ORF_ID e_value Gene_name EC_number CAZy COGs KEGG_ko KEGG_Pathway BRITE Description
PCBEPFIF_00001 0.0 clpE - - O ko:K03697,ko:K04086 - ko00000,ko03110 AAA domain (Cdc48 subfamily)
PCBEPFIF_00002 3.34e-213 - - - S - - - Alpha/beta hydrolase of unknown function (DUF915)
PCBEPFIF_00003 3.09e-304 pts13C - - G ko:K02761 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko02000 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PCBEPFIF_00004 1.28e-76 - - - V ko:K02003 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
PCBEPFIF_00005 1.36e-53 - - - V ko:K02003 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
PCBEPFIF_00006 0.0 ylbB - - V ko:K02004 - ko00000,ko00002,ko02000 ABC transporter permease
PCBEPFIF_00007 1.96e-49 - - - - - - - -
PCBEPFIF_00008 0.0 ytgP - - S ko:K03328 - ko00000 Polysaccharide biosynthesis protein
PCBEPFIF_00009 1.34e-183 lysA2 - - M ko:K07273 - ko00000 Glycosyl hydrolases family 25
PCBEPFIF_00010 6.14e-173 - - - S - - - Protein of unknown function (DUF975)
PCBEPFIF_00011 4.44e-224 pbpX2 - - V - - - Beta-lactamase
PCBEPFIF_00012 1.43e-310 dltD - - M ko:K03740 ko01503,ko02020,ko05150,map01503,map02020,map05150 ko00000,ko00001,ko00002,ko01504 Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
PCBEPFIF_00013 7.07e-48 dltC 6.1.1.13 - J ko:K14188 ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150 ko00000,ko00001,ko00002,ko01000,ko01504 Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PCBEPFIF_00014 1.07e-306 dltB - - M ko:K03739 ko01503,ko02020,ko05150,map01503,map02020,map05150 ko00000,ko00001,ko00002,ko01504 MBOAT, membrane-bound O-acyltransferase family
PCBEPFIF_00015 0.0 dltA 6.1.1.13 - H ko:K03367 ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150 ko00000,ko00001,ko00002,ko01000,ko01504 Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PCBEPFIF_00016 9.18e-27 - - - S - - - D-Ala-teichoic acid biosynthesis protein
PCBEPFIF_00017 1.08e-62 - - - - - - - -
PCBEPFIF_00018 2.69e-276 - - - S - - - Membrane
PCBEPFIF_00019 9.78e-107 ykuL - - S - - - (CBS) domain
PCBEPFIF_00020 0.0 cadA - - P - - - P-type ATPase
PCBEPFIF_00021 5.3e-78 - - - - - - - -
PCBEPFIF_00022 5.71e-263 napA - - P - - - Sodium/hydrogen exchanger family
PCBEPFIF_00023 2.49e-63 - - - D ko:K19159 - ko00000,ko02048 Antitoxin component of a toxin-antitoxin (TA) module
PCBEPFIF_00024 8.63e-58 yoeB - - S ko:K19158 - ko00000,ko01000,ko02048 YoeB-like toxin of bacterial type II toxin-antitoxin system
PCBEPFIF_00025 0.0 - - - V ko:K06148 - ko00000,ko02000 ABC transporter transmembrane region
PCBEPFIF_00026 5.95e-204 mutR - - K - - - Helix-turn-helix XRE-family like proteins
PCBEPFIF_00027 2.21e-69 - - - - - - - -
PCBEPFIF_00028 7.21e-157 - - - S ko:K07052 - ko00000 CAAX protease self-immunity
PCBEPFIF_00029 1.11e-242 - - - S - - - DUF218 domain
PCBEPFIF_00030 0.0 - - - V ko:K02003,ko:K02004 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
PCBEPFIF_00031 0.0 ppc 4.1.1.31 - H ko:K01595 ko00620,ko00680,ko00710,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00710,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
PCBEPFIF_00032 5.9e-130 - - - S - - - ECF transporter, substrate-specific component
PCBEPFIF_00033 2.4e-256 tcsA - - S ko:K02058,ko:K07335 - ko00000,ko00002,ko02000 ABC transporter substrate-binding protein PnrA-like
PCBEPFIF_00034 3.28e-257 tcsA - - S ko:K02058,ko:K07335 - ko00000,ko00002,ko02000 ABC transporter substrate-binding protein PnrA-like
PCBEPFIF_00035 0.0 mglA 3.6.3.17 - S ko:K02056,ko:K06400 - ko00000,ko00002,ko01000,ko02000 ABC transporter
PCBEPFIF_00036 8.8e-262 mglC - - S ko:K02057 - ko00000,ko00002,ko02000 Belongs to the binding-protein-dependent transport system permease family
PCBEPFIF_00037 3.63e-221 yufQ - - S ko:K02057 - ko00000,ko00002,ko02000 Belongs to the binding-protein-dependent transport system permease family
PCBEPFIF_00038 3.08e-205 - - - S - - - Aldo/keto reductase family
PCBEPFIF_00039 4.67e-173 nagB 3.5.99.6 - G ko:K02564 ko00520,ko01100,map00520,map01100 ko00000,ko00001,ko01000 Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
PCBEPFIF_00040 2.82e-153 dak 2.7.1.76 - F ko:K10353 ko00230,ko01100,map00230,map01100 ko00000,ko00001,ko01000 deoxynucleoside kinase
PCBEPFIF_00041 2.93e-166 dgk2 2.7.1.76 - F ko:K10353 ko00230,ko01100,map00230,map01100 ko00000,ko00001,ko01000 deoxynucleoside kinase
PCBEPFIF_00042 1.5e-90 - - - - - - - -
PCBEPFIF_00043 6.9e-168 - - - S - - - haloacid dehalogenase-like hydrolase
PCBEPFIF_00044 6.82e-292 pbuG - - S ko:K06901 - ko00000,ko02000 permease
PCBEPFIF_00045 2.4e-118 - - - K - - - Helix-turn-helix XRE-family like proteins
PCBEPFIF_00046 5.78e-100 - - - V ko:K01990 - ko00000,ko00002,ko02000 ATPases associated with a variety of cellular activities
PCBEPFIF_00047 1.71e-187 - - - S - - - ABC-2 family transporter protein
PCBEPFIF_00048 8.93e-163 - - - K - - - helix_turn_helix, mercury resistance
PCBEPFIF_00049 1.89e-294 pbuG - - S ko:K06901 - ko00000,ko02000 permease
PCBEPFIF_00050 3.69e-54 - - - L ko:K07473 - ko00000,ko02048 Addiction module antitoxin, RelB DinJ family
PCBEPFIF_00051 5.05e-11 - - - - - - - -
PCBEPFIF_00052 1.63e-05 - - - S ko:K07124 - ko00000 KR domain
PCBEPFIF_00053 2.35e-07 - - - S ko:K07124 - ko00000 Enoyl-(Acyl carrier protein) reductase
PCBEPFIF_00054 1.54e-51 - - - S ko:K07124 - ko00000 Enoyl-(Acyl carrier protein) reductase
PCBEPFIF_00055 1.43e-44 yneE - - K - - - Transcriptional regulator
PCBEPFIF_00056 1.11e-79 yneE - - K - - - Transcriptional regulator
PCBEPFIF_00057 1.56e-287 - - - S ko:K07133 - ko00000 cog cog1373
PCBEPFIF_00058 1.29e-188 - - - S - - - haloacid dehalogenase-like hydrolase
PCBEPFIF_00059 1.28e-292 pbuG - - S ko:K06901 - ko00000,ko02000 permease
PCBEPFIF_00060 1.28e-38 - - - - - - - -
PCBEPFIF_00061 1.02e-74 - - - K - - - Helix-turn-helix domain
PCBEPFIF_00062 3.89e-102 - - - S ko:K11621 ko02020,map02020 ko00000,ko00001 Putative adhesin
PCBEPFIF_00063 3.36e-100 copY - - K ko:K02171 ko01501,map01501 ko00000,ko00001,ko00002,ko01504,ko03000 Penicillinase repressor
PCBEPFIF_00064 1.2e-83 - - - S - - - Cupredoxin-like domain
PCBEPFIF_00065 7.39e-64 - - - S - - - Cupredoxin-like domain
PCBEPFIF_00066 0.0 copA 3.6.3.3, 3.6.3.5, 3.6.3.54 - P ko:K01534,ko:K17686 ko01524,ko04016,map01524,map04016 ko00000,ko00001,ko01000 P-type ATPase
PCBEPFIF_00067 6.63e-147 crp2 - - K ko:K10914,ko:K21562 ko02020,ko02024,ko02025,ko02026,ko05111,map02020,map02024,map02025,map02026,map05111 ko00000,ko00001,ko03000 helix_turn_helix, cAMP Regulatory protein
PCBEPFIF_00068 3.14e-137 - - - - - - - -
PCBEPFIF_00069 9.16e-316 - - - EGP ko:K08368 - ko00000,ko02000 Sugar (and other) transporter
PCBEPFIF_00070 6.46e-27 - - - - - - - -
PCBEPFIF_00071 1.17e-270 - - - - - - - -
PCBEPFIF_00072 3.95e-108 - - - L - - - An automated process has identified a potential problem with this gene model
PCBEPFIF_00073 2.8e-43 - - - K - - - helix_turn_helix, arabinose operon control protein
PCBEPFIF_00074 2.61e-164 - - - GK - - - ROK family
PCBEPFIF_00075 4.67e-253 - - - V - - - MatE
PCBEPFIF_00076 7.97e-308 - - - V - - - MatE
PCBEPFIF_00077 1.74e-175 - - - L - - - An automated process has identified a potential problem with this gene model
PCBEPFIF_00078 8.29e-76 - - - K - - - Helix-turn-helix XRE-family like proteins
PCBEPFIF_00079 2.29e-40 - - - E - - - Zn peptidase
PCBEPFIF_00080 0.0 eriC - - P ko:K03281 - ko00000 chloride
PCBEPFIF_00081 0.0 gnd 1.1.1.343, 1.1.1.44 - H ko:K00033 ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
PCBEPFIF_00082 0.0 pox1 1.2.3.3 - EH ko:K00158 ko00620,ko01100,map00620,map01100 ko00000,ko00001,ko01000 Belongs to the TPP enzyme family
PCBEPFIF_00083 0.0 gidA - - D ko:K03495 - ko00000,ko03016,ko03036 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
PCBEPFIF_00084 0.0 mnmE - - S ko:K03650 - ko00000,ko01000,ko03016 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
PCBEPFIF_00085 3.37e-192 yidC - - U ko:K03217 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044,ko03029 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PCBEPFIF_00086 1.87e-81 rnpA 3.1.26.5 - J ko:K03536 - ko00000,ko01000,ko03016 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
PCBEPFIF_00087 3.26e-23 rpmH - - J ko:K02914 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL34 family
PCBEPFIF_00088 1.83e-316 dnaA - - L ko:K02313 ko02020,ko04112,map02020,map04112 ko00000,ko00001,ko03032,ko03036 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
PCBEPFIF_00089 5.01e-255 dnaN 2.7.7.7 - L ko:K02338 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
PCBEPFIF_00090 1.13e-48 yaaA - - S ko:K14761 - ko00000,ko03009 S4 domain protein YaaA
PCBEPFIF_00091 1.79e-268 recF - - L ko:K03629 ko03440,map03440 ko00000,ko00001,ko03400 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
PCBEPFIF_00092 0.0 gyrB 5.99.1.3 - L ko:K02470 - ko00000,ko01000,ko03032,ko03400 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PCBEPFIF_00093 0.0 gyrA 5.99.1.3 - L ko:K02469 - ko00000,ko01000,ko03032,ko03400 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PCBEPFIF_00094 1.93e-65 rpsF - - J ko:K02990 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011,ko03029 Binds together with S18 to 16S ribosomal RNA
PCBEPFIF_00095 7.46e-108 ssb - - L ko:K03111 ko03030,ko03430,ko03440,map03030,map03430,map03440 ko00000,ko00001,ko03029,ko03032,ko03400 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
PCBEPFIF_00096 1.89e-47 rpsR - - J ko:K02963 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
PCBEPFIF_00097 0.0 yybT - - T - - - signaling protein consisting of a modified GGDEF domain and a DHH domain
PCBEPFIF_00098 3.87e-97 rplI - - J ko:K02939 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds to the 23S rRNA
PCBEPFIF_00099 0.0 dnaB 3.6.4.12 - L ko:K02314 ko03030,ko04112,map03030,map04112 ko00000,ko00001,ko01000,ko03032 Participates in initiation and elongation during chromosome replication
PCBEPFIF_00100 2.36e-218 phnD - - P ko:K02044 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter, phosphonate, periplasmic substrate-binding protein
PCBEPFIF_00101 1.78e-212 degV1 - - S - - - DegV family
PCBEPFIF_00102 2.99e-216 scrK 2.7.1.4 - GK ko:K00847 ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100 ko00000,ko00001,ko01000 ROK family
PCBEPFIF_00103 3.81e-18 - - - S - - - CsbD-like
PCBEPFIF_00104 7.89e-32 - - - S - - - Transglycosylase associated protein
PCBEPFIF_00105 1.22e-290 - - - I - - - Protein of unknown function (DUF2974)
PCBEPFIF_00106 2.03e-155 - - - S ko:K07507 - ko00000,ko02000 MgtC family
PCBEPFIF_00109 5.49e-41 - - - M - - - Glycosyl transferases group 1
PCBEPFIF_00110 2.26e-143 - - - M - - - Glycosyltransferase, group 1 family protein
PCBEPFIF_00111 1.11e-139 - - - S ko:K07011 - ko00000 Glycosyltransferase like family 2
PCBEPFIF_00112 9.13e-142 cps3J - - M - - - Domain of unknown function (DUF4422)
PCBEPFIF_00113 3.07e-124 rfbP - - M ko:K13012,ko:K19428 - ko00000,ko01000,ko01005 Bacterial sugar transferase
PCBEPFIF_00114 4.68e-186 ywqE 3.1.3.48 - GM ko:K01104 - ko00000,ko01000 PHP domain protein
PCBEPFIF_00115 3.13e-161 ywqD - - D - - - Capsular exopolysaccharide family
PCBEPFIF_00116 1.65e-188 epsB - - M - - - biosynthesis protein
PCBEPFIF_00117 6.98e-242 brpA - - K - - - Cell envelope-like function transcriptional attenuator common domain protein
PCBEPFIF_00118 2.09e-63 yoeB - - S ko:K19158 - ko00000,ko01000,ko02048 YoeB-like toxin of bacterial type II toxin-antitoxin system
PCBEPFIF_00119 9.52e-56 - - - L ko:K07473 - ko00000,ko02048 RelB antitoxin
PCBEPFIF_00121 2.98e-288 hflX - - S ko:K03665 - ko00000,ko03009 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
PCBEPFIF_00122 1.53e-224 - - - S - - - Cysteine-rich secretory protein family
PCBEPFIF_00123 1.25e-18 - - - - - - - -
PCBEPFIF_00124 1.73e-167 - - - M ko:K21471 - ko00000,ko01000,ko01002,ko01011 NlpC/P60 family
PCBEPFIF_00125 1.28e-174 - - - M ko:K21471 - ko00000,ko01000,ko01002,ko01011 NlpC P60 family protein
PCBEPFIF_00126 2.57e-122 - - - M ko:K21471 - ko00000,ko01000,ko01002,ko01011 NlpC/P60 family
PCBEPFIF_00127 3.53e-123 gmk2 2.7.4.8 - F ko:K00942 ko00230,ko01100,map00230,map01100 ko00000,ko00001,ko00002,ko01000 Guanylate kinase homologues.
PCBEPFIF_00128 4.7e-58 - - - - - - - -
PCBEPFIF_00129 0.0 - - - S - - - O-antigen ligase like membrane protein
PCBEPFIF_00130 8.77e-144 - - - - - - - -
PCBEPFIF_00131 1.15e-284 tnpB - - L ko:K07496 - ko00000 Putative transposase DNA-binding domain
PCBEPFIF_00132 1.66e-101 nrdI - - F ko:K03647 - ko00000 NrdI Flavodoxin like
PCBEPFIF_00133 1.02e-228 nrdF 1.17.4.1 - F ko:K00526 ko00230,ko00240,ko01100,map00230,map00240,map01100 ko00000,ko00001,ko00002,ko01000,ko03400 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PCBEPFIF_00134 4.05e-102 - - - - - - - -
PCBEPFIF_00135 1.24e-140 - - - S - - - Peptidase_C39 like family
PCBEPFIF_00136 7.36e-109 - - - S - - - Threonine/Serine exporter, ThrE
PCBEPFIF_00137 2.2e-175 - - - S - - - Putative threonine/serine exporter
PCBEPFIF_00138 0.0 - - - S - - - ABC transporter
PCBEPFIF_00139 1.92e-80 - - - - - - - -
PCBEPFIF_00140 4.4e-132 rimL - - J ko:K03817 - ko00000,ko01000,ko03009 Acetyltransferase (GNAT) domain
PCBEPFIF_00141 7.73e-127 - - - - - - - -
PCBEPFIF_00142 1.97e-160 - - - S ko:K07150 - ko00000 Protein of unknown function (DUF554)
PCBEPFIF_00143 1.01e-274 brpA - - K - - - Cell envelope-like function transcriptional attenuator common domain protein
PCBEPFIF_00144 0.0 pepF - - E ko:K08602 - ko00000,ko01000,ko01002 oligoendopeptidase F
PCBEPFIF_00145 5.92e-18 - - - S - - - Fic/DOC family
PCBEPFIF_00146 7.27e-42 - - - - - - - -
PCBEPFIF_00147 1.47e-91 doc - - S ko:K07341 - ko00000,ko02048 Prophage maintenance system killer protein
PCBEPFIF_00148 5.68e-45 metE 2.1.1.14 - E ko:K00549 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 methionine synthase, vitamin-B12 independent
PCBEPFIF_00149 6.62e-119 metE 2.1.1.14 - E ko:K00549 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 methionine synthase, vitamin-B12 independent
PCBEPFIF_00150 6.6e-115 luxS 4.4.1.21 - H ko:K07173 ko00270,ko01100,ko01230,ko02024,ko02026,ko05111,map00270,map01100,map01230,map02024,map02026,map05111 ko00000,ko00001,ko00002,ko01000 Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
PCBEPFIF_00151 0.0 lctP - - C ko:K03303 - ko00000,ko02000 L-lactate permease
PCBEPFIF_00152 1.59e-172 znuB - - U ko:K02075,ko:K09816 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC 3 transport family
PCBEPFIF_00153 2.6e-149 adcC - - P ko:K02074,ko:K09817,ko:K11710 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ABC transporter
PCBEPFIF_00154 1.92e-206 - - - P ko:K02077 - ko00000,ko00002,ko02000 Belongs to the bacterial solute-binding protein 9 family
PCBEPFIF_00155 3.39e-60 - - - K ko:K21903 - ko00000,ko03000 helix_turn_helix, Arsenical Resistance Operon Repressor
PCBEPFIF_00156 0.0 fruA 2.7.1.202 - GT ko:K02768,ko:K02769,ko:K02770 ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 Phosphotransferase System
PCBEPFIF_00157 2.18e-215 pfkB 2.7.1.56 - H ko:K00882 ko00051,map00051 ko00000,ko00001,ko01000 Belongs to the carbohydrate kinase PfkB family. LacC subfamily
PCBEPFIF_00158 3.14e-175 fruR - - K ko:K03436 - ko00000,ko03000 DeoR C terminal sensor domain
PCBEPFIF_00159 1.57e-279 natB - - CP ko:K01992 - ko00000,ko00002,ko02000 ABC-2 family transporter protein
PCBEPFIF_00160 1.41e-208 natA - - S ko:K01990 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
PCBEPFIF_00161 1.31e-42 - - - - - - - -
PCBEPFIF_00162 1.01e-12 - - - - - - - -
PCBEPFIF_00163 6.87e-88 - - - - - - - -
PCBEPFIF_00164 1.11e-33 - - - - - - - -
PCBEPFIF_00165 6.32e-42 - - - K ko:K07727 - ko00000,ko03000 Transcriptional regulator
PCBEPFIF_00166 5.53e-100 - - - - - - - -
PCBEPFIF_00167 1.26e-22 - - - - - - - -
PCBEPFIF_00169 0.0 agl 3.2.1.20 GH31 G ko:K01187 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 31 family
PCBEPFIF_00170 0.0 glcD 1.1.3.15 - C ko:K00104 ko00630,ko01100,ko01110,ko01120,ko01130,map00630,map01100,map01110,map01120,map01130 ko00000,ko00001,ko01000 FAD linked oxidases, C-terminal domain
PCBEPFIF_00171 7.49e-68 - - - M - - - Glycosyl transferases group 1
PCBEPFIF_00172 1.66e-114 - - - S ko:K07011 - ko00000 Glycosyltransferase like family 2
PCBEPFIF_00173 7.21e-156 - - - S - - - Protein of unknown function (DUF1275)
PCBEPFIF_00174 3.31e-237 manL 2.7.1.191 - G ko:K02793,ko:K02794 ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system sorbose subfamily IIB component
PCBEPFIF_00175 9.65e-181 manY - - G ko:K02746,ko:K02795 ko00051,ko00052,ko00520,ko01100,ko02060,map00051,map00052,map00520,map01100,map02060 ko00000,ko00001,ko00002,ko02000 PTS system
PCBEPFIF_00176 3.51e-222 manN - - G ko:K02796 ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060 ko00000,ko00001,ko00002,ko02000 system, mannose fructose sorbose family IID component
PCBEPFIF_00177 4.58e-82 - - - S - - - Domain of unknown function (DUF956)
PCBEPFIF_00178 6.21e-14 - - - L - - - Psort location Cytoplasmic, score
PCBEPFIF_00179 6.5e-132 - - - L - - - Bifunctional protein
PCBEPFIF_00180 1.76e-182 - - - K - - - Transcriptional regulator
PCBEPFIF_00181 6.59e-93 tnpA1 - - L - - - PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
PCBEPFIF_00182 1.27e-70 - - - L - - - Transposase
PCBEPFIF_00183 2.62e-45 - - - - - - - -
PCBEPFIF_00184 3.86e-300 cycA - - E ko:K03293,ko:K11737 - ko00000,ko02000 Amino acid permease
PCBEPFIF_00185 0.0 adhE 1.1.1.1, 1.2.1.10 - C ko:K04072 ko00010,ko00071,ko00350,ko00620,ko00625,ko00626,ko00650,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00620,map00625,map00626,map00650,map01100,map01110,map01120,map01130,map01220 ko00000,ko00001,ko01000 belongs to the iron- containing alcohol dehydrogenase family
PCBEPFIF_00186 0.0 glmS 2.6.1.16 - M ko:K00820 ko00250,ko00520,ko01100,ko01130,ko04931,map00250,map00520,map01100,map01130,map04931 ko00000,ko00001,ko01000,ko01002 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
PCBEPFIF_00187 0.0 mtlR - - K ko:K03483 - ko00000,ko03000 Mga helix-turn-helix domain
PCBEPFIF_00188 0.0 mtlA 2.7.1.197 - G ko:K02799,ko:K02800 ko00051,ko02060,map00051,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system, Lactose/Cellobiose specific IIB subunit
PCBEPFIF_00189 1.41e-103 mtlF 2.7.1.197 - G ko:K02798 ko00051,ko02060,map00051,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PCBEPFIF_00190 5.68e-279 mtlD 1.1.1.17 - C ko:K00009 ko00051,map00051 ko00000,ko00001,ko01000 mannitol-1-phosphate 5-dehydrogenase activity
PCBEPFIF_00191 1.23e-170 - 4.1.1.44 - S ko:K01607 ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220 ko00000,ko00001,ko01000 Carboxymuconolactone decarboxylase family
PCBEPFIF_00192 1e-43 - - - - - - - -
PCBEPFIF_00193 7.81e-88 - 2.1.1.172 - J ko:K00564,ko:K10716 - ko00000,ko01000,ko02000,ko03009 Ion channel
PCBEPFIF_00194 5.31e-149 rsmC 2.1.1.172 - J ko:K00564 - ko00000,ko01000,ko03009 Methyltransferase
PCBEPFIF_00195 6.15e-36 - - - - - - - -
PCBEPFIF_00196 1.08e-117 tadA 3.5.4.33 - F ko:K11991 - ko00000,ko01000,ko03016 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
PCBEPFIF_00197 0.0 dnaX 2.7.7.7 - L ko:K02343 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PCBEPFIF_00198 1.12e-136 - - - M - - - family 8
PCBEPFIF_00199 1.15e-47 - - - M - - - lipopolysaccharide 3-alpha-galactosyltransferase activity
PCBEPFIF_00200 1.55e-68 yaaK - - S ko:K09747 - ko00000 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
PCBEPFIF_00201 9.21e-142 recR - - L ko:K06187 ko03440,map03440 ko00000,ko00001,ko03400 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
PCBEPFIF_00202 1.18e-46 - - - S - - - Protein of unknown function (DUF2508)
PCBEPFIF_00203 1.15e-146 tmk 2.7.4.9 - F ko:K00943 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
PCBEPFIF_00204 1.58e-70 yaaQ - - S - - - Cyclic-di-AMP receptor
PCBEPFIF_00205 1.45e-199 holB 2.7.7.7 - L ko:K02341 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase III
PCBEPFIF_00206 1.4e-80 yabA - - L - - - Involved in initiation control of chromosome replication
PCBEPFIF_00207 1.84e-201 rsmI 2.1.1.198 - H ko:K07056 - ko00000,ko01000,ko03009 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
PCBEPFIF_00208 1.63e-180 fat 3.1.2.21 - I ko:K01071 ko00061,ko01100,map00061,map01100 ko00000,ko00001,ko01000,ko01004 Acyl-ACP thioesterase
PCBEPFIF_00209 4.5e-113 - - - S - - - ECF transporter, substrate-specific component
PCBEPFIF_00210 1.14e-171 yeaZ 2.3.1.234 - O ko:K01409,ko:K14742 - ko00000,ko01000,ko03016 Universal bacterial protein YeaZ
PCBEPFIF_00211 3.93e-125 rimI 2.3.1.128 - K ko:K03789 - ko00000,ko01000,ko03009 Ribosomal-protein-alanine acetyltransferase
PCBEPFIF_00212 4.42e-249 tsaD 2.3.1.234 - J ko:K01409 - ko00000,ko01000,ko03016 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
PCBEPFIF_00213 2.49e-196 - - - L - - - COG3547 Transposase and inactivated derivatives
PCBEPFIF_00214 2.56e-62 - - - L - - - Transposase
PCBEPFIF_00215 5.11e-108 - - - L ko:K07497 - ko00000 COG2963 Transposase and inactivated derivatives
PCBEPFIF_00216 0.0 ydiF - - S ko:K06158 - ko00000,ko03012 ABC transporter, ATP-binding protein
PCBEPFIF_00217 8.74e-146 rex - - K ko:K01926 - ko00000,ko03000 Modulates transcription in response to changes in cellular NADH NAD( ) redox state
PCBEPFIF_00218 1.29e-235 scrR - - K ko:K03484 - ko00000,ko03000 helix_turn _helix lactose operon repressor
PCBEPFIF_00219 0.0 scrB 3.2.1.26 GH32 G ko:K01193 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 invertase
PCBEPFIF_00220 0.0 scrA 2.7.1.211 - G ko:K02808,ko:K02809,ko:K02810 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 phosphotransferase system
PCBEPFIF_00221 2.14e-231 - - - M - - - CHAP domain
PCBEPFIF_00222 2.79e-102 - - - - - - - -
PCBEPFIF_00223 1.06e-58 groS - - O ko:K04078 - ko00000,ko03029,ko03110 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
PCBEPFIF_00224 0.0 groL - - O ko:K04077 ko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152 ko00000,ko00001,ko03019,ko03029,ko03110,ko04147 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
PCBEPFIF_00225 0.0 mutS - - L ko:K03555 ko03430,map03430 ko00000,ko00001,ko03400 that it carries out the mismatch recognition step. This protein has a weak ATPase activity
PCBEPFIF_00226 0.0 mutL - - L ko:K03572 ko03430,map03430 ko00000,ko00001,ko03400 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
PCBEPFIF_00227 6.73e-133 ruvA 3.6.4.12 - L ko:K03550 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
PCBEPFIF_00228 4.87e-238 ruvB 3.6.4.12 - L ko:K03551 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
PCBEPFIF_00229 7.58e-69 yajC - - U ko:K03210 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Preprotein translocase
PCBEPFIF_00230 0.0 zwf 1.1.1.363, 1.1.1.49 - G ko:K00036 ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,ko05230,map00030,map00480,map01100,map01110,map01120,map01130,map01200,map05230 ko00000,ko00001,ko00002,ko01000,ko04147 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
PCBEPFIF_00231 4.29e-275 dinB 2.7.7.7 - L ko:K02346 - ko00000,ko01000,ko03400 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
PCBEPFIF_00232 5.46e-232 nrnA 3.1.13.3, 3.1.3.7 - S ko:K06881 ko00920,ko01100,ko01120,map00920,map01100,map01120 ko00000,ko00001,ko01000,ko03400 DHHA1 domain protein
PCBEPFIF_00233 1.32e-305 cshB 3.6.4.13 - JKL ko:K05592,ko:K18692 ko03018,map03018 ko00000,ko00001,ko01000,ko03009,ko03019 DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
PCBEPFIF_00234 0.0 alaS 6.1.1.7 - J ko:K01872 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
PCBEPFIF_00235 5.32e-57 yrzL - - S - - - Belongs to the UPF0297 family
PCBEPFIF_00236 9.37e-96 yrrK - - J ko:K07447 - ko00000,ko01000 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
PCBEPFIF_00237 1.67e-66 yrzB - - S - - - Belongs to the UPF0473 family
PCBEPFIF_00238 0.0 mutS2 - - L ko:K07456 ko03430,map03430 ko00000,ko00001,ko03400 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
PCBEPFIF_00239 5.37e-72 trxA - - O ko:K03671 ko04621,ko05418,map04621,map05418 ko00000,ko00001,ko03110 Belongs to the thioredoxin family
PCBEPFIF_00240 2.34e-76 mscL - - M ko:K03282 - ko00000,ko02000 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
PCBEPFIF_00241 5.62e-95 yslB - - S - - - Protein of unknown function (DUF2507)
PCBEPFIF_00242 7.14e-187 murI 3.6.1.66, 5.1.1.3 - M ko:K01776,ko:K02428 ko00230,ko00471,ko01100,map00230,map00471,map01100 ko00000,ko00001,ko01000,ko01011 Provides the (R)-glutamate required for cell wall biosynthesis
PCBEPFIF_00243 2.83e-144 rdgB 3.6.1.66 - F ko:K02428 ko00230,map00230 ko00000,ko00001,ko01000 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
PCBEPFIF_00244 4.28e-187 ykuT - - M ko:K16052,ko:K22044 - ko00000,ko02000 mechanosensitive ion channel
PCBEPFIF_00245 2.96e-23 ytxG - - S - - - protein containing a divergent version of the methyl-accepting chemotaxis-like domain
PCBEPFIF_00246 3.09e-71 - - - - - - - -
PCBEPFIF_00247 1.13e-272 pepQ 3.4.13.9 - E ko:K01271 - ko00000,ko01000,ko01002 Creatinase/Prolidase N-terminal domain
PCBEPFIF_00248 1.5e-232 ccpA - - K ko:K02529 - ko00000,ko03000 catabolite control protein A
PCBEPFIF_00249 0.0 - 3.1.4.46 - C ko:K01126 ko00564,map00564 ko00000,ko00001,ko01000 glycerophosphoryl diester phosphodiesterase
PCBEPFIF_00250 9.89e-74 - - - - - - - -
PCBEPFIF_00251 0.0 sasH 3.1.3.5, 3.1.3.6, 3.1.4.16, 3.6.1.45 - F ko:K01081,ko:K01119,ko:K07004,ko:K08693,ko:K11751 ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110 ko00000,ko00001,ko01000 Belongs to the 5'-nucleotidase family
PCBEPFIF_00252 6.48e-136 yutD - - S - - - Protein of unknown function (DUF1027)
PCBEPFIF_00253 1.1e-184 nagD 3.1.3.41 - G ko:K01101 ko00627,ko01120,map00627,map01120 ko00000,ko00001,ko01000 Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
PCBEPFIF_00254 2.15e-137 - - - S - - - Protein of unknown function (DUF1461)
PCBEPFIF_00255 8.39e-151 dedA - - S ko:K03975 - ko00000 SNARE-like domain protein
PCBEPFIF_00256 1.84e-236 yumC 1.18.1.2, 1.19.1.1 - C ko:K21567 - ko00000,ko01000 Ferredoxin--NADP reductase
PCBEPFIF_00258 2.33e-144 - - - S - - - Conjugative transposon protein TcpC
PCBEPFIF_00259 1.15e-279 B4168_4126 - - L ko:K07493 - ko00000 Transposase
PCBEPFIF_00260 1.4e-111 vatD 2.3.1.79 - S ko:K00661,ko:K18234 - ko00000,ko01000,ko01504 acetyltransferase'
PCBEPFIF_00261 2.34e-41 - - - - - - - -
PCBEPFIF_00262 0.0 malH 3.2.1.122 GH4 G ko:K01232 ko00500,map00500 ko00000,ko00001,ko01000 Family 4 glycosyl hydrolase C-terminal domain
PCBEPFIF_00263 1.43e-176 - - - K ko:K03481 - ko00000,ko03000 Helix-turn-helix domain, rpiR family
PCBEPFIF_00264 4.71e-239 ansA 3.5.1.1 - EJ ko:K01424 ko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110 ko00000,ko00001,ko01000 L-asparaginase, type I
PCBEPFIF_00265 6.6e-14 - - - - - - - -
PCBEPFIF_00266 7.25e-57 - - - - - - - -
PCBEPFIF_00267 6.28e-87 - 2.7.1.191 - G ko:K02793 ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system fructose IIA component
PCBEPFIF_00268 0.0 pacL3 3.6.3.8 - P ko:K01537 - ko00000,ko01000 P-type ATPase
PCBEPFIF_00269 5.45e-162 - - - - - - - -
PCBEPFIF_00270 1.87e-308 - - - S - - - response to antibiotic
PCBEPFIF_00271 7.53e-163 gpm2 - - G - - - Phosphoglycerate mutase family
PCBEPFIF_00272 1.51e-150 XK27_08875 - - O - - - PFAM peptidase M10A and M12B, matrixin and adamalysin
PCBEPFIF_00273 0.0 helD 3.6.4.12 - L ko:K03657 ko03420,ko03430,map03420,map03430 ko00000,ko00001,ko01000,ko03400 DNA helicase
PCBEPFIF_00274 5.41e-142 yecS_2 - - P ko:K02029,ko:K02030 - ko00000,ko00002,ko02000 ABC transporter permease
PCBEPFIF_00275 2.92e-137 glnQ 3.6.3.21 - E ko:K02028 - ko00000,ko00002,ko01000,ko02000 ABC transporter
PCBEPFIF_00276 1.37e-181 aatB - - ET ko:K02030 - ko00000,ko00002,ko02000 ABC transporter substrate-binding protein
PCBEPFIF_00277 8.17e-98 yjcF - - S - - - Acetyltransferase (GNAT) domain
PCBEPFIF_00278 1.13e-126 - - - E - - - GDSL-like Lipase/Acylhydrolase
PCBEPFIF_00279 4.98e-221 coaA 2.7.1.33 - F ko:K00867 ko00770,ko01100,map00770,map01100 ko00000,ko00001,ko00002,ko01000 Pantothenic acid kinase
PCBEPFIF_00280 5.16e-135 efp - - J ko:K02356 - ko00000,ko03012 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
PCBEPFIF_00281 1.59e-131 - - - S - - - Peptidase propeptide and YPEB domain
PCBEPFIF_00282 6.29e-82 - - - S ko:K08987 - ko00000 Protein of unknown function (DUF1304)
PCBEPFIF_00283 1.81e-102 - - - S - - - Uncharacterised protein family (UPF0236)
PCBEPFIF_00284 1.82e-155 - - - S - - - Uncharacterised protein family (UPF0236)
PCBEPFIF_00285 0.0 oppA - - E ko:K02035,ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter, substratebinding protein
PCBEPFIF_00286 1.09e-305 - - - V ko:K06147 - ko00000,ko02000 ABC transporter transmembrane region
PCBEPFIF_00287 1.4e-99 yybA - - K - - - Transcriptional regulator
PCBEPFIF_00288 4.7e-125 XK27_03150 2.3.1.57 - K ko:K22441 - ko00000,ko01000 Acetyltransferase (GNAT) domain
PCBEPFIF_00289 3.49e-123 - - - S - - - Peptidase propeptide and YPEB domain
PCBEPFIF_00290 7.04e-115 ykoJ - - S - - - Peptidase propeptide and YPEB domain
PCBEPFIF_00291 2.62e-315 - - - T - - - GHKL domain
PCBEPFIF_00292 5.23e-170 - - - T - - - Transcriptional regulatory protein, C terminal
PCBEPFIF_00293 1.28e-228 pepR 3.4.11.5 - E ko:K01259 ko00330,map00330 ko00000,ko00001,ko01000,ko01002 Releases the N-terminal proline from various substrates
PCBEPFIF_00294 0.0 - - - V - - - ABC transporter transmembrane region
PCBEPFIF_00295 5.69e-182 - - - S - - - PAS domain
PCBEPFIF_00296 1.09e-214 - - - L - - - Transposase
PCBEPFIF_00297 2.97e-51 - - - L - - - Transposase
PCBEPFIF_00298 7.72e-41 - - - K - - - Bacterial regulatory helix-turn-helix protein, lysR family
PCBEPFIF_00299 7.62e-114 - - - P - - - Major Facilitator Superfamily
PCBEPFIF_00300 8.06e-243 - - - C - - - FAD binding domain
PCBEPFIF_00301 1.17e-150 - - - L - - - COG3385 FOG Transposase and inactivated derivatives
PCBEPFIF_00303 2.82e-182 pnuC - - H ko:K03811 - ko00000,ko02000 nicotinamide mononucleotide transporter
PCBEPFIF_00304 1.3e-94 - - - S - - - Protein of unknown function (DUF3290)
PCBEPFIF_00305 6.39e-150 yviA - - S - - - Protein of unknown function (DUF421)
PCBEPFIF_00306 8.83e-204 - - - K - - - NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
PCBEPFIF_00307 2.7e-232 - 2.7.7.7 - L ko:K02342 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 EXOIII
PCBEPFIF_00308 7.24e-204 endA - - F ko:K15051 - ko00000 DNA RNA non-specific endonuclease
PCBEPFIF_00309 0.0 pepD1 - - E ko:K08659 - ko00000,ko01000,ko01002 Dipeptidase
PCBEPFIF_00310 5.26e-259 malK - - P ko:K10112,ko:K17240 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ATPases associated with a variety of cellular activities
PCBEPFIF_00311 9.47e-202 - - - P ko:K02025 - ko00000,ko00002,ko02000 ABC-type sugar transport systems, permease components
PCBEPFIF_00312 1.61e-186 - - - P ko:K02026 - ko00000,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
PCBEPFIF_00313 0.0 - - - S - - - Zn-dependent metallo-hydrolase RNA specificity domain
PCBEPFIF_00314 2.47e-309 - - - G ko:K02027 - ko00000,ko00002,ko02000 Bacterial extracellular solute-binding protein
PCBEPFIF_00315 1.4e-207 corA - - P ko:K03284 - ko00000,ko02000 CorA-like Mg2+ transporter protein
PCBEPFIF_00316 5.41e-205 - 3.5.2.6 - V ko:K17836 ko00311,ko01130,ko01501,map00311,map01130,map01501 ko00000,ko00001,ko00002,ko01000,ko01504 Beta-lactamase enzyme family
PCBEPFIF_00317 1.08e-127 yobS - - K - - - Bacterial regulatory proteins, tetR family
PCBEPFIF_00318 0.0 ydgH - - S ko:K06994 - ko00000 MMPL family
PCBEPFIF_00320 2.63e-31 - - - K - - - Acetyltransferase (GNAT) domain
PCBEPFIF_00321 1.99e-219 - - - - - - - -
PCBEPFIF_00322 0.0 gabD 1.2.1.16, 1.2.1.20, 1.2.1.79 - C ko:K00135 ko00250,ko00310,ko00350,ko00650,ko00760,ko01100,ko01120,map00250,map00310,map00350,map00650,map00760,map01100,map01120 ko00000,ko00001,ko00002,ko01000 Belongs to the aldehyde dehydrogenase family
PCBEPFIF_00323 4.94e-119 - - - F - - - Nucleoside 2-deoxyribosyltransferase
PCBEPFIF_00324 7.24e-205 plcR - - K ko:K20480 ko02024,map02024 ko00000,ko00001,ko03000 Helix-turn-helix
PCBEPFIF_00325 3.19e-197 - - - I - - - alpha/beta hydrolase fold
PCBEPFIF_00326 3.2e-143 - - - S - - - SNARE associated Golgi protein
PCBEPFIF_00327 4.29e-130 yjcK 2.3.1.128 - J ko:K03790 - ko00000,ko01000,ko03009 Acetyltransferase (GNAT) domain
PCBEPFIF_00328 0.0 serS 6.1.1.11 - J ko:K01875 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
PCBEPFIF_00329 1.12e-61 - - - M - - - LPXTG-motif cell wall anchor domain protein
PCBEPFIF_00330 4.8e-47 - - - M - - - LPXTG-motif cell wall anchor domain protein
PCBEPFIF_00331 8.12e-301 - - - M - - - LPXTG-motif cell wall anchor domain protein
PCBEPFIF_00332 2.92e-161 - - - K - - - Bacterial regulatory proteins, tetR family
PCBEPFIF_00333 1.11e-177 - - - - - - - -
PCBEPFIF_00334 7.43e-97 glnPH2 - - P ko:K02029,ko:K02030 - ko00000,ko00002,ko02000 ABC transporter permease
PCBEPFIF_00335 2.51e-209 glnPH2 - - P ko:K02029,ko:K02030 - ko00000,ko00002,ko02000 ABC transporter permease
PCBEPFIF_00336 1.8e-66 glnQ 3.6.3.21 - E ko:K02028 - ko00000,ko00002,ko01000,ko02000 ABC transporter, ATP-binding protein
PCBEPFIF_00337 1.28e-174 - - - L - - - COG2826 Transposase and inactivated derivatives, IS30 family
PCBEPFIF_00338 6.87e-90 glnQ 3.6.3.21 - E ko:K02028 - ko00000,ko00002,ko01000,ko02000 ABC transporter, ATP-binding protein
PCBEPFIF_00339 4.45e-292 - - - S - - - Cysteine-rich secretory protein family
PCBEPFIF_00340 7.15e-256 ddl 6.3.2.4 - F ko:K01921 ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502 ko00000,ko00001,ko01000,ko01011 Belongs to the D-alanine--D-alanine ligase family
PCBEPFIF_00341 9.96e-164 - - - - - - - -
PCBEPFIF_00342 9.37e-256 yibE - - S - - - overlaps another CDS with the same product name
PCBEPFIF_00343 1.35e-167 yibF - - S - - - overlaps another CDS with the same product name
PCBEPFIF_00344 3.21e-208 - - - I - - - alpha/beta hydrolase fold
PCBEPFIF_00345 0.0 - - - G - - - Belongs to the glycosyl hydrolase 31 family
PCBEPFIF_00346 1.78e-276 nagA 3.5.1.25 - G ko:K01443 ko00520,ko01130,map00520,map01130 ko00000,ko00001,ko01000 Belongs to the metallo-dependent hydrolases superfamily. NagA family
PCBEPFIF_00347 5.88e-167 - - - K - - - Helix-turn-helix XRE-family like proteins
PCBEPFIF_00348 2.84e-35 - - - - - - - -
PCBEPFIF_00349 3.71e-195 thiD 2.7.1.49, 2.7.4.7 - H ko:K00941 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko00002,ko01000 Phosphomethylpyrimidine kinase
PCBEPFIF_00350 0.0 glpK 2.7.1.30 - F ko:K00864 ko00561,ko01100,ko03320,ko04626,map00561,map01100,map03320,map04626 ko00000,ko00001,ko01000,ko04147 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
PCBEPFIF_00351 7.48e-188 - 3.1.3.48 - T ko:K01104 - ko00000,ko01000 Tyrosine phosphatase family
PCBEPFIF_00352 6.36e-230 yvdE - - K - - - helix_turn _helix lactose operon repressor
PCBEPFIF_00353 1.58e-282 ackA 2.7.2.1 - F ko:K00925 ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PCBEPFIF_00354 1.5e-101 XK27_04775 - - S ko:K09155 - ko00000 PAS domain
PCBEPFIF_00355 0.0 malA1 3.2.1.10, 3.2.1.20 GH13,GH31 G ko:K01182,ko:K01187 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 Alpha amylase, catalytic domain
PCBEPFIF_00356 0.0 nplT 3.2.1.133, 3.2.1.135, 3.2.1.54 GH13 G ko:K01208 ko00500,ko01100,map00500,map01100 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 13 family
PCBEPFIF_00357 0.0 mapA 2.4.1.8 GH65 G ko:K00691 ko00500,ko01100,map00500,map01100 ko00000,ko00001,ko01000 hydrolase, family 65, central catalytic
PCBEPFIF_00358 9.37e-150 pgmB 5.4.2.6 - S ko:K01838 ko00500,map00500 ko00000,ko00001,ko01000 beta-phosphoglucomutase
PCBEPFIF_00359 4.23e-268 msmX - - P ko:K10112 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Belongs to the ABC transporter superfamily
PCBEPFIF_00360 2.73e-282 - - - G ko:K15770 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Bacterial extracellular solute-binding protein
PCBEPFIF_00361 9.2e-317 malF - - P ko:K15771 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
PCBEPFIF_00362 1.39e-197 malG - - P ko:K15772 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter permease
PCBEPFIF_00364 1.12e-115 ymdB - - S - - - Macro domain protein
PCBEPFIF_00365 1.13e-289 mdtG2 - - EGP ko:K08161 - ko00000,ko02000 Transporter, major facilitator family protein
PCBEPFIF_00366 3.24e-224 - - - - - - - -
PCBEPFIF_00367 2.2e-79 lysM - - M - - - LysM domain
PCBEPFIF_00368 0.0 pepN 3.4.11.2 - E ko:K01256 ko00480,ko01100,map00480,map01100 ko00000,ko00001,ko01000,ko01002 aminopeptidase
PCBEPFIF_00369 0.0 dtpT - - U ko:K03305 - ko00000 amino acid peptide transporter
PCBEPFIF_00370 1.15e-34 - - - S - - - Sugar efflux transporter for intercellular exchange
PCBEPFIF_00371 6.23e-102 - - - K - - - LytTr DNA-binding domain
PCBEPFIF_00372 5.74e-167 - - - S - - - membrane
PCBEPFIF_00373 5.03e-76 - - - K - - - Helix-turn-helix domain
PCBEPFIF_00374 2.45e-146 ppiB 5.2.1.8 - G ko:K03768 - ko00000,ko01000,ko03110 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
PCBEPFIF_00375 5.18e-222 ppaC 3.6.1.1 - C ko:K15986 ko00190,map00190 ko00000,ko00001,ko01000 inorganic pyrophosphatase
PCBEPFIF_00376 1.11e-234 - - - K - - - Transcriptional regulator
PCBEPFIF_00377 0.0 parC - - L ko:K02621 - ko00000,ko01000,ko02048,ko03032,ko03036 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PCBEPFIF_00378 0.0 parE - - L ko:K02622 - ko00000,ko01000,ko02048,ko03032,ko03036 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PCBEPFIF_00379 9.39e-141 plsY 2.3.1.15 - I ko:K08591 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko01004 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
PCBEPFIF_00380 6.51e-195 snf - - KL - - - domain protein
PCBEPFIF_00381 0.0 snf - - KL - - - domain protein
PCBEPFIF_00382 1.01e-48 - - - - - - - -
PCBEPFIF_00383 1.24e-08 - - - - - - - -
PCBEPFIF_00384 1.19e-136 pncA - - Q - - - Isochorismatase family
PCBEPFIF_00385 3.72e-160 - - - - - - - -
PCBEPFIF_00388 4.13e-83 - - - - - - - -
PCBEPFIF_00389 3.56e-47 - - - - - - - -
PCBEPFIF_00390 9.91e-150 - 3.6.1.66 - F ko:K02428 ko00230,map00230 ko00000,ko00001,ko01000 Ham1 family
PCBEPFIF_00391 1.95e-103 - - - - - - - -
PCBEPFIF_00392 1.12e-307 cpdA - - S - - - Calcineurin-like phosphoesterase
PCBEPFIF_00393 5.87e-278 ypsC - - L ko:K07444 - ko00000,ko01000 Belongs to the methyltransferase superfamily
PCBEPFIF_00394 1.85e-90 gpsB - - D - - - Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
PCBEPFIF_00395 1.18e-139 ypsA - - S - - - Belongs to the UPF0398 family
PCBEPFIF_00396 8.47e-152 recU - - L ko:K03700 - ko00000,ko03400 Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
PCBEPFIF_00397 0.0 ponA 2.4.1.129, 3.4.16.4 GT51 M ko:K05366 ko00550,ko01100,ko01501,map00550,map01100,map01501 ko00000,ko00001,ko01000,ko01003,ko01011 penicillin-binding protein 1A
PCBEPFIF_00398 1.92e-148 nth 4.2.99.18 - L ko:K10773 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
PCBEPFIF_00399 6.91e-149 dnaD - - L ko:K02086 - ko00000 DnaD domain protein
PCBEPFIF_00400 0.0 asnS 6.1.1.22 - J ko:K01893 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Asparaginyl-tRNA synthetase
PCBEPFIF_00401 4.08e-117 ypmB - - S - - - Protein conserved in bacteria
PCBEPFIF_00402 0.0 dinG 3.6.4.12 - L ko:K03722 - ko00000,ko01000,ko03400 helicase involved in DNA repair and perhaps also replication
PCBEPFIF_00403 0.0 addA 3.6.4.12 - L ko:K16898 - ko00000,ko01000,ko03400 ATP-dependent helicase nuclease subunit A
PCBEPFIF_00404 0.0 rexB 3.6.4.12 - L ko:K16899 - ko00000,ko01000,ko03400 The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
PCBEPFIF_00405 7.42e-174 mvk 2.7.1.36 - I ko:K00869 ko00900,ko01100,ko01110,ko01130,ko04146,map00900,map01100,map01110,map01130,map04146 ko00000,ko00001,ko00002,ko01000 GHMP kinases N terminal domain
PCBEPFIF_00406 5.87e-228 mvaD 4.1.1.33 - I ko:K01597 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 diphosphomevalonate decarboxylase
PCBEPFIF_00407 1.34e-260 mvaK2 2.7.4.2 - I ko:K00938 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 phosphomevalonate kinase
PCBEPFIF_00408 4.17e-237 fni 5.3.3.2 - C ko:K01823 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
PCBEPFIF_00409 1.28e-150 - 3.1.3.102, 3.1.3.104, 3.1.3.23 - G ko:K07757,ko:K20861 ko00740,ko01100,ko01110,map00740,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Sucrose-6F-phosphate phosphohydrolase
PCBEPFIF_00410 0.0 rsmF - - J - - - NOL1 NOP2 sun family protein
PCBEPFIF_00411 2.54e-214 - - - - - - - -
PCBEPFIF_00412 5.93e-186 - - - - - - - -
PCBEPFIF_00413 1.27e-133 lepB 3.4.21.89 - U ko:K03100 ko02024,ko03060,map02024,map03060 ko00000,ko00001,ko01000,ko01002 Belongs to the peptidase S26 family
PCBEPFIF_00414 4.6e-38 - - - M - - - Plasmid recombination enzyme
PCBEPFIF_00416 8.73e-234 prs2 2.7.6.1 - F ko:K00948 ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PCBEPFIF_00417 9.7e-73 - - - - - - - -
PCBEPFIF_00418 9.15e-165 - - - S - - - Alpha/beta hydrolase family
PCBEPFIF_00419 2.62e-199 epsV - - S - - - glycosyl transferase family 2
PCBEPFIF_00420 9.18e-187 - - - S - - - Protein of unknown function (DUF1002)
PCBEPFIF_00421 1.2e-188 rnhA 3.1.26.4 - L ko:K03469 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PCBEPFIF_00422 1.76e-232 - - - S - - - Alpha/beta hydrolase of unknown function (DUF915)
PCBEPFIF_00423 0.0 cls - - I ko:K06131 ko00564,ko01100,map00564,map01100 ko00000,ko00001,ko01000 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PCBEPFIF_00424 5.61e-113 - - - - - - - -
PCBEPFIF_00425 5.26e-171 cobB - - K ko:K12410 - ko00000,ko01000 SIR2 family
PCBEPFIF_00426 1.25e-119 adaB 2.1.1.63 - L ko:K00567,ko:K10778,ko:K13531 - ko00000,ko01000,ko03000,ko03400 6-O-methylguanine DNA methyltransferase, DNA binding domain
PCBEPFIF_00427 5.93e-167 terC - - P - - - Integral membrane protein TerC family
PCBEPFIF_00428 3.78e-85 yeaO - - S - - - Protein of unknown function, DUF488
PCBEPFIF_00429 1.41e-155 yxlJ 3.2.2.21 - L ko:K03652 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 Belongs to the DNA glycosylase MPG family
PCBEPFIF_00430 0.0 XK27_05795 - - P ko:K17073,ko:K17074 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter permease
PCBEPFIF_00431 1.49e-175 glnQ - - E ko:K17076 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ABC transporter, ATP-binding protein
PCBEPFIF_00432 4.57e-184 yhaH - - S - - - Protein of unknown function (DUF805)
PCBEPFIF_00433 3.68e-199 - - - L - - - HNH nucleases
PCBEPFIF_00434 2e-157 yfbR - - S ko:K07023 - ko00000 HD containing hydrolase-like enzyme
PCBEPFIF_00435 1.94e-221 - - - G - - - Glycosyl hydrolases family 8
PCBEPFIF_00436 5.91e-204 - - - M - - - Glycosyl transferase
PCBEPFIF_00437 2.58e-43 - - - M - - - Glycosyl transferase
PCBEPFIF_00438 2.77e-10 - - - - - - - -
PCBEPFIF_00439 1.01e-72 - - - - - - - -
PCBEPFIF_00440 9.38e-67 - - - - - - - -
PCBEPFIF_00441 9.69e-25 - - - - - - - -
PCBEPFIF_00442 0.0 glpQ 3.1.4.46 - C ko:K01126 ko00564,map00564 ko00000,ko00001,ko01000 Membrane domain of glycerophosphoryl diester phosphodiesterase
PCBEPFIF_00443 3.34e-92 - - - S - - - Iron-sulphur cluster biosynthesis
PCBEPFIF_00444 1.52e-245 ysdE - - P - - - Citrate transporter
PCBEPFIF_00445 6.05e-127 lemA - - S ko:K03744 - ko00000 LemA family
PCBEPFIF_00446 1.41e-208 htpX - - O ko:K03799 - ko00000,ko00002,ko01000,ko01002 Belongs to the peptidase M48B family
PCBEPFIF_00447 1.05e-222 - - - K - - - helix_turn_helix, arabinose operon control protein
PCBEPFIF_00448 0.0 - - - S ko:K16786,ko:K16787 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ABC transporter, ATP-binding protein
PCBEPFIF_00449 1.96e-113 - - - P ko:K16785 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Cobalt transport protein
PCBEPFIF_00450 3.13e-223 pepI 3.4.11.5 - E ko:K01259 ko00330,map00330 ko00000,ko00001,ko01000,ko01002 Releases the N-terminal proline from various substrates
PCBEPFIF_00451 2.57e-127 - - - G - - - Peptidase_C39 like family
PCBEPFIF_00452 8.64e-107 rlmH 2.1.1.177 - J ko:K00783 - ko00000,ko01000,ko03009 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
PCBEPFIF_00453 2.87e-227 htrA 3.4.21.107 - O ko:K04771 ko01503,ko02020,map01503,map02020 ko00000,ko00001,ko00002,ko01000,ko01002,ko03110 serine protease
PCBEPFIF_00454 3.56e-190 vicX 3.1.26.11 - S ko:K00784 ko03013,map03013 ko00000,ko00001,ko01000,ko03016 domain protein
PCBEPFIF_00455 7.44e-192 yycI - - S - - - YycH protein
PCBEPFIF_00456 0.0 yycH - - S - - - YycH protein
PCBEPFIF_00457 0.0 vicK 2.7.13.3 - T ko:K07652 ko02020,map02020 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Histidine kinase
PCBEPFIF_00458 3.98e-169 yycF - - K ko:K07668 ko02020,map02020 ko00000,ko00001,ko00002,ko02022 response regulator
PCBEPFIF_00460 1.09e-46 - - - - - - - -
PCBEPFIF_00462 3.58e-193 - - - I - - - Acyl-transferase
PCBEPFIF_00463 7.53e-203 arbx - - M - - - Glycosyl transferase family 8
PCBEPFIF_00464 3.31e-237 - - - M - - - Glycosyl transferase family 8
PCBEPFIF_00465 3.7e-233 - - - M - - - Glycosyl transferase family 8
PCBEPFIF_00466 2.76e-215 arbZ - - I - - - Phosphate acyltransferases
PCBEPFIF_00467 3.37e-50 - - - S - - - Cytochrome B5
PCBEPFIF_00468 1.38e-107 - - - J - - - FR47-like protein
PCBEPFIF_00469 4.04e-86 oppA - - E ko:K02035 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter substrate-binding protein
PCBEPFIF_00470 5.08e-119 oppA - - E ko:K02035 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter substrate-binding protein
PCBEPFIF_00471 1.63e-121 apt 2.4.2.7 - F ko:K00759 ko00230,ko01100,map00230,map01100 ko00000,ko00001,ko01000,ko04147 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
PCBEPFIF_00472 0.0 recJ - - L ko:K07462 ko03410,ko03430,ko03440,map03410,map03430,map03440 ko00000,ko00001,ko01000,ko03400 Single-stranded-DNA-specific exonuclease RecJ
PCBEPFIF_00473 7e-131 srtA 3.4.22.70 - M ko:K07284 - ko00000,ko01000,ko01002,ko01011 sortase family
PCBEPFIF_00474 0.0 lepA - - M ko:K03596 ko05134,map05134 ko00000,ko00001 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
PCBEPFIF_00475 9.16e-105 apfA 3.6.1.61 - F ko:K18445 ko00230,map00230 ko00000,ko00001,ko01000 NUDIX domain
PCBEPFIF_00476 1.69e-277 dnaJ - - O ko:K03686 - ko00000,ko03029,ko03110 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
PCBEPFIF_00477 0.0 dnaK - - O ko:K04043 ko03018,ko04212,ko05152,map03018,map04212,map05152 ko00000,ko00001,ko03019,ko03029,ko03110,ko04147 Heat shock 70 kDa protein
PCBEPFIF_00478 1.07e-108 grpE - - O ko:K03687 - ko00000,ko03029,ko03110 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
PCBEPFIF_00479 2.56e-248 hrcA - - K ko:K03705 - ko00000,ko03000 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
PCBEPFIF_00480 3.23e-224 ribF 2.7.1.26, 2.7.7.2 - H ko:K11753 ko00740,ko01100,ko01110,map00740,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Belongs to the ribF family
PCBEPFIF_00481 1.47e-201 truB 5.4.99.25 - J ko:K03177,ko:K03483 - ko00000,ko01000,ko03000,ko03016 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
PCBEPFIF_00482 2.88e-80 rbfA - - J ko:K02834 - ko00000,ko03009 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
PCBEPFIF_00483 0.0 infB - - J ko:K02519 - ko00000,ko03012,ko03029 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
PCBEPFIF_00484 1.61e-64 ylxQ - - J - - - ribosomal protein
PCBEPFIF_00485 3.75e-63 ylxR - - K ko:K07742 - ko00000 Protein of unknown function (DUF448)
PCBEPFIF_00486 8.73e-262 nusA - - K ko:K02600 - ko00000,ko03009,ko03021 Participates in both transcription termination and antitermination
PCBEPFIF_00487 3.4e-108 rimP - - J ko:K09748 - ko00000,ko03009 Required for maturation of 30S ribosomal subunits
PCBEPFIF_00488 0.0 polC 2.7.7.7 - L ko:K03763 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PCBEPFIF_00489 0.0 proS 6.1.1.15 - J ko:K01881 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
PCBEPFIF_00490 3.02e-252 rseP - - M ko:K11749 ko02024,ko04112,map02024,map04112 ko00000,ko00001,ko01000,ko01002 zinc metalloprotease
PCBEPFIF_00491 2.88e-183 cdsA 2.7.7.41 - I ko:K00981 ko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070 ko00000,ko00001,ko00002,ko01000 Belongs to the CDS family
PCBEPFIF_00492 6.38e-178 uppS 2.5.1.31 - H ko:K00806 ko00900,ko01110,map00900,map01110 ko00000,ko00001,ko01000,ko01006 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
PCBEPFIF_00493 1.22e-121 frr - - J ko:K02838 - ko00000,ko03012 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
PCBEPFIF_00494 5.86e-168 pyrH 2.7.4.22 - F ko:K09903 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko01000 Catalyzes the reversible phosphorylation of UMP to UDP
PCBEPFIF_00495 1.76e-235 tsf - - J ko:K02357 - ko00000,ko03012,ko03029 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
PCBEPFIF_00496 2.21e-180 rpsB - - J ko:K02967 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the universal ribosomal protein uS2 family
PCBEPFIF_00497 3.23e-248 yabB 2.1.1.223 - L ko:K07461,ko:K15460 - ko00000,ko01000,ko03016 Methyltransferase small domain
PCBEPFIF_00498 2.08e-145 plsC 2.3.1.51 - I ko:K00655 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko01004 Acyltransferase
PCBEPFIF_00499 6.74e-288 cfa 2.1.1.79 - M ko:K00574 - ko00000,ko01000 cyclopropane-fatty-acyl-phospholipid synthase
PCBEPFIF_00500 1.59e-127 - - - L - - - An automated process has identified a potential problem with this gene model
PCBEPFIF_00501 3.41e-146 - - - L - - - Resolvase, N-terminal
PCBEPFIF_00502 2.07e-284 tnpB - - L ko:K07496 - ko00000 Putative transposase DNA-binding domain
PCBEPFIF_00503 3.12e-171 - - - S - - - SLAP domain
PCBEPFIF_00504 5.53e-52 oppA - - E ko:K02035 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter substrate-binding protein
PCBEPFIF_00505 0.0 oppA - - E ko:K02035 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter substrate-binding protein
PCBEPFIF_00506 5.99e-111 dps - - P ko:K04047 - ko00000,ko03036 Belongs to the Dps family
PCBEPFIF_00507 5.69e-39 npr 1.11.1.1 - C ko:K05910 - ko00000,ko01000 NADH oxidase
PCBEPFIF_00508 0.0 pepO - - O ko:K07386 - ko00000,ko01000,ko01002 Peptidase family M13
PCBEPFIF_00509 0.0 mdlB - - V ko:K06147,ko:K18890 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter
PCBEPFIF_00510 0.0 mdlA - - V ko:K06148,ko:K18889 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter
PCBEPFIF_00511 6.43e-41 XK26_06720 - - S ko:K09976 - ko00000 Uncharacterised protein family (UPF0154)
PCBEPFIF_00512 4.16e-51 ynzC - - S - - - UPF0291 protein
PCBEPFIF_00513 9.86e-146 lexA 3.4.21.88 - K ko:K01356 - ko00000,ko00002,ko01000,ko01002,ko03400 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
PCBEPFIF_00514 3.05e-188 - - - E - - - GDSL-like Lipase/Acylhydrolase family
PCBEPFIF_00515 6.91e-156 ung2 3.2.2.27 - L ko:K21929 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 Uracil-DNA glycosylase
PCBEPFIF_00516 5.4e-274 - - - S - - - SLAP domain
PCBEPFIF_00517 1.64e-74 rplS - - J ko:K02884 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
PCBEPFIF_00518 6.91e-175 trmD 2.1.1.228 - J ko:K00554 - ko00000,ko01000,ko03016 Belongs to the RNA methyltransferase TrmD family
PCBEPFIF_00519 2.08e-122 rimM - - J ko:K02860 - ko00000,ko03009 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
PCBEPFIF_00520 6.78e-60 rpsP - - J ko:K02959 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011,ko03029 Belongs to the bacterial ribosomal protein bS16 family
PCBEPFIF_00521 4.01e-291 ffh 3.6.5.4 - U ko:K03106 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko01000,ko02044 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
PCBEPFIF_00522 6.76e-73 ylxM - - S ko:K09787 - ko00000 Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
PCBEPFIF_00523 0.0 ctrA - - E ko:K03294 - ko00000 amino acid
PCBEPFIF_00524 0.0 - - - V ko:K02004 - ko00000,ko00002,ko02000 FtsX-like permease family
PCBEPFIF_00525 1.89e-172 cysA - - V ko:K02003 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
PCBEPFIF_00526 0.0 pepD2 - - E ko:K08659 - ko00000,ko01000,ko01002 Dipeptidase
PCBEPFIF_00527 1.41e-227 ftsY - - U ko:K03110 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
PCBEPFIF_00528 0.0 smc - - D ko:K03529 - ko00000,ko03036 Required for chromosome condensation and partitioning
PCBEPFIF_00529 2.8e-160 rnc 3.1.26.3 - J ko:K03685 ko03008,ko05205,map03008,map05205 ko00000,ko00001,ko01000,ko03009,ko03019,ko03036 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
PCBEPFIF_00530 0.0 oppA - - E ko:K02035 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter substrate-binding protein
PCBEPFIF_00531 0.0 oppA - - E ko:K02035 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter substrate-binding protein
PCBEPFIF_00532 3.06e-181 oppC5 - - P ko:K02034 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
PCBEPFIF_00533 4.58e-220 oppB - - P ko:K02033,ko:K02034 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter permease
PCBEPFIF_00534 2.57e-226 oppF - - P ko:K02032 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 Belongs to the ABC transporter superfamily
PCBEPFIF_00535 1.21e-245 oppD - - P ko:K02031,ko:K15583 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 Belongs to the ABC transporter superfamily
PCBEPFIF_00536 4.4e-47 acpP - - IQ ko:K02078 - ko00000,ko00001 Carrier of the growing fatty acid chain in fatty acid biosynthesis
PCBEPFIF_00537 3.69e-233 plsX 2.3.1.15 - I ko:K03621 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko01004 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
PCBEPFIF_00538 0.0 recG 3.6.4.12 - L ko:K03655 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
PCBEPFIF_00539 0.0 yloV - - S ko:K07030 - ko00000 DAK2 domain fusion protein YloV
PCBEPFIF_00540 8.29e-75 yloU - - S - - - Asp23 family, cell envelope-related function
PCBEPFIF_00541 1.33e-35 rpmB - - J ko:K02902 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL28 family
PCBEPFIF_00542 7.76e-160 thiN 2.7.6.2 - H ko:K00949 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko01000 thiamine pyrophosphokinase
PCBEPFIF_00543 2.61e-154 rpe 5.1.3.1 - G ko:K01783 ko00030,ko00040,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the ribulose-phosphate 3-epimerase family
PCBEPFIF_00544 4.38e-211 rsgA 3.1.3.100 - S ko:K06949 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko01000,ko03009 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
PCBEPFIF_00545 0.0 prkC 2.7.11.1 - KLT ko:K08884,ko:K12132 - ko00000,ko01000,ko01001 serine threonine protein kinase
PCBEPFIF_00546 1.98e-180 stp 3.1.3.16 - T ko:K20074 - ko00000,ko01000,ko01009 phosphatase
PCBEPFIF_00547 7.82e-311 sun 2.1.1.176 - J ko:K03500 - ko00000,ko01000,ko03009 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
PCBEPFIF_00548 3.11e-220 fmt 2.1.2.9 - J ko:K00604 ko00670,ko00970,map00670,map00970 ko00000,ko00001,ko01000 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
PCBEPFIF_00549 0.0 priA - - L ko:K04066 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
PCBEPFIF_00550 2.37e-46 rpoZ 2.7.7.6 - K ko:K03060 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
PCBEPFIF_00551 5.97e-145 gmk 2.7.4.8 - F ko:K00942 ko00230,ko01100,map00230,map01100 ko00000,ko00001,ko00002,ko01000 Essential for recycling GMP and indirectly, cGMP
PCBEPFIF_00552 2.19e-100 - - - S - - - ASCH
PCBEPFIF_00553 0.0 recN - - L ko:K03631 - ko00000,ko03400 May be involved in recombinational repair of damaged DNA
PCBEPFIF_00554 7.22e-197 rrmJ 2.1.1.226, 2.1.1.227 - J ko:K06442 - ko00000,ko01000,ko03009 Ribosomal RNA large subunit methyltransferase J
PCBEPFIF_00555 4.72e-207 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29 - H ko:K13789 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000,ko01006 Belongs to the FPP GGPP synthase family
PCBEPFIF_00556 1.53e-47 xseB 3.1.11.6 - L ko:K03602 ko03430,map03430 ko00000,ko00001,ko01000,ko03400 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PCBEPFIF_00557 1.97e-248 xseA 3.1.11.6 - L ko:K03601 ko03430,map03430 ko00000,ko00001,ko01000,ko03400 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PCBEPFIF_00558 7.09e-190 folD 1.5.1.5, 3.5.4.9 - F ko:K01491 ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
PCBEPFIF_00559 3.38e-86 nusB - - K ko:K03625 - ko00000,ko03009,ko03021 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
PCBEPFIF_00560 7.98e-93 WQ51_04310 - - S ko:K10947 - ko00000,ko03000 Asp23 family, cell envelope-related function
PCBEPFIF_00561 2.11e-133 efp - - J ko:K02356 - ko00000,ko03012 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
PCBEPFIF_00562 2.14e-257 pepP 3.4.11.9, 3.4.13.9 - E ko:K01262,ko:K01271 - ko00000,ko01000,ko01002 Creatinase/Prolidase N-terminal domain
PCBEPFIF_00563 3.94e-64 rpmA - - J ko:K02899 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL27 family
PCBEPFIF_00564 6.82e-66 rplU - - J ko:K02888 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This protein binds to 23S rRNA in the presence of protein L20
PCBEPFIF_00565 1.5e-193 - - - S - - - Uncharacterised 5xTM membrane BCR, YitT family COG1284
PCBEPFIF_00566 0.0 - - - S - - - Uncharacterized protein conserved in bacteria (DUF2325)
PCBEPFIF_00568 2.07e-38 dmpI 5.3.2.6 - G ko:K01821 ko00362,ko00621,ko00622,ko01100,ko01120,ko01220,map00362,map00621,map00622,map01100,map01120,map01220 ko00000,ko00001,ko00002,ko01000 Belongs to the 4-oxalocrotonate tautomerase family
PCBEPFIF_00569 0.0 - - - S - - - Predicted membrane protein (DUF2207)
PCBEPFIF_00570 6.03e-202 cinI - - S ko:K06889 - ko00000 Serine hydrolase (FSH1)
PCBEPFIF_00571 2.99e-272 - - - M ko:K07273 - ko00000 Glycosyl hydrolases family 25
PCBEPFIF_00573 6.1e-228 lipA - - I - - - Carboxylesterase family
PCBEPFIF_00574 1.82e-86 yusI 1.20.4.1 - P ko:K00537 - ko00000,ko01000 Belongs to the ArsC family
PCBEPFIF_00575 0.0 - - - V ko:K06148 - ko00000,ko02000 ABC-type multidrug transport system, ATPase and permease components
PCBEPFIF_00576 0.0 - - - V ko:K06148 - ko00000,ko02000 ABC-type multidrug transport system, ATPase and permease components
PCBEPFIF_00577 2.72e-197 supH - - S - - - haloacid dehalogenase-like hydrolase
PCBEPFIF_00578 4.33e-69 - - - - - - - -
PCBEPFIF_00579 8.51e-50 - - - - - - - -
PCBEPFIF_00580 1.9e-56 - - - S - - - Alpha beta hydrolase
PCBEPFIF_00581 3.65e-109 - - - M - - - NlpC/P60 family
PCBEPFIF_00582 1.11e-170 cobQ - - S ko:K07009 - ko00000 glutamine amidotransferase
PCBEPFIF_00584 7.54e-90 - - - L - - - RelB antitoxin
PCBEPFIF_00585 4.24e-37 - - - - - - - -
PCBEPFIF_00586 3.85e-193 - - - - - - - -
PCBEPFIF_00587 1.26e-176 - - - - - - - -
PCBEPFIF_00588 6.73e-180 - - - - - - - -
PCBEPFIF_00589 1.81e-159 - - - V ko:K01990 - ko00000,ko00002,ko02000 ATPases associated with a variety of cellular activities
PCBEPFIF_00590 1.85e-82 lexA - - K ko:K07979 - ko00000,ko03000 Transcriptional regulator, GntR family
PCBEPFIF_00591 5.76e-307 pepT 3.4.11.4 - E ko:K01258 - ko00000,ko01000,ko01002 Cleaves the N-terminal amino acid of tripeptides
PCBEPFIF_00592 5.72e-196 yqfO - - S - - - Belongs to the GTP cyclohydrolase I type 2 NIF3 family
PCBEPFIF_00593 2.3e-158 trmK 2.1.1.217 - S ko:K06967 - ko00000,ko01000,ko03016 SAM-dependent methyltransferase
PCBEPFIF_00594 5.37e-106 - 3.6.1.55 - F ko:K03574 - ko00000,ko01000,ko03400 NUDIX domain
PCBEPFIF_00595 1.51e-166 - - - S - - - Peptidase family M23
PCBEPFIF_00596 9e-255 sigA - - K ko:K03086 - ko00000,ko03021 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
PCBEPFIF_00597 0.0 dnaG - - L ko:K02316 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
PCBEPFIF_00598 0.0 glyS 6.1.1.14 - J ko:K01879 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Glycyl-tRNA synthetase beta subunit
PCBEPFIF_00599 9.03e-229 glyQ 6.1.1.14 - J ko:K01878 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 glycyl-tRNA synthetase alpha subunit
PCBEPFIF_00600 7.11e-174 recO - - L ko:K03584 ko03440,map03440 ko00000,ko00001,ko03400 Involved in DNA repair and RecF pathway recombination
PCBEPFIF_00601 1.02e-299 - - - L ko:K07496 - ko00000 transposase, IS605 OrfB family
PCBEPFIF_00602 1.37e-216 era - - S ko:K03595 - ko00000,ko03009,ko03029 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
PCBEPFIF_00603 3.58e-129 ybeY - - S ko:K07042 - ko00000,ko03009 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
PCBEPFIF_00604 1.74e-224 phoH - - T ko:K06217 - ko00000 phosphate starvation-inducible protein PhoH
PCBEPFIF_00605 3.75e-93 yqeY - - S ko:K09117 - ko00000 YqeY-like protein
PCBEPFIF_00606 4.83e-30 rpsU - - J ko:K02970 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bS21 family
PCBEPFIF_00607 6.94e-199 yqfL 2.7.11.33, 2.7.4.28 - F ko:K09773 - ko00000,ko01000 Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
PCBEPFIF_00608 5.49e-88 apfA 3.6.1.61 - F ko:K18445 ko00230,map00230 ko00000,ko00001,ko01000 Nudix hydrolase
PCBEPFIF_00609 6.94e-202 - - - K - - - Helix-turn-helix XRE-family like proteins
PCBEPFIF_00611 0.0 - - - V ko:K06147,ko:K06148 - ko00000,ko02000 ABC transporter transmembrane region
PCBEPFIF_00612 0.0 pckA 4.1.1.49 - H ko:K01610 ko00010,ko00020,ko00620,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00710,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Phosphoenolpyruvate carboxykinase
PCBEPFIF_00613 0.0 - - - S - - - TerB-C domain
PCBEPFIF_00614 0.0 - - - P - - - P-loop Domain of unknown function (DUF2791)
PCBEPFIF_00615 0.0 - - - L ko:K03724 - ko00000,ko01000,ko03400 DEAD DEAH box helicase
PCBEPFIF_00616 1.31e-77 - - - - - - - -
PCBEPFIF_00617 2.32e-184 nfrA 1.5.1.38 - C ko:K19285 ko00740,ko01100,map00740,map01100 ko00000,ko00001,ko01000 nitroreductase
PCBEPFIF_00619 2.84e-80 psiE - - S ko:K13256 - ko00000 Phosphate-starvation-inducible E
PCBEPFIF_00620 6.24e-145 - 2.3.1.79 - S ko:K00661 - ko00000,ko01000 Maltose acetyltransferase
PCBEPFIF_00621 1.09e-91 - - - S - - - Iron-sulphur cluster biosynthesis
PCBEPFIF_00623 2.54e-42 - - - - - - - -
PCBEPFIF_00624 1.33e-210 pphA 3.1.3.16 - T ko:K07313 - ko00000,ko01000 Calcineurin-like phosphoesterase
PCBEPFIF_00625 1.25e-17 - - - - - - - -
PCBEPFIF_00626 5.52e-152 - - - L - - - Resolvase, N-terminal
PCBEPFIF_00627 0.0 - - - L ko:K07496 - ko00000 Putative transposase DNA-binding domain
PCBEPFIF_00628 9.18e-302 licC - - G ko:K02761 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko02000 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PCBEPFIF_00629 8.01e-132 - - - M - - - LysM domain protein
PCBEPFIF_00630 8.45e-213 - - - D - - - nuclear chromosome segregation
PCBEPFIF_00631 2.99e-134 - - - G - - - Phosphoglycerate mutase family
PCBEPFIF_00632 4.99e-112 - - - G - - - Histidine phosphatase superfamily (branch 1)
PCBEPFIF_00633 1.13e-145 - - - G - - - Antibiotic biosynthesis monooxygenase
PCBEPFIF_00634 4.24e-145 glpQ1 3.1.4.46 - C ko:K01126 ko00564,map00564 ko00000,ko00001,ko01000 glycerophosphoryl diester phosphodiesterase
PCBEPFIF_00636 1.06e-279 araT 2.6.1.57 - E ko:K00832,ko:K00841 ko00270,ko00300,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01230,map00270,map00300,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Aminotransferase
PCBEPFIF_00637 3.58e-238 XK27_10475 - - S - - - Oxidoreductase family, NAD-binding Rossmann fold
PCBEPFIF_00638 3.1e-147 rpiA1 5.3.1.6 - G ko:K01807 ko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
PCBEPFIF_00639 6.5e-183 - - - K - - - SIS domain
PCBEPFIF_00640 1.66e-309 slpX - - S - - - SLAP domain
PCBEPFIF_00641 6.39e-32 - - - S - - - transposase or invertase
PCBEPFIF_00642 1.48e-14 - - - - - - - -
PCBEPFIF_00643 7.62e-306 npr 1.11.1.1 - C ko:K05910 - ko00000,ko01000 NADH oxidase
PCBEPFIF_00646 0.0 oppA2 - - E ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter, substratebinding protein
PCBEPFIF_00647 5.33e-233 - - - - - - - -
PCBEPFIF_00648 1.87e-159 gntR1 - - K ko:K03710 - ko00000,ko03000 UTRA
PCBEPFIF_00649 3.68e-93 tagD 2.7.7.39 - IM ko:K00980 ko00564,map00564 ko00000,ko00001,ko01000 Glycerol-3-phosphate cytidylyltransferase
PCBEPFIF_00650 5.23e-172 tagA 2.4.1.187 GT26 F ko:K05946 ko05111,map05111 ko00000,ko00001,ko01000,ko01003 Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
PCBEPFIF_00651 2.52e-262 - - - M - - - Glycosyl transferases group 1
PCBEPFIF_00652 0.0 pncB 6.3.4.21 - F ko:K00763 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko01000 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
PCBEPFIF_00653 6.65e-196 nadE 6.3.1.5 - F ko:K01916 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
PCBEPFIF_00654 0.0 pacL 3.6.3.8 - P ko:K01537 - ko00000,ko01000 P-type ATPase
PCBEPFIF_00655 9.16e-287 - - - M - - - CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
PCBEPFIF_00656 0.0 epsU - - S ko:K03328 - ko00000 Polysaccharide biosynthesis protein
PCBEPFIF_00657 7.79e-173 - - - M - - - Glycosyltransferase sugar-binding region containing DXD motif
PCBEPFIF_00658 4.53e-110 ydcK - - S ko:K03095 - ko00000 Belongs to the SprT family
PCBEPFIF_00660 6.64e-127 acmA 3.2.1.17, 3.2.1.96 - NU ko:K01185,ko:K01227 ko00511,map00511 ko00000,ko00001,ko01000 mannosyl-glycoprotein
PCBEPFIF_00661 0.0 pcrA 3.6.4.12 - L ko:K03657 ko03420,ko03430,map03420,map03430 ko00000,ko00001,ko01000,ko03400 ATP-dependent DNA helicase
PCBEPFIF_00662 0.0 ligA 6.5.1.2 - L ko:K01972 ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430 ko00000,ko00001,ko01000,ko03032,ko03400 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
PCBEPFIF_00663 2.54e-267 camS - - S - - - sex pheromone
PCBEPFIF_00664 5.42e-67 gatC 6.3.5.6, 6.3.5.7 - J ko:K02435 ko00970,ko01100,map00970,map01100 ko00000,ko00001,ko01000,ko03029 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PCBEPFIF_00665 0.0 gatA 6.3.5.6, 6.3.5.7 - J ko:K02433 ko00970,ko01100,map00970,map01100 ko00000,ko00001,ko01000,ko03029 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
PCBEPFIF_00666 0.0 gatB 6.3.5.6, 6.3.5.7 - J ko:K02434 ko00970,ko01100,map00970,map01100 ko00000,ko00001,ko01000,ko03029 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PCBEPFIF_00667 7.93e-219 dagK 2.7.1.107 - G ko:K07029 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 ko00000,ko00001,ko01000 Lipid kinase
PCBEPFIF_00668 2.61e-148 ybhL - - S ko:K06890 - ko00000 Belongs to the BI1 family
PCBEPFIF_00669 1.46e-75 - - - - - - - -
PCBEPFIF_00670 7.35e-129 - - - I - - - transferase activity, transferring acyl groups other than amino-acyl groups
PCBEPFIF_00671 2.79e-309 nhaC - - C ko:K03315 - ko00000,ko02000 Na H antiporter NhaC
PCBEPFIF_00672 1.01e-256 flp - - V - - - Beta-lactamase
PCBEPFIF_00673 0.0 rumA_2 2.1.1.190 - J ko:K03215 - ko00000,ko01000,ko03009 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PCBEPFIF_00674 1.42e-122 - - - K - - - Acetyltransferase (GNAT) domain
PCBEPFIF_00679 3.41e-316 qacA - - EGP - - - Major Facilitator
PCBEPFIF_00680 1.52e-119 - - - K - - - Bacterial regulatory proteins, tetR family
PCBEPFIF_00681 0.0 - 4.2.1.53 - S ko:K10254 - ko00000,ko01000 Myosin-crossreactive antigen
PCBEPFIF_00682 6.1e-101 - - - K - - - acetyltransferase
PCBEPFIF_00683 5.09e-65 - - - K - - - Bacteriophage CI repressor helix-turn-helix domain
PCBEPFIF_00684 1.23e-189 - - - G ko:K02796 ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060 ko00000,ko00001,ko00002,ko02000 PTS system mannose/fructose/sorbose family IID component
PCBEPFIF_00685 4.95e-179 - - - G ko:K02795 ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060 ko00000,ko00001,ko00002,ko02000 PTS system sorbose-specific iic component
PCBEPFIF_00686 1.82e-156 - 2.7.1.191 - G ko:K02793,ko:K02794 ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system sorbose subfamily IIB component
PCBEPFIF_00689 4.19e-69 - - - - - - - -
PCBEPFIF_00690 1.3e-28 - - - K - - - Helix-turn-helix XRE-family like proteins
PCBEPFIF_00691 8.95e-54 - - - S - - - Filamentation induced by cAMP protein fic
PCBEPFIF_00692 2.93e-136 - - - K - - - Psort location CytoplasmicMembrane, score
PCBEPFIF_00693 1.73e-217 - - - V ko:K01990,ko:K19309 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter
PCBEPFIF_00694 4.05e-163 - - - S ko:K19310 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC-2 family transporter protein
PCBEPFIF_00695 8.61e-52 uppP 3.6.1.27 - V ko:K06153 ko00550,map00550 ko00000,ko00001,ko01000,ko01011 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
PCBEPFIF_00696 3.22e-15 uppP 3.6.1.27 - V ko:K06153 ko00550,map00550 ko00000,ko00001,ko01000,ko01011 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
PCBEPFIF_00697 1.52e-202 - 1.1.1.346 - S ko:K06221 - ko00000,ko01000 reductase
PCBEPFIF_00698 5.12e-302 pyrP - - F ko:K02824 - ko00000,ko02000 Permease
PCBEPFIF_00699 7.16e-116 pyrR 2.4.2.9 - F ko:K02825 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko01000,ko03000 Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
PCBEPFIF_00700 0.0 qacA - - EGP - - - Major Facilitator
PCBEPFIF_00701 1.27e-211 pmrA - - EGP ko:K08161 - ko00000,ko02000 MFS_1 like family
PCBEPFIF_00702 4e-35 pmrA - - EGP ko:K08161 - ko00000,ko02000 MFS_1 like family
PCBEPFIF_00703 2.7e-172 - - - - - - - -
PCBEPFIF_00704 5.34e-134 - - - - - - - -
PCBEPFIF_00705 1.07e-266 pepA - - E - - - M42 glutamyl aminopeptidase
PCBEPFIF_00706 0.0 ykpA - - S - - - ABC transporter, ATP-binding protein
PCBEPFIF_00707 6.07e-223 ydhF - - S - - - Aldo keto reductase
PCBEPFIF_00708 1.51e-192 - - - - - - - -
PCBEPFIF_00709 4.42e-306 steT - - E ko:K03294 - ko00000 amino acid
PCBEPFIF_00710 2.92e-313 steT - - E ko:K03294 - ko00000 amino acid
PCBEPFIF_00711 6.43e-167 - - - F - - - glutamine amidotransferase
PCBEPFIF_00712 5.02e-189 peb1A - - ET ko:K10039 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter
PCBEPFIF_00713 2.53e-106 - - - K - - - Transcriptional regulator, MarR family
PCBEPFIF_00714 0.0 XK27_09600 - - V ko:K06147,ko:K18891 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter, ATP-binding protein
PCBEPFIF_00715 0.0 XK27_09605 - - V ko:K18892 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter transmembrane region
PCBEPFIF_00716 1.79e-131 ykoE - - S ko:K16925 - ko00000,ko00002,ko02000 ABC-type cobalt transport system, permease component
PCBEPFIF_00717 1.54e-14 - - - G - - - MFS/sugar transport protein
PCBEPFIF_00718 8.98e-295 - - - G - - - MFS/sugar transport protein
PCBEPFIF_00719 4.52e-147 udk 2.7.1.48 - F ko:K00876 ko00240,ko00983,ko01100,map00240,map00983,map01100 ko00000,ko00001,ko01000 Zeta toxin
PCBEPFIF_00720 1.19e-174 glnQ - - E ko:K10041 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ABC transporter, ATP-binding protein
PCBEPFIF_00721 3.16e-192 glnH - - ET ko:K10039 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter substrate-binding protein
PCBEPFIF_00722 7.42e-123 glnM - - P ko:K10040 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter permease
PCBEPFIF_00723 3.65e-141 glnP - - P ko:K10040 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter permease
PCBEPFIF_00724 1.21e-210 - - - S - - - Protein of unknown function (DUF2974)
PCBEPFIF_00725 6e-110 - - - - - - - -
PCBEPFIF_00726 2.89e-295 - - - S - - - Uncharacterized protein conserved in bacteria (DUF2325)
PCBEPFIF_00727 2.2e-308 srrA1 - - G ko:K02027,ko:K17244 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Bacterial extracellular solute-binding protein
PCBEPFIF_00728 7.29e-209 - - - C - - - Domain of unknown function (DUF4931)
PCBEPFIF_00729 2.09e-215 rbsK 2.7.1.15 - H ko:K00852 ko00030,map00030 ko00000,ko00001,ko01000 Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PCBEPFIF_00730 1.56e-162 rpiA 5.3.1.6 - G ko:K01807 ko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
PCBEPFIF_00731 0.0 kup - - P ko:K03549 - ko00000,ko02000 Transport of potassium into the cell
PCBEPFIF_00732 4.99e-223 rihC 3.2.2.1 - F ko:K01239,ko:K01250,ko:K12700 ko00230,ko00760,ko01100,map00230,map00760,map01100 ko00000,ko00001,ko01000 Nucleoside
PCBEPFIF_00733 1.9e-173 gntR - - K - - - UbiC transcription regulator-associated domain protein
PCBEPFIF_00734 5.27e-197 - 3.1.3.102, 3.1.3.104 - S ko:K20861 ko00740,ko01100,ko01110,map00740,map01100,map01110 ko00000,ko00001,ko00002,ko01000 hydrolase
PCBEPFIF_00735 1.18e-78 - - - S - - - Enterocin A Immunity
PCBEPFIF_00736 3.26e-176 - - - K ko:K22103 - ko00000,ko03000 DeoR C terminal sensor domain
PCBEPFIF_00737 0.0 xfp 4.1.2.22, 4.1.2.9 - G ko:K01621 ko00030,ko00710,ko01100,ko01120,map00030,map00710,map01100,map01120 ko00000,ko00001,ko01000 Phosphoketolase
PCBEPFIF_00738 8.1e-200 - - - S - - - Phospholipase, patatin family
PCBEPFIF_00739 3.84e-191 - - - S - - - hydrolase
PCBEPFIF_00740 0.0 glvC 2.7.1.208 - G ko:K02749,ko:K02750 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 phosphotransferase system, EIIB
PCBEPFIF_00741 2.56e-188 glvR - - K ko:K03481 - ko00000,ko03000 Helix-turn-helix domain, rpiR family
PCBEPFIF_00742 1.52e-103 - - - - - - - -
PCBEPFIF_00743 1.96e-113 ptbA 2.7.1.208 - G ko:K02755,ko:K02777,ko:K20107,ko:K20108 ko00010,ko00500,ko00520,ko02026,ko02060,ko05111,map00010,map00500,map00520,map02026,map02060,map05111 ko00000,ko00001,ko00002,ko01000,ko02000 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
PCBEPFIF_00744 1.76e-52 - - - - - - - -
PCBEPFIF_00745 7.48e-155 - - - C - - - nitroreductase
PCBEPFIF_00746 0.0 yhdP - - S - - - Transporter associated domain
PCBEPFIF_00747 1.43e-131 hpt 2.4.2.8 - F ko:K00760 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 ko00000,ko00001,ko01000 Belongs to the purine pyrimidine phosphoribosyltransferase family
PCBEPFIF_00748 0.0 - - - L - - - Transposase DDE domain
PCBEPFIF_00749 1.35e-301 lacS - - G ko:K11104,ko:K16209 - ko00000,ko02000 Transporter
PCBEPFIF_00750 4.5e-235 lacR - - K ko:K02529 - ko00000,ko03000 Transcriptional regulator
PCBEPFIF_00751 0.0 lacL 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 2 family
PCBEPFIF_00752 6.17e-237 lacM 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 beta-galactosidase
PCBEPFIF_00753 6.98e-241 galE 5.1.3.2 - M ko:K01784 ko00052,ko00520,ko01100,map00052,map00520,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the NAD(P)-dependent epimerase dehydratase family
PCBEPFIF_00754 1.19e-143 - - - S - - - Nucleotidyl transferase AbiEii toxin, Type IV TA system
PCBEPFIF_00755 8.18e-304 - - - G ko:K02027 - ko00000,ko00002,ko02000 Bacterial extracellular solute-binding protein
PCBEPFIF_00757 0.0 treC 3.2.1.93 GH13 G ko:K01226 ko00500,map00500 ko00000,ko00001,ko01000 Alpha amylase, catalytic domain protein
PCBEPFIF_00758 2.09e-129 treR - - K ko:K03486 - ko00000,ko03000 UTRA
PCBEPFIF_00759 0.0 treB - - G ko:K02755,ko:K02756,ko:K02757 ko02060,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 phosphotransferase system
PCBEPFIF_00760 1.12e-85 spxA - - K ko:K16509 - ko00000 Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
PCBEPFIF_00761 6.84e-243 - - - L ko:K07478 - ko00000 AAA C-terminal domain
PCBEPFIF_00762 0.0 yqjE 3.4.11.14, 3.4.11.4 - E ko:K01258,ko:K01263 - ko00000,ko01000,ko01002 Cleaves the N-terminal amino acid of tripeptides
PCBEPFIF_00763 3.45e-109 - - - K - - - Acetyltransferase (GNAT) domain
PCBEPFIF_00764 2.98e-289 - - - S - - - Putative peptidoglycan binding domain
PCBEPFIF_00765 7.89e-124 - - - S - - - ECF-type riboflavin transporter, S component
PCBEPFIF_00766 3.96e-130 pdxK 2.7.1.35 - H ko:K00868 ko00750,ko01100,map00750,map01100 ko00000,ko00001,ko01000 Phosphomethylpyrimidine kinase
PCBEPFIF_00767 9.19e-259 pbpX1 - - V - - - Beta-lactamase
PCBEPFIF_00768 6.47e-149 maa3 2.3.1.79 - S ko:K00661 - ko00000,ko01000 transferase hexapeptide repeat
PCBEPFIF_00769 1.31e-103 yvbK - - K - - - COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PCBEPFIF_00770 7.49e-144 - - - - - - - -
PCBEPFIF_00771 1.74e-171 - - - K - - - Helix-turn-helix XRE-family like proteins
PCBEPFIF_00772 1.27e-182 - - - - - - - -
PCBEPFIF_00773 9.9e-231 - 3.6.4.12 - K ko:K03655 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Putative ATP-dependent DNA helicase recG C-terminal
PCBEPFIF_00774 4.23e-153 rsuA 5.4.99.19 - J ko:K06183 - ko00000,ko01000,ko03009 Belongs to the pseudouridine synthase RsuA family
PCBEPFIF_00775 2.4e-35 - - - S - - - PD-(D/E)XK nuclease family transposase
PCBEPFIF_00776 3.69e-87 - - - S - - - GtrA-like protein
PCBEPFIF_00777 2.11e-220 yfdH - GT2 M ko:K12999 - ko00000,ko01000,ko01003,ko01005 Glycosyltransferase, group 2 family protein
PCBEPFIF_00778 3.33e-123 - - - S - - - Protein of unknown function (DUF3990)
PCBEPFIF_00779 2.09e-59 - - - - - - - -
PCBEPFIF_00780 2.8e-05 - - - S - - - PD-(D/E)XK nuclease family transposase
PCBEPFIF_00781 0.0 yoaB 3.6.3.8 - P ko:K01537 - ko00000,ko01000 P-type ATPase
PCBEPFIF_00782 5.58e-169 - - - S ko:K06926 - ko00000 AAA domain, putative AbiEii toxin, Type IV TA system
PCBEPFIF_00783 1.68e-66 - - - - - - - -
PCBEPFIF_00784 0.0 valS 6.1.1.9 - J ko:K01873 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
PCBEPFIF_00785 1.73e-306 folC 6.3.2.12, 6.3.2.17 - H ko:K11754 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the folylpolyglutamate synthase family
PCBEPFIF_00786 3.7e-163 - - - S - - - Haloacid dehalogenase-like hydrolase
PCBEPFIF_00787 8.7e-141 radC - - L ko:K03630 - ko00000 DNA repair protein
PCBEPFIF_00788 5.81e-226 mreB - - D ko:K03569 - ko00000,ko02048,ko03036,ko04812 cell shape determining protein MreB
PCBEPFIF_00789 2.88e-189 mreC - - M ko:K03570 - ko00000,ko03036 Involved in formation and maintenance of cell shape
PCBEPFIF_00790 6.34e-121 mreD - - - ko:K03571 - ko00000,ko03036 -
PCBEPFIF_00791 1.4e-09 - - - S - - - Protein of unknown function (DUF4044)
PCBEPFIF_00792 1.02e-72 - - - S - - - Protein of unknown function (DUF3397)
PCBEPFIF_00793 5.63e-102 mraZ - - K ko:K03925 - ko00000 Belongs to the MraZ family
PCBEPFIF_00794 1.28e-224 rsmH 2.1.1.199 - J ko:K03438 - ko00000,ko01000,ko03009 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
PCBEPFIF_00795 9.31e-72 ftsL - - D - - - Cell division protein FtsL
PCBEPFIF_00796 0.0 pbpX - - M ko:K08724,ko:K12552,ko:K12556 ko00550,ko01100,ko01501,map00550,map01100,map01501 ko00000,ko00001,ko01000,ko01011 Penicillin-binding Protein
PCBEPFIF_00797 4.43e-224 mraY 2.7.8.13 - M ko:K01000 ko00550,ko01100,ko01502,map00550,map01100,map01502 ko00000,ko00001,ko01000,ko01011 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
PCBEPFIF_00798 0.0 murD 6.3.2.9 - M ko:K01925 ko00471,ko00550,ko01100,map00471,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
PCBEPFIF_00799 1.16e-265 murG 2.4.1.227 GT28 M ko:K02563 ko00550,ko01100,ko01502,ko04112,map00550,map01100,map01502,map04112 ko00000,ko00001,ko01000,ko01011 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
PCBEPFIF_00800 7.72e-195 divIB - - D ko:K03589 ko04112,map04112 ko00000,ko00001,ko03036 Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
PCBEPFIF_00801 1.88e-310 ftsA - - D ko:K03590 ko04112,map04112 ko00000,ko00001,ko03036,ko04812 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
PCBEPFIF_00802 3.74e-302 ftsZ - - D ko:K03531 ko04112,map04112 ko00000,ko00001,ko02048,ko03036,ko04812 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
PCBEPFIF_00803 1.43e-96 sepF - - D ko:K09772 - ko00000,ko03036 Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
PCBEPFIF_00804 2.42e-60 yggT - - S ko:K02221 - ko00000,ko02044 YGGT family
PCBEPFIF_00805 8.08e-192 ylmH - - S - - - S4 domain protein
PCBEPFIF_00806 4.44e-138 divIVA - - D ko:K04074 - ko00000,ko03036 DivIVA domain protein
PCBEPFIF_00807 0.0 ileS 6.1.1.5 - J ko:K01870 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
PCBEPFIF_00808 2.32e-43 cspA - - K ko:K03704 - ko00000,ko03000 'Cold-shock' DNA-binding domain
PCBEPFIF_00809 1.27e-134 nudF 3.6.1.13 - L ko:K01515 ko00230,map00230 ko00000,ko00001,ko01000 ADP-ribose pyrophosphatase
PCBEPFIF_00810 1.8e-57 - - - - - - - -
PCBEPFIF_00811 2.05e-163 mtnN 3.2.2.9 - E ko:K01243 ko00270,ko01100,ko01230,map00270,map01100,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
PCBEPFIF_00812 1.62e-276 iscS 2.8.1.7 - E ko:K04487 ko00730,ko01100,ko04122,map00730,map01100,map04122 ko00000,ko00001,ko01000,ko02048,ko03016,ko03029 Aminotransferase class V
PCBEPFIF_00813 2.97e-76 XK27_04120 - - S - - - Putative amino acid metabolism
PCBEPFIF_00814 1.9e-279 mnmA 2.8.1.13 - J ko:K00566 ko04122,map04122 ko00000,ko00001,ko01000,ko03016 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
PCBEPFIF_00815 4.7e-163 pgm - - G - - - Phosphoglycerate mutase family
PCBEPFIF_00816 3.28e-148 - - - S - - - repeat protein
PCBEPFIF_00817 0.0 recD2 3.1.11.5 - L ko:K03581 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
PCBEPFIF_00818 0.0 - - - L - - - Nuclease-related domain
PCBEPFIF_00819 6.17e-154 - - - L - - - COG2826 Transposase and inactivated derivatives, IS30 family
PCBEPFIF_00820 1.85e-49 dxs 2.2.1.7 - H ko:K01662 ko00730,ko00900,ko01100,ko01110,ko01130,map00730,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
PCBEPFIF_00821 3.21e-63 dxs 2.2.1.7 - H ko:K01662 ko00730,ko00900,ko01100,ko01110,ko01130,map00730,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
PCBEPFIF_00822 1.56e-48 ydhF - - S - - - Aldo keto reductase
PCBEPFIF_00823 1.96e-51 - - - K - - - HxlR-like helix-turn-helix
PCBEPFIF_00824 6.55e-97 - - - K - - - LytTr DNA-binding domain
PCBEPFIF_00825 2.58e-98 - - - S - - - Protein of unknown function (DUF3021)
PCBEPFIF_00826 1.21e-214 - - - V ko:K01990 - ko00000,ko00002,ko02000 ABC transporter
PCBEPFIF_00827 5.55e-168 - - - S ko:K01992 - ko00000,ko00002,ko02000 domain protein
PCBEPFIF_00828 1.49e-136 - - - K - - - Acetyltransferase (GNAT) domain
PCBEPFIF_00829 1.07e-93 infC - - J ko:K02520 - ko00000,ko03012,ko03029 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
PCBEPFIF_00830 9.64e-38 rpmI - - J ko:K02916 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL35 family
PCBEPFIF_00831 8.69e-76 rplT - - J ko:K02887 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
PCBEPFIF_00832 3.21e-195 add 3.5.4.2, 3.5.4.4 - F ko:K01488,ko:K02029,ko:K21053 ko00230,ko01100,ko05340,map00230,map01100,map05340 ko00000,ko00001,ko00002,ko01000,ko02000 Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
PCBEPFIF_00833 3.01e-255 tnpB - - L ko:K07496 - ko00000 Putative transposase DNA-binding domain
PCBEPFIF_00834 6.85e-109 yqeG - - S ko:K07015 - ko00000 HAD phosphatase, family IIIA
PCBEPFIF_00835 1.24e-256 yqeH - - S ko:K06948 - ko00000,ko03009 Ribosome biogenesis GTPase YqeH
PCBEPFIF_00836 5.93e-156 nadD 2.7.7.18 - H ko:K00969 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
PCBEPFIF_00837 1.59e-141 yqeK - - H - - - Hydrolase, HD family
PCBEPFIF_00838 5.09e-78 rsfS - - J ko:K09710 - ko00000,ko03009 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
PCBEPFIF_00839 1.39e-276 ylbM - - S - - - Belongs to the UPF0348 family
PCBEPFIF_00840 1.32e-126 ylbN - - S ko:K07040 - ko00000 Uncharacterized ACR, COG1399
PCBEPFIF_00841 3.52e-163 csrR - - K - - - response regulator
PCBEPFIF_00842 0.0 arlS 2.7.13.3 - T ko:K18940 ko02020,map02020 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Histidine kinase
PCBEPFIF_00843 1.16e-23 - - - - - - - -
PCBEPFIF_00844 1.36e-62 - - - S ko:K07052 - ko00000 CAAX protease self-immunity
PCBEPFIF_00845 1.46e-283 - - - S - - - SLAP domain
PCBEPFIF_00846 2.03e-111 - - - S ko:K19055 - ko00000,ko01000,ko03016 Aminoacyl-tRNA editing domain
PCBEPFIF_00847 1.21e-216 yidC - - U ko:K03217 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044,ko03029 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PCBEPFIF_00848 5.58e-59 acyP 3.6.1.7 - C ko:K01512 ko00620,ko00627,ko01120,map00620,map00627,map01120 ko00000,ko00001,ko01000 Belongs to the acylphosphatase family
PCBEPFIF_00849 1.49e-177 spoU - - J ko:K03437 - ko00000,ko03016 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PCBEPFIF_00850 3.71e-76 yodB - - K - - - Transcriptional regulator, HxlR family
PCBEPFIF_00852 3.26e-142 glnP9 - - P ko:K02029 - ko00000,ko00002,ko02000 ABC transporter, permease protein
PCBEPFIF_00853 5.01e-151 glnP7 - - P ko:K02029 - ko00000,ko00002,ko02000 ABC transporter permease
PCBEPFIF_00854 2.52e-83 glnQ 3.6.3.21 - E ko:K02028 - ko00000,ko00002,ko01000,ko02000 ABC transporter, ATP-binding protein
PCBEPFIF_00855 1.45e-205 uvrA2 - - L ko:K03701 ko03420,map03420 ko00000,ko00001,ko03400 excinuclease ABC, A subunit
PCBEPFIF_00856 5.26e-219 uvrA2 - - L ko:K03701 ko03420,map03420 ko00000,ko00001,ko03400 excinuclease ABC, A subunit
PCBEPFIF_00857 3.34e-109 uvrA2 - - L ko:K03701 ko03420,map03420 ko00000,ko00001,ko03400 excinuclease ABC, A subunit
PCBEPFIF_00858 9.17e-241 mmuM 2.1.1.10 - H ko:K00547 ko00270,ko01100,ko01110,map00270,map01100,map01110 ko00000,ko00001,ko01000 homocysteine S-methyltransferase
PCBEPFIF_00859 9.85e-147 - - - I - - - Acid phosphatase homologues
PCBEPFIF_00860 2.34e-284 B4168_4126 - - L ko:K07493 - ko00000 Transposase
PCBEPFIF_00861 1.88e-42 - - - K - - - Helix-turn-helix domain
PCBEPFIF_00863 6.76e-73 - - - S - - - protein encoded in hypervariable junctions of pilus gene clusters
PCBEPFIF_00864 5.99e-50 - - - S - - - HicA toxin of bacterial toxin-antitoxin,
PCBEPFIF_00865 8.69e-314 purB 4.3.2.2 - F ko:K01756 ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
PCBEPFIF_00866 0.0 purA 6.3.4.4 - F ko:K01939 ko00230,ko00250,ko01100,map00230,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
PCBEPFIF_00867 4.04e-240 guaC 1.7.1.7 - F ko:K00364 ko00230,map00230 ko00000,ko00001,ko01000 Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
PCBEPFIF_00870 1.84e-263 - 4.2.1.126 - S ko:K07106,ko:K09963 ko00520,ko01100,map00520,map01100 ko00000,ko00001,ko01000 Bacterial protein of unknown function (DUF871)
PCBEPFIF_00871 6.23e-243 asnA 6.3.1.1 - F ko:K01914 ko00250,ko00460,ko01100,ko01110,ko01230,map00250,map00460,map01100,map01110,map01230 ko00000,ko00001,ko01000 aspartate--ammonia ligase
PCBEPFIF_00872 1.76e-288 - - - E - - - amino acid
PCBEPFIF_00873 3.3e-179 puuD - - S ko:K07010 - ko00000,ko01002 peptidase C26
PCBEPFIF_00874 6.77e-222 - - - S - - - PFAM Archaeal ATPase
PCBEPFIF_00875 2.79e-309 yifK - - E ko:K03293 - ko00000 Amino acid permease
PCBEPFIF_00876 6.49e-310 aapA - - E ko:K03293,ko:K11737 - ko00000,ko02000 Amino acid permease
PCBEPFIF_00877 4.88e-147 sipS3 3.4.21.89 - U ko:K03100 ko02024,ko03060,map02024,map03060 ko00000,ko00001,ko01000,ko01002 Belongs to the peptidase S26 family
PCBEPFIF_00878 7.77e-150 - - - V - - - ABC transporter transmembrane region
PCBEPFIF_00879 9.47e-89 pre - - D - - - plasmid recombination enzyme
PCBEPFIF_00880 1.33e-120 - - - J - - - Aminoglycoside-2''-adenylyltransferase
PCBEPFIF_00881 1.42e-17 - - - - - - - -
PCBEPFIF_00882 0.0 - - - L - - - Transposase
PCBEPFIF_00883 4.09e-299 lacZ 3.2.1.23 - G ko:K12308 ko00052,map00052 ko00000,ko00001,ko01000 -beta-galactosidase
PCBEPFIF_00884 1.45e-280 galK 2.7.1.6 - F ko:K00849 ko00052,ko00520,ko01100,map00052,map00520,map01100 ko00000,ko00001,ko00002,ko01000,ko04147 Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
PCBEPFIF_00885 0.0 galT 2.7.7.12 - G ko:K00965 ko00052,ko00520,ko01100,ko04917,map00052,map00520,map01100,map04917 ko00000,ko00001,ko00002,ko01000 UDP-glucose--hexose-1-phosphate uridylyltransferase
PCBEPFIF_00886 7.63e-250 galM 5.1.3.3 - G ko:K01785 ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the interconversion of alpha and beta anomers of maltose
PCBEPFIF_00887 2.14e-48 - - - - - - - -
PCBEPFIF_00888 3.25e-224 - - - K ko:K03484 - ko00000,ko03000 Periplasmic binding protein domain
PCBEPFIF_00889 1.16e-304 msmE - - G ko:K10117 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Bacterial extracellular solute-binding protein
PCBEPFIF_00890 8.41e-202 msmF - - P ko:K10118 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
PCBEPFIF_00891 8.75e-197 - - - P ko:K10119 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
PCBEPFIF_00892 1.72e-268 msmX - - P ko:K10112 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Belongs to the ABC transporter superfamily
PCBEPFIF_00893 0.0 melA 3.2.1.22 - G ko:K07407 ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603 ko00000,ko00001,ko01000 alpha-galactosidase
PCBEPFIF_00894 0.0 gtfA 2.4.1.7 GH13 G ko:K00690 ko00500,map00500 ko00000,ko00001,ko01000 Sucrose glucosyltransferase
PCBEPFIF_00895 3.08e-147 - - - T - - - Region found in RelA / SpoT proteins
PCBEPFIF_00896 3.06e-135 dltr - - K - - - response regulator
PCBEPFIF_00897 8.76e-299 sptS - - T - - - Histidine kinase
PCBEPFIF_00898 5.78e-268 - - - EGP - - - Major Facilitator Superfamily
PCBEPFIF_00899 2.75e-91 - - - O - - - OsmC-like protein
PCBEPFIF_00900 4.05e-124 yhaH - - S - - - Protein of unknown function (DUF805)
PCBEPFIF_00901 5.06e-111 - - - - - - - -
PCBEPFIF_00902 0.0 - - - - - - - -
PCBEPFIF_00903 2.71e-177 - - - S - - - Fic/DOC family
PCBEPFIF_00904 2.27e-124 - - - S - - - SLAP domain
PCBEPFIF_00905 1.2e-246 - - - S - - - SLAP domain
PCBEPFIF_00906 5.19e-90 potE - - E - - - Amino Acid
PCBEPFIF_00907 1.38e-251 potE - - E - - - Amino Acid
PCBEPFIF_00908 3.32e-283 ackA 2.7.2.1 - F ko:K00925 ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PCBEPFIF_00909 2.12e-311 lctO 1.13.12.4 - C ko:K00467,ko:K10530 ko00620,map00620 ko00000,ko00001,ko01000 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases
PCBEPFIF_00910 1.39e-63 dapE 3.5.1.18 - E ko:K01439 ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230 ko00000,ko00001,ko00002,ko01000 succinyl-diaminopimelate desuccinylase
PCBEPFIF_00911 6.36e-153 dapE 3.5.1.18 - E ko:K01439 ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230 ko00000,ko00001,ko00002,ko01000 succinyl-diaminopimelate desuccinylase
PCBEPFIF_00912 1.6e-69 yitW - - S - - - Iron-sulfur cluster assembly protein
PCBEPFIF_00913 3.15e-198 sdaAA 4.3.1.17 - E ko:K01752 ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230 ko00000,ko00001,ko01000 L-serine dehydratase, iron-sulfur-dependent, alpha subunit
PCBEPFIF_00914 4.39e-289 B4168_4126 - - L ko:K07493 - ko00000 Transposase
PCBEPFIF_00915 3.07e-149 - 4.3.1.17 - E ko:K01752 ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230 ko00000,ko00001,ko01000 Serine dehydratase beta chain
PCBEPFIF_00916 2.27e-59 - - - - - - - -
PCBEPFIF_00917 0.0 yjcA - - S ko:K19350 ko02010,map02010 ko00000,ko00001,ko01504,ko02000 ABC transporter
PCBEPFIF_00918 2.41e-51 eriC - - P ko:K03281 - ko00000 chloride
PCBEPFIF_00920 2.73e-154 pyrE 2.4.2.10 - F ko:K00762 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
PCBEPFIF_00921 1.56e-164 pyrF 4.1.1.23 - F ko:K01591 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
PCBEPFIF_00922 2.64e-213 pyrD 1.3.1.14, 1.3.98.1 - F ko:K00226,ko:K17828 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
PCBEPFIF_00923 7.13e-123 pyrR 2.4.2.9 - F ko:K02825 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko01000,ko03000 Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
PCBEPFIF_00924 2.22e-231 pyrB 2.1.3.2 - F ko:K00609 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the ATCase OTCase family
PCBEPFIF_00925 2.04e-313 pyrC 3.5.2.3 - F ko:K01465 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
PCBEPFIF_00926 4.22e-269 carA 6.3.5.5 - F ko:K01956 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Carbamoyl-phosphate synthetase glutamine chain
PCBEPFIF_00927 0.0 carB 6.3.5.5 - F ko:K01955 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Carbamoyl-phosphate synthase
PCBEPFIF_00928 0.0 lctP - - C ko:K03303 - ko00000,ko02000 L-lactate permease
PCBEPFIF_00929 2.89e-191 - - - U ko:K05340 - ko00000,ko02000 sugar transport
PCBEPFIF_00930 3.57e-61 - - - - - - - -
PCBEPFIF_00931 2.88e-105 msrB 1.8.4.12 - O ko:K07305 - ko00000,ko01000 peptide methionine sulfoxide reductase
PCBEPFIF_00932 0.0 pepX 3.4.14.11 - E ko:K01281 - ko00000,ko01000,ko01002 Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
PCBEPFIF_00933 1.18e-26 - - - - - - - -
PCBEPFIF_00934 1.79e-245 - - - S - - - Bacteriocin helveticin-J
PCBEPFIF_00935 0.0 - - - M - - - Peptidase family M1 domain
PCBEPFIF_00936 3.23e-223 - - - S - - - SLAP domain
PCBEPFIF_00937 1.64e-299 mepA - - V ko:K18908 - ko00000,ko00002,ko01504,ko02000 MATE efflux family protein
PCBEPFIF_00938 1.29e-313 murC 6.3.2.8 - M ko:K01924 ko00471,ko00550,ko01100,map00471,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Belongs to the MurCDEF family
PCBEPFIF_00939 8.78e-157 XK27_10290 - - J ko:K06878 - ko00000 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PCBEPFIF_00940 1.35e-71 ytpP - - CO - - - Thioredoxin
PCBEPFIF_00942 2.16e-163 trmB 2.1.1.33 - J ko:K03439 - ko00000,ko01000,ko03016 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
PCBEPFIF_00943 4.02e-282 ecsB - - U ko:K01992 - ko00000,ko00002,ko02000 ABC transporter
PCBEPFIF_00944 3.67e-174 ecsA - - V ko:K01990 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
PCBEPFIF_00945 7.99e-102 hit - - FG ko:K02503 - ko00000,ko04147 Scavenger mRNA decapping enzyme C-term binding
PCBEPFIF_00946 1.2e-41 - - - - - - - -
PCBEPFIF_00947 1.09e-196 prsA 5.2.1.8 - M ko:K07533 - ko00000,ko01000,ko03110 Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
PCBEPFIF_00948 2.71e-91 eda 4.1.2.14, 4.1.3.42 - G ko:K01625 ko00030,ko00630,ko01100,ko01120,ko01200,map00030,map00630,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 KDPG and KHG aldolase
PCBEPFIF_00949 5.49e-197 - - - L - - - Phage integrase, N-terminal SAM-like domain
PCBEPFIF_00950 1.26e-120 - - - M - - - LysM domain protein
PCBEPFIF_00951 6.38e-59 - - - S - - - aldo-keto reductase (NADP) activity
PCBEPFIF_00952 2.92e-98 - - - C - - - Aldo keto reductase
PCBEPFIF_00953 9.4e-232 lacX 5.1.3.3 - G ko:K01785 ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130 ko00000,ko00001,ko00002,ko01000 Aldose 1-epimerase
PCBEPFIF_00954 1.13e-290 - - - L - - - COG3547 Transposase and inactivated derivatives
PCBEPFIF_00955 1.4e-313 hslU - - O ko:K03667 - ko00000,ko03110 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
PCBEPFIF_00956 4.67e-116 hslV 3.4.25.2 - O ko:K01419 - ko00000,ko01000,ko01002 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
PCBEPFIF_00957 7.31e-181 xerC - - D ko:K03733,ko:K04763 - ko00000,ko03036 Phage integrase, N-terminal SAM-like domain
PCBEPFIF_00958 1.42e-315 trmFO 2.1.1.74 - J ko:K04094 - ko00000,ko01000,ko03016,ko03036 Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
PCBEPFIF_00959 0.0 topA 5.99.1.2 - L ko:K03168 - ko00000,ko01000,ko03032,ko03400 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
PCBEPFIF_00960 2.14e-195 dprA - - LU ko:K04096 - ko00000 DNA protecting protein DprA
PCBEPFIF_00961 5.8e-168 rnhB 3.1.26.4 - L ko:K03470 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PCBEPFIF_00962 1.3e-199 rbgA - - S ko:K14540 - ko00000,ko03009 Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
PCBEPFIF_00963 1.12e-218 nhaP4 - - P ko:K03316 - ko00000 Sodium proton antiporter
PCBEPFIF_00964 5.55e-51 - - - P - - - NhaP-type Na H and K H
PCBEPFIF_00965 9.85e-49 yozE - - S - - - Belongs to the UPF0346 family
PCBEPFIF_00966 8.63e-191 degV3 - - S - - - Uncharacterised protein, DegV family COG1307
PCBEPFIF_00967 1.8e-143 hlyIII - - S ko:K11068 - ko00000,ko02042 protein, hemolysin III
PCBEPFIF_00968 8.5e-286 cca 2.7.7.72 - J ko:K00974 ko03013,map03013 ko00000,ko00001,ko01000,ko03016 Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
PCBEPFIF_00969 5.48e-204 XK27_10395 - - S - - - Uncharacterised 5xTM membrane BCR, YitT family COG1284
PCBEPFIF_00970 1.65e-112 - 3.4.21.96 - S ko:K01361 - ko00000,ko01000,ko01002,ko03110 SLAP domain
PCBEPFIF_00971 1.27e-109 yagE - - E - - - Amino acid permease
PCBEPFIF_00972 3.91e-105 - - - E - - - amino acid
PCBEPFIF_00973 5.09e-192 - 2.3.1.81 - V ko:K00662 - ko00000,ko01000,ko01504 Aminoglycoside 3-N-acetyltransferase
PCBEPFIF_00974 1.2e-187 - - - F - - - Phosphorylase superfamily
PCBEPFIF_00975 3.56e-184 - - - F - - - Phosphorylase superfamily
PCBEPFIF_00976 3.85e-105 - - - S - - - AAA domain
PCBEPFIF_00977 1.36e-155 - - - S - - - F420-0:Gamma-glutamyl ligase
PCBEPFIF_00978 9.8e-95 yxaM - - EGP - - - Major facilitator Superfamily
PCBEPFIF_00979 7.2e-67 yxaM - - EGP - - - Major facilitator Superfamily
PCBEPFIF_00980 1.48e-143 yjhB 3.6.1.13 - F ko:K01515 ko00230,map00230 ko00000,ko00001,ko01000 NUDIX domain
PCBEPFIF_00981 5.94e-123 rimL - - J ko:K03817 - ko00000,ko01000,ko03009 Acetyltransferase (GNAT) domain
PCBEPFIF_00982 0.0 guaA 6.3.5.2 - F ko:K01951 ko00230,ko00983,ko01100,map00230,map00983,map01100 ko00000,ko00001,ko00002,ko01000,ko01002 Catalyzes the synthesis of GMP from XMP
PCBEPFIF_00983 4.41e-11 - - - K - - - Helix-turn-helix
PCBEPFIF_00984 2.16e-198 msmR - - K - - - AraC-like ligand binding domain
PCBEPFIF_00985 0.0 pepDA - - E ko:K08659 - ko00000,ko01000,ko01002 Dipeptidase
PCBEPFIF_00986 1.63e-111 - - - K - - - acetyltransferase
PCBEPFIF_00987 1.89e-312 murA 2.5.1.7 - M ko:K00790 ko00520,ko00550,ko01100,map00520,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PCBEPFIF_00988 0.0 pyrG 6.3.4.2 - F ko:K01937 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
PCBEPFIF_00989 2.42e-96 rpoE - - K ko:K03048 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 br01611,ko00000,ko00001,ko00002,ko03021,ko03400 Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
PCBEPFIF_00990 1.01e-88 - - - S - - - Domain of unknown function (DUF1934)
PCBEPFIF_00991 0.0 - - - S ko:K06885 - ko00000 Metal dependent phosphohydrolases with conserved 'HD' motif.
PCBEPFIF_00992 1.41e-48 - - - - - - - -
PCBEPFIF_00993 1.76e-206 - - - GK - - - ROK family
PCBEPFIF_00994 5.4e-226 prs 2.7.6.1 - F ko:K00948 ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PCBEPFIF_00995 0.0 - - - S - - - SLAP domain
PCBEPFIF_00996 5.52e-113 - - - - - - - -
PCBEPFIF_00997 7.68e-309 glmU 2.3.1.157, 2.7.7.23 - M ko:K04042 ko00520,ko01100,ko01130,map00520,map01100,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
PCBEPFIF_00998 1.75e-191 purR - - F ko:K09685 - ko00000,ko03000 pur operon repressor
PCBEPFIF_00999 1.72e-53 veg - - S - - - Biofilm formation stimulator VEG
PCBEPFIF_01000 4.7e-205 ksgA 2.1.1.182 - J ko:K02528 - ko00000,ko01000,ko03009 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
PCBEPFIF_01001 5.17e-129 rnmV 3.1.26.8 - J ko:K05985 - ko00000,ko01000 Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
PCBEPFIF_01002 2.61e-187 tatD - - L ko:K03424 - ko00000,ko01000 hydrolase, TatD family
PCBEPFIF_01003 0.0 metG 6.1.1.10 - J ko:K01874 ko00450,ko00970,map00450,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
PCBEPFIF_01004 0.0 mgtA 3.6.3.2 - P ko:K01531 - ko00000,ko01000 COG0474 Cation transport ATPase
PCBEPFIF_01005 5.34e-134 - - - S ko:K06872 - ko00000 TPM domain
PCBEPFIF_01006 4.29e-116 comEB 3.5.4.12 - F ko:K01493 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000,ko02044 MafB19-like deaminase
PCBEPFIF_01007 6.74e-244 trpS 6.1.1.2 - J ko:K01867 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the class-I aminoacyl-tRNA synthetase family
PCBEPFIF_01008 7.04e-145 - - - E - - - Belongs to the SOS response-associated peptidase family
PCBEPFIF_01010 2.37e-143 - - - - - - - -
PCBEPFIF_01011 5.69e-100 greA - - K ko:K03624 - ko00000,ko03021 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PCBEPFIF_01012 2.05e-94 hsp - - O ko:K13993 ko04141,map04141 ko00000,ko00001,ko03110 Belongs to the small heat shock protein (HSP20) family
PCBEPFIF_01013 0.0 pepE 3.4.22.40 - E ko:K01372 - ko00000,ko01000,ko01002 aminopeptidase
PCBEPFIF_01014 6.54e-222 oppF - - P ko:K10823 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 Belongs to the ABC transporter superfamily
PCBEPFIF_01015 6.08e-253 oppD - - P ko:K02031,ko:K15583 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 Belongs to the ABC transporter superfamily
PCBEPFIF_01016 2.73e-240 oppC - - EP ko:K15582 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC-type dipeptide oligopeptide nickel transport systems, permease components
PCBEPFIF_01017 1.91e-191 oppB - - P ko:K15581 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC-type dipeptide oligopeptide nickel transport systems, permease components
PCBEPFIF_01018 4.39e-267 guaB 1.1.1.205 - F ko:K00088 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko04147 Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
PCBEPFIF_01019 0.0 oppA - - E ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter, substratebinding protein
PCBEPFIF_01020 3.19e-11 oppA - - E ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter, substratebinding protein
PCBEPFIF_01021 1.07e-158 ypgQ - - S ko:K06950 - ko00000 Metal dependent phosphohydrolases with conserved 'HD' motif.
PCBEPFIF_01022 0.0 pepC2 3.4.22.40 - E ko:K01372 - ko00000,ko01000,ko01002 aminopeptidase
PCBEPFIF_01024 8.04e-72 - - - - - - - -
PCBEPFIF_01025 2.98e-308 tyrS 6.1.1.1 - J ko:K01866 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
PCBEPFIF_01026 0.0 - - - S - - - Fibronectin type III domain
PCBEPFIF_01027 1.62e-26 - - - - ko:K07473 - ko00000,ko02048 -
PCBEPFIF_01028 0.0 XK27_08315 - - M - - - Sulfatase
PCBEPFIF_01029 1.78e-146 plsY1 2.3.1.15 - I ko:K08591 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko01004 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
PCBEPFIF_01030 2.06e-258 brpA - - K - - - Cell envelope-like function transcriptional attenuator common domain protein
PCBEPFIF_01031 1.81e-128 - - - G - - - Aldose 1-epimerase
PCBEPFIF_01032 4.51e-171 gpmA 5.4.2.11 - G ko:K01834 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PCBEPFIF_01033 2.48e-174 - - - - - - - -
PCBEPFIF_01034 6.74e-176 - - - - - - - -
PCBEPFIF_01035 3.17e-212 - - - S - - - Oxidoreductase family, NAD-binding Rossmann fold
PCBEPFIF_01036 6.39e-150 pcp 3.4.19.3 - O ko:K01304 - ko00000,ko01000,ko01002 Removes 5-oxoproline from various penultimate amino acid residues except L-proline
PCBEPFIF_01037 0.0 yjbQ - - P ko:K03455,ko:K03499 - ko00000,ko02000 TrkA C-terminal domain protein
PCBEPFIF_01038 1.33e-252 - 3.2.1.96, 3.5.1.28 GH73 M ko:K01227,ko:K01447,ko:K13714,ko:K13731 ko00511,ko05100,map00511,map05100 ko00000,ko00001,ko01000 N-acetylmuramoyl-L-alanine amidase
PCBEPFIF_01039 1.92e-282 - - - NU - - - Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
PCBEPFIF_01040 2.66e-57 - - - L - - - transposase activity
PCBEPFIF_01041 3.79e-129 cadD - - P - - - Cadmium resistance transporter
PCBEPFIF_01043 0.0 copB 3.6.3.3, 3.6.3.4, 3.6.3.5, 3.6.3.54 - P ko:K01533,ko:K01534,ko:K17686 ko01524,ko04016,map01524,map04016 ko00000,ko00001,ko01000 P-type ATPase
PCBEPFIF_01044 3.01e-97 atkY - - K ko:K02171 ko01501,map01501 ko00000,ko00001,ko00002,ko01504,ko03000 Copper transport repressor CopY TcrY
PCBEPFIF_01046 2.1e-103 - - - L ko:K07496 - ko00000 transposase, IS605 OrfB family
PCBEPFIF_01047 7.87e-174 - - - S - - - SLAP domain
PCBEPFIF_01048 2.53e-106 - - - C - - - Flavodoxin
PCBEPFIF_01049 0.0 recQ 3.6.4.12 - L ko:K03654 ko03018,map03018 ko00000,ko00001,ko01000,ko03400 ATP-dependent DNA helicase RecQ
PCBEPFIF_01050 3e-312 ynbB - - P - - - aluminum resistance
PCBEPFIF_01051 0.0 speA 4.1.1.17, 4.1.1.18, 4.1.1.19 - E ko:K01581,ko:K01582,ko:K01585 ko00310,ko00330,ko00480,ko00960,ko01100,ko01110,ko01130,map00310,map00330,map00480,map00960,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Orn/Lys/Arg decarboxylase, C-terminal domain
PCBEPFIF_01052 0.0 - - - E - - - Amino acid permease
PCBEPFIF_01053 9.58e-122 - - - C - - - Pyridoxamine 5'-phosphate oxidase
PCBEPFIF_01054 0.0 pepV 3.5.1.18 - E ko:K01270,ko:K01274,ko:K01439 ko00300,ko00480,ko01100,ko01120,ko01230,map00300,map00480,map01100,map01120,map01230 ko00000,ko00001,ko00002,ko01000,ko01002 dipeptidase PepV
PCBEPFIF_01055 1.85e-146 ybgF - - E ko:K02205,ko:K03293,ko:K16235,ko:K16236 - ko00000,ko02000 amino acid
PCBEPFIF_01056 4.91e-17 mmuM 2.1.1.10 - H ko:K00547 ko00270,ko01100,ko01110,map00270,map01100,map01110 ko00000,ko00001,ko01000 homocysteine S-methyltransferase
PCBEPFIF_01057 5.09e-85 crcB - - U ko:K06199 - ko00000,ko02000 Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PCBEPFIF_01058 9.28e-89 crcB1 - - U ko:K06199 - ko00000,ko02000 Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PCBEPFIF_01060 2.04e-68 - - - L - - - Transposase
PCBEPFIF_01061 4.78e-42 - - - - - - - -
PCBEPFIF_01062 5.93e-60 XK27_09445 - - S - - - Domain of unknown function (DUF1827)
PCBEPFIF_01063 0.0 clpE - - O ko:K03697 - ko00000,ko03110 Belongs to the ClpA ClpB family
PCBEPFIF_01064 2.6e-37 - - - - - - - -
PCBEPFIF_01065 1.29e-54 ptsH - - G ko:K11189 - ko00000,ko02000 phosphocarrier protein HPR
PCBEPFIF_01066 0.0 ptsI 2.7.3.9 - G ko:K08483 ko02060,map02060 ko00000,ko00001,ko01000,ko02000 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
PCBEPFIF_01068 6.28e-87 spxA - - K ko:K16509 - ko00000 Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
PCBEPFIF_01069 5.03e-177 mecA - - NOT ko:K16511 - ko00000 Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
PCBEPFIF_01070 1.36e-207 coiA - - S ko:K06198 - ko00000 Competence protein
PCBEPFIF_01071 1.41e-148 yjbH - - Q - - - Thioredoxin
PCBEPFIF_01072 1.03e-144 - - - S - - - CYTH
PCBEPFIF_01073 1.7e-147 yjbM 2.7.6.5 - S ko:K07816 ko00230,map00230 ko00000,ko00001,ko01000 RelA SpoT domain protein
PCBEPFIF_01074 1.91e-195 nadK 2.7.1.23 - F ko:K00858 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko01000 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
PCBEPFIF_01075 9.29e-220 rluD2 5.4.99.23 - J ko:K06180 - ko00000,ko01000,ko03009 Responsible for synthesis of pseudouridine from uracil
PCBEPFIF_01076 0.0 mycA 4.2.1.53 - S ko:K10254 - ko00000,ko01000 Myosin-crossreactive antigen
PCBEPFIF_01077 2.66e-122 - - - S - - - SNARE associated Golgi protein
PCBEPFIF_01078 3.61e-61 - - - - ko:K07473 - ko00000,ko02048 -
PCBEPFIF_01079 2.6e-81 - - - S ko:K19157 - ko00000,ko01000,ko02048 Bacterial toxin of type II toxin-antitoxin system, YafQ
PCBEPFIF_01080 0.0 - - - S ko:K06921 - ko00000 Archaea bacterial proteins of unknown function
PCBEPFIF_01082 4.83e-117 ntd 2.4.2.6 - F ko:K08728 ko00240,map00240 ko00000,ko00001,ko01000 Nucleoside
PCBEPFIF_01083 1.37e-115 - 2.7.1.200, 2.7.1.204 - G ko:K02773,ko:K20112 ko00052,ko01100,ko02060,map00052,map01100,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PCBEPFIF_01084 1.45e-190 - 3.1.3.48 - T ko:K01104 - ko00000,ko01000 Tyrosine phosphatase family
PCBEPFIF_01085 9.29e-111 usp5 - - T - - - universal stress protein
PCBEPFIF_01086 4.65e-206 phnD - - P ko:K02044 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Phosphonate ABC transporter
PCBEPFIF_01087 1.67e-175 phnC 3.6.3.28 - P ko:K02041 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
PCBEPFIF_01088 5.6e-162 phnB - - P ko:K02042 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
PCBEPFIF_01089 1.83e-190 - - - P ko:K02042 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
PCBEPFIF_01090 6.82e-139 tag 3.2.2.20 - L ko:K01246 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 glycosylase
PCBEPFIF_01091 1.05e-108 - - - - - - - -
PCBEPFIF_01092 0.0 - - - S - - - Calcineurin-like phosphoesterase
PCBEPFIF_01093 0.0 asnB 6.3.5.4 - E ko:K01953 ko00250,ko01100,ko01110,map00250,map01100,map01110 ko00000,ko00001,ko01000,ko01002 Asparagine synthase
PCBEPFIF_01094 0.0 yxbA 6.3.1.12 - S ko:K17810 - ko00000,ko01000 ATP-grasp enzyme
PCBEPFIF_01095 0.0 nrdD 1.1.98.6 - F ko:K21636 ko00230,ko00240,ko01100,map00230,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Ribonucleoside-triphosphate reductase
PCBEPFIF_01096 1.35e-180 nrdG 1.97.1.4 - O ko:K04068 - ko00000,ko01000 Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PCBEPFIF_01097 1.69e-132 yitW - - S - - - Iron-sulfur cluster assembly protein
PCBEPFIF_01098 1.49e-282 XK27_04775 - - S ko:K09155 - ko00000 PAS domain
PCBEPFIF_01099 1.98e-278 yqjV - - EGP - - - Major Facilitator Superfamily
PCBEPFIF_01100 0.0 pepO - - O ko:K07386 - ko00000,ko01000,ko01002 Peptidase family M13
PCBEPFIF_01101 0.0 kup - - P ko:K03549 - ko00000,ko02000 Transport of potassium into the cell
PCBEPFIF_01102 1.13e-97 - - - - - - - -
PCBEPFIF_01103 3.75e-48 - - - S - - - PFAM Archaeal ATPase
PCBEPFIF_01105 1.35e-77 - - - T ko:K07171 - ko00000,ko01000,ko02048 PemK-like, MazF-like toxin of type II toxin-antitoxin system
PCBEPFIF_01106 3.61e-60 - - - - - - - -
PCBEPFIF_01107 2.77e-25 - - - - - - - -
PCBEPFIF_01108 1.21e-40 - - - - - - - -
PCBEPFIF_01109 2.77e-52 - - - S - - - Protein of unknown function (DUF2922)
PCBEPFIF_01110 1.4e-197 - - - S - - - SLAP domain
PCBEPFIF_01112 6.45e-248 - - - V - - - restriction
PCBEPFIF_01113 6.29e-265 - - - K - - - RNA-binding protein homologous to eukaryotic snRNP
PCBEPFIF_01114 1.92e-115 - - - S - - - Domain of unknown function (DUF1788)
PCBEPFIF_01115 1.48e-107 - - - S - - - Putative inner membrane protein (DUF1819)
PCBEPFIF_01116 2.74e-177 - - - S - - - Protein of unknown function (DUF3100)
PCBEPFIF_01117 3.99e-255 - - - S ko:K12941 - ko00000,ko01002 Peptidase dimerisation domain
PCBEPFIF_01118 1.01e-294 - - - Q - - - Imidazolonepropionase and related amidohydrolases
PCBEPFIF_01119 0.0 oppA - - E ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter
PCBEPFIF_01120 1.02e-192 - - - S - - - Sucrose-6F-phosphate phosphohydrolase
PCBEPFIF_01121 0.0 sufI - - Q - - - Multicopper oxidase
PCBEPFIF_01122 1.8e-34 - - - - - - - -
PCBEPFIF_01123 3.18e-202 metQ - - P ko:K02073 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Belongs to the nlpA lipoprotein family
PCBEPFIF_01124 8.21e-215 ldh3 1.1.1.27 - C ko:K00016 ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922 ko00000,ko00001,ko01000,ko04147 lactate/malate dehydrogenase, alpha/beta C-terminal domain
PCBEPFIF_01125 2.55e-94 greA - - K ko:K03624 - ko00000,ko03021 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PCBEPFIF_01126 0.0 pheT 6.1.1.20 - J ko:K01890 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PCBEPFIF_01127 3.39e-253 pheS 6.1.1.20 - J ko:K01889 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
PCBEPFIF_01128 2.34e-207 cjaA - - ET ko:K02030 - ko00000,ko00002,ko02000 ABC transporter substrate-binding protein
PCBEPFIF_01129 3.44e-55 glnQ 3.6.3.21 - E ko:K02028 - ko00000,ko00002,ko01000,ko02000 ABC transporter, ATP-binding protein
PCBEPFIF_01130 0.0 - - - V - - - ABC transporter transmembrane region
PCBEPFIF_01131 4.85e-190 - - - - - - - -
PCBEPFIF_01132 0.0 prfC - - J ko:K02837 - ko00000,ko03012 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
PCBEPFIF_01133 1.24e-181 hlyX - - S ko:K03699 - ko00000,ko02042 Transporter associated domain
PCBEPFIF_01134 3.85e-98 - - - - - - - -
PCBEPFIF_01135 7.1e-111 - - - - - - - -
PCBEPFIF_01136 1.38e-185 recX - - S ko:K03565 - ko00000,ko03400 Regulatory protein RecX
PCBEPFIF_01137 0.0 rumA_1 2.1.1.190, 2.1.1.35 - J ko:K00557,ko:K03215 - ko00000,ko01000,ko03009,ko03016 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PCBEPFIF_01138 1.55e-225 ybcH - - D ko:K06889 - ko00000 Alpha beta
PCBEPFIF_01139 7.74e-61 - - - - - - - -
PCBEPFIF_01140 1.24e-277 mvaS 2.3.3.10 - I ko:K01641 ko00072,ko00280,ko00650,ko00900,ko01100,ko01110,ko01130,map00072,map00280,map00650,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Hydroxymethylglutaryl-CoA synthase
PCBEPFIF_01141 1.05e-272 mvaA 1.1.1.88, 2.3.1.9 - C ko:K00054,ko:K00626 ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the HMG-CoA reductase family
PCBEPFIF_01142 1.28e-274 atoB 1.1.1.88, 2.3.1.9 - I ko:K00054,ko:K00626 ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the thiolase family
PCBEPFIF_01143 1.6e-215 galU 2.7.7.9 - M ko:K00963 ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130 ko00000,ko00001,ko00002,ko01000 UTP-glucose-1-phosphate uridylyltransferase
PCBEPFIF_01144 4.01e-208 rbn - - S ko:K07058 - ko00000 Belongs to the UPF0761 family
PCBEPFIF_01145 2.45e-211 map 3.4.11.18 - E ko:K01265 - ko00000,ko01000,ko01002 Methionine Aminopeptidase
PCBEPFIF_01146 5.14e-105 ykuP - - C ko:K03839 - ko00000 Flavodoxin
PCBEPFIF_01147 3.7e-113 gtcA1 - - S - - - Teichoic acid glycosylation protein
PCBEPFIF_01148 1.62e-278 mnaA 5.1.3.14 - G ko:K01791 ko00520,ko01100,ko05111,map00520,map01100,map05111 ko00000,ko00001,ko00002,ko01000,ko01005 Belongs to the UDP-N-acetylglucosamine 2-epimerase family
PCBEPFIF_01150 3.76e-316 chbC - - G ko:K02761 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko02000 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PCBEPFIF_01151 5.96e-283 yfmL - - L - - - DEAD DEAH box helicase
PCBEPFIF_01152 7.44e-168 lys - - M ko:K07273 - ko00000 Glycosyl hydrolases family 25
PCBEPFIF_01153 2.22e-296 - - - E ko:K03294 - ko00000 amino acid
PCBEPFIF_01154 0.0 - 1.3.5.4 - C ko:K00244 ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020 ko00000,ko00001,ko00002,ko01000 FAD binding domain
PCBEPFIF_01155 4.97e-114 - - - L - - - PFAM transposase, IS4 family protein
PCBEPFIF_01156 0.0 - 1.3.5.4 - C ko:K00244 ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020 ko00000,ko00001,ko00002,ko01000 FAD binding domain
PCBEPFIF_01157 3.81e-113 - - - S - - - Lysin motif
PCBEPFIF_01158 3.54e-94 - - - K ko:K03492 - ko00000,ko03000 UTRA domain
PCBEPFIF_01159 2.2e-196 pbg4 3.2.1.86 GT1 G ko:K01223 ko00010,ko00500,map00010,map00500 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 1 family
PCBEPFIF_01160 4.35e-104 pbg4 3.2.1.86 GT1 G ko:K01223 ko00010,ko00500,map00010,map00500 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 1 family
PCBEPFIF_01161 2.89e-116 alkD - - L - - - DNA alkylation repair enzyme
PCBEPFIF_01162 3.14e-226 iunH 3.2.2.1 - F ko:K01239 ko00230,ko00760,ko01100,map00230,map00760,map01100 ko00000,ko00001,ko01000 inosine-uridine preferring nucleoside hydrolase
PCBEPFIF_01163 9.44e-110 - - - - - - - -
PCBEPFIF_01164 3.04e-53 - - - C - - - FMN_bind
PCBEPFIF_01165 0.0 - - - I - - - Protein of unknown function (DUF2974)
PCBEPFIF_01166 1.03e-249 pbpX1 - - V - - - Beta-lactamase
PCBEPFIF_01167 2.38e-252 asd 1.2.1.11 - E ko:K00133 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
PCBEPFIF_01168 3.84e-278 aspC - - E ko:K00841 ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Aminotransferase
PCBEPFIF_01169 6.89e-185 dapB 1.17.1.8 - E ko:K00215 ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
PCBEPFIF_01170 1.28e-225 dapA 4.3.3.7 - E ko:K01714 ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
PCBEPFIF_01171 4.87e-282 hipO 3.5.1.47 - E ko:K05823 ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000,ko01002 Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
PCBEPFIF_01172 2.12e-105 dapH 2.3.1.117, 2.3.1.89 - E ko:K00674,ko:K05822 ko00300,ko01100,ko01110,ko01120,ko01230,map00300,map01100,map01110,map01120,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
PCBEPFIF_01173 4.84e-313 lysA 4.1.1.20 - E ko:K01586 ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
PCBEPFIF_01174 0.0 lysC 2.7.2.4 - E ko:K00928 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the aspartokinase family
PCBEPFIF_01175 8.59e-249 - - - L - - - Transposase and inactivated derivatives, IS30 family
PCBEPFIF_01176 3.15e-311 brnQ - - U ko:K03311 - ko00000 Component of the transport system for branched-chain amino acids
PCBEPFIF_01177 1.03e-151 yjhB 3.6.1.13 - F ko:K01515 ko00230,map00230 ko00000,ko00001,ko01000 NUDIX domain
PCBEPFIF_01178 3.93e-101 ltrA - - S - - - Bacterial low temperature requirement A protein (LtrA)
PCBEPFIF_01179 8.15e-143 ybbB - - S - - - Protein of unknown function (DUF1211)
PCBEPFIF_01180 0.0 yjcA - - S ko:K19350 ko02010,map02010 ko00000,ko00001,ko01504,ko02000 ABC transporter
PCBEPFIF_01181 7.92e-135 - - - S - - - Alpha beta hydrolase
PCBEPFIF_01182 8.76e-202 - - - K - - - Transcriptional regulator
PCBEPFIF_01183 1.04e-98 - - - K - - - LytTr DNA-binding domain
PCBEPFIF_01184 1.77e-84 - - - S - - - Protein of unknown function (DUF3021)
PCBEPFIF_01185 1.75e-185 dhrS4 1.1.1.100 - IQ ko:K00059 ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 Oxidoreductase, short chain dehydrogenase reductase family protein
PCBEPFIF_01186 4.73e-259 ribD 1.1.1.193, 3.5.4.26 - H ko:K11752 ko00740,ko01100,ko01110,ko02024,map00740,map01100,map01110,map02024 ko00000,ko00001,ko00002,ko01000 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
PCBEPFIF_01187 1.17e-99 ribE 2.5.1.9 - H ko:K00793 ko00740,ko01100,ko01110,map00740,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Riboflavin synthase
PCBEPFIF_01188 4.58e-291 ribBA 3.5.4.25, 4.1.99.12 - H ko:K14652 ko00740,ko00790,ko01100,ko01110,map00740,map00790,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate
PCBEPFIF_01189 1.15e-104 ribH 2.5.1.78 - H ko:K00794 ko00740,ko01100,ko01110,map00740,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin
PCBEPFIF_01190 1.04e-39 - 2.7.7.49 - L ko:K00986 - ko00000,ko01000 PFAM RNA-directed DNA polymerase (Reverse transcriptase)
PCBEPFIF_01191 2.68e-103 - 2.7.7.49 - L ko:K00986 - ko00000,ko01000 PFAM RNA-directed DNA polymerase (Reverse transcriptase)
PCBEPFIF_01192 2.47e-84 - - - L - - - Transposase and inactivated derivatives, IS30 family
PCBEPFIF_01193 8.8e-264 - - - G - - - Glycosyl hydrolases family 8
PCBEPFIF_01194 2.29e-315 - - - M - - - Glycosyl transferase
PCBEPFIF_01196 1.05e-191 - - - - - - - -
PCBEPFIF_01197 3.04e-96 - - - M - - - Peptidase family M1 domain
PCBEPFIF_01198 5.33e-303 mepA - - V ko:K18908 - ko00000,ko00002,ko01504,ko02000 MATE efflux family protein
PCBEPFIF_01199 2e-98 - - - K ko:K03827 - ko00000,ko01000 Acetyltransferase (GNAT) domain
PCBEPFIF_01200 6.77e-113 - - - S ko:K11621 ko02020,map02020 ko00000,ko00001 Putative adhesin
PCBEPFIF_01201 9.56e-139 - - - S ko:K07025 - ko00000 Haloacid dehalogenase-like hydrolase
PCBEPFIF_01202 2.37e-08 - 1.3.5.4 - C ko:K00244 ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020 ko00000,ko00001,ko00002,ko01000 PFAM fumarate reductase succinate dehydrogenase flavoprotein domain protein
PCBEPFIF_01203 1.95e-20 - 2.3.1.128 - K ko:K03790 - ko00000,ko01000,ko03009 Acetyltransferase (GNAT) domain
PCBEPFIF_01204 9.82e-111 dps - - P ko:K04047 - ko00000,ko03036 Belongs to the Dps family
PCBEPFIF_01205 1.48e-228 - - - S - - - Conserved hypothetical protein 698
PCBEPFIF_01207 3.61e-245 cbh 3.5.1.24 - M ko:K01442 ko00120,ko00121,ko01100,map00120,map00121,map01100 ko00000,ko00001,ko01000 Linear amide C-N hydrolase, choloylglycine hydrolase family protein
PCBEPFIF_01208 8.23e-132 - - - I - - - PAP2 superfamily
PCBEPFIF_01209 1.28e-189 - - - S - - - Uncharacterised protein, DegV family COG1307
PCBEPFIF_01210 3.52e-311 eno 4.2.1.11 - G ko:K01689 ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066 ko00000,ko00001,ko00002,ko01000,ko03019,ko04147 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
PCBEPFIF_01211 2.58e-124 - - - S - - - Domain of unknown function (DUF4767)
PCBEPFIF_01212 1.14e-82 yfhC - - C - - - nitroreductase
PCBEPFIF_01213 4.27e-175 ypbG 2.7.1.2 - GK ko:K00845 ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 ROK family
PCBEPFIF_01214 0.0 pbg6 3.2.1.86 GT1 G ko:K01223 ko00010,ko00500,map00010,map00500 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 1 family
PCBEPFIF_01215 7.71e-38 pts23C - - G ko:K02761 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko02000 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PCBEPFIF_01216 7.5e-253 pts23C - - G ko:K02761 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko02000 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PCBEPFIF_01217 7.23e-55 - - - - - - - -
PCBEPFIF_01218 4.15e-172 - - - K ko:K03492 - ko00000,ko03000 UTRA
PCBEPFIF_01219 0.0 - 3.2.1.86 GT1 G ko:K01223 ko00010,ko00500,map00010,map00500 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 1 family
PCBEPFIF_01220 4.04e-94 - - - S - - - Domain of unknown function (DUF3284)
PCBEPFIF_01221 7.88e-79 celC 2.7.1.196, 2.7.1.205 - G ko:K02759 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system, Lactose Cellobiose specific IIA subunit
PCBEPFIF_01222 1.32e-74 pts20B 2.7.1.196, 2.7.1.205 - G ko:K02760 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system, Lactose/Cellobiose specific IIB subunit
PCBEPFIF_01223 1.76e-76 - - - L ko:K07497 - ko00000 COG2963 Transposase and inactivated derivatives
PCBEPFIF_01224 0.0 bgl 3.2.1.21, 3.2.1.86 GT1 G ko:K01223,ko:K05350 ko00010,ko00460,ko00500,ko00940,ko01100,ko01110,map00010,map00460,map00500,map00940,map01100,map01110 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 1 family
PCBEPFIF_01225 4.12e-59 repA - - S - - - Replication initiator protein A
PCBEPFIF_01226 1.52e-48 - - - - - - - -
PCBEPFIF_01227 4.25e-06 - - - - - - - -
PCBEPFIF_01228 2.5e-32 - - - - - - - -
PCBEPFIF_01229 0.0 - - - S - - - Uncharacterised protein family (UPF0236)
PCBEPFIF_01232 3.73e-54 - - - - - - - -
PCBEPFIF_01233 7.24e-212 - - - EG - - - EamA-like transporter family
PCBEPFIF_01234 2e-212 - - - EG - - - EamA-like transporter family
PCBEPFIF_01235 6.1e-151 yicL - - EG - - - EamA-like transporter family
PCBEPFIF_01236 4.61e-138 - - - - - - - -
PCBEPFIF_01237 2.78e-116 - - - - - - - -
PCBEPFIF_01238 1.07e-237 - - - S - - - DUF218 domain
PCBEPFIF_01239 0.0 yheS_2 - - S ko:K18231,ko:K19349 ko02010,map02010 br01600,ko00000,ko00001,ko01504,ko02000 ATPases associated with a variety of cellular activities
PCBEPFIF_01240 1e-224 ABC-SBP - - S ko:K01989 - ko00000,ko00002,ko02000 ABC transporter
PCBEPFIF_01241 5.54e-167 XK27_08840 - - U ko:K05832 - ko00000,ko00002,ko02000 Belongs to the binding-protein-dependent transport system permease family
PCBEPFIF_01242 6.09e-176 XK27_08845 - - S ko:K05833 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
PCBEPFIF_01243 6.04e-60 - - - - - - - -
PCBEPFIF_01244 5.26e-17 - - - S - - - SLAP domain
PCBEPFIF_01245 1.4e-45 - - - S - - - Bacteriocin helveticin-J
PCBEPFIF_01246 9.86e-55 - - - - - - - -
PCBEPFIF_01247 2.48e-54 - - - K - - - Helix-turn-helix XRE-family like proteins
PCBEPFIF_01248 1.45e-104 - - - E - - - Zn peptidase
PCBEPFIF_01249 1.59e-315 - - - G ko:K16211 - ko00000,ko02000 Major Facilitator
PCBEPFIF_01250 1.73e-24 - - - - - - - -
PCBEPFIF_01251 1.67e-135 - - - E - - - GDSL-like Lipase/Acylhydrolase
PCBEPFIF_01252 4.4e-226 ydbI - - K - - - AI-2E family transporter
PCBEPFIF_01253 0.0 oppA - - E ko:K02035 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter substrate-binding protein
PCBEPFIF_01254 0.0 rtpR 1.17.4.2 - F ko:K00527 ko00230,ko00240,ko01100,map00230,map00240,map01100 ko00000,ko00001,ko00002,ko01000 ribonucleoside-triphosphate reductase activity
PCBEPFIF_01255 3.18e-55 - - - S - - - Domain of unknown function (DUF4430)
PCBEPFIF_01256 3.17e-32 - - - S - - - Domain of unknown function (DUF4430)
PCBEPFIF_01257 4.79e-74 - - - S ko:K16927 - ko00000,ko00002,ko02000 ECF transporter, substrate-specific component
PCBEPFIF_01258 9.25e-104 - - - S - - - Cob(I)alamin adenosyltransferase
PCBEPFIF_01259 3.86e-190 - - - S - - - Putative ABC-transporter type IV
PCBEPFIF_01261 8.55e-97 potE - - E - - - thought to be involved in transport amino acids across the membrane
PCBEPFIF_01262 1.22e-10 potE - - E - - - Amino acid permease
PCBEPFIF_01264 2.32e-34 - - - K ko:K07729 - ko00000,ko03000 Helix-turn-helix XRE-family like proteins
PCBEPFIF_01266 6.82e-43 - - - - - - - -
PCBEPFIF_01267 2.03e-95 - - - S - - - An automated process has identified a potential problem with this gene model
PCBEPFIF_01268 7.46e-60 - - - S - - - Uncharacterized protein conserved in bacteria (DUF2263)
PCBEPFIF_01269 2.14e-163 - - - S - - - SLAP domain
PCBEPFIF_01270 1.43e-119 - - - - - - - -
PCBEPFIF_01272 2.11e-160 - - - M ko:K14193 ko05150,map05150 ko00000,ko00001 Iron Transport-associated domain
PCBEPFIF_01273 5.92e-203 isdE - - P ko:K02016 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Periplasmic binding protein
PCBEPFIF_01274 1.89e-202 isdF - - U ko:K02015 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PCBEPFIF_01275 1.49e-178 - 3.6.3.34 - HP ko:K02013 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 abc transporter atp-binding protein
PCBEPFIF_01276 2.22e-60 hupB2 - - L ko:K03530 - ko00000,ko03032,ko03036,ko03400 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
PCBEPFIF_01277 2.74e-69 - - - S ko:K19157 - ko00000,ko01000,ko02048 Bacterial toxin of type II toxin-antitoxin system, YafQ
PCBEPFIF_01278 9.43e-52 - - - S ko:K07473 - ko00000,ko02048 RelB antitoxin
PCBEPFIF_01279 7.04e-218 - - - G - - - BadF/BadG/BcrA/BcrD ATPase family
PCBEPFIF_01280 0.0 - - - S - - - membrane
PCBEPFIF_01281 0.0 pbp2b - - M ko:K00687,ko:K12553,ko:K21465,ko:K21466 ko00550,ko01100,ko01501,map00550,map01100,map01501 ko00000,ko00001,ko01000,ko01011 Penicillin-binding Protein
PCBEPFIF_01282 6.25e-29 rpmG - - J ko:K02913 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL33 family
PCBEPFIF_01283 1.94e-126 fthC 6.3.3.2 - H ko:K01934 ko00670,ko01100,map00670,map01100 ko00000,ko00001,ko01000 Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
PCBEPFIF_01284 1.32e-153 gluP 3.4.21.105 - S ko:K19225 - ko00000,ko01000,ko01002 Rhomboid family
PCBEPFIF_01285 1e-47 yqgQ - - S - - - Bacterial protein of unknown function (DUF910)
PCBEPFIF_01286 4.95e-89 yqhL - - P - - - Rhodanese-like protein
PCBEPFIF_01287 1.98e-218 miaA 2.5.1.75 - F ko:K00791 ko00908,ko01100,ko01110,map00908,map01100,map01110 ko00000,ko00001,ko01000,ko01006,ko03016 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
PCBEPFIF_01288 2.22e-286 ynbB - - P - - - aluminum resistance
PCBEPFIF_01289 0.0 glnA 6.3.1.2 - E ko:K01915 ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727 ko00000,ko00001,ko01000,ko04147 glutamine synthetase
PCBEPFIF_01290 3.36e-219 - - - - - - - -
PCBEPFIF_01291 2e-203 - - - - - - - -
PCBEPFIF_01292 1.38e-76 - - - L - - - Transposase
PCBEPFIF_01293 9.91e-150 - - - S - - - Peptidase family M23
PCBEPFIF_01294 0.0 - - - L - - - Transposase
PCBEPFIF_01295 3.96e-140 msrA 1.8.4.11, 1.8.4.12 - O ko:K07304,ko:K12267 - ko00000,ko01000 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PCBEPFIF_01297 1.35e-203 yitT - - S - - - Uncharacterised 5xTM membrane BCR, YitT family COG1284
PCBEPFIF_01298 1.91e-151 - - - - - - - -
PCBEPFIF_01299 1.3e-203 thrB 2.7.1.39 - F ko:K00872 ko00260,ko01100,ko01110,ko01120,ko01230,map00260,map01100,map01110,map01120,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
PCBEPFIF_01300 1.71e-282 hom 1.1.1.3 - E ko:K00003 ko00260,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00270,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 homoserine dehydrogenase
PCBEPFIF_01301 0.0 thrC 4.2.3.1 - E ko:K01733 ko00260,ko00750,ko01100,ko01110,ko01120,ko01230,map00260,map00750,map01100,map01110,map01120,map01230 ko00000,ko00001,ko00002,ko01000 Threonine synthase
PCBEPFIF_01302 0.0 lysC 2.7.2.4 - E ko:K00928 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the aspartokinase family
PCBEPFIF_01303 3.38e-133 yrgI 5.4.2.11 - G ko:K01834 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Histidine phosphatase superfamily (branch 1)
PCBEPFIF_01304 0.0 - - - L - - - PLD-like domain
PCBEPFIF_01305 5.9e-103 - - - K - - - sequence-specific DNA binding
PCBEPFIF_01306 0.0 - - - V ko:K06148 - ko00000,ko02000 ABC-type multidrug transport system, ATPase and permease components
PCBEPFIF_01307 0.0 - - - V ko:K06148 - ko00000,ko02000 ABC-type multidrug transport system, ATPase and permease components
PCBEPFIF_01308 2.3e-155 - - - - - - - -
PCBEPFIF_01309 2.92e-153 - - - G - - - Antibiotic biosynthesis monooxygenase
PCBEPFIF_01310 2.67e-125 - - - - - - - -
PCBEPFIF_01311 6.93e-140 - - - K - - - LysR substrate binding domain
PCBEPFIF_01312 4.04e-29 - - - - - - - -
PCBEPFIF_01313 6.21e-287 - - - S - - - Sterol carrier protein domain
PCBEPFIF_01314 1.56e-125 citX 2.7.7.61 - HI ko:K05964 ko02020,map02020 ko00000,ko00001,ko01000 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase
PCBEPFIF_01315 5.96e-139 arcC 2.7.2.2 - E ko:K00926 ko00220,ko00230,ko00910,ko01100,ko01120,ko01200,map00220,map00230,map00910,map01100,map01120,map01200 ko00000,ko00001,ko01000 Belongs to the carbamate kinase family
PCBEPFIF_01316 4.04e-36 argF 2.1.3.3, 2.7.2.2 - E ko:K00611,ko:K00926 ko00220,ko00230,ko00910,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00220,map00230,map00910,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
PCBEPFIF_01317 1.81e-82 argF 2.1.3.3 - E ko:K00611 ko00220,ko01100,ko01110,ko01130,ko01230,map00220,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
PCBEPFIF_01318 9.11e-302 arcA 3.5.3.6 - E ko:K01478 ko00220,ko01100,ko01110,ko01130,map00220,map01100,map01110,map01130 ko00000,ko00001,ko01000 Arginine
PCBEPFIF_01319 1.5e-177 lysR5 - - K - - - LysR substrate binding domain
PCBEPFIF_01320 0.0 - - - P - - - Cation transporter/ATPase, N-terminus
PCBEPFIF_01321 9.14e-33 - - - S - - - Metal binding domain of Ada
PCBEPFIF_01322 3.82e-52 ybhL - - S ko:K06890 - ko00000 Belongs to the BI1 family
PCBEPFIF_01323 0.000168 ybhL - - S ko:K06890 - ko00000 Belongs to the BI1 family
PCBEPFIF_01324 4.39e-268 - - - S ko:K09963 - ko00000 Bacterial protein of unknown function (DUF871)
PCBEPFIF_01325 9.13e-253 - 1.8.1.7 - C ko:K00383,ko:K21739 ko00480,ko04918,map00480,map04918 ko00000,ko00001,ko01000 Pyridine nucleotide-disulfide oxidoreductase
PCBEPFIF_01326 2.47e-54 tnpA1 - - L - - - PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
PCBEPFIF_01327 3.42e-232 trxB 1.8.1.9 - C ko:K00384 ko00450,map00450 ko00000,ko00001,ko01000 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
PCBEPFIF_01328 6.69e-239 gpsA 1.1.1.94 - I ko:K00057 ko00564,ko01110,map00564,map01110 ko00000,ko00001,ko01000 Glycerol-3-phosphate dehydrogenase
PCBEPFIF_01329 1.02e-196 lgt - - M ko:K13292 - ko00000,ko01000 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
PCBEPFIF_01330 2.78e-225 hprK - - F ko:K06023 - ko00000,ko01000 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
PCBEPFIF_01331 1.02e-27 - - - - - - - -
PCBEPFIF_01332 3.19e-238 prfB - - J ko:K02836 - ko00000,ko03012 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
PCBEPFIF_01333 0.0 secA - - U ko:K03070 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
PCBEPFIF_01334 2.9e-122 hpf - - J ko:K05808 - ko00000,ko03009 Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
PCBEPFIF_01335 3.57e-173 comFC - - S ko:K02242 - ko00000,ko00002,ko02044 Competence protein
PCBEPFIF_01336 2.68e-314 comFA - - L ko:K02240 - ko00000,ko00002,ko02044 Helicase C-terminal domain protein
PCBEPFIF_01337 2.92e-153 yvyE 3.4.13.9 - S ko:K01271 - ko00000,ko01000,ko01002 YigZ family
PCBEPFIF_01338 1.94e-268 tagO 2.7.8.33, 2.7.8.35 - M ko:K02851 - ko00000,ko01000,ko01003,ko01005 transferase
PCBEPFIF_01339 3.03e-293 rny - - S ko:K18682 ko03018,map03018 ko00000,ko00001,ko01000,ko03019 Endoribonuclease that initiates mRNA decay
PCBEPFIF_01340 2.02e-249 recA - - L ko:K03553 ko03440,map03440 ko00000,ko00001,ko00002,ko03400 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
PCBEPFIF_01341 3.92e-123 pgsA 2.7.8.5 - I ko:K00995 ko00564,ko01100,map00564,map01100 ko00000,ko00001,ko01000 Belongs to the CDP-alcohol phosphatidyltransferase class-I family
PCBEPFIF_01342 1.63e-154 ymfM - - S ko:K15539 - ko00000 Helix-turn-helix domain
PCBEPFIF_01343 6.87e-172 fabG 1.1.1.100 - IQ ko:K00059 ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 Enoyl-(Acyl carrier protein) reductase
PCBEPFIF_01344 2.61e-299 ymfH - - S - - - Peptidase M16
PCBEPFIF_01345 4.2e-284 ymfF - - S - - - Peptidase M16 inactive domain protein
PCBEPFIF_01346 0.0 ftsK - - D ko:K03466 - ko00000,ko03036 Belongs to the FtsK SpoIIIE SftA family
PCBEPFIF_01347 3.12e-91 - - - S - - - Protein of unknown function (DUF1149)
PCBEPFIF_01348 2.12e-136 cspR 2.1.1.207 - J ko:K03216 - ko00000,ko01000,ko03016 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
PCBEPFIF_01349 2.19e-270 XK27_05220 - - S - - - AI-2E family transporter
PCBEPFIF_01350 1.99e-87 srlB 2.7.1.198 - G ko:K02781 ko00051,ko02060,map00051,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system glucitol/sorbitol-specific IIA component
PCBEPFIF_01351 8.32e-255 pgl 3.1.1.31 - G ko:K07404 ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Lactonase, 7-bladed beta-propeller
PCBEPFIF_01352 1.29e-56 - - - L ko:K03111 ko03030,ko03430,ko03440,map03030,map03430,map03440 ko00000,ko00001,ko03029,ko03032,ko03400 Single-strand binding protein family
PCBEPFIF_01353 8.82e-129 - - - L - - - Phage integrase, N-terminal SAM-like domain
PCBEPFIF_01355 2.85e-29 - - - - - - - -
PCBEPFIF_01356 1.78e-16 - - - S - - - Protein of unknown function (DUF2922)
PCBEPFIF_01358 1.47e-18 - - - - - - - -
PCBEPFIF_01360 5.28e-129 - - - V - - - regulation of methylation-dependent chromatin silencing
PCBEPFIF_01361 2.09e-139 - 2.1.1.37 - L ko:K00558 ko00270,ko01100,ko05206,map00270,map01100,map05206 ko00000,ko00001,ko00002,ko01000,ko02048,ko03032,ko03036 C-5 cytosine-specific DNA methylase
PCBEPFIF_01362 8.4e-255 - - - S - - - Domain of unknown function (DUF389)
PCBEPFIF_01363 3.37e-110 - - - - - - - -
PCBEPFIF_01364 0.0 thrS 6.1.1.3 - J ko:K01868 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
PCBEPFIF_01365 5.35e-215 dnaI - - L ko:K11144 - ko00000,ko03032 Primosomal protein DnaI
PCBEPFIF_01366 0.0 dnaB2 - - L ko:K03346 - ko00000,ko03032 Replication initiation and membrane attachment
PCBEPFIF_01367 1.29e-106 nrdR - - K ko:K07738 - ko00000,ko03000 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
PCBEPFIF_01368 2.07e-134 coaE 2.7.1.24 - F ko:K00859 ko00770,ko01100,map00770,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
PCBEPFIF_01369 6.38e-194 fpg 3.2.2.23, 4.2.99.18 - L ko:K10563 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
PCBEPFIF_01370 0.0 polA 2.7.7.7 - L ko:K02335 ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440 ko00000,ko00001,ko01000,ko03032,ko03400 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
PCBEPFIF_01371 5.78e-55 - - - - - - - -
PCBEPFIF_01372 3.64e-188 levD - - G ko:K02771 ko00051,ko02060,map00051,map02060 ko00000,ko00001,ko00002,ko02000 PTS system mannose/fructose/sorbose family IID component
PCBEPFIF_01373 6.02e-175 levC - - M ko:K02795 ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060 ko00000,ko00001,ko00002,ko02000 PTS system sorbose-specific iic component
PCBEPFIF_01374 1.36e-116 levB 2.7.1.191 - G ko:K02794 ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system sorbose subfamily IIB component
PCBEPFIF_01375 3.72e-84 - - - G ko:K02744 ko00052,ko02060,map00052,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system fructose IIA component
PCBEPFIF_01376 6.22e-119 rbsB - - G ko:K10439 ko02010,ko02030,map02010,map02030 ko00000,ko00001,ko00002,ko02000 Periplasmic binding protein domain
PCBEPFIF_01377 2.25e-150 degS 2.7.13.3 - F ko:K07683,ko:K07777 ko02020,map02020 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Sensor histidine kinase
PCBEPFIF_01378 1.15e-123 vraR - - K ko:K07694,ko:K11618 ko02020,map02020 ko00000,ko00001,ko00002,ko02022 helix_turn_helix, Lux Regulon
PCBEPFIF_01379 1.97e-130 - - - G ko:K02027 - ko00000,ko00002,ko02000 Bacterial extracellular solute-binding protein
PCBEPFIF_01381 2.62e-149 deoC 4.1.2.4 - F ko:K01619 ko00030,map00030 ko00000,ko00001,ko01000 Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
PCBEPFIF_01382 1.98e-92 frlR1 - - K ko:K03710,ko:K10711 - ko00000,ko03000 UTRA
PCBEPFIF_01383 7.77e-153 mipB 2.2.1.2 - H ko:K00616,ko:K08314 ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Transaldolase/Fructose-6-phosphate aldolase
PCBEPFIF_01384 6.91e-20 - - - K - - - transcriptional regulator
PCBEPFIF_01385 1.23e-100 - - - - - - - -
PCBEPFIF_01386 2.66e-74 - - - - - - - -
PCBEPFIF_01387 2.94e-137 - 3.1.21.3 - V ko:K01154 - ko00000,ko01000,ko02048 Type I restriction modification DNA specificity domain
PCBEPFIF_01388 0.0 hsdM 2.1.1.72 - V ko:K03427 - ko00000,ko01000,ko02048 type I restriction-modification system
PCBEPFIF_01389 0.0 hsdR 3.1.21.3 - L ko:K01153 - ko00000,ko01000,ko02048 Type I restriction enzyme R protein N terminus (HSDR_N)
PCBEPFIF_01390 6.22e-264 purD 6.3.4.13 - F ko:K01945 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Belongs to the GARS family
PCBEPFIF_01391 2.21e-98 - - - C - - - Flavodoxin
PCBEPFIF_01392 7.58e-190 hflC - - O ko:K04087 - ko00000,ko00002,ko01000 prohibitin homologues
PCBEPFIF_01393 1.32e-68 - - - L ko:K07473 - ko00000,ko02048 RelB antitoxin
PCBEPFIF_01394 0.0 rnjA - - J ko:K12574 ko03018,map03018 ko00000,ko00001,ko01000,ko03019 An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PCBEPFIF_01395 1.09e-46 ykzG - - S - - - Belongs to the UPF0356 family
PCBEPFIF_01396 9.73e-132 def 3.5.1.88 - J ko:K01462 - ko00000,ko01000 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
PCBEPFIF_01397 0.0 typA - - T ko:K06207 - ko00000 GTP-binding protein TypA
PCBEPFIF_01398 3.35e-269 ftsW - - D ko:K03588 ko04112,map04112 ko00000,ko00001,ko02000,ko03036 Belongs to the SEDS family
PCBEPFIF_01399 9.94e-71 ylbG - - S - - - Uncharacterized protein conserved in bacteria (DUF2129)
PCBEPFIF_01400 3.01e-125 rsmD 2.1.1.171 - L ko:K08316 - ko00000,ko01000,ko03009 RNA methyltransferase, RsmD family
PCBEPFIF_01401 1.74e-107 coaD 2.7.7.3 - H ko:K00954 ko00770,ko01100,map00770,map01100 ko00000,ko00001,ko00002,ko01000 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
PCBEPFIF_01402 2.1e-246 lon - - T ko:K07177 ko02024,map02024 ko00000,ko00001,ko01002 Belongs to the peptidase S16 family
PCBEPFIF_01403 8.61e-123 comEA - - L ko:K02237 - ko00000,ko00002,ko02044 Competence protein ComEA
PCBEPFIF_01404 0.0 comEC - - S ko:K02238 - ko00000,ko00002,ko02044 Competence protein ComEC
PCBEPFIF_01405 2.57e-226 holA 2.7.7.7 - L ko:K02340 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase III delta subunit
PCBEPFIF_01406 6.28e-47 rpsT - - J ko:K02968 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds directly to 16S ribosomal RNA
PCBEPFIF_01407 7.11e-57 rpsO - - J ko:K02956 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
PCBEPFIF_01408 0.0 rnjB - - J ko:K12574 ko03018,map03018 ko00000,ko00001,ko01000,ko03019 An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PCBEPFIF_01409 1.98e-193 - - - - - - - -
PCBEPFIF_01410 4.06e-287 tuf - - J ko:K02358,ko:K15771 ko02010,map02010 ko00000,ko00001,ko00002,ko02000,ko03012,ko03029,ko04147 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
PCBEPFIF_01411 1.09e-292 tig - - D ko:K03545 - ko00000 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
PCBEPFIF_01412 3.04e-297 clpX - - O ko:K03544 ko04112,map04112 ko00000,ko00001,ko03110 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
PCBEPFIF_01413 3.9e-137 engB - - D ko:K03978 - ko00000,ko03036 Necessary for normal cell division and for the maintenance of normal septation
PCBEPFIF_01414 1.9e-28 potE - - E - - - Amino Acid
PCBEPFIF_01415 2.35e-132 potE - - E - - - Amino acid permease
PCBEPFIF_01416 2.55e-245 dapF 5.1.1.7 - E ko:K01778 ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
PCBEPFIF_01417 4.48e-34 - - - - - - - -
PCBEPFIF_01418 2.17e-35 - - - - - - - -
PCBEPFIF_01419 1.95e-45 - - - - - - - -
PCBEPFIF_01420 1.4e-69 - - - S - - - Enterocin A Immunity
PCBEPFIF_01421 1.39e-179 racD 5.1.1.13 - M ko:K01779 ko00250,ko01054,map00250,map01054 ko00000,ko00001,ko01000 Belongs to the aspartate glutamate racemases family
PCBEPFIF_01422 0.0 murE 6.3.2.13, 6.3.2.7 - M ko:K01928,ko:K05362 ko00300,ko00550,ko01100,map00300,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
PCBEPFIF_01423 1.32e-270 - - - T - - - His Kinase A (phosphoacceptor) domain
PCBEPFIF_01424 8.32e-157 vanR - - K - - - response regulator
PCBEPFIF_01425 1.31e-51 - - - S - - - HicB family
PCBEPFIF_01426 6.07e-261 - - - L - - - Probable transposase
PCBEPFIF_01428 0.0 ndvA - - V ko:K06147 - ko00000,ko02000 ABC transporter
PCBEPFIF_01429 0.0 - - - V ko:K06147,ko:K06148 - ko00000,ko02000 ABC transporter, ATP-binding protein
PCBEPFIF_01430 1.44e-139 - - - S - - - Protein of unknown function (DUF1129)
PCBEPFIF_01431 6.88e-257 ychF - - J ko:K06942 - ko00000,ko03009 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
PCBEPFIF_01432 1.1e-59 yyzM - - S - - - Bacterial protein of unknown function (DUF951)
PCBEPFIF_01433 1.05e-197 spo0J - - K ko:K03497 - ko00000,ko03000,ko03036,ko04812 Belongs to the ParB family
PCBEPFIF_01434 4.99e-178 soj - - D ko:K03496 - ko00000,ko03036,ko04812 Sporulation initiation inhibitor
PCBEPFIF_01435 2.91e-191 noc - - K ko:K03497 - ko00000,ko03000,ko03036,ko04812 Belongs to the ParB family
PCBEPFIF_01436 3.66e-166 rsmG 2.1.1.170 - J ko:K03501 - ko00000,ko01000,ko03009,ko03036 Specifically methylates the N7 position of a guanine in 16S rRNA
PCBEPFIF_01437 2.99e-75 cvpA - - S - - - Colicin V production protein
PCBEPFIF_01439 5.24e-230 apbE 2.7.1.180 - H ko:K03734 - ko00000,ko01000 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
PCBEPFIF_01440 1.57e-192 - 3.1.3.48 - T ko:K01104 - ko00000,ko01000 Tyrosine phosphatase family
PCBEPFIF_01441 2.58e-126 azr 1.5.1.36 - S ko:K22394 ko00740,ko01100,map00740,map01100 ko00000,ko00001,ko01000 NADPH-dependent FMN reductase
PCBEPFIF_01442 8.04e-124 azo1 1.5.1.36, 1.7.1.6 - S ko:K03206,ko:K19784,ko:K22393 ko00740,ko01100,map00740,map01100 ko00000,ko00001,ko01000 NADPH-dependent FMN reductase
PCBEPFIF_01443 1.56e-185 - - - L ko:K07496 - ko00000 Putative transposase DNA-binding domain
PCBEPFIF_01444 2.15e-82 - - - L - - - Resolvase, N-terminal
PCBEPFIF_01445 7.51e-145 - - - K - - - WHG domain
PCBEPFIF_01446 6.73e-51 - - - - - - - -
PCBEPFIF_01447 0.0 pepD4 - - E ko:K08659 - ko00000,ko01000,ko01002 Dipeptidase
PCBEPFIF_01448 2.12e-132 lolD - - V ko:K02003 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
PCBEPFIF_01449 3.28e-221 yxeA - - V ko:K02004 - ko00000,ko00002,ko02000 ABC transporter permease
PCBEPFIF_01450 2.24e-123 - - - K - - - Bacterial regulatory proteins, tetR family
PCBEPFIF_01451 2.35e-144 - - - G - - - phosphoglycerate mutase
PCBEPFIF_01452 2.92e-182 - - - S ko:K06889 - ko00000 Alpha/beta hydrolase family
PCBEPFIF_01453 7.18e-184 XK27_08125 - - S ko:K09861 - ko00000 Belongs to the UPF0246 family
PCBEPFIF_01454 5.5e-155 - - - - - - - -
PCBEPFIF_01455 2.25e-202 - - - C - - - Domain of unknown function (DUF4931)
PCBEPFIF_01456 2.54e-267 - - - S - - - Putative peptidoglycan binding domain
PCBEPFIF_01457 4.34e-22 - - - - - - - -
PCBEPFIF_01458 0.0 cps1C - - S ko:K03328 - ko00000 Membrane protein involved in the export of O-antigen and teichoic acid
PCBEPFIF_01459 4.05e-246 glf 5.4.99.9 - M ko:K01854 ko00052,ko00520,map00052,map00520 ko00000,ko00001,ko01000 UDP-galactopyranose mutase
PCBEPFIF_01460 1.76e-11 - 2.3.1.30 - E ko:K00640 ko00270,ko00920,ko01100,ko01110,ko01120,ko01200,ko01230,ko05111,map00270,map00920,map01100,map01110,map01120,map01200,map01230,map05111 ko00000,ko00001,ko00002,ko01000 Hexapeptide repeat of succinyl-transferase
PCBEPFIF_01461 2.66e-28 - - - S - - - Psort location CytoplasmicMembrane, score 9.99
PCBEPFIF_01462 1.58e-101 smpB - - J ko:K03664 - ko00000 the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
PCBEPFIF_01463 0.0 rnr - - J ko:K12573 ko03018,map03018 ko00000,ko00001,ko01000,ko03016,ko03019 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
PCBEPFIF_01464 1.3e-40 secG - - U ko:K03075 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Preprotein translocase
PCBEPFIF_01465 0.0 ltaS 2.7.8.20 - M ko:K19005 ko00561,ko01100,map00561,map01100 ko00000,ko00001,ko01000 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
PCBEPFIF_01466 8.57e-227 mprF - - S ko:K07027 - ko00000,ko02000 Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
PCBEPFIF_01467 9.03e-257 cpoA 2.4.1.208 GT4 M ko:K13677,ko:K13678 ko00561,ko01100,map00561,map01100 ko00000,ko00001,ko01000,ko01003 Glycosyltransferase, group 1 family protein
PCBEPFIF_01468 1.41e-285 - 2.4.1.337 GT4 M ko:K19002 ko00561,ko01100,map00561,map01100 ko00000,ko00001,ko01000,ko01003 Glycosyl transferase 4-like domain
PCBEPFIF_01496 1.69e-43 - - - - - - - -
PCBEPFIF_01497 1.69e-194 - - - - - - - -
PCBEPFIF_01498 3.32e-13 - - - - - - - -
PCBEPFIF_01499 6.63e-122 hpt 2.4.2.8 - F ko:K00760 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 ko00000,ko00001,ko01000 Belongs to the purine pyrimidine phosphoribosyltransferase family
PCBEPFIF_01500 2.57e-193 - - - S ko:K06921 - ko00000 Archaea bacterial proteins of unknown function
PCBEPFIF_01501 1.05e-137 - - - K ko:K06977 - ko00000 acetyltransferase
PCBEPFIF_01503 1.12e-89 rfbD 1.1.1.133 - M ko:K00067 ko00521,ko00523,ko01130,map00521,map00523,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
PCBEPFIF_01504 7.25e-49 - - - KQ - - - helix_turn_helix, mercury resistance
PCBEPFIF_01505 1.28e-69 - - - - ko:K19157 - ko00000,ko01000,ko02048 -
PCBEPFIF_01506 1.23e-57 - - - S ko:K07473 - ko00000,ko02048 RelB antitoxin
PCBEPFIF_01507 5.19e-90 - - - S - - - HicB_like antitoxin of bacterial toxin-antitoxin system
PCBEPFIF_01508 3.12e-21 - - - N - - - HicA toxin of bacterial toxin-antitoxin,
PCBEPFIF_01509 1.99e-245 sacB 2.4.1.10, 2.4.1.9 GH68 M ko:K00692,ko:K20811 ko00500,ko01100,ko02020,map00500,map01100,map02020 ko00000,ko00001,ko01000,ko01003 Levansucrase/Invertase
PCBEPFIF_01510 1.69e-131 sacB 2.4.1.10, 2.4.1.9 GH68 M ko:K00692,ko:K20811 ko00500,ko01100,ko02020,map00500,map01100,map02020 ko00000,ko00001,ko01000,ko01003 Levansucrase/Invertase
PCBEPFIF_01511 1.57e-78 - - - V - - - Abi-like protein
PCBEPFIF_01512 3.66e-46 rbtT - - P ko:K13021 - ko00000,ko02000 Major Facilitator Superfamily
PCBEPFIF_01513 7.46e-258 XK27_00915 - - C - - - Luciferase-like monooxygenase
PCBEPFIF_01514 7.94e-114 - - - K - - - GNAT family
PCBEPFIF_01515 1.46e-161 - - - S - - - Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
PCBEPFIF_01517 6.04e-49 - - - - - - - -
PCBEPFIF_01518 0.0 - - - P ko:K06148 - ko00000,ko02000 ABC transporter
PCBEPFIF_01519 0.0 - - - V ko:K06148 - ko00000,ko02000 ABC-type multidrug transport system, ATPase and permease components
PCBEPFIF_01520 0.0 yifK - - E ko:K03293 - ko00000 Amino acid permease
PCBEPFIF_01521 1.22e-229 thyA 2.1.1.45 - F ko:K00560 ko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523 ko00000,ko00001,ko00002,ko01000 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
PCBEPFIF_01522 2.26e-118 folA 1.5.1.3 - H ko:K00287 ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523 ko00000,ko00001,ko00002,ko01000 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
PCBEPFIF_01523 0.0 aha1 - - P ko:K12952 - ko00000,ko01000 E1-E2 ATPase
PCBEPFIF_01524 2.2e-224 - - - F ko:K15051 - ko00000 DNA/RNA non-specific endonuclease
PCBEPFIF_01525 1.78e-204 metQ - - P ko:K02073 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Belongs to the nlpA lipoprotein family
PCBEPFIF_01526 5.74e-243 metN - - P ko:K02071 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
PCBEPFIF_01527 2.34e-122 metI - - P ko:K02072 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter permease
PCBEPFIF_01528 0.0 fumC 4.2.1.2 - C ko:K01679 ko00020,ko00620,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko04934,ko05200,ko05211,map00020,map00620,map00720,map01100,map01110,map01120,map01130,map01200,map04934,map05200,map05211 ko00000,ko00001,ko00002,ko01000 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
PCBEPFIF_01529 0.0 frdA 1.3.5.4 - C ko:K00244 ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020 ko00000,ko00001,ko00002,ko01000 FAD binding domain
PCBEPFIF_01530 1.66e-217 ldh 1.1.1.27 - C ko:K00016 ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922 ko00000,ko00001,ko01000,ko04147 Belongs to the LDH MDH superfamily. LDH family
PCBEPFIF_01531 0.0 pepC4 3.4.22.40 - E ko:K01372 - ko00000,ko01000,ko01002 Peptidase C1-like family
PCBEPFIF_01532 1.51e-170 - - - H - - - Aldolase/RraA
PCBEPFIF_01533 0.0 citP - - P ko:K03319 - ko00000 Sodium:sulfate symporter transmembrane region
PCBEPFIF_01534 4.89e-196 - - - I - - - Alpha/beta hydrolase family
PCBEPFIF_01535 5.39e-251 citC 6.2.1.22 - H ko:K01910 ko02020,map02020 ko00000,ko00001,ko01000 Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
PCBEPFIF_01536 1.6e-59 citD - - C ko:K01646 ko02020,map02020 ko00000,ko00001 Covalent carrier of the coenzyme of citrate lyase
PCBEPFIF_01537 4.4e-215 citE 4.1.3.34 - G ko:K01644 ko02020,map02020 ko00000,ko00001,ko01000 Belongs to the HpcH HpaI aldolase family
PCBEPFIF_01538 0.0 citF 2.8.3.10 - H ko:K01643 ko02020,map02020 ko00000,ko00001,ko01000 Citrate (pro-3S)-lyase alpha chain
PCBEPFIF_01539 1.24e-93 ytwI - - S - - - Protein of unknown function (DUF441)
PCBEPFIF_01540 1.46e-31 - - - - - - - -
PCBEPFIF_01541 2.47e-187 cbiQ - - P ko:K16785 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 cobalt transport
PCBEPFIF_01542 0.0 ykoD - - P ko:K16786,ko:K16787 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ABC transporter, ATP-binding protein
PCBEPFIF_01543 6.28e-124 - - - S ko:K16924 - ko00000,ko00002,ko02000 UPF0397 protein
PCBEPFIF_01544 8.1e-87 - - - S - - - Domain of unknown function DUF1828
PCBEPFIF_01545 7.91e-14 - - - - - - - -
PCBEPFIF_01546 2.93e-67 - - - - - - - -
PCBEPFIF_01547 1.05e-226 citR - - K - - - Putative sugar-binding domain
PCBEPFIF_01548 1.86e-316 - - - S - - - Putative threonine/serine exporter
PCBEPFIF_01549 2.16e-114 ybaK - - S ko:K03976 - ko00000,ko01000,ko03016 Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
PCBEPFIF_01550 1.38e-223 prmA - - J ko:K02687 - ko00000,ko01000,ko03009 Ribosomal protein L11 methyltransferase
PCBEPFIF_01551 9.32e-81 - - - - - - - -
PCBEPFIF_01552 0.0 relA 2.7.6.5 - KT ko:K00951 ko00230,map00230 ko00000,ko00001,ko01000 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
PCBEPFIF_01553 1.8e-99 dtd - - J ko:K07560 - ko00000,ko01000,ko03016 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
PCBEPFIF_01554 4.28e-312 hisS 6.1.1.21 - J ko:K01892 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 histidyl-tRNA synthetase
PCBEPFIF_01555 0.0 aspS 6.1.1.12 - J ko:K01876 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
PCBEPFIF_01556 1.58e-283 aspC - - E ko:K00841 ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Aminotransferase
PCBEPFIF_01558 2.21e-275 coaBC 4.1.1.36, 6.3.2.5 - H ko:K01598,ko:K13038 ko00770,ko01100,map00770,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
PCBEPFIF_01559 2.39e-305 - - - L ko:K07496 - ko00000 transposase, IS605 OrfB family
PCBEPFIF_01560 1.33e-134 lacS - - G ko:K11104,ko:K16209 - ko00000,ko02000 Transporter
PCBEPFIF_01561 1.07e-194 lacZ 3.2.1.23 - G ko:K12308 ko00052,map00052 ko00000,ko00001,ko01000 -beta-galactosidase
PCBEPFIF_01563 6.54e-157 - - - L - - - Transposase
PCBEPFIF_01564 0.0 pgm 5.4.2.2 - G ko:K01835 ko00010,ko00030,ko00052,ko00230,ko00500,ko00520,ko00521,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00052,map00230,map00500,map00520,map00521,map01100,map01110,map01120,map01130 ko00000,ko00001,ko00002,ko01000 Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
PCBEPFIF_01565 0.0 uvrB - - L ko:K03702 ko03420,map03420 ko00000,ko00001,ko03400 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
PCBEPFIF_01566 0.0 uvrA - - L ko:K03701 ko03420,map03420 ko00000,ko00001,ko03400 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
PCBEPFIF_01567 1.88e-118 - - - S - - - Short repeat of unknown function (DUF308)
PCBEPFIF_01568 2.44e-211 yvcJ - - S ko:K06958 - ko00000,ko03019 Displays ATPase and GTPase activities
PCBEPFIF_01569 1.61e-250 yvcK - - S - - - Required for morphogenesis under gluconeogenic growth conditions
PCBEPFIF_01570 8.59e-221 whiA - - K ko:K09762 - ko00000 May be required for sporulation
PCBEPFIF_01571 1.16e-128 clpP 3.4.21.92 - O ko:K01358 ko04112,ko04212,map04112,map04212 ko00000,ko00001,ko01000,ko01002 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
PCBEPFIF_01572 0.0 - - - S - - - SH3-like domain
PCBEPFIF_01573 3.16e-144 ybbL - - S ko:K02068 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
PCBEPFIF_01574 1.17e-168 ybbM - - S ko:K02069 - ko00000,ko00002,ko02000 Uncharacterised protein family (UPF0014)
PCBEPFIF_01575 6.78e-124 - - - S - - - Domain of unknown function (DUF4811)
PCBEPFIF_01576 0.0 ycnB - - U - - - Belongs to the major facilitator superfamily
PCBEPFIF_01577 5.38e-101 - - - K - - - MerR HTH family regulatory protein
PCBEPFIF_01578 2.78e-150 - - - V ko:K11050 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter
PCBEPFIF_01579 4.98e-116 cylB - - V ko:K11051 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC-2 type transporter
PCBEPFIF_01580 1.62e-61 - - - K - - - LytTr DNA-binding domain
PCBEPFIF_01581 3.33e-44 - - - S - - - Protein of unknown function (DUF3021)
PCBEPFIF_01582 1.27e-178 - - - S - - - Cysteine-rich secretory protein family
PCBEPFIF_01583 0.0 ycaM - - E - - - amino acid
PCBEPFIF_01584 0.0 - - - - - - - -
PCBEPFIF_01586 1.35e-240 cggR - - K ko:K05311 - ko00000,ko03000 Putative sugar-binding domain
PCBEPFIF_01587 2.86e-244 gap 1.2.1.12 - G ko:K00134 ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
PCBEPFIF_01588 2.86e-286 pgk 2.7.2.3 - F ko:K00927 ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the phosphoglycerate kinase family
PCBEPFIF_01589 5.46e-183 tpiA 5.3.1.1 - G ko:K01803 ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko04147 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
PCBEPFIF_01590 3.07e-124 - - - - - - - -
PCBEPFIF_01591 1.7e-201 ycsE - - S - - - Sucrose-6F-phosphate phosphohydrolase
PCBEPFIF_01592 1.64e-174 ung 3.2.2.27 - L ko:K03648 ko03410,ko05340,map03410,map05340 ko00000,ko00001,ko01000,ko03400 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
PCBEPFIF_01593 1.9e-233 pta 2.3.1.8, 3.6.3.21 - C ko:K00625,ko:K02028 ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000,ko02000 phosphate acetyltransferase
PCBEPFIF_01594 5.86e-114 ydiB - - O ko:K06925 - ko00000,ko03016 Hydrolase, P-loop family
PCBEPFIF_01595 1.51e-127 dnaQ 2.7.7.7 - L ko:K02342 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase III
PCBEPFIF_01596 1.71e-209 murB 1.3.1.98 - M ko:K00075 ko00520,ko00550,ko01100,map00520,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Cell wall formation
PCBEPFIF_01597 3.58e-263 potA 3.6.3.30, 3.6.3.31 - P ko:K02010,ko:K11072 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
PCBEPFIF_01598 9.56e-177 potB - - P ko:K11071 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter permease
PCBEPFIF_01599 2.6e-170 potC - - P ko:K11070 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter permease
PCBEPFIF_01600 8.14e-265 potD - - P ko:K11069 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter
PCBEPFIF_01601 2.13e-194 dacA 2.7.7.85 - S ko:K18672 - ko00000,ko01000 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
PCBEPFIF_01602 2.76e-221 ybbR - - S - - - YbbR-like protein
PCBEPFIF_01603 0.0 glmM 5.4.2.10 - G ko:K03431 ko00520,ko01100,ko01130,map00520,map01100,map01130 ko00000,ko00001,ko01000 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
PCBEPFIF_01604 8.04e-190 - - - S - - - hydrolase
PCBEPFIF_01605 3.23e-98 copY - - K ko:K02171 ko01501,map01501 ko00000,ko00001,ko00002,ko01504,ko03000 Penicillinase repressor
PCBEPFIF_01606 5.74e-153 - - - - - - - -
PCBEPFIF_01607 3.07e-112 ptpA 3.1.3.48 - T ko:K01104 - ko00000,ko01000 Belongs to the low molecular weight phosphotyrosine protein phosphatase family
PCBEPFIF_01608 1.77e-262 glxK 2.7.1.165 - G ko:K00865 ko00260,ko00561,ko00630,ko01100,ko01120,ko01130,map00260,map00561,map00630,map01100,map01120,map01130 ko00000,ko00001,ko01000 Belongs to the glycerate kinase type-1 family
PCBEPFIF_01609 5.06e-196 bglG5 - - K ko:K03488 - ko00000,ko03000 CAT RNA binding domain
PCBEPFIF_01610 0.0 pts33BCA - - G ko:K02755,ko:K02756,ko:K02757 ko02060,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 phosphotransferase system
PCBEPFIF_01611 0.0 - 3.2.1.86 GT1 G ko:K01223 ko00010,ko00500,map00010,map00500 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 1 family
PCBEPFIF_01612 1.15e-232 ybcH - - D ko:K06889 - ko00000 Alpha beta
PCBEPFIF_01613 0.0 - - - E - - - Amino acid permease
PCBEPFIF_01615 4.8e-38 rpsN - - J ko:K02954 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PCBEPFIF_01616 9.93e-143 ylbE - - GM - - - NAD(P)H-binding
PCBEPFIF_01617 2.83e-121 - - - S - - - VanZ like family
PCBEPFIF_01618 5.65e-171 yebC - - K - - - Transcriptional regulatory protein
PCBEPFIF_01619 5.04e-231 comGA - - NU ko:K02243 - ko00000,ko00002,ko02044 Type II IV secretion system protein
PCBEPFIF_01620 5.15e-224 comGB - - NU ko:K02244 - ko00000,ko00002,ko02044 type II secretion system
PCBEPFIF_01621 7.88e-63 comGC - - U ko:K02245 - ko00000,ko00002,ko02044 competence protein ComGC
PCBEPFIF_01622 8.52e-93 - - - - ko:K02246 - ko00000,ko00002,ko02044 -
PCBEPFIF_01623 1.68e-55 - - - - - - - -
PCBEPFIF_01624 1.94e-100 - - - U ko:K02248 - ko00000,ko00002,ko02044 Putative Competence protein ComGF
PCBEPFIF_01625 3.69e-30 - - - - - - - -
PCBEPFIF_01626 4.37e-241 ytxK 2.1.1.72 - L ko:K00571 - ko00000,ko01000,ko02048 N-6 DNA Methylase
PCBEPFIF_01627 2.51e-280 ackA 2.7.2.1 - F ko:K00925 ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PCBEPFIF_01629 1.49e-128 - - - M - - - Protein of unknown function (DUF3737)
PCBEPFIF_01630 5.51e-285 patB 4.4.1.8 - E ko:K14155 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 ko00000,ko00001,ko01000,ko01007 Aminotransferase, class I
PCBEPFIF_01631 1.93e-242 manA 5.3.1.8 - G ko:K01809 ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 mannose-6-phosphate isomerase
PCBEPFIF_01632 9.01e-90 - - - S - - - SdpI/YhfL protein family
PCBEPFIF_01633 1.73e-167 - - - K - - - Transcriptional regulatory protein, C terminal
PCBEPFIF_01634 0.0 yclK - - T - - - Histidine kinase
PCBEPFIF_01635 0.0 ltaS 2.7.8.20 - M ko:K19005 ko00561,ko01100,map00561,map01100 ko00000,ko00001,ko01000 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
PCBEPFIF_01636 5.3e-137 vanZ - - V - - - VanZ like family
PCBEPFIF_01637 0.0 pgi 5.3.1.9 - G ko:K01810 ko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the GPI family
PCBEPFIF_01638 1.39e-275 - - - EGP - - - Major Facilitator
PCBEPFIF_01639 3.24e-249 ampC - - V - - - Beta-lactamase
PCBEPFIF_01642 0.0 murE2 6.3.2.13 - M ko:K01928 ko00300,ko00550,map00300,map00550 ko00000,ko00001,ko01000,ko01011 Domain of unknown function (DUF1727)
PCBEPFIF_01643 4.06e-145 tdk 2.7.1.21 - F ko:K00857 ko00240,ko00983,ko01100,map00240,map00983,map01100 ko00000,ko00001,ko01000 thymidine kinase
PCBEPFIF_01644 1.89e-236 prfA - - J ko:K02835 - ko00000,ko03012 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
PCBEPFIF_01645 1.77e-198 prmC 2.1.1.297 - J ko:K02493 - ko00000,ko01000,ko03012 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
PCBEPFIF_01646 2.26e-243 ywlC 2.7.7.87 - J ko:K07566 - ko00000,ko01000,ko03009,ko03016 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
PCBEPFIF_01647 5.28e-146 upp 2.4.2.9 - F ko:K00761 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko01000 Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
PCBEPFIF_01648 1.01e-166 atpB - - C ko:K02108 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194,ko03110 it plays a direct role in the translocation of protons across the membrane
PCBEPFIF_01649 4.83e-37 atpE - - C ko:K02110 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PCBEPFIF_01650 1.43e-82 atpF - - C ko:K02109 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
PCBEPFIF_01651 1.96e-121 atpH - - C ko:K02113 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PCBEPFIF_01652 0.0 atpA 3.6.3.14 - C ko:K02111 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194,ko01000 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
PCBEPFIF_01653 1.04e-221 atpG - - C ko:K02115 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
PCBEPFIF_01654 0.0 atpD 3.6.3.14 - C ko:K02112 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194,ko01000 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
PCBEPFIF_01655 2.45e-93 atpC - - C ko:K02114 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 Produces ATP from ADP in the presence of a proton gradient across the membrane
PCBEPFIF_01656 1.52e-43 - - - S - - - Protein of unknown function (DUF1146)
PCBEPFIF_01657 8.31e-228 mbl - - D ko:K03569 - ko00000,ko02048,ko03036,ko04812 Cell shape determining protein MreB Mrl
PCBEPFIF_01658 2.26e-68 ytjA - - S ko:K08998 - ko00000 Could be involved in insertion of integral membrane proteins into the membrane
PCBEPFIF_01659 1.26e-46 - - - S - - - Protein of unknown function (DUF2969)
PCBEPFIF_01660 2.05e-276 rodA - - D ko:K05837 - ko00000,ko03036 Belongs to the SEDS family
PCBEPFIF_01661 9.45e-104 uspA - - T - - - universal stress protein
PCBEPFIF_01662 1.35e-56 - - - - - - - -
PCBEPFIF_01663 5.13e-303 rarA - - L ko:K07478 - ko00000 recombination factor protein RarA
PCBEPFIF_01664 5.68e-110 - - - S - - - Protein of unknown function (DUF1694)
PCBEPFIF_01665 3.07e-142 rpsD - - J ko:K02986 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
PCBEPFIF_01666 0.0 ezrA - - D ko:K06286 - ko00000,ko03036 modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
PCBEPFIF_01667 1.74e-272 iscS2 2.8.1.7 - E ko:K04487 ko00730,ko01100,ko04122,map00730,map01100,map04122 ko00000,ko00001,ko01000,ko02048,ko03016,ko03029 Aminotransferase class V
PCBEPFIF_01668 4.74e-286 thiI 2.8.1.4 - H ko:K03151 ko00730,ko01100,ko04122,map00730,map01100,map04122 ko00000,ko00001,ko01000,ko03016 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
PCBEPFIF_01670 8.56e-105 - - - K - - - Helix-turn-helix XRE-family like proteins
PCBEPFIF_01671 1.6e-79 - - - - - - - -
PCBEPFIF_01672 3.46e-42 - - - S - - - Protein of unknown function (DUF4065)
PCBEPFIF_01674 5.88e-37 - - - - - - - -
PCBEPFIF_01676 1.18e-253 - - - L - - - COG2826 Transposase and inactivated derivatives, IS30 family
PCBEPFIF_01677 7.55e-53 - - - S - - - Transglycosylase associated protein
PCBEPFIF_01678 4.08e-270 - - - M ko:K07273 - ko00000 Glycosyl hydrolases family 25
PCBEPFIF_01679 4.36e-142 XK27_00160 - - S - - - Domain of unknown function (DUF5052)
PCBEPFIF_01680 3.03e-90 - - - - - - - -
PCBEPFIF_01681 6.14e-259 xerS - - L ko:K03733 - ko00000,ko03036 Belongs to the 'phage' integrase family
PCBEPFIF_01682 0.0 mutS1 - - L ko:K07456 ko03430,map03430 ko00000,ko00001,ko03400 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
PCBEPFIF_01683 1.4e-205 - - - S - - - EDD domain protein, DegV family
PCBEPFIF_01684 2.06e-88 - - - - - - - -
PCBEPFIF_01685 0.0 FbpA - - K - - - Fibronectin-binding protein
PCBEPFIF_01686 0.0 carB1 6.3.5.5 - F ko:K01955 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Carbamoyl-phosphate synthase
PCBEPFIF_01687 1.18e-254 carA 6.3.5.5 - F ko:K01956 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Carbamoyl-phosphate synthetase glutamine chain
PCBEPFIF_01688 2.28e-221 rluD 5.4.99.23 - J ko:K06180 - ko00000,ko01000,ko03009 Responsible for synthesis of pseudouridine from uracil
PCBEPFIF_01689 1.1e-102 lspA 3.4.23.36 - MU ko:K03101 ko03060,map03060 ko00000,ko00001,ko01000,ko01002 This protein specifically catalyzes the removal of signal peptides from prolipoproteins
PCBEPFIF_01690 0.0 fhs 6.3.4.3 - F ko:K01938 ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Belongs to the formate--tetrahydrofolate ligase family
PCBEPFIF_01691 1.61e-70 - - - - - - - -
PCBEPFIF_01692 2.66e-197 psd 4.1.1.65 - I ko:K01613 ko00564,ko01100,ko01110,map00564,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Belongs to the phosphatidylserine decarboxylase family
PCBEPFIF_01693 7.87e-221 - - - D - - - nuclear chromosome segregation
PCBEPFIF_01694 1.13e-89 - - - S - - - Bacterial mobilisation protein (MobC)
PCBEPFIF_01695 2.25e-37 - - - - - - - -
PCBEPFIF_01696 0.0 - - - J - - - Elongation factor G, domain IV
PCBEPFIF_01697 5.55e-80 psd 4.1.1.65 - I ko:K01613 ko00564,ko01100,ko01110,map00564,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Belongs to the phosphatidylserine decarboxylase family
PCBEPFIF_01698 6.62e-102 - - - S ko:K07126 - ko00000 Sel1-like repeats.
PCBEPFIF_01699 1.13e-133 - - - S - - - AAA domain
PCBEPFIF_01700 1.18e-229 - - - - - - - -
PCBEPFIF_01701 2.75e-38 - - - - - - - -
PCBEPFIF_01702 2.01e-102 - - - S - - - HIRAN
PCBEPFIF_01703 4.88e-58 - - - S ko:K07126 - ko00000 Sel1-like repeats.
PCBEPFIF_01704 0.0 - - - D - - - GA module
PCBEPFIF_01705 7.37e-216 - - - L - - - Belongs to the 'phage' integrase family
PCBEPFIF_01706 4.07e-30 - - - S - - - Domain of unknown function (DUF3173)
PCBEPFIF_01708 2.37e-23 - - - D - - - Ftsk spoiiie family protein
PCBEPFIF_01712 3.18e-175 yeeC - - P - - - T5orf172
PCBEPFIF_01713 0.0 - - - L - - - DEAD-like helicases superfamily
PCBEPFIF_01715 0.0 yeeA - - V - - - Type II restriction enzyme, methylase subunits
PCBEPFIF_01717 2.16e-80 - - - L - - - Resolvase, N-terminal
PCBEPFIF_01718 0.0 - - - L ko:K07496 - ko00000 Putative transposase DNA-binding domain
PCBEPFIF_01719 8.34e-100 - 3.1.21.3 - V ko:K01154 - ko00000,ko01000,ko02048 Type I restriction modification DNA specificity domain
PCBEPFIF_01720 0.0 hsdM 2.1.1.72 - V ko:K03427 - ko00000,ko01000,ko02048 type I restriction-modification system
PCBEPFIF_01721 0.0 hsdR 3.1.21.3 - L ko:K01153 - ko00000,ko01000,ko02048 DEAD/DEAH box helicase
PCBEPFIF_01722 0.0 - - - S - - - SLAP domain
PCBEPFIF_01724 2.52e-303 XK27_01810 - - S - - - Calcineurin-like phosphoesterase
PCBEPFIF_01725 1.43e-80 - - - S ko:K07006 - ko00000 Pyridoxamine 5'-phosphate oxidase
PCBEPFIF_01726 3.19e-132 - - - V - - - Eco57I restriction-modification methylase
PCBEPFIF_01731 1.12e-38 - - - E - - - IrrE N-terminal-like domain
PCBEPFIF_01732 1.42e-39 - - - K - - - Helix-turn-helix
PCBEPFIF_01733 0.0 - - - S - - - PglZ domain
PCBEPFIF_01734 6.46e-214 - - - K ko:K02529 - ko00000,ko03000 Periplasmic binding protein-like domain
PCBEPFIF_01735 2.14e-48 - - - K - - - Transcriptional regulator, AbiEi antitoxin
PCBEPFIF_01736 1.77e-93 def2 3.5.1.88 - J ko:K01462 - ko00000,ko01000 Removes the formyl group from the N-terminal Met of newly synthesized proteins
PCBEPFIF_01737 6.35e-291 - - - N ko:K09384 - ko00000 Uncharacterized conserved protein (DUF2075)
PCBEPFIF_01738 1.36e-260 pbpX - - V - - - Beta-lactamase
PCBEPFIF_01739 0.0 - - - L - - - Helicase C-terminal domain protein
PCBEPFIF_01740 7.47e-95 - - - E ko:K20265 ko02024,map02024 ko00000,ko00001,ko02000 amino acid
PCBEPFIF_01741 0.0 - - - L - - - Probable transposase
PCBEPFIF_01742 3.72e-145 - - - L - - - Resolvase, N terminal domain
PCBEPFIF_01743 8.21e-120 - - - S - - - reductase
PCBEPFIF_01744 3.84e-192 yxeH - - S - - - hydrolase
PCBEPFIF_01745 8e-143 gyaR 1.1.1.26, 1.1.1.399, 1.1.1.95 - CH ko:K00015,ko:K00058 ko00260,ko00630,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00260,map00630,map00680,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PCBEPFIF_01746 0.0 yhdG - - E ko:K03294 - ko00000 Amino Acid
PCBEPFIF_01747 3.87e-141 yngC - - S - - - SNARE associated Golgi protein
PCBEPFIF_01748 0.0 uvrC - - L ko:K03703 ko03420,map03420 ko00000,ko00001,ko03400 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
PCBEPFIF_01749 1.88e-309 obg - - S ko:K03979 - ko00000,ko01000,ko03009 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
PCBEPFIF_01750 0.0 oatA - - I - - - Acyltransferase
PCBEPFIF_01751 1.75e-225 rnz 3.1.26.11 - J ko:K00784 ko03013,map03013 ko00000,ko00001,ko01000,ko03016 Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
PCBEPFIF_01752 1.01e-184 - - - S ko:K07124 - ko00000 Belongs to the short-chain dehydrogenases reductases (SDR) family
PCBEPFIF_01753 6.24e-38 - - - S - - - Lipopolysaccharide assembly protein A domain
PCBEPFIF_01754 5.14e-38 rpmF - - J ko:K02911 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011,ko03029 Belongs to the bacterial ribosomal protein bL32 family
PCBEPFIF_01755 0.0 yfkN 3.1.3.6, 3.1.4.16 - F ko:K01119 ko00230,ko00240,map00230,map00240 ko00000,ko00001,ko01000 Belongs to the 5'-nucleotidase family
PCBEPFIF_01756 1.25e-38 - - - S - - - Protein of unknown function (DUF2929)
PCBEPFIF_01757 0.0 dnaE 2.7.7.7 - L ko:K02337 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase
PCBEPFIF_01758 5.46e-233 pfkA 2.7.1.11 - F ko:K00850 ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04152,ko05230,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04152,map05230 ko00000,ko00001,ko00002,ko01000,ko01009,ko03019 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
PCBEPFIF_01759 0.0 pyk 2.7.1.40 - G ko:K00873 ko00010,ko00230,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko04930,ko05165,ko05203,ko05230,map00010,map00230,map00620,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map04930,map05165,map05203,map05230 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Belongs to the pyruvate kinase family
PCBEPFIF_01760 4.41e-216 yitL - - S ko:K00243 - ko00000 S1 domain
PCBEPFIF_01761 1.73e-215 xerD - - D ko:K04763 - ko00000,ko03036 recombinase XerD
PCBEPFIF_01762 7.97e-82 ribT - - K ko:K02859 - ko00000 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PCBEPFIF_01763 1.81e-169 scpA - - D ko:K05896 - ko00000,ko03036 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
PCBEPFIF_01764 7.57e-135 scpB - - D ko:K06024 - ko00000,ko03036 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
PCBEPFIF_01765 4.65e-168 rluB 5.4.99.22 - J ko:K06178 - ko00000,ko01000,ko03009 Belongs to the pseudouridine synthase RsuA family
PCBEPFIF_01766 8.49e-146 ribU - - U - - - Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
PCBEPFIF_01767 1.13e-41 - - - M - - - Lysin motif
PCBEPFIF_01768 1.96e-148 cmk 2.7.4.25 - F ko:K00945 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the cytidylate kinase family. Type 1 subfamily
PCBEPFIF_01769 1.4e-281 rpsA - - J ko:K02945 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal protein S1
PCBEPFIF_01770 5.45e-314 der - - S ko:K03977 - ko00000,ko03009 GTPase that plays an essential role in the late steps of ribosome biogenesis
PCBEPFIF_01771 8.21e-57 hup - - L ko:K03530 - ko00000,ko03032,ko03036,ko03400 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
PCBEPFIF_01772 3.52e-293 XK27_05225 - - S - - - Tetratricopeptide repeat protein
PCBEPFIF_01773 0.0 cls - - I ko:K06131 ko00564,ko01100,map00564,map01100 ko00000,ko00001,ko01000 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PCBEPFIF_01774 0.0 - - - V - - - ABC transporter transmembrane region
PCBEPFIF_01775 1.01e-64 - - - - - - - -
PCBEPFIF_01776 1.76e-136 yokL3 - - J - - - Acetyltransferase (GNAT) domain
PCBEPFIF_01777 2.72e-102 - - - - - - - -
PCBEPFIF_01779 2.85e-211 - - - P ko:K02077 - ko00000,ko00002,ko02000 Belongs to the bacterial solute-binding protein 9 family
PCBEPFIF_01782 7.29e-287 metK 2.5.1.6 - H ko:K00789 ko00270,ko01100,ko01110,ko01230,map00270,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
PCBEPFIF_01783 0.0 mdr - - EGP - - - Major Facilitator
PCBEPFIF_01784 0.0 pts32BC 2.7.1.211 - G ko:K02808,ko:K02809,ko:K02810 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 phosphotransferase system
PCBEPFIF_01785 1.74e-198 murQ 4.2.1.126 - G ko:K07106 ko00520,ko01100,map00520,map01100 ko00000,ko00001,ko01000 Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
PCBEPFIF_01786 1.21e-244 - - - S ko:K09963 - ko00000 Bacterial protein of unknown function (DUF871)
PCBEPFIF_01787 4.28e-190 - - - K - - - rpiR family
PCBEPFIF_01788 0.0 cydA 1.10.3.14 - C ko:K00425 ko00190,ko01100,ko02020,map00190,map01100,map02020 ko00000,ko00001,ko00002,ko01000 ubiquinol oxidase
PCBEPFIF_01789 1.03e-237 cydB 1.10.3.14 - C ko:K00426 ko00190,ko01100,ko02020,map00190,map01100,map02020 ko00000,ko00001,ko00002,ko01000 Cytochrome d ubiquinol oxidase subunit II
PCBEPFIF_01790 0.0 cydC - - CO ko:K16013 ko02010,map02010 ko00000,ko00001,ko02000 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
PCBEPFIF_01791 0.0 cydD - - CO ko:K16012 ko02010,map02010 ko00000,ko00001,ko02000 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
PCBEPFIF_01792 8.7e-166 menG 2.1.1.163, 2.1.1.201 - H ko:K03183 ko00130,ko01100,ko01110,map00130,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
PCBEPFIF_01793 6.83e-227 hepT 2.5.1.30 - H ko:K00805 ko00900,ko01110,map00900,map01110 ko00000,ko00001,ko01000,ko01006 Belongs to the FPP GGPP synthase family
PCBEPFIF_01794 1.77e-207 menA 2.5.1.74 - H ko:K02548 ko00130,ko01100,ko01110,map00130,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko01006 1,4-dihydroxy-2-naphthoate
PCBEPFIF_01795 3.01e-294 yumB 1.6.99.3 - C ko:K03885 ko00190,map00190 ko00000,ko00001,ko01000 NADH dehydrogenase
PCBEPFIF_01796 1.66e-117 - - - S - - - PD-(D/E)XK nuclease family transposase
PCBEPFIF_01797 1.22e-218 - - - K - - - LysR substrate binding domain
PCBEPFIF_01798 1.39e-156 yodM 3.6.1.27 - I ko:K19302 ko00550,map00550 ko00000,ko00001,ko01000,ko01011 Acid phosphatase homologues
PCBEPFIF_01799 0.0 leuS 6.1.1.4 - J ko:K01869 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Belongs to the class-I aminoacyl-tRNA synthetase family
PCBEPFIF_01800 0.0 ytgP - - S ko:K03328 - ko00000 Polysaccharide biosynthesis protein
PCBEPFIF_01801 2.97e-64 pspC - - KT ko:K03973 - ko00000,ko02048,ko03000 PspC domain
PCBEPFIF_01803 4.1e-308 dacA 3.4.16.4 - M ko:K07258 ko00550,ko01100,map00550,map01100 ko00000,ko00001,ko01000,ko01002,ko01011 Belongs to the peptidase S11 family
PCBEPFIF_01804 1.83e-196 nnrD 4.2.1.136, 5.1.99.6 - H ko:K17758,ko:K17759 - ko00000,ko01000 Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
PCBEPFIF_01805 2.9e-131 - - - M - - - ErfK YbiS YcfS YnhG
PCBEPFIF_01806 0.0 argS 6.1.1.19 - J ko:K01887 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Arginyl-tRNA synthetase
PCBEPFIF_01807 4.24e-217 fba 4.1.2.13, 4.1.2.29 - G ko:K01624,ko:K03339 ko00010,ko00030,ko00051,ko00562,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00562,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Fructose-1,6-bisphosphate aldolase, class II
PCBEPFIF_01808 4.01e-122 - - - L - - - NUDIX domain
PCBEPFIF_01809 6.35e-51 - - - - - - - -
PCBEPFIF_01810 4.23e-59 - - - - - - - -
PCBEPFIF_01811 2.12e-299 - - - L - - - Transposase
PCBEPFIF_01812 5.98e-265 - - - S - - - PFAM Archaeal ATPase
PCBEPFIF_01813 2.88e-109 - - - S - - - GyrI-like small molecule binding domain
PCBEPFIF_01814 2.15e-211 - - - G ko:K02761 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko02000 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PCBEPFIF_01815 1.4e-262 - - - S - - - PFAM Archaeal ATPase
PCBEPFIF_01816 4.49e-284 - - - I - - - transferase activity, transferring acyl groups other than amino-acyl groups
PCBEPFIF_01817 1.45e-202 - - - K - - - Transcriptional regulator, LysR family
PCBEPFIF_01818 2.45e-219 mdcH 2.3.1.39 - I ko:K13935 - ko00000,ko01000 Acyl transferase domain
PCBEPFIF_01819 0.0 mdcA 2.3.1.187 - I ko:K13929 - ko00000,ko01000,ko02000 Malonate decarboxylase, alpha subunit, transporter
PCBEPFIF_01820 1.07e-67 mdcC - - C ko:K13931 - ko00000,ko02000 Malonate decarboxylase delta subunit (MdcD)
PCBEPFIF_01821 0.0 mdcD 4.1.1.87 - I ko:K13932 - ko00000,ko01000 Malonate decarboxylase gamma subunit (MdcE)
PCBEPFIF_01822 7.78e-158 mdcG 2.7.7.66 - H ko:K13934 - ko00000,ko01000 Phosphoribosyl-dephospho-CoA transferase MdcG
PCBEPFIF_01823 4.37e-200 - - - S - - - Alpha/beta hydrolase family
PCBEPFIF_01824 8.69e-190 citG 2.4.2.52 - H ko:K05966 ko02020,map02020 ko00000,ko00001,ko01000 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase
PCBEPFIF_01825 1.16e-72 - - - - - - - -
PCBEPFIF_01826 0.0 - 3.2.1.86 GT1 G ko:K01223 ko00010,ko00500,map00010,map00500 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 1 family
PCBEPFIF_01827 1.27e-69 ptcC - - U ko:K02761 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko02000 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PCBEPFIF_01828 1.34e-225 ptcC - - U ko:K02761 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko02000 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PCBEPFIF_01829 1.1e-181 glpF - - U ko:K02440 - ko00000,ko02000 Belongs to the MIP aquaporin (TC 1.A.8) family
PCBEPFIF_01830 7.87e-144 - - - G - - - Phosphoglycerate mutase family
PCBEPFIF_01831 0.0 pps 2.7.9.2 - H ko:K01007 ko00620,ko00680,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate
PCBEPFIF_01832 2.09e-208 rluA 5.4.99.23, 5.4.99.28, 5.4.99.29 - J ko:K06177,ko:K06180 - ko00000,ko01000,ko03009,ko03016 Responsible for synthesis of pseudouridine from uracil
PCBEPFIF_01833 0.0 pbp2A 2.4.1.129, 3.4.16.4 GT51 M ko:K12555 ko00550,ko01100,ko01501,map00550,map01100,map01501 ko00000,ko00001,ko01000,ko01003,ko01011 penicillin-binding protein
PCBEPFIF_01834 8.43e-73 yheA - - S - - - Belongs to the UPF0342 family
PCBEPFIF_01835 5.03e-297 yhaO - - L ko:K03547 - ko00000,ko03400 Ser Thr phosphatase family protein
PCBEPFIF_01836 0.0 yhaN - - L - - - AAA domain
PCBEPFIF_01837 3.33e-241 yhaM - - S ko:K03698 - ko00000,ko01000,ko03019 Metal dependent phosphohydrolases with conserved 'HD' motif.
PCBEPFIF_01840 9.67e-33 - - - S - - - Domain of unknown function DUF1829
PCBEPFIF_01841 3.85e-196 - - - - - - - -
PCBEPFIF_01842 1.37e-123 - - - - - - - -
PCBEPFIF_01843 4.33e-95 - - - - - - - -
PCBEPFIF_01845 7.33e-110 - - - K - - - DNA-templated transcription, initiation
PCBEPFIF_01847 8.64e-198 - - - S - - - PD-(D/E)XK nuclease family transposase
PCBEPFIF_01848 1.93e-170 - - - L - - - PFAM transposase IS116 IS110 IS902
PCBEPFIF_01849 1.82e-05 - - - - - - - -
PCBEPFIF_01851 1.98e-74 - - - K - - - Helix-turn-helix XRE-family like proteins
PCBEPFIF_01852 5.56e-38 yjdF3 - - S - - - Protein of unknown function (DUF2992)
PCBEPFIF_01853 1.6e-79 ydeP - - K - - - Transcriptional regulator, HxlR family
PCBEPFIF_01854 3.38e-253 qor 1.1.1.1, 1.6.5.5 - C ko:K00001,ko:K00344 ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220 ko00000,ko00001,ko01000 Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily
PCBEPFIF_01855 1.86e-124 ogt 2.1.1.63 - L ko:K00567 - ko00000,ko01000,ko03400 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
PCBEPFIF_01856 4.37e-124 - - - - - - - -
PCBEPFIF_01857 5.63e-179 - - - P - - - Voltage gated chloride channel
PCBEPFIF_01858 8.46e-239 - - - C - - - FMN-dependent dehydrogenase
PCBEPFIF_01859 1.05e-69 - - - - - - - -
PCBEPFIF_01860 1.17e-56 - - - - - - - -
PCBEPFIF_01861 3.28e-296 glyA 2.1.2.1 - E ko:K00600 ko00260,ko00460,ko00630,ko00670,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko01523,map00260,map00460,map00630,map00670,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map01523 ko00000,ko00001,ko00002,ko01000 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
PCBEPFIF_01862 0.0 - - - E - - - amino acid
PCBEPFIF_01863 3.87e-199 yhaX - - S - - - Sucrose-6F-phosphate phosphohydrolase
PCBEPFIF_01864 0.0 dexB 3.2.1.70 - G ko:K01215 - ko00000,ko01000 Alpha amylase, catalytic domain protein
PCBEPFIF_01865 1.07e-52 rpmE - - J ko:K02909 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal protein L31
PCBEPFIF_01866 0.0 murF 6.3.2.10 - M ko:K01929 ko00300,ko00550,ko01100,ko01502,map00300,map00550,map01100,map01502 ko00000,ko00001,ko01000,ko01011 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
PCBEPFIF_01867 0.0 cshA 3.6.4.13 - F ko:K05592 ko03018,map03018 ko00000,ko00001,ko01000,ko03009,ko03019 DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
PCBEPFIF_01868 9.39e-80 acpS 2.7.8.7 - I ko:K00997 ko00770,map00770 ko00000,ko00001,ko01000 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
PCBEPFIF_01869 2.17e-265 alr 5.1.1.1, 5.1.1.5 - E ko:K01775,ko:K20707 ko00473,ko01100,ko01502,map00473,map01100,map01502 ko00000,ko00001,ko01000,ko01011 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
PCBEPFIF_01870 1.23e-166 - - - S - - - (CBS) domain
PCBEPFIF_01871 3.57e-235 ldh 1.1.1.27 - C ko:K00016 ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922 ko00000,ko00001,ko01000,ko04147 Belongs to the LDH MDH superfamily. LDH family
PCBEPFIF_01872 1.89e-134 pth 3.1.1.29 - J ko:K01056 - ko00000,ko01000,ko03012 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
PCBEPFIF_01873 0.0 mfd - - L ko:K03723 ko03420,map03420 ko00000,ko00001,ko01000,ko03400 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
PCBEPFIF_01874 7.32e-46 yabO - - J - - - S4 domain protein
PCBEPFIF_01875 7.52e-78 divIC - - D ko:K13052 - ko00000,ko03036 Septum formation initiator
PCBEPFIF_01876 3.25e-81 - - - J ko:K07571 - ko00000 S1 RNA binding domain
PCBEPFIF_01877 1.36e-307 tilS 2.4.2.8, 6.3.4.19 - J ko:K04075,ko:K15780 ko00230,ko01100,ko01110,map00230,map01100,map01110 ko00000,ko00001,ko01000,ko03016 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
PCBEPFIF_01878 0.0 ftsH - - O ko:K03798 - ko00000,ko00002,ko01000,ko01002,ko03110 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
PCBEPFIF_01879 7.9e-214 hslO - - O ko:K04083 - ko00000,ko03110 Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
PCBEPFIF_01880 2.37e-249 dus - - J ko:K05540 - ko00000,ko01000,ko03016 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PCBEPFIF_01881 0.0 lysS 6.1.1.6 - J ko:K04567 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the class-II aminoacyl-tRNA synthetase family
PCBEPFIF_01887 3.19e-105 ytsP 1.8.4.14 - T ko:K08968 ko00270,map00270 ko00000,ko00001,ko01000 GAF domain-containing protein
PCBEPFIF_01888 0.0 clpC - - O ko:K03696 ko01100,map01100 ko00000,ko03110 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
PCBEPFIF_01889 0.0 rpoB 2.7.7.6 - K ko:K03043 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PCBEPFIF_01890 0.0 rpoC 2.7.7.6 - K ko:K03046 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PCBEPFIF_01891 7.71e-157 comC 3.4.23.43 - NOU ko:K02236 - ko00000,ko00002,ko01000,ko02044 Bacterial Peptidase A24 N-terminal domain
PCBEPFIF_01892 1.47e-91 rpsL - - J ko:K02950 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
PCBEPFIF_01893 6.89e-107 rpsG - - J ko:K02992 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
PCBEPFIF_01894 0.0 fusA - - J ko:K02355 - ko00000,ko03012,ko03029 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
PCBEPFIF_01895 4.46e-66 rpsJ - - J ko:K02946 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Involved in the binding of tRNA to the ribosomes
PCBEPFIF_01896 6.64e-146 rplC - - J ko:K02906 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
PCBEPFIF_01897 4.68e-138 rplD - - J ko:K02926 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms part of the polypeptide exit tunnel
PCBEPFIF_01898 1.14e-63 rplW - - J ko:K02892 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
PCBEPFIF_01899 4.01e-198 rplB - - J ko:K02886 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
PCBEPFIF_01900 1.14e-62 rpsS - - J ko:K02965 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
PCBEPFIF_01901 9.07e-73 rplV - - J ko:K02890 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
PCBEPFIF_01902 8.7e-157 rpsC - - J ko:K02982 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
PCBEPFIF_01903 1.66e-100 rplP - - J ko:K02878 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
PCBEPFIF_01904 1.45e-34 rpmC - - J ko:K02904 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the universal ribosomal protein uL29 family
PCBEPFIF_01905 1.56e-55 rpsQ - - J ko:K02961 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
PCBEPFIF_01906 3.62e-79 rplN - - J ko:K02874 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
PCBEPFIF_01907 3.03e-44 rplX - - J ko:K02895 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
PCBEPFIF_01908 1.23e-123 rplE - - J ko:K02931 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
PCBEPFIF_01909 1e-39 rpsN - - J ko:K02954 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PCBEPFIF_01910 7.94e-90 rpsH - - J ko:K02994 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
PCBEPFIF_01911 7.18e-121 rplF - - J ko:K02933 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
PCBEPFIF_01912 4.84e-73 rplR - - J ko:K02881 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
PCBEPFIF_01913 3.73e-110 rpsE - - J ko:K02988 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
PCBEPFIF_01914 2.22e-34 rpmD - - J ko:K02907 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal protein L30
PCBEPFIF_01915 4.95e-93 rplO - - J ko:K02876 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds to the 23S rRNA
PCBEPFIF_01916 1.25e-301 secY - - U ko:K03076 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
PCBEPFIF_01917 3.7e-155 adk 2.7.4.3 - F ko:K00939 ko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000,ko04147 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
PCBEPFIF_01918 3.13e-46 infA - - J ko:K02518 - ko00000,ko03012 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
PCBEPFIF_01919 1.89e-21 rpmJ - - J ko:K02919 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL36 family
PCBEPFIF_01920 2.07e-73 rpsM - - J ko:K02952 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
PCBEPFIF_01921 3.82e-82 rpsK - - J ko:K02948 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
PCBEPFIF_01922 1.48e-217 rpoA 2.7.7.6 - K ko:K03040 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PCBEPFIF_01923 2.23e-80 rplQ - - J ko:K02879 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal protein L17
PCBEPFIF_01924 1.02e-198 ecfA1 - - P ko:K16786 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PCBEPFIF_01925 6.7e-203 ecfA2 - - P ko:K16787 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PCBEPFIF_01926 1.08e-175 ecfT - - U ko:K16785 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PCBEPFIF_01927 5.08e-193 truA 5.4.99.12 - J ko:K06173 - ko00000,ko01000,ko03016 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
PCBEPFIF_01928 3.22e-103 rplM - - J ko:K02871 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
PCBEPFIF_01929 1.18e-86 rpsI - - J ko:K02996 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the universal ribosomal protein uS9 family
PCBEPFIF_01930 1.4e-205 - - - M - - - Belongs to the glycosyl hydrolase 28 family
PCBEPFIF_01931 7.57e-103 - - - K - - - Acetyltransferase (GNAT) domain
PCBEPFIF_01932 1.94e-136 - 3.5.1.124 - S ko:K03152 - ko00000,ko01000,ko01002 DJ-1/PfpI family
PCBEPFIF_01933 2.7e-153 - 3.8.1.2 - S ko:K01560 ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120 ko00000,ko00001,ko01000 Haloacid dehalogenase-like hydrolase
PCBEPFIF_01934 1.81e-172 - - - S ko:K07090 - ko00000 membrane transporter protein
PCBEPFIF_01935 2.7e-161 - - - G - - - Belongs to the phosphoglycerate mutase family
PCBEPFIF_01936 5.08e-207 - - - P ko:K16264 - ko00000,ko02000 cation diffusion facilitator family transporter
PCBEPFIF_01937 2.42e-33 - - - - - - - -
PCBEPFIF_01938 9.82e-164 gpmA1 5.4.2.11 - G ko:K01834 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PCBEPFIF_01939 1.99e-235 - - - S - - - AAA domain
PCBEPFIF_01940 0.0 pepC 3.4.22.40 - E ko:K01372 - ko00000,ko01000,ko01002 Peptidase C1-like family
PCBEPFIF_01941 1.91e-70 - - - - - - - -
PCBEPFIF_01942 5.22e-131 dut 3.6.1.23 - F ko:K01520 ko00240,ko00983,ko01100,map00240,map00983,map01100 ko00000,ko00001,ko00002,ko01000,ko03400 dUTP diphosphatase
PCBEPFIF_01943 0.0 radA - - O ko:K04485 - ko00000,ko03400 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
PCBEPFIF_01944 0.0 gltX 6.1.1.24 - J ko:K09698 ko00970,ko01100,map00970,map01100 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
PCBEPFIF_01945 0.0 cysS 6.1.1.16 - J ko:K01883 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the class-I aminoacyl-tRNA synthetase family
PCBEPFIF_01946 1.26e-100 mrnC - - J ko:K11145 - ko00000,ko01000,ko03009 Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
PCBEPFIF_01947 2.69e-178 trmH 2.1.1.185 - J ko:K03218 - ko00000,ko01000,ko03009 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PCBEPFIF_01948 3.81e-123 comX - - K ko:K03088,ko:K03091,ko:K12296 ko02020,ko02024,map02020,map02024 ko00000,ko00001,ko03000,ko03021 Belongs to the sigma-70 factor family
PCBEPFIF_01949 1.19e-45 - - - - - - - -
PCBEPFIF_01950 0.0 gntK 2.7.1.12 - G ko:K00851 ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko01000 Belongs to the FGGY kinase family
PCBEPFIF_01951 0.0 dxs 2.2.1.7 - H ko:K01662 ko00730,ko00900,ko01100,ko01110,ko01130,map00730,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
PCBEPFIF_01952 2.16e-32 secE - - U ko:K03073 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
PCBEPFIF_01953 5e-130 nusG - - K ko:K02601 - ko00000,ko03009,ko03021 Participates in transcription elongation, termination and antitermination
PCBEPFIF_01954 2.69e-90 rplK - - J ko:K02867 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
PCBEPFIF_01955 1.05e-160 rplA - - J ko:K02863 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
PCBEPFIF_01956 9.47e-202 pstS - - P ko:K02040 ko02010,ko02020,ko05152,map02010,map02020,map05152 ko00000,ko00001,ko00002,ko02000 Phosphate
PCBEPFIF_01957 1.19e-212 pstC - - P ko:K02037 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 probably responsible for the translocation of the substrate across the membrane
PCBEPFIF_01958 1.82e-198 pstA - - P ko:K02038 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Phosphate transport system permease protein PstA
PCBEPFIF_01959 5.24e-187 pstB2 3.6.3.27 - P ko:K02036 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PCBEPFIF_01960 5.44e-178 pstB1 3.6.3.27 - P ko:K02036 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PCBEPFIF_01961 5e-152 phoU - - P ko:K02039 - ko00000 Plays a role in the regulation of phosphate uptake
PCBEPFIF_01962 6.93e-79 - - - L - - - An automated process has identified a potential problem with this gene model
PCBEPFIF_01963 4.33e-193 - - - S - - - Protein of unknown function (DUF2785)
PCBEPFIF_01964 1.29e-64 - - - S - - - MazG-like family
PCBEPFIF_01965 6.8e-86 - - - - - - - -
PCBEPFIF_01966 6.5e-150 glsA 3.5.1.2 - E ko:K01425 ko00220,ko00250,ko00471,ko01100,ko04724,ko04727,ko04964,ko05206,ko05230,map00220,map00250,map00471,map01100,map04724,map04727,map04964,map05206,map05230 ko00000,ko00001,ko01000 Belongs to the glutaminase family
PCBEPFIF_01967 0.0 - - - - - - - -
PCBEPFIF_01968 1.15e-162 - - - L ko:K07496 - ko00000 transposase, IS605 OrfB family
PCBEPFIF_01969 3.36e-11 cas2 - - L ko:K09951 - ko00000,ko02048 CRISPR-associated protein (Cas_Cas2CT1978)
PCBEPFIF_01970 5.45e-178 cas2 - - L ko:K09951 - ko00000,ko02048 CRISPR-associated protein (Cas_Cas2CT1978)
PCBEPFIF_01971 1.17e-220 cas1 - - L ko:K15342 - ko00000,ko02048,ko03400 CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
PCBEPFIF_01972 5.71e-159 casE - - S ko:K19126 - ko00000,ko02048 CRISPR_assoc
PCBEPFIF_01973 3.68e-171 casD - - S ko:K19125 - ko00000,ko02048 CRISPR-associated protein (Cas_Cas5)
PCBEPFIF_01974 2.91e-255 casC - - L ko:K19124 - ko00000,ko02048 CT1975-like protein
PCBEPFIF_01975 3.74e-142 - - - S ko:K19046 - ko00000,ko02048 CRISPR-associated protein Cse2 (CRISPR_cse2)
PCBEPFIF_01976 0.0 casA - - L ko:K19123 - ko00000,ko02048 the current gene model (or a revised gene model) may contain a frame shift
PCBEPFIF_01977 0.0 cas3 - - L ko:K07012 - ko00000,ko01000,ko02048 CRISPR-associated helicase cas3
PCBEPFIF_01978 1.6e-58 - - - - - - - -
PCBEPFIF_01980 2.18e-96 tnpA1 - - L - - - PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
PCBEPFIF_01982 6.41e-148 fnr - - K ko:K21562 - ko00000,ko03000 Transcriptional regulator, Crp Fnr family
PCBEPFIF_01983 4.64e-124 dpsB - - P - - - Belongs to the Dps family
PCBEPFIF_01984 5.51e-46 - - - C - - - Heavy-metal-associated domain
PCBEPFIF_01985 0.0 cadA 3.6.3.3, 3.6.3.5 - P ko:K01534 - ko00000,ko01000 E1-E2 ATPase
PCBEPFIF_01986 6.18e-105 - - - - - - - -
PCBEPFIF_01987 5.41e-53 - - - S - - - Bacteriocin (Lactococcin_972)
PCBEPFIF_01989 3.72e-111 rplJ - - J ko:K02864 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
PCBEPFIF_01990 1.61e-72 rplL - - J ko:K02935 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
PCBEPFIF_01991 7e-35 - - - K ko:K09017 - ko00000,ko03000 Transcriptional regulator
PCBEPFIF_01992 0.0 - - - M ko:K01992 - ko00000,ko00002,ko02000 Exporter of polyketide antibiotics
PCBEPFIF_01993 7.77e-207 ybhF_1 - - V ko:K01990 - ko00000,ko00002,ko02000 ABC transporter
PCBEPFIF_01994 3.45e-100 - - - K - - - Bacterial regulatory proteins, tetR family
PCBEPFIF_01995 5.25e-145 - - - V ko:K01992 - ko00000,ko00002,ko02000 Transport permease protein
PCBEPFIF_01996 2.49e-82 - - - - - - - -
PCBEPFIF_01997 5.81e-49 - 1.1.1.29 - CH ko:K00018 ko00260,ko00630,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,map00260,map00630,map00680,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PCBEPFIF_01998 3.57e-38 - - - L - - - Putative transposase of IS4/5 family (DUF4096)
PCBEPFIF_01999 5.48e-214 - - - E ko:K20265 ko02024,map02024 ko00000,ko00001,ko02000 amino acid
PCBEPFIF_02000 2.08e-203 xth 3.1.11.2 - L ko:K01142 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 exodeoxyribonuclease III
PCBEPFIF_02002 1.44e-07 - - - S - - - YSIRK type signal peptide
PCBEPFIF_02003 1.59e-245 ldhA 1.1.1.28 - C ko:K03778,ko:K18347 ko00620,ko01120,ko01502,ko02020,map00620,map01120,map01502,map02020 ko00000,ko00001,ko00002,ko01000,ko01504 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PCBEPFIF_02004 2.37e-176 - - - EGP - - - Major Facilitator Superfamily
PCBEPFIF_02006 5.22e-17 - - - - - - - -
PCBEPFIF_02007 1.45e-31 - - - - - - - -
PCBEPFIF_02008 2.49e-189 - 3.1.3.102, 3.1.3.104 - S ko:K20861 ko00740,ko01100,ko01110,map00740,map01100,map01110 ko00000,ko00001,ko00002,ko01000 haloacid dehalogenase-like hydrolase
PCBEPFIF_02009 0.0 fusA1 - - J - - - elongation factor G
PCBEPFIF_02010 2.51e-200 yvgN - - C - - - Aldo keto reductase
PCBEPFIF_02011 9.01e-196 - - - P ko:K03284 - ko00000,ko02000 CorA-like Mg2+ transporter protein
PCBEPFIF_02012 2.41e-173 ysaA 3.1.3.5, 3.8.1.2 - S ko:K01560,ko:K07025,ko:K08723 ko00230,ko00240,ko00361,ko00625,ko00760,ko01100,ko01110,ko01120,map00230,map00240,map00361,map00625,map00760,map01100,map01110,map01120 ko00000,ko00001,ko01000 Haloacid dehalogenase-like hydrolase
PCBEPFIF_02013 4.49e-191 - - - K - - - Helix-turn-helix domain
PCBEPFIF_02014 0.0 - - - V ko:K06148 - ko00000,ko02000 ABC-type multidrug transport system, ATPase and permease components
PCBEPFIF_02015 4.73e-99 - - - - - - - -
PCBEPFIF_02016 5.23e-311 - - - L - - - Plasmid pRiA4b ORF-3-like protein
PCBEPFIF_02017 2.99e-114 tpx 1.11.1.15 - O ko:K11065 - ko00000,ko01000 Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
PCBEPFIF_02018 1.09e-74 - - - - - - - -
PCBEPFIF_02019 6.85e-127 - - - V ko:K02003 - ko00000,ko00002,ko02000 ABC transporter
PCBEPFIF_02020 1.94e-135 galR - - K ko:K02529 - ko00000,ko03000 Transcriptional regulator

eggNOG-mapper v2.1.12 (Database: eggNOG v5.0.2, Mar. 2021 release)