ORF_ID e_value Gene_name EC_number CAZy COGs KEGG_ko KEGG_Pathway BRITE Description
LDIMBGKD_00001 0.0 dnaA - - L ko:K02313 ko02020,ko04112,map02020,map04112 ko00000,ko00001,ko03032,ko03036 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
LDIMBGKD_00002 7.9e-263 dnaN 2.7.7.7 - L ko:K02338 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
LDIMBGKD_00003 0.0 recF - - L ko:K03629 ko03440,map03440 ko00000,ko00001,ko03400 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
LDIMBGKD_00004 2.35e-117 - - - S - - - Protein of unknown function (DUF721)
LDIMBGKD_00005 0.0 gyrB 5.99.1.3 - L ko:K02470 - ko00000,ko01000,ko03032,ko03400 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
LDIMBGKD_00006 0.0 gyrA 5.99.1.3 - L ko:K02469 - ko00000,ko01000,ko03032,ko03400 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
LDIMBGKD_00007 2.65e-108 - - - S - - - Transmembrane domain of unknown function (DUF3566)
LDIMBGKD_00008 4.46e-277 - - - V - - - VanZ like family
LDIMBGKD_00009 7.84e-207 - - - S ko:K11068 - ko00000,ko02042 Haemolysin-III related
LDIMBGKD_00010 0.0 gdhA 1.4.1.4 - E ko:K00262 ko00220,ko00250,ko00910,ko01100,map00220,map00250,map00910,map01100 ko00000,ko00001,ko01000 Belongs to the Glu Leu Phe Val dehydrogenases family
LDIMBGKD_00011 8.47e-23 - - - EGP - - - Transporter major facilitator family protein
LDIMBGKD_00012 9.71e-253 - - - EGP - - - Transporter major facilitator family protein
LDIMBGKD_00013 6.85e-218 - 3.2.1.78 GH26 G ko:K01218 ko00051,ko02024,map00051,map02024 ko00000,ko00001,ko01000 Glycosyl hydrolase family 26
LDIMBGKD_00014 1.39e-95 mscL - - M ko:K03282 - ko00000,ko02000 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
LDIMBGKD_00015 3.45e-68 gcs2 - - S ko:K06048 - ko00000,ko01000 A circularly permuted ATPgrasp
LDIMBGKD_00018 4.87e-187 - - - S ko:K07043 - ko00000 Protein of unknown function DUF45
LDIMBGKD_00019 2.87e-101 - - - - - - - -
LDIMBGKD_00020 6.65e-198 - 3.6.4.12 - K ko:K03655 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Putative ATP-dependent DNA helicase recG C-terminal
LDIMBGKD_00021 0.0 uvrA3 - - L ko:K03701 ko03420,map03420 ko00000,ko00001,ko03400 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
LDIMBGKD_00022 2.44e-191 - - - Q - - - ubiE/COQ5 methyltransferase family
LDIMBGKD_00023 1.79e-214 - - - - - - - -
LDIMBGKD_00024 5.12e-139 - - - S ko:K19784 - ko00000 NADPH-dependent FMN reductase
LDIMBGKD_00025 9.04e-135 - - - - - - - -
LDIMBGKD_00026 7.71e-24 - - - - - - - -
LDIMBGKD_00027 1.59e-83 - - - K - - - Acetyltransferase (GNAT) domain
LDIMBGKD_00028 9.93e-35 - - - - - - - -
LDIMBGKD_00029 5.71e-73 - - - S - - - T5orf172
LDIMBGKD_00030 3.66e-93 - - - - - - - -
LDIMBGKD_00031 7.4e-71 - - - S - - - MazG-like family
LDIMBGKD_00032 0.0 - - - L ko:K09384 - ko00000 Uncharacterized conserved protein (DUF2075)
LDIMBGKD_00033 1.38e-172 - - - - - - - -
LDIMBGKD_00034 6.86e-276 - - - - - - - -
LDIMBGKD_00037 5.58e-142 - - - S ko:K09974 - ko00000 Domain of unknown function (DUF1287)
LDIMBGKD_00038 4.94e-83 - - - - - - - -
LDIMBGKD_00039 2.23e-315 - - - - - - - -
LDIMBGKD_00040 2.55e-194 - - - - - - - -
LDIMBGKD_00041 4.32e-05 - - - S - - - Domain of unknown function (DUF4190)
LDIMBGKD_00046 1.54e-110 dps - - P ko:K04047 - ko00000,ko03036 Belongs to the Dps family
LDIMBGKD_00047 1.1e-312 - - - P ko:K03699 - ko00000,ko02042 Transporter associated domain
LDIMBGKD_00048 6.07e-165 cah 4.2.1.1 - P ko:K01673 ko00910,map00910 ko00000,ko00001,ko01000 Reversible hydration of carbon dioxide
LDIMBGKD_00049 1.21e-273 - - - K - - - helix_turn _helix lactose operon repressor
LDIMBGKD_00050 1.79e-46 - - - - - - - -
LDIMBGKD_00051 6.86e-19 - - - U ko:K10547 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Branched-chain amino acid transport system / permease component
LDIMBGKD_00052 1.26e-105 - 3.6.3.17 - G ko:K02056,ko:K10545 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ATPases associated with a variety of cellular activities
LDIMBGKD_00053 1.59e-71 - - - - - - - -
LDIMBGKD_00054 2.57e-250 - - - K - - - helix_turn _helix lactose operon repressor
LDIMBGKD_00055 0.0 - 3.2.1.55 GH51 G ko:K01209 ko00520,map00520 ko00000,ko00001,ko01000 arabinose metabolic process
LDIMBGKD_00056 0.0 araB - - G - - - FGGY family of carbohydrate kinases, C-terminal domain
LDIMBGKD_00057 1.14e-166 araD 5.1.3.4 - G ko:K03077 ko00040,ko00053,ko01100,ko01120,map00040,map00053,map01100,map01120 ko00000,ko00001,ko00002,ko01000 Class II Aldolase and Adducin N-terminal domain
LDIMBGKD_00058 0.0 araA 5.3.1.4 - G ko:K01804 ko00040,ko01100,map00040,map01100 ko00000,ko00001,ko01000 Catalyzes the conversion of L-arabinose to L-ribulose
LDIMBGKD_00059 9.62e-215 - - - S - - - Oxidoreductase, aldo keto reductase family protein
LDIMBGKD_00060 0.0 ppc 4.1.1.31 - H ko:K01595 ko00620,ko00680,ko00710,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00710,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
LDIMBGKD_00061 0.0 - - - S - - - Threonine/Serine exporter, ThrE
LDIMBGKD_00062 2.9e-264 trpS 6.1.1.2 - J ko:K01867 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the class-I aminoacyl-tRNA synthetase family
LDIMBGKD_00063 1.4e-66 - - - S - - - Protein of unknown function (DUF3073)
LDIMBGKD_00064 3.73e-104 - - - I - - - Sterol carrier protein
LDIMBGKD_00065 0.0 glgP 2.4.1.1 GT35 G ko:K00688 ko00500,ko01100,ko01110,ko02026,ko04217,ko04910,ko04922,ko04931,map00500,map01100,map01110,map02026,map04217,map04910,map04922,map04931 ko00000,ko00001,ko01000 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
LDIMBGKD_00066 9.18e-49 - - - - - - - -
LDIMBGKD_00067 1.76e-164 gluP 3.4.21.105 - S ko:K19225 - ko00000,ko01000,ko01002 Rhomboid family
LDIMBGKD_00068 7.7e-229 - - - L - - - ribosomal rna small subunit methyltransferase
LDIMBGKD_00069 4.95e-47 crgA - - D - - - Involved in cell division
LDIMBGKD_00070 2.3e-176 - - - S - - - Bacterial protein of unknown function (DUF881)
LDIMBGKD_00071 1.07e-285 srtB 3.4.22.70 - M ko:K07284 - ko00000,ko01000,ko01002,ko01011 Sortase family
LDIMBGKD_00072 7.93e-156 trpG 2.6.1.85, 4.1.3.27 - EH ko:K01658,ko:K01664 ko00400,ko00405,ko00790,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00400,map00405,map00790,map01100,map01110,map01130,map01230,map02024,map02025 ko00000,ko00001,ko00002,ko01000 para-aminobenzoate synthase glutamine amidotransferase component II
LDIMBGKD_00073 0.0 pknB 2.7.11.1 - KLT ko:K08884,ko:K12132 - ko00000,ko01000,ko01001 Protein tyrosine kinase
LDIMBGKD_00074 1.37e-248 pknA 2.7.11.1 - T ko:K08884,ko:K12132 - ko00000,ko01000,ko01001 Protein tyrosine kinase
LDIMBGKD_00075 0.0 pbpA - - M ko:K05364 ko00550,map00550 ko00000,ko00001,ko01011 penicillin-binding protein
LDIMBGKD_00076 0.0 rodA - - D ko:K03588 ko04112,map04112 ko00000,ko00001,ko02000,ko03036 Belongs to the SEDS family
LDIMBGKD_00077 0.0 pstP 3.1.3.16 - T ko:K20074 - ko00000,ko01000,ko01009 Sigma factor PP2C-like phosphatases
LDIMBGKD_00078 2.44e-94 fhaB - - T - - - Inner membrane component of T3SS, cytoplasmic domain
LDIMBGKD_00079 1.83e-167 fhaA - - T - - - Protein of unknown function (DUF2662)
LDIMBGKD_00080 0.0 pepX 3.4.14.5 - E ko:K01278 ko04974,map04974 ko00000,ko00001,ko01000,ko01002,ko04090,ko04147 Dipeptidyl peptidase IV (DPP IV) N-terminal region
LDIMBGKD_00081 5.05e-161 - - - EG - - - EamA-like transporter family
LDIMBGKD_00082 1.26e-270 pldB 3.1.1.5 - I ko:K01048 ko00564,map00564 ko00000,ko00001,ko01000 Serine aminopeptidase, S33
LDIMBGKD_00083 3.36e-77 - - - - - - - -
LDIMBGKD_00084 1.14e-226 rrmA 2.1.1.187 - Q ko:K00563 - ko00000,ko01000,ko03009 Methyltransferase domain
LDIMBGKD_00085 1.09e-42 - - - S - - - Transglycosylase associated protein
LDIMBGKD_00086 1.87e-48 - - - S - - - Transglycosylase associated protein
LDIMBGKD_00088 0.0 fprA 1.18.1.2, 1.19.1.1 - C ko:K00528 - ko00000,ko01000 Pyridine nucleotide-disulphide oxidoreductase
LDIMBGKD_00089 0.0 - 3.6.3.4, 3.6.3.54 - P ko:K01533,ko:K17686 ko01524,ko04016,map01524,map04016 ko00000,ko00001,ko01000 E1-E2 ATPase
LDIMBGKD_00090 0.0 degP - - O ko:K08372 ko02020,map02020 ko00000,ko00001,ko01000,ko01002 Domain present in PSD-95, Dlg, and ZO-1/2.
LDIMBGKD_00091 6.47e-149 - 3.8.1.2 - S ko:K01560 ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120 ko00000,ko00001,ko01000 Haloacid dehalogenase-like hydrolase
LDIMBGKD_00092 0.0 - - - S ko:K07126 - ko00000 Sel1-like repeats.
LDIMBGKD_00093 0.0 tgt 2.4.2.29 - F ko:K00773 - ko00000,ko01000,ko03016 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
LDIMBGKD_00094 8e-86 - - - L - - - Phage integrase family
LDIMBGKD_00102 2.27e-116 - - - - - - - -
LDIMBGKD_00103 2.27e-85 - - - S - - - Phage capsid family
LDIMBGKD_00106 8.06e-232 htpX - - O ko:K03799 - ko00000,ko00002,ko01000,ko01002 Belongs to the peptidase M48B family
LDIMBGKD_00107 2.25e-269 - - - V - - - Beta-lactamase
LDIMBGKD_00108 2.03e-156 - - - E - - - SOS response associated peptidase (SRAP)
LDIMBGKD_00109 4.63e-293 - - - EGP ko:K08156,ko:K19577 - ko00000,ko02000 Major Facilitator Superfamily
LDIMBGKD_00110 2.14e-14 - - - S - - - NADPH-dependent FMN reductase
LDIMBGKD_00111 8.74e-69 - - - L ko:K07473 - ko00000,ko02048 RelB antitoxin
LDIMBGKD_00112 2.39e-113 ogt 2.1.1.63 - L ko:K00567,ko:K07443 - ko00000,ko01000,ko03400 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
LDIMBGKD_00113 2.38e-303 - - - S - - - cellulose binding
LDIMBGKD_00114 2.95e-169 - 4.1.1.44 - S ko:K01607 ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220 ko00000,ko00001,ko01000 Carboxymuconolactone decarboxylase family
LDIMBGKD_00115 9.26e-111 - 4.1.1.44 - S ko:K01607 ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220 ko00000,ko00001,ko01000 Cupin domain
LDIMBGKD_00116 2.08e-244 - - - S ko:K06889 - ko00000 Dienelactone hydrolase family
LDIMBGKD_00117 5.51e-206 - - - K - - - Bacterial regulatory helix-turn-helix protein, lysR family
LDIMBGKD_00118 1.17e-249 - 1.1.1.91 - C ko:K05882 - ko00000,ko01000 Aldo/keto reductase family
LDIMBGKD_00119 2.27e-05 - - - I - - - acetylesterase activity
LDIMBGKD_00120 0.0 - - - P - - - nitric oxide dioxygenase activity
LDIMBGKD_00121 5.81e-99 - - - C - - - Flavodoxin
LDIMBGKD_00122 1.68e-15 - - - K - - - transcriptional regulator, MerR family
LDIMBGKD_00123 1.97e-111 - - - C - - - Flavodoxin
LDIMBGKD_00124 2.6e-186 - - - GM - - - NmrA-like family
LDIMBGKD_00125 3.19e-261 adh 1.1.1.1 - C ko:K00001 ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220 ko00000,ko00001,ko01000 Zinc-binding dehydrogenase
LDIMBGKD_00126 8.19e-213 - - - K - - - LysR substrate binding domain
LDIMBGKD_00127 0.0 - 3.2.1.8, 3.5.1.104 - G ko:K01181,ko:K22278 - ko00000,ko01000 Polysaccharide deacetylase
LDIMBGKD_00128 8.45e-249 fbaA 4.1.2.13 - G ko:K01624 ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Fructose-bisphosphate aldolase class-II
LDIMBGKD_00130 4.86e-316 purA 6.3.4.4 - F ko:K01939 ko00230,ko00250,ko01100,map00230,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
LDIMBGKD_00131 3.73e-224 crcB - - U ko:K06199 - ko00000,ko02000 Important for reducing fluoride concentration in the cell, thus reducing its toxicity
LDIMBGKD_00132 7.85e-84 crcB - - U ko:K06199 - ko00000,ko02000 Important for reducing fluoride concentration in the cell, thus reducing its toxicity
LDIMBGKD_00133 1.81e-302 - - - U ko:K01997,ko:K11956 ko02010,ko02024,map02010,map02024 ko00000,ko00001,ko00002,ko02000 Belongs to the binding-protein-dependent transport system permease family
LDIMBGKD_00134 1.38e-209 livM - - U ko:K01998 ko02010,ko02024,map02010,map02024 ko00000,ko00001,ko00002,ko02000 Belongs to the binding-protein-dependent transport system permease family
LDIMBGKD_00135 1.67e-202 - - - E ko:K01995 ko02010,ko02024,map02010,map02024 ko00000,ko00001,ko00002,ko02000 Branched-chain amino acid ATP-binding cassette transporter
LDIMBGKD_00136 1.45e-189 livF - - E ko:K01996 ko02010,ko02024,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ATPases associated with a variety of cellular activities
LDIMBGKD_00137 1.73e-287 livK - - E ko:K01999 ko02010,ko02024,map02010,map02024 ko00000,ko00001,ko00002,ko02000 Receptor family ligand binding region
LDIMBGKD_00138 1.66e-243 - - - K ko:K03484 - ko00000,ko03000 helix_turn _helix lactose operon repressor
LDIMBGKD_00139 0.0 gtfA 2.4.1.7 GH13 G ko:K00690 ko00500,map00500 ko00000,ko00001,ko01000 Domain of unknown function (DUF1964)
LDIMBGKD_00140 0.0 - - - G - - - Transporter major facilitator family protein
LDIMBGKD_00142 0.0 - - - S - - - Protein of unknown function DUF262
LDIMBGKD_00143 0.0 - - - S - - - Protein of unknown function DUF262
LDIMBGKD_00145 1.13e-145 livK - - E ko:K01999 ko02010,ko02024,map02010,map02024 ko00000,ko00001,ko00002,ko02000 Receptor family ligand binding region
LDIMBGKD_00146 2.67e-255 accBC3 6.3.4.14, 6.4.1.2, 6.4.1.3 - I ko:K11263 ko00061,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200,map01212 ko00000,ko00001,ko00002,ko01000 Biotin carboxylase C-terminal domain
LDIMBGKD_00147 1.45e-232 - - - S - - - Domain of unknown function (DUF4392)
LDIMBGKD_00148 0.0 scrT - - G - - - Transporter major facilitator family protein
LDIMBGKD_00149 6.95e-120 - - - S - - - Acetyltransferase (GNAT) family
LDIMBGKD_00150 2.26e-64 - - - S - - - Protein of unknown function (DUF1778)
LDIMBGKD_00152 0.0 - - - EGP - - - Sugar (and other) transporter
LDIMBGKD_00153 1.53e-258 ilvC 1.1.1.86 - H ko:K00053 ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00770,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
LDIMBGKD_00154 0.0 - 3.1.1.53 - E ko:K05970 - ko00000,ko01000 Carbohydrate esterase, sialic acid-specific acetylesterase
LDIMBGKD_00155 1.05e-280 - - - E - - - GDSL-like Lipase/Acylhydrolase family
LDIMBGKD_00156 0.0 bglA 3.2.1.21 - G ko:K05350 ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110 ko00000,ko00001,ko01000 Glycosyl hydrolase family 1
LDIMBGKD_00157 5.33e-247 - - - G - - - Bacterial extracellular solute-binding protein
LDIMBGKD_00158 3.91e-281 - - - G - - - Bacterial extracellular solute-binding protein
LDIMBGKD_00159 7.61e-208 - - - U ko:K02025 - ko00000,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
LDIMBGKD_00160 1e-188 - - - U ko:K02026 - ko00000,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
LDIMBGKD_00161 0.0 - 3.2.1.25 - G ko:K01192 ko00511,ko04142,map00511,map04142 ko00000,ko00001,ko01000 beta-mannosidase
LDIMBGKD_00162 4.29e-232 - - - K - - - helix_turn _helix lactose operon repressor
LDIMBGKD_00163 4.07e-143 - - - S - - - Protein of unknown function, DUF624
LDIMBGKD_00164 3.25e-166 - - - - - - - -
LDIMBGKD_00165 7.2e-32 - - - - - - - -
LDIMBGKD_00166 0.0 - - - G - - - N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase)
LDIMBGKD_00168 8.53e-172 - - - V ko:K02068 - ko00000,ko00002,ko02000 ATPases associated with a variety of cellular activities
LDIMBGKD_00169 1.42e-187 - - - V ko:K02069 - ko00000,ko00002,ko02000 Uncharacterised protein family (UPF0014)
LDIMBGKD_00170 0.0 aroP - - E ko:K03293,ko:K11732 - ko00000,ko02000 aromatic amino acid transport protein AroP K03293
LDIMBGKD_00171 5.82e-165 - - - V ko:K02003 - ko00000,ko00002,ko02000 ABC transporter
LDIMBGKD_00172 0.0 - - - V ko:K02004 - ko00000,ko00002,ko02000 FtsX-like permease family
LDIMBGKD_00173 0.0 - - - E ko:K03293 - ko00000 Amino acid permease
LDIMBGKD_00174 1.08e-43 - - - V ko:K02004 - ko00000,ko00002,ko02000 efflux transmembrane transporter activity
LDIMBGKD_00176 0.0 - - - M - - - MacB-like periplasmic core domain
LDIMBGKD_00177 3.58e-106 - - - V ko:K02003 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
LDIMBGKD_00178 7.97e-137 - - - K - - - helix_turn_helix multiple antibiotic resistance protein
LDIMBGKD_00179 0.0 - - - V ko:K06147 - ko00000,ko02000 ABC transporter, ATP-binding protein
LDIMBGKD_00180 0.0 - - - V ko:K06147 - ko00000,ko02000 ABC transporter transmembrane region
LDIMBGKD_00181 0.0 - 3.5.1.104 - G ko:K22278 - ko00000,ko01000 Polysaccharide deacetylase
LDIMBGKD_00182 5.42e-158 - 3.6.1.27 - I ko:K19302 ko00550,map00550 ko00000,ko00001,ko01000,ko01011 Acid phosphatase homologues
LDIMBGKD_00183 6.76e-151 - 2.3.1.18, 2.3.1.79 - S ko:K00633,ko:K00661 - ko00000,ko01000 Maltose acetyltransferase
LDIMBGKD_00184 1.34e-98 - - - - - - - -
LDIMBGKD_00186 8.85e-291 livK - - E ko:K01999 ko02010,ko02024,map02010,map02024 ko00000,ko00001,ko00002,ko02000 Receptor family ligand binding region
LDIMBGKD_00187 2.75e-136 - - - K - - - Psort location Cytoplasmic, score 8.87
LDIMBGKD_00188 2.68e-162 - - - S ko:K01421 - ko00000 YhgE Pip domain protein
LDIMBGKD_00189 1.94e-237 - - - S ko:K01421 - ko00000 YhgE Pip domain protein
LDIMBGKD_00190 0.0 - - - S ko:K01421 - ko00000 YhgE Pip domain protein
LDIMBGKD_00191 2.58e-139 - - - S ko:K16926 - ko00000,ko00002,ko02000 Hypothetical bacterial integral membrane protein (Trep_Strep)
LDIMBGKD_00192 8.97e-170 - - - P ko:K16785 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Cobalt transport protein
LDIMBGKD_00193 0.0 - - - G ko:K16786,ko:K16787 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ATPases associated with a variety of cellular activities
LDIMBGKD_00194 9.66e-229 - - - P ko:K02077,ko:K09815 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment
LDIMBGKD_00195 3.97e-211 - - - S - - - esterase of the alpha-beta hydrolase superfamily
LDIMBGKD_00196 9.61e-43 - - - K - - - transcriptional regulator
LDIMBGKD_00197 4.45e-145 - - - - - - - -
LDIMBGKD_00199 0.0 - - - E ko:K08659 - ko00000,ko01000,ko01002 Peptidase family C69
LDIMBGKD_00200 7.53e-156 icaR - - K - - - Bacterial regulatory proteins, tetR family
LDIMBGKD_00201 1.95e-301 ftsY - - U ko:K03110 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
LDIMBGKD_00202 1.79e-300 amt - - U ko:K03320 - ko00000,ko02000 Ammonium Transporter Family
LDIMBGKD_00203 6.28e-73 glnB - - K ko:K04751 ko02020,map02020 ko00000,ko00001 Nitrogen regulatory protein P-II
LDIMBGKD_00204 0.0 glnD 2.7.7.59 - O ko:K00990 ko02020,map02020 ko00000,ko00001,ko01000 Nucleotidyltransferase domain
LDIMBGKD_00205 3.38e-51 - - - K - - - sequence-specific DNA binding
LDIMBGKD_00206 0.0 dnaB 3.6.4.12 - L ko:K02314 ko03030,ko04112,map03030,map04112 ko00000,ko00001,ko01000,ko03032 Participates in initiation and elongation during chromosome replication
LDIMBGKD_00207 0.0 murE - - M - - - Domain of unknown function (DUF1727)
LDIMBGKD_00208 6.15e-183 cobQ2 - - S ko:K07009 - ko00000 CobB/CobQ-like glutamine amidotransferase domain
LDIMBGKD_00209 3.85e-69 - - - S - - - granule-associated protein
LDIMBGKD_00210 0.0 - - - S ko:K03688 - ko00000 ABC1 family
LDIMBGKD_00211 5.84e-252 glpQ 3.1.4.46 - C ko:K01126 ko00564,map00564 ko00000,ko00001,ko01000 Glycerophosphoryl diester phosphodiesterase family
LDIMBGKD_00212 5.67e-151 upp 2.4.2.9 - F ko:K00761 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko01000 Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
LDIMBGKD_00213 2.45e-168 - - - - - - - -
LDIMBGKD_00214 3.02e-261 mutT 3.6.1.55 - LT ko:K03574 - ko00000,ko01000,ko03400 Phosphoglycerate mutase family
LDIMBGKD_00215 0.0 ppk 2.7.4.1 - P ko:K00937 ko00190,ko03018,map00190,map03018 ko00000,ko00001,ko01000,ko03019 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
LDIMBGKD_00216 2.4e-94 - - - D - - - bacterial-type flagellum organization
LDIMBGKD_00217 1.65e-290 cpaF - - U ko:K02283 - ko00000,ko02035,ko02044 Type II IV secretion system protein
LDIMBGKD_00218 6.94e-148 - - - U ko:K12510 - ko00000,ko02044 Type ii secretion system
LDIMBGKD_00219 3.55e-127 - - - U - - - Type II secretion system (T2SS), protein F
LDIMBGKD_00220 4.93e-52 - - - S - - - Protein of unknown function (DUF4244)
LDIMBGKD_00221 7.13e-52 - - - U - - - TadE-like protein
LDIMBGKD_00222 1.75e-97 - - - S - - - TIGRFAM helicase secretion neighborhood TadE-like protein
LDIMBGKD_00223 0.0 dnaX 2.7.7.7 - L ko:K02343 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase III subunit gamma tau
LDIMBGKD_00224 8.17e-141 recR - - L ko:K06187 ko03440,map03440 ko00000,ko00001,ko03400 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
LDIMBGKD_00225 2.52e-173 ask 2.7.2.4 - E ko:K00928 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Amino acid kinase family
LDIMBGKD_00226 5.79e-126 ask 2.7.2.4 - E ko:K00928 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 ACT domain
LDIMBGKD_00227 2.38e-252 asd 1.2.1.11 - E ko:K00133 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
LDIMBGKD_00228 2.82e-154 - - - - - - - -
LDIMBGKD_00229 0.0 leuA 2.3.3.13 - E ko:K01649 ko00290,ko00620,ko01100,ko01110,ko01210,ko01230,map00290,map00620,map01100,map01110,map01210,map01230 br01601,ko00000,ko00001,ko00002,ko01000 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
LDIMBGKD_00230 0.0 pbp5 - - M - - - Transglycosylase
LDIMBGKD_00231 2.86e-274 ino1 5.5.1.4 - I ko:K01858 ko00521,ko00562,ko01100,ko01130,map00521,map00562,map01100,map01130 ko00000,ko00001,ko01000 Myo-inositol-1-phosphate synthase
LDIMBGKD_00232 4.9e-281 - - - I - - - PAP2 superfamily
LDIMBGKD_00233 0.0 topA 5.99.1.2 - L ko:K03168 - ko00000,ko01000,ko03032,ko03400 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
LDIMBGKD_00234 2.72e-142 tmk 2.7.4.9 - F ko:K00943 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
LDIMBGKD_00235 2.34e-285 holB 2.7.7.7 - L ko:K02341 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase III
LDIMBGKD_00236 7.95e-180 - - - S ko:K06910 - ko00000 Phosphatidylethanolamine-binding protein
LDIMBGKD_00237 0.0 - - - E ko:K08659 - ko00000,ko01000,ko01002 Peptidase family C69
