykuV	-	-	CO	-	-	-	thiol-disulfide
PHMJEDCH_01985	5.77e-177	ykuT	-	-	M	ko:K22044	-	ko00000,ko02000	Mechanosensitive ion channel
PHMJEDCH_01986	1.25e-51	ykuS	-	-	S	-	-	-	Belongs to the UPF0180 family
PHMJEDCH_01987	8.58e-271	hipO	3.5.1.47	-	E	ko:K05823	ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000,ko01002	Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
PHMJEDCH_01988	4.79e-128	dapH	2.3.1.117, 2.3.1.89	-	E	ko:K00674,ko:K05822	ko00300,ko01100,ko01110,ko01120,ko01230,map00300,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
PHMJEDCH_01989	2.61e-95	fld	-	-	C	ko:K03839	-	ko00000	Flavodoxin
PHMJEDCH_01990	1.07e-207	ykuO	-	-	-	-	-	-	-
PHMJEDCH_01991	2.92e-113	ykuN	-	-	C	ko:K03839	-	ko00000	Flavodoxin
PHMJEDCH_01992	1.08e-214	ccpC	-	-	K	-	-	-	Transcriptional regulator
PHMJEDCH_01993	8.55e-99	ykuL	-	-	S	-	-	-	CBS domain
PHMJEDCH_01994	2.63e-36	ykzF	-	-	S	-	-	-	Antirepressor AbbA
PHMJEDCH_01995	6.94e-117	ykuK	-	-	S	ko:K09776	-	ko00000	Ribonuclease H-like
PHMJEDCH_01996	2.11e-49	ykuJ	-	-	S	-	-	-	protein conserved in bacteria
PHMJEDCH_01997	1.74e-293	ykuI	-	-	T	-	-	-	Diguanylate phosphodiesterase
PHMJEDCH_01999	1.33e-175	fadH	1.3.1.34	-	IQ	ko:K00219	-	ko00000,ko01000	COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PHMJEDCH_02000	7.29e-188	ykuE	-	-	S	ko:K07098	-	ko00000	Metallophosphoesterase
PHMJEDCH_02001	3.48e-114	ykuD	-	-	S	-	-	-	protein conserved in bacteria
PHMJEDCH_02002	2e-302	ykuC	-	-	EGP	-	-	-	COG0477 Permeases of the major facilitator superfamily
PHMJEDCH_02003	1.45e-107	ykyB	-	-	S	-	-	-	YkyB-like protein
PHMJEDCH_02004	1.3e-211	cheV	-	-	T	ko:K03408,ko:K03415	ko02020,ko02030,map02020,map02030	ko00000,ko00001,ko00002,ko02022,ko02035	Chemotaxis protein CheV
PHMJEDCH_02005	2.22e-15	-	-	-	-	-	-	-	-
PHMJEDCH_02006	5.43e-274	patA	-	-	E	ko:K00841	ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase
PHMJEDCH_02007	0.0	kinA	2.7.13.3	-	T	ko:K02491	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
PHMJEDCH_02008	0.0	pbp2b	-	-	M	ko:K00687,ko:K12553,ko:K21465,ko:K21466	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01011	Penicillin-binding Protein
PHMJEDCH_02009	1.7e-167	ykwD	-	-	J	-	-	-	protein with SCP PR1 domains
PHMJEDCH_02010	9.19e-65	-	-	-	-	-	-	-	-
PHMJEDCH_02011	5.71e-203	glxR	1.1.1.31	-	I	ko:K00020	ko00280,ko01100,map00280,map01100	ko00000,ko00001,ko01000	COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases
PHMJEDCH_02012	0.0	mcpC	-	-	NT	ko:K03406	ko02020,ko02030,map02020,map02030	ko00000,ko00001,ko02035	chemotaxis protein
PHMJEDCH_02013	2.29e-252	splB	4.1.99.14	-	L	ko:K03716	-	ko00000,ko01000	Spore photoproduct lyase
PHMJEDCH_02014	1.22e-48	splA	-	-	S	ko:K06315	-	ko00000,ko03000	Transcriptional regulator
PHMJEDCH_02015	0.0	ptsI	2.7.3.9	-	G	ko:K08483	ko02060,map02060	ko00000,ko00001,ko01000,ko02000	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
PHMJEDCH_02016	1.51e-53	ptsH	-	-	G	ko:K11189	-	ko00000,ko02000	phosphocarrier protein HPr
PHMJEDCH_02017	0.0	ptsG	2.7.1.199	-	G	ko:K20116,ko:K20117,ko:K20118	ko00010,ko00520,ko02060,map00010,map00520,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
PHMJEDCH_02018	1.54e-196	glcT	-	-	K	ko:K03480,ko:K03488	-	ko00000,ko03000	antiterminator
PHMJEDCH_02019	4.21e-217	ykvZ	-	-	K	-	-	-	Transcriptional regulator
PHMJEDCH_02021	5.05e-258	ykvY	3.4.13.9	-	E	ko:K01271	-	ko00000,ko01000,ko01002	COG0006 Xaa-Pro aminopeptidase
PHMJEDCH_02022	0.0	zosA	3.6.3.3, 3.6.3.5	-	P	ko:K01534	-	ko00000,ko01000	COG2217 Cation transport ATPase
PHMJEDCH_02023	6.24e-107	stoA	-	-	CO	-	-	-	thiol-disulfide
PHMJEDCH_02024	1.16e-300	ykvU	-	-	S	-	-	-	COG2244 Membrane protein involved in the export of O-antigen and teichoic acid
PHMJEDCH_02025	5.23e-136	ykvT	3.5.1.28	-	M	ko:K01449	-	ko00000,ko01000	Cell Wall Hydrolase
PHMJEDCH_02026	8.76e-38	-	-	-	-	-	-	-	-
PHMJEDCH_02027	1.56e-34	ykvS	-	-	S	-	-	-	protein conserved in bacteria
PHMJEDCH_02028	6.76e-56	ykvR	-	-	S	-	-	-	Protein of unknown function (DUF3219)
PHMJEDCH_02029	2.56e-124	queF	1.7.1.13	-	S	ko:K09457	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko01000,ko03016	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
PHMJEDCH_02030	1.98e-176	queE	4.3.99.3	-	H	ko:K10026	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko01000,ko03016	Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds
PHMJEDCH_02031	2.55e-102	queD	4.1.2.50, 4.2.3.12	-	H	ko:K01737	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000,ko03016	synthase
PHMJEDCH_02032	2.72e-162	queC	6.3.4.20	-	F	ko:K06920	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko01000,ko03016	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
PHMJEDCH_02033	1.81e-196	-	-	-	-	-	-	-	-
PHMJEDCH_02035	6.18e-222	ykvI	-	-	S	-	-	-	membrane
PHMJEDCH_02036	0.0	clpE	-	-	O	ko:K03697,ko:K04086	-	ko00000,ko03110	Belongs to the ClpA ClpB family
PHMJEDCH_02037	2.96e-176	motA	-	-	N	ko:K02556	ko02020,ko02030,ko02040,map02020,map02030,map02040	ko00000,ko00001,ko02000,ko02035	flagellar motor
PHMJEDCH_02038	1.14e-160	motB	-	-	N	ko:K02557	ko02030,ko02040,map02030,map02040	ko00000,ko00001,ko02000,ko02035	Flagellar motor protein
PHMJEDCH_02039	3.34e-101	ykvE	-	-	K	ko:K15973	-	ko00000,ko03000	transcriptional
PHMJEDCH_02040	0.0	kinD	2.7.13.3	-	T	ko:K13532	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	COG0642 Signal transduction histidine kinase
PHMJEDCH_02042	7.7e-117	mtnD	1.13.11.53, 1.13.11.54	-	S	ko:K08967	ko00270,ko01100,map00270,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway
PHMJEDCH_02043	1.15e-140	mtnB	4.2.1.109	-	E	ko:K08964	ko00270,ko01100,map00270,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the dehydration of methylthioribulose-1- phosphate (MTRu-1-P) into 2,3-diketo-5-methylthiopentyl-1- phosphate (DK-MTP-1-P)
PHMJEDCH_02044	1.45e-169	mtnX	3.1.3.87	-	E	ko:K08966	ko00270,ko01100,map00270,map01100	ko00000,ko00001,ko00002,ko01000	Dephosphorylates 2-hydroxy-3-keto-5-methylthiopentenyl- 1-phosphate (HK-MTPenyl-1-P) yielding 1,2-dihydroxy-3-keto-5- methylthiopentene (DHK-MTPene)
PHMJEDCH_02045	4.16e-284	mtnW	5.3.2.5	-	G	ko:K08965	ko00270,ko01100,map00270,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the enolization of 2,3-diketo-5- methylthiopentyl-1-phosphate (DK-MTP-1-P) into 2-hydroxy-3-keto-5- methylthiopentenyl-1-phosphate (HK-MTPenyl-1-P)
PHMJEDCH_02046	1.77e-282	mtnE	-	-	E	ko:K08969,ko:K19549	ko00270,ko01100,ko01130,map00270,map01100,map01130	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase
PHMJEDCH_02047	1.03e-175	mtnU	3.5.1.3	-	S	ko:K13566	ko00250,map00250	ko00000,ko00001,ko01000	Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase
PHMJEDCH_02048	9.79e-278	mtnK	2.7.1.100	-	F	ko:K00899	ko00270,ko01100,map00270,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate
PHMJEDCH_02049	1.59e-244	mtnA	5.3.1.23	-	E	ko:K08963	ko00270,ko01100,map00270,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
PHMJEDCH_02051	9.18e-105	ogt	2.1.1.63	-	L	ko:K00567,ko:K13531	-	ko00000,ko01000,ko03400	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
PHMJEDCH_02052	0.0	kinE	2.7.13.3	-	T	ko:K13533	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
PHMJEDCH_02053	1.59e-242	ykrP	-	-	G	-	-	-	COG3594 Fucose 4-O-acetylase and related acetyltransferases
PHMJEDCH_02054	1.37e-26	ykzE	-	-	-	-	-	-	-
PHMJEDCH_02055	2.76e-144	-	-	-	S	-	-	-	Protein of unknown function (DUF421)
PHMJEDCH_02056	7.83e-301	ktrD	-	-	P	-	-	-	COG0168 Trk-type K transport systems, membrane components
PHMJEDCH_02057	1.74e-197	htpX	-	-	O	ko:K03799	-	ko00000,ko00002,ko01000,ko01002	Belongs to the peptidase M48B family
PHMJEDCH_02058	1.55e-159	ykrK	-	-	S	-	-	-	Domain of unknown function (DUF1836)
PHMJEDCH_02059	3.31e-35	sspD	-	-	S	ko:K06421	-	ko00000	small acid-soluble spore protein
PHMJEDCH_02060	3.51e-221	ykrI	-	-	S	-	-	-	Anti-sigma factor N-terminus
PHMJEDCH_02061	6.02e-163	sigI	-	-	K	ko:K03093	-	ko00000,ko03021	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
PHMJEDCH_02062	5.75e-164	ykoY	-	-	P	-	-	-	COG0861 Membrane protein TerC, possibly involved in tellurium resistance
PHMJEDCH_02063	1.21e-123	ykoX	-	-	S	-	-	-	membrane-associated protein
PHMJEDCH_02064	0.0	ykoW	2.7.7.65	-	T	ko:K21023	ko02025,map02025	ko00000,ko00001,ko01000	Diguanylate cyclase
PHMJEDCH_02065	1.82e-197	ku	-	-	L	ko:K10979	ko03450,map03450	ko00000,ko00001,ko03400	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
PHMJEDCH_02066	0.0	ligD	6.5.1.1	-	L	ko:K01971	ko03450,map03450	ko00000,ko00001,ko01000,ko03400	ATP-dependent DNA ligase
PHMJEDCH_02067	2.57e-127	ykoP	-	-	G	-	-	-	polysaccharide deacetylase
PHMJEDCH_02068	3.16e-104	ykoM	-	-	K	ko:K15973	-	ko00000,ko03000	transcriptional
PHMJEDCH_02069	3.57e-35	ykoL	-	-	-	-	-	-	-
PHMJEDCH_02070	2.24e-23	-	-	-	-	-	-	-	-
PHMJEDCH_02071	3.53e-69	tnrA	-	-	K	-	-	-	transcriptional
PHMJEDCH_02072	7.93e-306	mgtE	-	-	P	ko:K06213	-	ko00000,ko02000	Acts as a magnesium transporter
PHMJEDCH_02074	4.54e-303	ydhD	-	-	M	-	-	-	Glycosyl hydrolase
PHMJEDCH_02075	3.67e-123	ykoE	-	-	S	ko:K16925	-	ko00000,ko00002,ko02000	ABC-type cobalt transport system, permease component
PHMJEDCH_02076	0.0	ykoD	-	-	P	ko:K16786,ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
PHMJEDCH_02077	7.49e-161	ykoC	-	-	P	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Cobalt transport protein
PHMJEDCH_02078	4.2e-179	yojH	-	-	T	ko:K17763	-	ko00000,ko03021	COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)
PHMJEDCH_02079	2.76e-221	isp	-	-	O	ko:K13275	-	ko00000,ko01000,ko01002,ko03110	Belongs to the peptidase S8 family
PHMJEDCH_02080	0.0	metE	2.1.1.14	-	E	ko:K00549	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
PHMJEDCH_02081	7.17e-152	nsr	-	-	T	-	-	-	COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
PHMJEDCH_02082	2.59e-258	-	-	-	EGP	ko:K05820	-	ko00000,ko02000	COG0477 Permeases of the major facilitator superfamily
PHMJEDCH_02083	8.96e-151	-	-	-	K	-	-	-	Collagen triple helix repeat
PHMJEDCH_02084	2.15e-260	-	-	-	M	-	-	-	Glycosyl transferase family 2
PHMJEDCH_02086	1.46e-70	-	-	-	D	-	-	-	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
PHMJEDCH_02087	1.3e-90	ohrB	-	-	O	-	-	-	Organic hydroperoxide resistance protein
PHMJEDCH_02088	6.88e-102	ohrR	-	-	K	-	-	-	COG1846 Transcriptional regulators
PHMJEDCH_02089	1.89e-90	ohrA	-	-	O	-	-	-	Organic hydroperoxide resistance protein
PHMJEDCH_02090	1.35e-281	proA	1.2.1.41	-	E	ko:K00147	ko00330,ko00332,ko01100,ko01110,ko01130,ko01230,map00330,map00332,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
PHMJEDCH_02091	3.28e-257	proB	2.7.2.11	-	E	ko:K00931	ko00330,ko00332,ko01100,ko01130,ko01230,map00330,map00332,map01100,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
PHMJEDCH_02092	1.03e-211	purU	3.5.1.10	-	F	ko:K01433	ko00630,ko00670,map00630,map00670	ko00000,ko00001,ko01000	Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4)
PHMJEDCH_02093	2.46e-64	ykkD	-	-	P	ko:K18925	-	ko00000,ko00002,ko02000	Multidrug resistance protein
PHMJEDCH_02094	8.24e-64	ykkC	-	-	P	ko:K18924	-	ko00000,ko00002,ko02000	Multidrug resistance protein
PHMJEDCH_02095	1.01e-118	ykkB	-	-	J	-	-	-	COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins
PHMJEDCH_02096	2.16e-120	ykhA	-	-	I	-	-	-	Acyl-CoA hydrolase
PHMJEDCH_02097	1.45e-179	ykgA	-	-	E	-	-	-	Amidinotransferase
PHMJEDCH_02098	6.11e-256	pgl	3.1.1.31	-	G	ko:K07404	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	6-phosphogluconolactonase
PHMJEDCH_02099	1.49e-227	ykfD	-	-	E	ko:K02032,ko:K10823	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
PHMJEDCH_02100	1.74e-198	ykfC	3.4.14.13	-	M	ko:K20742	-	ko00000,ko01000,ko01002	COG0791 Cell wall-associated hydrolases (invasion-associated proteins)
PHMJEDCH_02101	2e-244	ykfB	5.1.1.20	-	M	ko:K19802	-	ko00000,ko01000	Belongs to the mandelate racemase muconate lactonizing enzyme family
PHMJEDCH_02102	8.59e-221	ykfA	3.4.17.13	-	V	ko:K01297	-	ko00000,ko01000,ko01002,ko01011	proteins, homologs of microcin C7 resistance protein MccF
PHMJEDCH_02103	0.0	dppE	-	-	E	ko:K16199	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
PHMJEDCH_02104	2.02e-32	dppE	-	-	E	ko:K16199	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
PHMJEDCH_02105	1.49e-230	dppD	-	-	P	ko:K02031,ko:K15583,ko:K16202	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
PHMJEDCH_02106	3.22e-218	dppC	-	-	EP	ko:K15582,ko:K16201	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	COG1173 ABC-type dipeptide oligopeptide nickel transport systems, permease components
PHMJEDCH_02107	2.68e-202	dppB	-	-	P	ko:K16200	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG0601 ABC-type dipeptide oligopeptide nickel transport systems, permease components
PHMJEDCH_02108	4.18e-198	dppA	-	-	E	ko:K16203	-	ko00000,ko01000,ko01002	D-aminopeptidase
PHMJEDCH_02109	0.0	yubD	-	-	P	-	-	-	Major Facilitator Superfamily
PHMJEDCH_02110	2.08e-266	htrA	3.4.21.107	-	O	ko:K04771	ko01503,ko02020,map01503,map02020	ko00000,ko00001,ko00002,ko01000,ko01002,ko03110	COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
PHMJEDCH_02112	3.02e-227	ykcC	-	GT2	M	ko:K20534	-	ko00000,ko01000,ko01005,ko02000	COG0463 Glycosyltransferases involved in cell wall biogenesis
PHMJEDCH_02113	0.0	ykcB	-	-	M	-	-	-	COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
PHMJEDCH_02114	1.75e-227	ykcA	-	-	E	ko:K15975	-	ko00000	COG0346 Lactoylglutathione lyase and related lyases
PHMJEDCH_02115	2.11e-308	steT	-	-	E	ko:K03294	-	ko00000	amino acid
PHMJEDCH_02116	1.85e-144	ykaA	-	-	P	ko:K07220	-	ko00000	COG1392 Phosphate transport regulator (distant homolog of PhoU)
PHMJEDCH_02117	2.36e-224	pit	-	-	P	ko:K03306	-	ko00000	phosphate transporter
PHMJEDCH_02118	1.05e-169	spoIISA	-	-	S	ko:K06388	-	ko00000	Toxin SpoIISA, type II toxin-antitoxin system
PHMJEDCH_02119	2.53e-31	spoIISB	-	-	S	ko:K06389	-	ko00000	Stage II sporulation protein SB
PHMJEDCH_02120	4.2e-207	xlyA	3.5.1.28	-	M	ko:K01447	-	ko00000,ko01000	n-acetylmuramoyl-L-alanine amidase
PHMJEDCH_02121	5.3e-49	xhlB	-	-	S	-	-	-	SPP1 phage holin
PHMJEDCH_02122	6.44e-50	xhlA	-	-	S	-	-	-	Haemolysin XhlA
PHMJEDCH_02123	2.64e-134	xepA	-	-	-	-	-	-	-
PHMJEDCH_02124	2.74e-23	xkdX	-	-	-	-	-	-	-
PHMJEDCH_02125	6.09e-58	xkdW	-	-	S	-	-	-	XkdW protein
PHMJEDCH_02126	2.06e-224	-	-	-	-	-	-	-	-
PHMJEDCH_02127	1.48e-36	-	-	-	-	-	-	-	-
PHMJEDCH_02128	2.37e-111	-	-	-	S	-	-	-	Uncharacterised protein conserved in bacteria (DUF2313)
PHMJEDCH_02129	4.18e-210	-	-	-	S	-	-	-	Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology
PHMJEDCH_02130	1.65e-75	xkdS	-	-	S	-	-	-	Protein of unknown function (DUF2634)
PHMJEDCH_02131	3.05e-44	xkdR	-	-	S	-	-	-	Protein of unknown function (DUF2577)
PHMJEDCH_02132	2.78e-208	xkdQ	-	-	G	-	-	-	NLP P60 protein
PHMJEDCH_02133	1.88e-144	xkdP	-	-	S	-	-	-	Lysin motif
PHMJEDCH_02134	2.29e-246	xkdO	-	-	L	-	-	-	Transglycosylase SLT domain
PHMJEDCH_02135	4.33e-27	-	-	-	-	-	-	-	-
PHMJEDCH_02136	7.28e-96	-	-	-	S	-	-	-	Phage XkdN-like tail assembly chaperone protein, TAC
PHMJEDCH_02137	8.21e-97	xkdM	-	-	S	-	-	-	Phage tail tube protein
PHMJEDCH_02138	4.44e-285	xkdK	-	-	S	-	-	-	Phage tail sheath C-terminal domain
PHMJEDCH_02139	3.86e-21	-	-	-	-	-	-	-	-
PHMJEDCH_02140	1.82e-75	xkdJ	-	-	-	-	-	-	-
PHMJEDCH_02141	2.41e-77	xkdI	-	-	S	-	-	-	Bacteriophage HK97-gp10, putative tail-component
PHMJEDCH_02143	8.84e-61	yqbG	-	-	S	-	-	-	Protein of unknown function (DUF3199)
PHMJEDCH_02144	3.38e-202	xkdG	-	-	S	-	-	-	Phage capsid family
PHMJEDCH_02145	8.47e-119	xkdF3	-	-	L	-	-	-	Putative phage serine protease XkdF
PHMJEDCH_02146	1.72e-302	xkdE3	-	-	S	-	-	-	portal protein
PHMJEDCH_02147	3.35e-263	xtmB	-	-	S	ko:K06909	-	ko00000	phage terminase, large subunit
PHMJEDCH_02148	5.94e-136	xtmA	-	-	L	ko:K07474	-	ko00000	phage terminase small subunit
PHMJEDCH_02149	3.15e-105	xpf	-	-	K	ko:K03088	-	ko00000,ko03021	COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
PHMJEDCH_02153	5.86e-185	xkdC	-	-	L	-	-	-	Bacterial dnaA protein
PHMJEDCH_02155	1.27e-72	xre	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
PHMJEDCH_02156	2.86e-139	xkdA	-	-	E	-	-	-	IrrE N-terminal-like domain
PHMJEDCH_02157	2.69e-128	yjqB	-	-	S	-	-	-	phage-related replication protein
PHMJEDCH_02158	3.19e-79	yjqA	-	-	S	-	-	-	Bacterial PH domain
PHMJEDCH_02159	5.72e-213	xlyB	3.5.1.28	-	M	ko:K01447	-	ko00000,ko01000	N-acetylmuramoyl-L-alanine amidase
PHMJEDCH_02161	3.13e-274	rapA	-	-	S	ko:K06359,ko:K06360,ko:K06367	ko02024,map02024	ko00000,ko00001,ko01000	Response regulator aspartate phosphatase
PHMJEDCH_02162	9.4e-100	yjoA	-	-	S	-	-	-	DinB family
PHMJEDCH_02163	2.95e-163	yjnA	-	-	S	ko:K07090	-	ko00000	membrane transporter protein
PHMJEDCH_02165	1.84e-166	-	-	-	T	-	-	-	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PHMJEDCH_02166	1.29e-112	-	-	-	T	-	-	-	Transcriptional regulatory protein, C terminal
PHMJEDCH_02167	3.18e-203	uxaA	4.2.1.7	-	G	ko:K01685	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko00002,ko01000	Altronate
PHMJEDCH_02168	4.65e-231	exuR	-	-	K	ko:K02529	-	ko00000,ko03000	transcriptional
PHMJEDCH_02169	1.75e-98	uxaC	5.3.1.12	-	G	ko:K01812	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko00002,ko01000	glucuronate isomerase
PHMJEDCH_02170	8.37e-278	yjlD	1.6.99.3	-	C	ko:K03885	ko00190,map00190	ko00000,ko00001,ko01000	NADH dehydrogenase
PHMJEDCH_02171	1.7e-87	yjlC	-	-	S	-	-	-	Protein of unknown function (DUF1641)
PHMJEDCH_02172	1.47e-110	yjlB	-	-	S	-	-	-	Cupin domain
PHMJEDCH_02173	5.99e-220	yjlA	-	-	EG	-	-	-	Putative multidrug resistance efflux transporter
PHMJEDCH_02174	2.23e-159	yjkB	-	-	P	ko:K02068	-	ko00000,ko00002,ko02000	Belongs to the ABC transporter superfamily
PHMJEDCH_02175	3.47e-150	ybbM	-	-	S	ko:K02069	-	ko00000,ko00002,ko02000	transport system, permease component
PHMJEDCH_02176	1.44e-180	hemD	4.2.1.75	-	H	ko:K01719	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	ko00000,ko00001,ko00002,ko01000	Uroporphyrinogen-III synthase
PHMJEDCH_02177	1.73e-40	-	-	-	-	-	-	-	-
PHMJEDCH_02178	3.96e-275	yjiC	-	-	CG	-	-	-	COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase
PHMJEDCH_02179	7.68e-274	yjiB	1.14.14.46	-	C	ko:K15468,ko:K16593	ko00780,ko01100,map00780,map01100	ko00000,ko00001,ko00002,ko00199,ko01000,ko01008	Cytochrome P450
PHMJEDCH_02180	5.56e-111	yjgD	-	-	S	-	-	-	Protein of unknown function (DUF1641)
PHMJEDCH_02181	0.0	-	1.17.1.9	-	C	ko:K00123	ko00630,ko00680,ko01100,ko01120,ko01200,map00630,map00680,map01100,map01120,map01200	ko00000,ko00001,ko01000	formate dehydrogenase, alpha subunit
PHMJEDCH_02182	4.05e-122	yjgB	-	-	S	-	-	-	Domain of unknown function (DUF4309)
PHMJEDCH_02183	6.25e-83	yjgA	-	-	T	-	-	-	Protein of unknown function (DUF2809)
PHMJEDCH_02184	1.07e-28	yjfB	-	-	S	-	-	-	Putative motility protein
PHMJEDCH_02186	2.77e-133	-	-	-	S	ko:K07507	-	ko00000,ko02000	MgtC SapB transporter
PHMJEDCH_02187	4.16e-69	-	-	-	K	-	-	-	helix_turn_helix multiple antibiotic resistance protein
PHMJEDCH_02188	3.81e-45	-	-	-	-	-	-	-	-
PHMJEDCH_02189	1.67e-151	-	-	-	S	-	-	-	Haloacid dehalogenase-like hydrolase
PHMJEDCH_02190	1.39e-177	yulB	-	-	K	ko:K02530	-	ko00000,ko03000	COG1349 Transcriptional regulators of sugar metabolism
PHMJEDCH_02191	0.0	lacG	3.2.1.21, 3.2.1.85, 3.2.1.86	GT1	G	ko:K01220,ko:K01223,ko:K05350	ko00010,ko00052,ko00460,ko00500,ko00940,ko01100,ko01110,map00010,map00052,map00460,map00500,map00940,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
PHMJEDCH_02192	3.63e-66	celC	2.7.1.196, 2.7.1.205, 2.7.1.207	-	G	ko:K02759,ko:K02786	ko00052,ko00500,ko01100,ko02060,map00052,map00500,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
PHMJEDCH_02193	0.0	lacE	2.7.1.207	-	G	ko:K02761,ko:K02787,ko:K02788	ko00052,ko00500,ko01100,ko02060,map00052,map00500,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PHMJEDCH_02194	7.71e-277	yvfO	3.2.1.89	-	G	ko:K01224	-	ko00000,ko01000	arabinogalactan
PHMJEDCH_02195	1.09e-99	-	-	-	K	-	-	-	helix_turn_helix multiple antibiotic resistance protein
PHMJEDCH_02196	1.35e-302	yfjF	-	-	EGP	-	-	-	Belongs to the major facilitator superfamily
PHMJEDCH_02197	5.19e-60	yjcS	-	-	S	-	-	-	Antibiotic biosynthesis monooxygenase
PHMJEDCH_02198	1.32e-196	penP	3.5.2.6	-	V	ko:K17836,ko:K18766	ko00311,ko01130,ko01501,map00311,map01130,map01501	ko00000,ko00001,ko00002,ko01000,ko01504	beta-lactamase
PHMJEDCH_02200	6.15e-32	-	-	-	N	-	-	-	Kelch motif
PHMJEDCH_02204	4.74e-38	-	-	-	S	-	-	-	Bacillus cereus group antimicrobial protein
PHMJEDCH_02205	2.46e-57	dinB2	2.7.7.7	-	L	ko:K02346,ko:K03502	-	ko00000,ko01000,ko03400	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
PHMJEDCH_02206	9.18e-49	-	-	-	S	-	-	-	YolD-like protein
PHMJEDCH_02207	0.0	-	-	-	K	-	-	-	Psort location Cytoplasmic, score
PHMJEDCH_02208	7.99e-240	-	-	-	K	-	-	-	Psort location Cytoplasmic, score
PHMJEDCH_02210	9.5e-81	-	-	-	H	-	-	-	Acetyltransferase (GNAT) domain
PHMJEDCH_02211	2.21e-28	yokK	-	-	S	-	-	-	SMI1 / KNR4 family
PHMJEDCH_02212	1.61e-128	-	1.1.1.169	-	H	ko:K00077	ko00770,ko01100,ko01110,map00770,map01100,map01110	ko00000,ko00001,ko00002,ko01000	2-dehydropantoate 2-reductase
PHMJEDCH_02213	1.86e-116	yokH	-	-	G	-	-	-	SMI1 / KNR4 family
PHMJEDCH_02214	1.06e-42	-	-	-	-	-	-	-	-
PHMJEDCH_02215	2.31e-90	-	-	-	S	-	-	-	Bacterial EndoU nuclease
PHMJEDCH_02216	2.89e-73	-	-	-	-	-	-	-	-
PHMJEDCH_02220	1.63e-241	-	-	-	M	-	-	-	nucleic acid phosphodiester bond hydrolysis
PHMJEDCH_02221	8.37e-39	-	-	-	S	-	-	-	SMI1-KNR4 cell-wall
PHMJEDCH_02222	6.76e-29	-	-	-	K	-	-	-	Helix-turn-helix domain
PHMJEDCH_02223	3.21e-74	-	-	-	M	-	-	-	NLP P60 protein
PHMJEDCH_02225	1.07e-81	-	3.5.1.28	-	M	ko:K01447	-	ko00000,ko01000	Ami_2
PHMJEDCH_02226	2.95e-37	xhlB	-	-	S	-	-	-	SPP1 phage holin
PHMJEDCH_02227	1.19e-40	xhlA	-	-	S	-	-	-	Haemolysin XhlA
PHMJEDCH_02228	1.64e-24	xkdX	-	-	-	-	-	-	-
PHMJEDCH_02230	4.93e-71	-	-	-	-	-	-	-	-
PHMJEDCH_02231	4.28e-79	-	-	-	-	-	-	-	-
PHMJEDCH_02232	4.86e-126	-	-	-	S	-	-	-	homolog of phage Mu protein gp47
PHMJEDCH_02233	4.16e-33	-	-	-	S	-	-	-	Protein of unknown function (DUF2634)
PHMJEDCH_02234	6.47e-35	-	-	-	-	-	-	-	-
PHMJEDCH_02235	2.04e-108	-	-	-	-	-	-	-	-
PHMJEDCH_02236	5.45e-31	-	-	-	-	-	-	-	-
PHMJEDCH_02237	9.44e-55	-	-	-	M	-	-	-	LysM domain
PHMJEDCH_02238	1.88e-181	-	-	-	N	-	-	-	phage tail tape measure protein
PHMJEDCH_02239	1.65e-19	-	-	-	-	-	-	-	-
PHMJEDCH_02240	2.25e-46	-	-	-	-	-	-	-	-
PHMJEDCH_02241	1.78e-130	-	-	-	S	-	-	-	Protein of unknown function (DUF3383)
PHMJEDCH_02242	1.47e-41	-	-	-	-	-	-	-	-
PHMJEDCH_02244	1.21e-61	-	-	-	-	-	-	-	-
PHMJEDCH_02246	1.74e-40	-	-	-	S	-	-	-	Phage Mu protein F like protein
PHMJEDCH_02248	8.89e-154	-	-	-	S	-	-	-	P22 coat protein - gene protein 5
PHMJEDCH_02249	9.22e-69	-	-	-	S	-	-	-	Domain of unknown function (DUF4355)
PHMJEDCH_02251	2.48e-193	-	-	-	S	-	-	-	Phage portal protein, SPP1 Gp6-like
PHMJEDCH_02252	2.46e-233	-	-	-	S	-	-	-	Terminase-like family
PHMJEDCH_02253	6.46e-104	yqaS	-	-	L	-	-	-	DNA packaging
PHMJEDCH_02256	4.05e-61	-	-	-	L	-	-	-	Transposase
PHMJEDCH_02260	3.08e-59	-	4.6.1.1	-	T	ko:K01768	ko00230,ko02025,ko04113,ko04213,map00230,map02025,map04113,map04213	ko00000,ko00001,ko00002,ko01000	Pfam Adenylate and Guanylate cyclase catalytic domain
PHMJEDCH_02262	3.12e-61	-	-	-	-	-	-	-	-
PHMJEDCH_02265	6.17e-85	-	-	-	-	-	-	-	-
PHMJEDCH_02266	5.5e-201	-	-	-	EH	-	-	-	sulfate reduction
PHMJEDCH_02268	1.81e-33	-	-	-	-	-	-	-	-
PHMJEDCH_02271	1.16e-23	yqaO	-	-	S	-	-	-	Phage-like element PBSX protein XtrA
PHMJEDCH_02273	1.07e-76	rusA	-	-	L	-	-	-	Endodeoxyribonuclease RusA
PHMJEDCH_02275	1.41e-83	yqaM	-	-	L	-	-	-	IstB-like ATP binding protein
PHMJEDCH_02276	1.22e-97	yqaL	-	-	L	-	-	-	DnaD domain protein
PHMJEDCH_02278	2.07e-86	pi112	-	-	L	-	-	-	PDDEXK-like domain of unknown function (DUF3799)
PHMJEDCH_02279	3.11e-127	-	-	-	-	-	-	-	-
PHMJEDCH_02283	5.41e-109	-	-	-	-	-	-	-	-
PHMJEDCH_02284	5.71e-22	-	-	-	S	-	-	-	Helix-turn-helix domain
PHMJEDCH_02285	7.04e-08	-	-	-	K	-	-	-	Helix-turn-helix domain
PHMJEDCH_02286	4.44e-25	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
PHMJEDCH_02287	5.32e-112	yokF	3.1.31.1	-	L	ko:K01174	-	ko00000,ko01000	RNA catabolic process
PHMJEDCH_02288	1.53e-96	-	-	-	S	-	-	-	Bacterial PH domain
PHMJEDCH_02289	3.5e-63	xkdA	-	-	E	-	-	-	IrrE N-terminal-like domain
PHMJEDCH_02290	7.48e-225	int7	-	-	L	-	-	-	Belongs to the 'phage' integrase family
PHMJEDCH_02292	5.84e-273	metC	4.4.1.8	-	E	ko:K01760	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	cystathionine
PHMJEDCH_02293	2.09e-266	metB	2.5.1.48	-	E	ko:K01739	ko00270,ko00450,ko00920,ko01100,ko01110,ko01130,ko01230,map00270,map00450,map00920,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	cystathionine
PHMJEDCH_02294	1.79e-157	yjcH	-	-	P	ko:K07214	-	ko00000	COG2382 Enterochelin esterase and related enzymes
PHMJEDCH_02295	6.7e-119	yjcG	-	-	J	-	-	-	Belongs to the 2H phosphoesterase superfamily. YjcG family
PHMJEDCH_02296	6.83e-94	yjcF	-	-	S	-	-	-	COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PHMJEDCH_02297	1.19e-45	-	-	-	K	-	-	-	SpoVT / AbrB like domain
PHMJEDCH_02298	1.09e-165	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	AAA domain, putative AbiEii toxin, Type IV TA system
PHMJEDCH_02299	2e-154	-	-	-	S	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 type transporter
PHMJEDCH_02300	6.53e-167	blm	3.5.2.6	-	S	ko:K17837	ko01501,map01501	ko00000,ko00001,ko01000	Belongs to the metallo-beta-lactamase superfamily. Class-B beta-lactamase family
PHMJEDCH_02301	1.62e-44	-	-	-	-	-	-	-	-
PHMJEDCH_02302	0.0	yjcD	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	DNA helicase
PHMJEDCH_02303	1.05e-50	spoVIF	-	-	S	-	-	-	Stage VI sporulation protein F
PHMJEDCH_02304	3.58e-05	-	-	-	S	-	-	-	Protein of unknown function (Tiny_TM_bacill)
PHMJEDCH_02307	1.69e-72	yjcA	-	-	S	-	-	-	Protein of unknown function (DUF1360)
PHMJEDCH_02308	4.61e-69	cotV	-	-	S	ko:K06340	-	ko00000	Spore Coat Protein X and V domain
PHMJEDCH_02309	1.02e-36	cotW	-	-	-	ko:K06341	-	ko00000	-
PHMJEDCH_02310	3.55e-98	cotX	-	-	S	ko:K06342	-	ko00000	Spore Coat Protein X and V domain
PHMJEDCH_02311	1.75e-120	cotY	-	-	S	ko:K06343	-	ko00000	Spore coat protein Z
PHMJEDCH_02312	3.35e-105	cotZ	-	-	S	ko:K06344	-	ko00000	Spore coat protein
PHMJEDCH_02313	2.47e-100	yjbX	-	-	S	-	-	-	Spore coat protein
PHMJEDCH_02314	1.38e-179	fabI	1.3.1.10, 1.3.1.9	-	I	ko:K00208	ko00061,ko00333,ko00780,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Enoyl- acyl-carrier-protein reductase NADH
PHMJEDCH_02315	2.99e-180	thiD	2.7.1.49, 2.7.4.7	-	H	ko:K00941	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Phosphomethylpyrimidine kinase
PHMJEDCH_02316	7.09e-228	thiF	2.7.7.73, 2.7.7.80	-	H	ko:K03148,ko:K21029	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000	COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2
PHMJEDCH_02317	7.36e-173	thiG	2.8.1.10	-	H	ko:K03149	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000	Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S
PHMJEDCH_02318	5.3e-40	thiS	-	-	H	ko:K03154	ko04122,map04122	ko00000,ko00001	Thiamine biosynthesis
