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ORF_ID	e_value	Gene_name	EC_number	CAZy	COGs	KEGG_ko	KEGG_Pathway	BRITE	Description
LIMCCEJA_00001	8.55e-99	-	-	-	K	-	-	-	DNA-binding transcription factor activity
LIMCCEJA_00002	2.11e-54	-	-	-	K	-	-	-	Transcriptional regulator, LysR family
LIMCCEJA_00003	0.0	ebgA	3.2.1.23	-	G	ko:K01190,ko:K12111	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 2 family
LIMCCEJA_00004	0.0	-	-	-	E	-	-	-	Amino Acid
LIMCCEJA_00005	0.0	lysP	-	-	E	ko:K03293,ko:K11733	-	ko00000,ko02000	amino acid
LIMCCEJA_00006	3.34e-209	-	-	-	K	-	-	-	helix_turn_helix, arabinose operon control protein
LIMCCEJA_00007	0.0	-	-	-	GK	-	-	-	helix_turn_helix, arabinose operon control protein
LIMCCEJA_00008	7.02e-269	-	-	-	G	-	-	-	Major Facilitator Superfamily
LIMCCEJA_00009	0.0	-	-	-	S	ko:K12941	-	ko00000,ko01002	Peptidase dimerisation domain
LIMCCEJA_00010	2.39e-255	-	1.5.1.28	-	C	ko:K04940	-	ko00000,ko01000	NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain
LIMCCEJA_00011	5.87e-172	yxeO	-	-	E	ko:K16960,ko:K16963	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter
LIMCCEJA_00012	1.07e-209	-	-	-	ET	ko:K16957	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial periplasmic substrate-binding proteins
LIMCCEJA_00013	5.19e-148	ytmL	-	-	P	ko:K16958,ko:K16959	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
LIMCCEJA_00014	9.72e-156	-	-	-	P	ko:K16958	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
LIMCCEJA_00015	3.15e-174	-	-	-	-	-	-	-	-
LIMCCEJA_00018	4.39e-25	-	-	-	S	-	-	-	YvrJ protein family
LIMCCEJA_00019	1.02e-188	-	-	-	M	-	-	-	hydrolase, family 25
LIMCCEJA_00020	1.17e-35	tcaA	-	-	S	ko:K21463	-	ko00000	response to antibiotic
LIMCCEJA_00021	6.48e-115	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
LIMCCEJA_00022	3.29e-237	yxeA	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter permease
LIMCCEJA_00023	2.12e-155	lolD	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
LIMCCEJA_00024	0.0	npr	1.11.1.1	-	C	ko:K05910	-	ko00000,ko01000	NADH oxidase
LIMCCEJA_00025	1.58e-195	-	-	-	S	-	-	-	hydrolase
LIMCCEJA_00026	8.23e-61	-	-	-	S	ko:K19157	-	ko00000,ko01000,ko02048	Bacterial toxin of type II toxin-antitoxin system, YafQ
LIMCCEJA_00027	9.06e-183	ant1	2.7.7.47	-	H	ko:K00984	-	ko00000,ko01000,ko01504	Mediates bacterial resistance to the antibiotics streptomycin and spectomycin
LIMCCEJA_00035	0.0	-	-	-	L	-	-	-	Transposase DDE domain
LIMCCEJA_00036	4.66e-196	metQ1	-	-	P	ko:K02073	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the nlpA lipoprotein family
LIMCCEJA_00037	9.68e-252	-	3.5.1.24	-	M	ko:K01442	ko00120,ko00121,ko01100,map00120,map00121,map01100	ko00000,ko00001,ko01000	Linear amide C-N hydrolases, choloylglycine hydrolase family
LIMCCEJA_00038	1.01e-224	-	-	-	-	-	-	-	-
LIMCCEJA_00039	0.0	l1n	4.2.1.53	-	S	ko:K10254	-	ko00000,ko01000	Myosin-crossreactive antigen
LIMCCEJA_00040	1.61e-24	-	-	-	-	-	-	-	-
LIMCCEJA_00041	1.18e-134	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
LIMCCEJA_00042	1.22e-77	dhaM	2.7.1.121	-	S	ko:K05881	ko00561,map00561	ko00000,ko00001,ko01000,ko02000	PTS system fructose IIA component
LIMCCEJA_00043	1.72e-134	dhaL	2.7.1.121	-	S	ko:K05879	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Dak2
LIMCCEJA_00044	1.47e-242	dhaK	2.7.1.121	-	G	ko:K05878	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Dak1 domain
LIMCCEJA_00045	2.13e-101	-	-	-	O	-	-	-	OsmC-like protein
LIMCCEJA_00046	1.28e-155	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
LIMCCEJA_00047	4.74e-267	-	-	-	-	-	-	-	-
LIMCCEJA_00049	1.96e-189	-	-	-	K	-	-	-	Helix-turn-helix domain
LIMCCEJA_00050	0.0	-	-	-	L	-	-	-	Exonuclease
LIMCCEJA_00051	1.6e-58	-	-	-	L	-	-	-	RelB antitoxin
LIMCCEJA_00052	1.04e-64	yczG	-	-	K	-	-	-	Helix-turn-helix domain
LIMCCEJA_00053	4.89e-263	yceJ	-	-	EGP	ko:K08221	-	ko00000,ko02000	transporter
LIMCCEJA_00054	2.37e-140	tag	3.2.2.20	-	L	ko:K01246	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	glycosylase
LIMCCEJA_00055	3.42e-45	-	-	-	-	-	-	-	-
LIMCCEJA_00056	7.61e-215	fba	4.1.2.13, 4.1.2.29	-	G	ko:K01624,ko:K03339	ko00010,ko00030,ko00051,ko00562,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00562,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Fructose-1,6-bisphosphate aldolase, class II
LIMCCEJA_00057	0.0	cidC	1.2.3.3	-	EH	ko:K00158	ko00620,ko01100,map00620,map01100	ko00000,ko00001,ko01000	Belongs to the TPP enzyme family
LIMCCEJA_00058	1.01e-61	-	-	-	-	-	-	-	-
LIMCCEJA_00059	8.69e-92	pbpX	-	-	V	-	-	-	Beta-lactamase
LIMCCEJA_00060	6.29e-135	pbpE	-	-	V	-	-	-	Beta-lactamase
LIMCCEJA_00061	1e-248	ykfB	5.1.1.20	-	M	ko:K19802	-	ko00000,ko01000	Belongs to the mandelate racemase muconate lactonizing enzyme family
LIMCCEJA_00062	1.46e-183	-	-	-	H	-	-	-	Protein of unknown function (DUF1698)
LIMCCEJA_00064	4.01e-184	puuD	-	-	S	ko:K07010	-	ko00000,ko01002	peptidase C26
LIMCCEJA_00066	0.0	-	6.3.1.2	-	E	ko:K01915	ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727	ko00000,ko00001,ko01000,ko04147	Glutamine synthetase N-terminal domain
LIMCCEJA_00067	6.98e-289	-	-	-	S	ko:K07045	-	ko00000	Amidohydrolase
LIMCCEJA_00068	0.0	-	-	-	E	-	-	-	Amino acid permease
LIMCCEJA_00070	7.73e-99	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
LIMCCEJA_00071	2.26e-209	-	-	-	S	-	-	-	reductase
LIMCCEJA_00072	3.95e-252	qor	1.1.1.1, 1.6.5.5	-	C	ko:K00001,ko:K00344	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily
LIMCCEJA_00073	9.54e-78	ydeP	-	-	K	-	-	-	Transcriptional regulator, HxlR family
LIMCCEJA_00074	3.91e-166	-	-	-	S	ko:K07090	-	ko00000	membrane transporter protein
LIMCCEJA_00075	7.2e-261	-	-	-	-	-	-	-	-
LIMCCEJA_00076	1.49e-167	XK27_12140	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
LIMCCEJA_00077	0.0	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
LIMCCEJA_00078	4.87e-164	-	-	-	K	ko:K20488	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko02022	Transcriptional regulatory protein, C terminal
LIMCCEJA_00079	1.15e-259	-	2.7.13.3	-	T	ko:K20487	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
LIMCCEJA_00080	9.17e-210	-	-	-	V	-	-	-	ATPases associated with a variety of cellular activities
LIMCCEJA_00081	2.5e-259	-	-	-	-	ko:K01992	-	ko00000,ko00002,ko02000	-
LIMCCEJA_00082	2.22e-138	-	-	-	-	-	-	-	-
LIMCCEJA_00084	0.0	pepN	3.4.11.2	-	E	ko:K01256	ko00480,ko01100,map00480,map01100	ko00000,ko00001,ko01000,ko01002	aminopeptidase
LIMCCEJA_00085	0.0	ycaM	-	-	E	-	-	-	amino acid
LIMCCEJA_00086	3.85e-314	xylP	-	-	G	-	-	-	MFS/sugar transport protein
LIMCCEJA_00087	1.66e-121	-	-	-	S	ko:K08996	-	ko00000	Protein of unknown function (DUF1440)
LIMCCEJA_00088	2.45e-213	-	-	-	K	-	-	-	Transcriptional regulator, LysR family
LIMCCEJA_00089	1.04e-214	-	-	-	G	-	-	-	Xylose isomerase-like TIM barrel
LIMCCEJA_00090	4.69e-199	-	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Enoyl-(Acyl carrier protein) reductase
LIMCCEJA_00091	3.88e-206	aroE	1.1.1.25	-	E	ko:K00014	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
LIMCCEJA_00093	4.17e-280	-	-	-	EGP	-	-	-	Major Facilitator Superfamily
LIMCCEJA_00094	9.58e-214	aroE	1.1.1.25	-	E	ko:K00014	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
LIMCCEJA_00095	2.35e-209	metA	2.3.1.46	-	E	ko:K00651	ko00270,ko00920,ko01100,ko01110,ko01230,map00270,map00920,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Transfers an acetyl group from acetyl-CoA to
LIMCCEJA_00096	4.43e-222	cysK	2.5.1.47	-	E	ko:K01738	ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the cysteine synthase cystathionine beta- synthase family
LIMCCEJA_00098	4.85e-184	-	-	-	-	-	-	-	-
LIMCCEJA_00100	3.66e-274	mccB	4.4.1.1, 4.4.1.2, 4.4.1.8	-	E	ko:K01760,ko:K17217	ko00260,ko00270,ko00450,ko00920,ko01100,ko01110,ko01130,ko01230,map00260,map00270,map00450,map00920,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	cystathionine
LIMCCEJA_00101	2.39e-186	tcyA	-	-	ET	ko:K02424	ko02010,map02010	ko00000,ko00001,ko00002,ko02000,ko02035	Belongs to the bacterial solute-binding protein 3 family
LIMCCEJA_00102	1.66e-156	tcyB	-	-	E	ko:K10009	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
LIMCCEJA_00103	1.8e-181	-	-	-	-	-	-	-	-
LIMCCEJA_00104	0.0	brnQ	-	-	U	ko:K03311	-	ko00000	Component of the transport system for branched-chain amino acids
LIMCCEJA_00105	7.7e-149	-	-	-	S	-	-	-	WxL domain surface cell wall-binding
LIMCCEJA_00106	1.82e-232	-	-	-	S	-	-	-	Cell surface protein
LIMCCEJA_00107	8.36e-74	-	-	-	-	-	-	-	-
LIMCCEJA_00108	0.0	-	-	-	S	-	-	-	Leucine-rich repeat (LRR) protein
LIMCCEJA_00109	1.74e-163	-	-	-	S	-	-	-	WxL domain surface cell wall-binding
LIMCCEJA_00110	1.58e-83	-	-	-	-	-	-	-	-
LIMCCEJA_00111	2.69e-158	-	-	-	N	-	-	-	WxL domain surface cell wall-binding
LIMCCEJA_00112	0.0	-	-	-	S	-	-	-	Leucine-rich repeat (LRR) protein
LIMCCEJA_00113	1.87e-215	yicL	-	-	EG	-	-	-	EamA-like transporter family
LIMCCEJA_00114	0.0	-	-	-	-	-	-	-	-
LIMCCEJA_00115	6.61e-186	CcmA5	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter
LIMCCEJA_00116	4.22e-92	-	-	-	S	-	-	-	ECF-type riboflavin transporter, S component
LIMCCEJA_00117	5.24e-192	pdxK	2.7.1.35	-	H	ko:K00868	ko00750,ko01100,map00750,map01100	ko00000,ko00001,ko01000	Phosphomethylpyrimidine kinase
LIMCCEJA_00118	3.21e-210	metF	1.5.1.20	-	C	ko:K00297	ko00670,ko00720,ko01100,ko01120,ko01200,ko01523,map00670,map00720,map01100,map01120,map01200,map01523	ko00000,ko00001,ko00002,ko01000	Methylenetetrahydrofolate reductase
LIMCCEJA_00119	0.0	metE	2.1.1.14	-	E	ko:K00549	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
LIMCCEJA_00121	0.0	XK27_09600	-	-	V	ko:K06147,ko:K18891	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter, ATP-binding protein
LIMCCEJA_00122	0.0	-	-	-	V	ko:K06147,ko:K18892	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
LIMCCEJA_00123	8.8e-283	oxlT	-	-	P	ko:K08177	-	ko00000,ko02000	Major Facilitator Superfamily
LIMCCEJA_00124	1.56e-166	treR	-	-	K	ko:K03486	-	ko00000,ko03000	UTRA
LIMCCEJA_00125	0.0	treC	3.2.1.93	GH13	G	ko:K01226	ko00500,map00500	ko00000,ko00001,ko01000	Alpha amylase, catalytic domain protein
LIMCCEJA_00126	0.0	treB	-	-	G	ko:K02755,ko:K02756,ko:K02757	ko02060,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
LIMCCEJA_00127	1.6e-275	sstT	-	-	U	ko:K07862	-	ko00000,ko02000	Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
LIMCCEJA_00128	0.0	-	-	-	E	ko:K03294	-	ko00000	Amino Acid
LIMCCEJA_00130	1.61e-221	ldh	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	lactate/malate dehydrogenase, alpha/beta C-terminal domain
LIMCCEJA_00131	0.0	gdhA	1.4.1.4	-	E	ko:K00262	ko00220,ko00250,ko00910,ko01100,map00220,map00250,map00910,map01100	ko00000,ko00001,ko01000	Belongs to the Glu Leu Phe Val dehydrogenases family
LIMCCEJA_00132	3.08e-43	cspA	-	-	K	ko:K03704	-	ko00000,ko03000	'Cold-shock' DNA-binding domain
LIMCCEJA_00133	1.55e-94	-	-	-	-	-	-	-	-
LIMCCEJA_00134	1.95e-99	-	-	-	O	-	-	-	OsmC-like protein
LIMCCEJA_00135	0.0	yjcA	-	-	S	ko:K19350	ko02010,map02010	ko00000,ko00001,ko01504,ko02000	ABC transporter
LIMCCEJA_00136	2.84e-149	ylbE	-	-	GM	-	-	-	NAD(P)H-binding
LIMCCEJA_00137	1.41e-204	-	-	-	S	-	-	-	Aldo/keto reductase family
LIMCCEJA_00138	0.0	yifK	-	-	E	ko:K03293	-	ko00000	Amino acid permease
LIMCCEJA_00139	0.0	-	-	-	S	-	-	-	Protein of unknown function (DUF3800)
LIMCCEJA_00140	0.0	nhaK	-	-	P	ko:K03316	-	ko00000	Sodium proton antiporter
LIMCCEJA_00141	4.03e-80	-	-	-	S	-	-	-	Protein of unknown function (DUF3021)
LIMCCEJA_00142	1.2e-95	-	-	-	K	-	-	-	LytTr DNA-binding domain
LIMCCEJA_00143	1.14e-193	-	-	-	V	ko:K11051	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC-2 type transporter
LIMCCEJA_00144	4.35e-207	-	-	-	V	ko:K01990,ko:K11050	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
LIMCCEJA_00145	8.08e-189	-	-	-	S	-	-	-	Alpha/beta hydrolase of unknown function (DUF915)
LIMCCEJA_00146	6.19e-152	cah	4.2.1.1	-	P	ko:K01674	ko00910,map00910	ko00000,ko00001,ko01000	Eukaryotic-type carbonic anhydrase
LIMCCEJA_00147	1.06e-69	ybjQ	-	-	S	-	-	-	Belongs to the UPF0145 family
LIMCCEJA_00148	7.57e-124	-	3.6.1.22	-	L	ko:K03426	ko00760,ko01100,ko04146,map00760,map01100,map04146	ko00000,ko00001,ko01000	NUDIX domain
LIMCCEJA_00149	1.27e-154	-	-	-	K	-	-	-	response regulator
LIMCCEJA_00150	1.59e-212	ycbM	-	-	T	-	-	-	Histidine kinase
LIMCCEJA_00151	2.75e-214	-	-	-	V	ko:K01990,ko:K20490	ko02010,ko02020,ko02024,map02010,map02020,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, ATP-binding protein
LIMCCEJA_00152	5.78e-148	-	-	-	S	-	-	-	ABC-2 family transporter protein
LIMCCEJA_00153	8.8e-210	-	-	-	C	-	-	-	nadph quinone reductase
LIMCCEJA_00154	5.66e-313	amt	-	-	P	ko:K03320	-	ko00000,ko02000	ammonium transporter
LIMCCEJA_00155	1.97e-227	ywbN	-	-	P	ko:K07223,ko:K16301	-	ko00000,ko01000,ko02000	Peroxidase
LIMCCEJA_00156	2.7e-154	yqgG	-	-	S	ko:K07507	-	ko00000,ko02000	MgtC family
LIMCCEJA_00157	1.51e-195	endA	-	-	F	ko:K15051	-	ko00000	DNA RNA non-specific endonuclease
LIMCCEJA_00159	9.67e-21	-	-	-	-	-	-	-	-
LIMCCEJA_00160	0.0	ykpA	-	-	S	-	-	-	ABC transporter, ATP-binding protein
LIMCCEJA_00161	2.39e-185	-	-	-	L	-	-	-	ATPase domain of DNA mismatch repair MUTS family
LIMCCEJA_00162	4.42e-202	-	-	-	L	-	-	-	ATPase domain of DNA mismatch repair MUTS family
LIMCCEJA_00163	2.67e-147	ung2	-	-	L	-	-	-	Uracil-DNA glycosylase
LIMCCEJA_00164	2.82e-172	glpF	-	-	U	ko:K02440	-	ko00000,ko02000	Belongs to the MIP aquaporin (TC 1.A.8) family
LIMCCEJA_00165	0.0	glpD	1.1.3.21, 1.1.5.3	-	C	ko:K00105,ko:K00111	ko00564,ko01110,map00564,map01110	ko00000,ko00001,ko01000	C-terminal domain of alpha-glycerophosphate oxidase
LIMCCEJA_00166	0.0	glpK	2.7.1.30	-	F	ko:K00864	ko00561,ko01100,ko03320,ko04626,map00561,map01100,map03320,map04626	ko00000,ko00001,ko01000,ko04147	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
LIMCCEJA_00167	4.68e-179	epsG	-	-	M	-	-	-	Glycosyltransferase like family 2
LIMCCEJA_00169	2.12e-09	lacT	-	-	K	ko:K02531	-	ko00000,ko03000	PRD domain
LIMCCEJA_00170	3.54e-180	lacT	-	-	K	ko:K02531	-	ko00000,ko03000	PRD domain
LIMCCEJA_00171	0.0	lacE	2.7.1.207	-	G	ko:K02787,ko:K02788	ko00052,ko01100,ko02060,map00052,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphotransferase system, EIIC
LIMCCEJA_00172	8.11e-174	lacG	3.2.1.21, 3.2.1.85, 3.2.1.86	GT1	G	ko:K01220,ko:K01223,ko:K05350	ko00010,ko00052,ko00460,ko00500,ko00940,ko01100,ko01110,map00010,map00052,map00460,map00500,map00940,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
LIMCCEJA_00173	2.93e-174	lacG	3.2.1.21, 3.2.1.85, 3.2.1.86	GT1	G	ko:K01220,ko:K01223,ko:K05350	ko00010,ko00052,ko00460,ko00500,ko00940,ko01100,ko01110,map00010,map00052,map00460,map00500,map00940,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
LIMCCEJA_00174	8.62e-66	lacF	2.7.1.196, 2.7.1.205, 2.7.1.207	-	G	ko:K02759,ko:K02786	ko00052,ko00500,ko01100,ko02060,map00052,map00500,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIA subunit
LIMCCEJA_00175	1.71e-284	galK	2.7.1.6	-	F	ko:K00849	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
LIMCCEJA_00176	2.55e-248	galE	5.1.3.2	-	M	ko:K01784	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the NAD(P)-dependent epimerase dehydratase family
LIMCCEJA_00177	0.0	galT	2.7.7.12	-	G	ko:K00965	ko00052,ko00520,ko01100,ko04917,map00052,map00520,map01100,map04917	ko00000,ko00001,ko00002,ko01000	UDP-glucose--hexose-1-phosphate uridylyltransferase
LIMCCEJA_00178	5.88e-213	msmR	-	-	K	ko:K02529	-	ko00000,ko03000	Transcriptional regulator
LIMCCEJA_00179	2.37e-251	galM	5.1.3.3	-	G	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the interconversion of alpha and beta anomers of maltose
LIMCCEJA_00180	8.23e-290	gatC	-	-	G	ko:K20114	ko02060,map02060	ko00000,ko00001,ko00002,ko02000	PTS system sugar-specific permease component
LIMCCEJA_00182	2.82e-40	-	-	-	-	-	-	-	-
LIMCCEJA_00183	2.09e-243	-	-	-	V	-	-	-	Beta-lactamase
LIMCCEJA_00184	9.82e-164	-	-	-	S	-	-	-	Domain of unknown function (DUF4867)
LIMCCEJA_00185	2.12e-226	lacC	2.7.1.144	-	H	ko:K00917	ko00052,ko01100,map00052,map01100	ko00000,ko00001,ko01000	pfkB family carbohydrate kinase
LIMCCEJA_00186	8.82e-241	lacD	4.1.2.40	-	G	ko:K01635	ko00052,ko01100,ko02024,map00052,map01100,map02024	ko00000,ko00001,ko01000	Belongs to the aldolase LacD family
LIMCCEJA_00187	1.85e-121	lacB	5.3.1.26	-	G	ko:K01819	ko00052,ko01100,map00052,map01100	ko00000,ko00001,ko01000	Ribose/Galactose Isomerase
LIMCCEJA_00188	6.59e-96	lacA	5.3.1.26	-	G	ko:K01819	ko00052,ko01100,map00052,map01100	ko00000,ko00001,ko01000	Ribose/Galactose Isomerase
LIMCCEJA_00189	2.49e-182	-	-	-	K	ko:K02530	-	ko00000,ko03000	DeoR C terminal sensor domain
LIMCCEJA_00190	7.84e-152	-	-	-	S	-	-	-	HAD hydrolase, family IA, variant
LIMCCEJA_00191	8.58e-271	sbcD	-	-	L	ko:K03547	-	ko00000,ko03400	SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity
LIMCCEJA_00192	0.0	sbcC	-	-	L	ko:K03546	-	ko00000,ko03400	Putative exonuclease SbcCD, C subunit
LIMCCEJA_00193	2.78e-20	-	-	-	-	-	-	-	-
LIMCCEJA_00194	5.22e-112	hsp1	-	-	O	ko:K13993	ko04141,map04141	ko00000,ko00001,ko03110	Belongs to the small heat shock protein (HSP20) family
LIMCCEJA_00195	6.38e-271	mutY	-	-	L	ko:K03575	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	A G-specific adenine glycosylase
LIMCCEJA_00196	4.7e-194	-	-	-	I	-	-	-	alpha/beta hydrolase fold
LIMCCEJA_00197	3.65e-157	yrkL	-	-	S	-	-	-	Flavodoxin-like fold
LIMCCEJA_00199	1.34e-115	-	-	-	S	-	-	-	Short repeat of unknown function (DUF308)
LIMCCEJA_00200	3.31e-197	thiD	2.7.1.49, 2.7.4.7	-	H	ko:K00941	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Phosphomethylpyrimidine kinase
LIMCCEJA_00201	3.97e-254	-	-	-	-	-	-	-	-
LIMCCEJA_00203	1.34e-152	-	-	-	S	ko:K07118	-	ko00000	NmrA-like family
LIMCCEJA_00204	0.0	bglB	3.2.1.21, 3.2.1.52	GH3	G	ko:K01207,ko:K05349	ko00460,ko00500,ko00520,ko00531,ko00940,ko01100,ko01110,ko01501,map00460,map00500,map00520,map00531,map00940,map01100,map01110,map01501	ko00000,ko00001,ko00002,ko01000	hydrolase, family 3
LIMCCEJA_00206	7.85e-216	XK27_00670	-	-	S	ko:K01989,ko:K05832	-	ko00000,ko00002,ko02000	ABC transporter substrate binding protein
LIMCCEJA_00208	2.52e-216	XK27_00670	-	-	S	ko:K01989,ko:K05832	-	ko00000,ko00002,ko02000	ABC transporter
LIMCCEJA_00209	1.68e-208	WQ51_06230	-	-	U	ko:K05832	-	ko00000,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
LIMCCEJA_00210	4.1e-181	-	-	-	S	ko:K05833	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
LIMCCEJA_00211	3.51e-224	-	1.1.1.1	-	C	ko:K00001	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	Zinc-binding dehydrogenase
LIMCCEJA_00212	0.0	pacL3	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	Cation transporter/ATPase, N-terminus
LIMCCEJA_00213	8.07e-233	ykcC	-	GT2	M	ko:K20534	-	ko00000,ko01000,ko01005,ko02000	Glycosyl transferase family 2
LIMCCEJA_00214	0.0	ykcB	-	-	M	-	-	-	Dolichyl-phosphate-mannose-protein mannosyltransferase
LIMCCEJA_00215	2.64e-94	-	-	-	S	-	-	-	GtrA-like protein
LIMCCEJA_00216	2.19e-15	-	-	-	-	-	-	-	-
LIMCCEJA_00217	4.31e-165	ciaR	-	-	K	ko:K14983	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko02022	cheY-homologous receiver domain
LIMCCEJA_00218	3.94e-309	ciaH	2.7.13.3	-	T	ko:K14982	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	His Kinase A (phosphoacceptor) domain
LIMCCEJA_00219	8.06e-87	-	-	-	S	-	-	-	Belongs to the HesB IscA family
LIMCCEJA_00220	0.0	-	-	-	QT	-	-	-	PucR C-terminal helix-turn-helix domain
LIMCCEJA_00221	5.32e-207	-	-	-	S	-	-	-	KR domain
LIMCCEJA_00222	6.7e-203	adc	4.1.1.4	-	Q	ko:K01574	ko00072,ko00640,ko01100,map00072,map00640,map01100	ko00000,ko00001,ko00002,ko01000	Acetoacetate decarboxylase (ADC)
LIMCCEJA_00223	1.77e-158	ydgI	-	-	C	-	-	-	Nitroreductase family
LIMCCEJA_00224	3.88e-264	lldD	1.13.12.4	-	C	ko:K00467	ko00620,map00620	ko00000,ko00001,ko01000	IMP dehydrogenase / GMP reductase domain
LIMCCEJA_00227	3.31e-237	-	-	-	K	-	-	-	sequence-specific DNA binding
LIMCCEJA_00228	5.58e-76	-	-	-	K	ko:K10947	-	ko00000,ko03000	Transcriptional regulator PadR-like family
LIMCCEJA_00229	2.05e-66	ygbF	-	-	S	-	-	-	Sugar efflux transporter for intercellular exchange
LIMCCEJA_00230	1.46e-65	-	-	-	-	-	-	-	-
LIMCCEJA_00231	2.09e-243	-	1.1.1.1, 1.6.5.5	-	C	ko:K00001,ko:K00344	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily
LIMCCEJA_00232	5.83e-75	-	-	-	-	-	-	-	-
LIMCCEJA_00233	6.82e-104	-	-	-	-	-	-	-	-
LIMCCEJA_00234	5.52e-265	XK27_05220	-	-	S	-	-	-	AI-2E family transporter
LIMCCEJA_00235	1.99e-36	-	-	-	-	-	-	-	-
LIMCCEJA_00236	2.46e-130	lexA	3.4.21.88	-	K	ko:K01356	-	ko00000,ko00002,ko01000,ko01002,ko03400	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
LIMCCEJA_00237	5.63e-102	-	-	-	-	-	-	-	-
LIMCCEJA_00238	3.6e-215	mleP2	-	-	S	ko:K07088	-	ko00000	Transporter, auxin efflux carrier (AEC) family protein
LIMCCEJA_00239	2.82e-139	-	-	-	S	-	-	-	Flavin reductase like domain
LIMCCEJA_00240	1.77e-185	-	-	-	-	-	-	-	-
LIMCCEJA_00241	1e-136	fthC	6.3.3.2	-	H	ko:K01934	ko00670,ko01100,map00670,map01100	ko00000,ko00001,ko01000	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
LIMCCEJA_00242	5.06e-83	yeaO	-	-	S	-	-	-	Protein of unknown function, DUF488
LIMCCEJA_00243	1.05e-221	-	-	-	P	ko:K03284	-	ko00000,ko02000	CorA-like Mg2+ transporter protein
LIMCCEJA_00244	5.11e-208	mleR	-	-	K	-	-	-	LysR family
LIMCCEJA_00245	0.0	mleS	1.1.1.38, 4.1.1.101	-	C	ko:K00027,ko:K22212	ko00620,ko01120,ko01200,ko02020,map00620,map01120,map01200,map02020	ko00000,ko00001,ko01000	Malic enzyme
LIMCCEJA_00246	8.81e-218	mleP	-	-	S	ko:K07088	-	ko00000	Sodium Bile acid symporter family
LIMCCEJA_00247	5.79e-117	tpx	1.11.1.15	-	O	ko:K11065	-	ko00000,ko01000	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
LIMCCEJA_00248	7.23e-124	-	-	-	-	-	-	-	-
LIMCCEJA_00249	1.38e-228	-	-	-	K	-	-	-	sequence-specific DNA binding
LIMCCEJA_00250	0.0	-	-	-	V	-	-	-	ABC transporter transmembrane region
LIMCCEJA_00251	0.0	pepF	-	-	E	-	-	-	Oligopeptidase F
LIMCCEJA_00252	2.01e-102	ndk	2.7.4.6	-	F	ko:K00940	ko00230,ko00240,ko00983,ko01100,ko01110,ko01130,ko04016,map00230,map00240,map00983,map01100,map01110,map01130,map04016	ko00000,ko00001,ko00002,ko01000,ko04131	Belongs to the NDK family
LIMCCEJA_00253	2.32e-79	-	-	-	-	-	-	-	-
LIMCCEJA_00254	0.0	yfgQ	-	-	P	ko:K12952	-	ko00000,ko01000	E1-E2 ATPase
LIMCCEJA_00255	2.31e-232	-	3.4.11.5	-	I	ko:K01259	ko00330,map00330	ko00000,ko00001,ko01000,ko01002	Releases the N-terminal proline from various substrates
LIMCCEJA_00256	1.03e-77	-	-	-	-	-	-	-	-
LIMCCEJA_00257	1.09e-120	-	-	-	J	-	-	-	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LIMCCEJA_00258	2.39e-257	napA	-	-	P	-	-	-	Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
LIMCCEJA_00259	6.4e-156	XK27_05175	3.1.3.18	-	S	ko:K01091	ko00630,ko01100,ko01110,ko01130,map00630,map01100,map01110,map01130	ko00000,ko00001,ko01000	haloacid dehalogenase-like hydrolase
LIMCCEJA_00260	6.42e-101	-	-	-	K	-	-	-	Transcriptional regulator
LIMCCEJA_00261	6.89e-231	ybcH	-	-	D	ko:K06889	-	ko00000	Alpha beta
LIMCCEJA_00262	2.14e-110	nrdI	-	-	F	ko:K03647	-	ko00000	Belongs to the NrdI family
LIMCCEJA_00263	3.19e-202	dkgB	-	-	S	-	-	-	reductase
LIMCCEJA_00264	1.84e-161	-	-	-	-	-	-	-	-
LIMCCEJA_00265	2.64e-209	-	-	-	S	-	-	-	Alpha beta hydrolase
LIMCCEJA_00266	1.57e-150	yviA	-	-	S	-	-	-	Protein of unknown function (DUF421)
LIMCCEJA_00267	5.25e-96	-	-	-	S	-	-	-	Protein of unknown function (DUF3290)
LIMCCEJA_00268	5.92e-284	metE	2.1.1.14	-	E	ko:K00549	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	methionine synthase, vitamin-B12 independent
LIMCCEJA_00269	1.19e-112	luxS	4.4.1.21	-	H	ko:K07173	ko00270,ko01100,ko01230,ko02024,ko02026,ko05111,map00270,map01100,map01230,map02024,map02026,map05111	ko00000,ko00001,ko00002,ko01000	Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
LIMCCEJA_00270	8.81e-135	yjbF	-	-	S	-	-	-	SNARE associated Golgi protein
LIMCCEJA_00271	2.42e-132	ruvA	3.6.4.12	-	L	ko:K03550	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
LIMCCEJA_00272	4.98e-250	ruvB	3.6.4.12	-	L	ko:K03551	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
LIMCCEJA_00273	2.16e-264	queA	2.4.99.17	-	J	ko:K07568	-	ko00000,ko01000,ko03016	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
LIMCCEJA_00274	1.71e-289	tgt	2.4.2.29	-	F	ko:K00773	-	ko00000,ko01000,ko03016	Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
LIMCCEJA_00275	4.29e-87	yajC	-	-	U	ko:K03210	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Preprotein translocase
LIMCCEJA_00276	0.0	adhE	1.1.1.1, 1.2.1.10	-	C	ko:K04072	ko00010,ko00071,ko00350,ko00620,ko00625,ko00626,ko00650,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00620,map00625,map00626,map00650,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	belongs to the iron- containing alcohol dehydrogenase family
LIMCCEJA_00277	1.45e-150	mntR	-	-	K	ko:K03709	-	ko00000,ko03000	Helix-turn-helix diphteria tox regulatory element
LIMCCEJA_00278	0.0	zwf	1.1.1.363, 1.1.1.49	-	G	ko:K00036	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,ko05230,map00030,map00480,map01100,map01110,map01120,map01130,map01200,map05230	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
LIMCCEJA_00279	7.56e-266	dinB	2.7.7.7	-	L	ko:K02346	-	ko00000,ko01000,ko03400	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
LIMCCEJA_00280	1.54e-305	ytoI	-	-	K	-	-	-	DRTGG domain
LIMCCEJA_00281	6.11e-229	nrnA	3.1.13.3, 3.1.3.7	-	S	ko:K06881	ko00920,ko01100,ko01120,map00920,map01100,map01120	ko00000,ko00001,ko01000,ko03400	DHHA1 domain protein
LIMCCEJA_00282	0.0	cshB	3.6.4.13	-	JKL	ko:K05592,ko:K18692	ko03018,map03018	ko00000,ko00001,ko01000,ko03009,ko03019	DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
LIMCCEJA_00283	2.11e-221	-	-	-	-	-	-	-	-
LIMCCEJA_00284	0.0	alaS	6.1.1.7	-	J	ko:K01872	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
LIMCCEJA_00285	9.98e-267	-	-	-	-	-	-	-	-
LIMCCEJA_00286	4.89e-58	yrzL	-	-	S	-	-	-	Belongs to the UPF0297 family
LIMCCEJA_00287	1.32e-96	yrrK	-	-	J	ko:K07447	-	ko00000,ko01000	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
LIMCCEJA_00288	1.85e-69	yrzB	-	-	S	-	-	-	Belongs to the UPF0473 family
LIMCCEJA_00289	3.45e-49	-	-	-	D	ko:K09888	-	ko00000,ko03036	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
LIMCCEJA_00290	7.74e-121	cvpA	-	-	S	-	-	-	Colicin V production protein
LIMCCEJA_00291	0.0	mutS2	-	-	L	ko:K07456	ko03430,map03430	ko00000,ko00001,ko03400	Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
LIMCCEJA_00292	3.64e-70	trxA	-	-	O	ko:K03671	ko04621,ko05418,map04621,map05418	ko00000,ko00001,ko03110	Belongs to the thioredoxin family
LIMCCEJA_00293	0.0	dltA	6.1.1.13	-	H	ko:K03367	ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01000,ko01504	Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
LIMCCEJA_00294	1.46e-305	dltB	-	-	M	ko:K03739	ko01503,ko02020,ko05150,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01504	MBOAT, membrane-bound O-acyltransferase family
LIMCCEJA_00295	1.2e-49	dltC	6.1.1.13	-	J	ko:K14188	ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01000,ko01504	Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
LIMCCEJA_00296	1.28e-315	dltD	-	-	M	ko:K03740	ko01503,ko02020,ko05150,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01504	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
LIMCCEJA_00297	1.18e-109	yslB	-	-	S	-	-	-	Protein of unknown function (DUF2507)
LIMCCEJA_00298	0.0	murI	3.6.1.66, 5.1.1.3	-	M	ko:K01776,ko:K02428	ko00230,ko00471,ko01100,map00230,map00471,map01100	ko00000,ko00001,ko01000,ko01011	Provides the (R)-glutamate required for cell wall biosynthesis
LIMCCEJA_00299	9.48e-125	ysnB	-	-	S	ko:K07095	-	ko00000	Phosphoesterase
LIMCCEJA_00300	2.59e-172	gla	-	-	U	ko:K02440	-	ko00000,ko02000	Major intrinsic protein
LIMCCEJA_00301	4.62e-112	ykuL	-	-	S	-	-	-	CBS domain
LIMCCEJA_00302	1.76e-203	-	-	-	S	ko:K08974	-	ko00000	Domain of unknown function (DUF368)
LIMCCEJA_00303	5.26e-202	ykuT	-	-	M	ko:K16052,ko:K22044	-	ko00000,ko02000	mechanosensitive ion channel
LIMCCEJA_00305	7.19e-40	ytxG	-	-	S	-	-	-	protein containing a divergent version of the methyl-accepting chemotaxis-like domain
LIMCCEJA_00306	4.56e-110	ytxH	-	-	S	-	-	-	YtxH-like protein
LIMCCEJA_00307	4.48e-120	yrxA	-	-	S	ko:K07105	-	ko00000	3H domain
LIMCCEJA_00308	5.39e-275	pepQ	3.4.13.9	-	E	ko:K01271	-	ko00000,ko01000,ko01002	Creatinase/Prolidase N-terminal domain
LIMCCEJA_00309	6.12e-232	ccpA	-	-	K	ko:K02529	-	ko00000,ko03000	catabolite control protein A
LIMCCEJA_00310	0.0	pbp1B	2.4.1.129	GT51	M	ko:K03693,ko:K12551	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01003,ko01011	Penicillin binding protein transpeptidase domain
LIMCCEJA_00311	1.51e-163	yfnB	3.8.1.2	-	S	ko:K01560,ko:K07025	ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120	ko00000,ko00001,ko01000	HAD-hyrolase-like
LIMCCEJA_00312	2.05e-174	birA	6.3.4.15	-	H	ko:K03524	ko00780,ko01100,map00780,map01100	ko00000,ko00001,ko01000,ko03000	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
LIMCCEJA_00313	0.0	pepV	3.5.1.18	-	E	ko:K01270,ko:K01274,ko:K01439	ko00300,ko00480,ko01100,ko01120,ko01230,map00300,map00480,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000,ko01002	dipeptidase PepV
LIMCCEJA_00314	0.0	glpQ	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	Glycerophosphoryl diester phosphodiesterase family
LIMCCEJA_00315	3.48e-73	-	-	-	-	-	-	-	-
LIMCCEJA_00316	6.93e-240	yibE	-	-	S	-	-	-	overlaps another CDS with the same product name
LIMCCEJA_00317	2.41e-153	yibF	-	-	S	-	-	-	overlaps another CDS with the same product name
LIMCCEJA_00318	1.94e-148	-	-	-	S	-	-	-	Calcineurin-like phosphoesterase
LIMCCEJA_00319	0.0	yunD	3.1.3.5	-	F	ko:K01081	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the 5'-nucleotidase family
LIMCCEJA_00320	5.33e-147	yutD	-	-	S	-	-	-	Protein of unknown function (DUF1027)
LIMCCEJA_00321	4.68e-187	nagD	3.1.3.41	-	G	ko:K01101	ko00627,ko01120,map00627,map01120	ko00000,ko00001,ko01000	Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
LIMCCEJA_00322	6.18e-150	-	-	-	S	-	-	-	Protein of unknown function (DUF1461)
LIMCCEJA_00323	4.31e-149	dedA	-	-	S	ko:K03975	-	ko00000	SNARE-like domain protein
LIMCCEJA_00324	6.48e-115	pgpA	3.1.3.27	-	I	ko:K01095	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Phosphatidylglycerophosphatase A
LIMCCEJA_00325	6.69e-238	yumC	1.18.1.2, 1.19.1.1	-	C	ko:K21567	-	ko00000,ko01000	Ferredoxin--NADP reductase
LIMCCEJA_00326	3.11e-142	ppiB	5.2.1.8	-	G	ko:K03768	-	ko00000,ko01000,ko03110	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
LIMCCEJA_00327	2.02e-83	yugI	-	-	J	ko:K07570	-	ko00000	general stress protein
LIMCCEJA_00328	1.45e-46	-	-	-	-	-	-	-	-
LIMCCEJA_00329	1.13e-93	-	-	-	S	-	-	-	COG NOG38524 non supervised orthologous group
LIMCCEJA_00354	2.21e-121	sigH	-	-	K	ko:K03088,ko:K03091,ko:K12296	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko03000,ko03021	Sigma-70 region 2
LIMCCEJA_00355	0.0	ybeC	-	-	E	-	-	-	amino acid
LIMCCEJA_00356	1.55e-294	pimB	2.4.1.337	GT4	M	ko:K19002	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000,ko01003	Glycosyltransferase, group 1 family protein
LIMCCEJA_00357	7.66e-251	cpoA	2.4.1.208	GT4	M	ko:K13677,ko:K13678	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000,ko01003	Glycosyltransferase, group 1 family protein
LIMCCEJA_00358	1.12e-224	mprF	-	-	I	ko:K07027	-	ko00000,ko02000	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
LIMCCEJA_00359	9.1e-281	araT	-	-	E	ko:K00841	ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase
LIMCCEJA_00360	1.4e-58	ykuJ	-	-	S	-	-	-	Protein of unknown function (DUF1797)
LIMCCEJA_00361	0.0	ltaS	2.7.8.20	-	M	ko:K19005	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
LIMCCEJA_00362	1.8e-104	perR	-	-	P	ko:K03711,ko:K09825	-	ko00000,ko03000	Belongs to the Fur family
LIMCCEJA_00365	1.48e-140	-	-	-	-	-	-	-	-
LIMCCEJA_00366	1.66e-269	metK	2.5.1.6	-	H	ko:K00789	ko00270,ko01100,ko01110,ko01230,map00270,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
LIMCCEJA_00367	0.0	mdr	-	-	EGP	-	-	-	Major Facilitator
LIMCCEJA_00368	3.41e-107	-	-	-	K	-	-	-	MerR HTH family regulatory protein
LIMCCEJA_00369	0.0	ycnB	-	-	U	-	-	-	Belongs to the major facilitator superfamily
LIMCCEJA_00370	1.3e-155	-	-	-	S	-	-	-	Domain of unknown function (DUF4811)
LIMCCEJA_00371	3.69e-159	yodM	3.6.1.27	-	I	ko:K19302	ko00550,map00550	ko00000,ko00001,ko01000,ko01011	Acid phosphatase homologues
LIMCCEJA_00372	0.0	leuS	6.1.1.4	-	J	ko:K01869	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Belongs to the class-I aminoacyl-tRNA synthetase family
LIMCCEJA_00373	0.0	ytgP	-	-	S	ko:K03328	-	ko00000	Polysaccharide biosynthesis protein
LIMCCEJA_00374	1.97e-168	rsuA	5.4.99.19	-	J	ko:K06183	-	ko00000,ko01000,ko03009	Belongs to the pseudouridine synthase RsuA family
LIMCCEJA_00375	8.09e-48	yhcC	-	-	S	ko:K07069	-	ko00000	Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082)
LIMCCEJA_00376	9.98e-182	nnrD	4.2.1.136, 5.1.99.6	-	H	ko:K17758,ko:K17759	-	ko00000,ko01000	Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
LIMCCEJA_00377	1.18e-122	-	-	-	F	-	-	-	NUDIX domain
LIMCCEJA_00379	3.41e-112	gpo	1.11.1.9	-	O	ko:K00432	ko00480,ko00590,ko04918,map00480,map00590,map04918	ko00000,ko00001,ko01000	Belongs to the glutathione peroxidase family
LIMCCEJA_00380	1.56e-289	patB	4.4.1.8	-	E	ko:K14155	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko01000,ko01007	Aminotransferase, class I
LIMCCEJA_00381	7.52e-239	cpdA	-	-	S	-	-	-	Calcineurin-like phosphoesterase
LIMCCEJA_00382	1.66e-84	-	-	-	S	-	-	-	acid phosphatase activity
LIMCCEJA_00383	2.93e-51	XK27_08630	-	-	T	ko:K07166	-	ko00000	Belongs to the UPF0237 family
LIMCCEJA_00384	4.86e-314	XK27_08635	-	-	S	ko:K09157	-	ko00000	UPF0210 protein
LIMCCEJA_00385	3.78e-276	coiA	-	-	S	ko:K06198	-	ko00000	Competence protein
LIMCCEJA_00386	8.12e-151	yjbH	-	-	Q	-	-	-	Thioredoxin
LIMCCEJA_00387	3.46e-136	-	-	-	S	-	-	-	CYTH
LIMCCEJA_00388	2.92e-160	yjbM	2.7.6.5	-	S	ko:K07816	ko00230,map00230	ko00000,ko00001,ko01000	RelA SpoT domain protein
LIMCCEJA_00389	3.86e-194	nadK	2.7.1.23	-	F	ko:K00858	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
LIMCCEJA_00390	4.44e-222	yjbO	5.4.99.23	-	G	ko:K06180	-	ko00000,ko01000,ko03009	Responsible for synthesis of pseudouridine from uracil
LIMCCEJA_00391	9.8e-259	apbE	2.7.1.180	-	H	ko:K03734	-	ko00000,ko01000	Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
LIMCCEJA_00392	5.27e-147	cutC	-	-	P	ko:K06201	-	ko00000	Participates in the control of copper homeostasis
LIMCCEJA_00393	4.82e-187	uppP	3.6.1.27	-	V	ko:K06153	ko00550,map00550	ko00000,ko00001,ko01000,ko01011	Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
LIMCCEJA_00394	2.3e-254	pgl	3.1.1.31	-	G	ko:K07404	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Lactonase, 7-bladed beta-propeller
LIMCCEJA_00395	9.18e-83	srlB	2.7.1.198	-	G	ko:K02781	ko00051,ko02060,map00051,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system glucitol/sorbitol-specific IIA component
LIMCCEJA_00396	4.12e-56	rpsN	-	-	J	ko:K02954	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
LIMCCEJA_00397	1.72e-245	guaC	1.7.1.7	-	F	ko:K00364	ko00230,map00230	ko00000,ko00001,ko01000	Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
LIMCCEJA_00398	9.63e-220	corA	-	-	P	ko:K03284	-	ko00000,ko02000	CorA-like Mg2+ transporter protein
LIMCCEJA_00399	4.88e-200	rrmA	2.1.1.187	-	H	ko:K00563,ko:K10947	-	ko00000,ko01000,ko03000,ko03009	Methyltransferase
LIMCCEJA_00400	6.48e-125	cspR	2.1.1.207	-	J	ko:K03216	-	ko00000,ko01000,ko03016	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
LIMCCEJA_00401	8.84e-93	-	-	-	S	-	-	-	Protein of unknown function (DUF1149)
LIMCCEJA_00402	0.0	ftsK	-	-	D	ko:K03466	-	ko00000,ko03036	Belongs to the FtsK SpoIIIE SftA family
LIMCCEJA_00403	4.47e-294	ymfF	-	-	S	-	-	-	Peptidase M16 inactive domain protein
LIMCCEJA_00404	7.12e-312	ymfH	-	-	S	-	-	-	Peptidase M16
LIMCCEJA_00405	3.01e-166	fabG	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Enoyl-(Acyl carrier protein) reductase
LIMCCEJA_00406	1.8e-167	ymfM	-	-	S	ko:K15539	-	ko00000	Helix-turn-helix domain
LIMCCEJA_00407	7.57e-135	pgsA	2.7.8.5	-	I	ko:K00995	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
LIMCCEJA_00408	1.18e-290	cinA	3.5.1.42	-	S	ko:K03742,ko:K03743	ko00760,map00760	ko00000,ko00001,ko01000	Belongs to the CinA family
LIMCCEJA_00409	1.41e-241	recA	-	-	L	ko:K03553	ko03440,map03440	ko00000,ko00001,ko00002,ko03400	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
LIMCCEJA_00410	3.92e-36	-	-	-	-	-	-	-	-
LIMCCEJA_00411	0.0	rny	-	-	S	ko:K18682	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	Endoribonuclease that initiates mRNA decay
LIMCCEJA_00412	8.08e-154	yvyE	3.4.13.9	-	S	ko:K01271	-	ko00000,ko01000,ko01002	YigZ family
LIMCCEJA_00413	4.51e-299	comFA	-	-	L	ko:K02240	-	ko00000,ko00002,ko02044	Helicase C-terminal domain protein
LIMCCEJA_00414	1.8e-117	comFC	-	-	S	ko:K02242	-	ko00000,ko00002,ko02044	Competence protein
LIMCCEJA_00415	7.96e-127	hpf	-	-	J	ko:K05808	-	ko00000,ko03009	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
LIMCCEJA_00417	0.0	secA	-	-	U	ko:K03070	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
LIMCCEJA_00418	1.11e-238	prfB	-	-	J	ko:K02836	-	ko00000,ko03012	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
LIMCCEJA_00419	2.59e-160	ftsE	-	-	D	ko:K09812	ko02010,map02010	ko00000,ko00001,ko00002,ko02000,ko03036	ABC transporter
LIMCCEJA_00420	4.17e-204	ftsX	-	-	D	ko:K09811	ko02010,map02010	ko00000,ko00001,ko00002,ko02000,ko03036	Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation
LIMCCEJA_00421	2.13e-255	minJ	-	-	O	-	-	-	Domain present in PSD-95, Dlg, and ZO-1/2.