LDIMBGKD_00238 0.0 pepD - - E ko:K08659 - ko00000,ko01000,ko01002 Peptidase family C69
LDIMBGKD_00239 3.43e-281 - - - S ko:K07133 - ko00000 Domain of unknown function (DUF4143)
LDIMBGKD_00240 0.0 fhs 6.3.4.3 - F ko:K01938 ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Formate-tetrahydrofolate ligase
LDIMBGKD_00241 9.48e-83 - - - S - - - Macrophage migration inhibitory factor (MIF)
LDIMBGKD_00242 5.83e-255 - - - S - - - Protein conserved in bacteria
LDIMBGKD_00243 1.74e-130 - - - S - - - GtrA-like protein
LDIMBGKD_00244 3.38e-224 - - - - - - - -
LDIMBGKD_00245 1.98e-155 - - - G - - - Phosphoglycerate mutase family
LDIMBGKD_00246 0.0 - - - EGP - - - Major Facilitator Superfamily
LDIMBGKD_00247 0.0 gltX 6.1.1.17 - J ko:K01885 ko00860,ko00970,ko01100,ko01110,ko01120,map00860,map00970,map01100,map01110,map01120 ko00000,ko00001,ko00002,ko01000,ko01007,ko02048,ko03016 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
LDIMBGKD_00250 0.0 - - - S - - - Calcineurin-like phosphoesterase
LDIMBGKD_00251 1.13e-185 ltbR - - K - - - Transcriptional regulator, IclR family, C-terminal domain protein
LDIMBGKD_00252 0.0 leuC 4.2.1.33, 4.2.1.35 - E ko:K01703 ko00290,ko00660,ko00966,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map00966,map01100,map01110,map01210,map01230 br01601,ko00000,ko00001,ko00002,ko01000 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
LDIMBGKD_00253 8.41e-165 leuD 4.2.1.33, 4.2.1.35 - E ko:K01704 ko00290,ko00660,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map01100,map01110,map01210,map01230 br01601,ko00000,ko00001,ko00002,ko01000 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
LDIMBGKD_00254 5.98e-55 - - - K - - - Lrp/AsnC ligand binding domain
LDIMBGKD_00255 0.0 nox - - C - - - Pyridine nucleotide-disulphide oxidoreductase
LDIMBGKD_00256 4.71e-316 murA 2.5.1.7 - M ko:K00790 ko00520,ko00550,ko01100,map00520,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
LDIMBGKD_00257 1.57e-202 plsC2 2.3.1.51 - I ko:K00655 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko01004 Phosphate acyltransferases
LDIMBGKD_00258 1.02e-202 gpsA 1.1.1.94 - I ko:K00057 ko00564,ko01110,map00564,map01110 ko00000,ko00001,ko01000 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
LDIMBGKD_00259 3.61e-278 ddl 6.3.2.4 - F ko:K01921 ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502 ko00000,ko00001,ko01000,ko01011 Belongs to the D-alanine--D-alanine ligase family
LDIMBGKD_00260 1.67e-156 - - - S - - - Domain of unknown function (DUF4854)
LDIMBGKD_00261 7.83e-235 - - - S - - - CAAX protease self-immunity
LDIMBGKD_00262 4.62e-186 - - - M - - - Mechanosensitive ion channel
LDIMBGKD_00263 9.92e-149 - - - K - - - Bacterial regulatory proteins, tetR family
LDIMBGKD_00264 2.81e-295 - - - S - - - Psort location Cytoplasmic, score 8.87
LDIMBGKD_00265 3.21e-209 - - - S - - - Putative ABC-transporter type IV
LDIMBGKD_00266 1.04e-290 - 2.6.1.1 - E ko:K11358 ko00220,ko00250,ko00270,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko01000,ko01007 Psort location Cytoplasmic, score 8.87
LDIMBGKD_00267 0.0 - - - S - - - Psort location Cytoplasmic, score 8.87
LDIMBGKD_00268 0.0 - - - S - - - Psort location Cytoplasmic, score 8.87
LDIMBGKD_00269 3.96e-253 - - - G - - - pfkB family carbohydrate kinase
LDIMBGKD_00270 3.36e-42 rpmB - - J ko:K02902 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal L28 family
LDIMBGKD_00271 0.0 recG 3.6.4.12 - L ko:K03655 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 helicase superfamily c-terminal domain
LDIMBGKD_00272 1.59e-129 rsmD 2.1.1.171 - L ko:K08316 - ko00000,ko01000,ko03009 Conserved hypothetical protein 95
LDIMBGKD_00273 1.47e-203 trmD 2.1.1.228 - J ko:K00554 - ko00000,ko01000,ko03016 Belongs to the RNA methyltransferase TrmD family
LDIMBGKD_00274 3.03e-154 rimM - - J ko:K02860 - ko00000,ko03009 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
LDIMBGKD_00275 4.08e-62 - - - S ko:K06960 - ko00000 Belongs to the UPF0109 family
LDIMBGKD_00276 8.95e-94 rpsP - - J ko:K02959 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011,ko03029 Belongs to the bacterial ribosomal protein bS16 family
LDIMBGKD_00277 0.0 lacZ 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score 8.87
LDIMBGKD_00278 9.76e-282 - - - S - - - Endonuclease/Exonuclease/phosphatase family
LDIMBGKD_00279 1.62e-205 - - - P - - - Cation efflux family
LDIMBGKD_00280 0.0 ffh 3.6.5.4 - U ko:K03106 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko01000,ko02044 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
LDIMBGKD_00281 0.0 tnpA - - L - - - Transposase
LDIMBGKD_00282 0.0 cysS 6.1.1.16 - J ko:K01883 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the class-I aminoacyl-tRNA synthetase family
LDIMBGKD_00283 0.0 yjjK - - S ko:K15738 - ko00000,ko02000 ABC transporter
LDIMBGKD_00284 6.62e-176 - 6.3.5.2 - F ko:K01951 ko00230,ko00983,ko01100,map00230,map00983,map01100 ko00000,ko00001,ko00002,ko01000,ko01002 Peptidase C26
LDIMBGKD_00285 1.08e-119 ilvN 2.2.1.6 - E ko:K01653 ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 ACT domain
LDIMBGKD_00286 0.0 ilvB 2.2.1.6 - H ko:K01652 ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Thiamine pyrophosphate enzyme, central domain
LDIMBGKD_00287 3.18e-181 rnc 3.1.26.3 - J ko:K03685 ko03008,ko05205,map03008,map05205 ko00000,ko00001,ko01000,ko03009,ko03019,ko03036 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
LDIMBGKD_00288 4.3e-40 rpmF - - J ko:K02911 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011,ko03029 Belongs to the bacterial ribosomal protein bL32 family
LDIMBGKD_00289 6.25e-144 - - - S ko:K07040 - ko00000 Uncharacterized ACR, COG1399
LDIMBGKD_00290 1.03e-156 - - - - - - - -
LDIMBGKD_00291 2.39e-113 coaD 2.7.7.3 - H ko:K00954 ko00770,ko01100,map00770,map01100 ko00000,ko00001,ko00002,ko01000 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
LDIMBGKD_00292 2.64e-67 - - - S - - - Protein of unknown function (DUF3039)
LDIMBGKD_00293 1.73e-248 - - - C ko:K19265 - ko00000,ko01000 Aldo/keto reductase family
LDIMBGKD_00294 8.55e-317 pncB 6.3.4.21 - F ko:K00763 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko01000 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
LDIMBGKD_00295 8.13e-59 - - - - - - - -
LDIMBGKD_00296 1.39e-173 rph 2.7.7.56 - J ko:K00989 - ko00000,ko01000,ko03016 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
LDIMBGKD_00297 2.59e-170 rdgB 3.6.1.66 - F ko:K02428 ko00230,map00230 ko00000,ko00001,ko01000 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
LDIMBGKD_00298 2.98e-313 - - - V ko:K12554 ko00550,ko01100,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Psort location Cytoplasmic, score 8.87
LDIMBGKD_00299 1.29e-234 - - - S ko:K07088 - ko00000 Auxin Efflux Carrier
LDIMBGKD_00302 9.96e-287 manC 2.7.7.13 - M ko:K00971 ko00051,ko00520,ko01100,ko01110,map00051,map00520,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Mannose-6-phosphate isomerase
LDIMBGKD_00303 0.0 pgi 5.3.1.9 - G ko:K01810 ko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the GPI family
LDIMBGKD_00304 1.67e-79 rplS - - J ko:K02884 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
LDIMBGKD_00305 3.61e-175 lepB 3.4.21.89 - U ko:K03100 ko02024,ko03060,map02024,map03060 ko00000,ko00001,ko01000,ko01002 Belongs to the peptidase S26 family
LDIMBGKD_00306 5.07e-185 rnhB 3.1.26.4 - L ko:K03470 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
LDIMBGKD_00307 2.31e-191 lolD - - V ko:K02003 - ko00000,ko00002,ko02000 ATPases associated with a variety of cellular activities
LDIMBGKD_00308 0.0 - - - V - - - Efflux ABC transporter, permease protein
LDIMBGKD_00309 1.06e-103 - - - S ko:K07088 - ko00000 Transporter, auxin efflux carrier (AEC) family protein
LDIMBGKD_00310 3.5e-39 - - - S ko:K07088 - ko00000 Transporter, auxin efflux carrier (AEC) family protein
LDIMBGKD_00311 5.31e-295 dapE 3.5.1.18 - E ko:K01439 ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230 ko00000,ko00001,ko00002,ko01000 Peptidase dimerisation domain
LDIMBGKD_00312 0.0 rne 3.1.26.12 - J ko:K08300,ko:K08301 ko03018,map03018 ko00000,ko00001,ko00002,ko01000,ko03009,ko03019 Ribonuclease E/G family
LDIMBGKD_00313 2.89e-61 rplU - - J ko:K02888 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This protein binds to 23S rRNA in the presence of protein L20
LDIMBGKD_00314 1.23e-52 rpmA - - J ko:K02899 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal L27 protein
LDIMBGKD_00315 0.0 obg - - S ko:K03979 - ko00000,ko01000,ko03009 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
LDIMBGKD_00316 1.76e-261 proB 2.7.2.11 - E ko:K00931 ko00330,ko00332,ko01100,ko01130,ko01230,map00330,map00332,map01100,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
LDIMBGKD_00317 6.85e-295 aspC 2.6.1.1, 2.6.1.2, 2.6.1.66 - E ko:K00812,ko:K08969,ko:K10907,ko:K14260 ko00220,ko00250,ko00270,ko00290,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00290,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 DegT/DnrJ/EryC1/StrS aminotransferase family
LDIMBGKD_00319 5.51e-46 secE - - U ko:K03073 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
LDIMBGKD_00320 5.07e-202 nusG - - K ko:K02601 - ko00000,ko03009,ko03021 Participates in transcription elongation, termination and antitermination
LDIMBGKD_00321 3.53e-92 rplK - - J ko:K02867 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
LDIMBGKD_00322 6.6e-159 rplA - - J ko:K02863 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
LDIMBGKD_00323 8.38e-188 - - - QT - - - PucR C-terminal helix-turn-helix domain
LDIMBGKD_00324 2.76e-215 birA 6.3.4.15 - H ko:K03524 ko00780,ko01100,map00780,map01100 ko00000,ko00001,ko01000,ko03000 Biotin/lipoate A/B protein ligase family
LDIMBGKD_00325 3.33e-133 bioY - - S ko:K03523 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 BioY family
LDIMBGKD_00326 0.0 accC 6.3.4.14, 6.4.1.2, 6.4.1.3 - I ko:K11263 ko00061,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200,map01212 ko00000,ko00001,ko00002,ko01000 Carbamoyl-phosphate synthase L chain, ATP binding domain protein
LDIMBGKD_00327 0.0 pccB - - I - - - Carboxyl transferase domain
LDIMBGKD_00328 0.0 fas - - I ko:K11533 ko00061,ko01100,ko01212,ko04931,map00061,map01100,map01212,map04931 ko00000,ko00001,ko00002,ko01000,ko01004 Beta-ketoacyl synthase, C-terminal domain
LDIMBGKD_00329 1.39e-102 acpS 2.7.8.7 - I ko:K00997 ko00770,map00770 ko00000,ko00001,ko01000 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
LDIMBGKD_00331 4.41e-156 - - - - - - - -
LDIMBGKD_00332 9.29e-238 ldh 1.1.1.27 - C ko:K00016 ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922 ko00000,ko00001,ko01000,ko04147 Belongs to the LDH MDH superfamily
LDIMBGKD_00333 2.28e-65 rpsO - - J ko:K02956 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
LDIMBGKD_00334 0.0 pnp 2.7.7.8 - J ko:K00962 ko00230,ko00240,ko03018,map00230,map00240,map03018 ko00000,ko00001,ko00002,ko01000,ko03016,ko03019 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction
LDIMBGKD_00336 1.79e-126 lemA - - S ko:K03744 - ko00000 LemA family
LDIMBGKD_00337 0.0 - - - S - - - Predicted membrane protein (DUF2207)
LDIMBGKD_00338 2.7e-237 nrdF 1.17.4.1 - F ko:K00526 ko00230,ko00240,ko01100,map00230,map00240,map01100 ko00000,ko00001,ko00002,ko01000,ko03400 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
LDIMBGKD_00339 0.0 nrdE 1.17.4.1 - F ko:K00525 ko00230,ko00240,ko01100,map00230,map00240,map01100 ko00000,ko00001,ko00002,ko01000,ko03400 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
LDIMBGKD_00340 2.38e-100 nrdI - - F ko:K03647 - ko00000 Probably involved in ribonucleotide reductase function
LDIMBGKD_00341 1.04e-27 nrdH - - O ko:K06191 - ko00000 Glutaredoxin
LDIMBGKD_00342 6.5e-213 - - - C - - - Oxidoreductase, aldo keto reductase family protein
LDIMBGKD_00343 0.0 - - - O ko:K08303 ko05120,map05120 ko00000,ko00001,ko01000,ko01002 Peptidase family U32 C-terminal domain
LDIMBGKD_00344 1.04e-287 yfiH - - Q ko:K05810 - ko00000,ko01000 Multi-copper polyphenol oxidoreductase laccase
LDIMBGKD_00345 8.04e-192 ispD 1.1.1.405, 2.7.7.40, 2.7.7.60 - I ko:K00991,ko:K21681 ko00040,ko00900,ko01100,ko01110,ko01130,map00040,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP)
LDIMBGKD_00346 7.74e-172 pcp 3.4.19.3 - O ko:K01304 - ko00000,ko01000,ko01002 Removes 5-oxoproline from various penultimate amino acid residues except L-proline
LDIMBGKD_00347 6.8e-185 - - - D - - - nuclear chromosome segregation
LDIMBGKD_00348 0.0 pepC2 3.4.22.40 - E ko:K01372 - ko00000,ko01000,ko01002 Peptidase C1-like family
LDIMBGKD_00349 4.82e-260 aroG 2.5.1.54 - E ko:K01626 ko00400,ko01100,ko01110,ko01130,ko01230,ko02024,map00400,map01100,map01110,map01130,map01230,map02024 ko00000,ko00001,ko00002,ko01000 Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
LDIMBGKD_00350 0.0 - - - I - - - Psort location CytoplasmicMembrane, score 9.99
LDIMBGKD_00351 9.45e-305 aroG 2.5.1.54 - E ko:K01626 ko00400,ko01100,ko01110,ko01130,ko01230,ko02024,map00400,map01100,map01110,map01130,map01230,map02024 ko00000,ko00001,ko00002,ko01000 Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
LDIMBGKD_00352 2.15e-155 mtnN 3.2.2.9 - E ko:K01243 ko00270,ko01100,ko01230,map00270,map01100,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
LDIMBGKD_00353 4.35e-279 phoR 2.7.13.3 - T ko:K07636,ko:K07768 ko02020,map02020 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 His Kinase A (phosphoacceptor) domain
LDIMBGKD_00354 2.56e-166 regX3 - - KT ko:K07776 ko02020,map02020 ko00000,ko00001,ko00002,ko02022 Transcriptional regulatory protein, C terminal
LDIMBGKD_00355 6.3e-261 pstS - - P ko:K02040 ko02010,ko02020,ko05152,map02010,map02020,map05152 ko00000,ko00001,ko00002,ko02000 Part of the ABC transporter complex PstSACB involved in phosphate import
LDIMBGKD_00356 2.63e-218 pstC - - P ko:K02037 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 probably responsible for the translocation of the substrate across the membrane
LDIMBGKD_00357 1.53e-221 pstA - - P ko:K02038 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Phosphate transport system permease
LDIMBGKD_00358 1.51e-188 pstB 3.6.3.27 - P ko:K02036 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
LDIMBGKD_00359 3e-187 pstS - - P ko:K02040 ko02010,ko02020,ko05152,map02010,map02020,map05152 ko00000,ko00001,ko00002,ko02000 Part of the ABC transporter complex PstSACB involved in phosphate import
LDIMBGKD_00360 2.3e-155 pstC - - P ko:K02037 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 probably responsible for the translocation of the substrate across the membrane
LDIMBGKD_00361 8.62e-165 pstA - - P ko:K02038 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Phosphate transport system permease
LDIMBGKD_00362 2.12e-179 pstB 3.6.3.27 - P ko:K02036 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
LDIMBGKD_00363 0.0 - - - S ko:K06901 - ko00000,ko02000 Permease family
LDIMBGKD_00364 3.99e-209 - - - P ko:K02077 - ko00000,ko00002,ko02000 Zinc-uptake complex component A periplasmic
LDIMBGKD_00365 2.13e-114 rplJ - - J ko:K02864 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
LDIMBGKD_00366 9.38e-68 rplL - - J ko:K02935 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
LDIMBGKD_00367 0.0 - - - T - - - Forkhead associated domain
LDIMBGKD_00368 0.0 - - - L - - - Superfamily I DNA and RNA helicases and helicase subunits
LDIMBGKD_00369 2.19e-52 - - - - - - - -
LDIMBGKD_00370 8.73e-132 - - - NO - - - SAF
LDIMBGKD_00371 1.76e-43 - - - S - - - Putative regulatory protein
LDIMBGKD_00372 7.44e-177 ygfA 6.3.3.2 - H ko:K01934 ko00670,ko01100,map00670,map01100 ko00000,ko00001,ko01000 5-formyltetrahydrofolate cyclo-ligase family
LDIMBGKD_00373 4.67e-103 rimJ 2.3.1.128 - J ko:K03790 - ko00000,ko01000,ko03009 Acetyltransferase (GNAT) domain
LDIMBGKD_00374 4.06e-256 - - - - - - - -
LDIMBGKD_00375 1.86e-63 groS - - O ko:K04078 - ko00000,ko03029,ko03110 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
LDIMBGKD_00379 2.06e-35 rpmG - - J ko:K02913 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal protein L33
LDIMBGKD_00380 2.74e-302 murB 1.3.1.98 - M ko:K00075 ko00520,ko00550,ko01100,map00520,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Cell wall formation
LDIMBGKD_00381 0.0 - - - E ko:K03294 - ko00000 aromatic amino acid transport protein AroP K03293
LDIMBGKD_00382 4.15e-80 fdxA - - C ko:K05524 - ko00000 4Fe-4S binding domain
LDIMBGKD_00383 7.49e-282 dapC - - E - - - Aminotransferase class I and II
LDIMBGKD_00384 0.0 dinB 2.7.7.7 - L ko:K02346 - ko00000,ko01000,ko03400 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
LDIMBGKD_00386 1e-243 pdxB - - EH - - - Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
LDIMBGKD_00387 3.01e-147 yigZ - - S - - - Uncharacterized protein family UPF0029
LDIMBGKD_00388 1.73e-157 - - - - - - - -
LDIMBGKD_00389 0.0 malQ 2.4.1.25 GH77 G ko:K00705 ko00500,ko01100,map00500,map01100 ko00000,ko00001,ko01000 4-alpha-glucanotransferase
LDIMBGKD_00390 1.31e-103 rplM - - J ko:K02871 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
LDIMBGKD_00391 6.69e-97 rpsI - - J ko:K02996 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the universal ribosomal protein uS9 family
LDIMBGKD_00392 0.0 glgX 3.2.1.196, 3.2.1.68 CBM48,GH13 G ko:K01214,ko:K02438 ko00500,ko01100,ko01110,map00500,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Belongs to the glycosyl hydrolase 13 family
LDIMBGKD_00393 2.74e-266 - - - GK - - - transcriptional repressor of nag (N-acetylglucosamine) operon K02565
LDIMBGKD_00394 0.0 adhE 1.1.1.1, 1.2.1.10, 1.2.1.81 - C ko:K04072,ko:K15515 ko00010,ko00071,ko00350,ko00620,ko00625,ko00626,ko00650,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00620,map00625,map00626,map00650,map01100,map01110,map01120,map01130,map01220 ko00000,ko00001,ko01000 belongs to the iron- containing alcohol dehydrogenase family
LDIMBGKD_00395 1.96e-224 - - - K - - - Psort location Cytoplasmic, score
LDIMBGKD_00396 2.52e-197 - - - S - - - YwiC-like protein
LDIMBGKD_00397 6.58e-68 rpsJ - - J ko:K02946 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Involved in the binding of tRNA to the ribosomes
LDIMBGKD_00398 1.06e-153 rplC - - J ko:K02906 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
LDIMBGKD_00399 3.41e-151 rplD - - J ko:K02926 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms part of the polypeptide exit tunnel
LDIMBGKD_00400 1.79e-61 rplW - - J ko:K02892 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
LDIMBGKD_00401 2.32e-196 rplB - - J ko:K02886 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
LDIMBGKD_00402 6.95e-63 rpsS - - J ko:K02965 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
LDIMBGKD_00403 2.68e-75 rplV - - J ko:K02890 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
LDIMBGKD_00404 2.32e-176 rpsC - - J ko:K02982 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
LDIMBGKD_00405 1.15e-99 rplP - - J ko:K02878 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
LDIMBGKD_00406 5.27e-49 rpmC - - J ko:K02904 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the universal ribosomal protein uL29 family
LDIMBGKD_00407 7.84e-55 rpsQ - - J ko:K02961 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
LDIMBGKD_00408 5.15e-79 rplN - - J ko:K02874 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
LDIMBGKD_00409 4.44e-68 rplX - - J ko:K02895 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
LDIMBGKD_00410 1.94e-136 rplE - - J ko:K02931 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
LDIMBGKD_00411 4.97e-40 rpsN - - J ko:K02954 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
LDIMBGKD_00412 9.65e-91 rpsH - - J ko:K02994 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
LDIMBGKD_00413 6.61e-123 rplF - - J ko:K02933 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
LDIMBGKD_00414 5.96e-77 rplR - - J ko:K02881 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
LDIMBGKD_00415 6.25e-132 rpsE - - J ko:K02988 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
LDIMBGKD_00416 1.75e-33 rpmD - - J ko:K02907 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal protein L30p/L7e
LDIMBGKD_00417 1.14e-99 rplO - - J ko:K02876 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 binds to the 23S rRNA
LDIMBGKD_00418 0.0 secY - - U ko:K03076 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
LDIMBGKD_00419 8.9e-131 adk 2.7.4.3 - F ko:K00939 ko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000,ko04147 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
LDIMBGKD_00420 4.86e-45 infA - - J ko:K02518 - ko00000,ko03012 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
LDIMBGKD_00421 1.03e-20 rpmJ - - J ko:K02919 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL36 family
LDIMBGKD_00422 1.17e-81 rpsM - - J ko:K02952 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
LDIMBGKD_00423 1.73e-84 rpsK - - J ko:K02948 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
LDIMBGKD_00424 1.4e-236 rpoA 2.7.7.6 - K ko:K03040 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
LDIMBGKD_00425 3.33e-92 rplQ - - J ko:K02879 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal protein L17
LDIMBGKD_00426 7.4e-189 truA 5.4.99.12 - J ko:K06173 - ko00000,ko01000,ko03016 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
LDIMBGKD_00428 2.42e-207 - - - - - - - -
