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ORF_ID	e_value	Gene_name	EC_number	CAZy	COGs	KEGG_ko	KEGG_Pathway	BRITE	Description
JMALFHDP_00002	7.45e-298	cycA	-	-	E	ko:K03293,ko:K11737	-	ko00000,ko02000	Amino acid permease
JMALFHDP_00003	0.0	adhE	1.1.1.1, 1.2.1.10	-	C	ko:K04072	ko00010,ko00071,ko00350,ko00620,ko00625,ko00626,ko00650,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00620,map00625,map00626,map00650,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	belongs to the iron- containing alcohol dehydrogenase family
JMALFHDP_00004	1.92e-14	-	-	-	-	-	-	-	-
JMALFHDP_00005	7.34e-133	-	4.1.1.44	-	S	ko:K01607	ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220	ko00000,ko00001,ko01000	Carboxymuconolactone decarboxylase family
JMALFHDP_00006	0.0	-	-	-	S	-	-	-	TerB-C domain
JMALFHDP_00007	0.0	-	-	-	P	-	-	-	P-loop Domain of unknown function (DUF2791)
JMALFHDP_00008	0.0	-	-	-	L	ko:K03724	-	ko00000,ko01000,ko03400	DEAD DEAH box helicase
JMALFHDP_00009	5.12e-243	galE	5.1.3.2	-	M	ko:K01784	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the NAD(P)-dependent epimerase dehydratase family
JMALFHDP_00010	8.02e-311	-	1.8.1.7	-	C	ko:K00383,ko:K21739	ko00480,ko04918,map00480,map04918	ko00000,ko00001,ko01000	Pyridine nucleotide-disulfide oxidoreductase
JMALFHDP_00011	4.72e-205	yvgN	-	-	C	-	-	-	Aldo keto reductase
JMALFHDP_00013	1.03e-102	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
JMALFHDP_00014	6.23e-45	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
JMALFHDP_00015	2.31e-42	bglG1	-	-	K	ko:K03488	-	ko00000,ko03000	CAT RNA binding domain
JMALFHDP_00016	5.93e-242	-	-	-	G	ko:K02755,ko:K02756,ko:K02757	ko02060,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Psort location CytoplasmicMembrane, score 10.00
JMALFHDP_00017	1.28e-222	ascB	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
JMALFHDP_00018	4.6e-99	-	-	-	K	-	-	-	acetyltransferase
JMALFHDP_00019	1.11e-151	-	-	-	S	-	-	-	Putative ABC-transporter type IV
JMALFHDP_00020	1.03e-171	-	-	-	M	-	-	-	LysM domain protein
JMALFHDP_00021	2.45e-156	-	-	-	M	-	-	-	LysM domain protein
JMALFHDP_00023	5.51e-44	-	-	-	S	-	-	-	Bacterial protein of unknown function (DUF898)
JMALFHDP_00024	9.18e-242	XK27_10475	-	-	S	-	-	-	Oxidoreductase family, NAD-binding Rossmann fold
JMALFHDP_00025	1e-70	rpiA1	5.3.1.6	-	G	ko:K01807	ko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
JMALFHDP_00026	1.43e-187	-	-	-	K	-	-	-	SIS domain
JMALFHDP_00027	5.98e-212	-	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	lactate/malate dehydrogenase, alpha/beta C-terminal domain
JMALFHDP_00030	1.44e-69	XK27_05625	-	-	P	-	-	-	Rhodanese Homology Domain
JMALFHDP_00031	2.15e-246	-	-	-	-	-	-	-	-
JMALFHDP_00032	6.31e-159	gntR1	-	-	K	ko:K03710	-	ko00000,ko03000	UTRA
JMALFHDP_00033	1.34e-86	tagD	2.7.7.39	-	IM	ko:K00980	ko00564,map00564	ko00000,ko00001,ko01000	Glycerol-3-phosphate cytidylyltransferase
JMALFHDP_00034	1.18e-169	tagA	2.4.1.187	GT26	F	ko:K05946	ko05111,map05111	ko00000,ko00001,ko01000,ko01003	Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
JMALFHDP_00035	6.88e-257	-	-	-	M	-	-	-	Glycosyl transferases group 1
JMALFHDP_00036	0.0	-	-	-	M	-	-	-	Glycosyltransferase like family 2
JMALFHDP_00037	0.0	pncB	6.3.4.21	-	F	ko:K00763	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
JMALFHDP_00038	1.02e-195	nadE	6.3.1.5	-	F	ko:K01916	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
JMALFHDP_00039	0.0	pacL	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	P-type ATPase
JMALFHDP_00040	0.0	-	-	-	V	-	-	-	ABC transporter transmembrane region
JMALFHDP_00041	1.68e-185	-	-	-	-	-	-	-	-
JMALFHDP_00042	2e-289	-	-	-	M	-	-	-	CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
JMALFHDP_00043	0.0	epsU	-	-	S	ko:K03328	-	ko00000	Polysaccharide biosynthesis protein
JMALFHDP_00044	2.82e-171	-	-	-	M	-	-	-	Glycosyltransferase sugar-binding region containing DXD motif
JMALFHDP_00045	6.72e-111	ydcK	-	-	S	ko:K03095	-	ko00000	Belongs to the SprT family
JMALFHDP_00047	7.24e-130	-	-	-	S	-	-	-	ECF transporter, substrate-specific component
JMALFHDP_00048	8.8e-149	acmA	3.2.1.17, 3.2.1.96	-	NU	ko:K01185,ko:K01227	ko00511,map00511	ko00000,ko00001,ko01000	mannosyl-glycoprotein
JMALFHDP_00049	0.0	pcrA	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	ATP-dependent DNA helicase