PHMJEDCH_02319	8.33e-255	thiO	1.4.3.19, 1.4.5.1	-	E	ko:K00285,ko:K03153	ko00360,ko00730,ko01100,map00360,map00730,map01100	ko00000,ko00001,ko01000	Glycine oxidase
PHMJEDCH_02320	2.91e-132	tenI	5.3.99.10	-	H	ko:K10810	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000,ko03000	Transcriptional regulator TenI
PHMJEDCH_02321	2.06e-170	tenA	3.5.99.2	-	K	ko:K03707	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000,ko03000	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
PHMJEDCH_02322	0.0	yjbQ	-	-	P	ko:K03455,ko:K03499	-	ko00000,ko02000	Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
PHMJEDCH_02323	1.1e-176	prpE	3.1.3.16, 3.6.1.41	-	T	ko:K01090,ko:K01525	ko00230,map00230	ko00000,ko00001,ko01000	Asymmetrically hydrolyzes Ap4p to yield AMP and ATP
PHMJEDCH_02324	2.7e-201	rluD	5.4.99.23, 5.4.99.28, 5.4.99.29	-	J	ko:K06177,ko:K06180	-	ko00000,ko01000,ko03009,ko03016	Responsible for synthesis of pseudouridine from uracil
PHMJEDCH_02325	6.92e-193	nadK	2.7.1.23	-	G	ko:K00858	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
PHMJEDCH_02326	3.67e-138	yjbM	2.7.6.5	-	S	ko:K07816	ko00230,map00230	ko00000,ko00001,ko01000	GTP pyrophosphokinase
PHMJEDCH_02327	3.37e-79	yjbL	-	-	S	-	-	-	Belongs to the UPF0738 family
PHMJEDCH_02328	8.1e-118	yjbK	-	-	S	-	-	-	protein conserved in bacteria
PHMJEDCH_02329	1.15e-138	yjbJ	-	-	M	-	-	-	COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains)
PHMJEDCH_02330	6.79e-91	yjbI	-	-	S	ko:K06886	-	ko00000	Bacterial-like globin
PHMJEDCH_02331	9.23e-215	yjbH	-	-	Q	-	-	-	dithiol-disulfide isomerase involved in polyketide biosynthesis
PHMJEDCH_02332	3.14e-27	-	-	-	-	-	-	-	-
PHMJEDCH_02333	0.0	pepF	-	-	E	ko:K08602	-	ko00000,ko01000,ko01002	oligoendopeptidase F
PHMJEDCH_02334	1.14e-256	coiA	-	-	S	ko:K06198	-	ko00000	Competence protein
PHMJEDCH_02335	2.3e-148	mecA	-	-	NOT	ko:K16511	-	ko00000	Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis. Acts negatively in the development of competence by binding ComK and recruiting it to the ClpCP protease. When overexpressed, inhibits sporulation. Also involved in Spx degradation by ClpC
PHMJEDCH_02336	2.28e-140	yjbE	-	-	P	-	-	-	Integral membrane protein TerC family
PHMJEDCH_02337	2.47e-88	spxA	-	-	K	ko:K16509	-	ko00000	Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
PHMJEDCH_02338	1.04e-130	yjbC	-	-	K	-	-	-	COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PHMJEDCH_02339	3.04e-280	-	-	-	S	-	-	-	Putative glycosyl hydrolase domain
PHMJEDCH_02340	1e-216	oppF	-	-	E	ko:K10823	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
PHMJEDCH_02341	1.96e-252	oppD	-	-	P	ko:K02031,ko:K15583,ko:K16202	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
PHMJEDCH_02342	1.46e-209	oppC	-	-	EP	ko:K15582,ko:K16201	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	COG1173 ABC-type dipeptide oligopeptide nickel transport systems, permease components
PHMJEDCH_02343	2.08e-212	oppB	-	-	P	ko:K15581	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	COG0601 ABC-type dipeptide oligopeptide nickel transport systems, permease components
PHMJEDCH_02344	0.0	oppA	-	-	E	ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
PHMJEDCH_02345	8.74e-235	trpS	6.1.1.2	-	J	ko:K01867	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Tryptophanyl-tRNA synthetase
PHMJEDCH_02346	5.28e-189	yjbA	-	-	S	-	-	-	Belongs to the UPF0736 family
PHMJEDCH_02347	7.81e-209	appC	-	-	EP	ko:K02034	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	COG1173 ABC-type dipeptide oligopeptide nickel transport systems, permease components
PHMJEDCH_02348	8.55e-219	appB	-	-	P	ko:K02033	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	COG0601 ABC-type dipeptide oligopeptide nickel transport systems, permease components
PHMJEDCH_02349	0.0	appA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	COG0747 ABC-type dipeptide transport system, periplasmic component
PHMJEDCH_02350	1.1e-232	appF	-	-	E	ko:K02032,ko:K10823	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
PHMJEDCH_02351	4.64e-229	appD	-	-	P	ko:K02031,ko:K15583,ko:K16202	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
PHMJEDCH_02352	4.99e-179	yjaZ	-	-	O	-	-	-	Zn-dependent protease
PHMJEDCH_02353	1.24e-296	fabF	2.3.1.179	-	I	ko:K09458	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
PHMJEDCH_02354	1.26e-218	fabH	2.3.1.180	-	I	ko:K00648	ko00061,ko01100,ko01212,map00061,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
PHMJEDCH_02355	1.46e-37	yjzB	-	-	-	-	-	-	-
PHMJEDCH_02356	3.74e-36	comZ	-	-	S	ko:K02254	-	ko00000,ko02044	ComZ
PHMJEDCH_02357	8.66e-209	med	-	-	S	ko:K05519,ko:K07335	-	ko00000,ko03000	Transcriptional activator protein med
PHMJEDCH_02358	7.04e-127	yjaV	-	-	-	-	-	-	-
PHMJEDCH_02359	6.59e-171	yjaU	-	-	I	-	-	-	carboxylic ester hydrolase activity
PHMJEDCH_02360	3.71e-31	yjzD	-	-	S	-	-	-	Protein of unknown function (DUF2929)
PHMJEDCH_02361	2.07e-38	yjzC	-	-	S	-	-	-	YjzC-like protein
PHMJEDCH_02362	1.78e-220	argF	2.1.3.3	-	E	ko:K00611	ko00220,ko01100,ko01110,ko01130,ko01230,map00220,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
PHMJEDCH_02363	0.0	carB	6.3.5.5	-	EF	ko:K01955	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthetase ammonia chain
PHMJEDCH_02364	4.59e-248	carA	6.3.5.5	-	F	ko:K01956	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthetase glutamine chain
PHMJEDCH_02365	5.32e-266	argD	2.6.1.11, 2.6.1.17	-	E	ko:K00821	ko00220,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00220,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	acetylornithine aminotransferase
PHMJEDCH_02366	3.58e-166	argB	2.7.2.8	-	F	ko:K00930	ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the acetylglutamate kinase family. ArgB subfamily
PHMJEDCH_02367	4.35e-282	argJ	2.3.1.1, 2.3.1.35	-	E	ko:K00620	ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
PHMJEDCH_02368	4.41e-247	argC	1.2.1.38	-	E	ko:K00145	ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
PHMJEDCH_02369	4.44e-117	yitZ	-	-	G	-	-	-	Major Facilitator Superfamily
PHMJEDCH_02370	1.54e-97	yitY	-	-	C	-	-	-	D-arabinono-1,4-lactone oxidase
PHMJEDCH_02371	5.49e-190	deoB	5.4.2.7	-	G	ko:K01839	ko00030,ko00230,map00030,map00230	ko00000,ko00001,ko01000	Phosphotransfer between the C1 and C5 carbon atoms of pentose
PHMJEDCH_02372	1.78e-210	xerD	-	-	L	ko:K04763	-	ko00000,ko03036	recombinase XerD
PHMJEDCH_02373	2.73e-50	-	-	-	S	-	-	-	Protein of unknown function (DUF4227)
PHMJEDCH_02374	3.08e-102	fur	-	-	P	ko:K03711	-	ko00000,ko03000	Belongs to the Fur family
PHMJEDCH_02375	4.12e-141	spoIIM	-	-	S	ko:K06384	-	ko00000	Required for complete septum migration and engulfment of the forespore compartment during sporulation. Required for stabilizing and recruiting of SpoIIP to the septal membrane
PHMJEDCH_02376	2.87e-43	yqkK	-	-	-	-	-	-	-
PHMJEDCH_02377	5.05e-33	-	-	-	-	-	-	-	-
PHMJEDCH_02378	9.28e-307	mleA	1.1.1.38	-	C	ko:K00027	ko00620,ko01200,ko02020,map00620,map01200,map02020	ko00000,ko00001,ko01000	malic enzyme
PHMJEDCH_02379	3.56e-313	mleN	-	-	C	ko:K03315	-	ko00000,ko02000	Na H antiporter
PHMJEDCH_02380	0.0	aspA	4.3.1.1	-	E	ko:K01744	ko00250,ko01100,map00250,map01100	ko00000,ko00001,ko01000	Aspartate ammonia-lyase
PHMJEDCH_02381	4.88e-236	ansA	3.5.1.1	-	EJ	ko:K01424	ko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110	ko00000,ko00001,ko01000	L-asparaginase
PHMJEDCH_02382	2.32e-75	ansR	-	-	K	-	-	-	Transcriptional regulator
PHMJEDCH_02383	1.43e-271	yqxK	-	-	L	-	-	-	DNA helicase
PHMJEDCH_02384	1.42e-120	nudF	3.6.1.13	-	L	ko:K01515	ko00230,map00230	ko00000,ko00001,ko01000	Belongs to the Nudix hydrolase family
PHMJEDCH_02385	5.78e-10	-	-	-	S	-	-	-	Protein of unknown function (DUF3936)
PHMJEDCH_02386	2.34e-211	yqkF	-	-	C	-	-	-	oxidoreductases (related to aryl-alcohol dehydrogenases)
PHMJEDCH_02387	3.06e-15	yqkE	-	-	S	-	-	-	Protein of unknown function (DUF3886)
PHMJEDCH_02388	2.61e-213	yqkD	-	-	S	ko:K06889	-	ko00000	COG1073 Hydrolases of the alpha beta superfamily
PHMJEDCH_02389	7.88e-54	yqkC	-	-	S	-	-	-	Protein of unknown function (DUF2552)
PHMJEDCH_02390	1.22e-76	yqkB	-	-	S	-	-	-	Belongs to the HesB IscA family
PHMJEDCH_02391	1.16e-213	yqkA	-	-	K	-	-	-	GrpB protein
PHMJEDCH_02392	1.92e-08	yqjZ	-	-	S	-	-	-	enzyme involved in biosynthesis of extracellular polysaccharides
PHMJEDCH_02393	2.7e-113	yqjY	-	-	K	ko:K06977	-	ko00000	acetyltransferase
PHMJEDCH_02394	6.1e-295	polYB	2.7.7.7	-	L	ko:K02346,ko:K03502	-	ko00000,ko01000,ko03400	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
PHMJEDCH_02395	7.27e-73	-	-	-	S	-	-	-	YolD-like protein
PHMJEDCH_02397	5.73e-206	yueF	-	-	S	-	-	-	transporter activity
PHMJEDCH_02399	3.01e-225	coaA	2.7.1.33	-	F	ko:K00867	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Pantothenic acid kinase
PHMJEDCH_02400	4.1e-307	dsdA	4.3.1.18	-	E	ko:K01753	ko00260,map00260	ko00000,ko00001,ko01000	Belongs to the serine threonine dehydratase family. DsdA subfamily
PHMJEDCH_02401	2.99e-174	yqjQ	-	-	S	ko:K07124	-	ko00000	Belongs to the short-chain dehydrogenases reductases (SDR) family
PHMJEDCH_02402	1.11e-213	yqjP	-	-	S	-	-	-	COG0491 Zn-dependent hydrolases, including glyoxylases
PHMJEDCH_02403	7.56e-181	proC	1.5.1.2	-	E	ko:K00286	ko00330,ko01100,ko01110,ko01130,ko01230,map00330,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
PHMJEDCH_02404	6.67e-204	-	-	-	K	-	-	-	LysR substrate binding domain
PHMJEDCH_02405	2.42e-61	-	-	-	S	-	-	-	GlpM protein
PHMJEDCH_02406	7.32e-247	namA	1.6.99.1	-	C	ko:K00354	-	ko00000,ko01000	Catalyzes the reduction of the double bond of an array of alpha,beta-unsaturated aldehydes and ketones. It also reduces the nitro group of nitroester and nitroaromatic compounds. It could have a role in detoxification processes
PHMJEDCH_02407	1.58e-175	yqjL	-	-	S	-	-	-	hydrolases or acyltransferases (alpha beta hydrolase superfamily)
PHMJEDCH_02408	4.44e-27	rpmG	-	-	J	ko:K02913	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL33 family
PHMJEDCH_02409	2.97e-215	rnz	3.1.26.11	-	S	ko:K00784	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
PHMJEDCH_02410	0.0	zwf	1.1.1.363, 1.1.1.49	-	G	ko:K00036	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,ko05230,map00030,map00480,map01100,map01110,map01120,map01130,map01200,map05230	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
PHMJEDCH_02411	0.0	gnd	1.1.1.343, 1.1.1.44	-	G	ko:K00033	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
PHMJEDCH_02412	7.78e-294	dinB	2.7.7.7	-	L	ko:K02346	-	ko00000,ko01000,ko03400	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
PHMJEDCH_02413	2.26e-35	yqzJ	-	-	-	-	-	-	-
PHMJEDCH_02414	6.56e-188	yidC	-	-	U	ko:K03217	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044,ko03029	Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PHMJEDCH_02415	3.72e-66	yqjE	3.4.11.14, 3.4.11.4	-	E	ko:K01258,ko:K01263	-	ko00000,ko01000,ko01002	COG2195 Di- and tripeptidases
PHMJEDCH_02416	2.09e-172	yqjE	3.4.11.14, 3.4.11.4	-	E	ko:K01258,ko:K01263	-	ko00000,ko01000,ko01002	COG2195 Di- and tripeptidases
PHMJEDCH_02417	0.0	yqjD	2.1.3.15, 6.4.1.3	-	I	ko:K01966	ko00280,ko00630,ko00640,ko01100,ko01120,ko01130,ko01200,map00280,map00630,map00640,map01100,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta)
PHMJEDCH_02418	6.09e-92	mce	5.1.99.1	-	E	ko:K05606	ko00280,ko00630,ko00640,ko00720,ko01100,ko01120,ko01200,map00280,map00630,map00640,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	COG0346 Lactoylglutathione lyase and related lyases
PHMJEDCH_02420	3.99e-118	yqjB	-	-	S	-	-	-	protein conserved in bacteria
PHMJEDCH_02421	1.79e-216	yqjA	-	-	S	-	-	-	Putative aromatic acid exporter C-terminal domain
PHMJEDCH_02422	2.77e-161	artM	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	COG1126 ABC-type polar amino acid transport system, ATPase component
PHMJEDCH_02423	6.03e-141	artQ	-	-	E	ko:K02029	-	ko00000,ko00002,ko02000	COG0765 ABC-type amino acid transport system, permease component
PHMJEDCH_02424	2.18e-170	artP	-	-	ET	ko:K02030	-	ko00000,ko00002,ko02000	Belongs to the bacterial solute-binding protein 3 family
PHMJEDCH_02425	1.68e-99	yqiW	-	-	S	-	-	-	Belongs to the UPF0403 family
PHMJEDCH_02426	3.22e-214	bmrU	-	-	I	-	-	-	COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase
PHMJEDCH_02427	2.69e-265	bkdB	2.3.1.12, 2.3.1.168	-	C	ko:K00627,ko:K09699	ko00010,ko00020,ko00280,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00280,map00620,map00640,map01100,map01110,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
PHMJEDCH_02428	4e-234	bfmBAB	1.2.4.4	-	C	ko:K00167,ko:K21417	ko00280,ko00640,ko01100,ko01110,ko01130,map00280,map00640,map01100,map01110,map01130	br01601,ko00000,ko00001,ko00002,ko01000	COG0022 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit
PHMJEDCH_02429	4.18e-217	bfmBAA	1.2.4.4	-	C	ko:K00166	ko00280,ko00640,ko01100,ko01110,ko01130,map00280,map00640,map01100,map01110,map01130	br01601,ko00000,ko00001,ko00002,ko01000	COG1071 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit
PHMJEDCH_02430	0.0	bfmBC	1.8.1.4	-	C	ko:K00382	ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000,ko04147	COG1249 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes
PHMJEDCH_02431	7.78e-260	buk	2.7.2.7	-	C	ko:K00929	ko00650,ko01100,map00650,map01100	ko00000,ko00001,ko01000	Belongs to the acetokinase family
PHMJEDCH_02432	5.27e-260	ldh	1.4.1.9	-	E	ko:K00263	ko00280,ko00290,ko01100,ko01110,ko01130,map00280,map00290,map01100,map01110,map01130	ko00000,ko00001,ko01000	Belongs to the Glu Leu Phe Val dehydrogenases family
PHMJEDCH_02433	1.53e-191	ptb	2.3.1.19	-	C	ko:K00634	ko00650,ko01100,map00650,map01100	ko00000,ko00001,ko01000	phosphate butyryltransferase
PHMJEDCH_02434	0.0	bkdR	-	-	KT	-	-	-	Transcriptional regulator
PHMJEDCH_02435	7.32e-46	yqzF	-	-	S	-	-	-	Protein of unknown function (DUF2627)
PHMJEDCH_02436	7.1e-199	prpB	4.1.3.30, 5.4.2.9	-	G	ko:K01841,ko:K03417	ko00440,ko00640,ko01100,ko01120,ko01130,map00440,map00640,map01100,map01120,map01130	ko00000,ko00001,ko01000	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
PHMJEDCH_02437	0.0	prpD	4.2.1.79	-	S	ko:K01720	ko00640,map00640	ko00000,ko00001,ko01000	2-methylcitrate dehydratase
PHMJEDCH_02438	9.85e-261	mmgD	2.3.3.1	-	C	ko:K01647	ko00020,ko00630,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map01100,map01110,map01120,map01130,map01200,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Belongs to the citrate synthase family
PHMJEDCH_02439	7.69e-255	mmgC	-	-	I	ko:K18244	-	ko00000,ko01000	acyl-CoA dehydrogenase
PHMJEDCH_02440	1.86e-185	mmgB	1.1.1.157	-	I	ko:K00074	ko00360,ko00362,ko00650,ko01100,ko01120,map00360,map00362,map00650,map01100,map01120	ko00000,ko00001,ko01000	Dehydrogenase
PHMJEDCH_02441	1.21e-266	mmgA	2.3.1.9	-	I	ko:K00626	ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the thiolase family
PHMJEDCH_02442	1.04e-163	yqiK	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	glycerophosphoryl diester phosphodiesterase
PHMJEDCH_02443	1.94e-127	lytC_1	3.5.1.28	-	M	ko:K01448	ko01503,map01503	ko00000,ko00001,ko00002,ko01000,ko01011,ko03036	Cell wall hydrolase autolysin
PHMJEDCH_02445	2.52e-119	-	-	-	P	-	-	-	Probably functions as a manganese efflux pump
PHMJEDCH_02446	3.85e-144	-	-	-	K	-	-	-	Protein of unknown function (DUF1232)
PHMJEDCH_02448	2.85e-266	yqiG	-	-	C	-	-	-	COG1902 NADH flavin oxidoreductases, Old Yellow Enzyme family
PHMJEDCH_02451	5.03e-259	alr	5.1.1.1	-	E	ko:K01775	ko00473,ko01100,ko01502,map00473,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
PHMJEDCH_02453	8.63e-127	spo0A	-	-	KT	ko:K07699	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko02022	May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process
PHMJEDCH_02454	5.48e-298	spoIVB	3.4.21.116	-	M	ko:K06399	-	ko00000,ko01000,ko01002	Stage IV sporulation protein B
PHMJEDCH_02455	0.0	recN	-	-	L	ko:K03631	-	ko00000,ko03400	May be involved in recombinational repair of damaged DNA
PHMJEDCH_02456	1.03e-100	argR	-	-	K	ko:K03402	-	ko00000,ko03000	Regulates arginine biosynthesis genes
PHMJEDCH_02457	2.69e-193	rrmJ	2.1.1.226, 2.1.1.227	-	J	ko:K06442	-	ko00000,ko01000,ko03009	rRNA methylase
PHMJEDCH_02458	0.0	dxs	2.2.1.7	-	H	ko:K01662	ko00730,ko00900,ko01100,ko01110,ko01130,map00730,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
PHMJEDCH_02459	7.16e-201	ispA	2.5.1.1, 2.5.1.10, 2.5.1.29	-	H	ko:K13789	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko01006	Belongs to the FPP GGPP synthase family
PHMJEDCH_02460	4.44e-51	xseB	3.1.11.6	-	L	ko:K03602	ko03430,map03430	ko00000,ko00001,ko01000,ko03400	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PHMJEDCH_02461	5.36e-308	xseA	3.1.11.6	-	L	ko:K03601	ko03430,map03430	ko00000,ko00001,ko01000,ko03400	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PHMJEDCH_02462	2.51e-199	folD	1.5.1.5, 3.5.4.9	-	F	ko:K01491	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
PHMJEDCH_02463	2.58e-85	nusB	-	-	K	ko:K03625	-	ko00000,ko03009,ko03021	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
PHMJEDCH_02464	5.53e-87	yqhY	-	-	S	-	-	-	protein conserved in bacteria
PHMJEDCH_02465	0.0	accC	6.3.4.14, 6.4.1.2	-	I	ko:K01961	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002,ko01000	An AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism
PHMJEDCH_02466	2.59e-83	accB	-	-	I	ko:K02160	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002	first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
PHMJEDCH_02467	1.88e-86	spoIIIAH	-	-	S	ko:K06397	-	ko00000	SpoIIIAH-like protein
PHMJEDCH_02468	1.3e-145	spoIIIAG	-	-	S	ko:K06396	-	ko00000	stage III sporulation protein AG
PHMJEDCH_02469	1.74e-129	spoIIIAF	-	-	S	ko:K06395	-	ko00000	Stage III sporulation protein AF (Spore_III_AF)
PHMJEDCH_02470	3.02e-260	spoIIIAE	-	-	S	ko:K06394	-	ko00000	stage III sporulation protein AE
PHMJEDCH_02471	5.28e-55	spoIIIAD	-	-	S	ko:K06393	-	ko00000	Stage III sporulation protein AD
PHMJEDCH_02472	1.63e-39	spoIIIAC	-	-	S	ko:K06392	-	ko00000	stage III sporulation protein AC
PHMJEDCH_02473	2.23e-108	spoIIIAB	-	-	S	ko:K06391	-	ko00000	Stage III sporulation protein
PHMJEDCH_02474	7.55e-213	spoIIIAA	-	-	S	ko:K06390	-	ko00000	stage III sporulation protein AA
PHMJEDCH_02475	1.64e-48	yqhV	-	-	S	-	-	-	Protein of unknown function (DUF2619)
PHMJEDCH_02476	9.69e-128	efp	-	-	J	ko:K02356	-	ko00000,ko03012	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
PHMJEDCH_02477	2.75e-245	yqhT	3.4.11.9, 3.4.13.9	-	E	ko:K01262,ko:K01271	-	ko00000,ko01000,ko01002	COG0006 Xaa-Pro aminopeptidase
PHMJEDCH_02478	2.13e-113	yqhR	-	-	S	-	-	-	Conserved membrane protein YqhR
PHMJEDCH_02479	1.12e-215	yqhQ	-	-	S	-	-	-	Protein of unknown function (DUF1385)
PHMJEDCH_02480	2.46e-79	yqhP	-	-	-	-	-	-	-
PHMJEDCH_02481	2.51e-203	yqhO	-	-	S	ko:K07001	-	ko00000	esterase of the alpha-beta hydrolase superfamily
PHMJEDCH_02482	1.14e-96	mntR	-	-	K	ko:K03709	-	ko00000,ko03000	Involved in manganese homeostasis. Might activate the transcription of the mntABCD operon
PHMJEDCH_02483	1.25e-201	lipM	6.3.1.20	-	H	ko:K03800	ko00785,ko01100,map00785,map01100	ko00000,ko00001,ko01000	Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domain of GcvH, an intermediate carrier during protein lipoylation
PHMJEDCH_02484	2.33e-84	yqhL	-	-	P	-	-	-	COG0607 Rhodanese-related sulfurtransferase
PHMJEDCH_02485	0.0	gcvPB	1.4.4.2	-	E	ko:K00283	ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200	ko00000,ko00001,ko01000	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
PHMJEDCH_02486	2.14e-313	gcvPA	1.4.4.2	-	E	ko:K00282	ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200	ko00000,ko00001,ko01000	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
PHMJEDCH_02487	7.69e-254	gcvT	2.1.2.10	-	E	ko:K00605	ko00260,ko00630,ko00670,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map00670,map01100,map01110,map01130,map01200	ko00000,ko00001,ko00002,ko01000	The glycine cleavage system catalyzes the degradation of glycine
PHMJEDCH_02488	0.0	yqhH	-	-	L	-	-	-	COG0553 Superfamily II DNA RNA helicases, SNF2 family
PHMJEDCH_02489	8.42e-193	yqhG	-	-	S	-	-	-	Bacterial protein YqhG of unknown function
PHMJEDCH_02490	1.3e-29	sinI	-	-	S	ko:K06372	-	ko00000	Anti-repressor SinI
PHMJEDCH_02491	2.27e-71	sinR	-	-	K	ko:K19449	-	ko00000,ko03000	transcriptional
PHMJEDCH_02492	8.28e-178	tasA_1	-	-	S	ko:K06336	-	ko00000,ko01002	Cell division protein FtsN
PHMJEDCH_02493	5.48e-95	sipW	3.4.21.89	-	U	ko:K13280	ko03060,map03060	ko00000,ko00001,ko01000,ko01002	Signal peptidase
PHMJEDCH_02494	7.32e-144	yqxM	-	-	-	ko:K19433	-	ko00000	-
PHMJEDCH_02495	3.98e-70	yqzG	-	-	S	-	-	-	Protein of unknown function (DUF3889)
PHMJEDCH_02496	9.56e-35	yqzE	-	-	S	-	-	-	YqzE-like protein
PHMJEDCH_02497	8.44e-75	-	-	-	S	ko:K02249	-	ko00000,ko00002,ko02044	ComG operon protein 7
PHMJEDCH_02498	2.45e-28	comGF	-	-	U	ko:K02248	-	ko00000,ko00002,ko02044	Putative Competence protein ComGF
PHMJEDCH_02499	1.56e-26	comGE	-	-	-	ko:K02247	-	ko00000,ko00002,ko02044	-
PHMJEDCH_02500	3.1e-91	-	-	-	NU	ko:K02246,ko:K08084	-	ko00000,ko00002,ko02044	Tfp pilus assembly protein FimT
PHMJEDCH_02501	1.5e-64	comGC	-	-	U	ko:K02245	-	ko00000,ko00002,ko02044	Required for transformation and DNA binding
PHMJEDCH_02502	5.79e-227	comGB	-	-	NU	ko:K02244	-	ko00000,ko00002,ko02044	COG1459 Type II secretory pathway, component PulF
PHMJEDCH_02503	5.85e-253	comGA	-	-	NU	ko:K02243	-	ko00000,ko00002,ko02044	COG2804 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
PHMJEDCH_02504	1.34e-231	yqxL	-	-	P	-	-	-	Mg2 transporter protein
PHMJEDCH_02505	2.13e-294	yqhB	-	-	S	-	-	-	COG1253 Hemolysins and related proteins containing CBS domains
PHMJEDCH_02506	3.19e-178	yqhA	-	-	T	ko:K17763	-	ko00000,ko03021	COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)
PHMJEDCH_02508	4.34e-82	yqgZ	1.20.4.1	-	P	ko:K00537,ko:K16509	-	ko00000,ko01000	Belongs to the ArsC family
PHMJEDCH_02509	4.19e-50	yqgY	-	-	S	-	-	-	Protein of unknown function (DUF2626)
PHMJEDCH_02510	2e-156	yqgX	3.1.2.6	-	S	ko:K01069	ko00620,map00620	ko00000,ko00001,ko01000	COG0491 Zn-dependent hydrolases, including glyoxylases
PHMJEDCH_02511	1.07e-28	yqgW	-	-	S	-	-	-	Protein of unknown function (DUF2759)
PHMJEDCH_02512	2.02e-63	dglA	-	-	S	-	-	-	Thiamine-binding protein
PHMJEDCH_02513	1.06e-48	yqgU	-	-	-	-	-	-	-
PHMJEDCH_02514	9.93e-162	yqgU	-	-	-	-	-	-	-
PHMJEDCH_02515	1.33e-256	yqgT	3.4.19.11	-	E	ko:K01308	-	ko00000,ko01000,ko01002	Gamma-D-glutamyl-L-diamino acid endopeptidase
PHMJEDCH_02516	1.18e-227	glcK	2.7.1.2	-	G	ko:K00845	ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Glucokinase
PHMJEDCH_02517	1.87e-37	yqgQ	-	-	S	-	-	-	Protein conserved in bacteria
PHMJEDCH_02518	2.58e-269	nhaC	-	-	C	ko:K03315	-	ko00000,ko02000	Na H antiporter
PHMJEDCH_02519	5.38e-11	yqgO	-	-	-	-	-	-	-
PHMJEDCH_02520	7.01e-116	fthC	6.3.3.2	-	H	ko:K01934	ko00670,ko01100,map00670,map01100	ko00000,ko00001,ko01000	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
PHMJEDCH_02521	6.25e-29	rpmG	-	-	J	ko:K02913	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL33 family
PHMJEDCH_02522	3.42e-68	yqzD	-	-	-	-	-	-	-
PHMJEDCH_02523	1.97e-96	yqzC	-	-	S	-	-	-	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
PHMJEDCH_02524	2.71e-187	pstB	3.6.3.27	-	P	ko:K02036	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PHMJEDCH_02525	2.99e-179	pstBA	3.6.3.27	-	P	ko:K02036	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PHMJEDCH_02526	1.88e-195	pstA	-	-	P	ko:K02038	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Phosphate transport system permease
PHMJEDCH_02527	1.75e-203	pstC	-	-	P	ko:K02037	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	probably responsible for the translocation of the substrate across the membrane
PHMJEDCH_02528	8.72e-204	pstS	-	-	P	ko:K02040	ko02010,ko02020,ko05152,map02010,map02020,map05152	ko00000,ko00001,ko00002,ko02000	Phosphate
PHMJEDCH_02529	0.0	pbpA	-	-	M	ko:K21465,ko:K21466	ko00550,map00550	ko00000,ko00001,ko01011	penicillin-binding protein
PHMJEDCH_02530	5.94e-283	yqgE	-	-	EGP	ko:K08222	-	ko00000,ko02000	Major facilitator superfamily
PHMJEDCH_02531	4.22e-148	sodA	1.15.1.1	-	P	ko:K04564	ko04013,ko04068,ko04146,ko04211,ko04212,ko04213,ko05016,map04013,map04068,map04146,map04211,map04212,map04213,map05016	ko00000,ko00001,ko01000	radicals which are normally produced within the cells and which are toxic to biological systems
PHMJEDCH_02532	7.59e-97	yqgC	-	-	S	ko:K09793	-	ko00000	protein conserved in bacteria
PHMJEDCH_02533	2.44e-164	yqgB	-	-	S	-	-	-	Protein of unknown function (DUF1189)
PHMJEDCH_02534	5.95e-59	yqfZ	-	-	M	ko:K06417	-	ko00000	LysM domain
PHMJEDCH_02535	2.3e-255	ispG	1.17.7.1, 1.17.7.3	-	I	ko:K03526	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
PHMJEDCH_02536	3.9e-79	yqfX	-	-	S	-	-	-	membrane
PHMJEDCH_02537	3.23e-139	yqfW	-	-	S	ko:K05967	-	ko00000	Belongs to the 5'(3')-deoxyribonucleotidase family
PHMJEDCH_02538	2.63e-99	zur	-	-	P	ko:K02076	-	ko00000,ko03000	Belongs to the Fur family
PHMJEDCH_02539	2.47e-195	yqfU	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2179)
PHMJEDCH_02540	2.48e-48	yqfT	-	-	S	-	-	-	Protein of unknown function (DUF2624)
PHMJEDCH_02541	5.3e-208	nfo	3.1.21.2	-	L	ko:K01151	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
PHMJEDCH_02542	3.91e-304	cshB	3.6.4.13	-	JKL	ko:K05592,ko:K18692	ko03018,map03018	ko00000,ko00001,ko01000,ko03009,ko03019	DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
PHMJEDCH_02543	7.12e-57	yqfQ	-	-	S	-	-	-	YqfQ-like protein
PHMJEDCH_02544	4.12e-225	ispH	1.17.7.4	-	IM	ko:K03527	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
PHMJEDCH_02545	2.97e-266	yqfO	-	-	S	-	-	-	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
PHMJEDCH_02546	1.65e-159	trmK	2.1.1.217	-	S	ko:K06967	-	ko00000,ko01000,ko03016	SAM-dependent methyltransferase
PHMJEDCH_02547	7.67e-80	cccA	-	-	C	ko:K13300	-	ko00000	COG2010 Cytochrome c, mono- and diheme variants
PHMJEDCH_02548	8e-255	sigA	-	-	K	ko:K03086	-	ko00000,ko03021	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
PHMJEDCH_02549	0.0	dnaG	-	-	L	ko:K02316	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
PHMJEDCH_02550	9.16e-111	yqxD	-	-	S	ko:K09768	-	ko00000	Belongs to the UPF0178 family
PHMJEDCH_02551	1.75e-188	yqfL	2.7.11.33, 2.7.4.28	-	S	ko:K09773	-	ko00000,ko01000	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
PHMJEDCH_02552	3.41e-144	ccpN	-	-	K	-	-	-	CBS domain
PHMJEDCH_02553	0.0	glyS	6.1.1.14	-	J	ko:K01879	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Glycyl-tRNA synthetase beta subunit
PHMJEDCH_02554	2.03e-220	glyQ	6.1.1.14	-	J	ko:K01878	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	glycyl-tRNA synthetase alpha subunit
PHMJEDCH_02555	2.31e-181	recO	-	-	L	ko:K03584	ko03440,map03440	ko00000,ko00001,ko03400	Involved in DNA repair and RecF pathway recombination
PHMJEDCH_02556	6e-24	-	-	-	S	-	-	-	YqzL-like protein
PHMJEDCH_02557	2.01e-214	era	-	-	S	ko:K03595	-	ko00000,ko03009,ko03029	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
PHMJEDCH_02558	1.92e-92	cdd	3.5.4.5	-	F	ko:K01489	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis
PHMJEDCH_02559	8.76e-82	dgkA	2.7.1.107, 2.7.1.66	-	M	ko:K00887,ko:K00901	ko00550,ko00561,ko00564,ko01100,ko01110,ko04070,ko04072,ko05231,map00550,map00561,map00564,map01100,map01110,map04070,map04072,map05231	ko00000,ko00001,ko01000	Diacylglycerol kinase
PHMJEDCH_02560	2.91e-104	ybeY	-	-	S	ko:K07042	-	ko00000,ko03009	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
PHMJEDCH_02561	0.0	yqfF	-	-	S	ko:K07037	-	ko00000	membrane-associated HD superfamily hydrolase
PHMJEDCH_02562	4.78e-222	phoH	-	-	T	ko:K06217	-	ko00000	Phosphate starvation-inducible protein PhoH
PHMJEDCH_02563	7.99e-273	yqfD	-	-	S	ko:K06438	-	ko00000	Stage IV sporulation
PHMJEDCH_02564	3.57e-61	yqfC	-	-	S	-	-	-	sporulation protein YqfC
PHMJEDCH_02565	1.28e-48	yqfB	-	-	-	-	-	-	-
PHMJEDCH_02566	1.22e-186	yqfA	-	-	S	-	-	-	UPF0365 protein
PHMJEDCH_02567	7.88e-288	yqeZ	-	-	O	ko:K07403	-	ko00000	COG1030 Membrane-bound serine protease (ClpP class)
PHMJEDCH_02568	7.84e-91	yqeY	-	-	S	ko:K09117	-	ko00000	Yqey-like protein
PHMJEDCH_02569	1.03e-26	rpsU	-	-	J	ko:K02970	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bS21 family
PHMJEDCH_02570	1.4e-194	yqeW	-	-	P	ko:K03324	-	ko00000,ko02000	COG1283 Na phosphate symporter
PHMJEDCH_02571	0.0	yqeV	2.8.4.5	-	J	ko:K18707	-	ko00000,ko01000,ko03016	ribosomal protein S12 methylthiotransferase
PHMJEDCH_02572	1.14e-177	rsmE	2.1.1.193	-	J	ko:K09761	-	ko00000,ko01000,ko03009	Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
PHMJEDCH_02573	7.67e-224	prmA	-	-	J	ko:K02687	-	ko00000,ko01000,ko03009	Methylates ribosomal protein L11
PHMJEDCH_02574	4.72e-264	dnaJ	-	-	O	ko:K03686	-	ko00000,ko03029,ko03110	ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
PHMJEDCH_02575	0.0	dnaK	-	-	O	ko:K04043	ko03018,ko04212,ko05152,map03018,map04212,map05152	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	Heat shock 70 kDa protein
PHMJEDCH_02576	2.08e-106	grpE	-	-	O	ko:K03687	-	ko00000,ko03029,ko03110	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
PHMJEDCH_02577	1.3e-238	hrcA	-	-	K	ko:K03705	-	ko00000,ko03000	Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
PHMJEDCH_02578	1.93e-265	hemN	-	-	H	-	-	-	Involved in the biosynthesis of porphyrin-containing compound
PHMJEDCH_02579	0.0	lepA	-	-	M	ko:K03596	ko05134,map05134	ko00000,ko00001	Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
PHMJEDCH_02580	1.17e-68	yqxA	-	-	S	-	-	-	Protein of unknown function (DUF3679)
PHMJEDCH_02581	2.14e-278	spoIIP	-	-	M	ko:K06385	-	ko00000	stage II sporulation protein P
PHMJEDCH_02582	9.8e-258	gpr	3.4.24.78	-	C	ko:K06012	-	ko00000,ko01000,ko01002	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
PHMJEDCH_02583	1.91e-47	rpsT	-	-	J	ko:K02968	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 16S ribosomal RNA
PHMJEDCH_02584	8.29e-229	holA	2.7.7.7	-	L	ko:K02340	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III delta subunit
PHMJEDCH_02585	7.73e-22	-	-	-	S	-	-	-	YqzM-like protein
PHMJEDCH_02586	0.0	comEC	-	-	S	ko:K02238	-	ko00000,ko00002,ko02044	Competence protein ComEC
PHMJEDCH_02587	8.94e-135	comEB	3.5.4.12	-	F	ko:K01493	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko02044	ComE operon protein 2
PHMJEDCH_02588	3.77e-123	comEA	-	-	L	ko:K02237	-	ko00000,ko00002,ko02044	COG1555 DNA uptake protein and related DNA-binding proteins
PHMJEDCH_02589	1.74e-185	comER	-	-	E	ko:K02239	-	ko00000,ko00002,ko02044	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
PHMJEDCH_02590	4.47e-174	yqeM	-	-	Q	-	-	-	Methyltransferase
PHMJEDCH_02591	1.1e-78	rsfS	-	-	J	ko:K09710	-	ko00000,ko03009	Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
PHMJEDCH_02592	1.13e-131	yqeK	-	-	H	-	-	-	HD superfamily hydrolase involved in NAD metabolism
PHMJEDCH_02593	8.59e-133	nadD	2.7.7.18	-	H	ko:K00969	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
PHMJEDCH_02594	8.62e-59	yhbY	-	-	J	ko:K07574	-	ko00000,ko03009	RNA-binding protein containing KH domain, possibly ribosomal protein
PHMJEDCH_02595	5.24e-195	aroE	1.1.1.25	-	E	ko:K00014	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
PHMJEDCH_02596	1.08e-269	yqeH	-	-	S	ko:K06948	-	ko00000,ko03009	In Bacillus subtilis this enzyme appears to be involved in 30S ribosomal RNA subunit biogenesis
PHMJEDCH_02597	7.28e-122	yqeG	-	-	S	ko:K07015	-	ko00000	hydrolase of the HAD superfamily
PHMJEDCH_02599	7.74e-174	yqeF	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase
PHMJEDCH_02600	2.3e-171	pdaC	3.5.1.104	-	G	ko:K22278	-	ko00000,ko01000	Polysaccharide deacetylase
PHMJEDCH_02601	2.21e-140	-	3.5.1.28	-	M	ko:K01447	-	ko00000,ko01000	n-acetylmuramoyl-L-alanine amidase
PHMJEDCH_02602	7.69e-134	yqeD	-	-	S	-	-	-	SNARE associated Golgi protein
PHMJEDCH_02604	2.92e-254	-	-	-	EGP	-	-	-	Transmembrane secretion effector
PHMJEDCH_02605	1.17e-158	sigK	-	-	K	ko:K03091	-	ko00000,ko03021	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
PHMJEDCH_02606	1.25e-202	-	-	-	S	-	-	-	Carbohydrate esterase, sialic acid-specific acetylesterase
PHMJEDCH_02607	7.88e-116	-	-	-	K	-	-	-	Transcriptional regulator PadR-like family
PHMJEDCH_02608	3.71e-126	yqaC	-	-	F	-	-	-	adenylate kinase activity
PHMJEDCH_02609	6.92e-35	-	-	-	K	-	-	-	acetyltransferase
PHMJEDCH_02610	5.59e-282	tetL	-	-	EGP	ko:K08168	-	ko00000,ko00002,ko01504,ko02000	COG0477 Permeases of the major facilitator superfamily
PHMJEDCH_02611	2.45e-114	-	-	-	S	-	-	-	DinB family
PHMJEDCH_02612	5.58e-179	supH	-	-	S	-	-	-	hydrolase
PHMJEDCH_02613	2.86e-178	supH	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
PHMJEDCH_02614	7.87e-157	-	-	-	K	-	-	-	Helix-turn-helix domain, rpiR family
PHMJEDCH_02615	5.34e-217	manA	5.3.1.8	-	G	ko:K01809	ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	mannose-6-phosphate isomerase
PHMJEDCH_02616	0.0	manP	2.7.1.202	-	G	ko:K02768,ko:K02769,ko:K02770	ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
PHMJEDCH_02617	0.0	manR	-	-	GKT	ko:K02538,ko:K03491	-	ko00000,ko03000	transcriptional antiterminator
PHMJEDCH_02618	1.31e-212	romA	-	-	S	-	-	-	Beta-lactamase superfamily domain
PHMJEDCH_02619	1.26e-95	ebsC	-	-	S	ko:K03976	-	ko00000,ko01000,ko03016	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
PHMJEDCH_02620	3.47e-206	yybE	-	-	K	-	-	-	Transcriptional regulator
PHMJEDCH_02621	8.7e-262	yybF1	-	-	EGP	ko:K08224	-	ko00000,ko02000	COG0477 Permeases of the major facilitator superfamily
PHMJEDCH_02622	0.0	yrhJ	1.14.14.1, 1.6.2.4	-	C	ko:K14338	ko00071,ko00380,ko00627,ko01120,map00071,map00380,map00627,map01120	ko00000,ko00001,ko00199,ko01000	Belongs to the cytochrome P450 family
PHMJEDCH_02623	2.09e-124	-	-	-	K	ko:K22106	-	ko00000,ko03000	Tetracycline repressor, C-terminal all-alpha domain
PHMJEDCH_02624	2.19e-112	yrhH	-	-	Q	-	-	-	methyltransferase
PHMJEDCH_02625	2.37e-07	-	-	-	S	-	-	-	Probable sporulation protein (Bac_small_yrzI)
PHMJEDCH_02626	1.48e-178	yrhG	-	-	P	ko:K21993	-	ko00000,ko02000	Formate nitrite
PHMJEDCH_02627	4.41e-80	yrhF	-	-	S	-	-	-	Uncharacterized conserved protein (DUF2294)
PHMJEDCH_02628	0.0	yrhE	1.17.1.9	-	C	ko:K00123	ko00630,ko00680,ko01100,ko01120,ko01200,map00630,map00680,map01100,map01120,map01200	ko00000,ko00001,ko01000	formate dehydrogenase, alpha subunit
PHMJEDCH_02629	4.38e-102	yrhD	-	-	S	-	-	-	Protein of unknown function (DUF1641)
PHMJEDCH_02630	9.51e-47	yrhC	-	-	S	-	-	-	YrhC-like protein
PHMJEDCH_02631	6.51e-269	mccB	4.4.1.1, 4.4.1.2, 4.4.1.8	-	E	ko:K01760,ko:K17217	ko00260,ko00270,ko00450,ko00920,ko01100,ko01110,ko01130,ko01230,map00260,map00270,map00450,map00920,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	cystathionine
PHMJEDCH_02632	8.52e-212	mccA	2.5.1.134, 2.5.1.47	-	E	ko:K01738,ko:K17216	ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Cysteine synthase
PHMJEDCH_02633	6.59e-160	mtnN	3.2.2.9	-	E	ko:K01243	ko00270,ko01100,ko01230,map00270,map01100,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
PHMJEDCH_02634	3.7e-148	yrrT	-	-	Q	ko:K17462	ko00270,ko01100,ko01230,map00270,map01100,map01230	ko00000,ko00001,ko00002,ko01000	Could be a S-adenosyl-L-methionine-dependent methyltransferase
PHMJEDCH_02635	2.53e-38	yrzA	-	-	S	-	-	-	Protein of unknown function (DUF2536)
PHMJEDCH_02636	6.53e-120	yrrS	-	-	S	-	-	-	Protein of unknown function (DUF1510)
PHMJEDCH_02637	0.0	pbpI	-	-	M	ko:K21468	-	ko00000,ko01011	Penicillin-binding Protein
PHMJEDCH_02638	5.41e-100	greA	-	-	K	ko:K03624	-	ko00000,ko03021	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PHMJEDCH_02639	2.61e-147	udk	2.7.1.48	-	F	ko:K00876	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	Cytidine monophosphokinase
PHMJEDCH_02640	1.8e-310	yrrO	-	-	O	ko:K08303	ko05120,map05120	ko00000,ko00001,ko01000,ko01002	COG0826 Collagenase and related proteases
PHMJEDCH_02641	4.25e-220	yrrN	-	-	O	ko:K08303	ko05120,map05120	ko00000,ko00001,ko01000,ko01002	Peptidase U32
PHMJEDCH_02642	3.4e-146	yrrM	2.1.1.104	-	S	ko:K00588	ko00360,ko00940,ko00941,ko00945,ko01100,ko01110,map00360,map00940,map00941,map00945,map01100,map01110	ko00000,ko00001,ko00002,ko01000	O-methyltransferase
PHMJEDCH_02643	1.71e-244	mltG	-	-	S	ko:K07082	-	ko00000	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
PHMJEDCH_02644	7.2e-61	yrzB	-	-	S	-	-	-	Belongs to the UPF0473 family
PHMJEDCH_02645	1.11e-92	yrrK	-	-	L	ko:K07447	-	ko00000,ko01000	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
PHMJEDCH_02646	1.29e-54	yrzL	-	-	S	-	-	-	Belongs to the UPF0297 family
PHMJEDCH_02647	0.0	alaS	6.1.1.7	-	J	ko:K01872	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
PHMJEDCH_02648	1.39e-222	yrrI	-	-	S	-	-	-	AI-2E family transporter
PHMJEDCH_02649	1.67e-163	glnQ	-	-	E	ko:K09972,ko:K10041	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	COG1126 ABC-type polar amino acid transport system, ATPase component
PHMJEDCH_02650	1.67e-184	glnH	-	-	ET	ko:K09969,ko:K10039	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the bacterial solute-binding protein 3 family
PHMJEDCH_02651	7.62e-138	glnM	-	-	P	ko:K10040	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
PHMJEDCH_02652	1.21e-135	glnP	-	-	P	ko:K10040	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
PHMJEDCH_02653	6.52e-13	-	-	-	S	-	-	-	Protein of unknown function (DUF3918)
PHMJEDCH_02654	8.4e-42	yrzR	-	-	-	-	-	-	-
PHMJEDCH_02655	7.39e-100	yrrD	-	-	S	-	-	-	protein conserved in bacteria
PHMJEDCH_02656	0.0	recD2	3.1.11.5	-	L	ko:K03581	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
PHMJEDCH_02657	1.12e-23	yrrB	-	-	S	-	-	-	COG0457 FOG TPR repeat
PHMJEDCH_02658	1.89e-277	mnmA	2.8.1.13	-	J	ko:K00566	ko04122,map04122	ko00000,ko00001,ko01000,ko03016	Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
PHMJEDCH_02659	2.35e-266	iscS	2.8.1.7	-	E	ko:K04487	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko02048,ko03016,ko03029	Cysteine desulfurase
PHMJEDCH_02660	3.74e-83	cymR	-	-	K	ko:K17472	-	ko00000,ko03000	Transcriptional regulator
PHMJEDCH_02661	4.18e-300	rarA	-	-	L	ko:K07478	-	ko00000	COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase
PHMJEDCH_02662	1.68e-178	yrvM	-	-	H	ko:K22132	-	ko00000,ko03016	COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1
PHMJEDCH_02663	0.0	aspS	6.1.1.12	-	J	ko:K01876	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
PHMJEDCH_02664	7.9e-306	hisS	6.1.1.21	-	J	ko:K01892	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	histidyl-tRNA synthetase
PHMJEDCH_02667	0.0	lytH	3.5.1.28	-	M	ko:K01448	ko01503,map01503	ko00000,ko00001,ko00002,ko01000,ko01011,ko03036	COG3103 SH3 domain protein
PHMJEDCH_02668	4.07e-97	dtd	-	-	J	ko:K07560	-	ko00000,ko01000,ko03016	rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
PHMJEDCH_02669	0.0	relA	2.7.6.5	-	KT	ko:K00951	ko00230,map00230	ko00000,ko00001,ko01000	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
PHMJEDCH_02670	1.71e-116	apt	2.4.2.7	-	F	ko:K00759	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000,ko04147	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
PHMJEDCH_02671	0.0	recJ	-	-	L	ko:K07462	ko03410,ko03430,ko03440,map03410,map03430,map03440	ko00000,ko00001,ko01000,ko03400	Single-stranded-DNA-specific exonuclease RecJ
PHMJEDCH_02672	7.18e-59	yrvD	-	-	S	-	-	-	Lipopolysaccharide assembly protein A domain
PHMJEDCH_02673	3.74e-104	trkA1	-	-	P	ko:K07228	-	ko00000	regulatory, ligand-binding protein related to C-terminal domains of K channels
PHMJEDCH_02674	0.0	secD	-	-	U	ko:K03072,ko:K12257	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
PHMJEDCH_02675	2.26e-64	yrzD	-	-	S	-	-	-	Post-transcriptional regulator
PHMJEDCH_02676	0.0	spoVB	-	-	S	ko:K06409	-	ko00000,ko02000	COG2244 Membrane protein involved in the export of O-antigen and teichoic acid
PHMJEDCH_02677	1.16e-133	yrbG	-	-	S	-	-	-	membrane
PHMJEDCH_02678	3.7e-80	yrzE	-	-	S	-	-	-	Protein of unknown function (DUF3792)
PHMJEDCH_02679	1.03e-50	yajC	-	-	U	ko:K03210	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Preprotein translocase subunit YajC
PHMJEDCH_02680	1.03e-288	tgt	2.4.2.29	-	F	ko:K00773	-	ko00000,ko01000,ko03016	Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
PHMJEDCH_02681	5.68e-96	queA	2.4.99.17	-	J	ko:K07568	-	ko00000,ko01000,ko03016	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
PHMJEDCH_02682	9.46e-105	queA	2.4.99.17	-	J	ko:K07568	-	ko00000,ko01000,ko03016	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
PHMJEDCH_02683	3.4e-29	yrzS	-	-	S	-	-	-	Protein of unknown function (DUF2905)
PHMJEDCH_02684	6.61e-232	ruvB	3.6.4.12	-	L	ko:K03551	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
PHMJEDCH_02685	8.13e-137	ruvA	3.6.4.12	-	L	ko:K03550	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
PHMJEDCH_02686	1.93e-117	bofC	-	-	S	ko:K06318	-	ko00000	BofC C-terminal domain
PHMJEDCH_02688	1.26e-60	-	-	-	S	ko:K06345	-	ko00000	Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ)
PHMJEDCH_02689	2.07e-217	safA	-	-	M	ko:K06370	-	ko00000	spore coat assembly protein SafA
PHMJEDCH_02690	2.53e-264	nadA	2.5.1.72	-	H	ko:K03517	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
PHMJEDCH_02691	6.72e-183	nadC	2.4.2.19	-	H	ko:K00767	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the NadC ModD family
PHMJEDCH_02692	0.0	nadB	1.4.3.16	-	H	ko:K00278	ko00250,ko00760,ko01100,map00250,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of L-aspartate to iminoaspartate
PHMJEDCH_02693	8.23e-269	nifS	2.8.1.7	-	E	ko:K04487	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko02048,ko03016,ko03029	Cysteine desulfurase
PHMJEDCH_02694	1.49e-115	yrxA	-	-	S	ko:K07105	-	ko00000	small molecule binding protein (contains 3H domain)
PHMJEDCH_02695	4.34e-201	pheA	4.2.1.51	-	E	ko:K04518	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Prephenate dehydratase
PHMJEDCH_02696	5.94e-95	pheB	5.4.99.5	-	S	ko:K06209	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the UPF0735 family
PHMJEDCH_02697	2.37e-309	obg	-	-	S	ko:K03979	-	ko00000,ko01000,ko03009	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
PHMJEDCH_02698	2.87e-137	spo0B	-	-	T	ko:K06375	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko01000	Sporulation initiation phospho-transferase B, C-terminal
PHMJEDCH_02699	7.74e-61	rpmA	-	-	J	ko:K02899	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL27 family
PHMJEDCH_02700	5.78e-74	ysxB	-	-	J	ko:K07584	-	ko00000	ribosomal protein
PHMJEDCH_02701	1.28e-65	rplU	-	-	J	ko:K02888	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein binds to 23S rRNA in the presence of protein L20
PHMJEDCH_02702	3.7e-199	spoIVFB	-	-	S	ko:K06402	-	ko00000,ko01000,ko01002	Stage IV sporulation protein
PHMJEDCH_02703	2.65e-177	spoIVFA	-	-	M	ko:K06401	-	ko00000	COG0739 Membrane proteins related to metalloendopeptidases
PHMJEDCH_02704	1.61e-183	minD	-	-	D	ko:K03609	-	ko00000,ko03036,ko04812	Belongs to the ParA family
PHMJEDCH_02705	1.61e-153	minC	-	-	D	ko:K03610	-	ko00000,ko03036,ko04812	Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization
PHMJEDCH_02706	3.98e-107	mreD	-	-	M	ko:K03571	-	ko00000,ko03036	shape-determining protein
PHMJEDCH_02707	2.51e-201	mreC	-	-	M	ko:K03570	-	ko00000,ko03036	Involved in formation and maintenance of cell shape
PHMJEDCH_02708	2.91e-232	mreB	-	-	D	ko:K03569	-	ko00000,ko02048,ko03036,ko04812	Rod shape-determining protein MreB
PHMJEDCH_02709	1.19e-162	radC	-	-	E	ko:K03630	-	ko00000	Belongs to the UPF0758 family
PHMJEDCH_02710	1.6e-128	maf	-	-	D	ko:K06287	-	ko00000	septum formation protein Maf
PHMJEDCH_02711	2.51e-192	spoIIB	-	-	S	ko:K06380	-	ko00000	Sporulation related domain
PHMJEDCH_02712	1.4e-159	comC	3.4.23.43	-	NOU	ko:K02236,ko:K02654	-	ko00000,ko00002,ko01000,ko01002,ko02035,ko02044	COG1989 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases
PHMJEDCH_02713	2.79e-293	folC	6.3.2.12, 6.3.2.17	-	H	ko:K11754	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the folylpolyglutamate synthase family
PHMJEDCH_02714	0.0	valS	6.1.1.9	-	J	ko:K01873	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
PHMJEDCH_02715	3.61e-34	-	-	-	-	-	-	-	-
PHMJEDCH_02716	3.17e-234	ysxE	-	-	S	-	-	-	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
PHMJEDCH_02717	5.07e-232	spoVID	-	-	M	ko:K06417	-	ko00000	stage VI sporulation protein D
PHMJEDCH_02718	4.08e-306	hemL	5.4.3.8	-	H	ko:K01845	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	ko00000,ko00001,ko00002,ko01000,ko01007	Glutamate-1-semialdehyde aminotransferase
PHMJEDCH_02719	1.7e-234	hemB	4.2.1.24	-	H	ko:K01698	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the ALAD family
PHMJEDCH_02720	4.99e-176	hemD	4.2.1.75	-	H	ko:K01719	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	ko00000,ko00001,ko00002,ko01000	Uroporphyrinogen-III synthase
PHMJEDCH_02721	6.05e-222	hemC	2.5.1.61	-	H	ko:K01749	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	ko00000,ko00001,ko00002,ko01000	Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps
PHMJEDCH_02722	6.56e-187	hemX	-	-	O	ko:K02497	-	ko00000	cytochrome C
PHMJEDCH_02723	2.79e-311	hemA	1.2.1.70	-	H	ko:K02492	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
PHMJEDCH_02724	3.63e-110	ysxD	-	-	-	-	-	-	-
PHMJEDCH_02725	8.88e-138	engB	-	-	D	ko:K03978	-	ko00000,ko03036	Necessary for normal cell division and for the maintenance of normal septation
PHMJEDCH_02726	0.0	lon	3.4.21.53	-	O	ko:K01338	ko04112,map04112	ko00000,ko00001,ko01000,ko01002	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
PHMJEDCH_02727	0.0	lonB	3.4.21.53	-	LO	ko:K04076	-	ko00000,ko01000,ko01002	Belongs to the peptidase S16 family
PHMJEDCH_02728	2.7e-295	clpX	-	-	O	ko:K03544	ko04112,map04112	ko00000,ko00001,ko03110	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
PHMJEDCH_02729	1.21e-284	tig	-	-	D	ko:K03545	-	ko00000	Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
PHMJEDCH_02730	6.44e-239	ysoA	-	-	H	-	-	-	Tetratricopeptide repeat
PHMJEDCH_02731	1.04e-147	leuD	4.2.1.33, 4.2.1.35	-	E	ko:K01704	ko00290,ko00660,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map01100,map01110,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
PHMJEDCH_02732	0.0	leuC	4.2.1.33, 4.2.1.35	-	E	ko:K01703	ko00290,ko00660,ko00966,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map00966,map01100,map01110,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
PHMJEDCH_02733	2.66e-249	leuB	1.1.1.85	-	CE	ko:K00052	ko00290,ko00660,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map01100,map01110,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate
PHMJEDCH_02734	0.0	leuA	2.3.3.13	-	E	ko:K01649	ko00290,ko00620,ko01100,ko01110,ko01210,ko01230,map00290,map00620,map01100,map01110,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
PHMJEDCH_02735	6.75e-245	ilvC	1.1.1.86	-	EH	ko:K00053	ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
PHMJEDCH_02736	1.45e-109	ilvN	2.2.1.6	-	E	ko:K01653,ko:K16785	ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,ko02010,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Acetolactate synthase
PHMJEDCH_02737	0.0	ilvB	2.2.1.6	-	E	ko:K01652,ko:K16787	ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,ko02010,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Acetolactate synthase
PHMJEDCH_02742	8.81e-110	ysnB	-	-	S	ko:K07095	-	ko00000	Phosphoesterase
PHMJEDCH_02743	3.07e-129	rdgB	3.6.1.66	-	F	ko:K02428	ko00230,map00230	ko00000,ko00001,ko01000	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
PHMJEDCH_02744	2.38e-169	rph	2.7.7.56	-	J	ko:K00989	-	ko00000,ko01000,ko03016	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
PHMJEDCH_02745	1.05e-253	gerM	-	-	S	ko:K06298	-	ko00000	COG5401 Spore germination protein
PHMJEDCH_02746	1.29e-193	murI	3.6.1.66, 5.1.1.3	-	M	ko:K01776,ko:K02428	ko00230,ko00471,ko01100,map00230,map00471,map01100	ko00000,ko00001,ko01000,ko01011	Provides the (R)-glutamate required for cell wall biosynthesis
PHMJEDCH_02747	7.32e-95	ysmB	-	-	K	-	-	-	helix_turn_helix multiple antibiotic resistance protein
PHMJEDCH_02748	6.32e-42	gerE	-	-	K	ko:K01994	-	ko00000,ko03000	Transcriptional regulator
PHMJEDCH_02749	8.26e-96	ysmA	-	-	S	ko:K07107	-	ko00000,ko01000	thioesterase
PHMJEDCH_02750	1.77e-188	sdhB	1.3.5.1, 1.3.5.4	-	C	ko:K00240	ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	succinate dehydrogenase
PHMJEDCH_02751	0.0	sdhA	1.3.5.1, 1.3.5.4	-	C	ko:K00239	ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko05134,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map05134	ko00000,ko00001,ko00002,ko01000	succinate dehydrogenase
PHMJEDCH_02752	2.73e-140	sdhC	-	-	C	ko:K00241	ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002	succinate dehydrogenase
PHMJEDCH_02753	9.97e-103	yslB	-	-	S	-	-	-	Protein of unknown function (DUF2507)
PHMJEDCH_02754	9.22e-270	lysC	2.7.2.4	-	E	ko:K00928	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the aspartokinase family
PHMJEDCH_02755	0.0	uvrC	-	-	L	ko:K03703	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
PHMJEDCH_02756	1.6e-69	trxA	-	-	O	ko:K03671	ko04621,ko05418,map04621,map05418	ko00000,ko00001,ko03110	Belongs to the thioredoxin family
PHMJEDCH_02757	0.0	xsa	3.2.1.55	GH51	G	ko:K01209	ko00520,map00520	ko00000,ko00001,ko01000	Alpha-L-arabinofuranosidase C-terminus
PHMJEDCH_02758	4.79e-225	etfA	-	-	C	ko:K03522	-	ko00000,ko04147	Electron transfer flavoprotein
PHMJEDCH_02759	5.83e-176	etfB	-	-	C	ko:K03521	-	ko00000	Electron transfer flavoprotein
PHMJEDCH_02760	7.29e-171	fadB	4.2.1.17	-	I	ko:K13767	ko00071,ko00362,ko01100,ko01120,ko01212,map00071,map00362,map01100,map01120,map01212	ko00000,ko00001,ko00002,ko01000	Belongs to the enoyl-CoA hydratase isomerase family
PHMJEDCH_02761	1.78e-133	fadR	-	-	K	ko:K13770	-	ko00000,ko03000	Transcriptional regulator
PHMJEDCH_02762	0.0	lcfA	6.2.1.3	-	IQ	ko:K01897	ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920	ko00000,ko00001,ko00002,ko01000,ko01004,ko04147	COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II
PHMJEDCH_02763	7.35e-104	ywbB	-	-	S	-	-	-	Protein of unknown function (DUF2711)
PHMJEDCH_02764	3.09e-88	yshE	-	-	S	ko:K08989	-	ko00000	membrane
PHMJEDCH_02765	0.0	mutS2	-	-	L	ko:K07456	ko03430,map03430	ko00000,ko00001,ko03400	Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
PHMJEDCH_02766	0.0	polX	-	-	L	ko:K02347	-	ko00000,ko03400	COG1796 DNA polymerase IV (family X)
PHMJEDCH_02767	2.02e-107	yshB	-	-	S	-	-	-	membrane protein, required for colicin V production
PHMJEDCH_02768	4.23e-54	zapA	-	-	D	ko:K09888	-	ko00000,ko03036	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
PHMJEDCH_02769	1.64e-210	rnhC	3.1.26.4	-	L	ko:K03471	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PHMJEDCH_02770	0.0	pheT	6.1.1.20	-	J	ko:K01890	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PHMJEDCH_02771	1.27e-248	pheS	6.1.1.20	-	J	ko:K01889	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
PHMJEDCH_02772	1.94e-165	spoU	-	-	J	ko:K03437	-	ko00000,ko03016	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PHMJEDCH_02773	8.83e-43	sspI	-	-	S	ko:K06426	-	ko00000	Belongs to the SspI family
PHMJEDCH_02774	5.97e-244	cdaR_1	-	-	KT	ko:K02647	-	ko00000,ko03000	regulator
PHMJEDCH_02775	0.0	-	1.1.3.15	-	C	ko:K00104	ko00630,ko01100,ko01110,ko01120,ko01130,map00630,map01100,map01110,map01120,map01130	ko00000,ko00001,ko01000	FAD binding domain
PHMJEDCH_02776	6.09e-310	glcF	-	-	C	ko:K11473	ko00630,ko01100,ko01110,ko01120,ko01130,map00630,map01100,map01110,map01120,map01130	ko00000,ko00001	Glycolate oxidase
PHMJEDCH_02777	0.0	cstA	-	-	T	ko:K06200	-	ko00000	Carbon starvation protein
PHMJEDCH_02778	0.0	abfA	3.2.1.55	GH51	G	ko:K01209	ko00520,map00520	ko00000,ko00001,ko01000	alpha-L-arabinofuranosidase activity
PHMJEDCH_02779	1.27e-186	araQ	-	-	G	ko:K17236	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	transport system permease
PHMJEDCH_02780	8.11e-211	araP	-	-	P	ko:K10189,ko:K10241,ko:K17235	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	PFAM binding-protein-dependent transport systems inner membrane component
PHMJEDCH_02781	2.69e-312	araN	-	-	G	ko:K17234	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	carbohydrate transport
PHMJEDCH_02782	2.36e-269	araM	1.1.1.261	-	I	ko:K00096	ko00564,map00564	ko00000,ko00001,ko01000	Catalyzes the NAD(P)H-dependent reduction of dihydroxyacetonephosphate (DHAP or glycerone phosphate) to glycerol 1-phosphate (G1P). The G1P thus generated is probably used for the synthesis of phosphoglycerolipids in Gram-positive bacterial species
PHMJEDCH_02783	1.33e-175	araL	-	-	G	ko:K02101	-	ko00000	Haloacid dehalogenase-like hydrolase
PHMJEDCH_02784	2.82e-169	araD	5.1.3.4	-	G	ko:K03077	ko00040,ko00053,ko01100,ko01120,map00040,map00053,map01100,map01120	ko00000,ko00001,ko00002,ko01000	COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases
PHMJEDCH_02785	0.0	araB	2.7.1.16	-	C	ko:K00853	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko01000	Belongs to the ribulokinase family
PHMJEDCH_02786	0.0	araA	5.3.1.4	-	G	ko:K01804	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko01000	Catalyzes the conversion of L-arabinose to L-ribulose
PHMJEDCH_02787	4.34e-235	abnA	3.2.1.99	GH43	G	ko:K06113	-	ko00000,ko01000	Belongs to the glycosyl hydrolase 43 family
PHMJEDCH_02788	1.25e-261	ysdC	-	-	G	-	-	-	COG1363 Cellulase M and related proteins
PHMJEDCH_02789	4.11e-82	ysdB	-	-	S	-	-	-	Sigma-w pathway protein YsdB
PHMJEDCH_02790	1.7e-50	ysdA	-	-	S	-	-	-	Membrane
PHMJEDCH_02791	3.26e-76	rplT	-	-	J	ko:K02887	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
PHMJEDCH_02792	1.95e-37	rpmI	-	-	J	ko:K02916	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL35 family
PHMJEDCH_02793	1.81e-111	infC	-	-	J	ko:K02520	-	ko00000,ko03012,ko03029	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
PHMJEDCH_02794	1.21e-144	lrgB	-	-	M	ko:K05339	ko02020,map02020	ko00000,ko00001	Inhibits the expression or activity of extracellular murein hydrolases by interacting, possibly with LrgA, with the holin-like protein CidA. The LrgAB and CidA proteins may affect the proton motive force of the membrane. May be involved in programmed cell death (PCD), possibly triggering PCD in response to antibiotics and environmental stresses
