ORF_ID e_value Gene_name EC_number CAZy COGs KEGG_ko KEGG_Pathway BRITE Description
LDDHDPMB_00001 0.0 dnaA - - L ko:K02313 ko02020,ko04112,map02020,map04112 ko00000,ko00001,ko03032,ko03036 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
LDDHDPMB_00002 7.9e-263 dnaN 2.7.7.7 - L ko:K02338 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
LDDHDPMB_00003 0.0 recF - - L ko:K03629 ko03440,map03440 ko00000,ko00001,ko03400 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
LDDHDPMB_00004 2.35e-117 - - - S - - - Protein of unknown function (DUF721)
LDDHDPMB_00005 0.0 gyrB 5.99.1.3 - L ko:K02470 - ko00000,ko01000,ko03032,ko03400 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
LDDHDPMB_00006 0.0 gyrA 5.99.1.3 - L ko:K02469 - ko00000,ko01000,ko03032,ko03400 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
LDDHDPMB_00007 2.65e-108 - - - S - - - Transmembrane domain of unknown function (DUF3566)
LDDHDPMB_00008 3.27e-279 - - - V - - - VanZ like family
LDDHDPMB_00009 3.88e-207 - - - S ko:K11068 - ko00000,ko02042 Haemolysin-III related
LDDHDPMB_00010 0.0 gdhA 1.4.1.4 - E ko:K00262 ko00220,ko00250,ko00910,ko01100,map00220,map00250,map00910,map01100 ko00000,ko00001,ko01000 Belongs to the Glu Leu Phe Val dehydrogenases family
LDDHDPMB_00011 4.42e-307 - - - EGP - - - Transporter major facilitator family protein
LDDHDPMB_00012 6.85e-218 - 3.2.1.78 GH26 G ko:K01218 ko00051,ko02024,map00051,map02024 ko00000,ko00001,ko01000 Glycosyl hydrolase family 26
LDDHDPMB_00013 1.39e-95 mscL - - M ko:K03282 - ko00000,ko02000 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
LDDHDPMB_00014 3.45e-68 gcs2 - - S ko:K06048 - ko00000,ko01000 A circularly permuted ATPgrasp
LDDHDPMB_00017 4.87e-187 - - - S ko:K07043 - ko00000 Protein of unknown function DUF45
LDDHDPMB_00018 2.87e-101 - - - - - - - -
LDDHDPMB_00019 6.65e-198 - 3.6.4.12 - K ko:K03655 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Putative ATP-dependent DNA helicase recG C-terminal
LDDHDPMB_00020 0.0 uvrA3 - - L ko:K03701 ko03420,map03420 ko00000,ko00001,ko03400 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
LDDHDPMB_00021 2.44e-191 - - - Q - - - ubiE/COQ5 methyltransferase family
LDDHDPMB_00022 1.79e-214 - - - - - - - -
LDDHDPMB_00023 5.12e-139 - - - S ko:K19784 - ko00000 NADPH-dependent FMN reductase
LDDHDPMB_00024 5.46e-136 - - - - - - - -
LDDHDPMB_00025 3.27e-25 - - - - - - - -
LDDHDPMB_00028 2.13e-75 - - - S - - - MazG-like family
LDDHDPMB_00029 1.15e-31 - - - L ko:K09384 - ko00000 Uncharacterized conserved protein (DUF2075)
LDDHDPMB_00031 2.53e-243 - 2.1.1.37 - H ko:K00558 ko00270,ko01100,ko05206,map00270,map01100,map05206 ko00000,ko00001,ko00002,ko01000,ko02048,ko03032,ko03036 C-5 cytosine-specific DNA methylase
LDDHDPMB_00032 2.61e-60 - - - S - - - Type II restriction endonuclease EcoO109I
LDDHDPMB_00033 0.0 - - - - - - - -
LDDHDPMB_00034 1.94e-143 - - - - - - - -
LDDHDPMB_00035 0.0 - - - - - - - -
LDDHDPMB_00036 0.0 - - - - - - - -
LDDHDPMB_00037 1.06e-52 - - - S ko:K19157 - ko00000,ko01000,ko02048 Bacterial toxin of type II toxin-antitoxin system, YafQ
LDDHDPMB_00038 5.7e-30 - - - K - - - SpoVT / AbrB like domain
LDDHDPMB_00039 1.01e-86 - - - T ko:K07171 - ko00000,ko01000,ko02048 Toxic component of a toxin-antitoxin (TA) module
LDDHDPMB_00040 1.46e-210 - - - K - - - Bacterial regulatory helix-turn-helix protein, lysR family
LDDHDPMB_00041 1.14e-30 akr5f 1.1.1.346 - S ko:K06221 - ko00000,ko01000 reductase
LDDHDPMB_00042 6.38e-154 - 1.1.1.346 - S ko:K06221 - ko00000,ko01000 Aldo/keto reductase family
LDDHDPMB_00043 0.0 bglB 3.2.1.21 GH3 G ko:K05349 ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110 ko00000,ko00001,ko01000 Glycosyl hydrolase family 3 N-terminal domain protein
LDDHDPMB_00044 4.75e-110 - 2.7.1.95 - F ko:K00897 - ko00000,ko01000,ko01504 Phosphotransferase enzyme family
LDDHDPMB_00045 1.13e-26 - 2.7.1.95 - F ko:K00897 - ko00000,ko01000,ko01504 Phosphotransferase enzyme family
LDDHDPMB_00046 1.92e-115 - - - S - - - Domain of unknown function (DUF4234)
LDDHDPMB_00047 0.0 tnpA - - L - - - Transposase
LDDHDPMB_00048 0.0 - 3.2.1.45 GH30 G ko:K01201 ko00511,ko00600,ko01100,ko04142,map00511,map00600,map01100,map04142 ko00000,ko00001,ko01000 Glycosyl hydrolase family 30 TIM-barrel domain
LDDHDPMB_00049 0.0 - 3.2.1.23 - G ko:K12308 ko00052,map00052 ko00000,ko00001,ko01000 Beta-galactosidase trimerisation domain
LDDHDPMB_00050 7.41e-289 - - - G - - - MFS/sugar transport protein
LDDHDPMB_00051 9.15e-158 - - - K - - - Bacterial regulatory proteins, tetR family
LDDHDPMB_00052 1.87e-111 dps - - P ko:K04047 - ko00000,ko03036 Belongs to the Dps family
LDDHDPMB_00053 4.68e-314 - - - P ko:K03699 - ko00000,ko02042 Transporter associated domain
LDDHDPMB_00054 3.01e-165 cah 4.2.1.1 - P ko:K01673 ko00910,map00910 ko00000,ko00001,ko01000 Reversible hydration of carbon dioxide
LDDHDPMB_00055 7.3e-275 - - - K - - - helix_turn _helix lactose operon repressor
LDDHDPMB_00056 1.3e-48 - - - - - - - -
LDDHDPMB_00057 3.58e-213 - 3.6.3.17 - G ko:K02056,ko:K10545 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ATPases associated with a variety of cellular activities
LDDHDPMB_00058 1.59e-71 - - - - - - - -
LDDHDPMB_00059 2.57e-250 - - - K - - - helix_turn _helix lactose operon repressor
LDDHDPMB_00060 0.0 - 3.2.1.55 GH51 G ko:K01209 ko00520,map00520 ko00000,ko00001,ko01000 arabinose metabolic process
LDDHDPMB_00061 0.0 araB - - G - - - FGGY family of carbohydrate kinases, C-terminal domain
LDDHDPMB_00062 1.14e-166 araD 5.1.3.4 - G ko:K03077 ko00040,ko00053,ko01100,ko01120,map00040,map00053,map01100,map01120 ko00000,ko00001,ko00002,ko01000 Class II Aldolase and Adducin N-terminal domain
LDDHDPMB_00063 0.0 araA 5.3.1.4 - G ko:K01804 ko00040,ko01100,map00040,map01100 ko00000,ko00001,ko01000 Catalyzes the conversion of L-arabinose to L-ribulose
LDDHDPMB_00064 4.08e-216 - - - S - - - Oxidoreductase, aldo keto reductase family protein
LDDHDPMB_00065 0.0 ppc 4.1.1.31 - H ko:K01595 ko00620,ko00680,ko00710,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00710,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
LDDHDPMB_00066 0.0 - - - S - - - Threonine/Serine exporter, ThrE
LDDHDPMB_00067 0.0 tnpA - - L - - - Transposase
LDDHDPMB_00068 2.9e-264 trpS 6.1.1.2 - J ko:K01867 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the class-I aminoacyl-tRNA synthetase family
LDDHDPMB_00069 1.4e-66 - - - S - - - Protein of unknown function (DUF3073)
LDDHDPMB_00070 3.73e-104 - - - I - - - Sterol carrier protein
LDDHDPMB_00071 0.0 glgP 2.4.1.1 GT35 G ko:K00688 ko00500,ko01100,ko01110,ko02026,ko04217,ko04910,ko04922,ko04931,map00500,map01100,map01110,map02026,map04217,map04910,map04922,map04931 ko00000,ko00001,ko01000 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
LDDHDPMB_00072 9.18e-49 - - - - - - - -
LDDHDPMB_00073 1.76e-164 gluP 3.4.21.105 - S ko:K19225 - ko00000,ko01000,ko01002 Rhomboid family
LDDHDPMB_00074 0.0 - - - L - - - ribosomal rna small subunit methyltransferase
LDDHDPMB_00075 2.13e-46 crgA - - D - - - Involved in cell division
LDDHDPMB_00076 1.4e-177 - - - S - - - Bacterial protein of unknown function (DUF881)
LDDHDPMB_00077 1.07e-285 srtB 3.4.22.70 - M ko:K07284 - ko00000,ko01000,ko01002,ko01011 Sortase family
LDDHDPMB_00078 7.93e-156 trpG 2.6.1.85, 4.1.3.27 - EH ko:K01658,ko:K01664 ko00400,ko00405,ko00790,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00400,map00405,map00790,map01100,map01110,map01130,map01230,map02024,map02025 ko00000,ko00001,ko00002,ko01000 para-aminobenzoate synthase glutamine amidotransferase component II
LDDHDPMB_00079 0.0 pknB 2.7.11.1 - KLT ko:K08884,ko:K12132 - ko00000,ko01000,ko01001 Protein tyrosine kinase
LDDHDPMB_00080 1.37e-248 pknA 2.7.11.1 - T ko:K08884,ko:K12132 - ko00000,ko01000,ko01001 Protein tyrosine kinase
LDDHDPMB_00081 0.0 pbpA - - M ko:K05364 ko00550,map00550 ko00000,ko00001,ko01011 penicillin-binding protein
LDDHDPMB_00082 0.0 rodA - - D ko:K03588 ko04112,map04112 ko00000,ko00001,ko02000,ko03036 Belongs to the SEDS family
LDDHDPMB_00083 0.0 pstP 3.1.3.16 - T ko:K20074 - ko00000,ko01000,ko01009 Sigma factor PP2C-like phosphatases
LDDHDPMB_00084 2.44e-94 fhaB - - T - - - Inner membrane component of T3SS, cytoplasmic domain
LDDHDPMB_00085 1.83e-167 fhaA - - T - - - Protein of unknown function (DUF2662)
LDDHDPMB_00086 0.0 pepX 3.4.14.5 - E ko:K01278 ko04974,map04974 ko00000,ko00001,ko01000,ko01002,ko04090,ko04147 Dipeptidyl peptidase IV (DPP IV) N-terminal region
LDDHDPMB_00087 5.05e-161 - - - EG - - - EamA-like transporter family
LDDHDPMB_00088 1.54e-271 pldB 3.1.1.5 - I ko:K01048 ko00564,map00564 ko00000,ko00001,ko01000 Serine aminopeptidase, S33
LDDHDPMB_00089 3.36e-77 - - - - - - - -
LDDHDPMB_00090 1.39e-229 rrmA 2.1.1.187 - Q ko:K00563 - ko00000,ko01000,ko03009 Methyltransferase domain
LDDHDPMB_00091 4.12e-47 - - - S - - - Transglycosylase associated protein
LDDHDPMB_00092 4.74e-48 - - - S - - - Transglycosylase associated protein
LDDHDPMB_00094 0.0 fprA 1.18.1.2, 1.19.1.1 - C ko:K00528 - ko00000,ko01000 Pyridine nucleotide-disulphide oxidoreductase
LDDHDPMB_00095 0.0 - 3.6.3.4, 3.6.3.54 - P ko:K01533,ko:K17686 ko01524,ko04016,map01524,map04016 ko00000,ko00001,ko01000 E1-E2 ATPase
LDDHDPMB_00096 0.0 degP - - O ko:K08372 ko02020,map02020 ko00000,ko00001,ko01000,ko01002 Domain present in PSD-95, Dlg, and ZO-1/2.
LDDHDPMB_00097 6.47e-149 - 3.8.1.2 - S ko:K01560 ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120 ko00000,ko00001,ko01000 Haloacid dehalogenase-like hydrolase
LDDHDPMB_00098 0.0 - - - S ko:K07126 - ko00000 Sel1-like repeats.
LDDHDPMB_00099 0.0 tgt 2.4.2.29 - F ko:K00773 - ko00000,ko01000,ko03016 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
LDDHDPMB_00101 1.98e-232 htpX - - O ko:K03799 - ko00000,ko00002,ko01000,ko01002 Belongs to the peptidase M48B family
LDDHDPMB_00102 6.74e-271 - - - V - - - Beta-lactamase
LDDHDPMB_00103 8.61e-158 - - - E - - - SOS response associated peptidase (SRAP)
LDDHDPMB_00104 4.63e-293 - - - EGP ko:K08156,ko:K19577 - ko00000,ko02000 Major Facilitator Superfamily
LDDHDPMB_00105 2.14e-14 - - - S - - - NADPH-dependent FMN reductase
LDDHDPMB_00106 8.74e-69 - - - L ko:K07473 - ko00000,ko02048 RelB antitoxin
LDDHDPMB_00107 2.39e-113 ogt 2.1.1.63 - L ko:K00567,ko:K07443 - ko00000,ko01000,ko03400 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
LDDHDPMB_00108 0.0 - - - S - - - cellulose binding
LDDHDPMB_00109 1.87e-181 - 4.1.1.44 - S ko:K01607 ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220 ko00000,ko00001,ko01000 Carboxymuconolactone decarboxylase family
LDDHDPMB_00110 1.13e-111 - 4.1.1.44 - S ko:K01607 ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220 ko00000,ko00001,ko01000 Cupin domain
LDDHDPMB_00111 2.08e-244 - - - S ko:K06889 - ko00000 Dienelactone hydrolase family
LDDHDPMB_00112 5.51e-206 - - - K - - - Bacterial regulatory helix-turn-helix protein, lysR family
LDDHDPMB_00113 1.43e-250 - 1.1.1.91 - C ko:K05882 - ko00000,ko01000 Aldo/keto reductase family
LDDHDPMB_00114 2.27e-05 - - - I - - - acetylesterase activity
LDDHDPMB_00115 0.0 - - - P - - - nitric oxide dioxygenase activity
LDDHDPMB_00116 1.47e-120 - - - C - - - Flavodoxin
LDDHDPMB_00117 1.47e-51 - - - K - - - helix_turn_helix, mercury resistance
LDDHDPMB_00118 1.97e-111 - - - C - - - Flavodoxin
LDDHDPMB_00119 3.29e-189 - - - GM - - - NmrA-like family
LDDHDPMB_00120 7.83e-262 adh 1.1.1.1 - C ko:K00001 ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220 ko00000,ko00001,ko01000 Zinc-binding dehydrogenase
LDDHDPMB_00121 2.86e-213 - - - K - - - LysR substrate binding domain
LDDHDPMB_00122 0.0 - 3.2.1.8, 3.5.1.104 - G ko:K01181,ko:K22278 - ko00000,ko01000 Polysaccharide deacetylase
LDDHDPMB_00123 8.45e-249 fbaA 4.1.2.13 - G ko:K01624 ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Fructose-bisphosphate aldolase class-II
LDDHDPMB_00124 0.0 purA 6.3.4.4 - F ko:K01939 ko00230,ko00250,ko01100,map00230,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
LDDHDPMB_00125 3.73e-224 crcB - - U ko:K06199 - ko00000,ko02000 Important for reducing fluoride concentration in the cell, thus reducing its toxicity
LDDHDPMB_00126 7.85e-84 crcB - - U ko:K06199 - ko00000,ko02000 Important for reducing fluoride concentration in the cell, thus reducing its toxicity
LDDHDPMB_00127 2.82e-306 - - - U ko:K01997,ko:K11956 ko02010,ko02024,map02010,map02024 ko00000,ko00001,ko00002,ko02000 Belongs to the binding-protein-dependent transport system permease family
LDDHDPMB_00128 6.84e-210 livM - - U ko:K01998 ko02010,ko02024,map02010,map02024 ko00000,ko00001,ko00002,ko02000 Belongs to the binding-protein-dependent transport system permease family
LDDHDPMB_00129 1.67e-202 - - - E ko:K01995 ko02010,ko02024,map02010,map02024 ko00000,ko00001,ko00002,ko02000 Branched-chain amino acid ATP-binding cassette transporter
LDDHDPMB_00130 6.62e-194 livF - - E ko:K01996 ko02010,ko02024,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ATPases associated with a variety of cellular activities
LDDHDPMB_00131 1.73e-287 livK - - E ko:K01999 ko02010,ko02024,map02010,map02024 ko00000,ko00001,ko00002,ko02000 Receptor family ligand binding region
LDDHDPMB_00132 1e-244 - - - K ko:K03484 - ko00000,ko03000 helix_turn _helix lactose operon repressor
LDDHDPMB_00133 0.0 gtfA 2.4.1.7 GH13 G ko:K00690 ko00500,map00500 ko00000,ko00001,ko01000 Domain of unknown function (DUF1964)
LDDHDPMB_00134 0.0 - - - G - - - Transporter major facilitator family protein
LDDHDPMB_00135 1.13e-145 livK - - E ko:K01999 ko02010,ko02024,map02010,map02024 ko00000,ko00001,ko00002,ko02000 Receptor family ligand binding region
LDDHDPMB_00136 6.55e-309 accBC3 6.3.4.14, 6.4.1.2, 6.4.1.3 - I ko:K11263 ko00061,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200,map01212 ko00000,ko00001,ko00002,ko01000 Biotin carboxylase C-terminal domain
LDDHDPMB_00137 3.05e-234 - - - S - - - Domain of unknown function (DUF4392)
LDDHDPMB_00138 0.0 scrT - - G - - - Transporter major facilitator family protein
LDDHDPMB_00139 5.95e-121 - - - S - - - Acetyltransferase (GNAT) family
LDDHDPMB_00140 2.26e-64 - - - S - - - Protein of unknown function (DUF1778)
LDDHDPMB_00142 0.0 - - - EGP - - - Sugar (and other) transporter
LDDHDPMB_00143 1.53e-258 ilvC 1.1.1.86 - H ko:K00053 ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00770,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
LDDHDPMB_00144 0.0 - 3.1.1.53 - E ko:K05970 - ko00000,ko01000 Carbohydrate esterase, sialic acid-specific acetylesterase
LDDHDPMB_00145 3.67e-281 - - - E - - - GDSL-like Lipase/Acylhydrolase family
LDDHDPMB_00146 0.0 bglA 3.2.1.21 - G ko:K05350 ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110 ko00000,ko00001,ko01000 Glycosyl hydrolase family 1
LDDHDPMB_00147 2.28e-175 - 3.2.1.25 - G ko:K01192 ko00511,ko04142,map00511,map04142 ko00000,ko00001,ko01000 beta-mannosidase
LDDHDPMB_00148 5.1e-240 - - - K - - - helix_turn _helix lactose operon repressor
LDDHDPMB_00149 1.8e-144 - - - S - - - Protein of unknown function, DUF624
LDDHDPMB_00150 3.02e-171 - - - - - - - -
LDDHDPMB_00151 5.24e-34 - - - - - - - -
LDDHDPMB_00152 0.0 - - - G - - - N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase)
LDDHDPMB_00153 8.53e-172 - - - V ko:K02068 - ko00000,ko00002,ko02000 ATPases associated with a variety of cellular activities
LDDHDPMB_00154 1.42e-187 - - - V ko:K02069 - ko00000,ko00002,ko02000 Uncharacterised protein family (UPF0014)
LDDHDPMB_00155 0.0 aroP - - E ko:K03293,ko:K11732 - ko00000,ko02000 aromatic amino acid transport protein AroP K03293
LDDHDPMB_00157 5.82e-165 - - - V ko:K02003 - ko00000,ko00002,ko02000 ABC transporter
LDDHDPMB_00158 0.0 - - - V ko:K02004 - ko00000,ko00002,ko02000 FtsX-like permease family
LDDHDPMB_00159 0.0 - - - E ko:K03293 - ko00000 Amino acid permease
LDDHDPMB_00160 1.08e-43 - - - V ko:K02004 - ko00000,ko00002,ko02000 efflux transmembrane transporter activity
LDDHDPMB_00162 0.0 - - - M - - - MacB-like periplasmic core domain
LDDHDPMB_00163 8.06e-96 - - - V ko:K02003 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
LDDHDPMB_00164 7.97e-137 - - - K - - - helix_turn_helix multiple antibiotic resistance protein
LDDHDPMB_00165 0.0 - - - V ko:K06147 - ko00000,ko02000 ABC transporter, ATP-binding protein
LDDHDPMB_00166 0.0 - - - V ko:K06147 - ko00000,ko02000 ABC transporter transmembrane region
LDDHDPMB_00167 0.0 - 3.5.1.104 - G ko:K22278 - ko00000,ko01000 Polysaccharide deacetylase
LDDHDPMB_00168 5.42e-158 - 3.6.1.27 - I ko:K19302 ko00550,map00550 ko00000,ko00001,ko01000,ko01011 Acid phosphatase homologues
LDDHDPMB_00169 6.76e-151 - 2.3.1.18, 2.3.1.79 - S ko:K00633,ko:K00661 - ko00000,ko01000 Maltose acetyltransferase
LDDHDPMB_00170 1.34e-98 - - - - - - - -
LDDHDPMB_00171 1.16e-292 livK - - E ko:K01999 ko02010,ko02024,map02010,map02024 ko00000,ko00001,ko00002,ko02000 Receptor family ligand binding region
LDDHDPMB_00172 2.75e-136 - - - K - - - Psort location Cytoplasmic, score 8.87
LDDHDPMB_00173 0.0 - - - S ko:K01421 - ko00000 YhgE Pip domain protein
LDDHDPMB_00174 0.0 - - - S ko:K01421 - ko00000 YhgE Pip domain protein
LDDHDPMB_00175 2.58e-139 - - - S ko:K16926 - ko00000,ko00002,ko02000 Hypothetical bacterial integral membrane protein (Trep_Strep)
LDDHDPMB_00176 7.69e-171 - - - P ko:K16785 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Cobalt transport protein
LDDHDPMB_00177 0.0 - - - G ko:K16786,ko:K16787 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ATPases associated with a variety of cellular activities
LDDHDPMB_00178 2.93e-230 - - - P ko:K02077,ko:K09815 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment
LDDHDPMB_00179 3.97e-211 - - - S - - - esterase of the alpha-beta hydrolase superfamily
LDDHDPMB_00180 9.61e-43 - - - K - - - transcriptional regulator
LDDHDPMB_00181 6.61e-147 - - - - - - - -
LDDHDPMB_00183 0.0 - - - E ko:K08659 - ko00000,ko01000,ko01002 Peptidase family C69
LDDHDPMB_00184 7.53e-156 icaR - - K - - - Bacterial regulatory proteins, tetR family
LDDHDPMB_00185 1.95e-301 ftsY - - U ko:K03110 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
LDDHDPMB_00186 1.79e-300 amt - - U ko:K03320 - ko00000,ko02000 Ammonium Transporter Family
LDDHDPMB_00187 6.28e-73 glnB - - K ko:K04751 ko02020,map02020 ko00000,ko00001 Nitrogen regulatory protein P-II
LDDHDPMB_00188 0.0 glnD 2.7.7.59 - O ko:K00990 ko02020,map02020 ko00000,ko00001,ko01000 Nucleotidyltransferase domain
LDDHDPMB_00189 3.38e-51 - - - K - - - sequence-specific DNA binding
LDDHDPMB_00190 0.0 dnaB 3.6.4.12 - L ko:K02314 ko03030,ko04112,map03030,map04112 ko00000,ko00001,ko01000,ko03032 Participates in initiation and elongation during chromosome replication
LDDHDPMB_00191 0.0 murE - - M - - - Domain of unknown function (DUF1727)
LDDHDPMB_00192 6.15e-183 cobQ2 - - S ko:K07009 - ko00000 CobB/CobQ-like glutamine amidotransferase domain
LDDHDPMB_00193 3.85e-69 - - - S - - - granule-associated protein
LDDHDPMB_00194 0.0 - - - S ko:K03688 - ko00000 ABC1 family
LDDHDPMB_00195 3.02e-254 glpQ 3.1.4.46 - C ko:K01126 ko00564,map00564 ko00000,ko00001,ko01000 Glycerophosphoryl diester phosphodiesterase family
LDDHDPMB_00196 5.67e-151 upp 2.4.2.9 - F ko:K00761 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko01000 Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
LDDHDPMB_00197 2.45e-168 - - - - - - - -
LDDHDPMB_00198 5.22e-262 mutT 3.6.1.55 - LT ko:K03574 - ko00000,ko01000,ko03400 Phosphoglycerate mutase family
LDDHDPMB_00199 0.0 ppk 2.7.4.1 - P ko:K00937 ko00190,ko03018,map00190,map03018 ko00000,ko00001,ko01000,ko03019 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
LDDHDPMB_00200 6.77e-94 - - - D - - - bacterial-type flagellum organization
LDDHDPMB_00201 2.01e-291 cpaF - - U ko:K02283 - ko00000,ko02035,ko02044 Type II IV secretion system protein
LDDHDPMB_00202 3.09e-151 - - - U ko:K12510 - ko00000,ko02044 Type ii secretion system
LDDHDPMB_00203 3.93e-143 - - - U - - - Type II secretion system (T2SS), protein F
LDDHDPMB_00204 4.93e-52 - - - S - - - Protein of unknown function (DUF4244)
LDDHDPMB_00205 5.66e-74 - - - U - - - TadE-like protein
LDDHDPMB_00206 6.12e-98 - - - S - - - TIGRFAM helicase secretion neighborhood TadE-like protein
LDDHDPMB_00207 0.0 dnaX 2.7.7.7 - L ko:K02343 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase III subunit gamma tau
LDDHDPMB_00208 8.17e-141 recR - - L ko:K06187 ko03440,map03440 ko00000,ko00001,ko03400 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
LDDHDPMB_00209 2.52e-173 ask 2.7.2.4 - E ko:K00928 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Amino acid kinase family
LDDHDPMB_00210 5.79e-126 ask 2.7.2.4 - E ko:K00928 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 ACT domain
LDDHDPMB_00211 2.38e-252 asd 1.2.1.11 - E ko:K00133 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
LDDHDPMB_00212 1.7e-155 - - - - - - - -
LDDHDPMB_00213 0.0 leuA 2.3.3.13 - E ko:K01649 ko00290,ko00620,ko01100,ko01110,ko01210,ko01230,map00290,map00620,map01100,map01110,map01210,map01230 br01601,ko00000,ko00001,ko00002,ko01000 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