JMALFHDP_00050	0.0	ligA	6.5.1.2	-	L	ko:K01972	ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430	ko00000,ko00001,ko01000,ko03032,ko03400	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
JMALFHDP_00051	1.09e-263	camS	-	-	S	-	-	-	sex pheromone
JMALFHDP_00052	1.29e-64	gatC	6.3.5.6, 6.3.5.7	-	J	ko:K02435	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
JMALFHDP_00053	0.0	gatA	6.3.5.6, 6.3.5.7	-	J	ko:K02433	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
JMALFHDP_00054	0.0	gatB	6.3.5.6, 6.3.5.7	-	J	ko:K02434	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
JMALFHDP_00055	1.86e-215	dagK	2.7.1.107	-	G	ko:K07029	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko01000	Lipid kinase
JMALFHDP_00057	6.15e-194	-	-	-	S	-	-	-	hydrolase
JMALFHDP_00058	1.66e-124	-	-	-	L	ko:K07497	-	ko00000	hmm pf00665
JMALFHDP_00059	1.09e-42	-	-	-	L	ko:K07497	-	ko00000	hmm pf00665
JMALFHDP_00060	4.38e-164	-	-	-	L	-	-	-	Helix-turn-helix domain
JMALFHDP_00061	2.4e-120	-	-	-	S	-	-	-	Cob(I)alamin adenosyltransferase
JMALFHDP_00062	1.19e-113	-	-	-	S	ko:K16927	-	ko00000,ko00002,ko02000	ECF transporter, substrate-specific component
JMALFHDP_00063	6.37e-85	-	-	-	S	-	-	-	Domain of unknown function (DUF4430)
JMALFHDP_00064	6.81e-189	rtpR	1.17.4.2	-	F	ko:K00527	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000	ribonucleoside-triphosphate reductase activity
JMALFHDP_00065	0.0	rtpR	1.17.4.2	-	F	ko:K00527	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000	ribonucleoside-triphosphate reductase activity
JMALFHDP_00066	3.27e-153	ybhL	-	-	S	ko:K06890	-	ko00000	Belongs to the BI1 family
JMALFHDP_00067	7.9e-183	cbiQ	-	-	P	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	cobalt transport
JMALFHDP_00068	0.0	ykoD	-	-	P	ko:K16786,ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
JMALFHDP_00069	1.8e-123	-	-	-	S	ko:K16924	-	ko00000,ko00002,ko02000	UPF0397 protein
JMALFHDP_00070	5.54e-209	XK27_10120	-	-	K	-	-	-	S-adenosyl-l-methionine hydroxide adenosyltransferase
JMALFHDP_00071	2.03e-307	nhaC	-	-	C	ko:K03315	-	ko00000,ko02000	Na H antiporter NhaC
JMALFHDP_00072	3.14e-164	spaF	-	-	V	ko:K01990,ko:K20490	ko02010,ko02020,ko02024,map02010,map02020,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, ATP-binding protein
JMALFHDP_00073	2.58e-155	-	-	-	S	ko:K01992,ko:K20491	ko02010,ko02020,ko02024,map02010,map02020,map02024	ko00000,ko00001,ko00002,ko02000	ABC-2 family transporter protein
JMALFHDP_00074	0.0	rumA_2	2.1.1.190	-	J	ko:K03215	-	ko00000,ko01000,ko03009	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
JMALFHDP_00075	0.0	hsdM	2.1.1.72	-	V	ko:K03427	-	ko00000,ko01000,ko02048	type I restriction-modification system
JMALFHDP_00076	4.8e-66	-	3.1.21.3	-	V	ko:K01154	-	ko00000,ko01000,ko02048	Type I restriction modification DNA specificity domain
JMALFHDP_00077	1.17e-77	-	3.1.21.3	-	V	ko:K01154	-	ko00000,ko01000,ko02048	Type I restriction modification DNA specificity domain
JMALFHDP_00078	0.0	hsdR	3.1.21.3	-	V	ko:K01153	-	ko00000,ko01000,ko02048	Subunit R is required for both nuclease and ATPase activities, but not for modification
JMALFHDP_00079	2.16e-244	flp	-	-	V	-	-	-	Beta-lactamase
JMALFHDP_00082	1.77e-120	-	-	-	L	-	-	-	NUDIX domain
JMALFHDP_00083	2.78e-85	-	-	-	-	-	-	-	-
JMALFHDP_00084	0.0	polYB	2.7.7.7	-	L	ko:K02346,ko:K03502	-	ko00000,ko01000,ko03400	Belongs to the DNA polymerase type-Y family
JMALFHDP_00086	2.62e-160	rluA	5.4.99.23, 5.4.99.28, 5.4.99.29	-	J	ko:K06177,ko:K06180	-	ko00000,ko01000,ko03009,ko03016	Responsible for synthesis of pseudouridine from uracil
JMALFHDP_00087	8.3e-31	rluA	5.4.99.23, 5.4.99.28, 5.4.99.29	-	J	ko:K06177,ko:K06180	-	ko00000,ko01000,ko03009,ko03016	Responsible for synthesis of pseudouridine from uracil
JMALFHDP_00088	0.0	pbp2A	2.4.1.129, 3.4.16.4	GT51	M	ko:K12555	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01003,ko01011	penicillin-binding protein
JMALFHDP_00089	3.16e-73	yheA	-	-	S	-	-	-	Belongs to the UPF0342 family
JMALFHDP_00090	2.36e-287	yhaO	-	-	L	ko:K03547	-	ko00000,ko03400	Ser Thr phosphatase family protein
JMALFHDP_00091	0.0	yhaN	-	-	L	-	-	-	AAA domain
JMALFHDP_00092	7.52e-238	yhaM	-	-	S	ko:K03698	-	ko00000,ko01000,ko03019	Metal dependent phosphohydrolases with conserved 'HD' motif.