LDIMBGKD_00429 6.28e-249 nusA - - K ko:K02600 - ko00000,ko03009,ko03021 Participates in both transcription termination and antitermination
LDIMBGKD_00430 0.0 infB - - J ko:K02519 - ko00000,ko03012,ko03029 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
LDIMBGKD_00431 2.71e-117 rbfA - - J ko:K02834 - ko00000,ko03009 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
LDIMBGKD_00432 4.78e-249 truB 5.4.99.25 - J ko:K03177 - ko00000,ko01000,ko03016 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
LDIMBGKD_00433 9.91e-302 ribF 2.7.1.26, 2.7.7.2 - H ko:K11753 ko00740,ko01100,ko01110,map00740,map01100,map01110 ko00000,ko00001,ko00002,ko01000 riboflavin kinase
LDIMBGKD_00434 0.0 radA - - O ko:K04485 - ko00000,ko03400 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
LDIMBGKD_00435 4.56e-128 - - - - - - - -
LDIMBGKD_00436 5.05e-07 - - - S - - - Mitochondrial domain of unknown function (DUF1713)
LDIMBGKD_00437 2.05e-164 rpiA 5.3.1.6 - G ko:K01807 ko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
LDIMBGKD_00438 2.52e-238 rnhA 3.1.26.4 - L ko:K03469 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
LDIMBGKD_00440 2.27e-307 serS 6.1.1.11 - J ko:K01875 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
LDIMBGKD_00441 3.98e-277 - - - I - - - Diacylglycerol kinase catalytic domain
LDIMBGKD_00442 0.0 pgm 5.4.2.2 - G ko:K01835 ko00010,ko00030,ko00052,ko00230,ko00500,ko00520,ko00521,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00052,map00230,map00500,map00520,map00521,map01100,map01110,map01120,map01130 ko00000,ko00001,ko00002,ko01000 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
LDIMBGKD_00443 0.0 - - - S ko:K06889 - ko00000 alpha beta
LDIMBGKD_00444 4.9e-145 - - - S - - - Protein of unknown function (DUF4125)
LDIMBGKD_00445 0.0 - - - S - - - Domain of unknown function (DUF4037)
LDIMBGKD_00446 8.64e-163 tcsR3 - - K - - - helix_turn_helix, Lux Regulon
LDIMBGKD_00447 0.0 tcsS3 - - KT - - - PspC domain
LDIMBGKD_00448 0.0 pspC - - KT - - - PspC domain
LDIMBGKD_00449 1.96e-139 - - - - - - - -
LDIMBGKD_00450 6.98e-285 metC1 4.4.1.8 - E ko:K01760 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Cys/Met metabolism PLP-dependent enzyme
LDIMBGKD_00451 6.12e-157 - 2.5.1.49 - E ko:K01740 ko00270,ko01100,map00270,map01100 ko00000,ko00001,ko01000 Cys/Met metabolism PLP-dependent enzyme
LDIMBGKD_00452 4.38e-14 - - - E - - - Cys/Met metabolism PLP-dependent enzyme
LDIMBGKD_00454 0.0 lysS 6.1.1.6 - J ko:K04567 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the class-II aminoacyl-tRNA synthetase family
LDIMBGKD_00455 4.72e-179 - - - - - - - -
LDIMBGKD_00456 0.0 - - - E - - - Phospholipase B
LDIMBGKD_00457 0.0 pepC 3.4.22.40 - E ko:K01372 - ko00000,ko01000,ko01002 Peptidase C1-like family
LDIMBGKD_00458 0.0 - - - E ko:K20265 ko02024,map02024 ko00000,ko00001,ko02000 Amino acid permease
LDIMBGKD_00459 0.0 - - - E - - - Serine carboxypeptidase
LDIMBGKD_00460 0.0 - - - E - - - Amino acid permease
LDIMBGKD_00461 1.49e-101 menA 2.5.1.74 - H ko:K02548 ko00130,ko01100,ko01110,map00130,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko01006 Belongs to the MenA family. Type 1 subfamily
LDIMBGKD_00462 2.91e-179 gpmA 5.4.2.11 - G ko:K01834 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
LDIMBGKD_00463 0.0 - 4.2.1.53 - S ko:K10254 - ko00000,ko01000 MCRA family
LDIMBGKD_00464 2.22e-82 - 1.6.5.5 - C ko:K00344 - ko00000,ko01000 Zinc-binding dehydrogenase
LDIMBGKD_00465 1.33e-158 - 1.6.5.5 - C ko:K00344 - ko00000,ko01000 Zinc-binding dehydrogenase
LDIMBGKD_00466 0.0 manA 5.3.1.8 - G ko:K01809 ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Phosphomannose isomerase type I
LDIMBGKD_00467 2.41e-29 - - - - - - - -
LDIMBGKD_00468 1.08e-287 senX3 2.7.13.3 - T ko:K07768 ko02020,map02020 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 ATPase histidine kinase DNA gyrase B HSP90 domain protein
LDIMBGKD_00469 4.13e-156 phoU - - P ko:K02039 - ko00000 Plays a role in the regulation of phosphate uptake
LDIMBGKD_00470 2.42e-268 serC 2.6.1.52 - E ko:K00831 ko00260,ko00680,ko00750,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map00750,map01100,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
LDIMBGKD_00471 2.72e-228 - - - S - - - CHAP domain
LDIMBGKD_00472 8.17e-140 - - - M ko:K21471 - ko00000,ko01000,ko01002,ko01011 NlpC/P60 family
LDIMBGKD_00473 8.87e-252 - - - T - - - Universal stress protein family
LDIMBGKD_00474 1.07e-94 - - - O - - - OsmC-like protein
LDIMBGKD_00475 1.12e-223 thyA 2.1.1.45 - F ko:K00560 ko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523 ko00000,ko00001,ko00002,ko01000 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
LDIMBGKD_00476 1.46e-170 folA 1.5.1.3 - H ko:K00287 ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523 ko00000,ko00001,ko00002,ko01000 dihydrofolate reductase
LDIMBGKD_00477 4.23e-129 ptpA 3.1.3.48 - T ko:K01104 - ko00000,ko01000 low molecular weight
LDIMBGKD_00478 8.25e-70 galE 5.1.3.2 - M ko:K01784 ko00052,ko00520,ko01100,map00052,map00520,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the NAD(P)-dependent epimerase dehydratase family
LDIMBGKD_00479 1.64e-145 galE 5.1.3.2 - M ko:K01784 ko00052,ko00520,ko01100,map00052,map00520,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the NAD(P)-dependent epimerase dehydratase family
LDIMBGKD_00480 8.89e-205 trmB 2.1.1.33 - J ko:K03439 - ko00000,ko01000,ko03016 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
LDIMBGKD_00482 1.86e-244 - - - S - - - DUF218 domain
LDIMBGKD_00483 5.09e-239 - 3.1.3.5 - S ko:K01081 ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110 ko00000,ko00001,ko01000 5'-nucleotidase
LDIMBGKD_00484 9.29e-138 - - - - - - - -
LDIMBGKD_00485 0.0 - - - L ko:K07459 - ko00000 AAA ATPase domain
LDIMBGKD_00487 1.02e-63 - - - S - - - Cutinase
LDIMBGKD_00488 0.0 - - - S - - - Uncharacterized protein conserved in bacteria (DUF2130)
LDIMBGKD_00489 0.0 - - - S - - - Psort location Cytoplasmic, score 8.87
LDIMBGKD_00490 1.89e-187 - - - S - - - Domain of unknown function (DUF4194)
LDIMBGKD_00491 9.61e-298 - - - S - - - Psort location Cytoplasmic, score 8.87
LDIMBGKD_00492 0.0 - - - S - - - Psort location Cytoplasmic, score 8.87
LDIMBGKD_00493 9.81e-300 - - - S - - - Psort location Cytoplasmic, score 8.87
LDIMBGKD_00495 2.83e-84 - - - K - - - Protein of unknown function, DUF488
LDIMBGKD_00496 0.0 gph - - G ko:K16209 - ko00000,ko02000 Psort location CytoplasmicMembrane, score 10.00
LDIMBGKD_00497 0.0 lacZ6 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score 8.87
LDIMBGKD_00498 3.14e-250 lacZ6 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score 8.87
LDIMBGKD_00499 2.83e-236 - - - K ko:K02529 - ko00000,ko03000 Transcriptional regulator, LacI family
LDIMBGKD_00500 6.7e-160 - 3.8.1.2 - S ko:K01560 ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120 ko00000,ko00001,ko01000 Haloacid dehalogenase-like hydrolase
LDIMBGKD_00501 3.21e-79 - - - - - - - -
LDIMBGKD_00502 7.24e-122 - - - S - - - Domain of unknown function (DUF4190)
LDIMBGKD_00503 5.97e-106 - - - S - - - Domain of unknown function (DUF4190)
LDIMBGKD_00504 2.28e-260 - - - G ko:K02027 - ko00000,ko00002,ko02000 Bacterial extracellular solute-binding protein
LDIMBGKD_00505 0.0 bga1 3.2.1.23 - G ko:K12308 ko00052,map00052 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score 8.87
LDIMBGKD_00506 7.36e-225 - - - G ko:K02026 - ko00000,ko00002,ko02000 ABC transporter permease
LDIMBGKD_00507 1.42e-224 - - - G ko:K02025 - ko00000,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
LDIMBGKD_00508 2.41e-239 - - - K - - - Periplasmic binding protein domain
LDIMBGKD_00512 5.74e-241 - - - M - - - Glycosyltransferase like family 2
LDIMBGKD_00513 0.0 - - - S - - - AI-2E family transporter
LDIMBGKD_00514 2.55e-307 - - - M - - - Glycosyl transferase family 21
LDIMBGKD_00515 1.78e-207 natA - - V ko:K01990 - ko00000,ko00002,ko02000 ATPases associated with a variety of cellular activities
LDIMBGKD_00516 0.0 - - - - ko:K01992 - ko00000,ko00002,ko02000 -
LDIMBGKD_00517 5.29e-288 dacB 3.4.16.4 - M ko:K07259 ko00550,map00550 ko00000,ko00001,ko01000,ko01002,ko01011 D-Ala-D-Ala carboxypeptidase 3 (S13) family
LDIMBGKD_00518 2.89e-273 tilS 2.4.2.8, 6.3.4.19 - J ko:K00760,ko:K04075 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 ko00000,ko00001,ko01000,ko03016 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
LDIMBGKD_00519 2.77e-128 hpt 2.4.2.8 - F ko:K00760 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 ko00000,ko00001,ko01000 Belongs to the purine pyrimidine phosphoribosyltransferase family
LDIMBGKD_00520 0.0 ftsH - - O ko:K03798 - ko00000,ko00002,ko01000,ko01002,ko03110 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
LDIMBGKD_00521 1.73e-184 folK 2.7.6.3, 4.1.2.25 - H ko:K13940 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
LDIMBGKD_00522 7.39e-148 - - - S - - - Protein of unknown function (DUF3180)
LDIMBGKD_00523 4.03e-221 tesB - - I ko:K10805 ko01040,map01040 ko00000,ko00001,ko01000,ko01004 Thioesterase-like superfamily
LDIMBGKD_00524 0.0 yjjK - - S - - - ATP-binding cassette protein, ChvD family
LDIMBGKD_00525 4.14e-91 fms 3.5.1.88 - J ko:K01462 - ko00000,ko01000 Removes the formyl group from the N-terminal Met of newly synthesized proteins
LDIMBGKD_00526 0.0 - 2.5.1.49 - H ko:K01740 ko00270,ko01100,map00270,map01100 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score 9.98
LDIMBGKD_00527 6.02e-145 - - - S ko:K16925 - ko00000,ko00002,ko02000 ABC-type cobalt transport system, permease component
LDIMBGKD_00528 3.38e-121 - - - - - - - -
LDIMBGKD_00529 1.96e-39 - - - - - - - -
LDIMBGKD_00531 5.84e-223 - - - - - - - -
LDIMBGKD_00532 2.97e-47 rpmE - - J ko:K02909 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds the 23S rRNA
LDIMBGKD_00533 0.0 xylA 5.3.1.5 - G ko:K01805 ko00040,ko00051,ko01100,map00040,map00051,map01100 ko00000,ko00001,ko01000 Belongs to the xylose isomerase family
LDIMBGKD_00534 0.0 - 3.2.1.37, 3.2.1.55 GH43,GH51 G ko:K01198,ko:K01209 ko00520,ko01100,map00520,map01100 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 43 family
LDIMBGKD_00535 2.16e-240 - - - K ko:K02529,ko:K17640 - ko00000,ko03000 Bacterial regulatory proteins, lacI family
LDIMBGKD_00536 1.19e-309 - - - G ko:K02027,ko:K10117 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter periplasmic binding protein YcjN precursor K02027
LDIMBGKD_00537 3.1e-246 - - - U ko:K02025,ko:K10118 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
LDIMBGKD_00538 8.77e-203 - - - P ko:K02026,ko:K10119,ko:K17243 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
LDIMBGKD_00539 0.0 - 3.2.1.37 GH43 G ko:K01198 ko00520,ko01100,map00520,map01100 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 43 family
LDIMBGKD_00540 5.49e-246 - 3.1.1.53 - G ko:K05970 - ko00000,ko01000 Glycosyl hydrolase family 2, sugar binding domain protein
LDIMBGKD_00541 9.56e-226 - 3.1.1.53 - G ko:K05970 - ko00000,ko01000 Glycosyl hydrolase family 2, sugar binding domain protein
LDIMBGKD_00542 1.07e-297 - - CE10 I ko:K03929 - ko00000,ko01000 Belongs to the type-B carboxylesterase lipase family
LDIMBGKD_00543 0.0 - - - G - - - candidate polyfunctional acetylxylan esterase b-xylosidase A-L-arabinofuranosidase, CBM9 module, glycoside hydrolase family 43 protein and carbohydrate esterase family 6 protein K01238
LDIMBGKD_00544 0.0 xylB 2.7.1.17 - G ko:K00854 ko00040,ko01100,map00040,map01100 ko00000,ko00001,ko00002,ko01000 FGGY family of carbohydrate kinases, C-terminal domain
LDIMBGKD_00545 6.36e-296 xylR - - GK - - - ROK family
LDIMBGKD_00546 9.15e-49 rpmE - - J ko:K02909 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds the 23S rRNA
LDIMBGKD_00547 9.55e-217 prfA - - J ko:K02835 - ko00000,ko03012 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
LDIMBGKD_00548 9.47e-225 prmC 2.1.1.297 - J ko:K02493 - ko00000,ko01000,ko03012 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
LDIMBGKD_00549 4.33e-149 ywlC 2.7.7.87 - J ko:K07566 - ko00000,ko01000,ko03009,ko03016 Belongs to the SUA5 family
LDIMBGKD_00550 1.04e-268 rfe 2.7.8.33, 2.7.8.35 - M ko:K02851 - ko00000,ko01000,ko01003,ko01005 Glycosyl transferase family 4
LDIMBGKD_00551 0.0 guaB 1.1.1.205 - F ko:K00088 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko04147 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth
LDIMBGKD_00552 1.09e-158 orn - - L ko:K13288 ko03008,map03008 ko00000,ko00001,ko01000,ko03009,ko03019 3'-to-5' exoribonuclease specific for small oligoribonucleotides
LDIMBGKD_00553 9.93e-200 - - - S - - - Sucrose-6F-phosphate phosphohydrolase
LDIMBGKD_00554 0.0 - - - L - - - PIF1-like helicase
LDIMBGKD_00555 7.39e-98 - - - - - - - -
LDIMBGKD_00556 0.0 proS 6.1.1.15 - J ko:K01881 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
LDIMBGKD_00557 7.16e-173 - - - L ko:K03111 ko03030,ko03430,ko03440,map03030,map03430,map03440 ko00000,ko00001,ko03029,ko03032,ko03400 Single-strand binding protein family
LDIMBGKD_00558 0.0 pepO 3.4.24.11, 3.4.24.71 - O ko:K01389,ko:K01415,ko:K07386 ko04614,ko04640,ko04974,ko05010,map04614,map04640,map04974,map05010 ko00000,ko00001,ko01000,ko01002,ko04090,ko04147 Peptidase family M13
LDIMBGKD_00559 1.78e-133 - - - S - - - Short repeat of unknown function (DUF308)
LDIMBGKD_00560 7.19e-125 map 3.4.11.18 - E ko:K01265 - ko00000,ko01000,ko01002 Methionine aminopeptidase
LDIMBGKD_00561 2.72e-23 map 3.4.11.18 - E ko:K01265 - ko00000,ko01000,ko01002 Methionine aminopeptidase
LDIMBGKD_00562 0.0 gltA 2.3.3.1 - C ko:K01647 ko00020,ko00630,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map01100,map01110,map01120,map01130,map01200,map01210,map01230 br01601,ko00000,ko00001,ko00002,ko01000 Citrate synthase, C-terminal domain
LDIMBGKD_00563 6.33e-109 rlmH 2.1.1.177 - J ko:K00783 - ko00000,ko01000,ko03009 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
LDIMBGKD_00564 1.57e-236 dapD 2.3.1.117 - E ko:K00674 ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2- amino-6-oxopimelate using succinyl-CoA
LDIMBGKD_00565 2.34e-265 prfB - - J ko:K02836 - ko00000,ko03012 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
LDIMBGKD_00566 1.64e-298 ftsE - - D ko:K09812 ko02010,map02010 ko00000,ko00001,ko00002,ko02000,ko03036 Cell division ATP-binding protein FtsE
LDIMBGKD_00567 2.42e-209 ftsX - - D ko:K09811 ko02010,map02010 ko00000,ko00001,ko00002,ko02000,ko03036 Part of the ABC transporter FtsEX involved in cellular division
LDIMBGKD_00568 3.74e-282 - - - D ko:K21471 - ko00000,ko01000,ko01002,ko01011 CHAP domain protein
LDIMBGKD_00569 1.36e-105 smpB - - J ko:K03664 - ko00000 the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
LDIMBGKD_00570 3.92e-213 glnH - - ET ko:K02030 - ko00000,ko00002,ko02000 ABC transporter, substrate-binding protein, family 3
LDIMBGKD_00571 3.75e-215 glnH - - ET ko:K02030 - ko00000,ko00002,ko02000 ABC transporter, substrate-binding protein, family 3
LDIMBGKD_00572 6.2e-208 yecS - - E ko:K02029 - ko00000,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
LDIMBGKD_00573 1.06e-196 tcyC 3.6.3.21 - E ko:K02028,ko:K02029 - ko00000,ko00002,ko01000,ko02000 ATPases associated with a variety of cellular activities
LDIMBGKD_00574 2.66e-231 - - - K - - - Psort location Cytoplasmic, score
LDIMBGKD_00575 1.98e-164 - - - K - - - helix_turn_helix, Lux Regulon
LDIMBGKD_00576 0.0 glmS 2.6.1.16 - M ko:K00820 ko00250,ko00520,ko01100,ko01130,ko04931,map00250,map00520,map01100,map01130,map04931 ko00000,ko00001,ko01000,ko01002 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
LDIMBGKD_00577 2.61e-184 - 5.4.99.28, 5.4.99.29 - J ko:K06177 - ko00000,ko01000,ko03009,ko03016 RNA pseudouridylate synthase
LDIMBGKD_00578 1.51e-87 - - - - - - - -
LDIMBGKD_00579 1.14e-175 coaX 2.7.1.33 - H ko:K03525 ko00770,ko01100,map00770,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
LDIMBGKD_00580 0.0 - - - E ko:K02035 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter, substrate-binding protein, family 5
LDIMBGKD_00581 9.83e-213 - - - P ko:K02033 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
LDIMBGKD_00582 1.24e-200 - - - EP ko:K02034 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
LDIMBGKD_00583 2.03e-180 oppDF2 - - P ko:K02031,ko:K02032,ko:K02034 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 ATPases associated with a variety of cellular activities
LDIMBGKD_00584 1.51e-178 - - - E ko:K02032 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 ATPases associated with a variety of cellular activities
LDIMBGKD_00585 5.09e-283 metB 2.5.1.48 - E ko:K01739 ko00270,ko00450,ko00920,ko01100,ko01110,ko01130,ko01230,map00270,map00450,map00920,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Cys/Met metabolism PLP-dependent enzyme
LDIMBGKD_00586 5.12e-243 cbs 2.5.1.47, 4.2.1.22 - E ko:K01697,ko:K01738 ko00260,ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00260,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Pyridoxal-phosphate dependent enzyme
LDIMBGKD_00587 2.45e-240 recQ 3.6.4.12 - L ko:K03654 ko03018,map03018 ko00000,ko00001,ko01000,ko03400 ATP-dependent DNA helicase RecQ
LDIMBGKD_00588 1.54e-184 recQ 3.6.4.12 - L ko:K03654 ko03018,map03018 ko00000,ko00001,ko01000,ko03400 ATP-dependent DNA helicase RecQ
LDIMBGKD_00589 2.87e-157 - - - S - - - Protein conserved in bacteria
LDIMBGKD_00590 1.29e-135 - - - J - - - Acetyltransferase (GNAT) domain
LDIMBGKD_00593 4.02e-52 - - - S - - - Protein of unknown function (DUF1706)
LDIMBGKD_00595 4.17e-69 - - - - - - - -
LDIMBGKD_00596 8.75e-83 - - - K - - - Acetyltransferase (GNAT) domain
LDIMBGKD_00597 1.55e-85 mutT 3.6.1.55 - L ko:K03574 - ko00000,ko01000,ko03400 NUDIX domain
LDIMBGKD_00598 2.75e-140 - - - L - - - DNA mismatch repair enzyme MutH
LDIMBGKD_00599 2.55e-258 - - - H - - - C-5 cytosine-specific DNA methylase
LDIMBGKD_00600 6.16e-90 - - - L ko:K07454 - ko00000 HNH endonuclease
LDIMBGKD_00601 1.46e-117 - - - S - - - Protein of unknown function (DUF4065)
LDIMBGKD_00602 1.52e-117 - - - S ko:K07341 - ko00000,ko02048 Fic/DOC family
LDIMBGKD_00603 1.18e-113 - - - K - - - Acetyltransferase (GNAT) domain
LDIMBGKD_00604 8.38e-189 - - - S - - - 3-oxo-5-alpha-steroid 4-dehydrogenase
LDIMBGKD_00605 9.33e-238 gldA 1.1.1.6 - C ko:K00005,ko:K08317 ko00561,ko00640,ko01100,map00561,map00640,map01100 ko00000,ko00001,ko01000 Iron-containing alcohol dehydrogenase
LDIMBGKD_00606 8.52e-122 luxS 4.4.1.21 - H ko:K07173 ko00270,ko01100,ko01230,ko02024,ko02026,ko05111,map00270,map01100,map01230,map02024,map02026,map05111 ko00000,ko00001,ko00002,ko01000 Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
LDIMBGKD_00607 1.21e-129 cysE - - J - - - COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LDIMBGKD_00608 0.0 alr 5.1.1.1 - M ko:K01775 ko00473,ko01100,ko01502,map00473,map01100,map01502 ko00000,ko00001,ko01000,ko01011 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
LDIMBGKD_00609 0.0 dnaG - - L ko:K02316 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
LDIMBGKD_00610 7.79e-281 - - - P - - - Citrate transporter
LDIMBGKD_00612 0.0 dxs 2.2.1.7 - H ko:K01662 ko00730,ko00900,ko01100,ko01110,ko01130,map00730,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
LDIMBGKD_00613 6.53e-111 purE 5.4.99.18 - F ko:K01588 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
LDIMBGKD_00614 1.2e-286 purK 6.3.4.18 - F ko:K01589 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
LDIMBGKD_00615 2.8e-92 fur - - P ko:K03711 - ko00000,ko03000 Belongs to the Fur family
LDIMBGKD_00616 0.0 lysX - - S - - - Uncharacterised conserved protein (DUF2156)
LDIMBGKD_00617 0.0 - - - S - - - Putative esterase
LDIMBGKD_00618 1.11e-304 purD 6.3.3.1, 6.3.4.13 - F ko:K01945,ko:K11788 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Belongs to the GARS family
LDIMBGKD_00619 1.99e-250 purM 6.3.3.1 - F ko:K01933 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Phosphoribosylformylglycinamidine cyclo-ligase
LDIMBGKD_00620 0.0 purF 2.4.2.14 - F ko:K00764 ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000,ko01002 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
LDIMBGKD_00621 0.0 - - - L ko:K03502 - ko00000,ko03400 DNA-damage repair protein (DNA polymerase IV) K00961
LDIMBGKD_00622 1.77e-93 - - - - - - - -
LDIMBGKD_00623 7.88e-273 - - - S - - - 50S ribosome-binding GTPase
LDIMBGKD_00624 4.72e-128 - - - - - - - -
LDIMBGKD_00625 1.42e-114 - - - S ko:K07005 - ko00000 Pyridoxamine 5'-phosphate oxidase
LDIMBGKD_00626 6.05e-135 - - - K - - - sequence-specific DNA binding
LDIMBGKD_00628 8.09e-300 - - - - - - - -
LDIMBGKD_00629 1.8e-151 - - - - - - - -
LDIMBGKD_00630 4.6e-89 - - - - - - - -
LDIMBGKD_00631 4.07e-138 - - - - - - - -
LDIMBGKD_00632 1.3e-281 - - - S - - - Short C-terminal domain
LDIMBGKD_00633 0.0 purL 6.3.5.3 - F ko:K01952 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 CobB/CobQ-like glutamine amidotransferase domain
LDIMBGKD_00634 1.38e-175 purC 6.3.2.6 - F ko:K01923 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Belongs to the SAICAR synthetase family
LDIMBGKD_00635 1.62e-296 purT 2.1.2.2 - F ko:K08289 ko00230,ko00670,ko01100,ko01110,ko01130,map00230,map00670,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
LDIMBGKD_00636 1.97e-299 - - - M - - - Glycosyl transferase 4-like domain
LDIMBGKD_00637 1.88e-251 ltaE 4.1.2.48 - E ko:K01620 ko00260,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko01000 Beta-eliminating lyase
LDIMBGKD_00639 8.2e-81 rpsL - - J ko:K02950 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