LIMCCEJA_00422	9.79e-168	phoP	-	-	K	ko:K07658	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	response regulator
LIMCCEJA_00423	0.0	phoR	2.7.13.3	-	T	ko:K07636	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
LIMCCEJA_00424	4.5e-200	pstS	-	-	P	ko:K02040	ko02010,ko02020,ko05152,map02010,map02020,map05152	ko00000,ko00001,ko00002,ko02000	Phosphate
LIMCCEJA_00425	1.56e-205	pstC	-	-	P	ko:K02037	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	probably responsible for the translocation of the substrate across the membrane
LIMCCEJA_00426	3.55e-200	pstA	-	-	P	ko:K02038	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Phosphate transport system permease protein PstA
LIMCCEJA_00427	6.38e-192	pstB2	3.6.3.27	-	P	ko:K02036	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
LIMCCEJA_00428	1.75e-180	pstB1	3.6.3.27	-	P	ko:K02036	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
LIMCCEJA_00429	1.33e-156	phoU	-	-	P	ko:K02039	-	ko00000	Plays a role in the regulation of phosphate uptake
LIMCCEJA_00430	2.79e-177	-	-	-	L	ko:K07497	-	ko00000	hmm pf00665
LIMCCEJA_00431	5.65e-171	-	-	-	L	-	-	-	Helix-turn-helix domain
LIMCCEJA_00432	0.0	yvlB	-	-	S	-	-	-	Putative adhesin
LIMCCEJA_00433	7.01e-49	-	-	-	-	-	-	-	-
LIMCCEJA_00434	2.28e-61	yvlD	-	-	S	ko:K08972	-	ko00000	Mycobacterial 4 TMS phage holin, superfamily IV
LIMCCEJA_00435	5.82e-223	hprK	-	-	F	ko:K06023	-	ko00000,ko01000	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
LIMCCEJA_00436	1.2e-202	lgt	-	-	M	ko:K13292	-	ko00000,ko01000	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
LIMCCEJA_00437	5.39e-251	gpsA	1.1.1.94	-	I	ko:K00057	ko00564,ko01110,map00564,map01110	ko00000,ko00001,ko01000	Glycerol-3-phosphate dehydrogenase
LIMCCEJA_00438	8.36e-230	trxB	1.8.1.9	-	C	ko:K00384	ko00450,map00450	ko00000,ko00001,ko01000	Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
LIMCCEJA_00439	0.0	pgm	5.4.2.2	-	G	ko:K01835	ko00010,ko00030,ko00052,ko00230,ko00500,ko00520,ko00521,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00052,map00230,map00500,map00520,map00521,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
LIMCCEJA_00440	2.82e-153	yfbR	-	-	S	ko:K07023	-	ko00000	HD containing hydrolase-like enzyme
LIMCCEJA_00441	0.0	uvrB	-	-	L	ko:K03702	ko03420,map03420	ko00000,ko00001,ko03400	damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
LIMCCEJA_00442	0.0	uvrA	-	-	L	ko:K03701	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
LIMCCEJA_00443	1.04e-110	-	-	-	S	-	-	-	Short repeat of unknown function (DUF308)
LIMCCEJA_00444	1.47e-213	yvcJ	-	-	S	ko:K06958	-	ko00000,ko03019	Displays ATPase and GTPase activities
LIMCCEJA_00445	3.49e-247	yvcK	-	-	S	-	-	-	Required for morphogenesis under gluconeogenic growth conditions
LIMCCEJA_00446	1.66e-220	whiA	-	-	K	ko:K09762	-	ko00000	May be required for sporulation
LIMCCEJA_00447	6.45e-105	ohrR	-	-	K	ko:K18906	-	ko00000,ko00002,ko01504,ko03000	helix_turn_helix multiple antibiotic resistance protein
LIMCCEJA_00448	1.71e-131	clpP	3.4.21.92	-	O	ko:K01358	ko04112,ko04212,map04112,map04212	ko00000,ko00001,ko01000,ko01002	Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
LIMCCEJA_00450	2.73e-241	cggR	-	-	K	ko:K05311	-	ko00000,ko03000	Putative sugar-binding domain
LIMCCEJA_00451	2.99e-247	gap	1.2.1.12	-	G	ko:K00134	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
LIMCCEJA_00452	1.52e-282	pgk	2.7.2.3	-	F	ko:K00927	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the phosphoglycerate kinase family
LIMCCEJA_00453	8.05e-180	tpiA	5.3.1.1	-	G	ko:K01803	ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
LIMCCEJA_00454	5.04e-314	eno	4.2.1.11	-	G	ko:K01689	ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066	ko00000,ko00001,ko00002,ko01000,ko03019,ko04147	Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
LIMCCEJA_00455	5.53e-84	-	-	-	-	-	-	-	-
LIMCCEJA_00456	0.0	eriC	-	-	P	ko:K03281	-	ko00000	chloride
LIMCCEJA_00457	1.48e-78	-	-	-	-	-	-	-	-
LIMCCEJA_00458	2.92e-42	secG	-	-	U	ko:K03075	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Preprotein translocase
LIMCCEJA_00459	2.23e-178	est	3.1.1.1	-	S	ko:K03928	-	ko00000,ko01000	Serine aminopeptidase, S33
LIMCCEJA_00460	0.0	rnr	-	-	J	ko:K12573	ko03018,map03018	ko00000,ko00001,ko01000,ko03016,ko03019	3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
LIMCCEJA_00461	1.28e-107	smpB	-	-	J	ko:K03664	-	ko00000	the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
LIMCCEJA_00462	0.0	nplT	3.2.1.133, 3.2.1.135, 3.2.1.54	GH13	G	ko:K01208	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 13 family
LIMCCEJA_00463	0.0	mapA	2.4.1.8	GH65	G	ko:K00691	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	hydrolase, family 65, central catalytic
LIMCCEJA_00464	1.05e-152	-	5.4.2.6	-	S	ko:K01838	ko00500,map00500	ko00000,ko00001,ko01000	Haloacid dehalogenase-like hydrolase
LIMCCEJA_00465	7.78e-66	-	-	-	-	-	-	-	-
LIMCCEJA_00466	9.23e-309	YSH1	-	-	S	ko:K12574	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	Metallo-beta-lactamase superfamily
LIMCCEJA_00467	9.05e-314	-	-	-	G	ko:K02027	-	ko00000,ko00002,ko02000	Bacterial extracellular solute-binding protein
LIMCCEJA_00468	1.1e-188	malF	-	-	G	ko:K02026	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
LIMCCEJA_00469	1.21e-213	-	-	-	P	ko:K02025	-	ko00000,ko00002,ko02000	ABC-type sugar transport systems, permease components
LIMCCEJA_00470	2.11e-249	malK	-	-	P	ko:K10112,ko:K17240	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ATPases associated with a variety of cellular activities
LIMCCEJA_00471	7.94e-134	-	-	-	K	ko:K06977	-	ko00000	Acetyltransferase (GNAT) domain
LIMCCEJA_00472	5.33e-119	-	-	-	-	-	-	-	-
LIMCCEJA_00473	5.93e-205	ycsE	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
LIMCCEJA_00474	4.68e-168	ung	3.2.2.27	-	L	ko:K03648	ko03410,ko05340,map03410,map05340	ko00000,ko00001,ko01000,ko03400	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
LIMCCEJA_00475	4.47e-230	pta	2.3.1.8, 3.6.3.21	-	C	ko:K00625,ko:K02028	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000,ko02000	phosphate acetyltransferase
LIMCCEJA_00476	5.07e-108	ydiB	-	-	O	ko:K06925	-	ko00000,ko03016	Hydrolase, P-loop family
LIMCCEJA_00477	6.5e-214	-	-	-	S	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
LIMCCEJA_00478	5.04e-279	ysdA	-	-	CP	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 family transporter protein
LIMCCEJA_00479	3.99e-129	dnaQ	2.7.7.7	-	L	ko:K02342	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III
LIMCCEJA_00480	2.84e-192	exoA	3.1.11.2	-	L	ko:K01142	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	exodeoxyribonuclease III
LIMCCEJA_00481	4.74e-212	murB	1.3.1.98	-	M	ko:K00075	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation
LIMCCEJA_00482	0.0	yvgP	-	-	P	ko:K03316	-	ko00000	Sodium proton antiporter
LIMCCEJA_00483	4.84e-125	-	-	-	K	-	-	-	Cupin domain
LIMCCEJA_00484	9.49e-262	potA	3.6.3.30, 3.6.3.31	-	P	ko:K02010,ko:K11072	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
LIMCCEJA_00485	2.13e-191	potB	-	-	P	ko:K11071	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
LIMCCEJA_00486	7.08e-187	potC	-	-	P	ko:K11070	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
LIMCCEJA_00487	2.08e-267	potD	-	-	P	ko:K11069	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
LIMCCEJA_00488	1.2e-119	-	-	-	S	-	-	-	Domain of unknown function (DUF5067)
LIMCCEJA_00489	2.37e-79	-	-	-	-	-	-	-	-
LIMCCEJA_00491	0.0	pacL	-	-	P	-	-	-	Cation transporter/ATPase, N-terminus
LIMCCEJA_00492	1.96e-154	-	-	-	K	-	-	-	Transcriptional regulator
LIMCCEJA_00493	3.35e-250	-	-	-	V	ko:K01992	-	ko00000,ko00002,ko02000	ABC transporter
LIMCCEJA_00494	1.81e-168	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	AAA domain, putative AbiEii toxin, Type IV TA system
LIMCCEJA_00495	2.69e-195	dacA	2.7.7.85	-	S	ko:K18672	-	ko00000,ko01000	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
LIMCCEJA_00496	1.04e-237	ybbR	-	-	S	-	-	-	YbbR-like protein
LIMCCEJA_00497	0.0	glmM	5.4.2.10	-	G	ko:K03431	ko00520,ko01100,ko01130,map00520,map01100,map01130	ko00000,ko00001,ko01000	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
LIMCCEJA_00498	0.0	glmS	2.6.1.16	-	M	ko:K00820	ko00250,ko00520,ko01100,ko01130,ko04931,map00250,map00520,map01100,map01130,map04931	ko00000,ko00001,ko01000,ko01002	Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
LIMCCEJA_00499	0.0	pepF2	-	-	E	-	-	-	Oligopeptidase F
LIMCCEJA_00500	1.8e-119	-	-	-	S	-	-	-	VanZ like family
LIMCCEJA_00501	1.75e-170	yebC	-	-	K	-	-	-	Transcriptional regulatory protein
LIMCCEJA_00502	1.71e-184	comGA	-	-	NU	ko:K02243	-	ko00000,ko00002,ko02044	Type II IV secretion system protein
LIMCCEJA_00503	1.26e-216	comGB	-	-	NU	ko:K02244	-	ko00000,ko00002,ko02044	type II secretion system
LIMCCEJA_00504	4.92e-65	-	-	-	-	ko:K02245	-	ko00000,ko00002,ko02044	-
LIMCCEJA_00506	7.97e-71	-	-	-	-	-	-	-	-
LIMCCEJA_00507	2.14e-105	-	-	-	-	ko:K02248	-	ko00000,ko00002,ko02044	-
LIMCCEJA_00508	1.84e-65	-	-	-	-	-	-	-	-
LIMCCEJA_00509	4.7e-238	ytxK	2.1.1.72	-	L	ko:K00571	-	ko00000,ko01000,ko02048	N-6 DNA Methylase
LIMCCEJA_00510	1.35e-97	-	-	-	-	-	-	-	-
LIMCCEJA_00511	1.83e-316	cycA	-	-	E	ko:K03293,ko:K11737	-	ko00000,ko02000	Amino acid permease
LIMCCEJA_00512	1.07e-190	arbV	-	-	I	-	-	-	Phosphate acyltransferases
LIMCCEJA_00513	2.87e-212	arbx	-	-	M	-	-	-	Glycosyl transferase family 8
LIMCCEJA_00514	1.98e-234	arbY	-	-	M	-	-	-	family 8
LIMCCEJA_00515	6.04e-217	arbZ	-	-	I	-	-	-	Phosphate acyltransferases
LIMCCEJA_00516	0.0	rafA	3.2.1.22	-	G	ko:K07407	ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603	ko00000,ko00001,ko01000	alpha-galactosidase
LIMCCEJA_00518	3.79e-92	-	-	-	S	-	-	-	SdpI/YhfL protein family
LIMCCEJA_00519	2.22e-173	yclJ	-	-	K	ko:K02483	-	ko00000,ko02022	response regulator
LIMCCEJA_00520	0.0	yclK	-	-	T	-	-	-	Histidine kinase
LIMCCEJA_00521	1.15e-122	-	-	-	S	-	-	-	acetyltransferase
LIMCCEJA_00522	2.21e-42	-	-	-	-	-	-	-	-
LIMCCEJA_00523	1.49e-93	pheB	5.4.99.5	-	S	ko:K06209	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the UPF0735 family
LIMCCEJA_00524	2.24e-106	-	-	-	-	-	-	-	-
LIMCCEJA_00525	1.41e-77	-	-	-	-	-	-	-	-
LIMCCEJA_00526	0.0	polYB	2.7.7.7	-	L	ko:K02346,ko:K03502	-	ko00000,ko01000,ko03400	Belongs to the DNA polymerase type-Y family
LIMCCEJA_00528	1.14e-260	tcaA	-	-	S	ko:K21463	-	ko00000	response to antibiotic
LIMCCEJA_00529	3.23e-175	-	3.1.1.5	-	E	ko:K10804	ko01040,map01040	ko00000,ko00001,ko01000,ko01004	GDSL-like Lipase/Acylhydrolase
LIMCCEJA_00530	1.92e-53	-	-	-	S	-	-	-	Bacterial protein of unknown function (DUF898)
LIMCCEJA_00531	0.0	pcrA	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	ATP-dependent DNA helicase
LIMCCEJA_00532	0.0	ligA	6.5.1.2	-	L	ko:K01972	ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430	ko00000,ko00001,ko01000,ko03032,ko03400	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
LIMCCEJA_00533	2.76e-259	camS	-	-	S	-	-	-	sex pheromone
LIMCCEJA_00534	1.26e-61	gatC	6.3.5.6, 6.3.5.7	-	J	ko:K02435	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
LIMCCEJA_00535	0.0	gatA	6.3.5.6, 6.3.5.7	-	J	ko:K02433	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
LIMCCEJA_00536	0.0	gatB	6.3.5.6, 6.3.5.7	-	J	ko:K02434	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
LIMCCEJA_00537	1.22e-248	dagK	2.7.1.107	-	G	ko:K07029	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko01000	Lipid kinase
LIMCCEJA_00538	0.0	rumA_2	2.1.1.190	-	J	ko:K03215	-	ko00000,ko01000,ko03009	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
LIMCCEJA_00539	2.92e-279	mod	2.1.1.72	-	L	ko:K00571,ko:K07316	-	ko00000,ko01000,ko02048	DNA methylase
LIMCCEJA_00540	0.0	res	3.1.21.5	-	L	ko:K01156	-	ko00000,ko01000,ko02048	Type III restriction enzyme, res subunit
LIMCCEJA_00541	7.81e-282	yttB	-	-	EGP	-	-	-	Major Facilitator
LIMCCEJA_00542	1.69e-191	-	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
LIMCCEJA_00543	7.92e-216	-	-	-	S	-	-	-	Polyphosphate nucleotide phosphotransferase, PPK2 family
LIMCCEJA_00544	0.0	pepO	-	-	O	ko:K07386	-	ko00000,ko01000,ko01002	Peptidase family M13
LIMCCEJA_00545	3.32e-107	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
LIMCCEJA_00546	5.78e-213	yitS	-	-	S	-	-	-	Uncharacterised protein, DegV family COG1307
LIMCCEJA_00547	4.79e-167	hflC	-	-	O	ko:K04087	-	ko00000,ko00002,ko01000	prohibitin homologues
LIMCCEJA_00548	1.82e-41	-	-	-	-	-	-	-	-
LIMCCEJA_00549	3.07e-176	-	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
LIMCCEJA_00550	3.83e-79	-	-	-	S	-	-	-	Protein of unknown function (DUF1093)
LIMCCEJA_00551	3.98e-81	-	-	-	S	-	-	-	Domain of unknown function (DUF4828)
LIMCCEJA_00552	2.8e-229	mocA	-	-	S	-	-	-	Oxidoreductase
LIMCCEJA_00553	4.77e-306	yfmL	-	-	L	-	-	-	DEAD DEAH box helicase
LIMCCEJA_00554	2.05e-63	-	2.7.1.196, 2.7.1.205	-	G	ko:K02759	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIA subunit
LIMCCEJA_00555	5.45e-94	-	-	-	S	-	-	-	Domain of unknown function (DUF3284)
LIMCCEJA_00557	3.06e-07	-	-	-	-	-	-	-	-
LIMCCEJA_00558	0.0	recQ	3.6.4.12	-	L	ko:K03654	ko03018,map03018	ko00000,ko00001,ko01000,ko03400	ATP-dependent DNA helicase RecQ
LIMCCEJA_00559	6.99e-307	pepS	-	-	E	ko:K19689	-	ko00000,ko01000,ko01002	Thermophilic metalloprotease (M29)
LIMCCEJA_00560	3.46e-143	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
LIMCCEJA_00561	0.0	-	-	-	S	ko:K13730	ko05100,map05100	ko00000,ko00001	Uncharacterized protein conserved in bacteria (DUF2252)
LIMCCEJA_00562	3.14e-230	rbn	-	-	S	ko:K07058	-	ko00000	Belongs to the UPF0761 family
LIMCCEJA_00563	3.71e-105	fld	-	-	C	ko:K03839	-	ko00000	Flavodoxin
LIMCCEJA_00564	2.34e-204	map	3.4.11.18	-	E	ko:K01265	-	ko00000,ko01000,ko01002	Methionine Aminopeptidase
LIMCCEJA_00565	2.38e-252	-	-	-	M	-	-	-	Glycosyltransferase like family 2
LIMCCEJA_00567	2.12e-40	-	-	-	-	-	-	-	-
LIMCCEJA_00568	6.6e-255	mvaK2	2.7.4.2	-	I	ko:K00938	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	phosphomevalonate kinase
LIMCCEJA_00569	1.37e-219	galU	2.7.7.9	-	M	ko:K00963	ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	UTP-glucose-1-phosphate uridylyltransferase
LIMCCEJA_00570	2.37e-127	-	-	-	N	-	-	-	domain, Protein
LIMCCEJA_00571	0.0	-	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
LIMCCEJA_00572	0.0	bglH	-	-	G	ko:K02755,ko:K02756,ko:K02757	ko02060,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
LIMCCEJA_00573	0.0	-	-	-	S	-	-	-	Bacterial membrane protein YfhO
LIMCCEJA_00574	0.0	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
LIMCCEJA_00575	3.64e-221	yfdH	-	GT2	M	ko:K12999	-	ko00000,ko01000,ko01003,ko01005	Glycosyltransferase, group 2 family protein
LIMCCEJA_00576	5.01e-142	-	-	-	-	-	-	-	-
LIMCCEJA_00577	2.43e-216	yqjA	-	-	S	-	-	-	Putative aromatic acid exporter C-terminal domain
LIMCCEJA_00578	6.22e-43	cspC	-	-	K	ko:K03704	-	ko00000,ko03000	Cold shock protein
LIMCCEJA_00579	2.69e-27	-	-	-	T	-	-	-	PFAM SpoVT AbrB
LIMCCEJA_00580	8.38e-107	yvbK	-	-	K	-	-	-	GNAT family
LIMCCEJA_00581	7.8e-149	acmA	3.2.1.17, 3.2.1.96	-	NU	ko:K01185,ko:K01227	ko00511,map00511	ko00000,ko00001,ko01000	mannosyl-glycoprotein
LIMCCEJA_00582	6.51e-132	xpt	2.4.2.22	-	F	ko:K03816	ko00230,ko01100,ko01110,map00230,map01100,map01110	ko00000,ko00001,ko01000	Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
LIMCCEJA_00583	1.87e-304	pbuX	-	-	F	ko:K03458,ko:K16169	-	ko00000,ko02000	xanthine permease
LIMCCEJA_00584	4.2e-264	purK2	6.3.4.18	-	F	ko:K01589	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
LIMCCEJA_00585	1.93e-316	purB	4.3.2.2	-	F	ko:K01756	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
LIMCCEJA_00587	1.8e-134	-	-	-	-	-	-	-	-
LIMCCEJA_00588	5.8e-167	-	-	-	-	-	-	-	-
LIMCCEJA_00589	0.0	ltaS	2.7.8.20	-	M	ko:K19005	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
LIMCCEJA_00590	1.31e-142	vanZ	-	-	V	-	-	-	VanZ like family
LIMCCEJA_00591	6.61e-196	glcU	-	-	U	ko:K05340	-	ko00000,ko02000	sugar transport
LIMCCEJA_00592	0.0	pgi	5.3.1.9	-	G	ko:K01810	ko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the GPI family
LIMCCEJA_00593	6.26e-290	-	-	-	L	-	-	-	Pfam:Integrase_AP2
LIMCCEJA_00595	1.18e-229	-	-	-	-	-	-	-	-
LIMCCEJA_00596	1.58e-41	-	-	-	-	-	-	-	-
LIMCCEJA_00597	5.03e-95	-	-	-	S	-	-	-	Pyridoxamine 5'-phosphate oxidase
LIMCCEJA_00601	1.59e-152	-	-	-	S	-	-	-	Domain of Unknown Function with PDB structure (DUF3862)
LIMCCEJA_00602	1.02e-100	-	-	-	E	-	-	-	Zn peptidase
LIMCCEJA_00603	2.45e-72	-	-	-	K	-	-	-	Helix-turn-helix domain
LIMCCEJA_00604	5.54e-50	-	-	-	K	-	-	-	Helix-turn-helix domain
LIMCCEJA_00608	3.27e-129	-	-	-	-	-	-	-	-
LIMCCEJA_00610	1.03e-22	-	-	-	-	-	-	-	-
LIMCCEJA_00613	1.02e-202	-	-	-	L	ko:K07455	-	ko00000,ko03400	RecT family
LIMCCEJA_00614	5.2e-172	pi112	-	-	L	-	-	-	PDDEXK-like domain of unknown function (DUF3799)
LIMCCEJA_00615	3.13e-206	-	-	-	L	-	-	-	Replication initiation and membrane attachment
LIMCCEJA_00616	9.26e-103	ssb	-	-	L	ko:K03111	ko03030,ko03430,ko03440,map03030,map03430,map03440	ko00000,ko00001,ko03029,ko03032,ko03400	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
LIMCCEJA_00617	6.14e-09	-	-	-	K	-	-	-	Cro/C1-type HTH DNA-binding domain
LIMCCEJA_00618	5.44e-05	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
LIMCCEJA_00619	6.72e-97	-	-	-	-	-	-	-	-
LIMCCEJA_00620	4.6e-53	-	-	-	-	-	-	-	-
LIMCCEJA_00621	1.72e-75	rusA	-	-	L	-	-	-	Endodeoxyribonuclease RusA
LIMCCEJA_00622	8.94e-49	-	-	-	-	-	-	-	-
LIMCCEJA_00623	1.18e-38	-	-	-	-	-	-	-	-
LIMCCEJA_00624	1.65e-122	-	-	-	S	-	-	-	Protein of unknown function (DUF1642)
LIMCCEJA_00628	5.83e-84	-	-	-	-	-	-	-	-
LIMCCEJA_00631	1.55e-101	-	-	-	-	-	-	-	-
LIMCCEJA_00632	3.19e-286	-	-	-	S	-	-	-	GcrA cell cycle regulator
LIMCCEJA_00633	5.9e-140	-	-	-	L	-	-	-	NUMOD4 motif
LIMCCEJA_00634	2.95e-75	-	-	-	-	-	-	-	-
LIMCCEJA_00635	3.96e-114	-	-	-	L	ko:K07474	-	ko00000	Terminase small subunit
LIMCCEJA_00636	0.0	-	-	-	S	ko:K06909	-	ko00000	Terminase RNAseH like domain
LIMCCEJA_00637	0.0	-	-	-	S	-	-	-	Phage portal protein
LIMCCEJA_00638	9.51e-239	-	-	-	S	-	-	-	head morphogenesis protein, SPP1 gp7 family
LIMCCEJA_00639	3.77e-139	-	-	-	S	-	-	-	Domain of unknown function (DUF4355)
LIMCCEJA_00640	3.31e-238	gpG	-	-	-	-	-	-	-
LIMCCEJA_00641	2.25e-83	-	-	-	S	-	-	-	Phage gp6-like head-tail connector protein
LIMCCEJA_00642	1.98e-68	-	-	-	-	-	-	-	-
LIMCCEJA_00643	2.12e-67	-	-	-	S	-	-	-	Bacteriophage HK97-gp10, putative tail-component
LIMCCEJA_00644	6.75e-92	-	-	-	S	-	-	-	Protein of unknown function (DUF3168)
LIMCCEJA_00645	9.54e-140	-	-	-	S	-	-	-	Phage tail tube protein
LIMCCEJA_00646	3.39e-67	-	-	-	S	-	-	-	Phage tail assembly chaperone protein, TAC
LIMCCEJA_00647	2.71e-74	-	-	-	-	-	-	-	-
LIMCCEJA_00648	0.0	-	-	-	S	-	-	-	phage tail tape measure protein
LIMCCEJA_00649	0.0	-	-	-	S	-	-	-	Phage tail protein
LIMCCEJA_00650	0.0	-	-	-	S	-	-	-	cellulase activity
LIMCCEJA_00651	1.4e-69	-	-	-	-	-	-	-	-
LIMCCEJA_00653	2.09e-63	-	-	-	-	-	-	-	-
LIMCCEJA_00654	2.07e-83	hol	-	-	S	-	-	-	Bacteriophage holin
LIMCCEJA_00655	9.54e-302	-	-	-	M	-	-	-	Glycosyl hydrolases family 25
LIMCCEJA_00656	3.01e-63	ycnE	-	-	S	-	-	-	Antibiotic biosynthesis monooxygenase
LIMCCEJA_00657	4.38e-184	-	-	-	F	ko:K15051	-	ko00000	DNA/RNA non-specific endonuclease
LIMCCEJA_00658	1.88e-107	-	-	-	S	-	-	-	Pfam Transposase IS66
LIMCCEJA_00659	2.76e-294	-	-	GT2,GT4	M	ko:K20444	-	ko00000,ko01000,ko01005,ko02000	Glycosyl transferases group 1
LIMCCEJA_00660	1.88e-221	ysjB	-	-	S	ko:K03810	-	ko00000	Oxidoreductase family, NAD-binding Rossmann fold
LIMCCEJA_00661	4e-110	guaD	-	-	FJ	-	-	-	MafB19-like deaminase
LIMCCEJA_00667	2.13e-274	-	-	-	L	-	-	-	PFAM transposase, IS4 family protein
LIMCCEJA_00669	1.56e-25	-	-	-	-	-	-	-	-
LIMCCEJA_00670	1.53e-126	yttB	-	-	EGP	-	-	-	Major Facilitator
LIMCCEJA_00671	3.71e-140	-	-	-	E	-	-	-	Major Facilitator Superfamily
LIMCCEJA_00672	0.0	pepD2	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
LIMCCEJA_00675	6.59e-171	pgm7	-	-	G	-	-	-	Phosphoglycerate mutase family
LIMCCEJA_00676	1.29e-155	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
LIMCCEJA_00677	0.0	ycfI	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter, ATP-binding protein
LIMCCEJA_00678	0.0	yfiC	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter
LIMCCEJA_00679	1.29e-181	-	-	-	S	-	-	-	NADPH-dependent FMN reductase
LIMCCEJA_00680	5.78e-212	catE	1.13.11.2	-	S	ko:K07104	ko00361,ko00362,ko00622,ko00643,ko01100,ko01120,ko01220,map00361,map00362,map00622,map00643,map01100,map01120,map01220	ko00000,ko00001,ko00002,ko01000	glyoxalase
LIMCCEJA_00681	8.62e-253	ampC	-	-	V	-	-	-	Beta-lactamase
LIMCCEJA_00682	0.0	murE2	6.3.2.13	-	M	ko:K01928	ko00300,ko00550,map00300,map00550	ko00000,ko00001,ko01000,ko01011	Domain of unknown function (DUF1727)
LIMCCEJA_00683	2.02e-144	tdk	2.7.1.21	-	F	ko:K00857	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	thymidine kinase
LIMCCEJA_00684	2.13e-10	relA	2.7.6.5	-	KT	ko:K00951	ko00230,map00230	ko00000,ko00001,ko01000	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
LIMCCEJA_00685	3.51e-251	prfA	-	-	J	ko:K02835	-	ko00000,ko03012	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
LIMCCEJA_00686	1.85e-202	prmC	2.1.1.297	-	J	ko:K02493	-	ko00000,ko01000,ko03012	Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
LIMCCEJA_00687	7.33e-248	ywlC	2.7.7.87	-	J	ko:K07566	-	ko00000,ko01000,ko03009,ko03016	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
LIMCCEJA_00688	1.29e-297	glyA	2.1.2.1	-	E	ko:K00600	ko00260,ko00460,ko00630,ko00670,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko01523,map00260,map00460,map00630,map00670,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map01523	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
LIMCCEJA_00689	1.51e-145	upp	2.4.2.9	-	F	ko:K00761	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
LIMCCEJA_00690	7.1e-162	atpB	-	-	C	ko:K02108	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko03110	it plays a direct role in the translocation of protons across the membrane
LIMCCEJA_00691	3.01e-36	atpE	-	-	C	ko:K02110	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
LIMCCEJA_00692	3.52e-87	atpF	-	-	C	ko:K02109	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
LIMCCEJA_00693	1.67e-117	atpH	-	-	C	ko:K02113	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
LIMCCEJA_00694	0.0	atpA	3.6.3.14	-	C	ko:K02111	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko01000	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
LIMCCEJA_00695	1.78e-211	atpG	-	-	C	ko:K02115	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
LIMCCEJA_00696	3.68e-15	-	-	-	-	-	-	-	-
LIMCCEJA_00697	0.0	atpD	3.6.3.14	-	C	ko:K02112	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko01000	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
LIMCCEJA_00698	6.51e-83	atpC	-	-	C	ko:K02114	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Produces ATP from ADP in the presence of a proton gradient across the membrane
LIMCCEJA_00699	3.55e-43	-	-	-	S	-	-	-	Protein of unknown function (DUF1146)
LIMCCEJA_00700	2.13e-230	mbl	-	-	D	ko:K03569	-	ko00000,ko02048,ko03036,ko04812	Cell shape determining protein MreB Mrl
LIMCCEJA_00701	5.48e-35	-	-	-	S	-	-	-	DNA-directed RNA polymerase subunit beta
LIMCCEJA_00702	1.96e-73	ytjA	-	-	S	ko:K08998	-	ko00000	Could be involved in insertion of integral membrane proteins into the membrane
LIMCCEJA_00703	2.92e-42	-	-	-	S	-	-	-	Protein of unknown function (DUF2969)
LIMCCEJA_00704	1.92e-283	rodA	-	-	D	ko:K05837	-	ko00000,ko03036	Belongs to the SEDS family
LIMCCEJA_00705	1.2e-64	gcsH2	-	-	E	ko:K02437	ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200	ko00000,ko00001,ko00002	glycine cleavage
LIMCCEJA_00706	8.95e-273	-	3.5.1.18	-	E	ko:K01439	ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000	succinyl-diaminopimelate desuccinylase
LIMCCEJA_00707	3.82e-190	-	-	-	P	ko:K02073	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the nlpA lipoprotein family
LIMCCEJA_00708	2.13e-192	-	-	-	P	ko:K02073	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the nlpA lipoprotein family
LIMCCEJA_00709	1.78e-238	metN	-	-	P	ko:K02071	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
LIMCCEJA_00710	5.58e-151	metI	-	-	P	ko:K02072	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
LIMCCEJA_00711	4.15e-184	sufC	-	-	O	ko:K09013	-	ko00000,ko02000	FeS assembly ATPase SufC
LIMCCEJA_00712	3.62e-245	sufD	-	-	O	ko:K07033,ko:K09015	-	ko00000	FeS assembly protein SufD
LIMCCEJA_00713	3.32e-289	sufS	2.8.1.7, 4.4.1.16	-	E	ko:K11717	ko00450,ko01100,map00450,map01100	ko00000,ko00001,ko01000	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
LIMCCEJA_00714	1.42e-102	nifU	-	-	C	ko:K04488	-	ko00000	SUF system FeS assembly protein, NifU family
LIMCCEJA_00715	0.0	sufB	-	-	O	ko:K07033,ko:K09014	-	ko00000	assembly protein SufB
LIMCCEJA_00716	2.14e-36	-	-	-	-	-	-	-	-
LIMCCEJA_00717	4.01e-87	-	-	-	S	-	-	-	Protein of unknown function (DUF1694)
LIMCCEJA_00718	1.5e-231	-	-	-	S	-	-	-	Protein of unknown function (DUF2785)
LIMCCEJA_00719	2.16e-206	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
LIMCCEJA_00720	6.47e-110	uspA	-	-	T	-	-	-	universal stress protein
LIMCCEJA_00721	1.41e-53	-	-	-	-	-	-	-	-
LIMCCEJA_00722	9.18e-305	rarA	-	-	L	ko:K07478	-	ko00000	recombination factor protein RarA
LIMCCEJA_00723	0.0	-	6.3.2.2	-	M	ko:K01919	ko00270,ko00480,ko01100,map00270,map00480,map01100	ko00000,ko00001,ko00002,ko01000	Mur ligase middle domain protein
LIMCCEJA_00724	1.19e-97	XK27_05190	-	-	S	-	-	-	Protein of unknown function (DUF1694)
LIMCCEJA_00725	2.54e-145	yktB	-	-	S	-	-	-	Belongs to the UPF0637 family
LIMCCEJA_00726	1.24e-159	sdaAB	4.3.1.17	-	E	ko:K01752	ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230	ko00000,ko00001,ko01000	Serine dehydratase beta chain
LIMCCEJA_00727	1.49e-194	sdaAA	4.3.1.17	-	E	ko:K01752	ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230	ko00000,ko00001,ko01000	L-serine dehydratase, iron-sulfur-dependent, alpha subunit
LIMCCEJA_00728	1.82e-161	-	-	-	G	-	-	-	Phosphoglycerate mutase family
LIMCCEJA_00729	1.46e-200	mrsA1	1.8.4.11	-	O	ko:K07304	-	ko00000,ko01000	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
LIMCCEJA_00730	9.61e-218	-	-	-	IQ	-	-	-	NAD dependent epimerase/dehydratase family
LIMCCEJA_00731	1.02e-178	pnuC	-	-	H	ko:K03811	-	ko00000,ko02000	nicotinamide mononucleotide transporter
LIMCCEJA_00732	6.87e-172	-	-	-	F	-	-	-	deoxynucleoside kinase
LIMCCEJA_00733	3.46e-204	hisK	3.1.3.15	-	E	ko:K04486	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Histidinol phosphatase and related hydrolases of the PHP family
LIMCCEJA_00734	0.0	oppA	-	-	E	ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
LIMCCEJA_00735	1.2e-206	-	-	-	T	-	-	-	GHKL domain
LIMCCEJA_00736	1.24e-156	-	-	-	T	-	-	-	Transcriptional regulatory protein, C terminal
LIMCCEJA_00737	3.91e-216	bcrA	-	-	V	ko:K01990,ko:K19309	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	AAA domain, putative AbiEii toxin, Type IV TA system
LIMCCEJA_00738	1.12e-168	-	-	-	S	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 family transporter protein
LIMCCEJA_00739	1.26e-209	-	-	-	K	-	-	-	Transcriptional regulator
LIMCCEJA_00740	1.98e-104	yphH	-	-	S	-	-	-	Cupin domain
LIMCCEJA_00741	2.24e-72	-	4.1.1.44	-	S	ko:K01607	ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220	ko00000,ko00001,ko01000	Carboxymuconolactone decarboxylase family
LIMCCEJA_00742	1.35e-142	-	-	-	K	-	-	-	Psort location Cytoplasmic, score
LIMCCEJA_00743	4.58e-213	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
LIMCCEJA_00744	2.4e-112	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
LIMCCEJA_00745	3.57e-200	degV	-	-	S	-	-	-	Uncharacterised protein, DegV family COG1307
LIMCCEJA_00746	4.08e-149	-	-	-	-	-	-	-	-
LIMCCEJA_00747	1.77e-134	desR	-	-	K	ko:K02479,ko:K07693	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	helix_turn_helix, Lux Regulon
LIMCCEJA_00748	2.25e-263	desK	2.7.13.3	-	T	ko:K07778	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
LIMCCEJA_00749	1.94e-168	XK27_09830	-	-	V	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 type transporter
LIMCCEJA_00750	1.15e-205	yvfR	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter
LIMCCEJA_00751	0.0	-	-	-	-	-	-	-	-
LIMCCEJA_00752	5.73e-240	-	-	-	-	-	-	-	-
LIMCCEJA_00753	0.0	-	-	-	D	-	-	-	Putative exonuclease SbcCD, C subunit
LIMCCEJA_00754	6.43e-146	-	-	-	D	-	-	-	Putative exonuclease SbcCD, C subunit
LIMCCEJA_00755	1.77e-197	-	-	-	S	-	-	-	Protein of unknown function C-terminus (DUF2399)
LIMCCEJA_00757	1.57e-233	-	-	-	-	-	-	-	-
LIMCCEJA_00758	0.0	tex	-	-	K	ko:K06959	-	ko00000	Tex-like protein N-terminal domain protein
LIMCCEJA_00759	1.6e-107	-	-	-	-	-	-	-	-
LIMCCEJA_00760	4.16e-181	puuD	-	-	S	ko:K07010	-	ko00000,ko01002	peptidase C26
LIMCCEJA_00761	1.67e-291	-	-	-	E	-	-	-	Amino acid permease
LIMCCEJA_00762	1.45e-120	-	-	-	K	-	-	-	Cro/C1-type HTH DNA-binding domain
LIMCCEJA_00763	0.0	-	-	-	L	-	-	-	AAA domain
LIMCCEJA_00764	5.31e-143	rpsD	-	-	J	ko:K02986	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
LIMCCEJA_00765	4.28e-112	yebR	1.8.4.14	-	T	ko:K08968	ko00270,map00270	ko00000,ko00001,ko01000	GAF domain-containing protein
LIMCCEJA_00766	0.0	ezrA	-	-	D	ko:K06286	-	ko00000,ko03036	modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
LIMCCEJA_00767	3.27e-276	iscS2	2.8.1.7	-	E	ko:K04487	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko02048,ko03016,ko03029	Aminotransferase class V
LIMCCEJA_00768	1.04e-289	thiI	2.8.1.4	-	H	ko:K03151	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko03016	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
LIMCCEJA_00769	2.05e-151	-	-	-	K	ko:K01926	-	ko00000,ko03000	CoA binding domain
LIMCCEJA_00771	0.0	valS	6.1.1.9	-	J	ko:K01873	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
LIMCCEJA_00772	1.43e-310	folC	6.3.2.12, 6.3.2.17	-	H	ko:K11754	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the folylpolyglutamate synthase family
LIMCCEJA_00773	1.45e-150	-	-	-	S	-	-	-	Haloacid dehalogenase-like hydrolase
LIMCCEJA_00774	8.02e-152	radC	-	-	L	ko:K03630	-	ko00000	DNA repair protein
LIMCCEJA_00775	6.84e-229	mreB	-	-	D	ko:K03569	-	ko00000,ko02048,ko03036,ko04812	cell shape determining protein MreB
LIMCCEJA_00776	5.62e-193	mreC	-	-	M	ko:K03570	-	ko00000,ko03036	Involved in formation and maintenance of cell shape
LIMCCEJA_00777	2.13e-113	mreD	-	-	M	ko:K03571	-	ko00000,ko03036	rod shape-determining protein MreD
LIMCCEJA_00778	3.14e-147	minC	-	-	D	ko:K03610	-	ko00000,ko03036,ko04812	Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization
LIMCCEJA_00779	6.07e-182	minD	-	-	D	ko:K03609	-	ko00000,ko03036,ko04812	Belongs to the ParA family
LIMCCEJA_00780	2.77e-141	yecS_2	-	-	P	ko:K02029,ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter permease
LIMCCEJA_00781	1.34e-145	glnQ	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	ABC transporter
LIMCCEJA_00782	1.99e-194	aatB	-	-	ET	ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter substrate-binding protein
LIMCCEJA_00783	0.0	cls	-	-	I	ko:K06131	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
LIMCCEJA_00784	4.32e-14	-	-	-	S	-	-	-	Protein of unknown function (DUF4044)
LIMCCEJA_00785	1.49e-70	-	-	-	-	-	-	-	-
LIMCCEJA_00786	1.61e-101	mraZ	-	-	K	ko:K03925	-	ko00000	Belongs to the MraZ family
LIMCCEJA_00787	2.76e-218	rsmH	2.1.1.199	-	J	ko:K03438	-	ko00000,ko01000,ko03009	Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
LIMCCEJA_00788	8.26e-80	ftsL	-	-	D	-	-	-	cell division protein FtsL
LIMCCEJA_00789	0.0	pbpX	-	-	M	ko:K08724,ko:K12552,ko:K12556	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01011	Penicillin-binding Protein
LIMCCEJA_00790	4.46e-228	mraY	2.7.8.13	-	M	ko:K01000	ko00550,ko01100,ko01502,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
LIMCCEJA_00791	0.0	murD	6.3.2.9	-	M	ko:K01925	ko00471,ko00550,ko01100,map00471,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
LIMCCEJA_00792	1.34e-257	murG	2.4.1.227	GT28	M	ko:K02563	ko00550,ko01100,ko01502,ko04112,map00550,map01100,map01502,map04112	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
LIMCCEJA_00793	4.67e-196	divIB	-	-	D	ko:K03589	ko04112,map04112	ko00000,ko00001,ko03036	Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
LIMCCEJA_00794	5.19e-308	ftsA	-	-	D	ko:K03590	ko04112,map04112	ko00000,ko00001,ko03036,ko04812	Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
LIMCCEJA_00795	1.09e-290	ftsZ	-	-	D	ko:K03531	ko04112,map04112	ko00000,ko00001,ko02048,ko03036,ko04812	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
LIMCCEJA_00796	5.1e-102	sepF	-	-	D	ko:K09772	-	ko00000,ko03036	Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
LIMCCEJA_00797	8.33e-61	yggT	-	-	D	ko:K02221	-	ko00000,ko02044	integral membrane protein
LIMCCEJA_00798	2.83e-187	ylmH	-	-	S	-	-	-	S4 domain protein
LIMCCEJA_00799	6e-116	divIVA	-	-	D	ko:K04074	-	ko00000,ko03036	DivIVA protein
LIMCCEJA_00800	0.0	ileS	6.1.1.5	-	J	ko:K01870	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