LDDHDPMB_00214 0.0 pbp5 - - M - - - Transglycosylase
LDDHDPMB_00215 2.86e-274 ino1 5.5.1.4 - I ko:K01858 ko00521,ko00562,ko01100,ko01130,map00521,map00562,map01100,map01130 ko00000,ko00001,ko01000 Myo-inositol-1-phosphate synthase
LDDHDPMB_00217 4.9e-281 - - - I - - - PAP2 superfamily
LDDHDPMB_00218 0.0 topA 5.99.1.2 - L ko:K03168 - ko00000,ko01000,ko03032,ko03400 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
LDDHDPMB_00219 2.72e-142 tmk 2.7.4.9 - F ko:K00943 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
LDDHDPMB_00220 1.16e-285 holB 2.7.7.7 - L ko:K02341 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase III
LDDHDPMB_00221 6.8e-181 - - - S ko:K06910 - ko00000 Phosphatidylethanolamine-binding protein
LDDHDPMB_00222 0.0 - - - E ko:K08659 - ko00000,ko01000,ko01002 Peptidase family C69
LDDHDPMB_00223 0.0 pepD - - E ko:K08659 - ko00000,ko01000,ko01002 Peptidase family C69
LDDHDPMB_00224 3.43e-281 - - - S ko:K07133 - ko00000 Domain of unknown function (DUF4143)
LDDHDPMB_00225 0.0 fhs 6.3.4.3 - F ko:K01938 ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Formate-tetrahydrofolate ligase
LDDHDPMB_00226 9.48e-83 - - - S - - - Macrophage migration inhibitory factor (MIF)
LDDHDPMB_00227 5.83e-255 - - - S - - - Protein conserved in bacteria
LDDHDPMB_00228 1.74e-130 - - - S - - - GtrA-like protein
LDDHDPMB_00229 2.38e-224 - - - - - - - -
LDDHDPMB_00230 1.51e-159 - - - G - - - Phosphoglycerate mutase family
LDDHDPMB_00231 0.0 - - - EGP - - - Major Facilitator Superfamily
LDDHDPMB_00232 0.0 tnpA - - L - - - Transposase
LDDHDPMB_00233 0.0 gltX 6.1.1.17 - J ko:K01885 ko00860,ko00970,ko01100,ko01110,ko01120,map00860,map00970,map01100,map01110,map01120 ko00000,ko00001,ko00002,ko01000,ko01007,ko02048,ko03016 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
LDDHDPMB_00236 0.0 - - - S - - - Calcineurin-like phosphoesterase
LDDHDPMB_00237 1.96e-186 ltbR - - K - - - Transcriptional regulator, IclR family, C-terminal domain protein
LDDHDPMB_00238 0.0 leuC 4.2.1.33, 4.2.1.35 - E ko:K01703 ko00290,ko00660,ko00966,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map00966,map01100,map01110,map01210,map01230 br01601,ko00000,ko00001,ko00002,ko01000 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
LDDHDPMB_00239 8.41e-165 leuD 4.2.1.33, 4.2.1.35 - E ko:K01704 ko00290,ko00660,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map01100,map01110,map01210,map01230 br01601,ko00000,ko00001,ko00002,ko01000 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
LDDHDPMB_00240 5.98e-55 - - - K - - - Lrp/AsnC ligand binding domain
LDDHDPMB_00241 0.0 nox - - C - - - Pyridine nucleotide-disulphide oxidoreductase
LDDHDPMB_00242 4.71e-316 murA 2.5.1.7 - M ko:K00790 ko00520,ko00550,ko01100,map00520,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
LDDHDPMB_00243 1.57e-202 plsC2 2.3.1.51 - I ko:K00655 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko01004 Phosphate acyltransferases
LDDHDPMB_00244 1.02e-202 gpsA 1.1.1.94 - I ko:K00057 ko00564,ko01110,map00564,map01110 ko00000,ko00001,ko01000 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
LDDHDPMB_00245 2.54e-278 ddl 6.3.2.4 - F ko:K01921 ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502 ko00000,ko00001,ko01000,ko01011 Belongs to the D-alanine--D-alanine ligase family
LDDHDPMB_00247 3.07e-178 - - - S - - - Domain of unknown function (DUF4854)
LDDHDPMB_00248 1.65e-236 - - - S - - - CAAX protease self-immunity
LDDHDPMB_00249 2.29e-186 - - - M - - - Mechanosensitive ion channel
LDDHDPMB_00250 9.92e-149 - - - K - - - Bacterial regulatory proteins, tetR family
LDDHDPMB_00251 5.91e-297 - - - S - - - Psort location Cytoplasmic, score 8.87
LDDHDPMB_00252 1.12e-209 - - - S - - - Putative ABC-transporter type IV
LDDHDPMB_00253 1.27e-291 - 2.6.1.1 - E ko:K11358 ko00220,ko00250,ko00270,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko01000,ko01007 Psort location Cytoplasmic, score 8.87
LDDHDPMB_00254 0.0 - - - S - - - Psort location Cytoplasmic, score 8.87
LDDHDPMB_00255 0.0 - - - S - - - Psort location Cytoplasmic, score 8.87
LDDHDPMB_00256 3.96e-253 - - - G - - - pfkB family carbohydrate kinase
LDDHDPMB_00257 3.36e-42 rpmB - - J ko:K02902 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal L28 family
LDDHDPMB_00258 0.0 recG 3.6.4.12 - L ko:K03655 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 helicase superfamily c-terminal domain
LDDHDPMB_00259 0.0 - - - M - - - Spy0128-like isopeptide containing domain
LDDHDPMB_00260 1.17e-131 rsmD 2.1.1.171 - L ko:K08316 - ko00000,ko01000,ko03009 Conserved hypothetical protein 95
LDDHDPMB_00261 1.47e-203 trmD 2.1.1.228 - J ko:K00554 - ko00000,ko01000,ko03016 Belongs to the RNA methyltransferase TrmD family
LDDHDPMB_00262 7.44e-155 rimM - - J ko:K02860 - ko00000,ko03009 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
LDDHDPMB_00263 4.08e-62 - - - S ko:K06960 - ko00000 Belongs to the UPF0109 family
LDDHDPMB_00264 8.95e-94 rpsP - - J ko:K02959 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011,ko03029 Belongs to the bacterial ribosomal protein bS16 family
LDDHDPMB_00265 0.0 lacZ 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score 8.87
LDDHDPMB_00266 8.36e-283 - - - S - - - Endonuclease/Exonuclease/phosphatase family
LDDHDPMB_00267 1.62e-205 - - - P - - - Cation efflux family
LDDHDPMB_00268 0.0 ffh 3.6.5.4 - U ko:K03106 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko01000,ko02044 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
LDDHDPMB_00269 0.0 cysS 6.1.1.16 - J ko:K01883 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the class-I aminoacyl-tRNA synthetase family
LDDHDPMB_00270 0.0 yjjK - - S ko:K15738 - ko00000,ko02000 ABC transporter
LDDHDPMB_00271 6.62e-176 - 6.3.5.2 - F ko:K01951 ko00230,ko00983,ko01100,map00230,map00983,map01100 ko00000,ko00001,ko00002,ko01000,ko01002 Peptidase C26
LDDHDPMB_00272 1.08e-119 ilvN 2.2.1.6 - E ko:K01653 ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 ACT domain
LDDHDPMB_00273 0.0 ilvB 2.2.1.6 - H ko:K01652 ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Thiamine pyrophosphate enzyme, central domain
LDDHDPMB_00274 3.18e-181 rnc 3.1.26.3 - J ko:K03685 ko03008,ko05205,map03008,map05205 ko00000,ko00001,ko01000,ko03009,ko03019,ko03036 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
LDDHDPMB_00275 4.3e-40 rpmF - - J ko:K02911 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011,ko03029 Belongs to the bacterial ribosomal protein bL32 family
LDDHDPMB_00276 1.08e-144 - - - S ko:K07040 - ko00000 Uncharacterized ACR, COG1399
LDDHDPMB_00277 1.03e-156 - - - - - - - -
LDDHDPMB_00278 2.39e-113 coaD 2.7.7.3 - H ko:K00954 ko00770,ko01100,map00770,map01100 ko00000,ko00001,ko00002,ko01000 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
LDDHDPMB_00279 2.64e-67 - - - S - - - Protein of unknown function (DUF3039)
LDDHDPMB_00280 1.73e-248 - - - C ko:K19265 - ko00000,ko01000 Aldo/keto reductase family
LDDHDPMB_00281 0.0 pncB 6.3.4.21 - F ko:K00763 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko01000 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
LDDHDPMB_00282 8.13e-59 - - - - - - - -
LDDHDPMB_00283 1.69e-174 rph 2.7.7.56 - J ko:K00989 - ko00000,ko01000,ko03016 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
LDDHDPMB_00284 2.59e-170 rdgB 3.6.1.66 - F ko:K02428 ko00230,map00230 ko00000,ko00001,ko01000 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
LDDHDPMB_00285 2.98e-313 - - - V ko:K12554 ko00550,ko01100,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Psort location Cytoplasmic, score 8.87
LDDHDPMB_00286 3.86e-236 - - - S ko:K07088 - ko00000 Auxin Efflux Carrier
LDDHDPMB_00289 4.94e-287 manC 2.7.7.13 - M ko:K00971 ko00051,ko00520,ko01100,ko01110,map00051,map00520,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Mannose-6-phosphate isomerase
LDDHDPMB_00290 0.0 pgi 5.3.1.9 - G ko:K01810 ko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the GPI family
LDDHDPMB_00291 1.67e-79 rplS - - J ko:K02884 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
LDDHDPMB_00292 3.61e-175 lepB 3.4.21.89 - U ko:K03100 ko02024,ko03060,map02024,map03060 ko00000,ko00001,ko01000,ko01002 Belongs to the peptidase S26 family
LDDHDPMB_00293 5.07e-185 rnhB 3.1.26.4 - L ko:K03470 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
LDDHDPMB_00294 1.28e-229 lolD - - V ko:K02003 - ko00000,ko00002,ko02000 ATPases associated with a variety of cellular activities
LDDHDPMB_00295 0.0 - - - V - - - Efflux ABC transporter, permease protein
LDDHDPMB_00296 3.25e-155 - - - S ko:K07088 - ko00000 Transporter, auxin efflux carrier (AEC) family protein
LDDHDPMB_00297 5.31e-295 dapE 3.5.1.18 - E ko:K01439 ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230 ko00000,ko00001,ko00002,ko01000 Peptidase dimerisation domain
LDDHDPMB_00298 0.0 rne 3.1.26.12 - J ko:K08300,ko:K08301 ko03018,map03018 ko00000,ko00001,ko00002,ko01000,ko03009,ko03019 Ribonuclease E/G family
LDDHDPMB_00299 7.1e-62 rplU - - J ko:K02888 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This protein binds to 23S rRNA in the presence of protein L20
LDDHDPMB_00300 1.23e-52 rpmA - - J ko:K02899 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal L27 protein
LDDHDPMB_00301 0.0 obg - - S ko:K03979 - ko00000,ko01000,ko03009 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
LDDHDPMB_00302 1.76e-261 proB 2.7.2.11 - E ko:K00931 ko00330,ko00332,ko01100,ko01130,ko01230,map00330,map00332,map01100,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
LDDHDPMB_00303 2.39e-295 aspC 2.6.1.1, 2.6.1.2, 2.6.1.66 - E ko:K00812,ko:K08969,ko:K10907,ko:K14260 ko00220,ko00250,ko00270,ko00290,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00290,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 DegT/DnrJ/EryC1/StrS aminotransferase family
LDDHDPMB_00305 5.51e-46 secE - - U ko:K03073 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
LDDHDPMB_00306 3.74e-204 nusG - - K ko:K02601 - ko00000,ko03009,ko03021 Participates in transcription elongation, termination and antitermination
LDDHDPMB_00307 3.53e-92 rplK - - J ko:K02867 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
LDDHDPMB_00308 2.3e-159 rplA - - J ko:K02863 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
LDDHDPMB_00309 8.38e-188 - - - QT - - - PucR C-terminal helix-turn-helix domain
LDDHDPMB_00310 2.36e-216 birA 6.3.4.15 - H ko:K03524 ko00780,ko01100,map00780,map01100 ko00000,ko00001,ko01000,ko03000 Biotin/lipoate A/B protein ligase family
LDDHDPMB_00311 4.06e-134 bioY - - S ko:K03523 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 BioY family
LDDHDPMB_00312 0.0 accC 6.3.4.14, 6.4.1.2, 6.4.1.3 - I ko:K11263 ko00061,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200,map01212 ko00000,ko00001,ko00002,ko01000 Carbamoyl-phosphate synthase L chain, ATP binding domain protein
LDDHDPMB_00313 0.0 pccB - - I - - - Carboxyl transferase domain
LDDHDPMB_00314 0.0 fas - - I ko:K11533 ko00061,ko01100,ko01212,ko04931,map00061,map01100,map01212,map04931 ko00000,ko00001,ko00002,ko01000,ko01004 Beta-ketoacyl synthase, C-terminal domain
LDDHDPMB_00315 1.39e-102 acpS 2.7.8.7 - I ko:K00997 ko00770,map00770 ko00000,ko00001,ko01000 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
LDDHDPMB_00317 4.41e-156 - - - - - - - -
LDDHDPMB_00318 2.28e-238 ldh 1.1.1.27 - C ko:K00016 ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922 ko00000,ko00001,ko01000,ko04147 Belongs to the LDH MDH superfamily
LDDHDPMB_00319 2.28e-65 rpsO - - J ko:K02956 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
LDDHDPMB_00320 0.0 pnp 2.7.7.8 - J ko:K00962 ko00230,ko00240,ko03018,map00230,map00240,map03018 ko00000,ko00001,ko00002,ko01000,ko03016,ko03019 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction
LDDHDPMB_00321 2.65e-128 lemA - - S ko:K03744 - ko00000 LemA family
LDDHDPMB_00322 0.0 - - - S - - - Predicted membrane protein (DUF2207)
LDDHDPMB_00323 2.7e-237 nrdF 1.17.4.1 - F ko:K00526 ko00230,ko00240,ko01100,map00230,map00240,map01100 ko00000,ko00001,ko00002,ko01000,ko03400 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
LDDHDPMB_00324 0.0 nrdE 1.17.4.1 - F ko:K00525 ko00230,ko00240,ko01100,map00230,map00240,map01100 ko00000,ko00001,ko00002,ko01000,ko03400 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
LDDHDPMB_00325 2.38e-100 nrdI - - F ko:K03647 - ko00000 Probably involved in ribonucleotide reductase function
LDDHDPMB_00326 7.35e-28 nrdH - - O ko:K06191 - ko00000 Glutaredoxin
LDDHDPMB_00327 5.57e-214 - - - C - - - Oxidoreductase, aldo keto reductase family protein
LDDHDPMB_00328 0.0 - - - O ko:K08303 ko05120,map05120 ko00000,ko00001,ko01000,ko01002 Peptidase family U32 C-terminal domain
LDDHDPMB_00329 1.79e-288 yfiH - - Q ko:K05810 - ko00000,ko01000 Multi-copper polyphenol oxidoreductase laccase
LDDHDPMB_00330 3.41e-193 ispD 1.1.1.405, 2.7.7.40, 2.7.7.60 - I ko:K00991,ko:K21681 ko00040,ko00900,ko01100,ko01110,ko01130,map00040,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP)
LDDHDPMB_00331 2.7e-172 pcp 3.4.19.3 - O ko:K01304 - ko00000,ko01000,ko01002 Removes 5-oxoproline from various penultimate amino acid residues except L-proline
LDDHDPMB_00332 3.73e-192 - - - D - - - nuclear chromosome segregation
LDDHDPMB_00333 0.0 pepC2 3.4.22.40 - E ko:K01372 - ko00000,ko01000,ko01002 Peptidase C1-like family
LDDHDPMB_00334 8.35e-279 aroG 2.5.1.54 - E ko:K01626 ko00400,ko01100,ko01110,ko01130,ko01230,ko02024,map00400,map01100,map01110,map01130,map01230,map02024 ko00000,ko00001,ko00002,ko01000 Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
LDDHDPMB_00335 0.0 - - - I - - - Psort location CytoplasmicMembrane, score 9.99
LDDHDPMB_00336 1.15e-305 aroG 2.5.1.54 - E ko:K01626 ko00400,ko01100,ko01110,ko01130,ko01230,ko02024,map00400,map01100,map01110,map01130,map01230,map02024 ko00000,ko00001,ko00002,ko01000 Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
LDDHDPMB_00337 2.15e-155 mtnN 3.2.2.9 - E ko:K01243 ko00270,ko01100,ko01230,map00270,map01100,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
LDDHDPMB_00338 1.85e-280 phoR 2.7.13.3 - T ko:K07636,ko:K07768 ko02020,map02020 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 His Kinase A (phosphoacceptor) domain
LDDHDPMB_00339 1.32e-168 regX3 - - KT ko:K07776 ko02020,map02020 ko00000,ko00001,ko00002,ko02022 Transcriptional regulatory protein, C terminal
LDDHDPMB_00340 3.8e-262 pstS - - P ko:K02040 ko02010,ko02020,ko05152,map02010,map02020,map05152 ko00000,ko00001,ko00002,ko02000 Part of the ABC transporter complex PstSACB involved in phosphate import
LDDHDPMB_00341 2.63e-218 pstC - - P ko:K02037 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 probably responsible for the translocation of the substrate across the membrane
LDDHDPMB_00342 1.53e-221 pstA - - P ko:K02038 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Phosphate transport system permease
LDDHDPMB_00343 1.51e-188 pstB 3.6.3.27 - P ko:K02036 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
LDDHDPMB_00344 0.0 - - - S ko:K06901 - ko00000,ko02000 Permease family
LDDHDPMB_00345 2.41e-210 - - - P ko:K02077 - ko00000,ko00002,ko02000 Zinc-uptake complex component A periplasmic
LDDHDPMB_00346 2.13e-114 rplJ - - J ko:K02864 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
LDDHDPMB_00347 9.38e-68 rplL - - J ko:K02935 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
LDDHDPMB_00348 0.0 - - - T - - - Forkhead associated domain
LDDHDPMB_00349 0.0 - - - L - - - Superfamily I DNA and RNA helicases and helicase subunits
LDDHDPMB_00350 2.19e-52 - - - - - - - -
LDDHDPMB_00351 8.73e-132 - - - NO - - - SAF
LDDHDPMB_00352 1.76e-43 - - - S - - - Putative regulatory protein
LDDHDPMB_00353 1.84e-177 ygfA 6.3.3.2 - H ko:K01934 ko00670,ko01100,map00670,map01100 ko00000,ko00001,ko01000 5-formyltetrahydrofolate cyclo-ligase family
LDDHDPMB_00354 1.59e-103 rimJ 2.3.1.128 - J ko:K03790 - ko00000,ko01000,ko03009 Acetyltransferase (GNAT) domain
LDDHDPMB_00355 1.73e-257 - - - - - - - -
LDDHDPMB_00356 4.55e-64 groS - - O ko:K04078 - ko00000,ko03029,ko03110 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
LDDHDPMB_00360 2.06e-35 rpmG - - J ko:K02913 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal protein L33
LDDHDPMB_00361 3.78e-295 murB 1.3.1.98 - M ko:K00075 ko00520,ko00550,ko01100,map00520,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Cell wall formation
LDDHDPMB_00362 0.0 - - - E ko:K03294 - ko00000 aromatic amino acid transport protein AroP K03293
LDDHDPMB_00363 4.15e-80 fdxA - - C ko:K05524 - ko00000 4Fe-4S binding domain
LDDHDPMB_00364 7.49e-282 dapC - - E - - - Aminotransferase class I and II
LDDHDPMB_00365 0.0 dinB 2.7.7.7 - L ko:K02346 - ko00000,ko01000,ko03400 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
LDDHDPMB_00367 1e-243 pdxB - - EH - - - Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
LDDHDPMB_00368 3.01e-147 yigZ - - S - - - Uncharacterized protein family UPF0029
LDDHDPMB_00369 1.73e-157 - - - - - - - -
LDDHDPMB_00370 0.0 malQ 2.4.1.25 GH77 G ko:K00705 ko00500,ko01100,map00500,map01100 ko00000,ko00001,ko01000 4-alpha-glucanotransferase
LDDHDPMB_00371 1.31e-103 rplM - - J ko:K02871 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
LDDHDPMB_00372 6.69e-97 rpsI - - J ko:K02996 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the universal ribosomal protein uS9 family
LDDHDPMB_00373 0.0 glgX 3.2.1.196, 3.2.1.68 CBM48,GH13 G ko:K01214,ko:K02438 ko00500,ko01100,ko01110,map00500,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Belongs to the glycosyl hydrolase 13 family
LDDHDPMB_00374 1.65e-267 - - - GK - - - transcriptional repressor of nag (N-acetylglucosamine) operon K02565
LDDHDPMB_00375 0.0 adhE 1.1.1.1, 1.2.1.10, 1.2.1.81 - C ko:K04072,ko:K15515 ko00010,ko00071,ko00350,ko00620,ko00625,ko00626,ko00650,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00620,map00625,map00626,map00650,map01100,map01110,map01120,map01130,map01220 ko00000,ko00001,ko01000 belongs to the iron- containing alcohol dehydrogenase family
LDDHDPMB_00376 3.9e-244 - - - K - - - Psort location Cytoplasmic, score
LDDHDPMB_00377 3.06e-198 - - - S - - - YwiC-like protein
LDDHDPMB_00378 6.58e-68 rpsJ - - J ko:K02946 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Involved in the binding of tRNA to the ribosomes
LDDHDPMB_00379 1.06e-153 rplC - - J ko:K02906 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
LDDHDPMB_00380 3.41e-151 rplD - - J ko:K02926 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms part of the polypeptide exit tunnel
LDDHDPMB_00381 1.79e-61 rplW - - J ko:K02892 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
LDDHDPMB_00382 2.32e-196 rplB - - J ko:K02886 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
LDDHDPMB_00383 6.95e-63 rpsS - - J ko:K02965 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
LDDHDPMB_00384 2.68e-75 rplV - - J ko:K02890 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
LDDHDPMB_00385 2.32e-176 rpsC - - J ko:K02982 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
LDDHDPMB_00386 1.15e-99 rplP - - J ko:K02878 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
LDDHDPMB_00387 5.27e-49 rpmC - - J ko:K02904 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the universal ribosomal protein uL29 family
LDDHDPMB_00388 7.84e-55 rpsQ - - J ko:K02961 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
LDDHDPMB_00389 5.15e-79 rplN - - J ko:K02874 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
LDDHDPMB_00390 4.44e-68 rplX - - J ko:K02895 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
LDDHDPMB_00391 1.94e-136 rplE - - J ko:K02931 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
LDDHDPMB_00392 4.97e-40 rpsN - - J ko:K02954 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
LDDHDPMB_00393 9.65e-91 rpsH - - J ko:K02994 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
LDDHDPMB_00394 6.61e-123 rplF - - J ko:K02933 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
LDDHDPMB_00395 5.96e-77 rplR - - J ko:K02881 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
LDDHDPMB_00396 6.25e-132 rpsE - - J ko:K02988 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
LDDHDPMB_00397 1.75e-33 rpmD - - J ko:K02907 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal protein L30p/L7e
LDDHDPMB_00398 3.98e-100 rplO - - J ko:K02876 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 binds to the 23S rRNA
LDDHDPMB_00399 0.0 secY - - U ko:K03076 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
LDDHDPMB_00400 4.41e-131 adk 2.7.4.3 - F ko:K00939 ko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000,ko04147 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
LDDHDPMB_00401 4.86e-45 infA - - J ko:K02518 - ko00000,ko03012 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
LDDHDPMB_00402 1.03e-20 rpmJ - - J ko:K02919 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL36 family
LDDHDPMB_00403 1.17e-81 rpsM - - J ko:K02952 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
LDDHDPMB_00404 1.73e-84 rpsK - - J ko:K02948 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