LDIMBGKD_00640 1.34e-104 rpsG - - J ko:K02992 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
LDIMBGKD_00641 0.0 fusA - - J ko:K02355 - ko00000,ko03012,ko03029 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
LDIMBGKD_00642 2.25e-294 tuf - - J ko:K02358 - ko00000,ko03012,ko03029,ko04147 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
LDIMBGKD_00643 8.75e-157 - - - C - - - COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
LDIMBGKD_00644 9.31e-122 - - - - - - - -
LDIMBGKD_00645 7.02e-134 efp - - J ko:K02356 - ko00000,ko03012 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
LDIMBGKD_00646 1.34e-103 nusB - - K ko:K03625 - ko00000,ko03009,ko03021 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
LDIMBGKD_00647 1.11e-304 carA 6.3.5.5 - F ko:K01956 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the CarA family
LDIMBGKD_00648 0.0 carB 6.3.5.5 - EF ko:K01955 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Carbamoyl-phosphate synthetase large chain, oligomerisation domain
LDIMBGKD_00649 1.34e-230 pyrF 4.1.1.23 - F ko:K01591 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Essential for recycling GMP and indirectly, cGMP
LDIMBGKD_00650 6.35e-148 gmk 2.7.4.8 - F ko:K00942 ko00230,ko01100,map00230,map01100 ko00000,ko00001,ko00002,ko01000 Essential for recycling GMP and indirectly, cGMP
LDIMBGKD_00651 0.0 ilvD 4.2.1.9 - H ko:K01687 ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00770,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the IlvD Edd family
LDIMBGKD_00652 4.74e-60 rpoZ 2.7.7.6 - K ko:K03060 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
LDIMBGKD_00653 8.72e-279 metK 2.5.1.6 - H ko:K00789 ko00270,ko01100,ko01110,ko01230,map00270,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
LDIMBGKD_00654 0.0 cfa 2.1.1.79 - M ko:K00574 - ko00000,ko01000 Mycolic acid cyclopropane synthetase
LDIMBGKD_00655 0.0 priA - - L ko:K04066 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
LDIMBGKD_00656 1.06e-235 fmt 2.1.2.9 - J ko:K00604 ko00670,ko00970,map00670,map00970 ko00000,ko00001,ko01000 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
LDIMBGKD_00657 8.15e-110 serB 3.1.3.3 - E ko:K01079 ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko01009 haloacid dehalogenase-like hydrolase
LDIMBGKD_00658 2.4e-162 - - - S - - - SNARE associated Golgi protein
LDIMBGKD_00659 0.0 arc - - O ko:K13527 ko03050,map03050 ko00000,ko00001,ko00002,ko03051 AAA ATPase forming ring-shaped complexes
LDIMBGKD_00660 0.0 dop 3.5.1.119 - S ko:K20814 - ko00000,ko01000,ko03051 Pup-ligase protein
LDIMBGKD_00661 4.64e-220 - 3.1.3.25 - G ko:K01092 ko00521,ko00562,ko01100,ko04070,map00521,map00562,map01100,map04070 ko00000,ko00001,ko00002,ko01000 Inositol monophosphatase family
LDIMBGKD_00662 8.24e-41 pup - - S ko:K13570 - ko00000,ko04121 Protein modifier that is covalently attached to lysine residues of substrate proteins, thereby targeting them for proteasomal degradation. The tagging system is termed pupylation
LDIMBGKD_00663 0.0 pafA 6.3.1.19 - O ko:K13571 - ko00000,ko00002,ko01000,ko03051 Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine
LDIMBGKD_00664 4.7e-57 hup - - L ko:K03530 - ko00000,ko03032,ko03036,ko03400 Belongs to the bacterial histone-like protein family
LDIMBGKD_00665 0.0 - - - S - - - Lysylphosphatidylglycerol synthase TM region
LDIMBGKD_00666 0.0 purB 4.3.2.2 - F ko:K01756 ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Adenylosuccinate lyase C-terminal
LDIMBGKD_00667 0.0 - - - S - - - PGAP1-like protein
LDIMBGKD_00669 1.09e-125 - - - - - - - -
LDIMBGKD_00670 2.9e-229 - - - S ko:K07114 - ko00000,ko02000 von Willebrand factor (vWF) type A domain
LDIMBGKD_00671 1.13e-249 - - - S ko:K07114 - ko00000,ko02000 von Willebrand factor (vWF) type A domain
LDIMBGKD_00672 9.9e-116 - - - - - - - -
LDIMBGKD_00673 1.98e-231 - - - S - - - Protein of unknown function DUF58
LDIMBGKD_00674 2.09e-245 moxR - - S ko:K03924 - ko00000,ko01000 ATPase family associated with various cellular activities (AAA)
LDIMBGKD_00675 2.61e-179 ung 3.2.2.27 - L ko:K03648 ko03410,ko05340,map03410,map05340 ko00000,ko00001,ko01000,ko03400 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
LDIMBGKD_00676 1.36e-112 - - - S - - - LytR cell envelope-related transcriptional attenuator
LDIMBGKD_00677 4.22e-45 cspA - - K ko:K03704 - ko00000,ko03000 'Cold-shock' DNA-binding domain
LDIMBGKD_00678 0.0 groL - - O ko:K04077 ko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152 ko00000,ko00001,ko03019,ko03029,ko03110,ko04147 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
LDIMBGKD_00679 2.56e-56 - - - S - - - Proteins of 100 residues with WXG
LDIMBGKD_00680 1.78e-202 - - - - - - - -
LDIMBGKD_00681 4.23e-171 phoP - - KT ko:K02483 - ko00000,ko02022 Response regulator receiver domain protein
LDIMBGKD_00682 0.0 phoR 2.7.13.3 - T ko:K02484 - ko00000,ko01000,ko01001,ko02022 ATPase histidine kinase DNA gyrase B HSP90 domain protein
LDIMBGKD_00683 1.34e-102 cspB - - K ko:K03704 - ko00000,ko03000 'Cold-shock' DNA-binding domain
LDIMBGKD_00684 4.68e-264 - - - S - - - Protein of unknown function (DUF3027)
LDIMBGKD_00685 1.18e-175 - - - - - - - -
LDIMBGKD_00686 1.7e-234 uspA - - T - - - Belongs to the universal stress protein A family
LDIMBGKD_00687 0.0 clpC - - O ko:K03696 ko01100,map01100 ko00000,ko03110 ATPase family associated with various cellular activities (AAA)
LDIMBGKD_00688 0.0 aspS 6.1.1.12 - J ko:K01876 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
LDIMBGKD_00689 0.0 hisS 6.1.1.21 - J ko:K01892 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Histidyl-tRNA synthetase
LDIMBGKD_00690 1.31e-267 - - - S - - - Domain of Unknown Function (DUF349)
LDIMBGKD_00691 4.03e-189 - - - S ko:K06889 - ko00000 Serine aminopeptidase, S33
LDIMBGKD_00692 1.1e-182 gluA - - E ko:K10008 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ATP-binding protein of ABC transporter for glutamate K02028
LDIMBGKD_00693 1.51e-198 gluB - - ET ko:K10005 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Belongs to the bacterial solute-binding protein 3 family
LDIMBGKD_00694 2.23e-142 gluC - - E ko:K10006 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
LDIMBGKD_00695 1.1e-256 gluD - - E ko:K10007 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
LDIMBGKD_00696 1.25e-239 - - - S - - - Polyphosphate kinase 2 (PPK2)
LDIMBGKD_00697 0.0 - - - L - - - DEAD DEAH box helicase
LDIMBGKD_00698 0.0 rarA - - L ko:K07478 - ko00000 Recombination factor protein RarA
LDIMBGKD_00699 0.0 - - - EGP - - - Major Facilitator Superfamily
LDIMBGKD_00700 0.0 - 6.2.1.3 - I ko:K01897 ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920 ko00000,ko00001,ko00002,ko01000,ko01004,ko04147 AMP-binding enzyme
LDIMBGKD_00701 1.42e-180 - - - L - - - Transposase, Mutator family
LDIMBGKD_00703 0.0 - - - - - - - -
LDIMBGKD_00704 2.23e-184 - - - E - - - Psort location Cytoplasmic, score 8.87
LDIMBGKD_00705 1.42e-85 - - - S - - - Zincin-like metallopeptidase
LDIMBGKD_00706 1.17e-93 yccF - - S - - - Inner membrane component domain
LDIMBGKD_00707 5.32e-180 tenA 3.5.99.2 - K ko:K03707 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko01000,ko03000 Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
LDIMBGKD_00708 1.9e-62 - - - J ko:K07574 - ko00000,ko03009 CRS1_YhbY
LDIMBGKD_00709 2.09e-209 - - - S - - - Aldo/keto reductase family
LDIMBGKD_00710 0.0 - - - GP ko:K16785,ko:K16786,ko:K16787 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ABC transporter, ATP-binding protein
LDIMBGKD_00711 2.94e-85 - - - U - - - Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
LDIMBGKD_00712 9.57e-173 ppgK 2.7.1.2, 2.7.1.63 - GK ko:K00845,ko:K00886 ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 ROK family
LDIMBGKD_00713 2.37e-277 - - - E - - - Aminotransferase class I and II
LDIMBGKD_00714 4.46e-192 - - - P ko:K16784 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ATPases associated with a variety of cellular activities
LDIMBGKD_00715 0.0 - - - M - - - 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
LDIMBGKD_00716 0.0 - - - S - - - Tetratricopeptide repeat
LDIMBGKD_00717 0.0 ligA 6.5.1.2 - L ko:K01972 ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430 ko00000,ko00001,ko01000,ko03032,ko03400 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
LDIMBGKD_00718 5.3e-263 mrp - - D ko:K03593 - ko00000,ko03029,ko03036 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP
LDIMBGKD_00719 9.99e-143 ykoE - - S ko:K16925 - ko00000,ko00002,ko02000 ABC-type cobalt transport system, permease component
LDIMBGKD_00721 1.22e-199 - - - H - - - Adenine-specific methyltransferase EcoRI
LDIMBGKD_00722 4.23e-104 - 2.7.11.1 - KLT ko:K12132 - ko00000,ko01000,ko01001 Protein tyrosine kinase
LDIMBGKD_00723 5.15e-40 - - - - - - - -
LDIMBGKD_00724 0.0 - - - V - - - Type III restriction enzyme res subunit
LDIMBGKD_00725 0.0 - - - KL - - - Type III restriction enzyme res subunit
LDIMBGKD_00726 1.57e-314 - - - - - - - -
LDIMBGKD_00727 2.25e-283 - - - K - - - DNA binding
LDIMBGKD_00728 0.0 - - - L - - - SNF2 family N-terminal domain
LDIMBGKD_00729 0.0 - - - S - - - Protein of unknown function DUF262
LDIMBGKD_00730 5.21e-93 - - - - - - - -
LDIMBGKD_00731 2.27e-49 - - - - - - - -
LDIMBGKD_00732 0.0 glnA 6.3.1.2 - E ko:K01915 ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727 ko00000,ko00001,ko01000,ko04147 glutamine synthetase
LDIMBGKD_00733 1.11e-157 - - - S - - - Domain of unknown function (DUF4191)
LDIMBGKD_00734 0.0 lpdA 1.8.1.4 - C ko:K00382 ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200 br01601,ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
LDIMBGKD_00735 6.92e-134 - - - S - - - Protein of unknown function (DUF3043)
LDIMBGKD_00736 0.0 argE - - E - - - Peptidase dimerisation domain
LDIMBGKD_00737 7.53e-272 - - - T - - - Histidine kinase
LDIMBGKD_00738 1.03e-55 - - - - - - - -
LDIMBGKD_00739 7.24e-204 - - - V - - - N-Acetylmuramoyl-L-alanine amidase
LDIMBGKD_00740 8.2e-285 ytrE - - V ko:K02003,ko:K10038 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 lipoprotein transporter activity
LDIMBGKD_00741 1.08e-138 ykoE - - S ko:K16925 - ko00000,ko00002,ko02000 ABC-type cobalt transport system, permease component
LDIMBGKD_00742 0.0 ykoD - - P ko:K16785,ko:K16786,ko:K16787 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ATPases associated with a variety of cellular activities
LDIMBGKD_00743 3.03e-169 - - - V ko:K02003 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
LDIMBGKD_00744 8.29e-29 - - - V ko:K02004 - ko00000,ko00002,ko02000 FtsX-like permease family
LDIMBGKD_00745 1.57e-219 - - - V ko:K02004 - ko00000,ko00002,ko02000 FtsX-like permease family
LDIMBGKD_00746 1.8e-18 - - - V ko:K02004 - ko00000,ko00002,ko02000 FtsX-like permease family
LDIMBGKD_00747 2.32e-215 tsnR - - J ko:K03437 - ko00000,ko03016 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
LDIMBGKD_00748 3.65e-251 pheS 6.1.1.20 - J ko:K01889 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
LDIMBGKD_00749 0.0 pheT 6.1.1.20 - J ko:K01890 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Phenylalanyl-tRNA synthetase beta
LDIMBGKD_00750 5.69e-190 - - - - - - - -
LDIMBGKD_00751 3.86e-259 argC 1.2.1.38 - E ko:K00145 ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
LDIMBGKD_00752 7.16e-278 argJ 2.3.1.1, 2.3.1.35 - E ko:K00620 ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
LDIMBGKD_00753 5.02e-228 argB 2.7.2.8 - E ko:K00930 ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the acetylglutamate kinase family. ArgB subfamily
LDIMBGKD_00754 2.17e-304 argD 2.6.1.11, 2.6.1.17 - E ko:K00821 ko00220,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00220,map00300,map01100,map01110,map01120,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Aminotransferase class-III
LDIMBGKD_00755 5.7e-235 argF 2.1.3.3 - E ko:K00611 ko00220,ko01100,ko01110,ko01130,ko01230,map00220,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
LDIMBGKD_00756 1.23e-119 argR - - K ko:K03402 - ko00000,ko03000 Regulates arginine biosynthesis genes
LDIMBGKD_00757 4.9e-303 argG 6.3.4.5 - E ko:K01940 ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,ko05418,map00220,map00250,map01100,map01110,map01130,map01230,map05418 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the argininosuccinate synthase family. Type 1 subfamily
LDIMBGKD_00758 0.0 argH 4.3.2.1 - E ko:K01755 ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,map00220,map00250,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000,ko04147 argininosuccinate lyase
LDIMBGKD_00759 2.15e-198 butA 1.1.1.100, 1.1.1.304, 1.1.1.76 - IQ ko:K00059,ko:K03366 ko00061,ko00333,ko00650,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00650,map00780,map01040,map01100,map01130,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 Enoyl-(Acyl carrier protein) reductase
LDIMBGKD_00760 3.62e-116 - - - S ko:K06950 - ko00000 Metal dependent phosphohydrolases with conserved 'HD' motif.
LDIMBGKD_00761 0.0 tyrS 6.1.1.1 - J ko:K01866 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
LDIMBGKD_00763 1.07e-91 - - - L - - - Tetratricopeptide repeat
LDIMBGKD_00764 4.09e-248 - - - G - - - Haloacid dehalogenase-like hydrolase
LDIMBGKD_00765 1.91e-155 tlyA 2.1.1.226, 2.1.1.227 - J ko:K06442 - ko00000,ko01000,ko03009 Ribosomal RNA large subunit methyltransferase J
LDIMBGKD_00766 0.0 trkH - - P ko:K03498 - ko00000,ko02000 Cation transport protein
LDIMBGKD_00767 9.59e-152 trkA - - P ko:K03499 - ko00000,ko02000 TrkA-N domain
LDIMBGKD_00768 1.45e-234 nadK 2.7.1.23 - H ko:K00858 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko01000 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
LDIMBGKD_00769 0.0 recN - - L ko:K03631 - ko00000,ko03400 May be involved in recombinational repair of damaged DNA
LDIMBGKD_00770 3.85e-166 - - - S - - - Haloacid dehalogenase-like hydrolase
LDIMBGKD_00771 0.0 thrC 4.2.3.1 - E ko:K01733 ko00260,ko00750,ko01100,ko01110,ko01120,ko01230,map00260,map00750,map01100,map01110,map01120,map01230 ko00000,ko00001,ko00002,ko01000 Threonine synthase N terminus
LDIMBGKD_00772 4.6e-307 proA 1.2.1.41 - E ko:K00147 ko00330,ko00332,ko01100,ko01110,ko01130,ko01230,map00330,map00332,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
LDIMBGKD_00773 1.03e-147 - - - - - - - -
LDIMBGKD_00774 1.72e-163 nadD 2.7.7.18 - H ko:K00969 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
LDIMBGKD_00775 2.27e-246 prs 2.7.6.1 - F ko:K00948 ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
LDIMBGKD_00777 5.33e-162 glmU 2.3.1.157, 2.7.7.23 - M ko:K04042 ko00520,ko01100,ko01130,map00520,map01100,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
LDIMBGKD_00778 3.61e-148 glmU 2.3.1.157, 2.7.7.23 - M ko:K04042 ko00520,ko01100,ko01130,map00520,map01100,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
LDIMBGKD_00779 4.35e-94 rsfS - - J ko:K09710 - ko00000,ko03009 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
LDIMBGKD_00780 1.7e-156 gpmB 3.1.3.85, 5.4.2.11 - G ko:K01834,ko:K22306 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Phosphoglycerate mutase family
LDIMBGKD_00781 5.28e-133 - - - - - - - -
LDIMBGKD_00784 9.97e-94 pdxH - - S ko:K07006 - ko00000 Pfam:Pyridox_oxidase
LDIMBGKD_00785 1.72e-206 gpmB 3.1.3.85, 5.4.2.11 - G ko:K01834,ko:K22306 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Phosphoglycerate mutase family
LDIMBGKD_00786 5.76e-217 corA - - P ko:K03284 - ko00000,ko02000 CorA-like Mg2+ transporter protein
LDIMBGKD_00787 5.23e-213 - - - ET ko:K10005 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Bacterial periplasmic substrate-binding proteins
LDIMBGKD_00788 0.0 leuS 6.1.1.4 - J ko:K01869 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Belongs to the class-I aminoacyl-tRNA synthetase family
LDIMBGKD_00789 2.36e-171 comEA - - L ko:K02237 - ko00000,ko00002,ko02044 Helix-hairpin-helix motif
LDIMBGKD_00790 0.0 comEC - - S ko:K02238 - ko00000,ko00002,ko02044 Competence protein
LDIMBGKD_00791 4.05e-238 holA 2.7.7.7 - L ko:K02340 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase III delta subunit
LDIMBGKD_00792 4.34e-145 tsaE - - S ko:K06925 - ko00000,ko03016 Threonylcarbamoyl adenosine biosynthesis protein TsaE
LDIMBGKD_00793 5.94e-201 yeaZ - - O ko:K14742 - ko00000,ko03016 Glycoprotease family
LDIMBGKD_00794 3.49e-118 rimI 2.3.1.128 - K ko:K03789 - ko00000,ko01000,ko03009 FR47-like protein
LDIMBGKD_00795 7.97e-251 tsaD 2.3.1.234 - O ko:K01409 - ko00000,ko01000,ko03016 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
LDIMBGKD_00797 1.79e-117 - - - - - - - -
LDIMBGKD_00799 1.16e-81 - - - - - - - -
LDIMBGKD_00800 4.62e-137 - - - M - - - Peptidase family M23
LDIMBGKD_00801 4.03e-87 - - - G - - - ABC transporter substrate-binding protein
LDIMBGKD_00802 9.43e-236 - - - G - - - ABC transporter substrate-binding protein
LDIMBGKD_00803 2e-304 icd 1.1.1.42 - C ko:K00031 ko00020,ko00480,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,ko04146,map00020,map00480,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230,map04146 br01601,ko00000,ko00001,ko00002,ko01000 Belongs to the isocitrate and isopropylmalate dehydrogenases family
LDIMBGKD_00804 8.5e-266 guaB3 1.1.1.205 - F ko:K00088 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko04147 IMP dehydrogenase family protein
LDIMBGKD_00806 0.0 fadD3 6.2.1.3 - I ko:K01897 ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920 ko00000,ko00001,ko00002,ko01000,ko01004,ko04147 long-chain-fatty acid CoA ligase
LDIMBGKD_00807 5.55e-111 def 3.5.1.88 - J ko:K01462 - ko00000,ko01000 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
LDIMBGKD_00808 1.03e-208 rpsB - - J ko:K02967 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the universal ribosomal protein uS2 family
LDIMBGKD_00809 2.5e-177 tsf - - J ko:K02357 - ko00000,ko03012,ko03029 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
LDIMBGKD_00810 5.41e-172 pyrH 2.7.4.22 - F ko:K09903 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko01000 Catalyzes the reversible phosphorylation of UMP to UDP
LDIMBGKD_00811 2.34e-119 frr - - J ko:K02838 - ko00000,ko03012 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
LDIMBGKD_00812 3.23e-225 cdsA 2.7.7.41 - I ko:K00981 ko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070 ko00000,ko00001,ko00002,ko01000 Cytidylyltransferase family
LDIMBGKD_00813 3.81e-294 rlmN 2.1.1.192 - J ko:K06941 - ko00000,ko01000,ko03009 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs
LDIMBGKD_00814 3.54e-149 - - - V ko:K01990 - ko00000,ko00002,ko02000 ATPases associated with a variety of cellular activities
LDIMBGKD_00815 4.44e-173 - - - S ko:K01992 - ko00000,ko00002,ko02000 ABC-2 type transporter
LDIMBGKD_00816 2.11e-178 hisF 4.1.3.27 - E ko:K01657,ko:K02500 ko00340,ko00400,ko00405,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00340,map00400,map00405,map01100,map01110,map01130,map01230,map02024,map02025 ko00000,ko00001,ko00002,ko01000 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
LDIMBGKD_00817 1.57e-98 hisI 3.5.4.19, 3.6.1.31 - E ko:K01496,ko:K11755 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
LDIMBGKD_00818 0.0 trpE 4.1.3.27 - E ko:K01657 ko00400,ko00405,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00400,map00405,map01100,map01110,map01130,map01230,map02024,map02025 ko00000,ko00001,ko00002,ko01000 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
LDIMBGKD_00819 8.51e-146 - - - L - - - Uracil DNA glycosylase superfamily
LDIMBGKD_00820 8.33e-07 - - - - - - - -
LDIMBGKD_00821 1.89e-119 - - - G - - - Trehalose utilisation
LDIMBGKD_00823 0.00074 - - - - - - - -
LDIMBGKD_00824 0.0 trpB 4.2.1.20 - E ko:K01696 ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
LDIMBGKD_00825 3.55e-206 trpA 4.2.1.20 - E ko:K01695 ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
LDIMBGKD_00826 7.93e-234 lgt - - M - - - Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
LDIMBGKD_00827 2.21e-156 rpe 5.1.3.1 - G ko:K01783 ko00030,ko00040,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Ribulose-phosphate 3-epimerase
LDIMBGKD_00828 3.18e-55 hisE 3.6.1.31 - E ko:K01523 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Phosphoribosyl-ATP pyrophosphohydrolase
LDIMBGKD_00829 5.79e-201 hisG 2.4.2.17 - F ko:K00765,ko:K02502 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 ATP phosphoribosyltransferase
LDIMBGKD_00830 4.93e-141 pgsA2 2.7.8.41, 2.7.8.5 - I ko:K00995,ko:K08744 ko00564,ko01100,map00564,map01100 ko00000,ko00001,ko01000 Belongs to the CDP-alcohol phosphatidyltransferase class-I family
LDIMBGKD_00831 1.6e-223 - - - S - - - Bacterial protein of unknown function (DUF881)
LDIMBGKD_00832 1.09e-63 sbp - - S - - - Protein of unknown function (DUF1290)
LDIMBGKD_00833 3e-196 - - - S - - - Bacterial protein of unknown function (DUF881)
LDIMBGKD_00834 2.66e-97 garA - - T - - - Inner membrane component of T3SS, cytoplasmic domain
LDIMBGKD_00835 2.48e-170 merR2 - - K - - - helix_turn_helix, mercury resistance
LDIMBGKD_00836 2.44e-89 - - - - - - - -
LDIMBGKD_00837 3.58e-85 crcB - - D ko:K06199 - ko00000,ko02000 Important for reducing fluoride concentration in the cell, thus reducing its toxicity
LDIMBGKD_00838 3.26e-84 - - - D ko:K06199 - ko00000,ko02000 Important for reducing fluoride concentration in the cell, thus reducing its toxicity