LIMCCEJA_00801	2.98e-49	cspB	-	-	K	ko:K03704	-	ko00000,ko03000	Cold shock protein
LIMCCEJA_00802	6.09e-200	pstS	-	-	P	ko:K02040	ko02010,ko02020,ko05152,map02010,map02020,map05152	ko00000,ko00001,ko00002,ko02000	Phosphate
LIMCCEJA_00803	0.0	ydiC1	-	-	EGP	-	-	-	Major Facilitator
LIMCCEJA_00804	6e-268	yaaN	-	-	P	-	-	-	Toxic anion resistance protein (TelA)
LIMCCEJA_00805	1.39e-151	-	-	-	S	-	-	-	5-bromo-4-chloroindolyl phosphate hydrolysis protein
LIMCCEJA_00806	7.71e-128	nudF	3.6.1.13	-	L	ko:K01515	ko00230,map00230	ko00000,ko00001,ko01000	ADP-ribose pyrophosphatase
LIMCCEJA_00807	3.34e-47	-	-	-	-	-	-	-	-
LIMCCEJA_00808	2.38e-160	mtnN	3.2.2.9	-	E	ko:K01243	ko00270,ko01100,ko01230,map00270,map01100,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
LIMCCEJA_00809	5.06e-281	iscS	2.8.1.7	-	E	ko:K04487	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko02048,ko03016,ko03029	Aminotransferase class V
LIMCCEJA_00810	3.61e-77	XK27_04120	-	-	S	-	-	-	Putative amino acid metabolism
LIMCCEJA_00811	0.0	uvrA2	-	-	L	-	-	-	ABC transporter
LIMCCEJA_00812	1.39e-288	mnmA	2.8.1.13	-	J	ko:K00566	ko04122,map04122	ko00000,ko00001,ko01000,ko03016	Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
LIMCCEJA_00814	9.46e-159	pgm6	-	-	G	-	-	-	phosphoglycerate mutase
LIMCCEJA_00815	1.82e-153	-	-	-	S	-	-	-	repeat protein
LIMCCEJA_00816	0.0	recD2	3.1.11.5	-	L	ko:K03581	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
LIMCCEJA_00817	2.35e-311	-	-	-	S	-	-	-	Sterol carrier protein domain
LIMCCEJA_00818	7.21e-236	ytlR	-	-	I	-	-	-	Diacylglycerol kinase catalytic domain
LIMCCEJA_00819	0.0	rnjA	-	-	J	ko:K12574	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
LIMCCEJA_00820	4.07e-43	ykzG	-	-	S	-	-	-	Belongs to the UPF0356 family
LIMCCEJA_00822	1.78e-97	-	-	-	-	-	-	-	-
LIMCCEJA_00823	1.96e-131	def	3.5.1.88	-	J	ko:K01462	-	ko00000,ko01000	Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
LIMCCEJA_00824	1.4e-174	-	-	-	S	-	-	-	E1-E2 ATPase
LIMCCEJA_00825	1.65e-266	pdhA	1.2.4.1	-	C	ko:K00161	ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04922,ko05230,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200,map04066,map04922,map05230	br01601,ko00000,ko00001,ko00002,ko01000	Dehydrogenase E1 component
LIMCCEJA_00826	4.67e-232	pdhB	1.2.4.1	-	C	ko:K00162	ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04922,ko05230,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200,map04066,map04922,map05230	br01601,ko00000,ko00001,ko00002,ko01000	Transketolase, C-terminal domain protein
LIMCCEJA_00827	7.46e-283	pdhC	2.3.1.12	-	C	ko:K00627	ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
LIMCCEJA_00828	0.0	pdhD	1.8.1.4	-	C	ko:K00382	ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000,ko04147	Dehydrogenase
LIMCCEJA_00829	7.16e-201	-	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	L-malate dehydrogenase activity
LIMCCEJA_00830	8.74e-62	yktA	-	-	S	-	-	-	Belongs to the UPF0223 family
LIMCCEJA_00831	2.22e-188	suhB	3.1.3.25	-	G	ko:K01092	ko00521,ko00562,ko01100,ko04070,map00521,map00562,map01100,map04070	ko00000,ko00001,ko00002,ko01000	Belongs to the inositol monophosphatase superfamily
LIMCCEJA_00832	0.0	typA	-	-	T	ko:K06207	-	ko00000	GTP-binding protein TypA
LIMCCEJA_00833	1.31e-268	ftsW	-	-	D	ko:K03588	ko04112,map04112	ko00000,ko00001,ko02000,ko03036	Belongs to the SEDS family
LIMCCEJA_00834	0.0	pyc	6.4.1.1	-	C	ko:K01958	ko00020,ko00620,ko00720,ko01100,ko01120,ko01200,ko01230,map00020,map00620,map00720,map01100,map01120,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
LIMCCEJA_00835	2.84e-75	ylbG	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2129)
LIMCCEJA_00836	2.48e-130	rsmD	2.1.1.171	-	L	ko:K08316	-	ko00000,ko01000,ko03009	RNA methyltransferase, RsmD family
LIMCCEJA_00837	2.96e-111	coaD	2.7.7.3	-	H	ko:K00954	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
LIMCCEJA_00838	2.13e-249	lon	-	-	T	ko:K07177	ko02024,map02024	ko00000,ko00001,ko01002	Belongs to the peptidase S16 family
LIMCCEJA_00839	4.3e-151	comEA	-	-	L	ko:K02237	-	ko00000,ko00002,ko02044	Competence protein ComEA
LIMCCEJA_00840	0.0	comEC	-	-	S	ko:K02238	-	ko00000,ko00002,ko02044	Competence protein ComEC
LIMCCEJA_00841	7.05e-248	holA	2.7.7.7	-	L	ko:K02340	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III delta subunit
LIMCCEJA_00842	1.01e-47	rpsT	-	-	J	ko:K02968	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 16S ribosomal RNA
LIMCCEJA_00843	2.48e-57	rpsO	-	-	J	ko:K02956	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
LIMCCEJA_00844	1.24e-163	-	-	-	-	-	-	-	-
LIMCCEJA_00845	0.0	rnjB	-	-	J	ko:K12574	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
LIMCCEJA_00846	8.8e-209	-	-	-	S	-	-	-	Tetratricopeptide repeat
LIMCCEJA_00847	4.73e-286	tuf	-	-	J	ko:K02358,ko:K15771	ko02010,map02010	ko00000,ko00001,ko00002,ko02000,ko03012,ko03029,ko04147	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
LIMCCEJA_00848	1.27e-65	-	-	-	M	-	-	-	Protein of unknown function (DUF3737)
LIMCCEJA_00849	1.55e-68	-	-	-	M	-	-	-	Protein of unknown function (DUF3737)
LIMCCEJA_00850	1.64e-177	-	-	-	K	ko:K12410	-	ko00000,ko01000	Sir2 family
LIMCCEJA_00851	1.12e-83	pcaC	4.1.1.44	-	S	ko:K01607	ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220	ko00000,ko00001,ko01000	Carboxymuconolactone decarboxylase family
LIMCCEJA_00852	1.02e-85	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
LIMCCEJA_00853	0.0	yknV	-	-	V	ko:K11085	ko02010,map02010	ko00000,ko00001,ko01000,ko02000	ABC transporter
LIMCCEJA_00854	8.34e-271	tig	-	-	D	ko:K03545	-	ko00000	Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
LIMCCEJA_00855	5.9e-297	clpX	-	-	O	ko:K03544	ko04112,map04112	ko00000,ko00001,ko03110	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
LIMCCEJA_00856	5.12e-139	engB	-	-	D	ko:K03978	-	ko00000,ko03036	Necessary for normal cell division and for the maintenance of normal septation
LIMCCEJA_00857	2.28e-63	-	-	-	S	-	-	-	mazG nucleotide pyrophosphohydrolase
LIMCCEJA_00858	2.34e-28	-	-	-	-	-	-	-	-
LIMCCEJA_00859	0.0	glnPH2	-	-	P	ko:K02029,ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter permease
LIMCCEJA_00860	1.33e-172	glnQ	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
LIMCCEJA_00861	0.0	uvrC	-	-	L	ko:K03703	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
LIMCCEJA_00862	0.0	fruA	2.7.1.202	-	GT	ko:K02768,ko:K02769,ko:K02770	ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphotransferase System
LIMCCEJA_00863	2.27e-217	pfkB	2.7.1.56	-	H	ko:K00882	ko00051,map00051	ko00000,ko00001,ko01000	Belongs to the carbohydrate kinase PfkB family. LacC subfamily
LIMCCEJA_00864	5.84e-172	fruR	-	-	K	ko:K03436	-	ko00000,ko03000	DeoR C terminal sensor domain
LIMCCEJA_00865	3.04e-296	obg	-	-	S	ko:K03979	-	ko00000,ko01000,ko03009	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
LIMCCEJA_00866	0.0	oatA	-	-	I	-	-	-	Acyltransferase
LIMCCEJA_00867	3.56e-233	rnz	3.1.26.11	-	J	ko:K00784	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
LIMCCEJA_00868	1.89e-183	yqjQ	-	-	S	ko:K07124	-	ko00000	Enoyl-(Acyl carrier protein) reductase
LIMCCEJA_00869	5.47e-63	-	-	-	S	-	-	-	Lipopolysaccharide assembly protein A domain
LIMCCEJA_00870	0.0	clpB	-	-	O	ko:K03695	ko04213,map04213	ko00000,ko00001,ko03110	Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
LIMCCEJA_00871	1.35e-38	rpmF	-	-	J	ko:K02911	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Belongs to the bacterial ribosomal protein bL32 family
LIMCCEJA_00872	3.37e-123	-	-	-	K	-	-	-	Domain of unknown function (DUF1836)
LIMCCEJA_00873	0.0	ycjM	3.1.3.5, 3.1.3.6, 3.1.4.16	-	F	ko:K01119,ko:K08693	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	5'-nucleotidase, C-terminal domain
LIMCCEJA_00874	4.53e-189	-	-	-	-	-	-	-	-
LIMCCEJA_00875	2.06e-38	-	-	-	S	-	-	-	Protein of unknown function (DUF2929)
LIMCCEJA_00876	0.0	dnaE	2.7.7.7	-	L	ko:K02337	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase
LIMCCEJA_00877	9e-227	pfkA	2.7.1.11	-	F	ko:K00850	ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04152,ko05230,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04152,map05230	ko00000,ko00001,ko00002,ko01000,ko01009,ko03019	Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
LIMCCEJA_00878	0.0	pyk	2.7.1.40	-	G	ko:K00873	ko00010,ko00230,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko04930,ko05165,ko05203,ko05230,map00010,map00230,map00620,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map04930,map05165,map05203,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Belongs to the pyruvate kinase family
LIMCCEJA_00879	6.13e-95	ytwI	-	-	S	-	-	-	Protein of unknown function (DUF441)
LIMCCEJA_00880	1.08e-210	yitL	-	-	S	ko:K00243	-	ko00000	S1 domain
LIMCCEJA_00881	2.09e-212	xerD	-	-	D	ko:K04763	-	ko00000,ko03036	recombinase XerD
LIMCCEJA_00882	2.81e-88	ribT	-	-	K	ko:K02859	-	ko00000	COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
LIMCCEJA_00883	8.93e-163	scpA	-	-	D	ko:K05896	-	ko00000,ko03036	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
LIMCCEJA_00884	3.83e-135	scpB	-	-	D	ko:K06024	-	ko00000,ko03036	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
LIMCCEJA_00885	3.03e-178	rluB	5.4.99.22	-	J	ko:K06178	-	ko00000,ko01000,ko03009	Belongs to the pseudouridine synthase RsuA family
LIMCCEJA_00886	4.54e-125	ribU	-	-	U	-	-	-	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
LIMCCEJA_00887	4.03e-61	fer	-	-	C	ko:K05337	-	ko00000	4Fe-4S single cluster domain of Ferredoxin I
LIMCCEJA_00888	5.09e-238	-	-	-	S	-	-	-	Helix-turn-helix domain
LIMCCEJA_00889	0.0	recQ	3.6.4.12	-	L	ko:K03654	ko03018,map03018	ko00000,ko00001,ko01000,ko03400	ATP-dependent DNA helicase RecQ
LIMCCEJA_00890	9.84e-91	-	-	-	M	-	-	-	Lysin motif
LIMCCEJA_00891	1.89e-150	cmk	2.7.4.25	-	F	ko:K00945	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the cytidylate kinase family. Type 1 subfamily
LIMCCEJA_00892	6.19e-300	rpsA	-	-	J	ko:K02945	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein S1
LIMCCEJA_00893	3.67e-312	der	-	-	S	ko:K03977	-	ko00000,ko03009	GTPase that plays an essential role in the late steps of ribosome biogenesis
LIMCCEJA_00894	1.6e-54	hup	-	-	L	ko:K03530	-	ko00000,ko03032,ko03036,ko03400	Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
LIMCCEJA_00895	1.71e-303	XK27_05225	-	-	S	-	-	-	Tetratricopeptide repeat protein
LIMCCEJA_00896	2.95e-207	ypjC	-	-	S	-	-	-	Uncharacterised 5xTM membrane BCR, YitT family COG1284
LIMCCEJA_00897	2.74e-286	cca	2.7.7.72	-	J	ko:K00974	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
LIMCCEJA_00898	2.08e-110	-	-	-	-	-	-	-	-
LIMCCEJA_00899	0.0	yfmR	-	-	S	ko:K15738	-	ko00000,ko02000	ABC transporter, ATP-binding protein
LIMCCEJA_00900	2.17e-246	thyA	2.1.1.45	-	F	ko:K00560	ko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523	ko00000,ko00001,ko00002,ko01000	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
LIMCCEJA_00901	1.54e-120	folA	1.5.1.3	-	H	ko:K00287	ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523	ko00000,ko00001,ko00002,ko01000	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
LIMCCEJA_00902	4.5e-149	hlyIII	-	-	S	ko:K11068	-	ko00000,ko02042	protein, hemolysin III
LIMCCEJA_00903	1.18e-191	WQ51_01275	-	-	S	-	-	-	EDD domain protein, DegV family
LIMCCEJA_00904	3.87e-202	XK27_03630	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase
LIMCCEJA_00905	4.32e-147	ypmS	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2140)
LIMCCEJA_00906	3.45e-126	msrA	1.8.4.11	-	C	ko:K07304	-	ko00000,ko01000	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
LIMCCEJA_00907	2.52e-55	yozE	-	-	S	-	-	-	Belongs to the UPF0346 family
LIMCCEJA_00908	0.0	ctpA	3.4.21.102	-	M	ko:K03797	-	ko00000,ko01000,ko01002	Belongs to the peptidase S41A family
LIMCCEJA_00909	2.3e-78	XK27_02555	-	-	-	-	-	-	-
LIMCCEJA_00911	2.92e-170	-	-	-	S	-	-	-	Domain of unknown function (DUF4918)
LIMCCEJA_00912	1.35e-204	rbgA	-	-	S	ko:K14540	-	ko00000,ko03009	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
LIMCCEJA_00913	2.13e-180	rnhB	3.1.26.4	-	L	ko:K03470	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
LIMCCEJA_00914	2.8e-190	dprA	-	-	LU	ko:K04096	-	ko00000	DNA protecting protein DprA
LIMCCEJA_00915	0.0	topA	5.99.1.2	-	L	ko:K03168	-	ko00000,ko01000,ko03032,ko03400	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
LIMCCEJA_00916	0.0	trmFO	2.1.1.74	-	J	ko:K04094	-	ko00000,ko01000,ko03016,ko03036	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
LIMCCEJA_00917	1.21e-216	xerC	-	-	D	ko:K03733,ko:K04763	-	ko00000,ko03036	Belongs to the 'phage' integrase family. XerC subfamily
LIMCCEJA_00918	2.06e-119	hslV	3.4.25.2	-	O	ko:K01419	-	ko00000,ko01000,ko01002	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
LIMCCEJA_00919	0.0	hslU	-	-	O	ko:K03667	-	ko00000,ko03110	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
LIMCCEJA_00920	2.78e-221	lacX	5.1.3.3	-	G	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Aldose 1-epimerase
LIMCCEJA_00921	5.07e-143	plsY	2.3.1.15	-	I	ko:K08591	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
LIMCCEJA_00922	0.0	parE	-	-	L	ko:K02622	-	ko00000,ko01000,ko02048,ko03032,ko03036	Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
LIMCCEJA_00923	0.0	parC	-	-	L	ko:K02621	-	ko00000,ko01000,ko02048,ko03032,ko03036	Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
LIMCCEJA_00924	0.0	pflB	2.3.1.54	-	C	ko:K00656	ko00620,ko00640,ko00650,ko01100,ko01120,map00620,map00640,map00650,map01100,map01120	ko00000,ko00001,ko01000	Pyruvate formate lyase-like
LIMCCEJA_00925	3.64e-217	pflA	1.97.1.4	-	C	ko:K04069	-	ko00000,ko01000	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
LIMCCEJA_00926	1.15e-235	-	-	-	K	-	-	-	LysR substrate binding domain
LIMCCEJA_00927	3.94e-221	ppaC	3.6.1.1	-	C	ko:K15986	ko00190,map00190	ko00000,ko00001,ko01000	inorganic pyrophosphatase
LIMCCEJA_00928	7.32e-270	xerS	-	-	L	ko:K04763	-	ko00000,ko03036	Belongs to the 'phage' integrase family
LIMCCEJA_00929	0.0	XK27_05700	-	-	V	ko:K02004,ko:K19084	ko02010,ko02020,map02010,map02020	ko00000,ko00001,ko00002,ko02000	FtsX-like permease family
LIMCCEJA_00930	5.4e-176	XK27_05695	-	-	V	ko:K02003,ko:K19083	ko02010,ko02020,map02010,map02020	ko00000,ko00001,ko00002,ko02000	ABC transporter, ATP-binding protein
LIMCCEJA_00931	1.43e-223	-	-	-	T	-	-	-	Histidine kinase-like ATPases
LIMCCEJA_00932	2.14e-165	-	-	-	T	-	-	-	Transcriptional regulatory protein, C terminal
LIMCCEJA_00933	4.2e-284	-	-	-	EGP	ko:K08217	-	br01600,ko00000,ko01504,ko02000	Transmembrane secretion effector
LIMCCEJA_00934	5.19e-90	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
LIMCCEJA_00935	3.63e-95	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
LIMCCEJA_00936	4.33e-146	-	-	-	C	-	-	-	Nitroreductase family
LIMCCEJA_00937	8.74e-193	yisK	3.7.1.5, 4.1.1.68	-	Q	ko:K05921,ko:K16164	ko00350,ko01100,ko01120,ko01220,map00350,map01100,map01120,map01220	ko00000,ko00001,ko00002,ko01000	Fumarylacetoacetate (FAA) hydrolase family
LIMCCEJA_00938	2.01e-266	hisC	2.6.1.9	-	E	ko:K00817	ko00340,ko00350,ko00360,ko00400,ko00401,ko00960,ko01100,ko01110,ko01130,ko01230,map00340,map00350,map00360,map00400,map00401,map00960,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
LIMCCEJA_00939	5.01e-69	hisE	3.6.1.31	-	E	ko:K01523	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	phosphoribosyl-ATP diphosphatase activity
LIMCCEJA_00940	3.38e-76	hisI	3.5.4.19, 3.6.1.31	-	E	ko:K01496,ko:K11755	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
LIMCCEJA_00941	4.44e-173	hisF	-	-	E	ko:K02500	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
LIMCCEJA_00942	1.05e-174	hisA	5.3.1.16	-	E	ko:K01814	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
LIMCCEJA_00943	3.44e-146	hisH	-	-	E	ko:K02501	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
LIMCCEJA_00944	2.09e-136	hisB	4.2.1.19	-	E	ko:K01693	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	imidazoleglycerol-phosphate dehydratase
LIMCCEJA_00945	1.44e-293	hisD	1.1.1.23	-	E	ko:K00013	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
LIMCCEJA_00946	3.99e-141	hisG	2.4.2.17	-	F	ko:K00765,ko:K02502	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity
LIMCCEJA_00947	3.83e-278	hisZ	-	-	E	ko:K02502	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
LIMCCEJA_00948	1.3e-265	hisC	2.6.1.9	-	E	ko:K00817	ko00340,ko00350,ko00360,ko00400,ko00401,ko00960,ko01100,ko01110,ko01130,ko01230,map00340,map00350,map00360,map00400,map00401,map00960,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Cys/Met metabolism PLP-dependent enzyme
LIMCCEJA_00949	3.8e-130	-	3.6.1.13	-	L	ko:K01515	ko00230,map00230	ko00000,ko00001,ko01000	Belongs to the Nudix hydrolase family
LIMCCEJA_00950	3.08e-207	-	-	-	S	-	-	-	EDD domain protein, DegV family
LIMCCEJA_00952	0.0	FbpA	-	-	K	-	-	-	Fibronectin-binding protein
LIMCCEJA_00953	1.43e-67	-	-	-	S	-	-	-	MazG-like family
LIMCCEJA_00954	3.31e-246	pfoS/R	-	-	S	ko:K07035	-	ko00000	Phosphotransferase system, EIIC
LIMCCEJA_00955	1.9e-145	pyrE	2.4.2.10	-	F	ko:K00762	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
LIMCCEJA_00956	9.32e-164	pyrF	4.1.1.23	-	F	ko:K01591	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
LIMCCEJA_00957	1.02e-197	pyrD	1.3.1.14, 1.3.98.1	-	F	ko:K00226,ko:K17828	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
LIMCCEJA_00958	0.0	carB	6.3.5.5	-	F	ko:K01955	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthase
LIMCCEJA_00959	5.32e-267	carA	6.3.5.5	-	F	ko:K01956	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthetase glutamine chain
LIMCCEJA_00960	4.76e-307	pyrC	3.5.2.3	-	F	ko:K01465	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
LIMCCEJA_00961	5.04e-230	pyrB	2.1.3.2	-	F	ko:K00609	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the ATCase OTCase family
LIMCCEJA_00962	1.15e-299	pyrP	-	-	F	ko:K02824	-	ko00000,ko02000	Permease
LIMCCEJA_00963	7.77e-118	pyrR	2.4.2.9	-	F	ko:K02825	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000,ko03000	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
LIMCCEJA_00965	4.27e-223	rluD	5.4.99.23	-	J	ko:K06180	-	ko00000,ko01000,ko03009	Responsible for synthesis of pseudouridine from uracil
LIMCCEJA_00966	1.4e-106	lspA	3.4.23.36	-	MU	ko:K03101	ko03060,map03060	ko00000,ko00001,ko01000,ko01002	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
LIMCCEJA_00967	0.0	fhs	6.3.4.3	-	F	ko:K01938	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Belongs to the formate--tetrahydrofolate ligase family
LIMCCEJA_00968	3.47e-85	-	-	-	S	-	-	-	Family of unknown function (DUF5322)
LIMCCEJA_00969	5.59e-90	rnhA	3.1.26.4	-	L	ko:K03469	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Ribonuclease HI
LIMCCEJA_00970	1.72e-142	XK27_02070	-	-	S	ko:K07078	-	ko00000	Nitroreductase family
LIMCCEJA_00971	0.0	cls	-	-	I	ko:K06131	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
LIMCCEJA_00972	9.43e-73	-	-	-	-	-	-	-	-
LIMCCEJA_00973	0.0	-	-	-	K	-	-	-	Mga helix-turn-helix domain
LIMCCEJA_00974	1.76e-51	nrdH	-	-	O	ko:K06191	-	ko00000	Glutaredoxin
LIMCCEJA_00975	0.0	nrdE	1.17.4.1	-	F	ko:K00525	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
LIMCCEJA_00976	1.46e-240	nrdF	1.17.4.1	-	F	ko:K00526	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
LIMCCEJA_00977	9.22e-213	lysR	-	-	K	-	-	-	Transcriptional regulator
LIMCCEJA_00978	0.0	pepO	-	-	O	ko:K07386	-	ko00000,ko01000,ko01002	Peptidase family M13
LIMCCEJA_00979	1e-248	lplA	6.3.1.20	-	H	ko:K03800	ko00785,ko01100,map00785,map01100	ko00000,ko00001,ko01000	Lipoate-protein ligase
LIMCCEJA_00980	5.13e-46	-	-	-	-	-	-	-	-
LIMCCEJA_00981	9.34e-225	serA	1.1.1.399, 1.1.1.95	-	EH	ko:K00058	ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
LIMCCEJA_00982	8.68e-278	ypsC	-	-	L	ko:K07444	-	ko00000,ko01000	Belongs to the methyltransferase superfamily
LIMCCEJA_00984	5.37e-88	gpsB	-	-	D	-	-	-	Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
LIMCCEJA_00985	2.28e-138	ypsA	-	-	S	-	-	-	Belongs to the UPF0398 family
LIMCCEJA_00986	1.03e-156	recU	-	-	L	ko:K03700	-	ko00000,ko03400	Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
LIMCCEJA_00987	0.0	ponA	2.4.1.129, 3.4.16.4	GT51	M	ko:K05366	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01003,ko01011	penicillin-binding protein 1A
LIMCCEJA_00988	1.34e-112	comEB	3.5.4.12	-	F	ko:K01493	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko02044	ComE operon protein 2
LIMCCEJA_00989	2.81e-149	nth	4.2.99.18	-	L	ko:K10773	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
LIMCCEJA_00990	5.96e-146	dnaD	-	-	L	ko:K02086	-	ko00000	DnaD domain protein
LIMCCEJA_00991	0.0	asnS	6.1.1.22	-	J	ko:K01893	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Asparaginyl-tRNA synthetase
LIMCCEJA_00992	3.43e-281	aspB	2.6.1.1, 2.6.1.14	-	E	ko:K00812,ko:K22457	ko00220,ko00250,ko00270,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko01000,ko01007	Aminotransferase
LIMCCEJA_00993	2.66e-112	ypmB	-	-	S	-	-	-	Protein conserved in bacteria
LIMCCEJA_00994	0.0	dinG	3.6.4.12	-	L	ko:K03722	-	ko00000,ko01000,ko03400	helicase involved in DNA repair and perhaps also replication
LIMCCEJA_00995	0.0	addA	3.6.4.12	-	L	ko:K16898	-	ko00000,ko01000,ko03400	ATP-dependent helicase nuclease subunit A
LIMCCEJA_00996	0.0	rexB	3.6.4.12	-	L	ko:K16899	-	ko00000,ko01000,ko03400	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
LIMCCEJA_00997	7.57e-215	mvk	2.7.1.36	-	I	ko:K00869	ko00900,ko01100,ko01110,ko01130,ko04146,map00900,map01100,map01110,map01130,map04146	ko00000,ko00001,ko00002,ko01000	mevalonate kinase
LIMCCEJA_00998	1.62e-232	mvaD	4.1.1.33	-	I	ko:K01597	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	diphosphomevalonate decarboxylase
LIMCCEJA_00999	1.81e-250	fni	5.3.3.2	-	C	ko:K01823	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
LIMCCEJA_01000	0.0	rsmF	-	-	J	-	-	-	NOL1 NOP2 sun family protein
LIMCCEJA_01001	3.25e-224	-	-	-	-	-	-	-	-
LIMCCEJA_01002	6.15e-182	-	-	-	-	-	-	-	-
LIMCCEJA_01003	4.01e-80	yitW	-	-	S	-	-	-	Iron-sulfur cluster assembly protein
LIMCCEJA_01004	1.8e-36	dmpI	5.3.2.6	-	G	ko:K01821	ko00362,ko00621,ko00622,ko01100,ko01120,ko01220,map00362,map00621,map00622,map01100,map01120,map01220	ko00000,ko00001,ko00002,ko01000	Belongs to the 4-oxalocrotonate tautomerase family
LIMCCEJA_01005	0.0	-	-	-	V	ko:K06147,ko:K06148	-	ko00000,ko02000	(ABC) transporter
LIMCCEJA_01006	0.0	-	-	-	V	-	-	-	ABC transporter transmembrane region
LIMCCEJA_01007	1.63e-190	yqfO	-	-	S	-	-	-	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
LIMCCEJA_01008	1.1e-165	trmK	2.1.1.217	-	S	ko:K06967	-	ko00000,ko01000,ko03016	SAM-dependent methyltransferase
LIMCCEJA_01009	1.21e-257	sigA	-	-	K	ko:K03086	-	ko00000,ko03021	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
LIMCCEJA_01010	0.0	dnaG	-	-	L	ko:K02316	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
LIMCCEJA_01011	0.0	glyS	6.1.1.14	-	J	ko:K01879	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Glycyl-tRNA synthetase beta subunit
LIMCCEJA_01012	1.96e-224	glyQ	6.1.1.14	-	J	ko:K01878	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	glycyl-tRNA synthetase alpha subunit
LIMCCEJA_01013	8.18e-288	sip	-	-	L	-	-	-	Phage integrase family
LIMCCEJA_01015	8.69e-92	-	-	-	-	-	-	-	-
LIMCCEJA_01016	8.79e-285	-	-	-	M	-	-	-	Glycosyl hydrolases family 25
LIMCCEJA_01017	2.21e-63	-	-	-	S	-	-	-	Bacteriophage holin of superfamily 6 (Holin_LLH)
LIMCCEJA_01018	8.63e-42	-	-	-	-	-	-	-	-
LIMCCEJA_01020	1.99e-69	-	-	-	-	-	-	-	-
LIMCCEJA_01021	0.0	-	-	-	S	-	-	-	cellulase activity
LIMCCEJA_01022	0.0	-	-	-	-	-	-	-	-
LIMCCEJA_01023	0.0	-	-	-	L	-	-	-	Phage tail tape measure protein TP901
LIMCCEJA_01024	5.92e-50	-	-	-	-	-	-	-	-
LIMCCEJA_01025	5.08e-74	-	-	-	S	-	-	-	Phage tail assembly chaperone proteins, TAC
LIMCCEJA_01026	2.61e-147	-	-	-	S	-	-	-	Phage tail tube protein
LIMCCEJA_01027	1.91e-85	-	-	-	S	-	-	-	Protein of unknown function (DUF806)
LIMCCEJA_01028	1.45e-93	-	-	-	S	-	-	-	Bacteriophage HK97-gp10, putative tail-component
LIMCCEJA_01029	7.27e-73	-	-	-	S	-	-	-	Phage head-tail joining protein
LIMCCEJA_01030	9.87e-44	-	-	-	-	-	-	-	-
LIMCCEJA_01031	0.0	-	-	-	S	ko:K06904	-	ko00000	Phage capsid family
LIMCCEJA_01032	3.05e-260	-	-	-	S	-	-	-	Phage portal protein
LIMCCEJA_01034	0.0	-	-	-	S	-	-	-	Phage Terminase
LIMCCEJA_01035	2.32e-104	-	-	-	L	-	-	-	Phage terminase, small subunit
LIMCCEJA_01036	3e-127	tnpR1	-	-	L	-	-	-	Resolvase, N terminal domain
LIMCCEJA_01040	2.18e-91	-	-	-	V	-	-	-	HNH nucleases
LIMCCEJA_01041	1.08e-88	-	-	-	L	-	-	-	Single-strand binding protein family
LIMCCEJA_01042	6.53e-172	-	-	-	-	-	-	-	-
LIMCCEJA_01043	7.26e-11	-	-	-	S	-	-	-	HNH endonuclease
LIMCCEJA_01046	1.45e-124	-	2.3.1.128	-	J	ko:K03790	-	ko00000,ko01000,ko03009	Acetyltransferase (GNAT) domain
LIMCCEJA_01048	1.61e-163	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
LIMCCEJA_01049	9.27e-73	-	-	-	-	-	-	-	-
LIMCCEJA_01050	2.67e-192	recO	-	-	L	ko:K03584	ko03440,map03440	ko00000,ko00001,ko03400	Involved in DNA repair and RecF pathway recombination
LIMCCEJA_01051	2.36e-217	era	-	-	S	ko:K03595	-	ko00000,ko03009,ko03029	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
LIMCCEJA_01052	8.35e-84	cdd	3.5.4.5	-	F	ko:K01489	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis
LIMCCEJA_01053	4.25e-85	dgkA	2.7.1.107, 2.7.1.66	-	M	ko:K00887,ko:K00901	ko00550,ko00561,ko00564,ko01100,ko01110,ko04070,ko04072,ko05231,map00550,map00561,map00564,map01100,map01110,map04070,map04072,map05231	ko00000,ko00001,ko01000	Diacylglycerol kinase
LIMCCEJA_01054	2.52e-107	ybeY	-	-	S	ko:K07042	-	ko00000,ko03009	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
LIMCCEJA_01055	1.14e-229	phoH	-	-	T	ko:K06217	-	ko00000	phosphate starvation-inducible protein PhoH
LIMCCEJA_01056	1.47e-90	yqeY	-	-	S	ko:K09117	-	ko00000	YqeY-like protein
LIMCCEJA_01057	5.66e-29	rpsU	-	-	J	ko:K02970	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bS21 family
LIMCCEJA_01058	4.18e-199	yqfL	2.7.11.33, 2.7.4.28	-	F	ko:K09773	-	ko00000,ko01000	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
LIMCCEJA_01059	4.59e-217	nfo	3.1.21.2	-	L	ko:K01151	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
LIMCCEJA_01060	7.61e-217	yitT	-	-	S	-	-	-	Uncharacterised 5xTM membrane BCR, YitT family COG1284
LIMCCEJA_01061	4.4e-106	msrB	1.8.4.12	-	O	ko:K07305	-	ko00000,ko01000	peptide methionine sulfoxide reductase
LIMCCEJA_01062	0.0	aspS	6.1.1.12	-	J	ko:K01876	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
LIMCCEJA_01063	4.43e-309	hisS	6.1.1.21	-	J	ko:K01892	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	histidyl-tRNA synthetase
LIMCCEJA_01065	0.0	-	-	-	-	-	-	-	-
LIMCCEJA_01066	2.51e-203	-	-	-	V	-	-	-	ABC transporter
LIMCCEJA_01067	2.26e-108	-	-	-	FG	-	-	-	adenosine 5'-monophosphoramidase activity
LIMCCEJA_01068	0.0	lytH	3.5.1.28	-	M	ko:K01448	ko01503,map01503	ko00000,ko00001,ko00002,ko01000,ko01011,ko03036	N-acetylmuramoyl-L-alanine amidase
LIMCCEJA_01069	2.63e-150	-	-	-	J	-	-	-	HAD-hyrolase-like
LIMCCEJA_01070	9.21e-99	dtd	-	-	J	ko:K07560	-	ko00000,ko01000,ko03016	rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
LIMCCEJA_01071	0.0	relA	2.7.6.5	-	KT	ko:K00951	ko00230,map00230	ko00000,ko00001,ko01000	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
LIMCCEJA_01072	1.46e-71	-	-	-	-	-	-	-	-
LIMCCEJA_01073	2.69e-169	rsmE	2.1.1.193	-	J	ko:K09761	-	ko00000,ko01000,ko03009	Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
LIMCCEJA_01074	4.61e-222	prmA	-	-	J	ko:K02687	-	ko00000,ko01000,ko03009	Ribosomal protein L11 methyltransferase
LIMCCEJA_01075	2.1e-114	XK27_03960	-	-	S	-	-	-	Protein of unknown function (DUF3013)
LIMCCEJA_01076	2.26e-143	-	3.2.2.21	-	L	ko:K03652	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Belongs to the DNA glycosylase MPG family
LIMCCEJA_01077	1.1e-50	-	-	-	-	-	-	-	-
LIMCCEJA_01078	6.37e-85	-	-	-	S	-	-	-	Protein of unknown function (DUF1093)
LIMCCEJA_01079	3.45e-37	-	-	-	-	-	-	-	-
LIMCCEJA_01080	3.13e-81	-	-	-	-	-	-	-	-
LIMCCEJA_01082	1.6e-145	-	-	-	S	-	-	-	Flavodoxin-like fold
LIMCCEJA_01083	1.27e-123	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
LIMCCEJA_01085	0.0	-	2.4.1.52	GT4	M	ko:K00712	-	ko00000,ko01000,ko01003	Glycosyl transferases group 1
LIMCCEJA_01087	0.0	-	2.4.1.9, 3.4.24.40	GH68	M	ko:K01406,ko:K20811	ko00500,ko01503,map00500,map01503	ko00000,ko00001,ko01000,ko01002	domain protein
LIMCCEJA_01089	0.0	-	-	-	-	-	-	-	-
LIMCCEJA_01090	3.2e-84	-	-	-	-	-	-	-	-
LIMCCEJA_01094	3.62e-246	-	-	-	-	-	-	-	-
LIMCCEJA_01095	4.53e-197	hutG	3.5.3.8	-	E	ko:K01479	ko00340,ko01100,map00340,map01100	ko00000,ko00001,ko00002,ko01000	N-formylglutamate amidohydrolase
LIMCCEJA_01096	8.85e-72	XK27_08430	-	-	S	-	-	-	Staphylococcal protein of unknown function (DUF960)
LIMCCEJA_01097	2.18e-117	ybaK	-	-	S	ko:K03976	-	ko00000,ko01000,ko03016	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
LIMCCEJA_01098	1.2e-123	apt	2.4.2.7	-	F	ko:K00759	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000,ko04147	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
LIMCCEJA_01099	0.0	recJ	-	-	L	ko:K07462	ko03410,ko03430,ko03440,map03410,map03430,map03440	ko00000,ko00001,ko01000,ko03400	Single-stranded-DNA-specific exonuclease RecJ
LIMCCEJA_01100	2.01e-81	-	-	-	-	-	-	-	-
LIMCCEJA_01101	7.13e-110	-	-	-	S	-	-	-	ASCH
LIMCCEJA_01102	6.91e-45	-	-	-	-	-	-	-	-
LIMCCEJA_01103	0.0	lepA	-	-	M	ko:K03596	ko05134,map05134	ko00000,ko00001	Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
LIMCCEJA_01104	6.01e-268	dnaJ	-	-	O	ko:K03686	-	ko00000,ko03029,ko03110	ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
LIMCCEJA_01105	0.0	dnaK	-	-	O	ko:K04043	ko03018,ko04212,ko05152,map03018,map04212,map05152	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	Heat shock 70 kDa protein
LIMCCEJA_01106	5.93e-128	grpE	-	-	O	ko:K03687	-	ko00000,ko03029,ko03110	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
LIMCCEJA_01107	2.27e-246	hrcA	-	-	K	ko:K03705	-	ko00000,ko03000	Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
LIMCCEJA_01109	8.81e-288	hemN	-	-	H	-	-	-	Involved in the biosynthesis of porphyrin-containing compound
LIMCCEJA_01110	1.89e-226	ribF	2.7.1.26, 2.7.7.2	-	H	ko:K11753	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Belongs to the ribF family
LIMCCEJA_01111	1.65e-213	truB	5.4.99.25	-	J	ko:K03177,ko:K03483	-	ko00000,ko01000,ko03000,ko03016	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
LIMCCEJA_01112	1.91e-152	yceF	-	-	P	ko:K05794	-	ko00000	membrane
LIMCCEJA_01113	1.27e-76	rbfA	-	-	J	ko:K02834	-	ko00000,ko03009	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
LIMCCEJA_01114	0.0	infB	-	-	J	ko:K02519	-	ko00000,ko03012,ko03029	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
LIMCCEJA_01115	1.85e-59	ylxQ	-	-	J	-	-	-	ribosomal protein
LIMCCEJA_01116	2.02e-62	ylxR	-	-	K	ko:K07742	-	ko00000	Protein of unknown function (DUF448)
LIMCCEJA_01117	4.49e-278	nusA	-	-	K	ko:K02600	-	ko00000,ko03009,ko03021	Participates in both transcription termination and antitermination
LIMCCEJA_01118	3.81e-110	rimP	-	-	J	ko:K09748	-	ko00000,ko03009	Required for maturation of 30S ribosomal subunits
LIMCCEJA_01119	0.0	polC	2.7.7.7	-	L	ko:K03763	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
LIMCCEJA_01120	0.0	proS	6.1.1.15	-	J	ko:K01881	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
LIMCCEJA_01121	3.52e-292	rseP	-	-	M	ko:K11749	ko02024,ko04112,map02024,map04112	ko00000,ko00001,ko01000,ko01002	zinc metalloprotease
LIMCCEJA_01122	4.82e-182	cdsA	2.7.7.41	-	S	ko:K00981	ko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070	ko00000,ko00001,ko00002,ko01000	Belongs to the CDS family
LIMCCEJA_01123	3.69e-180	uppS	2.5.1.31	-	H	ko:K00806	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
LIMCCEJA_01124	4.96e-121	frr	-	-	J	ko:K02838	-	ko00000,ko03012	Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
LIMCCEJA_01125	9.72e-166	pyrH	2.7.4.22	-	F	ko:K09903	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphorylation of UMP to UDP
LIMCCEJA_01126	3.28e-200	tsf	-	-	J	ko:K02357	-	ko00000,ko03012,ko03029	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
LIMCCEJA_01127	9.72e-182	rpsB	-	-	J	ko:K02967	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uS2 family
LIMCCEJA_01128	1.29e-63	yazA	-	-	L	ko:K07461	-	ko00000	GIY-YIG catalytic domain protein
LIMCCEJA_01129	1.5e-173	yabB	2.1.1.223	-	L	ko:K07461,ko:K15460	-	ko00000,ko01000,ko03016	Methyltransferase small domain
LIMCCEJA_01130	8.45e-160	plsC	2.3.1.51	-	I	ko:K00655	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Acyltransferase
LIMCCEJA_01131	1.03e-303	yhdG	-	-	E	ko:K03294	-	ko00000	Amino Acid
LIMCCEJA_01132	7.66e-178	yejC	-	-	S	-	-	-	Protein of unknown function (DUF1003)
LIMCCEJA_01133	0.0	mdlB	-	-	V	ko:K06147,ko:K18890	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
LIMCCEJA_01134	0.0	mdlA	-	-	V	ko:K06148,ko:K18889	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