LDDHDPMB_00405 1.4e-236 rpoA 2.7.7.6 - K ko:K03040 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
LDDHDPMB_00406 1.16e-92 rplQ - - J ko:K02879 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal protein L17
LDDHDPMB_00407 6.34e-190 truA 5.4.99.12 - J ko:K06173 - ko00000,ko01000,ko03016 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
LDDHDPMB_00409 5.94e-208 - - - - - - - -
LDDHDPMB_00410 6.28e-249 nusA - - K ko:K02600 - ko00000,ko03009,ko03021 Participates in both transcription termination and antitermination
LDDHDPMB_00411 0.0 infB - - J ko:K02519 - ko00000,ko03012,ko03029 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
LDDHDPMB_00412 5.79e-122 rbfA - - J ko:K02834 - ko00000,ko03009 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
LDDHDPMB_00413 5.82e-250 truB 5.4.99.25 - J ko:K03177 - ko00000,ko01000,ko03016 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
LDDHDPMB_00414 9.91e-302 ribF 2.7.1.26, 2.7.7.2 - H ko:K11753 ko00740,ko01100,ko01110,map00740,map01100,map01110 ko00000,ko00001,ko00002,ko01000 riboflavin kinase
LDDHDPMB_00415 0.0 radA - - O ko:K04485 - ko00000,ko03400 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
LDDHDPMB_00416 1.12e-128 - - - - - - - -
LDDHDPMB_00417 5.05e-07 - - - S - - - Mitochondrial domain of unknown function (DUF1713)
LDDHDPMB_00418 2.05e-164 rpiA 5.3.1.6 - G ko:K01807 ko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
LDDHDPMB_00419 7.54e-240 rnhA 3.1.26.4 - L ko:K03469 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
LDDHDPMB_00421 2.27e-307 serS 6.1.1.11 - J ko:K01875 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
LDDHDPMB_00422 1.69e-278 - - - I - - - Diacylglycerol kinase catalytic domain
LDDHDPMB_00423 0.0 pgm 5.4.2.2 - G ko:K01835 ko00010,ko00030,ko00052,ko00230,ko00500,ko00520,ko00521,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00052,map00230,map00500,map00520,map00521,map01100,map01110,map01120,map01130 ko00000,ko00001,ko00002,ko01000 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
LDDHDPMB_00424 0.0 - - - S ko:K06889 - ko00000 alpha beta
LDDHDPMB_00425 5.96e-146 - - - S - - - Protein of unknown function (DUF4125)
LDDHDPMB_00426 0.0 - - - S - - - Domain of unknown function (DUF4037)
LDDHDPMB_00427 8.64e-163 tcsR3 - - K - - - helix_turn_helix, Lux Regulon
LDDHDPMB_00428 0.0 tcsS3 - - KT - - - PspC domain
LDDHDPMB_00429 0.0 pspC - - KT - - - PspC domain
LDDHDPMB_00430 5.45e-146 - - - - - - - -
LDDHDPMB_00431 2.09e-286 metC1 4.4.1.8 - E ko:K01760 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Cys/Met metabolism PLP-dependent enzyme
LDDHDPMB_00432 2.38e-168 - 2.5.1.49 - E ko:K01740 ko00270,ko01100,map00270,map01100 ko00000,ko00001,ko01000 Cys/Met metabolism PLP-dependent enzyme
LDDHDPMB_00433 1.71e-38 - - - E - - - Cys/Met metabolism PLP-dependent enzyme
LDDHDPMB_00435 0.0 lysS 6.1.1.6 - J ko:K04567 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the class-II aminoacyl-tRNA synthetase family
LDDHDPMB_00436 1.71e-186 - - - - - - - -
LDDHDPMB_00437 0.0 - - - E - - - Phospholipase B
LDDHDPMB_00438 0.0 pepC 3.4.22.40 - E ko:K01372 - ko00000,ko01000,ko01002 Peptidase C1-like family
LDDHDPMB_00439 0.0 - - - E ko:K20265 ko02024,map02024 ko00000,ko00001,ko02000 Amino acid permease
LDDHDPMB_00440 0.0 - - - E - - - Serine carboxypeptidase
LDDHDPMB_00441 0.0 - - - E - - - Amino acid permease
LDDHDPMB_00442 1.05e-101 menA 2.5.1.74 - H ko:K02548 ko00130,ko01100,ko01110,map00130,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko01006 Belongs to the MenA family. Type 1 subfamily
LDDHDPMB_00443 2.91e-179 gpmA 5.4.2.11 - G ko:K01834 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
LDDHDPMB_00444 0.0 - 4.2.1.53 - S ko:K10254 - ko00000,ko01000 MCRA family
LDDHDPMB_00445 1.62e-84 - 1.6.5.5 - C ko:K00344 - ko00000,ko01000 Zinc-binding dehydrogenase
LDDHDPMB_00446 4.64e-159 - 1.6.5.5 - C ko:K00344 - ko00000,ko01000 Zinc-binding dehydrogenase
LDDHDPMB_00447 0.0 manA 5.3.1.8 - G ko:K01809 ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Phosphomannose isomerase type I
LDDHDPMB_00448 2.41e-29 - - - - - - - -
LDDHDPMB_00449 1.87e-288 senX3 2.7.13.3 - T ko:K07768 ko02020,map02020 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 ATPase histidine kinase DNA gyrase B HSP90 domain protein
LDDHDPMB_00450 4.13e-156 phoU - - P ko:K02039 - ko00000 Plays a role in the regulation of phosphate uptake
LDDHDPMB_00451 2.42e-268 serC 2.6.1.52 - E ko:K00831 ko00260,ko00680,ko00750,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map00750,map01100,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
LDDHDPMB_00452 1.91e-228 - - - S - - - CHAP domain
LDDHDPMB_00453 1.42e-140 - - - M ko:K21471 - ko00000,ko01000,ko01002,ko01011 NlpC/P60 family
LDDHDPMB_00454 8.87e-252 - - - T - - - Universal stress protein family
LDDHDPMB_00455 1.07e-94 - - - O - - - OsmC-like protein
LDDHDPMB_00456 1.12e-223 thyA 2.1.1.45 - F ko:K00560 ko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523 ko00000,ko00001,ko00002,ko01000 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
LDDHDPMB_00457 1.46e-170 folA 1.5.1.3 - H ko:K00287 ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523 ko00000,ko00001,ko00002,ko01000 dihydrofolate reductase
LDDHDPMB_00458 1.04e-129 ptpA 3.1.3.48 - T ko:K01104 - ko00000,ko01000 low molecular weight
LDDHDPMB_00459 9.11e-256 galE 5.1.3.2 - M ko:K01784 ko00052,ko00520,ko01100,map00052,map00520,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the NAD(P)-dependent epimerase dehydratase family
LDDHDPMB_00460 5.36e-206 trmB 2.1.1.33 - J ko:K03439 - ko00000,ko01000,ko03016 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
LDDHDPMB_00462 3.21e-245 - - - S - - - DUF218 domain
LDDHDPMB_00463 1.78e-239 - 3.1.3.5 - S ko:K01081 ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110 ko00000,ko00001,ko01000 5'-nucleotidase
LDDHDPMB_00464 1.95e-139 - - - - - - - -
LDDHDPMB_00465 0.0 - - - L ko:K07459 - ko00000 AAA ATPase domain
LDDHDPMB_00467 0.0 - - - S - - - Uncharacterized protein conserved in bacteria (DUF2130)
LDDHDPMB_00468 0.0 - - - S - - - Psort location Cytoplasmic, score 8.87
LDDHDPMB_00469 1.89e-187 - - - S - - - Domain of unknown function (DUF4194)
LDDHDPMB_00470 0.0 - - - S - - - Psort location Cytoplasmic, score 8.87
LDDHDPMB_00471 7.2e-302 - - - S - - - Psort location Cytoplasmic, score 8.87
LDDHDPMB_00473 2.83e-84 - - - K - - - Protein of unknown function, DUF488
LDDHDPMB_00474 0.0 gph - - G ko:K16209 - ko00000,ko02000 Psort location CytoplasmicMembrane, score 10.00
LDDHDPMB_00475 0.0 lacZ6 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score 8.87
LDDHDPMB_00476 3.44e-237 - - - K ko:K02529 - ko00000,ko03000 Transcriptional regulator, LacI family
LDDHDPMB_00477 7.35e-152 - 3.8.1.2 - S ko:K01560 ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120 ko00000,ko00001,ko01000 Haloacid dehalogenase-like hydrolase
LDDHDPMB_00478 2.76e-80 - - - - - - - -
LDDHDPMB_00479 8.48e-132 - - - S - - - Domain of unknown function (DUF4190)
LDDHDPMB_00480 5.97e-106 - - - S - - - Domain of unknown function (DUF4190)
LDDHDPMB_00481 2.28e-260 - - - G ko:K02027 - ko00000,ko00002,ko02000 Bacterial extracellular solute-binding protein
LDDHDPMB_00482 0.0 bga1 3.2.1.23 - G ko:K12308 ko00052,map00052 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score 8.87
LDDHDPMB_00483 7.36e-225 - - - G ko:K02026 - ko00000,ko00002,ko02000 ABC transporter permease
LDDHDPMB_00484 4.97e-225 - - - G ko:K02025 - ko00000,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
LDDHDPMB_00485 2.41e-239 - - - K - - - Periplasmic binding protein domain
LDDHDPMB_00489 5.74e-241 - - - M - - - Glycosyltransferase like family 2
LDDHDPMB_00490 0.0 - - - S - - - AI-2E family transporter
LDDHDPMB_00491 2.55e-307 - - - M - - - Glycosyl transferase family 21
LDDHDPMB_00492 1.78e-207 natA - - V ko:K01990 - ko00000,ko00002,ko02000 ATPases associated with a variety of cellular activities
LDDHDPMB_00493 0.0 - - - - ko:K01992 - ko00000,ko00002,ko02000 -
LDDHDPMB_00494 1.65e-289 dacB 3.4.16.4 - M ko:K07259 ko00550,map00550 ko00000,ko00001,ko01000,ko01002,ko01011 D-Ala-D-Ala carboxypeptidase 3 (S13) family
LDDHDPMB_00495 5e-274 tilS 2.4.2.8, 6.3.4.19 - J ko:K00760,ko:K04075 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 ko00000,ko00001,ko01000,ko03016 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
LDDHDPMB_00496 2.77e-128 hpt 2.4.2.8 - F ko:K00760 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 ko00000,ko00001,ko01000 Belongs to the purine pyrimidine phosphoribosyltransferase family
LDDHDPMB_00497 0.0 ftsH - - O ko:K03798 - ko00000,ko00002,ko01000,ko01002,ko03110 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
LDDHDPMB_00498 3.66e-186 folK 2.7.6.3, 4.1.2.25 - H ko:K13940 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
LDDHDPMB_00499 7.39e-148 - - - S - - - Protein of unknown function (DUF3180)
LDDHDPMB_00500 4.03e-221 tesB - - I ko:K10805 ko01040,map01040 ko00000,ko00001,ko01000,ko01004 Thioesterase-like superfamily
LDDHDPMB_00501 0.0 yjjK - - S - - - ATP-binding cassette protein, ChvD family
LDDHDPMB_00502 4.14e-91 fms 3.5.1.88 - J ko:K01462 - ko00000,ko01000 Removes the formyl group from the N-terminal Met of newly synthesized proteins
LDDHDPMB_00503 0.0 - 2.5.1.49 - H ko:K01740 ko00270,ko01100,map00270,map01100 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score 9.98
LDDHDPMB_00504 6.02e-145 - - - S ko:K16925 - ko00000,ko00002,ko02000 ABC-type cobalt transport system, permease component
LDDHDPMB_00505 5.11e-184 - - - - - - - -
LDDHDPMB_00507 4.11e-223 - - - - - - - -
LDDHDPMB_00508 1.47e-47 rpmE - - J ko:K02909 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds the 23S rRNA
LDDHDPMB_00509 0.0 xylA 5.3.1.5 - G ko:K01805 ko00040,ko00051,ko01100,map00040,map00051,map01100 ko00000,ko00001,ko01000 Belongs to the xylose isomerase family
LDDHDPMB_00510 0.0 - 3.2.1.37, 3.2.1.55 GH43,GH51 G ko:K01198,ko:K01209 ko00520,ko01100,map00520,map01100 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 43 family
LDDHDPMB_00511 2.63e-241 - - - K ko:K02529,ko:K17640 - ko00000,ko03000 Bacterial regulatory proteins, lacI family
LDDHDPMB_00512 1.02e-310 - - - G ko:K02027,ko:K10117 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter periplasmic binding protein YcjN precursor K02027
LDDHDPMB_00513 1.54e-246 - - - U ko:K02025,ko:K10118 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
LDDHDPMB_00514 1.07e-203 - - - P ko:K02026,ko:K10119,ko:K17243 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
LDDHDPMB_00515 0.0 - 3.2.1.37 GH43 G ko:K01198 ko00520,ko01100,map00520,map01100 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 43 family
LDDHDPMB_00516 0.0 - 3.1.1.53 - G ko:K05970 - ko00000,ko01000 Glycosyl hydrolase family 2, sugar binding domain protein
LDDHDPMB_00517 3.21e-299 - - CE10 I ko:K03929 - ko00000,ko01000 Belongs to the type-B carboxylesterase lipase family
LDDHDPMB_00518 0.0 - - - G - - - candidate polyfunctional acetylxylan esterase b-xylosidase A-L-arabinofuranosidase, CBM9 module, glycoside hydrolase family 43 protein and carbohydrate esterase family 6 protein K01238
LDDHDPMB_00519 0.0 xylB 2.7.1.17 - G ko:K00854 ko00040,ko01100,map00040,map01100 ko00000,ko00001,ko00002,ko01000 FGGY family of carbohydrate kinases, C-terminal domain
LDDHDPMB_00520 8.6e-293 xylR - - GK - - - ROK family
LDDHDPMB_00521 9.15e-49 rpmE - - J ko:K02909 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds the 23S rRNA
LDDHDPMB_00522 9.55e-217 prfA - - J ko:K02835 - ko00000,ko03012 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
LDDHDPMB_00523 9.47e-225 prmC 2.1.1.297 - J ko:K02493 - ko00000,ko01000,ko03012 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
LDDHDPMB_00524 2.61e-150 ywlC 2.7.7.87 - J ko:K07566 - ko00000,ko01000,ko03009,ko03016 Belongs to the SUA5 family
LDDHDPMB_00525 1.04e-268 rfe 2.7.8.33, 2.7.8.35 - M ko:K02851 - ko00000,ko01000,ko01003,ko01005 Glycosyl transferase family 4
LDDHDPMB_00526 0.0 guaB 1.1.1.205 - F ko:K00088 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko04147 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth
LDDHDPMB_00527 1.09e-158 orn - - L ko:K13288 ko03008,map03008 ko00000,ko00001,ko01000,ko03009,ko03019 3'-to-5' exoribonuclease specific for small oligoribonucleotides
LDDHDPMB_00528 1.72e-200 - - - S - - - Sucrose-6F-phosphate phosphohydrolase
LDDHDPMB_00529 0.0 - - - L - - - PIF1-like helicase
LDDHDPMB_00530 7.39e-98 - - - - - - - -
LDDHDPMB_00531 0.0 proS 6.1.1.15 - J ko:K01881 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
LDDHDPMB_00532 6.13e-174 - - - L ko:K03111 ko03030,ko03430,ko03440,map03030,map03430,map03440 ko00000,ko00001,ko03029,ko03032,ko03400 Single-strand binding protein family
LDDHDPMB_00533 0.0 pepO 3.4.24.11, 3.4.24.71 - O ko:K01389,ko:K01415,ko:K07386 ko04614,ko04640,ko04974,ko05010,map04614,map04640,map04974,map05010 ko00000,ko00001,ko01000,ko01002,ko04090,ko04147 Peptidase family M13
LDDHDPMB_00534 1.78e-133 - - - S - - - Short repeat of unknown function (DUF308)
LDDHDPMB_00535 1.86e-165 map 3.4.11.18 - E ko:K01265 - ko00000,ko01000,ko01002 Methionine aminopeptidase
LDDHDPMB_00536 0.0 gltA 2.3.3.1 - C ko:K01647 ko00020,ko00630,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map01100,map01110,map01120,map01130,map01200,map01210,map01230 br01601,ko00000,ko00001,ko00002,ko01000 Citrate synthase, C-terminal domain
LDDHDPMB_00537 6.33e-109 rlmH 2.1.1.177 - J ko:K00783 - ko00000,ko01000,ko03009 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
LDDHDPMB_00538 1.57e-236 dapD 2.3.1.117 - E ko:K00674 ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2- amino-6-oxopimelate using succinyl-CoA
LDDHDPMB_00539 1.65e-265 prfB - - J ko:K02836 - ko00000,ko03012 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
LDDHDPMB_00540 1.64e-298 ftsE - - D ko:K09812 ko02010,map02010 ko00000,ko00001,ko00002,ko02000,ko03036 Cell division ATP-binding protein FtsE
LDDHDPMB_00541 2.42e-209 ftsX - - D ko:K09811 ko02010,map02010 ko00000,ko00001,ko00002,ko02000,ko03036 Part of the ABC transporter FtsEX involved in cellular division
LDDHDPMB_00542 3.74e-282 - - - D ko:K21471 - ko00000,ko01000,ko01002,ko01011 CHAP domain protein
LDDHDPMB_00543 1.36e-105 smpB - - J ko:K03664 - ko00000 the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
LDDHDPMB_00544 3.92e-213 glnH - - ET ko:K02030 - ko00000,ko00002,ko02000 ABC transporter, substrate-binding protein, family 3
LDDHDPMB_00545 3.75e-215 glnH - - ET ko:K02030 - ko00000,ko00002,ko02000 ABC transporter, substrate-binding protein, family 3
LDDHDPMB_00546 6.2e-208 yecS - - E ko:K02029 - ko00000,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
LDDHDPMB_00547 2.6e-197 tcyC 3.6.3.21 - E ko:K02028,ko:K02029 - ko00000,ko00002,ko01000,ko02000 ATPases associated with a variety of cellular activities
LDDHDPMB_00548 2.66e-231 - - - K - - - Psort location Cytoplasmic, score
LDDHDPMB_00549 1.98e-164 - - - K - - - helix_turn_helix, Lux Regulon
LDDHDPMB_00550 0.0 glmS 2.6.1.16 - M ko:K00820 ko00250,ko00520,ko01100,ko01130,ko04931,map00250,map00520,map01100,map01130,map04931 ko00000,ko00001,ko01000,ko01002 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
LDDHDPMB_00551 2.61e-184 - 5.4.99.28, 5.4.99.29 - J ko:K06177 - ko00000,ko01000,ko03009,ko03016 RNA pseudouridylate synthase
LDDHDPMB_00552 6.41e-89 - - - - - - - -
LDDHDPMB_00553 1.14e-175 coaX 2.7.1.33 - H ko:K03525 ko00770,ko01100,map00770,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
LDDHDPMB_00554 0.0 - - - E ko:K02035 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter, substrate-binding protein, family 5
LDDHDPMB_00555 7.86e-217 - - - P ko:K02033 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
LDDHDPMB_00556 8.71e-201 - - - EP ko:K02034 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
LDDHDPMB_00557 4.99e-181 oppDF2 - - P ko:K02031,ko:K02032,ko:K02034 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 ATPases associated with a variety of cellular activities
LDDHDPMB_00558 9.13e-180 - - - E ko:K02032 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 ATPases associated with a variety of cellular activities
LDDHDPMB_00559 3.07e-284 metB 2.5.1.48 - E ko:K01739 ko00270,ko00450,ko00920,ko01100,ko01110,ko01130,ko01230,map00270,map00450,map00920,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Cys/Met metabolism PLP-dependent enzyme
LDDHDPMB_00560 5.12e-243 cbs 2.5.1.47, 4.2.1.22 - E ko:K01697,ko:K01738 ko00260,ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00260,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Pyridoxal-phosphate dependent enzyme
LDDHDPMB_00561 0.0 recQ 3.6.4.12 - L ko:K03654 ko03018,map03018 ko00000,ko00001,ko01000,ko03400 ATP-dependent DNA helicase RecQ
LDDHDPMB_00562 1.01e-221 - - - S - - - Protein conserved in bacteria
LDDHDPMB_00563 1.29e-135 - - - J - - - Acetyltransferase (GNAT) domain
LDDHDPMB_00566 4.02e-52 - - - S - - - Protein of unknown function (DUF1706)
LDDHDPMB_00567 1.14e-30 M1-431 - - S - - - Protein of unknown function (DUF1706)
LDDHDPMB_00569 3.78e-76 - - - - - - - -
LDDHDPMB_00570 4.86e-84 - - - - - - - -
LDDHDPMB_00571 7.91e-95 mutT 3.6.1.55 - L ko:K03574 - ko00000,ko01000,ko03400 NUDIX domain
LDDHDPMB_00572 0.0 - - - KL - - - Domain of unknown function (DUF3427)
LDDHDPMB_00573 8.48e-81 - - - S - - - Fic/DOC family
LDDHDPMB_00574 0.0 - - - S - - - Protein of unknown function (DUF1524)
LDDHDPMB_00575 3.33e-123 - - - S - - - Protein of unknown function (DUF4065)
LDDHDPMB_00576 9.13e-119 - - - S ko:K07341 - ko00000,ko02048 Fic/DOC family
LDDHDPMB_00577 2.04e-114 - - - K - - - Acetyltransferase (GNAT) domain
LDDHDPMB_00578 5.05e-190 - - - S - - - 3-oxo-5-alpha-steroid 4-dehydrogenase
LDDHDPMB_00579 3.3e-290 gldA 1.1.1.6 - C ko:K00005,ko:K08317 ko00561,ko00640,ko01100,map00561,map00640,map01100 ko00000,ko00001,ko01000 Iron-containing alcohol dehydrogenase
LDDHDPMB_00580 8.52e-122 luxS 4.4.1.21 - H ko:K07173 ko00270,ko01100,ko01230,ko02024,ko02026,ko05111,map00270,map01100,map01230,map02024,map02026,map05111 ko00000,ko00001,ko00002,ko01000 Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
LDDHDPMB_00581 1.21e-129 cysE - - J - - - COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LDDHDPMB_00582 0.0 alr 5.1.1.1 - M ko:K01775 ko00473,ko01100,ko01502,map00473,map01100,map01502 ko00000,ko00001,ko01000,ko01011 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
LDDHDPMB_00583 0.0 dnaG - - L ko:K02316 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
LDDHDPMB_00584 6.68e-282 - - - P - - - Citrate transporter
LDDHDPMB_00586 0.0 dxs 2.2.1.7 - H ko:K01662 ko00730,ko00900,ko01100,ko01110,ko01130,map00730,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
LDDHDPMB_00587 6.53e-111 purE 5.4.99.18 - F ko:K01588 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
LDDHDPMB_00588 1.2e-286 purK 6.3.4.18 - F ko:K01589 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
LDDHDPMB_00589 2.4e-93 fur - - P ko:K03711 - ko00000,ko03000 Belongs to the Fur family
LDDHDPMB_00590 0.0 lysX - - S - - - Uncharacterised conserved protein (DUF2156)
LDDHDPMB_00591 0.0 - - - S - - - Putative esterase
LDDHDPMB_00592 2.74e-305 purD 6.3.3.1, 6.3.4.13 - F ko:K01945,ko:K11788 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Belongs to the GARS family
LDDHDPMB_00593 3.44e-251 purM 6.3.3.1 - F ko:K01933 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Phosphoribosylformylglycinamidine cyclo-ligase
LDDHDPMB_00594 0.0 purF 2.4.2.14 - F ko:K00764 ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000,ko01002 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
LDDHDPMB_00595 0.0 - - - L ko:K03502 - ko00000,ko03400 DNA-damage repair protein (DNA polymerase IV) K00961
LDDHDPMB_00596 7.52e-95 - - - - - - - -
LDDHDPMB_00597 9.81e-297 - - - S - - - 50S ribosome-binding GTPase
LDDHDPMB_00598 1.21e-130 - - - - - - - -
LDDHDPMB_00599 1.97e-116 - - - S ko:K07005 - ko00000 Pyridoxamine 5'-phosphate oxidase
LDDHDPMB_00600 1.97e-140 - - - K - - - sequence-specific DNA binding
LDDHDPMB_00602 0.0 - - - - - - - -
LDDHDPMB_00603 2.73e-162 - - - - - - - -
LDDHDPMB_00604 2.77e-90 - - - - - - - -
LDDHDPMB_00605 4.96e-139 - - - - - - - -
LDDHDPMB_00606 4.93e-286 - - - S - - - Short C-terminal domain
LDDHDPMB_00607 0.0 purL 6.3.5.3 - F ko:K01952 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 CobB/CobQ-like glutamine amidotransferase domain
LDDHDPMB_00608 4.83e-176 purC 6.3.2.6 - F ko:K01923 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Belongs to the SAICAR synthetase family
LDDHDPMB_00609 8.01e-297 purT 2.1.2.2 - F ko:K08289 ko00230,ko00670,ko01100,ko01110,ko01130,map00230,map00670,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
LDDHDPMB_00610 3.4e-300 - - - M - - - Glycosyl transferase 4-like domain
LDDHDPMB_00611 2.78e-253 ltaE 4.1.2.48 - E ko:K01620 ko00260,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko01000 Beta-eliminating lyase
LDDHDPMB_00613 8.2e-81 rpsL - - J ko:K02950 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