PHMJEDCH_02795	3.04e-64	-	-	-	S	ko:K05338	ko02020,map02020	ko00000,ko00001,ko02000	effector of murein hydrolase LrgA
PHMJEDCH_02796	8.26e-165	lytT	-	-	T	ko:K07705	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	COG3279 Response regulator of the LytR AlgR family
PHMJEDCH_02797	0.0	lytS	2.7.13.3	-	T	ko:K07704	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
PHMJEDCH_02798	2.22e-188	ysaA	3.1.3.5, 3.8.1.2	-	S	ko:K01560,ko:K07025,ko:K08723	ko00230,ko00240,ko00361,ko00625,ko00760,ko01100,ko01110,ko01120,map00230,map00240,map00361,map00625,map00760,map01100,map01110,map01120	ko00000,ko00001,ko01000	HAD-hyrolase-like
PHMJEDCH_02799	0.0	thrS	6.1.1.3	-	J	ko:K01868	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
PHMJEDCH_02800	6.12e-192	ytxC	-	-	S	-	-	-	YtxC-like family
PHMJEDCH_02801	1.43e-136	ytxB	-	-	S	-	-	-	SNARE associated Golgi protein
PHMJEDCH_02802	2.64e-215	dnaI	-	-	L	ko:K11144	-	ko00000,ko03032	Primosomal protein DnaI
PHMJEDCH_02803	0.0	dnaB	-	-	L	ko:K03346	-	ko00000,ko03032	Membrane attachment protein
PHMJEDCH_02804	5.95e-106	nrdR	-	-	K	ko:K07738	-	ko00000,ko03000	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
PHMJEDCH_02805	1.82e-88	speH	4.1.1.50	-	E	ko:K01611	ko00270,ko00330,ko01100,map00270,map00330,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
PHMJEDCH_02806	4.24e-247	gapB	1.2.1.12	-	G	ko:K00134	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
PHMJEDCH_02807	7.74e-86	ytcD	-	-	K	-	-	-	Transcriptional regulator
PHMJEDCH_02808	3.31e-251	ytbD	-	-	EGP	ko:K19577	-	ko00000,ko02000	-transporter
PHMJEDCH_02809	4.68e-198	ytbE	-	-	S	-	-	-	reductase
PHMJEDCH_02810	3.15e-123	coaE	2.7.1.24	-	F	ko:K00859	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
PHMJEDCH_02811	4.52e-135	ytaF	-	-	P	-	-	-	Probably functions as a manganese efflux pump
PHMJEDCH_02812	2.14e-197	fpg	3.2.2.23, 4.2.99.18	-	L	ko:K10563	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
PHMJEDCH_02813	0.0	polA	2.7.7.7	-	L	ko:K02335	ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440	ko00000,ko00001,ko01000,ko03032,ko03400	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
PHMJEDCH_02814	0.0	phoR	2.7.13.3	-	T	ko:K07636	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Signal transduction histidine kinase
PHMJEDCH_02815	2.29e-164	phoP	-	-	T	ko:K07658	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PHMJEDCH_02816	3.62e-218	mdh	1.1.1.27, 1.1.1.37	-	C	ko:K00016,ko:K00024	ko00010,ko00020,ko00270,ko00620,ko00630,ko00640,ko00680,ko00710,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko04922,map00010,map00020,map00270,map00620,map00630,map00640,map00680,map00710,map00720,map01100,map01110,map01120,map01130,map01200,map04922	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the reversible oxidation of malate to oxaloacetate
PHMJEDCH_02817	1.54e-307	icd	1.1.1.42	-	C	ko:K00031	ko00020,ko00480,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,ko04146,map00020,map00480,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230,map04146	br01601,ko00000,ko00001,ko00002,ko01000	isocitrate
PHMJEDCH_02818	8.21e-268	citZ	2.3.3.1	-	C	ko:K01647	ko00020,ko00630,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map01100,map01110,map01120,map01130,map01200,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Belongs to the citrate synthase family
PHMJEDCH_02819	1.14e-95	ytwI	-	-	S	-	-	-	membrane
PHMJEDCH_02820	8.18e-247	ytvI	-	-	S	-	-	-	sporulation integral membrane protein YtvI
PHMJEDCH_02821	1.34e-81	fxsA	-	-	S	ko:K07113	-	ko00000	COG3030 Protein affecting phage T7 exclusion by the F plasmid
PHMJEDCH_02822	0.0	pyk	2.7.1.40	-	G	ko:K00873	ko00010,ko00230,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko04930,ko05165,ko05203,ko05230,map00010,map00230,map00620,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map04930,map05165,map05203,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Belongs to the pyruvate kinase family
PHMJEDCH_02823	1.33e-228	pfkA	2.7.1.11	-	F	ko:K00850	ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04152,ko05230,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04152,map05230	ko00000,ko00001,ko00002,ko01000,ko01009,ko03019	Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
PHMJEDCH_02824	3.28e-232	accA	2.1.3.15, 6.4.1.2	-	I	ko:K01962	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002,ko01000	Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA
PHMJEDCH_02825	2.08e-206	accD	2.1.3.15, 6.4.1.2	-	I	ko:K01963	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002,ko01000	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
PHMJEDCH_02826	1.92e-283	ytsJ	1.1.1.38	-	C	ko:K00027	ko00620,ko01200,ko02020,map00620,map01200,map02020	ko00000,ko00001,ko01000	Malate dehydrogenase
PHMJEDCH_02827	0.0	dnaE	2.7.7.7	-	L	ko:K02337	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase
PHMJEDCH_02828	1.12e-71	ytrH	-	-	S	-	-	-	Sporulation protein YtrH
PHMJEDCH_02829	3.08e-113	ytrI	-	-	-	-	-	-	-
PHMJEDCH_02830	1.17e-30	-	-	-	-	-	-	-	-
PHMJEDCH_02831	7.37e-223	nrnA	3.1.13.3, 3.1.3.7	-	S	ko:K06881	ko00920,ko01100,ko01120,map00920,map01100,map01120	ko00000,ko00001,ko01000,ko03400	COG0618 Exopolyphosphatase-related proteins
PHMJEDCH_02832	3.44e-60	ytpI	-	-	S	-	-	-	YtpI-like protein
PHMJEDCH_02833	3.87e-303	ytoI	-	-	K	-	-	-	transcriptional regulator containing CBS domains
PHMJEDCH_02834	2.31e-163	ytkL	-	-	S	-	-	-	Belongs to the UPF0173 family
PHMJEDCH_02835	1.33e-180	ytkK	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PHMJEDCH_02837	0.0	argH	4.3.2.1	-	E	ko:K01755	ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,map00220,map00250,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	argininosuccinate lyase
PHMJEDCH_02838	8.67e-297	argG	6.3.4.5	-	E	ko:K01940	ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,ko05418,map00220,map00250,map01100,map01110,map01130,map01230,map05418	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the argininosuccinate synthase family. Type 1 subfamily
PHMJEDCH_02839	1.64e-114	moaB	2.7.7.75	-	H	ko:K03638	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko01000	May be involved in the biosynthesis of molybdopterin
PHMJEDCH_02840	2.6e-278	ackA	2.7.2.1	-	F	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PHMJEDCH_02841	4.08e-223	ytxK	2.1.1.72	-	L	ko:K00571	-	ko00000,ko01000,ko02048	DNA methylase
PHMJEDCH_02842	1.12e-115	tpx	1.11.1.15	-	O	ko:K11065	-	ko00000,ko01000	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
PHMJEDCH_02843	1.37e-99	ytfJ	-	-	S	-	-	-	Sporulation protein YtfJ
PHMJEDCH_02844	3.61e-147	ytfI	-	-	S	-	-	-	Protein of unknown function (DUF2953)
PHMJEDCH_02845	1.31e-103	yteJ	-	-	S	-	-	-	RDD family
PHMJEDCH_02846	1.88e-227	sppA	-	-	OU	ko:K04773	-	ko00000,ko01000,ko01002	signal peptide peptidase SppA
PHMJEDCH_02847	1.23e-191	nadK2	2.7.1.23	-	G	ko:K00858	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
PHMJEDCH_02848	0.0	ytcJ	-	-	S	-	-	-	amidohydrolase
PHMJEDCH_02849	0.0	ytcI	6.2.1.1	-	I	ko:K01895	ko00010,ko00620,ko00640,ko00680,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00620,map00640,map00680,map00720,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000,ko01004	COG0365 Acyl-coenzyme A synthetases AMP-(fatty) acid ligases
PHMJEDCH_02850	4.15e-42	sspB	-	-	S	ko:K06418,ko:K06419	-	ko00000	spore protein
PHMJEDCH_02851	1.06e-280	thiI	2.8.1.4	-	H	ko:K03151	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko03016	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
PHMJEDCH_02852	3.99e-259	iscS2	2.8.1.7	-	E	ko:K04487	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko02048,ko03016,ko03029	Cysteine desulfurase
PHMJEDCH_02853	4.41e-305	braB	-	-	E	ko:K03311	-	ko00000	Component of the transport system for branched-chain amino acids
PHMJEDCH_02854	0.0	ezrA	-	-	D	ko:K06286	-	ko00000,ko03036	modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
PHMJEDCH_02855	3.79e-183	hisK	3.1.3.15	-	E	ko:K04486	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	COG1387 Histidinol phosphatase and related hydrolases of the PHP family
PHMJEDCH_02856	2.22e-137	yttP	-	-	K	-	-	-	Transcriptional regulator
PHMJEDCH_02857	2.38e-109	ytsP	1.8.4.14	-	T	ko:K08968	ko00270,map00270	ko00000,ko00001,ko01000	GAF domain-containing protein
PHMJEDCH_02858	0.0	ytrP	-	-	T	-	-	-	COG2199 FOG GGDEF domain
PHMJEDCH_02859	5.75e-141	rpsD	-	-	J	ko:K02986	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
PHMJEDCH_02860	2.12e-273	hmp	1.14.12.17, 1.18.1.3	-	C	ko:K05916,ko:K15765	ko00623,ko00920,ko01100,ko01120,ko01220,ko05132,map00623,map00920,map01100,map01120,map01220,map05132	ko00000,ko00001,ko00002,ko01000	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
PHMJEDCH_02863	0.000125	yfkM	3.5.1.124	-	S	ko:K05520	-	ko00000,ko01000,ko01002	protease
PHMJEDCH_02865	1.52e-161	-	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase family
PHMJEDCH_02866	6.5e-189	-	-	-	P	-	-	-	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
PHMJEDCH_02867	1.06e-188	-	-	-	K	-	-	-	Transcriptional regulator
PHMJEDCH_02868	7.21e-154	ygaZ	-	-	E	-	-	-	AzlC protein
PHMJEDCH_02869	7.23e-63	azlD	-	-	S	-	-	-	Branched-chain amino acid transport protein (AzlD)
PHMJEDCH_02870	1.41e-302	tyrS	6.1.1.1	-	J	ko:K01866	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
PHMJEDCH_02871	0.0	acsA	6.2.1.1	-	I	ko:K01895	ko00010,ko00620,ko00640,ko00680,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00620,map00640,map00680,map00720,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000,ko01004	COG0365 Acyl-coenzyme A synthetases AMP-(fatty) acid ligases
PHMJEDCH_02872	3.32e-154	acuA	-	-	K	ko:K04766	-	ko00000,ko01000	Part of the acuABC operon, which is possibly involved in the breakdown of acetoin and butanediol. Acts as an acetyltransferase inactivating acetyl-CoA synthetase AcsA via acetylation at a Lys residue
PHMJEDCH_02873	1.67e-138	acuB	-	-	S	ko:K04767	-	ko00000	Domain in cystathionine beta-synthase and other proteins.
PHMJEDCH_02874	8.46e-285	acuC	-	-	BQ	ko:K04768	-	ko00000	histone deacetylase
PHMJEDCH_02875	2.17e-126	ytxE	-	-	N	ko:K02557	ko02030,ko02040,map02030,map02040	ko00000,ko00001,ko02000,ko02035	Flagellar motor protein
PHMJEDCH_02876	2.47e-184	motP	-	-	N	ko:K02556	ko02020,ko02030,ko02040,map02020,map02030,map02040	ko00000,ko00001,ko02000,ko02035	flagellar motor
PHMJEDCH_02877	7.72e-231	ccpA	-	-	K	ko:K02529	-	ko00000,ko03000	catabolite control protein A
PHMJEDCH_02878	1.8e-248	aroA	2.5.1.54, 5.4.99.5	-	E	ko:K03856,ko:K13853	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of 3-deoxy-D-aribino-hept-2-ulosonate 7-phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate and the formation of prephenate from chorismate
PHMJEDCH_02879	8.39e-58	ytxJ	-	-	O	-	-	-	Protein of unknown function (DUF2847)
PHMJEDCH_02880	1.83e-30	ytxH	-	-	S	-	-	-	COG4980 Gas vesicle protein
PHMJEDCH_02881	2.16e-25	ytxG	-	-	S	-	-	-	protein containing a divergent version of the methyl-accepting chemotaxis-like domain
PHMJEDCH_02882	0.0	murC	6.3.2.8	-	M	ko:K01924	ko00471,ko00550,ko01100,map00471,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Belongs to the MurCDEF family
PHMJEDCH_02883	0.0	sftA	-	-	D	ko:K03466	-	ko00000,ko03036	Belongs to the FtsK SpoIIIE SftA family
PHMJEDCH_02884	1.15e-136	ytpR	-	-	J	ko:K06878	-	ko00000	Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PHMJEDCH_02885	1.1e-186	ytpQ	-	-	S	-	-	-	Belongs to the UPF0354 family
PHMJEDCH_02886	2.23e-75	ytpP	-	-	CO	-	-	-	Thioredoxin
PHMJEDCH_02887	9.21e-99	ytoQ	-	-	S	-	-	-	Nucleoside 2-deoxyribosyltransferase YtoQ
PHMJEDCH_02888	8.38e-258	pepA	3.4.11.7	-	G	ko:K01261,ko:K01269	-	ko00000,ko01000,ko01002	COG1363 Cellulase M and related proteins
PHMJEDCH_02889	9.96e-69	ytzB	-	-	S	-	-	-	small secreted protein
PHMJEDCH_02890	0.0	malS	1.1.1.38	-	C	ko:K00027	ko00620,ko01200,ko02020,map00620,map01200,map02020	ko00000,ko00001,ko01000	Malate dehydrogenase
PHMJEDCH_02891	1.41e-204	ytnP	-	-	S	-	-	-	COG0491 Zn-dependent hydrolases, including glyoxylases
PHMJEDCH_02892	4.34e-158	trmB	2.1.1.33	-	J	ko:K03439	-	ko00000,ko01000,ko03016	Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
PHMJEDCH_02893	4.54e-59	ytzH	-	-	S	-	-	-	YtzH-like protein
PHMJEDCH_02894	3.42e-198	ytmP	-	-	M	-	-	-	Phosphotransferase
PHMJEDCH_02895	1.86e-214	ytlR	-	-	I	-	-	-	Diacylglycerol kinase catalytic domain
PHMJEDCH_02896	2.99e-200	ytlQ	-	-	-	-	-	-	-
PHMJEDCH_02897	2.04e-128	ytlP	3.1.4.58	-	J	ko:K01975	-	ko00000,ko01000,ko03016	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
PHMJEDCH_02898	4.05e-214	ytkP	2.5.1.47	-	E	ko:K01738	ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the cysteine synthase cystathionine beta- synthase family
PHMJEDCH_02899	0.0	ytjP	3.5.1.18	-	E	ko:K01439	ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Dipeptidase
PHMJEDCH_02900	3.89e-286	pbuO	-	-	S	ko:K06901	-	ko00000,ko02000	permease
PHMJEDCH_02901	1.21e-251	ythQ	-	-	U	ko:K01992	-	ko00000,ko00002,ko02000	Bacterial ABC transporter protein EcsB
PHMJEDCH_02902	1.92e-149	ythP	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter
PHMJEDCH_02903	4.46e-46	ytzE	-	-	K	-	-	-	COG1349 Transcriptional regulators of sugar metabolism
PHMJEDCH_02904	4.25e-160	rsuA	5.4.99.19	-	J	ko:K06183	-	ko00000,ko01000,ko03009	Belongs to the pseudouridine synthase RsuA family
PHMJEDCH_02905	0.0	ytgP	-	-	S	ko:K03328	-	ko00000	COG2244 Membrane protein involved in the export of O-antigen and teichoic acid
PHMJEDCH_02906	2.31e-293	ytfP	-	-	S	ko:K07007	-	ko00000	HI0933-like protein
PHMJEDCH_02907	0.0	opuD	-	-	M	ko:K05020	-	ko00000,ko02000	Belongs to the BCCT transporter (TC 2.A.15) family
PHMJEDCH_02908	3.57e-35	yteV	-	-	S	-	-	-	Sporulation protein Cse60
PHMJEDCH_02909	3.97e-232	msmR	-	-	K	ko:K02529	-	ko00000,ko03000	Transcriptional regulator
PHMJEDCH_02910	3.41e-296	msmE	-	-	G	ko:K10117	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding protein
PHMJEDCH_02911	6.99e-212	-	-	-	G	ko:K10118	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PHMJEDCH_02912	1.37e-182	amyC	-	-	P	ko:K10119	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter (permease)
PHMJEDCH_02913	2.49e-313	melA	3.2.1.22	-	G	ko:K07406	ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603	ko00000,ko00001,ko01000	Family 4 glycosyl hydrolase
PHMJEDCH_02914	6.31e-96	-	-	-	M	-	-	-	Acetyltransferase (GNAT) domain
PHMJEDCH_02915	8.6e-69	ytwF	-	-	P	-	-	-	Sulfurtransferase
PHMJEDCH_02916	0.0	leuS	6.1.1.4	-	J	ko:K01869	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Belongs to the class-I aminoacyl-tRNA synthetase family
PHMJEDCH_02917	7.19e-69	ytvB	-	-	S	-	-	-	Protein of unknown function (DUF4257)
PHMJEDCH_02918	1.79e-172	pfyP	-	-	T	-	-	-	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
PHMJEDCH_02919	2.16e-265	yttB	-	-	EGP	-	-	-	Major facilitator superfamily
PHMJEDCH_02920	1.46e-151	ywaF	-	-	S	-	-	-	Integral membrane protein
PHMJEDCH_02921	0.0	bceB	-	-	V	ko:K02004,ko:K11632,ko:K19080	ko01503,ko02010,ko02020,ko05150,map01503,map02010,map02020,map05150	ko00000,ko00001,ko00002,ko01504,ko02000	ABC transporter (permease)
PHMJEDCH_02922	7.67e-171	bceA	-	-	V	ko:K02003,ko:K11631,ko:K19079	ko01503,ko02010,ko02020,ko05150,map01503,map02010,map02020,map05150	ko00000,ko00001,ko00002,ko01504,ko02000	ABC transporter, ATP-binding protein
PHMJEDCH_02923	2.32e-216	bceS	2.7.13.3	-	T	ko:K11629,ko:K19077	ko01503,ko02020,map01503,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko01504,ko02022	His Kinase A (phosphoacceptor) domain
PHMJEDCH_02924	4.27e-156	graR	-	-	T	ko:K11630,ko:K19078	ko01503,ko02020,map01503,map02020	ko00000,ko00001,ko00002,ko01504,ko02022	COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PHMJEDCH_02925	3.54e-258	ytrF	-	-	V	ko:K02004,ko:K16918	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG0577 ABC-type antimicrobial peptide transport system, permease component
PHMJEDCH_02926	7.08e-160	ytrE	-	-	V	ko:K16920	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter, ATP-binding protein
PHMJEDCH_02927	1.47e-190	-	-	-	-	ko:K16919	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	-
PHMJEDCH_02928	2.63e-203	-	-	-	P	ko:K16919	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC-2 family transporter protein
PHMJEDCH_02929	2.23e-215	ytrC	-	-	S	ko:K16919	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC-2 family transporter protein
PHMJEDCH_02930	6.5e-145	ytrB	-	-	P	ko:K16921	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter, ATP-binding protein
PHMJEDCH_02931	8.7e-35	ytrB	-	-	P	ko:K16921	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter, ATP-binding protein
PHMJEDCH_02932	3.66e-85	ytrA	-	-	K	ko:K07979	-	ko00000,ko03000	GntR family transcriptional regulator
PHMJEDCH_02934	2.89e-52	ytzC	-	-	S	-	-	-	Protein of unknown function (DUF2524)
PHMJEDCH_02935	6.73e-244	ytqA	-	-	S	ko:K07139	-	ko00000	Fe-S oxidoreductase
PHMJEDCH_02936	4.07e-133	ytqB	-	-	J	-	-	-	Putative rRNA methylase
PHMJEDCH_02938	2.17e-266	ytpB	4.2.3.130	-	S	ko:K16188	-	ko00000,ko01000	Tetraprenyl-beta-curcumene synthase
PHMJEDCH_02939	6.67e-192	ytpA	3.1.1.5	-	I	ko:K01048	ko00564,map00564	ko00000,ko00001,ko01000	Alpha beta hydrolase
PHMJEDCH_02940	7.46e-80	ytoA	-	-	S	-	-	-	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
PHMJEDCH_02941	0.0	ytnA	-	-	E	ko:K03293	-	ko00000	COG1113 Gamma-aminobutyrate permease and related permeases
PHMJEDCH_02942	0.0	asnB	6.3.5.4	-	E	ko:K01953	ko00250,ko01100,ko01110,map00250,map01100,map01110	ko00000,ko00001,ko01000,ko01002	Asparagine synthase
PHMJEDCH_02943	7.88e-287	metK	2.5.1.6	-	H	ko:K00789	ko00270,ko01100,ko01110,ko01230,map00270,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
PHMJEDCH_02944	0.0	pckA	4.1.1.49	-	C	ko:K01610	ko00010,ko00020,ko00620,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00710,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
PHMJEDCH_02945	1.65e-51	ytmB	-	-	S	-	-	-	Protein of unknown function (DUF2584)
PHMJEDCH_02946	6.15e-187	ytmA	-	-	E	-	-	-	COG1506 Dipeptidyl aminopeptidases acylaminoacyl-peptidases
PHMJEDCH_02947	6.07e-228	ytlA	-	-	P	ko:K02051	-	ko00000,ko00002,ko02000	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems, periplasmic components
PHMJEDCH_02948	1.38e-180	ytlC	3.6.3.36	-	P	ko:K02049,ko:K10831,ko:K15555	ko00920,ko02010,map00920,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter
PHMJEDCH_02949	3.42e-170	ytlD	-	-	P	ko:K02050	-	ko00000,ko00002,ko02000	COG0600 ABC-type nitrate sulfonate bicarbonate transport system, permease component
PHMJEDCH_02950	5.86e-114	ytkD	3.6.1.55	-	L	ko:K03574	-	ko00000,ko01000,ko03400	Belongs to the Nudix hydrolase family
PHMJEDCH_02951	1.67e-77	ytkC	-	-	S	-	-	-	Bacteriophage holin family
PHMJEDCH_02952	3e-98	dps	-	-	P	ko:K04047	-	ko00000,ko03036	Belongs to the Dps family
PHMJEDCH_02954	9.99e-98	ytkA	-	-	S	-	-	-	YtkA-like
PHMJEDCH_02955	5.89e-113	luxS	4.4.1.21	-	T	ko:K07173	ko00270,ko01100,ko01230,ko02024,ko02026,ko05111,map00270,map01100,map01230,map02024,map02026,map05111	ko00000,ko00001,ko00002,ko01000	Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
PHMJEDCH_02956	5.71e-52	ytjA	-	-	S	ko:K08998	-	ko00000	Could be involved in insertion of integral membrane proteins into the membrane
PHMJEDCH_02957	4.26e-133	ytiB	4.2.1.1	-	P	ko:K01673	ko00910,map00910	ko00000,ko00001,ko01000	Reversible hydration of carbon dioxide
PHMJEDCH_02958	7.13e-56	rpmE2	-	-	J	ko:K02909	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L31
PHMJEDCH_02959	6.36e-313	ythA	1.10.3.14	-	C	ko:K00425	ko00190,ko01100,ko02020,map00190,map01100,map02020	ko00000,ko00001,ko00002,ko01000	oxidase, subunit
PHMJEDCH_02960	9.63e-230	ythB	1.10.3.14	-	C	ko:K00426	ko00190,ko01100,ko02020,map00190,map01100,map02020	ko00000,ko00001,ko00002,ko01000	COG1294 Cytochrome bd-type quinol oxidase, subunit 2
PHMJEDCH_02961	3.88e-34	-	-	-	S	-	-	-	Domain of Unknown Function (DUF1540)
PHMJEDCH_02962	4.21e-265	menC	4.2.1.113	-	H	ko:K02549	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB)
PHMJEDCH_02963	0.0	menE	6.2.1.26	-	H	ko:K01911	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Belongs to the ATP-dependent AMP-binding enzyme family. MenE subfamily
PHMJEDCH_02964	7.22e-198	menB	4.1.3.36	-	H	ko:K01661	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
PHMJEDCH_02965	2.39e-188	menH	4.2.99.20	-	S	ko:K08680	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes a proton abstraction reaction that results in 2,5-elimination of pyruvate from 2-succinyl-5-enolpyruvyl-6- hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC) and the formation of 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate (SHCHC)
PHMJEDCH_02966	0.0	menD	2.2.1.9	-	H	ko:K02551	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
PHMJEDCH_02967	0.0	menF	5.4.4.2	-	HQ	ko:K02552	ko00130,ko01053,ko01100,ko01110,ko01130,map00130,map01053,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Isochorismate synthase
PHMJEDCH_02968	8.57e-160	yteA	-	-	T	-	-	-	COG1734 DnaK suppressor protein
PHMJEDCH_02969	5.18e-93	ytaB	-	-	T	ko:K05770	ko04080,ko04214,ko04979,ko05166,map04080,map04214,map04979,map05166	ko00000,ko00001,ko02000	membrane
PHMJEDCH_02991	9.3e-53	-	-	-	S	-	-	-	COG NOG14552 non supervised orthologous group
PHMJEDCH_02992	3.55e-118	thiT	-	-	S	ko:K16789	-	ko00000,ko02000	Thiamine transporter protein (Thia_YuaJ)
PHMJEDCH_02993	1.38e-273	yuaG	-	-	S	ko:K07192	ko04910,map04910	ko00000,ko00001,ko03036,ko04131,ko04147	protein conserved in bacteria
PHMJEDCH_02994	7.32e-105	yuaF	-	-	OU	-	-	-	Membrane protein implicated in regulation of membrane protease activity
PHMJEDCH_02995	1.42e-102	yuaE	-	-	S	-	-	-	DinB superfamily
PHMJEDCH_02996	1.21e-134	-	-	-	S	-	-	-	MOSC domain
PHMJEDCH_02997	9.64e-288	gbsB	1.1.1.1	-	C	ko:K11440	ko00260,ko01100,map00260,map01100	ko00000,ko00001,ko00002,ko01000	alcohol dehydrogenase
PHMJEDCH_02998	0.0	gbsA	1.2.1.8	-	C	ko:K00130	ko00260,ko01100,map00260,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the aldehyde dehydrogenase family
PHMJEDCH_02999	9.65e-119	yuaC	-	-	K	ko:K22109	-	ko00000,ko03000	Belongs to the GbsR family
PHMJEDCH_03000	4.6e-119	yuaB	-	-	-	-	-	-	-
PHMJEDCH_03001	1.97e-152	ktrA	-	-	P	ko:K03499	-	ko00000,ko02000	COG0569 K transport systems, NAD-binding component
PHMJEDCH_03002	2.27e-185	-	-	-	NU	-	-	-	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
PHMJEDCH_03003	6.24e-268	hmp	1.14.12.17, 1.18.1.3	-	C	ko:K05916,ko:K15765	ko00623,ko00920,ko01100,ko01120,ko01220,ko05132,map00623,map00920,map01100,map01120,map01220,map05132	ko00000,ko00001,ko00002,ko01000	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
PHMJEDCH_03004	2.36e-47	-	-	-	G	-	-	-	Cupin
PHMJEDCH_03005	2.17e-57	yjcN	-	-	-	-	-	-	-
PHMJEDCH_03008	2.15e-177	-	-	-	S	ko:K06366	ko02024,map02024	ko00000,ko00001,ko01000	Aspartate phosphatase response regulator
PHMJEDCH_03009	7.36e-20	-	-	-	-	-	-	-	-
PHMJEDCH_03014	9.14e-26	-	-	-	K	-	-	-	Cro/C1-type HTH DNA-binding domain
PHMJEDCH_03016	4.3e-54	-	-	-	-	-	-	-	-
PHMJEDCH_03017	1.71e-304	-	-	-	I	-	-	-	Pfam Lipase (class 3)
PHMJEDCH_03018	2.56e-67	-	-	-	S	-	-	-	Protein of unknown function (DUF1433)
PHMJEDCH_03019	2.74e-21	-	-	-	K	-	-	-	Helix-turn-helix domain
PHMJEDCH_03021	2.05e-58	-	-	-	M	-	-	-	D-alanyl-D-alanine carboxypeptidase
PHMJEDCH_03022	1.64e-57	-	-	-	S	-	-	-	Bacteriophage holin family
PHMJEDCH_03025	3.63e-99	-	-	-	S	-	-	-	Domain of unknown function (DUF2479)
PHMJEDCH_03026	0.0	-	-	-	M	-	-	-	Pectate lyase superfamily protein
PHMJEDCH_03027	4.15e-125	acm2	3.2.1.17	-	NU	ko:K01185	-	ko00000,ko01000	Prophage endopeptidase tail
PHMJEDCH_03029	0.0	-	-	-	D	-	-	-	Phage tail tape measure protein
PHMJEDCH_03034	4.74e-43	-	-	-	S	-	-	-	Bacteriophage HK97-gp10, putative tail-component
PHMJEDCH_03035	1.41e-26	-	-	-	S	-	-	-	Phage head-tail joining protein
PHMJEDCH_03037	6.72e-130	-	-	-	S	-	-	-	capsid protein
PHMJEDCH_03038	2.8e-68	-	-	-	S	ko:K06904	-	ko00000	Caudovirus prohead serine protease
PHMJEDCH_03039	9.64e-183	-	-	-	S	-	-	-	portal protein
PHMJEDCH_03041	9.42e-163	terL	-	-	S	-	-	-	Terminase
PHMJEDCH_03042	4.47e-68	-	-	-	L	-	-	-	Terminase, small subunit
PHMJEDCH_03047	6.63e-10	-	-	-	L	ko:K07451	-	ko00000,ko01000,ko02048	COG1403 Restriction endonuclease
PHMJEDCH_03054	1.69e-65	-	-	-	K	-	-	-	BRO family, N-terminal domain
PHMJEDCH_03060	2.58e-72	-	-	-	L	-	-	-	Arm DNA-binding domain
PHMJEDCH_03062	7.33e-184	uppP	3.6.1.27	-	V	ko:K06153	ko00550,map00550	ko00000,ko00001,ko01000,ko01011	Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
PHMJEDCH_03063	2.73e-248	yubA	-	-	S	-	-	-	transporter activity
PHMJEDCH_03064	4.84e-231	yulF	-	-	S	ko:K22230	ko00562,ko01120,map00562,map01120	ko00000,ko00001,ko01000	Oxidoreductase
PHMJEDCH_03065	4.02e-126	yraA	3.5.1.124	-	S	ko:K05520	-	ko00000,ko01000,ko01002	DJ-1/PfpI family
PHMJEDCH_03066	0.0	mcpB	-	-	NT	ko:K03406	ko02020,ko02030,map02020,map02030	ko00000,ko00001,ko02035	chemotaxis protein
PHMJEDCH_03067	0.0	mcpA	-	-	NT	ko:K03406	ko02020,ko02030,map02020,map02030	ko00000,ko00001,ko02035	chemotaxis protein
PHMJEDCH_03068	0.0	mcpB	-	-	NT	ko:K03406	ko02020,ko02030,map02020,map02030	ko00000,ko00001,ko02035	chemotaxis protein
PHMJEDCH_03069	4.49e-285	mcpB	-	-	NT	ko:K03406	ko02020,ko02030,map02020,map02030	ko00000,ko00001,ko02035	chemotaxis protein
PHMJEDCH_03070	1.68e-174	tgl	2.3.2.13	-	H	ko:K00686	-	ko00000,ko01000	Probably plays a role in the assembly of the spore coat proteins by catalyzing epsilon-(gamma-glutamyl)lysine cross-links
PHMJEDCH_03071	1.82e-52	-	-	-	-	-	-	-	-
PHMJEDCH_03072	5.54e-236	npd	1.13.12.16	-	S	ko:K00459	ko00910,map00910	ko00000,ko00001,ko01000	COG2070 Dioxygenases related to 2-nitropropane dioxygenase
PHMJEDCH_03073	0.0	yugT	3.2.1.10, 3.2.1.20	GH13,GH31	G	ko:K01182,ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	COG0366 Glycosidases
PHMJEDCH_03074	1.82e-293	yugS	-	-	S	-	-	-	COG1253 Hemolysins and related proteins containing CBS domains
PHMJEDCH_03075	1.95e-149	yugP	-	-	S	ko:K06973	-	ko00000	Zn-dependent protease
PHMJEDCH_03076	3.56e-22	-	-	-	-	-	-	-	-
PHMJEDCH_03077	2.98e-36	mstX	-	-	S	-	-	-	Membrane-integrating protein Mistic
PHMJEDCH_03078	8.97e-227	yugO	-	-	P	ko:K10716	-	ko00000,ko02000	COG1226 Kef-type K transport systems
PHMJEDCH_03079	4.57e-90	yugN	-	-	S	-	-	-	YugN-like family
PHMJEDCH_03081	0.0	pgi	5.3.1.9	-	G	ko:K01810	ko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the GPI family
PHMJEDCH_03082	8.85e-288	yugK	-	-	C	ko:K19955	-	ko00000,ko01000	Dehydrogenase
PHMJEDCH_03083	7.5e-283	yugJ	-	-	C	ko:K19955	-	ko00000,ko01000	oxidoreductases, Fe-dependent alcohol dehydrogenase family
PHMJEDCH_03084	1.28e-45	yuzA	-	-	S	ko:K09779	-	ko00000	Domain of unknown function (DUF378)
PHMJEDCH_03085	8.3e-82	yugI	-	-	J	ko:K07570,ko:K07571	-	ko00000	RNA binding protein (contains ribosomal protein S1 domain)
PHMJEDCH_03086	2.28e-264	yugH	-	-	E	ko:K10907	-	ko00000,ko01000,ko01007	Aminotransferase
PHMJEDCH_03087	1.53e-108	alaR	-	-	K	-	-	-	Transcriptional regulator
PHMJEDCH_03088	3.41e-192	yugF	-	-	I	-	-	-	Hydrolase