JMALFHDP_00093	1.02e-201	prsA	5.2.1.8	-	M	ko:K07533	-	ko00000,ko01000,ko03110	Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
JMALFHDP_00094	1.81e-42	-	-	-	S	-	-	-	YtxH-like protein
JMALFHDP_00095	7.43e-89	-	-	-	-	-	-	-	-
JMALFHDP_00096	2.03e-100	hit	-	-	FG	ko:K02503	-	ko00000,ko04147	Scavenger mRNA decapping enzyme C-term binding
JMALFHDP_00097	8.6e-169	ecsA	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
JMALFHDP_00098	6.01e-288	ecsB	-	-	U	ko:K01992	-	ko00000,ko00002,ko02000	ABC transporter
JMALFHDP_00099	2.62e-159	trmB	2.1.1.33	-	J	ko:K03439	-	ko00000,ko01000,ko03016	Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
JMALFHDP_00100	2.63e-86	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
JMALFHDP_00101	2.63e-69	ytpP	-	-	CO	-	-	-	Thioredoxin
JMALFHDP_00102	3.58e-156	XK27_10290	-	-	J	ko:K06878	-	ko00000	Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
JMALFHDP_00103	1.04e-164	-	-	-	K	ko:K03710	-	ko00000,ko03000	UTRA
JMALFHDP_00104	0.0	-	-	-	E	-	-	-	Peptidase family M20/M25/M40
JMALFHDP_00105	8.69e-227	asnA2	3.5.1.1	-	E	ko:K01424	ko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110	ko00000,ko00001,ko01000	Asparaginase
JMALFHDP_00106	2.41e-118	-	-	-	S	-	-	-	Glycine/sarcosine/betaine reductase selenoprotein B (GRDB)
JMALFHDP_00107	1.75e-249	-	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
JMALFHDP_00108	1.7e-149	cutC	-	-	P	ko:K06201	-	ko00000	Participates in the control of copper homeostasis
JMALFHDP_00110	0.0	murC	6.3.2.8	-	M	ko:K01924	ko00471,ko00550,ko01100,map00471,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Belongs to the MurCDEF family
JMALFHDP_00111	1.58e-124	frlR1	-	-	K	ko:K03710,ko:K10711	-	ko00000,ko03000	UTRA
JMALFHDP_00112	1.18e-132	deoC	4.1.2.4	-	F	ko:K01619	ko00030,map00030	ko00000,ko00001,ko01000	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
JMALFHDP_00113	8.15e-13	deoC	4.1.2.4	-	F	ko:K01619	ko00030,map00030	ko00000,ko00001,ko01000	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
JMALFHDP_00114	9.82e-239	-	-	-	G	ko:K02027	-	ko00000,ko00002,ko02000	Bacterial extracellular solute-binding protein
JMALFHDP_00115	2.87e-146	vraR	-	-	K	ko:K07694,ko:K11618	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	helix_turn_helix, Lux Regulon
JMALFHDP_00116	1.33e-228	degS	2.7.13.3	-	F	ko:K07683,ko:K07777	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Sensor histidine kinase
JMALFHDP_00117	2e-187	rbsB	-	-	G	ko:K10439	ko02010,ko02030,map02010,map02030	ko00000,ko00001,ko00002,ko02000	Periplasmic binding protein domain
JMALFHDP_00118	9.92e-89	-	-	-	G	ko:K02744	ko00052,ko02060,map00052,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system fructose IIA component
JMALFHDP_00119	5.35e-123	levB	2.7.1.191	-	G	ko:K02794	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system sorbose subfamily IIB component
JMALFHDP_00120	1.25e-182	levC	-	-	M	ko:K02795	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	PTS system sorbose-specific iic component
JMALFHDP_00121	1.14e-192	levD	-	-	G	ko:K02771	ko00051,ko02060,map00051,map02060	ko00000,ko00001,ko00002,ko02000	PTS system mannose/fructose/sorbose family IID component
JMALFHDP_00122	8.34e-62	-	-	-	-	-	-	-	-
JMALFHDP_00123	1.57e-84	-	-	-	K	-	-	-	Transcriptional regulator
JMALFHDP_00124	2.91e-173	-	-	-	EGP	-	-	-	Major Facilitator
JMALFHDP_00125	8.65e-67	-	-	-	EGP	-	-	-	Major Facilitator
JMALFHDP_00126	2.36e-289	dpaL	4.3.1.15	-	E	ko:K01751	-	ko00000,ko01000	Pyridoxal-phosphate dependent enzyme
JMALFHDP_00127	0.0	polA	2.7.7.7	-	L	ko:K02335	ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440	ko00000,ko00001,ko01000,ko03032,ko03400	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
JMALFHDP_00128	4.73e-205	fpg	3.2.2.23, 4.2.99.18	-	L	ko:K10563	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
JMALFHDP_00129	1.71e-132	coaE	2.7.1.24	-	F	ko:K00859	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
JMALFHDP_00130	5.92e-107	nrdR	-	-	K	ko:K07738	-	ko00000,ko03000	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
JMALFHDP_00131	1.5e-312	dnaB2	-	-	L	ko:K03346	-	ko00000,ko03032	Replication initiation and membrane attachment
JMALFHDP_00132	2.94e-206	dnaI	-	-	L	ko:K11144	-	ko00000,ko03032	Primosomal protein DnaI
JMALFHDP_00133	0.0	thrS	6.1.1.3	-	J	ko:K01868	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
JMALFHDP_00134	1.29e-112	infC	-	-	J	ko:K02520	-	ko00000,ko03012,ko03029	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
JMALFHDP_00135	9.64e-38	rpmI	-	-	J	ko:K02916	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL35 family
JMALFHDP_00136	2.05e-74	rplT	-	-	J	ko:K02887	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
JMALFHDP_00137	1.31e-242	add	3.5.4.2, 3.5.4.4	-	F	ko:K01488,ko:K02029,ko:K21053	ko00230,ko01100,ko05340,map00230,map01100,map05340	ko00000,ko00001,ko00002,ko01000,ko02000	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
JMALFHDP_00138	1.7e-117	yqeG	-	-	S	ko:K07015	-	ko00000	HAD phosphatase, family IIIA
JMALFHDP_00139	2.17e-266	yqeH	-	-	S	ko:K06948	-	ko00000,ko03009	Ribosome biogenesis GTPase YqeH
JMALFHDP_00140	1.65e-153	nadD	2.7.7.18	-	H	ko:K00969	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
JMALFHDP_00141	1.86e-141	yqeK	-	-	H	-	-	-	Hydrolase, HD family
JMALFHDP_00142	1.78e-77	rsfS	-	-	J	ko:K09710	-	ko00000,ko03009	Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
JMALFHDP_00143	1.62e-276	ylbM	-	-	S	-	-	-	Belongs to the UPF0348 family
JMALFHDP_00144	7.11e-124	ylbN	-	-	S	ko:K07040	-	ko00000	Uncharacterized ACR, COG1399
JMALFHDP_00145	3.11e-169	csrR	-	-	K	-	-	-	response regulator
JMALFHDP_00146	0.0	arlS	2.7.13.3	-	T	ko:K18940	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
JMALFHDP_00147	3.7e-214	yidC	-	-	U	ko:K03217	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044,ko03029	Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
JMALFHDP_00148	1.94e-55	acyP	3.6.1.7	-	C	ko:K01512	ko00620,ko00627,ko01120,map00620,map00627,map01120	ko00000,ko00001,ko01000	Belongs to the acylphosphatase family
JMALFHDP_00149	3.02e-176	spoU	-	-	J	ko:K03437	-	ko00000,ko03016	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
JMALFHDP_00150	1.01e-83	yodB	-	-	K	-	-	-	Transcriptional regulator, HxlR family
JMALFHDP_00151	9.43e-260	pheS	6.1.1.20	-	J	ko:K01889	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
JMALFHDP_00152	0.0	pheT	6.1.1.20	-	J	ko:K01890	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
JMALFHDP_00153	1.11e-261	mltG	-	-	S	ko:K07082	-	ko00000	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
JMALFHDP_00154	5.34e-97	greA	-	-	K	ko:K03624	-	ko00000,ko03021	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
JMALFHDP_00155	0.0	-	-	-	S	-	-	-	membrane
JMALFHDP_00156	0.0	pbp2b	-	-	M	ko:K00687,ko:K12553,ko:K21465,ko:K21466	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01011	Penicillin-binding Protein
JMALFHDP_00157	3.09e-29	rpmG	-	-	J	ko:K02913	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL33 family
JMALFHDP_00158	1.17e-119	fthC	6.3.3.2	-	H	ko:K01934	ko00670,ko01100,map00670,map01100	ko00000,ko00001,ko01000	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
JMALFHDP_00159	9.32e-154	gluP	3.4.21.105	-	S	ko:K19225	-	ko00000,ko01000,ko01002	Rhomboid family
JMALFHDP_00160	1.64e-47	yqgQ	-	-	S	-	-	-	Bacterial protein of unknown function (DUF910)
JMALFHDP_00161	1.47e-76	yqhL	-	-	P	-	-	-	Rhodanese-like protein
JMALFHDP_00162	1.18e-26	-	-	-	S	-	-	-	Protein of unknown function (DUF3042)
JMALFHDP_00163	7.53e-213	miaA	2.5.1.75	-	F	ko:K00791	ko00908,ko01100,ko01110,map00908,map01100,map01110	ko00000,ko00001,ko01000,ko01006,ko03016	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
JMALFHDP_00164	0.0	glnA	6.3.1.2	-	E	ko:K01915	ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727	ko00000,ko00001,ko01000,ko04147	glutamine synthetase
JMALFHDP_00165	1.34e-261	-	-	-	EGP	-	-	-	Major Facilitator Superfamily
JMALFHDP_00166	6.93e-195	supH	-	-	S	-	-	-	haloacid dehalogenase-like hydrolase
JMALFHDP_00168	1.75e-226	ybcH	-	-	D	ko:K06889	-	ko00000	Alpha beta
JMALFHDP_00169	1.38e-274	atoB	1.1.1.88, 2.3.1.9	-	I	ko:K00054,ko:K00626	ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the thiolase family
JMALFHDP_00170	4.57e-280	mvaA	1.1.1.88, 2.3.1.9	-	C	ko:K00054,ko:K00626	ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the HMG-CoA reductase family
JMALFHDP_00171	6.89e-279	mvaS	2.3.3.10	-	I	ko:K01641	ko00072,ko00280,ko00650,ko00900,ko01100,ko01110,ko01130,map00072,map00280,map00650,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Hydroxymethylglutaryl-CoA synthase
JMALFHDP_00172	0.0	rumA_1	2.1.1.190, 2.1.1.35	-	J	ko:K00557,ko:K03215	-	ko00000,ko01000,ko03009,ko03016	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
JMALFHDP_00173	1.01e-183	recX	-	-	S	ko:K03565	-	ko00000,ko03400	Regulatory protein RecX
JMALFHDP_00174	6.36e-147	ygaC	-	-	J	ko:K07586	-	ko00000	Belongs to the UPF0374 family
JMALFHDP_00175	4.08e-117	-	-	-	-	-	-	-	-
JMALFHDP_00176	8.42e-102	-	-	-	-	-	-	-	-
JMALFHDP_00177	2.71e-201	hlyX	-	-	S	ko:K03699	-	ko00000,ko02042	Transporter associated domain