LDDHDPMB_00614 1.34e-104 rpsG - - J ko:K02992 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
LDDHDPMB_00615 0.0 fusA - - J ko:K02355 - ko00000,ko03012,ko03029 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
LDDHDPMB_00616 2.25e-294 tuf - - J ko:K02358 - ko00000,ko03012,ko03029,ko04147 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
LDDHDPMB_00617 1.07e-157 - - - C - - - COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
LDDHDPMB_00618 8.01e-123 - - - - - - - -
LDDHDPMB_00619 7.02e-134 efp - - J ko:K02356 - ko00000,ko03012 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
LDDHDPMB_00620 1.34e-103 nusB - - K ko:K03625 - ko00000,ko03009,ko03021 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
LDDHDPMB_00621 6.95e-306 carA 6.3.5.5 - F ko:K01956 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the CarA family
LDDHDPMB_00622 0.0 carB 6.3.5.5 - EF ko:K01955 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Carbamoyl-phosphate synthetase large chain, oligomerisation domain
LDDHDPMB_00623 5.67e-232 pyrF 4.1.1.23 - F ko:K01591 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Essential for recycling GMP and indirectly, cGMP
LDDHDPMB_00624 6.35e-148 gmk 2.7.4.8 - F ko:K00942 ko00230,ko01100,map00230,map01100 ko00000,ko00001,ko00002,ko01000 Essential for recycling GMP and indirectly, cGMP
LDDHDPMB_00625 0.0 ilvD 4.2.1.9 - H ko:K01687 ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00770,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the IlvD Edd family
LDDHDPMB_00626 4.74e-60 rpoZ 2.7.7.6 - K ko:K03060 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
LDDHDPMB_00627 8.72e-279 metK 2.5.1.6 - H ko:K00789 ko00270,ko01100,ko01110,ko01230,map00270,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
LDDHDPMB_00628 0.0 cfa 2.1.1.79 - M ko:K00574 - ko00000,ko01000 Mycolic acid cyclopropane synthetase
LDDHDPMB_00629 0.0 priA - - L ko:K04066 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
LDDHDPMB_00630 1.06e-235 fmt 2.1.2.9 - J ko:K00604 ko00670,ko00970,map00670,map00970 ko00000,ko00001,ko01000 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
LDDHDPMB_00631 8.15e-110 serB 3.1.3.3 - E ko:K01079 ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko01009 haloacid dehalogenase-like hydrolase
LDDHDPMB_00632 5.9e-163 - - - S - - - SNARE associated Golgi protein
LDDHDPMB_00633 0.0 arc - - O ko:K13527 ko03050,map03050 ko00000,ko00001,ko00002,ko03051 AAA ATPase forming ring-shaped complexes
LDDHDPMB_00634 0.0 dop 3.5.1.119 - S ko:K20814 - ko00000,ko01000,ko03051 Pup-ligase protein
LDDHDPMB_00635 4.64e-220 - 3.1.3.25 - G ko:K01092 ko00521,ko00562,ko01100,ko04070,map00521,map00562,map01100,map04070 ko00000,ko00001,ko00002,ko01000 Inositol monophosphatase family
LDDHDPMB_00636 8.24e-41 pup - - S ko:K13570 - ko00000,ko04121 Protein modifier that is covalently attached to lysine residues of substrate proteins, thereby targeting them for proteasomal degradation. The tagging system is termed pupylation
LDDHDPMB_00637 0.0 pafA 6.3.1.19 - O ko:K13571 - ko00000,ko00002,ko01000,ko03051 Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine
LDDHDPMB_00638 4.7e-57 hup - - L ko:K03530 - ko00000,ko03032,ko03036,ko03400 Belongs to the bacterial histone-like protein family
LDDHDPMB_00639 0.0 - - - S - - - Lysylphosphatidylglycerol synthase TM region
LDDHDPMB_00640 0.0 purB 4.3.2.2 - F ko:K01756 ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Adenylosuccinate lyase C-terminal
LDDHDPMB_00641 0.0 - - - S - - - PGAP1-like protein
LDDHDPMB_00643 1.09e-125 - - - - - - - -
LDDHDPMB_00644 1.23e-230 - - - S ko:K07114 - ko00000,ko02000 von Willebrand factor (vWF) type A domain
LDDHDPMB_00645 1.13e-249 - - - S ko:K07114 - ko00000,ko02000 von Willebrand factor (vWF) type A domain
LDDHDPMB_00646 9.9e-116 - - - - - - - -
LDDHDPMB_00647 1.98e-231 - - - S - - - Protein of unknown function DUF58
LDDHDPMB_00648 1.79e-246 moxR - - S ko:K03924 - ko00000,ko01000 ATPase family associated with various cellular activities (AAA)
LDDHDPMB_00649 1.57e-180 ung 3.2.2.27 - L ko:K03648 ko03410,ko05340,map03410,map05340 ko00000,ko00001,ko01000,ko03400 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
LDDHDPMB_00650 9.65e-114 - - - S - - - LytR cell envelope-related transcriptional attenuator
LDDHDPMB_00651 4.22e-45 cspA - - K ko:K03704 - ko00000,ko03000 'Cold-shock' DNA-binding domain
LDDHDPMB_00652 0.0 groL - - O ko:K04077 ko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152 ko00000,ko00001,ko03019,ko03029,ko03110,ko04147 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
LDDHDPMB_00653 2.56e-56 - - - S - - - Proteins of 100 residues with WXG
LDDHDPMB_00654 1.78e-202 - - - - - - - -
LDDHDPMB_00655 4.23e-171 phoP - - KT ko:K02483 - ko00000,ko02022 Response regulator receiver domain protein
LDDHDPMB_00656 0.0 phoR 2.7.13.3 - T ko:K02484 - ko00000,ko01000,ko01001,ko02022 ATPase histidine kinase DNA gyrase B HSP90 domain protein
LDDHDPMB_00657 1.15e-103 cspB - - K ko:K03704 - ko00000,ko03000 'Cold-shock' DNA-binding domain
LDDHDPMB_00658 4.88e-266 - - - S - - - Protein of unknown function (DUF3027)
LDDHDPMB_00659 6.14e-178 - - - - - - - -
LDDHDPMB_00660 1.7e-234 uspA - - T - - - Belongs to the universal stress protein A family
LDDHDPMB_00661 0.0 clpC - - O ko:K03696 ko01100,map01100 ko00000,ko03110 ATPase family associated with various cellular activities (AAA)
LDDHDPMB_00662 0.0 aspS 6.1.1.12 - J ko:K01876 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
LDDHDPMB_00663 0.0 hisS 6.1.1.21 - J ko:K01892 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Histidyl-tRNA synthetase
LDDHDPMB_00664 5.33e-294 - - - S - - - Domain of Unknown Function (DUF349)
LDDHDPMB_00665 1.4e-189 - - - S ko:K06889 - ko00000 Serine aminopeptidase, S33
LDDHDPMB_00666 1.1e-182 gluA - - E ko:K10008 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ATP-binding protein of ABC transporter for glutamate K02028
LDDHDPMB_00667 1.51e-198 gluB - - ET ko:K10005 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Belongs to the bacterial solute-binding protein 3 family
LDDHDPMB_00668 2.23e-142 gluC - - E ko:K10006 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
LDDHDPMB_00669 1.1e-256 gluD - - E ko:K10007 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
LDDHDPMB_00670 1.25e-239 - - - S - - - Polyphosphate kinase 2 (PPK2)
LDDHDPMB_00671 0.0 - - - L - - - DEAD DEAH box helicase
LDDHDPMB_00672 0.0 rarA - - L ko:K07478 - ko00000 Recombination factor protein RarA
LDDHDPMB_00673 0.0 - - - EGP - - - Major Facilitator Superfamily
LDDHDPMB_00674 0.0 - 6.2.1.3 - I ko:K01897 ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920 ko00000,ko00001,ko00002,ko01000,ko01004,ko04147 AMP-binding enzyme
LDDHDPMB_00675 8.63e-255 - - - L - - - Transposase, Mutator family
LDDHDPMB_00677 0.0 - - - - - - - -
LDDHDPMB_00678 2.23e-184 - - - E - - - Psort location Cytoplasmic, score 8.87
LDDHDPMB_00679 1.42e-85 - - - S - - - Zincin-like metallopeptidase
LDDHDPMB_00680 1.17e-93 yccF - - S - - - Inner membrane component domain
LDDHDPMB_00681 7.88e-182 tenA 3.5.99.2 - K ko:K03707 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko01000,ko03000 Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
LDDHDPMB_00682 1.9e-62 - - - J ko:K07574 - ko00000,ko03009 CRS1_YhbY
LDDHDPMB_00683 7.3e-210 - - - S - - - Aldo/keto reductase family
LDDHDPMB_00684 0.0 - - - GP ko:K16785,ko:K16786,ko:K16787 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ABC transporter, ATP-binding protein
LDDHDPMB_00685 2.94e-85 - - - U - - - Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
LDDHDPMB_00686 1.93e-172 ppgK 2.7.1.2, 2.7.1.63 - GK ko:K00845,ko:K00886 ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 ROK family
LDDHDPMB_00687 1.3e-283 - - - E - - - Aminotransferase class I and II
LDDHDPMB_00688 7.71e-193 - - - P ko:K16784 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ATPases associated with a variety of cellular activities
LDDHDPMB_00689 0.0 - - - M - - - 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
LDDHDPMB_00690 0.0 - - - S - - - Tetratricopeptide repeat
LDDHDPMB_00691 0.0 ligA 6.5.1.2 - L ko:K01972 ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430 ko00000,ko00001,ko01000,ko03032,ko03400 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
LDDHDPMB_00692 5.3e-263 mrp - - D ko:K03593 - ko00000,ko03029,ko03036 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP
LDDHDPMB_00693 3.49e-143 ykoE - - S ko:K16925 - ko00000,ko00002,ko02000 ABC-type cobalt transport system, permease component
LDDHDPMB_00694 0.0 glnA 6.3.1.2 - E ko:K01915 ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727 ko00000,ko00001,ko01000,ko04147 glutamine synthetase
LDDHDPMB_00695 1.07e-188 - - - S - - - Domain of unknown function (DUF4191)
LDDHDPMB_00696 0.0 lpdA 1.8.1.4 - C ko:K00382 ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200 br01601,ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
LDDHDPMB_00697 6.92e-134 - - - S - - - Protein of unknown function (DUF3043)
LDDHDPMB_00698 0.0 argE - - E - - - Peptidase dimerisation domain
LDDHDPMB_00699 7.53e-272 - - - T - - - Histidine kinase
LDDHDPMB_00700 1.03e-55 - - - - - - - -
LDDHDPMB_00701 6.74e-209 - - - V - - - N-Acetylmuramoyl-L-alanine amidase
LDDHDPMB_00702 1.05e-287 ytrE - - V ko:K02003,ko:K10038 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 lipoprotein transporter activity
LDDHDPMB_00703 1.08e-138 ykoE - - S ko:K16925 - ko00000,ko00002,ko02000 ABC-type cobalt transport system, permease component
LDDHDPMB_00704 0.0 ykoD - - P ko:K16785,ko:K16786,ko:K16787 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ATPases associated with a variety of cellular activities
LDDHDPMB_00705 3.03e-169 - - - V ko:K02003 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
LDDHDPMB_00706 2.42e-288 - - - V ko:K02004 - ko00000,ko00002,ko02000 FtsX-like permease family
LDDHDPMB_00707 1.8e-18 - - - V ko:K02004 - ko00000,ko00002,ko02000 FtsX-like permease family
LDDHDPMB_00708 9.87e-217 tsnR - - J ko:K03437 - ko00000,ko03016 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
LDDHDPMB_00709 3.65e-251 pheS 6.1.1.20 - J ko:K01889 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
LDDHDPMB_00710 0.0 pheT 6.1.1.20 - J ko:K01890 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Phenylalanyl-tRNA synthetase beta
LDDHDPMB_00711 5.69e-190 - - - - - - - -
LDDHDPMB_00712 1.64e-260 argC 1.2.1.38 - E ko:K00145 ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
LDDHDPMB_00713 7.16e-278 argJ 2.3.1.1, 2.3.1.35 - E ko:K00620 ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
LDDHDPMB_00714 5.02e-228 argB 2.7.2.8 - E ko:K00930 ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the acetylglutamate kinase family. ArgB subfamily
LDDHDPMB_00715 1.31e-305 argD 2.6.1.11, 2.6.1.17 - E ko:K00821 ko00220,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00220,map00300,map01100,map01110,map01120,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Aminotransferase class-III
LDDHDPMB_00716 5.7e-235 argF 2.1.3.3 - E ko:K00611 ko00220,ko01100,ko01110,ko01130,ko01230,map00220,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
LDDHDPMB_00717 1.23e-119 argR - - K ko:K03402 - ko00000,ko03000 Regulates arginine biosynthesis genes
LDDHDPMB_00718 8.47e-304 argG 6.3.4.5 - E ko:K01940 ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,ko05418,map00220,map00250,map01100,map01110,map01130,map01230,map05418 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the argininosuccinate synthase family. Type 1 subfamily
LDDHDPMB_00719 0.0 argH 4.3.2.1 - E ko:K01755 ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,map00220,map00250,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000,ko04147 argininosuccinate lyase
LDDHDPMB_00720 2.15e-198 butA 1.1.1.100, 1.1.1.304, 1.1.1.76 - IQ ko:K00059,ko:K03366 ko00061,ko00333,ko00650,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00650,map00780,map01040,map01100,map01130,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 Enoyl-(Acyl carrier protein) reductase
LDDHDPMB_00721 3.62e-116 - - - S ko:K06950 - ko00000 Metal dependent phosphohydrolases with conserved 'HD' motif.
LDDHDPMB_00722 0.0 tyrS 6.1.1.1 - J ko:K01866 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
LDDHDPMB_00723 2.75e-261 - - - L - - - Tetratricopeptide repeat
LDDHDPMB_00724 4.09e-248 - - - G - - - Haloacid dehalogenase-like hydrolase
LDDHDPMB_00725 8.69e-185 tlyA 2.1.1.226, 2.1.1.227 - J ko:K06442 - ko00000,ko01000,ko03009 Ribosomal RNA large subunit methyltransferase J
LDDHDPMB_00726 0.0 trkH - - P ko:K03498 - ko00000,ko02000 Cation transport protein
LDDHDPMB_00727 9.59e-152 trkA - - P ko:K03499 - ko00000,ko02000 TrkA-N domain
LDDHDPMB_00728 8.73e-236 nadK 2.7.1.23 - H ko:K00858 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko01000 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
LDDHDPMB_00729 0.0 recN - - L ko:K03631 - ko00000,ko03400 May be involved in recombinational repair of damaged DNA
LDDHDPMB_00730 3.85e-166 - - - S - - - Haloacid dehalogenase-like hydrolase
LDDHDPMB_00731 0.0 thrC 4.2.3.1 - E ko:K01733 ko00260,ko00750,ko01100,ko01110,ko01120,ko01230,map00260,map00750,map01100,map01110,map01120,map01230 ko00000,ko00001,ko00002,ko01000 Threonine synthase N terminus
LDDHDPMB_00732 4.6e-307 proA 1.2.1.41 - E ko:K00147 ko00330,ko00332,ko01100,ko01110,ko01130,ko01230,map00330,map00332,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
LDDHDPMB_00733 3.59e-148 - - - - - - - -
LDDHDPMB_00734 1.06e-171 nadD 2.7.7.18 - H ko:K00969 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
LDDHDPMB_00735 2.27e-246 prs 2.7.6.1 - F ko:K00948 ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
LDDHDPMB_00737 0.0 glmU 2.3.1.157, 2.7.7.23 - M ko:K04042 ko00520,ko01100,ko01130,map00520,map01100,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
LDDHDPMB_00738 4.35e-94 rsfS - - J ko:K09710 - ko00000,ko03009 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
LDDHDPMB_00739 6.21e-159 gpmB 3.1.3.85, 5.4.2.11 - G ko:K01834,ko:K22306 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Phosphoglycerate mutase family
LDDHDPMB_00740 3.21e-134 - - - - - - - -
LDDHDPMB_00743 9.97e-94 pdxH - - S ko:K07006 - ko00000 Pfam:Pyridox_oxidase
LDDHDPMB_00744 1.72e-206 gpmB 3.1.3.85, 5.4.2.11 - G ko:K01834,ko:K22306 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Phosphoglycerate mutase family
LDDHDPMB_00745 5.76e-217 corA - - P ko:K03284 - ko00000,ko02000 CorA-like Mg2+ transporter protein
LDDHDPMB_00746 5.23e-213 - - - ET ko:K10005 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Bacterial periplasmic substrate-binding proteins
LDDHDPMB_00747 0.0 leuS 6.1.1.4 - J ko:K01869 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Belongs to the class-I aminoacyl-tRNA synthetase family
LDDHDPMB_00748 2.36e-171 comEA - - L ko:K02237 - ko00000,ko00002,ko02044 Helix-hairpin-helix motif
LDDHDPMB_00749 0.0 comEC - - S ko:K02238 - ko00000,ko00002,ko02044 Competence protein
LDDHDPMB_00750 2.44e-239 holA 2.7.7.7 - L ko:K02340 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase III delta subunit
LDDHDPMB_00751 1.84e-146 tsaE - - S ko:K06925 - ko00000,ko03016 Threonylcarbamoyl adenosine biosynthesis protein TsaE
LDDHDPMB_00752 7.23e-202 yeaZ - - O ko:K14742 - ko00000,ko03016 Glycoprotease family
LDDHDPMB_00753 3.49e-118 rimI 2.3.1.128 - K ko:K03789 - ko00000,ko01000,ko03009 FR47-like protein
LDDHDPMB_00754 7.97e-251 tsaD 2.3.1.234 - O ko:K01409 - ko00000,ko01000,ko03016 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
LDDHDPMB_00756 1.79e-117 - - - - - - - -
LDDHDPMB_00758 1.16e-81 - - - - - - - -
LDDHDPMB_00759 1.13e-137 - - - M - - - Peptidase family M23
LDDHDPMB_00760 0.0 - - - G - - - ABC transporter substrate-binding protein
LDDHDPMB_00761 1.2e-305 icd 1.1.1.42 - C ko:K00031 ko00020,ko00480,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,ko04146,map00020,map00480,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230,map04146 br01601,ko00000,ko00001,ko00002,ko01000 Belongs to the isocitrate and isopropylmalate dehydrogenases family
LDDHDPMB_00762 2.97e-266 guaB3 1.1.1.205 - F ko:K00088 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko04147 IMP dehydrogenase family protein
LDDHDPMB_00764 0.0 fadD3 6.2.1.3 - I ko:K01897 ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920 ko00000,ko00001,ko00002,ko01000,ko01004,ko04147 long-chain-fatty acid CoA ligase
LDDHDPMB_00765 5.55e-111 def 3.5.1.88 - J ko:K01462 - ko00000,ko01000 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
LDDHDPMB_00766 1.03e-208 rpsB - - J ko:K02967 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the universal ribosomal protein uS2 family
LDDHDPMB_00767 2.5e-177 tsf - - J ko:K02357 - ko00000,ko03012,ko03029 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
LDDHDPMB_00768 5.41e-172 pyrH 2.7.4.22 - F ko:K09903 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko01000 Catalyzes the reversible phosphorylation of UMP to UDP
LDDHDPMB_00769 1.16e-119 frr - - J ko:K02838 - ko00000,ko03012 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
LDDHDPMB_00770 5.59e-226 cdsA 2.7.7.41 - I ko:K00981 ko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070 ko00000,ko00001,ko00002,ko01000 Cytidylyltransferase family
LDDHDPMB_00771 3.81e-294 rlmN 2.1.1.192 - J ko:K06941 - ko00000,ko01000,ko03009 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs
LDDHDPMB_00772 7.65e-136 - - - K - - - WHG domain
LDDHDPMB_00773 3.54e-149 - - - V ko:K01990 - ko00000,ko00002,ko02000 ATPases associated with a variety of cellular activities
LDDHDPMB_00774 4.44e-173 - - - S ko:K01992 - ko00000,ko00002,ko02000 ABC-2 type transporter
LDDHDPMB_00775 2.11e-178 hisF 4.1.3.27 - E ko:K01657,ko:K02500 ko00340,ko00400,ko00405,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00340,map00400,map00405,map01100,map01110,map01130,map01230,map02024,map02025 ko00000,ko00001,ko00002,ko01000 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
LDDHDPMB_00776 6.65e-100 hisI 3.5.4.19, 3.6.1.31 - E ko:K01496,ko:K11755 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
LDDHDPMB_00777 0.0 trpE 4.1.3.27 - E ko:K01657 ko00400,ko00405,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00400,map00405,map01100,map01110,map01130,map01230,map02024,map02025 ko00000,ko00001,ko00002,ko01000 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
LDDHDPMB_00778 4.39e-148 - - - L - - - Uracil DNA glycosylase superfamily
LDDHDPMB_00779 3.13e-11 - - - - - - - -
LDDHDPMB_00780 0.00074 - - - - - - - -
LDDHDPMB_00781 0.0 trpB 4.2.1.20 - E ko:K01696 ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
LDDHDPMB_00782 3.55e-206 trpA 4.2.1.20 - E ko:K01695 ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
LDDHDPMB_00783 4.78e-235 lgt - - M - - - Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
LDDHDPMB_00784 2.68e-157 rpe 5.1.3.1 - G ko:K01783 ko00030,ko00040,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Ribulose-phosphate 3-epimerase
LDDHDPMB_00785 3.18e-55 hisE 3.6.1.31 - E ko:K01523 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Phosphoribosyl-ATP pyrophosphohydrolase
LDDHDPMB_00786 5.79e-201 hisG 2.4.2.17 - F ko:K00765,ko:K02502 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 ATP phosphoribosyltransferase
LDDHDPMB_00787 4.93e-141 pgsA2 2.7.8.41, 2.7.8.5 - I ko:K00995,ko:K08744 ko00564,ko01100,map00564,map01100 ko00000,ko00001,ko01000 Belongs to the CDP-alcohol phosphatidyltransferase class-I family
LDDHDPMB_00788 2.38e-225 - - - S - - - Bacterial protein of unknown function (DUF881)
LDDHDPMB_00789 1.09e-63 sbp - - S - - - Protein of unknown function (DUF1290)
LDDHDPMB_00790 1.81e-197 - - - S - - - Bacterial protein of unknown function (DUF881)
LDDHDPMB_00791 2.66e-97 garA - - T - - - Inner membrane component of T3SS, cytoplasmic domain
LDDHDPMB_00792 2.48e-170 merR2 - - K - - - helix_turn_helix, mercury resistance
LDDHDPMB_00793 5.12e-91 - - - - - - - -
LDDHDPMB_00794 3.58e-85 crcB - - D ko:K06199 - ko00000,ko02000 Important for reducing fluoride concentration in the cell, thus reducing its toxicity
LDDHDPMB_00795 5e-88 - - - D ko:K06199 - ko00000,ko02000 Important for reducing fluoride concentration in the cell, thus reducing its toxicity
LDDHDPMB_00796 2.61e-179 nt5e 3.1.3.18 - S ko:K01091 ko00630,ko01100,ko01110,ko01130,map00630,map01100,map01110,map01130 ko00000,ko00001,ko01000 HAD-hyrolase-like
LDDHDPMB_00797 5.49e-82 rbpA - - K - - - Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters
LDDHDPMB_00798 0.0 helY - - L ko:K03727 - ko00000,ko01000 DEAD DEAH box helicase
LDDHDPMB_00799 2.35e-67 - - - - - - - -
LDDHDPMB_00800 0.0 - - - K - - - WYL domain
LDDHDPMB_00801 0.0 ugp 2.7.7.9 - G ko:K00963 ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130 ko00000,ko00001,ko00002,ko01000 UTP-glucose-1-phosphate uridylyltransferase
LDDHDPMB_00803 0.0 der - - F ko:K03977 - ko00000,ko03009 GTPase that plays an essential role in the late steps of ribosome biogenesis