LDIMBGKD_00839 1.51e-178 nt5e 3.1.3.18 - S ko:K01091 ko00630,ko01100,ko01110,ko01130,map00630,map01100,map01110,map01130 ko00000,ko00001,ko01000 HAD-hyrolase-like
LDIMBGKD_00840 5.49e-82 rbpA - - K - - - Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters
LDIMBGKD_00841 0.0 helY - - L ko:K03727 - ko00000,ko01000 DEAD DEAH box helicase
LDIMBGKD_00842 2.35e-67 - - - - - - - -
LDIMBGKD_00843 0.0 - - - K - - - WYL domain
LDIMBGKD_00844 0.0 ugp 2.7.7.9 - G ko:K00963 ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130 ko00000,ko00001,ko00002,ko01000 UTP-glucose-1-phosphate uridylyltransferase
LDIMBGKD_00847 6.43e-127 - - - V - - - site-specific DNA-methyltransferase (adenine-specific) activity
LDIMBGKD_00848 5.76e-291 tnpA - - L - - - Transposase
LDIMBGKD_00850 0.0 der - - F ko:K03977 - ko00000,ko03009 GTPase that plays an essential role in the late steps of ribosome biogenesis
LDIMBGKD_00851 7.04e-186 rluB 5.4.99.19, 5.4.99.22 - J ko:K06178,ko:K06183 - ko00000,ko01000,ko03009 Belongs to the pseudouridine synthase RsuA family
LDIMBGKD_00852 1.15e-219 - - - U ko:K06188 - ko00000,ko02000 Belongs to the MIP aquaporin (TC 1.A.8) family
LDIMBGKD_00853 5.52e-37 - - - - - - - -
LDIMBGKD_00854 0.0 purH 2.1.2.3, 3.5.4.10 - F ko:K00602 ko00230,ko00670,ko01100,ko01110,ko01130,ko01523,map00230,map00670,map01100,map01110,map01130,map01523 ko00000,ko00001,ko00002,ko01000,ko04147 Bifunctional purine biosynthesis protein PurH
LDIMBGKD_00855 0.0 - - - - - - - -
LDIMBGKD_00856 2.16e-211 sucD 6.2.1.5 - C ko:K01902 ko00020,ko00640,ko00660,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00640,map00660,map00720,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
LDIMBGKD_00857 7.79e-281 sucC 6.2.1.5 - F ko:K01903 ko00020,ko00640,ko00660,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00640,map00660,map00720,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit
LDIMBGKD_00858 1.8e-132 apt 2.4.2.7 - F ko:K00759 ko00230,ko01100,map00230,map01100 ko00000,ko00001,ko01000,ko04147 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
LDIMBGKD_00859 1.9e-72 yajC - - U ko:K03210 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Preprotein translocase subunit
LDIMBGKD_00860 1.2e-260 ruvB 3.6.4.12 - L ko:K03551 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
LDIMBGKD_00861 2.41e-55 ruvA 3.6.4.12 - L ko:K03550 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
LDIMBGKD_00862 6.75e-132 ruvC 3.1.22.4 - L ko:K01159 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
LDIMBGKD_00863 6.09e-175 yebC - - K - - - transcriptional regulatory protein
LDIMBGKD_00864 1.56e-239 pimA 2.4.1.345 GT4 M ko:K08256 - ko00000,ko01000,ko01003 Glycosyl transferases group 1
LDIMBGKD_00865 4.4e-247 htrB 2.3.1.265 - M ko:K22311 - ko00000,ko01000 Bacterial lipid A biosynthesis acyltransferase
LDIMBGKD_00866 8.83e-151 pgsA1 2.7.8.11, 2.7.8.5 - I ko:K00995,ko:K00999 ko00562,ko00564,ko01100,ko04070,map00562,map00564,map01100,map04070 ko00000,ko00001,ko01000 CDP-alcohol phosphatidyltransferase
LDIMBGKD_00867 0.0 thrS 6.1.1.3 - J ko:K01868 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
LDIMBGKD_00868 3.74e-127 - - - S - - - ATPases associated with a variety of cellular activities
LDIMBGKD_00870 2.03e-120 - 2.3.1.57 - K ko:K22441 - ko00000,ko01000 Acetyltransferase (GNAT) domain
LDIMBGKD_00871 2.65e-32 - - - - - - - -
LDIMBGKD_00877 4.49e-199 - - - S - - - PAC2 family
LDIMBGKD_00878 1.67e-191 uppP 3.6.1.27 - V ko:K06153 ko00550,map00550 ko00000,ko00001,ko01000,ko01011 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
LDIMBGKD_00879 2.17e-204 - - - G - - - Fructosamine kinase
LDIMBGKD_00880 2.49e-279 dnaJ - - O ko:K03686 - ko00000,ko03029,ko03110 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
LDIMBGKD_00881 1.14e-255 hrcA - - K ko:K03705 - ko00000,ko03000 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
LDIMBGKD_00882 0.0 tkt 2.2.1.1 - H ko:K00615 ko00030,ko00710,ko01051,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01051,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the transketolase family
LDIMBGKD_00883 9.8e-258 tal 2.2.1.2 - H ko:K00616 ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
LDIMBGKD_00884 2.48e-94 - - - S - - - PFAM Pentapeptide repeats (8 copies)
LDIMBGKD_00885 2.37e-292 - 2.6.1.1, 2.6.1.2, 2.6.1.66 - E ko:K00812,ko:K00841,ko:K08969,ko:K10907,ko:K14260 ko00220,ko00250,ko00270,ko00290,ko00300,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00290,map00300,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Aminotransferase class I and II
LDIMBGKD_00886 1.01e-117 - - - K - - - helix_turn_helix ASNC type
LDIMBGKD_00887 0.0 aspC 2.6.1.1, 2.6.1.2, 2.6.1.66 - E ko:K00812,ko:K08969,ko:K10907,ko:K14260 ko00220,ko00250,ko00270,ko00290,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00290,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Aminotransferase, class I II
LDIMBGKD_00888 7.54e-207 - - - S - - - Sucrose-6F-phosphate phosphohydrolase
LDIMBGKD_00889 2.87e-43 secG - - U ko:K03075 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Preprotein translocase SecG subunit
LDIMBGKD_00890 2.06e-194 tpiA 5.3.1.1 - G ko:K01803 ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko04147 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
LDIMBGKD_00891 2.34e-284 pgk 2.7.2.3, 5.3.1.1 - F ko:K00927,ko:K01803 ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko04147 Phosphoglycerate kinase
LDIMBGKD_00892 6.29e-223 whiA - - K ko:K09762 - ko00000 May be required for sporulation
LDIMBGKD_00893 1.72e-224 yvcJ - - S ko:K06958 - ko00000,ko03019 Displays ATPase and GTPase activities
LDIMBGKD_00894 7.39e-225 aroE 1.1.1.25 - E ko:K00014 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Shikimate dehydrogenase substrate binding domain
LDIMBGKD_00895 0.0 uvrC - - L ko:K03703 ko03420,map03420 ko00000,ko00001,ko03400 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
LDIMBGKD_00896 0.0 uvrA - - L ko:K03701 ko03420,map03420 ko00000,ko00001,ko03400 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
LDIMBGKD_00897 2.31e-230 - - - - - - - -
LDIMBGKD_00898 1.83e-126 nnrE - - L - - - Uracil DNA glycosylase superfamily
LDIMBGKD_00899 5.53e-157 - - - S ko:K06999 - ko00000 Phospholipase/Carboxylesterase
LDIMBGKD_00900 0.0 ybiT - - S ko:K06158 - ko00000,ko03012 ABC transporter
LDIMBGKD_00901 1.8e-247 - - - P - - - Cation efflux family
LDIMBGKD_00902 1.78e-186 - 4.1.1.44 - S ko:K01607 ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220 ko00000,ko00001,ko01000 Carboxymuconolactone decarboxylase family
LDIMBGKD_00903 2.09e-236 cbh 3.5.1.24 - M ko:K01442 ko00120,ko00121,ko01100,map00120,map00121,map01100 ko00000,ko00001,ko01000 Linear amide C-N hydrolase, choloylglycine hydrolase family protein
LDIMBGKD_00904 0.0 nnrD 4.2.1.136, 5.1.99.6 - H ko:K17758,ko:K17759 - ko00000,ko01000 Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
LDIMBGKD_00905 5e-140 ahpC 1.11.1.15 - O ko:K03386 ko04214,map04214 ko00000,ko00001,ko01000,ko04147 C-terminal domain of 1-Cys peroxiredoxin
LDIMBGKD_00906 0.0 - 1.8.1.9 - C ko:K00384 ko00450,map00450 ko00000,ko00001,ko01000 Thioredoxin domain
LDIMBGKD_00907 2.12e-222 - - - K - - - Bacterial regulatory helix-turn-helix protein, lysR family
LDIMBGKD_00908 5.22e-158 - 3.8.1.2 - S ko:K01560 ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120 ko00000,ko00001,ko01000 Haloacid dehalogenase-like hydrolase
LDIMBGKD_00909 7.11e-243 - - - S - - - Protein conserved in bacteria
LDIMBGKD_00910 7.98e-231 - - - O - - - ADP-ribosylglycohydrolase
LDIMBGKD_00911 1.2e-76 - - - K - - - HxlR-like helix-turn-helix
LDIMBGKD_00912 1.25e-66 - - - L - - - NUDIX domain
LDIMBGKD_00913 6.8e-104 ypeA 2.3.1.1 - K ko:K22477 ko00220,ko01210,ko01230,map00220,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score 8.87
LDIMBGKD_00914 5.35e-160 pyrE 2.4.2.10 - F ko:K00762 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
LDIMBGKD_00915 8.93e-241 pyrD 1.3.1.14 - F ko:K17828 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
LDIMBGKD_00916 3.32e-202 pyrK - - C ko:K02823 ko00240,ko01100,map00240,map01100 ko00000,ko00001 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B
LDIMBGKD_00917 1.68e-225 pyrF 4.1.1.23 - F ko:K01591 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the OMP decarboxylase family. Type 2 subfamily
LDIMBGKD_00918 0.0 pyrC 3.5.2.3 - F ko:K01465 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
LDIMBGKD_00919 1.83e-96 pyrI - - F ko:K00610 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002 Aspartate carbamoyltransferase regulatory chain, allosteric domain protein
LDIMBGKD_00920 6.91e-242 pyrB 2.1.3.2 - F ko:K00609 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the ATCase OTCase family
LDIMBGKD_00921 1.09e-114 - - - S - - - Domain of unknown function (DUF4186)
LDIMBGKD_00922 0.0 glnE 2.7.7.42, 2.7.7.89 - H ko:K00982 - ko00000,ko01000 Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell
LDIMBGKD_00923 6.6e-206 metF 1.5.1.20 - E ko:K00297 ko00670,ko00720,ko01100,ko01120,ko01200,ko01523,map00670,map00720,map01100,map01120,map01200,map01523 ko00000,ko00001,ko00002,ko01000 Methylenetetrahydrofolate reductase
LDIMBGKD_00924 0.0 metE 2.1.1.14 - E ko:K00549 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
LDIMBGKD_00925 3.07e-127 sixA - - T ko:K08296 - ko00000,ko01000 Phosphoglycerate mutase family
LDIMBGKD_00926 2.48e-252 trmI 2.1.1.219, 2.1.1.220 - J ko:K07442 - ko00000,ko01000,ko03016 Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
LDIMBGKD_00927 2.85e-203 ylmA 3.6.3.34 - P ko:K02013 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ATPases associated with a variety of cellular activities
LDIMBGKD_00928 2.02e-311 glgA 2.4.1.342 GT4 G ko:K16148 ko00500,ko01100,map00500,map01100 ko00000,ko00001,ko01000,ko01003 Starch synthase catalytic domain
LDIMBGKD_00929 4.8e-114 bcp 1.11.1.15 - O ko:K03564 - ko00000,ko01000 Redoxin
LDIMBGKD_00930 1.11e-103 - - - - - - - -
LDIMBGKD_00931 0.0 gltD 1.4.1.13, 1.4.1.14 - C ko:K00266 ko00250,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00250,map00910,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko01000 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
LDIMBGKD_00932 0.0 gltB 1.4.1.13, 1.4.1.14, 1.4.7.1 - E ko:K00265,ko:K00284 ko00250,ko00630,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00250,map00630,map00910,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko01000 glutamate synthase NADPH large subunit
LDIMBGKD_00933 0.0 hemN - - H - - - Involved in the biosynthesis of porphyrin-containing compound
LDIMBGKD_00934 0.0 lepA - - M ko:K03596 ko05134,map05134 ko00000,ko00001 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
LDIMBGKD_00935 1.36e-46 rpsT - - J ko:K02968 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds directly to 16S ribosomal RNA
LDIMBGKD_00936 7.09e-179 - - - S - - - UPF0126 domain
LDIMBGKD_00937 8.73e-289 ilvE 2.6.1.42 - E ko:K00826 ko00270,ko00280,ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00270,map00280,map00290,map00770,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Amino-transferase class IV
LDIMBGKD_00938 2.59e-138 ctc - - J ko:K02897 ko03010,map03010 ko00000,ko00001,ko00002,ko03011 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
LDIMBGKD_00939 1.03e-248 - - - S ko:K06889 - ko00000 alpha beta
LDIMBGKD_00940 0.0 pntB 1.6.1.2 - C ko:K00325 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko01000 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
LDIMBGKD_00941 4.73e-62 pntAB 1.6.1.2 - C ko:K00324 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko01000 4TM region of pyridine nucleotide transhydrogenase, mitoch
LDIMBGKD_00942 2.51e-258 pntA 1.6.1.2 - C ko:K00324 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko01000 NAD(P) transhydrogenase subunit alpha part 1 K00324
LDIMBGKD_00943 0.0 fadD2 6.2.1.3 - I ko:K01897 ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920 ko00000,ko00001,ko00002,ko01000,ko01004,ko04147 AMP-binding enzyme
LDIMBGKD_00944 9.98e-231 era - - S ko:K03595 - ko00000,ko03009,ko03029 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
LDIMBGKD_00945 1.8e-316 corC - - S - - - CBS domain
LDIMBGKD_00946 1.5e-134 ybeY - - S ko:K07042 - ko00000,ko03009 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
LDIMBGKD_00947 4.27e-273 phoH - - T ko:K06217 - ko00000 PhoH-like protein
LDIMBGKD_00948 2.19e-77 hit - - FG ko:K02503 - ko00000,ko04147 Scavenger mRNA decapping enzyme C-term binding
LDIMBGKD_00949 7.71e-185 - 2.1.1.193 - J ko:K09761 - ko00000,ko01000,ko03009 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
LDIMBGKD_00951 7.88e-211 spoU2 - - J - - - SpoU rRNA Methylase family
LDIMBGKD_00952 9.8e-171 tnp3503b - - L - - - Transposase and inactivated derivatives
LDIMBGKD_00953 6.98e-284 glgC 2.7.7.27 - H ko:K00975 ko00500,ko00520,ko01100,ko01110,ko02026,map00500,map00520,map01100,map01110,map02026 ko00000,ko00001,ko00002,ko01000 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
LDIMBGKD_00954 4.81e-120 - - - S - - - Iron-sulfur cluster assembly protein
LDIMBGKD_00955 3.17e-135 iscU - - C ko:K04488 - ko00000 SUF system FeS assembly protein, NifU family
LDIMBGKD_00956 2.17e-305 sufS 2.8.1.7, 4.4.1.16 - E ko:K11717 ko00450,ko01100,map00450,map01100 ko00000,ko00001,ko01000 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
LDIMBGKD_00957 8.04e-184 sufC - - O ko:K09013 - ko00000,ko02000 FeS assembly ATPase SufC
LDIMBGKD_00958 6.63e-299 sufD - - O ko:K09015 - ko00000 FeS assembly protein SufD
LDIMBGKD_00959 0.0 sufB - - O ko:K09014 - ko00000 FeS assembly protein SufB
LDIMBGKD_00960 0.0 - - - S - - - L,D-transpeptidase catalytic domain
LDIMBGKD_00961 0.0 pyrG 6.3.4.2 - F ko:K01937 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
LDIMBGKD_00962 6.66e-65 - 3.2.1.1, 3.2.1.41 CBM48,GH13 M ko:K01176,ko:K01200 ko00500,ko01100,ko01110,ko04973,map00500,map01100,map01110,map04973 ko00000,ko00001,ko01000 Aamy_C
LDIMBGKD_00963 8.02e-181 pulA 3.2.1.41, 3.2.1.68 CBM48,GH13 G ko:K01200,ko:K01214 ko00500,ko01100,ko01110,map00500,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Belongs to the glycosyl hydrolase 13 family
LDIMBGKD_00964 2.25e-109 - 3.2.1.1, 3.2.1.41 CBM48,GH13 M ko:K01176,ko:K01200 ko00500,ko01100,ko01110,ko04973,map00500,map01100,map01110,map04973 ko00000,ko00001,ko01000 Aamy_C
LDIMBGKD_00965 1.29e-123 - 3.2.1.1, 3.2.1.41 CBM48,GH13 G ko:K01176,ko:K01200 ko00500,ko01100,ko01110,ko04973,map00500,map01100,map01110,map04973 ko00000,ko00001,ko01000 Alpha amylase, catalytic domain
LDIMBGKD_00967 1.32e-53 aroQ 4.2.1.10 - E ko:K03786 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes a trans-dehydration via an enolate intermediate
LDIMBGKD_00968 1.19e-24 aroQ 4.2.1.10 - E ko:K03786 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes a trans-dehydration via an enolate intermediate
LDIMBGKD_00969 0.0 aroB 2.7.1.71, 4.2.3.4 - H ko:K01735,ko:K13829 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
LDIMBGKD_00970 1.39e-278 aroC 4.2.3.5 - E ko:K01736 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
LDIMBGKD_00972 2.13e-264 mltG - - S ko:K07082 - ko00000 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
LDIMBGKD_00973 3.11e-111 ruvX - - L ko:K07447 - ko00000,ko01000 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
LDIMBGKD_00974 0.0 alaS 6.1.1.7 - J ko:K01872 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
LDIMBGKD_00975 6.54e-46 - - - - - - - -
LDIMBGKD_00976 1.08e-83 - - - S - - - Bacterial protein of unknown function (DUF948)
LDIMBGKD_00977 7.34e-165 - 5.4.2.12 - G ko:K15634 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Phosphoglycerate mutase family
LDIMBGKD_00978 2.04e-74 - - - S ko:K08972 - ko00000 Mycobacterial 4 TMS phage holin, superfamily IV
LDIMBGKD_00979 3.61e-141 rpsD - - J ko:K02986 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
LDIMBGKD_00980 0.0 pcrA 3.6.4.12 - L ko:K03657 ko03420,ko03430,map03420,map03430 ko00000,ko00001,ko01000,ko03400 DNA helicase
LDIMBGKD_00981 8.71e-119 xpt 2.4.2.22 - F ko:K03816 ko00230,ko01100,ko01110,map00230,map01100,map01110 ko00000,ko00001,ko01000 Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
LDIMBGKD_00982 0.0 pbuX - - F ko:K03458 - ko00000 Permease family
LDIMBGKD_00983 1.5e-151 - - - M - - - Protein of unknown function (DUF3737)
LDIMBGKD_00984 6.73e-26 - 4.4.1.8 - E ko:K14155 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 ko00000,ko00001,ko01000,ko01007 Aminotransferase, class I II
LDIMBGKD_00985 5.89e-224 - 4.4.1.8 - E ko:K14155 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 ko00000,ko00001,ko01000,ko01007 Aminotransferase, class I II
LDIMBGKD_00986 5.4e-239 - - - K - - - TRANSCRIPTIONal
LDIMBGKD_00987 0.0 - 3.2.1.1 GH13 G ko:K01176 ko00500,ko01100,ko04973,map00500,map01100,map04973 ko00000,ko00001,ko01000 Glycosyl hydrolase family 70
LDIMBGKD_00988 2.07e-179 - - - S ko:K07010 - ko00000,ko01002 Peptidase C26
LDIMBGKD_00989 1.1e-108 - - - S ko:K19055 - ko00000,ko01000,ko03016 Aminoacyl-tRNA editing domain
LDIMBGKD_00990 2.12e-130 - - - S - - - ABC-2 family transporter protein
LDIMBGKD_00991 7.58e-160 - - - V ko:K01990 - ko00000,ko00002,ko02000 ATPases associated with a variety of cellular activities
LDIMBGKD_00992 1.42e-86 - - - K ko:K07979 - ko00000,ko03000 helix_turn_helix gluconate operon transcriptional repressor
LDIMBGKD_00993 2.04e-241 - - - K - - - Helix-turn-helix XRE-family like proteins
LDIMBGKD_00994 1.62e-215 add1 3.5.4.4 - F ko:K01488 ko00230,ko01100,ko05340,map00230,map01100,map05340 ko00000,ko00001,ko01000 Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
LDIMBGKD_00995 3.44e-182 - - - - - - - -
LDIMBGKD_00996 6.89e-65 - 4.2.99.21 - E ko:K04782 ko01053,ko01110,ko01130,map01053,map01110,map01130 ko00000,ko00001,ko01000 Chorismate mutase type II
LDIMBGKD_00997 3.32e-97 - - - E - - - -acetyltransferase
LDIMBGKD_00998 1.82e-93 - - - K - - - Acetyltransferase (GNAT) family
LDIMBGKD_00999 8.69e-140 - - - F - - - adenylate kinase activity
LDIMBGKD_01000 8.85e-85 - - - S ko:K07133 - ko00000 AAA domain
LDIMBGKD_01001 0.0 tetM - - J ko:K18220 - br01600,ko00000,ko01504 elongation factor G
LDIMBGKD_01002 3.42e-201 - - - L ko:K07481 - ko00000 Transposase domain (DUF772)
LDIMBGKD_01003 2.9e-91 - - - K - - - sequence-specific DNA binding
LDIMBGKD_01004 0.0 guaA 6.3.5.2 - F ko:K01951 ko00230,ko00983,ko01100,map00230,map00983,map01100 ko00000,ko00001,ko00002,ko01000,ko01002 Catalyzes the synthesis of GMP from XMP
LDIMBGKD_01005 0.0 xfp 4.1.2.22, 4.1.2.9 - G ko:K01621 ko00030,ko00710,ko01100,ko01120,map00030,map00710,map01100,map01120 ko00000,ko00001,ko01000 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase
LDIMBGKD_01006 0.0 pta 2.3.1.8 - C ko:K13788 ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 phosphate acetyltransferase
LDIMBGKD_01007 2.86e-296 ackA 2.7.2.1 - H ko:K00925 ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
LDIMBGKD_01008 0.0 aroA 2.5.1.19 - E ko:K00800 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
LDIMBGKD_01010 8.6e-295 - - - - - - - -
LDIMBGKD_01011 0.0 glgX 3.2.1.68 CBM48,GH13 G ko:K01214 ko00500,ko01100,ko01110,map00500,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Belongs to the glycosyl hydrolase 13 family
LDIMBGKD_01012 3.06e-158 - - - L - - - NUDIX domain
LDIMBGKD_01013 3.04e-235 - - - L - - - NIF3 (NGG1p interacting factor 3)
LDIMBGKD_01014 0.0 polA 2.7.7.7 - L ko:K02335 ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440 ko00000,ko00001,ko01000,ko03032,ko03400 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
LDIMBGKD_01016 7.75e-158 pdtaR - - T ko:K22010 - ko00000,ko00002,ko02022 Response regulator receiver domain protein
LDIMBGKD_01017 6.77e-153 aspA 3.6.1.13 - L ko:K01515 ko00230,map00230 ko00000,ko00001,ko01000 NUDIX domain
LDIMBGKD_01019 0.0 pyk 2.7.1.40 - G ko:K00873 ko00010,ko00230,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko04930,ko05165,ko05203,ko05230,map00010,map00230,map00620,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map04930,map05165,map05203,map05230 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Pyruvate kinase
LDIMBGKD_01020 5.79e-230 terC - - P ko:K05794 - ko00000 Integral membrane protein, TerC family
LDIMBGKD_01021 0.0 uvrB - - L ko:K03702 ko03420,map03420 ko00000,ko00001,ko03400 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
LDIMBGKD_01023 4.47e-315 rpsA - - J ko:K02945 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal protein S1
LDIMBGKD_01024 3.33e-211 folD 1.5.1.5, 3.5.4.9 - F ko:K01491 ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
LDIMBGKD_01025 5.74e-233 - - - P ko:K02077 - ko00000,ko00002,ko02000 Zinc-uptake complex component A periplasmic
LDIMBGKD_01026 4.24e-217 - - - P ko:K02074 - ko00000,ko00002,ko02000 ATPases associated with a variety of cellular activities
LDIMBGKD_01027 9.24e-185 znuB - - U ko:K02075 - ko00000,ko00002,ko02000 ABC 3 transport family
LDIMBGKD_01028 1.31e-114 ispF 2.7.7.60, 4.6.1.12 - H ko:K01770,ko:K12506 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP)
LDIMBGKD_01029 1.02e-132 carD - - K ko:K07736 - ko00000,ko03000 CarD-like/TRCF domain
LDIMBGKD_01030 0.0 glgB 2.4.1.18 CBM48,GH13 G ko:K00700 ko00500,ko01100,ko01110,map00500,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko04147 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
LDIMBGKD_01031 3.21e-168 cseB - - T - - - Response regulator receiver domain protein
LDIMBGKD_01032 8.38e-258 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