LIMCCEJA_01135	1.39e-40	yneF	-	-	S	ko:K09976	-	ko00000	UPF0154 protein
LIMCCEJA_01136	3.45e-49	ynzC	-	-	S	-	-	-	UPF0291 protein
LIMCCEJA_01137	1.08e-35	-	-	-	-	-	-	-	-
LIMCCEJA_01138	2.64e-05	-	-	-	-	-	-	-	-
LIMCCEJA_01140	1.16e-74	rplS	-	-	J	ko:K02884	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
LIMCCEJA_01141	2.61e-190	trmD	2.1.1.228	-	J	ko:K00554	-	ko00000,ko01000,ko03016	Belongs to the RNA methyltransferase TrmD family
LIMCCEJA_01142	9.14e-122	rimM	-	-	J	ko:K02860	-	ko00000,ko03009	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
LIMCCEJA_01143	2.2e-51	ylqC	-	-	S	ko:K06960	-	ko00000	Belongs to the UPF0109 family
LIMCCEJA_01144	2.97e-59	rpsP	-	-	J	ko:K02959	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Belongs to the bacterial ribosomal protein bS16 family
LIMCCEJA_01145	8.77e-303	ffh	3.6.5.4	-	U	ko:K03106	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko01000,ko02044	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
LIMCCEJA_01146	2.45e-75	ylxM	-	-	S	ko:K09787	-	ko00000	Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
LIMCCEJA_01147	3.74e-36	-	-	-	-	-	-	-	-
LIMCCEJA_01148	1.12e-69	-	-	-	-	-	-	-	-
LIMCCEJA_01149	7.76e-234	ftsY	-	-	U	ko:K03110	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
LIMCCEJA_01150	0.0	smc	-	-	D	ko:K03529	-	ko00000,ko03036	Required for chromosome condensation and partitioning
LIMCCEJA_01151	1.97e-161	rnc	3.1.26.3	-	J	ko:K03685	ko03008,ko05205,map03008,map05205	ko00000,ko00001,ko01000,ko03009,ko03019,ko03036	Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
LIMCCEJA_01152	0.0	oppA1	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
LIMCCEJA_01153	6.51e-196	oppC	-	-	EP	ko:K02034	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
LIMCCEJA_01154	8.93e-223	oppB	-	-	P	ko:K02033,ko:K02034	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
LIMCCEJA_01155	1.39e-229	oppF	-	-	P	ko:K02032	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
LIMCCEJA_01156	2.99e-247	oppD	-	-	P	ko:K02031,ko:K15583	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
LIMCCEJA_01157	9.22e-49	acpP	-	-	IQ	ko:K02078	-	ko00000,ko00001	Carrier of the growing fatty acid chain in fatty acid biosynthesis
LIMCCEJA_01158	1.72e-242	plsX	2.3.1.15	-	I	ko:K03621	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
LIMCCEJA_01159	0.0	recG	3.6.4.12	-	L	ko:K03655	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
LIMCCEJA_01160	0.0	yloV	-	-	S	ko:K07030	-	ko00000	DAK2 domain fusion protein YloV
LIMCCEJA_01161	5.83e-75	yloU	-	-	S	-	-	-	Asp23 family, cell envelope-related function
LIMCCEJA_01162	3.26e-36	rpmB	-	-	J	ko:K02902	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL28 family
LIMCCEJA_01163	5.08e-164	thiN	2.7.6.2	-	H	ko:K00949	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000	thiamine pyrophosphokinase
LIMCCEJA_01164	2.81e-149	rpe	5.1.3.1	-	G	ko:K01783	ko00030,ko00040,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the ribulose-phosphate 3-epimerase family
LIMCCEJA_01165	1.8e-217	rsgA	3.1.3.100	-	S	ko:K06949	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000,ko03009	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
LIMCCEJA_01166	0.0	prkC	2.7.11.1	-	KLT	ko:K08884,ko:K12132	-	ko00000,ko01000,ko01001	serine threonine protein kinase
LIMCCEJA_01167	3.15e-175	stp	3.1.3.16	-	T	ko:K20074	-	ko00000,ko01000,ko01009	phosphatase
LIMCCEJA_01168	0.0	sun	2.1.1.176	-	J	ko:K03500	-	ko00000,ko01000,ko03009	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
LIMCCEJA_01169	1.68e-226	fmt	2.1.2.9	-	J	ko:K00604	ko00670,ko00970,map00670,map00970	ko00000,ko00001,ko01000	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
LIMCCEJA_01170	0.0	priA	-	-	L	ko:K04066	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
LIMCCEJA_01171	6.86e-276	coaBC	4.1.1.36, 6.3.2.5	-	H	ko:K01598,ko:K13038	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
LIMCCEJA_01172	4.4e-47	rpoZ	2.7.7.6	-	K	ko:K03060	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
LIMCCEJA_01173	5.09e-148	gmk	2.7.4.8	-	F	ko:K00942	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko00002,ko01000	Essential for recycling GMP and indirectly, cGMP
LIMCCEJA_01174	2.8e-159	-	-	-	S	ko:K07001	-	ko00000	Patatin-like phospholipase
LIMCCEJA_01175	8.07e-68	-	-	-	-	-	-	-	-
LIMCCEJA_01176	0.0	recN	-	-	L	ko:K03631	-	ko00000,ko03400	May be involved in recombinational repair of damaged DNA
LIMCCEJA_01177	3.59e-97	argR2	-	-	K	ko:K03402	-	ko00000,ko03000	Regulates arginine biosynthesis genes
LIMCCEJA_01178	3.3e-196	rrmJ	2.1.1.226, 2.1.1.227	-	J	ko:K06442	-	ko00000,ko01000,ko03009	Ribosomal RNA large subunit methyltransferase J
LIMCCEJA_01179	1.23e-190	ispA	2.5.1.1, 2.5.1.10, 2.5.1.29	-	H	ko:K13789	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko01006	Belongs to the FPP GGPP synthase family
LIMCCEJA_01180	2.87e-43	xseB	3.1.11.6	-	L	ko:K03602	ko03430,map03430	ko00000,ko00001,ko01000,ko03400	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
LIMCCEJA_01181	1.15e-313	xseA	3.1.11.6	-	L	ko:K03601	ko03430,map03430	ko00000,ko00001,ko01000,ko03400	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
LIMCCEJA_01182	9.8e-197	folD	1.5.1.5, 3.5.4.9	-	F	ko:K01491	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
LIMCCEJA_01183	9.08e-88	nusB	-	-	K	ko:K03625	-	ko00000,ko03009,ko03021	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
LIMCCEJA_01184	7.46e-101	WQ51_04310	-	-	S	ko:K10947	-	ko00000,ko03000	Asp23 family, cell envelope-related function
LIMCCEJA_01185	4.27e-132	efp	-	-	J	ko:K02356	-	ko00000,ko03012	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
LIMCCEJA_01186	6.4e-261	pepP	3.4.11.9, 3.4.13.9	-	E	ko:K01262,ko:K01271	-	ko00000,ko01000,ko01002	Creatinase/Prolidase N-terminal domain
LIMCCEJA_01187	1.6e-63	rpmA	-	-	J	ko:K02899	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL27 family
LIMCCEJA_01188	7.21e-74	ysxB	-	-	J	ko:K07584	-	ko00000	Cysteine protease Prp
LIMCCEJA_01189	1.18e-66	rplU	-	-	J	ko:K02888	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein binds to 23S rRNA in the presence of protein L20
LIMCCEJA_01190	1.88e-43	-	-	-	-	-	-	-	-
LIMCCEJA_01191	1.77e-20	-	-	-	-	-	-	-	-
LIMCCEJA_01192	2.31e-298	-	-	-	S	-	-	-	Membrane
LIMCCEJA_01194	0.0	-	-	-	V	ko:K06147,ko:K06148	-	ko00000,ko02000	ABC transporter transmembrane region
LIMCCEJA_01195	0.0	pepX	3.4.14.11	-	E	ko:K01281	-	ko00000,ko01000,ko01002	Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
LIMCCEJA_01196	0.0	glnA	6.3.1.2	-	E	ko:K01915	ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727	ko00000,ko00001,ko01000,ko04147	glutamine synthetase
LIMCCEJA_01197	5.4e-80	glnR	-	-	K	ko:K03713,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000,ko03000	Transcriptional regulator
LIMCCEJA_01198	0.0	speA	4.1.1.17, 4.1.1.18, 4.1.1.19	-	E	ko:K01581,ko:K01582,ko:K01585	ko00310,ko00330,ko00480,ko00960,ko01100,ko01110,ko01130,map00310,map00330,map00480,map00960,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Orn/Lys/Arg decarboxylase, C-terminal domain
LIMCCEJA_01199	1.21e-307	ynbB	-	-	P	-	-	-	aluminum resistance
LIMCCEJA_01200	1.76e-233	miaA	2.5.1.75	-	F	ko:K00791	ko00908,ko01100,ko01110,map00908,map01100,map01110	ko00000,ko00001,ko01000,ko01006,ko03016	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
LIMCCEJA_01201	9.56e-35	WQ51_02665	-	-	S	-	-	-	Protein of unknown function (DUF3042)
LIMCCEJA_01202	6.47e-95	yqhL	-	-	P	-	-	-	Rhodanese-like protein
LIMCCEJA_01203	1.44e-228	glcK	2.7.1.2	-	G	ko:K00845	ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Glucokinase
LIMCCEJA_01204	1.37e-54	yqgQ	-	-	S	-	-	-	Bacterial protein of unknown function (DUF910)
LIMCCEJA_01205	3.82e-158	gluP	3.4.21.105	-	S	ko:K19225	-	ko00000,ko01000,ko01002	Peptidase, S54 family
LIMCCEJA_01206	0.0	pbp2b	-	-	M	ko:K00687,ko:K12553,ko:K21465,ko:K21466	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01011	Penicillin-binding Protein
LIMCCEJA_01207	0.0	-	-	-	S	-	-	-	Bacterial membrane protein YfhO
LIMCCEJA_01208	1.91e-70	yneR	-	-	S	-	-	-	Belongs to the HesB IscA family
LIMCCEJA_01209	8.32e-149	vraR	-	-	K	ko:K07694,ko:K11618	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	helix_turn_helix, Lux Regulon
LIMCCEJA_01210	4.83e-235	vraS	2.7.13.3	-	T	ko:K07681,ko:K11617	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
LIMCCEJA_01211	3.99e-167	yvqF	-	-	S	ko:K11622	ko02020,map02020	ko00000,ko00001	Cell wall-active antibiotics response 4TMS YvqF
LIMCCEJA_01212	6.1e-101	greA	-	-	K	ko:K03624	-	ko00000,ko03021	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
LIMCCEJA_01213	1.45e-149	udk	2.7.1.48	-	F	ko:K00876	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	Cytidine monophosphokinase
LIMCCEJA_01214	1.17e-268	mltG	-	-	S	ko:K07082	-	ko00000	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
LIMCCEJA_01215	0.0	pheT	6.1.1.20	-	J	ko:K01890	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
LIMCCEJA_01216	4.32e-260	pheS	6.1.1.20	-	J	ko:K01889	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
LIMCCEJA_01217	1.44e-90	yodB	-	-	K	-	-	-	Transcriptional regulator, HxlR family
LIMCCEJA_01218	3.09e-122	XK27_09705	-	-	S	ko:K06950	-	ko00000	Metal dependent phosphohydrolases with conserved 'HD' motif.
LIMCCEJA_01219	7.41e-177	spoU	-	-	J	ko:K03437	-	ko00000,ko03016	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
LIMCCEJA_01220	4.33e-62	acyP	3.6.1.7	-	C	ko:K01512	ko00620,ko00627,ko01120,map00620,map00627,map01120	ko00000,ko00001,ko01000	Belongs to the acylphosphatase family
LIMCCEJA_01221	9.37e-230	yidC	-	-	U	ko:K03217	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044,ko03029	Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
LIMCCEJA_01222	0.0	arlS	2.7.13.3	-	T	ko:K18940	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
LIMCCEJA_01223	1.01e-157	csrR	-	-	K	-	-	-	response regulator
LIMCCEJA_01224	0.0	gnd	1.1.1.343, 1.1.1.44	-	H	ko:K00033	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
LIMCCEJA_01225	2.42e-178	-	-	-	M	-	-	-	Peptidase family M23
LIMCCEJA_01226	2.82e-302	-	-	-	L	-	-	-	Probable transposase
LIMCCEJA_01227	4.98e-24	-	-	-	S	-	-	-	Psort location Cytoplasmic, score
LIMCCEJA_01229	8.69e-127	ylbN	-	-	S	ko:K07040	-	ko00000	Uncharacterized ACR, COG1399
LIMCCEJA_01230	2.37e-270	ylbM	-	-	S	-	-	-	Belongs to the UPF0348 family
LIMCCEJA_01231	1.24e-180	yqeM	-	-	Q	-	-	-	Methyltransferase
LIMCCEJA_01232	1.68e-78	rsfS	-	-	J	ko:K09710	-	ko00000,ko03009	Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
LIMCCEJA_01233	9.21e-142	yqeK	-	-	H	-	-	-	Hydrolase, HD family
LIMCCEJA_01234	1.19e-150	nadD	2.7.7.18	-	H	ko:K00969	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
LIMCCEJA_01235	1.61e-64	yhbY	-	-	J	ko:K07574	-	ko00000,ko03009	RNA-binding protein
LIMCCEJA_01236	1.96e-276	yqeH	-	-	S	ko:K06948	-	ko00000,ko03009	Ribosome biogenesis GTPase YqeH
LIMCCEJA_01237	4.16e-125	yqeG	-	-	S	ko:K07015	-	ko00000	HAD phosphatase, family IIIA
LIMCCEJA_01238	2.58e-225	ykcA	-	-	E	-	-	-	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
LIMCCEJA_01239	2.35e-244	mhqA_2	-	-	E	ko:K15975	-	ko00000	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
LIMCCEJA_01240	2.16e-156	mhqD	-	-	S	ko:K06999	-	ko00000	Dienelactone hydrolase family
LIMCCEJA_01241	7.45e-232	-	-	-	C	-	-	-	Alcohol dehydrogenase GroES-like domain
LIMCCEJA_01242	2.88e-130	-	3.2.2.10	-	S	ko:K06966	ko00230,ko00240,map00230,map00240	ko00000,ko00001,ko01000	Belongs to the LOG family
LIMCCEJA_01243	1.44e-74	rplT	-	-	J	ko:K02887	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
LIMCCEJA_01244	1.13e-36	rpmI	-	-	J	ko:K02916	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL35 family
LIMCCEJA_01245	2.6e-101	infC	-	-	J	ko:K02520	-	ko00000,ko03012,ko03029	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
LIMCCEJA_01246	1.37e-94	-	-	-	K	-	-	-	Transcriptional regulator
LIMCCEJA_01247	3.74e-299	norB	-	-	EGP	ko:K08170	-	ko00000,ko00002,ko01504,ko02000	Major Facilitator Superfamily
LIMCCEJA_01248	7.19e-177	-	-	-	K	ko:K12410	-	ko00000,ko01000	Sir2 family
LIMCCEJA_01249	2.23e-165	-	-	-	S	-	-	-	SseB protein N-terminal domain
LIMCCEJA_01250	7.13e-87	-	-	-	-	-	-	-	-
LIMCCEJA_01251	0.0	thrS	6.1.1.3	-	J	ko:K01868	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
LIMCCEJA_01252	1.59e-290	-	-	-	V	ko:K07454	-	ko00000	regulation of methylation-dependent chromatin silencing
LIMCCEJA_01253	3.91e-217	dnaI	-	-	L	ko:K11144	-	ko00000,ko03032	Primosomal protein DnaI
LIMCCEJA_01254	0.0	dnaB	-	-	L	ko:K03346	-	ko00000,ko03032	replication initiation and membrane attachment
LIMCCEJA_01255	3.55e-104	nrdR	-	-	K	ko:K07738	-	ko00000,ko03000	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
LIMCCEJA_01256	2.42e-133	coaE	2.7.1.24	-	F	ko:K00859	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
LIMCCEJA_01257	5.53e-207	fpg	3.2.2.23, 4.2.99.18	-	L	ko:K10563	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
LIMCCEJA_01258	0.0	polA	2.7.7.7	-	L	ko:K02335	ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440	ko00000,ko00001,ko01000,ko03032,ko03400	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
LIMCCEJA_01259	1.21e-153	ybhL	-	-	S	ko:K06890	-	ko00000	Inhibitor of apoptosis-promoting Bax1
LIMCCEJA_01261	7.99e-253	-	-	-	S	-	-	-	Cell surface protein
LIMCCEJA_01263	1.14e-180	-	-	-	S	-	-	-	WxL domain surface cell wall-binding
LIMCCEJA_01264	0.0	-	-	-	N	-	-	-	domain, Protein
LIMCCEJA_01265	0.0	XK27_00195	-	-	K	-	-	-	Mga helix-turn-helix domain
LIMCCEJA_01266	0.0	murC	6.3.2.8	-	M	ko:K01924	ko00471,ko00550,ko01100,map00471,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Belongs to the MurCDEF family
LIMCCEJA_01267	0.0	sftA	-	-	D	ko:K03466	-	ko00000,ko03036	Belongs to the FtsK SpoIIIE SftA family
LIMCCEJA_01269	8.42e-149	XK27_10290	-	-	J	ko:K06878	-	ko00000	Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
LIMCCEJA_01270	4.38e-72	ytpP	-	-	CO	-	-	-	Thioredoxin
LIMCCEJA_01272	1.11e-154	trmB	2.1.1.33	-	J	ko:K03439	-	ko00000,ko01000,ko03016	Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
LIMCCEJA_01273	3.86e-190	ytmP	-	-	M	-	-	-	Choline/ethanolamine kinase
LIMCCEJA_01274	7.59e-287	ecsB	-	-	U	ko:K01992	-	ko00000,ko00002,ko02000	ABC transporter
LIMCCEJA_01275	1.5e-171	ecsA	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
LIMCCEJA_01276	2.39e-98	hit	-	-	FG	ko:K02503	-	ko00000,ko04147	histidine triad
LIMCCEJA_01277	2.79e-77	-	-	-	S	-	-	-	YtxH-like protein
LIMCCEJA_01278	2.5e-203	prsA	5.2.1.8	-	M	ko:K07533	-	ko00000,ko01000,ko03110	Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
LIMCCEJA_01279	1.25e-233	yhaM	-	-	S	ko:K03698	-	ko00000,ko01000,ko03019	Metal dependent phosphohydrolases with conserved 'HD' motif.
LIMCCEJA_01280	3.88e-73	-	-	-	S	-	-	-	Control of competence regulator ComK, YlbF/YmcA
LIMCCEJA_01281	0.0	pbp2A	2.4.1.129, 3.4.16.4	GT51	M	ko:K12555	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01003,ko01011	penicillin-binding protein
LIMCCEJA_01282	2.16e-202	rluA	5.4.99.23, 5.4.99.28, 5.4.99.29	-	J	ko:K06177,ko:K06180	-	ko00000,ko01000,ko03009,ko03016	Responsible for synthesis of pseudouridine from uracil
LIMCCEJA_01283	3.31e-98	argR1	-	-	K	ko:K03402	-	ko00000,ko03000	Regulates arginine biosynthesis genes
LIMCCEJA_01284	0.0	argS	6.1.1.19	-	J	ko:K01887	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Arginyl-tRNA synthetase
LIMCCEJA_01286	1.97e-88	-	-	-	-	-	-	-	-
LIMCCEJA_01287	4.73e-31	-	-	-	-	-	-	-	-
LIMCCEJA_01288	3.26e-226	pyrD	1.3.5.2, 1.3.98.1	-	F	ko:K00226,ko:K00254	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of dihydroorotate to orotate
LIMCCEJA_01289	0.0	glpQ4	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	phosphodiesterase
LIMCCEJA_01290	9.38e-158	mecA	-	-	NOT	ko:K16511	-	ko00000	Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
LIMCCEJA_01291	1.03e-105	spxA	-	-	K	ko:K16509	-	ko00000	Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
LIMCCEJA_01292	7.19e-180	yhfI	-	-	S	-	-	-	Metallo-beta-lactamase superfamily
LIMCCEJA_01293	2.45e-119	-	-	-	S	-	-	-	Antibiotic biosynthesis monooxygenase
LIMCCEJA_01294	0.0	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter (permease)
LIMCCEJA_01295	5.63e-178	-	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter
LIMCCEJA_01296	9.06e-159	rrp1	-	-	K	ko:K02483	-	ko00000,ko02022	response regulator
LIMCCEJA_01297	1.07e-265	-	-	-	T	ko:K19168	-	ko00000,ko02048	His Kinase A (phosphoacceptor) domain
LIMCCEJA_01298	1.32e-140	nrdG	1.97.1.4	-	O	ko:K04068	-	ko00000,ko01000	Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
LIMCCEJA_01299	0.0	copB	3.6.3.3, 3.6.3.4, 3.6.3.5	-	P	ko:K01533,ko:K01534	-	ko00000,ko01000	P-type ATPase
LIMCCEJA_01300	9.97e-103	copR	-	-	K	ko:K02171	ko01501,map01501	ko00000,ko00001,ko00002,ko01504,ko03000	Copper transport repressor CopY TcrY
LIMCCEJA_01301	2.11e-289	purD	6.3.4.13	-	F	ko:K01945	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the GARS family
LIMCCEJA_01302	0.0	purH	2.1.2.3, 3.5.4.10	-	F	ko:K00602	ko00230,ko00670,ko01100,ko01110,ko01130,ko01523,map00230,map00670,map01100,map01110,map01130,map01523	ko00000,ko00001,ko00002,ko01000,ko04147	Bifunctional purine biosynthesis protein PurH
LIMCCEJA_01303	2.36e-130	purN	2.1.2.2	-	F	ko:K11175	ko00230,ko00670,ko01100,ko01110,ko01130,map00230,map00670,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
LIMCCEJA_01304	3.89e-241	purM	6.3.3.1	-	F	ko:K01933	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Phosphoribosylformylglycinamidine cyclo-ligase
LIMCCEJA_01305	0.0	purF	2.4.2.14	-	F	ko:K00764	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko01002	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
LIMCCEJA_01306	0.0	purL	6.3.5.3	-	F	ko:K01952	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
LIMCCEJA_01307	3.56e-167	purQ	6.3.5.3	-	F	ko:K01952	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
LIMCCEJA_01308	9.52e-56	purS	6.3.5.3	-	F	ko:K01952	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
LIMCCEJA_01309	6.63e-172	purC	6.3.2.6	-	F	ko:K01923	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the SAICAR synthetase family
LIMCCEJA_01310	4.27e-274	purK	6.3.4.18	-	F	ko:K01589	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
LIMCCEJA_01311	1.04e-104	purE	5.4.99.18	-	F	ko:K01588	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
LIMCCEJA_01312	2.72e-135	thiT	-	-	S	ko:K16789	-	ko00000,ko02000	Thiamine transporter protein (Thia_YuaJ)
LIMCCEJA_01313	0.0	iolT	-	-	EGP	ko:K06609	-	ko00000,ko02000	Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family
LIMCCEJA_01314	0.0	ptsI	2.7.3.9	-	G	ko:K08483	ko02060,map02060	ko00000,ko00001,ko01000,ko02000	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
LIMCCEJA_01315	1.02e-51	ptsH	-	-	G	ko:K11189	-	ko00000,ko02000	phosphocarrier protein HPR
LIMCCEJA_01316	6.69e-39	-	-	-	-	-	-	-	-
LIMCCEJA_01317	0.0	clpE	-	-	O	ko:K03697,ko:K04086	-	ko00000,ko03110	Belongs to the ClpA ClpB family
LIMCCEJA_01318	2.87e-62	XK27_09445	-	-	S	-	-	-	Domain of unknown function (DUF1827)
LIMCCEJA_01319	0.0	prfC	-	-	J	ko:K02837	-	ko00000,ko03012	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
LIMCCEJA_01320	1.13e-308	hlyX	-	-	S	ko:K03699	-	ko00000,ko02042	Transporter associated domain
LIMCCEJA_01321	3.07e-264	yueF	-	-	S	-	-	-	AI-2E family transporter
LIMCCEJA_01322	1.96e-98	yjcF	-	-	S	-	-	-	Acetyltransferase (GNAT) domain
LIMCCEJA_01323	1.41e-125	-	-	-	-	-	-	-	-
LIMCCEJA_01324	4.26e-135	ygaC	-	-	J	ko:K07586	-	ko00000	Belongs to the UPF0374 family
LIMCCEJA_01325	2.12e-182	recX	-	-	S	ko:K03565	-	ko00000,ko03400	Regulatory protein RecX
LIMCCEJA_01326	0.0	-	-	-	K	-	-	-	Mga helix-turn-helix domain
LIMCCEJA_01327	2.24e-84	-	-	-	-	-	-	-	-
LIMCCEJA_01328	0.0	rumA_1	2.1.1.190, 2.1.1.35	-	J	ko:K00557,ko:K03215	-	ko00000,ko01000,ko03009,ko03016	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
LIMCCEJA_01329	2.89e-105	-	-	-	F	-	-	-	Nucleoside 2-deoxyribosyltransferase
LIMCCEJA_01330	0.0	poxL	1.2.3.3	-	EH	ko:K00158	ko00620,ko01100,map00620,map01100	ko00000,ko00001,ko01000	Belongs to the TPP enzyme family
LIMCCEJA_01331	2.23e-281	mvaS	2.3.3.10	-	I	ko:K01641	ko00072,ko00280,ko00650,ko00900,ko01100,ko01110,ko01130,map00072,map00280,map00650,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Hydroxymethylglutaryl-CoA synthase
LIMCCEJA_01332	1.24e-279	mvaA	1.1.1.88, 2.3.1.9	-	C	ko:K00054,ko:K00626	ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the HMG-CoA reductase family
LIMCCEJA_01333	1.08e-269	atoB	1.1.1.88, 2.3.1.9	-	I	ko:K00054,ko:K00626	ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the thiolase family
LIMCCEJA_01334	5.09e-66	-	-	-	-	-	-	-	-
LIMCCEJA_01335	3.47e-207	-	-	-	G	-	-	-	Xylose isomerase domain protein TIM barrel
LIMCCEJA_01336	4.44e-134	-	-	-	V	ko:K07448	-	ko00000,ko02048	Restriction endonuclease
LIMCCEJA_01337	2.64e-207	-	-	-	G	-	-	-	Aldose 1-epimerase
LIMCCEJA_01338	2.37e-271	-	3.5.1.18	-	E	ko:K01439	ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000	succinyl-diaminopimelate desuccinylase
LIMCCEJA_01339	8.38e-130	-	-	-	S	-	-	-	ECF transporter, substrate-specific component
LIMCCEJA_01341	1.4e-105	-	-	-	K	-	-	-	FR47-like protein
LIMCCEJA_01342	7.56e-108	ydcK	-	-	S	ko:K03095	-	ko00000	Belongs to the SprT family
LIMCCEJA_01343	5.8e-168	XK27_08845	-	-	S	ko:K05833	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
LIMCCEJA_01344	4.35e-176	XK27_08840	-	-	U	ko:K05832	-	ko00000,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
LIMCCEJA_01345	1.61e-226	XK27_08835	-	-	S	ko:K01989	-	ko00000,ko00002,ko02000	ABC transporter
LIMCCEJA_01346	7.07e-97	-	-	-	-	-	-	-	-
LIMCCEJA_01347	0.0	pacL	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	P-type ATPase
LIMCCEJA_01349	3.03e-277	-	-	-	V	-	-	-	Beta-lactamase
LIMCCEJA_01350	7.18e-195	nadE	6.3.1.5	-	F	ko:K01916	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
LIMCCEJA_01351	1.93e-286	-	-	-	V	-	-	-	Beta-lactamase
LIMCCEJA_01352	0.0	pncB	6.3.4.21	-	F	ko:K00763	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
LIMCCEJA_01353	2.79e-162	yvoA_2	-	-	K	ko:K03710	-	ko00000,ko03000	UbiC transcription regulator-associated domain protein
LIMCCEJA_01354	2.49e-278	nagA	3.5.1.25	-	G	ko:K01443	ko00520,ko01130,map00520,map01130	ko00000,ko00001,ko01000	Belongs to the metallo-dependent hydrolases superfamily. NagA family
LIMCCEJA_01355	1.18e-179	proC	1.5.1.2	-	E	ko:K00286	ko00330,ko01100,ko01110,ko01130,ko01230,map00330,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
LIMCCEJA_01356	0.0	yuxL	3.4.19.1	-	E	ko:K01303	-	ko00000,ko01000,ko01002	Prolyl oligopeptidase family
LIMCCEJA_01357	1.3e-82	-	-	-	D	-	-	-	Domain of Unknown Function (DUF1542)
LIMCCEJA_01358	0.0	-	-	-	K	-	-	-	Mga helix-turn-helix domain
LIMCCEJA_01360	1.71e-203	-	-	-	S	-	-	-	Calcineurin-like phosphoesterase
LIMCCEJA_01361	0.0	dtpT	-	-	U	ko:K03305	-	ko00000	amino acid peptide transporter
LIMCCEJA_01362	0.0	-	-	-	V	ko:K02003,ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
LIMCCEJA_01363	2.43e-87	-	-	-	-	-	-	-	-
LIMCCEJA_01364	2.4e-97	-	-	-	S	-	-	-	function, without similarity to other proteins
LIMCCEJA_01365	0.0	-	-	-	G	-	-	-	MFS/sugar transport protein
LIMCCEJA_01366	1.26e-299	-	3.2.1.51	GH29	G	ko:K01206	ko00511,map00511	ko00000,ko00001,ko01000,ko04147	Alpha-L-fucosidase
LIMCCEJA_01367	3.89e-75	-	-	-	-	-	-	-	-
LIMCCEJA_01368	0.0	pckA	4.1.1.49	-	C	ko:K01610	ko00010,ko00020,ko00620,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00710,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Phosphoenolpyruvate carboxykinase
LIMCCEJA_01369	3.18e-34	-	-	-	S	-	-	-	Virus attachment protein p12 family
LIMCCEJA_01370	0.0	feoB	-	-	P	ko:K04759	-	ko00000,ko02000	transporter of a GTP-driven Fe(2 ) uptake system
LIMCCEJA_01371	1.12e-131	feoA	-	-	P	ko:K04758	-	ko00000,ko02000	FeoA
LIMCCEJA_01372	1.88e-174	-	-	-	E	-	-	-	lipolytic protein G-D-S-L family
LIMCCEJA_01373	1.12e-115	-	-	-	E	-	-	-	AAA domain
LIMCCEJA_01376	2.62e-152	-	-	-	S	ko:K07118	-	ko00000	NAD(P)H-binding
LIMCCEJA_01377	1.95e-118	-	-	-	S	-	-	-	MucBP domain
LIMCCEJA_01378	5.24e-113	-	-	-	-	-	-	-	-
LIMCCEJA_01379	8.24e-289	serS	6.1.1.11	-	J	ko:K01875	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
LIMCCEJA_01380	0.0	-	-	-	K	-	-	-	Mga helix-turn-helix domain
LIMCCEJA_01381	0.0	-	-	-	K	-	-	-	Mga helix-turn-helix domain
LIMCCEJA_01382	0.0	lysP	-	-	E	ko:K03293,ko:K11733	-	ko00000,ko02000	amino acid
LIMCCEJA_01384	1.7e-168	budA	4.1.1.5	-	Q	ko:K01575	ko00650,ko00660,map00650,map00660	ko00000,ko00001,ko01000	Alpha-acetolactate decarboxylase
LIMCCEJA_01385	0.0	alsS	2.2.1.6	-	EH	ko:K01652	ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the TPP enzyme family
LIMCCEJA_01386	1.96e-126	-	-	-	-	-	-	-	-
LIMCCEJA_01387	9.45e-131	yjcK	2.3.1.128	-	J	ko:K03790	-	ko00000,ko01000,ko03009	Acetyltransferase (GNAT) domain
LIMCCEJA_01388	3.49e-244	-	-	-	S	-	-	-	Bacterial protein of unknown function (DUF916)
LIMCCEJA_01389	8.57e-134	-	-	-	-	-	-	-	-
LIMCCEJA_01390	1.43e-25	rpmG	-	-	J	ko:K02913	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL33 family
LIMCCEJA_01391	6.89e-314	-	-	-	S	-	-	-	Fic/DOC family
LIMCCEJA_01392	1.26e-209	yjbO	5.4.99.23	-	J	ko:K06180	-	ko00000,ko01000,ko03009	Responsible for synthesis of pseudouridine from uracil
LIMCCEJA_01393	3.59e-201	-	-	-	I	-	-	-	alpha/beta hydrolase fold
LIMCCEJA_01394	5.53e-90	-	-	-	-	-	-	-	-
LIMCCEJA_01395	8.26e-92	-	-	-	-	-	-	-	-
LIMCCEJA_01396	4.37e-206	citG	2.4.2.52	-	H	ko:K05966	ko02020,map02020	ko00000,ko00001,ko01000	2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase
LIMCCEJA_01397	6.87e-162	citR	-	-	K	-	-	-	FCD
LIMCCEJA_01398	0.0	oadA	4.1.1.3	-	C	ko:K01571	ko00620,ko01100,map00620,map01100	ko00000,ko00001,ko01000,ko02000	Conserved carboxylase domain
LIMCCEJA_01399	4.83e-131	citX	2.7.7.61	-	HI	ko:K05964	ko02020,map02020	ko00000,ko00001,ko01000	Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase
LIMCCEJA_01400	0.0	citF	2.8.3.10	-	H	ko:K01643	ko02020,map02020	ko00000,ko00001,ko01000	Citrate (pro-3S)-lyase alpha chain
LIMCCEJA_01401	1.51e-200	citE	4.1.3.34	-	G	ko:K01644	ko02020,map02020	ko00000,ko00001,ko01000	Belongs to the HpcH HpaI aldolase family
LIMCCEJA_01402	4.85e-65	citD	-	-	C	ko:K01646	ko02020,map02020	ko00000,ko00001	Covalent carrier of the coenzyme of citrate lyase
LIMCCEJA_01403	2.93e-235	citC	6.2.1.22	-	H	ko:K01910	ko02020,map02020	ko00000,ko00001,ko01000	Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
LIMCCEJA_01404	4.63e-07	-	-	-	-	-	-	-	-
LIMCCEJA_01405	1.6e-250	oadB	4.1.1.3	-	C	ko:K01572	ko00620,ko01100,map00620,map01100	ko00000,ko00001,ko01000,ko02000	Na+-transporting oxaloacetate decarboxylase beta subunit
LIMCCEJA_01406	7.15e-58	oadG	-	-	I	-	-	-	Biotin-requiring enzyme
LIMCCEJA_01407	9.87e-70	-	-	-	-	-	-	-	-
LIMCCEJA_01408	2.47e-308	citM	-	-	C	ko:K03300	-	ko00000	Citrate transporter
LIMCCEJA_01409	4.38e-56	-	-	-	-	-	-	-	-
LIMCCEJA_01410	8.4e-132	kptA	-	-	J	ko:K07559	-	ko00000,ko01000,ko03016	Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP- ribose 1''-2''-cyclic phosphate (APPR P). May function as an ADP- ribosylase
LIMCCEJA_01411	8.5e-116	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
LIMCCEJA_01412	2.52e-142	-	1.5.1.40	-	S	ko:K06988	-	ko00000,ko01000	NADP oxidoreductase coenzyme F420-dependent
LIMCCEJA_01413	4.99e-75	padR	-	-	K	ko:K10947	-	ko00000,ko03000	Transcriptional regulator PadR-like family
LIMCCEJA_01414	1.46e-133	ORF00048	-	-	-	-	-	-	-
LIMCCEJA_01415	4.47e-177	nfrA	1.5.1.38	-	C	ko:K19285	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	nitroreductase
LIMCCEJA_01416	2.87e-216	ybhF_1	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter
LIMCCEJA_01417	0.0	-	-	-	M	ko:K01992	-	ko00000,ko00002,ko02000	Exporter of polyketide antibiotics
LIMCCEJA_01418	1.25e-149	-	-	-	K	ko:K09017	-	ko00000,ko03000	Transcriptional regulator
LIMCCEJA_01419	0.0	ypiB	-	-	EGP	-	-	-	Major Facilitator
LIMCCEJA_01420	2.1e-163	-	-	-	S	ko:K07090	-	ko00000	membrane transporter protein
LIMCCEJA_01421	2.73e-240	-	-	-	K	-	-	-	Helix-turn-helix domain
LIMCCEJA_01422	2.44e-209	-	-	-	S	-	-	-	Alpha beta hydrolase
LIMCCEJA_01423	5.73e-82	lexA	-	-	K	ko:K07979	-	ko00000,ko03000	Transcriptional regulator, GntR family
LIMCCEJA_01424	6.34e-166	yhcG	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
LIMCCEJA_01425	1.83e-16	-	-	-	-	-	-	-	-
LIMCCEJA_01426	1.47e-209	-	-	-	P	ko:K10823	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Oligopeptide/dipeptide transporter, C-terminal region
LIMCCEJA_01427	5.22e-255	-	-	-	P	ko:K15583	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Oligopeptide/dipeptide transporter, C-terminal region
LIMCCEJA_01428	6.34e-66	-	-	-	-	-	-	-	-
LIMCCEJA_01429	3.48e-219	-	-	-	P	ko:K02034,ko:K15582	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	N-terminal TM domain of oligopeptide transport permease C
LIMCCEJA_01430	5.52e-215	-	-	-	P	ko:K15581	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
LIMCCEJA_01431	0.0	-	-	-	E	ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding proteins, family 5 Middle
LIMCCEJA_01432	4.7e-52	-	-	-	-	-	-	-	-
LIMCCEJA_01433	0.0	-	-	-	V	-	-	-	ABC transporter transmembrane region
LIMCCEJA_01434	0.0	-	-	-	V	ko:K06147,ko:K06148,ko:K11085,ko:K18889	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter transmembrane region
LIMCCEJA_01435	3.93e-90	-	-	-	S	-	-	-	Iron-sulphur cluster biosynthesis
LIMCCEJA_01436	0.0	XK27_08510	-	-	L	-	-	-	Type III restriction protein res subunit
LIMCCEJA_01437	3.21e-208	-	2.7.1.39	-	S	ko:K02204	ko00260,ko01100,ko01110,ko01120,ko01230,map00260,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Phosphotransferase enzyme family
LIMCCEJA_01438	8.09e-160	zmp3	-	-	O	-	-	-	Zinc-dependent metalloprotease
LIMCCEJA_01439	0.0	-	-	-	M	-	-	-	LysM domain
LIMCCEJA_01441	1.7e-66	lciIC	-	-	K	-	-	-	Helix-turn-helix domain
LIMCCEJA_01443	0.0	-	-	-	L	-	-	-	Reverse transcriptase (RNA-dependent DNA polymerase)
LIMCCEJA_01444	3.82e-149	-	-	-	L	-	-	-	PFAM transposase, IS4 family protein
LIMCCEJA_01446	1.29e-58	XK27_01125	-	-	L	ko:K07484	-	ko00000	PFAM IS66 Orf2 family protein
LIMCCEJA_01447	0.0	-	-	-	L	ko:K07484	-	ko00000	Transposase IS66 family
LIMCCEJA_01449	2.34e-240	-	-	-	-	-	-	-	-
LIMCCEJA_01452	0.0	guaA	6.3.5.2	-	F	ko:K01951	ko00230,ko00983,ko01100,map00230,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko01002	Catalyzes the synthesis of GMP from XMP
LIMCCEJA_01453	3.82e-227	coaA	2.7.1.33	-	F	ko:K00867	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Pantothenic acid kinase
LIMCCEJA_01454	1.99e-71	-	-	-	-	-	-	-	-
LIMCCEJA_01455	3.82e-57	-	-	-	-	-	-	-	-
LIMCCEJA_01456	0.0	pepDA	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
LIMCCEJA_01457	1.44e-109	ykhA	3.1.2.20	-	I	ko:K01073	-	ko00000,ko01000	Thioesterase superfamily
LIMCCEJA_01458	0.0	helD	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	DNA helicase
LIMCCEJA_01460	1.82e-37	-	-	-	-	-	-	-	-
LIMCCEJA_01461	0.0	yjbQ	-	-	P	ko:K03455,ko:K03499	-	ko00000,ko02000	TrkA C-terminal domain protein
LIMCCEJA_01462	3.98e-230	pepR	3.4.11.5	-	E	ko:K01259	ko00330,map00330	ko00000,ko00001,ko01000,ko01002	Releases the N-terminal proline from various substrates
LIMCCEJA_01463	3.31e-108	yjhE	-	-	S	-	-	-	Phage tail protein
LIMCCEJA_01464	6.51e-305	mntH	-	-	P	ko:K03322	-	ko00000,ko02000	H( )-stimulated, divalent metal cation uptake system
LIMCCEJA_01465	3.19e-238	hemH	4.99.1.1, 4.99.1.9	-	H	ko:K01772	ko00860,ko01100,ko01110,map00860,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the ferrous insertion into protoporphyrin IX
LIMCCEJA_01466	4.02e-165	gpm2	-	-	G	-	-	-	Phosphoglycerate mutase family
LIMCCEJA_01467	1.76e-220	rhaD	4.1.2.19	-	H	ko:K01629	ko00040,ko00051,ko01120,map00040,map00051,map01120	ko00000,ko00001,ko01000	Catalyzes the reversible cleavage of L-rhamnulose-1- phosphate to dihydroxyacetone phosphate (DHAP) and L-lactaldehyde
LIMCCEJA_01468	0.0	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	FtsX-like permease family
LIMCCEJA_01469	3.26e-175	cysA	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
LIMCCEJA_01470	0.0	-	-	-	E	-	-	-	Amino Acid
LIMCCEJA_01471	7.89e-213	-	-	-	I	-	-	-	Diacylglycerol kinase catalytic domain
LIMCCEJA_01472	1.12e-304	hflX	-	-	S	ko:K03665	-	ko00000,ko03009	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
LIMCCEJA_01473	2.84e-201	nodB3	-	-	G	-	-	-	Polysaccharide deacetylase
LIMCCEJA_01474	1.44e-127	mnaA	5.1.3.14	-	G	ko:K01791	ko00520,ko01100,ko05111,map00520,map01100,map05111	ko00000,ko00001,ko00002,ko01000,ko01005	Belongs to the UDP-N-acetylglucosamine 2-epimerase family
LIMCCEJA_01475	2.08e-144	mnaA	5.1.3.14	-	G	ko:K01791	ko00520,ko01100,ko05111,map00520,map01100,map05111	ko00000,ko00001,ko00002,ko01000,ko01005	Belongs to the UDP-N-acetylglucosamine 2-epimerase family
LIMCCEJA_01476	3.45e-315	-	-	-	-	-	-	-	-
LIMCCEJA_01477	4.9e-315	-	-	-	-	-	-	-	-
LIMCCEJA_01478	1.16e-119	-	-	-	-	-	-	-	-
LIMCCEJA_01479	1.93e-206	rfbD	1.1.1.133	-	M	ko:K00067	ko00521,ko00523,ko01130,map00521,map00523,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