LDDHDPMB_00804 7.04e-186 rluB 5.4.99.19, 5.4.99.22 - J ko:K06178,ko:K06183 - ko00000,ko01000,ko03009 Belongs to the pseudouridine synthase RsuA family
LDDHDPMB_00805 3.45e-221 - - - U ko:K06188 - ko00000,ko02000 Belongs to the MIP aquaporin (TC 1.A.8) family
LDDHDPMB_00806 5.52e-37 - - - - - - - -
LDDHDPMB_00807 0.0 purH 2.1.2.3, 3.5.4.10 - F ko:K00602 ko00230,ko00670,ko01100,ko01110,ko01130,ko01523,map00230,map00670,map01100,map01110,map01130,map01523 ko00000,ko00001,ko00002,ko01000,ko04147 Bifunctional purine biosynthesis protein PurH
LDDHDPMB_00808 0.0 - - - - - - - -
LDDHDPMB_00809 1.85e-212 sucD 6.2.1.5 - C ko:K01902 ko00020,ko00640,ko00660,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00640,map00660,map00720,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
LDDHDPMB_00810 5.72e-283 sucC 6.2.1.5 - F ko:K01903 ko00020,ko00640,ko00660,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00640,map00660,map00720,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit
LDDHDPMB_00811 2.2e-133 apt 2.4.2.7 - F ko:K00759 ko00230,ko01100,map00230,map01100 ko00000,ko00001,ko01000,ko04147 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
LDDHDPMB_00812 1.9e-72 yajC - - U ko:K03210 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Preprotein translocase subunit
LDDHDPMB_00813 1.2e-260 ruvB 3.6.4.12 - L ko:K03551 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
LDDHDPMB_00814 5.91e-141 ruvA 3.6.4.12 - L ko:K03550 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
LDDHDPMB_00815 6.75e-132 ruvC 3.1.22.4 - L ko:K01159 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
LDDHDPMB_00816 6.09e-175 yebC - - K - - - transcriptional regulatory protein
LDDHDPMB_00817 1.34e-240 pimA 2.4.1.345 GT4 M ko:K08256 - ko00000,ko01000,ko01003 Glycosyl transferases group 1
LDDHDPMB_00818 4.4e-247 htrB 2.3.1.265 - M ko:K22311 - ko00000,ko01000 Bacterial lipid A biosynthesis acyltransferase
LDDHDPMB_00819 8.83e-151 pgsA1 2.7.8.11, 2.7.8.5 - I ko:K00995,ko:K00999 ko00562,ko00564,ko01100,ko04070,map00562,map00564,map01100,map04070 ko00000,ko00001,ko01000 CDP-alcohol phosphatidyltransferase
LDDHDPMB_00820 0.0 thrS 6.1.1.3 - J ko:K01868 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
LDDHDPMB_00821 3.74e-127 - - - S - - - ATPases associated with a variety of cellular activities
LDDHDPMB_00823 5.2e-123 - 2.3.1.57 - K ko:K22441 - ko00000,ko01000 Acetyltransferase (GNAT) domain
LDDHDPMB_00824 2.65e-32 - - - - - - - -
LDDHDPMB_00830 4.49e-199 - - - S - - - PAC2 family
LDDHDPMB_00831 1.67e-191 uppP 3.6.1.27 - V ko:K06153 ko00550,map00550 ko00000,ko00001,ko01000,ko01011 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
LDDHDPMB_00832 2.17e-204 - - - G - - - Fructosamine kinase
LDDHDPMB_00833 2.49e-279 dnaJ - - O ko:K03686 - ko00000,ko03029,ko03110 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
LDDHDPMB_00834 2.8e-256 hrcA - - K ko:K03705 - ko00000,ko03000 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
LDDHDPMB_00835 0.0 tkt 2.2.1.1 - H ko:K00615 ko00030,ko00710,ko01051,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01051,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the transketolase family
LDDHDPMB_00836 9.8e-258 tal 2.2.1.2 - H ko:K00616 ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
LDDHDPMB_00837 3.06e-109 - - - S - - - PFAM Pentapeptide repeats (8 copies)
LDDHDPMB_00838 4.1e-293 - 2.6.1.1, 2.6.1.2, 2.6.1.66 - E ko:K00812,ko:K00841,ko:K08969,ko:K10907,ko:K14260 ko00220,ko00250,ko00270,ko00290,ko00300,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00290,map00300,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Aminotransferase class I and II
LDDHDPMB_00839 1.01e-117 - - - K - - - helix_turn_helix ASNC type
LDDHDPMB_00840 0.0 aspC 2.6.1.1, 2.6.1.2, 2.6.1.66 - E ko:K00812,ko:K08969,ko:K10907,ko:K14260 ko00220,ko00250,ko00270,ko00290,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00290,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Aminotransferase, class I II
LDDHDPMB_00841 7.54e-207 - - - S - - - Sucrose-6F-phosphate phosphohydrolase
LDDHDPMB_00842 2.87e-43 secG - - U ko:K03075 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Preprotein translocase SecG subunit
LDDHDPMB_00843 2.06e-194 tpiA 5.3.1.1 - G ko:K01803 ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko04147 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
LDDHDPMB_00844 2.34e-284 pgk 2.7.2.3, 5.3.1.1 - F ko:K00927,ko:K01803 ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko04147 Phosphoglycerate kinase
LDDHDPMB_00845 2.67e-224 whiA - - K ko:K09762 - ko00000 May be required for sporulation
LDDHDPMB_00846 1.72e-224 yvcJ - - S ko:K06958 - ko00000,ko03019 Displays ATPase and GTPase activities
LDDHDPMB_00847 1.28e-225 aroE 1.1.1.25 - E ko:K00014 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Shikimate dehydrogenase substrate binding domain
LDDHDPMB_00848 0.0 uvrC - - L ko:K03703 ko03420,map03420 ko00000,ko00001,ko03400 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
LDDHDPMB_00849 0.0 uvrA - - L ko:K03701 ko03420,map03420 ko00000,ko00001,ko03400 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
LDDHDPMB_00851 2.31e-230 - - - - - - - -
LDDHDPMB_00852 1.57e-127 nnrE - - L - - - Uracil DNA glycosylase superfamily
LDDHDPMB_00853 1.93e-157 - - - S ko:K06999 - ko00000 Phospholipase/Carboxylesterase
LDDHDPMB_00854 0.0 ybiT - - S ko:K06158 - ko00000,ko03012 ABC transporter
LDDHDPMB_00855 3.78e-249 - - - P - - - Cation efflux family
LDDHDPMB_00856 3.09e-187 - 4.1.1.44 - S ko:K01607 ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220 ko00000,ko00001,ko01000 Carboxymuconolactone decarboxylase family
LDDHDPMB_00857 2.09e-236 cbh 3.5.1.24 - M ko:K01442 ko00120,ko00121,ko01100,map00120,map00121,map01100 ko00000,ko00001,ko01000 Linear amide C-N hydrolase, choloylglycine hydrolase family protein
LDDHDPMB_00858 0.0 nnrD 4.2.1.136, 5.1.99.6 - H ko:K17758,ko:K17759 - ko00000,ko01000 Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
LDDHDPMB_00859 5e-140 ahpC 1.11.1.15 - O ko:K03386 ko04214,map04214 ko00000,ko00001,ko01000,ko04147 C-terminal domain of 1-Cys peroxiredoxin
LDDHDPMB_00860 0.0 - 1.8.1.9 - C ko:K00384 ko00450,map00450 ko00000,ko00001,ko01000 Thioredoxin domain
LDDHDPMB_00861 7.4e-223 - - - K - - - Bacterial regulatory helix-turn-helix protein, lysR family
LDDHDPMB_00862 5.22e-158 - 3.8.1.2 - S ko:K01560 ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120 ko00000,ko00001,ko01000 Haloacid dehalogenase-like hydrolase
LDDHDPMB_00863 1.23e-243 - - - S - - - Protein conserved in bacteria
LDDHDPMB_00864 9.71e-232 - - - O - - - ADP-ribosylglycohydrolase
LDDHDPMB_00865 1.2e-76 - - - K - - - HxlR-like helix-turn-helix
LDDHDPMB_00866 1.25e-66 - - - L - - - NUDIX domain
LDDHDPMB_00867 6.8e-104 ypeA 2.3.1.1 - K ko:K22477 ko00220,ko01210,ko01230,map00220,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score 8.87
LDDHDPMB_00868 5.35e-160 pyrE 2.4.2.10 - F ko:K00762 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
LDDHDPMB_00869 8.93e-241 pyrD 1.3.1.14 - F ko:K17828 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
LDDHDPMB_00870 3.32e-202 pyrK - - C ko:K02823 ko00240,ko01100,map00240,map01100 ko00000,ko00001 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B
LDDHDPMB_00871 1.68e-225 pyrF 4.1.1.23 - F ko:K01591 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the OMP decarboxylase family. Type 2 subfamily
LDDHDPMB_00872 0.0 pyrC 3.5.2.3 - F ko:K01465 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
LDDHDPMB_00873 1.83e-96 pyrI - - F ko:K00610 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002 Aspartate carbamoyltransferase regulatory chain, allosteric domain protein
LDDHDPMB_00874 6.91e-242 pyrB 2.1.3.2 - F ko:K00609 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the ATCase OTCase family
LDDHDPMB_00875 1.33e-115 - - - S - - - Domain of unknown function (DUF4186)
LDDHDPMB_00876 0.0 glnE 2.7.7.42, 2.7.7.89 - H ko:K00982 - ko00000,ko01000 Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell
LDDHDPMB_00877 6.6e-206 metF 1.5.1.20 - E ko:K00297 ko00670,ko00720,ko01100,ko01120,ko01200,ko01523,map00670,map00720,map01100,map01120,map01200,map01523 ko00000,ko00001,ko00002,ko01000 Methylenetetrahydrofolate reductase
LDDHDPMB_00878 0.0 metE 2.1.1.14 - E ko:K00549 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
LDDHDPMB_00879 1.07e-127 sixA - - T ko:K08296 - ko00000,ko01000 Phosphoglycerate mutase family
LDDHDPMB_00880 7.41e-254 trmI 2.1.1.219, 2.1.1.220 - J ko:K07442 - ko00000,ko01000,ko03016 Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
LDDHDPMB_00881 1.41e-203 ylmA 3.6.3.34 - P ko:K02013 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ATPases associated with a variety of cellular activities
LDDHDPMB_00882 2.02e-311 glgA 2.4.1.342 GT4 G ko:K16148 ko00500,ko01100,map00500,map01100 ko00000,ko00001,ko01000,ko01003 Starch synthase catalytic domain
LDDHDPMB_00883 4.8e-114 bcp 1.11.1.15 - O ko:K03564 - ko00000,ko01000 Redoxin
LDDHDPMB_00884 1.11e-103 - - - - - - - -
LDDHDPMB_00885 0.0 gltD 1.4.1.13, 1.4.1.14 - C ko:K00266 ko00250,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00250,map00910,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko01000 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
LDDHDPMB_00886 0.0 gltB 1.4.1.13, 1.4.1.14, 1.4.7.1 - E ko:K00265,ko:K00284 ko00250,ko00630,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00250,map00630,map00910,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko01000 glutamate synthase NADPH large subunit
LDDHDPMB_00887 0.0 hemN - - H - - - Involved in the biosynthesis of porphyrin-containing compound
LDDHDPMB_00888 0.0 lepA - - M ko:K03596 ko05134,map05134 ko00000,ko00001 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
LDDHDPMB_00889 1.36e-46 rpsT - - J ko:K02968 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds directly to 16S ribosomal RNA
LDDHDPMB_00890 1.74e-179 - - - S - - - UPF0126 domain
LDDHDPMB_00891 2.14e-289 ilvE 2.6.1.42 - E ko:K00826 ko00270,ko00280,ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00270,map00280,map00290,map00770,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Amino-transferase class IV
LDDHDPMB_00892 6.37e-139 ctc - - J ko:K02897 ko03010,map03010 ko00000,ko00001,ko00002,ko03011 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
LDDHDPMB_00893 2.54e-249 - - - S ko:K06889 - ko00000 alpha beta
LDDHDPMB_00894 0.0 pntB 1.6.1.2 - C ko:K00325 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko01000 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
LDDHDPMB_00895 4.73e-62 pntAB 1.6.1.2 - C ko:K00324 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko01000 4TM region of pyridine nucleotide transhydrogenase, mitoch
LDDHDPMB_00896 2.51e-258 pntA 1.6.1.2 - C ko:K00324 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko01000 NAD(P) transhydrogenase subunit alpha part 1 K00324
LDDHDPMB_00897 0.0 fadD2 6.2.1.3 - I ko:K01897 ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920 ko00000,ko00001,ko00002,ko01000,ko01004,ko04147 AMP-binding enzyme
LDDHDPMB_00898 6.02e-232 era - - S ko:K03595 - ko00000,ko03009,ko03029 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
LDDHDPMB_00899 0.0 corC - - S - - - CBS domain
LDDHDPMB_00900 1.5e-134 ybeY - - S ko:K07042 - ko00000,ko03009 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
LDDHDPMB_00901 1.28e-274 phoH - - T ko:K06217 - ko00000 PhoH-like protein
LDDHDPMB_00902 2.19e-77 hit - - FG ko:K02503 - ko00000,ko04147 Scavenger mRNA decapping enzyme C-term binding
LDDHDPMB_00903 7.71e-185 - 2.1.1.193 - J ko:K09761 - ko00000,ko01000,ko03009 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
LDDHDPMB_00905 2.75e-211 spoU2 - - J - - - SpoU rRNA Methylase family
LDDHDPMB_00906 9.8e-171 tnp3503b - - L - - - Transposase and inactivated derivatives
LDDHDPMB_00907 2.43e-284 glgC 2.7.7.27 - H ko:K00975 ko00500,ko00520,ko01100,ko01110,ko02026,map00500,map00520,map01100,map01110,map02026 ko00000,ko00001,ko00002,ko01000 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
LDDHDPMB_00908 5.86e-121 - - - S - - - Iron-sulfur cluster assembly protein
LDDHDPMB_00909 3.17e-135 iscU - - C ko:K04488 - ko00000 SUF system FeS assembly protein, NifU family
LDDHDPMB_00910 2.17e-305 sufS 2.8.1.7, 4.4.1.16 - E ko:K11717 ko00450,ko01100,map00450,map01100 ko00000,ko00001,ko01000 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
LDDHDPMB_00911 8.04e-184 sufC - - O ko:K09013 - ko00000,ko02000 FeS assembly ATPase SufC
LDDHDPMB_00912 8.08e-300 sufD - - O ko:K09015 - ko00000 FeS assembly protein SufD
LDDHDPMB_00913 0.0 sufB - - O ko:K09014 - ko00000 FeS assembly protein SufB
LDDHDPMB_00914 0.0 - - - S - - - L,D-transpeptidase catalytic domain
LDDHDPMB_00915 0.0 pyrG 6.3.4.2 - F ko:K01937 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
LDDHDPMB_00916 3.78e-73 - 3.2.1.1, 3.2.1.41 CBM48,GH13 M ko:K01176,ko:K01200 ko00500,ko01100,ko01110,ko04973,map00500,map01100,map01110,map04973 ko00000,ko00001,ko01000 Aamy_C
LDDHDPMB_00917 1.35e-237 pulA 3.2.1.41, 3.2.1.68 CBM48,GH13 G ko:K01200,ko:K01214 ko00500,ko01100,ko01110,map00500,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Belongs to the glycosyl hydrolase 13 family
LDDHDPMB_00918 2.25e-109 - 3.2.1.1, 3.2.1.41 CBM48,GH13 M ko:K01176,ko:K01200 ko00500,ko01100,ko01110,ko04973,map00500,map01100,map01110,map04973 ko00000,ko00001,ko01000 Aamy_C
LDDHDPMB_00919 7.78e-125 - 3.2.1.1, 3.2.1.41 CBM48,GH13 G ko:K01176,ko:K01200 ko00500,ko01100,ko01110,ko04973,map00500,map01100,map01110,map04973 ko00000,ko00001,ko01000 Alpha amylase, catalytic domain
LDDHDPMB_00922 6.74e-281 - - - - - - - -
LDDHDPMB_00923 1.49e-286 - - - - - - - -
LDDHDPMB_00924 1.78e-105 - - - - - - - -
LDDHDPMB_00925 2.23e-105 - - - - - - - -
LDDHDPMB_00926 1.64e-242 - - - - - - - -
LDDHDPMB_00927 2.03e-92 aroQ 4.2.1.10 - E ko:K03786 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes a trans-dehydration via an enolate intermediate
LDDHDPMB_00928 0.0 aroB 2.7.1.71, 4.2.3.4 - H ko:K01735,ko:K13829 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
LDDHDPMB_00929 1.45e-280 aroC 4.2.3.5 - E ko:K01736 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
LDDHDPMB_00931 2.13e-264 mltG - - S ko:K07082 - ko00000 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
LDDHDPMB_00932 3.78e-112 ruvX - - L ko:K07447 - ko00000,ko01000 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
LDDHDPMB_00933 0.0 alaS 6.1.1.7 - J ko:K01872 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
LDDHDPMB_00934 6.54e-46 - - - - - - - -
LDDHDPMB_00935 1.31e-84 - - - S - - - Bacterial protein of unknown function (DUF948)
LDDHDPMB_00936 7.34e-165 - 5.4.2.12 - G ko:K15634 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Phosphoglycerate mutase family
LDDHDPMB_00937 2.01e-81 - - - S ko:K08972 - ko00000 Mycobacterial 4 TMS phage holin, superfamily IV
LDDHDPMB_00938 3.61e-141 rpsD - - J ko:K02986 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
LDDHDPMB_00939 0.0 pcrA 3.6.4.12 - L ko:K03657 ko03420,ko03430,map03420,map03430 ko00000,ko00001,ko01000,ko03400 DNA helicase
LDDHDPMB_00940 8.71e-119 xpt 2.4.2.22 - F ko:K03816 ko00230,ko01100,ko01110,map00230,map01100,map01110 ko00000,ko00001,ko01000 Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
LDDHDPMB_00941 0.0 pbuX - - F ko:K03458 - ko00000 Permease family
LDDHDPMB_00942 1.5e-151 - - - M - - - Protein of unknown function (DUF3737)
LDDHDPMB_00943 6.73e-26 - 4.4.1.8 - E ko:K14155 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 ko00000,ko00001,ko01000,ko01007 Aminotransferase, class I II
LDDHDPMB_00944 1.51e-226 - 4.4.1.8 - E ko:K14155 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 ko00000,ko00001,ko01000,ko01007 Aminotransferase, class I II
LDDHDPMB_00945 5.4e-239 - - - K - - - TRANSCRIPTIONal
LDDHDPMB_00946 0.0 - 3.2.1.1 GH13 G ko:K01176 ko00500,ko01100,ko04973,map00500,map01100,map04973 ko00000,ko00001,ko01000 Glycosyl hydrolase family 70
LDDHDPMB_00947 1.07e-181 - - - S ko:K07010 - ko00000,ko01002 Peptidase C26
LDDHDPMB_00948 1.63e-110 - - - S ko:K19055 - ko00000,ko01000,ko03016 Aminoacyl-tRNA editing domain
LDDHDPMB_00949 1.89e-133 - - - S - - - ABC-2 family transporter protein
LDDHDPMB_00950 2.02e-214 - - - V ko:K01990 - ko00000,ko00002,ko02000 ATPases associated with a variety of cellular activities
LDDHDPMB_00951 1.42e-86 - - - K ko:K07979 - ko00000,ko03000 helix_turn_helix gluconate operon transcriptional repressor
LDDHDPMB_00952 5.23e-244 - - - K - - - Helix-turn-helix XRE-family like proteins
LDDHDPMB_00953 1.88e-214 add1 3.5.4.4 - F ko:K01488 ko00230,ko01100,ko05340,map00230,map01100,map05340 ko00000,ko00001,ko01000 Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
LDDHDPMB_00954 3.44e-182 - - - - - - - -
LDDHDPMB_00955 1.23e-67 - 4.2.99.21 - E ko:K04782 ko01053,ko01110,ko01130,map01053,map01110,map01130 ko00000,ko00001,ko01000 Chorismate mutase type II
LDDHDPMB_00956 6.73e-207 - - - E - - - -acetyltransferase
LDDHDPMB_00957 1.82e-93 - - - K - - - Acetyltransferase (GNAT) family
LDDHDPMB_00958 3.03e-140 - - - F - - - adenylate kinase activity
LDDHDPMB_00959 8.85e-85 - - - S ko:K07133 - ko00000 AAA domain
LDDHDPMB_00960 0.0 tetM - - J ko:K18220 - br01600,ko00000,ko01504 elongation factor G
LDDHDPMB_00961 5.18e-228 - - - L ko:K07481 - ko00000 Transposase domain (DUF772)
LDDHDPMB_00962 4.41e-92 - - - K - - - sequence-specific DNA binding
LDDHDPMB_00963 0.0 guaA 6.3.5.2 - F ko:K01951 ko00230,ko00983,ko01100,map00230,map00983,map01100 ko00000,ko00001,ko00002,ko01000,ko01002 Catalyzes the synthesis of GMP from XMP
LDDHDPMB_00964 0.0 xfp 4.1.2.22, 4.1.2.9 - G ko:K01621 ko00030,ko00710,ko01100,ko01120,map00030,map00710,map01100,map01120 ko00000,ko00001,ko01000 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase
LDDHDPMB_00965 0.0 pta 2.3.1.8 - C ko:K13788 ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 phosphate acetyltransferase
LDDHDPMB_00966 4.94e-297 ackA 2.7.2.1 - H ko:K00925 ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
LDDHDPMB_00967 0.0 aroA 2.5.1.19 - E ko:K00800 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
LDDHDPMB_00969 1.05e-295 - - - - - - - -
LDDHDPMB_00970 0.0 glgX 3.2.1.68 CBM48,GH13 G ko:K01214 ko00500,ko01100,ko01110,map00500,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Belongs to the glycosyl hydrolase 13 family
LDDHDPMB_00971 3.06e-158 - - - L - - - NUDIX domain
LDDHDPMB_00972 3.04e-235 - - - L - - - NIF3 (NGG1p interacting factor 3)
LDDHDPMB_00973 0.0 polA 2.7.7.7 - L ko:K02335 ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440 ko00000,ko00001,ko01000,ko03032,ko03400 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
LDDHDPMB_00975 7.75e-158 pdtaR - - T ko:K22010 - ko00000,ko00002,ko02022 Response regulator receiver domain protein
LDDHDPMB_00976 6.77e-153 aspA 3.6.1.13 - L ko:K01515 ko00230,map00230 ko00000,ko00001,ko01000 NUDIX domain
LDDHDPMB_00978 0.0 pyk 2.7.1.40 - G ko:K00873 ko00010,ko00230,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko04930,ko05165,ko05203,ko05230,map00010,map00230,map00620,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map04930,map05165,map05203,map05230 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Pyruvate kinase
LDDHDPMB_00979 5.79e-230 terC - - P ko:K05794 - ko00000 Integral membrane protein, TerC family
LDDHDPMB_00980 0.0 uvrB - - L ko:K03702 ko03420,map03420 ko00000,ko00001,ko03400 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
LDDHDPMB_00981 1.4e-152 coaE 2.7.1.24 - H ko:K00859 ko00770,ko01100,map00770,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
LDDHDPMB_00982 4.47e-315 rpsA - - J ko:K02945 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal protein S1
LDDHDPMB_00983 3.33e-211 folD 1.5.1.5, 3.5.4.9 - F ko:K01491 ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
LDDHDPMB_00984 1.26e-236 - - - P ko:K02077 - ko00000,ko00002,ko02000 Zinc-uptake complex component A periplasmic
LDDHDPMB_00985 4.24e-217 - - - P ko:K02074 - ko00000,ko00002,ko02000 ATPases associated with a variety of cellular activities
LDDHDPMB_00986 2.27e-185 znuB - - U ko:K02075 - ko00000,ko00002,ko02000 ABC 3 transport family
LDDHDPMB_00987 7.88e-116 ispF 2.7.7.60, 4.6.1.12 - H ko:K01770,ko:K12506 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP)
LDDHDPMB_00988 1.02e-132 carD - - K ko:K07736 - ko00000,ko03000 CarD-like/TRCF domain
LDDHDPMB_00989 0.0 glgB 2.4.1.18 CBM48,GH13 G ko:K00700 ko00500,ko01100,ko01110,map00500,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko04147 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
LDDHDPMB_00990 3.21e-168 cseB - - T - - - Response regulator receiver domain protein
LDDHDPMB_00991 8.38e-258 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
LDDHDPMB_00992 3.71e-187 pyrE_1 - - S - - - Phosphoribosyl transferase domain
LDDHDPMB_00993 1.75e-197 - - - T - - - Eukaryotic phosphomannomutase
LDDHDPMB_00994 1.6e-72 - - - S - - - Zincin-like metallopeptidase
LDDHDPMB_00995 0.0 - - - - - - - -
LDDHDPMB_00996 0.0 - - - S - - - Glycosyl transferase, family 2