LDIMBGKD_01033 3.71e-187 pyrE_1 - - S - - - Phosphoribosyl transferase domain
LDIMBGKD_01034 3.39e-195 - - - T - - - Eukaryotic phosphomannomutase
LDIMBGKD_01035 1.6e-72 - - - S - - - Zincin-like metallopeptidase
LDIMBGKD_01036 0.0 - - - - - - - -
LDIMBGKD_01037 0.0 - - - S - - - Glycosyl transferase, family 2
LDIMBGKD_01038 0.0 yvhJ - - K - - - Cell envelope-related transcriptional attenuator domain
LDIMBGKD_01039 5.18e-233 lytR2 - - K - - - Cell envelope-related transcriptional attenuator domain
LDIMBGKD_01040 9.82e-48 - - - D ko:K03466 - ko00000,ko03036 FtsK/SpoIIIE family
LDIMBGKD_01041 2.39e-225 - - - D ko:K03466 - ko00000,ko03036 FtsK/SpoIIIE family
LDIMBGKD_01042 5.33e-61 whiB - - K ko:K18955 - ko00000,ko03000 Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA
LDIMBGKD_01043 0.0 pdtaS 2.7.13.3 - T ko:K00936 - ko00000,ko00002,ko01000,ko01001,ko02022 ATPase histidine kinase DNA gyrase B HSP90 domain protein
LDIMBGKD_01044 8.08e-192 hlyIII - - S ko:K11068 - ko00000,ko02042 Haemolysin-III related
LDIMBGKD_01045 9.74e-105 greA - - K ko:K03624 - ko00000,ko03021 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
LDIMBGKD_01046 2.24e-97 fkbP 5.2.1.8 - G ko:K01802 - ko00000,ko01000 Peptidyl-prolyl cis-trans
LDIMBGKD_01047 0.0 sdaA 4.3.1.17 - E ko:K01752 ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230 ko00000,ko00001,ko01000 Serine dehydratase alpha chain
LDIMBGKD_01048 1.24e-136 - - - - - - - -
LDIMBGKD_01050 2.94e-238 ppx 3.6.1.11, 3.6.1.40 - FP ko:K01524 ko00230,map00230 ko00000,ko00001,ko01000 Ppx/GppA phosphatase family
LDIMBGKD_01051 2.44e-143 - - - S ko:K09009 - ko00000 Protein of unknown function (DUF501)
LDIMBGKD_01052 3.48e-128 - - - D - - - Septum formation initiator
LDIMBGKD_01053 8.66e-313 eno 4.2.1.11 - G ko:K01689 ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066 ko00000,ko00001,ko00002,ko01000,ko03019,ko04147 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
LDIMBGKD_01054 3.38e-209 - - - U ko:K15554 ko00920,ko02010,map00920,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
LDIMBGKD_01055 1.14e-224 - - - P ko:K15553 ko00920,ko02010,map00920,map02010 ko00000,ko00001,ko00002,ko02000 NMT1-like family
LDIMBGKD_01056 3.28e-165 ssuB - - P ko:K15555 ko00920,ko02010,map00920,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ATPases associated with a variety of cellular activities
LDIMBGKD_01058 0.0 mfd - - L ko:K03723 ko03420,map03420 ko00000,ko00001,ko01000,ko03400 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
LDIMBGKD_01059 3.18e-133 pth 3.1.1.29 - J ko:K01056 - ko00000,ko01000,ko03012 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
LDIMBGKD_01060 4.19e-141 - 2.3.1.183 - M ko:K03823 ko00440,ko01130,map00440,map01130 ko00000,ko00001,ko01000 Acetyltransferase (GNAT) domain
LDIMBGKD_01061 0.0 - - - S ko:K09118 - ko00000 Uncharacterised protein family (UPF0182)
LDIMBGKD_01062 2.04e-292 - 3.2.1.52 - G ko:K01207 ko00520,ko00531,ko01100,ko01501,map00520,map00531,map01100,map01501 ko00000,ko00001,ko00002,ko01000 Glycosyl hydrolase family 3 N-terminal domain protein
LDIMBGKD_01063 9.54e-23 - - - S - - - Selenoprotein, putative
LDIMBGKD_01064 0.0 cstA - - T ko:K06200 - ko00000 5TM C-terminal transporter carbon starvation CstA
LDIMBGKD_01065 2.88e-43 - - - V ko:K06147 - ko00000,ko02000 ABC transporter transmembrane region
LDIMBGKD_01066 3.7e-98 - - - V ko:K11085 ko02010,map02010 ko00000,ko00001,ko01000,ko02000 (ABC) transporter
LDIMBGKD_01067 7.43e-130 - - - S - - - AAA domain, putative AbiEii toxin, Type IV TA system
LDIMBGKD_01069 3.25e-115 - - - K - - - Winged helix DNA-binding domain
LDIMBGKD_01070 3.72e-105 - - - F - - - Nucleoside 2-deoxyribosyltransferase
LDIMBGKD_01071 0.0 aspA 4.3.1.1 - E ko:K01744 ko00250,ko01100,map00250,map01100 ko00000,ko00001,ko01000 Fumarase C C-terminus
LDIMBGKD_01072 6.85e-54 - - - P ko:K04758 - ko00000,ko02000 FeoA
LDIMBGKD_01073 0.0 feoB - - P ko:K04759 - ko00000,ko02000 transporter of a GTP-driven Fe(2 ) uptake system
LDIMBGKD_01074 1.87e-81 - - - - - - - -
LDIMBGKD_01075 0.0 zwf 1.1.1.363, 1.1.1.49 - G ko:K00036 ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,ko05230,map00030,map00480,map01100,map01110,map01120,map01130,map01200,map05230 ko00000,ko00001,ko00002,ko01000,ko04147 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
LDIMBGKD_01076 5.42e-232 opcA - - G - - - Glucose-6-phosphate dehydrogenase subunit
LDIMBGKD_01077 2.42e-131 pgl 3.1.1.31 - G ko:K01057 ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
LDIMBGKD_01078 0.0 gnd 1.1.1.343, 1.1.1.44 - H ko:K00033 ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
LDIMBGKD_01079 2.15e-22 M1-966 3.4.13.21 - E ko:K05995 - ko00000,ko01000,ko01002 Belongs to the peptidase S51 family
LDIMBGKD_01080 0.0 brnQ - - U ko:K03311 - ko00000 Component of the transport system for branched-chain amino acids
LDIMBGKD_01081 2.95e-245 msrA 1.8.4.11, 1.8.4.12 - O ko:K07304,ko:K12267 - ko00000,ko01000 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
LDIMBGKD_01082 0.0 - 3.6.3.4, 3.6.3.54 - P ko:K01533,ko:K17686 ko01524,ko04016,map01524,map04016 ko00000,ko00001,ko01000 E1-E2 ATPase
LDIMBGKD_01083 1.53e-189 - - - S ko:K07124 - ko00000 Belongs to the short-chain dehydrogenases reductases (SDR) family
LDIMBGKD_01084 0.0 - - - JKL - - - helicase superfamily c-terminal domain
LDIMBGKD_01085 3.88e-253 - - - S - - - Conserved hypothetical protein 698
LDIMBGKD_01086 0.0 rutG - - F ko:K02824,ko:K03458 - ko00000,ko02000 Permease family
LDIMBGKD_01087 1.66e-273 - - - I - - - Hydrolase, alpha beta domain protein
LDIMBGKD_01088 9.64e-47 - - - - - - - -
LDIMBGKD_01089 1.32e-76 - - - S - - - Cupin 2, conserved barrel domain protein
LDIMBGKD_01090 2.17e-256 ychF - - J ko:K06942 - ko00000,ko03009 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
LDIMBGKD_01091 4.3e-186 proC 1.5.1.2 - E ko:K00286 ko00330,ko01100,ko01110,ko01130,ko01230,map00330,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
LDIMBGKD_01092 0.0 pip 3.4.11.5 - S ko:K01259 ko00330,map00330 ko00000,ko00001,ko01000,ko01002 alpha/beta hydrolase fold
LDIMBGKD_01093 0.0 - - - T - - - Histidine kinase
LDIMBGKD_01094 3.24e-157 - - - K - - - helix_turn_helix, Lux Regulon
LDIMBGKD_01095 0.0 - - - MV ko:K02004 - ko00000,ko00002,ko02000 MacB-like periplasmic core domain
LDIMBGKD_01096 2.32e-219 - - - V ko:K02003 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
LDIMBGKD_01097 1.68e-136 ecfT - - P ko:K02008,ko:K16783,ko:K16785 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 transmembrane transporter activity
LDIMBGKD_01098 0.0 ykoD - - P ko:K16784,ko:K16786,ko:K16787 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 AAA domain, putative AbiEii toxin, Type IV TA system
LDIMBGKD_01100 0.0 - 2.5.1.49 - E ko:K01740 ko00270,ko01100,map00270,map01100 ko00000,ko00001,ko01000 Aminotransferase class-V
LDIMBGKD_01101 1.2e-211 pdxY 2.7.1.35 - H ko:K00868 ko00750,ko01100,map00750,map01100 ko00000,ko00001,ko01000 Phosphomethylpyrimidine kinase
LDIMBGKD_01102 1.89e-114 yraN - - L ko:K07460 - ko00000 Belongs to the UPF0102 family
LDIMBGKD_01103 0.0 comM - - O ko:K07391 - ko00000 Magnesium chelatase, subunit ChlI C-terminal
LDIMBGKD_01104 1.44e-277 dprA - - LU ko:K04096 - ko00000 DNA recombination-mediator protein A
LDIMBGKD_01105 0.0 sdhA 1.3.5.1, 1.3.5.4, 1.4.3.16 - C ko:K00239,ko:K00278 ko00020,ko00190,ko00250,ko00650,ko00720,ko00760,ko01100,ko01110,ko01120,ko01130,ko01200,ko05134,map00020,map00190,map00250,map00650,map00720,map00760,map01100,map01110,map01120,map01130,map01200,map05134 ko00000,ko00001,ko00002,ko01000 Succinate dehydrogenase flavoprotein subunit
LDIMBGKD_01106 1.36e-234 sdhB 1.3.5.1, 1.3.5.4 - C ko:K00240 ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 4Fe-4S dicluster domain
LDIMBGKD_01107 2.13e-157 safC - - S - - - O-methyltransferase
LDIMBGKD_01108 1.06e-192 fmt2 3.2.2.10 - S ko:K06966 ko00230,ko00240,map00230,map00240 ko00000,ko00001,ko01000 Belongs to the LOG family
LDIMBGKD_01109 0.0 nhaA - - P ko:K03313 - ko00000,ko02000 Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
LDIMBGKD_01110 7.29e-311 patB 4.4.1.8 - E ko:K14155 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 ko00000,ko00001,ko01000,ko01007 Aminotransferase, class I II
LDIMBGKD_01113 0.0 clpX - - O ko:K03544 ko04112,map04112 ko00000,ko00001,ko03110 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
LDIMBGKD_01114 5.41e-160 clpP 3.4.21.92 - O ko:K01358 ko04112,ko04212,map04112,map04212 ko00000,ko00001,ko01000,ko01002 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
LDIMBGKD_01115 3.08e-147 clpP1 3.4.21.92 - O ko:K01358 ko04112,ko04212,map04112,map04212 ko00000,ko00001,ko01000,ko01002 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
LDIMBGKD_01116 0.0 - - - P ko:K03281 - ko00000 Voltage gated chloride channel
LDIMBGKD_01117 1.73e-305 tig - - D ko:K03545 - ko00000 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
LDIMBGKD_01118 0.0 rnd 3.1.13.5 - J ko:K03684 - ko00000,ko01000,ko03016 3'-5' exonuclease
LDIMBGKD_01119 6.98e-224 pflA 1.97.1.4 - C ko:K04069 - ko00000,ko01000 Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
LDIMBGKD_01120 0.0 pflB 2.3.1.54 - C ko:K00656 ko00620,ko00640,ko00650,ko01100,ko01120,map00620,map00640,map00650,map01100,map01120 ko00000,ko00001,ko01000 Pyruvate formate lyase-like
LDIMBGKD_01121 2.17e-43 - - - - - - - -
LDIMBGKD_01122 0.0 nadE 6.3.5.1 - H ko:K01950 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
LDIMBGKD_01123 1.09e-288 - - - S - - - Peptidase dimerisation domain
LDIMBGKD_01124 3.75e-155 metI - - P ko:K02072 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
LDIMBGKD_01125 6.49e-304 metN - - P ko:K02071 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
LDIMBGKD_01126 2.68e-232 - - - P ko:K02073 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 NLPA lipoprotein
LDIMBGKD_01127 2.81e-133 ppiA 5.2.1.8 - G ko:K03767,ko:K03768 ko01503,ko04217,map01503,map04217 ko00000,ko00001,ko01000,ko03110,ko04147 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
LDIMBGKD_01128 0.0 relA 2.7.6.5, 3.1.7.2 - KT ko:K00951,ko:K01139 ko00230,map00230 ko00000,ko00001,ko01000,ko03009 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
LDIMBGKD_01129 4.9e-108 dut 3.6.1.23 - F ko:K01520 ko00240,ko00983,ko01100,map00240,map00983,map01100 ko00000,ko00001,ko00002,ko01000,ko03400 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA
LDIMBGKD_01130 1.42e-62 - - - S - - - Domain of unknown function (DUF4193)
LDIMBGKD_01131 1.75e-310 - - - S - - - Protein of unknown function (DUF3071)
LDIMBGKD_01132 9.9e-274 - - - S - - - Type I phosphodiesterase / nucleotide pyrophosphatase
LDIMBGKD_01133 0.0 gyrA2 5.99.1.3 - L ko:K02469 - ko00000,ko01000,ko03032,ko03400 DNA topoisomerase (ATP-hydrolyzing)
LDIMBGKD_01134 2.37e-220 - - - G ko:K05340 - ko00000,ko02000 Sugar transport protein
LDIMBGKD_01135 0.0 lhr - - L ko:K03724 - ko00000,ko01000,ko03400 DEAD DEAH box helicase
LDIMBGKD_01136 1.64e-56 - - - G - - - Major facilitator superfamily
LDIMBGKD_01138 4.21e-279 - - - G - - - Major Facilitator Superfamily
LDIMBGKD_01139 1.21e-288 - 2.4.1.345 GT4 M ko:K08256 - ko00000,ko01000,ko01003 Glycosyl transferase 4-like domain
LDIMBGKD_01140 0.0 gyrB2 5.99.1.3 - L ko:K02470 - ko00000,ko01000,ko03032,ko03400 DNA topoisomerase (ATP-hydrolyzing)
LDIMBGKD_01141 2.66e-264 sigA - - K ko:K03086 - ko00000,ko03021 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
LDIMBGKD_01142 8.16e-167 - - - - - - - -
LDIMBGKD_01143 3e-258 idsA 2.5.1.1, 2.5.1.10, 2.5.1.29 - H ko:K13787 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000,ko01006 Belongs to the FPP GGPP synthase family
LDIMBGKD_01144 0.0 pknL 2.7.11.1 - KLT ko:K08884,ko:K12132 - ko00000,ko01000,ko01001 PASTA
LDIMBGKD_01145 1.73e-178 plsC2 2.3.1.51 - I ko:K00655 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko01004 Phosphate acyltransferases
LDIMBGKD_01146 7.66e-127 - - - - - - - -
LDIMBGKD_01147 7.03e-247 trpD 2.4.2.18 - F ko:K00766 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
LDIMBGKD_01148 0.0 secA - - U ko:K03070 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
LDIMBGKD_01149 1.82e-160 hpf - - J ko:K05808 - ko00000,ko03009 Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
LDIMBGKD_01151 8.12e-146 recX - - S ko:K03565 - ko00000,ko03400 Modulates RecA activity
LDIMBGKD_01152 9.92e-265 recA - - L ko:K03553 ko03440,map03440 ko00000,ko00001,ko00002,ko03400 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
LDIMBGKD_01153 1.78e-58 - - - S - - - Protein of unknown function (DUF3046)
LDIMBGKD_01154 6.75e-113 - - - K - - - Helix-turn-helix XRE-family like proteins
LDIMBGKD_01155 1.92e-144 cinA 3.5.1.42 - S ko:K03743 ko00760,map00760 ko00000,ko00001,ko01000 Belongs to the CinA family
LDIMBGKD_01156 8.42e-156 pgsA 2.7.8.41, 2.7.8.5 - I ko:K00995,ko:K08744 ko00564,ko01100,map00564,map01100 ko00000,ko00001,ko01000 Belongs to the CDP-alcohol phosphatidyltransferase class-I family
LDIMBGKD_01157 0.0 ftsK - - D ko:K03466 - ko00000,ko03036 FtsK SpoIIIE family protein
LDIMBGKD_01158 1.24e-246 miaA 2.5.1.75 - F ko:K00791 ko00908,ko01100,ko01110,map00908,map01100,map01110 ko00000,ko00001,ko01000,ko01006,ko03016 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
LDIMBGKD_01159 0.0 miaB 2.8.4.3 - H ko:K06168 - ko00000,ko01000,ko03016 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
LDIMBGKD_01160 3.69e-184 ywaC 2.7.6.5 - S ko:K07816 ko00230,map00230 ko00000,ko00001,ko01000 Region found in RelA / SpoT proteins
LDIMBGKD_01162 6.82e-254 - 1.4.1.12, 1.4.1.26 - S ko:K21672 ko00310,ko00330,ko00472,map00310,map00330,map00472 ko00000,ko00001,ko01000 Dihydrodipicolinate reductase, N-terminus
LDIMBGKD_01163 3.98e-295 - - - V ko:K01992 - ko00000,ko00002,ko02000 ABC-2 family transporter protein
LDIMBGKD_01164 1.71e-301 - - - V ko:K01992 - ko00000,ko00002,ko02000 ABC-2 family transporter protein
LDIMBGKD_01165 1.62e-236 - - - V ko:K01990 - ko00000,ko00002,ko02000 ATPases associated with a variety of cellular activities
LDIMBGKD_01166 2.55e-268 - - - T - - - Histidine kinase
LDIMBGKD_01167 2.12e-145 - - - K - - - helix_turn_helix, Lux Regulon
LDIMBGKD_01168 0.0 - - - S - - - Protein of unknown function DUF262
LDIMBGKD_01169 3.4e-127 - 2.3.1.18, 2.3.1.79 - S ko:K00633,ko:K00661 - ko00000,ko01000 Bacterial transferase hexapeptide repeat protein
LDIMBGKD_01170 8.05e-47 - - - - - - - -
LDIMBGKD_01171 0.0 acnA 4.2.1.3 - C ko:K01681 ko00020,ko00630,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230 br01601,ko00000,ko00001,ko00002,ko01000 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
LDIMBGKD_01172 0.0 ctpE - - P ko:K12952 - ko00000,ko01000 E1-E2 ATPase
LDIMBGKD_01173 3.81e-133 - - - - - - - -
LDIMBGKD_01174 0.0 - - - L - - - Resolvase, N terminal domain
LDIMBGKD_01176 0.0 - - - - - - - -
LDIMBGKD_01177 3.22e-36 - - - - - - - -
LDIMBGKD_01178 2.99e-122 - - - D ko:K03496 - ko00000,ko03036,ko04812 Involved in chromosome partitioning
LDIMBGKD_01180 5.94e-64 - - - - - - - -
LDIMBGKD_01181 0.0 - - - S - - - Relaxase/Mobilisation nuclease domain
LDIMBGKD_01182 8.6e-121 - - - S - - - Bacterial mobilisation protein (MobC)
LDIMBGKD_01184 7.06e-266 - - - S ko:K06919 - ko00000 Poxvirus D5 protein-like
LDIMBGKD_01185 2.12e-37 - - - K - - - Helix-turn-helix domain
LDIMBGKD_01187 0.0 rumA 2.1.1.190 - J ko:K03215 - ko00000,ko01000,ko03009 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
LDIMBGKD_01188 2.68e-176 - - - S - - - Protein of unknown function (DUF3159)
LDIMBGKD_01189 5.41e-204 - - - S - - - Protein of unknown function (DUF3710)
LDIMBGKD_01190 4.59e-217 xth 3.1.11.2 - L ko:K01142 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 Endonuclease/Exonuclease/phosphatase family
LDIMBGKD_01191 2.47e-152 - - - - - - - -
LDIMBGKD_01192 1.95e-124 tnpA - - L - - - Transposase
LDIMBGKD_01193 7.02e-177 tnpA - - L - - - Transposase
LDIMBGKD_01194 0.0 dppD - - P ko:K02031,ko:K02032 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 Belongs to the ABC transporter superfamily
LDIMBGKD_01195 9.25e-220 dppC - - EP ko:K02034,ko:K15582 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 N-terminal TM domain of oligopeptide transport permease C
LDIMBGKD_01196 1.48e-199 dppB - - EP ko:K02033,ko:K15581 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
LDIMBGKD_01197 0.0 dppA - - E ko:K02035,ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter, substrate-binding protein, family 5
LDIMBGKD_01198 1.68e-227 xerC - - D ko:K03733,ko:K04763 - ko00000,ko03036 Belongs to the 'phage' integrase family. XerC subfamily
LDIMBGKD_01199 4.76e-190 - - - V ko:K02003 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
LDIMBGKD_01200 0.0 - - - MV ko:K02004 - ko00000,ko00002,ko02000 MacB-like periplasmic core domain
LDIMBGKD_01201 3.14e-54 - - - - - - - -
LDIMBGKD_01202 7.85e-270 tyrA 1.3.1.12 - E ko:K00210,ko:K04517 ko00400,ko00401,ko01100,ko01110,ko01130,ko01230,map00400,map00401,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Prephenate dehydrogenase
LDIMBGKD_01203 2.11e-275 pheA 4.2.1.51, 5.4.99.5 - E ko:K04518,ko:K14170 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Prephenate dehydratase
LDIMBGKD_01204 2.22e-132 - - - - - - - -
LDIMBGKD_01205 0.0 typA - - T ko:K06207 - ko00000 Elongation factor G C-terminus
LDIMBGKD_01206 0.0 nanT - - U ko:K03290,ko:K08178,ko:K08369 - ko00000,ko02000 Sugar (and other) transporter
LDIMBGKD_01207 1.01e-200 - 3.6.1.55 - F ko:K03574 - ko00000,ko01000,ko03400 NUDIX hydrolase
LDIMBGKD_01208 1.55e-194 soj - - D ko:K03496 - ko00000,ko03036,ko04812 CobQ CobB MinD ParA nucleotide binding domain protein
LDIMBGKD_01209 9.9e-214 xerD - - D ko:K03733,ko:K04763 - ko00000,ko03036 recombinase XerD
LDIMBGKD_01210 1.63e-82 rplT - - J ko:K02887 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
LDIMBGKD_01211 1.79e-34 rpmI - - J ko:K02916 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal protein L35
LDIMBGKD_01212 2.25e-136 infC - - J ko:K02520 - ko00000,ko03012,ko03029 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
LDIMBGKD_01213 1.68e-193 - 2.7.6.2 - H ko:K00949 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko01000 Thiamin pyrophosphokinase, vitamin B1 binding domain
LDIMBGKD_01214 1.3e-264 gap 1.2.1.12 - G ko:K00134 ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
LDIMBGKD_01215 3.74e-115 ybaK - - J ko:K03976 - ko00000,ko01000,ko03016 Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
LDIMBGKD_01216 4.77e-229 ispH 1.17.7.4 - IM ko:K03527 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
LDIMBGKD_01217 1.48e-251 - 5.1.3.3 - G ko:K01785 ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130 ko00000,ko00001,ko00002,ko01000 Aldose 1-epimerase
LDIMBGKD_01218 1.32e-72 - - - - - - - -
LDIMBGKD_01219 2.85e-169 sigH - - K ko:K03088 - ko00000,ko03021 Belongs to the sigma-70 factor family. ECF subfamily
LDIMBGKD_01220 0.0 murE 6.3.2.13 - M ko:K01928 ko00300,ko00550,map00300,map00550 ko00000,ko00001,ko01000,ko01011 Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
LDIMBGKD_01221 2e-255 - - - V - - - Acetyltransferase (GNAT) domain
LDIMBGKD_01222 0.0 folC 6.3.2.12, 6.3.2.17 - H ko:K11754 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko00002,ko01000 Mur ligase middle domain
LDIMBGKD_01223 3.29e-146 - - - KT - - - cheY-homologous receiver domain
LDIMBGKD_01224 1.92e-247 - - - T - - - Histidine kinase
LDIMBGKD_01225 1.69e-190 - - - - - - - -
LDIMBGKD_01226 0.0 pepP 3.4.11.9 - E ko:K01262 - ko00000,ko01000,ko01002 Aminopeptidase P, N-terminal domain
LDIMBGKD_01227 1.76e-126 - - - F - - - NUDIX domain
LDIMBGKD_01228 1.08e-254 - 2.7.1.2 - GK ko:K00845 ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 ROK family
LDIMBGKD_01229 4.77e-216 - 2.7.1.4 - G ko:K00847 ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100 ko00000,ko00001,ko01000 pfkB family carbohydrate kinase
LDIMBGKD_01230 1.49e-107 dtd - - J ko:K07560 - ko00000,ko01000,ko03016 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
LDIMBGKD_01232 0.0 - - - P ko:K02031,ko:K02032 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 Belongs to the ABC transporter superfamily
LDIMBGKD_01233 1e-271 dppC - - EP ko:K02034 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
LDIMBGKD_01234 1.05e-238 dppB - - EP ko:K02033 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
LDIMBGKD_01235 0.0 - - - E ko:K02035 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 Bacterial extracellular solute-binding proteins, family 5 Middle
LDIMBGKD_01236 1.63e-298 ftsQ - - D ko:K03589 ko04112,map04112 ko00000,ko00001,ko03036 Cell division protein FtsQ
LDIMBGKD_01237 0.0 murC 6.3.2.8 - M ko:K01924 ko00471,ko00550,ko01100,map00471,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Belongs to the MurCDEF family
LDIMBGKD_01238 7.27e-207 murG 2.4.1.227, 6.3.2.8 GT28 M ko:K01924,ko:K02563 ko00471,ko00550,ko01100,ko01502,ko04112,map00471,map00550,map01100,map01502,map04112 ko00000,ko00001,ko01000,ko01011 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
LDIMBGKD_01239 0.0 ftsW 2.4.1.227 GT28 D ko:K02563,ko:K03588 ko00550,ko01100,ko01502,ko04112,map00550,map01100,map01502,map04112 ko00000,ko00001,ko01000,ko01011,ko02000,ko03036 Belongs to the SEDS family
LDIMBGKD_01240 0.0 murD 6.3.2.9 - M ko:K01925 ko00471,ko00550,ko01100,map00471,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