PHMJEDCH_03089	3.95e-51	yugE	-	-	S	-	-	-	Domain of unknown function (DUF1871)
PHMJEDCH_03090	4.65e-277	patB	4.4.1.8	-	E	ko:K14155	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko01000,ko01007	COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities
PHMJEDCH_03091	8.41e-282	kinB2	2.7.13.3	-	T	ko:K07697	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
PHMJEDCH_03092	4.14e-81	kapB	-	-	G	ko:K06347	ko02020,map02020	ko00000,ko00001	Kinase associated protein B
PHMJEDCH_03093	2.54e-149	kapD	-	-	L	ko:K06348	-	ko00000	the KinA pathway to sporulation
PHMJEDCH_03094	2.6e-240	yuxJ	-	-	EGP	-	-	-	Major facilitator superfamily
PHMJEDCH_03095	0.0	pbpD	2.4.1.129, 3.4.16.4	GT51	M	ko:K12555,ko:K18770	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01003,ko01011	Penicillin-binding Protein
PHMJEDCH_03096	5.95e-92	yuxK	-	-	S	-	-	-	protein conserved in bacteria
PHMJEDCH_03097	2.08e-97	yufK	-	-	S	-	-	-	Family of unknown function (DUF5366)
PHMJEDCH_03098	0.0	malK	2.7.13.3	-	T	ko:K11614,ko:K11637,ko:K11691	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Signal transduction histidine kinase regulating citrate malate metabolism
PHMJEDCH_03099	3.8e-161	dcuR	-	-	T	ko:K02475,ko:K11615	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	COG4565 Response regulator of citrate malate metabolism
PHMJEDCH_03100	7.9e-247	tcsA	-	-	S	ko:K02058,ko:K07335	-	ko00000,ko00002,ko02000	ABC-type transport system, periplasmic component surface lipoprotein
PHMJEDCH_03101	5.71e-275	yufO	3.6.3.17	-	S	ko:K02056	-	ko00000,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
PHMJEDCH_03102	1.68e-232	yufP	-	-	S	ko:K02057	-	ko00000,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
PHMJEDCH_03103	1.71e-215	yufQ	-	-	S	ko:K02057	-	ko00000,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
PHMJEDCH_03105	0.0	mrpA	-	-	CP	ko:K05565	-	ko00000,ko02000	COG1009 NADH ubiquinone oxidoreductase subunit 5 (chain L) Multisubunit Na H antiporter, MnhA subunit
PHMJEDCH_03106	8.6e-88	mrpB	-	-	P	ko:K05566	-	ko00000,ko02000	Subunit B of antiporter complex involved in resistance to high concentrations of Na , K , Li and or alkali
PHMJEDCH_03107	1.42e-65	mrpC	-	-	P	ko:K05567	-	ko00000,ko02000	Subunit C of antiporter complex involved in resistance to high concentrations of Na , K , Li and or alkali
PHMJEDCH_03108	0.0	mrpD	-	-	CP	ko:K05568	-	ko00000,ko02000	Subunit D of antiporter complex involved in resistance to high concentrations of Na , K , Li and or alkali
PHMJEDCH_03109	1.13e-97	mrpE	-	-	P	ko:K05569	-	ko00000,ko02000	Subunit E of antiporter complex involved in resistance to high concentrations of Na , K , Li and or alkali
PHMJEDCH_03110	2.15e-49	mrpF	-	-	P	ko:K05570	-	ko00000,ko02000	Subunit F of antiporter complex involved in resistance to high concentrations of Na , K , Li and or alkali
PHMJEDCH_03111	8.16e-77	mrpG	-	-	P	ko:K05571	-	ko00000,ko02000	COG1320 Multisubunit Na H antiporter, MnhG subunit
PHMJEDCH_03112	3.55e-77	yuxO	-	-	Q	-	-	-	protein, possibly involved in aromatic compounds catabolism
PHMJEDCH_03113	1.9e-146	comA	-	-	K	ko:K07691	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko02022	COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
PHMJEDCH_03114	1.3e-182	comP	2.7.13.3	-	T	ko:K07680	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
PHMJEDCH_03115	2.45e-121	comP	2.7.13.3	-	T	ko:K07680	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
PHMJEDCH_03117	5.91e-78	comQ	-	-	H	ko:K02251	ko02024,map02024	ko00000,ko00001,ko02044	Belongs to the FPP GGPP synthase family
PHMJEDCH_03118	1.87e-11	-	-	-	S	-	-	-	DegQ (SacQ) family
PHMJEDCH_03119	1.59e-62	yuzC	-	-	-	-	-	-	-
PHMJEDCH_03120	1.12e-285	yuxH	-	-	T	-	-	-	signal transduction protein containing EAL and modified HD-GYP domains
PHMJEDCH_03121	0.0	pncB	6.3.4.21	-	H	ko:K00763	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
PHMJEDCH_03122	4.46e-132	pncA	-	-	Q	ko:K16788	-	ko00000,ko02000	COG1335 Amidases related to nicotinamidase
PHMJEDCH_03123	4.96e-86	yueI	-	-	S	-	-	-	Protein of unknown function (DUF1694)
PHMJEDCH_03124	1.1e-50	yueH	-	-	S	-	-	-	YueH-like protein
PHMJEDCH_03125	4.3e-44	yueG	-	-	S	ko:K06299	-	ko00000	Spore germination protein gerPA/gerPF
PHMJEDCH_03126	1.15e-232	yueF	-	-	S	-	-	-	transporter activity
PHMJEDCH_03127	1.98e-31	-	-	-	S	-	-	-	Protein of unknown function (DUF2642)
PHMJEDCH_03128	1.83e-123	yueE	-	-	S	ko:K06950	-	ko00000	phosphohydrolase
PHMJEDCH_03129	2.35e-159	yueD	1.1.1.320	-	IQ	ko:K16216	-	ko00000,ko01000	COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PHMJEDCH_03130	4.27e-97	yueC	-	-	S	-	-	-	Family of unknown function (DUF5383)
PHMJEDCH_03131	0.0	yueB	-	-	S	-	-	-	type VII secretion protein EsaA
PHMJEDCH_03132	0.0	essC	-	-	D	ko:K03466	-	ko00000,ko03036	COG1674 DNA segregation ATPase FtsK SpoIIIE and related proteins
PHMJEDCH_03133	8.65e-255	essB	-	-	S	-	-	-	WXG100 protein secretion system (Wss), protein YukC
PHMJEDCH_03134	5.28e-53	yukD	-	-	S	-	-	-	WXG100 protein secretion system (Wss), protein YukD
PHMJEDCH_03135	1.94e-60	yukE	-	-	S	-	-	-	Belongs to the WXG100 family
PHMJEDCH_03136	4.08e-289	yukF	-	-	QT	-	-	-	Transcriptional regulator
PHMJEDCH_03137	7.76e-259	ald	1.4.1.1	-	E	ko:K00259	ko00250,ko00430,ko01100,map00250,map00430,map01100	ko00000,ko00001,ko01000	Belongs to the AlaDH PNT family
PHMJEDCH_03138	1.24e-161	yukJ	-	-	S	-	-	-	Uncharacterized conserved protein (DUF2278)
PHMJEDCH_03139	3.6e-42	mbtH	-	-	S	ko:K05375	ko00261,ko01130,map00261,map01130	ko00000,ko00001,ko00002	MbtH-like protein
PHMJEDCH_03140	0.0	dhbF	-	-	Q	ko:K04780	ko01053,map01053	ko00000,ko00001,ko01008	Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PHMJEDCH_03141	1.4e-208	dhbB	3.3.2.1, 6.3.2.14	-	Q	ko:K01252	ko01053,ko01110,ko01130,map01053,map01110,map01130	ko00000,ko00001,ko01000,ko01008	Isochorismatase family
PHMJEDCH_03142	0.0	entE	2.7.7.58, 6.3.2.14	-	Q	ko:K02363,ko:K04783	ko01053,ko01110,ko01130,map01053,map01110,map01130	ko00000,ko00001,ko01000,ko01008	2,3-dihydroxybenzoate-AMP ligase
PHMJEDCH_03143	1.74e-273	dhbC	5.4.4.2	-	HQ	ko:K02361	ko00130,ko01053,ko01100,ko01110,ko01130,map00130,map01053,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Isochorismate synthase
PHMJEDCH_03144	5.34e-166	dhbA	1.3.1.28	-	IQ	ko:K00216	ko01053,ko01110,ko01130,map01053,map01110,map01130	ko00000,ko00001,ko01000	Belongs to the short-chain dehydrogenases reductases (SDR) family
PHMJEDCH_03145	1.49e-194	eSD	-	-	S	ko:K07017	-	ko00000	Putative esterase
PHMJEDCH_03146	2.02e-149	yuiH	-	-	S	-	-	-	Oxidoreductase molybdopterin binding domain
PHMJEDCH_03147	4.35e-130	bioY	-	-	S	ko:K03523	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Biotin biosynthesis protein
PHMJEDCH_03148	9.11e-273	yuiF	-	-	S	ko:K07084	-	ko00000,ko02000	antiporter
PHMJEDCH_03149	0.0	pepA	3.4.11.1	-	E	ko:K01255	ko00480,ko01100,map00480,map01100	ko00000,ko00001,ko01000,ko01002	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
PHMJEDCH_03150	1.37e-98	yuiD	-	-	S	ko:K09775	-	ko00000	protein conserved in bacteria
PHMJEDCH_03151	2.23e-149	yuiC	-	-	S	-	-	-	protein conserved in bacteria
PHMJEDCH_03152	1.21e-45	yuiB	-	-	S	-	-	-	Putative membrane protein
PHMJEDCH_03153	3.83e-297	yumB	1.6.99.3	-	C	ko:K03885	ko00190,map00190	ko00000,ko00001,ko01000	NADH dehydrogenase
PHMJEDCH_03154	1.15e-235	yumC	1.18.1.2, 1.19.1.1	-	C	ko:K21567	-	ko00000,ko01000	reductase
PHMJEDCH_03156	1.09e-219	guaC	1.7.1.7	-	F	ko:K00364	ko00230,map00230	ko00000,ko00001,ko01000	Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
PHMJEDCH_03157	1.57e-37	-	-	-	-	-	-	-	-
PHMJEDCH_03158	1.09e-86	-	-	-	CP	-	-	-	Membrane
PHMJEDCH_03159	1.41e-151	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter
PHMJEDCH_03161	5.3e-44	-	-	-	S	-	-	-	Bacteriocin class IId cyclical uberolysin-like
PHMJEDCH_03163	5.08e-55	yjcK	2.3.1.128	-	J	ko:K03790	-	ko00000,ko01000,ko03009	Alanine acetyltransferase
PHMJEDCH_03164	5.14e-168	dltE	-	-	M	ko:K14189	-	ko00000,ko01000	Belongs to the short-chain dehydrogenases reductases (SDR) family
PHMJEDCH_03166	7.35e-46	-	-	-	S	-	-	-	Bacteriophage A118-like holin, Hol118
PHMJEDCH_03167	1.42e-185	-	3.5.1.28	-	MT	ko:K01447	-	ko00000,ko01000	N-acetylmuramoyl-L-alanine amidase
PHMJEDCH_03168	1.66e-39	-	-	-	S	-	-	-	BhlA holin family
PHMJEDCH_03171	2.39e-109	-	-	-	-	-	-	-	-
PHMJEDCH_03172	0.0	-	-	-	S	-	-	-	Peptidase_G2, IMC autoproteolytic cleavage domain
PHMJEDCH_03173	3.65e-93	-	-	-	L	-	-	-	Prophage endopeptidase tail
PHMJEDCH_03174	1.45e-67	acm2	3.2.1.17	-	NU	ko:K01185	-	ko00000,ko01000	Prophage endopeptidase tail
PHMJEDCH_03175	1.09e-151	-	-	-	D	-	-	-	phage tail tape measure protein
PHMJEDCH_03176	1.25e-50	-	-	-	D	-	-	-	phage tail tape measure protein
PHMJEDCH_03178	2.1e-31	-	-	-	-	-	-	-	-
PHMJEDCH_03179	1.33e-60	-	-	-	N	-	-	-	domain, Protein
PHMJEDCH_03180	7.2e-25	-	-	-	-	-	-	-	-
PHMJEDCH_03183	2.62e-34	-	-	-	-	-	-	-	-
PHMJEDCH_03185	2.82e-101	-	-	-	-	-	-	-	-
PHMJEDCH_03186	2.02e-05	-	-	-	-	-	-	-	-
PHMJEDCH_03187	2.52e-102	-	-	-	S	-	-	-	Phage minor capsid protein 2
PHMJEDCH_03188	1.17e-200	-	-	-	-	-	-	-	-
PHMJEDCH_03189	2.32e-37	-	-	-	S	-	-	-	Helix-turn-helix of insertion element transposase
PHMJEDCH_03190	0.0	-	-	-	S	-	-	-	TIGRFAM Phage
PHMJEDCH_03191	3.91e-87	-	-	-	L	-	-	-	Phage integrase family
PHMJEDCH_03194	1.57e-09	-	-	-	-	-	-	-	-
PHMJEDCH_03195	1.03e-16	-	-	-	-	-	-	-	-
PHMJEDCH_03197	5.88e-45	-	-	-	-	-	-	-	-
PHMJEDCH_03209	4.24e-10	-	-	-	-	-	-	-	-
PHMJEDCH_03211	9.37e-06	-	-	-	K	-	-	-	Cro/C1-type HTH DNA-binding domain
PHMJEDCH_03213	2.48e-129	-	-	-	S	-	-	-	Helix-turn-helix domain
PHMJEDCH_03214	5.47e-166	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
PHMJEDCH_03215	1.88e-80	erpA	-	-	S	ko:K13628	-	ko00000,ko03016	Belongs to the HesB IscA family
PHMJEDCH_03216	3.59e-204	dapF	5.1.1.7	-	E	ko:K01778	ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
PHMJEDCH_03217	2.11e-271	yutK	-	-	F	ko:K03317	-	ko00000	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
PHMJEDCH_03218	4.81e-50	yuzB	-	-	S	-	-	-	Belongs to the UPF0349 family
PHMJEDCH_03219	2.72e-262	yutJ	1.6.99.3	-	C	ko:K03885	ko00190,map00190	ko00000,ko00001,ko01000	NADH dehydrogenase
PHMJEDCH_03220	3.17e-71	yuzD	-	-	S	-	-	-	protein conserved in bacteria
PHMJEDCH_03221	1.26e-47	yutI	-	-	O	-	-	-	COG0694 Thioredoxin-like proteins and domains
PHMJEDCH_03222	0.0	yuxL	3.4.19.1	-	EU	ko:K01303	-	ko00000,ko01000,ko01002	peptidase
PHMJEDCH_03223	2.22e-206	thrB	2.7.1.39	-	E	ko:K00872	ko00260,ko01100,ko01110,ko01120,ko01230,map00260,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
PHMJEDCH_03224	3.65e-248	thrC	4.2.3.1	-	E	ko:K01733	ko00260,ko00750,ko01100,ko01110,ko01120,ko01230,map00260,map00750,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
PHMJEDCH_03225	5.57e-306	hom	1.1.1.3	-	E	ko:K00003	ko00260,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00270,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	homoserine dehydrogenase
PHMJEDCH_03226	5.56e-244	yutH	-	-	S	-	-	-	Spore coat protein
PHMJEDCH_03227	1.07e-108	yutG	3.1.3.27	-	I	ko:K01095	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	COG1267 Phosphatidylglycerophosphatase A and related proteins
PHMJEDCH_03228	1.18e-179	nagD	3.1.3.41	-	G	ko:K01101	ko00627,ko01120,map00627,map01120	ko00000,ko00001,ko01000	Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
PHMJEDCH_03229	3e-93	yutE	-	-	S	-	-	-	Protein of unknown function DUF86
PHMJEDCH_03230	3.71e-62	yutD	-	-	S	-	-	-	protein conserved in bacteria
PHMJEDCH_03231	3.92e-215	lipA	2.8.1.8	-	H	ko:K03644	ko00785,ko01100,map00785,map01100	ko00000,ko00001,ko01000	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
PHMJEDCH_03232	1.26e-245	lytH	-	-	M	ko:K21472	-	ko00000,ko01000,ko01002,ko01011	Peptidase, M23
PHMJEDCH_03233	1.53e-164	yunB	-	-	S	-	-	-	Sporulation protein YunB (Spo_YunB)
PHMJEDCH_03234	0.0	yunD	3.1.3.5	-	F	ko:K01081	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the 5'-nucleotidase family
PHMJEDCH_03235	5.58e-182	yunE	-	-	S	ko:K07090	-	ko00000	membrane transporter protein
PHMJEDCH_03236	7.05e-215	yunF	-	-	S	-	-	-	Protein of unknown function DUF72
PHMJEDCH_03237	2.23e-73	-	-	-	S	-	-	-	phosphoglycolate phosphatase activity
PHMJEDCH_03238	0.0	allB	3.5.2.5	-	F	ko:K01466	ko00230,ko01100,ko01120,map00230,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of allantoin (5- ureidohydantoin) to allantoic acid by hydrolytic cleavage of the five-member hydantoin ring
PHMJEDCH_03239	0.0	pucR	-	-	QT	ko:K09684	-	ko00000,ko03000	COG2508 Regulator of polyketide synthase expression
PHMJEDCH_03240	6.3e-86	-	-	-	-	-	-	-	-
PHMJEDCH_03241	8.83e-267	blt	-	-	EGP	ko:K08153	-	ko00000,ko00002,ko02000	COG0477 Permeases of the major facilitator superfamily
PHMJEDCH_03242	2.55e-287	pucG	2.6.1.112, 2.6.1.44, 2.6.1.45, 2.6.1.51	-	E	ko:K00830,ko:K00839	ko00230,ko00250,ko00260,ko00630,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko04146,map00230,map00250,map00260,map00630,map00680,map01100,map01110,map01120,map01130,map01200,map04146	ko00000,ko00001,ko00002,ko01000,ko01007	COG0075 Serine-pyruvate aminotransferase archaeal aspartate aminotransferase
PHMJEDCH_03243	7.27e-285	pucF	3.5.3.9	-	E	ko:K02083	ko00230,ko01120,map00230,map01120	ko00000,ko00001,ko01000,ko01002	COG0624 Acetylornithine deacetylase Succinyl-diaminopimelate desuccinylase and related deacylases
PHMJEDCH_03244	3.19e-207	bsn	-	-	L	-	-	-	Ribonuclease
PHMJEDCH_03245	1.49e-252	msmX	-	-	P	ko:K10112	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
PHMJEDCH_03246	1.14e-170	frlR1	-	-	K	ko:K03710,ko:K10711	-	ko00000,ko03000	UTRA
PHMJEDCH_03247	1.71e-202	-	2.7.1.218	-	G	ko:K10710	-	ko00000,ko01000	pfkB family carbohydrate kinase
PHMJEDCH_03248	2.91e-199	-	-	-	P	ko:K10119	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG0395 ABC-type sugar transport system, permease component
PHMJEDCH_03249	1.24e-201	yurN	-	-	G	ko:K10118	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PHMJEDCH_03250	1.08e-305	yurO	-	-	G	ko:K10117	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG1653 ABC-type sugar transport system, periplasmic component
PHMJEDCH_03251	8.37e-232	frlB	-	-	M	ko:K10708	-	ko00000,ko01000	Catalyzes the conversion of a range of fructosamine 6- phosphates to glucose 6-phosphate and a free amino acid
PHMJEDCH_03252	8.02e-204	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
PHMJEDCH_03254	1.66e-96	-	-	-	-	-	-	-	-
PHMJEDCH_03255	2.77e-27	-	-	-	S	-	-	-	Sporulation delaying protein SdpA
PHMJEDCH_03257	1.36e-84	yurQ	-	-	L	-	-	-	COG0322 Nuclease subunit of the excinuclease complex
PHMJEDCH_03258	2.19e-251	yurR	1.4.5.1	-	E	ko:K00285	ko00360,map00360	ko00000,ko00001,ko01000	COG0665 Glycine D-amino acid oxidases (deaminating)
PHMJEDCH_03259	1.09e-128	-	-	-	Q	-	-	-	ubiE/COQ5 methyltransferase family
PHMJEDCH_03260	7.45e-94	yncE	-	-	S	-	-	-	Protein of unknown function (DUF2691)
PHMJEDCH_03261	2.49e-192	csn	3.2.1.132	-	M	ko:K01233	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Aids in the defense against invading fungal pathogens by degrading their cell wall chitosan
PHMJEDCH_03262	0.0	sufB	-	-	O	ko:K07033,ko:K09014	-	ko00000	FeS cluster assembly
PHMJEDCH_03263	8.89e-101	nifU	-	-	C	ko:K04488	-	ko00000	COG0822 NifU homolog involved in Fe-S cluster formation
PHMJEDCH_03264	3.01e-294	sufS	2.8.1.7, 4.4.1.16	-	E	ko:K11717	ko00450,ko01100,map00450,map01100	ko00000,ko00001,ko01000	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
PHMJEDCH_03265	1.75e-311	sufD	-	-	O	ko:K07033,ko:K09015	-	ko00000	assembly protein SufD
PHMJEDCH_03266	3.82e-183	sufC	-	-	O	ko:K09013	-	ko00000,ko02000	COG0396 ABC-type transport system involved in Fe-S cluster assembly, ATPase component
PHMJEDCH_03268	2.97e-83	yurZ	-	-	S	-	-	-	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
PHMJEDCH_03269	2.88e-183	metQ	-	-	P	ko:K02072,ko:K02073	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the NlpA lipoprotein family
PHMJEDCH_03270	3.3e-135	metI	-	-	P	ko:K02069,ko:K02072	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG2011 ABC-type metal ion transport system, permease component
PHMJEDCH_03271	1.51e-236	metN	-	-	P	ko:K02071	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
PHMJEDCH_03272	5.08e-74	yusD	-	-	S	-	-	-	SCP-2 sterol transfer family
PHMJEDCH_03273	2.25e-70	yusE	-	-	CO	-	-	-	Thioredoxin
PHMJEDCH_03274	6.99e-79	yusF	-	-	L	ko:K07476	-	ko00000	COG1658 Small primase-like proteins (Toprim domain)
PHMJEDCH_03275	2.99e-53	yusG	-	-	S	-	-	-	Protein of unknown function (DUF2553)
PHMJEDCH_03276	1.19e-84	gcvH	-	-	E	ko:K02437	ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200	ko00000,ko00001,ko00002	Is also involved in protein lipoylation via its role as an octanoyl lipoyl carrier protein intermediate
PHMJEDCH_03277	4.13e-83	yusI	1.20.4.1	-	P	ko:K00537	-	ko00000,ko01000	Belongs to the ArsC family
PHMJEDCH_03278	0.0	fadE	1.3.8.1	-	I	ko:K00248	ko00071,ko00280,ko00650,ko01100,ko01110,ko01120,ko01200,ko01212,map00071,map00280,map00650,map01100,map01110,map01120,map01200,map01212	ko00000,ko00001,ko01000	acyl-CoA dehydrogenase
PHMJEDCH_03279	3.02e-275	fadA	2.3.1.16	-	I	ko:K00632	ko00071,ko00280,ko00281,ko00362,ko00592,ko00642,ko01100,ko01110,ko01120,ko01130,ko01212,map00071,map00280,map00281,map00362,map00592,map00642,map01100,map01110,map01120,map01130,map01212	ko00000,ko00001,ko00002,ko01000	Belongs to the thiolase family
PHMJEDCH_03280	0.0	fadN	1.1.1.35	-	I	ko:K07516	ko00071,ko00362,ko00650,ko01100,ko01120,ko01200,ko01212,map00071,map00362,map00650,map01100,map01120,map01200,map01212	ko00000,ko00001,ko00002,ko01000	3-hydroxyacyl-CoA dehydrogenase
PHMJEDCH_03281	1.72e-10	-	-	-	S	-	-	-	YuzL-like protein
PHMJEDCH_03282	6.69e-209	fadM	-	-	E	ko:K00318	ko00330,ko01100,ko01110,ko01130,map00330,map01100,map01110,map01130	ko00000,ko00001,ko01000	Proline dehydrogenase
PHMJEDCH_03283	7.03e-53	-	-	-	-	-	-	-	-
PHMJEDCH_03284	3.53e-69	yusN	-	-	M	-	-	-	Coat F domain
PHMJEDCH_03285	1.47e-86	yusO	-	-	K	-	-	-	Iron dependent repressor, N-terminal DNA binding domain
PHMJEDCH_03286	0.0	yusP	-	-	P	-	-	-	Major facilitator superfamily
PHMJEDCH_03287	6.56e-74	-	-	-	L	-	-	-	PFAM Restriction endonuclease BamHI
PHMJEDCH_03288	1.48e-23	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
PHMJEDCH_03289	3.73e-159	-	2.1.1.72	-	L	ko:K00571	-	ko00000,ko01000,ko02048	DNA methylase
PHMJEDCH_03290	1.46e-50	yusU	-	-	S	-	-	-	Protein of unknown function (DUF2573)
PHMJEDCH_03291	1.06e-191	yusV	3.6.3.34	-	HP	ko:K02013	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter
PHMJEDCH_03292	2.79e-62	-	-	-	S	-	-	-	YusW-like protein
PHMJEDCH_03293	0.0	pepF2	-	-	E	-	-	-	COG1164 Oligoendopeptidase F
PHMJEDCH_03294	1.77e-177	yusZ	-	-	IQ	-	-	-	Belongs to the short-chain dehydrogenases reductases (SDR) family
PHMJEDCH_03295	5.63e-101	dps2	-	-	P	ko:K04047	-	ko00000,ko03036	Belongs to the Dps family
PHMJEDCH_03296	8.65e-295	htrA	3.4.21.107	-	O	ko:K04771	ko01503,ko02020,map01503,map02020	ko00000,ko00001,ko00002,ko01000,ko01002,ko03110	COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
PHMJEDCH_03297	2.06e-160	cssR	-	-	T	ko:K07770	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PHMJEDCH_03298	9.22e-317	cssS	2.7.13.3	-	T	ko:K07650	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
PHMJEDCH_03299	2.68e-32	-	-	-	-	-	-	-	-
PHMJEDCH_03300	6.7e-196	yuxN	-	-	K	-	-	-	Transcriptional regulator
PHMJEDCH_03301	0.0	fumC	4.2.1.2	-	C	ko:K01679	ko00020,ko00620,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko04934,ko05200,ko05211,map00020,map00620,map00720,map01100,map01110,map01120,map01130,map01200,map04934,map05200,map05211	ko00000,ko00001,ko00002,ko01000	Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
PHMJEDCH_03302	1.83e-33	-	-	-	S	-	-	-	Protein of unknown function (DUF3970)
PHMJEDCH_03303	0.0	gerAA	-	-	EG	ko:K06288,ko:K06291,ko:K06310	-	ko00000	Spore germination protein
PHMJEDCH_03304	1.73e-234	gerAB	-	-	E	ko:K06289,ko:K06292	-	ko00000,ko02000	Spore germination protein
PHMJEDCH_03305	9.22e-248	gerAC	-	-	S	ko:K06290,ko:K06293,ko:K06312	-	ko00000	Spore germination B3/ GerAC like, C-terminal
PHMJEDCH_03306	8.35e-139	vraR	-	-	KT	ko:K07694,ko:K11618	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
PHMJEDCH_03307	2.86e-246	vraS	2.7.13.3	-	T	ko:K07681,ko:K11617	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
PHMJEDCH_03308	6.74e-159	-	-	-	S	ko:K11622	ko02020,map02020	ko00000,ko00001	Cell wall-active antibiotics response 4TMS YvqF
PHMJEDCH_03309	1.33e-165	liaG	-	-	S	ko:K11621	ko02020,map02020	ko00000,ko00001	Putative adhesin
PHMJEDCH_03310	6e-128	liaH	-	-	KT	ko:K03969,ko:K11620	ko02020,map02020	ko00000,ko00001,ko00002	COG1842 Phage shock protein A (IM30), suppresses sigma54-dependent transcription
PHMJEDCH_03311	7.39e-65	liaI	-	-	S	ko:K11619	ko02020,map02020	ko00000,ko00001,ko00002	membrane
PHMJEDCH_03312	9.45e-281	yvqJ	-	-	EGP	-	-	-	COG0477 Permeases of the major facilitator superfamily
PHMJEDCH_03313	3.89e-125	yvqK	2.5.1.17	-	S	ko:K00798	ko00860,ko01100,map00860,map01100	ko00000,ko00001,ko00002,ko01000	Adenosyltransferase
PHMJEDCH_03314	1.87e-257	yvrA	3.6.3.34	-	HP	ko:K02013	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	COG1120 ABC-type cobalamin Fe3 -siderophores transport systems, ATPase components
PHMJEDCH_03315	5.73e-224	btuC	-	-	P	ko:K02015	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PHMJEDCH_03316	1.07e-211	yvrC	-	-	P	ko:K02016	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
PHMJEDCH_03317	4.79e-178	yvrD	-	-	IQ	-	-	-	Belongs to the short-chain dehydrogenases reductases (SDR) family
PHMJEDCH_03318	2.36e-213	yvrE	-	-	G	ko:K14274	ko00040,map00040	ko00000,ko00001,ko01000	SMP-30/Gluconolaconase/LRE-like region
PHMJEDCH_03319	0.0	yvrG	-	-	T	-	-	-	Histidine kinase
PHMJEDCH_03320	4.48e-171	yvrH	-	-	T	ko:K02483	-	ko00000,ko02022	COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PHMJEDCH_03321	1.14e-48	-	-	-	-	-	-	-	-
PHMJEDCH_03322	1.47e-130	yvrI	-	-	K	ko:K03093	-	ko00000,ko03021	RNA polymerase
PHMJEDCH_03323	1.88e-21	-	-	-	S	-	-	-	YvrJ protein family
PHMJEDCH_03324	9.98e-292	oxdC	4.1.1.2	-	G	ko:K01569	ko00630,ko01100,map00630,map01100	ko00000,ko00001,ko01000	Oxalate decarboxylase
PHMJEDCH_03325	1.37e-78	yvrL	-	-	S	-	-	-	Regulatory protein YrvL
PHMJEDCH_03326	5.43e-186	fhuC	3.6.3.34	-	HP	ko:K02013	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter
PHMJEDCH_03327	9.44e-217	fhuG	-	-	P	ko:K02015	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PHMJEDCH_03328	6.08e-234	fhuB	-	-	P	ko:K02015	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PHMJEDCH_03329	2.12e-226	fhuD	-	-	P	ko:K02016	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
PHMJEDCH_03330	2.17e-153	-	-	-	Q	-	-	-	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
PHMJEDCH_03331	0.0	yvsH	-	-	E	ko:K03294,ko:K03758	-	ko00000,ko02000	Arginine ornithine antiporter
PHMJEDCH_03332	4.34e-19	-	-	-	S	ko:K06427	-	ko00000	Small spore protein J (Spore_SspJ)
PHMJEDCH_03333	2.04e-110	yvsG	-	-	S	ko:K07038	-	ko00000	LexA-binding, inner membrane-associated putative hydrolase
PHMJEDCH_03334	0.0	yvgJ	-	-	M	ko:K01138	-	ko00000,ko01000	Belongs to the LTA synthase family
PHMJEDCH_03335	8.02e-204	yvgK	-	-	P	ko:K07219	-	ko00000	COG1910 Periplasmic molybdate-binding protein domain
PHMJEDCH_03336	4.92e-174	modA	-	-	P	ko:K02020	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG0725 ABC-type molybdate transport system, periplasmic component
PHMJEDCH_03337	1.21e-128	modB	-	-	P	ko:K02018	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG4149 ABC-type molybdate transport system, permease component
PHMJEDCH_03338	2.17e-146	yfiK	-	-	K	-	-	-	Regulator
PHMJEDCH_03339	3.01e-237	-	-	-	T	-	-	-	Histidine kinase
PHMJEDCH_03340	1.12e-216	sagG	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	COG1131 ABC-type multidrug transport system, ATPase component
PHMJEDCH_03341	3.65e-235	sagH	-	-	V	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 type transporter
PHMJEDCH_03342	1.44e-229	sagI	-	-	V	ko:K01992	-	ko00000,ko00002,ko02000	COG0842 ABC-type multidrug transport system, permease component
PHMJEDCH_03343	1.2e-198	yvgN	-	-	S	-	-	-	reductase
PHMJEDCH_03344	6.3e-110	yvgO	-	-	-	-	-	-	-
PHMJEDCH_03345	0.0	yvgP	-	-	P	ko:K03316	-	ko00000	COG0025 NhaP-type Na H and K H antiporters
PHMJEDCH_03346	0.0	cysI	1.8.1.2, 1.8.7.1	-	P	ko:K00381,ko:K00392	ko00920,ko01100,ko01120,map00920,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate
PHMJEDCH_03347	0.0	cysJ	1.8.1.2	-	P	ko:K00380	ko00920,ko01100,ko01120,map00920,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
PHMJEDCH_03348	0.0	helD	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	DNA helicase
PHMJEDCH_03349	9.04e-130	yvgT	-	-	S	-	-	-	membrane
PHMJEDCH_03350	8.69e-187	-	-	-	S	-	-	-	Metallo-peptidase family M12
PHMJEDCH_03351	2.51e-94	bdbC	-	-	O	ko:K03611	-	ko00000,ko03110	Required for disulfide bond formation in some proteins
PHMJEDCH_03352	4.84e-133	bdbD	-	-	O	-	-	-	Thioredoxin
PHMJEDCH_03353	0.0	cadA	3.6.3.3, 3.6.3.5	-	P	ko:K01534	-	ko00000,ko01000	COG2217 Cation transport ATPase
PHMJEDCH_03354	0.0	copA	3.6.3.54	-	P	ko:K17686	ko01524,ko04016,map01524,map04016	ko00000,ko00001,ko01000	P-type ATPase
PHMJEDCH_03355	4.44e-38	-	-	-	P	ko:K07213	ko04978,map04978	ko00000,ko00001	Heavy-metal-associated domain
PHMJEDCH_03356	2.05e-61	csoR	-	-	S	ko:K21600	-	ko00000,ko03000	transcriptional
PHMJEDCH_03357	3.08e-243	yvaA	1.1.1.371	-	S	ko:K16044	ko00562,ko01120,map00562,map01120	ko00000,ko00001,ko01000	Oxidoreductase
PHMJEDCH_03358	1.03e-153	azoR	-	-	I	ko:K01118	-	ko00000,ko01000	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
PHMJEDCH_03359	2.7e-313	ytnJ	-	-	C	-	-	-	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
PHMJEDCH_03360	9.38e-58	ytnI	-	-	O	-	-	-	COG0695 Glutaredoxin and related proteins
PHMJEDCH_03361	1.65e-221	ytmO	-	-	C	-	-	-	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
PHMJEDCH_03362	2.03e-177	tcyN	-	-	E	ko:K16960	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	COG1126 ABC-type polar amino acid transport system, ATPase component
PHMJEDCH_03363	6.21e-151	-	-	-	U	ko:K16959	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PHMJEDCH_03364	9.1e-151	ytmL	-	-	P	ko:K16958,ko:K16959	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PHMJEDCH_03365	5.62e-185	tcyK	-	-	M	ko:K16957	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial periplasmic substrate-binding proteins
PHMJEDCH_03366	1.81e-164	-	-	-	ET	ko:K16956,ko:K16957,ko:K16961	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial periplasmic substrate-binding proteins
PHMJEDCH_03367	2.71e-129	ytmI	-	-	K	ko:K00680	-	ko00000,ko01000	Acetyltransferase (GNAT) domain
PHMJEDCH_03368	3.97e-204	ytlI	-	-	K	ko:K21960	-	ko00000,ko03000	LysR substrate binding domain
PHMJEDCH_03369	2.85e-153	yvaG	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Belongs to the short-chain dehydrogenases reductases (SDR) family
PHMJEDCH_03370	3.78e-11	yvaG	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Belongs to the short-chain dehydrogenases reductases (SDR) family