LDDHDPMB_00997 0.0 yvhJ - - K - - - Cell envelope-related transcriptional attenuator domain
LDDHDPMB_00998 8.99e-234 lytR2 - - K - - - Cell envelope-related transcriptional attenuator domain
LDDHDPMB_00999 1.17e-313 - - - D ko:K03466 - ko00000,ko03036 FtsK/SpoIIIE family
LDDHDPMB_01000 5.33e-61 whiB - - K ko:K18955 - ko00000,ko03000 Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA
LDDHDPMB_01001 0.0 pdtaS 2.7.13.3 - T ko:K00936 - ko00000,ko00002,ko01000,ko01001,ko02022 ATPase histidine kinase DNA gyrase B HSP90 domain protein
LDDHDPMB_01002 6.93e-193 hlyIII - - S ko:K11068 - ko00000,ko02042 Haemolysin-III related
LDDHDPMB_01003 3.4e-105 greA - - K ko:K03624 - ko00000,ko03021 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
LDDHDPMB_01004 2.24e-97 fkbP 5.2.1.8 - G ko:K01802 - ko00000,ko01000 Peptidyl-prolyl cis-trans
LDDHDPMB_01005 0.0 sdaA 4.3.1.17 - E ko:K01752 ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230 ko00000,ko00001,ko01000 Serine dehydratase alpha chain
LDDHDPMB_01006 1.24e-136 - - - - - - - -
LDDHDPMB_01008 2.94e-238 ppx 3.6.1.11, 3.6.1.40 - FP ko:K01524 ko00230,map00230 ko00000,ko00001,ko01000 Ppx/GppA phosphatase family
LDDHDPMB_01009 2.96e-144 - - - S ko:K09009 - ko00000 Protein of unknown function (DUF501)
LDDHDPMB_01010 3.48e-128 - - - D - - - Septum formation initiator
LDDHDPMB_01011 8.66e-313 eno 4.2.1.11 - G ko:K01689 ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066 ko00000,ko00001,ko00002,ko01000,ko03019,ko04147 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
LDDHDPMB_01012 3.38e-209 - - - U ko:K15554 ko00920,ko02010,map00920,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
LDDHDPMB_01013 1.14e-224 - - - P ko:K15553 ko00920,ko02010,map00920,map02010 ko00000,ko00001,ko00002,ko02000 NMT1-like family
LDDHDPMB_01014 3.28e-165 ssuB - - P ko:K15555 ko00920,ko02010,map00920,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ATPases associated with a variety of cellular activities
LDDHDPMB_01016 0.0 mfd - - L ko:K03723 ko03420,map03420 ko00000,ko00001,ko01000,ko03400 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
LDDHDPMB_01017 3.18e-133 pth 3.1.1.29 - J ko:K01056 - ko00000,ko01000,ko03012 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
LDDHDPMB_01018 7.24e-142 - 2.3.1.183 - M ko:K03823 ko00440,ko01130,map00440,map01130 ko00000,ko00001,ko01000 Acetyltransferase (GNAT) domain
LDDHDPMB_01019 0.0 - - - S ko:K09118 - ko00000 Uncharacterised protein family (UPF0182)
LDDHDPMB_01020 9.99e-300 - 3.2.1.52 - G ko:K01207 ko00520,ko00531,ko01100,ko01501,map00520,map00531,map01100,map01501 ko00000,ko00001,ko00002,ko01000 Glycosyl hydrolase family 3 N-terminal domain protein
LDDHDPMB_01021 5.3e-22 - - - S - - - Selenoprotein, putative
LDDHDPMB_01022 0.0 cstA - - T ko:K06200 - ko00000 5TM C-terminal transporter carbon starvation CstA
LDDHDPMB_01023 2.88e-43 - - - V ko:K06147 - ko00000,ko02000 ABC transporter transmembrane region
LDDHDPMB_01024 8.43e-94 - - - V ko:K11085 ko02010,map02010 ko00000,ko00001,ko01000,ko02000 (ABC) transporter
LDDHDPMB_01025 7.43e-130 - - - S - - - AAA domain, putative AbiEii toxin, Type IV TA system
LDDHDPMB_01027 1.2e-116 - - - K - - - Winged helix DNA-binding domain
LDDHDPMB_01028 3.72e-105 - - - F - - - Nucleoside 2-deoxyribosyltransferase
LDDHDPMB_01029 0.0 aspA 4.3.1.1 - E ko:K01744 ko00250,ko01100,map00250,map01100 ko00000,ko00001,ko01000 Fumarase C C-terminus
LDDHDPMB_01030 6.85e-54 - - - P ko:K04758 - ko00000,ko02000 FeoA
LDDHDPMB_01031 0.0 feoB - - P ko:K04759 - ko00000,ko02000 transporter of a GTP-driven Fe(2 ) uptake system
LDDHDPMB_01032 0.0 zwf 1.1.1.363, 1.1.1.49 - G ko:K00036 ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,ko05230,map00030,map00480,map01100,map01110,map01120,map01130,map01200,map05230 ko00000,ko00001,ko00002,ko01000,ko04147 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
LDDHDPMB_01033 5.42e-232 opcA - - G - - - Glucose-6-phosphate dehydrogenase subunit
LDDHDPMB_01034 9.91e-189 pgl 3.1.1.31 - G ko:K01057 ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
LDDHDPMB_01035 0.0 gnd 1.1.1.343, 1.1.1.44 - H ko:K00033 ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
LDDHDPMB_01036 2.15e-22 M1-966 3.4.13.21 - E ko:K05995 - ko00000,ko01000,ko01002 Belongs to the peptidase S51 family
LDDHDPMB_01037 0.0 brnQ - - U ko:K03311 - ko00000 Component of the transport system for branched-chain amino acids
LDDHDPMB_01038 2.17e-247 msrA 1.8.4.11, 1.8.4.12 - O ko:K07304,ko:K12267 - ko00000,ko01000 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
LDDHDPMB_01039 0.0 - 3.6.3.4, 3.6.3.54 - P ko:K01533,ko:K17686 ko01524,ko04016,map01524,map04016 ko00000,ko00001,ko01000 E1-E2 ATPase
LDDHDPMB_01040 1.53e-189 - - - S ko:K07124 - ko00000 Belongs to the short-chain dehydrogenases reductases (SDR) family
LDDHDPMB_01041 0.0 - - - JKL - - - helicase superfamily c-terminal domain
LDDHDPMB_01042 2.85e-255 - - - S - - - Conserved hypothetical protein 698
LDDHDPMB_01043 0.0 rutG - - F ko:K02824,ko:K03458 - ko00000,ko02000 Permease family
LDDHDPMB_01044 1.66e-273 - - - I - - - Hydrolase, alpha beta domain protein
LDDHDPMB_01045 5.55e-63 - - - - - - - -
LDDHDPMB_01046 1.32e-76 - - - S - - - Cupin 2, conserved barrel domain protein
LDDHDPMB_01047 2.17e-256 ychF - - J ko:K06942 - ko00000,ko03009 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
LDDHDPMB_01048 4.3e-186 proC 1.5.1.2 - E ko:K00286 ko00330,ko01100,ko01110,ko01130,ko01230,map00330,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
LDDHDPMB_01049 0.0 pip 3.4.11.5 - S ko:K01259 ko00330,map00330 ko00000,ko00001,ko01000,ko01002 alpha/beta hydrolase fold
LDDHDPMB_01050 0.0 - - - T - - - Histidine kinase
LDDHDPMB_01051 3.72e-154 - - - K - - - helix_turn_helix, Lux Regulon
LDDHDPMB_01052 0.0 - - - MV ko:K02004 - ko00000,ko00002,ko02000 MacB-like periplasmic core domain
LDDHDPMB_01053 2.32e-219 - - - V ko:K02003 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
LDDHDPMB_01054 1.68e-136 ecfT - - P ko:K02008,ko:K16783,ko:K16785 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 transmembrane transporter activity
LDDHDPMB_01055 0.0 ykoD - - P ko:K16784,ko:K16786,ko:K16787 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 AAA domain, putative AbiEii toxin, Type IV TA system
LDDHDPMB_01057 0.0 - 2.5.1.49 - E ko:K01740 ko00270,ko01100,map00270,map01100 ko00000,ko00001,ko01000 Aminotransferase class-V
LDDHDPMB_01058 1.2e-211 pdxY 2.7.1.35 - H ko:K00868 ko00750,ko01100,map00750,map01100 ko00000,ko00001,ko01000 Phosphomethylpyrimidine kinase
LDDHDPMB_01059 1.89e-114 yraN - - L ko:K07460 - ko00000 Belongs to the UPF0102 family
LDDHDPMB_01060 0.0 comM - - O ko:K07391 - ko00000 Magnesium chelatase, subunit ChlI C-terminal
LDDHDPMB_01061 1.44e-277 dprA - - LU ko:K04096 - ko00000 DNA recombination-mediator protein A
LDDHDPMB_01062 0.0 sdhA 1.3.5.1, 1.3.5.4, 1.4.3.16 - C ko:K00239,ko:K00278 ko00020,ko00190,ko00250,ko00650,ko00720,ko00760,ko01100,ko01110,ko01120,ko01130,ko01200,ko05134,map00020,map00190,map00250,map00650,map00720,map00760,map01100,map01110,map01120,map01130,map01200,map05134 ko00000,ko00001,ko00002,ko01000 Succinate dehydrogenase flavoprotein subunit
LDDHDPMB_01063 1.36e-234 sdhB 1.3.5.1, 1.3.5.4 - C ko:K00240 ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 4Fe-4S dicluster domain
LDDHDPMB_01064 2.13e-157 safC - - S - - - O-methyltransferase
LDDHDPMB_01065 1.06e-192 fmt2 3.2.2.10 - S ko:K06966 ko00230,ko00240,map00230,map00240 ko00000,ko00001,ko01000 Belongs to the LOG family
LDDHDPMB_01066 0.0 nhaA - - P ko:K03313 - ko00000,ko02000 Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
LDDHDPMB_01067 2.54e-311 patB 4.4.1.8 - E ko:K14155 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 ko00000,ko00001,ko01000,ko01007 Aminotransferase, class I II
LDDHDPMB_01070 0.0 clpX - - O ko:K03544 ko04112,map04112 ko00000,ko00001,ko03110 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
LDDHDPMB_01071 5.41e-160 clpP 3.4.21.92 - O ko:K01358 ko04112,ko04212,map04112,map04212 ko00000,ko00001,ko01000,ko01002 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
LDDHDPMB_01072 3.08e-147 clpP1 3.4.21.92 - O ko:K01358 ko04112,ko04212,map04112,map04212 ko00000,ko00001,ko01000,ko01002 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
LDDHDPMB_01073 0.0 - - - P ko:K03281 - ko00000 Voltage gated chloride channel
LDDHDPMB_01074 6.03e-306 tig - - D ko:K03545 - ko00000 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
LDDHDPMB_01075 0.0 rnd 3.1.13.5 - J ko:K03684 - ko00000,ko01000,ko03016 3'-5' exonuclease
LDDHDPMB_01076 6.98e-224 pflA 1.97.1.4 - C ko:K04069 - ko00000,ko01000 Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
LDDHDPMB_01077 0.0 pflB 2.3.1.54 - C ko:K00656 ko00620,ko00640,ko00650,ko01100,ko01120,map00620,map00640,map00650,map01100,map01120 ko00000,ko00001,ko01000 Pyruvate formate lyase-like
LDDHDPMB_01078 2.17e-43 - - - - - - - -
LDDHDPMB_01079 0.0 nadE 6.3.5.1 - H ko:K01950 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
LDDHDPMB_01080 1.09e-288 - - - S - - - Peptidase dimerisation domain
LDDHDPMB_01081 3.75e-155 metI - - P ko:K02072 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
LDDHDPMB_01082 6.49e-304 metN - - P ko:K02071 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
LDDHDPMB_01083 2.68e-232 - - - P ko:K02073 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 NLPA lipoprotein
LDDHDPMB_01084 4.86e-134 ppiA 5.2.1.8 - G ko:K03767,ko:K03768 ko01503,ko04217,map01503,map04217 ko00000,ko00001,ko01000,ko03110,ko04147 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
LDDHDPMB_01085 0.0 relA 2.7.6.5, 3.1.7.2 - KT ko:K00951,ko:K01139 ko00230,map00230 ko00000,ko00001,ko01000,ko03009 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
LDDHDPMB_01086 4.9e-108 dut 3.6.1.23 - F ko:K01520 ko00240,ko00983,ko01100,map00240,map00983,map01100 ko00000,ko00001,ko00002,ko01000,ko03400 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA
LDDHDPMB_01087 1.42e-62 - - - S - - - Domain of unknown function (DUF4193)
LDDHDPMB_01088 3.68e-312 - - - S - - - Protein of unknown function (DUF3071)
LDDHDPMB_01089 9.9e-274 - - - S - - - Type I phosphodiesterase / nucleotide pyrophosphatase
LDDHDPMB_01090 0.0 gyrA2 5.99.1.3 - L ko:K02469 - ko00000,ko01000,ko03032,ko03400 DNA topoisomerase (ATP-hydrolyzing)
LDDHDPMB_01091 8.26e-221 - - - G ko:K05340 - ko00000,ko02000 Sugar transport protein
LDDHDPMB_01092 0.0 lhr - - L ko:K03724 - ko00000,ko01000,ko03400 DEAD DEAH box helicase
LDDHDPMB_01093 2.31e-56 - - - G - - - Major facilitator superfamily
LDDHDPMB_01095 5.36e-282 - - - G - - - Major Facilitator Superfamily
LDDHDPMB_01096 1.21e-288 - 2.4.1.345 GT4 M ko:K08256 - ko00000,ko01000,ko01003 Glycosyl transferase 4-like domain
LDDHDPMB_01097 0.0 gyrB2 5.99.1.3 - L ko:K02470 - ko00000,ko01000,ko03032,ko03400 DNA topoisomerase (ATP-hydrolyzing)
LDDHDPMB_01098 2.66e-264 sigA - - K ko:K03086 - ko00000,ko03021 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
LDDHDPMB_01099 8.16e-167 - - - - - - - -
LDDHDPMB_01100 7.37e-259 idsA 2.5.1.1, 2.5.1.10, 2.5.1.29 - H ko:K13787 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000,ko01006 Belongs to the FPP GGPP synthase family
LDDHDPMB_01101 0.0 pknL 2.7.11.1 - KLT ko:K08884,ko:K12132 - ko00000,ko01000,ko01001 PASTA
LDDHDPMB_01102 1.73e-178 plsC2 2.3.1.51 - I ko:K00655 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko01004 Phosphate acyltransferases
LDDHDPMB_01103 7.66e-127 - - - - - - - -
LDDHDPMB_01104 3.49e-247 trpD 2.4.2.18 - F ko:K00766 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
LDDHDPMB_01105 0.0 secA - - U ko:K03070 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
LDDHDPMB_01106 1.82e-160 hpf - - J ko:K05808 - ko00000,ko03009 Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
LDDHDPMB_01108 2.43e-147 recX - - S ko:K03565 - ko00000,ko03400 Modulates RecA activity
LDDHDPMB_01109 6.98e-265 recA - - L ko:K03553 ko03440,map03440 ko00000,ko00001,ko00002,ko03400 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
LDDHDPMB_01110 1.78e-58 - - - S - - - Protein of unknown function (DUF3046)
LDDHDPMB_01111 6.75e-113 - - - K - - - Helix-turn-helix XRE-family like proteins
LDDHDPMB_01112 1.92e-144 cinA 3.5.1.42 - S ko:K03743 ko00760,map00760 ko00000,ko00001,ko01000 Belongs to the CinA family
LDDHDPMB_01113 8.42e-156 pgsA 2.7.8.41, 2.7.8.5 - I ko:K00995,ko:K08744 ko00564,ko01100,map00564,map01100 ko00000,ko00001,ko01000 Belongs to the CDP-alcohol phosphatidyltransferase class-I family
LDDHDPMB_01114 0.0 ftsK - - D ko:K03466 - ko00000,ko03036 FtsK SpoIIIE family protein
LDDHDPMB_01115 4.34e-247 miaA 2.5.1.75 - F ko:K00791 ko00908,ko01100,ko01110,map00908,map01100,map01110 ko00000,ko00001,ko01000,ko01006,ko03016 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
LDDHDPMB_01116 0.0 miaB 2.8.4.3 - H ko:K06168 - ko00000,ko01000,ko03016 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
LDDHDPMB_01117 3.69e-184 ywaC 2.7.6.5 - S ko:K07816 ko00230,map00230 ko00000,ko00001,ko01000 Region found in RelA / SpoT proteins
LDDHDPMB_01119 6.82e-254 - 1.4.1.12, 1.4.1.26 - S ko:K21672 ko00310,ko00330,ko00472,map00310,map00330,map00472 ko00000,ko00001,ko01000 Dihydrodipicolinate reductase, N-terminus
LDDHDPMB_01120 3.98e-295 - - - V ko:K01992 - ko00000,ko00002,ko02000 ABC-2 family transporter protein
LDDHDPMB_01121 1.71e-301 - - - V ko:K01992 - ko00000,ko00002,ko02000 ABC-2 family transporter protein
LDDHDPMB_01122 1.62e-236 - - - V ko:K01990 - ko00000,ko00002,ko02000 ATPases associated with a variety of cellular activities
LDDHDPMB_01123 2.19e-271 - - - T - - - Histidine kinase
LDDHDPMB_01124 9.39e-149 - - - K - - - helix_turn_helix, Lux Regulon
LDDHDPMB_01125 5.27e-195 - - - S - - - Protein of unknown function DUF262
LDDHDPMB_01126 0.0 tnpA - - L - - - Transposase
LDDHDPMB_01127 0.0 - - - S - - - Protein of unknown function DUF262
LDDHDPMB_01128 3.31e-158 - 2.3.1.18, 2.3.1.79 - S ko:K00633,ko:K00661 - ko00000,ko01000 Bacterial transferase hexapeptide repeat protein
LDDHDPMB_01129 3.99e-47 - - - - - - - -
LDDHDPMB_01130 0.0 acnA 4.2.1.3 - C ko:K01681 ko00020,ko00630,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230 br01601,ko00000,ko00001,ko00002,ko01000 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
LDDHDPMB_01131 0.0 ctpE - - P ko:K12952 - ko00000,ko01000 E1-E2 ATPase
LDDHDPMB_01132 3.81e-133 - - - - - - - -
LDDHDPMB_01133 0.0 rumA 2.1.1.190 - J ko:K03215 - ko00000,ko01000,ko03009 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
LDDHDPMB_01134 2.68e-176 - - - S - - - Protein of unknown function (DUF3159)
LDDHDPMB_01135 5.41e-204 - - - S - - - Protein of unknown function (DUF3710)
LDDHDPMB_01136 4.59e-217 xth 3.1.11.2 - L ko:K01142 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 Endonuclease/Exonuclease/phosphatase family
LDDHDPMB_01137 2.11e-153 - - - - - - - -
LDDHDPMB_01138 0.0 dppD - - P ko:K02031,ko:K02032 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 Belongs to the ABC transporter superfamily
LDDHDPMB_01139 9.25e-220 dppC - - EP ko:K02034,ko:K15582 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 N-terminal TM domain of oligopeptide transport permease C
LDDHDPMB_01140 1.48e-199 dppB - - EP ko:K02033,ko:K15581 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
LDDHDPMB_01141 0.0 dppA - - E ko:K02035,ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter, substrate-binding protein, family 5
LDDHDPMB_01142 1.44e-228 xerC - - D ko:K03733,ko:K04763 - ko00000,ko03036 Belongs to the 'phage' integrase family. XerC subfamily
LDDHDPMB_01143 4.76e-190 - - - V ko:K02003 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
LDDHDPMB_01144 0.0 - - - MV ko:K02004 - ko00000,ko00002,ko02000 MacB-like periplasmic core domain
LDDHDPMB_01145 3.14e-54 - - - - - - - -
LDDHDPMB_01146 7.85e-270 tyrA 1.3.1.12 - E ko:K00210,ko:K04517 ko00400,ko00401,ko01100,ko01110,ko01130,ko01230,map00400,map00401,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Prephenate dehydrogenase
LDDHDPMB_01147 6.3e-277 pheA 4.2.1.51, 5.4.99.5 - E ko:K04518,ko:K14170 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Prephenate dehydratase
LDDHDPMB_01148 4.3e-142 - - - - - - - -
LDDHDPMB_01149 0.0 typA - - T ko:K06207 - ko00000 Elongation factor G C-terminus
LDDHDPMB_01150 0.0 nanT - - U ko:K03290,ko:K08178,ko:K08369 - ko00000,ko02000 Sugar (and other) transporter
LDDHDPMB_01151 1.01e-200 - 3.6.1.55 - F ko:K03574 - ko00000,ko01000,ko03400 NUDIX hydrolase
LDDHDPMB_01152 1.55e-194 soj - - D ko:K03496 - ko00000,ko03036,ko04812 CobQ CobB MinD ParA nucleotide binding domain protein
LDDHDPMB_01153 9.9e-214 xerD - - D ko:K03733,ko:K04763 - ko00000,ko03036 recombinase XerD
LDDHDPMB_01154 1.63e-82 rplT - - J ko:K02887 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
LDDHDPMB_01155 1.79e-34 rpmI - - J ko:K02916 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal protein L35
LDDHDPMB_01156 2.25e-136 infC - - J ko:K02520 - ko00000,ko03012,ko03029 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
LDDHDPMB_01157 1.68e-193 - 2.7.6.2 - H ko:K00949 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko01000 Thiamin pyrophosphokinase, vitamin B1 binding domain
LDDHDPMB_01158 1.3e-264 gap 1.2.1.12 - G ko:K00134 ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
LDDHDPMB_01159 3.2e-116 ybaK - - J ko:K03976 - ko00000,ko01000,ko03016 Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
LDDHDPMB_01160 4.77e-229 ispH 1.17.7.4 - IM ko:K03527 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
LDDHDPMB_01161 3.12e-253 - 5.1.3.3 - G ko:K01785 ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130 ko00000,ko00001,ko00002,ko01000 Aldose 1-epimerase
LDDHDPMB_01162 1.32e-72 - - - - - - - -
LDDHDPMB_01163 2.85e-169 sigH - - K ko:K03088 - ko00000,ko03021 Belongs to the sigma-70 factor family. ECF subfamily
LDDHDPMB_01164 0.0 murE 6.3.2.13 - M ko:K01928 ko00300,ko00550,map00300,map00550 ko00000,ko00001,ko01000,ko01011 Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
LDDHDPMB_01165 2e-255 - - - V - - - Acetyltransferase (GNAT) domain
LDDHDPMB_01166 0.0 folC 6.3.2.12, 6.3.2.17 - H ko:K11754 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko00002,ko01000 Mur ligase middle domain
LDDHDPMB_01167 5.94e-149 - - - KT - - - cheY-homologous receiver domain
LDDHDPMB_01168 2.34e-248 - - - T - - - Histidine kinase
LDDHDPMB_01169 3.55e-192 - - - - - - - -
LDDHDPMB_01170 0.0 pepP 3.4.11.9 - E ko:K01262 - ko00000,ko01000,ko01002 Aminopeptidase P, N-terminal domain
LDDHDPMB_01171 6.13e-127 - - - F - - - NUDIX domain
LDDHDPMB_01172 1.51e-284 - 2.7.1.2 - GK ko:K00845 ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 ROK family
LDDHDPMB_01173 2.02e-217 - 2.7.1.4 - G ko:K00847 ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100 ko00000,ko00001,ko01000 pfkB family carbohydrate kinase
LDDHDPMB_01174 6.33e-109 dtd - - J ko:K07560 - ko00000,ko01000,ko03016 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
LDDHDPMB_01175 3.23e-271 int8 - - L - - - Phage integrase family
LDDHDPMB_01177 0.00013 - - - L - - - Helix-turn-helix domain
LDDHDPMB_01181 3.06e-39 - - - - - - - -
LDDHDPMB_01182 4.49e-291 - - - T - - - AAA domain
LDDHDPMB_01187 0.0 - - - S ko:K06904 - ko00000 Caudovirus prohead serine protease
LDDHDPMB_01190 0.0 - - - P ko:K02031,ko:K02032 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 Belongs to the ABC transporter superfamily
LDDHDPMB_01191 3.5e-272 dppC - - EP ko:K02034 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
LDDHDPMB_01192 1.98e-243 dppB - - EP ko:K02033 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
LDDHDPMB_01193 5.75e-76 - - - E ko:K02035 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 Bacterial extracellular solute-binding proteins, family 5 Middle
LDDHDPMB_01194 3.14e-200 - - - E ko:K02035 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 Bacterial extracellular solute-binding proteins, family 5 Middle
LDDHDPMB_01195 2.95e-301 ftsQ - - D ko:K03589 ko04112,map04112 ko00000,ko00001,ko03036 Cell division protein FtsQ
LDDHDPMB_01196 0.0 murC 6.3.2.8 - M ko:K01924 ko00471,ko00550,ko01100,map00471,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Belongs to the MurCDEF family
LDDHDPMB_01197 2.95e-206 murG 2.4.1.227, 6.3.2.8 GT28 M ko:K01924,ko:K02563 ko00471,ko00550,ko01100,ko01502,ko04112,map00471,map00550,map01100,map01502,map04112 ko00000,ko00001,ko01000,ko01011 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
LDDHDPMB_01198 0.0 ftsW 2.4.1.227 GT28 D ko:K02563,ko:K03588 ko00550,ko01100,ko01502,ko04112,map00550,map01100,map01502,map04112 ko00000,ko00001,ko01000,ko01011,ko02000,ko03036 Belongs to the SEDS family
LDDHDPMB_01199 0.0 murD 6.3.2.9 - M ko:K01925 ko00471,ko00550,ko01100,map00471,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
LDDHDPMB_01200 1.21e-267 mraY 2.7.8.13 - M ko:K01000 ko00550,ko01100,ko01502,map00550,map01100,map01502 ko00000,ko00001,ko01000,ko01011 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
LDDHDPMB_01201 0.0 murF 6.3.2.10 - M ko:K01929 ko00300,ko00550,ko01100,ko01502,map00300,map00550,map01100,map01502 ko00000,ko00001,ko01000,ko01011 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