LDIMBGKD_01241 1.21e-267 mraY 2.7.8.13 - M ko:K01000 ko00550,ko01100,ko01502,map00550,map01100,map01502 ko00000,ko00001,ko01000,ko01011 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
LDIMBGKD_01242 0.0 murF 6.3.2.10 - M ko:K01929 ko00300,ko00550,ko01100,ko01502,map00300,map00550,map01100,map01502 ko00000,ko00001,ko01000,ko01011 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
LDIMBGKD_01243 9.34e-204 - - - M - - - Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
LDIMBGKD_01244 3.58e-226 ftsI 3.4.16.4 - M ko:K03587 ko00550,ko01501,map00550,map01501 ko00000,ko00001,ko01000,ko01011,ko03036 Penicillin-binding protein, transpeptidase domain protein
LDIMBGKD_01245 9.38e-183 ftsI 3.4.16.4 - M ko:K03587 ko00550,ko01501,map00550,map01501 ko00000,ko00001,ko01000,ko01011,ko03036 Penicillin-binding protein, transpeptidase domain protein
LDIMBGKD_01246 1.84e-118 - - - D - - - Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
LDIMBGKD_01247 4.96e-248 rsmH 2.1.1.199 - J ko:K03438 - ko00000,ko01000,ko03009 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
LDIMBGKD_01248 5.36e-111 mraZ - - K ko:K03925 - ko00000 Belongs to the MraZ family
LDIMBGKD_01249 0.0 - - - L - - - DNA helicase
LDIMBGKD_01250 1.59e-289 serA 1.1.1.399, 1.1.1.95 - EH ko:K00058 ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko04147 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
LDIMBGKD_01251 1.85e-125 nrdR - - K ko:K07738 - ko00000,ko03000 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
LDIMBGKD_01252 3.77e-14 - - - M - - - LysM domain
LDIMBGKD_01253 1.06e-165 lexA 3.4.21.88 - K ko:K01356 - ko00000,ko00002,ko01000,ko01002,ko03400 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
LDIMBGKD_01254 2.23e-212 czcD - - P ko:K16264 - ko00000,ko02000 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
LDIMBGKD_01255 3.25e-225 ldh 1.1.1.27, 1.1.1.37 - C ko:K00016,ko:K00024 ko00010,ko00020,ko00270,ko00620,ko00630,ko00640,ko00680,ko00710,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko04922,map00010,map00020,map00270,map00620,map00630,map00640,map00680,map00710,map00720,map01100,map01110,map01120,map01130,map01200,map04922 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the LDH MDH superfamily. LDH family
LDIMBGKD_01256 0.0 hflX - - S ko:K03665 - ko00000,ko03009 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
LDIMBGKD_01257 1.27e-150 rsmC 2.1.1.172 - J ko:K00564 - ko00000,ko01000,ko03009 Ribosomal protein L11 methyltransferase (PrmA)
LDIMBGKD_01258 0.0 hrpA 3.6.4.13 - L ko:K03578 - ko00000,ko01000 Helicase associated domain (HA2) Add an annotation
LDIMBGKD_01259 0.0 glnA2 6.3.1.2 - E ko:K01915 ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727 ko00000,ko00001,ko01000,ko04147 glutamine synthetase
LDIMBGKD_01260 1.28e-230 - - - S - - - Uncharacterized protein conserved in bacteria (DUF2252)
LDIMBGKD_01261 3.66e-167 hisA 5.3.1.16, 5.3.1.24 - E ko:K01814,ko:K01817 ko00340,ko00400,ko01100,ko01110,ko01130,ko01230,map00340,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Histidine biosynthesis protein
LDIMBGKD_01262 2.09e-155 hisH - - E ko:K02501 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
LDIMBGKD_01263 4.58e-167 - - - - - - - -
LDIMBGKD_01264 2.09e-143 hisB 3.1.3.15, 4.2.1.19 - E ko:K01089,ko:K01693 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Imidazoleglycerol-phosphate dehydratase
LDIMBGKD_01265 3.08e-287 hisC 2.6.1.9 - E ko:K00817 ko00340,ko00350,ko00360,ko00400,ko00401,ko00960,ko01100,ko01110,ko01130,ko01230,map00340,map00350,map00360,map00400,map00401,map00960,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
LDIMBGKD_01266 0.0 hisD 1.1.1.23 - E ko:K00013 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
LDIMBGKD_01267 0.0 dnaE 2.7.7.7 - L ko:K02337 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase III alpha subunit
LDIMBGKD_01269 5.2e-225 rluD 5.4.99.23 - J ko:K06180 - ko00000,ko01000,ko03009 Responsible for synthesis of pseudouridine from uracil
LDIMBGKD_01270 1.34e-127 lspA 3.4.23.36 - MU ko:K03101 ko03060,map03060 ko00000,ko00001,ko01000,ko01002 This protein specifically catalyzes the removal of signal peptides from prolipoproteins
LDIMBGKD_01271 7.28e-149 - - - V - - - DivIVA protein
LDIMBGKD_01272 1.18e-56 - - - S ko:K02221 - ko00000,ko02044 YGGT family
LDIMBGKD_01273 2.22e-103 sepF - - D ko:K09772 - ko00000,ko03036 Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
LDIMBGKD_01274 2.94e-282 ftsZ - - D ko:K03531 ko04112,map04112 ko00000,ko00001,ko02048,ko03036,ko04812 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
LDIMBGKD_01275 3.31e-316 dus - - J - - - Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
LDIMBGKD_01276 0.0 glyQS 6.1.1.14 - J ko:K01880 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Catalyzes the attachment of glycine to tRNA(Gly)
LDIMBGKD_01277 7.5e-125 thiM 2.7.1.50 - H ko:K00878 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
LDIMBGKD_01278 0.0 thiE 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 - H ko:K03147,ko:K14153 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko00002,ko01000 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)
LDIMBGKD_01279 7.04e-79 - - - S - - - Thiamine-binding protein
LDIMBGKD_01280 2.21e-255 - - - K ko:K02529 - ko00000,ko03000 helix_turn _helix lactose operon repressor
LDIMBGKD_01281 9.04e-316 lacY - - P ko:K02532 - ko00000,ko02000 LacY proton/sugar symporter
LDIMBGKD_01282 0.0 fosC 3.2.1.26 GH32 G ko:K01193 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 32 family
LDIMBGKD_01283 2.79e-187 - - - P - - - Binding-protein-dependent transport system inner membrane component
LDIMBGKD_01284 6.98e-233 - - - P - - - NMT1/THI5 like
LDIMBGKD_01285 1.75e-295 - - - F - - - nucleoside hydrolase
LDIMBGKD_01287 3.31e-194 uppS 2.5.1.31, 2.5.1.86, 2.5.1.88 - H ko:K00806,ko:K14215,ko:K21273 ko00900,ko01110,map00900,map01110 ko00000,ko00001,ko01000,ko01006 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
LDIMBGKD_01288 2.49e-168 recO - - L ko:K03584 ko03440,map03440 ko00000,ko00001,ko03400 Involved in DNA repair and RecF pathway recombination
LDIMBGKD_01289 0.0 - - - I - - - acetylesterase activity
LDIMBGKD_01290 1.48e-291 ispG 1.17.7.1, 1.17.7.3 - I ko:K03526 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
LDIMBGKD_01291 3.42e-279 dxr 1.1.1.267 - I ko:K00099 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP)
LDIMBGKD_01292 0.0 - - - NU - - - Tfp pilus assembly protein FimV
LDIMBGKD_01294 1.94e-105 - - - - - - - -
LDIMBGKD_01295 2.42e-96 - - - S - - - Protein of unknown function (DUF3052)
LDIMBGKD_01296 3.84e-232 sdrC - - T ko:K07177 ko02024,map02024 ko00000,ko00001,ko01002 Belongs to the peptidase S16 family
LDIMBGKD_01297 0.0 - - - S - - - Zincin-like metallopeptidase
LDIMBGKD_01298 0.0 uvrD2 3.6.4.12 - L ko:K03657 ko03420,ko03430,map03420,map03430 ko00000,ko00001,ko01000,ko03400 DNA helicase
LDIMBGKD_01299 3.28e-205 mphA - - S - - - Aminoglycoside phosphotransferase
LDIMBGKD_01300 3.95e-123 mphA - - S - - - Aminoglycoside phosphotransferase
LDIMBGKD_01301 1.45e-27 - - - S - - - Protein of unknown function (DUF3107)
LDIMBGKD_01302 1.14e-213 PPA1328 3.1.3.97, 3.1.4.57 - S ko:K07053,ko:K20859 ko00440,map00440 ko00000,ko00001,ko01000 DNA polymerase alpha chain like domain
LDIMBGKD_01303 1.13e-154 - - - S - - - Vitamin K epoxide reductase
LDIMBGKD_01304 3.17e-222 dapF 5.1.1.7 - E ko:K01778 ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine
LDIMBGKD_01305 3.84e-186 murI 5.1.1.3 - M ko:K01776 ko00471,ko01100,map00471,map01100 ko00000,ko00001,ko01000,ko01011 Provides the (R)-glutamate required for cell wall biosynthesis
LDIMBGKD_01306 1.21e-207 - - - S - - - Patatin-like phospholipase
LDIMBGKD_01307 4.24e-196 hflK - - O - - - prohibitin homologues
LDIMBGKD_01308 9.92e-211 glnH - - ET ko:K02030,ko:K10039 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Bacterial periplasmic substrate-binding proteins
LDIMBGKD_01309 2.41e-204 glnQ 3.6.3.21 - E ko:K02028 - ko00000,ko00002,ko01000,ko02000 ATP binding protein of ABC transporter for glutamate aspartate K02028
LDIMBGKD_01310 3.84e-140 glnP - - E ko:K02029,ko:K10040 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
LDIMBGKD_01311 1.29e-145 glnP2 - - E ko:K02029 - ko00000,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
LDIMBGKD_01312 1.18e-293 - 2.6.1.1, 2.6.1.2, 2.6.1.66, 2.6.1.83 - E ko:K00812,ko:K08969,ko:K10206,ko:K10907,ko:K14260,ko:K14261 ko00220,ko00250,ko00270,ko00290,ko00300,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00290,map00300,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Aminotransferase class I and II
LDIMBGKD_01313 3.64e-142 - - - P ko:K02072 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Psort location CytoplasmicMembrane, score 9.99
LDIMBGKD_01314 3e-280 metN - - P ko:K02071 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
LDIMBGKD_01315 1.19e-205 metQ - - M ko:K02073 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 NLPA lipoprotein
LDIMBGKD_01316 2.07e-251 - 1.1.1.169 - H ko:K00077 ko00770,ko01100,ko01110,map00770,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
LDIMBGKD_01317 1.07e-165 - - - K - - - acetyltransferase
LDIMBGKD_01318 1.48e-133 - 2.7.7.7 - L ko:K02342 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 Exonuclease, DNA polymerase III, epsilon subunit family
LDIMBGKD_01320 2.53e-10 - - - - - - - -
LDIMBGKD_01323 0.0 tetM - - J ko:K18220 - br01600,ko00000,ko01504 Elongation factor G, domain IV
LDIMBGKD_01324 0.0 lysI - - E ko:K03758 - ko00000,ko02000 Amino acid permease
LDIMBGKD_01325 1.04e-146 - - - - - - - -
LDIMBGKD_01326 0.0 dppA - - E ko:K02035,ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter, substrate-binding protein, family 5
LDIMBGKD_01327 0.0 - - - EGP ko:K18926 - ko00000,ko00002,ko02000 Major Facilitator Superfamily
LDIMBGKD_01328 1.16e-149 pspA - - KT ko:K03969 - ko00000 PspA/IM30 family
LDIMBGKD_01329 1.62e-314 - - - S - - - COG1512 Beta-propeller domains of methanol dehydrogenase type
LDIMBGKD_01331 0.0 ileS 6.1.1.5 - J ko:K01870 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
LDIMBGKD_01332 5.87e-32 - - - - - - - -
LDIMBGKD_01334 1.72e-129 - 3.1.3.48 - T ko:K01104 - ko00000,ko01000 Tyrosine phosphatase family
LDIMBGKD_01335 1.38e-122 - 3.2.1.4 GH5,GH9 G ko:K01179 ko00500,ko01100,map00500,map01100 ko00000,ko00001,ko01000 Cellulase (glycosyl hydrolase family 5)
LDIMBGKD_01337 1.9e-30 - - - - - - - -
LDIMBGKD_01338 0.0 - - - V ko:K06147 - ko00000,ko02000 ABC transporter transmembrane region
LDIMBGKD_01339 0.0 - - - V ko:K06147 - ko00000,ko02000 ABC transporter, ATP-binding protein
LDIMBGKD_01340 1.43e-40 - - - K - - - MarR family
LDIMBGKD_01341 1.01e-78 - - - S - - - NADPH-dependent FMN reductase
LDIMBGKD_01342 7.12e-62 adh 1.1.1.1 - C ko:K00001 ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220 ko00000,ko00001,ko01000 Zinc-binding dehydrogenase
LDIMBGKD_01344 1.38e-220 egtA 6.3.2.2 - H ko:K01919 ko00270,ko00480,ko01100,map00270,map00480,map01100 ko00000,ko00001,ko00002,ko01000 Glutamate-cysteine ligase family 2(GCS2)
LDIMBGKD_01345 0.0 hgdC - - I - - - CoA enzyme activase uncharacterised domain (DUF2229)
LDIMBGKD_01346 1.47e-129 - - - S - - - Protein of unknown function (DUF1211)
LDIMBGKD_01347 5.83e-78 - - - S ko:K08987 - ko00000 Protein of unknown function (DUF1304)
LDIMBGKD_01348 1.26e-181 - - - - - - - -
LDIMBGKD_01349 2.07e-190 nrdG 1.97.1.4 - O ko:K04068 - ko00000,ko01000 Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
LDIMBGKD_01350 0.0 nrdD 1.1.98.6 - F ko:K21636 ko00230,ko00240,ko01100,map00230,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Anaerobic ribonucleoside-triphosphate reductase
LDIMBGKD_01351 2.98e-305 xseA 3.1.11.6 - L ko:K03601 ko03430,map03430 ko00000,ko00001,ko01000,ko03400 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
LDIMBGKD_01352 4.21e-60 xseB 3.1.11.6 - L ko:K03602 ko03430,map03430 ko00000,ko00001,ko01000,ko03400 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
LDIMBGKD_01353 2.97e-243 - - - S ko:K18353 ko01502,ko02020,map01502,map02020 ko00000,ko00001,ko00002,ko01504 Endonuclease/Exonuclease/phosphatase family
LDIMBGKD_01355 5.11e-165 tmp1 - - S - - - Domain of unknown function (DUF4391)
LDIMBGKD_01356 2.09e-217 aspB 2.6.1.1, 2.6.1.2, 2.6.1.66 - E ko:K00812,ko:K08969,ko:K10907,ko:K14260 ko00220,ko00250,ko00270,ko00290,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00290,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Aminotransferase class-V
LDIMBGKD_01357 5.47e-130 vsr - - L ko:K07458 - ko00000,ko01000,ko03400 May nick specific sequences that contain T G mispairs resulting from m5C-deamination
LDIMBGKD_01358 0.0 - - - S - - - zinc finger
LDIMBGKD_01359 0.0 - - - L - - - Psort location Cytoplasmic, score
LDIMBGKD_01360 4.71e-162 def 3.5.1.88 - J ko:K01462 - ko00000,ko01000 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
LDIMBGKD_01361 0.0 glmM 5.4.2.10 - G ko:K03431 ko00520,ko01100,ko01130,map00520,map01100,map01130 ko00000,ko00001,ko01000 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
LDIMBGKD_01362 0.0 pepN 3.4.11.2 - E ko:K01256,ko:K08776 ko00480,ko01100,map00480,map01100 ko00000,ko00001,ko01000,ko01002 Peptidase family M1 domain
LDIMBGKD_01363 0.0 rnj - - J ko:K12574 ko03018,map03018 ko00000,ko00001,ko01000,ko03019 An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
LDIMBGKD_01364 3.41e-100 dapA 4.3.3.7 - E ko:K01714 ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
LDIMBGKD_01365 7.91e-173 dapB 1.17.1.8 - E ko:K00215 ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
LDIMBGKD_01366 0.0 - - - G - - - Major Facilitator Superfamily
LDIMBGKD_01367 4.8e-170 - - - K - - - -acetyltransferase
LDIMBGKD_01368 0.0 uvrD2 3.6.4.12 - L ko:K03657 ko03420,ko03430,map03420,map03430 ko00000,ko00001,ko01000,ko03400 Belongs to the helicase family. UvrD subfamily
LDIMBGKD_01369 0.0 - - - L - - - PD-(D/E)XK nuclease superfamily
LDIMBGKD_01370 1.94e-117 - - - L - - - PD-(D/E)XK nuclease superfamily
LDIMBGKD_01371 0.0 pknK 2.7.11.1 - KLT ko:K12132 - ko00000,ko01000,ko01001 Protein tyrosine kinase
LDIMBGKD_01372 0.0 - - - S - - - Fibronectin type 3 domain
LDIMBGKD_01373 8.04e-162 - - - S ko:K03924 - ko00000,ko01000 ATPase family associated with various cellular activities (AAA)
LDIMBGKD_01374 3.4e-266 - - - S - - - Protein of unknown function DUF58
LDIMBGKD_01375 0.0 - - - E - - - Transglutaminase-like superfamily
LDIMBGKD_01376 4.41e-132 - - - B - - - Belongs to the OprB family
LDIMBGKD_01377 1.49e-138 - - - T - - - Forkhead associated domain
LDIMBGKD_01378 0.0 rpoC 2.7.7.6 - K ko:K03046 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
LDIMBGKD_01379 0.0 rpoB 2.7.7.6 - K ko:K03043 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
LDIMBGKD_01380 2.17e-68 - - - - - - - -
LDIMBGKD_01381 2.24e-238 mutY - - L ko:K03575 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 FES
LDIMBGKD_01382 3.3e-165 spoU 2.1.1.207 - J ko:K03216 - ko00000,ko01000,ko03016 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
LDIMBGKD_01383 0.0 - - - S ko:K09157 - ko00000 UPF0210 protein
LDIMBGKD_01384 1.69e-57 - - - T ko:K07166 - ko00000 Belongs to the UPF0237 family
LDIMBGKD_01385 3.17e-182 - 3.4.22.70 - M ko:K07284 - ko00000,ko01000,ko01002,ko01011 Sortase family
LDIMBGKD_01386 3.52e-295 galK 2.7.1.6, 2.7.7.12 - G ko:K00849,ko:K00965 ko00052,ko00520,ko01100,ko04917,map00052,map00520,map01100,map04917 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the GHMP kinase family. GalK subfamily
LDIMBGKD_01387 0.0 galT 2.7.7.12 - C ko:K00965 ko00052,ko00520,ko01100,ko04917,map00052,map00520,map01100,map04917 ko00000,ko00001,ko00002,ko01000 Galactose-1-phosphate uridyl transferase, N-terminal domain
LDIMBGKD_01388 5.19e-184 - - - K - - - DeoR C terminal sensor domain
LDIMBGKD_01389 9.89e-143 ppm1 2.4.1.83 GT2 S ko:K00721 ko00510,ko01100,map00510,map01100 ko00000,ko00001,ko01000,ko01003 Glycosyl transferase family 2
LDIMBGKD_01390 2.16e-282 pyrD 1.3.5.2, 1.3.98.1 - F ko:K00226,ko:K00254 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor
LDIMBGKD_01391 2.6e-282 namA - - C - - - NADH:flavin oxidoreductase / NADH oxidase family
LDIMBGKD_01392 0.0 pon1 - - M - - - Transglycosylase
LDIMBGKD_01393 1.64e-178 crp - - K ko:K10914 ko02020,ko02024,ko02025,ko02026,ko05111,map02020,map02024,map02025,map02026,map05111 ko00000,ko00001,ko03000 helix_turn_helix, cAMP Regulatory protein
LDIMBGKD_01394 5.28e-283 lplA 6.3.1.20 - H ko:K03800 ko00785,ko01100,map00785,map01100 ko00000,ko00001,ko01000 Biotin/lipoate A/B protein ligase family
LDIMBGKD_01395 5.69e-105 - - - J - - - TM2 domain
LDIMBGKD_01396 1.84e-28 - - - - - - - -
LDIMBGKD_01397 1.06e-220 leuB 1.1.1.85 - CE ko:K00052 ko00290,ko00660,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map01100,map01110,map01210,map01230 br01601,ko00000,ko00001,ko00002,ko01000 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate
LDIMBGKD_01398 0.0 ptrB 3.4.21.83 - E ko:K01354 ko05142,ko05143,map05142,map05143 ko00000,ko00001,ko01000,ko01002 Peptidase, S9A B C family, catalytic domain protein
LDIMBGKD_01399 0.0 - - - S - - - Uncharacterized conserved protein (DUF2183)
LDIMBGKD_01400 5.74e-94 gcvH - - E ko:K02437 ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200 ko00000,ko00001,ko00002 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein
LDIMBGKD_01401 1.86e-267 nudC 3.6.1.22 - L ko:K03426 ko00760,ko01100,ko04146,map00760,map01100,map04146 ko00000,ko00001,ko01000 NADH pyrophosphatase zinc ribbon domain
LDIMBGKD_01402 2.25e-218 - - - I - - - Alpha/beta hydrolase family
LDIMBGKD_01403 1.69e-113 - - - F - - - Domain of unknown function (DUF4916)
LDIMBGKD_01404 1.18e-86 trxA 1.8.1.9 - O ko:K00384,ko:K03671 ko00450,ko04621,ko05418,map00450,map04621,map05418 ko00000,ko00001,ko01000,ko03110 Belongs to the thioredoxin family
LDIMBGKD_01405 3.66e-241 - - - S ko:K21688 - ko00000 G5
LDIMBGKD_01406 1.24e-97 - - - - - - - -
LDIMBGKD_01407 0.0 - - - S - - - Predicted membrane protein (DUF2142)
LDIMBGKD_01408 8.12e-238 - - - M - - - Glycosyl transferase family 2
LDIMBGKD_01409 0.0 - - - S - - - Protein of unknown function (DUF4012)
LDIMBGKD_01410 2.76e-214 rfbA 2.7.7.24 - H ko:K00973 ko00521,ko00523,ko00525,ko01130,map00521,map00523,map00525,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
LDIMBGKD_01411 0.0 rfbD 1.1.1.133, 5.1.3.13 - M ko:K00067,ko:K01790 ko00521,ko00523,ko01130,map00521,map00523,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
LDIMBGKD_01412 1.28e-263 rfbB 4.2.1.46 - M ko:K01710 ko00521,ko00523,ko00525,ko01055,ko01130,map00521,map00523,map00525,map01055,map01130 ko00000,ko00001,ko00002,ko01000 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
LDIMBGKD_01413 3.71e-236 - - - M - - - Glycosyl transferase family 2
LDIMBGKD_01414 0.0 - - - S - - - Psort location CytoplasmicMembrane, score 9.99
LDIMBGKD_01415 6.8e-219 - - - S - - - Glycosyl transferase family 2
LDIMBGKD_01416 6.41e-237 - 2.7.8.12 GT2 S ko:K09809,ko:K19427 - ko00000,ko01000 Glycosyltransferase like family 2
LDIMBGKD_01417 0.0 - - - - - - - -
LDIMBGKD_01418 2.66e-217 - - GT2 S ko:K12990 ko02024,ko02025,map02024,map02025 ko00000,ko00001,ko01000,ko01003,ko01005 Glycosyl transferase family 2
LDIMBGKD_01419 9.52e-180 - - - M - - - Domain of unknown function (DUF4422)
LDIMBGKD_01420 3.69e-208 - - GT2 S ko:K12992 ko02025,map02025 ko00000,ko00001,ko01000,ko01003,ko01005 Glycosyltransferase like family 2
LDIMBGKD_01421 4.46e-120 - - - M - - - Capsular polysaccharide synthesis protein
LDIMBGKD_01422 2.89e-292 ugd 1.1.1.22 - M ko:K00012 ko00040,ko00053,ko00520,ko01100,map00040,map00053,map00520,map01100 ko00000,ko00001,ko00002,ko01000 UDP binding domain
LDIMBGKD_01423 0.0 - - - M - - - Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
LDIMBGKD_01424 2.01e-65 - - - - - - - -
LDIMBGKD_01425 0.0 - - - U - - - Drug resistance MFS transporter, drug H antiporter-2 family
LDIMBGKD_01426 3.81e-309 mntH - - P ko:K03322 - ko00000,ko02000 H( )-stimulated, divalent metal cation uptake system
LDIMBGKD_01427 1.07e-173 - - - L - - - Protein of unknown function (DUF1524)
LDIMBGKD_01428 6.62e-199 pdxS 4.3.3.6 - H ko:K06215 ko00750,map00750 ko00000,ko00001,ko01000 Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
LDIMBGKD_01429 1.08e-137 pdxT 4.3.3.6 - H ko:K08681 ko00750,map00750 ko00000,ko00001,ko01000 Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
LDIMBGKD_01430 3.47e-69 - - - V ko:K06147,ko:K06148,ko:K16013 ko02010,map02010 ko00000,ko00001,ko02000 ABC transporter transmembrane region
LDIMBGKD_01431 0.0 - - - V ko:K06147,ko:K06148,ko:K16013 ko02010,map02010 ko00000,ko00001,ko02000 ABC transporter transmembrane region
LDIMBGKD_01432 0.0 fadD 6.2.1.3 - I ko:K01897 ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920 ko00000,ko00001,ko00002,ko01000,ko01004,ko04147 long-chain-fatty acid CoA ligase
LDIMBGKD_01433 0.0 maf - - DF ko:K06287 - ko00000 Maf-like protein
LDIMBGKD_01434 1.8e-129 etp 3.1.3.48 - T ko:K01104 - ko00000,ko01000 Low molecular weight phosphatase family
LDIMBGKD_01435 0.0 - - - S - - - Protein of unknown function (DUF4012)
LDIMBGKD_01436 4.27e-296 wcoI - - DM - - - Psort location CytoplasmicMembrane, score
LDIMBGKD_01437 1.62e-45 - - - L ko:K07483 - ko00000 Transposase
LDIMBGKD_01438 7e-215 tnp3521a2 - - L - - - Integrase core domain
LDIMBGKD_01439 1.64e-163 - - - K - - - Transcriptional regulator
LDIMBGKD_01440 8.75e-68 - - - D - - - Cellulose biosynthesis protein BcsQ