PHMJEDCH_03371	9.41e-56	yrdF	-	-	K	ko:K03623	-	ko00000	ribonuclease inhibitor
PHMJEDCH_03373	4.85e-107	smpB	-	-	O	ko:K03664	-	ko00000	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
PHMJEDCH_03374	0.0	rnr	-	-	K	ko:K12573	ko03018,map03018	ko00000,ko00001,ko01000,ko03016,ko03019	3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
PHMJEDCH_03375	6.92e-183	est	3.1.1.1	-	S	ko:K03928	-	ko00000,ko01000	Carboxylesterase
PHMJEDCH_03376	9.24e-36	secG	-	-	U	ko:K03075	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Preprotein translocase subunit SecG
PHMJEDCH_03377	1.64e-47	yvzC	-	-	K	-	-	-	transcriptional
PHMJEDCH_03378	1.07e-89	yvaO	-	-	K	ko:K22299	-	ko00000,ko03000	transcriptional
PHMJEDCH_03379	1.09e-90	yvaO	-	-	K	ko:K22299	-	ko00000,ko03000	Cro/C1-type HTH DNA-binding domain
PHMJEDCH_03380	1.17e-67	yvaP	-	-	K	-	-	-	transcriptional
PHMJEDCH_03381	1.49e-309	spaK	2.7.13.3	-	T	ko:K20487	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	His Kinase A (phosphoacceptor) domain
PHMJEDCH_03382	5.04e-154	spaR	-	-	K	ko:K20488	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko02022	Transcriptional regulatory protein, C terminal
PHMJEDCH_03383	3.2e-166	spaG	-	-	S	ko:K20492	ko02010,ko02020,ko02024,map02010,map02020,map02024	ko00000,ko00001,ko00002,ko02000	ABC-2 family transporter protein
PHMJEDCH_03384	3.17e-153	spaE	-	-	S	ko:K20491	ko02010,ko02020,ko02024,map02010,map02020,map02024	ko00000,ko00001,ko00002,ko02000	ABC-2 family transporter protein
PHMJEDCH_03385	2.46e-158	spaF	-	-	V	ko:K01990,ko:K20459,ko:K20490	ko02010,ko02020,ko02024,map02010,map02020,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, ATP-binding protein
PHMJEDCH_03386	3.47e-143	opuCD	-	-	P	ko:K05846	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG1174 ABC-type proline glycine betaine transport systems, permease component
PHMJEDCH_03387	4.75e-215	opuCC	-	-	M	ko:K05845	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG1732 Periplasmic glycine betaine choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)
PHMJEDCH_03388	2.57e-141	opuCB	-	-	P	ko:K05846	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG1174 ABC-type proline glycine betaine transport systems, permease component
PHMJEDCH_03389	1.25e-262	opuCA	-	-	E	ko:K05847	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG1125 ABC-type proline glycine betaine transport systems, ATPase components
PHMJEDCH_03390	3.5e-108	-	-	-	K	ko:K22301	-	ko00000,ko03000	Belongs to the GbsR family
PHMJEDCH_03391	2.95e-139	opuCD	-	-	P	ko:K05846	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG1174 ABC-type proline glycine betaine transport systems, permease component
PHMJEDCH_03392	6.03e-218	opuCC	-	-	M	ko:K05845	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG1732 Periplasmic glycine betaine choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)
PHMJEDCH_03393	5.4e-143	opuCB	-	-	P	ko:K05846	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG1174 ABC-type proline glycine betaine transport systems, permease component
PHMJEDCH_03394	1.21e-268	opuCA	-	-	E	ko:K05847	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG1125 ABC-type proline glycine betaine transport systems, ATPase components
PHMJEDCH_03395	2.67e-125	-	-	-	K	ko:K22301	-	ko00000,ko03000	Belongs to the GbsR family
PHMJEDCH_03396	1.55e-134	yvbG	-	-	U	ko:K05595	-	ko00000,ko02000	UPF0056 membrane protein
PHMJEDCH_03397	1.58e-149	yvbI	-	-	M	-	-	-	Membrane
PHMJEDCH_03398	0.0	tcaA	-	-	S	ko:K21463	-	ko00000	response to antibiotic
PHMJEDCH_03399	5.07e-103	yvbK	-	-	K	-	-	-	acetyltransferase
PHMJEDCH_03400	4.16e-260	-	-	-	EGP	-	-	-	Major facilitator Superfamily
PHMJEDCH_03401	5.36e-219	-	-	-	-	-	-	-	-
PHMJEDCH_03402	3.54e-159	-	-	-	S	-	-	-	GlcNAc-PI de-N-acetylase
PHMJEDCH_03403	1.13e-182	-	-	-	C	-	-	-	WbqC-like protein family
PHMJEDCH_03404	2.49e-179	-	-	-	M	-	-	-	Protein involved in cellulose biosynthesis
PHMJEDCH_03405	6.62e-279	-	-	-	E	-	-	-	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
PHMJEDCH_03406	6.48e-215	arnA	4.2.1.46, 5.1.3.2	-	M	ko:K01710,ko:K01784	ko00052,ko00520,ko00521,ko00523,ko00525,ko01055,ko01100,ko01130,map00052,map00520,map00521,map00523,map00525,map01055,map01100,map01130	ko00000,ko00001,ko00002,ko01000	GDP-mannose 4,6 dehydratase
PHMJEDCH_03407	2.68e-275	-	2.6.1.102	-	E	ko:K13010	ko00520,map00520	ko00000,ko00001,ko01000,ko01005,ko01007	Belongs to the DegT DnrJ EryC1 family
PHMJEDCH_03408	9.36e-317	-	1.1.1.136	-	M	ko:K13015	ko00520,map00520	ko00000,ko00001,ko01000,ko01005	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
PHMJEDCH_03409	2.83e-286	ywaD	3.4.11.10, 3.4.11.6	-	S	ko:K19701	-	ko00000,ko01000,ko01002	PA domain
PHMJEDCH_03410	9.69e-310	eno	4.2.1.11	-	G	ko:K01689	ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066	ko00000,ko00001,ko00002,ko01000,ko03019,ko04147	Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
PHMJEDCH_03411	0.0	gpmI	5.4.2.12	-	G	ko:K15633	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the interconversion of 2-phosphoglycerate and
PHMJEDCH_03412	1.49e-176	tpiA	5.3.1.1	-	G	ko:K01803	ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
PHMJEDCH_03413	1.55e-274	pgk	2.7.2.3	-	F	ko:K00927	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the phosphoglycerate kinase family
PHMJEDCH_03414	2.83e-238	gapA	1.2.1.12	-	G	ko:K00134	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
PHMJEDCH_03415	1.91e-236	cggR	-	-	K	ko:K05311	-	ko00000,ko03000	COG2390 Transcriptional regulator, contains sigma factor-related N-terminal domain
PHMJEDCH_03417	0.0	araE	-	-	U	ko:K02100,ko:K06609	-	ko00000,ko02000	Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family
PHMJEDCH_03418	6.86e-255	araR	-	-	K	ko:K02103	-	ko00000,ko03000	transcriptional
PHMJEDCH_03419	1.78e-241	yvbT	-	-	C	-	-	-	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
PHMJEDCH_03420	5.29e-161	yvbU	-	-	K	-	-	-	Transcriptional regulator
PHMJEDCH_03421	5.35e-196	yvbV	-	-	EG	-	-	-	EamA-like transporter family
PHMJEDCH_03422	6.69e-275	yvbW	-	-	E	ko:K03293	-	ko00000	COG1113 Gamma-aminobutyrate permease and related permeases
PHMJEDCH_03424	2.88e-190	gntR	-	-	K	-	-	-	RpiR family transcriptional regulator
PHMJEDCH_03425	0.0	gntK	2.7.1.12	-	G	ko:K00851	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko01000	Belongs to the FGGY kinase family
PHMJEDCH_03426	3.08e-287	gntP	-	-	EG	ko:K03299	-	ko00000,ko02000	COG2610 H gluconate symporter and related permeases
PHMJEDCH_03427	3.12e-167	lutC	-	-	S	ko:K00782	-	ko00000	Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source
PHMJEDCH_03428	0.0	lutB	-	-	C	ko:K18929	-	ko00000	Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source. Has probably a role as an electron transporter during oxidation of L-lactate
PHMJEDCH_03429	1.69e-170	lutA	-	-	C	ko:K18928	-	ko00000	Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source
PHMJEDCH_03430	4.18e-264	-	-	-	EK	ko:K05825	ko00300,ko01100,ko01130,ko01210,map00300,map01100,map01130,map01210	ko00000,ko00001,ko01000	COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
PHMJEDCH_03431	1.16e-151	yvfI	-	-	K	ko:K05799	-	ko00000,ko03000	COG2186 Transcriptional regulators
PHMJEDCH_03432	0.0	lctP	-	-	C	ko:K03303	-	ko00000,ko02000	L-lactate permease
PHMJEDCH_03433	1.61e-293	rpoN	-	-	K	ko:K03092	ko02020,ko05111,map02020,map05111	ko00000,ko00001,ko03021	COG1508 DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog
PHMJEDCH_03434	4.01e-44	yvfG	-	-	S	-	-	-	YvfG protein
PHMJEDCH_03435	2.77e-224	epsO	-	-	GM	ko:K19431	-	ko00000,ko01000	Exopolysaccharide biosynthesis protein
PHMJEDCH_03436	2.79e-275	epsN	-	-	E	ko:K19430	-	ko00000,ko01000	Belongs to the DegT DnrJ EryC1 family
PHMJEDCH_03437	1.28e-70	epsM	-	-	GM	ko:K19429	-	ko00000,ko01000	COG0110 Acetyltransferase (isoleucine patch superfamily)
PHMJEDCH_03438	2.7e-131	epsL	-	-	M	ko:K13012,ko:K19428	-	ko00000,ko01000,ko01005	COG2148 Sugar transferases involved in lipopolysaccharide synthesis
PHMJEDCH_03439	0.0	epsK	-	-	S	ko:K19418	-	ko00000,ko02000	COG2244 Membrane protein involved in the export of O-antigen and teichoic acid
PHMJEDCH_03440	1.71e-239	epsJ	-	GT2	S	ko:K19427	-	ko00000,ko01000	COG0463 Glycosyltransferases involved in cell wall biogenesis
PHMJEDCH_03441	6.55e-251	epsI	-	-	GM	ko:K19426	-	ko00000,ko01000	pyruvyl transferase
PHMJEDCH_03442	6.01e-245	epsH	-	GT2	S	ko:K19425	-	ko00000,ko01000,ko01003	Glycosyltransferase like family 2
PHMJEDCH_03443	6.38e-258	epsG	-	-	S	ko:K19419	-	ko00000,ko02000	EpsG family
PHMJEDCH_03444	1.95e-253	epsF	-	GT4	M	ko:K19424	-	ko00000,ko01000,ko01003	Glycosyl transferases group 1
PHMJEDCH_03445	3.44e-200	epsE	-	GT2	M	ko:K19423	-	ko00000,ko01000,ko01003	COG0463 Glycosyltransferases involved in cell wall biogenesis
PHMJEDCH_03446	4.24e-269	epsD	-	GT4	M	ko:K19422	-	ko00000,ko01000	Glycosyl transferase 4-like
PHMJEDCH_03447	0.0	capD	-	-	GM	ko:K19421	-	ko00000	Polysaccharide biosynthesis protein
PHMJEDCH_03448	3.12e-151	ywqD	2.7.10.2	-	D	ko:K00903	-	ko00000,ko01000,ko01001	COG0489 ATPases involved in chromosome partitioning
PHMJEDCH_03449	4.37e-151	epsA	-	-	M	ko:K19420	-	ko00000	biosynthesis protein
PHMJEDCH_03450	5.95e-101	-	-	-	K	ko:K19417	-	ko00000,ko03000	transcriptional
PHMJEDCH_03451	8.66e-312	pnbA	-	CE10	I	ko:K03929	-	ko00000,ko01000	Belongs to the type-B carboxylesterase lipase family
PHMJEDCH_03453	8.3e-111	ywjB	-	-	H	-	-	-	RibD C-terminal domain
PHMJEDCH_03454	4.2e-164	-	-	-	CH	-	-	-	FAD binding domain
PHMJEDCH_03455	2.74e-98	glx2	-	-	S	-	-	-	Metallo-beta-lactamase superfamily
PHMJEDCH_03456	5.22e-137	yyaS	-	-	S	ko:K07149	-	ko00000	Membrane
PHMJEDCH_03457	3.65e-108	paiA	2.3.1.57	-	K	ko:K22441	-	ko00000,ko01000	COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PHMJEDCH_03458	7.09e-121	padC	-	-	Q	ko:K13727	-	ko00000,ko01000	Phenolic acid decarboxylase
PHMJEDCH_03459	1.25e-63	-	-	-	S	-	-	-	Protein of unknown function (DUF3237)
PHMJEDCH_03460	3.4e-43	-	-	-	S	-	-	-	Protein of unknown function (DUF1433)
PHMJEDCH_03461	1.63e-30	-	-	-	S	-	-	-	Protein of unknown function (DUF1433)
PHMJEDCH_03462	6.57e-25	-	-	-	S	-	-	-	Protein of unknown function (DUF1433)
PHMJEDCH_03463	0.0	-	-	-	I	-	-	-	Pfam Lipase (class 3)
PHMJEDCH_03464	3.08e-44	-	-	-	-	-	-	-	-
PHMJEDCH_03466	0.0	cscA	3.2.1.26	GH32	G	ko:K01193	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	invertase
PHMJEDCH_03467	5.05e-279	rafB	-	-	P	ko:K02532	-	ko00000,ko02000	LacY proton/sugar symporter
PHMJEDCH_03468	9.34e-227	scrR	-	-	K	ko:K02529,ko:K03484	-	ko00000,ko03000	transcriptional
PHMJEDCH_03469	3.74e-136	clpP	3.4.21.92	-	OU	ko:K01358	ko04112,ko04212,map04112,map04212	ko00000,ko00001,ko01000,ko01002	Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
PHMJEDCH_03470	3.64e-177	yraN	-	-	K	-	-	-	Transcriptional regulator
PHMJEDCH_03471	3.16e-258	yraM	-	-	S	-	-	-	PrpF protein
PHMJEDCH_03472	6.64e-313	-	-	-	EGP	-	-	-	Sugar (and other) transporter
PHMJEDCH_03473	1.06e-110	-	-	-	-	-	-	-	-
PHMJEDCH_03474	2.36e-131	yvdD	3.2.2.10	-	S	ko:K06966	ko00230,ko00240,map00230,map00240	ko00000,ko00001,ko01000	Belongs to the LOG family
PHMJEDCH_03475	5.98e-66	yvdC	-	-	S	-	-	-	MazG nucleotide pyrophosphohydrolase domain
PHMJEDCH_03476	0.0	yvdB	-	-	P	ko:K03321	-	ko00000,ko02000	COG0659 Sulfate permease and related transporters (MFS superfamily)
PHMJEDCH_03477	8.55e-135	yvdA	4.2.1.1	-	P	ko:K01673	ko00910,map00910	ko00000,ko00001,ko01000	Reversible hydration of carbon dioxide
PHMJEDCH_03478	7.72e-229	yvcT	1.1.1.215, 1.1.1.26, 1.1.1.79, 1.1.1.81	-	CH	ko:K00015,ko:K00090	ko00030,ko00260,ko00620,ko00630,ko01100,ko01110,ko01120,map00030,map00260,map00620,map00630,map01100,map01110,map01120	ko00000,ko00001,ko01000	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PHMJEDCH_03479	4.11e-100	-	-	-	M	-	-	-	Ribonuclease
PHMJEDCH_03480	1.94e-165	yvcN	2.3.1.118	-	Q	ko:K00675	-	ko00000,ko01000	Belongs to the arylamine N-acetyltransferase family
PHMJEDCH_03481	6.52e-49	crh	-	-	G	ko:K11184	-	ko00000	Phosphocarrier protein Chr
PHMJEDCH_03482	5.16e-220	whiA	-	-	K	ko:K09762	-	ko00000	May be required for sporulation
PHMJEDCH_03483	3.51e-223	yvcK	-	-	S	-	-	-	Required for morphogenesis under gluconeogenic growth conditions
PHMJEDCH_03484	1.41e-211	yvcJ	-	-	S	ko:K06958	-	ko00000,ko03019	Displays ATPase and GTPase activities
PHMJEDCH_03485	2.98e-112	yvcI	3.6.1.55	-	F	ko:K03574	-	ko00000,ko01000,ko03400	COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes
PHMJEDCH_03486	4.78e-223	trxB	1.8.1.9	-	C	ko:K00384	ko00450,map00450	ko00000,ko00001,ko01000	Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
PHMJEDCH_03487	1.39e-194	spl	-	-	M	ko:K21471	-	ko00000,ko01000,ko01002,ko01011	protein conserved in bacteria
PHMJEDCH_03488	0.0	yvcD	-	-	S	-	-	-	COG0457 FOG TPR repeat
PHMJEDCH_03489	1.01e-231	sasA	-	-	T	-	-	-	Histidine kinase
PHMJEDCH_03490	1.49e-153	mprA3	-	-	T	-	-	-	COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PHMJEDCH_03491	0.0	lmrA	3.6.3.44	-	V	ko:K02021,ko:K18104	ko01501,ko02010,map01501,map02010	ko00000,ko00001,ko00002,ko01000,ko01504,ko02000	ABC transporter
PHMJEDCH_03492	8.74e-139	hisI	3.5.4.19, 3.6.1.31	-	E	ko:K01496,ko:K11755	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	belongs to the PRA-CH family
PHMJEDCH_03493	4.63e-175	hisF	-	-	E	ko:K02500	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
PHMJEDCH_03494	6.02e-163	hisA	5.3.1.16	-	E	ko:K01814	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
PHMJEDCH_03495	1.75e-141	hisH	-	-	E	ko:K02501	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
PHMJEDCH_03496	6.49e-135	hisB	4.2.1.19	-	E	ko:K01693	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	imidazoleglycerol-phosphate dehydratase
PHMJEDCH_03497	4.77e-279	hisD	1.1.1.23	-	E	ko:K00013	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
PHMJEDCH_03498	1.45e-145	hisG	2.4.2.17	-	E	ko:K00765,ko:K02502	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity
PHMJEDCH_03499	8.64e-258	hisZ	-	-	E	ko:K02502	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
PHMJEDCH_03500	3.83e-173	yvpB	-	-	NU	-	-	-	protein conserved in bacteria
PHMJEDCH_03501	1.2e-110	yvoF	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	COG0110 Acetyltransferase (isoleucine patch superfamily)
PHMJEDCH_03502	3.18e-155	ppaX	3.6.1.1	-	S	ko:K06019	ko00190,map00190	ko00000,ko00001,ko01000	Hydrolyzes pyrophosphate formed during P-Ser-HPr dephosphorylation by HPrK P. Might play a role in controlling the intracellular pyrophosphate pool
PHMJEDCH_03503	5.06e-193	lgt	-	-	M	ko:K13292	-	ko00000,ko01000	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
PHMJEDCH_03504	6e-216	hprK	-	-	F	ko:K06023	-	ko00000,ko01000	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Also phosphorylates dephosphorylates the HPr-like catabolite repression protein crh on a specific serine residue. Therefore, by controlling the phosphorylation state of HPr and crh, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
PHMJEDCH_03505	2.47e-272	nagA	3.5.1.25	-	G	ko:K01443	ko00520,ko01130,map00520,map01130	ko00000,ko00001,ko01000	Belongs to the metallo-dependent hydrolases superfamily. NagA family
PHMJEDCH_03506	1.44e-168	nagB	3.5.99.6	-	G	ko:K02564	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
PHMJEDCH_03507	2.9e-169	yvoA	-	-	K	ko:K03710	-	ko00000,ko03000	transcriptional
PHMJEDCH_03508	6.76e-131	yxaF	-	-	K	ko:K18939	-	ko00000,ko00002,ko03000	Transcriptional regulator
PHMJEDCH_03509	0.0	yvnB	-	-	Q	-	-	-	Calcineurin-like phosphoesterase
PHMJEDCH_03510	1.09e-65	yvlD	-	-	S	ko:K08972	-	ko00000	Membrane
PHMJEDCH_03511	8.1e-36	yvlC	-	-	KT	ko:K03973	-	ko00000,ko02048,ko03000	PspC domain
PHMJEDCH_03512	4.14e-214	yvlB	-	-	S	-	-	-	Putative adhesin
PHMJEDCH_03513	5.13e-61	yvlA	-	-	-	-	-	-	-
PHMJEDCH_03514	1.29e-40	yvkN	-	-	-	-	-	-	-
PHMJEDCH_03515	0.0	uvrA	-	-	L	ko:K03701	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
PHMJEDCH_03516	0.0	uvrB	-	-	L	ko:K03702	ko03420,map03420	ko00000,ko00001,ko03400	damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
PHMJEDCH_03517	2.59e-45	csbA	-	-	S	-	-	-	protein conserved in bacteria
PHMJEDCH_03518	0.0	yvkC	2.7.9.2	-	GT	ko:K01007	ko00620,ko00680,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Phosphotransferase
PHMJEDCH_03519	1.12e-119	yvkB	-	-	K	-	-	-	Transcriptional regulator
PHMJEDCH_03520	3.49e-290	yvkA	-	-	P	-	-	-	-transporter
PHMJEDCH_03523	7.71e-276	minJ	-	-	O	-	-	-	COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
PHMJEDCH_03524	5.83e-72	swrA	-	-	S	-	-	-	Swarming motility protein
PHMJEDCH_03525	0.0	ctpB	3.4.21.102	-	M	ko:K03797	-	ko00000,ko01000,ko01002	Belongs to the peptidase S41A family
PHMJEDCH_03526	5.2e-276	ywoF	-	-	P	-	-	-	Right handed beta helix region
PHMJEDCH_03527	1.48e-196	ftsX	-	-	D	ko:K09811	ko02010,map02010	ko00000,ko00001,ko00002,ko02000,ko03036	Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation
PHMJEDCH_03528	3.53e-158	ftsE	-	-	D	ko:K09812	ko02010,map02010	ko00000,ko00001,ko00002,ko02000,ko03036	cell division ATP-binding protein FtsE
PHMJEDCH_03529	1.47e-58	cccB	-	-	C	ko:K12263,ko:K13300	-	ko00000	COG2010 Cytochrome c, mono- and diheme variants
PHMJEDCH_03530	5.39e-189	yvjA	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2179)
PHMJEDCH_03531	1.08e-222	prfB	-	-	J	ko:K02836	-	ko00000,ko03012	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
PHMJEDCH_03532	0.0	secA	-	-	U	ko:K03070	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
PHMJEDCH_03533	4.25e-130	hpf	-	-	J	ko:K05808	-	ko00000,ko03009	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
PHMJEDCH_03534	1.92e-89	-	-	-	-	-	-	-	-
PHMJEDCH_03535	1.57e-09	fliT	-	-	S	ko:K02423	ko02040,map02040	ko00000,ko00001,ko02035	bacterial-type flagellum organization
PHMJEDCH_03536	2.18e-83	fliS	-	-	N	ko:K02422	ko02040,map02040	ko00000,ko00001,ko02035	flagellar protein FliS
PHMJEDCH_03537	0.0	fliD	-	-	N	ko:K02407	ko02040,map02040	ko00000,ko00001,ko02035	morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
PHMJEDCH_03538	9.98e-154	hag	-	-	N	ko:K02406	ko02020,ko02040,ko04621,ko04626,ko05132,ko05134,map02020,map02040,map04621,map04626,map05132,map05134	ko00000,ko00001,ko02035	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
PHMJEDCH_03539	2.67e-43	csrA	-	-	T	ko:K03563	ko02020,ko02025,ko02026,ko05111,map02020,map02025,map02026,map05111	ko00000,ko00001,ko03019	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
PHMJEDCH_03540	5.2e-98	fliW	-	-	S	ko:K13626	-	ko00000,ko02035	Binds to the C-terminal region of flagellin, which is implicated in polymerization, and participates in the assembly of the flagellum
PHMJEDCH_03541	1.27e-104	yviE	-	-	-	-	-	-	-
PHMJEDCH_03542	1.63e-206	flgL	-	-	N	ko:K02397	ko02040,map02040	ko00000,ko00001,ko02035	Belongs to the bacterial flagellin family
PHMJEDCH_03543	0.0	flgK	-	-	N	ko:K02396	ko02040,map02040	ko00000,ko00001,ko02035	flagellar hook-associated protein
PHMJEDCH_03544	1.43e-101	yvyG	-	-	NOU	-	-	-	FlgN protein
PHMJEDCH_03545	5.05e-52	flgM	-	-	KNU	ko:K02398	ko02020,ko02025,ko02026,ko02040,map02020,map02025,map02026,map02040	ko00000,ko00001,ko02035	Negative regulator of flagellin synthesis
PHMJEDCH_03546	3.56e-94	yvyF	-	-	S	-	-	-	flagellar protein
PHMJEDCH_03547	4.91e-79	comFC	-	-	S	ko:K02242	-	ko00000,ko00002,ko02044	Phosphoribosyl transferase domain
PHMJEDCH_03548	2.93e-56	comFB	-	-	S	ko:K02241	-	ko00000,ko00002,ko02044	Late competence development protein ComFB
PHMJEDCH_03549	5.41e-316	comFA	-	-	L	ko:K02240	-	ko00000,ko00002,ko02044	COG4098 Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
PHMJEDCH_03550	3.16e-197	degV	-	-	S	-	-	-	protein conserved in bacteria
PHMJEDCH_03551	7.16e-163	degU	-	-	KT	ko:K02479,ko:K07692	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko02022	COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
PHMJEDCH_03552	2.31e-245	degS	2.7.13.3	-	T	ko:K07777	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Member of the two-component regulatory system DegS DegU, which plays an important role in the transition growth phase
PHMJEDCH_03553	1.1e-150	yvyE	3.4.13.9	-	S	ko:K01271	-	ko00000,ko01000,ko01002	Domain of unknown function (DUF1949)
PHMJEDCH_03554	1.82e-229	yvhJ	-	-	K	-	-	-	Transcriptional regulator
PHMJEDCH_03555	8.94e-233	tagO	2.7.8.33, 2.7.8.35	-	M	ko:K02851	-	ko00000,ko01000,ko01003,ko01005	COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase UDP-N-acetylglucosamine-1-phosphate transferase
PHMJEDCH_03556	1.85e-284	tuaH	-	-	M	ko:K16699	-	ko00000,ko01000,ko01003	Teichuronic acid biosynthesis glycosyltransferase tuaH
PHMJEDCH_03557	2.22e-182	tuaG	-	GT2	M	ko:K16698	-	ko00000,ko01000,ko01003	Glycosyltransferase like family 2
PHMJEDCH_03558	8.08e-138	tuaF	-	-	M	ko:K16706	-	ko00000	protein involved in exopolysaccharide biosynthesis
PHMJEDCH_03559	8.4e-317	tuaE	-	-	M	ko:K16705	-	ko00000	Teichuronic acid biosynthesis protein
PHMJEDCH_03560	5.86e-310	tuaD	1.1.1.22	-	M	ko:K00012	ko00040,ko00053,ko00520,ko01100,map00040,map00053,map00520,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
PHMJEDCH_03561	2.76e-270	tuaC	-	GT4	GM	ko:K16697	-	ko00000,ko01000,ko01003	Teichuronic acid
PHMJEDCH_03562	0.0	tuaB	-	-	S	ko:K03328,ko:K16694,ko:K16695	-	ko00000,ko02000	COG2244 Membrane protein involved in the export of O-antigen and teichoic acid
PHMJEDCH_03563	8.51e-151	tuaA	-	-	M	-	-	-	COG2148 Sugar transferases involved in lipopolysaccharide synthesis
PHMJEDCH_03564	5.41e-269	lytC	3.5.1.28	-	M	ko:K01448	ko01503,map01503	ko00000,ko00001,ko00002,ko01000,ko01011,ko03036	n-acetylmuramoyl-L-alanine amidase
PHMJEDCH_03565	0.0	lytB	-	-	D	-	-	-	Stage II sporulation protein
PHMJEDCH_03566	1.99e-39	-	-	-	-	-	-	-	-
PHMJEDCH_03567	1.15e-179	lytR	-	-	K	-	-	-	May catalyze the final step in cell wall teichoic acid biosynthesis, the transfer of the anionic cell wall polymers (APs) from their lipid-linked precursor to the cell wall peptidoglycan (PG)
PHMJEDCH_03568	4.2e-235	mnaA	5.1.3.14	-	M	ko:K01791	ko00520,ko01100,ko05111,map00520,map01100,map05111	ko00000,ko00001,ko00002,ko01000,ko01005	Belongs to the UDP-N-acetylglucosamine 2-epimerase family
PHMJEDCH_03569	2.14e-200	gtaB	2.7.7.9	-	M	ko:K00963	ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	UTP-glucose-1-phosphate uridylyltransferase
PHMJEDCH_03570	1.55e-241	tagH	3.6.3.40	-	GM	ko:K09693	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex TagGH involved in teichoic acids export. Responsible for energy coupling to the transport system
PHMJEDCH_03571	7.77e-174	tagG	-	-	GM	ko:K09692	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Transport permease protein
PHMJEDCH_03572	0.0	tagF	2.7.8.12	-	M	ko:K09809	-	ko00000,ko01000	glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
PHMJEDCH_03573	7.41e-315	tagE	2.4.1.52	GT4	M	ko:K00712	-	ko00000,ko01000,ko01003	Glycosyl transferase 1 domain A
PHMJEDCH_03574	2.69e-91	tagD	2.7.7.39	-	IM	ko:K00980	ko00564,map00564	ko00000,ko00001,ko01000	Cytidylyltransferase
PHMJEDCH_03575	6.85e-179	tagA	2.4.1.187	GT26	M	ko:K05946	ko05111,map05111	ko00000,ko00001,ko01000,ko01003	Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
PHMJEDCH_03576	5.65e-258	tagB	2.7.8.44	-	M	ko:K21285	-	ko00000,ko01000	glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
PHMJEDCH_03577	2.3e-290	lytD	3.2.1.96	-	G	ko:K01227	ko00511,map00511	ko00000,ko00001,ko01000	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
PHMJEDCH_03578	9.82e-234	manA	5.3.1.8	-	G	ko:K01809	ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	mannose-6-phosphate isomerase
PHMJEDCH_03579	0.0	gerBA	-	-	EG	ko:K06288,ko:K06291,ko:K06310	-	ko00000	Spore germination protein
PHMJEDCH_03580	2.94e-243	gerBB	-	-	E	ko:K06289,ko:K06292	-	ko00000,ko02000	Spore germination protein
PHMJEDCH_03581	3.1e-218	gerBC	-	-	S	ko:K06290,ko:K06293,ko:K06312	-	ko00000	Spore germination protein
PHMJEDCH_03582	0.0	-	-	-	J	ko:K07011	-	ko00000	Glycosyl transferase family 2
PHMJEDCH_03583	9.98e-304	ywtG	-	-	U	ko:K02100,ko:K06609,ko:K08139	ko04113,map04113	ko00000,ko00001,ko02000	Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family
PHMJEDCH_03584	2.02e-223	ywtF_2	-	-	K	-	-	-	Transcriptional regulator
PHMJEDCH_03585	1.33e-195	ywtE	3.1.3.104	-	S	ko:K21064	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	hydrolases of the HAD superfamily
PHMJEDCH_03586	9.05e-59	yttA	-	-	S	-	-	-	Pfam Transposase IS66
PHMJEDCH_03587	6.5e-287	pgdS	-	-	M	-	-	-	COG0791 Cell wall-associated hydrolases (invasion-associated proteins)
PHMJEDCH_03588	1.16e-28	ywtC	-	-	-	-	-	-	-
PHMJEDCH_03589	7.41e-276	capA	-	-	M	ko:K07282	-	ko00000	enzyme of poly-gamma-glutamate biosynthesis (capsule formation)
PHMJEDCH_03590	6.66e-88	capC	-	-	S	ko:K22116	-	ko00000	biosynthesis protein
PHMJEDCH_03591	1.46e-283	capB	-	-	M	ko:K01932	-	ko00000,ko01000	COG0769 UDP-N-acetylmuramyl tripeptide synthase
PHMJEDCH_03592	3.48e-253	gerKA	-	-	EG	ko:K06295	-	ko00000	Spore germination protein
PHMJEDCH_03593	6.95e-228	-	-	-	E	-	-	-	Spore germination protein
PHMJEDCH_03594	9.16e-247	gerKC	-	-	S	-	-	-	Spore germination B3/ GerAC like, C-terminal
PHMJEDCH_03595	4.38e-221	rbsR	-	-	K	ko:K02529,ko:K03484	-	ko00000,ko03000	transcriptional
PHMJEDCH_03596	1.74e-195	rbsK	2.7.1.15	-	H	ko:K00852	ko00030,map00030	ko00000,ko00001,ko01000	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PHMJEDCH_03597	1.04e-80	rbsD	5.4.99.62	-	G	ko:K06726	ko02010,map02010	ko00000,ko00001,ko01000	Catalyzes the interconversion of beta-pyran and beta- furan forms of D-ribose
PHMJEDCH_03598	0.0	rbsA	3.6.3.17	-	G	ko:K10441	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system
PHMJEDCH_03599	1.21e-201	rbsC	-	-	G	ko:K10440	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
PHMJEDCH_03600	7.75e-205	rbsB	-	-	G	ko:K10439	ko02010,ko02030,map02010,map02030	ko00000,ko00001,ko00002,ko02000	COG1879 ABC-type sugar transport system, periplasmic component
PHMJEDCH_03601	5.4e-112	batE	-	-	T	-	-	-	Sh3 type 3 domain protein
PHMJEDCH_03602	2.88e-113	ywrO	-	-	S	-	-	-	NADPH-quinone reductase (modulator of drug activity B)
PHMJEDCH_03603	1.51e-186	budA	4.1.1.5	-	H	ko:K01575	ko00650,ko00660,map00650,map00660	ko00000,ko00001,ko01000	Alpha-acetolactate decarboxylase
PHMJEDCH_03604	0.0	alsS	2.2.1.6	-	EH	ko:K01652	ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the TPP enzyme family
PHMJEDCH_03605	6.98e-211	alsR	-	-	K	-	-	-	LysR substrate binding domain
PHMJEDCH_03606	5.9e-297	ywrK	-	-	P	ko:K03893	-	ko00000,ko02000	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
PHMJEDCH_03607	8.96e-150	ywrJ	-	-	-	-	-	-	-
PHMJEDCH_03608	4.38e-157	cotB	-	-	-	ko:K06325	-	ko00000	-
PHMJEDCH_03609	9.11e-261	cotH	-	-	M	ko:K06330	-	ko00000	Spore Coat
PHMJEDCH_03610	1.39e-09	-	-	-	-	-	-	-	-
PHMJEDCH_03611	3.45e-143	ywrF	-	-	S	-	-	-	COG1853 Conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
PHMJEDCH_03613	0.0	ywrD	2.3.2.2, 3.4.19.13	-	E	ko:K00681	ko00430,ko00460,ko00480,ko01100,map00430,map00460,map00480,map01100	ko00000,ko00001,ko01000,ko01002	gamma-glutamyltransferase