LDDHDPMB_01202 9.34e-204 - - - M - - - Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
LDDHDPMB_01203 0.0 ftsI 3.4.16.4 - M ko:K03587 ko00550,ko01501,map00550,map01501 ko00000,ko00001,ko01000,ko01011,ko03036 Penicillin-binding protein, transpeptidase domain protein
LDDHDPMB_01204 3.19e-119 - - - D - - - Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
LDDHDPMB_01205 2.11e-249 rsmH 2.1.1.199 - J ko:K03438 - ko00000,ko01000,ko03009 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
LDDHDPMB_01206 5.36e-111 mraZ - - K ko:K03925 - ko00000 Belongs to the MraZ family
LDDHDPMB_01207 0.0 - - - L - - - DNA helicase
LDDHDPMB_01208 1.59e-289 serA 1.1.1.399, 1.1.1.95 - EH ko:K00058 ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko04147 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
LDDHDPMB_01209 1.85e-125 nrdR - - K ko:K07738 - ko00000,ko03000 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
LDDHDPMB_01210 3.77e-14 - - - M - - - LysM domain
LDDHDPMB_01211 1.06e-165 lexA 3.4.21.88 - K ko:K01356 - ko00000,ko00002,ko01000,ko01002,ko03400 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
LDDHDPMB_01212 2.23e-212 czcD - - P ko:K16264 - ko00000,ko02000 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
LDDHDPMB_01213 3.25e-225 ldh 1.1.1.27, 1.1.1.37 - C ko:K00016,ko:K00024 ko00010,ko00020,ko00270,ko00620,ko00630,ko00640,ko00680,ko00710,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko04922,map00010,map00020,map00270,map00620,map00630,map00640,map00680,map00710,map00720,map01100,map01110,map01120,map01130,map01200,map04922 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the LDH MDH superfamily. LDH family
LDDHDPMB_01214 0.0 hflX - - S ko:K03665 - ko00000,ko03009 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
LDDHDPMB_01215 1.27e-150 rsmC 2.1.1.172 - J ko:K00564 - ko00000,ko01000,ko03009 Ribosomal protein L11 methyltransferase (PrmA)
LDDHDPMB_01216 0.0 hrpA 3.6.4.13 - L ko:K03578 - ko00000,ko01000 Helicase associated domain (HA2) Add an annotation
LDDHDPMB_01217 0.0 glnA2 6.3.1.2 - E ko:K01915 ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727 ko00000,ko00001,ko01000,ko04147 glutamine synthetase
LDDHDPMB_01218 1.28e-230 - - - S - - - Uncharacterized protein conserved in bacteria (DUF2252)
LDDHDPMB_01219 3.66e-167 hisA 5.3.1.16, 5.3.1.24 - E ko:K01814,ko:K01817 ko00340,ko00400,ko01100,ko01110,ko01130,ko01230,map00340,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Histidine biosynthesis protein
LDDHDPMB_01220 2.09e-155 hisH - - E ko:K02501 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
LDDHDPMB_01221 4.58e-167 - - - - - - - -
LDDHDPMB_01222 2.09e-143 hisB 3.1.3.15, 4.2.1.19 - E ko:K01089,ko:K01693 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Imidazoleglycerol-phosphate dehydratase
LDDHDPMB_01223 2.17e-287 hisC 2.6.1.9 - E ko:K00817 ko00340,ko00350,ko00360,ko00400,ko00401,ko00960,ko01100,ko01110,ko01130,ko01230,map00340,map00350,map00360,map00400,map00401,map00960,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
LDDHDPMB_01224 0.0 hisD 1.1.1.23 - E ko:K00013 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
LDDHDPMB_01225 0.0 dnaE 2.7.7.7 - L ko:K02337 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase III alpha subunit
LDDHDPMB_01227 5.2e-225 rluD 5.4.99.23 - J ko:K06180 - ko00000,ko01000,ko03009 Responsible for synthesis of pseudouridine from uracil
LDDHDPMB_01228 1.34e-127 lspA 3.4.23.36 - MU ko:K03101 ko03060,map03060 ko00000,ko00001,ko01000,ko01002 This protein specifically catalyzes the removal of signal peptides from prolipoproteins
LDDHDPMB_01229 7.28e-149 - - - V - - - DivIVA protein
LDDHDPMB_01230 1.18e-56 - - - S ko:K02221 - ko00000,ko02044 YGGT family
LDDHDPMB_01231 2.22e-103 sepF - - D ko:K09772 - ko00000,ko03036 Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
LDDHDPMB_01232 7.23e-283 ftsZ - - D ko:K03531 ko04112,map04112 ko00000,ko00001,ko02048,ko03036,ko04812 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
LDDHDPMB_01233 3.31e-316 dus - - J - - - Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
LDDHDPMB_01234 0.0 glyQS 6.1.1.14 - J ko:K01880 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Catalyzes the attachment of glycine to tRNA(Gly)
LDDHDPMB_01235 7.5e-125 thiM 2.7.1.50 - H ko:K00878 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
LDDHDPMB_01236 0.0 thiE 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 - H ko:K03147,ko:K14153 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko00002,ko01000 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)
LDDHDPMB_01237 7.04e-79 - - - S - - - Thiamine-binding protein
LDDHDPMB_01238 3.28e-257 - - - K ko:K02529 - ko00000,ko03000 helix_turn _helix lactose operon repressor
LDDHDPMB_01239 9.04e-316 lacY - - P ko:K02532 - ko00000,ko02000 LacY proton/sugar symporter
LDDHDPMB_01240 0.0 fosC 3.2.1.26 GH32 G ko:K01193 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 32 family
LDDHDPMB_01241 7.44e-190 - - - P - - - Binding-protein-dependent transport system inner membrane component
LDDHDPMB_01242 1.86e-233 - - - P - - - NMT1/THI5 like
LDDHDPMB_01243 1.82e-297 - - - F - - - nucleoside hydrolase
LDDHDPMB_01245 5.72e-195 uppS 2.5.1.31, 2.5.1.86, 2.5.1.88 - H ko:K00806,ko:K14215,ko:K21273 ko00900,ko01110,map00900,map01110 ko00000,ko00001,ko01000,ko01006 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
LDDHDPMB_01246 3.68e-170 recO - - L ko:K03584 ko03440,map03440 ko00000,ko00001,ko03400 Involved in DNA repair and RecF pathway recombination
LDDHDPMB_01247 0.0 - - - I - - - acetylesterase activity
LDDHDPMB_01248 1.48e-291 ispG 1.17.7.1, 1.17.7.3 - I ko:K03526 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
LDDHDPMB_01249 5.92e-280 dxr 1.1.1.267 - I ko:K00099 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP)
LDDHDPMB_01250 0.0 - - - NU - - - Tfp pilus assembly protein FimV
LDDHDPMB_01252 1.94e-105 - - - - - - - -
LDDHDPMB_01253 2.42e-96 - - - S - - - Protein of unknown function (DUF3052)
LDDHDPMB_01254 9.43e-233 sdrC - - T ko:K07177 ko02024,map02024 ko00000,ko00001,ko01002 Belongs to the peptidase S16 family
LDDHDPMB_01255 0.0 - - - S - - - Zincin-like metallopeptidase
LDDHDPMB_01256 0.0 uvrD2 3.6.4.12 - L ko:K03657 ko03420,ko03430,map03420,map03430 ko00000,ko00001,ko01000,ko03400 DNA helicase
LDDHDPMB_01257 0.0 mphA - - S - - - Aminoglycoside phosphotransferase
LDDHDPMB_01258 1.45e-27 - - - S - - - Protein of unknown function (DUF3107)
LDDHDPMB_01259 1.14e-213 PPA1328 3.1.3.97, 3.1.4.57 - S ko:K07053,ko:K20859 ko00440,map00440 ko00000,ko00001,ko01000 DNA polymerase alpha chain like domain
LDDHDPMB_01260 3.37e-156 - - - S - - - Vitamin K epoxide reductase
LDDHDPMB_01261 7.78e-223 dapF 5.1.1.7 - E ko:K01778 ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine
LDDHDPMB_01262 3.84e-186 murI 5.1.1.3 - M ko:K01776 ko00471,ko01100,map00471,map01100 ko00000,ko00001,ko01000,ko01011 Provides the (R)-glutamate required for cell wall biosynthesis
LDDHDPMB_01263 1.21e-207 - - - S - - - Patatin-like phospholipase
LDDHDPMB_01264 7.34e-197 hflK - - O - - - prohibitin homologues
LDDHDPMB_01265 9.92e-211 glnH - - ET ko:K02030,ko:K10039 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Bacterial periplasmic substrate-binding proteins
LDDHDPMB_01266 2.41e-204 glnQ 3.6.3.21 - E ko:K02028 - ko00000,ko00002,ko01000,ko02000 ATP binding protein of ABC transporter for glutamate aspartate K02028
LDDHDPMB_01267 3.77e-157 glnP - - E ko:K02029,ko:K10040 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
LDDHDPMB_01268 1.29e-145 glnP2 - - E ko:K02029 - ko00000,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
LDDHDPMB_01269 2.49e-295 - 2.6.1.1, 2.6.1.2, 2.6.1.66, 2.6.1.83 - E ko:K00812,ko:K08969,ko:K10206,ko:K10907,ko:K14260,ko:K14261 ko00220,ko00250,ko00270,ko00290,ko00300,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00290,map00300,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Aminotransferase class I and II
LDDHDPMB_01270 3.64e-142 - - - P ko:K02072 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Psort location CytoplasmicMembrane, score 9.99
LDDHDPMB_01271 3e-280 metN - - P ko:K02071 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
LDDHDPMB_01272 8.77e-208 metQ - - M ko:K02073 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 NLPA lipoprotein
LDDHDPMB_01273 1.42e-244 - 1.1.1.169 - H ko:K00077 ko00770,ko01100,ko01110,map00770,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
LDDHDPMB_01274 1.07e-165 - - - K - - - acetyltransferase
LDDHDPMB_01275 5.15e-134 - 2.7.7.7 - L ko:K02342 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 Exonuclease, DNA polymerase III, epsilon subunit family
LDDHDPMB_01276 8.79e-10 - - - - - - - -
LDDHDPMB_01279 0.0 tetM - - J ko:K18220 - br01600,ko00000,ko01504 Elongation factor G, domain IV
LDDHDPMB_01280 0.0 lysI - - E ko:K03758 - ko00000,ko02000 Amino acid permease
LDDHDPMB_01281 1.13e-150 - - - - - - - -
LDDHDPMB_01282 3.18e-41 - - - - - - - -
LDDHDPMB_01283 0.0 dppA - - E ko:K02035,ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter, substrate-binding protein, family 5
LDDHDPMB_01284 0.0 - - - EGP ko:K18926 - ko00000,ko00002,ko02000 Major Facilitator Superfamily
LDDHDPMB_01285 3.33e-149 pspA - - KT ko:K03969 - ko00000 PspA/IM30 family
LDDHDPMB_01286 8.06e-315 - - - S - - - COG1512 Beta-propeller domains of methanol dehydrogenase type
LDDHDPMB_01287 2.01e-08 - - - L - - - This gene contains a nucleotide ambiguity which may be the result of a sequencing error
LDDHDPMB_01288 0.0 ileS 6.1.1.5 - J ko:K01870 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
LDDHDPMB_01289 3.48e-33 - - - - - - - -
LDDHDPMB_01290 1.7e-188 - 3.1.3.48 - T ko:K01104 - ko00000,ko01000 Tyrosine phosphatase family
LDDHDPMB_01291 5.39e-62 - - - - - - - -
LDDHDPMB_01292 2.3e-22 - - - - - - - -
LDDHDPMB_01293 0.0 - - - V ko:K06147 - ko00000,ko02000 ABC transporter transmembrane region
LDDHDPMB_01294 0.0 - - - V ko:K06147 - ko00000,ko02000 ABC transporter, ATP-binding protein
LDDHDPMB_01295 6.41e-127 - - - K - - - MarR family
LDDHDPMB_01296 2.28e-132 - - - S - - - NADPH-dependent FMN reductase
LDDHDPMB_01297 1.31e-129 vsr - - L ko:K07458 - ko00000,ko01000,ko03400 May nick specific sequences that contain T G mispairs resulting from m5C-deamination
LDDHDPMB_01300 6.34e-66 - - - - - - - -
LDDHDPMB_01301 4.02e-265 - - - - ko:K19133 - ko00000,ko02048 -
LDDHDPMB_01302 0.0 cas3 - - L ko:K07012 - ko00000,ko01000,ko02048 CRISPR-associated helicase Cas3
LDDHDPMB_01303 0.0 - - - - ko:K19132 - ko00000,ko02048 -
LDDHDPMB_01304 5.26e-284 - - - S ko:K19131 - ko00000,ko02048 CRISPR-associated protein GSU0053 (Cas_GSU0053)
LDDHDPMB_01305 7.49e-24 cas2 - - L ko:K09951 - ko00000,ko02048 CRISPR associated protein Cas2
LDDHDPMB_01306 0.0 cas1 - - L ko:K15342 - ko00000,ko02048,ko03400 CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
LDDHDPMB_01307 0.0 egtA 6.3.2.2 - H ko:K01919 ko00270,ko00480,ko01100,map00270,map00480,map01100 ko00000,ko00001,ko00002,ko01000 Glutamate-cysteine ligase family 2(GCS2)
LDDHDPMB_01308 0.0 hgdC - - I - - - CoA enzyme activase uncharacterised domain (DUF2229)
LDDHDPMB_01309 8.85e-131 - - - S - - - Protein of unknown function (DUF1211)
LDDHDPMB_01310 5.83e-78 - - - S ko:K08987 - ko00000 Protein of unknown function (DUF1304)
LDDHDPMB_01311 3.76e-183 - - - - - - - -
LDDHDPMB_01312 2.07e-190 nrdG 1.97.1.4 - O ko:K04068 - ko00000,ko01000 Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
LDDHDPMB_01313 0.0 nrdD 1.1.98.6 - F ko:K21636 ko00230,ko00240,ko01100,map00230,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Anaerobic ribonucleoside-triphosphate reductase
LDDHDPMB_01314 1.04e-305 xseA 3.1.11.6 - L ko:K03601 ko03430,map03430 ko00000,ko00001,ko01000,ko03400 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
LDDHDPMB_01315 4.21e-60 xseB 3.1.11.6 - L ko:K03602 ko03430,map03430 ko00000,ko00001,ko01000,ko03400 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
LDDHDPMB_01316 7.29e-244 - - - S ko:K18353 ko01502,ko02020,map01502,map02020 ko00000,ko00001,ko00002,ko01504 Endonuclease/Exonuclease/phosphatase family
LDDHDPMB_01318 5.11e-165 tmp1 - - S - - - Domain of unknown function (DUF4391)
LDDHDPMB_01319 2.09e-217 aspB 2.6.1.1, 2.6.1.2, 2.6.1.66 - E ko:K00812,ko:K08969,ko:K10907,ko:K14260 ko00220,ko00250,ko00270,ko00290,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00290,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Aminotransferase class-V
LDDHDPMB_01320 1.34e-130 vsr - - L ko:K07458 - ko00000,ko01000,ko03400 May nick specific sequences that contain T G mispairs resulting from m5C-deamination
LDDHDPMB_01321 0.0 - - - S - - - zinc finger
LDDHDPMB_01322 0.0 - - - L - - - Psort location Cytoplasmic, score
LDDHDPMB_01323 1.64e-162 def 3.5.1.88 - J ko:K01462 - ko00000,ko01000 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
LDDHDPMB_01324 0.0 glmM 5.4.2.10 - G ko:K03431 ko00520,ko01100,ko01130,map00520,map01100,map01130 ko00000,ko00001,ko01000 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
LDDHDPMB_01325 0.0 pepN 3.4.11.2 - E ko:K01256,ko:K08776 ko00480,ko01100,map00480,map01100 ko00000,ko00001,ko01000,ko01002 Peptidase family M1 domain
LDDHDPMB_01326 0.0 rnj - - J ko:K12574 ko03018,map03018 ko00000,ko00001,ko01000,ko03019 An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
LDDHDPMB_01327 3.72e-212 dapA 4.3.3.7 - E ko:K01714 ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
LDDHDPMB_01328 7.91e-173 dapB 1.17.1.8 - E ko:K00215 ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
LDDHDPMB_01329 0.0 - - - G - - - Major Facilitator Superfamily
LDDHDPMB_01330 2.04e-171 - - - K - - - -acetyltransferase
LDDHDPMB_01331 0.0 uvrD2 3.6.4.12 - L ko:K03657 ko03420,ko03430,map03420,map03430 ko00000,ko00001,ko01000,ko03400 Belongs to the helicase family. UvrD subfamily
LDDHDPMB_01332 0.0 - - - L - - - PD-(D/E)XK nuclease superfamily
LDDHDPMB_01333 0.0 pknK 2.7.11.1 - KLT ko:K12132 - ko00000,ko01000,ko01001 Protein tyrosine kinase
LDDHDPMB_01334 0.0 - - - S - - - Fibronectin type 3 domain
LDDHDPMB_01335 9.88e-163 - - - S ko:K03924 - ko00000,ko01000 ATPase family associated with various cellular activities (AAA)
LDDHDPMB_01336 3.4e-266 - - - S - - - Protein of unknown function DUF58
LDDHDPMB_01337 0.0 - - - E - - - Transglutaminase-like superfamily
LDDHDPMB_01338 5.62e-135 - - - B - - - Belongs to the OprB family
LDDHDPMB_01339 1.49e-138 - - - T - - - Forkhead associated domain
LDDHDPMB_01340 0.0 rpoC 2.7.7.6 - K ko:K03046 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
LDDHDPMB_01341 0.0 rpoB 2.7.7.6 - K ko:K03043 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
LDDHDPMB_01342 2.17e-68 - - - - - - - -
LDDHDPMB_01343 5.51e-239 mutY - - L ko:K03575 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 FES
LDDHDPMB_01344 3.3e-165 spoU 2.1.1.207 - J ko:K03216 - ko00000,ko01000,ko03016 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
LDDHDPMB_01345 0.0 - - - S ko:K09157 - ko00000 UPF0210 protein
LDDHDPMB_01346 1.69e-57 - - - T ko:K07166 - ko00000 Belongs to the UPF0237 family
LDDHDPMB_01347 1.45e-192 - 3.4.22.70 - M ko:K07284 - ko00000,ko01000,ko01002,ko01011 Sortase family
LDDHDPMB_01349 3.52e-295 galK 2.7.1.6, 2.7.7.12 - G ko:K00849,ko:K00965 ko00052,ko00520,ko01100,ko04917,map00052,map00520,map01100,map04917 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the GHMP kinase family. GalK subfamily
LDDHDPMB_01350 0.0 galT 2.7.7.12 - C ko:K00965 ko00052,ko00520,ko01100,ko04917,map00052,map00520,map01100,map04917 ko00000,ko00001,ko00002,ko01000 Galactose-1-phosphate uridyl transferase, N-terminal domain
LDDHDPMB_01351 5.19e-184 - - - K - - - DeoR C terminal sensor domain
LDDHDPMB_01352 9.89e-143 ppm1 2.4.1.83 GT2 S ko:K00721 ko00510,ko01100,map00510,map01100 ko00000,ko00001,ko01000,ko01003 Glycosyl transferase family 2
LDDHDPMB_01353 2.16e-282 pyrD 1.3.5.2, 1.3.98.1 - F ko:K00226,ko:K00254 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor
LDDHDPMB_01354 2.6e-282 namA - - C - - - NADH:flavin oxidoreductase / NADH oxidase family
LDDHDPMB_01355 0.0 pon1 - - M - - - Transglycosylase
LDDHDPMB_01356 1.64e-178 crp - - K ko:K10914 ko02020,ko02024,ko02025,ko02026,ko05111,map02020,map02024,map02025,map02026,map05111 ko00000,ko00001,ko03000 helix_turn_helix, cAMP Regulatory protein
LDDHDPMB_01357 5.28e-283 lplA 6.3.1.20 - H ko:K03800 ko00785,ko01100,map00785,map01100 ko00000,ko00001,ko01000 Biotin/lipoate A/B protein ligase family
LDDHDPMB_01358 5.69e-105 - - - J - - - TM2 domain
LDDHDPMB_01359 1.84e-28 - - - - - - - -
LDDHDPMB_01360 1.06e-220 leuB 1.1.1.85 - CE ko:K00052 ko00290,ko00660,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map01100,map01110,map01210,map01230 br01601,ko00000,ko00001,ko00002,ko01000 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate
LDDHDPMB_01361 0.0 ptrB 3.4.21.83 - E ko:K01354 ko05142,ko05143,map05142,map05143 ko00000,ko00001,ko01000,ko01002 Peptidase, S9A B C family, catalytic domain protein
LDDHDPMB_01362 0.0 - - - S - - - Uncharacterized conserved protein (DUF2183)
LDDHDPMB_01363 5.74e-94 gcvH - - E ko:K02437 ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200 ko00000,ko00001,ko00002 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein
LDDHDPMB_01364 2.11e-273 nudC 3.6.1.22 - L ko:K03426 ko00760,ko01100,ko04146,map00760,map01100,map04146 ko00000,ko00001,ko01000 NADH pyrophosphatase zinc ribbon domain
LDDHDPMB_01365 3.34e-220 - - - I - - - Alpha/beta hydrolase family
LDDHDPMB_01366 1.17e-109 - - - F - - - Domain of unknown function (DUF4916)
LDDHDPMB_01367 1.18e-86 trxA 1.8.1.9 - O ko:K00384,ko:K03671 ko00450,ko04621,ko05418,map00450,map04621,map05418 ko00000,ko00001,ko01000,ko03110 Belongs to the thioredoxin family
LDDHDPMB_01368 3.66e-241 - - - S ko:K21688 - ko00000 G5
LDDHDPMB_01369 0.0 - - - M - - - Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
LDDHDPMB_01370 1.57e-100 - - - - - - - -
LDDHDPMB_01371 0.0 - - - S - - - Predicted membrane protein (DUF2142)
LDDHDPMB_01372 3.45e-239 - - - M - - - Glycosyl transferase family 2
LDDHDPMB_01373 0.0 - - - S - - - Protein of unknown function (DUF4012)
LDDHDPMB_01374 8.58e-218 rfbA 2.7.7.24 - H ko:K00973 ko00521,ko00523,ko00525,ko01130,map00521,map00523,map00525,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
LDDHDPMB_01375 0.0 rfbD 1.1.1.133, 5.1.3.13 - M ko:K00067,ko:K01790 ko00521,ko00523,ko01130,map00521,map00523,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
LDDHDPMB_01376 1.28e-263 rfbB 4.2.1.46 - M ko:K01710 ko00521,ko00523,ko00525,ko01055,ko01130,map00521,map00523,map00525,map01055,map01130 ko00000,ko00001,ko00002,ko01000 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
LDDHDPMB_01377 4.52e-237 - - - M - - - Glycosyl transferase family 2
LDDHDPMB_01378 0.0 - - - S - - - Psort location CytoplasmicMembrane, score 9.99
LDDHDPMB_01379 6.8e-219 - - - S - - - Glycosyl transferase family 2
LDDHDPMB_01380 4.03e-245 - 2.7.8.12 GT2 S ko:K09809,ko:K19427 - ko00000,ko01000 Glycosyltransferase like family 2
LDDHDPMB_01381 0.0 - - - - - - - -
LDDHDPMB_01382 6.81e-220 - - GT2 S ko:K12990 ko02024,ko02025,map02024,map02025 ko00000,ko00001,ko01000,ko01003,ko01005 Glycosyl transferase family 2
LDDHDPMB_01383 9.26e-187 - - - M - - - Domain of unknown function (DUF4422)
LDDHDPMB_01384 1.34e-210 - - GT2 S ko:K12992 ko02025,map02025 ko00000,ko00001,ko01000,ko01003,ko01005 Glycosyltransferase like family 2
LDDHDPMB_01385 3.61e-234 - - - M - - - Capsular polysaccharide synthesis protein
LDDHDPMB_01386 5.09e-302 ugd 1.1.1.22 - M ko:K00012 ko00040,ko00053,ko00520,ko01100,map00040,map00053,map00520,map01100 ko00000,ko00001,ko00002,ko01000 UDP binding domain
LDDHDPMB_01387 0.0 - - - S - - - Psort location CytoplasmicMembrane, score 9.99
LDDHDPMB_01388 1.53e-252 - - - M - - - transferase activity, transferring glycosyl groups
LDDHDPMB_01389 4.92e-208 - - - S - - - Glycosyl transferase family 2
LDDHDPMB_01390 0.0 - - - M - - - Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
LDDHDPMB_01391 2.01e-65 - - - - - - - -
LDDHDPMB_01392 0.0 - - - U - - - Drug resistance MFS transporter, drug H antiporter-2 family
LDDHDPMB_01393 6.59e-310 mntH - - P ko:K03322 - ko00000,ko02000 H( )-stimulated, divalent metal cation uptake system
LDDHDPMB_01394 1.3e-174 - - - L - - - Protein of unknown function (DUF1524)
LDDHDPMB_01395 2.31e-199 pdxS 4.3.3.6 - H ko:K06215 ko00750,map00750 ko00000,ko00001,ko01000 Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
LDDHDPMB_01396 2.15e-153 pdxT 4.3.3.6 - H ko:K08681 ko00750,map00750 ko00000,ko00001,ko01000 Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
LDDHDPMB_01397 2.14e-282 - - - M - - - epimerase dehydratase
LDDHDPMB_01398 6.41e-111 - - - M - - - Oligosaccharide biosynthesis protein Alg14 like
LDDHDPMB_01399 1.84e-119 - - - M - - - Glycosyltransferase family 28 C-terminal domain
LDDHDPMB_01400 6.67e-237 - - - S - - - Glycosyl transferase family 2
LDDHDPMB_01401 5.53e-205 - - GT2 S ko:K12990 ko02024,ko02025,map02024,map02025 ko00000,ko00001,ko01000,ko01003,ko01005 Glycosyl transferase family 2