LIMCCEJA_01480	3.55e-260	rfbB	4.2.1.46	-	M	ko:K01710	ko00521,ko00523,ko00525,ko01055,ko01130,map00521,map00523,map00525,map01055,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
LIMCCEJA_01481	1.55e-140	rfbC	5.1.3.13	-	M	ko:K01790	ko00521,ko00523,ko01130,map00521,map00523,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
LIMCCEJA_01482	2.26e-210	rfbA	2.7.7.24	-	H	ko:K00973	ko00521,ko00523,ko00525,ko01130,map00521,map00523,map00525,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
LIMCCEJA_01483	5.33e-103	-	-	-	M	-	-	-	Glycosyl hydrolases family 25
LIMCCEJA_01484	4.93e-283	-	-	-	M	-	-	-	Glycosyl hydrolases family 25
LIMCCEJA_01486	0.0	cps2E	-	-	M	-	-	-	Bacterial sugar transferase
LIMCCEJA_01487	1.61e-225	cps2D	5.1.3.2, 5.1.3.25	-	M	ko:K01784,ko:K17947	ko00052,ko00520,ko00523,ko01100,ko01130,map00052,map00520,map00523,map01100,map01130	ko00000,ko00001,ko00002,ko01000	RmlD substrate binding domain
LIMCCEJA_01488	7.92e-142	glnP	-	-	P	ko:K10040	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
LIMCCEJA_01489	1.18e-140	glnM	-	-	P	ko:K10040	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
LIMCCEJA_01490	6.12e-191	glnH	-	-	ET	ko:K10039	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
LIMCCEJA_01491	1.05e-172	glnQ	-	-	E	ko:K10041	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
LIMCCEJA_01492	6.79e-222	-	-	-	-	-	-	-	-
LIMCCEJA_01494	1.93e-110	zur	-	-	P	ko:K02076,ko:K03711	-	ko00000,ko03000	Belongs to the Fur family
LIMCCEJA_01495	7.71e-14	-	-	-	-	-	-	-	-
LIMCCEJA_01496	8.86e-145	gmk2	2.7.4.8	-	F	ko:K00942	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko00002,ko01000	Guanylate kinase
LIMCCEJA_01497	2.96e-91	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
LIMCCEJA_01498	1.05e-203	spl	-	-	M	ko:K21471	-	ko00000,ko01000,ko01002,ko01011	NlpC/P60 family
LIMCCEJA_01499	5.84e-312	tyrS	6.1.1.1	-	J	ko:K01866	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
LIMCCEJA_01500	2.89e-19	yeaB	-	-	P	-	-	-	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
LIMCCEJA_01501	4.82e-180	yeaB	-	-	P	-	-	-	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
LIMCCEJA_01502	3.38e-72	-	-	-	K	-	-	-	helix_turn_helix, Arsenical Resistance Operon Repressor
LIMCCEJA_01503	2.2e-222	apbE	2.7.1.180	-	H	ko:K03734	-	ko00000,ko01000	Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
LIMCCEJA_01504	0.0	malZ	3.2.1.20, 3.2.1.41	CBM48,GH13,GH31	G	ko:K01187,ko:K01200	ko00052,ko00500,ko01100,ko01110,map00052,map00500,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 13 family
LIMCCEJA_01505	0.0	glgP	2.4.1.1	GT35	G	ko:K00688	ko00500,ko01100,ko01110,ko02026,ko04217,ko04910,ko04922,ko04931,map00500,map01100,map01110,map02026,map04217,map04910,map04922,map04931	ko00000,ko00001,ko01000	Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
LIMCCEJA_01506	0.0	glgA	2.4.1.21	GT5	F	ko:K00703	ko00500,ko01100,ko01110,ko02026,map00500,map01100,map01110,map02026	ko00000,ko00001,ko00002,ko01000,ko01003	Synthesizes alpha-1,4-glucan chains using ADP-glucose
LIMCCEJA_01507	1.29e-259	glgD	2.7.7.27	-	G	ko:K00975	ko00500,ko00520,ko01100,ko01110,ko02026,map00500,map00520,map01100,map01110,map02026	ko00000,ko00001,ko00002,ko01000	Nucleotidyl transferase
LIMCCEJA_01508	1.51e-254	glgC	2.7.7.27	-	H	ko:K00975	ko00500,ko00520,ko01100,ko01110,ko02026,map00500,map00520,map01100,map01110,map02026	ko00000,ko00001,ko00002,ko01000	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
LIMCCEJA_01509	0.0	glgB	2.4.1.18	CBM48,GH13	G	ko:K00700	ko00500,ko01100,ko01110,map00500,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
LIMCCEJA_01510	1.06e-262	ilvE	2.6.1.42	-	E	ko:K00826	ko00270,ko00280,ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00270,map00280,map00290,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Branched-chain amino acid aminotransferase
LIMCCEJA_01511	1.8e-180	-	-	-	M	-	-	-	Sortase family
LIMCCEJA_01512	3.72e-186	-	-	-	S	-	-	-	Uncharacterised 5xTM membrane BCR, YitT family COG1284
LIMCCEJA_01513	0.0	fbp	3.1.3.11	-	G	ko:K04041	ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	phosphatase activity
LIMCCEJA_01514	3.92e-86	spx2	-	-	P	ko:K16509	-	ko00000	ArsC family
LIMCCEJA_01515	0.0	clpE	-	-	O	ko:K03697,ko:K04086	-	ko00000,ko03110	associated with various cellular activities
LIMCCEJA_01516	5.46e-184	ywqE	3.1.3.48	-	GM	ko:K01104	-	ko00000,ko01000	PHP domain protein
LIMCCEJA_01517	1.03e-205	brpA	-	-	K	-	-	-	Cell envelope-like function transcriptional attenuator common domain protein
LIMCCEJA_01518	2.92e-259	rfbB	4.2.1.46	-	M	ko:K01710	ko00521,ko00523,ko00525,ko01055,ko01130,map00521,map00523,map00525,map01055,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
LIMCCEJA_01519	2.2e-140	rfbC	5.1.3.13	-	M	ko:K01790	ko00521,ko00523,ko01130,map00521,map00523,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
LIMCCEJA_01520	1.54e-135	rfbA	2.7.7.24	-	H	ko:K00973	ko00521,ko00523,ko00525,ko01130,map00521,map00523,map00525,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
LIMCCEJA_01521	1.34e-161	rfbP	-	-	M	-	-	-	Bacterial sugar transferase
LIMCCEJA_01522	3.51e-273	-	-	-	M	-	-	-	PFAM Glycosyl transferases group 1
LIMCCEJA_01523	4.11e-239	-	-	-	M	-	-	-	transferase activity, transferring glycosyl groups
LIMCCEJA_01524	1.94e-217	-	-	GT2	M	ko:K12997	-	ko00000,ko01000,ko01003,ko01005	Glycosyl transferase family 2
LIMCCEJA_01525	1e-271	-	-	-	M	-	-	-	Glycosyl transferases group 1
LIMCCEJA_01526	1.46e-198	cps3J	-	-	M	-	-	-	Domain of unknown function (DUF4422)
LIMCCEJA_01527	0.0	cps1C	-	-	S	ko:K03328	-	ko00000	Membrane protein involved in the export of O-antigen and teichoic acid
LIMCCEJA_01528	1.5e-279	glf	5.4.99.9	-	M	ko:K01854	ko00052,ko00520,map00052,map00520	ko00000,ko00001,ko01000	UDP-galactopyranose mutase
LIMCCEJA_01529	6.92e-280	-	-	-	-	-	-	-	-
LIMCCEJA_01530	1.04e-164	ywqD	-	-	D	-	-	-	Capsular exopolysaccharide family
LIMCCEJA_01531	4.33e-207	epsB	-	-	M	-	-	-	biosynthesis protein
LIMCCEJA_01532	2.59e-171	-	-	-	E	-	-	-	lipolytic protein G-D-S-L family
LIMCCEJA_01533	2.39e-226	-	-	-	K	-	-	-	Protein of unknown function (DUF4065)
LIMCCEJA_01534	1.02e-66	-	-	-	S	-	-	-	Motility quorum-sensing regulator, toxin of MqsA
LIMCCEJA_01535	5.97e-106	ccl	-	-	S	-	-	-	QueT transporter
LIMCCEJA_01536	4.82e-165	fabG	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Enoyl-(Acyl carrier protein) reductase
LIMCCEJA_01537	2.98e-49	XK27_01315	-	-	S	-	-	-	Protein of unknown function (DUF2829)
LIMCCEJA_01538	3.39e-64	-	-	-	K	-	-	-	Cro/C1-type HTH DNA-binding domain
LIMCCEJA_01539	5.28e-152	gpm5	-	-	G	-	-	-	Phosphoglycerate mutase family
LIMCCEJA_01540	7.74e-232	oppF	-	-	P	ko:K10823	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
LIMCCEJA_01541	2.89e-250	oppD	-	-	P	ko:K02031,ko:K15583	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
LIMCCEJA_01542	1.17e-224	oppC	-	-	EP	ko:K15582	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC-type dipeptide oligopeptide nickel transport systems, permease components
LIMCCEJA_01543	1.99e-208	oppB	-	-	P	ko:K15581	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC-type dipeptide oligopeptide nickel transport systems, permease components
LIMCCEJA_01544	0.0	oppA	-	-	E	ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
LIMCCEJA_01545	0.0	-	-	-	EGP	-	-	-	Major Facilitator Superfamily
LIMCCEJA_01546	7.08e-131	efp	-	-	J	ko:K02356	-	ko00000,ko03012	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
LIMCCEJA_01547	1.4e-172	lutC	-	-	S	ko:K00782	-	ko00000	LUD domain
LIMCCEJA_01548	0.0	lutB	-	-	C	ko:K18929	-	ko00000	4Fe-4S dicluster domain
LIMCCEJA_01549	2.94e-191	lutA	-	-	C	ko:K18928	-	ko00000	Cysteine-rich domain
LIMCCEJA_01550	7.96e-133	-	-	-	-	-	-	-	-
LIMCCEJA_01551	6.5e-71	-	2.7.1.196, 2.7.1.205	-	G	ko:K02759	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIA subunit
LIMCCEJA_01552	5.58e-272	ybhE	-	-	S	ko:K09963	-	ko00000	Bacterial protein of unknown function (DUF871)
LIMCCEJA_01553	1.92e-92	-	-	-	S	-	-	-	Domain of unknown function (DUF3284)
LIMCCEJA_01554	0.0	chbC	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
LIMCCEJA_01555	0.0	galA	3.2.1.22	-	G	ko:K07407	ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603	ko00000,ko00001,ko01000	alpha-galactosidase
LIMCCEJA_01556	4.85e-179	XK27_08125	-	-	S	ko:K09861	-	ko00000	Belongs to the UPF0246 family
LIMCCEJA_01557	1.9e-176	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2087)
LIMCCEJA_01558	0.0	-	3.1.11.5	-	L	ko:K03581	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Helix-hairpin-helix containing domain
LIMCCEJA_01559	1.79e-144	-	-	-	-	-	-	-	-
LIMCCEJA_01560	9.73e-131	-	-	-	S	-	-	-	WxL domain surface cell wall-binding
LIMCCEJA_01561	2.91e-187	frlD1	2.7.1.218	-	G	ko:K10710	-	ko00000,ko01000	pfkB family carbohydrate kinase
LIMCCEJA_01562	0.0	-	-	-	G	-	-	-	Phosphodiester glycosidase
LIMCCEJA_01564	0.0	hyuA	-	-	EQ	-	-	-	Hydantoinase/oxoprolinase N-terminal region
LIMCCEJA_01565	2.43e-264	-	-	-	S	ko:K09703	-	ko00000	Protein of unknown function (DUF917)
LIMCCEJA_01566	3.59e-285	-	-	-	F	ko:K10974	-	ko00000,ko02000	Permease for cytosine/purines, uracil, thiamine, allantoin
LIMCCEJA_01567	8.04e-168	-	-	-	-	-	-	-	-
LIMCCEJA_01568	0.0	-	-	-	S	-	-	-	Protein of unknown function (DUF1524)
LIMCCEJA_01569	0.0	-	3.4.21.53	-	O	ko:K01338	ko04112,map04112	ko00000,ko00001,ko01000,ko01002	Putative ATP-dependent Lon protease
LIMCCEJA_01570	0.0	-	-	-	S	-	-	-	PglZ domain
LIMCCEJA_01571	9.6e-60	-	-	-	V	-	-	-	Eco57I restriction-modification methylase
LIMCCEJA_01572	8.7e-257	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
LIMCCEJA_01573	1.49e-227	-	-	-	V	-	-	-	Eco57I restriction-modification methylase
LIMCCEJA_01574	0.0	-	-	-	K	-	-	-	RNA-binding protein homologous to eukaryotic snRNP
LIMCCEJA_01575	8.22e-138	-	-	-	S	-	-	-	Domain of unknown function (DUF1788)
LIMCCEJA_01576	1.16e-135	-	-	-	S	-	-	-	Putative inner membrane protein (DUF1819)
LIMCCEJA_01577	1.42e-270	-	-	-	-	-	-	-	-
LIMCCEJA_01578	0.0	pip	-	-	V	ko:K01421	-	ko00000	domain protein
LIMCCEJA_01579	6.19e-314	pts26BCA	2.7.1.211	-	G	ko:K02808,ko:K02809,ko:K02810	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
LIMCCEJA_01580	1.2e-132	pts26BCA	2.7.1.211	-	G	ko:K02808,ko:K02809,ko:K02810	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
LIMCCEJA_01581	0.0	malL	3.2.1.20	GH31	G	ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Alpha amylase, catalytic domain protein
LIMCCEJA_01582	2.14e-232	purR2	-	-	K	ko:K02529	-	ko00000,ko03000	Periplasmic binding proteins and sugar binding domain of LacI family
LIMCCEJA_01583	0.0	scrB	3.2.1.26	GH32	G	ko:K01193	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	invertase
LIMCCEJA_01585	1.41e-208	-	-	-	GM	-	-	-	NmrA-like family
LIMCCEJA_01586	8.32e-299	cfa	2.1.1.79	-	M	ko:K00574	-	ko00000,ko01000	cyclopropane-fatty-acyl-phospholipid synthase
LIMCCEJA_01587	2.5e-186	accA	2.1.3.15, 6.4.1.2	-	I	ko:K01962	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002,ko01000	alpha subunit
LIMCCEJA_01588	2.72e-197	accD	2.1.3.15, 6.4.1.2	-	I	ko:K01963	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002,ko01000	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
LIMCCEJA_01589	0.0	accC	6.3.4.14, 6.4.1.2	-	I	ko:K01961	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002,ko01000	Acetyl-CoA carboxylase biotin carboxylase subunit
LIMCCEJA_01590	4.77e-100	fabZ	4.2.1.59	-	I	ko:K02372	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
LIMCCEJA_01591	9.15e-90	accB	-	-	I	ko:K02160	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002	first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
LIMCCEJA_01592	2.96e-285	fabF	2.3.1.179	-	I	ko:K09458	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
LIMCCEJA_01593	2.03e-164	fabG	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	reductase
LIMCCEJA_01594	1.25e-211	fabD	2.3.1.39	-	I	ko:K00645,ko:K15327,ko:K15329	ko00061,ko00333,ko01100,ko01130,ko01212,map00061,map00333,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004,ko01008	Malonyl CoA-acyl carrier protein transacylase
LIMCCEJA_01595	3.91e-220	fabK	1.3.1.9	-	S	ko:K02371	ko00061,ko01100,ko01212,map00061,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Nitronate monooxygenase
LIMCCEJA_01596	5.61e-45	acpP	-	-	IQ	ko:K02078	-	ko00000,ko00001	Carrier of the growing fatty acid chain in fatty acid biosynthesis
LIMCCEJA_01597	3.01e-225	fabH	2.3.1.180	-	I	ko:K00648	ko00061,ko01100,ko01212,map00061,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
LIMCCEJA_01598	4.21e-100	-	-	-	K	-	-	-	Winged helix DNA-binding domain
LIMCCEJA_01599	7.93e-94	-	4.2.1.59	-	I	ko:K02372	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	FabA-like domain
LIMCCEJA_01600	7.3e-246	-	-	-	I	-	-	-	carboxylic ester hydrolase activity
LIMCCEJA_01601	7.34e-291	-	-	-	C	-	-	-	Iron-containing alcohol dehydrogenase
LIMCCEJA_01602	1.88e-83	-	-	-	P	-	-	-	Rhodanese-like domain
LIMCCEJA_01603	2.45e-109	-	-	-	K	-	-	-	helix_turn_helix multiple antibiotic resistance protein
LIMCCEJA_01604	9.17e-37	-	-	-	-	-	-	-	-
LIMCCEJA_01605	8.12e-90	-	-	-	K	ko:K18909	-	ko00000,ko00002,ko01504,ko03000	MarR family
LIMCCEJA_01606	3.25e-13	tcaA	-	-	S	ko:K21463	-	ko00000	response to antibiotic
LIMCCEJA_01607	8.41e-236	-	-	-	S	-	-	-	Putative esterase
LIMCCEJA_01608	9.23e-241	-	-	-	-	-	-	-	-
LIMCCEJA_01609	5.56e-136	-	-	-	K	-	-	-	Transcriptional regulator, MarR family
LIMCCEJA_01610	7.19e-113	-	-	-	F	-	-	-	NUDIX domain
LIMCCEJA_01611	1.15e-168	gpmA	5.4.2.11	-	G	ko:K01834	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
LIMCCEJA_01612	9.02e-40	-	-	-	-	-	-	-	-
LIMCCEJA_01613	4.05e-201	-	-	-	S	-	-	-	zinc-ribbon domain
LIMCCEJA_01614	5.46e-258	pbpX	-	-	V	-	-	-	Beta-lactamase
LIMCCEJA_01615	1.77e-239	ydbI	-	-	K	-	-	-	AI-2E family transporter
LIMCCEJA_01616	2.05e-164	srtA	3.4.22.70	-	M	ko:K07284	-	ko00000,ko01000,ko01002,ko01011	Sortase family
LIMCCEJA_01617	3.45e-86	gtcA2	-	-	S	-	-	-	Teichoic acid glycosylation protein
LIMCCEJA_01618	0.0	-	1.2.3.3	-	EH	ko:K00158	ko00620,ko01100,map00620,map01100	ko00000,ko00001,ko01000	Belongs to the TPP enzyme family
LIMCCEJA_01619	3.5e-219	gbuC	-	-	E	ko:K02001,ko:K02002	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	glycine betaine
LIMCCEJA_01620	1.23e-190	gbuB	-	-	E	ko:K02001	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	glycine betaine
LIMCCEJA_01621	1.85e-284	gbuA	3.6.3.32	-	E	ko:K02000	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	glycine betaine
LIMCCEJA_01622	9.41e-175	sfsA	-	-	S	ko:K06206	-	ko00000	Belongs to the SfsA family
LIMCCEJA_01623	1.5e-95	usp1	-	-	T	-	-	-	Universal stress protein family
LIMCCEJA_01624	0.0	yxbA	6.3.1.12	-	S	ko:K17810	-	ko00000,ko01000	ATP-grasp enzyme
LIMCCEJA_01625	8.12e-205	thrB	2.7.1.39	-	F	ko:K00872	ko00260,ko01100,ko01110,ko01120,ko01230,map00260,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
LIMCCEJA_01626	0.0	thrC	4.2.3.1	-	E	ko:K01733	ko00260,ko00750,ko01100,ko01110,ko01120,ko01230,map00260,map00750,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Threonine synthase
LIMCCEJA_01627	5.83e-293	hom	1.1.1.3	-	E	ko:K00003	ko00260,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00270,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	homoserine dehydrogenase
LIMCCEJA_01628	0.0	-	2.7.2.4	-	E	ko:K00928	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the aspartokinase family
LIMCCEJA_01629	4.25e-287	floL	-	-	S	ko:K07192	ko04910,map04910	ko00000,ko00001,ko03036,ko04131,ko04147	SPFH domain / Band 7 family
LIMCCEJA_01630	1.15e-89	-	-	-	-	-	-	-	-
LIMCCEJA_01631	7.76e-130	pfoSR	-	-	S	ko:K07035	-	ko00000	Phosphotransferase system, EIIC
LIMCCEJA_01632	1.86e-81	-	-	-	S	ko:K07035	-	ko00000	Phosphotransferase system, EIIC
LIMCCEJA_01633	5.89e-231	ldhD	1.1.1.28	-	CH	ko:K03778	ko00620,ko01120,map00620,map01120	ko00000,ko00001,ko01000	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
LIMCCEJA_01634	9.79e-279	aspC	2.6.1.57	-	E	ko:K00832,ko:K00841	ko00270,ko00300,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01230,map00270,map00300,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase
LIMCCEJA_01635	2.42e-164	WQ51_05710	-	-	S	-	-	-	Mitochondrial biogenesis AIM24
LIMCCEJA_01636	5.29e-195	-	-	-	S	-	-	-	Alpha/beta hydrolase family
LIMCCEJA_01637	5.33e-135	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
LIMCCEJA_01638	5.37e-221	yeaB	-	-	P	-	-	-	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
LIMCCEJA_01639	0.0	asnB	6.3.5.4	-	E	ko:K01953	ko00250,ko01100,ko01110,map00250,map01100,map01110	ko00000,ko00001,ko01000,ko01002	Asparagine synthase
LIMCCEJA_01640	1.91e-178	ydeA	-	-	S	-	-	-	DJ-1/PfpI family
LIMCCEJA_01641	4.32e-104	yosT	-	-	L	-	-	-	Bacterial transcription activator, effector binding domain
LIMCCEJA_01642	2.25e-265	-	-	-	S	-	-	-	Calcineurin-like phosphoesterase
LIMCCEJA_01643	4.33e-206	menA	2.5.1.74	-	H	ko:K02548	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01006	1,4-dihydroxy-2-naphthoate
LIMCCEJA_01644	2.29e-226	hepT	2.5.1.30	-	H	ko:K00805	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	Belongs to the FPP GGPP synthase family
LIMCCEJA_01645	1.35e-283	ackA	2.7.2.1	-	F	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
LIMCCEJA_01646	1.04e-213	ysdB	-	-	S	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter
LIMCCEJA_01647	1.52e-282	ysdA	-	-	CP	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 family transporter protein
LIMCCEJA_01648	3.94e-85	ytrA	-	-	K	ko:K07979	-	ko00000,ko03000	helix_turn_helix gluconate operon transcriptional repressor
LIMCCEJA_01649	5.32e-208	CcmA	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter
LIMCCEJA_01650	1.19e-149	-	-	-	I	-	-	-	ABC-2 family transporter protein
LIMCCEJA_01651	1.76e-188	gdh	1.1.1.47	-	IQ	ko:K00034	ko00030,ko01120,ko01200,map00030,map01120,map01200	ko00000,ko00001,ko01000	reductase
LIMCCEJA_01652	5.07e-238	bglH	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
LIMCCEJA_01653	1.75e-119	bglH	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
LIMCCEJA_01654	0.0	bglP	-	-	G	ko:K02755,ko:K02756,ko:K02757	ko02060,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
LIMCCEJA_01655	9.88e-205	bglG4	-	-	K	ko:K03488	-	ko00000,ko03000	CAT RNA binding domain
LIMCCEJA_01656	0.0	msbA9	-	-	V	ko:K06148	-	ko00000,ko02000	ABC transporter transmembrane region
LIMCCEJA_01657	0.0	cydD1	-	-	CO	ko:K06147,ko:K06148	-	ko00000,ko02000	ABC transporter transmembrane region
LIMCCEJA_01658	2.22e-98	-	-	-	S	-	-	-	NusG domain II
LIMCCEJA_01659	5.79e-233	-	-	-	M	-	-	-	Peptidoglycan-binding domain 1 protein
LIMCCEJA_01660	1.02e-33	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
LIMCCEJA_01662	1.14e-153	-	-	-	S	-	-	-	CRISPR-associated protein (Cas_Csn2)
LIMCCEJA_01663	2.05e-66	cas2	-	-	L	ko:K09951	-	ko00000,ko02048	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
LIMCCEJA_01664	1.8e-218	cas1	-	-	L	ko:K15342	-	ko00000,ko02048,ko03400	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
LIMCCEJA_01665	0.0	cas9	-	-	L	ko:K09952	-	ko00000,ko01000,ko02048	CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
LIMCCEJA_01666	0.0	cydD	-	-	CO	ko:K16012	ko02010,map02010	ko00000,ko00001,ko02000	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
LIMCCEJA_01667	0.0	cydC	-	-	CO	ko:K16013	ko02010,map02010	ko00000,ko00001,ko02000	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
LIMCCEJA_01668	6.13e-234	cydB	1.10.3.14	-	C	ko:K00426	ko00190,ko01100,ko02020,map00190,map01100,map02020	ko00000,ko00001,ko00002,ko01000	Cytochrome d ubiquinol oxidase subunit II
LIMCCEJA_01669	0.0	cydA	1.10.3.14	-	C	ko:K00425	ko00190,ko01100,ko02020,map00190,map01100,map02020	ko00000,ko00001,ko00002,ko01000	ubiquinol oxidase
LIMCCEJA_01670	2.1e-306	pdp	2.4.2.2	-	F	ko:K00756	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	pyrimidine-nucleoside phosphorylase
LIMCCEJA_01671	2.92e-233	add	3.5.4.2, 3.5.4.4	-	F	ko:K01488,ko:K02029,ko:K21053	ko00230,ko01100,ko05340,map00230,map01100,map05340	ko00000,ko00001,ko00002,ko01000,ko02000	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
LIMCCEJA_01672	1.18e-50	-	-	-	-	-	-	-	-
LIMCCEJA_01673	5.18e-114	-	-	-	-	-	-	-	-
LIMCCEJA_01674	1.57e-34	-	-	-	-	-	-	-	-
LIMCCEJA_01675	1.2e-208	-	-	-	EG	-	-	-	EamA-like transporter family
LIMCCEJA_01676	2.08e-145	tag	3.2.2.20	-	L	ko:K01246	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	glycosylase
LIMCCEJA_01677	2.35e-101	usp5	-	-	T	-	-	-	universal stress protein
LIMCCEJA_01678	8.34e-86	-	-	-	K	-	-	-	Helix-turn-helix domain
LIMCCEJA_01679	3.36e-185	ptp3	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Tyrosine phosphatase family
LIMCCEJA_01680	5.06e-282	queG	1.17.99.6	-	C	ko:K18979	-	ko00000,ko01000,ko03016	Domain of unknown function (DUF1730)
LIMCCEJA_01681	1.8e-83	-	-	-	-	-	-	-	-
LIMCCEJA_01682	3e-115	bioY	-	-	S	ko:K03523	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	BioY family
LIMCCEJA_01684	1.28e-132	-	-	-	Q	-	-	-	methyltransferase
LIMCCEJA_01685	2.96e-146	-	-	-	T	-	-	-	Sh3 type 3 domain protein
LIMCCEJA_01686	1.07e-148	-	-	-	F	-	-	-	glutamine amidotransferase
LIMCCEJA_01687	4.85e-180	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2263)
LIMCCEJA_01688	0.0	yhdP	-	-	S	-	-	-	Transporter associated domain
LIMCCEJA_01689	2.69e-185	-	-	-	S	-	-	-	Alpha beta hydrolase
LIMCCEJA_01690	9.69e-254	-	-	-	I	-	-	-	Acyltransferase
LIMCCEJA_01691	0.0	ycnB	-	-	U	-	-	-	Belongs to the major facilitator superfamily
LIMCCEJA_01692	2.27e-109	-	-	-	S	-	-	-	Domain of unknown function (DUF4811)
LIMCCEJA_01693	1.05e-125	maf	-	-	D	ko:K06287	-	ko00000	nucleoside-triphosphate diphosphatase activity
LIMCCEJA_01694	0.0	mutL	-	-	L	ko:K03572	ko03430,map03430	ko00000,ko00001,ko03400	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
LIMCCEJA_01695	0.0	mutS	-	-	L	ko:K03555	ko03430,map03430	ko00000,ko00001,ko03400	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
LIMCCEJA_01696	0.0	ydaO	-	-	E	-	-	-	amino acid
LIMCCEJA_01697	7.56e-75	-	-	-	S	-	-	-	Domain of unknown function (DUF1827)
LIMCCEJA_01699	0.0	groL	-	-	O	ko:K04077	ko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
LIMCCEJA_01700	1.7e-59	groS	-	-	O	ko:K04078	-	ko00000,ko03029,ko03110	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
LIMCCEJA_01701	4.3e-143	ydiL	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
LIMCCEJA_01702	1.43e-251	brpA	-	-	K	-	-	-	Cell envelope-like function transcriptional attenuator common domain protein
LIMCCEJA_01703	3.24e-250	-	-	-	-	-	-	-	-
LIMCCEJA_01704	4.35e-206	-	-	-	V	ko:K01990,ko:K16921	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
LIMCCEJA_01705	7.06e-81	ytrA	-	-	K	ko:K07979	-	ko00000,ko03000	helix_turn_helix gluconate operon transcriptional repressor
LIMCCEJA_01706	7.76e-152	rex	-	-	K	ko:K01926	-	ko00000,ko03000	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
LIMCCEJA_01707	0.0	ydiF	-	-	S	ko:K06158	-	ko00000,ko03012	ABC transporter, ATP-binding protein
LIMCCEJA_01708	6.92e-66	ptcB	2.7.1.196, 2.7.1.205	-	G	ko:K02760	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
LIMCCEJA_01709	4.36e-240	tsaD	2.3.1.234	-	J	ko:K01409	-	ko00000,ko01000,ko03016	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
LIMCCEJA_01710	1.29e-128	rimI	2.3.1.128	-	K	ko:K03789	-	ko00000,ko01000,ko03009	Ribosomal-protein-alanine acetyltransferase
LIMCCEJA_01711	1.33e-168	yeaZ	2.3.1.234	-	O	ko:K01409,ko:K14742	-	ko00000,ko01000,ko03016	Universal bacterial protein YeaZ
LIMCCEJA_01712	1.23e-160	-	-	-	-	-	-	-	-
LIMCCEJA_01713	1.32e-16	-	-	-	-	-	-	-	-
LIMCCEJA_01714	4.02e-116	-	-	-	T	-	-	-	ECF transporter, substrate-specific component
LIMCCEJA_01715	3.04e-232	ansB	3.5.1.1	-	EJ	ko:K01424	ko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110	ko00000,ko00001,ko01000	Asparaginase
LIMCCEJA_01716	9.48e-186	fat	3.1.2.21	-	I	ko:K01071	ko00061,ko01100,map00061,map01100	ko00000,ko00001,ko01000,ko01004	Acyl-ACP thioesterase
LIMCCEJA_01717	5.67e-197	rsmI	2.1.1.198	-	H	ko:K07056	-	ko00000,ko01000,ko03009	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
LIMCCEJA_01718	2.27e-75	yabA	-	-	L	-	-	-	Involved in initiation control of chromosome replication
LIMCCEJA_01719	2.04e-226	holB	2.7.7.7	-	L	ko:K02341	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III
LIMCCEJA_01720	2.31e-69	yaaQ	-	-	S	-	-	-	Cyclic-di-AMP receptor
LIMCCEJA_01721	3.17e-150	tmk	2.7.4.9	-	F	ko:K00943	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
LIMCCEJA_01722	1.35e-51	-	-	-	S	-	-	-	Protein of unknown function (DUF2508)
LIMCCEJA_01723	2.17e-140	recR	-	-	L	ko:K06187	ko03440,map03440	ko00000,ko00001,ko03400	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
LIMCCEJA_01724	2.29e-50	yaaK	-	-	S	ko:K09747	-	ko00000	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
LIMCCEJA_01725	0.0	dnaX	2.7.7.7	-	L	ko:K02343	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
LIMCCEJA_01726	6.49e-116	tadA	3.5.4.33	-	F	ko:K11991	-	ko00000,ko01000,ko03016	Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
LIMCCEJA_01727	2.82e-65	-	-	-	-	-	-	-	-
LIMCCEJA_01728	5.76e-140	rsmC	2.1.1.172	-	J	ko:K00564	-	ko00000,ko01000,ko03009	Methyltransferase
LIMCCEJA_01729	0.0	mprF	2.3.2.3	-	S	ko:K14205	ko01503,ko02020,ko05150,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01000,ko01504	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
LIMCCEJA_01730	9.88e-91	-	-	-	-	-	-	-	-
LIMCCEJA_01731	2.2e-223	ccpB	-	-	K	-	-	-	lacI family
LIMCCEJA_01732	0.0	prtB	3.4.21.96	-	O	ko:K01361	-	ko00000,ko01000,ko01002,ko03110	Belongs to the peptidase S8 family
LIMCCEJA_01733	4.14e-202	-	5.2.1.8	-	M	ko:K07533	-	ko00000,ko01000,ko03110	Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
LIMCCEJA_01734	3.91e-74	rplL	-	-	J	ko:K02935	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
LIMCCEJA_01735	6.19e-109	rplJ	-	-	J	ko:K02864	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
LIMCCEJA_01736	1.04e-287	mdtG	-	-	EGP	ko:K08161	-	ko00000,ko02000	Transporter, major facilitator family protein
LIMCCEJA_01737	1.2e-201	-	-	-	K	-	-	-	acetyltransferase
LIMCCEJA_01738	8.38e-118	-	-	-	-	-	-	-	-
LIMCCEJA_01739	1.07e-283	yceI	-	-	G	ko:K08369	-	ko00000,ko02000	Sugar (and other) transporter
LIMCCEJA_01740	0.0	-	-	-	-	-	-	-	-
LIMCCEJA_01741	6.93e-64	-	-	-	-	-	-	-	-
LIMCCEJA_01742	0.0	-	2.4.1.52	GT4	M	ko:K00712	-	ko00000,ko01000,ko01003	Glycosyl transferases group 1
LIMCCEJA_01743	0.0	tagE	2.4.1.52	GT4	M	ko:K00712	-	ko00000,ko01000,ko01003	An N-acetylglucosaminyl transferase that is part of the accessory SecA2 SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon
LIMCCEJA_01744	0.0	gabD	1.2.1.16, 1.2.1.20, 1.2.1.79	-	C	ko:K00135	ko00250,ko00310,ko00350,ko00650,ko00760,ko01100,ko01120,map00250,map00310,map00350,map00650,map00760,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Belongs to the aldehyde dehydrogenase family
LIMCCEJA_01745	6.11e-129	yqaB	-	-	S	-	-	-	Acetyltransferase (GNAT) domain
LIMCCEJA_01746	1.33e-158	rplA	-	-	J	ko:K02863	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
LIMCCEJA_01747	1.97e-92	rplK	-	-	J	ko:K02867	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
LIMCCEJA_01748	0.0	mgtA	3.6.3.2	-	P	ko:K01531	-	ko00000,ko01000	COG0474 Cation transport ATPase
LIMCCEJA_01749	0.0	nylA	3.5.1.4	-	J	ko:K01426	ko00330,ko00360,ko00380,ko00627,ko00643,ko01120,map00330,map00360,map00380,map00627,map00643,map01120	ko00000,ko00001,ko01000	Belongs to the amidase family
LIMCCEJA_01750	2.14e-123	yvqK	2.5.1.17	-	S	ko:K00798	ko00860,ko01100,map00860,map01100	ko00000,ko00001,ko00002,ko01000	Cobalamin adenosyltransferase
LIMCCEJA_01751	2.2e-117	-	-	-	S	ko:K16927	-	ko00000,ko00002,ko02000	ECF transporter, substrate-specific component
LIMCCEJA_01752	2.89e-82	-	-	-	S	-	-	-	Domain of unknown function (DUF4430)
LIMCCEJA_01753	0.0	rtpR	1.17.4.2	-	F	ko:K00527	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000	ribonucleoside-triphosphate reductase activity
LIMCCEJA_01754	6.51e-103	-	2.4.2.6	-	F	ko:K08728	ko00240,map00240	ko00000,ko00001,ko01000	nucleoside 2-deoxyribosyltransferase
LIMCCEJA_01755	5.74e-204	-	-	-	S	-	-	-	Alpha/beta hydrolase of unknown function (DUF915)
LIMCCEJA_01756	8e-131	nusG	-	-	K	ko:K02601	-	ko00000,ko03009,ko03021	Participates in transcription elongation, termination and antitermination
LIMCCEJA_01757	2.53e-31	secE	-	-	U	ko:K03073	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
LIMCCEJA_01758	3.75e-30	rpmG	-	-	J	ko:K02913	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL33 family
LIMCCEJA_01759	4.78e-222	ubiA	2.5.1.74	-	H	ko:K02548	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01006	1,4-dihydroxy-2-naphthoate
LIMCCEJA_01760	3.19e-212	menA	2.5.1.74	-	M	ko:K02548	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01006	UbiA prenyltransferase family
LIMCCEJA_01761	2.9e-252	apbE	2.7.1.180	-	H	ko:K03734	-	ko00000,ko01000	Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
LIMCCEJA_01762	2.67e-295	tnpB	-	-	L	ko:K07496	-	ko00000	Putative transposase DNA-binding domain
LIMCCEJA_01763	7.5e-190	cad	-	-	S	ko:K20379	ko02024,map02024	ko00000,ko00001	FMN_bind
LIMCCEJA_01764	0.0	ndh	1.6.99.3	-	C	ko:K03885	ko00190,map00190	ko00000,ko00001,ko01000	NADH dehydrogenase
LIMCCEJA_01765	2.87e-106	-	-	-	S	-	-	-	NusG domain II
LIMCCEJA_01766	7.23e-128	hepA	2.5.1.30	-	S	ko:K00805	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	Heptaprenyl diphosphate synthase component I
LIMCCEJA_01767	9.42e-232	hepT	2.5.1.30, 2.5.1.83	-	H	ko:K00805,ko:K21275	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	Belongs to the FPP GGPP synthase family
LIMCCEJA_01768	1.21e-109	-	-	-	-	-	-	-	-
LIMCCEJA_01769	1.2e-196	prpA3	3.1.3.16	-	T	ko:K01090	-	ko00000,ko01000	Calcineurin-like phosphoesterase superfamily domain
LIMCCEJA_01770	4.09e-125	-	-	-	-	-	-	-	-
LIMCCEJA_01771	3.21e-212	-	-	-	-	-	-	-	-
LIMCCEJA_01772	5.07e-203	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
LIMCCEJA_01773	7.53e-285	-	-	-	-	-	-	-	-
LIMCCEJA_01774	3.25e-253	-	-	-	-	ko:K01992	-	ko00000,ko00002,ko02000	-
LIMCCEJA_01775	5.66e-159	-	1.5.1.40	-	S	ko:K06988	-	ko00000,ko01000	Rossmann-like domain
LIMCCEJA_01776	7.66e-251	XK27_00915	-	-	C	-	-	-	Luciferase-like monooxygenase
LIMCCEJA_01777	1.45e-126	yacP	-	-	S	ko:K06962	-	ko00000	YacP-like NYN domain
LIMCCEJA_01778	5.24e-185	trmH	2.1.1.185	-	J	ko:K03218	-	ko00000,ko01000,ko03009	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
LIMCCEJA_01779	2.79e-97	mrnC	-	-	J	ko:K11145	-	ko00000,ko01000,ko03009	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
LIMCCEJA_01780	0.0	cysS	6.1.1.16	-	J	ko:K01883	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-I aminoacyl-tRNA synthetase family
LIMCCEJA_01781	1.16e-208	-	-	-	K	-	-	-	sequence-specific DNA binding
LIMCCEJA_01782	4.53e-133	loxD	1.1.3.15	-	C	ko:K00104	ko00630,ko01100,ko01110,ko01120,ko01130,map00630,map01100,map01110,map01120,map01130	ko00000,ko00001,ko01000	FAD linked oxidases, C-terminal domain
LIMCCEJA_01783	5.9e-192	loxD	1.1.3.15	-	C	ko:K00104	ko00630,ko01100,ko01110,ko01120,ko01130,map00630,map01100,map01110,map01120,map01130	ko00000,ko00001,ko01000	FAD linked oxidases, C-terminal domain
LIMCCEJA_01784	1.05e-135	-	-	-	-	-	-	-	-
LIMCCEJA_01786	0.0	gltX	6.1.1.24	-	J	ko:K09698	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
LIMCCEJA_01787	4.13e-190	yhfC	-	-	S	-	-	-	Putative membrane peptidase family (DUF2324)
LIMCCEJA_01788	2.37e-227	-	-	-	S	-	-	-	Membrane
LIMCCEJA_01789	3.03e-83	-	-	-	K	-	-	-	helix_turn_helix gluconate operon transcriptional repressor
LIMCCEJA_01790	0.0	-	-	-	V	-	-	-	ABC transporter transmembrane region
LIMCCEJA_01791	7.55e-302	inlJ	-	-	M	-	-	-	MucBP domain
LIMCCEJA_01792	2.83e-151	-	-	-	K	-	-	-	sequence-specific DNA binding
LIMCCEJA_01793	1.06e-258	yacL	-	-	S	-	-	-	domain protein
LIMCCEJA_01794	0.0	radA	-	-	O	ko:K04485	-	ko00000,ko03400	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
LIMCCEJA_01795	4.49e-130	dut	3.6.1.23	-	F	ko:K01520	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	dUTPase
LIMCCEJA_01796	5.8e-66	yjdJ	-	-	S	ko:K06975	-	ko00000	GCN5-related N-acetyl-transferase
LIMCCEJA_01797	0.0	pepE	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	aminopeptidase
LIMCCEJA_01798	0.0	pepC	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	Peptidase C1-like family
LIMCCEJA_01799	4.64e-255	-	-	-	-	-	-	-	-
LIMCCEJA_01800	3.39e-275	-	-	-	S	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 family transporter protein
LIMCCEJA_01801	1.79e-212	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
LIMCCEJA_01802	0.0	kup	-	-	P	ko:K03549	-	ko00000,ko02000	Transport of potassium into the cell
LIMCCEJA_01803	0.0	ppdK	2.7.9.1	-	G	ko:K01006	ko00620,ko00710,ko00720,ko01100,ko01120,ko01200,map00620,map00710,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Belongs to the PEP-utilizing enzyme family
LIMCCEJA_01804	2.02e-120	ccpN	-	-	K	-	-	-	Domain in cystathionine beta-synthase and other proteins.
LIMCCEJA_01805	9.8e-158	gpmA1	5.4.2.11	-	G	ko:K01834	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
LIMCCEJA_01806	1.4e-259	ltrA	-	-	S	-	-	-	Bacterial low temperature requirement A protein (LtrA)
LIMCCEJA_01807	5.45e-61	-	-	-	-	-	-	-	-
LIMCCEJA_01808	3.6e-266	lctO	1.13.12.4	-	C	ko:K00467,ko:K10530	ko00620,map00620	ko00000,ko00001,ko01000	L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases
LIMCCEJA_01809	9.49e-26	-	-	-	S	-	-	-	CsbD-like
LIMCCEJA_01813	2.13e-44	-	-	-	-	-	-	-	-
LIMCCEJA_01814	7.81e-46	-	-	-	-	-	-	-	-
LIMCCEJA_01815	4.93e-286	-	-	-	EGP	-	-	-	Transmembrane secretion effector
LIMCCEJA_01816	4.09e-289	proA	1.2.1.41	-	E	ko:K00147	ko00330,ko00332,ko01100,ko01110,ko01130,ko01230,map00330,map00332,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
LIMCCEJA_01817	7.14e-192	proB	2.7.2.11	-	F	ko:K00931	ko00330,ko00332,ko01100,ko01130,ko01230,map00330,map00332,map01100,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
LIMCCEJA_01819	2.13e-124	-	-	-	-	-	-	-	-
LIMCCEJA_01820	2.19e-184	-	3.4.22.70	-	M	ko:K07284	-	ko00000,ko01000,ko01002,ko01011	Sortase family
LIMCCEJA_01821	0.0	-	-	-	M	-	-	-	Cna protein B-type domain
LIMCCEJA_01822	0.0	-	-	-	M	-	-	-	domain protein
LIMCCEJA_01823	0.0	-	-	-	M	-	-	-	domain protein
LIMCCEJA_01824	4.45e-133	-	-	-	-	-	-	-	-
LIMCCEJA_01825	2.68e-295	-	-	-	N	ko:K09384	-	ko00000	Uncharacterized conserved protein (DUF2075)
LIMCCEJA_01826	2.52e-265	-	-	-	S	-	-	-	Protein of unknown function (DUF2974)
LIMCCEJA_01827	2.91e-146	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
LIMCCEJA_01828	5.62e-75	padR	-	-	K	ko:K10947	-	ko00000,ko03000	Transcriptional regulator PadR-like family
LIMCCEJA_01829	4.99e-179	-	-	-	-	-	-	-	-
LIMCCEJA_01830	3.12e-176	-	-	-	-	-	-	-	-
LIMCCEJA_01831	3.12e-61	-	-	-	S	-	-	-	Enterocin A Immunity
LIMCCEJA_01832	1.12e-239	tas	-	-	C	-	-	-	Aldo/keto reductase family
LIMCCEJA_01833	0.0	-	-	-	S	-	-	-	Putative threonine/serine exporter
LIMCCEJA_01834	5.9e-78	-	-	-	-	-	-	-	-
LIMCCEJA_01835	6.29e-307	mesE	-	-	M	ko:K12293,ko:K20345	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko02000	Transport protein ComB
LIMCCEJA_01836	0.0	comA	-	-	V	ko:K06147,ko:K06148,ko:K12292,ko:K20344	ko02010,ko02020,ko02024,map02010,map02020,map02024	ko00000,ko00001,ko01000,ko02000	ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
LIMCCEJA_01838	6.26e-289	comD	2.7.13.3	-	T	ko:K07706,ko:K12294	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	ATPase histidine kinase DNA gyrase B HSP90 domain protein
LIMCCEJA_01839	3.25e-180	plnD	-	-	K	ko:K07707	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko02022	LytTr DNA-binding domain
LIMCCEJA_01842	1.16e-62	-	-	-	S	-	-	-	Enterocin A Immunity
LIMCCEJA_01843	1.93e-31	-	-	-	-	-	-	-	-
LIMCCEJA_01847	2.86e-177	-	-	-	S	-	-	-	CAAX protease self-immunity
LIMCCEJA_01848	6.02e-94	-	-	-	K	-	-	-	Transcriptional regulator
LIMCCEJA_01849	0.0	norB	-	-	EGP	ko:K08170	-	ko00000,ko00002,ko01504,ko02000	Major Facilitator Superfamily
LIMCCEJA_01850	6.33e-72	-	-	-	-	-	-	-	-
LIMCCEJA_01851	1.36e-72	-	-	-	S	-	-	-	Enterocin A Immunity
LIMCCEJA_01852	7.17e-232	ydhF	-	-	S	-	-	-	Aldo keto reductase
LIMCCEJA_01854	1.28e-168	-	-	-	S	-	-	-	Belongs to the short-chain dehydrogenases reductases (SDR) family
LIMCCEJA_01855	1.18e-276	yqiG	-	-	C	-	-	-	Oxidoreductase
LIMCCEJA_01856	1.98e-34	-	-	-	S	-	-	-	Short C-terminal domain
LIMCCEJA_01857	0.0	fumC	4.2.1.2	-	C	ko:K01679	ko00020,ko00620,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko04934,ko05200,ko05211,map00020,map00620,map00720,map01100,map01110,map01120,map01130,map01200,map04934,map05200,map05211	ko00000,ko00001,ko00002,ko01000	Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
LIMCCEJA_01858	5.67e-175	-	-	-	-	-	-	-	-
LIMCCEJA_01860	4.49e-26	-	-	-	-	-	-	-	-
LIMCCEJA_01861	0.0	mntH	-	-	P	ko:K03322	-	ko00000,ko02000	H( )-stimulated, divalent metal cation uptake system
LIMCCEJA_01862	0.0	atp2C1	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	P-type ATPase
LIMCCEJA_01863	4.42e-84	-	-	-	-	-	-	-	-
LIMCCEJA_01864	1.17e-305	-	-	-	EGP	-	-	-	Major Facilitator Superfamily
LIMCCEJA_01865	0.0	sufI	-	-	Q	-	-	-	Multicopper oxidase
LIMCCEJA_01866	2.5e-34	-	-	-	-	-	-	-	-
LIMCCEJA_01867	2.06e-145	-	-	-	P	-	-	-	Cation efflux family
LIMCCEJA_01868	1.68e-67	czrA	-	-	K	ko:K22043	-	ko00000,ko03000	Transcriptional regulator, ArsR family
LIMCCEJA_01869	3.81e-225	mntA	-	-	P	ko:K19975,ko:K19976	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the bacterial solute-binding protein 9 family
LIMCCEJA_01870	9.44e-186	mtsB	-	-	U	ko:K19972,ko:K19976	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC 3 transport family
LIMCCEJA_01871	4.8e-170	mntB	3.6.3.35	-	P	ko:K02074,ko:K09820,ko:K19973	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter
LIMCCEJA_01872	8.32e-56	rpsN	-	-	J	ko:K02954	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
LIMCCEJA_01873	1.17e-215	psaA	-	-	P	ko:K02077,ko:K11707	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the bacterial solute-binding protein 9 family
LIMCCEJA_01874	1.4e-152	-	-	-	GM	-	-	-	NmrA-like family
LIMCCEJA_01875	2.63e-113	-	-	-	-	-	-	-	-
LIMCCEJA_01876	5.12e-212	psaA	-	-	P	ko:K02077,ko:K11707	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the bacterial solute-binding protein 9 family
LIMCCEJA_01877	7.32e-28	-	-	-	-	-	-	-	-
LIMCCEJA_01880	9.85e-72	crcB	-	-	U	ko:K06199	-	ko00000,ko02000	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
LIMCCEJA_01881	9.16e-91	crcB1	-	-	U	ko:K06199	-	ko00000,ko02000	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
LIMCCEJA_01882	0.0	-	-	-	G	ko:K03292,ko:K16210	-	ko00000,ko02000	MFS/sugar transport protein
LIMCCEJA_01883	0.0	-	3.2.1.40	-	G	ko:K05989	-	ko00000,ko01000	Bacterial alpha-L-rhamnosidase concanavalin-like domain
LIMCCEJA_01884	6.75e-220	ssuA	-	-	P	ko:K02051,ko:K15553	ko00920,ko02010,map00920,map02010	ko00000,ko00001,ko00002,ko02000	NMT1-like family
LIMCCEJA_01885	0.0	-	6.2.1.48	-	IQ	ko:K02182	-	ko00000,ko01000	AMP-binding enzyme C-terminal domain
LIMCCEJA_01886	1.25e-301	-	-	-	I	-	-	-	Acyltransferase family
LIMCCEJA_01887	4.26e-157	ssuB	-	-	P	ko:K15555	ko00920,ko02010,map00920,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATPases associated with a variety of cellular activities
LIMCCEJA_01888	5.24e-191	ssuC	-	-	U	ko:K15554	ko00920,ko02010,map00920,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
LIMCCEJA_01889	7.77e-159	-	-	-	S	-	-	-	B3/4 domain
LIMCCEJA_01890	0.0	-	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter
LIMCCEJA_01891	0.0	-	-	-	V	-	-	-	ATPases associated with a variety of cellular activities
LIMCCEJA_01892	3.91e-268	-	-	-	EGP	-	-	-	Transmembrane secretion effector
LIMCCEJA_01893	8.98e-86	rpsI	-	-	J	ko:K02996	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uS9 family
LIMCCEJA_01894	4.23e-104	rplM	-	-	J	ko:K02871	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
LIMCCEJA_01895	4.31e-136	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
LIMCCEJA_01896	1.06e-237	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	FtsX-like permease family
LIMCCEJA_01897	9.39e-167	lolD	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
LIMCCEJA_01898	1.28e-45	-	-	-	-	-	-	-	-
LIMCCEJA_01899	6.34e-178	tipA	-	-	K	-	-	-	TipAS antibiotic-recognition domain
LIMCCEJA_01900	6.9e-179	truA	5.4.99.12	-	J	ko:K06173	-	ko00000,ko01000,ko03016	Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
LIMCCEJA_01901	5.43e-185	ecfT	-	-	U	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
LIMCCEJA_01902	4.3e-203	ecfA2	-	-	P	ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
LIMCCEJA_01903	3.44e-199	ecfA1	-	-	P	ko:K16786	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
LIMCCEJA_01904	5.68e-156	-	-	-	-	-	-	-	-
LIMCCEJA_01905	2.94e-80	rplQ	-	-	J	ko:K02879	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L17
LIMCCEJA_01906	1.8e-218	rpoA	2.7.7.6	-	K	ko:K03040	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
LIMCCEJA_01907	3.82e-82	rpsK	-	-	J	ko:K02948	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
LIMCCEJA_01908	2.66e-76	rpsM	-	-	J	ko:K02952	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
LIMCCEJA_01909	6.38e-20	rpmJ	-	-	J	ko:K02919	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL36 family
LIMCCEJA_01910	4.15e-46	infA	-	-	J	ko:K02518	-	ko00000,ko03012	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
LIMCCEJA_01911	3.86e-157	adk	2.7.4.3	-	F	ko:K00939	ko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
LIMCCEJA_01912	1.15e-297	secY	-	-	U	ko:K03076	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
LIMCCEJA_01913	1.42e-92	rplO	-	-	J	ko:K02876	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to the 23S rRNA
LIMCCEJA_01914	1.83e-33	rpmD	-	-	J	ko:K02907	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L30
LIMCCEJA_01915	8.15e-109	rpsE	-	-	J	ko:K02988	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
LIMCCEJA_01916	5.63e-77	rplR	-	-	J	ko:K02881	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
LIMCCEJA_01917	3.7e-123	rplF	-	-	J	ko:K02933	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
LIMCCEJA_01918	1.32e-88	rpsH	-	-	J	ko:K02994	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
LIMCCEJA_01919	1.23e-123	rplE	-	-	J	ko:K02931	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
LIMCCEJA_01920	1.67e-66	rplX	-	-	J	ko:K02895	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
LIMCCEJA_01921	1.73e-77	rplN	-	-	J	ko:K02874	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
LIMCCEJA_01922	1.7e-54	rpsQ	-	-	J	ko:K02961	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
LIMCCEJA_01923	4.53e-33	rpmC	-	-	J	ko:K02904	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uL29 family
LIMCCEJA_01924	1.96e-98	rplP	-	-	J	ko:K02878	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
LIMCCEJA_01925	2.92e-153	rpsC	-	-	J	ko:K02982	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
LIMCCEJA_01926	4.5e-73	rplV	-	-	J	ko:K02890	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
LIMCCEJA_01927	5.26e-63	rpsS	-	-	J	ko:K02965	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
LIMCCEJA_01928	2.07e-200	rplB	-	-	J	ko:K02886	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
LIMCCEJA_01929	5.07e-62	rplW	-	-	J	ko:K02892	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
LIMCCEJA_01930	1.7e-141	rplD	-	-	J	ko:K02926	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the polypeptide exit tunnel
LIMCCEJA_01931	1.4e-146	rplC	-	-	J	ko:K02906	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
LIMCCEJA_01932	1.09e-66	rpsJ	-	-	J	ko:K02946	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Involved in the binding of tRNA to the ribosomes
LIMCCEJA_01933	1.26e-90	psiE	-	-	S	ko:K13256	-	ko00000	Phosphate-starvation-inducible E
LIMCCEJA_01934	5.85e-139	ahpC	1.11.1.15	-	O	ko:K03386	ko04214,map04214	ko00000,ko00001,ko01000,ko04147	C-terminal domain of 1-Cys peroxiredoxin
LIMCCEJA_01935	7.4e-254	-	-	-	K	-	-	-	WYL domain
LIMCCEJA_01936	0.0	fusA	-	-	J	ko:K02355	-	ko00000,ko03012,ko03029	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
LIMCCEJA_01937	2.06e-108	rpsG	-	-	J	ko:K02992	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
LIMCCEJA_01938	3.18e-92	rpsL	-	-	J	ko:K02950	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
LIMCCEJA_01939	1.21e-110	-	3.4.23.43	-	-	ko:K02236	-	ko00000,ko00002,ko01000,ko02044	-
LIMCCEJA_01940	0.0	rpoC	2.7.7.6	-	K	ko:K03046	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
LIMCCEJA_01941	0.0	rpoB	2.7.7.6	-	K	ko:K03043	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
LIMCCEJA_01942	0.0	clpC	-	-	O	ko:K03696	ko01100,map01100	ko00000,ko03110	Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
LIMCCEJA_01943	7.17e-104	ctsR	-	-	K	ko:K03708	-	ko00000,ko03000	Belongs to the CtsR family
LIMCCEJA_01946	0.0	lysS	6.1.1.6	-	J	ko:K04567	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-II aminoacyl-tRNA synthetase family
LIMCCEJA_01947	1.12e-243	dus	-	-	J	ko:K05540	-	ko00000,ko01000,ko03016	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
LIMCCEJA_01948	5.97e-208	hslO	-	-	O	ko:K04083	-	ko00000,ko03110	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
LIMCCEJA_01949	0.0	ftsH	-	-	O	ko:K03798	-	ko00000,ko00002,ko01000,ko01002,ko03110	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
LIMCCEJA_01950	2.04e-125	hpt	2.4.2.8	-	F	ko:K00760	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the purine pyrimidine phosphoribosyltransferase family
LIMCCEJA_01951	5.45e-314	tilS	2.4.2.8, 6.3.4.19	-	J	ko:K04075,ko:K15780	ko00230,ko01100,ko01110,map00230,map01100,map01110	ko00000,ko00001,ko01000,ko03016	Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
LIMCCEJA_01952	6.08e-107	yabR	-	-	J	ko:K07571	-	ko00000	RNA binding
LIMCCEJA_01953	1.87e-84	divIC	-	-	D	ko:K05589,ko:K13052	-	ko00000,ko03036	cell cycle
LIMCCEJA_01954	2.33e-52	yabO	-	-	J	-	-	-	S4 domain protein
LIMCCEJA_01955	0.0	yabM	-	-	S	ko:K03328	-	ko00000	Polysaccharide biosynthesis protein
LIMCCEJA_01956	0.0	mfd	-	-	L	ko:K03723	ko03420,map03420	ko00000,ko00001,ko01000,ko03400	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
LIMCCEJA_01957	1.05e-131	pth	3.1.1.29	-	J	ko:K01056	-	ko00000,ko01000,ko03012	The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
LIMCCEJA_01958	1.02e-231	ldh	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	Belongs to the LDH MDH superfamily. LDH family
LIMCCEJA_01959	0.0	-	-	-	S	-	-	-	Putative peptidoglycan binding domain
LIMCCEJA_01960	6.37e-125	padR	-	-	K	-	-	-	Transcriptional regulator PadR-like family
LIMCCEJA_01961	0.0	-	-	-	S	ko:K01421	-	ko00000	ABC-2 family transporter protein
LIMCCEJA_01962	4.08e-149	-	-	-	S	-	-	-	Flavodoxin-like fold
LIMCCEJA_01963	1.9e-154	-	-	-	S	-	-	-	(CBS) domain
LIMCCEJA_01964	2.06e-168	yciB	-	-	M	-	-	-	ErfK YbiS YcfS YnhG
LIMCCEJA_01965	0.0	gltD	1.4.1.13, 1.4.1.14	-	E	ko:K00266	ko00250,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00250,map00910,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko01000	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
LIMCCEJA_01966	0.0	gltA	1.4.1.13, 1.4.1.14, 1.4.7.1	-	E	ko:K00265,ko:K00284	ko00250,ko00630,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00250,map00630,map00910,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko01000	GXGXG motif
LIMCCEJA_01967	5.65e-113	queT	-	-	S	-	-	-	QueT transporter
LIMCCEJA_01969	2.32e-82	ndoA	-	-	L	ko:K07171	-	ko00000,ko01000,ko02048	Toxic component of a toxin-antitoxin (TA) module
LIMCCEJA_01970	5.46e-51	-	-	-	-	-	-	-	-
LIMCCEJA_01971	1.5e-278	alr	5.1.1.1	-	E	ko:K01775	ko00473,ko01100,ko01502,map00473,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
LIMCCEJA_01972	2.25e-83	acpS	2.7.8.7	-	I	ko:K00997	ko00770,map00770	ko00000,ko00001,ko01000	Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
LIMCCEJA_01973	0.0	cshA	3.6.4.13	-	F	ko:K05592	ko03018,map03018	ko00000,ko00001,ko01000,ko03009,ko03019	DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
LIMCCEJA_01974	0.0	murF	6.3.2.10	-	M	ko:K01929	ko00300,ko00550,ko01100,ko01502,map00300,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
LIMCCEJA_01975	1.07e-190	-	-	-	-	-	-	-	-
LIMCCEJA_01976	2.34e-160	-	-	-	S	-	-	-	Tetratricopeptide repeat
LIMCCEJA_01977	1.9e-160	-	-	-	-	-	-	-	-
LIMCCEJA_01978	1.62e-96	-	-	-	-	-	-	-	-
LIMCCEJA_01979	3.24e-57	rpmE2	-	-	J	ko:K02909	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L31
LIMCCEJA_01980	3.31e-300	murA	2.5.1.7	-	M	ko:K00790	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
LIMCCEJA_01981	0.0	pyrG	6.3.4.2	-	F	ko:K01937	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
LIMCCEJA_01982	4.02e-282	yumB	1.6.99.3	-	C	ko:K03885	ko00190,map00190	ko00000,ko00001,ko01000	NADH dehydrogenase
LIMCCEJA_01985	1.28e-196	ybbB	-	-	S	-	-	-	Protein of unknown function (DUF1211)
LIMCCEJA_01986	2.69e-103	rpoE	-	-	K	ko:K03048	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko03021,ko03400	Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
LIMCCEJA_01987	1.21e-103	ywiB	-	-	S	-	-	-	Domain of unknown function (DUF1934)
LIMCCEJA_01989	2.07e-202	lipL	2.3.1.200, 2.3.1.204	-	H	ko:K16869,ko:K18821	-	ko00000,ko01000	biotin lipoate A B protein ligase
LIMCCEJA_01990	0.0	ywfO	-	-	S	ko:K06885	-	ko00000	HD domain protein
LIMCCEJA_01991	1.53e-107	mutT	3.6.1.55	-	L	ko:K03574	-	ko00000,ko01000,ko03400	NUDIX domain
LIMCCEJA_01992	7.8e-240	-	-	-	S	-	-	-	DUF218 domain
LIMCCEJA_01993	1.4e-78	mscL	-	-	M	ko:K03282	-	ko00000,ko02000	Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
LIMCCEJA_01994	1.66e-100	-	-	-	-	-	-	-	-
LIMCCEJA_01995	1.39e-70	nudA	-	-	S	-	-	-	ASCH
LIMCCEJA_01996	2.2e-225	prs	2.7.6.1	-	F	ko:K00948	ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
LIMCCEJA_01997	2.22e-297	glmU	2.3.1.157, 2.7.7.23	-	M	ko:K04042	ko00520,ko01100,ko01130,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
LIMCCEJA_01998	2.34e-284	ysaA	-	-	V	-	-	-	RDD family
LIMCCEJA_01999	1.01e-193	purR	-	-	F	ko:K09685	-	ko00000,ko03000	pur operon repressor
LIMCCEJA_02000	1.84e-154	ybbL	-	-	S	ko:K02068	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
LIMCCEJA_02001	2.5e-159	ybbM	-	-	S	ko:K02069	-	ko00000,ko00002,ko02000	Uncharacterised protein family (UPF0014)
LIMCCEJA_02002	6.67e-204	czcD	-	-	P	ko:K16264	-	ko00000,ko02000	cation diffusion facilitator family transporter
LIMCCEJA_02003	4.56e-211	ispE	2.7.1.148	-	F	ko:K00919,ko:K16924	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko02000	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
LIMCCEJA_02004	4.13e-51	veg	-	-	S	-	-	-	Biofilm formation stimulator VEG
LIMCCEJA_02005	1.06e-201	ksgA	2.1.1.182	-	J	ko:K02528	-	ko00000,ko01000,ko03009	Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
LIMCCEJA_02006	2.76e-129	rnmV	3.1.26.8	-	J	ko:K05985	-	ko00000,ko01000	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
LIMCCEJA_02007	6.41e-190	tatD	-	-	L	ko:K03424	-	ko00000,ko01000	hydrolase, TatD family
LIMCCEJA_02008	9.15e-105	manR	2.7.1.194, 2.7.1.200, 2.7.1.202	-	G	ko:K02538,ko:K02768,ko:K02769,ko:K02770,ko:K02773,ko:K02806,ko:K02821,ko:K03491	ko00051,ko00052,ko00053,ko01100,ko01120,ko02060,map00051,map00052,map00053,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000,ko03000	phosphoenolpyruvate-dependent sugar phosphotransferase system
LIMCCEJA_02009	7.82e-239	lacD	4.1.2.40	-	G	ko:K01635	ko00052,ko01100,ko02024,map00052,map01100,map02024	ko00000,ko00001,ko01000	Belongs to the aldolase LacD family
LIMCCEJA_02010	5.19e-222	yqhA	-	-	G	-	-	-	Aldose 1-epimerase
LIMCCEJA_02011	1.05e-162	-	-	-	T	ko:K07705	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	LytTr DNA-binding domain
LIMCCEJA_02012	1.22e-216	-	-	-	T	-	-	-	GHKL domain
LIMCCEJA_02013	0.0	-	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter
LIMCCEJA_02014	0.0	-	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter
LIMCCEJA_02015	9.64e-42	-	-	-	K	ko:K07729	-	ko00000,ko03000	Transcriptional
LIMCCEJA_02016	2.62e-89	-	-	-	-	-	-	-	-
LIMCCEJA_02017	0.0	metG	6.1.1.10	-	J	ko:K01874	ko00450,ko00970,map00450,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
LIMCCEJA_02019	1.15e-222	pepI	3.4.11.5	-	E	ko:K01259	ko00330,map00330	ko00000,ko00001,ko01000,ko01002	Releases the N-terminal proline from various substrates
LIMCCEJA_02021	2.52e-197	yunF	-	-	F	-	-	-	Protein of unknown function DUF72
LIMCCEJA_02022	1.09e-118	-	3.6.1.55	-	F	ko:K03574	-	ko00000,ko01000,ko03400	NUDIX domain
LIMCCEJA_02023	1.8e-217	-	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	Belongs to the LDH MDH superfamily
LIMCCEJA_02024	5.76e-140	yiiE	-	-	S	-	-	-	Protein of unknown function (DUF1211)
LIMCCEJA_02025	1.19e-166	cobB	-	-	K	ko:K12410	-	ko00000,ko01000	Sir2 family
LIMCCEJA_02026	7.77e-25	-	-	-	-	-	-	-	-
LIMCCEJA_02027	1.37e-220	-	-	-	-	-	-	-	-
LIMCCEJA_02028	6.73e-127	yxkA	-	-	S	ko:K06910	-	ko00000	Phosphatidylethanolamine-binding protein
LIMCCEJA_02029	9.28e-52	-	-	-	-	-	-	-	-
LIMCCEJA_02030	3.46e-219	ypuA	-	-	S	-	-	-	Protein of unknown function (DUF1002)
LIMCCEJA_02031	1e-220	ppx	3.6.1.11, 3.6.1.40	-	FP	ko:K01524	ko00230,map00230	ko00000,ko00001,ko01000	exopolyphosphatase
LIMCCEJA_02032	0.0	ppk	2.7.4.1	-	P	ko:K00937	ko00190,ko03018,map00190,map03018	ko00000,ko00001,ko01000,ko03019	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
LIMCCEJA_02033	0.0	ppx3	3.6.1.11, 3.6.1.40	-	FP	ko:K01524	ko00230,map00230	ko00000,ko00001,ko01000	exopolyphosphatase
LIMCCEJA_02034	1.01e-223	ydhF	-	-	S	-	-	-	Aldo keto reductase
LIMCCEJA_02035	5.3e-201	-	-	-	Q	-	-	-	Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
LIMCCEJA_02036	6.79e-120	ywnH	2.3.1.183	-	M	ko:K03823	ko00440,ko01130,map00440,map01130	ko00000,ko00001,ko01000	Acetyltransferase (GNAT) domain
LIMCCEJA_02037	5.55e-304	dinF	-	-	V	-	-	-	MatE
LIMCCEJA_02039	1.36e-142	-	-	-	S	ko:K06872	-	ko00000	TPM domain
LIMCCEJA_02040	5.07e-134	lemA	-	-	S	ko:K03744	-	ko00000	LemA family
LIMCCEJA_02041	6.02e-246	trpS	6.1.1.2	-	J	ko:K01867	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-I aminoacyl-tRNA synthetase family
LIMCCEJA_02042	1.19e-104	-	-	-	-	-	-	-	-
LIMCCEJA_02043	7.3e-32	-	-	-	-	-	-	-	-
LIMCCEJA_02045	6.36e-153	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
LIMCCEJA_02047	0.0	gshR	1.8.1.7	-	C	ko:K00383	ko00480,ko04918,map00480,map04918	ko00000,ko00001,ko01000	Glutathione reductase
LIMCCEJA_02048	1.09e-227	proV	-	-	E	ko:K05847	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter, ATP-binding protein
LIMCCEJA_02049	0.0	choS	-	-	EM	ko:K05845,ko:K05846	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Periplasmic glycine betaine choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)
LIMCCEJA_02051	0.0	-	-	-	L	-	-	-	DNA helicase
LIMCCEJA_02052	2.51e-195	rlrG	-	-	K	ko:K21900	-	ko00000,ko03000	Transcriptional regulator
LIMCCEJA_02053	4.47e-229	ydiA	-	-	P	ko:K11041	ko05150,map05150	ko00000,ko00001,ko02042	Voltage-dependent anion channel
LIMCCEJA_02054	8e-177	yadH	-	-	V	ko:K01992,ko:K09694	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC-2 type transporter
LIMCCEJA_02055	2.2e-173	cylA	-	-	V	ko:K01990,ko:K09695,ko:K11050	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
LIMCCEJA_02056	1.19e-167	ydfF	-	-	K	-	-	-	Transcriptional
LIMCCEJA_02057	3.81e-142	-	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
LIMCCEJA_02059	0.0	-	-	-	V	-	-	-	ABC transporter transmembrane region
LIMCCEJA_02060	1.82e-144	yagB	-	-	S	ko:K06950	-	ko00000	Metal dependent phosphohydrolases with conserved 'HD' motif.
LIMCCEJA_02061	4.69e-94	-	-	-	K	-	-	-	MarR family
LIMCCEJA_02062	0.0	uvrA3	-	-	L	ko:K03701	ko03420,map03420	ko00000,ko00001,ko03400	excinuclease ABC
LIMCCEJA_02063	1.12e-246	yghZ	-	-	C	ko:K19265	-	ko00000,ko01000	Aldo keto reductase family protein
LIMCCEJA_02064	9.32e-184	-	-	-	S	-	-	-	hydrolase
LIMCCEJA_02065	3.33e-78	-	-	-	-	-	-	-	-
LIMCCEJA_02066	1.71e-17	-	-	-	-	-	-	-	-
LIMCCEJA_02067	8.99e-157	-	-	-	S	-	-	-	Protein of unknown function (DUF1275)
LIMCCEJA_02068	3.55e-163	gpmB	-	-	G	ko:K15640	-	ko00000	Phosphoglycerate mutase family
LIMCCEJA_02069	2.42e-195	yitU	3.1.3.104	-	S	ko:K21064	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	hydrolase
LIMCCEJA_02070	1.38e-117	rnhA	3.1.26.4	-	L	ko:K03469	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
LIMCCEJA_02071	2.17e-213	-	-	-	K	-	-	-	LysR substrate binding domain
LIMCCEJA_02072	7.67e-294	-	-	-	EK	-	-	-	Aminotransferase, class I
LIMCCEJA_02074	1.34e-62	-	-	-	-	-	-	-	-
LIMCCEJA_02075	5.18e-75	-	-	-	-	-	-	-	-
LIMCCEJA_02076	3.1e-254	recA	-	-	L	ko:K03553	ko03440,map03440	ko00000,ko00001,ko00002,ko03400	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
LIMCCEJA_02077	4.38e-150	ydfK	-	-	S	ko:K07150	-	ko00000	Protein of unknown function (DUF554)
LIMCCEJA_02078	6.36e-117	-	-	-	-	-	-	-	-
LIMCCEJA_02082	0.0	fruC	2.7.1.202	-	GT	ko:K02769,ko:K02770	ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
LIMCCEJA_02083	6.04e-220	fruK-1	2.7.1.56	-	H	ko:K00882	ko00051,map00051	ko00000,ko00001,ko01000	pfkB family carbohydrate kinase
LIMCCEJA_02084	1e-168	rpl	-	-	K	-	-	-	Helix-turn-helix domain, rpiR family
LIMCCEJA_02085	0.0	glpK	2.7.1.30	-	F	ko:K00864	ko00561,ko01100,ko03320,ko04626,map00561,map01100,map03320,map04626	ko00000,ko00001,ko01000,ko04147	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
LIMCCEJA_02086	2.81e-177	-	-	-	K	-	-	-	UTRA domain
LIMCCEJA_02087	0.0	-	3.2.1.51	GH29	G	ko:K01206	ko00511,map00511	ko00000,ko00001,ko01000,ko04147	Alpha-L-fucosidase
LIMCCEJA_02088	1.58e-208	-	2.7.1.191	-	G	ko:K02793,ko:K02794	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system sorbose subfamily IIB component
LIMCCEJA_02089	2.19e-181	-	-	-	G	ko:K02795	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	PTS system sorbose-specific iic component
LIMCCEJA_02090	6.12e-191	-	-	-	G	ko:K02796	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	PTS system mannose/fructose/sorbose family IID component
LIMCCEJA_02091	0.0	yclC	4.1.1.61, 4.1.1.98	-	H	ko:K01612,ko:K03182,ko:K16874	ko00130,ko00365,ko00627,ko01100,ko01110,ko01120,ko01220,map00130,map00365,map00627,map01100,map01110,map01120,map01220	ko00000,ko00001,ko00002,ko01000	3-octaprenyl-4-hydroxybenzoate carboxy-lyase
LIMCCEJA_02092	1.32e-132	ubiX	2.5.1.129	-	H	ko:K03186	ko00130,ko00627,ko00940,ko01100,ko01110,ko01120,ko01220,map00130,map00627,map00940,map01100,map01110,map01120,map01220	ko00000,ko00001,ko00002,ko01000	Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN
LIMCCEJA_02093	4.17e-314	-	-	-	P	-	-	-	Sodium:sulfate symporter transmembrane region
LIMCCEJA_02094	2.07e-206	-	-	-	K	-	-	-	LysR substrate binding domain
LIMCCEJA_02095	3.13e-99	-	-	-	-	-	-	-	-
LIMCCEJA_02096	2.37e-95	-	-	-	K	-	-	-	Transcriptional regulator
LIMCCEJA_02097	7.23e-316	-	-	-	U	ko:K18926	-	ko00000,ko00002,ko02000	Major Facilitator Superfamily
LIMCCEJA_02098	1.77e-130	-	-	-	-	-	-	-	-
LIMCCEJA_02099	2.53e-287	dgoD	4.2.1.6, 4.2.1.8	-	M	ko:K01684,ko:K08323	ko00040,ko00052,ko01100,ko01120,map00040,map00052,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Mandelate racemase muconate lactonizing enzyme
LIMCCEJA_02100	2.82e-314	-	-	-	G	ko:K02775	ko00052,ko01100,ko02060,map00052,map01100,map02060	ko00000,ko00001,ko00002,ko02000	PTS system sugar-specific permease component
LIMCCEJA_02101	1.18e-60	sgcB	2.7.1.200	-	G	ko:K02774	ko00052,ko01100,ko02060,map00052,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
LIMCCEJA_02102	5.47e-103	-	2.7.1.200	-	GT	ko:K02773	ko00052,ko01100,ko02060,map00052,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
LIMCCEJA_02103	2.83e-145	-	4.1.2.14, 4.1.3.42	-	G	ko:K01625	ko00030,ko00630,ko01100,ko01120,ko01200,map00030,map00630,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	KDPG and KHG aldolase
LIMCCEJA_02104	0.0	-	-	-	G	-	-	-	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
LIMCCEJA_02106	1.84e-65	celC	2.7.1.196, 2.7.1.205	-	G	ko:K02759	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIA subunit
LIMCCEJA_02107	3.22e-65	ptcB	2.7.1.196, 2.7.1.205	-	G	ko:K02760	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
LIMCCEJA_02108	0.0	bgl	3.2.1.21, 3.2.1.85, 3.2.1.86	GT1	G	ko:K01220,ko:K01223,ko:K05350	ko00010,ko00052,ko00460,ko00500,ko00940,ko01100,ko01110,map00010,map00052,map00460,map00500,map00940,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
LIMCCEJA_02109	5.29e-206	ypbG	2.7.1.2	-	GK	ko:K00845	ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	ROK family
LIMCCEJA_02110	0.0	-	-	-	S	ko:K09704	-	ko00000	Metal-independent alpha-mannosidase (GH125)
LIMCCEJA_02111	0.0	mngB	3.2.1.170	GH38	G	ko:K15524	-	ko00000,ko01000	hydrolase, family 38
LIMCCEJA_02112	7.79e-189	mngB	3.2.1.170	GH38	G	ko:K15524	-	ko00000,ko01000	Glycosyl hydrolases family 38 N-terminal domain
LIMCCEJA_02113	0.0	-	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
LIMCCEJA_02114	5.68e-175	-	-	-	K	ko:K03492	-	ko00000,ko03000	UbiC transcription regulator-associated domain protein
LIMCCEJA_02115	5e-174	yulB	-	-	K	ko:K22103	-	ko00000,ko03000	DeoR C terminal sensor domain
LIMCCEJA_02116	1.1e-186	-	4.1.2.17	-	G	ko:K01628	ko00051,ko01120,map00051,map01120	ko00000,ko00001,ko01000	Class II Aldolase and Adducin N-terminal domain
LIMCCEJA_02117	2.28e-102	fucU	5.1.3.29	-	G	ko:K02431	-	ko00000,ko01000	RbsD / FucU transport protein family
LIMCCEJA_02118	5.31e-301	xylT	-	-	EGP	ko:K06609	-	ko00000,ko02000	Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family
LIMCCEJA_02119	0.0	rhaB	2.7.1.5	-	G	ko:K00848	ko00040,ko00051,ko01120,map00040,map00051,map01120	ko00000,ko00001,ko01000	FGGY family of carbohydrate kinases, N-terminal domain
LIMCCEJA_02120	0.0	fucI	5.3.1.25, 5.3.1.3	-	G	ko:K01818	ko00051,ko01120,map00051,map01120	ko00000,ko00001,ko01000	Converts the aldose L-fucose into the corresponding ketose L-fuculose
LIMCCEJA_02121	6.49e-213	rhaD	4.1.2.19	-	H	ko:K01629	ko00040,ko00051,ko01120,map00040,map00051,map01120	ko00000,ko00001,ko01000	Catalyzes the reversible cleavage of L-rhamnulose-1- phosphate to dihydroxyacetone phosphate (DHAP) and L-lactaldehyde
LIMCCEJA_02122	0.0	rhaA	2.7.1.5, 5.3.1.14	-	G	ko:K00848,ko:K01813	ko00040,ko00051,ko01120,map00040,map00051,map01120	ko00000,ko00001,ko01000	L-rhamnose isomerase (RhaA)
LIMCCEJA_02123	1.04e-74	rhaM	5.1.3.32	-	G	ko:K03534	-	ko00000,ko01000	Involved in the anomeric conversion of L-rhamnose
LIMCCEJA_02124	0.0	rhaB	2.7.1.5	-	F	ko:K00848	ko00040,ko00051,ko01120,map00040,map00051,map01120	ko00000,ko00001,ko01000	Involved in the catabolism of L-rhamnose (6-deoxy-L- mannose). Catalyzes the transfer of the gamma-phosphate group from ATP to the 1-hydroxyl group of L-rhamnulose to yield L-rhamnulose 1-phosphate
LIMCCEJA_02125	0.0	iolF	-	-	P	ko:K06610	-	ko00000,ko02000	Sugar (and other) transporter
LIMCCEJA_02126	8.93e-249	-	-	-	K	-	-	-	helix_turn_helix, arabinose operon control protein
LIMCCEJA_02127	5.2e-276	adhC	1.1.1.90	-	C	ko:K00055	ko00350,ko00360,ko00622,ko00623,ko01100,ko01120,ko01220,map00350,map00360,map00622,map00623,map01100,map01120,map01220	ko00000,ko00001,ko00002,ko01000	Zn-dependent alcohol dehydrogenases, class III
LIMCCEJA_02128	4.88e-88	-	-	-	S	-	-	-	Protein of unknown function (DUF1093)
LIMCCEJA_02129	6.29e-162	-	-	-	-	-	-	-	-
LIMCCEJA_02130	0.0	-	3.2.1.10, 3.2.1.20	GH13,GH31	G	ko:K01182,ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Alpha amylase, catalytic domain protein
LIMCCEJA_02131	5.89e-162	rpiA	5.3.1.6	-	G	ko:K01807	ko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
LIMCCEJA_02132	4.19e-65	-	-	-	-	-	-	-	-
LIMCCEJA_02133	0.0	-	3.2.1.122	GH4	G	ko:K01232	ko00500,map00500	ko00000,ko00001,ko01000	Family 4 glycosyl hydrolase C-terminal domain
LIMCCEJA_02134	0.0	-	2.7.1.199, 2.7.1.208	-	G	ko:K02790,ko:K02791	ko00010,ko00500,ko00520,ko02060,map00010,map00500,map00520,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system, EIIB
LIMCCEJA_02136	1.5e-168	-	-	-	K	-	-	-	Helix-turn-helix domain, rpiR family
LIMCCEJA_02137	3e-108	ptbA	2.7.1.208	-	G	ko:K02755,ko:K02777,ko:K20107,ko:K20108	ko00010,ko00500,ko00520,ko02026,ko02060,ko05111,map00010,map00500,map00520,map02026,map02060,map05111	ko00000,ko00001,ko00002,ko01000,ko02000	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
LIMCCEJA_02139	4.82e-178	-	4.1.2.14	-	S	ko:K17463	ko00030,ko01100,ko01120,map00030,map01100,map01120	ko00000,ko00001,ko00002,ko01000	KDGP aldolase
LIMCCEJA_02140	1.3e-261	selA	2.9.1.1	-	H	ko:K01042	ko00450,ko00970,map00450,map00970	ko00000,ko00001,ko01000	L-seryl-tRNA selenium transferase
LIMCCEJA_02141	1.28e-276	dho	3.5.2.3	-	S	ko:K01465	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Amidohydrolase family
LIMCCEJA_02142	3.36e-153	-	-	-	S	-	-	-	Domain of unknown function (DUF4310)
LIMCCEJA_02143	2.89e-177	-	-	-	S	-	-	-	Domain of unknown function (DUF4311)
LIMCCEJA_02144	1.66e-75	-	-	-	S	-	-	-	Domain of unknown function (DUF4312)
LIMCCEJA_02145	1.23e-80	-	-	-	S	-	-	-	Glycine-rich SFCGS
LIMCCEJA_02146	1.39e-72	-	-	-	S	-	-	-	PRD domain
LIMCCEJA_02147	0.0	-	-	-	K	-	-	-	Mga helix-turn-helix domain
LIMCCEJA_02148	2.06e-159	-	-	-	H	-	-	-	Pfam:Transaldolase
LIMCCEJA_02149	8.61e-85	-	2.7.1.198	-	G	ko:K02781	ko00051,ko02060,map00051,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system glucitol/sorbitol-specific IIA component
LIMCCEJA_02150	3.4e-255	srlE	2.7.1.198	-	G	ko:K02782,ko:K02783	ko00051,ko02060,map00051,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Sorbitol phosphotransferase enzyme II N-terminus
LIMCCEJA_02151	1.43e-131	srlA	-	-	G	ko:K02783	ko00051,ko02060,map00051,map02060	ko00000,ko00001,ko00002,ko02000	PTS system enzyme II sorbitol-specific factor
LIMCCEJA_02152	1.52e-114	srlM1	-	-	K	-	-	-	Glucitol operon activator protein (GutM)
LIMCCEJA_02153	0.0	srlM	-	-	GKT	ko:K03491	-	ko00000,ko03000	Mga helix-turn-helix domain
LIMCCEJA_02154	2.05e-185	srlD	1.1.1.140	-	IQ	ko:K00068	ko00051,map00051	ko00000,ko00001,ko01000	NAD dependent epimerase/dehydratase family
LIMCCEJA_02155	1.83e-176	araD	5.1.3.4	-	G	ko:K03077	ko00040,ko00053,ko01100,ko01120,map00040,map00053,map01100,map01120	ko00000,ko00001,ko00002,ko01000	links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source
LIMCCEJA_02156	1.76e-194	-	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
LIMCCEJA_02157	3.1e-215	sga	5.1.3.22	-	G	ko:K03079	ko00040,ko00053,ko01100,ko01120,map00040,map00053,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Xylose isomerase-like TIM barrel
LIMCCEJA_02158	3.66e-177	-	-	-	K	-	-	-	DeoR C terminal sensor domain
LIMCCEJA_02159	3.7e-148	ulaD	4.1.1.85, 4.1.2.43	-	G	ko:K03078,ko:K08093	ko00030,ko00040,ko00053,ko00680,ko01100,ko01120,ko01200,ko01230,map00030,map00040,map00053,map00680,map01100,map01120,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Orotidine 5'-phosphate decarboxylase / HUMPS family
LIMCCEJA_02160	6.78e-61	sgaB	2.7.1.194	-	G	ko:K02822	ko00053,ko01100,ko01120,ko02060,map00053,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
LIMCCEJA_02161	0.0	sgaT	-	-	S	ko:K03475	ko00053,ko01100,ko01120,ko02060,map00053,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko02000	PTS system sugar-specific permease component
LIMCCEJA_02162	4.19e-106	-	2.7.1.194	-	G	ko:K02821	ko00053,ko01100,ko01120,ko02060,map00053,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
LIMCCEJA_02163	3.1e-273	ulaG	-	-	S	ko:K03476	ko00053,ko01100,ko01120,map00053,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Beta-lactamase superfamily domain
LIMCCEJA_02164	0.0	prtP	3.4.21.96	-	O	ko:K01361	-	ko00000,ko01000,ko01002,ko03110	Belongs to the peptidase S8 family
LIMCCEJA_02165	9.75e-59	-	-	-	-	-	-	-	-
LIMCCEJA_02166	3.17e-205	-	-	-	GK	-	-	-	ROK family
LIMCCEJA_02167	1.57e-232	asnA2	3.5.1.1	-	E	ko:K01424	ko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110	ko00000,ko00001,ko01000	Asparaginase
LIMCCEJA_02168	0.0	-	-	-	E	-	-	-	Peptidase family M20/M25/M40
LIMCCEJA_02169	1.5e-169	-	-	-	K	ko:K03710	-	ko00000,ko03000	UTRA
LIMCCEJA_02170	4.11e-273	-	-	-	EGP	-	-	-	Transporter, major facilitator family protein
LIMCCEJA_02171	2.07e-265	-	3.2.1.51	GH29	G	ko:K01206	ko00511,map00511	ko00000,ko00001,ko01000,ko04147	Alpha-L-fucosidase
LIMCCEJA_02172	3.55e-127	-	-	-	S	-	-	-	Domain of unknown function (DUF4428)
LIMCCEJA_02173	0.0	-	2.7.1.17, 2.7.1.53	-	G	ko:K00854,ko:K00880	ko00040,ko00053,ko01100,map00040,map00053,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the FGGY kinase family
LIMCCEJA_02174	5.92e-262	-	1.1.1.14	-	C	ko:K00008	ko00040,ko00051,ko01100,map00040,map00051,map01100	ko00000,ko00001,ko00002,ko01000	Zinc-binding dehydrogenase
LIMCCEJA_02175	1.71e-199	-	-	-	G	ko:K02796	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	PTS system mannose/fructose/sorbose family IID component
LIMCCEJA_02176	4.28e-177	-	-	-	G	ko:K02795	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	PTS system sorbose-specific iic component
LIMCCEJA_02177	1.97e-107	-	2.7.1.191	-	G	ko:K02794	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system sorbose subfamily IIB component
LIMCCEJA_02178	1.25e-93	ahaA	2.7.1.191	-	G	ko:K02793	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system fructose IIA component
LIMCCEJA_02179	1.17e-64	-	-	-	K	ko:K03491	-	ko00000,ko03000	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
LIMCCEJA_02180	3.09e-208	-	-	-	G	-	-	-	Fructose-bisphosphate aldolase class-II
LIMCCEJA_02181	0.0	-	-	-	G	-	-	-	FGGY family of carbohydrate kinases, C-terminal domain
LIMCCEJA_02182	0.0	-	-	-	G	ko:K02775	ko00052,ko01100,ko02060,map00052,map01100,map02060	ko00000,ko00001,ko00002,ko02000	PTS system sugar-specific permease component
LIMCCEJA_02183	5.95e-65	-	2.7.1.200	-	G	ko:K02774	ko00052,ko01100,ko02060,map00052,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
LIMCCEJA_02184	6.52e-103	-	2.7.1.200	-	GT	ko:K02773	ko00052,ko01100,ko02060,map00052,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
LIMCCEJA_02185	5.31e-206	-	-	-	G	-	-	-	Fructose-bisphosphate aldolase class-II
LIMCCEJA_02186	5.64e-173	farR	-	-	K	-	-	-	Helix-turn-helix domain
LIMCCEJA_02187	6.5e-119	-	-	-	K	ko:K03828	-	ko00000,ko01000	Acetyltransferase (GNAT) domain
LIMCCEJA_02188	1.3e-146	yjhB	3.6.1.13	-	F	ko:K01515	ko00230,map00230	ko00000,ko00001,ko01000	NUDIX domain
LIMCCEJA_02190	1.12e-128	-	-	-	K	-	-	-	Helix-turn-helix domain
LIMCCEJA_02191	0.0	-	-	-	G	-	-	-	Belongs to the glycosyl hydrolase 31 family
LIMCCEJA_02192	1.24e-171	-	-	-	F	-	-	-	NUDIX domain
LIMCCEJA_02193	9.35e-140	pncA	-	-	Q	-	-	-	Isochorismatase family
LIMCCEJA_02194	0.0	nadC2	6.3.4.21	-	F	ko:K00763	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
LIMCCEJA_02195	3.71e-171	glpQ1	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	glycerophosphoryl diester phosphodiesterase
LIMCCEJA_02196	5.05e-93	arsC	1.20.4.1	-	T	ko:K03741	-	ko00000,ko01000	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
LIMCCEJA_02197	0.0	ugpB	-	-	G	ko:K05813	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding protein
LIMCCEJA_02198	6.89e-191	ugpE	-	-	G	ko:K05815	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
LIMCCEJA_02199	9.13e-211	-	-	-	P	ko:K05814	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC-type sugar transport systems, permease components
LIMCCEJA_02200	3.22e-269	ugpC	3.6.3.20	-	E	ko:K05816,ko:K10112	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Belongs to the ABC transporter superfamily
LIMCCEJA_02201	9.63e-289	-	-	-	EGP	-	-	-	Transmembrane secretion effector
LIMCCEJA_02202	9.1e-191	-	3.5.2.6	-	V	ko:K17836	ko00311,ko01130,ko01501,map00311,map01130,map01501	ko00000,ko00001,ko00002,ko01000,ko01504	Beta-lactamase enzyme family
LIMCCEJA_02203	7.7e-255	-	-	-	V	-	-	-	Beta-lactamase
LIMCCEJA_02204	2.38e-191	murQ	4.2.1.126	-	G	ko:K07106	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
LIMCCEJA_02205	2.83e-212	-	-	-	K	-	-	-	Helix-turn-helix domain, rpiR family
LIMCCEJA_02206	6.79e-105	-	2.7.1.191	-	G	ko:K02794	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system sorbose subfamily IIB component
LIMCCEJA_02207	8.69e-193	-	-	-	G	ko:K02796	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	PTS system mannose/fructose/sorbose family IID component
LIMCCEJA_02208	2.1e-183	XK27_08455	-	-	G	ko:K02795	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	PTS system sorbose-specific iic component
LIMCCEJA_02210	3.7e-260	-	-	-	S	-	-	-	endonuclease exonuclease phosphatase family protein
LIMCCEJA_02211	3.94e-221	nrnA	3.1.13.3, 3.1.3.7	-	S	ko:K06881	ko00920,ko01100,ko01120,map00920,map01100,map01120	ko00000,ko00001,ko01000,ko03400	DHHA1 domain protein
LIMCCEJA_02212	1.11e-203	-	1.1.1.346	-	S	ko:K06221	-	ko00000,ko01000	reductase
LIMCCEJA_02213	5.2e-98	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
LIMCCEJA_02214	3.57e-186	-	-	-	Q	-	-	-	Methyltransferase
LIMCCEJA_02215	1.43e-222	draG	-	-	O	-	-	-	ADP-ribosylglycohydrolase
LIMCCEJA_02216	1.25e-67	sugE	-	-	U	ko:K11741	-	ko00000,ko02000	Multidrug resistance protein
LIMCCEJA_02217	1.24e-07	-	-	-	S	-	-	-	SpoVT / AbrB like domain
LIMCCEJA_02219	2.38e-80	-	-	-	-	-	-	-	-
LIMCCEJA_02220	1.78e-49	-	-	-	-	-	-	-	-
LIMCCEJA_02221	2.51e-143	-	-	-	S	-	-	-	alpha beta
LIMCCEJA_02222	1.32e-117	yfbM	-	-	K	-	-	-	FR47-like protein
LIMCCEJA_02223	1.05e-174	ptp1	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Tyrosine phosphatase family
LIMCCEJA_02224	4.82e-113	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
LIMCCEJA_02225	5.06e-160	-	-	-	-	-	-	-	-
LIMCCEJA_02226	2.5e-91	-	-	-	S	-	-	-	ASCH
LIMCCEJA_02227	1.74e-106	rlmH	2.1.1.177	-	J	ko:K00783	-	ko00000,ko01000,ko03009	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
LIMCCEJA_02228	4.64e-255	ysdE	-	-	P	-	-	-	Citrate transporter
LIMCCEJA_02229	1.58e-141	-	-	-	-	-	-	-	-
LIMCCEJA_02230	0.0	dapE	3.5.1.18	-	E	ko:K01439	ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Peptidase dimerisation domain
LIMCCEJA_02231	0.0	oppA	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
LIMCCEJA_02233	1.34e-219	-	-	-	-	-	-	-	-
LIMCCEJA_02234	0.0	cadA	-	-	P	-	-	-	P-type ATPase
LIMCCEJA_02235	1.22e-100	hsp1	-	-	O	ko:K13993	ko04141,map04141	ko00000,ko00001,ko03110	Hsp20/alpha crystallin family
LIMCCEJA_02236	2.35e-92	-	-	-	S	-	-	-	Iron-sulphur cluster biosynthesis
LIMCCEJA_02237	1.99e-284	htrA	3.4.21.107	-	O	ko:K04771	ko01503,ko02020,map01503,map02020	ko00000,ko00001,ko00002,ko01000,ko01002,ko03110	serine protease
LIMCCEJA_02238	1.15e-15	-	-	-	-	-	-	-	-
LIMCCEJA_02239	2.72e-196	vicX	3.1.26.11	-	S	ko:K00784	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	domain protein
LIMCCEJA_02240	4.46e-184	yycI	-	-	S	-	-	-	YycH protein
LIMCCEJA_02241	0.0	yycH	-	-	S	-	-	-	YycH protein
LIMCCEJA_02242	0.0	vicK	2.7.13.3	-	T	ko:K07652	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
LIMCCEJA_02243	5.24e-169	yycF	-	-	K	ko:K07668	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	response regulator
LIMCCEJA_02244	6.64e-161	-	1.11.1.10	-	S	ko:K00433	-	ko00000,ko01000	Alpha/beta hydrolase family
LIMCCEJA_02245	0.0	arpJ	-	-	P	ko:K02029,ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter permease
LIMCCEJA_02246	1.19e-300	argG	6.3.4.5	-	E	ko:K01940	ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,ko05418,map00220,map00250,map01100,map01110,map01130,map01230,map05418	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the argininosuccinate synthase family. Type 1 subfamily
LIMCCEJA_02247	0.0	argH	4.3.2.1	-	E	ko:K01755	ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,map00220,map00250,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	argininosuccinate lyase
LIMCCEJA_02248	3.37e-273	ybhE	-	-	S	ko:K09963	-	ko00000	Bacterial protein of unknown function (DUF871)
LIMCCEJA_02249	3.7e-96	-	-	-	S	-	-	-	Domain of unknown function (DUF3284)
LIMCCEJA_02250	0.0	chbC	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
LIMCCEJA_02251	8.04e-168	-	-	-	K	-	-	-	UbiC transcription regulator-associated domain protein
LIMCCEJA_02252	9.41e-69	pts20B	2.7.1.196, 2.7.1.205	-	G	ko:K02760	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
LIMCCEJA_02253	2.91e-72	celC	2.7.1.196, 2.7.1.205	-	G	ko:K02759	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose Cellobiose specific IIA subunit
LIMCCEJA_02254	9.03e-141	yokL3	-	-	J	-	-	-	Acetyltransferase (GNAT) domain
LIMCCEJA_02255	1.33e-108	-	-	-	F	-	-	-	NUDIX domain
LIMCCEJA_02256	1.7e-117	-	-	-	S	-	-	-	AAA domain
LIMCCEJA_02257	2.24e-146	ycaC	-	-	Q	-	-	-	Isochorismatase family
LIMCCEJA_02258	0.0	-	-	-	EGP	-	-	-	Major Facilitator Superfamily
LIMCCEJA_02259	7.39e-274	yycB	-	-	P	ko:K03449	-	ko00000,ko02000	Transporter, major facilitator family protein
LIMCCEJA_02260	6.3e-222	iolS	-	-	C	ko:K06607	-	ko00000,ko01000	Aldo keto reductase
LIMCCEJA_02261	1.54e-84	manO	-	-	S	-	-	-	Domain of unknown function (DUF956)
LIMCCEJA_02262	7.33e-218	manN	-	-	G	ko:K02796	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	system, mannose fructose sorbose family IID component
LIMCCEJA_02263	6.18e-173	manM	-	-	G	ko:K02746,ko:K02795	ko00051,ko00052,ko00520,ko01100,ko02060,map00051,map00052,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	PTS system
LIMCCEJA_02264	7.73e-231	manL	2.7.1.191, 2.7.1.202	-	G	ko:K02769,ko:K02793,ko:K02794	ko00051,ko00520,ko01100,ko01120,ko02060,map00051,map00520,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system sorbose subfamily IIB component
LIMCCEJA_02265	8.76e-282	-	-	-	EGP	-	-	-	Major facilitator Superfamily
LIMCCEJA_02266	5.34e-245	-	-	-	K	ko:K20373	ko02024,map02024	ko00000,ko00001,ko03000	Helix-turn-helix XRE-family like proteins
LIMCCEJA_02267	4.13e-193	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
LIMCCEJA_02268	3.19e-206	-	-	-	K	-	-	-	sequence-specific DNA binding
LIMCCEJA_02273	0.0	ybfG	-	-	M	-	-	-	peptidoglycan-binding domain-containing protein
LIMCCEJA_02274	1.92e-89	ybfG	-	-	M	-	-	-	peptidoglycan-binding domain-containing protein
LIMCCEJA_02276	0.0	XK27_05795	-	-	P	ko:K17073,ko:K17074	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
LIMCCEJA_02277	1.89e-172	glnQ	-	-	E	ko:K17076	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
LIMCCEJA_02278	6.51e-54	-	-	-	-	-	-	-	-
LIMCCEJA_02279	4.23e-306	-	-	-	G	ko:K02027	-	ko00000,ko00002,ko02000	Bacterial extracellular solute-binding protein
LIMCCEJA_02280	1.39e-169	-	-	-	S	-	-	-	Protein of unknown function (DUF975)
LIMCCEJA_02281	7.92e-76	-	-	-	S	-	-	-	Iron-sulphur cluster biosynthesis
LIMCCEJA_02282	9.87e-70	-	-	-	-	-	-	-	-
LIMCCEJA_02283	4.66e-105	ydbS	-	-	S	ko:K09167	-	ko00000	Bacterial PH domain
LIMCCEJA_02284	0.0	ydbT	-	-	S	ko:K08981	-	ko00000	Bacterial PH domain
LIMCCEJA_02285	9.44e-187	-	-	-	S	-	-	-	AAA ATPase domain
LIMCCEJA_02286	3.78e-217	-	-	-	G	-	-	-	Phosphotransferase enzyme family
LIMCCEJA_02287	7.69e-171	glnQ	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
LIMCCEJA_02288	0.0	glnP	-	-	P	ko:K02029,ko:K02030,ko:K10036	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
LIMCCEJA_02289	0.0	glnP	-	-	P	ko:K02029,ko:K02030,ko:K10036	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
LIMCCEJA_02290	2.39e-131	ydaF	-	-	J	ko:K03817	-	ko00000,ko01000,ko03009	Acetyltransferase (GNAT) domain
LIMCCEJA_02291	1.06e-135	-	-	-	S	ko:K06384	-	ko00000	Stage II sporulation protein M
LIMCCEJA_02292	2.98e-217	moxR	-	-	S	ko:K03924	-	ko00000,ko01000	ATPase family associated with various cellular activities (AAA)
LIMCCEJA_02293	1.26e-210	-	-	-	S	-	-	-	Protein of unknown function DUF58
LIMCCEJA_02294	0.0	yebA	-	-	E	-	-	-	Transglutaminase/protease-like homologues
LIMCCEJA_02295	3e-273	-	-	-	M	-	-	-	Glycosyl transferases group 1
LIMCCEJA_02296	0.0	aspA	4.3.1.1	-	E	ko:K01744	ko00250,ko01100,map00250,map01100	ko00000,ko00001,ko01000	Fumarase C C-terminus
LIMCCEJA_02297	3.12e-146	-	-	-	S	-	-	-	Bacteriocin-protection, YdeI or OmpD-Associated
LIMCCEJA_02298	6.38e-88	yjdF3	-	-	S	-	-	-	Protein of unknown function (DUF2992)
LIMCCEJA_02301	3.26e-162	mae	1.1.1.38	-	C	ko:K00027	ko00620,ko01200,ko02020,map00620,map01200,map02020	ko00000,ko00001,ko01000	Malic enzyme, NAD binding domain
LIMCCEJA_02302	9.18e-86	mae	1.1.1.38	-	C	ko:K00027	ko00620,ko01200,ko02020,map00620,map01200,map02020	ko00000,ko00001,ko01000	Malic enzyme, NAD binding domain
LIMCCEJA_02303	5.39e-292	malP	-	-	C	ko:K11616	ko02020,map02020	ko00000,ko00001	2-hydroxycarboxylate transporter family
LIMCCEJA_02304	0.0	dpiB	2.7.13.3	-	T	ko:K02476,ko:K11614	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Single cache domain 3
LIMCCEJA_02305	5.2e-156	malR	-	-	KT	ko:K02475,ko:K11615	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	cheY-homologous receiver domain
LIMCCEJA_02306	2.8e-130	-	-	-	-	-	-	-	-
LIMCCEJA_02308	3.03e-196	-	-	-	I	-	-	-	NAD binding domain of 6-phosphogluconate dehydrogenase
LIMCCEJA_02309	3.93e-90	-	-	-	-	-	-	-	-
LIMCCEJA_02310	1.11e-169	-	-	-	F	-	-	-	Glutamine amidotransferase class-I
LIMCCEJA_02311	3.35e-217	-	-	-	O	-	-	-	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
LIMCCEJA_02312	3.32e-285	sip	-	-	L	-	-	-	Belongs to the 'phage' integrase family
LIMCCEJA_02313	8.45e-140	-	-	-	K	ko:K07726	-	ko00000,ko03000	sequence-specific DNA binding
LIMCCEJA_02314	1.75e-14	-	-	-	K	ko:K07729	-	ko00000,ko03000	TRANSCRIPTIONal
LIMCCEJA_02315	4.94e-58	-	-	-	-	-	-	-	-
LIMCCEJA_02316	3.54e-43	-	-	-	-	-	-	-	-
LIMCCEJA_02317	3.46e-25	-	-	-	-	-	-	-	-
LIMCCEJA_02318	2.82e-40	-	-	-	-	-	-	-	-
LIMCCEJA_02319	6.03e-56	-	-	-	-	-	-	-	-
LIMCCEJA_02320	1.43e-35	-	-	-	-	-	-	-	-
LIMCCEJA_02321	1.07e-205	-	-	-	L	-	-	-	Bifunctional DNA primase/polymerase, N-terminal
LIMCCEJA_02322	0.0	-	-	-	S	-	-	-	Virulence-associated protein E
LIMCCEJA_02323	3.84e-103	-	-	-	-	-	-	-	-
LIMCCEJA_02324	3.53e-99	-	-	-	L	ko:K07451	-	ko00000,ko01000,ko02048	Phage-associated protein
LIMCCEJA_02325	8.05e-106	terS	-	-	L	-	-	-	Phage terminase, small subunit
LIMCCEJA_02326	0.0	terL	-	-	S	-	-	-	overlaps another CDS with the same product name
LIMCCEJA_02327	6.27e-31	-	-	-	-	-	-	-	-
LIMCCEJA_02328	4.72e-285	-	-	-	S	-	-	-	Phage portal protein
LIMCCEJA_02329	0.0	-	-	-	S	ko:K06904	-	ko00000	Phage capsid family
LIMCCEJA_02330	2.28e-63	-	-	-	S	-	-	-	Phage gp6-like head-tail connector protein
LIMCCEJA_02331	6.83e-18	-	-	-	S	-	-	-	Phage head-tail joining protein
LIMCCEJA_02332	2.3e-23	-	-	-	-	-	-	-	-
LIMCCEJA_02333	1.4e-35	ytgB	-	-	S	-	-	-	Transglycosylase associated protein
LIMCCEJA_02335	3.77e-217	prs2	2.7.6.1	-	F	ko:K00948	ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
LIMCCEJA_02336	2.32e-233	-	-	-	D	ko:K06889	-	ko00000	Alpha beta
LIMCCEJA_02337	9.48e-237	lipA	-	-	I	-	-	-	Carboxylesterase family
LIMCCEJA_02338	4.29e-276	mtlD	1.1.1.17	-	C	ko:K00009	ko00051,map00051	ko00000,ko00001,ko01000	mannitol-1-phosphate 5-dehydrogenase activity
LIMCCEJA_02339	5.35e-102	mtlF	2.7.1.197	-	G	ko:K02798	ko00051,ko02060,map00051,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
LIMCCEJA_02340	0.0	mtlR	-	-	K	ko:K03483	-	ko00000,ko03000	Mga helix-turn-helix domain
LIMCCEJA_02341	0.0	mtlA	2.7.1.197	-	G	ko:K02799,ko:K02800	ko00051,ko02060,map00051,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
LIMCCEJA_02342	1.02e-170	nagB	3.5.99.6	-	G	ko:K02564	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
LIMCCEJA_02343	1.35e-192	-	-	-	S	-	-	-	haloacid dehalogenase-like hydrolase
LIMCCEJA_02344	7.2e-60	-	-	-	-	-	-	-	-
LIMCCEJA_02345	1.1e-26	-	-	-	-	-	-	-	-
LIMCCEJA_02346	9.01e-180	-	-	-	-	-	-	-	-
LIMCCEJA_02347	3.21e-287	-	-	-	K	-	-	-	IrrE N-terminal-like domain
LIMCCEJA_02348	1.6e-197	hlyD3	-	-	M	ko:K02005	-	ko00000	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LIMCCEJA_02349	2.05e-162	-	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter
LIMCCEJA_02350	2.73e-265	yknZ	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	MacB-like periplasmic core domain
LIMCCEJA_02351	5.68e-242	-	-	-	-	-	-	-	-
LIMCCEJA_02352	0.0	-	-	-	M	-	-	-	Leucine rich repeats (6 copies)
LIMCCEJA_02354	8.18e-288	mtnE	-	-	E	ko:K08969	ko00270,ko01100,map00270,map01100	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase
LIMCCEJA_02355	1.34e-187	mtnU	3.5.1.3	-	S	ko:K13566	ko00250,map00250	ko00000,ko00001,ko01000	Carbon-nitrogen hydrolase
LIMCCEJA_02356	5.43e-192	-	-	-	M	ko:K02073	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	NLPA lipoprotein
LIMCCEJA_02359	7.4e-254	ypjH	-	-	C	ko:K08317	-	ko00000,ko01000	dehydrogenase
LIMCCEJA_02362	2.27e-290	amd	-	-	E	-	-	-	Peptidase family M20/M25/M40
LIMCCEJA_02363	1.8e-105	-	-	-	S	-	-	-	Threonine/Serine exporter, ThrE
LIMCCEJA_02364	2.57e-173	-	-	-	S	-	-	-	Putative threonine/serine exporter
LIMCCEJA_02366	6.86e-43	-	-	-	-	-	-	-	-
LIMCCEJA_02367	0.0	-	-	-	V	ko:K06147,ko:K06148	-	ko00000,ko02000	ABC transporter transmembrane region
LIMCCEJA_02368	0.0	gidA	-	-	D	ko:K03495	-	ko00000,ko03016,ko03036	NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
LIMCCEJA_02369	0.0	mnmE	-	-	S	ko:K03650	-	ko00000,ko01000,ko03016	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
LIMCCEJA_02370	5.21e-178	jag	-	-	S	ko:K06346	-	ko00000	R3H domain protein
LIMCCEJA_02371	8.28e-182	yidC	-	-	U	ko:K03217	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044,ko03029	Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
LIMCCEJA_02372	1.56e-78	rnpA	3.1.26.5	-	J	ko:K03536	-	ko00000,ko01000,ko03016	RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
LIMCCEJA_02374	3.26e-23	rpmH	-	-	J	ko:K02914	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL34 family
LIMCCEJA_02375	0.0	-	-	-	L	-	-	-	PFAM Integrase core domain
LIMCCEJA_02376	0.0	dnaA	-	-	L	ko:K02313	ko02020,ko04112,map02020,map04112	ko00000,ko00001,ko03032,ko03036	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
LIMCCEJA_02377	6.18e-262	dnaN	2.7.7.7	-	L	ko:K02338	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
LIMCCEJA_02378	1.21e-44	yaaA	-	-	S	ko:K14761	-	ko00000,ko03009	S4 domain protein YaaA
LIMCCEJA_02379	8.07e-259	recF	-	-	L	ko:K03629	ko03440,map03440	ko00000,ko00001,ko03400	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
LIMCCEJA_02380	0.0	gyrB	5.99.1.3	-	L	ko:K02470	-	ko00000,ko01000,ko03032,ko03400	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
LIMCCEJA_02381	0.0	gyrA	5.99.1.3	-	L	ko:K02469	-	ko00000,ko01000,ko03032,ko03400	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
LIMCCEJA_02382	6.04e-12	-	-	-	L	ko:K03111	ko03030,ko03430,ko03440,map03030,map03430,map03440	ko00000,ko00001,ko03029,ko03032,ko03400	Single-strand binding protein family
LIMCCEJA_02386	5.66e-08	deoC	4.1.2.4	-	F	ko:K01619	ko00030,map00030	ko00000,ko00001,ko01000	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
LIMCCEJA_02387	8.99e-99	-	-	-	L	ko:K03111	ko03030,ko03430,ko03440,map03030,map03430,map03440	ko00000,ko00001,ko03029,ko03032,ko03400	Single-strand binding protein family
LIMCCEJA_02388	2.26e-64	rpsF	-	-	J	ko:K02990	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Binds together with S18 to 16S ribosomal RNA
LIMCCEJA_02389	1.41e-130	ssb	-	-	L	ko:K03111	ko03030,ko03430,ko03440,map03030,map03430,map03440	ko00000,ko00001,ko03029,ko03032,ko03400	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
LIMCCEJA_02390	3.26e-48	rpsR	-	-	J	ko:K02963	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
LIMCCEJA_02391	2.22e-16	-	-	-	-	-	-	-	-
LIMCCEJA_02392	5.33e-119	yfkM	3.5.1.124	-	S	ko:K05520	-	ko00000,ko01000,ko01002	DJ-1/PfpI family
LIMCCEJA_02393	0.0	cydA	1.10.3.14	-	C	ko:K00425	ko00190,ko01100,ko02020,map00190,map01100,map02020	ko00000,ko00001,ko00002,ko01000	Cytochrome bd terminal oxidase subunit I
LIMCCEJA_02394	1.35e-238	-	-	-	C	-	-	-	Cytochrome bd terminal oxidase subunit II
LIMCCEJA_02395	1.76e-39	-	-	-	-	-	-	-	-
LIMCCEJA_02396	9.94e-143	XK27_07085	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
LIMCCEJA_02398	1.88e-100	-	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
LIMCCEJA_02399	1.47e-212	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter
LIMCCEJA_02400	2.48e-252	-	-	-	P	ko:K03320	-	ko00000,ko02000	Ammonium Transporter Family
LIMCCEJA_02401	3.65e-274	-	-	-	P	-	-	-	Pyridine nucleotide-disulphide oxidoreductase
LIMCCEJA_02402	1.6e-204	p40	-	-	D	ko:K21471	-	ko00000,ko01000,ko01002,ko01011	CHAP domain
LIMCCEJA_02403	0.0	ylbB	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter permease
LIMCCEJA_02404	3.54e-165	-	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
LIMCCEJA_02405	3.25e-125	-	-	-	K	-	-	-	transcriptional regulator
LIMCCEJA_02406	8.78e-197	-	-	-	G	-	-	-	Sucrose-6F-phosphate phosphohydrolase
LIMCCEJA_02407	1.7e-62	-	-	-	-	-	-	-	-
LIMCCEJA_02408	1.58e-164	-	-	-	S	ko:K07090	-	ko00000	membrane transporter protein
LIMCCEJA_02409	8.48e-134	-	-	-	S	-	-	-	Protein of unknown function (DUF1211)
LIMCCEJA_02410	9.22e-147	lacA	2.3.1.18, 2.3.1.79	-	S	ko:K00633,ko:K00661	-	ko00000,ko01000	Maltose acetyltransferase
LIMCCEJA_02411	1.54e-73	-	-	-	-	-	-	-	-
LIMCCEJA_02412	0.0	pepD	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
LIMCCEJA_02413	1.45e-143	-	-	-	S	-	-	-	Membrane
LIMCCEJA_02414	5.63e-114	-	-	-	-	-	-	-	-
LIMCCEJA_02415	4.41e-67	-	-	-	-	-	-	-	-
LIMCCEJA_02417	2.7e-232	-	-	-	M	-	-	-	Peptidoglycan-binding domain 1 protein
LIMCCEJA_02418	5.05e-66	-	-	-	-	-	-	-	-
LIMCCEJA_02419	0.0	ybfG	-	-	M	-	-	-	peptidoglycan-binding domain-containing protein
LIMCCEJA_02420	1.13e-158	azlC	-	-	E	-	-	-	branched-chain amino acid
LIMCCEJA_02421	1.29e-66	azlD	-	-	S	-	-	-	Branched-chain amino acid transport protein (AzlD)
LIMCCEJA_02422	0.0	-	3.2.1.31	-	G	ko:K01195	ko00040,ko00531,ko00860,ko00944,ko00983,ko01100,ko01110,ko04142,map00040,map00531,map00860,map00944,map00983,map01100,map01110,map04142	ko00000,ko00001,ko00002,ko01000	Belongs to the glycosyl hydrolase 2 family
LIMCCEJA_02423	0.0	-	-	-	M	-	-	-	Glycosyl hydrolase family 59
LIMCCEJA_02425	5.06e-152	eda	4.1.2.14, 4.1.3.42	-	G	ko:K01625	ko00030,ko00630,ko01100,ko01120,ko01200,map00030,map00630,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	KDPG and KHG aldolase
LIMCCEJA_02426	3.83e-230	kdgK	2.7.1.45	-	G	ko:K00874	ko00030,ko01100,ko01120,ko01200,map00030,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	pfkB family carbohydrate kinase
LIMCCEJA_02427	7.4e-215	uxaC	5.3.1.12	-	G	ko:K01812	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko00002,ko01000	glucuronate isomerase
LIMCCEJA_02428	3.71e-137	uxaC	5.3.1.12	-	G	ko:K01812	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko00002,ko01000	glucuronate isomerase
LIMCCEJA_02429	6.06e-278	uxuA	4.2.1.8	-	G	ko:K01686	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the dehydration of D-mannonate
LIMCCEJA_02430	0.0	uxuB	1.1.1.57	-	G	ko:K00040	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko00002,ko01000	Mannitol dehydrogenase C-terminal domain
LIMCCEJA_02431	2.3e-293	-	-	-	G	-	-	-	Major Facilitator
LIMCCEJA_02432	1.34e-163	kdgR	-	-	K	-	-	-	FCD domain
LIMCCEJA_02433	1.44e-245	kdgK	2.7.1.45	-	G	ko:K00874	ko00030,ko01100,ko01120,ko01200,map00030,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	pfkB family carbohydrate kinase
LIMCCEJA_02434	0.0	-	-	-	M	-	-	-	Glycosyl hydrolase family 59
LIMCCEJA_02435	3.4e-78	ps105	-	-	-	-	-	-	-
LIMCCEJA_02436	1.31e-85	-	-	-	S	-	-	-	pyridoxamine 5-phosphate
LIMCCEJA_02437	1.98e-313	-	-	-	EGP	-	-	-	Major Facilitator
LIMCCEJA_02438	6.91e-280	-	3.1.1.83	-	I	ko:K14731	ko00903,ko00930,ko01220,map00903,map00930,map01220	ko00000,ko00001,ko01000	Alpha beta hydrolase
LIMCCEJA_02439	3.96e-155	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
LIMCCEJA_02441	0.0	ydgH	-	-	S	ko:K06994	-	ko00000	MMPL family
LIMCCEJA_02442	4.54e-138	-	-	-	K	ko:K22106	-	ko00000,ko03000	Tetracycline repressor, C-terminal all-alpha domain
LIMCCEJA_02443	5.55e-157	-	-	-	S	ko:K07090	-	ko00000	Sulfite exporter TauE/SafE
LIMCCEJA_02444	0.0	-	3.5.4.28, 3.5.4.31	-	F	ko:K12960	ko00270,ko01100,map00270,map01100	ko00000,ko00001,ko01000	Amidohydrolase family
LIMCCEJA_02445	4.53e-90	-	-	-	S	-	-	-	An automated process has identified a potential problem with this gene model
LIMCCEJA_02446	5.87e-192	-	-	-	S	-	-	-	Protein of unknown function (DUF3100)
LIMCCEJA_02448	1.37e-142	opuCD	-	-	P	ko:K05846	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
LIMCCEJA_02449	3.39e-226	opuCC	-	-	M	ko:K05845	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Periplasmic glycine betaine choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)
LIMCCEJA_02450	2.13e-136	opuCB	-	-	E	ko:K05846	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
LIMCCEJA_02451	7.45e-279	opuCA	-	-	E	ko:K05847	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter, ATP-binding protein
LIMCCEJA_02452	5.26e-70	-	-	-	S	-	-	-	Protein of unknown function (DUF2568)
LIMCCEJA_02453	3.6e-92	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
LIMCCEJA_02455	0.0	cadA	3.6.3.3, 3.6.3.5	-	P	ko:K01534	-	ko00000,ko01000	P-type ATPase
LIMCCEJA_02456	7.29e-46	copZ	-	-	P	-	-	-	Heavy-metal-associated domain
LIMCCEJA_02457	2.65e-133	dpsB	-	-	P	-	-	-	Belongs to the Dps family
LIMCCEJA_02458	4.48e-152	flp	-	-	K	ko:K21562	-	ko00000,ko03000	helix_turn_helix, cAMP Regulatory protein
LIMCCEJA_02459	5.03e-128	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
LIMCCEJA_02460	4.02e-116	-	-	-	S	-	-	-	Protein of unknown function with HXXEE motif
LIMCCEJA_02462	5.29e-206	-	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
LIMCCEJA_02463	6.93e-261	-	2.7.1.191, 2.7.1.202	-	G	ko:K02769,ko:K02770,ko:K02794,ko:K02795	ko00051,ko00520,ko01100,ko01120,ko02060,map00051,map00520,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
LIMCCEJA_02464	3.45e-64	-	2.7.1.191, 2.7.1.202	-	G	ko:K02769,ko:K02770,ko:K02794,ko:K02795	ko00051,ko00520,ko01100,ko01120,ko02060,map00051,map00520,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
LIMCCEJA_02465	2.07e-106	frvA	2.7.1.202	-	G	ko:K02768	ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
LIMCCEJA_02466	0.0	mngB	3.2.1.170	GH38	G	ko:K15524	-	ko00000,ko01000	Glycosyl hydrolases family 38 N-terminal domain
LIMCCEJA_02467	1.05e-181	-	-	-	K	-	-	-	SIS domain
LIMCCEJA_02468	0.0	-	3.2.1.21, 3.2.1.85, 3.2.1.86	GT1	G	ko:K01220,ko:K01223,ko:K05350	ko00010,ko00052,ko00460,ko00500,ko00940,ko01100,ko01110,map00010,map00052,map00460,map00500,map00940,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
LIMCCEJA_02469	3.33e-208	bglK_1	-	-	GK	-	-	-	ROK family
LIMCCEJA_02471	3.66e-185	trpA	4.2.1.20	-	E	ko:K01695	ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
LIMCCEJA_02472	1.67e-291	trpB	4.2.1.20, 5.3.1.24	-	E	ko:K01696,ko:K01817	ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
LIMCCEJA_02473	2.53e-139	trpF	5.3.1.24	-	E	ko:K01817	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the TrpF family
LIMCCEJA_02474	1.37e-175	trpC	4.1.1.48, 5.3.1.24	-	E	ko:K01609,ko:K13498	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the TrpC family
LIMCCEJA_02475	4.15e-234	trpD	2.4.2.18, 4.1.3.27	-	F	ko:K00766,ko:K13497	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
LIMCCEJA_02476	0.0	-	-	-	EGP	-	-	-	Major Facilitator
LIMCCEJA_02477	9.98e-146	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
LIMCCEJA_02478	1.67e-159	-	-	-	-	-	-	-	-
LIMCCEJA_02480	1.93e-137	-	5.1.3.13	-	M	ko:K01790	ko00521,ko00523,ko01130,map00521,map00523,map01130	ko00000,ko00001,ko00002,ko01000	dTDP-4-dehydrorhamnose 3,5-epimerase
LIMCCEJA_02481	3.28e-181	dapB	1.17.1.8	-	E	ko:K00215	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
LIMCCEJA_02482	8.2e-214	dapA	4.3.3.7	-	E	ko:K01714	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
LIMCCEJA_02483	2.73e-285	hipO	3.5.1.47	-	E	ko:K05823	ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000,ko01002	Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
LIMCCEJA_02484	1.79e-115	dapH	2.3.1.117, 2.3.1.89	-	E	ko:K00674,ko:K05822	ko00300,ko01100,ko01110,ko01120,ko01230,map00300,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
LIMCCEJA_02485	0.0	lysA	4.1.1.20	-	E	ko:K01586	ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
LIMCCEJA_02486	0.0	lysC	2.7.2.4	-	E	ko:K00928	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the aspartokinase family
LIMCCEJA_02487	3.6e-241	dapF	5.1.1.7	-	E	ko:K01778	ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
LIMCCEJA_02488	3.52e-252	asd	1.2.1.11	-	E	ko:K00133	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
LIMCCEJA_02489	8.46e-84	-	-	-	-	-	-	-	-
LIMCCEJA_02490	8.49e-66	-	-	-	K	-	-	-	sequence-specific DNA binding
LIMCCEJA_02491	1.64e-98	-	-	-	L	-	-	-	NUDIX domain
LIMCCEJA_02492	1.38e-196	-	-	-	EG	-	-	-	EamA-like transporter family
LIMCCEJA_02494	0.0	yybT	-	-	T	-	-	-	signaling protein consisting of a modified GGDEF domain and a DHH domain
LIMCCEJA_02495	4.7e-98	rplI	-	-	J	ko:K02939	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to the 23S rRNA
LIMCCEJA_02496	0.0	dnaB	3.6.4.12	-	L	ko:K02314	ko03030,ko04112,map03030,map04112	ko00000,ko00001,ko01000,ko03032	Participates in initiation and elongation during chromosome replication
LIMCCEJA_02497	3.05e-282	-	-	-	-	-	-	-	-
LIMCCEJA_02498	0.0	pts32BC	2.7.1.211	-	G	ko:K02808,ko:K02809,ko:K02810	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
LIMCCEJA_02499	1.3e-210	murQ	4.2.1.126	-	G	ko:K07106	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
LIMCCEJA_02500	4.64e-255	-	4.2.1.126	-	S	ko:K07106,ko:K09963	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Bacterial protein of unknown function (DUF871)
LIMCCEJA_02501	4.34e-203	yleF	-	-	K	-	-	-	Helix-turn-helix domain, rpiR family
LIMCCEJA_02502	1.71e-138	-	-	-	K	-	-	-	Transcriptional regulator C-terminal region
LIMCCEJA_02503	1.9e-165	-	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
LIMCCEJA_02504	0.0	ylbB	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter permease
LIMCCEJA_02505	2.16e-266	-	4.1.1.52	-	S	ko:K22213	-	ko00000,ko01000	Amidohydrolase
LIMCCEJA_02506	0.0	purA	6.3.4.4	-	F	ko:K01939	ko00230,ko00250,ko01100,map00230,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
LIMCCEJA_02507	0.0	cadA	3.6.3.3, 3.6.3.5	-	P	ko:K01534	-	ko00000,ko01000	P-type ATPase
LIMCCEJA_02508	1.78e-73	cadC5	-	-	K	ko:K21903	-	ko00000,ko03000	helix_turn_helix, Arsenical Resistance Operon Repressor
LIMCCEJA_02510	7.78e-264	pmrB	-	-	EGP	-	-	-	Major Facilitator Superfamily
LIMCCEJA_02511	0.0	nrdD	1.1.98.6	-	F	ko:K21636	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Ribonucleoside-triphosphate reductase
LIMCCEJA_02512	3.29e-169	-	-	-	-	-	-	-	-
LIMCCEJA_02513	9.52e-37	-	-	-	-	-	-	-	-
LIMCCEJA_02516	7.4e-196	-	-	-	K	-	-	-	Bacteriophage CI repressor helix-turn-helix domain
LIMCCEJA_02517	3.94e-222	-	-	-	L	-	-	-	Transposase
LIMCCEJA_02518	2.83e-238	yveB	-	-	I	-	-	-	PAP2 superfamily
LIMCCEJA_02519	1.48e-272	mccF	-	-	V	-	-	-	LD-carboxypeptidase
LIMCCEJA_02520	4.61e-57	-	-	-	-	-	-	-	-
LIMCCEJA_02521	1.99e-262	ddl	6.3.2.4	-	F	ko:K01921	ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Belongs to the D-alanine--D-alanine ligase family
LIMCCEJA_02522	1.56e-55	-	-	-	-	-	-	-	-
LIMCCEJA_02523	7.43e-144	-	-	-	-	-	-	-	-
LIMCCEJA_02524	4.41e-293	-	-	-	EGP	-	-	-	Major Facilitator Superfamily
LIMCCEJA_02525	1.11e-111	-	-	-	-	-	-	-	-
LIMCCEJA_02526	5.89e-257	yclK	-	-	T	-	-	-	Histidine kinase
LIMCCEJA_02527	4.14e-155	-	-	-	K	-	-	-	Transcriptional regulatory protein, C terminal
LIMCCEJA_02528	2.11e-118	adaB	2.1.1.63	-	L	ko:K00567,ko:K10778,ko:K13531	-	ko00000,ko01000,ko03000,ko03400	Methyltransferase
LIMCCEJA_02529	1.17e-245	ldhD3	1.1.1.28	-	CH	ko:K03778	ko00620,ko01120,map00620,map01120	ko00000,ko00001,ko01000	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
LIMCCEJA_02530	2.99e-65	ptcB	2.7.1.196, 2.7.1.205	-	G	ko:K02760	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
LIMCCEJA_02531	4.89e-70	celC	2.7.1.196, 2.7.1.205	-	G	ko:K02759	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIA subunit
LIMCCEJA_02532	1.66e-111	-	-	-	-	-	-	-	-
LIMCCEJA_02533	0.0	celD	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
LIMCCEJA_02534	0.0	bglA	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
LIMCCEJA_02535	5.01e-171	-	-	-	K	ko:K03489	-	ko00000,ko03000	UTRA
LIMCCEJA_02536	1.66e-57	-	-	-	-	-	-	-	-
LIMCCEJA_02537	1e-76	-	-	-	S	ko:K08987	-	ko00000	Protein of unknown function (DUF1304)
LIMCCEJA_02538	9.85e-72	-	-	-	S	-	-	-	Protein of unknown function (DUF1516)
LIMCCEJA_02539	0.0	XK27_07275	-	-	S	ko:K06901	-	ko00000,ko02000	permease
LIMCCEJA_02540	1.06e-73	-	-	-	S	ko:K09004	-	ko00000	DsrE/DsrF-like family
LIMCCEJA_02543	4.16e-178	ytlC	3.6.3.36	-	P	ko:K02049,ko:K10831,ko:K15555	ko00920,ko02010,map00920,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATPases associated with a variety of cellular activities
LIMCCEJA_02544	1.06e-234	-	-	-	P	ko:K15551	ko00920,ko02010,map00920,map02010	ko00000,ko00001,ko00002,ko02000	NMT1-like family
LIMCCEJA_02545	8.04e-184	-	-	-	P	ko:K02050,ko:K15552	ko00920,ko02010,map00920,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
LIMCCEJA_02546	0.0	-	-	-	P	-	-	-	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
LIMCCEJA_02547	0.0	-	-	-	S	ko:K07112	-	ko00000	Sulphur transport
LIMCCEJA_02548	8.52e-211	-	-	-	K	-	-	-	LysR substrate binding domain
LIMCCEJA_02549	3.61e-245	mhqA	-	-	E	ko:K15975	-	ko00000	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
LIMCCEJA_02550	8.2e-58	-	-	-	-	-	-	-	-
LIMCCEJA_02551	9.29e-138	yoaA	-	-	J	-	-	-	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LIMCCEJA_02552	0.0	-	-	-	-	-	-	-	-
LIMCCEJA_02554	6.03e-179	-	-	-	S	-	-	-	WxL domain surface cell wall-binding
LIMCCEJA_02555	2.83e-241	ynjC	-	-	S	-	-	-	Cell surface protein
LIMCCEJA_02557	0.0	-	-	-	L	-	-	-	Mga helix-turn-helix domain
LIMCCEJA_02558	1.81e-226	-	-	-	S	-	-	-	Protein of unknown function (DUF805)
LIMCCEJA_02559	7.16e-77	-	-	-	-	-	-	-	-
LIMCCEJA_02560	0.0	rarA	-	-	L	ko:K07478	-	ko00000	recombination factor protein RarA
LIMCCEJA_02561	1.02e-280	ackA	2.7.2.1	-	F	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
LIMCCEJA_02562	8.96e-172	-	-	-	K	-	-	-	DeoR C terminal sensor domain
LIMCCEJA_02563	0.0	-	2.7.1.17	-	G	ko:K00854	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko00002,ko01000	FGGY family of carbohydrate kinases, C-terminal domain
LIMCCEJA_02564	9.14e-205	-	4.1.2.13	-	G	ko:K01624	ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Fructose-bisphosphate aldolase class-II
LIMCCEJA_02565	2.21e-309	-	-	-	S	ko:K03475	ko00053,ko01100,ko01120,ko02060,map00053,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko02000	PTS system sugar-specific permease component
LIMCCEJA_02566	1.16e-204	pphA	3.1.3.16	-	T	ko:K07313	-	ko00000,ko01000	Calcineurin-like phosphoesterase superfamily domain
LIMCCEJA_02567	7.19e-177	-	-	-	L	ko:K07457	-	ko00000	Base excision DNA repair protein, HhH-GPD family
LIMCCEJA_02568	0.0	bmr3	-	-	EGP	-	-	-	Major Facilitator
LIMCCEJA_02569	3.05e-29	-	-	-	-	-	-	-	-
LIMCCEJA_02571	0.0	xfp	4.1.2.22, 4.1.2.9	-	G	ko:K01621	ko00030,ko00710,ko01100,ko01120,map00030,map00710,map01100,map01120	ko00000,ko00001,ko01000	Phosphoketolase
LIMCCEJA_02572	0.0	oppA	-	-	E	ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
LIMCCEJA_02573	2.26e-118	-	-	-	-	-	-	-	-
LIMCCEJA_02574	1.41e-151	-	-	-	-	-	-	-	-
LIMCCEJA_02575	2.88e-165	-	-	-	-	-	-	-	-
LIMCCEJA_02576	6.87e-153	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
LIMCCEJA_02577	8.68e-104	-	-	-	-	-	-	-	-
LIMCCEJA_02578	1.1e-107	-	-	-	S	-	-	-	NUDIX domain
LIMCCEJA_02579	7.96e-273	-	-	-	S	-	-	-	nuclear-transcribed mRNA catabolic process, no-go decay
LIMCCEJA_02580	0.0	-	-	-	V	-	-	-	ABC transporter transmembrane region
LIMCCEJA_02581	2.16e-209	-	-	-	K	ko:K20373,ko:K20374,ko:K20375	ko02024,map02024	ko00000,ko00001,ko03000	Transcriptional activator, Rgg GadR MutR family
LIMCCEJA_02582	0.0	fnq20	-	-	S	-	-	-	FAD-NAD(P)-binding
LIMCCEJA_02583	0.0	nox	1.6.3.4	-	C	ko:K17869	-	ko00000,ko01000	NADH oxidase
LIMCCEJA_02584	6.18e-150	-	-	-	-	-	-	-	-
LIMCCEJA_02585	2.57e-308	-	-	-	S	ko:K06872	-	ko00000	TPM domain
LIMCCEJA_02586	1.42e-183	yunE	-	-	S	ko:K07090	-	ko00000	Sulfite exporter TauE/SafE
LIMCCEJA_02587	1.58e-74	ywjH	-	-	S	-	-	-	Protein of unknown function (DUF1634)
LIMCCEJA_02588	1.47e-07	-	-	-	-	-	-	-	-
LIMCCEJA_02589	8.87e-85	-	-	-	-	-	-	-	-
LIMCCEJA_02590	2.59e-69	-	-	-	-	-	-	-	-
LIMCCEJA_02591	1.63e-109	-	-	-	C	-	-	-	Flavodoxin
LIMCCEJA_02592	4.57e-49	-	-	-	-	-	-	-	-
LIMCCEJA_02593	4.87e-37	-	-	-	-	-	-	-	-
LIMCCEJA_02594	7.34e-222	-	1.1.1.26	-	CH	ko:K00015	ko00630,ko01100,ko01110,ko01120,map00630,map01100,map01110,map01120	ko00000,ko00001,ko01000	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
LIMCCEJA_02595	1.87e-93	-	-	-	S	ko:K07006	-	ko00000	Pyridoxamine 5'-phosphate oxidase
LIMCCEJA_02596	1.55e-51	-	-	-	S	-	-	-	Transglycosylase associated protein
LIMCCEJA_02597	2.04e-117	-	-	-	S	-	-	-	Protein conserved in bacteria
LIMCCEJA_02598	9.32e-40	-	-	-	-	-	-	-	-
LIMCCEJA_02599	1.62e-80	asp23	-	-	S	-	-	-	Asp23 family, cell envelope-related function
LIMCCEJA_02600	3.02e-87	asp2	-	-	S	-	-	-	Asp23 family, cell envelope-related function
LIMCCEJA_02601	2.34e-167	-	3.8.1.2	-	S	ko:K01560	ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120	ko00000,ko00001,ko01000	Haloacid dehalogenase-like hydrolase
LIMCCEJA_02602	4.96e-148	-	-	-	S	-	-	-	Protein of unknown function (DUF969)
LIMCCEJA_02603	4.3e-147	-	-	-	S	-	-	-	Protein of unknown function (DUF979)
LIMCCEJA_02604	8.43e-155	pcp	3.4.19.3	-	O	ko:K01304	-	ko00000,ko01000,ko01002	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
LIMCCEJA_02605	2.06e-137	-	1.5.1.40	-	S	ko:K06988	-	ko00000,ko01000	NADP oxidoreductase coenzyme F420-dependent
LIMCCEJA_02607	3.57e-165	cobQ	-	-	S	ko:K07009	-	ko00000	glutamine amidotransferase
LIMCCEJA_02608	8.1e-87	-	-	-	-	-	-	-	-
LIMCCEJA_02609	9.03e-173	rsmG	2.1.1.170	-	J	ko:K03501	-	ko00000,ko01000,ko03009,ko03036	Specifically methylates the N7 position of a guanine in 16S rRNA
LIMCCEJA_02610	5.2e-188	noc	-	-	K	ko:K03497	-	ko00000,ko03000,ko03036,ko04812	Belongs to the ParB family
LIMCCEJA_02611	1.28e-178	soj	-	-	D	ko:K03496	-	ko00000,ko03036,ko04812	Sporulation initiation inhibitor
LIMCCEJA_02612	1.11e-201	spo0J	-	-	K	ko:K03497	-	ko00000,ko03000,ko03036,ko04812	Belongs to the ParB family
LIMCCEJA_02613	8.4e-42	yyzM	-	-	S	-	-	-	Bacterial protein of unknown function (DUF951)
LIMCCEJA_02614	5.66e-257	ychF	-	-	J	ko:K06942	-	ko00000,ko03009	ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
LIMCCEJA_02615	2.39e-182	-	-	-	S	-	-	-	Protein of unknown function (DUF1129)
LIMCCEJA_02616	0.0	guaB	1.1.1.205	-	F	ko:K00088	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
LIMCCEJA_02617	1.19e-161	-	-	-	-	-	-	-	-
LIMCCEJA_02618	1.68e-156	vanR	-	-	K	-	-	-	response regulator
LIMCCEJA_02619	1.45e-280	hpk31	-	-	T	-	-	-	Histidine kinase
LIMCCEJA_02620	8.22e-305	dacA	3.4.16.4	-	M	ko:K01286,ko:K07258	ko00550,ko01100,map00550,map01100	ko00000,ko00001,ko01000,ko01002,ko01011	Belongs to the peptidase S11 family
LIMCCEJA_02621	2.55e-111	greA	-	-	K	ko:K03624	-	ko00000,ko03021	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
LIMCCEJA_02622	0.0	murE	6.3.2.13, 6.3.2.7	-	M	ko:K01928,ko:K05362	ko00300,ko00550,ko01100,map00300,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
LIMCCEJA_02623	3.16e-181	racD	5.1.1.13	-	G	ko:K01779	ko00250,ko01054,map00250,map01054	ko00000,ko00001,ko01000	Belongs to the aspartate glutamate racemases family
LIMCCEJA_02624	9.98e-212	yvgN	-	-	C	-	-	-	Aldo keto reductase
LIMCCEJA_02625	9.72e-183	iolR	-	-	K	ko:K06608,ko:K11534	-	ko00000,ko03000	DeoR C terminal sensor domain
LIMCCEJA_02626	0.0	iolT	-	-	EGP	ko:K06609	-	ko00000,ko02000	Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family
LIMCCEJA_02627	0.0	iolA	1.2.1.18, 1.2.1.27	-	C	ko:K00140	ko00280,ko00410,ko00562,ko00640,ko01100,ko01200,map00280,map00410,map00562,map00640,map01100,map01200	ko00000,ko00001,ko00002,ko01000	Belongs to the aldehyde dehydrogenase family
LIMCCEJA_02628	1.78e-202	iolB	5.3.1.30	-	G	ko:K03337	ko00562,ko01100,ko01120,map00562,map01100,map01120	ko00000,ko00001,ko01000	Involved in the isomerization of 5-deoxy-glucuronate (5DG) to 5-dehydro-2-deoxy-D-gluconate (DKG or 2-deoxy-5-keto-D- gluconate)
LIMCCEJA_02629	2.79e-228	iolC	2.7.1.92	-	H	ko:K03338	ko00562,ko01100,ko01120,map00562,map01100,map01120	ko00000,ko00001,ko01000	Catalyzes the phosphorylation of 5-dehydro-2-deoxy-D- gluconate (2-deoxy-5-keto-D-gluconate or DKG) to 6-phospho-5- dehydro-2-deoxy-D-gluconate (DKGP)
LIMCCEJA_02630	0.0	iolD	3.7.1.22	-	E	ko:K03336	ko00562,ko01100,ko01120,map00562,map01100,map01120	ko00000,ko00001,ko01000	Involved in the cleavage of the C1-C2 bond of 3D- (3,5 4)-trihydroxycyclohexane-1,2-dione (THcHDO) to yield 5-deoxy- glucuronate (5DG)
LIMCCEJA_02631	1.94e-246	iolG	1.1.1.18, 1.1.1.369	-	C	ko:K00010	ko00521,ko00562,ko01100,ko01120,ko01130,map00521,map00562,map01100,map01120,map01130	ko00000,ko00001,ko01000	Involved in the oxidation of myo-inositol (MI) and D- chiro-inositol (DCI) to 2-keto-myo-inositol (2KMI or 2-inosose) and 1-keto-D-chiro-inositol (1KDCI), respectively
LIMCCEJA_02632	1.01e-250	iolG2	1.1.1.18, 1.1.1.369	-	S	ko:K00010	ko00521,ko00562,ko01100,ko01120,ko01130,map00521,map00562,map01100,map01120,map01130	ko00000,ko00001,ko01000	Oxidoreductase family, C-terminal alpha/beta domain
LIMCCEJA_02633	1.54e-224	iolE	4.2.1.44	-	G	ko:K03335	ko00562,ko01100,ko01120,map00562,map01100,map01120	ko00000,ko00001,ko01000	Catalyzes the dehydration of inosose (2-keto-myo- inositol, 2KMI or 2,4,6 3,5-pentahydroxycyclohexanone) to 3D- (3,5 4)-trihydroxycyclohexane-1,2-dione (D-2,3-diketo-4-deoxy-epi- inositol)
LIMCCEJA_02634	4.19e-206	iolJ	4.1.2.13, 4.1.2.29	-	G	ko:K01624,ko:K03339	ko00010,ko00030,ko00051,ko00562,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00562,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Fructose-bisphosphate aldolase class-II
LIMCCEJA_02635	1.75e-87	yodA	-	-	S	-	-	-	Tautomerase enzyme
LIMCCEJA_02636	7.85e-209	-	5.3.99.11	-	G	ko:K06606	ko00562,ko01120,map00562,map01120	ko00000,ko00001,ko01000	Xylose isomerase-like TIM barrel
LIMCCEJA_02637	1.54e-217	iolH	-	-	G	ko:K06605	-	ko00000	Xylose isomerase-like TIM barrel
LIMCCEJA_02638	9.72e-191	gntR	-	-	K	-	-	-	rpiR family
LIMCCEJA_02639	2.98e-217	gntZ	1.1.1.343, 1.1.1.44	-	G	ko:K00033	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Dehydrogenase
LIMCCEJA_02640	0.0	gntK	2.7.1.12	-	G	ko:K00851	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko01000	Belongs to the FGGY kinase family
LIMCCEJA_02641	7.99e-271	gntP	-	-	EG	ko:K03299	-	ko00000,ko02000	Gluconate
LIMCCEJA_02642	0.0	-	-	-	S	-	-	-	O-antigen ligase like membrane protein
LIMCCEJA_02643	7.49e-196	-	-	-	S	-	-	-	Glycosyl transferase family 2
LIMCCEJA_02644	4.14e-163	welB	-	-	S	-	-	-	Glycosyltransferase like family 2
LIMCCEJA_02645	5.12e-243	-	-	GT2	M	ko:K12997	-	ko00000,ko01000,ko01003,ko01005	Glycosyl transferase family 2
LIMCCEJA_02646	0.0	cps1C	-	-	S	ko:K03328	-	ko00000	Membrane protein involved in the export of O-antigen and teichoic acid
LIMCCEJA_02647	3.37e-250	-	-	-	S	-	-	-	Protein conserved in bacteria
LIMCCEJA_02648	3.2e-76	-	-	-	-	-	-	-	-
LIMCCEJA_02649	8.68e-169	adcC	-	-	P	ko:K02074,ko:K09817,ko:K11710	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter
LIMCCEJA_02650	2.96e-173	znuB	-	-	U	ko:K02075,ko:K09816	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC 3 transport family
LIMCCEJA_02651	1.13e-215	prpA3	3.1.3.16	-	T	ko:K01090	-	ko00000,ko01000	Calcineurin-like phosphoesterase superfamily domain
LIMCCEJA_02652	1.04e-209	glxR	1.1.1.31	-	I	ko:K00020	ko00280,ko01100,map00280,map01100	ko00000,ko00001,ko01000	Dehydrogenase
LIMCCEJA_02653	0.0	pepF	-	-	E	ko:K08602	-	ko00000,ko01000,ko01002	oligoendopeptidase F
LIMCCEJA_02654	6.87e-256	brpA	-	-	K	-	-	-	Cell envelope-like function transcriptional attenuator common domain protein
LIMCCEJA_02655	7.52e-315	brnQ	-	-	U	ko:K03311	-	ko00000	Component of the transport system for branched-chain amino acids
LIMCCEJA_02656	2e-101	-	-	-	T	-	-	-	Sh3 type 3 domain protein
LIMCCEJA_02657	2.29e-175	glcR	-	-	K	ko:K22103	-	ko00000,ko03000	DeoR C terminal sensor domain
LIMCCEJA_02658	3.43e-190	-	-	-	M	-	-	-	Glycosyltransferase like family 2
LIMCCEJA_02659	2.7e-173	-	-	-	S	-	-	-	Protein of unknown function (DUF975)
LIMCCEJA_02660	5.1e-71	-	-	-	-	-	-	-	-
LIMCCEJA_02661	4.32e-138	lepB	3.4.21.89	-	U	ko:K03100	ko02024,ko03060,map02024,map03060	ko00000,ko00001,ko01000,ko01002	Belongs to the peptidase S26 family
LIMCCEJA_02662	3.52e-225	-	3.2.2.24	-	O	ko:K05521	-	ko00000,ko01000	ADP-ribosylglycohydrolase
LIMCCEJA_02663	0.0	-	-	-	S	-	-	-	ABC transporter
LIMCCEJA_02664	2.23e-180	ksgA	2.1.1.182, 2.1.1.197, 2.5.1.134	-	J	ko:K02169,ko:K02528,ko:K17216,ko:K17462	ko00270,ko00780,ko01100,ko01230,map00270,map00780,map01100,map01230	ko00000,ko00001,ko00002,ko01000,ko03009	rRNA (adenine-N6,N6-)-dimethyltransferase activity
LIMCCEJA_02665	1.46e-57	trxA	-	-	O	ko:K03671	ko04621,ko05418,map04621,map05418	ko00000,ko00001,ko03110	Belongs to the thioredoxin family
LIMCCEJA_02666	8.41e-172	-	-	-	S	-	-	-	Putative threonine/serine exporter
LIMCCEJA_02667	5.92e-97	-	-	-	S	-	-	-	Threonine/Serine exporter, ThrE
LIMCCEJA_02669	5.62e-274	livJ	-	-	E	ko:K01999	ko02010,ko02024,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Receptor family ligand binding region
LIMCCEJA_02670	5.16e-192	livH	-	-	U	ko:K01997	ko02010,ko02024,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Branched-chain amino acid transport system / permease component
LIMCCEJA_02671	8.13e-185	livM	-	-	E	ko:K01997,ko:K01998	ko02010,ko02024,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Branched-chain amino acid transport system / permease component
LIMCCEJA_02672	1.74e-179	livG	-	-	E	ko:K01995	ko02010,ko02024,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Branched-chain amino acid ATP-binding cassette transporter
LIMCCEJA_02673	4.25e-160	livF	-	-	E	ko:K01996	ko02010,ko02024,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter
LIMCCEJA_02674	5.08e-72	-	-	-	S	-	-	-	MazG nucleotide pyrophosphohydrolase domain
LIMCCEJA_02675	5.34e-214	-	-	-	S	-	-	-	Alpha/beta hydrolase of unknown function (DUF915)
LIMCCEJA_02676	1.66e-305	pts14C	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
LIMCCEJA_02677	1.99e-148	deoC	4.1.2.4	-	F	ko:K01619	ko00030,map00030	ko00000,ko00001,ko01000	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
LIMCCEJA_02678	6.82e-295	deoB	5.4.2.7	-	G	ko:K01839	ko00030,ko00230,map00030,map00230	ko00000,ko00001,ko01000	Phosphotransfer between the C1 and C5 carbon atoms of pentose
LIMCCEJA_02679	5.43e-167	deoD	2.4.2.1	-	F	ko:K03784	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	Purine nucleoside phosphorylase
LIMCCEJA_02680	1.09e-217	p75	-	-	M	ko:K21471	-	ko00000,ko01000,ko01002,ko01011	NlpC P60 family protein
LIMCCEJA_02681	0.0	nox	1.6.3.4	-	C	ko:K17869	-	ko00000,ko01000	NADH oxidase
LIMCCEJA_02682	1.16e-208	-	-	-	-	-	-	-	-
LIMCCEJA_02683	1.38e-154	-	-	-	-	-	-	-	-
LIMCCEJA_02684	0.0	uvrB3	3.1.12.1	-	KL	ko:K07464	-	ko00000,ko01000,ko02048	DEAD_2
LIMCCEJA_02685	3.35e-305	-	-	-	G	ko:K02027	-	ko00000,ko00002,ko02000	Bacterial extracellular solute-binding protein
LIMCCEJA_02686	1.1e-114	-	-	-	-	-	-	-	-
LIMCCEJA_02687	1.66e-249	manA	5.3.1.8	-	G	ko:K01809	ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	mannose-6-phosphate isomerase
LIMCCEJA_02688	1.33e-167	-	-	-	K	ko:K03710	-	ko00000,ko03000	UTRA
LIMCCEJA_02689	2.82e-281	agaS	-	-	G	ko:K02082	-	ko00000,ko01000	SIS domain
LIMCCEJA_02690	1.12e-288	nagA	3.5.1.25	-	G	ko:K01443	ko00520,ko01130,map00520,map01130	ko00000,ko00001,ko01000	Belongs to the metallo-dependent hydrolases superfamily. NagA family
LIMCCEJA_02691	0.0	bgaC	3.2.1.23	-	G	ko:K12308	ko00052,map00052	ko00000,ko00001,ko01000	Glycosyl hydrolases family 35
LIMCCEJA_02692	3.25e-107	-	2.7.1.191	-	G	ko:K02794	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system sorbose subfamily IIB component
LIMCCEJA_02693	3.11e-166	-	-	-	G	ko:K02795	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	PTS system sorbose-specific iic component
LIMCCEJA_02694	2.21e-188	-	-	-	G	ko:K02796	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	PTS system mannose/fructose/sorbose family IID component
LIMCCEJA_02695	1.91e-85	-	2.7.1.191	-	G	ko:K02793	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system fructose IIA component
LIMCCEJA_02696	4.29e-226	lacC	2.7.1.144	-	F	ko:K00917	ko00052,ko01100,map00052,map01100	ko00000,ko00001,ko01000	pfkB family carbohydrate kinase
LIMCCEJA_02697	1.69e-189	srlD	1.1.1.140	-	IQ	ko:K00068	ko00051,map00051	ko00000,ko00001,ko01000	KR domain
LIMCCEJA_02698	1.74e-308	-	-	-	G	ko:K02775	ko00052,ko01100,ko02060,map00052,map01100,map02060	ko00000,ko00001,ko00002,ko02000	PTS system sugar-specific permease component
LIMCCEJA_02699	1.7e-112	-	2.7.1.200	-	G	ko:K02773	ko00052,ko01100,ko02060,map00052,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
LIMCCEJA_02700	8.14e-63	-	2.7.1.200	-	G	ko:K02774	ko00052,ko01100,ko02060,map00052,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
LIMCCEJA_02701	1.12e-208	-	-	-	-	-	-	-	-
LIMCCEJA_02702	0.0	-	2.4.1.52	GT4	M	ko:K00712	-	ko00000,ko01000,ko01003	Glycosyl transferases group 1
LIMCCEJA_02703	0.0	tagE	2.4.1.52	GT4	M	ko:K00712	-	ko00000,ko01000,ko01003	An N-acetylglucosaminyl transferase that is part of the accessory SecA2 SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon
LIMCCEJA_02704	2.3e-293	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2325)
LIMCCEJA_02705	5.02e-298	patB	4.4.1.8	-	E	ko:K14155	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko01000,ko01007	Aminotransferase, class I
LIMCCEJA_02706	3.42e-258	-	3.4.11.9	-	E	ko:K01262	-	ko00000,ko01000,ko01002	Creatinase/Prolidase N-terminal domain
LIMCCEJA_02707	0.0	-	-	-	U	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
LIMCCEJA_02708	2.02e-78	-	2.7.1.196, 2.7.1.205	-	G	ko:K02760	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
LIMCCEJA_02709	2.26e-65	-	2.7.1.196, 2.7.1.205	-	G	ko:K02759	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIA subunit
LIMCCEJA_02710	5.19e-251	-	-	-	E	-	-	-	M42 glutamyl aminopeptidase
LIMCCEJA_02711	0.0	-	-	-	GKT	ko:K03491	-	ko00000,ko03000	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
LIMCCEJA_02712	4.93e-303	pepT	3.4.11.4	-	E	ko:K01258	-	ko00000,ko01000,ko01002	Cleaves the N-terminal amino acid of tripeptides
LIMCCEJA_02713	0.0	oppA	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
LIMCCEJA_02714	6.96e-158	-	-	-	S	ko:K03824	-	ko00000,ko01000	Acetyltransferase (GNAT) family
LIMCCEJA_02716	0.0	nisT	-	-	V	ko:K06147,ko:K20485	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko02000	ABC transporter
LIMCCEJA_02717	1.12e-123	-	-	-	S	ko:K16925	-	ko00000,ko00002,ko02000	ABC-type cobalt transport system, permease component
LIMCCEJA_02718	2.41e-314	-	-	-	P	ko:K16786,ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter
LIMCCEJA_02719	5.88e-146	ykoC	-	-	P	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	cobalt transport
LIMCCEJA_02720	5.67e-165	tenA	3.5.99.2	-	K	ko:K03707	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000,ko03000	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
LIMCCEJA_02721	2.96e-106	thiW	-	-	S	-	-	-	Thiamine-precursor transporter protein (ThiW)
LIMCCEJA_02722	3.99e-194	thiM	2.7.1.50	-	H	ko:K00878	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
LIMCCEJA_02723	1.43e-134	thiE	2.5.1.3	-	H	ko:K00788	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)
LIMCCEJA_02724	1.98e-196	thiD	2.7.1.49, 2.7.4.7	-	H	ko:K00941	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Phosphomethylpyrimidine kinase
LIMCCEJA_02725	0.0	-	-	-	E	-	-	-	Amino acid permease
LIMCCEJA_02726	5.98e-242	rbsR	-	-	K	ko:K02529	-	ko00000,ko03000	Periplasmic binding proteins and sugar binding domain of LacI family
LIMCCEJA_02727	1.39e-07	rbsB	-	-	G	ko:K10439	ko02010,ko02030,map02010,map02030	ko00000,ko00001,ko00002,ko02000	Periplasmic binding protein domain
LIMCCEJA_02728	2.08e-213	rbsK	2.7.1.15	-	H	ko:K00852	ko00030,map00030	ko00000,ko00001,ko01000	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LIMCCEJA_02729	2.42e-60	-	-	-	K	-	-	-	DNA-binding helix-turn-helix protein
LIMCCEJA_02730	4.98e-49	-	-	-	-	-	-	-	-
LIMCCEJA_02735	5.72e-199	-	-	-	S	-	-	-	Protein of unknown function (DUF2785)
LIMCCEJA_02736	1.67e-66	-	-	-	-	-	-	-	-
LIMCCEJA_02737	0.0	pbpC	-	-	M	ko:K21467	-	ko00000,ko01011	NTF2-like N-terminal transpeptidase domain
LIMCCEJA_02739	1.06e-08	-	-	-	K	-	-	-	Helix-turn-helix domain
LIMCCEJA_02740	3.38e-308	-	-	-	EGP	-	-	-	Major Facilitator
LIMCCEJA_02741	1.27e-94	-	-	-	K	-	-	-	helix_turn_helix multiple antibiotic resistance protein
LIMCCEJA_02742	6.08e-136	-	-	-	-	-	-	-	-
LIMCCEJA_02743	8.52e-41	-	-	-	-	-	-	-	-
LIMCCEJA_02744	1.71e-53	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
LIMCCEJA_02745	1.11e-74	-	-	-	-	-	-	-	-
LIMCCEJA_02746	3.86e-107	-	-	-	-	-	-	-	-
LIMCCEJA_02747	0.0	-	-	-	K	ko:K02538	-	ko00000,ko03000	PRD domain
LIMCCEJA_02748	2.48e-91	-	-	-	G	ko:K02806	ko02060,map02060	ko00000,ko00001,ko01000,ko02000	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
LIMCCEJA_02749	8.5e-100	-	2.7.1.202	-	G	ko:K02768	ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
LIMCCEJA_02750	5.34e-64	-	2.7.1.202	-	G	ko:K02769	ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
LIMCCEJA_02751	3.36e-202	-	-	-	G	ko:K02770	ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko02000	Phosphotransferase System
LIMCCEJA_02752	7.16e-155	tal	2.2.1.2	-	F	ko:K00616	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
LIMCCEJA_02753	2.23e-166	alsE	-	-	G	ko:K17195	ko00051,ko01120,map00051,map01120	ko00000,ko00001,ko01000	Ribulose-phosphate 3 epimerase family
LIMCCEJA_02754	8.85e-102	-	2.7.1.194	-	G	ko:K02821	ko00053,ko01100,ko01120,ko02060,map00053,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
LIMCCEJA_02755	1.2e-59	ulaB	2.7.1.194	-	G	ko:K02822	ko00053,ko01100,ko01120,ko02060,map00053,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphotransferase system galactitol-specific IIB component
LIMCCEJA_02756	1.84e-212	ulaA	-	-	S	ko:K03475	ko00053,ko01100,ko01120,ko02060,map00053,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko02000	PTS system sugar-specific permease component
LIMCCEJA_02757	8.16e-206	tktN	2.2.1.1	-	G	ko:K00615	ko00030,ko00710,ko01051,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01051,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Transketolase, thiamine diphosphate binding domain
LIMCCEJA_02758	9.56e-243	tktC	2.2.1.1	-	G	ko:K00615	ko00030,ko00710,ko01051,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01051,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Transketolase
LIMCCEJA_02759	8.9e-214	scrK	2.7.1.4	-	GK	ko:K00847	ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100	ko00000,ko00001,ko01000	ROK family
LIMCCEJA_02760	5.18e-172	-	-	-	K	ko:K02530	-	ko00000,ko03000	DeoR C terminal sensor domain
LIMCCEJA_02761	6.85e-103	-	2.7.1.202	-	GT	ko:K02768	ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
LIMCCEJA_02762	2.31e-69	-	2.7.1.202	-	G	ko:K02769	ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
LIMCCEJA_02763	7.64e-223	-	-	-	G	ko:K02770	ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko02000	Phosphotransferase System
LIMCCEJA_02764	1.86e-188	-	4.1.2.13	-	G	ko:K01624	ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Fructose-bisphosphate aldolase class-II
LIMCCEJA_02765	2.66e-217	-	4.1.2.13	-	G	ko:K01624	ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Fructose-bisphosphate aldolase class-II
LIMCCEJA_02766	4.83e-108	-	2.7.1.191	-	G	ko:K02794	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system sorbose subfamily IIB component
LIMCCEJA_02767	2.58e-93	-	2.7.1.191	-	G	ko:K02793	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system fructose IIA component
LIMCCEJA_02768	0.0	-	-	-	G	-	-	-	PTS system sorbose-specific iic component
LIMCCEJA_02769	1.74e-162	tal	2.2.1.2	-	H	ko:K00616	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Transaldolase/Fructose-6-phosphate aldolase
LIMCCEJA_02770	3.05e-237	-	-	-	K	ko:K02529	-	ko00000,ko03000	helix_turn _helix lactose operon repressor
LIMCCEJA_02771	1.37e-218	-	-	-	P	-	-	-	YhfZ C-terminal domain
LIMCCEJA_02773	1.01e-75	-	-	-	S	-	-	-	Protein of unknown function DUF2620
LIMCCEJA_02774	5.79e-275	-	-	-	S	-	-	-	Protein of unknown function
LIMCCEJA_02775	7.89e-213	php	-	-	S	ko:K07048	-	ko00000	Phosphotriesterase family
LIMCCEJA_02776	2.17e-264	-	-	-	E	-	-	-	Cys/Met metabolism PLP-dependent enzyme
LIMCCEJA_02777	6.68e-283	-	-	-	E	-	-	-	Alanine racemase, N-terminal domain
LIMCCEJA_02778	2.84e-305	-	-	-	G	-	-	-	Metalloenzyme superfamily
LIMCCEJA_02779	4.54e-204	XK27_10120	-	-	K	-	-	-	S-adenosyl-l-methionine hydroxide adenosyltransferase
LIMCCEJA_02780	1.43e-125	-	-	-	S	ko:K16924	-	ko00000,ko00002,ko02000	UPF0397 protein
LIMCCEJA_02781	0.0	-	-	-	P	ko:K16786,ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATP-binding cassette cobalt transporter
LIMCCEJA_02782	8.04e-192	cbiQ	-	-	P	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	cobalt transport
LIMCCEJA_02784	3.38e-274	menC	4.2.1.113	-	H	ko:K02549	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB)
LIMCCEJA_02785	0.0	nagZ	3.2.1.52	-	G	ko:K01207	ko00520,ko00531,ko01100,ko01501,map00520,map00531,map01100,map01501	ko00000,ko00001,ko00002,ko01000	Glycosyl hydrolase family 3 N terminal domain
LIMCCEJA_02786	1.82e-227	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
LIMCCEJA_02788	1.14e-148	pinR1	-	-	L	-	-	-	Helix-turn-helix domain of Hin and related proteins, a family of DNA-binding domains unique to bacteria and represented by the Hin protein of Salmonella. The basic HTH domain is a simple fold comprised of three core helices that form a right-handed
LIMCCEJA_02789	3.83e-61	-	-	-	L	-	-	-	BRCA1 C Terminus (BRCT) domain
LIMCCEJA_02790	6.86e-114	-	-	-	-	-	-	-	-
LIMCCEJA_02791	7.64e-88	-	-	-	S	ko:K07006	-	ko00000	Pyridoxamine 5'-phosphate oxidase
LIMCCEJA_02792	3.57e-260	-	3.4.22.70	-	M	ko:K07284	-	ko00000,ko01000,ko01002,ko01011	Sortase family
LIMCCEJA_02793	5.29e-238	-	-	-	M	-	-	-	LPXTG cell wall anchor motif
LIMCCEJA_02794	5.62e-166	-	-	-	M	-	-	-	domain protein
LIMCCEJA_02795	0.0	yvcC	-	-	M	-	-	-	Cna protein B-type domain
LIMCCEJA_02796	7.69e-134	-	-	-	-	-	-	-	-
LIMCCEJA_02797	8.95e-140	-	-	-	N	ko:K09384	-	ko00000	Uncharacterized conserved protein (DUF2075)
LIMCCEJA_02798	1.07e-61	holB	2.7.7.7	-	L	ko:K02341,ko:K02343,ko:K09384	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	replication factor c
LIMCCEJA_02799	0.0	-	-	-	L	-	-	-	UvrD/REP helicase N-terminal domain
LIMCCEJA_02800	0.0	-	-	-	L	ko:K07459	-	ko00000	AAA ATPase domain
LIMCCEJA_02801	1.75e-52	-	-	-	L	ko:K07483	-	ko00000	Transposase and inactivated derivatives
LIMCCEJA_02802	5.27e-191	is18	-	-	L	-	-	-	Integrase core domain
LIMCCEJA_02803	1.16e-208	-	-	-	L	ko:K07497	-	ko00000	PFAM Integrase catalytic region
LIMCCEJA_02804	1.77e-56	-	-	-	-	-	-	-	-
LIMCCEJA_02805	0.0	pacL	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	P-type ATPase
LIMCCEJA_02806	1.4e-162	tnp1216	-	-	L	ko:K07498	-	ko00000	DDE domain
LIMCCEJA_02807	0.0	eriC	-	-	P	ko:K03281	-	ko00000	chloride
LIMCCEJA_02808	2.8e-228	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
LIMCCEJA_02809	2.97e-286	-	-	-	G	-	-	-	Major Facilitator Superfamily