PHMJEDCH_03614	3.97e-107	ywrC	-	-	K	ko:K03719	-	ko00000,ko03000,ko03036	Transcriptional regulator
PHMJEDCH_03615	7.48e-126	ywrB	-	-	P	ko:K07240	-	ko00000,ko02000	Chromate transporter
PHMJEDCH_03616	2.03e-112	ywrA	-	-	P	ko:K07240	-	ko00000,ko02000	COG2059 Chromate transport protein ChrA
PHMJEDCH_03617	1.29e-130	-	-	-	-	-	-	-	-
PHMJEDCH_03618	7.15e-83	-	-	-	-	-	-	-	-
PHMJEDCH_03619	3.77e-97	-	-	-	S	ko:K21494	-	ko00000,ko02048	SMI1 / KNR4 family
PHMJEDCH_03620	1.92e-25	-	-	-	-	-	-	-	-
PHMJEDCH_03621	2.19e-75	-	-	-	S	-	-	-	SUKH-4 immunity protein
PHMJEDCH_03622	8.84e-288	ywqJ	-	-	S	-	-	-	Pre-toxin TG
PHMJEDCH_03623	1.59e-47	ywqI	-	-	S	-	-	-	Family of unknown function (DUF5344)
PHMJEDCH_03625	1.68e-182	ywqG	-	-	S	-	-	-	Domain of unknown function (DUF1963)
PHMJEDCH_03626	2.45e-304	ywqF	1.1.1.22	-	M	ko:K00012	ko00040,ko00053,ko00520,ko01100,map00040,map00053,map00520,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
PHMJEDCH_03627	6.3e-174	ywqE	3.1.3.48	-	GM	ko:K01104	-	ko00000,ko01000	COG4464 Capsular polysaccharide biosynthesis protein
PHMJEDCH_03628	3.37e-152	ywqD	2.7.10.2	-	D	ko:K00903	-	ko00000,ko01000,ko01001	COG0489 ATPases involved in chromosome partitioning
PHMJEDCH_03629	1.2e-143	ywqC	-	-	M	ko:K19420	-	ko00000	biosynthesis protein
PHMJEDCH_03630	3e-22	-	-	-	-	-	-	-	-
PHMJEDCH_03631	0.0	ywqB	-	-	S	-	-	-	SWIM zinc finger
PHMJEDCH_03632	0.0	ywqA	-	-	L	-	-	-	COG0553 Superfamily II DNA RNA helicases, SNF2 family
PHMJEDCH_03633	7.72e-195	ywpJ	3.1.3.104	-	S	ko:K21064	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	hydrolases of the HAD superfamily
PHMJEDCH_03634	5.39e-178	glcR	-	-	K	ko:K22103	-	ko00000,ko03000	DeoR C terminal sensor domain
PHMJEDCH_03635	4.94e-75	ssbB	-	-	L	ko:K03111	ko03030,ko03430,ko03440,map03030,map03430,map03440	ko00000,ko00001,ko03029,ko03032,ko03400	Single-stranded DNA-binding protein
PHMJEDCH_03636	1.83e-74	ywpG	-	-	-	-	-	-	-
PHMJEDCH_03637	1.79e-89	ywpF	-	-	S	-	-	-	YwpF-like protein
PHMJEDCH_03638	2.54e-72	mscL	-	-	M	ko:K03282	-	ko00000,ko02000	Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
PHMJEDCH_03639	3.15e-98	fabZ	4.2.1.59	-	I	ko:K02372	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
PHMJEDCH_03640	4.41e-247	rapD	-	-	S	ko:K06362	-	ko00000,ko01000	aspartate phosphatase
PHMJEDCH_03641	5.1e-176	flhP	-	-	N	ko:K02392	ko02040,map02040	ko00000,ko00001,ko02035	flagellar basal body
PHMJEDCH_03642	1.16e-170	flhO	-	-	N	ko:K02392	ko02040,map02040	ko00000,ko00001,ko02035	flagellar basal body
PHMJEDCH_03643	1.75e-231	mbl	-	-	D	ko:K03569	-	ko00000,ko02048,ko03036,ko04812	Rod shape-determining protein
PHMJEDCH_03644	5.93e-60	spoIIID	-	-	K	ko:K06283	-	ko00000,ko03000	Stage III sporulation protein D
PHMJEDCH_03645	5.3e-93	ywoH	-	-	K	-	-	-	transcriptional
PHMJEDCH_03646	3.92e-270	ywoG	-	-	EGP	-	-	-	COG0477 Permeases of the major facilitator superfamily
PHMJEDCH_03647	0.0	-	-	-	FH	ko:K03457,ko:K10975	-	ko00000,ko02000	COG1953 Cytosine uracil thiamine allantoin permeases
PHMJEDCH_03648	6.07e-141	ywoD	-	-	EGP	-	-	-	Major facilitator superfamily
PHMJEDCH_03649	2.05e-147	ywoD	-	-	EGP	-	-	-	Major facilitator superfamily
PHMJEDCH_03650	2.1e-128	yjgF	-	-	Q	-	-	-	Isochorismatase family
PHMJEDCH_03651	3.63e-289	nrgA	-	-	P	ko:K03320	-	ko00000,ko02000	Ammonium transporter
PHMJEDCH_03652	1.51e-75	nrgB	-	-	K	ko:K04751	ko02020,map02020	ko00000,ko00001	Belongs to the P(II) protein family
PHMJEDCH_03653	1.11e-262	ftsW	-	-	D	ko:K03588	ko04112,map04112	ko00000,ko00001,ko02000,ko03036	Belongs to the SEDS family
PHMJEDCH_03654	5.56e-130	bcrC	3.6.1.27	-	I	ko:K19302	ko00550,map00550	ko00000,ko00001,ko01000,ko01011	COG0671 Membrane-associated phospholipid phosphatase
PHMJEDCH_03655	3.41e-88	ywnJ	-	-	S	-	-	-	VanZ like family
PHMJEDCH_03656	1.17e-175	spoIIQ	-	-	M	ko:K06386	-	ko00000	COG0739 Membrane proteins related to metalloendopeptidases
PHMJEDCH_03657	7.6e-113	ywnH	2.3.1.183	-	M	ko:K03823	ko00440,ko01130,map00440,map01130	ko00000,ko00001,ko01000	COG1247 Sortase and related acyltransferases
PHMJEDCH_03659	2.45e-88	ywnF	-	-	S	-	-	-	Family of unknown function (DUF5392)
PHMJEDCH_03660	0.0	ywnE	-	-	I	ko:K06131	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PHMJEDCH_03661	1.12e-21	yqgA	-	-	-	-	-	-	-
PHMJEDCH_03662	1.33e-77	ywnC	-	-	S	-	-	-	Family of unknown function (DUF5362)
PHMJEDCH_03663	3.75e-116	ywnB	-	-	S	ko:K07118	-	ko00000	NAD(P)H-binding
PHMJEDCH_03664	3.09e-88	ywnA	-	-	K	-	-	-	Transcriptional regulator
PHMJEDCH_03665	0.0	ureC	3.5.1.5	-	E	ko:K01428	ko00220,ko00230,ko00791,ko01100,ko01120,ko05120,map00220,map00230,map00791,map01100,map01120,map05120	ko00000,ko00001,ko01000	Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family
PHMJEDCH_03666	4.37e-81	ureB	3.5.1.5	-	E	ko:K01429	ko00220,ko00230,ko00791,ko01100,ko01120,map00220,map00230,map00791,map01100,map01120	ko00000,ko00001,ko01000	Belongs to the urease beta subunit family
PHMJEDCH_03667	1.94e-66	ureA	3.5.1.5	-	E	ko:K01430	ko00220,ko00230,ko00791,ko01100,ko01120,map00220,map00230,map00791,map01100,map01120	ko00000,ko00001,ko01000	Belongs to the urease gamma subunit family
PHMJEDCH_03668	2.41e-16	csbD	-	-	K	-	-	-	CsbD-like
PHMJEDCH_03669	1.01e-105	ywmF	-	-	S	-	-	-	Peptidase M50
PHMJEDCH_03670	1.44e-114	rapA	-	-	S	ko:K06359,ko:K06360,ko:K06367	ko02024,map02024	ko00000,ko00001,ko01000	Response regulator aspartate phosphatase
PHMJEDCH_03671	2.09e-243	moaA	4.1.99.22	-	H	ko:K03639	ko00790,ko01100,ko04122,map00790,map01100,map04122	ko00000,ko00001,ko01000	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
PHMJEDCH_03672	2.91e-183	fdhD	-	-	C	ko:K02379	-	ko00000	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
PHMJEDCH_03674	2.79e-154	ywmD	-	-	S	ko:K07114	-	ko00000,ko02000	protein containing a von Willebrand factor type A (vWA) domain
PHMJEDCH_03675	4.74e-145	ywmC	-	-	S	ko:K07114	-	ko00000,ko02000	protein containing a von Willebrand factor type A (vWA) domain
PHMJEDCH_03676	6.86e-232	spoIID	-	-	D	ko:K06381	-	ko00000	Stage II sporulation protein D
PHMJEDCH_03677	1.85e-301	murA	2.5.1.7	-	M	ko:K00790	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PHMJEDCH_03678	1.27e-169	ywmB	-	-	S	-	-	-	TATA-box binding
PHMJEDCH_03679	1.85e-44	ywzB	-	-	S	-	-	-	membrane
PHMJEDCH_03680	1.98e-115	ywmA	-	-	-	-	-	-	-
PHMJEDCH_03681	3.36e-82	atpC	-	-	C	ko:K02114	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Produces ATP from ADP in the presence of a proton gradient across the membrane
PHMJEDCH_03682	0.0	atpD	3.6.3.14	-	C	ko:K02112	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko01000	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
PHMJEDCH_03683	1.1e-195	atpG	-	-	C	ko:K02115	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
PHMJEDCH_03684	0.0	atpA	3.6.3.14	-	C	ko:K02111	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko01000	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
PHMJEDCH_03685	1.13e-115	atpH	-	-	C	ko:K02113	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PHMJEDCH_03686	3.35e-82	atpF	-	-	C	ko:K02109	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
PHMJEDCH_03687	3.01e-36	atpE	-	-	C	ko:K02110	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PHMJEDCH_03688	5.19e-168	atpB	-	-	C	ko:K02108	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko03110	it plays a direct role in the translocation of protons across the membrane
PHMJEDCH_03689	4.49e-80	atpI	-	-	S	ko:K02116	-	ko00000,ko00194	ATP synthase
PHMJEDCH_03690	1.3e-146	upp	2.4.2.9	-	F	ko:K00761	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
PHMJEDCH_03691	5.69e-299	glyA	2.1.2.1	-	E	ko:K00600	ko00260,ko00460,ko00630,ko00670,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko01523,map00260,map00460,map00630,map00670,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map01523	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
PHMJEDCH_03692	3.53e-123	ywlG	-	-	S	-	-	-	Belongs to the UPF0340 family
PHMJEDCH_03693	7.57e-103	rpiB	5.3.1.6	-	G	ko:K01808	ko00030,ko00051,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00051,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Ribose 5-phosphate isomerase
PHMJEDCH_03694	1.84e-95	ywlE	3.1.3.48, 3.9.1.2	-	T	ko:K01104,ko:K20201	-	ko00000,ko01000	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
PHMJEDCH_03695	1.86e-116	mntP	-	-	P	-	-	-	Probably functions as a manganese efflux pump
PHMJEDCH_03696	1.34e-237	ywlC	2.7.7.87	-	J	ko:K07566	-	ko00000,ko01000,ko03009,ko03016	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
PHMJEDCH_03697	6.75e-96	ywlB	-	-	E	-	-	-	Belongs to the acetyltransferase family. ArgA subfamily
PHMJEDCH_03698	1.73e-148	spoIIR	-	-	S	ko:K06387	-	ko00000	stage II sporulation protein R
PHMJEDCH_03699	4.04e-77	ywlA	-	-	S	-	-	-	Uncharacterised protein family (UPF0715)
PHMJEDCH_03701	3.54e-196	prmC	2.1.1.297	-	J	ko:K02493	-	ko00000,ko01000,ko03012	Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
PHMJEDCH_03702	2.06e-240	prfA	-	-	J	ko:K02835	-	ko00000,ko03012	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
PHMJEDCH_03703	2.93e-85	ywkD	-	-	E	ko:K08234	-	ko00000	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PHMJEDCH_03704	2.52e-115	racA	-	-	K	ko:K11686	-	ko00000,ko03036	Required for the formation of axial filaments and for anchoring the origin regions at the cell poles in sporulating cells, thus ensuring proper chromosome segregation in the prespore. Binds in a dispersed manner throughout the chromosome but preferentially to sites clustered in the origin portion of the chromosome, causing condensation of the chromosome and its remodeling into an elongated, anchored structure
PHMJEDCH_03705	6.87e-194	ywkB	-	-	S	ko:K07088	-	ko00000	Membrane transport protein
PHMJEDCH_03706	0.0	ykwA	1.1.1.38	-	C	ko:K00027	ko00620,ko01200,ko02020,map00620,map01200,map02020	ko00000,ko00001,ko01000	malic enzyme
PHMJEDCH_03707	6.49e-131	tdk	2.7.1.21	-	F	ko:K00857	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	thymidine kinase
PHMJEDCH_03708	7e-45	rpmE	-	-	J	ko:K02909	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds the 23S rRNA
PHMJEDCH_03709	5.13e-304	rho	-	-	K	ko:K03628	ko03018,map03018	ko00000,ko00001,ko03019,ko03021	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
PHMJEDCH_03710	9.65e-223	glpX	3.1.3.11	-	G	ko:K02446	ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	fructose-1,6-bisphosphatase
PHMJEDCH_03711	1.59e-303	murA	2.5.1.7	-	M	ko:K00790	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PHMJEDCH_03712	3.69e-143	tal	2.2.1.2	-	G	ko:K00616	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
PHMJEDCH_03713	4.53e-203	fbaA	4.1.2.13, 4.1.2.29	-	G	ko:K01624,ko:K03339	ko00010,ko00030,ko00051,ko00562,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00562,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Aldolase
PHMJEDCH_03714	1.07e-81	spo0F	-	-	T	ko:K02490	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko02022	COG0784 FOG CheY-like receiver
PHMJEDCH_03715	1.84e-117	ywjG	-	-	S	-	-	-	Domain of unknown function (DUF2529)
PHMJEDCH_03716	0.0	pyrG	6.3.4.2	-	F	ko:K01937	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
PHMJEDCH_03717	1.53e-71	rpoE	-	-	K	ko:K03048	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko03021,ko03400	Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
PHMJEDCH_03718	0.0	ywjF	-	-	C	-	-	-	COG0247 Fe-S oxidoreductase
PHMJEDCH_03719	1.51e-263	clsB	-	-	I	ko:K06131	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Belongs to the phospholipase D family. Cardiolipin synthase subfamily
PHMJEDCH_03720	5.39e-224	uvsE	-	-	L	ko:K13281	-	ko00000,ko01000	Component in a DNA repair pathway. Removal of UV-light damaged nucleotides. Recognizes pyrimidine dimers and cleave a phosphodiester bond immediately 5' to the lesion
PHMJEDCH_03721	3.23e-58	ywjC	-	-	-	-	-	-	-
PHMJEDCH_03722	0.0	ywjA	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter
PHMJEDCH_03723	0.0	ywiE	-	-	I	ko:K06131	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PHMJEDCH_03724	1.61e-149	narI	1.7.5.1	-	C	ko:K00374	ko00910,ko01120,ko02020,map00910,map01120,map02020	ko00000,ko00001,ko00002,ko01000	Nitrate reductase (gamma
PHMJEDCH_03725	1.07e-110	narJ	-	-	C	ko:K00373	ko02020,map02020	ko00000,ko00001	nitrate reductase
PHMJEDCH_03726	0.0	narH	1.7.5.1	-	C	ko:K00371	ko00910,ko01120,ko02020,map00910,map01120,map02020	ko00000,ko00001,ko00002,ko01000	Nitrate reductase, beta
PHMJEDCH_03727	0.0	narG	1.7.5.1	-	C	ko:K00370	ko00910,ko01120,ko02020,map00910,map01120,map02020	ko00000,ko00001,ko00002,ko01000	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
PHMJEDCH_03728	8.63e-102	arfM	-	-	T	ko:K10914	ko02020,ko02024,ko02025,ko02026,ko05111,map02020,map02024,map02025,map02026,map05111	ko00000,ko00001,ko03000	cyclic nucleotide binding
PHMJEDCH_03729	8.59e-162	ywiC	-	-	S	-	-	-	YwiC-like protein
PHMJEDCH_03730	5.83e-162	fnr	-	-	K	-	-	-	helix_turn_helix, cAMP Regulatory protein
PHMJEDCH_03731	7.56e-267	narK	-	-	P	ko:K02575	ko00910,map00910	ko00000,ko00001,ko00002,ko02000	COG2223 Nitrate nitrite transporter
PHMJEDCH_03732	0.0	argS	6.1.1.19	-	J	ko:K01887	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Arginyl-tRNA synthetase
PHMJEDCH_03733	4.46e-94	ywiB	-	-	S	-	-	-	protein conserved in bacteria
PHMJEDCH_03735	1.55e-248	ywhL	-	-	CO	-	-	-	amine dehydrogenase activity
PHMJEDCH_03736	3.16e-102	rapA1	-	-	S	ko:K06359,ko:K06361	ko02024,map02024	ko00000,ko00001,ko01000	aspartate phosphatase
PHMJEDCH_03738	2.87e-213	speB	3.5.3.11	-	E	ko:K01480	ko00330,ko01100,map00330,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the arginase family
PHMJEDCH_03739	6.45e-203	speE	2.5.1.16	-	E	ko:K00797	ko00270,ko00330,ko00410,ko00480,ko01100,map00270,map00330,map00410,map00480,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
PHMJEDCH_03740	0.0	pbpG	2.4.1.129, 3.4.16.4	GT51	M	ko:K21464	ko00550,map00550	ko00000,ko00001,ko01000,ko01003,ko01011	penicillin-binding protein
PHMJEDCH_03741	1.96e-93	-	-	-	-	-	-	-	-
PHMJEDCH_03742	2.07e-116	ywhD	-	-	S	-	-	-	YwhD family
PHMJEDCH_03743	1.1e-152	ywhC	-	-	S	-	-	-	Peptidase family M50
PHMJEDCH_03744	2.37e-34	dmpI	5.3.2.6	-	G	ko:K01821	ko00362,ko00621,ko00622,ko01100,ko01120,ko01220,map00362,map00621,map00622,map01100,map01120,map01220	ko00000,ko00001,ko00002,ko01000	4-oxalocrotonate tautomerase
PHMJEDCH_03745	3.29e-90	ywhA	-	-	K	-	-	-	Transcriptional regulator
PHMJEDCH_03746	4.79e-307	potE5	-	-	E	ko:K03294	-	ko00000	C-terminus of AA_permease
PHMJEDCH_03747	1.37e-113	ywgA	-	-	-	ko:K09388	-	ko00000	-
PHMJEDCH_03748	0.0	ywfO	-	-	S	ko:K06885	-	ko00000	COG1078 HD superfamily phosphohydrolases
PHMJEDCH_03749	8.55e-49	ywzC	-	-	S	-	-	-	Belongs to the UPF0741 family
PHMJEDCH_03750	6.18e-139	rsfA_1	-	-	-	ko:K06314	-	ko00000,ko03000	-
PHMJEDCH_03752	7.34e-66	-	-	-	K	ko:K10947	-	ko00000,ko03000	PadR family transcriptional regulator
PHMJEDCH_03753	7.2e-109	-	-	-	S	-	-	-	membrane
PHMJEDCH_03754	1.29e-117	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PHMJEDCH_03755	4.46e-54	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PHMJEDCH_03756	1.75e-207	-	-	-	S	ko:K01992	-	ko00000,ko00002,ko02000	ABC transporter (permease)
PHMJEDCH_03759	6.53e-210	-	-	-	-	-	-	-	-
PHMJEDCH_03761	4.66e-197	lipL	2.3.1.200, 2.3.1.204	-	H	ko:K16869,ko:K18821	-	ko00000,ko01000	Catalyzes the amidotransfer (transamidation) of the octanoyl moiety from octanoyl-GcvH to the lipoyl domain of the E2 subunit of lipoate-dependent enzymes
PHMJEDCH_03762	6.57e-200	cysL	-	-	K	ko:K21900	-	ko00000,ko03000	Transcriptional regulator
PHMJEDCH_03763	6.26e-205	-	-	-	S	-	-	-	Conserved hypothetical protein 698
PHMJEDCH_03764	2.27e-222	pta	2.3.1.8, 3.6.3.21	-	C	ko:K00625,ko:K02028	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000,ko02000	In Salmonella this enzyme is required for ethanolamine catabolism
PHMJEDCH_03765	1.9e-184	ywfI	-	-	C	ko:K00435	ko00860,ko01100,ko01110,map00860,map01100,map01110	ko00000,ko00001,ko01000	May function as heme-dependent peroxidase
PHMJEDCH_03766	2.12e-179	ywfH	-	-	IQ	ko:K19550	ko01130,map01130	ko00000,ko00001,ko00002,ko01000	Enoyl-(Acyl carrier protein) reductase
PHMJEDCH_03767	1.6e-290	ywfG	-	-	E	ko:K08969,ko:K19549	ko00270,ko01100,ko01130,map00270,map01100,map01130	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase class I and II
PHMJEDCH_03768	8.14e-265	bacE	-	-	EGP	ko:K19552	-	ko00000,ko02000	Part of the bacilysin biosynthesis operon. May be involved in self-resistance to bacilysin by permitting efflux of this antibiotic
PHMJEDCH_03769	0.0	bacD	6.3.2.49	-	F	ko:K13037	ko01130,map01130	ko00000,ko00001,ko00002,ko01000	Part of the bacABCDEFG operon responsible for the biosynthesis of bacilysin, an irreversible inactivator of the glutaminase domain of glucosamine synthetase. Catalyzes the formation of alpha-dipeptides from various L-amino acids in the presence of ATP. In vivo catalyzes the ligation of L-alanine and L-anticapsin (epoxycyclohexanonyl-Ala) to produce the final bacilysin antibiotic (L-Ala-L-4S-cyclohexenonyl-Ala dipeptide)
PHMJEDCH_03770	2.21e-178	bacC	1.1.1.385	-	IQ	ko:K19548	ko01130,map01130	ko00000,ko00001,ko00002,ko01000	COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PHMJEDCH_03771	4.67e-174	bacB	5.3.3.19	-	S	ko:K19547	ko01130,map01130	ko00000,ko00001,ko00002,ko01000	Part of the bacABCDEF operon responsible for the biosynthesis of the nonribosomally synthesized dipeptide antibiotic bacilysin, composed of L-alanine and L-anticapsin. Bacilysin is an irreversible inactivator of the glutaminase domain of glucosamine synthetase. BacB catalyzes the allylic isomerization of the
PHMJEDCH_03772	4.49e-143	bacA	4.1.1.100	-	E	ko:K19546	ko01130,map01130	ko00000,ko00001,ko00002,ko01000	Part of the bacABCDEF operon responsible for the biosynthesis of the nonribosomally synthesized dipeptide antibiotic bacilysin, composed of L-alanine and L-anticapsin. Bacilysin is an irreversible inactivator of the glutaminase domain of glucosamine synthetase. BacA is an unusual prephenate decarboxylase that avoids the typical aromatization of the cyclohexadienol ring of prephenate. BacA catalyzes the protonation of prephenate (1-carboxy-4-hydroxy-alpha-oxo-2,5-cyclohexadiene-1- propanoic acid) at C6 position, followed by a decarboxylation to produce the endocyclic-delta(4),delta(8)-7R-dihydro- hydroxyphenylpyruvate (en-H2HPP). En-H2HPP is able to undergo a slow nonenzymatic isomerization to produce the exocyclic- delta(3),delta(5)-dihydro-hydroxyphenylpyruvate (ex-H2HPP). BacA isomerizes only the pro-R double bond in prephenate
PHMJEDCH_03773	1.14e-276	ywfA	-	-	EGP	-	-	-	-transporter
PHMJEDCH_03774	9.06e-238	tcaB	-	-	EGP	ko:K07552	-	ko00000,ko02000	-transporter
PHMJEDCH_03775	0.0	rocC	-	-	E	ko:K02205,ko:K16235,ko:K16236	-	ko00000,ko02000	amino acid
PHMJEDCH_03776	0.0	rocB	-	-	E	-	-	-	arginine degradation protein
PHMJEDCH_03777	0.0	rocA	1.2.1.88	-	C	ko:K00294	ko00250,ko00330,ko01100,map00250,map00330,map01100	ko00000,ko00001,ko01000	Belongs to the aldehyde dehydrogenase family. RocA subfamily
PHMJEDCH_03778	8.64e-312	rocG	1.4.1.2	-	E	ko:K00260	ko00220,ko00250,ko00430,ko00910,ko01100,map00220,map00250,map00430,map00910,map01100	ko00000,ko00001,ko01000	Belongs to the Glu Leu Phe Val dehydrogenases family
PHMJEDCH_03779	4.02e-80	-	-	-	-	-	-	-	-
PHMJEDCH_03780	2.6e-109	spsL	5.1.3.13	-	M	ko:K01790	ko00521,ko00523,ko01130,map00521,map00523,map01130	ko00000,ko00001,ko00002,ko01000	Spore Coat
PHMJEDCH_03781	1.7e-201	rfbD	1.1.1.133	-	M	ko:K00067	ko00521,ko00523,ko01130,map00521,map00523,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
PHMJEDCH_03782	1.09e-225	spsJ	4.2.1.46	-	M	ko:K01710	ko00521,ko00523,ko00525,ko01055,ko01130,map00521,map00523,map00525,map01055,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
PHMJEDCH_03783	4.12e-170	spsI	2.7.7.24	-	M	ko:K00973	ko00521,ko00523,ko00525,ko01130,map00521,map00523,map00525,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
PHMJEDCH_03784	1.49e-212	spsG	-	-	M	-	-	-	Spore Coat
PHMJEDCH_03785	2.62e-158	spsF	-	-	M	ko:K07257	-	ko00000	Spore Coat
PHMJEDCH_03786	2.84e-264	pseI	2.5.1.56, 2.5.1.97	-	M	ko:K01654,ko:K15898	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	acid synthase
PHMJEDCH_03787	6.34e-195	spsD	2.3.1.210	-	K	ko:K16704	-	ko00000,ko01000	Spore Coat
PHMJEDCH_03788	5.44e-277	spsC	2.6.1.102	-	E	ko:K13010	ko00520,map00520	ko00000,ko00001,ko01000,ko01005,ko01007	Belongs to the DegT DnrJ EryC1 family
PHMJEDCH_03789	0.0	spsB	-	-	M	-	-	-	Capsule polysaccharide biosynthesis protein
PHMJEDCH_03790	4.13e-180	spsA	-	-	M	-	-	-	Spore Coat
PHMJEDCH_03791	1.29e-83	gerQ	-	-	S	ko:K06305	-	ko00000	Essential for the localization of CwlJ in the spore coat and for spore germination triggered by calcium and dipicolinic acid (DPA). Its assembly into the spore coat is dependent on the coat morphogenetic proteins CotE and SpoIVA
PHMJEDCH_03792	4.39e-76	ywdK	-	-	S	-	-	-	small membrane protein
PHMJEDCH_03793	8.52e-288	ywdJ	-	-	F	-	-	-	Xanthine uracil
PHMJEDCH_03794	2.73e-56	ywdI	-	-	S	-	-	-	Family of unknown function (DUF5327)
PHMJEDCH_03795	2.42e-169	ung	3.2.2.27	-	L	ko:K03648	ko03410,ko05340,map03410,map05340	ko00000,ko00001,ko01000,ko03400	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
PHMJEDCH_03796	1.44e-186	ywdF	-	-	S	-	-	-	Glycosyltransferase like family 2
PHMJEDCH_03798	2.79e-185	pdxK	2.7.1.35, 2.7.1.49, 2.7.4.7	-	H	ko:K00868,ko:K00941	ko00730,ko00750,ko01100,map00730,map00750,map01100	ko00000,ko00001,ko00002,ko01000	Phosphomethylpyrimidine kinase
PHMJEDCH_03799	6.09e-27	ywdA	-	-	-	-	-	-	-
PHMJEDCH_03800	0.0	sacA	3.2.1.26	GH32	G	ko:K01193	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	invertase
PHMJEDCH_03801	9.04e-317	sacP	2.7.1.211	-	G	ko:K02809,ko:K02810	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
PHMJEDCH_03802	1.29e-193	sacT	-	-	K	ko:K03488	-	ko00000,ko03000	transcriptional antiterminator
PHMJEDCH_03804	0.0	prtS	3.4.21.110, 3.4.21.96	-	O	ko:K01361,ko:K08652,ko:K14647	ko02024,map02024	ko00000,ko00001,ko01000,ko01002,ko03110	Belongs to the peptidase S8 family
PHMJEDCH_03805	1.83e-233	ywcH	-	-	C	-	-	-	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
PHMJEDCH_03806	1.26e-150	-	-	-	K	-	-	-	WYL domain
PHMJEDCH_03807	8.59e-162	ucpA	-	-	IQ	-	-	-	Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PHMJEDCH_03808	4.61e-56	-	-	-	S	-	-	-	Ketosteroid isomerase-related protein
PHMJEDCH_03809	1.36e-39	-	-	-	S	-	-	-	PFAM Stress responsive alpha-beta barrel
PHMJEDCH_03810	1.1e-176	nfrA1	1.5.1.38	-	C	ko:K19285	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	Oxidoreductase
PHMJEDCH_03811	1.84e-262	rodA	-	-	D	ko:K05837	-	ko00000,ko03036	Belongs to the SEDS family
PHMJEDCH_03812	1.68e-87	ysnE	-	-	K	ko:K03829	-	ko00000,ko01000	acetyltransferase
PHMJEDCH_03813	2.54e-51	ywcE	-	-	S	-	-	-	Required for proper spore morphogenesis. Important for spore germination
PHMJEDCH_03814	1.08e-80	qoxD	1.10.3.12	-	C	ko:K02829	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	quinol oxidase, subunit
PHMJEDCH_03815	2.84e-143	qoxC	1.10.3.12	-	C	ko:K02828	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	quinol oxidase, subunit
PHMJEDCH_03816	0.0	qoxB	1.10.3.12	-	C	ko:K02827	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
PHMJEDCH_03817	3.01e-226	qoxA	1.10.3.12	-	C	ko:K02826	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes quinol oxidation with the concomitant reduction of oxygen to water. Subunit II transfers the electrons from a quinol to the binuclear center of the catalytic subunit I
PHMJEDCH_03818	5.74e-48	ydaS	-	-	S	-	-	-	membrane
PHMJEDCH_03819	0.0	galT	2.7.7.12	-	G	ko:K00965	ko00052,ko00520,ko01100,ko04917,map00052,map00520,map01100,map04917	ko00000,ko00001,ko00002,ko01000	UDP-glucose--hexose-1-phosphate uridylyltransferase
PHMJEDCH_03820	1.52e-265	galK	2.7.1.6	-	G	ko:K00849	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
PHMJEDCH_03821	7.8e-78	gtcA	-	-	S	-	-	-	GtrA-like protein
PHMJEDCH_03822	1.72e-125	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PHMJEDCH_03824	6.64e-162	-	-	-	H	-	-	-	Methionine biosynthesis protein MetW
PHMJEDCH_03825	4.83e-154	-	-	-	S	-	-	-	Streptomycin biosynthesis protein StrF
PHMJEDCH_03826	6.45e-138	ywbO	-	-	Q	-	-	-	dithiol-disulfide isomerase involved in polyketide biosynthesis
PHMJEDCH_03827	9.8e-297	ywbN	-	-	P	ko:K07223,ko:K16301	-	ko00000,ko01000,ko02000	Dyp-type peroxidase family protein
PHMJEDCH_03828	5.83e-191	ycdO	-	-	P	ko:K07224	-	ko00000,ko02000	periplasmic lipoprotein involved in iron transport
PHMJEDCH_03829	2.41e-246	-	-	-	P	ko:K07243	-	ko00000,ko02000	COG0672 High-affinity Fe2 Pb2 permease
PHMJEDCH_03830	2.72e-139	thiE	2.5.1.3	-	H	ko:K00788	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)
PHMJEDCH_03831	2.45e-164	thiM	2.7.1.50	-	H	ko:K00878	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
PHMJEDCH_03832	2.29e-200	ywbI	-	-	K	-	-	-	Transcriptional regulator
PHMJEDCH_03833	9.02e-76	ywbH	-	-	S	ko:K06518	-	ko00000,ko02000	Increases the activity of extracellular murein hydrolases possibly by mediating their export via hole formation. Inhibited by the antiholin-like proteins LrgAB. In an unstressed cell, the LrgAB products probably inhibit the function of the CidA protein. When a cell is stressed by the addition of antibiotics or by other factors in the environment, CidA possibly oligomerizes within the bacterial cell membrane, creating lesions that disrupt the proton motive force, which in turn results in loss of cell viability. These lesions are also hypothesized to regulate the subsequent cell lysis by either allowing the murein hydrolases access to the cell wall substrate and or regulating their activity by a
PHMJEDCH_03834	6.2e-142	ywbG	-	-	M	-	-	-	effector of murein hydrolase
PHMJEDCH_03835	1.52e-36	ywbE	-	-	S	-	-	-	Uncharacterized conserved protein (DUF2196)
PHMJEDCH_03836	2.16e-164	mta	-	-	K	ko:K21743	-	ko00000,ko03000	transcriptional
PHMJEDCH_03837	1.97e-200	yjfC	-	-	O	-	-	-	Predicted Zn-dependent protease (DUF2268)
PHMJEDCH_03838	4.69e-281	ywbD	2.1.1.191	-	J	ko:K06969	-	ko00000,ko01000,ko03009	Methyltransferase
PHMJEDCH_03839	1.24e-86	ywbC	4.4.1.5	-	E	ko:K01759	ko00620,map00620	ko00000,ko00001,ko01000	glyoxalase
PHMJEDCH_03840	8.3e-309	licC	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PHMJEDCH_03841	0.0	epr	3.4.21.62	-	O	ko:K01342,ko:K13277	ko02024,map02024	ko00000,ko00001,ko01000,ko01002,ko03110	Belongs to the peptidase S8 family
PHMJEDCH_03842	2.87e-205	gspA	-	-	M	-	-	-	General stress
PHMJEDCH_03844	2.16e-150	ywaC	2.7.6.5	-	S	ko:K00951,ko:K07816	ko00230,map00230	ko00000,ko00001,ko01000	protein conserved in bacteria
PHMJEDCH_03845	7.25e-213	menA	2.5.1.74	-	H	ko:K02548	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01006	Belongs to the MenA family. Type 1 subfamily
PHMJEDCH_03846	3.51e-18	-	-	-	S	-	-	-	D-Ala-teichoic acid biosynthesis protein