LDIMBGKD_01442 2.33e-25 - - - - - - - -
LDIMBGKD_01444 1.51e-29 - - - - - - - -
LDIMBGKD_01445 2.39e-200 - - - L - - - PFAM Integrase catalytic
LDIMBGKD_01446 7.67e-259 - - - L - - - Transposase and inactivated derivatives IS30 family
LDIMBGKD_01448 8.87e-70 - - - M - - - Glycosyl transferases group 1
LDIMBGKD_01449 2.88e-31 - - - M - - - Glycosyltransferase Family 4
LDIMBGKD_01450 1.33e-13 - - - M - - - O-Antigen ligase
LDIMBGKD_01451 2.71e-268 - 3.2.1.8 - G ko:K01181 - ko00000,ko01000 Glycosyl hydrolase family 10
LDIMBGKD_01452 1.62e-45 - - - L ko:K07483 - ko00000 Transposase
LDIMBGKD_01453 7e-215 tnp3521a2 - - L - - - Integrase core domain
LDIMBGKD_01454 6.11e-47 - - - S - - - Protein of unknown function (DUF4065)
LDIMBGKD_01455 1.44e-86 - - - S - - - Region found in RelA / SpoT proteins
LDIMBGKD_01456 3.32e-107 - - - - - - - -
LDIMBGKD_01459 7.56e-57 cas2 - - L ko:K09951 - ko00000,ko02048 CRISPR-associated protein (Cas_Cas2CT1978)
LDIMBGKD_01460 6.01e-78 cas1 - - L ko:K15342 - ko00000,ko02048,ko03400 CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
LDIMBGKD_01461 3.6e-96 casE - - S ko:K19126 - ko00000,ko02048 CRISPR_assoc
LDIMBGKD_01462 7.07e-103 casD - - S ko:K19125 - ko00000,ko02048 CRISPR-associated protein (Cas_Cas5)
LDIMBGKD_01463 2.77e-140 casC - - L ko:K19124 - ko00000,ko02048 CT1975-like protein
LDIMBGKD_01464 5.43e-52 casB - - S ko:K19046 - ko00000,ko02048 CRISPR-associated protein Cse2 (CRISPR_cse2)
LDIMBGKD_01465 2.88e-172 casA - - L ko:K19123 - ko00000,ko02048 CRISPR system CASCADE complex protein CasA
LDIMBGKD_01467 0.0 cas3 - - L ko:K07012 - ko00000,ko01000,ko02048 DEAD-like helicases superfamily
LDIMBGKD_01468 1.1e-231 thrB 2.7.1.39 - E ko:K00872 ko00260,ko01100,ko01110,ko01120,ko01230,map00260,map01100,map01110,map01120,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
LDIMBGKD_01469 1.26e-311 hom 1.1.1.3, 2.7.2.4 - E ko:K00003,ko:K12524 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Homoserine dehydrogenase
LDIMBGKD_01470 0.0 lysA 4.1.1.20 - E ko:K01586 ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
LDIMBGKD_01471 0.0 argS 6.1.1.19 - J ko:K01887 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Arginyl-tRNA synthetase
LDIMBGKD_01472 0.0 - 3.2.1.45 GH30 G ko:K01201 ko00511,ko00600,ko01100,ko04142,map00511,map00600,map01100,map04142 ko00000,ko00001,ko01000 Glycosyl hydrolase family 30 TIM-barrel domain
LDIMBGKD_01473 1.23e-86 psp1 3.5.99.10 - J ko:K09022 - ko00000,ko01000 Endoribonuclease L-PSP
LDIMBGKD_01474 3.85e-143 - - - P ko:K02026,ko:K10242 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
LDIMBGKD_01475 3.3e-233 - 2.4.1.20 GT36 G ko:K00702 ko00500,ko01100,map00500,map01100 ko00000,ko00001,ko01000 Glycosyl hydrolase 36 superfamily, catalytic domain
LDIMBGKD_01477 1.09e-216 ybbN - - O ko:K05838 - ko00000,ko03110 Tetratricopeptide repeat
LDIMBGKD_01478 6.91e-235 - - - - - - - -
LDIMBGKD_01479 1.91e-273 - - - - - - - -
LDIMBGKD_01480 2.47e-221 - 5.2.1.8 - M ko:K01802 - ko00000,ko01000 FKBP-type peptidyl-prolyl cis-trans isomerase
LDIMBGKD_01481 2.31e-178 nucS - - L ko:K07503 - ko00000,ko01000 Cleaves both 3' and 5' ssDNA extremities of branched DNA structures
LDIMBGKD_01482 1.28e-65 atpC - - C ko:K02114 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 Produces ATP from ADP in the presence of a proton gradient across the membrane
LDIMBGKD_01483 0.0 atpD 3.6.3.14 - C ko:K02112 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194,ko01000 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
LDIMBGKD_01484 1.72e-213 atpG - - C ko:K02115 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
LDIMBGKD_01485 0.0 atpA 3.6.3.14 - C ko:K02111 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194,ko01000 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
LDIMBGKD_01486 7.19e-196 atpH - - C ko:K02109,ko:K02113 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
LDIMBGKD_01487 2.71e-95 atpF - - C ko:K02109 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
LDIMBGKD_01488 2.54e-42 atpE - - C ko:K02110 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
LDIMBGKD_01489 3.54e-188 atpB - - C ko:K02108 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194,ko03110 it plays a direct role in the translocation of protons across the membrane
LDIMBGKD_01490 1.61e-261 metAA 2.3.1.46 - E ko:K00651 ko00270,ko00920,ko01100,ko01110,ko01230,map00270,map00920,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
LDIMBGKD_01491 0.0 - - - EGP - - - Major Facilitator Superfamily
LDIMBGKD_01492 6.66e-235 rihB 3.2.2.1, 3.2.2.8 - F ko:K01239,ko:K01250,ko:K10213 ko00230,ko00240,ko00760,ko01100,map00230,map00240,map00760,map01100 ko00000,ko00001,ko01000 Inosine-uridine preferring nucleoside hydrolase
LDIMBGKD_01494 0.0 frc 2.8.3.15, 2.8.3.16 - C ko:K07544,ko:K07749 ko00623,ko01100,ko01120,ko01220,map00623,map01100,map01120,map01220 ko00000,ko00001,ko00002,ko01000 Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
LDIMBGKD_01495 5.8e-275 - 3.2.1.78 GH26 G ko:K01218 ko00051,ko02024,map00051,map02024 ko00000,ko00001,ko01000 hydrolase family 5
LDIMBGKD_01496 5.91e-222 - - - S ko:K07088 - ko00000 Membrane transport protein
LDIMBGKD_01497 0.0 oxc 4.1.1.8 - EH ko:K01577 ko00630,ko01100,map00630,map01100 ko00000,ko00001,ko01000 Thiamine pyrophosphate enzyme, central domain
LDIMBGKD_01498 0.0 - - - P - - - Voltage gated chloride channel
LDIMBGKD_01499 0.0 - - - M ko:K13735 ko05100,map05100 ko00000,ko00001 domain protein
LDIMBGKD_01500 0.0 - - - K - - - RNA polymerase II activating transcription factor binding
LDIMBGKD_01501 0.0 glgE 2.4.99.16 GH13 G ko:K16147 ko00500,ko01100,map00500,map01100 ko00000,ko00001,ko01000 Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1- 4)- glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB
LDIMBGKD_01502 3.01e-120 ppa 3.6.1.1 - C ko:K01507 ko00190,map00190 ko00000,ko00001,ko01000 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
LDIMBGKD_01503 1.75e-194 - - - - - - - -
LDIMBGKD_01504 1.67e-191 glnR - - KT - - - Transcriptional regulatory protein, C terminal
LDIMBGKD_01505 4.39e-178 nth 4.2.99.18 - L ko:K10773 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
LDIMBGKD_01506 0.0 - - - E ko:K02035 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 Bacterial extracellular solute-binding proteins, family 5 Middle
LDIMBGKD_01507 0.0 valS 6.1.1.9 - J ko:K01873 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
LDIMBGKD_01508 1e-135 lrp_3 - - K ko:K03719 - ko00000,ko03000,ko03036 helix_turn_helix ASNC type
LDIMBGKD_01509 1.91e-83 tyrA 5.4.99.5 - E ko:K04092 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Chorismate mutase type II
LDIMBGKD_01510 0.0 - - - S - - - domain protein
LDIMBGKD_01511 0.0 rho - - K ko:K03628 ko03018,map03018 ko00000,ko00001,ko03019,ko03021 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
LDIMBGKD_01512 0.0 - - - H - - - Flavin containing amine oxidoreductase
LDIMBGKD_01513 1.87e-68 - - - S - - - Protein of unknown function (DUF2469)
LDIMBGKD_01514 2.96e-251 - - - J - - - Acetyltransferase (GNAT) domain
LDIMBGKD_01515 0.0 gatB 6.3.5.6, 6.3.5.7 - J ko:K02434 ko00970,ko01100,map00970,map01100 ko00000,ko00001,ko01000,ko03029 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
LDIMBGKD_01516 0.0 gatA 6.3.5.6, 6.3.5.7 - F ko:K02433 ko00970,ko01100,map00970,map01100 ko00000,ko00001,ko01000,ko03029 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
LDIMBGKD_01517 4.42e-34 gatC 6.3.5.6, 6.3.5.7 - J ko:K02435 ko00970,ko01100,map00970,map01100 ko00000,ko00001,ko01000,ko03029 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
LDIMBGKD_01518 5.71e-196 - - - S - - - ABC-type transport system involved in multi-copper enzyme maturation permease component
LDIMBGKD_01519 9.26e-175 - - - V ko:K01990 - ko00000,ko00002,ko02000 ABC transporter
LDIMBGKD_01520 7.48e-194 trmH 2.1.1.34 - J ko:K00556 - ko00000,ko01000,ko03016 RNA methyltransferase TrmH family
LDIMBGKD_01521 6.33e-148 pyrE1 - - F - - - Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
LDIMBGKD_01522 0.0 - - - P - - - E1-E2 ATPase
LDIMBGKD_01523 0.0 clpB - - O ko:K03695,ko:K03696 ko01100,ko04213,map01100,map04213 ko00000,ko00001,ko03110 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
LDIMBGKD_01524 1.09e-200 - - - Q - - - Fumarylacetoacetate (FAA) hydrolase family
LDIMBGKD_01525 1.78e-106 - - - - - - - -
LDIMBGKD_01526 3.78e-96 - - - M - - - domain protein
LDIMBGKD_01527 2.58e-114 - - - Q - - - von Willebrand factor (vWF) type A domain
LDIMBGKD_01528 7.52e-239 - 3.4.22.70 - M ko:K07284 - ko00000,ko01000,ko01002,ko01011 Sortase family
LDIMBGKD_01529 3.82e-193 - - - S ko:K06997 - ko00000 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
LDIMBGKD_01530 1.1e-252 gluQ 6.1.1.17 - J ko:K01885 ko00860,ko00970,ko01100,ko01110,ko01120,map00860,map00970,map01100,map01110,map01120 ko00000,ko00001,ko00002,ko01000,ko01007,ko02048,ko03016 Belongs to the class-I aminoacyl-tRNA synthetase family
LDIMBGKD_01531 5e-42 - - - M - - - Protein of unknown function (DUF3152)
LDIMBGKD_01532 7.69e-170 glpF - - U ko:K02440 - ko00000,ko02000 Belongs to the MIP aquaporin (TC 1.A.8) family
LDIMBGKD_01536 5.35e-171 - - - T - - - Pfam Adenylate and Guanylate cyclase catalytic domain
LDIMBGKD_01537 3.61e-96 rplI - - J ko:K02939 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds to the 23S rRNA
LDIMBGKD_01538 1.06e-48 rpsR - - J ko:K02963 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
LDIMBGKD_01539 1.77e-124 ssb - - L ko:K03111 ko03030,ko03430,ko03440,map03030,map03430,map03440 ko00000,ko00001,ko03029,ko03032,ko03400 Single-stranded DNA-binding protein
LDIMBGKD_01540 5.36e-64 rpsF - - J ko:K02990 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011,ko03029 Binds together with S18 to 16S ribosomal RNA
LDIMBGKD_01541 8.13e-244 prs 2.7.6.1 - F ko:K00948 ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
LDIMBGKD_01542 9.03e-223 rbsK 2.7.1.15 - H ko:K00852 ko00030,map00030 ko00000,ko00001,ko01000 Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LDIMBGKD_01543 0.0 - - - EGP ko:K08168 - ko00000,ko00002,ko01504,ko02000 Major Facilitator Superfamily
LDIMBGKD_01544 3.76e-218 iunH2 3.2.2.1 - F ko:K01239 ko00230,ko00760,ko01100,map00230,map00760,map01100 ko00000,ko00001,ko01000 Inosine-uridine preferring nucleoside hydrolase
LDIMBGKD_01545 2.73e-172 - - - K ko:K02529 - ko00000,ko03000 helix_turn _helix lactose operon repressor
LDIMBGKD_01546 4.65e-51 - - - K ko:K02529 - ko00000,ko03000 helix_turn _helix lactose operon repressor
LDIMBGKD_01548 2.53e-10 - - - - - - - -
LDIMBGKD_01549 8.8e-295 glf 5.4.99.9 - M ko:K01854 ko00052,ko00520,map00052,map00520 ko00000,ko00001,ko01000 UDP-galactopyranose mutase
LDIMBGKD_01550 1.52e-262 amsE - - M - - - Glycosyl transferase family 2
LDIMBGKD_01552 4.09e-250 - - - S - - - Glycosyltransferase, group 2 family protein
LDIMBGKD_01553 0.0 - - - M - - - Psort location CytoplasmicMembrane, score 9.26
LDIMBGKD_01554 0.0 - - - M - - - Psort location CytoplasmicMembrane, score 9.26
LDIMBGKD_01555 0.0 glfT 2.4.1.288 GT2 S ko:K16650 - ko00000,ko01000,ko01003 Glycosyltransferase like family 2
LDIMBGKD_01556 1.08e-216 - - - M - - - Glycosyl hydrolases family 25
LDIMBGKD_01559 2.95e-285 - - - GM ko:K01990 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
LDIMBGKD_01560 9.35e-193 tagG - - U ko:K01992 - ko00000,ko00002,ko02000 Transport permease protein
LDIMBGKD_01561 0.0 - - - S - - - Glycosyltransferase like family 2
LDIMBGKD_01563 0.0 - - - M - - - 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
LDIMBGKD_01564 0.0 - - - M - - - 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
LDIMBGKD_01565 1.09e-26 - - - M - - - Excalibur calcium-binding domain
LDIMBGKD_01566 0.0 - - - S - - - Psort location Cytoplasmic, score 8.87
LDIMBGKD_01567 1.31e-315 - - - V - - - ABC transporter permease
LDIMBGKD_01568 1.54e-247 - - - V ko:K02003 - ko00000,ko00002,ko02000 ABC transporter
LDIMBGKD_01569 1.91e-193 - - - T ko:K06950 - ko00000 HD domain
LDIMBGKD_01570 1.17e-217 - - - S - - - Glutamine amidotransferase domain
LDIMBGKD_01571 0.0 kup - - P ko:K03549 - ko00000,ko02000 Transport of potassium into the cell
LDIMBGKD_01572 1.7e-235 tatD - - L ko:K03424 - ko00000,ko01000 TatD related DNase
LDIMBGKD_01573 0.0 - 3.2.1.22 - G ko:K07407 ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score 8.87
LDIMBGKD_01574 6.89e-166 - - - - - - - -
LDIMBGKD_01575 0.0 - - - V ko:K06147 - ko00000,ko02000 ABC transporter
LDIMBGKD_01576 0.0 - - - V ko:K06147 - ko00000,ko02000 ABC transporter
LDIMBGKD_01577 0.0 metG 6.1.1.10 - J ko:K01874 ko00450,ko00970,map00450,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
LDIMBGKD_01578 4.74e-166 - - - - - - - -
LDIMBGKD_01579 1.51e-60 - - - - - - - -
LDIMBGKD_01580 3.49e-221 rsmI 2.1.1.198 - H ko:K07056 - ko00000,ko01000,ko03009 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
LDIMBGKD_01581 0.0 pmt 2.4.1.109 GT39 O ko:K00728 ko00514,ko00515,ko01100,map00514,map00515,map01100 ko00000,ko00001,ko01000,ko01003 C-terminal four TMM region of protein-O-mannosyltransferase
LDIMBGKD_01582 8.13e-200 - - - I - - - alpha/beta hydrolase fold
LDIMBGKD_01583 2.12e-174 dedA1 - - S ko:K03975 - ko00000 SNARE associated Golgi protein
LDIMBGKD_01585 7.86e-175 - - - S - - - GyrI-like small molecule binding domain
LDIMBGKD_01586 0.0 bgl2 3.2.1.21 GH3 G ko:K05349 ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110 ko00000,ko00001,ko01000 Fibronectin type III-like domain
LDIMBGKD_01587 2.73e-145 - - - K - - - Bacterial regulatory proteins, tetR family
LDIMBGKD_01588 1.2e-166 - - - S - - - HAD hydrolase, family IA, variant 3
LDIMBGKD_01589 1.43e-119 hspR - - K ko:K13640 - ko00000,ko03000 transcriptional regulator, MerR family
LDIMBGKD_01590 5.68e-237 dnaJ - - O ko:K03686,ko:K05516 - ko00000,ko03029,ko03036,ko03110 DnaJ molecular chaperone homology domain
LDIMBGKD_01591 1.79e-131 grpE - - O ko:K03687 - ko00000,ko03029,ko03110 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
LDIMBGKD_01592 0.0 dnaK - - O ko:K04043 ko03018,ko04212,ko05152,map03018,map04212,map05152 ko00000,ko00001,ko03019,ko03029,ko03110,ko04147 Heat shock 70 kDa protein
LDIMBGKD_01594 6.51e-247 - - - K - - - Psort location Cytoplasmic, score
LDIMBGKD_01595 8.73e-187 traX - - S - - - TraX protein
LDIMBGKD_01596 1.55e-190 - - - S ko:K07025 - ko00000 HAD-hyrolase-like
LDIMBGKD_01597 0.0 apuB 3.2.1.41, 3.2.1.68 CBM48,GH13 G ko:K01200,ko:K01214 ko00500,ko01100,ko01110,map00500,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Belongs to the glycosyl hydrolase 13 family
LDIMBGKD_01598 2.29e-226 malG - - G ko:K15772 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
LDIMBGKD_01599 0.0 malC - - G ko:K15771 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
LDIMBGKD_01600 5.8e-303 malE - - G ko:K15770 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Bacterial extracellular solute-binding protein
LDIMBGKD_01601 0.0 malL 2.4.1.4, 3.2.1.1, 3.2.1.20, 5.4.99.16 GH13,GH31 G ko:K01187,ko:K05341,ko:K05343 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 Alpha-amylase domain
LDIMBGKD_01602 0.0 malQ 2.4.1.25 GH77 G ko:K00705 ko00500,ko01100,map00500,map01100 ko00000,ko00001,ko01000 4-alpha-glucanotransferase
LDIMBGKD_01603 3.35e-140 - - - S - - - Protein of unknown function, DUF624
LDIMBGKD_01604 1.39e-196 - - - G ko:K02026,ko:K10119 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter permease
LDIMBGKD_01605 1.1e-199 msmF - - G ko:K10118 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
LDIMBGKD_01606 4.41e-232 - - - K - - - Psort location Cytoplasmic, score
LDIMBGKD_01607 0.0 amyE - - G ko:K10117 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Bacterial extracellular solute-binding protein
LDIMBGKD_01608 0.0 - 3.2.1.20 GH31 G ko:K01187 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 Alpha-amylase domain
LDIMBGKD_01609 1.4e-148 gpm2 3.1.3.73 - G ko:K02226 ko00860,ko01100,map00860,map01100 ko00000,ko00001,ko00002,ko01000 Phosphoglycerate mutase family
LDIMBGKD_01610 4.02e-89 - - - S - - - Protein of unknown function (DUF4235)
LDIMBGKD_01611 1.44e-181 nfrA - - C - - - Nitroreductase family
LDIMBGKD_01612 4.78e-59 - - - - - - - -
LDIMBGKD_01613 8.29e-60 iolT - - EGP - - - Major facilitator Superfamily
LDIMBGKD_01614 2.09e-43 iolT - - EGP - - - Major facilitator Superfamily
LDIMBGKD_01615 2.53e-10 - - - - - - - -
LDIMBGKD_01616 6.08e-126 nadE 6.3.5.1 - H ko:K01950 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
LDIMBGKD_01617 0.0 nadE 6.3.5.1 - H ko:K01950 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
LDIMBGKD_01618 1.24e-55 - - - L ko:K07473 - ko00000,ko02048 RelB antitoxin
LDIMBGKD_01620 0.000285 - - - S - - - ORF located using Blastx
LDIMBGKD_01622 0.0 - - - G ko:K03292 - ko00000 Psort location CytoplasmicMembrane, score 10.00
LDIMBGKD_01623 0.0 - 3.2.1.185 GH127 S ko:K09955,ko:K18205 - ko00000,ko01000 Beta-L-arabinofuranosidase, GH127
LDIMBGKD_01624 2.37e-245 - - - K ko:K02529 - ko00000,ko03000 Periplasmic binding protein domain
LDIMBGKD_01625 1.84e-185 cobB2 - - K ko:K12410 - ko00000,ko01000 Sir2 family
LDIMBGKD_01626 1.43e-284 ilvA 4.3.1.19 - E ko:K01754 ko00260,ko00290,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00290,map01100,map01110,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Pyridoxal-phosphate dependent enzyme
LDIMBGKD_01627 0.0 - 3.2.1.10 GH13 G ko:K01182 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 Alpha amylase, catalytic domain protein
LDIMBGKD_01630 7.96e-237 - - - K - - - Psort location Cytoplasmic, score
LDIMBGKD_01631 0.0 - - - G - - - Raffinose synthase or seed imbibition protein Sip1
LDIMBGKD_01632 3.43e-206 - - - G ko:K10119 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
LDIMBGKD_01633 1.35e-238 - - - G ko:K10118 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
LDIMBGKD_01634 2.8e-93 - - - G ko:K10117 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Bacterial extracellular solute-binding protein
LDIMBGKD_01636 2.57e-297 - - - GK - - - ROK family
LDIMBGKD_01637 0.0 - 3.2.1.22 - G ko:K07407 ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603 ko00000,ko00001,ko01000 Glycosyl hydrolase family 36 N-terminal domain
LDIMBGKD_01638 4.78e-110 tadA 3.5.4.1, 3.5.4.33 - FJ ko:K01485,ko:K11991 ko00240,ko00330,ko01100,map00240,map00330,map01100 ko00000,ko00001,ko01000,ko03016 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
LDIMBGKD_01639 0.0 nhaP - - P ko:K03316 - ko00000 Sodium/hydrogen exchanger family
LDIMBGKD_01640 3.82e-232 - - - S ko:K06999 - ko00000 Phospholipase/Carboxylesterase
LDIMBGKD_01641 3.64e-248 - - - D - - - nuclear chromosome segregation
LDIMBGKD_01642 5.78e-143 dcd 3.5.4.13 - F ko:K01494 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the dCTP deaminase family
LDIMBGKD_01643 0.0 pacL2 3.6.3.8 - P ko:K01537 - ko00000,ko01000 Cation transporter/ATPase, N-terminus
LDIMBGKD_01644 2.87e-148 pacL2 3.6.3.8 - P ko:K01537 - ko00000,ko01000 Cation transporter/ATPase, N-terminus
LDIMBGKD_01645 3.62e-223 rlmB 2.1.1.185 - J ko:K03218 - ko00000,ko01000,ko03009 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
LDIMBGKD_01646 4.45e-156 merA 1.16.1.1 - C ko:K00520,ko:K21739 - ko00000,ko01000 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
LDIMBGKD_01647 0.0 - - - KLT - - - Domain of unknown function (DUF4032)
LDIMBGKD_01648 7.32e-269 ugpC - - E ko:K10112 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Belongs to the ABC transporter superfamily
LDIMBGKD_01649 3.7e-239 - - - U ko:K10716 - ko00000,ko02000 Ion channel
LDIMBGKD_01650 0.0 - - - KLT - - - Protein tyrosine kinase
LDIMBGKD_01651 1.74e-113 - - - O - - - Thioredoxin
LDIMBGKD_01653 2.01e-284 rpfB - - S ko:K21688 - ko00000 G5
LDIMBGKD_01654 1.13e-208 ksgA 2.1.1.182 - J ko:K02528 - ko00000,ko01000,ko03009 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
LDIMBGKD_01655 1.44e-227 ispE 2.7.1.148 - F ko:K00919 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
LDIMBGKD_01656 1.51e-145 - - - S - - - LytR cell envelope-related transcriptional attenuator
LDIMBGKD_01657 0.0 pcnA 2.7.7.19, 2.7.7.72 - J ko:K00970,ko:K00974 ko03013,ko03018,map03013,map03018 ko00000,ko00001,ko01000,ko03016,ko03019 Probable RNA and SrmB- binding site of polymerase A
LDIMBGKD_01658 1.77e-238 mutT4 - - L - - - Belongs to the Nudix hydrolase family
LDIMBGKD_01659 0.0 - - - - - - - -
LDIMBGKD_01660 0.0 mviN - - KLT ko:K03980 - ko00000,ko01011,ko02000 MviN-like protein
LDIMBGKD_01661 2.29e-228 trxB 1.8.1.9 - C ko:K00384 ko00450,map00450 ko00000,ko00001,ko01000 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
LDIMBGKD_01662 1.8e-316 parB - - K ko:K03497 - ko00000,ko03000,ko03036,ko04812 Belongs to the ParB family
LDIMBGKD_01663 2.2e-225 parA - - D ko:K03496 - ko00000,ko03036,ko04812 CobQ CobB MinD ParA nucleotide binding domain protein
LDIMBGKD_01664 1.82e-174 rsmG 2.1.1.170 - J ko:K03501 - ko00000,ko01000,ko03009,ko03036 Specifically methylates the N7 position of a guanine in 16S rRNA
LDIMBGKD_01665 4.13e-122 jag - - S ko:K06346 - ko00000 Putative single-stranded nucleic acids-binding domain
LDIMBGKD_01666 8.06e-234 yidC - - U ko:K03217 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044,ko03029 Membrane protein insertase, YidC Oxa1 family
LDIMBGKD_01667 9.33e-20 rpmH - - J ko:K02914 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL34 family

eggNOG-mapper v2.1.12 (Database: eggNOG v5.0.2, Mar. 2021 release)