LDDHDPMB_01402 8.76e-261 - - - S - - - EpsG family
LDDHDPMB_01403 0.0 - - - V ko:K06147,ko:K06148,ko:K16013 ko02010,map02010 ko00000,ko00001,ko02000 ABC transporter transmembrane region
LDDHDPMB_01404 0.0 fadD 6.2.1.3 - I ko:K01897 ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920 ko00000,ko00001,ko00002,ko01000,ko01004,ko04147 long-chain-fatty acid CoA ligase
LDDHDPMB_01405 0.0 maf - - DF ko:K06287 - ko00000 Maf-like protein
LDDHDPMB_01406 1.13e-132 etp 3.1.3.48 - T ko:K01104 - ko00000,ko01000 Low molecular weight phosphatase family
LDDHDPMB_01407 0.0 - - - S - - - Protein of unknown function (DUF4012)
LDDHDPMB_01408 0.0 wcoI - - DM - - - Psort location CytoplasmicMembrane, score
LDDHDPMB_01409 6.14e-110 - - - - - - - -
LDDHDPMB_01410 0.0 tnpA - - L - - - Transposase
LDDHDPMB_01411 6.14e-24 cas3 - - L ko:K07012 - ko00000,ko01000,ko02048 DEAD-like helicases superfamily
LDDHDPMB_01412 4.17e-236 thrB 2.7.1.39 - E ko:K00872 ko00260,ko01100,ko01110,ko01120,ko01230,map00260,map01100,map01110,map01120,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
LDDHDPMB_01413 1.26e-311 hom 1.1.1.3, 2.7.2.4 - E ko:K00003,ko:K12524 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Homoserine dehydrogenase
LDDHDPMB_01414 0.0 lysA 4.1.1.20 - E ko:K01586 ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
LDDHDPMB_01415 0.0 argS 6.1.1.19 - J ko:K01887 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Arginyl-tRNA synthetase
LDDHDPMB_01416 0.0 - 3.2.1.45 GH30 G ko:K01201 ko00511,ko00600,ko01100,ko04142,map00511,map00600,map01100,map04142 ko00000,ko00001,ko01000 Glycosyl hydrolase family 30 TIM-barrel domain
LDDHDPMB_01417 1.23e-86 psp1 3.5.99.10 - J ko:K09022 - ko00000,ko01000 Endoribonuclease L-PSP
LDDHDPMB_01418 9.46e-144 - - - P ko:K02026,ko:K10242 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
LDDHDPMB_01419 2.42e-235 - 2.4.1.20 GT36 G ko:K00702 ko00500,ko01100,map00500,map01100 ko00000,ko00001,ko01000 Glycosyl hydrolase 36 superfamily, catalytic domain
LDDHDPMB_01421 1.96e-219 ybbN - - O ko:K05838 - ko00000,ko03110 Tetratricopeptide repeat
LDDHDPMB_01422 6.91e-235 - - - - - - - -
LDDHDPMB_01423 9.9e-276 - - - - - - - -
LDDHDPMB_01424 2.58e-223 - 5.2.1.8 - M ko:K01802 - ko00000,ko01000 FKBP-type peptidyl-prolyl cis-trans isomerase
LDDHDPMB_01425 4.85e-180 nucS - - L ko:K07503 - ko00000,ko01000 Cleaves both 3' and 5' ssDNA extremities of branched DNA structures
LDDHDPMB_01426 1.28e-65 atpC - - C ko:K02114 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 Produces ATP from ADP in the presence of a proton gradient across the membrane
LDDHDPMB_01427 0.0 atpD 3.6.3.14 - C ko:K02112 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194,ko01000 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
LDDHDPMB_01428 1.72e-213 atpG - - C ko:K02115 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
LDDHDPMB_01429 0.0 atpA 3.6.3.14 - C ko:K02111 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194,ko01000 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
LDDHDPMB_01430 7.19e-196 atpH - - C ko:K02109,ko:K02113 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
LDDHDPMB_01431 2.71e-95 atpF - - C ko:K02109 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
LDDHDPMB_01432 2.54e-42 atpE - - C ko:K02110 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
LDDHDPMB_01433 3.54e-188 atpB - - C ko:K02108 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194,ko03110 it plays a direct role in the translocation of protons across the membrane
LDDHDPMB_01434 1.61e-261 metAA 2.3.1.46 - E ko:K00651 ko00270,ko00920,ko01100,ko01110,ko01230,map00270,map00920,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
LDDHDPMB_01435 0.0 - - - EGP - - - Major Facilitator Superfamily
LDDHDPMB_01436 6.66e-235 rihB 3.2.2.1, 3.2.2.8 - F ko:K01239,ko:K01250,ko:K10213 ko00230,ko00240,ko00760,ko01100,map00230,map00240,map00760,map01100 ko00000,ko00001,ko01000 Inosine-uridine preferring nucleoside hydrolase
LDDHDPMB_01438 2.08e-270 - - - - - - - -
LDDHDPMB_01439 5.62e-37 - - - - - - - -
LDDHDPMB_01440 2.44e-86 - - - - - - - -
LDDHDPMB_01441 9.79e-182 - - - D ko:K03466 - ko00000,ko03036 ftsk spoiiie
LDDHDPMB_01442 8.16e-159 - - - S - - - Plasmid replication protein
LDDHDPMB_01443 9.18e-49 - - - - - - - -
LDDHDPMB_01444 1.39e-284 - - - L - - - HNH endonuclease
LDDHDPMB_01445 1.17e-280 - - - H - - - Adenine-specific methyltransferase EcoRI
LDDHDPMB_01446 2.89e-292 - - - L - - - Phage integrase family
LDDHDPMB_01447 0.0 frc 2.8.3.15, 2.8.3.16 - C ko:K07544,ko:K07749 ko00623,ko01100,ko01120,ko01220,map00623,map01100,map01120,map01220 ko00000,ko00001,ko00002,ko01000 Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
LDDHDPMB_01448 4.97e-276 - 3.2.1.78 GH26 G ko:K01218 ko00051,ko02024,map00051,map02024 ko00000,ko00001,ko01000 hydrolase family 5
LDDHDPMB_01449 5.91e-222 - - - S ko:K07088 - ko00000 Membrane transport protein
LDDHDPMB_01450 0.0 oxc 4.1.1.8 - EH ko:K01577 ko00630,ko01100,map00630,map01100 ko00000,ko00001,ko01000 Thiamine pyrophosphate enzyme, central domain
LDDHDPMB_01451 0.0 - - - P - - - Voltage gated chloride channel
LDDHDPMB_01452 0.0 - - - M ko:K13735 ko05100,map05100 ko00000,ko00001 domain protein
LDDHDPMB_01453 0.0 - - - K - - - RNA polymerase II activating transcription factor binding
LDDHDPMB_01454 0.0 glgE 2.4.99.16 GH13 G ko:K16147 ko00500,ko01100,map00500,map01100 ko00000,ko00001,ko01000 Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1- 4)- glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB
LDDHDPMB_01455 3.01e-120 ppa 3.6.1.1 - C ko:K01507 ko00190,map00190 ko00000,ko00001,ko01000 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
LDDHDPMB_01456 3.16e-197 - - - - - - - -
LDDHDPMB_01457 1.67e-191 glnR - - KT - - - Transcriptional regulatory protein, C terminal
LDDHDPMB_01458 4.39e-178 nth 4.2.99.18 - L ko:K10773 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
LDDHDPMB_01459 0.0 - - - E ko:K02035 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 Bacterial extracellular solute-binding proteins, family 5 Middle
LDDHDPMB_01460 0.0 valS 6.1.1.9 - J ko:K01873 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
LDDHDPMB_01461 1e-135 lrp_3 - - K ko:K03719 - ko00000,ko03000,ko03036 helix_turn_helix ASNC type
LDDHDPMB_01462 1.91e-83 tyrA 5.4.99.5 - E ko:K04092 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Chorismate mutase type II
LDDHDPMB_01463 0.0 - - - S - - - domain protein
LDDHDPMB_01464 0.0 rho - - K ko:K03628 ko03018,map03018 ko00000,ko00001,ko03019,ko03021 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
LDDHDPMB_01465 0.0 - - - H - - - Flavin containing amine oxidoreductase
LDDHDPMB_01466 1.87e-68 - - - S - - - Protein of unknown function (DUF2469)
LDDHDPMB_01467 7.27e-252 - - - J - - - Acetyltransferase (GNAT) domain
LDDHDPMB_01468 0.0 gatB 6.3.5.6, 6.3.5.7 - J ko:K02434 ko00970,ko01100,map00970,map01100 ko00000,ko00001,ko01000,ko03029 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
LDDHDPMB_01469 0.0 gatA 6.3.5.6, 6.3.5.7 - F ko:K02433 ko00970,ko01100,map00970,map01100 ko00000,ko00001,ko01000,ko03029 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
LDDHDPMB_01470 4.42e-34 gatC 6.3.5.6, 6.3.5.7 - J ko:K02435 ko00970,ko01100,map00970,map01100 ko00000,ko00001,ko01000,ko03029 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
LDDHDPMB_01471 8.48e-198 - - - S - - - ABC-type transport system involved in multi-copper enzyme maturation permease component
LDDHDPMB_01472 2.77e-176 - - - V ko:K01990 - ko00000,ko00002,ko02000 ABC transporter
LDDHDPMB_01473 7.8e-196 trmH 2.1.1.34 - J ko:K00556 - ko00000,ko01000,ko03016 RNA methyltransferase TrmH family
LDDHDPMB_01474 6.33e-148 pyrE1 - - F - - - Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
LDDHDPMB_01475 0.0 - - - P - - - E1-E2 ATPase
LDDHDPMB_01476 0.0 clpB - - O ko:K03695,ko:K03696 ko01100,ko04213,map01100,map04213 ko00000,ko00001,ko03110 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
LDDHDPMB_01477 1.32e-201 - - - Q - - - Fumarylacetoacetate (FAA) hydrolase family
LDDHDPMB_01478 4.56e-109 - - - - - - - -
LDDHDPMB_01479 0.0 - - - M - - - domain protein
LDDHDPMB_01480 0.0 - - - Q - - - von Willebrand factor (vWF) type A domain
LDDHDPMB_01481 5.75e-244 - 3.4.22.70 - M ko:K07284 - ko00000,ko01000,ko01002,ko01011 Sortase family
LDDHDPMB_01482 3.91e-200 - - - S ko:K06997 - ko00000 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
LDDHDPMB_01483 3.88e-251 gluQ 6.1.1.17 - J ko:K01885 ko00860,ko00970,ko01100,ko01110,ko01120,map00860,map00970,map01100,map01110,map01120 ko00000,ko00001,ko00002,ko01000,ko01007,ko02048,ko03016 Belongs to the class-I aminoacyl-tRNA synthetase family
LDDHDPMB_01484 7.1e-236 - - - M - - - Protein of unknown function (DUF3152)
LDDHDPMB_01485 7.69e-170 glpF - - U ko:K02440 - ko00000,ko02000 Belongs to the MIP aquaporin (TC 1.A.8) family
LDDHDPMB_01489 6.82e-174 - - - T - - - Pfam Adenylate and Guanylate cyclase catalytic domain
LDDHDPMB_01490 3.61e-96 rplI - - J ko:K02939 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds to the 23S rRNA
LDDHDPMB_01491 1.06e-48 rpsR - - J ko:K02963 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
LDDHDPMB_01492 1.77e-124 ssb - - L ko:K03111 ko03030,ko03430,ko03440,map03030,map03430,map03440 ko00000,ko00001,ko03029,ko03032,ko03400 Single-stranded DNA-binding protein
LDDHDPMB_01493 5.36e-64 rpsF - - J ko:K02990 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011,ko03029 Binds together with S18 to 16S ribosomal RNA
LDDHDPMB_01494 8.13e-244 prs 2.7.6.1 - F ko:K00948 ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
LDDHDPMB_01495 9.03e-223 rbsK 2.7.1.15 - H ko:K00852 ko00030,map00030 ko00000,ko00001,ko01000 Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LDDHDPMB_01496 0.0 - - - EGP ko:K08168 - ko00000,ko00002,ko01504,ko02000 Major Facilitator Superfamily
LDDHDPMB_01497 3.76e-218 iunH2 3.2.2.1 - F ko:K01239 ko00230,ko00760,ko01100,map00230,map00760,map01100 ko00000,ko00001,ko01000 Inosine-uridine preferring nucleoside hydrolase
LDDHDPMB_01498 4.45e-253 - - - K ko:K02529 - ko00000,ko03000 helix_turn _helix lactose operon repressor
LDDHDPMB_01500 8.79e-10 - - - - - - - -
LDDHDPMB_01501 1.05e-299 glf 5.4.99.9 - M ko:K01854 ko00052,ko00520,map00052,map00520 ko00000,ko00001,ko01000 UDP-galactopyranose mutase
LDDHDPMB_01502 2.34e-266 amsE - - M - - - Glycosyl transferase family 2
LDDHDPMB_01504 3.65e-253 - - - S - - - Glycosyltransferase, group 2 family protein
LDDHDPMB_01505 0.0 - - - M - - - Psort location CytoplasmicMembrane, score 9.26
LDDHDPMB_01506 0.0 - - - M - - - Psort location CytoplasmicMembrane, score 9.26
LDDHDPMB_01507 0.0 glfT 2.4.1.288 GT2 S ko:K16650 - ko00000,ko01000,ko01003 Glycosyltransferase like family 2
LDDHDPMB_01508 2.57e-226 - - - M - - - Glycosyl hydrolases family 25
LDDHDPMB_01509 0.0 - - - M - - - Glycosyl hydrolases family 25
LDDHDPMB_01510 2.61e-239 tnp3503b - - L - - - Transposase and inactivated derivatives
LDDHDPMB_01511 1.62e-78 - - - S - - - Leucine-rich repeat (LRR) protein
LDDHDPMB_01512 3.31e-130 - - - M - - - hydrolase, family 25
LDDHDPMB_01513 1.2e-172 - - - - - - - -
LDDHDPMB_01514 0.0 - - - S - - - Polysaccharide pyruvyl transferase
LDDHDPMB_01515 0.0 - - - GM ko:K01990 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
LDDHDPMB_01516 5.64e-194 tagG - - U ko:K01992 - ko00000,ko00002,ko02000 Transport permease protein
LDDHDPMB_01517 0.0 - - - S - - - Glycosyltransferase like family 2
LDDHDPMB_01519 0.0 - - - M - - - 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
LDDHDPMB_01520 0.0 - - - M - - - 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
LDDHDPMB_01521 0.0 - - - S - - - Psort location Cytoplasmic, score 8.87
LDDHDPMB_01522 0.0 - - - V - - - ABC transporter permease
LDDHDPMB_01523 4.6e-249 - - - V ko:K02003 - ko00000,ko00002,ko02000 ABC transporter
LDDHDPMB_01524 8.09e-195 - - - T ko:K06950 - ko00000 HD domain
LDDHDPMB_01525 1.17e-217 - - - S - - - Glutamine amidotransferase domain
LDDHDPMB_01526 0.0 kup - - P ko:K03549 - ko00000,ko02000 Transport of potassium into the cell
LDDHDPMB_01527 1.7e-235 tatD - - L ko:K03424 - ko00000,ko01000 TatD related DNase
LDDHDPMB_01528 0.0 - 3.2.1.22 - G ko:K07407 ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score 8.87
LDDHDPMB_01529 6.89e-166 - - - - - - - -
LDDHDPMB_01530 0.0 - - - V ko:K06147 - ko00000,ko02000 ABC transporter
LDDHDPMB_01531 0.0 - - - V ko:K06147 - ko00000,ko02000 ABC transporter
LDDHDPMB_01532 0.0 metG 6.1.1.10 - J ko:K01874 ko00450,ko00970,map00450,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
LDDHDPMB_01533 2.01e-167 - - - - - - - -
LDDHDPMB_01534 9.93e-94 - - - - - - - -
LDDHDPMB_01535 3.49e-221 rsmI 2.1.1.198 - H ko:K07056 - ko00000,ko01000,ko03009 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
LDDHDPMB_01536 0.0 pmt 2.4.1.109 GT39 O ko:K00728 ko00514,ko00515,ko01100,map00514,map00515,map01100 ko00000,ko00001,ko01000,ko01003 C-terminal four TMM region of protein-O-mannosyltransferase
LDDHDPMB_01537 1.2e-201 - - - I - - - alpha/beta hydrolase fold
LDDHDPMB_01538 2.12e-174 dedA1 - - S ko:K03975 - ko00000 SNARE associated Golgi protein
LDDHDPMB_01540 6.19e-163 - - - S - - - GyrI-like small molecule binding domain
LDDHDPMB_01541 0.0 bgl2 3.2.1.21 GH3 G ko:K05349 ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110 ko00000,ko00001,ko01000 Fibronectin type III-like domain
LDDHDPMB_01542 4.71e-146 - - - K - - - Bacterial regulatory proteins, tetR family
LDDHDPMB_01543 1.2e-166 - - - S - - - HAD hydrolase, family IA, variant 3
LDDHDPMB_01544 1.43e-119 hspR - - K ko:K13640 - ko00000,ko03000 transcriptional regulator, MerR family
LDDHDPMB_01545 4.87e-238 dnaJ - - O ko:K03686,ko:K05516 - ko00000,ko03029,ko03036,ko03110 DnaJ molecular chaperone homology domain
LDDHDPMB_01546 6.25e-132 grpE - - O ko:K03687 - ko00000,ko03029,ko03110 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
LDDHDPMB_01547 0.0 dnaK - - O ko:K04043 ko03018,ko04212,ko05152,map03018,map04212,map05152 ko00000,ko00001,ko03019,ko03029,ko03110,ko04147 Heat shock 70 kDa protein
LDDHDPMB_01549 4.59e-247 - - - K - - - Psort location Cytoplasmic, score
LDDHDPMB_01550 8.73e-187 traX - - S - - - TraX protein
LDDHDPMB_01551 1.55e-190 - - - S ko:K07025 - ko00000 HAD-hyrolase-like
LDDHDPMB_01552 0.0 apuB 3.2.1.41, 3.2.1.68 CBM48,GH13 G ko:K01200,ko:K01214 ko00500,ko01100,ko01110,map00500,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Belongs to the glycosyl hydrolase 13 family
LDDHDPMB_01553 2.29e-226 malG - - G ko:K15772 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
LDDHDPMB_01554 0.0 malC - - G ko:K15771 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
LDDHDPMB_01555 5.8e-303 malE - - G ko:K15770 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Bacterial extracellular solute-binding protein
LDDHDPMB_01556 0.0 malL 2.4.1.4, 3.2.1.1, 3.2.1.20, 5.4.99.16 GH13,GH31 G ko:K01187,ko:K05341,ko:K05343 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 Alpha-amylase domain
LDDHDPMB_01557 0.0 malQ 2.4.1.25 GH77 G ko:K00705 ko00500,ko01100,map00500,map01100 ko00000,ko00001,ko01000 4-alpha-glucanotransferase
LDDHDPMB_01558 1.09e-131 - - - S - - - Protein of unknown function, DUF624
LDDHDPMB_01559 1.7e-197 - - - G ko:K02026,ko:K10119 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter permease
LDDHDPMB_01560 1.1e-199 msmF - - G ko:K10118 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
LDDHDPMB_01561 4.41e-232 - - - K - - - Psort location Cytoplasmic, score
LDDHDPMB_01563 8.24e-308 amyE - - G ko:K10117 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Bacterial extracellular solute-binding protein
LDDHDPMB_01564 0.0 - 3.2.1.20 GH31 G ko:K01187 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 Alpha-amylase domain
LDDHDPMB_01565 1.4e-148 gpm2 3.1.3.73 - G ko:K02226 ko00860,ko01100,map00860,map01100 ko00000,ko00001,ko00002,ko01000 Phosphoglycerate mutase family
LDDHDPMB_01566 4.02e-89 - - - S - - - Protein of unknown function (DUF4235)
LDDHDPMB_01567 1.44e-181 nfrA - - C - - - Nitroreductase family
LDDHDPMB_01568 4.78e-59 - - - - - - - -
LDDHDPMB_01569 3.96e-124 iolT - - EGP - - - Major facilitator Superfamily
LDDHDPMB_01570 8.79e-10 - - - - - - - -
LDDHDPMB_01571 7.7e-129 nadE 6.3.5.1 - H ko:K01950 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
LDDHDPMB_01572 0.0 nadE 6.3.5.1 - H ko:K01950 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
LDDHDPMB_01573 1.24e-55 - - - L ko:K07473 - ko00000,ko02048 RelB antitoxin
LDDHDPMB_01575 8.79e-10 - - - - - - - -
LDDHDPMB_01576 0.0 - - - G ko:K03292 - ko00000 Psort location CytoplasmicMembrane, score 10.00
LDDHDPMB_01577 0.0 - 3.2.1.185 GH127 S ko:K09955,ko:K18205 - ko00000,ko01000 Beta-L-arabinofuranosidase, GH127
LDDHDPMB_01578 2.59e-257 - - - K ko:K02529 - ko00000,ko03000 Periplasmic binding protein domain
LDDHDPMB_01579 2.72e-187 cobB2 - - K ko:K12410 - ko00000,ko01000 Sir2 family
LDDHDPMB_01580 1.43e-284 ilvA 4.3.1.19 - E ko:K01754 ko00260,ko00290,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00290,map01100,map01110,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Pyridoxal-phosphate dependent enzyme
LDDHDPMB_01581 0.0 - 3.2.1.10 GH13 G ko:K01182 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 Alpha amylase, catalytic domain protein
LDDHDPMB_01583 2.78e-237 - - - K - - - Psort location Cytoplasmic, score
LDDHDPMB_01584 0.0 - - - G - - - Raffinose synthase or seed imbibition protein Sip1
LDDHDPMB_01585 3.43e-206 - - - G ko:K10119 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
LDDHDPMB_01586 1.35e-238 - - - G ko:K10118 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
LDDHDPMB_01587 1.66e-308 - - - G ko:K10117 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Bacterial extracellular solute-binding protein
LDDHDPMB_01588 2.57e-297 - - - GK - - - ROK family
LDDHDPMB_01589 0.0 - 3.2.1.22 - G ko:K07407 ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603 ko00000,ko00001,ko01000 Glycosyl hydrolase family 36 N-terminal domain
LDDHDPMB_01590 4.78e-110 tadA 3.5.4.1, 3.5.4.33 - FJ ko:K01485,ko:K11991 ko00240,ko00330,ko01100,map00240,map00330,map01100 ko00000,ko00001,ko01000,ko03016 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
LDDHDPMB_01591 0.0 nhaP - - P ko:K03316 - ko00000 Sodium/hydrogen exchanger family
LDDHDPMB_01592 3.82e-232 - - - S ko:K06999 - ko00000 Phospholipase/Carboxylesterase
LDDHDPMB_01593 2.47e-253 - - - D - - - nuclear chromosome segregation
LDDHDPMB_01594 5.78e-143 dcd 3.5.4.13 - F ko:K01494 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the dCTP deaminase family
LDDHDPMB_01595 0.0 pacL2 3.6.3.8 - P ko:K01537 - ko00000,ko01000 Cation transporter/ATPase, N-terminus
LDDHDPMB_01596 3.62e-223 rlmB 2.1.1.185 - J ko:K03218 - ko00000,ko01000,ko03009 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
LDDHDPMB_01597 0.0 - - - KLT - - - Domain of unknown function (DUF4032)
LDDHDPMB_01598 6.27e-270 ugpC - - E ko:K10112 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Belongs to the ABC transporter superfamily
LDDHDPMB_01599 1.41e-241 - - - U ko:K10716 - ko00000,ko02000 Ion channel
LDDHDPMB_01600 0.0 - - - KLT - - - Protein tyrosine kinase
LDDHDPMB_01601 3.47e-114 - - - O - - - Thioredoxin
LDDHDPMB_01603 7.02e-285 rpfB - - S ko:K21688 - ko00000 G5
LDDHDPMB_01604 1.13e-208 ksgA 2.1.1.182 - J ko:K02528 - ko00000,ko01000,ko03009 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
LDDHDPMB_01605 1.44e-227 ispE 2.7.1.148 - F ko:K00919 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
LDDHDPMB_01606 1.51e-145 - - - S - - - LytR cell envelope-related transcriptional attenuator
LDDHDPMB_01607 0.0 pcnA 2.7.7.19, 2.7.7.72 - J ko:K00970,ko:K00974 ko03013,ko03018,map03013,map03018 ko00000,ko00001,ko01000,ko03016,ko03019 Probable RNA and SrmB- binding site of polymerase A
LDDHDPMB_01608 1.51e-239 mutT4 - - L - - - Belongs to the Nudix hydrolase family
LDDHDPMB_01609 0.0 - - - - - - - -
LDDHDPMB_01610 0.0 mviN - - KLT ko:K03980 - ko00000,ko01011,ko02000 MviN-like protein
LDDHDPMB_01611 2.29e-228 trxB 1.8.1.9 - C ko:K00384 ko00450,map00450 ko00000,ko00001,ko01000 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
LDDHDPMB_01612 0.0 parB - - K ko:K03497 - ko00000,ko03000,ko03036,ko04812 Belongs to the ParB family
LDDHDPMB_01613 2.2e-225 parA - - D ko:K03496 - ko00000,ko03036,ko04812 CobQ CobB MinD ParA nucleotide binding domain protein
LDDHDPMB_01614 1.82e-174 rsmG 2.1.1.170 - J ko:K03501 - ko00000,ko01000,ko03009,ko03036 Specifically methylates the N7 position of a guanine in 16S rRNA
LDDHDPMB_01615 4.13e-122 jag - - S ko:K06346 - ko00000 Putative single-stranded nucleic acids-binding domain
LDDHDPMB_01616 8.06e-234 yidC - - U ko:K03217 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044,ko03029 Membrane protein insertase, YidC Oxa1 family
LDDHDPMB_01617 9.33e-20 rpmH - - J ko:K02914 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL34 family

eggNOG-mapper v2.1.12 (Database: eggNOG v5.0.2, Mar. 2021 release)