PHMJEDCH_03847	0.0	dltA	6.1.1.13	-	Q	ko:K03367	ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01000,ko01504	Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PHMJEDCH_03848	2.45e-289	dltB	-	-	M	ko:K03739	ko01503,ko02020,ko05150,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01504	membrane protein involved in D-alanine export
PHMJEDCH_03849	1.96e-49	dltC	6.1.1.13	-	IQ	ko:K14188	ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01000,ko01504	Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PHMJEDCH_03850	3.02e-244	dltD	-	-	M	ko:K03740	ko01503,ko02020,ko05150,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01504	COG3966 Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
PHMJEDCH_03851	1.29e-259	ilvE	2.6.1.42	-	E	ko:K00826	ko00270,ko00280,ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00270,map00280,map00290,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Branched-chain amino acid aminotransferase
PHMJEDCH_03852	4.7e-316	licH	3.2.1.86	GT4	G	ko:K01222	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	COG1486 Alpha-galactosidases 6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases
PHMJEDCH_03853	1.89e-64	licA	2.7.1.196, 2.7.1.205, 2.7.1.207	-	G	ko:K02759,ko:K02786	ko00052,ko00500,ko01100,ko02060,map00052,map00500,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
PHMJEDCH_03854	1.19e-312	licC	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PHMJEDCH_03855	3.67e-65	licB	2.7.1.196, 2.7.1.205	-	G	ko:K02760	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	transporter subunit IIB
PHMJEDCH_03856	0.0	licR	-	-	GKT	ko:K03491	-	ko00000,ko03000	Mga helix-turn-helix domain
PHMJEDCH_03857	4.07e-139	yxlJ	3.2.2.21	-	L	ko:K03652	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Belongs to the DNA glycosylase MPG family
PHMJEDCH_03858	7.43e-217	-	-	-	P	ko:K02015	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PHMJEDCH_03859	9.33e-229	-	-	-	P	ko:K02015	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PHMJEDCH_03860	8.85e-212	cbrA3	-	-	P	ko:K02016	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Periplasmic binding protein
PHMJEDCH_03861	1.06e-66	arsR	-	-	K	ko:K03892,ko:K22043	-	ko00000,ko03000	transcriptional
PHMJEDCH_03862	1.16e-286	arsB	-	-	P	ko:K03893	-	ko00000,ko02000	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
PHMJEDCH_03863	3.25e-64	ydhM	2.7.1.196, 2.7.1.205	-	G	ko:K02760	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
PHMJEDCH_03864	1.26e-62	ydhN3	2.7.1.196, 2.7.1.205	-	G	ko:K02759	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
PHMJEDCH_03865	1.84e-298	celB	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PHMJEDCH_03866	0.0	ydhP	3.2.1.21, 3.2.1.85, 3.2.1.86	GT1	G	ko:K01220,ko:K01223,ko:K05350	ko00010,ko00052,ko00460,ko00500,ko00940,ko01100,ko01110,map00010,map00052,map00460,map00500,map00940,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
PHMJEDCH_03867	7.52e-206	gmuE	2.7.1.4	-	GK	ko:K00847	ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100	ko00000,ko00001,ko01000	COG1940 Transcriptional regulator sugar kinase
PHMJEDCH_03868	1.05e-227	manA	5.3.1.8	-	G	ko:K01809	ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	mannose-6-phosphate isomerase
PHMJEDCH_03869	3.3e-261	ydhT1	3.2.1.78	GH26	G	ko:K01218	ko00051,ko02024,map00051,map02024	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 26 family
PHMJEDCH_03870	0.0	katX	1.11.1.6	-	P	ko:K03781	ko00380,ko00630,ko01110,ko01130,ko01200,ko04011,ko04016,ko04068,ko04146,ko04211,ko04212,ko04213,ko05014,map00380,map00630,map01110,map01130,map01200,map04011,map04016,map04068,map04146,map04211,map04212,map04213,map05014	ko00000,ko00001,ko00002,ko01000	serves to protect cells from the toxic effects of hydrogen peroxide
PHMJEDCH_03871	2.33e-238	yxeI	3.5.1.24	-	M	ko:K01442	ko00120,ko00121,ko01100,map00120,map00121,map01100	ko00000,ko00001,ko01000	Linear amide C-N hydrolases, choloylglycine hydrolase family
PHMJEDCH_03872	8.74e-315	yxlA	-	-	F	ko:K03457	-	ko00000	Belongs to the purine-cytosine permease (2.A.39) family
PHMJEDCH_03873	3.54e-191	nnrD	4.2.1.136, 5.1.99.6	-	G	ko:K17758,ko:K17759	-	ko00000,ko01000	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
PHMJEDCH_03874	0.0	cydD	-	-	V	ko:K16012	ko02010,map02010	ko00000,ko00001,ko02000	ATP-binding protein
PHMJEDCH_03875	0.0	cydC	-	-	V	ko:K16013	ko02010,map02010	ko00000,ko00001,ko02000	ATP-binding
PHMJEDCH_03876	5.08e-238	cydB	1.10.3.14	-	C	ko:K00426	ko00190,ko01100,ko02020,map00190,map01100,map02020	ko00000,ko00001,ko00002,ko01000	Cytochrome d ubiquinol oxidase, subunit II
PHMJEDCH_03877	0.0	cydA	1.10.3.14	-	C	ko:K00425	ko00190,ko01100,ko02020,map00190,map01100,map02020	ko00000,ko00001,ko00002,ko01000	oxidase, subunit
PHMJEDCH_03878	1.02e-283	cimH	-	-	C	-	-	-	COG3493 Na citrate symporter
PHMJEDCH_03879	2.39e-191	yxkH	-	-	G	-	-	-	Polysaccharide deacetylase
PHMJEDCH_03880	3.56e-259	msmX	-	-	P	ko:K10112	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
PHMJEDCH_03881	1.49e-198	lrp	-	-	QT	-	-	-	PucR C-terminal helix-turn-helix domain
PHMJEDCH_03882	4.82e-190	yxkD	-	-	S	-	-	-	Uncharacterised 5xTM membrane BCR, YitT family COG1284
PHMJEDCH_03884	6.7e-114	yxkC	-	-	S	-	-	-	Domain of unknown function (DUF4352)
PHMJEDCH_03885	7.02e-245	galE	5.1.3.2	-	M	ko:K01784	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the NAD(P)-dependent epimerase dehydratase family
PHMJEDCH_03886	5.24e-297	pepT	3.4.11.4	-	E	ko:K01258	-	ko00000,ko01000,ko01002	Cleaves the N-terminal amino acid of tripeptides
PHMJEDCH_03889	3.81e-105	yxjI	-	-	S	-	-	-	LURP-one-related
PHMJEDCH_03890	3.36e-270	yxjG	2.1.1.14	-	E	ko:K00549	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Methionine synthase
PHMJEDCH_03891	2.83e-185	yxjB	2.1.1.187	-	Q	ko:K00563	-	ko00000,ko01000,ko03009	Methyltransferase domain
PHMJEDCH_03892	2.49e-262	nupG	-	-	F	ko:K16323	-	ko00000,ko02000	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
PHMJEDCH_03893	1.64e-113	-	-	-	T	-	-	-	Domain of unknown function (DUF4163)
PHMJEDCH_03894	3.23e-60	yxiS	-	-	-	-	-	-	-
PHMJEDCH_03895	3.04e-221	-	-	-	L	-	-	-	DNA synthesis involved in DNA repair
PHMJEDCH_03896	0.0	katE	1.11.1.6	-	P	ko:K03781	ko00380,ko00630,ko01110,ko01130,ko01200,ko04011,ko04016,ko04068,ko04146,ko04211,ko04212,ko04213,ko05014,map00380,map00630,map01110,map01130,map01200,map04011,map04016,map04068,map04146,map04211,map04212,map04213,map05014	ko00000,ko00001,ko00002,ko01000	serves to protect cells from the toxic effects of hydrogen peroxide
PHMJEDCH_03897	1.57e-281	citH	-	-	C	ko:K03300,ko:K11639	ko02020,map02020	ko00000,ko00001	Citrate transporter
PHMJEDCH_03898	9.73e-176	bglS	-	-	M	-	-	-	licheninase activity
PHMJEDCH_03899	2.11e-183	licT	-	-	K	ko:K03488	-	ko00000,ko03000	transcriptional antiterminator
PHMJEDCH_03900	7.88e-277	yxiO	-	-	S	ko:K06902	ko04138,map04138	ko00000,ko00001,ko02000,ko04131	COG2270 Permeases of the major facilitator superfamily
PHMJEDCH_03901	0.0	dbpA	3.6.4.13	-	JKL	ko:K05592	ko03018,map03018	ko00000,ko00001,ko01000,ko03009,ko03019	DEAD-box RNA helicase involved in the assembly of the 50S ribosomal subunit. Has an RNA-dependent ATPase activity, which is specific for 23S rRNA, and a 3' to 5' RNA helicase activity that uses the energy of ATP hydrolysis to destabilize and unwind short rRNA duplexes
PHMJEDCH_03903	9.75e-27	-	-	-	-	-	-	-	-
PHMJEDCH_03905	2.79e-140	-	-	-	-	-	-	-	-
PHMJEDCH_03906	4.23e-103	-	-	-	-	-	-	-	-
PHMJEDCH_03907	2.91e-85	yxiG	-	-	-	-	-	-	-
PHMJEDCH_03908	9.79e-75	yxxG	-	-	-	-	-	-	-
PHMJEDCH_03910	4.8e-251	pelB	4.2.2.10, 4.2.2.2	-	G	ko:K01728,ko:K01732	ko00040,ko02024,map00040,map02024	ko00000,ko00001,ko01000	Pectate lyase
PHMJEDCH_03911	7.42e-202	yxxF	-	-	EG	-	-	-	EamA-like transporter family
PHMJEDCH_03912	2.44e-94	yxiE	-	-	T	-	-	-	Belongs to the universal stress protein A family
PHMJEDCH_03913	0.0	bglH	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
PHMJEDCH_03914	0.0	bglP	-	-	G	ko:K02755,ko:K02756,ko:K02757	ko02060,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
PHMJEDCH_03915	1.51e-61	-	-	-	L	ko:K07458	-	ko00000,ko01000,ko03400	May nick specific sequences that contain T G mispairs resulting from m5C-deamination
PHMJEDCH_03916	8.04e-176	-	2.1.1.37	-	L	ko:K00558	ko00270,ko01100,ko05206,map00270,map01100,map05206	ko00000,ko00001,ko00002,ko01000,ko02048,ko03032,ko03036	C-5 cytosine-specific DNA methylase
PHMJEDCH_03917	3.55e-204	-	-	-	L	-	-	-	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
PHMJEDCH_03918	7.34e-294	-	-	-	L	-	-	-	Z1 domain
PHMJEDCH_03919	1.59e-12	-	-	-	L	-	-	-	Z1 domain
PHMJEDCH_03920	7.49e-103	-	-	-	S	-	-	-	Putative PD-(D/E)XK family member, (DUF4420)
PHMJEDCH_03921	7.27e-51	-	-	-	S	-	-	-	AIPR protein
PHMJEDCH_03922	3.56e-147	-	-	-	S	-	-	-	AIPR protein
PHMJEDCH_03923	0.0	yxiA	3.2.1.99	GH43	G	ko:K06113	-	ko00000,ko01000	Belongs to the glycosyl hydrolase 43 family
PHMJEDCH_03924	4.06e-102	hutP	-	-	K	ko:K09683	-	ko00000,ko03000	Antiterminator that binds to cis-acting regulatory sequences on the mRNA in the presence of histidine, thereby suppressing transcription termination and activating the hut operon for histidine utilization
PHMJEDCH_03925	0.0	hutH	4.3.1.3	-	E	ko:K01745	ko00340,ko01100,map00340,map01100	ko00000,ko00001,ko00002,ko01000	Histidine ammonia-lyase
PHMJEDCH_03926	0.0	hutU	4.2.1.49	-	E	ko:K01712	ko00340,ko01100,map00340,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
PHMJEDCH_03927	1.88e-291	hutI	3.5.2.7	-	Q	ko:K01468	ko00340,ko01100,map00340,map01100	ko00000,ko00001,ko00002,ko01000	Imidazolone-5-propionate hydrolase
PHMJEDCH_03928	6.73e-216	hutG	3.5.3.8	-	E	ko:K01479	ko00340,ko01100,map00340,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of N-formimidoyl-L-glutamate to L-glutamate and formamide
PHMJEDCH_03929	0.0	hutM	-	-	E	ko:K02205,ko:K16235,ko:K16236	-	ko00000,ko02000	amino acid
PHMJEDCH_03930	2.59e-295	pdp	2.4.2.2	-	F	ko:K00756	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	phosphorylase
PHMJEDCH_03931	2.33e-264	nupC	-	-	F	ko:K11535	-	ko00000,ko02000	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
PHMJEDCH_03932	4.09e-145	deoC	4.1.2.4	-	F	ko:K01619	ko00030,map00030	ko00000,ko00001,ko01000	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
PHMJEDCH_03933	9.22e-217	deoR	-	-	K	ko:K05346	-	ko00000,ko03000	COG2390 Transcriptional regulator, contains sigma factor-related N-terminal domain
PHMJEDCH_03934	1.75e-188	yxeH	-	-	S	-	-	-	hydrolases of the HAD superfamily
PHMJEDCH_03937	9.45e-26	yxeE	-	-	-	-	-	-	-
PHMJEDCH_03939	9.67e-33	yxeD	-	-	-	-	-	-	-
PHMJEDCH_03940	4.86e-47	-	-	-	-	-	-	-	-
PHMJEDCH_03941	6.74e-218	fhuD	-	-	P	ko:K02016	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Periplasmic binding protein
PHMJEDCH_03942	2.25e-72	yxeA	-	-	S	-	-	-	Protein of unknown function (DUF1093)
PHMJEDCH_03943	0.0	yxdM	-	-	V	ko:K11636	ko02020,map02020	ko00000,ko00001,ko00002,ko02000	ABC transporter (permease)
PHMJEDCH_03944	7.1e-177	yxdL	-	-	V	ko:K11635	ko02020,map02020	ko00000,ko00001,ko00002,ko02000	ABC transporter, ATP-binding protein
PHMJEDCH_03945	9.27e-223	yxdK	2.7.13.3	-	T	ko:K11633	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
PHMJEDCH_03946	6.33e-157	yxdJ	-	-	T	ko:K11634	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PHMJEDCH_03947	1.61e-194	fbaA	4.1.2.13, 4.1.2.29	-	F	ko:K01624,ko:K03339	ko00010,ko00030,ko00051,ko00562,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00562,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Produces dihydroxyacetone phosphate (DHAP or glycerone phosphate) and malonic semialdehyde (MSA or 3-oxopropanoate) from 6-phospho-5-dehydro-2-deoxy-D-gluconate (DKGP)
PHMJEDCH_03948	4.68e-198	iolI	5.3.99.11	-	G	ko:K06606	ko00562,ko01120,map00562,map01120	ko00000,ko00001,ko01000	Involved in the reversible interconverion of 2-keto-myo- inositol (2KMI, inosose or 2,4,6 3,5-pentahydroxycyclohexanone) to 1-keto-D-chiro-inositol (1KDCI or 2,3,5 4,6- pentahydroxycyclohexanone)
PHMJEDCH_03949	4.92e-209	iolH	-	-	G	ko:K06605	-	ko00000	Xylose isomerase-like TIM barrel
PHMJEDCH_03950	2.36e-246	iolG	1.1.1.18, 1.1.1.369	-	S	ko:K00010	ko00521,ko00562,ko01100,ko01120,ko01130,map00521,map00562,map01100,map01120,map01130	ko00000,ko00001,ko01000	Involved in the oxidation of myo-inositol (MI) and D- chiro-inositol (DCI) to 2-keto-myo-inositol (2KMI or 2-inosose) and 1-keto-D-chiro-inositol (1KDCI), respectively
PHMJEDCH_03951	2.76e-289	iolF	-	-	EGP	ko:K06610	-	ko00000,ko02000	Major facilitator superfamily
PHMJEDCH_03952	1.73e-218	iolE	4.2.1.44	-	H	ko:K03335	ko00562,ko01100,ko01120,map00562,map01100,map01120	ko00000,ko00001,ko01000	Catalyzes the dehydration of inosose (2-keto-myo- inositol, 2KMI or 2,4,6 3,5-pentahydroxycyclohexanone) to 3D- (3,5 4)-trihydroxycyclohexane-1,2-dione (D-2,3-diketo-4-deoxy-epi- inositol)
PHMJEDCH_03953	0.0	iolD	3.7.1.22	-	E	ko:K03336	ko00562,ko01100,ko01120,map00562,map01100,map01120	ko00000,ko00001,ko01000	Involved in the cleavage of the C1-C2 bond of 3D- (3,5 4)-trihydroxycyclohexane-1,2-dione (THcHDO) to yield 5-deoxy- glucuronate (5DG)
PHMJEDCH_03954	3.5e-225	iolC	2.7.1.92	-	G	ko:K03338	ko00562,ko01100,ko01120,map00562,map01100,map01120	ko00000,ko00001,ko01000	Catalyzes the phosphorylation of 5-dehydro-2-deoxy-D- gluconate (2-deoxy-5-keto-D-gluconate or DKG) to 6-phospho-5- dehydro-2-deoxy-D-gluconate (DKGP)
PHMJEDCH_03955	1.11e-196	iolB	5.3.1.30	-	G	ko:K03337	ko00562,ko01100,ko01120,map00562,map01100,map01120	ko00000,ko00001,ko01000	Involved in the isomerization of 5-deoxy-glucuronate (5DG) to 5-dehydro-2-deoxy-D-gluconate (DKG or 2-deoxy-5-keto-D- gluconate)
PHMJEDCH_03956	0.0	iolA	1.2.1.18, 1.2.1.27	-	C	ko:K00140	ko00280,ko00410,ko00562,ko00640,ko01100,ko01200,map00280,map00410,map00562,map00640,map01100,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of malonate semialdehyde (MSA) and methylmalonate semialdehyde (MMSA) into acetyl-CoA and propanoyl-CoA, respectively
PHMJEDCH_03957	1.75e-174	iolR	-	-	K	ko:K06608,ko:K11534	-	ko00000,ko03000	COG1349 Transcriptional regulators of sugar metabolism
PHMJEDCH_03958	1.26e-217	iolS	-	-	C	ko:K06607	-	ko00000,ko01000	Aldo keto reductase
PHMJEDCH_03959	2.13e-311	csbC	-	-	U	ko:K02100,ko:K06609,ko:K08139	ko04113,map04113	ko00000,ko00001,ko02000	Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family
PHMJEDCH_03960	0.0	htpG	-	-	O	ko:K04079	ko04141,ko04151,ko04217,ko04612,ko04621,ko04626,ko04657,ko04659,ko04914,ko04915,ko05200,ko05215,ko05418,map04141,map04151,map04217,map04612,map04621,map04626,map04657,map04659,map04914,map04915,map05200,map05215,map05418	ko00000,ko00001,ko01009,ko03029,ko03051,ko03110,ko04131,ko04147	Molecular chaperone. Has ATPase activity
PHMJEDCH_03961	6.33e-188	yxbG	-	-	IQ	-	-	-	Enoyl-(Acyl carrier protein) reductase
PHMJEDCH_03962	2.06e-129	desR	-	-	T	ko:K07693	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
PHMJEDCH_03963	1.35e-244	desK	2.7.13.3	-	T	ko:K07778	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
PHMJEDCH_03964	4.24e-247	des	1.14.19.23, 1.14.19.45	-	I	ko:K10255	ko02020,map02020	ko00000,ko00001,ko01000,ko01004	fatty acid desaturase
PHMJEDCH_03965	1.78e-264	yxbF	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PHMJEDCH_03966	4.85e-313	aldX	1.2.1.3	-	C	ko:K00128	ko00010,ko00053,ko00071,ko00280,ko00310,ko00330,ko00340,ko00380,ko00410,ko00561,ko00620,ko00625,ko00903,ko00981,ko01100,ko01110,ko01120,ko01130,map00010,map00053,map00071,map00280,map00310,map00330,map00340,map00380,map00410,map00561,map00620,map00625,map00903,map00981,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the aldehyde dehydrogenase family
PHMJEDCH_03967	2.12e-185	yxaL	-	-	S	-	-	-	PQQ-like domain
PHMJEDCH_03968	8.25e-75	-	-	-	S	-	-	-	Family of unknown function (DUF5391)
PHMJEDCH_03969	2.01e-66	arsR3	-	-	K	-	-	-	helix_turn_helix, Arsenical Resistance Operon Repressor
PHMJEDCH_03970	9.97e-252	-	-	-	EGP	-	-	-	Major Facilitator Superfamily
PHMJEDCH_03971	3.67e-86	yxaI	-	-	S	-	-	-	membrane protein domain
PHMJEDCH_03972	3.12e-152	-	-	-	E	-	-	-	Ring-cleavage extradiol dioxygenase
PHMJEDCH_03973	1.55e-134	ahpC	1.11.1.15	-	O	ko:K03386	ko04214,map04214	ko00000,ko00001,ko01000,ko04147	Alkyl hydroperoxide reductase
PHMJEDCH_03974	0.0	ahpF	-	-	O	ko:K03387	-	ko00000,ko01000	Alkyl hydroperoxide reductase
PHMJEDCH_03975	7.69e-229	mrjp	-	-	G	-	-	-	Major royal jelly protein
PHMJEDCH_03976	1.78e-301	aapA	-	-	E	ko:K03293,ko:K11737	-	ko00000,ko02000	COG1113 Gamma-aminobutyrate permease and related permeases
PHMJEDCH_03977	2.75e-201	-	-	-	K	-	-	-	helix_turn_helix, Deoxyribose operon repressor
PHMJEDCH_03978	8.87e-97	-	-	-	K	-	-	-	Integron-associated effector binding protein
PHMJEDCH_03979	1.81e-97	yjhE	-	-	S	-	-	-	Phage tail protein
PHMJEDCH_03980	0.0	fbp	3.1.3.11	-	G	ko:K04041	ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Firmicute fructose-1,6-bisphosphatase
PHMJEDCH_03981	9.27e-101	pucE	1.2.5.3	-	C	ko:K03518	-	ko00000,ko01000	COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS CutS homologs
PHMJEDCH_03982	2.98e-185	-	-	-	C	-	-	-	COG1319 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM CutM homologs
PHMJEDCH_03983	0.0	-	-	-	C	-	-	-	COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL CutL homologs
PHMJEDCH_03984	7.29e-105	pucB	1.17.1.4, 2.7.7.76	-	S	ko:K00087,ko:K07141	ko00230,ko00790,ko01100,ko01120,map00230,map00790,map01100,map01120	ko00000,ko00001,ko00002,ko01000	MobA-like NTP transferase domain
PHMJEDCH_03985	5.41e-213	pucA	1.17.1.4	-	O	ko:K00087,ko:K07402	ko00230,ko01100,ko01120,map00230,map01100,map01120	ko00000,ko00001,ko00002,ko01000	COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
PHMJEDCH_03986	1.86e-208	-	-	-	S	-	-	-	Fusaric acid resistance protein-like
PHMJEDCH_03987	6.58e-27	-	-	-	-	-	-	-	-
PHMJEDCH_03988	1.41e-245	-	-	-	L	-	-	-	AAA domain
PHMJEDCH_03989	7.74e-48	-	-	-	L	-	-	-	AAA domain
PHMJEDCH_03990	9.5e-40	-	-	-	L	-	-	-	AAA domain
PHMJEDCH_03991	0.0	-	-	-	L	-	-	-	AAA ATPase domain
PHMJEDCH_03992	1.01e-105	rlmH	2.1.1.177	-	J	ko:K00783	-	ko00000,ko01000,ko03009	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
PHMJEDCH_03996	5.96e-264	yycP	-	-	-	-	-	-	-
PHMJEDCH_03997	1.54e-167	yycO	-	-	S	-	-	-	Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family
PHMJEDCH_03998	3.13e-226	-	-	-	C	-	-	-	oxidoreductases (related to aryl-alcohol dehydrogenases)
PHMJEDCH_03999	2.13e-106	yycN	-	-	K	-	-	-	Acetyltransferase
PHMJEDCH_04001	2.05e-256	-	-	-	S	ko:K06361,ko:K06365,ko:K06366	ko02024,map02024	ko00000,ko00001,ko01000	Histidine kinase
PHMJEDCH_04002	7.27e-210	rocF	3.5.3.1	-	E	ko:K01476	ko00220,ko00330,ko01100,ko01110,ko01130,ko01230,ko05146,map00220,map00330,map01100,map01110,map01130,map01230,map05146	ko00000,ko00001,ko00002,ko01000	Belongs to the arginase family
PHMJEDCH_04003	0.0	rocE	-	-	E	ko:K02205,ko:K16235,ko:K16236	-	ko00000,ko02000	amino acid
PHMJEDCH_04004	1.75e-295	rocD	2.6.1.13	-	E	ko:K00819	ko00330,ko01100,ko01110,ko01130,map00330,map01100,map01110,map01130	ko00000,ko00001,ko01000,ko01007	Catalyzes the interconversion of ornithine to glutamate semialdehyde
PHMJEDCH_04005	1.26e-85	yvaZ	-	-	S	-	-	-	Immunity protein that provides protection for the cell against the toxic effects of SDP, its own SdpC-derived killing factor, and that functions as a receptor signal transduction protein as well. Once SDP accumulates in the extracellular milieu, SdpI binds to SDP, causing sequestration of SdpR at the bacterial membrane
PHMJEDCH_04006	9.03e-56	sdpR	-	-	K	-	-	-	transcriptional
PHMJEDCH_04007	0.0	rocR	-	-	KT	ko:K06714	-	ko00000,ko03000	COG3829 Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains
PHMJEDCH_04008	8.24e-255	-	-	-	S	-	-	-	Major Facilitator Superfamily
PHMJEDCH_04009	5.41e-310	-	2.7.13.3	-	T	ko:K02484	-	ko00000,ko01000,ko01001,ko02022	COG0642 Signal transduction histidine kinase
PHMJEDCH_04010	3.35e-119	-	-	-	K	ko:K02483	-	ko00000,ko02022	PFAM response regulator receiver
PHMJEDCH_04011	6.88e-86	-	-	-	S	-	-	-	Peptidase propeptide and YPEB domain
PHMJEDCH_04012	1.37e-270	yyxA	3.4.21.107	-	O	ko:K04771	ko01503,ko02020,map01503,map02020	ko00000,ko00001,ko00002,ko01000,ko01002,ko03110	COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
PHMJEDCH_04013	4.01e-191	vicX	3.1.26.11	-	S	ko:K00784	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I
PHMJEDCH_04014	9e-191	yycI	-	-	S	-	-	-	protein conserved in bacteria
PHMJEDCH_04015	0.0	yycH	-	-	S	-	-	-	protein conserved in bacteria
PHMJEDCH_04016	0.0	vicK	2.7.13.3	-	T	ko:K07652	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
PHMJEDCH_04017	1.51e-172	yycF	-	-	T	ko:K07668	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PHMJEDCH_04022	1.78e-143	purA	6.3.4.4	-	F	ko:K01939	ko00230,ko00250,ko01100,map00230,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
PHMJEDCH_04023	3.2e-38	purA	6.3.4.4	-	F	ko:K01939	ko00230,ko00250,ko01100,map00230,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
PHMJEDCH_04024	2.92e-69	yycE	-	-	E	-	-	-	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PHMJEDCH_04025	0.0	dnaB	3.6.4.12	-	L	ko:K02314	ko03030,ko04112,map03030,map04112	ko00000,ko00001,ko01000,ko03032	Participates in initiation and elongation during chromosome replication
PHMJEDCH_04026	9e-38	yycD	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2188)
PHMJEDCH_04028	3.6e-25	yycC	-	-	K	-	-	-	YycC-like protein
PHMJEDCH_04029	3.86e-271	-	-	-	M	-	-	-	Glycosyltransferase Family 4
PHMJEDCH_04030	5.54e-244	-	-	-	S	-	-	-	Ecdysteroid kinase
PHMJEDCH_04031	2.11e-293	-	-	-	S	-	-	-	Carbamoyl-phosphate synthase L chain, ATP binding domain
PHMJEDCH_04032	1.37e-279	-	-	-	M	-	-	-	Glycosyltransferase Family 4
PHMJEDCH_04033	3.43e-154	-	-	-	S	-	-	-	GlcNAc-PI de-N-acetylase
PHMJEDCH_04034	1.92e-106	-	-	-	KLT	-	-	-	COG0515 Serine threonine protein kinase
PHMJEDCH_04035	1.85e-94	rplI	-	-	J	ko:K02939	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	binds to the 23S rRNA
PHMJEDCH_04036	0.0	yybT	-	-	T	-	-	-	signaling protein consisting of a modified GGDEF domain and a DHH domain
PHMJEDCH_04037	9.03e-191	yybS	-	-	S	-	-	-	membrane
PHMJEDCH_04039	1.7e-104	cotF	-	-	M	ko:K06329	-	ko00000	Spore coat protein
PHMJEDCH_04040	2.54e-84	yybR	-	-	K	-	-	-	Transcriptional regulator
PHMJEDCH_04041	4.01e-209	ppaC	3.6.1.1	-	C	ko:K15986	ko00190,map00190	ko00000,ko00001,ko01000	Inorganic pyrophosphatase
PHMJEDCH_04042	1.8e-191	ypaH	-	-	EG	-	-	-	COG0697 Permeases of the drug metabolite transporter (DMT) superfamily
PHMJEDCH_04043	0.0	sacB	2.4.1.10, 2.4.1.9	GH68	M	ko:K00692,ko:K20811	ko00500,ko01100,ko02020,map00500,map01100,map02020	ko00000,ko00001,ko01000,ko01003	levansucrase activity
PHMJEDCH_04044	0.0	sacC3	3.2.1.65	GH32	G	ko:K01212	ko00500,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 32 family
PHMJEDCH_04045	4.59e-143	-	-	-	K	-	-	-	FCD domain
PHMJEDCH_04046	6.2e-112	-	-	-	S	-	-	-	PFAM DinB family protein
PHMJEDCH_04047	4.82e-185	-	-	-	G	-	-	-	Major Facilitator Superfamily
PHMJEDCH_04048	3.76e-72	ypaA	-	-	S	ko:K08987	-	ko00000	Protein of unknown function (DUF1304)
PHMJEDCH_04049	1.56e-144	ydgI	-	-	C	-	-	-	nitroreductase
PHMJEDCH_04050	1.79e-85	-	-	-	K	-	-	-	Winged helix DNA-binding domain
PHMJEDCH_04051	7.02e-190	ydeO	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2179)
PHMJEDCH_04052	1.78e-97	yybA	-	-	K	-	-	-	transcriptional
PHMJEDCH_04053	1.65e-91	yjcF	-	-	S	-	-	-	Acetyltransferase (GNAT) domain
PHMJEDCH_04054	7.09e-101	-	-	-	S	-	-	-	DinB superfamily
PHMJEDCH_04055	0.0	ydfD	-	-	K	ko:K18907	-	ko00000,ko00002,ko01504,ko03000	COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
PHMJEDCH_04056	2.31e-174	-	-	-	EG	-	-	-	EamA-like transporter family
PHMJEDCH_04057	6.96e-33	yyaL	-	-	O	ko:K06888	-	ko00000	COG1331 Highly conserved protein containing a thioredoxin domain
PHMJEDCH_04058	7.54e-124	-	-	-	L	-	-	-	Reverse transcriptase (RNA-dependent DNA polymerase)
PHMJEDCH_04059	0.0	yyaL	-	-	O	ko:K06888	-	ko00000	COG1331 Highly conserved protein containing a thioredoxin domain
PHMJEDCH_04060	1.66e-193	yyaK	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
PHMJEDCH_04061	2.8e-311	-	-	-	G	ko:K08369	-	ko00000,ko02000	Sugar (and other) transporter
PHMJEDCH_04062	9.47e-86	yyaH	4.4.1.5	-	E	ko:K01759	ko00620,map00620	ko00000,ko00001,ko01000	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PHMJEDCH_04063	7.31e-218	ccpB	-	-	K	-	-	-	Transcriptional regulator
PHMJEDCH_04064	2.49e-179	exoA	3.1.11.2	-	L	ko:K01142	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	exodeoxyribonuclease III
PHMJEDCH_04065	6.58e-112	adaB	2.1.1.63	-	L	ko:K00567,ko:K10778,ko:K13531	-	ko00000,ko01000,ko03000,ko03400	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
PHMJEDCH_04066	3.59e-123	adaA	-	-	K	ko:K13530	-	ko00000,ko01000,ko03000,ko03400	Transcriptional regulator
PHMJEDCH_04067	1.11e-49	rpsR	-	-	J	ko:K02963	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
PHMJEDCH_04068	1.37e-98	ssb	-	-	L	ko:K03111	ko03030,ko03430,ko03440,map03030,map03430,map03440	ko00000,ko00001,ko03029,ko03032,ko03400	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
PHMJEDCH_04069	3.39e-60	rpsF	-	-	J	ko:K02990	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Binds together with S18 to 16S ribosomal RNA
PHMJEDCH_04070	6.32e-253	ychF	-	-	J	ko:K06942	-	ko00000,ko03009	ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
PHMJEDCH_04071	0.0	yyaE	-	-	C	-	-	-	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
PHMJEDCH_04072	1.82e-45	yyzM	-	-	S	-	-	-	protein conserved in bacteria
PHMJEDCH_04073	5.45e-215	yyaD	-	-	S	-	-	-	Membrane
PHMJEDCH_04074	1.25e-72	yhhY	-	-	K	-	-	-	FR47-like protein
PHMJEDCH_04075	1.3e-139	yyaC	-	-	S	-	-	-	Sporulation protein YyaC
PHMJEDCH_04076	6.79e-188	spo0J	-	-	K	ko:K03497	-	ko00000,ko03000,ko03036,ko04812	Belongs to the ParB family
PHMJEDCH_04077	2.38e-173	soj	-	-	D	ko:K03496	-	ko00000,ko03036,ko04812	COG1192 ATPases involved in chromosome partitioning
PHMJEDCH_04078	1.1e-193	noc	-	-	D	ko:K03497	-	ko00000,ko03000,ko03036,ko04812	Effects nucleoid occlusion by binding relatively nonspecifically to DNA and preventing the assembly of the division machinery in the vicinity of the nucleoid, especially under conditions that disturb the cell cycle. It helps to coordinate cell division and chromosome segregation by preventing the formation of the Z ring through the nucleoid, which would cause chromosome breakage
PHMJEDCH_04079	2.56e-161	rsmG	2.1.1.170	-	J	ko:K03501	-	ko00000,ko01000,ko03009,ko03036	Specifically methylates the N7 position of guanine in position 535 of 16S rRNA
PHMJEDCH_04080	0.0	gidA	-	-	D	ko:K03495	-	ko00000,ko03016,ko03036	NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
PHMJEDCH_04081	0.0	mnmE	-	-	S	ko:K03650	-	ko00000,ko01000,ko03016	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
PHMJEDCH_04082	7.08e-137	jag	-	-	S	ko:K06346	-	ko00000	single-stranded nucleic acid binding R3H
PHMJEDCH_04083	6.08e-179	yidC	-	-	U	ko:K03217	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044,ko03029	Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PHMJEDCH_04084	1.84e-67	rnpA	3.1.26.5	-	J	ko:K03536	-	ko00000,ko01000,ko03016	RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme