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ORF_ID	e_value	Gene_name	EC_number	CAZy	COGs	KEGG_ko	KEGG_Pathway	BRITE	Description
LMDHPJAF_00001	6.85e-310	cycA	-	-	E	ko:K03293,ko:K11737	-	ko00000,ko02000	Amino acid permease
LMDHPJAF_00002	0.0	adhE	1.1.1.1, 1.2.1.10	-	C	ko:K04072	ko00010,ko00071,ko00350,ko00620,ko00625,ko00626,ko00650,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00620,map00625,map00626,map00650,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	belongs to the iron- containing alcohol dehydrogenase family
LMDHPJAF_00003	3.79e-85	-	-	-	-	-	-	-	-
LMDHPJAF_00004	4.94e-131	-	4.1.1.44	-	S	ko:K01607	ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220	ko00000,ko00001,ko01000	Carboxymuconolactone decarboxylase family
LMDHPJAF_00005	0.0	-	-	-	S	-	-	-	TerB-C domain
LMDHPJAF_00006	0.0	-	-	-	P	-	-	-	P-loop Domain of unknown function (DUF2791)
LMDHPJAF_00007	0.0	-	-	-	L	ko:K03724	-	ko00000,ko01000,ko03400	DEAD DEAH box helicase
LMDHPJAF_00008	7.28e-243	galE	5.1.3.2	-	M	ko:K01784	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the NAD(P)-dependent epimerase dehydratase family
LMDHPJAF_00009	3.78e-47	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2263)
LMDHPJAF_00010	2.24e-79	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
LMDHPJAF_00011	1.17e-173	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
LMDHPJAF_00012	8.5e-256	-	-	-	V	-	-	-	MatE
LMDHPJAF_00013	1.48e-07	-	-	-	GK	-	-	-	ROK family
LMDHPJAF_00014	2.81e-149	-	-	-	GK	-	-	-	ROK family
LMDHPJAF_00015	2.8e-43	-	-	-	K	-	-	-	helix_turn_helix, arabinose operon control protein
LMDHPJAF_00016	9.62e-143	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
LMDHPJAF_00017	9.55e-22	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2263)
LMDHPJAF_00018	1.16e-43	-	1.8.1.7	-	C	ko:K00383,ko:K21739	ko00480,ko04918,map00480,map04918	ko00000,ko00001,ko01000	Pyridine nucleotide-disulfide oxidoreductase
LMDHPJAF_00019	6.01e-245	-	1.8.1.7	-	C	ko:K00383,ko:K21739	ko00480,ko04918,map00480,map04918	ko00000,ko00001,ko01000	Pyridine nucleotide-disulfide oxidoreductase
LMDHPJAF_00020	2.44e-207	yvgN	-	-	C	-	-	-	Aldo keto reductase
LMDHPJAF_00022	3.71e-117	-	-	-	K	-	-	-	acetyltransferase
LMDHPJAF_00023	6.95e-76	psiE	-	-	S	ko:K13256	-	ko00000	Phosphate-starvation-inducible E
LMDHPJAF_00024	9.11e-38	-	-	-	S	-	-	-	Putative ABC-transporter type IV
LMDHPJAF_00025	2.87e-92	-	-	-	S	-	-	-	Putative ABC-transporter type IV
LMDHPJAF_00026	4.1e-161	-	-	-	M	-	-	-	LysM domain protein
LMDHPJAF_00027	3.67e-163	-	-	-	M	-	-	-	LysM domain protein
LMDHPJAF_00029	3.27e-27	-	-	-	S	-	-	-	Bacterial protein of unknown function (DUF898)
LMDHPJAF_00030	3.29e-216	XK27_10475	-	-	S	-	-	-	Oxidoreductase family, NAD-binding Rossmann fold
LMDHPJAF_00031	1.89e-74	rpiA1	5.3.1.6	-	G	ko:K01807	ko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
LMDHPJAF_00032	4.08e-148	-	-	-	K	-	-	-	SIS domain
LMDHPJAF_00033	1.41e-210	-	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	lactate/malate dehydrogenase, alpha/beta C-terminal domain
LMDHPJAF_00036	1.63e-67	XK27_05625	-	-	P	-	-	-	Rhodanese Homology Domain
LMDHPJAF_00037	7.17e-242	-	-	-	-	-	-	-	-
LMDHPJAF_00038	7.37e-158	gntR1	-	-	K	ko:K03710	-	ko00000,ko03000	UTRA
LMDHPJAF_00039	1.44e-90	tagD	2.7.7.39	-	IM	ko:K00980	ko00564,map00564	ko00000,ko00001,ko01000	Glycerol-3-phosphate cytidylyltransferase
LMDHPJAF_00040	8.97e-170	tagA	2.4.1.187	GT26	F	ko:K05946	ko05111,map05111	ko00000,ko00001,ko01000,ko01003	Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
LMDHPJAF_00041	2.5e-257	-	-	-	M	-	-	-	Glycosyl transferases group 1
LMDHPJAF_00042	0.0	-	-	-	S	-	-	-	Glycosyltransferase like family 2
LMDHPJAF_00043	0.0	pncB	6.3.4.21	-	F	ko:K00763	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
LMDHPJAF_00044	1.76e-196	nadE	6.3.1.5	-	F	ko:K01916	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
LMDHPJAF_00045	0.0	spoVK	-	-	O	-	-	-	ATPase family associated with various cellular activities (AAA)
LMDHPJAF_00046	0.0	pacL	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	P-type ATPase
LMDHPJAF_00047	2.41e-281	-	-	-	M	-	-	-	CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
LMDHPJAF_00048	0.0	epsU	-	-	S	ko:K03328	-	ko00000	Polysaccharide biosynthesis protein
LMDHPJAF_00049	2.71e-169	-	-	-	M	-	-	-	Glycosyltransferase sugar-binding region containing DXD motif
LMDHPJAF_00050	1.52e-108	ydcK	-	-	S	ko:K03095	-	ko00000	Belongs to the SprT family
LMDHPJAF_00052	2.39e-131	-	-	-	S	-	-	-	ECF transporter, substrate-specific component
LMDHPJAF_00053	1.11e-142	acmA	3.2.1.17, 3.2.1.96	-	NU	ko:K01185,ko:K01227	ko00511,map00511	ko00000,ko00001,ko01000	mannosyl-glycoprotein
LMDHPJAF_00054	0.0	pcrA	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	ATP-dependent DNA helicase
LMDHPJAF_00055	0.0	ligA	6.5.1.2	-	L	ko:K01972	ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430	ko00000,ko00001,ko01000,ko03032,ko03400	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
LMDHPJAF_00056	1.12e-264	camS	-	-	S	-	-	-	sex pheromone
LMDHPJAF_00057	2.23e-65	gatC	6.3.5.6, 6.3.5.7	-	J	ko:K02435	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
LMDHPJAF_00058	0.0	gatA	6.3.5.6, 6.3.5.7	-	J	ko:K02433	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
LMDHPJAF_00059	0.0	gatB	6.3.5.6, 6.3.5.7	-	J	ko:K02434	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
LMDHPJAF_00060	1.21e-211	dagK	2.7.1.107	-	G	ko:K07029	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko01000	Lipid kinase
LMDHPJAF_00062	5.66e-190	-	-	-	S	-	-	-	hydrolase
LMDHPJAF_00063	6.84e-144	-	-	-	M	-	-	-	family 8
LMDHPJAF_00064	1.32e-148	ybhL	-	-	S	ko:K06890	-	ko00000	Belongs to the BI1 family
LMDHPJAF_00065	4.24e-183	cbiQ	-	-	P	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	cobalt transport
LMDHPJAF_00066	0.0	ykoD	-	-	P	ko:K16786,ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
LMDHPJAF_00067	5.17e-123	-	-	-	S	ko:K16924	-	ko00000,ko00002,ko02000	UPF0397 protein
LMDHPJAF_00068	7.17e-144	XK27_10120	-	-	K	-	-	-	S-adenosyl-l-methionine hydroxide adenosyltransferase
LMDHPJAF_00069	8.77e-13	XK27_10120	-	-	K	-	-	-	S-adenosyl-l-methionine hydroxide adenosyltransferase
LMDHPJAF_00070	2.47e-308	nhaC	-	-	C	ko:K03315	-	ko00000,ko02000	Na H antiporter NhaC
LMDHPJAF_00071	9.01e-164	spaF	-	-	V	ko:K01990,ko:K20490	ko02010,ko02020,ko02024,map02010,map02020,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, ATP-binding protein
LMDHPJAF_00072	4.28e-154	-	-	-	S	ko:K01992,ko:K20491	ko02010,ko02020,ko02024,map02010,map02020,map02024	ko00000,ko00001,ko00002,ko02000	ABC-2 family transporter protein
LMDHPJAF_00073	0.0	rumA_2	2.1.1.190	-	J	ko:K03215	-	ko00000,ko01000,ko03009	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
LMDHPJAF_00074	0.0	cadA	3.6.3.3, 3.6.3.5	-	P	ko:K01534	-	ko00000,ko01000	E1-E2 ATPase
LMDHPJAF_00075	1.58e-45	-	-	-	C	-	-	-	Heavy-metal-associated domain
LMDHPJAF_00076	3.02e-122	dpsB	-	-	P	-	-	-	Belongs to the Dps family
LMDHPJAF_00077	5.63e-145	fnr	-	-	K	ko:K21562	-	ko00000,ko03000	Transcriptional regulator, Crp Fnr family
LMDHPJAF_00080	1.65e-241	flp	-	-	V	-	-	-	Beta-lactamase
LMDHPJAF_00081	5.83e-178	-	2.7.1.95	-	F	ko:K00897	-	ko00000,ko01000,ko01504	Belongs to the aminoglycoside phosphotransferase family
LMDHPJAF_00082	3.38e-15	-	-	-	F	-	-	-	adenylate kinase activity
LMDHPJAF_00084	2.52e-203	rluA	5.4.99.23, 5.4.99.28, 5.4.99.29	-	J	ko:K06177,ko:K06180	-	ko00000,ko01000,ko03009,ko03016	Responsible for synthesis of pseudouridine from uracil
LMDHPJAF_00085	0.0	pbp2A	2.4.1.129, 3.4.16.4	GT51	M	ko:K12555	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01003,ko01011	penicillin-binding protein
LMDHPJAF_00086	7.46e-72	yheA	-	-	S	-	-	-	Belongs to the UPF0342 family
LMDHPJAF_00087	7.08e-273	yhaO	-	-	L	ko:K03547	-	ko00000,ko03400	Ser Thr phosphatase family protein
LMDHPJAF_00088	0.0	yhaN	-	-	L	-	-	-	AAA domain
LMDHPJAF_00089	6.91e-234	yhaM	-	-	S	ko:K03698	-	ko00000,ko01000,ko03019	Metal dependent phosphohydrolases with conserved 'HD' motif.
LMDHPJAF_00090	1.44e-201	prsA	5.2.1.8	-	M	ko:K07533	-	ko00000,ko01000,ko03110	Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
LMDHPJAF_00091	4.19e-48	-	-	-	S	-	-	-	YtxH-like protein
LMDHPJAF_00092	3.47e-83	-	-	-	-	-	-	-	-
LMDHPJAF_00093	2.38e-99	hit	-	-	FG	ko:K02503	-	ko00000,ko04147	Scavenger mRNA decapping enzyme C-term binding
LMDHPJAF_00094	1.89e-172	ecsA	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
LMDHPJAF_00095	4.53e-283	ecsB	-	-	U	ko:K01992	-	ko00000,ko00002,ko02000	ABC transporter
LMDHPJAF_00096	1.03e-161	trmB	2.1.1.33	-	J	ko:K03439	-	ko00000,ko01000,ko03016	Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
LMDHPJAF_00097	2.79e-17	-	-	-	-	-	-	-	-
LMDHPJAF_00098	2.25e-70	ytpP	-	-	CO	-	-	-	Thioredoxin
LMDHPJAF_00099	2.07e-155	XK27_10290	-	-	J	ko:K06878	-	ko00000	Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
LMDHPJAF_00100	2.03e-144	cutC	-	-	P	ko:K06201	-	ko00000	Participates in the control of copper homeostasis
LMDHPJAF_00101	0.0	murC	6.3.2.8	-	M	ko:K01924	ko00471,ko00550,ko01100,map00471,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Belongs to the MurCDEF family
LMDHPJAF_00102	1.03e-150	frlR1	-	-	K	ko:K03710,ko:K10711	-	ko00000,ko03000	UTRA
LMDHPJAF_00103	2.91e-166	deoC	4.1.2.4	-	F	ko:K01619	ko00030,map00030	ko00000,ko00001,ko01000	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
LMDHPJAF_00104	2.49e-294	-	-	-	G	ko:K02027	-	ko00000,ko00002,ko02000	Bacterial extracellular solute-binding protein
LMDHPJAF_00105	1.05e-148	vraR	-	-	K	ko:K07694,ko:K11618	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	helix_turn_helix, Lux Regulon
LMDHPJAF_00106	1.07e-283	degS	2.7.13.3	-	F	ko:K07683,ko:K07777	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Sensor histidine kinase
LMDHPJAF_00107	1.45e-212	rbsB	-	-	G	ko:K10439	ko02010,ko02030,map02010,map02030	ko00000,ko00001,ko00002,ko02000	Periplasmic binding protein domain
LMDHPJAF_00108	9.59e-96	-	-	-	G	ko:K02744	ko00052,ko02060,map00052,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system fructose IIA component
LMDHPJAF_00109	1.79e-121	levB	2.7.1.191	-	G	ko:K02794	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system sorbose subfamily IIB component
LMDHPJAF_00110	1.07e-183	levC	-	-	M	ko:K02795	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	PTS system sorbose-specific iic component
LMDHPJAF_00111	8.04e-193	levD	-	-	G	ko:K02771	ko00051,ko02060,map00051,map02060	ko00000,ko00001,ko00002,ko02000	PTS system mannose/fructose/sorbose family IID component
LMDHPJAF_00112	6.1e-64	-	-	-	-	-	-	-	-
LMDHPJAF_00113	0.0	polA	2.7.7.7	-	L	ko:K02335	ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440	ko00000,ko00001,ko01000,ko03032,ko03400	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
LMDHPJAF_00114	4.88e-198	fpg	3.2.2.23, 4.2.99.18	-	L	ko:K10563	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
LMDHPJAF_00115	2.72e-129	coaE	2.7.1.24	-	F	ko:K00859	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
LMDHPJAF_00116	8.41e-107	nrdR	-	-	K	ko:K07738	-	ko00000,ko03000	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
LMDHPJAF_00117	1.68e-309	dnaB2	-	-	L	ko:K03346	-	ko00000,ko03032	Replication initiation and membrane attachment
LMDHPJAF_00118	2.41e-205	dnaI	-	-	L	ko:K11144	-	ko00000,ko03032	Primosomal protein DnaI
LMDHPJAF_00119	0.0	thrS	6.1.1.3	-	J	ko:K01868	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
LMDHPJAF_00120	7.68e-71	-	-	-	K	-	-	-	LytTr DNA-binding domain
LMDHPJAF_00121	3.19e-41	-	-	-	S	-	-	-	Protein of unknown function (DUF3021)
LMDHPJAF_00122	1.29e-112	infC	-	-	J	ko:K02520	-	ko00000,ko03012,ko03029	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
LMDHPJAF_00123	9.64e-38	rpmI	-	-	J	ko:K02916	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL35 family
LMDHPJAF_00124	3.54e-75	rplT	-	-	J	ko:K02887	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
LMDHPJAF_00125	2.37e-162	add	3.5.4.2, 3.5.4.4	-	F	ko:K01488,ko:K02029,ko:K21053	ko00230,ko01100,ko05340,map00230,map01100,map05340	ko00000,ko00001,ko00002,ko01000,ko02000	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
LMDHPJAF_00126	1.57e-113	yqeG	-	-	S	ko:K07015	-	ko00000	HAD phosphatase, family IIIA
LMDHPJAF_00127	4.57e-268	yqeH	-	-	S	ko:K06948	-	ko00000,ko03009	Ribosome biogenesis GTPase YqeH
LMDHPJAF_00128	2.52e-148	nadD	2.7.7.18	-	H	ko:K00969	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
LMDHPJAF_00129	9.96e-141	yqeK	-	-	H	-	-	-	Hydrolase, HD family
LMDHPJAF_00130	4.36e-78	rsfS	-	-	J	ko:K09710	-	ko00000,ko03009	Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
LMDHPJAF_00131	5.19e-273	ylbM	-	-	S	-	-	-	Belongs to the UPF0348 family
LMDHPJAF_00132	4.1e-118	ylbN	-	-	S	ko:K07040	-	ko00000	Uncharacterized ACR, COG1399
LMDHPJAF_00133	2.55e-168	csrR	-	-	K	-	-	-	response regulator
LMDHPJAF_00134	0.0	arlS	2.7.13.3	-	T	ko:K18940	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
LMDHPJAF_00135	4.41e-206	yidC	-	-	U	ko:K03217	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044,ko03029	Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
LMDHPJAF_00136	5.78e-57	acyP	3.6.1.7	-	C	ko:K01512	ko00620,ko00627,ko01120,map00620,map00627,map01120	ko00000,ko00001,ko01000	Belongs to the acylphosphatase family
LMDHPJAF_00137	8.29e-174	spoU	-	-	J	ko:K03437	-	ko00000,ko03016	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
LMDHPJAF_00138	1.19e-82	yodB	-	-	K	-	-	-	Transcriptional regulator, HxlR family
LMDHPJAF_00139	1.29e-257	pheS	6.1.1.20	-	J	ko:K01889	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
LMDHPJAF_00140	0.0	pheT	6.1.1.20	-	J	ko:K01890	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
LMDHPJAF_00141	1.19e-256	mltG	-	-	S	ko:K07082	-	ko00000	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
LMDHPJAF_00142	7.59e-97	greA	-	-	K	ko:K03624	-	ko00000,ko03021	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
LMDHPJAF_00143	0.0	-	-	-	S	-	-	-	membrane
LMDHPJAF_00144	0.0	pbp2b	-	-	M	ko:K00687,ko:K12553,ko:K21465,ko:K21466	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01011	Penicillin-binding Protein
LMDHPJAF_00145	3.09e-29	rpmG	-	-	J	ko:K02913	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL33 family
LMDHPJAF_00146	4.25e-122	fthC	6.3.3.2	-	H	ko:K01934	ko00670,ko01100,map00670,map01100	ko00000,ko00001,ko01000	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
LMDHPJAF_00147	1.93e-146	gluP	3.4.21.105	-	S	ko:K19225	-	ko00000,ko01000,ko01002	Rhomboid family
LMDHPJAF_00148	3.31e-47	yqgQ	-	-	S	-	-	-	Bacterial protein of unknown function (DUF910)
LMDHPJAF_00149	2.44e-75	yqhL	-	-	P	-	-	-	Rhodanese-like protein
LMDHPJAF_00150	1.18e-26	-	-	-	S	-	-	-	Protein of unknown function (DUF3042)
LMDHPJAF_00151	5.99e-214	miaA	2.5.1.75	-	F	ko:K00791	ko00908,ko01100,ko01110,map00908,map01100,map01110	ko00000,ko00001,ko01000,ko01006,ko03016	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
LMDHPJAF_00152	0.0	glnA	6.3.1.2	-	E	ko:K01915	ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727	ko00000,ko00001,ko01000,ko04147	glutamine synthetase
LMDHPJAF_00153	5.23e-259	-	-	-	EGP	-	-	-	Major Facilitator Superfamily
LMDHPJAF_00154	1.91e-192	supH	-	-	S	-	-	-	haloacid dehalogenase-like hydrolase
LMDHPJAF_00156	2.13e-227	ybcH	-	-	D	ko:K06889	-	ko00000	Alpha beta
LMDHPJAF_00157	1.13e-273	atoB	1.1.1.88, 2.3.1.9	-	I	ko:K00054,ko:K00626	ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the thiolase family
LMDHPJAF_00158	7.42e-277	mvaA	1.1.1.88, 2.3.1.9	-	C	ko:K00054,ko:K00626	ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the HMG-CoA reductase family
LMDHPJAF_00159	3.82e-276	mvaS	2.3.3.10	-	I	ko:K01641	ko00072,ko00280,ko00650,ko00900,ko01100,ko01110,ko01130,map00072,map00280,map00650,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Hydroxymethylglutaryl-CoA synthase
LMDHPJAF_00160	0.0	rumA_1	2.1.1.190, 2.1.1.35	-	J	ko:K00557,ko:K03215	-	ko00000,ko01000,ko03009,ko03016	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
LMDHPJAF_00161	4.28e-185	recX	-	-	S	ko:K03565	-	ko00000,ko03400	Regulatory protein RecX
LMDHPJAF_00162	1.6e-145	ygaC	-	-	J	ko:K07586	-	ko00000	Belongs to the UPF0374 family
LMDHPJAF_00163	8.88e-112	-	-	-	-	-	-	-	-
LMDHPJAF_00164	4.87e-101	-	-	-	-	-	-	-	-
LMDHPJAF_00165	3.17e-200	hlyX	-	-	S	ko:K03699	-	ko00000,ko02042	Transporter associated domain
LMDHPJAF_00166	0.0	prfC	-	-	J	ko:K02837	-	ko00000,ko03012	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
LMDHPJAF_00167	2.17e-59	XK27_09445	-	-	S	-	-	-	Domain of unknown function (DUF1827)
LMDHPJAF_00168	0.0	clpE	-	-	O	ko:K03697	-	ko00000,ko03110	Belongs to the ClpA ClpB family
LMDHPJAF_00169	1.02e-34	-	-	-	-	-	-	-	-
LMDHPJAF_00170	7.45e-54	ptsH	-	-	G	ko:K11189	-	ko00000,ko02000	phosphocarrier protein HPR
LMDHPJAF_00171	0.0	ptsI	2.7.3.9	-	G	ko:K08483	ko02060,map02060	ko00000,ko00001,ko01000,ko02000	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
LMDHPJAF_00172	1.17e-87	spxA	-	-	K	ko:K16509	-	ko00000	Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
LMDHPJAF_00173	2.32e-153	mecA	-	-	NOT	ko:K16511	-	ko00000	Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
LMDHPJAF_00174	3.85e-203	coiA	-	-	S	ko:K06198	-	ko00000	Competence protein
LMDHPJAF_00175	3.34e-134	yjbH	-	-	Q	-	-	-	Thioredoxin
LMDHPJAF_00176	4.67e-139	-	-	-	S	-	-	-	CYTH
LMDHPJAF_00177	1.7e-146	yjbM	2.7.6.5	-	S	ko:K07816	ko00230,map00230	ko00000,ko00001,ko01000	RelA SpoT domain protein
LMDHPJAF_00178	8.09e-194	nadK	2.7.1.23	-	F	ko:K00858	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
LMDHPJAF_00179	8.54e-215	rluD2	5.4.99.23	-	J	ko:K06180	-	ko00000,ko01000,ko03009	Responsible for synthesis of pseudouridine from uracil
LMDHPJAF_00180	0.0	mycA	4.2.1.53	-	S	ko:K10254	-	ko00000,ko01000	Myosin-crossreactive antigen
LMDHPJAF_00181	1.39e-296	-	-	-	N	ko:K09384	-	ko00000	Uncharacterized conserved protein (DUF2075)
LMDHPJAF_00182	1.01e-254	pgl	3.1.1.31	-	G	ko:K07404	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Lactonase, 7-bladed beta-propeller
LMDHPJAF_00183	3.05e-82	srlB	2.7.1.198	-	G	ko:K02781	ko00051,ko02060,map00051,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system glucitol/sorbitol-specific IIA component
LMDHPJAF_00184	1.06e-261	XK27_05220	-	-	S	-	-	-	AI-2E family transporter
LMDHPJAF_00185	8e-136	cspR	2.1.1.207	-	J	ko:K03216	-	ko00000,ko01000,ko03016	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
LMDHPJAF_00186	9.31e-97	-	-	-	S	-	-	-	Protein of unknown function (DUF1149)
LMDHPJAF_00187	0.0	ftsK	-	-	D	ko:K03466	-	ko00000,ko03036	Belongs to the FtsK SpoIIIE SftA family
LMDHPJAF_00188	7.59e-287	ymfF	-	-	S	-	-	-	Peptidase M16 inactive domain protein
LMDHPJAF_00189	4.09e-290	ymfH	-	-	S	-	-	-	Peptidase M16
LMDHPJAF_00190	5.82e-164	fabG	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Enoyl-(Acyl carrier protein) reductase
LMDHPJAF_00191	2.31e-175	ymfM	-	-	S	ko:K15539	-	ko00000	Helix-turn-helix domain
LMDHPJAF_00192	3.1e-125	pgsA	2.7.8.5	-	I	ko:K00995	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
LMDHPJAF_00193	2.77e-247	recA	-	-	L	ko:K03553	ko03440,map03440	ko00000,ko00001,ko00002,ko03400	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
LMDHPJAF_00194	0.0	rny	-	-	S	ko:K18682	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	Endoribonuclease that initiates mRNA decay
LMDHPJAF_00195	2.72e-261	tagO	2.7.8.33, 2.7.8.35	-	M	ko:K02851	-	ko00000,ko01000,ko01003,ko01005	transferase
LMDHPJAF_00196	1.9e-154	yvyE	3.4.13.9	-	S	ko:K01271	-	ko00000,ko01000,ko01002	YigZ family
LMDHPJAF_00197	1.1e-279	comFA	-	-	L	ko:K02240	-	ko00000,ko00002,ko02044	Helicase C-terminal domain protein
LMDHPJAF_00198	6.9e-158	comFC	-	-	S	ko:K02242	-	ko00000,ko00002,ko02044	Competence protein
LMDHPJAF_00199	3.97e-125	hpf	-	-	J	ko:K05808	-	ko00000,ko03009	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
LMDHPJAF_00200	0.0	secA	-	-	U	ko:K03070	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
LMDHPJAF_00201	1.19e-233	prfB	-	-	J	ko:K02836	-	ko00000,ko03012	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
LMDHPJAF_00202	7.53e-40	-	-	-	-	-	-	-	-
LMDHPJAF_00203	4.58e-220	hprK	-	-	F	ko:K06023	-	ko00000,ko01000	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
LMDHPJAF_00204	1.4e-198	lgt	-	-	M	ko:K13292	-	ko00000,ko01000	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
LMDHPJAF_00205	1.29e-236	gpsA	1.1.1.94	-	I	ko:K00057	ko00564,ko01110,map00564,map01110	ko00000,ko00001,ko01000	Glycerol-3-phosphate dehydrogenase
LMDHPJAF_00206	3.5e-220	trxB	1.8.1.9	-	C	ko:K00384	ko00450,map00450	ko00000,ko00001,ko01000	Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
LMDHPJAF_00207	3.38e-199	lacR	-	-	K	ko:K02529	-	ko00000,ko03000	Transcriptional regulator
LMDHPJAF_00208	5.58e-258	galK	2.7.1.6	-	F	ko:K00849	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
LMDHPJAF_00209	0.0	galT	2.7.7.12	-	G	ko:K00965	ko00052,ko00520,ko01100,ko04917,map00052,map00520,map01100,map04917	ko00000,ko00001,ko00002,ko01000	UDP-glucose--hexose-1-phosphate uridylyltransferase
LMDHPJAF_00210	9.9e-240	galM	5.1.3.3	-	G	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the interconversion of alpha and beta anomers of maltose
LMDHPJAF_00211	0.0	pgm	5.4.2.2	-	G	ko:K01835	ko00010,ko00030,ko00052,ko00230,ko00500,ko00520,ko00521,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00052,map00230,map00500,map00520,map00521,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
LMDHPJAF_00212	0.0	uvrB	-	-	L	ko:K03702	ko03420,map03420	ko00000,ko00001,ko03400	damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
LMDHPJAF_00213	0.0	uvrA	-	-	L	ko:K03701	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
LMDHPJAF_00214	2.04e-117	-	-	-	S	-	-	-	Short repeat of unknown function (DUF308)
LMDHPJAF_00215	3.72e-205	yvcJ	-	-	S	ko:K06958	-	ko00000,ko03019	Displays ATPase and GTPase activities
LMDHPJAF_00216	1.54e-247	yvcK	-	-	S	-	-	-	Required for morphogenesis under gluconeogenic growth conditions
LMDHPJAF_00217	2.02e-220	whiA	-	-	K	ko:K09762	-	ko00000	May be required for sporulation
LMDHPJAF_00218	3.74e-130	clpP	3.4.21.92	-	O	ko:K01358	ko04112,ko04212,map04112,map04212	ko00000,ko00001,ko01000,ko01002	Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
LMDHPJAF_00219	5.27e-173	ycaM	-	-	E	-	-	-	amino acid
LMDHPJAF_00220	9.64e-73	ycaM	-	-	E	-	-	-	amino acid
LMDHPJAF_00221	3.85e-51	ycaM	-	-	E	-	-	-	amino acid
LMDHPJAF_00223	3.72e-238	cggR	-	-	K	ko:K05311	-	ko00000,ko03000	Putative sugar-binding domain
LMDHPJAF_00224	4.74e-243	gap	1.2.1.12	-	G	ko:K00134	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
LMDHPJAF_00225	7.02e-287	pgk	2.7.2.3	-	F	ko:K00927	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the phosphoglycerate kinase family
LMDHPJAF_00226	8.39e-182	tpiA	5.3.1.1	-	G	ko:K01803	ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
LMDHPJAF_00227	1.68e-311	eno	4.2.1.11	-	G	ko:K01689	ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066	ko00000,ko00001,ko00002,ko01000,ko03019,ko04147	Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
LMDHPJAF_00228	7.52e-40	secG	-	-	U	ko:K03075	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Preprotein translocase
LMDHPJAF_00229	0.0	rnr	-	-	J	ko:K12573	ko03018,map03018	ko00000,ko00001,ko01000,ko03016,ko03019	3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
LMDHPJAF_00230	8.46e-101	smpB	-	-	J	ko:K03664	-	ko00000	the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
LMDHPJAF_00231	2.11e-133	-	-	-	K	ko:K06977	-	ko00000	acetyltransferase
LMDHPJAF_00232	1.09e-110	-	-	-	-	-	-	-	-
LMDHPJAF_00233	5.96e-122	-	-	-	-	-	-	-	-
LMDHPJAF_00234	1.09e-195	ycsE	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
LMDHPJAF_00235	3.43e-171	ung	3.2.2.27	-	L	ko:K03648	ko03410,ko05340,map03410,map05340	ko00000,ko00001,ko01000,ko03400	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
LMDHPJAF_00236	1.5e-228	pta	2.3.1.8, 3.6.3.21	-	C	ko:K00625,ko:K02028	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000,ko02000	phosphate acetyltransferase
LMDHPJAF_00237	1.75e-110	ydiB	-	-	O	ko:K06925	-	ko00000,ko03016	Hydrolase, P-loop family
LMDHPJAF_00238	9.09e-129	dnaQ	2.7.7.7	-	L	ko:K02342	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III
LMDHPJAF_00239	3.2e-211	murB	1.3.1.98	-	M	ko:K00075	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation
LMDHPJAF_00240	3.29e-258	potA	3.6.3.30, 3.6.3.31	-	P	ko:K02010,ko:K11072	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
LMDHPJAF_00241	3.57e-172	potB	-	-	P	ko:K11071	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
LMDHPJAF_00242	2.65e-176	potC	-	-	P	ko:K11070	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
LMDHPJAF_00243	4.03e-265	potD	-	-	P	ko:K11069	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
LMDHPJAF_00244	2.14e-195	dacA	2.7.7.85	-	S	ko:K18672	-	ko00000,ko01000	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
LMDHPJAF_00245	2.86e-220	ybbR	-	-	S	-	-	-	YbbR-like protein
LMDHPJAF_00246	0.0	glmM	5.4.2.10	-	G	ko:K03431	ko00520,ko01100,ko01130,map00520,map01100,map01130	ko00000,ko00001,ko01000	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
LMDHPJAF_00247	1.39e-190	-	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
LMDHPJAF_00248	3.02e-88	crcB1	-	-	U	ko:K06199	-	ko00000,ko02000	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
LMDHPJAF_00249	1.75e-80	crcB	-	-	U	ko:K06199	-	ko00000,ko02000	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
LMDHPJAF_00250	3.18e-252	-	-	-	S	-	-	-	Putative adhesin
LMDHPJAF_00251	1.4e-147	-	-	-	-	-	-	-	-
LMDHPJAF_00252	3.84e-186	-	-	-	S	-	-	-	Alpha/beta hydrolase family
LMDHPJAF_00253	4.03e-207	-	-	-	P	ko:K02077	-	ko00000,ko00002,ko02000	Belongs to the bacterial solute-binding protein 9 family
LMDHPJAF_00254	3.03e-276	coaBC	4.1.1.36, 6.3.2.5	-	H	ko:K01598,ko:K13038	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
LMDHPJAF_00255	6.21e-124	-	-	-	S	-	-	-	VanZ like family
LMDHPJAF_00256	6.1e-171	yebC	-	-	K	-	-	-	Transcriptional regulatory protein
LMDHPJAF_00257	2.04e-226	comGA	-	-	NU	ko:K02243	-	ko00000,ko00002,ko02044	Type II IV secretion system protein
LMDHPJAF_00258	8.54e-223	comGB	-	-	NU	ko:K02244	-	ko00000,ko00002,ko02044	type II secretion system
LMDHPJAF_00259	1.86e-54	comGC	-	-	U	ko:K02245,ko:K02456	ko03070,ko05111,map03070,map05111	ko00000,ko00001,ko00002,ko02044	Required for transformation and DNA binding
LMDHPJAF_00260	5.63e-77	-	-	-	-	ko:K02246	-	ko00000,ko00002,ko02044	-
LMDHPJAF_00262	2.15e-109	-	-	-	U	ko:K02248	-	ko00000,ko00002,ko02044	Putative Competence protein ComGF
LMDHPJAF_00263	5.62e-228	ytxK	2.1.1.72	-	L	ko:K00571	-	ko00000,ko01000,ko02048	N-6 DNA Methylase
LMDHPJAF_00264	5.41e-276	ackA	2.7.2.1	-	F	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
LMDHPJAF_00266	0.0	sacB	2.4.1.10, 2.4.1.9	GH68	M	ko:K00692,ko:K20811	ko00500,ko01100,ko02020,map00500,map01100,map02020	ko00000,ko00001,ko01000,ko01003	Levansucrase/Invertase
LMDHPJAF_00267	1.39e-81	-	-	-	M	-	-	-	Protein of unknown function (DUF3737)
LMDHPJAF_00268	8.76e-33	-	-	-	M	-	-	-	Protein of unknown function (DUF3737)
LMDHPJAF_00269	6.69e-211	patB	4.4.1.8	-	E	ko:K14155	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko01000,ko01007	Aminotransferase, class I
LMDHPJAF_00270	1.04e-47	patB	4.4.1.8	-	E	ko:K14155	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko01000,ko01007	Aminotransferase, class I
LMDHPJAF_00271	3.46e-241	manA	5.3.1.8	-	G	ko:K01809	ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	mannose-6-phosphate isomerase
LMDHPJAF_00272	5.41e-87	-	-	-	S	-	-	-	SdpI/YhfL protein family
LMDHPJAF_00273	4.46e-165	-	-	-	K	-	-	-	Transcriptional regulatory protein, C terminal
LMDHPJAF_00274	0.0	yclK	-	-	T	-	-	-	Histidine kinase
LMDHPJAF_00275	0.0	ltaS	2.7.8.20	-	M	ko:K19005	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
LMDHPJAF_00276	2.94e-134	vanZ	-	-	V	-	-	-	VanZ like family
LMDHPJAF_00277	0.0	pgi	5.3.1.9	-	G	ko:K01810	ko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the GPI family
LMDHPJAF_00278	1.39e-49	-	-	-	EGP	-	-	-	Major Facilitator
LMDHPJAF_00279	7.59e-106	-	-	-	EGP	-	-	-	Major Facilitator
LMDHPJAF_00280	1.46e-63	-	-	-	EGP	-	-	-	Major Facilitator
LMDHPJAF_00281	2.49e-82	-	-	-	-	-	-	-	-
LMDHPJAF_00284	5.98e-242	ampC	-	-	V	-	-	-	Beta-lactamase
LMDHPJAF_00285	0.0	murE2	6.3.2.13	-	M	ko:K01928	ko00300,ko00550,map00300,map00550	ko00000,ko00001,ko01000,ko01011	Mur ligase, middle domain
LMDHPJAF_00286	1.36e-143	tdk	2.7.1.21	-	F	ko:K00857	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	thymidine kinase
LMDHPJAF_00287	4.43e-251	prfA	-	-	J	ko:K02835	-	ko00000,ko03012	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
LMDHPJAF_00288	3.44e-200	prmC	2.1.1.297	-	J	ko:K02493	-	ko00000,ko01000,ko03012	Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
LMDHPJAF_00289	8.74e-235	ywlC	2.7.7.87	-	J	ko:K07566	-	ko00000,ko01000,ko03009,ko03016	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
LMDHPJAF_00290	7.5e-146	upp	2.4.2.9	-	F	ko:K00761	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
LMDHPJAF_00291	7.4e-165	atpB	-	-	C	ko:K02108	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko03110	it plays a direct role in the translocation of protons across the membrane
LMDHPJAF_00292	1.75e-35	atpE	-	-	C	ko:K02110	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
LMDHPJAF_00293	5.6e-79	atpF	-	-	C	ko:K02109	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
LMDHPJAF_00294	8.93e-118	atpH	-	-	C	ko:K02113	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
LMDHPJAF_00295	0.0	atpA	3.6.3.14	-	C	ko:K02111	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko01000	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
LMDHPJAF_00296	4.95e-219	atpG	-	-	C	ko:K02115	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
LMDHPJAF_00297	0.0	atpD	3.6.3.14	-	C	ko:K02112	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko01000	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
LMDHPJAF_00298	2.1e-94	atpC	-	-	C	ko:K02114	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Produces ATP from ADP in the presence of a proton gradient across the membrane
LMDHPJAF_00299	3.07e-42	-	-	-	S	-	-	-	Protein of unknown function (DUF1146)
LMDHPJAF_00300	3.53e-229	mbl	-	-	D	ko:K03569	-	ko00000,ko02048,ko03036,ko04812	Cell shape determining protein MreB Mrl
LMDHPJAF_00301	3.34e-18	-	-	-	S	-	-	-	DNA-directed RNA polymerase subunit beta
LMDHPJAF_00302	2.64e-67	ytjA	-	-	S	ko:K08998	-	ko00000	Could be involved in insertion of integral membrane proteins into the membrane
LMDHPJAF_00303	1.26e-46	-	-	-	S	-	-	-	Protein of unknown function (DUF2969)
LMDHPJAF_00304	1.07e-283	rodA	-	-	D	ko:K05837	-	ko00000,ko03036	Belongs to the SEDS family
LMDHPJAF_00305	3.52e-106	uspA	-	-	T	-	-	-	universal stress protein
LMDHPJAF_00306	9.34e-08	-	-	-	-	-	-	-	-
LMDHPJAF_00307	4.19e-300	rarA	-	-	L	ko:K07478	-	ko00000	recombination factor protein RarA
LMDHPJAF_00308	5.92e-107	-	-	-	S	-	-	-	Protein of unknown function (DUF1694)
LMDHPJAF_00309	7.54e-143	rpsD	-	-	J	ko:K02986	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
LMDHPJAF_00311	0.0	ezrA	-	-	D	ko:K06286	-	ko00000,ko03036	modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
LMDHPJAF_00312	6.82e-273	iscS2	2.8.1.7	-	E	ko:K04487	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko02048,ko03016,ko03029	Aminotransferase class V
LMDHPJAF_00313	8.93e-291	thiI	2.8.1.4	-	H	ko:K03151	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko03016	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
LMDHPJAF_00314	1.05e-157	rsuA	5.4.99.19	-	J	ko:K06183	-	ko00000,ko01000,ko03009	Belongs to the pseudouridine synthase RsuA family
LMDHPJAF_00315	5.48e-230	-	-	-	C	-	-	-	Glycerophosphoryl diester phosphodiesterase family
LMDHPJAF_00316	0.0	yoaB	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	P-type ATPase
LMDHPJAF_00317	0.0	valS	6.1.1.9	-	J	ko:K01873	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
LMDHPJAF_00318	4.14e-295	folC	6.3.2.12, 6.3.2.17	-	H	ko:K11754	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the folylpolyglutamate synthase family
LMDHPJAF_00319	1.06e-158	-	-	-	S	-	-	-	Haloacid dehalogenase-like hydrolase
LMDHPJAF_00320	3.07e-142	radC	-	-	L	ko:K03630	-	ko00000	DNA repair protein
LMDHPJAF_00321	3.11e-225	mreB	-	-	D	ko:K03569	-	ko00000,ko02048,ko03036,ko04812	cell shape determining protein MreB
LMDHPJAF_00322	9.24e-186	mreC	-	-	M	ko:K03570	-	ko00000,ko03036	Involved in formation and maintenance of cell shape
LMDHPJAF_00323	1.63e-122	mreD	-	-	-	ko:K03571	-	ko00000,ko03036	-
LMDHPJAF_00324	9.62e-19	-	-	-	S	-	-	-	Protein of unknown function (DUF4044)
LMDHPJAF_00325	3.12e-68	-	-	-	S	-	-	-	Protein of unknown function (DUF3397)
LMDHPJAF_00326	1.89e-100	mraZ	-	-	K	ko:K03925	-	ko00000	Belongs to the MraZ family
LMDHPJAF_00327	3.4e-228	rsmH	2.1.1.199	-	J	ko:K03438	-	ko00000,ko01000,ko03009	Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
LMDHPJAF_00328	1.61e-72	ftsL	-	-	D	-	-	-	Cell division protein FtsL
LMDHPJAF_00329	0.0	pbpX	-	-	M	ko:K08724,ko:K12552,ko:K12556	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01011	Penicillin-binding Protein
LMDHPJAF_00330	9e-227	mraY	2.7.8.13	-	M	ko:K01000	ko00550,ko01100,ko01502,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
LMDHPJAF_00331	0.0	murD	6.3.2.9	-	M	ko:K01925	ko00471,ko00550,ko01100,map00471,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
LMDHPJAF_00332	3.73e-263	murG	2.4.1.227	GT28	M	ko:K02563	ko00550,ko01100,ko01502,ko04112,map00550,map01100,map01502,map04112	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
LMDHPJAF_00333	5.87e-193	divIB	-	-	D	ko:K03589	ko04112,map04112	ko00000,ko00001,ko03036	Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
LMDHPJAF_00334	5.2e-309	ftsA	-	-	D	ko:K03590	ko04112,map04112	ko00000,ko00001,ko03036,ko04812	Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
LMDHPJAF_00335	2.12e-309	ftsZ	-	-	D	ko:K03531	ko04112,map04112	ko00000,ko00001,ko02048,ko03036,ko04812	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
LMDHPJAF_00336	2.18e-86	sepF	-	-	D	ko:K09772	-	ko00000,ko03036	Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
LMDHPJAF_00337	3.9e-47	ylmG	-	-	S	ko:K02221	-	ko00000,ko02044	YGGT family
LMDHPJAF_00338	1.89e-185	ylmH	-	-	S	-	-	-	S4 domain protein
LMDHPJAF_00339	1.3e-154	divIVA	-	-	D	ko:K04074	-	ko00000,ko03036	DivIVA domain protein
LMDHPJAF_00340	0.0	ileS	6.1.1.5	-	J	ko:K01870	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
LMDHPJAF_00341	2.28e-44	cspA	-	-	K	ko:K03704	-	ko00000,ko03000	'Cold-shock' DNA-binding domain
LMDHPJAF_00342	2.57e-133	nudF	3.6.1.13	-	L	ko:K01515	ko00230,map00230	ko00000,ko00001,ko01000	ADP-ribose pyrophosphatase
LMDHPJAF_00343	1.27e-42	-	-	-	-	-	-	-	-
LMDHPJAF_00344	5.88e-164	mtnN	3.2.2.9	-	E	ko:K01243	ko00270,ko01100,ko01230,map00270,map01100,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
LMDHPJAF_00345	3.38e-273	iscS	2.8.1.7	-	E	ko:K04487	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko02048,ko03016,ko03029	Aminotransferase class V
LMDHPJAF_00346	1.27e-76	XK27_04120	-	-	S	-	-	-	Putative amino acid metabolism
LMDHPJAF_00347	2.58e-277	mnmA	2.8.1.13	-	J	ko:K00566	ko04122,map04122	ko00000,ko00001,ko01000,ko03016	Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
LMDHPJAF_00348	9.12e-161	pgm	-	-	G	-	-	-	Phosphoglycerate mutase family
LMDHPJAF_00349	1.34e-146	-	-	-	S	-	-	-	repeat protein
LMDHPJAF_00350	0.0	recD2	3.1.11.5	-	L	ko:K03581	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
LMDHPJAF_00351	2.31e-180	ytlR	-	-	I	-	-	-	Diacylglycerol kinase catalytic domain
LMDHPJAF_00352	0.0	-	-	-	L	-	-	-	Probable transposase
LMDHPJAF_00353	3.72e-145	-	-	-	L	-	-	-	Resolvase, N terminal domain
LMDHPJAF_00354	1.88e-66	-	-	-	-	-	-	-	-
LMDHPJAF_00355	1.19e-177	XK27_08125	-	-	S	ko:K09861	-	ko00000	Belongs to the UPF0246 family
LMDHPJAF_00356	6.02e-118	-	-	-	S	ko:K06889	-	ko00000	Alpha/beta hydrolase family
LMDHPJAF_00357	4.58e-38	-	-	-	S	ko:K06889	-	ko00000	Alpha/beta hydrolase family
LMDHPJAF_00358	1.2e-146	-	-	-	G	-	-	-	Phosphoglycerate mutase family
LMDHPJAF_00359	7.88e-143	-	-	-	G	-	-	-	phosphoglycerate mutase
LMDHPJAF_00360	1.39e-112	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
LMDHPJAF_00361	4.22e-227	yxeA	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter permease
LMDHPJAF_00362	7.05e-148	lolD	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
LMDHPJAF_00363	1.18e-13	-	-	-	K	ko:K03488	-	ko00000,ko03000	CAT RNA binding domain
LMDHPJAF_00364	3.4e-26	-	-	-	K	ko:K03488	-	ko00000,ko03000	CAT RNA binding domain
LMDHPJAF_00365	5.3e-42	-	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
LMDHPJAF_00366	0.0	pepD4	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
LMDHPJAF_00367	7.88e-50	-	-	-	-	-	-	-	-
LMDHPJAF_00368	5.69e-140	-	-	-	K	-	-	-	WHG domain
LMDHPJAF_00369	9.06e-125	-	1.5.1.36	-	S	ko:K19784,ko:K22393	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	reductase
LMDHPJAF_00370	5.19e-127	azr	1.5.1.36	-	S	ko:K22394	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	NADPH-dependent FMN reductase
LMDHPJAF_00371	1.82e-255	-	4.2.1.126	-	S	ko:K07106,ko:K09963	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Bacterial protein of unknown function (DUF871)
LMDHPJAF_00372	2.92e-190	-	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Tyrosine phosphatase family
LMDHPJAF_00373	1.09e-226	apbE	2.7.1.180	-	H	ko:K03734	-	ko00000,ko01000	Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
LMDHPJAF_00374	7.45e-124	cvpA	-	-	S	-	-	-	Colicin V production protein
LMDHPJAF_00375	2.9e-167	rsmG	2.1.1.170	-	J	ko:K03501	-	ko00000,ko01000,ko03009,ko03036	Specifically methylates the N7 position of a guanine in 16S rRNA
LMDHPJAF_00376	2.47e-195	noc	-	-	K	ko:K03497	-	ko00000,ko03000,ko03036,ko04812	Belongs to the ParB family
LMDHPJAF_00377	1.67e-175	soj	-	-	D	ko:K03496	-	ko00000,ko03036,ko04812	Sporulation initiation inhibitor
LMDHPJAF_00378	1.49e-196	spo0J	-	-	K	ko:K03497	-	ko00000,ko03000,ko03036,ko04812	Belongs to the ParB family
LMDHPJAF_00379	2.12e-57	yyzM	-	-	S	-	-	-	Bacterial protein of unknown function (DUF951)
LMDHPJAF_00380	1.89e-254	ychF	-	-	J	ko:K06942	-	ko00000,ko03009	ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
LMDHPJAF_00381	4.46e-190	-	-	-	S	-	-	-	Protein of unknown function (DUF1129)
LMDHPJAF_00382	0.0	-	-	-	V	ko:K06147,ko:K06148	-	ko00000,ko02000	ABC transporter, ATP-binding protein
LMDHPJAF_00383	0.0	ndvA	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter
LMDHPJAF_00384	2.39e-156	vanR	-	-	K	-	-	-	response regulator
LMDHPJAF_00385	4.88e-262	-	-	-	T	-	-	-	His Kinase A (phosphoacceptor) domain
LMDHPJAF_00386	0.0	murE	6.3.2.13, 6.3.2.7	-	M	ko:K01928,ko:K05362	ko00300,ko00550,ko01100,map00300,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
LMDHPJAF_00387	3.71e-184	racD	5.1.1.13	-	M	ko:K01779	ko00250,ko01054,map00250,map01054	ko00000,ko00001,ko01000	Belongs to the aspartate glutamate racemases family
LMDHPJAF_00388	1.47e-210	natA	-	-	S	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
LMDHPJAF_00389	2.29e-274	natB	-	-	CP	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 family transporter protein
LMDHPJAF_00390	0.0	agl	3.2.1.20	GH31	G	ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 31 family
LMDHPJAF_00391	2.68e-174	fruR	-	-	K	ko:K03436	-	ko00000,ko03000	DeoR C terminal sensor domain
LMDHPJAF_00392	9.92e-212	pfkB	2.7.1.56	-	H	ko:K00882	ko00051,map00051	ko00000,ko00001,ko01000	Belongs to the carbohydrate kinase PfkB family. LacC subfamily
LMDHPJAF_00393	0.0	fruA	2.7.1.202	-	GT	ko:K02768,ko:K02769,ko:K02770	ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphotransferase System
LMDHPJAF_00394	1.32e-17	-	-	-	S	-	-	-	YSIRK type signal peptide
LMDHPJAF_00395	1.25e-173	-	-	-	M	-	-	-	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
LMDHPJAF_00396	4.1e-178	-	3.1.3.102, 3.1.3.104, 3.1.3.23	-	G	ko:K07757,ko:K20861	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Sucrose-6F-phosphate phosphohydrolase
LMDHPJAF_00397	1.07e-57	-	-	-	K	ko:K21903	-	ko00000,ko03000	helix_turn_helix, Arsenical Resistance Operon Repressor
LMDHPJAF_00398	3.58e-207	-	-	-	P	ko:K02077	-	ko00000,ko00002,ko02000	Belongs to the bacterial solute-binding protein 9 family
LMDHPJAF_00399	2.05e-148	adcC	-	-	P	ko:K02074,ko:K09817,ko:K11710	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter
LMDHPJAF_00400	1.47e-172	znuB	-	-	U	ko:K02075,ko:K09816	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC 3 transport family
LMDHPJAF_00401	0.0	lctP	-	-	C	ko:K03303	-	ko00000,ko02000	L-lactate permease
LMDHPJAF_00402	0.0	pepF	-	-	E	ko:K08602	-	ko00000,ko01000,ko01002	oligoendopeptidase F
LMDHPJAF_00403	7.88e-267	brpA	-	-	K	-	-	-	Cell envelope-like function transcriptional attenuator common domain protein
LMDHPJAF_00404	2.03e-52	-	-	-	-	-	-	-	-
LMDHPJAF_00405	1.83e-79	-	-	-	-	-	-	-	-
LMDHPJAF_00406	0.0	-	-	-	S	-	-	-	ABC transporter
LMDHPJAF_00407	8.57e-175	-	-	-	S	-	-	-	Putative threonine/serine exporter
LMDHPJAF_00408	7.42e-102	-	-	-	S	-	-	-	Threonine/Serine exporter, ThrE
LMDHPJAF_00409	6.87e-50	-	-	-	-	-	-	-	-
LMDHPJAF_00410	1.05e-74	dpnM	2.1.1.72	-	H	ko:K06223	ko03430,map03430	ko00000,ko00001,ko01000,ko02048,ko03032,ko03400	Site-specific DNA-methyltransferase (adenine-specific)
LMDHPJAF_00411	1.85e-127	pinR1	-	-	L	-	-	-	Helix-turn-helix domain of Hin and related proteins, a family of DNA-binding domains unique to bacteria and represented by the Hin protein of Salmonella. The basic HTH domain is a simple fold comprised of three core helices that form a right-handed
LMDHPJAF_00412	1.15e-146	-	-	-	K	ko:K09017	-	ko00000,ko03000	Transcriptional regulator
LMDHPJAF_00413	0.0	-	-	-	M	ko:K01992	-	ko00000,ko00002,ko02000	Exporter of polyketide antibiotics
LMDHPJAF_00414	4.75e-215	ybhF_1	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter
LMDHPJAF_00415	8.88e-72	ltrA	-	-	S	-	-	-	Bacterial low temperature requirement A protein (LtrA)
LMDHPJAF_00416	0.0	pepC	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	Peptidase C1-like family
LMDHPJAF_00417	2.02e-114	brpA	-	-	K	-	-	-	Cell envelope-like function transcriptional attenuator common domain protein
LMDHPJAF_00418	1.43e-95	brpA	-	-	K	-	-	-	Cell envelope-like function transcriptional attenuator common domain protein
LMDHPJAF_00419	3.82e-133	dut	3.6.1.23	-	F	ko:K01520	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	dUTP diphosphatase
LMDHPJAF_00420	0.0	radA	-	-	O	ko:K04485	-	ko00000,ko03400	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
LMDHPJAF_00421	0.0	gltX	6.1.1.24	-	J	ko:K09698	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
LMDHPJAF_00422	0.0	cysS	6.1.1.16	-	J	ko:K01883	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-I aminoacyl-tRNA synthetase family
LMDHPJAF_00423	5.57e-104	mrnC	-	-	J	ko:K11145	-	ko00000,ko01000,ko03009	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
LMDHPJAF_00424	1.39e-180	trmH	2.1.1.185	-	J	ko:K03218	-	ko00000,ko01000,ko03009	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
LMDHPJAF_00425	1.03e-113	-	-	-	K	ko:K03091	-	ko00000,ko03021	sigma factor activity
LMDHPJAF_00426	5.9e-46	-	-	-	-	-	-	-	-
LMDHPJAF_00427	0.0	gntK	2.7.1.12	-	G	ko:K00851	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko01000	Belongs to the FGGY kinase family
LMDHPJAF_00428	0.0	dxs	2.2.1.7	-	H	ko:K01662	ko00730,ko00900,ko01100,ko01110,ko01130,map00730,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
LMDHPJAF_00429	1.67e-291	-	-	-	G	-	-	-	Major Facilitator Superfamily
LMDHPJAF_00430	8.14e-241	hepT	2.5.1.30, 2.5.1.83	-	H	ko:K00805,ko:K21275	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	Belongs to the FPP GGPP synthase family
LMDHPJAF_00431	1.48e-27	rpmG	-	-	J	ko:K02913	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL33 family
LMDHPJAF_00432	8.06e-17	secE	-	-	U	ko:K03073	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
LMDHPJAF_00433	5.22e-131	nusG	-	-	K	ko:K02601	-	ko00000,ko03009,ko03021	Participates in transcription elongation, termination and antitermination
LMDHPJAF_00434	1.89e-90	rplK	-	-	J	ko:K02867	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
LMDHPJAF_00435	2.48e-159	rplA	-	-	J	ko:K02863	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
LMDHPJAF_00436	1.07e-263	tnpB	-	-	L	ko:K07496	-	ko00000	Putative transposase DNA-binding domain
LMDHPJAF_00437	5.61e-139	yecS_2	-	-	P	ko:K02029,ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter permease
LMDHPJAF_00438	9.07e-150	glnQ	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	ABC transporter
LMDHPJAF_00439	3.03e-183	aatB	-	-	ET	ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter substrate-binding protein
LMDHPJAF_00440	7.87e-125	rplJ	-	-	J	ko:K02864	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
LMDHPJAF_00441	3.25e-72	rplL	-	-	J	ko:K02935	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
LMDHPJAF_00442	6.06e-179	-	2.1.1.172	-	J	ko:K00564,ko:K10716	-	ko00000,ko01000,ko02000,ko03009	Ion channel
LMDHPJAF_00443	6.32e-42	-	-	-	-	-	-	-	-
LMDHPJAF_00444	2.25e-144	rsmC	2.1.1.172	-	J	ko:K00564	-	ko00000,ko01000,ko03009	Methyltransferase
LMDHPJAF_00445	1.65e-31	-	-	-	-	-	-	-	-
LMDHPJAF_00446	1.67e-111	-	-	-	-	-	-	-	-
LMDHPJAF_00447	3.13e-42	-	-	-	S	-	-	-	Protein conserved in bacteria
LMDHPJAF_00448	6.83e-109	tadA	3.5.4.33	-	F	ko:K11991	-	ko00000,ko01000,ko03016	Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
LMDHPJAF_00449	0.0	dnaX	2.7.7.7	-	L	ko:K02343	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
LMDHPJAF_00450	1.9e-68	yaaK	-	-	S	ko:K09747	-	ko00000	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
LMDHPJAF_00451	8.84e-140	recR	-	-	L	ko:K06187	ko03440,map03440	ko00000,ko00001,ko03400	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
LMDHPJAF_00452	3.03e-44	-	-	-	S	-	-	-	Protein of unknown function (DUF2508)
LMDHPJAF_00453	1.02e-145	tmk	2.7.4.9	-	F	ko:K00943	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
LMDHPJAF_00454	1.02e-67	yaaQ	-	-	S	-	-	-	Cyclic-di-AMP receptor
LMDHPJAF_00455	3.28e-196	holB	2.7.7.7	-	L	ko:K02341	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III
LMDHPJAF_00456	3.33e-78	yabA	-	-	L	-	-	-	Involved in initiation control of chromosome replication
LMDHPJAF_00457	2.06e-197	rsmI	2.1.1.198	-	H	ko:K07056	-	ko00000,ko01000,ko03009	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
LMDHPJAF_00458	1.44e-174	fat	3.1.2.21	-	I	ko:K01071	ko00061,ko01100,map00061,map01100	ko00000,ko00001,ko01000,ko01004	Acyl-ACP thioesterase
LMDHPJAF_00459	1.48e-102	-	-	-	S	-	-	-	ECF transporter, substrate-specific component
LMDHPJAF_00460	8.32e-168	yeaZ	2.3.1.234	-	O	ko:K01409,ko:K14742	-	ko00000,ko01000,ko03016	Universal bacterial protein YeaZ
LMDHPJAF_00461	5.5e-123	rimI	2.3.1.128	-	K	ko:K03789	-	ko00000,ko01000,ko03009	Ribosomal-protein-alanine acetyltransferase
LMDHPJAF_00462	4.98e-250	tsaD	2.3.1.234	-	J	ko:K01409	-	ko00000,ko01000,ko03016	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
LMDHPJAF_00463	5.82e-265	-	-	-	D	-	-	-	nuclear chromosome segregation
LMDHPJAF_00464	9.87e-46	-	-	-	-	-	-	-	-
LMDHPJAF_00465	3.64e-20	-	-	-	-	-	-	-	-
LMDHPJAF_00466	2.8e-94	-	-	-	-	-	-	-	-
LMDHPJAF_00467	3.32e-239	guaC	1.7.1.7	-	F	ko:K00364	ko00230,map00230	ko00000,ko00001,ko01000	Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
LMDHPJAF_00468	2.91e-316	purA	6.3.4.4	-	F	ko:K01939	ko00230,ko00250,ko01100,map00230,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
LMDHPJAF_00469	4.45e-311	purB	4.3.2.2	-	F	ko:K01756	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
LMDHPJAF_00470	6.11e-59	apfA	3.6.1.61	-	F	ko:K18445	ko00230,map00230	ko00000,ko00001,ko01000	NUDIX domain
LMDHPJAF_00471	1.42e-77	yugI	-	-	J	ko:K07570	-	ko00000	general stress protein
LMDHPJAF_00472	1.18e-226	yumC	1.18.1.2, 1.19.1.1	-	C	ko:K21567	-	ko00000,ko01000	Ferredoxin--NADP reductase
LMDHPJAF_00473	8.39e-151	dedA	-	-	S	ko:K03975	-	ko00000	SNARE-like domain protein
LMDHPJAF_00474	1.11e-133	-	-	-	S	-	-	-	Protein of unknown function (DUF1461)
LMDHPJAF_00475	9.06e-186	nagD	3.1.3.41	-	G	ko:K01101	ko00627,ko01120,map00627,map01120	ko00000,ko00001,ko01000	Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
LMDHPJAF_00476	2.3e-123	yutD	-	-	S	-	-	-	Protein of unknown function (DUF1027)
LMDHPJAF_00477	0.0	sasH	3.1.3.5, 3.1.3.6, 3.1.4.16, 3.6.1.45	-	F	ko:K01081,ko:K01119,ko:K07004,ko:K08693,ko:K11751	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the 5'-nucleotidase family
LMDHPJAF_00478	1.15e-73	-	-	-	-	-	-	-	-
LMDHPJAF_00479	0.0	-	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	glycerophosphoryl diester phosphodiesterase
LMDHPJAF_00480	0.0	pepV	3.5.1.18	-	E	ko:K01270,ko:K01274,ko:K01439	ko00300,ko00480,ko01100,ko01120,ko01230,map00300,map00480,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000,ko01002	dipeptidase PepV
LMDHPJAF_00481	0.0	pbp1B	2.4.1.129	GT51	M	ko:K03693,ko:K12551	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01003,ko01011	Penicillin binding protein transpeptidase domain
LMDHPJAF_00482	8.91e-224	ccpA	-	-	K	ko:K02529	-	ko00000,ko03000	catabolite control protein A
LMDHPJAF_00483	1.41e-266	pepQ	3.4.13.9	-	E	ko:K01271	-	ko00000,ko01000,ko01002	Creatinase/Prolidase N-terminal domain
LMDHPJAF_00484	8.01e-66	-	-	-	-	-	-	-	-
LMDHPJAF_00485	2.92e-37	ytxG	-	-	S	-	-	-	protein containing a divergent version of the methyl-accepting chemotaxis-like domain
LMDHPJAF_00486	2.44e-177	ykuT	-	-	M	ko:K16052,ko:K22044	-	ko00000,ko02000	mechanosensitive ion channel
LMDHPJAF_00487	8.02e-276	ackA	2.7.2.1	-	F	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
LMDHPJAF_00488	1.47e-151	rdgB	3.6.1.66	-	F	ko:K02428	ko00230,map00230	ko00000,ko00001,ko01000	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
LMDHPJAF_00489	1.68e-184	murI	3.6.1.66, 5.1.1.3	-	M	ko:K01776,ko:K02428	ko00230,ko00471,ko01100,map00230,map00471,map01100	ko00000,ko00001,ko01000,ko01011	Provides the (R)-glutamate required for cell wall biosynthesis
LMDHPJAF_00490	3.65e-90	yslB	-	-	S	-	-	-	Protein of unknown function (DUF2507)
LMDHPJAF_00491	8.93e-71	trxA	-	-	O	ko:K03671	ko04621,ko05418,map04621,map05418	ko00000,ko00001,ko03110	Belongs to the thioredoxin family
LMDHPJAF_00492	0.0	mutS2	-	-	L	ko:K07456	ko03430,map03430	ko00000,ko00001,ko03400	Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
LMDHPJAF_00493	1.61e-119	cvpA	-	-	S	-	-	-	Colicin V production protein
LMDHPJAF_00494	3.49e-55	yrzB	-	-	S	-	-	-	Belongs to the UPF0473 family
LMDHPJAF_00495	4.81e-94	yrrK	-	-	J	ko:K07447	-	ko00000,ko01000	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
LMDHPJAF_00496	1.08e-56	yrzL	-	-	S	-	-	-	Belongs to the UPF0297 family
LMDHPJAF_00497	0.0	alaS	6.1.1.7	-	J	ko:K01872	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
LMDHPJAF_00498	8.87e-292	cshB	3.6.4.13	-	JKL	ko:K05592,ko:K18692	ko03018,map03018	ko00000,ko00001,ko01000,ko03009,ko03019	DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
LMDHPJAF_00499	1.45e-233	nrnA	3.1.13.3, 3.1.3.7	-	S	ko:K06881	ko00920,ko01100,ko01120,map00920,map01100,map01120	ko00000,ko00001,ko01000,ko03400	DHHA1 domain protein
LMDHPJAF_00500	2.34e-263	dinB	2.7.7.7	-	L	ko:K02346	-	ko00000,ko01000,ko03400	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
LMDHPJAF_00501	0.0	zwf	1.1.1.363, 1.1.1.49	-	G	ko:K00036	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,ko05230,map00030,map00480,map01100,map01110,map01120,map01130,map01200,map05230	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
LMDHPJAF_00502	6.54e-73	yajC	-	-	U	ko:K03210	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Preprotein translocase
LMDHPJAF_00503	5.68e-237	ruvB	3.6.4.12	-	L	ko:K03551	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
LMDHPJAF_00504	1.79e-131	ruvA	3.6.4.12	-	L	ko:K03550	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
LMDHPJAF_00505	0.0	mutL	-	-	L	ko:K03572	ko03430,map03430	ko00000,ko00001,ko03400	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
LMDHPJAF_00506	0.0	mutS	-	-	L	ko:K03555	ko03430,map03430	ko00000,ko00001,ko03400	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
LMDHPJAF_00507	1.85e-284	nisT	-	-	V	ko:K06147,ko:K20485	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko02000	ABC transporter
LMDHPJAF_00508	0.0	groL	-	-	O	ko:K04077	ko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
LMDHPJAF_00509	3.69e-59	groS	-	-	O	ko:K04078	-	ko00000,ko03029,ko03110	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
LMDHPJAF_00511	4.76e-168	-	-	-	S	-	-	-	membrane
LMDHPJAF_00512	3.31e-103	-	-	-	K	-	-	-	LytTr DNA-binding domain
LMDHPJAF_00513	2.5e-45	-	2.7.1.196, 2.7.1.205	-	G	ko:K02760	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
LMDHPJAF_00514	1.88e-131	-	3.2.2.10	-	S	ko:K06966	ko00230,ko00240,map00230,map00240	ko00000,ko00001,ko01000	Belongs to the LOG family
LMDHPJAF_00515	1.19e-149	rex	-	-	K	ko:K01926	-	ko00000,ko03000	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
LMDHPJAF_00516	0.0	ponA	2.4.1.129, 3.4.16.4	GT51	M	ko:K05366	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01003,ko01011	penicillin-binding protein 1A
LMDHPJAF_00517	4.35e-147	recU	-	-	L	ko:K03700	-	ko00000,ko03400	Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
LMDHPJAF_00518	7.67e-135	ypsA	-	-	S	-	-	-	Belongs to the UPF0398 family
LMDHPJAF_00519	9.27e-93	gpsB	-	-	D	-	-	-	Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
LMDHPJAF_00520	5.17e-272	ypsC	-	-	L	ko:K07444	-	ko00000,ko01000	Belongs to the methyltransferase superfamily
LMDHPJAF_00521	1.4e-301	cpdA	-	-	S	-	-	-	Calcineurin-like phosphoesterase
LMDHPJAF_00522	2.89e-274	-	-	-	I	-	-	-	transferase activity, transferring acyl groups other than amino-acyl groups
LMDHPJAF_00523	1.88e-222	degV1	-	-	S	-	-	-	DegV family
LMDHPJAF_00524	8.84e-74	-	-	-	-	-	-	-	-
LMDHPJAF_00525	0.0	fhs	6.3.4.3	-	F	ko:K01938	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Belongs to the formate--tetrahydrofolate ligase family
LMDHPJAF_00526	2.92e-98	lspA	3.4.23.36	-	MU	ko:K03101	ko03060,map03060	ko00000,ko00001,ko01000,ko01002	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
LMDHPJAF_00527	3.61e-214	rluD	5.4.99.23	-	J	ko:K06180	-	ko00000,ko01000,ko03009	Responsible for synthesis of pseudouridine from uracil
LMDHPJAF_00528	4.96e-247	carA	6.3.5.5	-	F	ko:K01956	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthetase glutamine chain
LMDHPJAF_00529	0.0	carB1	6.3.5.5	-	F	ko:K01955	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthase
LMDHPJAF_00530	0.0	FbpA	-	-	K	-	-	-	Fibronectin-binding protein
LMDHPJAF_00531	1.09e-83	-	-	-	-	-	-	-	-
LMDHPJAF_00532	9.16e-208	-	-	-	S	-	-	-	EDD domain protein, DegV family
LMDHPJAF_00533	1.52e-193	-	-	-	-	-	-	-	-
LMDHPJAF_00534	1.27e-109	lysR	-	-	K	-	-	-	Transcriptional regulator
LMDHPJAF_00535	1.81e-24	lysR	-	-	K	-	-	-	Transcriptional regulator
LMDHPJAF_00536	1.1e-257	xerS	-	-	L	ko:K03733	-	ko00000,ko03036	Belongs to the 'phage' integrase family
LMDHPJAF_00537	4.45e-158	-	-	-	S	-	-	-	Protein of unknown function (DUF1275)
LMDHPJAF_00538	9.62e-142	ppiB	5.2.1.8	-	G	ko:K03768	-	ko00000,ko01000,ko03110	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
LMDHPJAF_00539	0.0	recQ	3.6.4.12	-	L	ko:K03654	ko03018,map03018	ko00000,ko00001,ko01000,ko03400	ATP-dependent DNA helicase RecQ
LMDHPJAF_00540	2.36e-218	ppaC	3.6.1.1	-	C	ko:K15986	ko00190,map00190	ko00000,ko00001,ko01000	inorganic pyrophosphatase
LMDHPJAF_00541	1.43e-64	-	-	-	K	-	-	-	Transcriptional regulator
LMDHPJAF_00542	0.0	parC	-	-	L	ko:K02621	-	ko00000,ko01000,ko02048,ko03032,ko03036	Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
LMDHPJAF_00543	0.0	parE	-	-	L	ko:K02622	-	ko00000,ko01000,ko02048,ko03032,ko03036	Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
LMDHPJAF_00544	3.27e-149	plsY	2.3.1.15	-	I	ko:K08591	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
LMDHPJAF_00545	8.83e-147	maa3	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	transferase hexapeptide repeat
LMDHPJAF_00546	1.22e-27	akr5f	1.1.1.346	-	S	ko:K06221	-	ko00000,ko01000	reductase
LMDHPJAF_00547	1.39e-58	akr5f	1.1.1.346	-	S	ko:K06221	-	ko00000,ko01000	reductase
LMDHPJAF_00548	8.03e-118	ybhL	-	-	S	ko:K06890	-	ko00000	Belongs to the BI1 family
LMDHPJAF_00549	1.42e-42	-	-	-	-	-	-	-	-
LMDHPJAF_00550	2.08e-16	-	-	-	S	ko:K07045	-	ko00000	Amidohydrolase
LMDHPJAF_00551	6.07e-292	-	-	-	L	ko:K07478	-	ko00000	AAA C-terminal domain
LMDHPJAF_00552	0.0	-	-	-	S	-	-	-	PglZ domain
LMDHPJAF_00553	1.03e-160	-	-	-	S	-	-	-	KR domain
LMDHPJAF_00554	1.61e-138	-	-	-	C	-	-	-	nitroreductase
LMDHPJAF_00555	2.29e-83	-	-	-	K	-	-	-	Bacterial regulatory helix-turn-helix protein, lysR family
LMDHPJAF_00556	2.24e-147	nth	4.2.99.18	-	L	ko:K10773	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
LMDHPJAF_00557	1.9e-146	dnaD	-	-	L	ko:K02086	-	ko00000	DnaD domain protein
LMDHPJAF_00558	0.0	asnS	6.1.1.22	-	J	ko:K01893	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Asparaginyl-tRNA synthetase
LMDHPJAF_00559	1.48e-114	ypmB	-	-	S	-	-	-	Protein conserved in bacteria
LMDHPJAF_00560	0.0	dinG	3.6.4.12	-	L	ko:K03722	-	ko00000,ko01000,ko03400	helicase involved in DNA repair and perhaps also replication
LMDHPJAF_00561	0.0	addA	3.6.4.12	-	L	ko:K16898	-	ko00000,ko01000,ko03400	ATP-dependent helicase nuclease subunit A
LMDHPJAF_00562	0.0	rexB	3.6.4.12	-	L	ko:K16899	-	ko00000,ko01000,ko03400	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
LMDHPJAF_00563	2.07e-209	mvk	2.7.1.36	-	I	ko:K00869	ko00900,ko01100,ko01110,ko01130,ko04146,map00900,map01100,map01110,map01130,map04146	ko00000,ko00001,ko00002,ko01000	GHMP kinases N terminal domain
LMDHPJAF_00564	8.86e-219	mvaD	4.1.1.33	-	I	ko:K01597	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	diphosphomevalonate decarboxylase
LMDHPJAF_00565	4.15e-258	mvaK2	2.7.4.2	-	I	ko:K00938	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	phosphomevalonate kinase
LMDHPJAF_00566	7.17e-235	fni	5.3.3.2	-	C	ko:K01823	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
LMDHPJAF_00567	0.0	-	-	-	V	ko:K06147,ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
LMDHPJAF_00568	0.0	-	-	-	V	ko:K06147,ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
LMDHPJAF_00569	1.31e-255	-	-	-	G	-	-	-	Transmembrane secretion effector
LMDHPJAF_00570	9.04e-188	-	2.3.1.81	-	V	ko:K00662	-	ko00000,ko01000,ko01504	Aminoglycoside 3-N-acetyltransferase
LMDHPJAF_00571	5.97e-209	rbsU	-	-	U	ko:K06216	-	ko00000,ko02000	ribose uptake protein RbsU
LMDHPJAF_00572	4.28e-85	rbsD	5.4.99.62	-	G	ko:K06726	ko02010,map02010	ko00000,ko00001,ko01000	Catalyzes the interconversion of beta-pyran and beta- furan forms of D-ribose
LMDHPJAF_00573	1.49e-191	folD	1.5.1.5, 3.5.4.9	-	F	ko:K01491	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
LMDHPJAF_00574	4.61e-105	-	5.4.2.11	-	G	ko:K01834	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Phosphoglycerate mutase family
LMDHPJAF_00575	4.92e-99	-	-	-	S	-	-	-	ASCH
LMDHPJAF_00576	2.39e-181	-	-	-	F	-	-	-	Phosphorylase superfamily
LMDHPJAF_00577	1.11e-146	-	-	-	F	-	-	-	Phosphorylase superfamily
LMDHPJAF_00578	2.39e-63	-	-	-	F	-	-	-	NUDIX domain
LMDHPJAF_00579	9e-07	-	-	-	D	ko:K19159	-	ko00000,ko02048	Antitoxin component of a toxin-antitoxin (TA) module
LMDHPJAF_00580	1.38e-102	-	-	-	-	-	-	-	-
LMDHPJAF_00581	1.97e-34	-	-	-	-	-	-	-	-
LMDHPJAF_00582	2.74e-112	-	2.3.1.57	-	K	ko:K00657	ko00330,ko01100,ko04216,map00330,map01100,map04216	ko00000,ko00001,ko00002,ko01000	Acetyltransferase (GNAT) family
LMDHPJAF_00583	4.66e-111	rimL	-	-	J	ko:K03817	-	ko00000,ko01000,ko03009	Acetyltransferase (GNAT) domain
LMDHPJAF_00584	1.94e-62	yfhR3	-	-	S	ko:K06889	-	ko00000	Serine hydrolase (FSH1)
LMDHPJAF_00585	5.19e-78	-	-	-	-	-	-	-	-
LMDHPJAF_00586	2.17e-62	-	-	-	S	-	-	-	MazG-like family
LMDHPJAF_00587	5.44e-113	-	-	-	S	-	-	-	Protein of unknown function (DUF2785)
LMDHPJAF_00588	9.42e-105	-	-	-	FG	-	-	-	HIT domain
LMDHPJAF_00589	1.29e-90	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
LMDHPJAF_00590	1.54e-81	-	-	-	-	-	-	-	-
LMDHPJAF_00591	2.05e-136	yokL3	-	-	J	-	-	-	Acetyltransferase (GNAT) domain
LMDHPJAF_00593	8.08e-62	-	-	-	S	ko:K19157	-	ko00000,ko01000,ko02048	endonuclease activity
LMDHPJAF_00594	4.09e-101	yfhC	-	-	C	-	-	-	nitroreductase
LMDHPJAF_00595	3.83e-38	-	-	-	P	-	-	-	Major Facilitator Superfamily
LMDHPJAF_00596	1.71e-125	-	-	-	P	-	-	-	Major Facilitator Superfamily
LMDHPJAF_00597	1.47e-78	-	-	-	-	-	-	-	-
LMDHPJAF_00598	0.0	-	-	-	V	ko:K06147,ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
LMDHPJAF_00599	5.83e-180	-	-	-	P	ko:K06148	-	ko00000,ko02000	ABC transporter
LMDHPJAF_00600	1.18e-180	-	-	-	S	-	-	-	Phage integrase family
LMDHPJAF_00601	2.18e-70	-	-	-	S	-	-	-	Membrane
LMDHPJAF_00603	4.59e-36	-	-	-	S	-	-	-	sequence-specific DNA binding
LMDHPJAF_00605	4.21e-113	-	-	-	K	-	-	-	ORF6N domain
LMDHPJAF_00606	3.86e-22	-	-	-	-	-	-	-	-
LMDHPJAF_00608	2.33e-32	-	-	-	-	-	-	-	-
LMDHPJAF_00609	6.62e-22	-	-	-	-	-	-	-	-
LMDHPJAF_00612	1.6e-103	-	-	-	S	-	-	-	AAA domain
LMDHPJAF_00613	3.08e-15	-	-	-	V	-	-	-	NUMOD4 motif
LMDHPJAF_00614	0.0	-	-	-	S	-	-	-	helicase activity
LMDHPJAF_00617	0.0	-	-	-	S	ko:K06919	-	ko00000	Phage plasmid primase, P4
LMDHPJAF_00621	8.94e-127	-	2.1.1.37	-	L	ko:K00558	ko00270,ko01100,ko05206,map00270,map01100,map05206	ko00000,ko00001,ko00002,ko01000,ko02048,ko03032,ko03036	C-5 cytosine-specific DNA methylase
LMDHPJAF_00625	3.75e-57	-	-	-	S	-	-	-	VRR_NUC
LMDHPJAF_00628	1.01e-94	-	-	-	-	-	-	-	-
LMDHPJAF_00629	3.74e-120	-	-	-	S	-	-	-	HNH endonuclease
LMDHPJAF_00630	4.38e-102	-	-	-	S	-	-	-	Phage terminase, small subunit
LMDHPJAF_00631	4.39e-284	-	-	-	S	-	-	-	Phage Terminase
LMDHPJAF_00633	1.43e-201	-	-	-	S	-	-	-	Phage portal protein
LMDHPJAF_00634	3.02e-151	-	-	-	S	-	-	-	Clp protease
LMDHPJAF_00635	2.28e-270	-	-	-	S	-	-	-	peptidase activity
LMDHPJAF_00636	1.1e-47	-	-	-	S	-	-	-	Phage gp6-like head-tail connector protein
LMDHPJAF_00643	0.0	-	-	-	L	-	-	-	Phage tail tape measure protein TP901
LMDHPJAF_00644	3.56e-181	-	-	-	S	-	-	-	Phage tail protein
LMDHPJAF_00645	8.22e-252	-	-	-	S	-	-	-	Phage minor structural protein
LMDHPJAF_00647	9.95e-117	-	-	-	S	-	-	-	N-acetylmuramoyl-L-alanine amidase activity
LMDHPJAF_00650	1.39e-26	-	-	-	-	-	-	-	-
LMDHPJAF_00653	5.49e-152	-	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
LMDHPJAF_00654	8e-227	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
LMDHPJAF_00655	3.27e-129	-	-	-	V	-	-	-	Type I restriction modification DNA specificity domain
LMDHPJAF_00656	8e-227	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
LMDHPJAF_00657	3.29e-137	-	3.1.21.3	-	V	ko:K01154	-	ko00000,ko01000,ko02048	Type I restriction modification DNA specificity domain
LMDHPJAF_00658	0.0	-	2.1.1.72	-	V	ko:K03427	-	ko00000,ko01000,ko02048	type I restriction-modification system
LMDHPJAF_00659	4.21e-293	XK27_05225	-	-	S	-	-	-	Tetratricopeptide repeat protein
LMDHPJAF_00660	1.37e-55	hup	-	-	L	ko:K03530	-	ko00000,ko03032,ko03036,ko03400	Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
LMDHPJAF_00661	5.22e-312	der	-	-	S	ko:K03977	-	ko00000,ko03009	GTPase that plays an essential role in the late steps of ribosome biogenesis
LMDHPJAF_00662	9.43e-279	rpsA	-	-	J	ko:K02945	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein S1
LMDHPJAF_00663	1.78e-152	cmk	2.7.4.25	-	F	ko:K00945	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the cytidylate kinase family. Type 1 subfamily
LMDHPJAF_00664	3.68e-122	ribU	-	-	U	-	-	-	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
LMDHPJAF_00665	6.4e-105	-	-	-	M	-	-	-	Lysin motif
LMDHPJAF_00666	4.82e-166	rluB	5.4.99.22	-	J	ko:K06178	-	ko00000,ko01000,ko03009	Belongs to the pseudouridine synthase RsuA family
LMDHPJAF_00667	1.59e-136	scpB	-	-	D	ko:K06024	-	ko00000,ko03036	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
LMDHPJAF_00668	2.04e-171	scpA	-	-	D	ko:K05896	-	ko00000,ko03036	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
LMDHPJAF_00669	2.29e-81	ribT	-	-	K	ko:K02859	-	ko00000	acetyltransferase
LMDHPJAF_00670	4.57e-213	xerD	-	-	D	ko:K04763	-	ko00000,ko03036	recombinase XerD
LMDHPJAF_00671	5.53e-210	yitL	-	-	S	ko:K00243	-	ko00000	S1 domain
LMDHPJAF_00672	0.0	pyk	2.7.1.40	-	G	ko:K00873	ko00010,ko00230,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko04930,ko05165,ko05203,ko05230,map00010,map00230,map00620,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map04930,map05165,map05203,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Belongs to the pyruvate kinase family
LMDHPJAF_00673	2.4e-231	pfkA	2.7.1.11	-	F	ko:K00850	ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04152,ko05230,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04152,map05230	ko00000,ko00001,ko00002,ko01000,ko01009,ko03019	Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
LMDHPJAF_00674	0.0	dnaE	2.7.7.7	-	L	ko:K02337	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase
LMDHPJAF_00675	7.45e-36	-	-	-	S	-	-	-	Protein of unknown function (DUF2929)
LMDHPJAF_00676	0.0	yfkN	3.1.3.6, 3.1.4.16	-	F	ko:K01119	ko00230,ko00240,map00230,map00240	ko00000,ko00001,ko01000	Belongs to the 5'-nucleotidase family
LMDHPJAF_00677	3.88e-38	rpmF	-	-	J	ko:K02911	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Belongs to the bacterial ribosomal protein bL32 family
LMDHPJAF_00678	8.03e-63	-	-	-	S	-	-	-	Lipopolysaccharide assembly protein A domain
LMDHPJAF_00679	4.82e-183	-	-	-	S	ko:K07124	-	ko00000	Belongs to the short-chain dehydrogenases reductases (SDR) family
LMDHPJAF_00680	1.14e-224	rnz	3.1.26.11	-	J	ko:K00784	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
LMDHPJAF_00681	0.0	oatA	-	-	I	-	-	-	Acyltransferase
LMDHPJAF_00682	1.26e-304	obg	-	-	S	ko:K03979	-	ko00000,ko01000,ko03009	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
LMDHPJAF_00683	0.0	uvrC	-	-	L	ko:K03703	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
LMDHPJAF_00684	9.66e-221	iunH	3.2.2.1	-	F	ko:K01239	ko00230,ko00760,ko01100,map00230,map00760,map01100	ko00000,ko00001,ko01000	inosine-uridine preferring nucleoside hydrolase
LMDHPJAF_00685	8.71e-133	apl	3.1.3.1	-	S	ko:K01077	ko00730,ko00790,ko01100,ko02020,map00730,map00790,map01100,map02020	ko00000,ko00001,ko00002,ko00537,ko01000,ko04147	SNARE associated Golgi protein
LMDHPJAF_00686	6.41e-193	-	-	-	L	-	-	-	Phage integrase, N-terminal SAM-like domain
LMDHPJAF_00687	2.06e-145	-	-	-	GM	-	-	-	NmrA-like family
LMDHPJAF_00689	3.36e-160	yagE	-	-	E	-	-	-	amino acid
LMDHPJAF_00690	2.03e-09	-	-	-	-	-	-	-	-
LMDHPJAF_00691	1.3e-301	serS	6.1.1.11	-	J	ko:K01875	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
LMDHPJAF_00692	6.85e-132	yjcK	2.3.1.128	-	J	ko:K03790	-	ko00000,ko01000,ko03009	Acetyltransferase (GNAT) domain
LMDHPJAF_00693	2.53e-139	-	-	-	S	-	-	-	SNARE associated Golgi protein
LMDHPJAF_00694	7.52e-198	-	-	-	I	-	-	-	alpha/beta hydrolase fold
LMDHPJAF_00695	6.65e-198	plcR	-	-	K	ko:K20480	ko02024,map02024	ko00000,ko00001,ko03000	Helix-turn-helix
LMDHPJAF_00696	0.0	gabD	1.2.1.16, 1.2.1.20, 1.2.1.79	-	C	ko:K00135	ko00250,ko00310,ko00350,ko00650,ko00760,ko01100,ko01120,map00250,map00310,map00350,map00650,map00760,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Belongs to the aldehyde dehydrogenase family
LMDHPJAF_00697	2.76e-225	-	-	-	-	-	-	-	-
LMDHPJAF_00698	4.32e-163	-	-	-	S	-	-	-	SNARE associated Golgi protein
LMDHPJAF_00699	1.01e-181	-	-	-	S	-	-	-	haloacid dehalogenase-like hydrolase
LMDHPJAF_00700	0.0	ydgH	-	-	S	ko:K06994	-	ko00000	MMPL family
LMDHPJAF_00701	8.9e-125	yobS	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
LMDHPJAF_00702	8.97e-204	-	3.5.2.6	-	V	ko:K17836	ko00311,ko01130,ko01501,map00311,map01130,map01501	ko00000,ko00001,ko00002,ko01000,ko01504	Beta-lactamase enzyme family
LMDHPJAF_00703	1.86e-213	-	-	-	G	-	-	-	BadF/BadG/BcrA/BcrD ATPase family
LMDHPJAF_00704	1.37e-99	yjcF	-	-	S	-	-	-	Acetyltransferase (GNAT) domain
LMDHPJAF_00705	2.6e-113	XK27_03150	2.3.1.57	-	K	ko:K22441	-	ko00000,ko01000	Acetyltransferase (GNAT) domain
LMDHPJAF_00706	5.07e-98	yybA	-	-	K	-	-	-	Transcriptional regulator
LMDHPJAF_00707	1.12e-73	-	-	-	S	ko:K08987	-	ko00000	Protein of unknown function (DUF1304)
LMDHPJAF_00708	1.48e-306	-	-	-	G	ko:K02027	-	ko00000,ko00002,ko02000	Bacterial extracellular solute-binding protein
LMDHPJAF_00709	1.62e-314	-	-	-	S	-	-	-	Zn-dependent metallo-hydrolase RNA specificity domain
LMDHPJAF_00710	1.13e-187	-	-	-	P	ko:K02026	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
LMDHPJAF_00711	3.57e-201	-	-	-	P	ko:K02025	-	ko00000,ko00002,ko02000	ABC-type sugar transport systems, permease components
LMDHPJAF_00712	5.44e-256	malK	-	-	P	ko:K10112,ko:K17240	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ATPases associated with a variety of cellular activities
LMDHPJAF_00713	0.0	pepD1	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
LMDHPJAF_00714	2.83e-200	endA	-	-	F	ko:K15051	-	ko00000	DNA RNA non-specific endonuclease
LMDHPJAF_00715	1.85e-201	dkgB	-	-	S	-	-	-	reductase
LMDHPJAF_00716	1.81e-23	ltrA	-	-	S	-	-	-	Bacterial low temperature requirement A protein (LtrA)
LMDHPJAF_00717	5.65e-76	ltrA	-	-	S	-	-	-	Bacterial low temperature requirement A protein (LtrA)
LMDHPJAF_00718	1.83e-231	-	2.7.7.7	-	L	ko:K02342	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	EXOIII
LMDHPJAF_00719	5.25e-193	-	-	-	K	-	-	-	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
LMDHPJAF_00720	9.79e-143	yviA	-	-	S	-	-	-	Protein of unknown function (DUF421)
LMDHPJAF_00721	3.73e-94	-	-	-	S	-	-	-	Protein of unknown function (DUF3290)
LMDHPJAF_00722	2.64e-304	yqjE	3.4.11.14, 3.4.11.4	-	E	ko:K01258,ko:K01263	-	ko00000,ko01000,ko01002	Cleaves the N-terminal amino acid of tripeptides
LMDHPJAF_00723	3.4e-120	-	-	-	S	-	-	-	PAS domain
LMDHPJAF_00724	4.68e-186	pnuC	-	-	H	ko:K03811	-	ko00000,ko02000	nicotinamide mononucleotide transporter
LMDHPJAF_00725	1.15e-67	mscL	-	-	M	ko:K03282	-	ko00000,ko02000	Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
LMDHPJAF_00726	1.91e-179	-	-	-	S	-	-	-	PAS domain
LMDHPJAF_00727	8.09e-300	tcyP	-	-	U	ko:K06956	-	ko00000	Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
LMDHPJAF_00728	8.82e-68	-	-	GT2	S	ko:K12990	ko02024,ko02025,map02024,map02025	ko00000,ko00001,ko01000,ko01003,ko01005	Glycosyltransferase, group 2 family protein
LMDHPJAF_00729	1.54e-17	-	-	-	M	-	-	-	Domain of unknown function (DUF4422)
LMDHPJAF_00730	3e-91	-	-	-	M	-	-	-	Glycosyltransferase sugar-binding region containing DXD motif
LMDHPJAF_00732	6.41e-71	-	-	-	S	-	-	-	Glycosyltransferase like family 2
LMDHPJAF_00733	2.41e-83	-	-	GT2	S	ko:K12990	ko02024,ko02025,map02024,map02025	ko00000,ko00001,ko01000,ko01003,ko01005	Glycosyl transferase family 2
LMDHPJAF_00734	1.85e-59	cps4F	-	-	M	-	-	-	Glycosyl transferases group 1
LMDHPJAF_00735	7.01e-14	-	-	GT4	M	ko:K19424	-	ko00000,ko01000,ko01003	Glycosyl transferases group 1
LMDHPJAF_00736	2.35e-135	-	-	-	M	-	-	-	Glycosyl transferase 4-like
LMDHPJAF_00737	2.25e-136	epsE2	-	-	M	-	-	-	Bacterial sugar transferase
LMDHPJAF_00738	1.33e-176	ywqE	3.1.3.48	-	GM	ko:K01104	-	ko00000,ko01000	PHP domain protein
LMDHPJAF_00739	1e-155	ywqD	-	-	D	-	-	-	Capsular exopolysaccharide family
LMDHPJAF_00740	3.68e-178	epsB	-	-	M	-	-	-	biosynthesis protein
LMDHPJAF_00741	3.91e-164	brpA	-	-	K	-	-	-	Cell envelope-like function transcriptional attenuator common domain protein
LMDHPJAF_00742	3.5e-48	-	-	-	K	-	-	-	DNA-templated transcription, initiation
LMDHPJAF_00743	2.97e-39	frnE	5.3.4.1	-	Q	ko:K01829	-	ko00000,ko01000	DSBA-like thioredoxin domain
LMDHPJAF_00744	3.28e-17	frnE	5.3.4.1	-	Q	ko:K01829	-	ko00000,ko01000	DSBA-like thioredoxin domain
LMDHPJAF_00745	1.05e-277	-	-	-	-	-	-	-	-
LMDHPJAF_00746	3.06e-25	-	-	-	S	-	-	-	Domain of unknown function (DUF4767)
LMDHPJAF_00747	6.62e-148	frnE	5.3.4.1	-	Q	ko:K01829	-	ko00000,ko01000	DSBA-like thioredoxin domain
LMDHPJAF_00749	7.33e-98	-	-	-	-	-	-	-	-
LMDHPJAF_00750	4.47e-113	ptpA	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
LMDHPJAF_00751	6.23e-133	engB	-	-	D	ko:K03978	-	ko00000,ko03036	Necessary for normal cell division and for the maintenance of normal septation
LMDHPJAF_00752	1.68e-294	clpX	-	-	O	ko:K03544	ko04112,map04112	ko00000,ko00001,ko03110	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
LMDHPJAF_00753	9.9e-276	tig	-	-	D	ko:K03545	-	ko00000	Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
LMDHPJAF_00754	2.45e-288	tuf	-	-	J	ko:K02358,ko:K15771	ko02010,map02010	ko00000,ko00001,ko00002,ko02000,ko03012,ko03029,ko04147	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
LMDHPJAF_00755	9.52e-205	-	-	-	-	-	-	-	-
LMDHPJAF_00756	0.0	rnjB	-	-	J	ko:K12574	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
LMDHPJAF_00757	5.85e-56	rpsO	-	-	J	ko:K02956	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
LMDHPJAF_00758	1.8e-46	rpsT	-	-	J	ko:K02968	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 16S ribosomal RNA
LMDHPJAF_00759	2.78e-226	holA	2.7.7.7	-	L	ko:K02340	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III delta subunit
LMDHPJAF_00760	0.0	comEC	-	-	S	ko:K02238	-	ko00000,ko00002,ko02044	Competence protein ComEC
LMDHPJAF_00761	2.9e-134	comEA	-	-	L	ko:K02237	-	ko00000,ko00002,ko02044	Competence protein ComEA
LMDHPJAF_00762	1.56e-231	lon	-	-	T	ko:K07177	ko02024,map02024	ko00000,ko00001,ko01002	Belongs to the peptidase S16 family
LMDHPJAF_00763	1.93e-111	coaD	2.7.7.3	-	H	ko:K00954	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
LMDHPJAF_00764	2.04e-123	rsmD	2.1.1.171	-	L	ko:K08316	-	ko00000,ko01000,ko03009	RNA methyltransferase, RsmD family
LMDHPJAF_00765	4e-66	ylbG	-	-	S	-	-	-	UPF0298 protein
LMDHPJAF_00766	1.25e-264	ftsW	-	-	D	ko:K03588	ko04112,map04112	ko00000,ko00001,ko02000,ko03036	Belongs to the SEDS family
LMDHPJAF_00767	0.0	typA	-	-	T	ko:K06207	-	ko00000	GTP-binding protein TypA
LMDHPJAF_00768	9.73e-132	def	3.5.1.88	-	J	ko:K01462	-	ko00000,ko01000	Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
LMDHPJAF_00769	3.08e-47	ykzG	-	-	S	-	-	-	Belongs to the UPF0356 family
LMDHPJAF_00770	0.0	rnjA	-	-	J	ko:K12574	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
LMDHPJAF_00771	1.28e-156	-	-	-	-	-	-	-	-
LMDHPJAF_00772	4.47e-201	-	-	-	O	-	-	-	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
LMDHPJAF_00773	0.0	glpQ	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	Membrane domain of glycerophosphoryl diester phosphodiesterase
LMDHPJAF_00774	5.84e-174	-	3.5.2.6	-	V	ko:K17836	ko00311,ko01130,ko01501,map00311,map01130,map01501	ko00000,ko00001,ko00002,ko01000,ko01504	Beta-lactamase enzyme family
LMDHPJAF_00775	6.61e-195	-	-	-	K	-	-	-	Helix-turn-helix domain, rpiR family
LMDHPJAF_00776	4.71e-196	-	-	-	C	-	-	-	Domain of unknown function (DUF4931)
LMDHPJAF_00777	2.49e-61	aroD	1.1.1.25, 4.2.1.10	-	E	ko:K03785,ko:K13832	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	3-dehydroquinate dehydratase activity
LMDHPJAF_00778	1.28e-13	aroD	1.1.1.25, 4.2.1.10	-	E	ko:K03785,ko:K13832	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	3-dehydroquinate dehydratase activity
LMDHPJAF_00779	3.04e-198	-	-	-	-	-	-	-	-
LMDHPJAF_00780	1.75e-276	mdtG2	-	-	EGP	ko:K08161	-	ko00000,ko02000	Transporter, major facilitator family protein
LMDHPJAF_00781	3.41e-160	puuD	-	-	S	ko:K07010	-	ko00000,ko01002	peptidase C26
LMDHPJAF_00782	0.0	-	-	-	V	-	-	-	ABC transporter transmembrane region
LMDHPJAF_00783	8.17e-114	ymdB	-	-	S	-	-	-	Macro domain protein
LMDHPJAF_00784	0.0	scrA	2.7.1.211	-	G	ko:K02808,ko:K02809,ko:K02810	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
LMDHPJAF_00785	0.0	scrB	3.2.1.26	GH32	G	ko:K01193	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	invertase
LMDHPJAF_00786	2.61e-235	scrR	-	-	K	ko:K02529,ko:K03484	-	ko00000,ko03000	Transcriptional regulator, LacI family
LMDHPJAF_00787	1.01e-181	-	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Tyrosine phosphatase family
LMDHPJAF_00788	1.82e-186	thiD	2.7.1.49, 2.7.4.7	-	H	ko:K00941	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Phosphomethylpyrimidine kinase
LMDHPJAF_00789	3.43e-169	cobQ	-	-	S	ko:K07009	-	ko00000	glutamine amidotransferase
LMDHPJAF_00790	0.0	yhdG	-	-	E	ko:K03294	-	ko00000	Amino Acid
LMDHPJAF_00791	1.56e-203	-	-	-	EG	-	-	-	EamA-like transporter family
LMDHPJAF_00792	3.33e-242	asnA	6.3.1.1	-	F	ko:K01914	ko00250,ko00460,ko01100,ko01110,ko01230,map00250,map00460,map01100,map01110,map01230	ko00000,ko00001,ko01000	aspartate--ammonia ligase
LMDHPJAF_00793	1.15e-301	-	-	-	E	-	-	-	amino acid
LMDHPJAF_00794	1.98e-175	puuD	-	-	S	ko:K07010	-	ko00000,ko01002	peptidase C26
LMDHPJAF_00795	2.68e-131	-	-	-	L	ko:K07497	-	ko00000	PFAM Integrase catalytic region
LMDHPJAF_00796	4.94e-37	-	-	-	L	ko:K07483	-	ko00000	transposase activity
LMDHPJAF_00797	5.41e-295	yifK	-	-	E	ko:K03293	-	ko00000	Amino acid permease
LMDHPJAF_00798	0.0	yifK	-	-	E	ko:K03293	-	ko00000	Amino acid permease
LMDHPJAF_00799	1.43e-84	-	-	-	S	-	-	-	Domain of unknown function (DUF956)
LMDHPJAF_00800	2.75e-216	manN	-	-	G	ko:K02796	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	system, mannose fructose sorbose family IID component
LMDHPJAF_00801	2.49e-166	manY	-	-	G	ko:K02746,ko:K02795	ko00051,ko00052,ko00520,ko01100,ko02060,map00051,map00052,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	PTS system
LMDHPJAF_00802	9.06e-233	manL	2.7.1.191	-	G	ko:K02793,ko:K02794	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system sorbose subfamily IIB component
LMDHPJAF_00805	7.22e-16	-	-	-	S	-	-	-	ORF located using Blastx
LMDHPJAF_00808	5.56e-195	-	-	-	EG	-	-	-	EamA-like transporter family
LMDHPJAF_00809	0.0	-	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
LMDHPJAF_00810	2.27e-241	pts33BCA	-	-	G	ko:K02755,ko:K02756,ko:K02757	ko02060,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
LMDHPJAF_00811	4.89e-161	bglG5	-	-	K	ko:K03488	-	ko00000,ko03000	CAT RNA binding domain
LMDHPJAF_00812	1.13e-133	efp	-	-	J	ko:K02356	-	ko00000,ko03012	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
LMDHPJAF_00813	7.58e-210	coaA	2.7.1.33	-	F	ko:K00867	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Pantothenic acid kinase
LMDHPJAF_00814	2.37e-135	-	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase
LMDHPJAF_00815	4.84e-157	-	-	-	S	-	-	-	Peptidase_C39 like family
LMDHPJAF_00816	0.0	helD	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	DNA helicase
LMDHPJAF_00817	5.92e-150	XK27_08875	-	-	O	-	-	-	PFAM peptidase M10A and M12B, matrixin and adamalysin
LMDHPJAF_00819	0.0	-	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	ATPase, P-type (transporting), HAD superfamily, subfamily IC
LMDHPJAF_00820	4.24e-181	-	-	-	K	-	-	-	Helix-turn-helix domain, rpiR family
LMDHPJAF_00821	2.81e-165	nanE	5.1.3.9	-	G	ko:K01788	ko00520,map00520	ko00000,ko00001,ko01000	Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
LMDHPJAF_00822	3.01e-42	ptsG	2.7.1.199, 2.7.1.208	-	G	ko:K02777,ko:K02778,ko:K02779,ko:K02790,ko:K02791	ko00010,ko00500,ko00520,ko02026,ko02060,ko05111,map00010,map00500,map00520,map02026,map02060,map05111	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system, EIIB
LMDHPJAF_00823	1.76e-122	ptsG	2.7.1.199, 2.7.1.208	-	G	ko:K02777,ko:K02778,ko:K02779,ko:K02790,ko:K02791	ko00010,ko00500,ko00520,ko02026,ko02060,ko05111,map00010,map00500,map00520,map02026,map02060,map05111	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system, EIIB
LMDHPJAF_00824	2.7e-224	ptsG	2.7.1.199, 2.7.1.208	-	G	ko:K02777,ko:K02778,ko:K02779,ko:K02790,ko:K02791	ko00010,ko00500,ko00520,ko02026,ko02060,ko05111,map00010,map00500,map00520,map02026,map02060,map05111	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system, EIIB
LMDHPJAF_00825	8.56e-85	exoA	3.1.11.2	-	L	ko:K01142	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	exodeoxyribonuclease III
LMDHPJAF_00826	8.86e-30	exoA	3.1.11.2	-	L	ko:K01142	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	exodeoxyribonuclease III
LMDHPJAF_00827	1.65e-69	-	-	-	-	-	-	-	-
LMDHPJAF_00828	1.32e-35	-	-	-	-	-	-	-	-
LMDHPJAF_00829	3.58e-161	gpm2	-	-	G	-	-	-	Phosphoglycerate mutase family
LMDHPJAF_00830	0.0	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	FtsX-like permease family
LMDHPJAF_00831	3.81e-172	cysA	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
LMDHPJAF_00832	0.0	-	-	-	E	-	-	-	Amino Acid
LMDHPJAF_00833	3.47e-285	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
LMDHPJAF_00834	2.13e-295	hflX	-	-	S	ko:K03665	-	ko00000,ko03009	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
LMDHPJAF_00835	6.05e-292	-	-	-	S	-	-	-	Putative peptidoglycan binding domain
LMDHPJAF_00836	9.97e-164	-	-	-	M	ko:K21471	-	ko00000,ko01000,ko01002,ko01011	NlpC P60 family protein
LMDHPJAF_00837	1.61e-126	gmk2	2.7.4.8	-	F	ko:K00942	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko00002,ko01000	Guanylate kinase
LMDHPJAF_00838	1.87e-58	-	-	-	-	-	-	-	-
LMDHPJAF_00839	0.0	-	-	-	S	-	-	-	O-antigen ligase like membrane protein
LMDHPJAF_00840	1.29e-141	-	-	-	-	-	-	-	-
LMDHPJAF_00841	2.61e-105	nrdI	-	-	F	ko:K03647	-	ko00000	Belongs to the NrdI family
LMDHPJAF_00842	8.97e-224	nrdF	1.17.4.1	-	F	ko:K00526	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
LMDHPJAF_00843	6.79e-105	-	-	-	-	-	-	-	-
LMDHPJAF_00844	5.46e-42	-	-	-	T	ko:K07171	-	ko00000,ko01000,ko02048	PemK-like, MazF-like toxin of type II toxin-antitoxin system
LMDHPJAF_00845	3.4e-158	-	-	-	M	-	-	-	Rib/alpha-like repeat
LMDHPJAF_00847	5.57e-18	XK27_01125	-	-	L	ko:K07484	-	ko00000	PFAM IS66 Orf2 family protein
LMDHPJAF_00848	1.08e-07	-	-	-	EP	-	-	-	Plasmid replication protein
LMDHPJAF_00849	4.94e-12	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
LMDHPJAF_00850	8.26e-271	-	-	-	S	-	-	-	Sterol carrier protein domain
LMDHPJAF_00851	3.04e-148	-	-	-	S	ko:K07118	-	ko00000	NAD(P)H-binding
LMDHPJAF_00852	1.28e-81	-	-	-	S	-	-	-	Protein of unknown function (DUF975)
LMDHPJAF_00853	0.0	tetM	-	-	J	ko:K18220	-	br01600,ko00000,ko01504	of the elongation factors EF-G and EF-2. Tet(M) and Tet(O) catalyze the release of tetracycline (Tc) from the ribosome
LMDHPJAF_00854	5.66e-80	-	-	-	S	ko:K07118	-	ko00000	NAD(P)H-binding
LMDHPJAF_00855	6.07e-155	-	-	-	S	-	-	-	Protein of unknown function (DUF975)
LMDHPJAF_00856	2.93e-174	ysaA	3.1.3.5, 3.8.1.2	-	S	ko:K01560,ko:K07025,ko:K08723	ko00230,ko00240,ko00361,ko00625,ko00760,ko01100,ko01110,ko01120,map00230,map00240,map00361,map00625,map00760,map01100,map01110,map01120	ko00000,ko00001,ko01000	Haloacid dehalogenase-like hydrolase
LMDHPJAF_00857	4.16e-196	yitS	-	-	S	-	-	-	EDD domain protein, DegV family
LMDHPJAF_00858	1.07e-23	-	-	-	-	-	-	-	-
LMDHPJAF_00859	0.0	fusA1	-	-	J	-	-	-	elongation factor G
LMDHPJAF_00860	1.01e-309	eriC	-	-	P	ko:K03281	-	ko00000	chloride
LMDHPJAF_00861	4.96e-178	pepO	-	-	O	ko:K07386	-	ko00000,ko01000,ko01002	Peptidase family M13
LMDHPJAF_00862	9.1e-159	XK27_02480	-	-	EGP	-	-	-	Major facilitator Superfamily
LMDHPJAF_00863	1.5e-20	-	-	-	S	-	-	-	CsbD-like
LMDHPJAF_00864	1.83e-54	-	-	-	S	-	-	-	Transglycosylase associated protein
LMDHPJAF_00865	1.2e-202	xth	3.1.11.2	-	L	ko:K01142	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	exodeoxyribonuclease III
LMDHPJAF_00866	0.0	-	-	-	L	-	-	-	Helicase C-terminal domain protein
LMDHPJAF_00867	4.77e-178	-	-	-	S	-	-	-	Alpha beta hydrolase
LMDHPJAF_00868	4.32e-37	-	-	-	-	-	-	-	-
LMDHPJAF_00869	2.07e-222	ydbI	-	-	K	-	-	-	AI-2E family transporter
LMDHPJAF_00873	1.86e-130	lmrA	3.6.3.44	-	V	ko:K02021,ko:K06147,ko:K11085,ko:K18104	ko01501,ko02010,map01501,map02010	ko00000,ko00001,ko00002,ko01000,ko01504,ko02000	ABC transporter
LMDHPJAF_00874	1.1e-124	-	-	-	KLT	-	-	-	Protein kinase domain
LMDHPJAF_00877	6.24e-65	-	2.7.13.3	-	T	ko:K07706	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	GHKL domain
LMDHPJAF_00878	4.57e-58	-	-	-	K	ko:K07707	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko02022	LytTr DNA-binding domain
LMDHPJAF_00879	8.3e-309	-	1.8.1.7	-	C	ko:K00383	ko00480,ko04918,map00480,map04918	ko00000,ko00001,ko01000	pyridine nucleotide-disulfide oxidoreductase
LMDHPJAF_00880	1.13e-119	guaB	1.1.1.205	-	F	ko:K00088	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
LMDHPJAF_00881	1.26e-45	guaB	1.1.1.205	-	F	ko:K00088	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
LMDHPJAF_00882	4.08e-132	-	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase
LMDHPJAF_00883	1.59e-245	ldhA	1.1.1.28	-	C	ko:K03778,ko:K18347	ko00620,ko01120,ko01502,ko02020,map00620,map01120,map01502,map02020	ko00000,ko00001,ko00002,ko01000,ko01504	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
LMDHPJAF_00884	0.0	-	-	-	S	-	-	-	domain, Protein
LMDHPJAF_00885	0.0	-	-	-	E	ko:K20265	ko02024,map02024	ko00000,ko00001,ko02000	amino acid
LMDHPJAF_00886	2.55e-216	-	-	-	K	-	-	-	LysR substrate binding domain
LMDHPJAF_00887	0.0	-	1.3.5.4	-	C	ko:K00244	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	ko00000,ko00001,ko00002,ko01000	FAD binding domain
LMDHPJAF_00888	7.05e-306	brnQ	-	-	U	ko:K03311	-	ko00000	Component of the transport system for branched-chain amino acids
LMDHPJAF_00889	3.88e-169	menG	2.1.1.163, 2.1.1.201	-	H	ko:K03183	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
LMDHPJAF_00890	1.97e-227	pepR	3.4.11.5	-	E	ko:K01259	ko00330,map00330	ko00000,ko00001,ko01000,ko01002	Releases the N-terminal proline from various substrates
LMDHPJAF_00891	6.63e-232	-	3.5.1.24	-	M	ko:K01442	ko00120,ko00121,ko01100,map00120,map00121,map01100	ko00000,ko00001,ko01000	Linear amide C-N hydrolases, choloylglycine hydrolase family
LMDHPJAF_00892	8.46e-155	-	-	-	I	-	-	-	Acyl-transferase
LMDHPJAF_00895	2.49e-166	yycF	-	-	K	ko:K07668	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	response regulator
LMDHPJAF_00896	0.0	vicK	2.7.13.3	-	T	ko:K07652	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
LMDHPJAF_00897	5.83e-308	yycH	-	-	S	-	-	-	YycH protein
LMDHPJAF_00898	1.22e-181	yycI	-	-	S	-	-	-	YycH protein
LMDHPJAF_00899	1.76e-190	vicX	3.1.26.11	-	S	ko:K00784	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	domain protein
LMDHPJAF_00900	6.47e-234	htrA	3.4.21.107	-	O	ko:K04771	ko01503,ko02020,map01503,map02020	ko00000,ko00001,ko00002,ko01000,ko01002,ko03110	serine protease
LMDHPJAF_00901	6.08e-107	rlmH	2.1.1.177	-	J	ko:K00783	-	ko00000,ko01000,ko03009	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
LMDHPJAF_00902	1.48e-140	-	-	-	P	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Cobalt transport protein
LMDHPJAF_00903	9.09e-315	-	-	-	S	ko:K16786,ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
LMDHPJAF_00904	6.53e-127	ykoE	-	-	S	ko:K16925	-	ko00000,ko00002,ko02000	ABC-type cobalt transport system, permease component
LMDHPJAF_00905	6.88e-205	-	-	-	K	-	-	-	helix_turn_helix, arabinose operon control protein
LMDHPJAF_00906	2.33e-206	htpX	-	-	O	ko:K03799	-	ko00000,ko00002,ko01000,ko01002	Belongs to the peptidase M48B family
LMDHPJAF_00907	4.25e-122	lemA	-	-	S	ko:K03744	-	ko00000	LemA family
LMDHPJAF_00908	1.74e-235	ysdE	-	-	P	-	-	-	Citrate transporter
LMDHPJAF_00909	1.64e-84	-	-	-	S	-	-	-	Iron-sulphur cluster biosynthesis
LMDHPJAF_00910	1.14e-23	-	-	-	-	-	-	-	-
LMDHPJAF_00911	6.24e-289	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
LMDHPJAF_00912	9.28e-153	-	-	-	-	-	-	-	-
LMDHPJAF_00914	2.18e-304	-	-	-	M	-	-	-	Glycosyl transferase
LMDHPJAF_00915	6.8e-252	-	-	-	G	-	-	-	Glycosyl hydrolases family 8
LMDHPJAF_00916	1.11e-154	yfbR	-	-	S	ko:K07023	-	ko00000	HD containing hydrolase-like enzyme
LMDHPJAF_00917	1.61e-224	-	-	-	L	-	-	-	HNH nucleases
LMDHPJAF_00918	3.81e-25	-	-	-	-	-	-	-	-
LMDHPJAF_00919	6.58e-175	glnQ	-	-	E	ko:K17076	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
LMDHPJAF_00920	0.0	XK27_05795	-	-	P	ko:K17073,ko:K17074	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
LMDHPJAF_00921	2.31e-62	yxlJ	3.2.2.21	-	L	ko:K03652	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Belongs to the DNA glycosylase MPG family
LMDHPJAF_00922	3.72e-145	-	-	-	L	-	-	-	Resolvase, N terminal domain
LMDHPJAF_00923	0.0	-	-	-	L	-	-	-	Probable transposase
LMDHPJAF_00924	6.44e-40	yxlJ	3.2.2.21	-	L	ko:K03652	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Belongs to the DNA glycosylase MPG family
LMDHPJAF_00925	2.67e-80	yeaO	-	-	S	-	-	-	Protein of unknown function, DUF488
LMDHPJAF_00926	1.15e-163	terC	-	-	P	-	-	-	Integral membrane protein TerC family
LMDHPJAF_00927	2.9e-111	adaB	2.1.1.63	-	L	ko:K00567,ko:K10778,ko:K13531	-	ko00000,ko01000,ko03000,ko03400	6-O-methylguanine DNA methyltransferase, DNA binding domain
LMDHPJAF_00928	5.87e-166	cobB	-	-	K	ko:K12410	-	ko00000,ko01000	SIR2 family
LMDHPJAF_00929	3.66e-103	-	-	-	-	-	-	-	-
LMDHPJAF_00930	0.0	cls	-	-	I	ko:K06131	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
LMDHPJAF_00931	4.26e-158	yugP	-	-	S	ko:K06973	-	ko00000	Putative neutral zinc metallopeptidase
LMDHPJAF_00932	3.23e-219	-	-	-	S	-	-	-	Alpha/beta hydrolase of unknown function (DUF915)
LMDHPJAF_00933	1.3e-178	rnhA	3.1.26.4	-	L	ko:K03469	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
LMDHPJAF_00935	2.35e-219	-	-	-	S	-	-	-	Protein of unknown function (DUF1002)
LMDHPJAF_00936	3.73e-202	epsV	-	-	S	-	-	-	glycosyl transferase family 2
LMDHPJAF_00937	1.63e-159	-	-	-	S	-	-	-	Alpha/beta hydrolase family
LMDHPJAF_00938	1.13e-81	-	-	-	-	-	-	-	-
LMDHPJAF_00939	1.23e-229	prs2	2.7.6.1	-	F	ko:K00948	ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
LMDHPJAF_00940	2.9e-254	-	-	-	L	-	-	-	COG2826 Transposase and inactivated derivatives, IS30 family
LMDHPJAF_00941	9.14e-136	-	-	-	S	-	-	-	CAAX protease self-immunity
LMDHPJAF_00942	3.87e-301	aapA	-	-	E	ko:K03293,ko:K11737	-	ko00000,ko02000	Amino acid permease
LMDHPJAF_00943	4.82e-147	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
LMDHPJAF_00944	2.31e-161	-	-	-	-	-	-	-	-
LMDHPJAF_00945	0.0	-	-	-	S	-	-	-	Cysteine-rich secretory protein family
LMDHPJAF_00946	4.53e-264	ddl	6.3.2.4	-	F	ko:K01921	ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Belongs to the D-alanine--D-alanine ligase family
LMDHPJAF_00947	4.87e-134	-	-	-	-	-	-	-	-
LMDHPJAF_00948	0.0	nhaP3	-	-	P	ko:K03316	-	ko00000	Sodium proton antiporter
LMDHPJAF_00949	1.92e-214	yibE	-	-	S	-	-	-	overlaps another CDS with the same product name
LMDHPJAF_00950	3.8e-154	yibF	-	-	S	-	-	-	overlaps another CDS with the same product name
LMDHPJAF_00951	1.4e-195	-	-	-	I	-	-	-	alpha/beta hydrolase fold
LMDHPJAF_00952	0.0	-	-	-	G	-	-	-	Belongs to the glycosyl hydrolase 31 family
LMDHPJAF_00953	4.99e-163	-	-	-	K	ko:K03710	-	ko00000,ko03000	UTRA
LMDHPJAF_00954	2.98e-269	agaS	-	-	G	ko:K02082	-	ko00000,ko01000	SIS domain
LMDHPJAF_00955	3.09e-290	nagA	3.5.1.25	-	G	ko:K01443	ko00520,ko01130,map00520,map01130	ko00000,ko00001,ko01000	Belongs to the metallo-dependent hydrolases superfamily. NagA family
LMDHPJAF_00956	1.13e-108	-	2.7.1.191	-	G	ko:K02794	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system sorbose subfamily IIB component
LMDHPJAF_00957	2.08e-193	-	-	-	G	ko:K02795	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	PTS system sorbose-specific iic component
LMDHPJAF_00958	1.02e-190	-	-	-	G	ko:K02796	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	PTS system mannose/fructose/sorbose family IID component
LMDHPJAF_00959	6.28e-87	-	2.7.1.191	-	G	ko:K02793	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system fructose IIA component
LMDHPJAF_00961	7.93e-213	-	-	-	S	-	-	-	zinc-ribbon domain
LMDHPJAF_00962	1.31e-52	-	-	-	S	-	-	-	MORN repeat protein
LMDHPJAF_00963	0.0	XK27_09800	-	-	I	-	-	-	Acyltransferase family
LMDHPJAF_00966	1.97e-75	-	-	-	L	-	-	-	COG3547 Transposase and inactivated derivatives
LMDHPJAF_00967	2.21e-113	ntd	2.4.2.6	-	F	ko:K08728	ko00240,map00240	ko00000,ko00001,ko01000	Nucleoside
LMDHPJAF_00968	5.05e-128	-	2.7.1.200, 2.7.1.204	-	G	ko:K02773,ko:K20112	ko00052,ko01100,ko02060,map00052,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
LMDHPJAF_00969	5.62e-166	-	-	-	K	-	-	-	UTRA domain
LMDHPJAF_00970	3.56e-191	-	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Tyrosine phosphatase family
LMDHPJAF_00971	6.03e-114	usp5	-	-	T	-	-	-	universal stress protein
LMDHPJAF_00973	1.59e-215	phnD	-	-	P	ko:K02044	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Phosphonate ABC transporter
LMDHPJAF_00974	1.74e-179	phnC	3.6.3.28	-	P	ko:K02041	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
LMDHPJAF_00975	1.42e-168	phnB	-	-	P	ko:K02042	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
LMDHPJAF_00976	8.69e-189	-	-	-	P	ko:K02042	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
LMDHPJAF_00977	9.7e-109	-	-	-	-	-	-	-	-
LMDHPJAF_00978	0.0	-	-	-	S	-	-	-	Calcineurin-like phosphoesterase
LMDHPJAF_00979	0.0	asnB	6.3.5.4	-	E	ko:K01953	ko00250,ko01100,ko01110,map00250,map01100,map01110	ko00000,ko00001,ko01000,ko01002	Asparagine synthase
LMDHPJAF_00980	0.0	yxbA	6.3.1.12	-	S	ko:K17810	-	ko00000,ko01000	ATP-grasp enzyme
LMDHPJAF_00981	0.0	nrdD	1.1.98.6	-	F	ko:K21636	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Ribonucleoside-triphosphate reductase
LMDHPJAF_00982	1.51e-177	nrdG	1.97.1.4	-	O	ko:K04068	-	ko00000,ko01000	Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
LMDHPJAF_00983	3.6e-133	yitW	-	-	S	-	-	-	Iron-sulfur cluster assembly protein
LMDHPJAF_00984	7.03e-289	XK27_04775	-	-	S	ko:K09155	-	ko00000	PAS domain
LMDHPJAF_00985	3.77e-286	yqjV	-	-	EGP	-	-	-	Major Facilitator Superfamily
LMDHPJAF_00986	1.15e-235	lacD	4.1.2.40	-	G	ko:K01635	ko00052,ko01100,ko02024,map00052,map01100,map02024	ko00000,ko00001,ko01000	Belongs to the aldolase LacD family
LMDHPJAF_00987	0.0	-	-	-	D	-	-	-	transport
LMDHPJAF_00988	1.33e-174	rpl	-	-	K	-	-	-	Helix-turn-helix domain, rpiR family
LMDHPJAF_00989	4.05e-213	fruK-1	2.7.1.56	-	H	ko:K00882	ko00051,map00051	ko00000,ko00001,ko01000	pfkB family carbohydrate kinase
LMDHPJAF_00990	0.0	fruC	2.7.1.202	-	GT	ko:K02769,ko:K02770	ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
LMDHPJAF_00991	0.0	pepO	-	-	O	ko:K07386	-	ko00000,ko01000,ko01002	Peptidase family M13
LMDHPJAF_00992	0.0	-	-	-	S	-	-	-	Bacterial membrane protein, YfhO
LMDHPJAF_00993	0.0	pckA	4.1.1.49	-	H	ko:K01610	ko00010,ko00020,ko00620,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00710,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Phosphoenolpyruvate carboxykinase
LMDHPJAF_00994	0.0	kup	-	-	P	ko:K03549	-	ko00000,ko02000	Transport of potassium into the cell
LMDHPJAF_00995	0.0	kup	-	-	P	ko:K03549	-	ko00000,ko02000	Transport of potassium into the cell
LMDHPJAF_00996	2.06e-93	-	-	-	-	-	-	-	-
LMDHPJAF_00997	7.54e-158	-	-	-	-	-	-	-	-
LMDHPJAF_00998	7.98e-45	-	-	-	S	-	-	-	Protein of unknown function (DUF2922)
LMDHPJAF_00999	0.0	-	-	-	NU	-	-	-	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
LMDHPJAF_01000	7.29e-220	-	-	-	-	-	-	-	-
LMDHPJAF_01001	0.0	rsmF	-	-	J	-	-	-	NOL1 NOP2 sun family protein
LMDHPJAF_01002	1.45e-67	ybjQ	-	-	S	-	-	-	Belongs to the UPF0145 family
LMDHPJAF_01003	5.48e-221	-	-	-	S	-	-	-	DUF218 domain
LMDHPJAF_01004	2.67e-183	yxeH	-	-	S	-	-	-	hydrolase
LMDHPJAF_01005	0.0	-	-	-	I	-	-	-	Protein of unknown function (DUF2974)
LMDHPJAF_01006	3.06e-151	pyrE	2.4.2.10	-	F	ko:K00762	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
LMDHPJAF_01007	1.18e-164	pyrF	4.1.1.23	-	F	ko:K01591	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
LMDHPJAF_01008	4.56e-214	pyrD	1.3.1.14, 1.3.98.1	-	F	ko:K00226,ko:K17828	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
LMDHPJAF_01009	5.25e-120	pyrR	2.4.2.9	-	F	ko:K02825	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000,ko03000	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
LMDHPJAF_01010	1.5e-229	pyrB	2.1.3.2	-	F	ko:K00609	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the ATCase OTCase family
LMDHPJAF_01011	1.02e-297	pyrC	3.5.2.3	-	F	ko:K01465	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
LMDHPJAF_01012	8.13e-263	carA	6.3.5.5	-	F	ko:K01956	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthetase glutamine chain
LMDHPJAF_01013	0.0	carB	6.3.5.5	-	F	ko:K01955	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthase
LMDHPJAF_01014	2.21e-116	pyrR	2.4.2.9	-	F	ko:K02825	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000,ko03000	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
LMDHPJAF_01015	1.28e-135	pncA	-	-	Q	-	-	-	Isochorismatase family
LMDHPJAF_01016	0.0	ppc	4.1.1.31	-	H	ko:K01595	ko00620,ko00680,ko00710,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00710,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
LMDHPJAF_01017	1.16e-183	-	-	-	M	-	-	-	Glycosyl transferases group 1
LMDHPJAF_01018	9.16e-09	-	-	-	-	-	-	-	-
LMDHPJAF_01019	0.0	pepO	-	-	O	ko:K07386	-	ko00000,ko01000,ko01002	Peptidase family M13
LMDHPJAF_01020	3.65e-14	-	-	-	C	-	-	-	nitroreductase
LMDHPJAF_01021	3.28e-69	-	-	-	C	-	-	-	nitroreductase
LMDHPJAF_01022	4.82e-37	-	-	-	S	-	-	-	SnoaL-like domain
LMDHPJAF_01023	3.53e-255	glxK	2.7.1.165	-	G	ko:K00865	ko00260,ko00561,ko00630,ko01100,ko01120,ko01130,map00260,map00561,map00630,map01100,map01120,map01130	ko00000,ko00001,ko01000	Belongs to the glycerate kinase type-1 family
LMDHPJAF_01024	6.44e-184	hflC	-	-	O	ko:K04087	-	ko00000,ko00002,ko01000	prohibitin homologues
LMDHPJAF_01025	2.11e-133	hpt	2.4.2.8	-	F	ko:K00760	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the purine pyrimidine phosphoribosyltransferase family
LMDHPJAF_01026	6.58e-293	-	-	-	E	ko:K03294	-	ko00000	amino acid
LMDHPJAF_01027	7.47e-173	lys	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
LMDHPJAF_01028	4.99e-274	yfmL	-	-	L	-	-	-	DEAD DEAH box helicase
LMDHPJAF_01029	0.0	chbC	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
LMDHPJAF_01032	1.01e-272	mnaA	5.1.3.14	-	G	ko:K01791	ko00520,ko01100,ko05111,map00520,map01100,map05111	ko00000,ko00001,ko00002,ko01000,ko01005	Belongs to the UDP-N-acetylglucosamine 2-epimerase family
LMDHPJAF_01033	2.53e-113	gtcA1	-	-	S	-	-	-	Teichoic acid glycosylation protein
LMDHPJAF_01034	7.88e-100	ykuP	-	-	C	ko:K03839	-	ko00000	Flavodoxin
LMDHPJAF_01035	1.21e-206	map	3.4.11.18	-	E	ko:K01265	-	ko00000,ko01000,ko01002	Methionine Aminopeptidase
LMDHPJAF_01036	1.16e-208	rbn	-	-	S	ko:K07058	-	ko00000	Belongs to the UPF0761 family
LMDHPJAF_01037	8.2e-214	galU	2.7.7.9	-	M	ko:K00963	ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	UTP-glucose-1-phosphate uridylyltransferase
LMDHPJAF_01038	4.31e-230	proV	-	-	E	ko:K05847	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter, ATP-binding protein
LMDHPJAF_01039	0.0	-	-	-	EM	ko:K05845,ko:K05846	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Periplasmic glycine betaine choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)
LMDHPJAF_01040	3.59e-88	-	-	-	O	-	-	-	OsmC-like protein
LMDHPJAF_01041	4.12e-104	ltrA	-	-	S	-	-	-	Bacterial low temperature requirement A protein (LtrA)
LMDHPJAF_01042	2.07e-40	ltrA	-	-	S	-	-	-	Bacterial low temperature requirement A protein (LtrA)
LMDHPJAF_01043	4.05e-147	-	-	-	T	-	-	-	Region found in RelA / SpoT proteins
LMDHPJAF_01044	4.12e-149	dltr	-	-	K	-	-	-	response regulator
LMDHPJAF_01045	5.24e-290	sptS	-	-	T	-	-	-	Histidine kinase
LMDHPJAF_01046	0.0	pepX	3.4.14.11	-	E	ko:K01281	-	ko00000,ko01000,ko01002	Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
LMDHPJAF_01047	0.0	pepN	3.4.11.2	-	E	ko:K01256	ko00480,ko01100,map00480,map01100	ko00000,ko00001,ko01000,ko01002	aminopeptidase
LMDHPJAF_01048	8.69e-182	-	-	-	S	-	-	-	haloacid dehalogenase-like hydrolase
LMDHPJAF_01050	0.0	glmS	2.6.1.16	-	M	ko:K00820	ko00250,ko00520,ko01100,ko01130,ko04931,map00250,map00520,map01100,map01130,map04931	ko00000,ko00001,ko01000,ko01002	Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
LMDHPJAF_01051	3.09e-114	-	-	-	S	-	-	-	Phospholipase, patatin family
LMDHPJAF_01052	0.0	glnPH2	-	-	P	ko:K02029,ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter permease
LMDHPJAF_01053	2.29e-166	glnQ	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
LMDHPJAF_01054	4.59e-124	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
LMDHPJAF_01055	5.29e-204	pstS	-	-	P	ko:K02040	ko02010,ko02020,ko05152,map02010,map02020,map05152	ko00000,ko00001,ko00002,ko02000	Phosphate
LMDHPJAF_01056	8.44e-217	pstC	-	-	P	ko:K02037	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	probably responsible for the translocation of the substrate across the membrane
LMDHPJAF_01057	1.68e-199	pstA	-	-	P	ko:K02038	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Phosphate transport system permease protein PstA
LMDHPJAF_01058	5.46e-190	pstB2	3.6.3.27	-	P	ko:K02036	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
LMDHPJAF_01059	2.31e-179	pstB1	3.6.3.27	-	P	ko:K02036	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
LMDHPJAF_01060	1.67e-151	phoU	-	-	P	ko:K02039	-	ko00000	Plays a role in the regulation of phosphate uptake
LMDHPJAF_01061	2.19e-61	yvbK	-	-	K	-	-	-	COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
LMDHPJAF_01062	0.0	-	-	-	S	-	-	-	C4-dicarboxylate anaerobic carrier
LMDHPJAF_01063	1.91e-108	dps	-	-	P	ko:K04047	-	ko00000,ko03036	Belongs to the Dps family
LMDHPJAF_01064	6.42e-210	rbsK	2.7.1.15	-	H	ko:K00852	ko00030,map00030	ko00000,ko00001,ko01000	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LMDHPJAF_01065	5.22e-162	rpiA	5.3.1.6	-	G	ko:K01807	ko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
LMDHPJAF_01066	3.8e-222	rihC	3.2.2.1	-	F	ko:K01239,ko:K01250,ko:K12700	ko00230,ko00760,ko01100,map00230,map00760,map01100	ko00000,ko00001,ko01000	Nucleoside
LMDHPJAF_01067	9.37e-170	gntR	-	-	K	-	-	-	UbiC transcription regulator-associated domain protein
LMDHPJAF_01068	1.14e-59	-	-	-	S	-	-	-	Enterocin A Immunity
LMDHPJAF_01069	5.8e-174	-	-	-	K	ko:K22103	-	ko00000,ko03000	DeoR C terminal sensor domain
LMDHPJAF_01070	7.02e-24	yceE	-	-	Q	-	-	-	phosphatase activity
LMDHPJAF_01071	1.26e-09	yhaX	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
LMDHPJAF_01072	0.0	xfp	4.1.2.22, 4.1.2.9	-	G	ko:K01621	ko00030,ko00710,ko01100,ko01120,map00030,map00710,map01100,map01120	ko00000,ko00001,ko01000	Phosphoketolase
LMDHPJAF_01073	1.1e-147	-	-	-	C	-	-	-	nitroreductase
LMDHPJAF_01074	7.19e-166	-	-	-	-	-	-	-	-
LMDHPJAF_01075	2.84e-301	yhdP	-	-	S	-	-	-	Transporter associated domain
LMDHPJAF_01076	6.08e-40	cas1	-	-	L	ko:K15342	-	ko00000,ko02048,ko03400	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
LMDHPJAF_01077	1.79e-29	cas1	-	-	L	ko:K15342	-	ko00000,ko02048,ko03400	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
LMDHPJAF_01078	0.0	cas9	-	-	L	ko:K09952	-	ko00000,ko01000,ko02048	CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
LMDHPJAF_01079	2.96e-241	rfbD	1.1.1.133	-	M	ko:K00067	ko00521,ko00523,ko01130,map00521,map00523,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
LMDHPJAF_01080	1.21e-152	rfbC	5.1.3.13	-	M	ko:K01790	ko00521,ko00523,ko01130,map00521,map00523,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
LMDHPJAF_01081	5.11e-209	rfbA	2.7.7.24	-	H	ko:K00973	ko00521,ko00523,ko00525,ko01130,map00521,map00523,map00525,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
LMDHPJAF_01082	1.8e-261	rfbB	4.2.1.46	-	M	ko:K01710	ko00521,ko00523,ko00525,ko01055,ko01130,map00521,map00523,map00525,map01055,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
LMDHPJAF_01083	2.13e-245	-	-	-	KQ	-	-	-	helix_turn_helix, mercury resistance
LMDHPJAF_01085	1.04e-84	-	-	-	-	-	-	-	-
LMDHPJAF_01086	4.01e-32	-	-	-	-	-	-	-	-
LMDHPJAF_01087	4.01e-84	XK27_01125	-	-	L	ko:K07484	-	ko00000	PFAM IS66 Orf2 family protein
LMDHPJAF_01088	5.51e-46	-	-	-	S	-	-	-	Transposase C of IS166 homeodomain
LMDHPJAF_01089	2.22e-312	-	-	-	L	ko:K07484	-	ko00000	Transposase IS66 family
LMDHPJAF_01106	8.65e-81	-	-	-	-	-	-	-	-
LMDHPJAF_01118	3.7e-279	-	2.4.1.337	GT4	M	ko:K19002	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000,ko01003	Glycosyl transferase 4-like domain
LMDHPJAF_01119	1.88e-249	cpoA	2.4.1.208	GT4	M	ko:K13677,ko:K13678	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000,ko01003	Glycosyltransferase, group 1 family protein
LMDHPJAF_01120	2.12e-230	mprF	-	-	S	ko:K07027	-	ko00000,ko02000	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
LMDHPJAF_01121	0.0	ltaS	2.7.8.20	-	M	ko:K19005	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
LMDHPJAF_01122	2.83e-203	nlaXM	2.1.1.37	-	H	ko:K00558	ko00270,ko01100,ko05206,map00270,map01100,map05206	ko00000,ko00001,ko00002,ko01000,ko02048,ko03032,ko03036	cytosine-specific methyltransferase
LMDHPJAF_01123	5.72e-129	-	-	-	S	-	-	-	NgoFVII restriction endonuclease
LMDHPJAF_01125	1.4e-54	-	-	-	S	-	-	-	Lysin motif
LMDHPJAF_01126	2.34e-153	nicK	-	-	L	ko:K07467	-	ko00000	Replication initiation factor
LMDHPJAF_01127	3.34e-45	-	-	-	L	ko:K03111	ko03030,ko03430,ko03440,map03030,map03430,map03440	ko00000,ko00001,ko03029,ko03032,ko03400	Single-strand binding protein family
LMDHPJAF_01128	1.87e-115	-	-	-	L	-	-	-	Phage integrase, N-terminal SAM-like domain
LMDHPJAF_01129	1.98e-24	-	-	-	-	-	-	-	-
LMDHPJAF_01130	1.59e-10	-	-	-	S	-	-	-	Protein of unknown function (DUF2922)
LMDHPJAF_01132	2.69e-182	soj	-	-	D	-	-	-	CobQ CobB MinD ParA nucleotide binding domain protein
LMDHPJAF_01133	6.05e-47	-	-	-	-	-	-	-	-
LMDHPJAF_01134	0.0	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
LMDHPJAF_01135	3.87e-136	-	-	-	D	-	-	-	Domain of Unknown Function (DUF1542)
LMDHPJAF_01136	3.46e-123	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
LMDHPJAF_01137	0.0	-	-	-	S	-	-	-	Protein of unknown function DUF262
LMDHPJAF_01138	1.92e-56	-	-	-	L	-	-	-	helicase
LMDHPJAF_01139	2.41e-81	-	-	-	-	-	-	-	-
LMDHPJAF_01140	0.0	ppx3	3.6.1.11, 3.6.1.40	-	FP	ko:K01524	ko00230,map00230	ko00000,ko00001,ko01000	exopolyphosphatase
LMDHPJAF_01141	0.0	ppk	2.7.4.1	-	P	ko:K00937	ko00190,ko03018,map00190,map03018	ko00000,ko00001,ko01000,ko03019	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
LMDHPJAF_01142	0.0	-	-	-	S	ko:K13730	ko05100,map05100	ko00000,ko00001	Uncharacterized protein conserved in bacteria (DUF2252)
LMDHPJAF_01143	8.97e-224	ppx	3.6.1.11, 3.6.1.40	-	FP	ko:K01524	ko00230,map00230	ko00000,ko00001,ko01000	exopolyphosphatase
LMDHPJAF_01144	4.35e-140	-	-	-	S	-	-	-	Rib/alpha-like repeat
LMDHPJAF_01145	1.35e-85	-	-	-	S	-	-	-	Domain of unknown function DUF1828
LMDHPJAF_01146	8.56e-90	-	-	-	-	-	-	-	-
LMDHPJAF_01147	2.29e-59	-	-	-	-	-	-	-	-
LMDHPJAF_01148	3.49e-102	-	3.6.1.55	-	F	ko:K03574	-	ko00000,ko01000,ko03400	NUDIX domain
LMDHPJAF_01149	1.33e-161	-	-	-	-	-	-	-	-
LMDHPJAF_01151	7.89e-182	htpX	-	-	O	ko:K03799	-	ko00000,ko00002,ko01000,ko01002	Peptidase family M48
LMDHPJAF_01152	2.8e-92	-	-	-	S	-	-	-	HIRAN
LMDHPJAF_01154	3.38e-13	-	-	-	-	-	-	-	-
LMDHPJAF_01156	0.0	-	-	-	E	ko:K03294	-	ko00000	Amino Acid
LMDHPJAF_01157	0.0	clpE	-	-	O	ko:K03697,ko:K04086	-	ko00000,ko03110	AAA domain (Cdc48 subfamily)
LMDHPJAF_01158	2.19e-215	-	-	-	S	-	-	-	Alpha/beta hydrolase of unknown function (DUF915)
LMDHPJAF_01159	6.27e-306	pts13C	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
LMDHPJAF_01160	7.08e-52	-	-	-	-	-	-	-	-
LMDHPJAF_01161	3.8e-273	-	-	-	E	-	-	-	Major Facilitator Superfamily
LMDHPJAF_01162	2.37e-178	pbpX2	-	-	V	-	-	-	Beta-lactamase
LMDHPJAF_01163	0.0	dltD	-	-	M	ko:K03740	ko01503,ko02020,ko05150,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01504	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
LMDHPJAF_01164	5.16e-50	dltC	6.1.1.13	-	J	ko:K14188	ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01000,ko01504	Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
LMDHPJAF_01165	3.86e-302	dltB	-	-	M	ko:K03739	ko01503,ko02020,ko05150,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01504	MBOAT, membrane-bound O-acyltransferase family
LMDHPJAF_01166	0.0	dltA	6.1.1.13	-	H	ko:K03367	ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01000,ko01504	Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
LMDHPJAF_01167	9.7e-07	dltX	-	-	S	-	-	-	D-Ala-teichoic acid biosynthesis protein
LMDHPJAF_01168	1.02e-50	-	-	-	-	-	-	-	-
LMDHPJAF_01169	1.73e-270	-	-	-	S	-	-	-	Membrane
LMDHPJAF_01171	2.41e-55	-	-	-	-	-	-	-	-
LMDHPJAF_01172	1.66e-101	ykuL	-	-	S	-	-	-	(CBS) domain
LMDHPJAF_01173	0.0	cadA	-	-	P	-	-	-	P-type ATPase
LMDHPJAF_01174	1.48e-252	napA	-	-	P	-	-	-	Sodium/hydrogen exchanger family
LMDHPJAF_01176	0.0	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC transporter transmembrane region
LMDHPJAF_01177	2.3e-200	mutR	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
LMDHPJAF_01178	3.44e-38	-	-	-	-	-	-	-	-
LMDHPJAF_01180	2.56e-38	-	-	-	-	-	-	-	-
LMDHPJAF_01181	9.83e-91	ywdE	-	-	K	ko:K20375	ko02024,map02024	ko00000,ko00001,ko03000	Transcriptional regulator
LMDHPJAF_01182	7.77e-151	pcp	3.4.19.3	-	O	ko:K01304	-	ko00000,ko01000,ko01002	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
LMDHPJAF_01183	1.95e-199	-	-	-	S	-	-	-	Protein of unknown function (DUF979)
LMDHPJAF_01184	6.46e-146	-	-	-	S	-	-	-	Protein of unknown function (DUF969)
LMDHPJAF_01185	1.12e-99	yhaH	-	-	S	-	-	-	Protein of unknown function (DUF805)
LMDHPJAF_01188	8.35e-274	-	-	-	G	ko:K02775	ko00052,ko01100,ko02060,map00052,map01100,map02060	ko00000,ko00001,ko00002,ko02000	PTS system sugar-specific permease component
LMDHPJAF_01189	0.0	-	-	-	G	ko:K02775	ko00052,ko01100,ko02060,map00052,map01100,map02060	ko00000,ko00001,ko00002,ko02000	PTS system Galactitol-specific IIC component
LMDHPJAF_01190	1.25e-120	-	-	-	S	ko:K08996	-	ko00000	Protein of unknown function (DUF1440)
LMDHPJAF_01191	2.17e-132	-	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
LMDHPJAF_01192	3.26e-254	-	-	-	S	-	-	-	DUF218 domain
LMDHPJAF_01193	0.0	-	-	-	V	ko:K02003,ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
LMDHPJAF_01194	0.0	cydA	1.10.3.14	-	C	ko:K00425	ko00190,ko01100,ko02020,map00190,map01100,map02020	ko00000,ko00001,ko00002,ko01000	ubiquinol oxidase
LMDHPJAF_01195	8.65e-231	cydB	1.10.3.14	-	C	ko:K00426	ko00190,ko01100,ko02020,map00190,map01100,map02020	ko00000,ko00001,ko00002,ko01000	Cytochrome d ubiquinol oxidase subunit II
LMDHPJAF_01196	0.0	cydC	-	-	CO	ko:K16013	ko02010,map02010	ko00000,ko00001,ko02000	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
LMDHPJAF_01197	0.0	cydD	-	-	CO	ko:K16012	ko02010,map02010	ko00000,ko00001,ko02000	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
LMDHPJAF_01198	5.08e-219	menA	2.5.1.74	-	H	ko:K02548	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01006	1,4-dihydroxy-2-naphthoate
LMDHPJAF_01199	1.56e-286	-	-	-	G	ko:K02027	-	ko00000,ko00002,ko02000	Bacterial extracellular solute-binding protein
LMDHPJAF_01200	2.85e-214	phnD	-	-	P	ko:K02044	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter, phosphonate, periplasmic substrate-binding protein
LMDHPJAF_01201	1.46e-243	tcsA	-	-	S	ko:K02058,ko:K07335	-	ko00000,ko00002,ko02000	ABC transporter substrate-binding protein PnrA-like
LMDHPJAF_01202	0.0	-	-	-	L	-	-	-	Transposase
LMDHPJAF_01203	1.23e-191	-	-	-	V	-	-	-	Beta-lactamase
LMDHPJAF_01204	9.36e-304	pts29C	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
LMDHPJAF_01205	8.39e-150	gspK	-	-	G	-	-	-	BadF/BadG/BcrA/BcrD ATPase family
LMDHPJAF_01206	2.18e-247	-	-	-	S	ko:K09963	-	ko00000	Bacterial protein of unknown function (DUF871)
LMDHPJAF_01207	1.38e-132	-	-	-	S	-	-	-	Putative esterase
LMDHPJAF_01208	3.09e-208	ykfB	5.1.1.20	-	M	ko:K19802	-	ko00000,ko01000	Belongs to the mandelate racemase muconate lactonizing enzyme family
LMDHPJAF_01209	1.79e-122	-	3.5.2.6	-	V	ko:K17836	ko00311,ko01130,ko01501,map00311,map01130,map01501	ko00000,ko00001,ko00002,ko01000,ko01504	Beta-lactamase enzyme family
LMDHPJAF_01210	4.44e-169	murQ	4.2.1.126	-	G	ko:K07106	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
LMDHPJAF_01211	5.75e-164	-	-	-	S	ko:K07090	-	ko00000	membrane transporter protein
LMDHPJAF_01212	1.58e-200	-	-	-	S	-	-	-	Aldo/keto reductase family
LMDHPJAF_01213	6.36e-171	nagB	3.5.99.6	-	G	ko:K02564	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
LMDHPJAF_01214	1.15e-152	dak	2.7.1.76	-	F	ko:K10353	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000	deoxynucleoside kinase
LMDHPJAF_01215	2.81e-160	dgk2	2.7.1.76	-	F	ko:K10353	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000	deoxynucleoside kinase
LMDHPJAF_01216	6.91e-302	lctO	1.13.12.4	-	C	ko:K00467,ko:K10530	ko00620,map00620	ko00000,ko00001,ko01000	L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases
LMDHPJAF_01217	1.89e-294	pbuG	-	-	S	ko:K06901	-	ko00000,ko02000	permease
LMDHPJAF_01218	6.5e-162	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
LMDHPJAF_01219	2.73e-294	pbuG	-	-	S	ko:K06901	-	ko00000,ko02000	permease
LMDHPJAF_01220	1.52e-58	-	-	-	I	-	-	-	bis(5'-adenosyl)-triphosphatase activity
LMDHPJAF_01221	1.07e-292	pbuG	-	-	S	ko:K06901	-	ko00000,ko02000	permease
LMDHPJAF_01222	2.9e-21	-	-	-	K	-	-	-	Bacteriophage CI repressor helix-turn-helix domain
LMDHPJAF_01223	6.17e-54	-	-	-	K	-	-	-	Bacteriophage CI repressor helix-turn-helix domain
LMDHPJAF_01224	9.88e-91	def2	3.5.1.88	-	J	ko:K01462	-	ko00000,ko01000	Removes the formyl group from the N-terminal Met of newly synthesized proteins
LMDHPJAF_01225	1.58e-38	-	-	-	-	-	-	-	-
LMDHPJAF_01226	1.25e-114	-	-	-	-	-	-	-	-
LMDHPJAF_01227	4.43e-95	atkY	-	-	K	ko:K02171	ko01501,map01501	ko00000,ko00001,ko00002,ko01504,ko03000	Penicillinase repressor
LMDHPJAF_01228	8.46e-84	-	-	-	S	-	-	-	Cupredoxin-like domain
LMDHPJAF_01229	7.67e-66	-	-	-	S	-	-	-	Cupredoxin-like domain
LMDHPJAF_01230	0.0	copA	3.6.3.3, 3.6.3.5, 3.6.3.54	-	P	ko:K01534,ko:K17686	ko01524,ko04016,map01524,map04016	ko00000,ko00001,ko01000	P-type ATPase
LMDHPJAF_01231	0.0	-	-	-	E	-	-	-	Amino acid permease
LMDHPJAF_01232	0.0	speA	4.1.1.17, 4.1.1.18, 4.1.1.19	-	E	ko:K01581,ko:K01582,ko:K01585	ko00310,ko00330,ko00480,ko00960,ko01100,ko01110,ko01130,map00310,map00330,map00480,map00960,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Orn/Lys/Arg decarboxylase, C-terminal domain
LMDHPJAF_01233	4.62e-313	ynbB	-	-	P	-	-	-	aluminum resistance
LMDHPJAF_01234	4.59e-87	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
LMDHPJAF_01235	1.58e-287	-	-	-	EGP	ko:K08368	-	ko00000,ko02000	Sugar (and other) transporter
LMDHPJAF_01236	1.8e-86	-	-	-	S	-	-	-	Iron-sulphur cluster biosynthesis
LMDHPJAF_01237	0.0	mutS1	-	-	L	ko:K07456	ko03430,map03430	ko00000,ko00001,ko03400	Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
LMDHPJAF_01238	0.0	eriC	-	-	P	ko:K03281	-	ko00000	chloride
LMDHPJAF_01239	0.0	gnd	1.1.1.343, 1.1.1.44	-	H	ko:K00033	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
LMDHPJAF_01240	0.0	pox1	1.2.3.3	-	EH	ko:K00158	ko00620,ko01100,map00620,map01100	ko00000,ko00001,ko01000	Belongs to the TPP enzyme family
LMDHPJAF_01241	0.0	gidA	-	-	D	ko:K03495	-	ko00000,ko03016,ko03036	NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
LMDHPJAF_01242	0.0	mnmE	-	-	S	ko:K03650	-	ko00000,ko01000,ko03016	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
LMDHPJAF_01243	4.86e-201	yidC	-	-	U	ko:K03217	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044,ko03029	Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
LMDHPJAF_01244	1.48e-78	rnpA	3.1.26.5	-	J	ko:K03536	-	ko00000,ko01000,ko03016	RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
LMDHPJAF_01245	6.59e-23	rpmH	-	-	J	ko:K02914	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL34 family
LMDHPJAF_01246	0.0	dnaA	-	-	L	ko:K02313	ko02020,ko04112,map02020,map04112	ko00000,ko00001,ko03032,ko03036	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
LMDHPJAF_01247	3.59e-264	dnaN	2.7.7.7	-	L	ko:K02338	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
LMDHPJAF_01248	6.47e-266	recF	-	-	L	ko:K03629	ko03440,map03440	ko00000,ko00001,ko03400	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
LMDHPJAF_01249	0.0	gyrB	5.99.1.3	-	L	ko:K02470	-	ko00000,ko01000,ko03032,ko03400	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
LMDHPJAF_01250	0.0	gyrA	5.99.1.3	-	L	ko:K02469	-	ko00000,ko01000,ko03032,ko03400	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
LMDHPJAF_01251	4.55e-64	rpsF	-	-	J	ko:K02990	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Binds together with S18 to 16S ribosomal RNA
LMDHPJAF_01252	5.89e-109	ssb	-	-	L	ko:K03111	ko03030,ko03430,ko03440,map03030,map03430,map03440	ko00000,ko00001,ko03029,ko03032,ko03400	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
LMDHPJAF_01253	1.33e-47	rpsR	-	-	J	ko:K02963	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
LMDHPJAF_01254	1.66e-215	corA	-	-	P	ko:K03284	-	ko00000,ko02000	CorA-like Mg2+ transporter protein
LMDHPJAF_01255	0.0	yybT	-	-	T	-	-	-	signaling protein consisting of a modified GGDEF domain and a DHH domain
LMDHPJAF_01256	8.13e-99	rplI	-	-	J	ko:K02939	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to the 23S rRNA
LMDHPJAF_01257	0.0	dnaB	3.6.4.12	-	L	ko:K02314	ko03030,ko04112,map03030,map04112	ko00000,ko00001,ko01000,ko03032	Participates in initiation and elongation during chromosome replication
LMDHPJAF_01258	2.11e-217	scrK	2.7.1.4	-	GK	ko:K00847	ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100	ko00000,ko00001,ko01000	ROK family
LMDHPJAF_01259	1.82e-275	-	-	-	I	-	-	-	Protein of unknown function (DUF2974)
LMDHPJAF_01260	0.0	-	-	-	-	-	-	-	-
LMDHPJAF_01262	1.8e-306	steT	-	-	E	ko:K03294	-	ko00000	amino acid
LMDHPJAF_01264	4.66e-125	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
LMDHPJAF_01265	4.86e-24	lysA2	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
LMDHPJAF_01271	2.9e-254	-	-	-	L	-	-	-	COG2826 Transposase and inactivated derivatives, IS30 family
LMDHPJAF_01272	9.16e-11	-	-	-	S	-	-	-	HicB_like antitoxin of bacterial toxin-antitoxin system
LMDHPJAF_01273	2.23e-171	gpmA	5.4.2.11	-	G	ko:K01834	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
LMDHPJAF_01274	9.42e-95	XK27_04775	-	-	S	ko:K09155	-	ko00000	PAS domain
LMDHPJAF_01275	3.36e-184	-	-	-	-	-	-	-	-
LMDHPJAF_01276	4.25e-175	-	-	-	-	-	-	-	-
LMDHPJAF_01277	1.32e-224	-	-	-	S	-	-	-	Oxidoreductase family, NAD-binding Rossmann fold
LMDHPJAF_01278	0.0	yjbQ	-	-	P	ko:K03455,ko:K03499	-	ko00000,ko02000	TrkA C-terminal domain protein
LMDHPJAF_01279	2.19e-182	-	2.7.1.56	-	G	ko:K00882	ko00051,map00051	ko00000,ko00001,ko01000	pfkB family carbohydrate kinase
LMDHPJAF_01280	0.0	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
LMDHPJAF_01281	3.18e-209	-	2.7.1.191	-	G	ko:K02793,ko:K02794	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system sorbose subfamily IIB component
LMDHPJAF_01282	3.23e-179	-	-	-	G	ko:K02795	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	PTS system sorbose-specific iic component
LMDHPJAF_01283	2.38e-152	-	-	-	G	ko:K02796	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	PTS system mannose/fructose/sorbose family IID component
LMDHPJAF_01284	5.46e-259	-	-	-	L	-	-	-	COG2826 Transposase and inactivated derivatives, IS30 family
LMDHPJAF_01285	1.11e-261	-	-	-	S	ko:K03328	-	ko00000	Membrane protein involved in the export of O-antigen and teichoic acid
LMDHPJAF_01286	9.58e-30	-	-	-	L	-	-	-	PFAM transposase, IS4 family protein
LMDHPJAF_01287	1.73e-96	-	-	-	L	-	-	-	PFAM transposase, IS4 family protein
LMDHPJAF_01289	2.23e-41	-	-	-	-	-	-	-	-
LMDHPJAF_01290	2.26e-96	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
LMDHPJAF_01295	2.18e-269	metK	2.5.1.6	-	H	ko:K00789	ko00270,ko01100,ko01110,ko01230,map00270,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
LMDHPJAF_01296	0.0	mdr	-	-	EGP	-	-	-	Major Facilitator
LMDHPJAF_01297	1.26e-47	cas1	-	-	L	ko:K15342	-	ko00000,ko02048,ko03400	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
LMDHPJAF_01298	1.51e-56	cas2	-	-	L	ko:K09951	-	ko00000,ko02048	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
LMDHPJAF_01299	3.9e-99	-	-	-	S	-	-	-	CRISPR-associated protein (Cas_Csn2)
LMDHPJAF_01300	0.0	ydiF	-	-	S	ko:K06158	-	ko00000,ko03012	ABC transporter, ATP-binding protein
LMDHPJAF_01301	4.94e-37	-	-	-	L	ko:K07483	-	ko00000	transposase activity
LMDHPJAF_01302	2.68e-131	-	-	-	L	ko:K07497	-	ko00000	PFAM Integrase catalytic region
LMDHPJAF_01303	4.59e-73	tnpA1	-	-	L	-	-	-	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
LMDHPJAF_01304	6.5e-134	-	-	-	L	-	-	-	COG3547 Transposase and inactivated derivatives
LMDHPJAF_01305	1.98e-204	-	-	-	L	-	-	-	Transposase
LMDHPJAF_01306	1.4e-122	apt	2.4.2.7	-	F	ko:K00759	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000,ko04147	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
LMDHPJAF_01307	0.0	recJ	-	-	L	ko:K07462	ko03410,ko03430,ko03440,map03410,map03430,map03440	ko00000,ko00001,ko01000,ko03400	Single-stranded-DNA-specific exonuclease RecJ
LMDHPJAF_01308	3.14e-157	srtA	3.4.22.70	-	M	ko:K07284	-	ko00000,ko01000,ko01002,ko01011	sortase family
LMDHPJAF_01309	0.0	lepA	-	-	M	ko:K03596	ko05134,map05134	ko00000,ko00001	Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
LMDHPJAF_01310	3.71e-247	dnaJ	-	-	O	ko:K03686	-	ko00000,ko03029,ko03110	ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
LMDHPJAF_01311	0.0	dnaK	-	-	O	ko:K04043	ko03018,ko04212,ko05152,map03018,map04212,map05152	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	Heat shock 70 kDa protein
LMDHPJAF_01312	2.77e-110	grpE	-	-	O	ko:K03687	-	ko00000,ko03029,ko03110	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
LMDHPJAF_01313	1.08e-246	hrcA	-	-	K	ko:K03705	-	ko00000,ko03000	Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
LMDHPJAF_01314	8e-65	-	-	-	S	-	-	-	GyrI-like small molecule binding domain
LMDHPJAF_01315	1.87e-52	-	-	-	S	-	-	-	GyrI-like small molecule binding domain
LMDHPJAF_01316	0.0	yjcA	-	-	S	ko:K19350	ko02010,map02010	ko00000,ko00001,ko01504,ko02000	ABC transporter
LMDHPJAF_01317	1.13e-221	ribF	2.7.1.26, 2.7.7.2	-	H	ko:K11753	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Belongs to the ribF family
LMDHPJAF_01318	2.01e-212	truB	5.4.99.25	-	J	ko:K03177,ko:K03483	-	ko00000,ko01000,ko03000,ko03016	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
LMDHPJAF_01319	4.75e-80	rbfA	-	-	J	ko:K02834	-	ko00000,ko03009	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
LMDHPJAF_01320	0.0	infB	-	-	J	ko:K02519	-	ko00000,ko03012,ko03029	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
LMDHPJAF_01321	1.32e-63	-	-	-	J	-	-	-	ribosomal protein
LMDHPJAF_01322	1.08e-62	ylxR	-	-	K	ko:K07742	-	ko00000	Protein of unknown function (DUF448)
LMDHPJAF_01323	4.04e-273	nusA	-	-	K	ko:K02600	-	ko00000,ko03009,ko03021	Participates in both transcription termination and antitermination
LMDHPJAF_01324	6.86e-108	rimP	-	-	J	ko:K09748	-	ko00000,ko03009	Required for maturation of 30S ribosomal subunits
LMDHPJAF_01325	0.0	polC	2.7.7.7	-	L	ko:K03763	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
LMDHPJAF_01326	0.0	proS	6.1.1.15	-	J	ko:K01881	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
LMDHPJAF_01327	1.28e-292	rseP	-	-	M	ko:K11749	ko02024,ko04112,map02024,map04112	ko00000,ko00001,ko01000,ko01002	zinc metalloprotease
LMDHPJAF_01328	3.37e-178	cdsA	2.7.7.41	-	S	ko:K00981	ko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070	ko00000,ko00001,ko00002,ko01000	Belongs to the CDS family
LMDHPJAF_01329	5.91e-176	uppS	2.5.1.31	-	H	ko:K00806	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
LMDHPJAF_01330	2.02e-120	frr	-	-	J	ko:K02838	-	ko00000,ko03012	Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
LMDHPJAF_01331	1.44e-168	pyrH	2.7.4.22	-	F	ko:K09903	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphorylation of UMP to UDP
LMDHPJAF_01332	8.74e-236	tsf	-	-	J	ko:K02357	-	ko00000,ko03012,ko03029	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
LMDHPJAF_01333	2.12e-180	rpsB	-	-	J	ko:K02967	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uS2 family
LMDHPJAF_01334	7.33e-248	yabB	2.1.1.223	-	L	ko:K07461,ko:K15460	-	ko00000,ko01000,ko03016	Methyltransferase small domain
LMDHPJAF_01335	1.16e-151	plsC	2.3.1.51	-	I	ko:K00655	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Acyltransferase
LMDHPJAF_01336	2.1e-292	cfa	2.1.1.79	-	M	ko:K00574	-	ko00000,ko01000	cyclopropane-fatty-acyl-phospholipid synthase
LMDHPJAF_01337	0.0	mdlB	-	-	V	ko:K06147,ko:K18890	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
LMDHPJAF_01338	0.0	mdlA	-	-	V	ko:K06148,ko:K18889	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
LMDHPJAF_01339	4.85e-41	XK26_06720	-	-	S	ko:K09976	-	ko00000	Uncharacterised protein family (UPF0154)
LMDHPJAF_01340	1.99e-44	ynzC	-	-	S	-	-	-	UPF0291 protein
LMDHPJAF_01341	7.82e-147	lexA	3.4.21.88	-	K	ko:K01356	-	ko00000,ko00002,ko01000,ko01002,ko03400	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
LMDHPJAF_01342	8.42e-149	ung2	3.2.2.27	-	L	ko:K21929	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Uracil-DNA glycosylase
LMDHPJAF_01343	8.4e-93	apfA	3.6.1.61	-	F	ko:K18445	ko00230,map00230	ko00000,ko00001,ko01000	Nudix hydrolase
LMDHPJAF_01344	7.78e-150	sipS3	3.4.21.89	-	U	ko:K03100	ko02024,ko03060,map02024,map03060	ko00000,ko00001,ko01000,ko01002	Belongs to the peptidase S26 family
LMDHPJAF_01345	2.61e-76	rplS	-	-	J	ko:K02884	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
LMDHPJAF_01346	1.24e-173	trmD	2.1.1.228	-	J	ko:K00554	-	ko00000,ko01000,ko03016	Belongs to the RNA methyltransferase TrmD family
LMDHPJAF_01347	2.07e-123	rimM	-	-	J	ko:K02860	-	ko00000,ko03009	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
LMDHPJAF_01348	4.59e-58	rpsP	-	-	J	ko:K02959	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Belongs to the bacterial ribosomal protein bS16 family
LMDHPJAF_01349	5.7e-291	ffh	3.6.5.4	-	U	ko:K03106	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko01000,ko02044	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
LMDHPJAF_01350	3.48e-75	ylxM	-	-	S	ko:K09787	-	ko00000	Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
LMDHPJAF_01351	0.0	pepD2	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
LMDHPJAF_01352	3.88e-255	ftsY	-	-	U	ko:K03110	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
LMDHPJAF_01353	0.0	smc	-	-	D	ko:K03529	-	ko00000,ko03036	Required for chromosome condensation and partitioning
LMDHPJAF_01354	7.14e-157	rnc	3.1.26.3	-	J	ko:K03685	ko03008,ko05205,map03008,map05205	ko00000,ko00001,ko01000,ko03009,ko03019,ko03036	Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
LMDHPJAF_01355	0.0	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
LMDHPJAF_01356	0.0	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
LMDHPJAF_01357	2.15e-206	oppC5	-	-	P	ko:K02034	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
LMDHPJAF_01358	1.01e-228	oppB	-	-	P	ko:K02033,ko:K02034	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
LMDHPJAF_01359	1.33e-225	oppF	-	-	P	ko:K02032	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
LMDHPJAF_01360	2.01e-243	oppD	-	-	P	ko:K02031	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
LMDHPJAF_01361	1.53e-47	acpP	-	-	IQ	ko:K02078	-	ko00000,ko00001	Carrier of the growing fatty acid chain in fatty acid biosynthesis
LMDHPJAF_01362	5.86e-230	plsX	2.3.1.15	-	I	ko:K03621	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
LMDHPJAF_01363	0.0	recG	3.6.4.12	-	L	ko:K03655	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
LMDHPJAF_01364	0.0	yloV	-	-	S	ko:K07030	-	ko00000	DAK2 domain fusion protein YloV
LMDHPJAF_01365	8.29e-75	yloU	-	-	S	-	-	-	Asp23 family, cell envelope-related function
LMDHPJAF_01366	6.36e-34	rpmB	-	-	J	ko:K02902	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL28 family
LMDHPJAF_01367	8.36e-154	thiN	2.7.6.2	-	H	ko:K00949	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000	thiamine pyrophosphokinase
LMDHPJAF_01368	1.29e-154	rpe	5.1.3.1	-	G	ko:K01783	ko00030,ko00040,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the ribulose-phosphate 3-epimerase family
LMDHPJAF_01369	5.93e-205	rsgA	3.1.3.100	-	S	ko:K06949	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000,ko03009	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
LMDHPJAF_01370	0.0	prkC	2.7.11.1	-	KLT	ko:K08884,ko:K12132	-	ko00000,ko01000,ko01001	serine threonine protein kinase
LMDHPJAF_01371	1.29e-180	stp	3.1.3.16	-	T	ko:K20074	-	ko00000,ko01000,ko01009	phosphatase
LMDHPJAF_01372	6.72e-301	sun	2.1.1.176	-	J	ko:K03500	-	ko00000,ko01000,ko03009	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
LMDHPJAF_01373	3.11e-220	fmt	2.1.2.9	-	J	ko:K00604	ko00670,ko00970,map00670,map00970	ko00000,ko00001,ko01000	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
LMDHPJAF_01374	0.0	priA	-	-	L	ko:K04066	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
LMDHPJAF_01375	3.3e-43	rpoZ	2.7.7.6	-	K	ko:K03060	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
LMDHPJAF_01376	1.46e-145	gmk	2.7.4.8	-	F	ko:K00942	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko00002,ko01000	Essential for recycling GMP and indirectly, cGMP
LMDHPJAF_01377	7.04e-63	-	-	-	-	-	-	-	-
LMDHPJAF_01378	0.0	recN	-	-	L	ko:K03631	-	ko00000,ko03400	May be involved in recombinational repair of damaged DNA
LMDHPJAF_01379	2.07e-196	rrmJ	2.1.1.226, 2.1.1.227	-	J	ko:K06442	-	ko00000,ko01000,ko03009	Ribosomal RNA large subunit methyltransferase J
LMDHPJAF_01380	2.53e-206	ispA	2.5.1.1, 2.5.1.10, 2.5.1.29	-	H	ko:K13789	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko01006	Belongs to the FPP GGPP synthase family
LMDHPJAF_01381	2.74e-46	xseB	3.1.11.6	-	L	ko:K03602	ko03430,map03430	ko00000,ko00001,ko01000,ko03400	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
LMDHPJAF_01382	0.0	xseA	3.1.11.6	-	L	ko:K03601	ko03430,map03430	ko00000,ko00001,ko01000,ko03400	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
LMDHPJAF_01383	3.39e-192	folD	1.5.1.5, 3.5.4.9	-	F	ko:K01491	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
LMDHPJAF_01384	1e-88	nusB	-	-	K	ko:K03625	-	ko00000,ko03009,ko03021	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
LMDHPJAF_01385	7.32e-95	WQ51_04310	-	-	S	ko:K10947	-	ko00000,ko03000	Asp23 family, cell envelope-related function
LMDHPJAF_01386	4.97e-132	efp	-	-	J	ko:K02356	-	ko00000,ko03012	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
LMDHPJAF_01387	1.44e-255	pepP	3.4.11.9, 3.4.13.9	-	E	ko:K01262,ko:K01271	-	ko00000,ko01000,ko01002	Creatinase/Prolidase N-terminal domain
LMDHPJAF_01388	9.89e-64	rpmA	-	-	J	ko:K02899	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL27 family
LMDHPJAF_01389	1.67e-66	rplU	-	-	J	ko:K02888	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein binds to 23S rRNA in the presence of protein L20
LMDHPJAF_01390	4.31e-76	yusI	1.20.4.1	-	P	ko:K00537	-	ko00000,ko01000	Belongs to the ArsC family
LMDHPJAF_01391	1.1e-191	-	-	-	S	-	-	-	Uncharacterised 5xTM membrane BCR, YitT family COG1284
LMDHPJAF_01392	1.39e-271	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2325)
LMDHPJAF_01393	6.8e-17	-	-	-	-	-	-	-	-
LMDHPJAF_01394	2.25e-74	-	-	-	-	-	-	-	-
LMDHPJAF_01395	4.18e-38	dmpI	5.3.2.6	-	G	ko:K01821	ko00362,ko00621,ko00622,ko01100,ko01120,ko01220,map00362,map00621,map00622,map01100,map01120,map01220	ko00000,ko00001,ko00002,ko01000	Belongs to the 4-oxalocrotonate tautomerase family
LMDHPJAF_01396	1.59e-117	-	-	-	S	-	-	-	ECF-type riboflavin transporter, S component
LMDHPJAF_01397	7.29e-182	pdxK	2.7.1.35	-	H	ko:K00868	ko00750,ko01100,map00750,map01100	ko00000,ko00001,ko01000	Phosphomethylpyrimidine kinase
LMDHPJAF_01398	5.38e-68	-	-	-	-	-	-	-	-
LMDHPJAF_01399	1.46e-156	-	-	-	S	-	-	-	Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
LMDHPJAF_01400	0.0	-	-	-	S	-	-	-	Predicted membrane protein (DUF2207)
LMDHPJAF_01401	1.87e-218	-	-	-	I	-	-	-	Carboxylesterase family
LMDHPJAF_01402	1.25e-24	-	-	-	K	-	-	-	helix_turn_helix, arabinose operon control protein
LMDHPJAF_01403	0.0	pepC4	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	Peptidase C1-like family
LMDHPJAF_01404	1.22e-81	-	-	-	S	ko:K07006	-	ko00000	Pyridoxamine 5'-phosphate oxidase
LMDHPJAF_01405	2.63e-28	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
LMDHPJAF_01406	1.81e-63	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
LMDHPJAF_01407	1.88e-101	-	-	-	K	-	-	-	MerR HTH family regulatory protein
LMDHPJAF_01408	0.0	ycnB	-	-	U	-	-	-	Belongs to the major facilitator superfamily
LMDHPJAF_01409	7.28e-117	-	-	-	S	-	-	-	Domain of unknown function (DUF4811)
LMDHPJAF_01410	4.3e-185	-	-	-	M	-	-	-	Glycosyl transferase family 2
LMDHPJAF_01411	1.28e-135	-	-	-	D	ko:K04095	-	ko00000,ko03036	Fic/DOC family
LMDHPJAF_01412	5.68e-91	-	-	-	-	-	-	-	-
LMDHPJAF_01413	1.21e-59	-	-	-	V	-	-	-	(ABC) transporter
LMDHPJAF_01414	5.45e-298	-	-	-	L	-	-	-	COG3547 Transposase and inactivated derivatives
LMDHPJAF_01415	1.42e-117	-	-	-	L	-	-	-	Helix-turn-helix domain of transposase family ISL3
LMDHPJAF_01416	1.27e-126	-	-	-	L	-	-	-	Transposase
LMDHPJAF_01418	6.86e-120	-	-	-	S	-	-	-	Cell surface protein
LMDHPJAF_01420	3.47e-285	-	-	-	L	-	-	-	COG3547 Transposase and inactivated derivatives
LMDHPJAF_01421	2.2e-208	-	-	-	L	-	-	-	Transposase
LMDHPJAF_01422	1.99e-235	-	-	-	S	-	-	-	AAA domain
LMDHPJAF_01423	3.24e-158	gpmA1	5.4.2.11	-	G	ko:K01834	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
LMDHPJAF_01424	8.33e-17	-	-	-	-	-	-	-	-
LMDHPJAF_01425	6.77e-51	-	-	-	-	-	-	-	-
LMDHPJAF_01426	3.96e-197	-	-	-	P	ko:K16264	-	ko00000,ko02000	cation diffusion facilitator family transporter
LMDHPJAF_01427	1.06e-69	czrA	-	-	K	ko:K22043	-	ko00000,ko03000	Transcriptional regulator, ArsR family
LMDHPJAF_01428	4.5e-166	-	-	-	G	-	-	-	Belongs to the phosphoglycerate mutase family
LMDHPJAF_01429	1.73e-139	-	3.5.1.124	-	S	ko:K03152	-	ko00000,ko01000,ko01002	DJ-1/PfpI family
LMDHPJAF_01430	3.79e-192	-	-	-	GM	-	-	-	NmrA-like family
LMDHPJAF_01431	1.13e-84	rpsI	-	-	J	ko:K02996	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uS9 family
LMDHPJAF_01432	1.08e-101	rplM	-	-	J	ko:K02871	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
LMDHPJAF_01433	1.51e-190	truA	5.4.99.12	-	J	ko:K06173	-	ko00000,ko01000,ko03016	Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
LMDHPJAF_01434	3.93e-178	ecfT	-	-	U	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
LMDHPJAF_01435	1.25e-264	-	-	-	L	ko:K07496	-	ko00000	Putative transposase DNA-binding domain
LMDHPJAF_01436	1.99e-203	ecfA2	-	-	P	ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
LMDHPJAF_01437	7.45e-196	ecfA1	-	-	P	ko:K16786	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
LMDHPJAF_01438	1.91e-81	rplQ	-	-	J	ko:K02879	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L17
LMDHPJAF_01439	3.11e-219	rpoA	2.7.7.6	-	K	ko:K03040	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
LMDHPJAF_01440	4.46e-81	rpsK	-	-	J	ko:K02948	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
LMDHPJAF_01441	1.92e-73	rpsM	-	-	J	ko:K02952	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
LMDHPJAF_01442	1.89e-21	rpmJ	-	-	J	ko:K02919	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL36 family
LMDHPJAF_01443	4.46e-46	infA	-	-	J	ko:K02518	-	ko00000,ko03012	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
LMDHPJAF_01444	2.32e-153	adk	2.7.4.3	-	F	ko:K00939	ko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
LMDHPJAF_01445	1.2e-299	secY	-	-	U	ko:K03076	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
LMDHPJAF_01446	5.78e-92	rplO	-	-	J	ko:K02876	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to the 23S rRNA
LMDHPJAF_01447	3.44e-33	rpmD	-	-	J	ko:K02907	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L30
LMDHPJAF_01448	9.33e-107	rpsE	-	-	J	ko:K02988	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
LMDHPJAF_01449	1.09e-74	rplR	-	-	J	ko:K02881	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
LMDHPJAF_01450	8.73e-122	rplF	-	-	J	ko:K02933	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
LMDHPJAF_01451	9.28e-89	rpsH	-	-	J	ko:K02994	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
LMDHPJAF_01452	1.73e-40	rpsN	-	-	J	ko:K02954	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
LMDHPJAF_01453	6.1e-124	rplE	-	-	J	ko:K02931	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
LMDHPJAF_01454	1.18e-46	rplX	-	-	J	ko:K02895	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
LMDHPJAF_01455	6.02e-78	rplN	-	-	J	ko:K02874	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
LMDHPJAF_01456	7.74e-56	rpsQ	-	-	J	ko:K02961	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
LMDHPJAF_01457	2.92e-34	rpmC	-	-	J	ko:K02904	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uL29 family
LMDHPJAF_01458	3e-98	rplP	-	-	J	ko:K02878	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
LMDHPJAF_01459	3.69e-157	rpsC	-	-	J	ko:K02982	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
LMDHPJAF_01460	9.07e-73	rplV	-	-	J	ko:K02890	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
LMDHPJAF_01461	1.75e-62	rpsS	-	-	J	ko:K02965	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
LMDHPJAF_01462	1.99e-198	rplB	-	-	J	ko:K02886	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
LMDHPJAF_01463	2.97e-60	rplW	-	-	J	ko:K02892	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
LMDHPJAF_01464	1.57e-136	rplD	-	-	J	ko:K02926	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the polypeptide exit tunnel
LMDHPJAF_01465	1.77e-144	rplC	-	-	J	ko:K02906	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
LMDHPJAF_01466	6.34e-66	rpsJ	-	-	J	ko:K02946	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Involved in the binding of tRNA to the ribosomes
LMDHPJAF_01467	0.0	fusA	-	-	J	ko:K02355	-	ko00000,ko03012,ko03029	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
LMDHPJAF_01468	8.05e-106	rpsG	-	-	J	ko:K02992	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
LMDHPJAF_01469	3.6e-92	rpsL	-	-	J	ko:K02950	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
LMDHPJAF_01470	4.05e-125	comC	3.4.23.43	-	NOU	ko:K02236	-	ko00000,ko00002,ko01000,ko02044	Bacterial Peptidase A24 N-terminal domain
LMDHPJAF_01471	0.0	rpoC	2.7.7.6	-	K	ko:K03046	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
LMDHPJAF_01472	0.0	rpoB	2.7.7.6	-	K	ko:K03043	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
LMDHPJAF_01473	0.0	clpC	-	-	O	ko:K03696	ko01100,map01100	ko00000,ko03110	Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
LMDHPJAF_01476	0.0	lysS	6.1.1.6	-	J	ko:K04567	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-II aminoacyl-tRNA synthetase family
LMDHPJAF_01477	2.26e-244	dus	-	-	J	ko:K05540	-	ko00000,ko01000,ko03016	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
LMDHPJAF_01478	2.15e-204	hslO	-	-	O	ko:K04083	-	ko00000,ko03110	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
LMDHPJAF_01479	0.0	-	-	-	S	-	-	-	membrane
LMDHPJAF_01480	0.0	-	-	-	S	-	-	-	membrane
LMDHPJAF_01481	0.0	ftsH	-	-	O	ko:K03798	-	ko00000,ko00002,ko01000,ko01002,ko03110	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
LMDHPJAF_01482	3.15e-307	tilS	2.4.2.8, 6.3.4.19	-	J	ko:K04075,ko:K15780	ko00230,ko01100,ko01110,map00230,map01100,map01110	ko00000,ko00001,ko01000,ko03016	Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
LMDHPJAF_01483	7.43e-77	-	-	-	J	ko:K07571	-	ko00000	S1 RNA binding domain
LMDHPJAF_01484	1.52e-77	divIC	-	-	D	ko:K13052	-	ko00000,ko03036	Septum formation initiator
LMDHPJAF_01485	2.98e-45	yabO	-	-	J	-	-	-	S4 domain protein
LMDHPJAF_01486	0.0	mfd	-	-	L	ko:K03723	ko03420,map03420	ko00000,ko00001,ko01000,ko03400	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
LMDHPJAF_01487	8.99e-133	pth	3.1.1.29	-	J	ko:K01056	-	ko00000,ko01000,ko03012	The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
LMDHPJAF_01488	1.14e-231	ldh	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	Belongs to the LDH MDH superfamily. LDH family
LMDHPJAF_01489	2.59e-159	-	-	-	S	-	-	-	(CBS) domain
LMDHPJAF_01490	1e-270	alr	5.1.1.1, 5.1.1.5	-	E	ko:K01775,ko:K20707	ko00473,ko01100,ko01502,map00473,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
LMDHPJAF_01491	6.85e-78	acpS	2.7.8.7	-	I	ko:K00997	ko00770,map00770	ko00000,ko00001,ko01000	Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
LMDHPJAF_01492	0.0	cshA	3.6.4.13	-	F	ko:K05592	ko03018,map03018	ko00000,ko00001,ko01000,ko03009,ko03019	DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
LMDHPJAF_01493	0.0	murF	6.3.2.10	-	M	ko:K01929	ko00300,ko00550,ko01100,ko01502,map00300,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
LMDHPJAF_01494	2.28e-194	-	-	-	M	-	-	-	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
LMDHPJAF_01495	3.63e-231	-	-	-	L	-	-	-	Transposase
LMDHPJAF_01497	1.28e-54	rpmE	-	-	J	ko:K02909	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L31
LMDHPJAF_01498	0.0	-	-	-	E	-	-	-	amino acid
LMDHPJAF_01499	8.58e-172	XK27_08845	-	-	S	ko:K05833	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
LMDHPJAF_01500	3.91e-179	XK27_08840	-	-	U	ko:K05832	-	ko00000,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
LMDHPJAF_01501	4.26e-226	ABC-SBP	-	-	S	ko:K01989	-	ko00000,ko00002,ko02000	ABC transporter
LMDHPJAF_01502	4.77e-289	glyA	2.1.2.1	-	E	ko:K00600	ko00260,ko00460,ko00630,ko00670,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko01523,map00260,map00460,map00630,map00670,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map01523	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
LMDHPJAF_01503	0.0	pepDA	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
LMDHPJAF_01504	3.69e-181	nfrA	1.5.1.38	-	C	ko:K19285	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	nitroreductase
LMDHPJAF_01505	1.26e-103	XK27_02070	-	-	S	ko:K07078	-	ko00000	Nitroreductase family
LMDHPJAF_01506	7.25e-43	ydeP	-	-	K	-	-	-	Transcriptional regulator, HxlR family
LMDHPJAF_01507	8.81e-98	-	-	-	-	-	-	-	-
LMDHPJAF_01508	5.16e-90	-	-	-	S	ko:K11621	ko02020,map02020	ko00000,ko00001	Putative adhesin
LMDHPJAF_01509	5.16e-47	-	-	-	-	-	-	-	-
LMDHPJAF_01510	7.22e-114	-	-	-	-	-	-	-	-
LMDHPJAF_01511	9.86e-138	-	-	-	L	-	-	-	Transposase
LMDHPJAF_01512	1.45e-110	crp2	-	-	K	ko:K10914,ko:K21562	ko02020,ko02024,ko02025,ko02026,ko05111,map02020,map02024,map02025,map02026,map05111	ko00000,ko00001,ko03000	helix_turn_helix, cAMP Regulatory protein
LMDHPJAF_01513	2.1e-59	-	-	-	-	-	-	-	-
LMDHPJAF_01514	2.94e-36	-	-	-	-	-	-	-	-
LMDHPJAF_01515	1.15e-94	-	-	-	K	ko:K07707	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko02022	LytTr DNA-binding domain
LMDHPJAF_01516	1.32e-123	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
LMDHPJAF_01517	8.09e-71	-	-	-	K	-	-	-	SIR2-like domain
LMDHPJAF_01518	0.000808	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
LMDHPJAF_01519	0.0	mngB	3.2.1.170	GH38	G	ko:K15524	-	ko00000,ko01000	Glycosyl hydrolases family 38 N-terminal domain
LMDHPJAF_01520	2.63e-170	-	-	-	G	ko:K03491	-	ko00000,ko03000	Mga helix-turn-helix domain
LMDHPJAF_01521	0.0	-	3.2.1.170, 3.2.1.24	GH38	G	ko:K01191,ko:K15524	ko00511,map00511	ko00000,ko00001,ko01000,ko04131	Glycosyl hydrolases family 38 N-terminal domain
LMDHPJAF_01522	5.86e-196	fptC	-	-	U	ko:K02770	ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko02000	system, fructose-specific IIC component
LMDHPJAF_01523	5.6e-48	-	-	-	G	-	-	-	Psort location Cytoplasmic, score 9.98
LMDHPJAF_01524	2.4e-54	-	2.7.1.202	-	G	ko:K02768	ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
LMDHPJAF_01525	1.14e-191	-	-	-	S	ko:K09704	-	ko00000	Metal-independent alpha-mannosidase (GH125)
LMDHPJAF_01526	1.16e-214	manA	5.3.1.8	-	G	ko:K01809	ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	mannose-6-phosphate isomerase
LMDHPJAF_01527	1.32e-123	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
LMDHPJAF_01528	0.0	guaA	6.3.5.2	-	F	ko:K01951	ko00230,ko00983,ko01100,map00230,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko01002	Catalyzes the synthesis of GMP from XMP
LMDHPJAF_01529	4.86e-135	-	-	-	K	-	-	-	Psort location CytoplasmicMembrane, score
LMDHPJAF_01530	2.65e-133	xpt	2.4.2.22	-	F	ko:K03816	ko00230,ko01100,ko01110,map00230,map01100,map01110	ko00000,ko00001,ko01000	Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
LMDHPJAF_01531	1.08e-303	pbuX	-	-	F	ko:K03458,ko:K16169	-	ko00000,ko02000	xanthine permease
LMDHPJAF_01532	2.09e-304	murA	2.5.1.7	-	M	ko:K00790	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
LMDHPJAF_01533	0.0	pyrG	6.3.4.2	-	F	ko:K01937	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
LMDHPJAF_01534	4.17e-90	rpoE	-	-	K	ko:K03048	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko03021,ko03400	Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
LMDHPJAF_01535	7.93e-94	-	-	-	S	-	-	-	Domain of unknown function (DUF1934)
LMDHPJAF_01536	0.0	-	-	-	S	ko:K06885	-	ko00000	Metal dependent phosphohydrolases with conserved 'HD' motif.
LMDHPJAF_01537	0.0	dexB	3.2.1.70	-	G	ko:K01215	-	ko00000,ko01000	Alpha amylase, catalytic domain protein
LMDHPJAF_01538	1.14e-196	malG	-	-	P	ko:K15772	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
LMDHPJAF_01539	0.0	malF	-	-	P	ko:K15771	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
LMDHPJAF_01540	1.12e-284	malE	-	-	G	ko:K15770	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding protein
LMDHPJAF_01541	7.88e-268	msmX	-	-	P	ko:K10112	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
LMDHPJAF_01542	6.33e-148	pgmB	5.4.2.6	-	S	ko:K01838	ko00500,map00500	ko00000,ko00001,ko01000	beta-phosphoglucomutase
LMDHPJAF_01543	0.0	mapA	2.4.1.8	GH65	G	ko:K00691	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	hydrolase, family 65, central catalytic
LMDHPJAF_01544	0.0	nplT	3.2.1.133, 3.2.1.135, 3.2.1.54	GH13	G	ko:K01208	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 13 family
LMDHPJAF_01545	0.0	malA1	3.2.1.10, 3.2.1.20	GH13,GH31	G	ko:K01182,ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Alpha amylase, catalytic domain
LMDHPJAF_01546	4.41e-220	yvdE	-	-	K	-	-	-	helix_turn _helix lactose operon repressor
LMDHPJAF_01547	4.59e-222	prs	2.7.6.1	-	F	ko:K00948	ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
LMDHPJAF_01548	0.0	glmU	2.3.1.157, 2.7.7.23	-	M	ko:K04042	ko00520,ko01100,ko01130,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
LMDHPJAF_01549	3.16e-195	purR	-	-	F	ko:K09685	-	ko00000,ko03000	pur operon repressor
LMDHPJAF_01550	2.46e-48	veg	-	-	S	-	-	-	Biofilm formation stimulator VEG
LMDHPJAF_01551	4.51e-204	ksgA	2.1.1.182	-	J	ko:K02528	-	ko00000,ko01000,ko03009	Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
LMDHPJAF_01552	6.53e-127	rnmV	3.1.26.8	-	J	ko:K05985	-	ko00000,ko01000	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
LMDHPJAF_01553	2.14e-187	tatD	-	-	L	ko:K03424	-	ko00000,ko01000	hydrolase, TatD family
LMDHPJAF_01554	0.0	metG	6.1.1.10	-	J	ko:K01874	ko00450,ko00970,map00450,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
LMDHPJAF_01555	1.32e-228	mgtA	3.6.3.2	-	P	ko:K01531	-	ko00000,ko01000	COG0474 Cation transport ATPase
LMDHPJAF_01556	8.32e-78	-	-	-	S	ko:K06872	-	ko00000	TPM domain
LMDHPJAF_01557	1.04e-21	-	-	-	S	ko:K06872	-	ko00000	TPM domain
LMDHPJAF_01558	6.82e-119	comEB	3.5.4.12	-	F	ko:K01493	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko02044	MafB19-like deaminase
LMDHPJAF_01559	4.96e-247	trpS	6.1.1.2	-	J	ko:K01867	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-I aminoacyl-tRNA synthetase family
LMDHPJAF_01560	2.01e-147	-	-	-	E	-	-	-	Belongs to the SOS response-associated peptidase family
LMDHPJAF_01562	6.6e-150	-	-	-	-	-	-	-	-
LMDHPJAF_01563	3.54e-196	ypbG	2.7.1.2	-	GK	ko:K00845	ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	ROK family
LMDHPJAF_01564	0.0	pbg6	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
LMDHPJAF_01565	5.06e-35	pts23C	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
LMDHPJAF_01566	7.33e-276	pts23C	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
LMDHPJAF_01567	8.12e-69	ptcB	2.7.1.196, 2.7.1.205	-	G	ko:K02760	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
LMDHPJAF_01568	1.76e-68	-	2.7.1.196, 2.7.1.205	-	G	ko:K02759	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose Cellobiose specific IIA subunit
LMDHPJAF_01569	1.15e-174	-	-	-	K	ko:K03492	-	ko00000,ko03000	UTRA
LMDHPJAF_01570	0.0	-	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
LMDHPJAF_01571	1.07e-84	-	-	-	S	-	-	-	Domain of unknown function (DUF3284)
LMDHPJAF_01572	1.56e-163	-	-	-	K	ko:K03489	-	ko00000,ko03000	UTRA
LMDHPJAF_01573	6.29e-307	celD	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
LMDHPJAF_01574	2.42e-100	-	-	-	-	-	-	-	-
LMDHPJAF_01575	0.0	pbg4	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
LMDHPJAF_01576	4.21e-100	-	-	-	O	ko:K13993	ko04141,map04141	ko00000,ko00001,ko03110	Belongs to the small heat shock protein (HSP20) family
LMDHPJAF_01577	1.1e-97	greA	-	-	K	ko:K03624	-	ko00000,ko03021	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
LMDHPJAF_01578	2.46e-62	-	-	-	-	-	-	-	-
LMDHPJAF_01579	0.0	pepE	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	aminopeptidase
LMDHPJAF_01580	4.68e-153	ypgQ	-	-	S	ko:K06950	-	ko00000	Metal dependent phosphohydrolases with conserved 'HD' motif.
LMDHPJAF_01581	0.0	pepC1	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	aminopeptidase
LMDHPJAF_01583	9.45e-302	tyrS	6.1.1.1	-	J	ko:K01866	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
LMDHPJAF_01584	0.0	XK27_08315	-	-	M	-	-	-	Sulfatase
LMDHPJAF_01585	1.2e-145	plsY1	2.3.1.15	-	I	ko:K08591	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
LMDHPJAF_01586	3.31e-261	brpA	-	-	K	-	-	-	Cell envelope-like function transcriptional attenuator common domain protein
LMDHPJAF_01587	1.87e-215	yqhA	-	-	G	-	-	-	Aldose 1-epimerase
LMDHPJAF_01588	2.12e-193	-	-	-	U	ko:K05340	-	ko00000,ko02000	sugar transport
LMDHPJAF_01589	2.82e-148	-	-	-	-	-	-	-	-
LMDHPJAF_01590	7.2e-38	-	-	-	U	ko:K18926	-	ko00000,ko00002,ko02000	Drug resistance MFS transporter, drug H antiporter-2 family
LMDHPJAF_01591	1.99e-64	lmrB	-	-	U	ko:K18926	-	ko00000,ko00002,ko02000	Belongs to the major facilitator superfamily
LMDHPJAF_01592	6.48e-43	lmrB	-	-	EGP	ko:K18926	-	ko00000,ko00002,ko02000	the major facilitator superfamily
LMDHPJAF_01593	4.28e-225	yfdH	-	GT2	M	ko:K12999	-	ko00000,ko01000,ko01003,ko01005	Glycosyltransferase, group 2 family protein
LMDHPJAF_01594	9.65e-95	-	-	-	S	-	-	-	GtrA-like protein
LMDHPJAF_01595	1.26e-55	rpsN	-	-	J	ko:K02954	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
LMDHPJAF_01597	5.09e-15	-	-	-	-	-	-	-	-
LMDHPJAF_01599	1.75e-143	yodM	3.6.1.27	-	I	ko:K19302	ko00550,map00550	ko00000,ko00001,ko01000,ko01011	Acid phosphatase homologues
LMDHPJAF_01600	0.0	leuS	6.1.1.4	-	J	ko:K01869	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Belongs to the class-I aminoacyl-tRNA synthetase family
LMDHPJAF_01601	0.0	ytgP	-	-	S	ko:K03328	-	ko00000	Polysaccharide biosynthesis protein
LMDHPJAF_01602	1.4e-138	-	-	-	S	-	-	-	Protein of unknown function (DUF2974)
LMDHPJAF_01603	1.07e-74	-	-	-	S	-	-	-	Protein of unknown function (DUF2974)
LMDHPJAF_01604	3.15e-172	-	-	-	-	-	-	-	-
LMDHPJAF_01605	4.1e-188	nnrD	4.2.1.136, 5.1.99.6	-	H	ko:K17758,ko:K17759	-	ko00000,ko01000	Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
LMDHPJAF_01606	4.22e-215	dacA	3.4.16.4	-	M	ko:K07258	ko00550,ko01100,map00550,map01100	ko00000,ko00001,ko01000,ko01002,ko01011	Belongs to the peptidase S11 family
LMDHPJAF_01607	0.0	argS	6.1.1.19	-	J	ko:K01887	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Arginyl-tRNA synthetase
LMDHPJAF_01608	3.79e-221	fba	4.1.2.13, 4.1.2.29	-	G	ko:K01624,ko:K03339	ko00010,ko00030,ko00051,ko00562,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00562,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Fructose-1,6-bisphosphate aldolase, class II
LMDHPJAF_01609	4.11e-58	-	-	-	-	-	-	-	-
LMDHPJAF_01610	8.18e-38	-	-	-	K	-	-	-	Sigma-54 interaction domain
LMDHPJAF_01611	8.68e-35	-	-	-	K	-	-	-	Sigma-54 interaction domain
LMDHPJAF_01612	1.33e-59	-	-	-	K	-	-	-	Sigma-54 interaction domain
LMDHPJAF_01614	2.8e-119	hpt	2.4.2.8	-	F	ko:K00760	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the purine pyrimidine phosphoribosyltransferase family
LMDHPJAF_01615	1.69e-158	-	-	-	F	-	-	-	Glutamine amidotransferase class-I
LMDHPJAF_01616	3.22e-99	ylbE	-	-	GM	-	-	-	NAD(P)H-binding
LMDHPJAF_01617	6.91e-315	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
LMDHPJAF_01618	4.51e-111	-	-	-	L	ko:K07491	-	ko00000	Transposase IS200 like
LMDHPJAF_01619	6.95e-105	ytsP	1.8.4.14	-	T	ko:K08968	ko00270,map00270	ko00000,ko00001,ko01000	GAF domain-containing protein
LMDHPJAF_01620	1.75e-29	-	-	-	P	-	-	-	Voltage gated chloride channel
LMDHPJAF_01621	2.59e-227	-	-	-	P	-	-	-	Voltage gated chloride channel
LMDHPJAF_01622	3.07e-240	-	-	-	S	-	-	-	Bacteriocin helveticin-J
LMDHPJAF_01623	4.08e-126	tag	3.2.2.20	-	L	ko:K01246	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	glycosylase
LMDHPJAF_01624	3.98e-196	-	-	-	S	ko:K07088	-	ko00000	Membrane transport protein
LMDHPJAF_01625	6.82e-174	-	-	-	S	ko:K07052	-	ko00000	CAAX amino terminal protease
LMDHPJAF_01626	4.01e-184	glpF	-	-	U	ko:K02440	-	ko00000,ko02000	Belongs to the MIP aquaporin (TC 1.A.8) family
LMDHPJAF_01627	0.0	qacA	-	-	EGP	-	-	-	Major Facilitator
LMDHPJAF_01628	0.0	qacA	-	-	EGP	-	-	-	Major Facilitator
LMDHPJAF_01629	8.35e-277	-	-	-	L	-	-	-	COG3547 Transposase and inactivated derivatives
LMDHPJAF_01631	5.27e-233	ybfG	-	-	M	-	-	-	peptidoglycan-binding domain-containing protein
LMDHPJAF_01633	7.68e-23	-	-	-	-	-	-	-	-
LMDHPJAF_01634	2.1e-110	-	-	-	K	-	-	-	acetyltransferase
LMDHPJAF_01635	4.43e-178	-	3.1.3.102, 3.1.3.104	-	S	ko:K20861	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Sucrose-6F-phosphate phosphohydrolase
LMDHPJAF_01636	1.34e-131	-	-	-	S	-	-	-	Protein of unknown function (DUF1440)
LMDHPJAF_01637	2.05e-186	-	-	-	S	-	-	-	hydrolase
LMDHPJAF_01638	5.71e-196	-	-	-	K	-	-	-	Transcriptional regulator
LMDHPJAF_01639	3.66e-21	-	-	-	-	-	-	-	-
LMDHPJAF_01640	1.97e-29	-	-	-	-	-	-	-	-
LMDHPJAF_01641	2.28e-306	pyrP	-	-	F	ko:K02824	-	ko00000,ko02000	Permease
LMDHPJAF_01642	3.18e-164	-	-	-	K	ko:K02530	-	ko00000,ko03000	DeoR C terminal sensor domain
LMDHPJAF_01643	1.05e-52	glsA	3.5.1.2	-	E	ko:K01425	ko00220,ko00250,ko00471,ko01100,ko04724,ko04727,ko04964,ko05206,ko05230,map00220,map00250,map00471,map01100,map04724,map04727,map04964,map05206,map05230	ko00000,ko00001,ko01000	Belongs to the glutaminase family
LMDHPJAF_01644	3.01e-83	glsA	3.5.1.2	-	E	ko:K01425	ko00220,ko00250,ko00471,ko01100,ko04724,ko04727,ko04964,ko05206,ko05230,map00220,map00250,map00471,map01100,map04724,map04727,map04964,map05206,map05230	ko00000,ko00001,ko01000	Belongs to the glutaminase family
LMDHPJAF_01645	3.31e-143	-	-	-	I	-	-	-	Acid phosphatase homologues
LMDHPJAF_01646	2.26e-58	-	-	-	E	-	-	-	Phospholipase B
LMDHPJAF_01647	6.69e-127	-	-	-	E	ko:K20265	ko02024,map02024	ko00000,ko00001,ko02000	Contains amino acid permease domain
LMDHPJAF_01648	7.54e-99	-	-	-	E	ko:K20265	ko02024,map02024	ko00000,ko00001,ko02000	Contains amino acid permease domain
LMDHPJAF_01649	1.06e-26	-	-	-	E	ko:K20265	ko02024,map02024	ko00000,ko00001,ko02000	Contains amino acid permease domain
LMDHPJAF_01650	1.93e-50	-	-	-	E	-	-	-	amino acid
LMDHPJAF_01651	1.25e-225	-	-	-	E	-	-	-	amino acid
LMDHPJAF_01652	8.81e-169	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
LMDHPJAF_01653	1.13e-272	pmrA	-	-	EGP	ko:K08161	-	ko00000,ko02000	MFS_1 like family
LMDHPJAF_01654	9.41e-41	-	-	-	-	-	-	-	-
LMDHPJAF_01655	2.25e-91	rmaE	-	-	K	-	-	-	helix_turn_helix multiple antibiotic resistance protein
LMDHPJAF_01656	2.36e-104	-	-	-	-	-	-	-	-
LMDHPJAF_01657	7.25e-265	pepA	-	-	E	-	-	-	M42 glutamyl aminopeptidase
LMDHPJAF_01659	3.8e-143	ybbL	-	-	S	ko:K02068	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
LMDHPJAF_01660	4.93e-166	ybbM	-	-	S	ko:K02069	-	ko00000,ko00002,ko02000	Uncharacterised protein family (UPF0014)
LMDHPJAF_01661	1.54e-258	psd	4.1.1.65	-	I	ko:K01613	ko00564,ko01100,ko01110,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Belongs to the phosphatidylserine decarboxylase family
LMDHPJAF_01662	0.0	lacA	3.2.1.23	-	G	ko:K12308	ko00052,map00052	ko00000,ko00001,ko01000	-beta-galactosidase
LMDHPJAF_01663	0.0	dtpT	-	-	U	ko:K03305	-	ko00000	amino acid peptide transporter
LMDHPJAF_01664	6.08e-55	-	-	-	E	-	-	-	Peptidase family C69
LMDHPJAF_01665	2.01e-273	-	-	-	E	-	-	-	Peptidase family C69
LMDHPJAF_01666	1.14e-276	-	-	-	EGP	ko:K08196	-	ko00000,ko02000	Major Facilitator
LMDHPJAF_01667	2.49e-195	-	-	-	S	-	-	-	Alpha beta hydrolase
LMDHPJAF_01668	2.43e-86	-	-	-	K	-	-	-	Transcriptional regulator, MarR family
LMDHPJAF_01669	0.0	XK27_09600	-	-	V	ko:K06147,ko:K18891	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter, ATP-binding protein
LMDHPJAF_01670	0.0	XK27_09605	-	-	V	ko:K18892	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter transmembrane region
LMDHPJAF_01671	1.49e-186	peb1A	-	-	ET	ko:K10039	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
LMDHPJAF_01672	8.46e-174	glnQ	-	-	E	ko:K10041	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
LMDHPJAF_01673	3.69e-192	peb1A	-	-	ET	ko:K10039	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
LMDHPJAF_01674	2.13e-142	glnM	-	-	P	ko:K10040	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
LMDHPJAF_01675	6.53e-139	glnP	-	-	P	ko:K10040	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
LMDHPJAF_01676	1.62e-83	-	-	-	-	-	-	-	-
LMDHPJAF_01677	4.54e-107	-	-	-	S	-	-	-	Putative adhesin
LMDHPJAF_01679	2.24e-148	udk	2.7.1.48	-	F	ko:K00876	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	Cytidine monophosphokinase
LMDHPJAF_01682	7.21e-203	-	-	-	S	-	-	-	CAAX protease self-immunity
LMDHPJAF_01683	9.5e-70	-	-	-	S	-	-	-	Enterocin A Immunity
LMDHPJAF_01685	0.0	pacL	-	-	P	-	-	-	Cation transporter/ATPase, N-terminus
LMDHPJAF_01686	2.88e-164	-	-	-	-	-	-	-	-
LMDHPJAF_01687	2.27e-128	lepB	3.4.21.89	-	U	ko:K03100	ko02024,ko03060,map02024,map03060	ko00000,ko00001,ko01000,ko01002	Belongs to the peptidase S26 family
LMDHPJAF_01688	5.06e-31	-	-	-	-	-	-	-	-
LMDHPJAF_01689	2.3e-172	-	-	-	-	-	-	-	-
LMDHPJAF_01690	9.65e-182	-	-	-	-	-	-	-	-
LMDHPJAF_01691	2.57e-159	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
LMDHPJAF_01692	3.91e-76	lexA	-	-	K	ko:K07979	-	ko00000,ko03000	Transcriptional regulator, GntR family
LMDHPJAF_01693	7.64e-313	pepT	3.4.11.4	-	E	ko:K01258	-	ko00000,ko01000,ko01002	Cleaves the N-terminal amino acid of tripeptides
LMDHPJAF_01694	5.49e-194	yqfO	-	-	S	-	-	-	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
LMDHPJAF_01695	3.55e-153	trmK	2.1.1.217	-	S	ko:K06967	-	ko00000,ko01000,ko03016	SAM-dependent methyltransferase
LMDHPJAF_01696	4.24e-187	cjaA	-	-	ET	ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter substrate-binding protein
LMDHPJAF_01697	2.2e-170	glnQ	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
LMDHPJAF_01698	2.89e-151	glnP7	-	-	P	ko:K02029	-	ko00000,ko00002,ko02000	ABC transporter permease
LMDHPJAF_01699	9.72e-147	glnP9	-	-	P	ko:K02029	-	ko00000,ko00002,ko02000	ABC transporter, permease protein
LMDHPJAF_01700	3.52e-253	sigA	-	-	K	ko:K03086	-	ko00000,ko03021	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
LMDHPJAF_01701	0.0	dnaG	-	-	L	ko:K02316	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
LMDHPJAF_01702	0.0	glyS	6.1.1.14	-	J	ko:K01879	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Glycyl-tRNA synthetase beta subunit
LMDHPJAF_01703	9.03e-229	glyQ	6.1.1.14	-	J	ko:K01878	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	glycyl-tRNA synthetase alpha subunit
LMDHPJAF_01704	1.09e-172	recO	-	-	L	ko:K03584	ko03440,map03440	ko00000,ko00001,ko03400	Involved in DNA repair and RecF pathway recombination
LMDHPJAF_01705	5.55e-215	era	-	-	S	ko:K03595	-	ko00000,ko03009,ko03029	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
LMDHPJAF_01706	1.97e-113	ybeY	-	-	S	ko:K07042	-	ko00000,ko03009	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
LMDHPJAF_01707	1.36e-219	phoH	-	-	T	ko:K06217	-	ko00000	phosphate starvation-inducible protein PhoH
LMDHPJAF_01708	5.18e-75	yqeY	-	-	S	ko:K09117	-	ko00000	YqeY-like protein
LMDHPJAF_01709	8.33e-31	rpsU	-	-	J	ko:K02970	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bS21 family
LMDHPJAF_01710	9.45e-198	yqfL	2.7.11.33, 2.7.4.28	-	F	ko:K09773	-	ko00000,ko01000	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
LMDHPJAF_01711	8.82e-68	yitW	-	-	S	-	-	-	Iron-sulfur cluster assembly protein
LMDHPJAF_01712	1.01e-194	sdaAA	4.3.1.17	-	E	ko:K01752	ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230	ko00000,ko00001,ko01000	L-serine dehydratase, iron-sulfur-dependent, alpha subunit
LMDHPJAF_01713	5.26e-156	-	4.3.1.17	-	E	ko:K01752	ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230	ko00000,ko00001,ko01000	Serine dehydratase beta chain
LMDHPJAF_01714	2.23e-202	yitT	-	-	S	-	-	-	Uncharacterised 5xTM membrane BCR, YitT family COG1284
LMDHPJAF_01715	2.55e-134	msrA	1.8.4.11, 1.8.4.12	-	O	ko:K07304,ko:K12267	-	ko00000,ko01000	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
LMDHPJAF_01717	4.79e-173	-	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase family
LMDHPJAF_01718	9.01e-103	msrB	1.8.4.12	-	O	ko:K07305	-	ko00000,ko01000	peptide methionine sulfoxide reductase
LMDHPJAF_01719	2.51e-280	aspC	-	-	E	ko:K00841	ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase
LMDHPJAF_01720	0.0	aspS	6.1.1.12	-	J	ko:K01876	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
LMDHPJAF_01721	5.21e-313	hisS	6.1.1.21	-	J	ko:K01892	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	histidyl-tRNA synthetase
LMDHPJAF_01722	8.26e-96	dtd	-	-	J	ko:K07560	-	ko00000,ko01000,ko03016	rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
LMDHPJAF_01723	0.0	relA	2.7.6.5	-	KT	ko:K00951	ko00230,map00230	ko00000,ko00001,ko01000	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
LMDHPJAF_01724	3.71e-83	-	-	-	-	-	-	-	-
LMDHPJAF_01725	9.23e-218	prmA	-	-	J	ko:K02687	-	ko00000,ko01000,ko03009	Ribosomal protein L11 methyltransferase
LMDHPJAF_01726	4.21e-111	ybaK	-	-	S	ko:K03976	-	ko00000,ko01000,ko03016	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
LMDHPJAF_01727	0.0	-	-	-	S	-	-	-	Bacterial membrane protein, YfhO
LMDHPJAF_01728	0.0	aha1	-	-	P	ko:K12952	-	ko00000,ko01000	E1-E2 ATPase
LMDHPJAF_01729	8.15e-241	ansA	3.5.1.1	-	EJ	ko:K01424	ko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110	ko00000,ko00001,ko01000	L-asparaginase, type I
LMDHPJAF_01730	0.0	-	-	-	S	-	-	-	Putative threonine/serine exporter
LMDHPJAF_01731	1.72e-214	ldh	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	Belongs to the LDH MDH superfamily. LDH family
LMDHPJAF_01732	0.0	frdA	1.3.5.4	-	C	ko:K00244	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	ko00000,ko00001,ko00002,ko01000	FAD binding domain
LMDHPJAF_01733	0.0	fumC	4.2.1.2	-	C	ko:K01679	ko00020,ko00620,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko04934,ko05200,ko05211,map00020,map00620,map00720,map01100,map01110,map01120,map01130,map01200,map04934,map05200,map05211	ko00000,ko00001,ko00002,ko01000	Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
LMDHPJAF_01734	3.89e-114	metI	-	-	P	ko:K02072	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
LMDHPJAF_01735	6.91e-237	metN	-	-	P	ko:K02071	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
LMDHPJAF_01736	5.25e-197	metQ	-	-	P	ko:K02073	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the nlpA lipoprotein family
LMDHPJAF_01737	1.74e-89	-	-	-	L	-	-	-	nuclease
LMDHPJAF_01738	8.47e-182	-	-	-	F	ko:K15051	-	ko00000	DNA/RNA non-specific endonuclease
LMDHPJAF_01739	1.22e-122	-	-	-	J	ko:K19545	-	ko00000,ko01504	Aminoglycoside-2''-adenylyltransferase
LMDHPJAF_01740	7.41e-255	-	-	-	L	-	-	-	transposition, DNA-mediated
LMDHPJAF_01741	8.78e-42	-	-	-	K	-	-	-	Helix-turn-helix domain
LMDHPJAF_01742	1.91e-236	cbh	3.5.1.24	-	M	ko:K01442	ko00120,ko00121,ko01100,map00120,map00121,map01100	ko00000,ko00001,ko01000	Linear amide C-N hydrolase, choloylglycine hydrolase family protein
LMDHPJAF_01743	0.0	ykpA	-	-	S	-	-	-	ABC transporter, ATP-binding protein
LMDHPJAF_01744	2.94e-42	-	-	-	S	-	-	-	Sugar efflux transporter for intercellular exchange
LMDHPJAF_01745	2.48e-311	eno	4.2.1.11	-	G	ko:K01689	ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066	ko00000,ko00001,ko00002,ko01000,ko03019,ko04147	Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
LMDHPJAF_01746	3.61e-132	-	-	-	I	-	-	-	PAP2 superfamily
LMDHPJAF_01748	1.83e-196	lysR5	-	-	K	-	-	-	LysR substrate binding domain
LMDHPJAF_01749	0.0	-	-	-	P	-	-	-	Cation transporter/ATPase, N-terminus
LMDHPJAF_01750	0.0	-	-	-	G	ko:K16211	-	ko00000,ko02000	Major Facilitator
LMDHPJAF_01751	7.02e-119	folA	1.5.1.3	-	H	ko:K00287	ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523	ko00000,ko00001,ko00002,ko01000	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
LMDHPJAF_01752	3.43e-235	thyA	2.1.1.45	-	F	ko:K00560	ko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523	ko00000,ko00001,ko00002,ko01000	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
LMDHPJAF_01753	0.0	cls	-	-	I	ko:K06131	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
LMDHPJAF_01754	0.0	potE	-	-	E	-	-	-	Amino Acid
LMDHPJAF_01755	0.0	-	3.1.21.3	-	V	ko:K01153	-	ko00000,ko01000,ko02048	EcoEI R protein C-terminal
LMDHPJAF_01756	2.3e-86	mutT	3.6.1.55	-	L	ko:K03574	-	ko00000,ko01000,ko03400	NUDIX domain
LMDHPJAF_01757	0.0	-	-	-	L	-	-	-	Helicase C-terminal domain protein
LMDHPJAF_01758	2.22e-312	-	-	-	L	ko:K07484	-	ko00000	Transposase IS66 family
LMDHPJAF_01759	5.51e-46	-	-	-	S	-	-	-	Transposase C of IS166 homeodomain
LMDHPJAF_01760	4.01e-84	XK27_01125	-	-	L	ko:K07484	-	ko00000	PFAM IS66 Orf2 family protein
LMDHPJAF_01761	4.01e-32	-	-	-	-	-	-	-	-
LMDHPJAF_01762	0.0	-	-	-	C	-	-	-	FMN_bind
LMDHPJAF_01763	4.58e-161	-	-	-	L	ko:K07448	-	ko00000,ko02048	restriction endonuclease
LMDHPJAF_01764	5.3e-184	mrr2	-	-	L	ko:K07448	-	ko00000,ko02048	restriction endonuclease
LMDHPJAF_01765	4.66e-74	-	2.5.1.74	-	H	ko:K02548	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01006	UbiA prenyltransferase family
LMDHPJAF_01766	2.72e-205	XK27_10395	-	-	S	-	-	-	Uncharacterised 5xTM membrane BCR, YitT family COG1284
LMDHPJAF_01767	1.36e-286	cca	2.7.7.72	-	J	ko:K00974	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
LMDHPJAF_01768	2.78e-147	hlyIII	-	-	S	ko:K11068	-	ko00000,ko02042	protein, hemolysin III
LMDHPJAF_01769	2.03e-190	degV3	-	-	S	-	-	-	Uncharacterised protein, DegV family COG1307
LMDHPJAF_01770	3.74e-48	yozE	-	-	S	-	-	-	Belongs to the UPF0346 family
LMDHPJAF_01771	0.0	ctpA	3.4.21.102	-	M	ko:K03797	-	ko00000,ko01000,ko01002	Belongs to the peptidase S41A family
LMDHPJAF_01772	1.41e-203	rbgA	-	-	S	ko:K14540	-	ko00000,ko03009	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
LMDHPJAF_01773	2.11e-170	rnhB	3.1.26.4	-	L	ko:K03470	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
LMDHPJAF_01774	1.19e-196	dprA	-	-	LU	ko:K04096	-	ko00000	DNA protecting protein DprA
LMDHPJAF_01775	0.0	topA	5.99.1.2	-	L	ko:K03168	-	ko00000,ko01000,ko03032,ko03400	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
LMDHPJAF_01776	4.18e-315	trmFO	2.1.1.74	-	J	ko:K04094	-	ko00000,ko01000,ko03016,ko03036	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
LMDHPJAF_01777	4.96e-218	xerC	-	-	D	ko:K03733,ko:K04763	-	ko00000,ko03036	Phage integrase, N-terminal SAM-like domain
LMDHPJAF_01778	1.9e-115	hslV	3.4.25.2	-	O	ko:K01419	-	ko00000,ko01000,ko01002	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
LMDHPJAF_01779	0.0	hslU	-	-	O	ko:K03667	-	ko00000,ko03110	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
LMDHPJAF_01780	2.79e-227	lacX	5.1.3.3	-	G	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Aldose 1-epimerase
LMDHPJAF_01781	7.3e-122	-	-	-	K	-	-	-	LysR substrate binding domain
LMDHPJAF_01782	5.82e-130	-	-	-	S	ko:K07038	-	ko00000	LexA-binding, inner membrane-associated putative hydrolase
LMDHPJAF_01784	3.54e-94	-	-	-	-	-	-	-	-
LMDHPJAF_01785	3.29e-260	tnpB	-	-	L	ko:K07496	-	ko00000	Putative transposase DNA-binding domain
LMDHPJAF_01786	4.96e-227	-	-	-	S	-	-	-	Conserved hypothetical protein 698
LMDHPJAF_01787	1.4e-58	-	-	-	K	-	-	-	Transcriptional regulator
LMDHPJAF_01788	2.42e-105	-	-	-	S	-	-	-	Pyridoxamine 5'-phosphate oxidase
LMDHPJAF_01789	0.0	alsS	2.2.1.6	-	EH	ko:K01652	ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the TPP enzyme family
LMDHPJAF_01790	1.12e-165	budA	4.1.1.5	-	Q	ko:K01575	ko00650,ko00660,map00650,map00660	ko00000,ko00001,ko01000	Alpha-acetolactate decarboxylase
LMDHPJAF_01791	1.96e-105	ybbB	-	-	S	-	-	-	Protein of unknown function (DUF1211)
LMDHPJAF_01792	1.64e-51	-	-	-	S	-	-	-	reductase
LMDHPJAF_01793	5.97e-138	-	-	-	S	ko:K07025	-	ko00000	Haloacid dehalogenase-like hydrolase
LMDHPJAF_01794	6.97e-150	yjhB	3.6.1.13	-	F	ko:K01515	ko00230,map00230	ko00000,ko00001,ko01000	NUDIX domain
LMDHPJAF_01795	4.35e-66	-	-	-	T	-	-	-	Transcriptional regulatory protein, C terminal
LMDHPJAF_01796	1.54e-59	ykoJ	-	-	S	-	-	-	Peptidase propeptide and YPEB domain
LMDHPJAF_01797	1.34e-15	ykoJ	-	-	S	-	-	-	Peptidase propeptide and YPEB domain
LMDHPJAF_01798	2.18e-47	adh2	1.1.1.1	-	E	ko:K00001	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	alcohol dehydrogenase
LMDHPJAF_01799	1.24e-115	-	-	-	S	ko:K11621	ko02020,map02020	ko00000,ko00001	Putative adhesin
LMDHPJAF_01800	2.1e-311	brnQ	-	-	U	ko:K03311	-	ko00000	Component of the transport system for branched-chain amino acids
LMDHPJAF_01801	2.86e-65	mntH	-	-	P	ko:K03322	-	ko00000,ko02000	H( )-stimulated, divalent metal cation uptake system
LMDHPJAF_01802	2.05e-175	-	-	-	H	-	-	-	Nodulation protein S (NodS)
LMDHPJAF_01803	1.6e-121	cbh	3.5.1.24	-	M	ko:K01442	ko00120,ko00121,ko01100,map00120,map00121,map01100	ko00000,ko00001,ko01000	Linear amide C-N hydrolase, choloylglycine hydrolase family protein
LMDHPJAF_01805	3.03e-174	-	-	-	S	-	-	-	PFAM Archaeal ATPase
LMDHPJAF_01806	0.0	uvrA2	-	-	L	ko:K03701	ko03420,map03420	ko00000,ko00001,ko03400	excinuclease ABC, A subunit
LMDHPJAF_01807	2.39e-222	XK27_00915	-	-	C	-	-	-	Luciferase-like monooxygenase
LMDHPJAF_01809	1.82e-71	-	-	-	S	-	-	-	Antibiotic biosynthesis monooxygenase
LMDHPJAF_01810	1.42e-112	tpx	1.11.1.15	-	O	ko:K11065	-	ko00000,ko01000	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
LMDHPJAF_01811	5.08e-39	-	-	-	S	-	-	-	Cupin domain
LMDHPJAF_01812	2.61e-45	mgtA	3.6.3.2	-	P	ko:K01531	-	ko00000,ko01000	COG0474 Cation transport ATPase
LMDHPJAF_01813	8.1e-274	mgtA	3.6.3.2	-	P	ko:K01531	-	ko00000,ko01000	COG0474 Cation transport ATPase
LMDHPJAF_01814	6.23e-203	-	-	-	-	-	-	-	-