JMALFHDP_00178	0.0	prfC	-	-	J	ko:K02837	-	ko00000,ko03012	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
JMALFHDP_00179	2.17e-59	XK27_09445	-	-	S	-	-	-	Domain of unknown function (DUF1827)
JMALFHDP_00180	0.0	clpE	-	-	O	ko:K03697	-	ko00000,ko03110	Belongs to the ClpA ClpB family
JMALFHDP_00181	4.33e-36	-	-	-	-	-	-	-	-
JMALFHDP_00182	7.45e-54	ptsH	-	-	G	ko:K11189	-	ko00000,ko02000	phosphocarrier protein HPR
JMALFHDP_00183	0.0	ptsI	2.7.3.9	-	G	ko:K08483	ko02060,map02060	ko00000,ko00001,ko01000,ko02000	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
JMALFHDP_00184	1e-88	spxA	-	-	K	ko:K16509	-	ko00000	Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
JMALFHDP_00185	2.82e-154	mecA	-	-	NOT	ko:K16511	-	ko00000	Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
JMALFHDP_00186	3.89e-206	coiA	-	-	S	ko:K06198	-	ko00000	Competence protein
JMALFHDP_00187	2.2e-139	yjbH	-	-	Q	-	-	-	Thioredoxin
JMALFHDP_00188	2.15e-144	-	-	-	S	-	-	-	CYTH
JMALFHDP_00189	1.7e-146	yjbM	2.7.6.5	-	S	ko:K07816	ko00230,map00230	ko00000,ko00001,ko01000	RelA SpoT domain protein
JMALFHDP_00190	2.24e-194	nadK	2.7.1.23	-	F	ko:K00858	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
JMALFHDP_00191	2.66e-218	rluD2	5.4.99.23	-	J	ko:K06180	-	ko00000,ko01000,ko03009	Responsible for synthesis of pseudouridine from uracil
JMALFHDP_00192	0.0	mycA	4.2.1.53	-	S	ko:K10254	-	ko00000,ko01000	Myosin-crossreactive antigen
JMALFHDP_00193	2.59e-298	-	-	-	N	ko:K09384	-	ko00000	Uncharacterized conserved protein (DUF2075)
JMALFHDP_00194	1.44e-254	pgl	3.1.1.31	-	G	ko:K07404	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Lactonase, 7-bladed beta-propeller
JMALFHDP_00195	4.44e-87	srlB	2.7.1.198	-	G	ko:K02781	ko00051,ko02060,map00051,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system glucitol/sorbitol-specific IIA component
JMALFHDP_00196	6.26e-269	XK27_05220	-	-	S	-	-	-	AI-2E family transporter
JMALFHDP_00197	1.88e-135	cspR	2.1.1.207	-	J	ko:K03216	-	ko00000,ko01000,ko03016	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
JMALFHDP_00198	8.29e-100	-	-	-	S	-	-	-	Protein of unknown function (DUF1149)
JMALFHDP_00199	0.0	ftsK	-	-	D	ko:K03466	-	ko00000,ko03036	Belongs to the FtsK SpoIIIE SftA family
JMALFHDP_00200	4.27e-293	ymfF	-	-	S	-	-	-	Peptidase M16 inactive domain protein
JMALFHDP_00201	2.58e-296	ymfH	-	-	S	-	-	-	Peptidase M16
JMALFHDP_00202	8.62e-166	fabG	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Enoyl-(Acyl carrier protein) reductase
JMALFHDP_00203	8.01e-170	ymfM	-	-	S	ko:K15539	-	ko00000	Helix-turn-helix domain
JMALFHDP_00204	1.8e-124	pgsA	2.7.8.5	-	I	ko:K00995	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
JMALFHDP_00205	1.73e-249	recA	-	-	L	ko:K03553	ko03440,map03440	ko00000,ko00001,ko00002,ko03400	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
JMALFHDP_00206	9.25e-311	rny	-	-	S	ko:K18682	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	Endoribonuclease that initiates mRNA decay
JMALFHDP_00207	9.48e-262	tagO	2.7.8.33, 2.7.8.35	-	M	ko:K02851	-	ko00000,ko01000,ko01003,ko01005	transferase
JMALFHDP_00208	1.39e-156	yvyE	3.4.13.9	-	S	ko:K01271	-	ko00000,ko01000,ko01002	YigZ family
JMALFHDP_00209	9.87e-302	comFA	-	-	L	ko:K02240	-	ko00000,ko00002,ko02044	Helicase C-terminal domain protein
JMALFHDP_00210	1.84e-162	comFC	-	-	S	ko:K02242	-	ko00000,ko00002,ko02044	Competence protein
JMALFHDP_00211	2.35e-125	hpf	-	-	J	ko:K05808	-	ko00000,ko03009	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
JMALFHDP_00212	0.0	secA	-	-	U	ko:K03070	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
JMALFHDP_00213	8.75e-236	prfB	-	-	J	ko:K02836	-	ko00000,ko03012	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
JMALFHDP_00214	3.75e-49	-	-	-	-	-	-	-	-
JMALFHDP_00215	1.01e-223	hprK	-	-	F	ko:K06023	-	ko00000,ko01000	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
JMALFHDP_00216	6.19e-202	lgt	-	-	M	ko:K13292	-	ko00000,ko01000	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
JMALFHDP_00217	1.54e-238	gpsA	1.1.1.94	-	I	ko:K00057	ko00564,ko01110,map00564,map01110	ko00000,ko00001,ko01000	Glycerol-3-phosphate dehydrogenase
JMALFHDP_00218	6.31e-223	trxB	1.8.1.9	-	C	ko:K00384	ko00450,map00450	ko00000,ko00001,ko01000	Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
JMALFHDP_00219	5.12e-243	galE	5.1.3.2	-	M	ko:K01784	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the NAD(P)-dependent epimerase dehydratase family
JMALFHDP_00220	1.68e-229	lacR	-	-	K	ko:K02529	-	ko00000,ko03000	Transcriptional regulator
JMALFHDP_00221	2.41e-284	galK	2.7.1.6	-	F	ko:K00849	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
JMALFHDP_00222	0.0	galT	2.7.7.12	-	G	ko:K00965	ko00052,ko00520,ko01100,ko04917,map00052,map00520,map01100,map04917	ko00000,ko00001,ko00002,ko01000	UDP-glucose--hexose-1-phosphate uridylyltransferase
JMALFHDP_00223	9.22e-245	galM	5.1.3.3	-	G	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the interconversion of alpha and beta anomers of maltose
JMALFHDP_00224	0.0	pgm	5.4.2.2	-	G	ko:K01835	ko00010,ko00030,ko00052,ko00230,ko00500,ko00520,ko00521,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00052,map00230,map00500,map00520,map00521,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
JMALFHDP_00225	0.0	uvrB	-	-	L	ko:K03702	ko03420,map03420	ko00000,ko00001,ko03400	damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
JMALFHDP_00226	0.0	uvrA	-	-	L	ko:K03701	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
JMALFHDP_00227	5.85e-117	-	-	-	S	-	-	-	Short repeat of unknown function (DUF308)
JMALFHDP_00228	3.19e-206	yvcJ	-	-	S	ko:K06958	-	ko00000,ko03019	Displays ATPase and GTPase activities
JMALFHDP_00229	1.88e-246	yvcK	-	-	S	-	-	-	Required for morphogenesis under gluconeogenic growth conditions
JMALFHDP_00230	1.66e-219	whiA	-	-	K	ko:K09762	-	ko00000	May be required for sporulation
JMALFHDP_00231	3.74e-130	clpP	3.4.21.92	-	O	ko:K01358	ko04112,ko04212,map04112,map04212	ko00000,ko00001,ko01000,ko01002	Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
JMALFHDP_00232	0.0	ycaM	-	-	E	-	-	-	amino acid
JMALFHDP_00234	2.15e-237	cggR	-	-	K	ko:K05311	-	ko00000,ko03000	Putative sugar-binding domain
JMALFHDP_00235	4.74e-243	gap	1.2.1.12	-	G	ko:K00134	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
JMALFHDP_00236	5.76e-286	pgk	2.7.2.3	-	F	ko:K00927	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the phosphoglycerate kinase family
JMALFHDP_00237	8.39e-182	tpiA	5.3.1.1	-	G	ko:K01803	ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
JMALFHDP_00238	1.18e-311	eno	4.2.1.11	-	G	ko:K01689	ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066	ko00000,ko00001,ko00002,ko01000,ko03019,ko04147	Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
JMALFHDP_00239	1.07e-39	secG	-	-	U	ko:K03075	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Preprotein translocase
JMALFHDP_00240	0.0	rnr	-	-	J	ko:K12573	ko03018,map03018	ko00000,ko00001,ko01000,ko03016,ko03019	3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
JMALFHDP_00241	2.08e-101	smpB	-	-	J	ko:K03664	-	ko00000	the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
JMALFHDP_00242	3.25e-137	-	-	-	K	ko:K06977	-	ko00000	acetyltransferase
JMALFHDP_00244	7.35e-134	-	-	-	-	-	-	-	-
JMALFHDP_00245	5.73e-120	-	-	-	-	-	-	-	-
JMALFHDP_00246	2.71e-200	ycsE	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
JMALFHDP_00247	7.98e-172	ung	3.2.2.27	-	L	ko:K03648	ko03410,ko05340,map03410,map05340	ko00000,ko00001,ko01000,ko03400	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
JMALFHDP_00248	2.13e-228	pta	2.3.1.8, 3.6.3.21	-	C	ko:K00625,ko:K02028	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000,ko02000	phosphate acetyltransferase
JMALFHDP_00249	1.01e-109	ydiB	-	-	O	ko:K06925	-	ko00000,ko03016	Hydrolase, P-loop family
JMALFHDP_00250	2.61e-128	dnaQ	2.7.7.7	-	L	ko:K02342	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III
JMALFHDP_00251	7.78e-208	murB	1.3.1.98	-	M	ko:K00075	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation
JMALFHDP_00252	1.2e-262	potA	3.6.3.30, 3.6.3.31	-	P	ko:K02010,ko:K11072	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
JMALFHDP_00253	1.22e-179	potB	-	-	P	ko:K11071	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
JMALFHDP_00254	6.24e-175	potC	-	-	P	ko:K11070	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
JMALFHDP_00255	4.71e-264	potD	-	-	P	ko:K11069	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
JMALFHDP_00256	1.29e-196	dacA	2.7.7.85	-	S	ko:K18672	-	ko00000,ko01000	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
JMALFHDP_00257	1.55e-224	ybbR	-	-	S	-	-	-	YbbR-like protein
JMALFHDP_00258	0.0	glmM	5.4.2.10	-	G	ko:K03431	ko00520,ko01100,ko01130,map00520,map01100,map01130	ko00000,ko00001,ko01000	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
JMALFHDP_00259	2.31e-188	-	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
JMALFHDP_00260	7.13e-87	crcB1	-	-	U	ko:K06199	-	ko00000,ko02000	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
JMALFHDP_00261	1.13e-81	crcB	-	-	U	ko:K06199	-	ko00000,ko02000	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
JMALFHDP_00262	1.2e-240	-	-	-	S	-	-	-	Putative adhesin
JMALFHDP_00263	1.71e-148	-	-	-	-	-	-	-	-
JMALFHDP_00264	1.98e-188	-	-	-	S	-	-	-	Alpha/beta hydrolase family
JMALFHDP_00265	2.74e-210	-	-	-	P	ko:K02077	-	ko00000,ko00002,ko02000	Belongs to the bacterial solute-binding protein 9 family
JMALFHDP_00266	7.6e-274	coaBC	4.1.1.36, 6.3.2.5	-	H	ko:K01598,ko:K13038	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
JMALFHDP_00267	1.11e-126	-	-	-	S	-	-	-	VanZ like family
JMALFHDP_00268	2.13e-171	yebC	-	-	K	-	-	-	Transcriptional regulatory protein
JMALFHDP_00269	2.06e-35	comGA	-	-	NU	ko:K02243	-	ko00000,ko00002,ko02044	Type II IV secretion system protein
JMALFHDP_00270	9.33e-177	comGA	-	-	NU	ko:K02243	-	ko00000,ko00002,ko02044	Type II IV secretion system protein
JMALFHDP_00271	1.93e-225	comGB	-	-	NU	ko:K02244	-	ko00000,ko00002,ko02044	type II secretion system
JMALFHDP_00272	8.18e-53	comGC	-	-	U	ko:K02245,ko:K02456	ko03070,ko05111,map03070,map05111	ko00000,ko00001,ko00002,ko02044	Required for transformation and DNA binding
JMALFHDP_00273	1.45e-88	-	-	-	-	ko:K02246	-	ko00000,ko00002,ko02044	-
JMALFHDP_00275	3.17e-113	-	-	-	U	ko:K02248	-	ko00000,ko00002,ko02044	Putative Competence protein ComGF
JMALFHDP_00276	1.71e-238	ytxK	2.1.1.72	-	L	ko:K00571	-	ko00000,ko01000,ko02048	N-6 DNA Methylase
JMALFHDP_00277	2.09e-286	ackA	2.7.2.1	-	F	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
JMALFHDP_00279	2.52e-296	sacB	2.4.1.10, 2.4.1.9	GH68	M	ko:K00692,ko:K20811	ko00500,ko01100,ko02020,map00500,map01100,map02020	ko00000,ko00001,ko01000,ko01003	Levansucrase/Invertase
JMALFHDP_00280	1.79e-114	sacB	2.4.1.10, 2.4.1.9	GH68	M	ko:K00692,ko:K20811	ko00500,ko01100,ko02020,map00500,map01100,map02020	ko00000,ko00001,ko01000,ko01003	Levansucrase/Invertase
JMALFHDP_00281	8.3e-105	-	-	-	M	-	-	-	Protein of unknown function (DUF3737)
JMALFHDP_00282	3.05e-113	patB	4.4.1.8	-	E	ko:K14155	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko01000,ko01007	Aminotransferase, class I
JMALFHDP_00283	1.03e-242	manA	5.3.1.8	-	G	ko:K01809	ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	mannose-6-phosphate isomerase
JMALFHDP_00284	9.78e-89	-	-	-	S	-	-	-	SdpI/YhfL protein family
JMALFHDP_00285	2.21e-165	-	-	-	K	-	-	-	Transcriptional regulatory protein, C terminal
JMALFHDP_00286	0.0	yclK	-	-	T	-	-	-	Histidine kinase
JMALFHDP_00287	0.0	ltaS	2.7.8.20	-	M	ko:K19005	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
JMALFHDP_00288	4.54e-138	vanZ	-	-	V	-	-	-	VanZ like family
JMALFHDP_00289	0.0	pgi	5.3.1.9	-	G	ko:K01810	ko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the GPI family
JMALFHDP_00290	4.66e-274	-	-	-	EGP	-	-	-	Major Facilitator
JMALFHDP_00291	2.35e-91	-	-	-	-	-	-	-	-
JMALFHDP_00294	9.64e-239	ampC	-	-	V	-	-	-	Beta-lactamase
JMALFHDP_00295	0.0	murE2	6.3.2.13	-	M	ko:K01928	ko00300,ko00550,map00300,map00550	ko00000,ko00001,ko01000,ko01011	Mur ligase, middle domain
JMALFHDP_00296	5.77e-145	tdk	2.7.1.21	-	F	ko:K00857	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	thymidine kinase
JMALFHDP_00297	1.27e-250	prfA	-	-	J	ko:K02835	-	ko00000,ko03012	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
JMALFHDP_00298	4.88e-200	prmC	2.1.1.297	-	J	ko:K02493	-	ko00000,ko01000,ko03012	Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
JMALFHDP_00299	9.87e-242	ywlC	2.7.7.87	-	J	ko:K07566	-	ko00000,ko01000,ko03009,ko03016	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
JMALFHDP_00300	2.24e-147	upp	2.4.2.9	-	F	ko:K00761	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
JMALFHDP_00301	1.43e-162	atpB	-	-	C	ko:K02108	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko03110	it plays a direct role in the translocation of protons across the membrane
JMALFHDP_00302	9.31e-36	atpE	-	-	C	ko:K02110	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
JMALFHDP_00303	1.25e-75	atpF	-	-	C	ko:K02109	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
JMALFHDP_00304	1.88e-119	atpH	-	-	C	ko:K02113	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
JMALFHDP_00305	0.0	atpA	3.6.3.14	-	C	ko:K02111	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko01000	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
JMALFHDP_00306	4.06e-218	atpG	-	-	C	ko:K02115	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
JMALFHDP_00307	0.0	atpD	3.6.3.14	-	C	ko:K02112	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko01000	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
JMALFHDP_00308	2.1e-94	atpC	-	-	C	ko:K02114	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Produces ATP from ADP in the presence of a proton gradient across the membrane
JMALFHDP_00309	3e-41	-	-	-	S	-	-	-	Protein of unknown function (DUF1146)
JMALFHDP_00310	1.01e-228	mbl	-	-	D	ko:K03569	-	ko00000,ko02048,ko03036,ko04812	Cell shape determining protein MreB Mrl
JMALFHDP_00311	2.97e-21	-	-	-	S	-	-	-	DNA-directed RNA polymerase subunit beta
JMALFHDP_00312	6.72e-70	ytjA	-	-	S	ko:K08998	-	ko00000	Could be involved in insertion of integral membrane proteins into the membrane
JMALFHDP_00313	3.08e-47	-	-	-	S	-	-	-	Protein of unknown function (DUF2969)
JMALFHDP_00314	1.12e-285	rodA	-	-	D	ko:K05837	-	ko00000,ko03036	Belongs to the SEDS family
JMALFHDP_00315	3.9e-106	uspA	-	-	T	-	-	-	universal stress protein
JMALFHDP_00316	2.34e-08	-	-	-	-	-	-	-	-
JMALFHDP_00317	2.01e-303	rarA	-	-	L	ko:K07478	-	ko00000	recombination factor protein RarA
JMALFHDP_00318	1.15e-104	-	-	-	S	-	-	-	Protein of unknown function (DUF1694)
JMALFHDP_00319	2.52e-141	rpsD	-	-	J	ko:K02986	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
JMALFHDP_00321	0.0	ezrA	-	-	D	ko:K06286	-	ko00000,ko03036	modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
JMALFHDP_00322	1.75e-275	iscS2	2.8.1.7	-	E	ko:K04487	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko02048,ko03016,ko03029	Aminotransferase class V
JMALFHDP_00323	1.27e-290	thiI	2.8.1.4	-	H	ko:K03151	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko03016	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
JMALFHDP_00324	1.74e-15	rsuA	5.4.99.19	-	J	ko:K06183	-	ko00000,ko01000,ko03009	Belongs to the pseudouridine synthase RsuA family
JMALFHDP_00325	2.39e-122	rsuA	5.4.99.19	-	J	ko:K06183	-	ko00000,ko01000,ko03009	Belongs to the pseudouridine synthase RsuA family
JMALFHDP_00326	2.42e-262	-	-	-	C	-	-	-	Glycerophosphoryl diester phosphodiesterase family
JMALFHDP_00327	0.0	yoaB	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	P-type ATPase
JMALFHDP_00328	0.0	valS	6.1.1.9	-	J	ko:K01873	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
JMALFHDP_00329	5.25e-297	folC	6.3.2.12, 6.3.2.17	-	H	ko:K11754	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the folylpolyglutamate synthase family
JMALFHDP_00330	2.59e-159	-	-	-	S	-	-	-	Haloacid dehalogenase-like hydrolase
JMALFHDP_00331	2.41e-142	radC	-	-	L	ko:K03630	-	ko00000	DNA repair protein
JMALFHDP_00332	3.11e-225	mreB	-	-	D	ko:K03569	-	ko00000,ko02048,ko03036,ko04812	cell shape determining protein MreB
JMALFHDP_00333	2.88e-189	mreC	-	-	M	ko:K03570	-	ko00000,ko03036	Involved in formation and maintenance of cell shape
JMALFHDP_00334	2.59e-119	mreD	-	-	-	ko:K03571	-	ko00000,ko03036	-
JMALFHDP_00335	1.66e-19	-	-	-	S	-	-	-	Protein of unknown function (DUF4044)
JMALFHDP_00336	7.67e-69	-	-	-	S	-	-	-	Protein of unknown function (DUF3397)
JMALFHDP_00337	1.09e-99	mraZ	-	-	K	ko:K03925	-	ko00000	Belongs to the MraZ family
JMALFHDP_00338	7.69e-226	rsmH	2.1.1.199	-	J	ko:K03438	-	ko00000,ko01000,ko03009	Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
JMALFHDP_00339	3.95e-73	ftsL	-	-	D	-	-	-	Cell division protein FtsL
JMALFHDP_00340	0.0	pbpX	-	-	M	ko:K08724,ko:K12552,ko:K12556	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01011	Penicillin-binding Protein
JMALFHDP_00341	1.82e-226	mraY	2.7.8.13	-	M	ko:K01000	ko00550,ko01100,ko01502,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
JMALFHDP_00342	0.0	murD	6.3.2.9	-	M	ko:K01925	ko00471,ko00550,ko01100,map00471,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
JMALFHDP_00343	4.74e-266	murG	2.4.1.227	GT28	M	ko:K02563	ko00550,ko01100,ko01502,ko04112,map00550,map01100,map01502,map04112	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
JMALFHDP_00344	3.39e-196	divIB	-	-	D	ko:K03589	ko04112,map04112	ko00000,ko00001,ko03036	Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
JMALFHDP_00345	6.34e-310	ftsA	-	-	D	ko:K03590	ko04112,map04112	ko00000,ko00001,ko03036,ko04812	Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
JMALFHDP_00346	9.61e-305	ftsZ	-	-	D	ko:K03531	ko04112,map04112	ko00000,ko00001,ko02048,ko03036,ko04812	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
JMALFHDP_00347	4.43e-95	sepF	-	-	D	ko:K09772	-	ko00000,ko03036	Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
JMALFHDP_00348	1.93e-47	ylmG	-	-	S	ko:K02221	-	ko00000,ko02044	YGGT family
JMALFHDP_00349	2.3e-186	ylmH	-	-	S	-	-	-	S4 domain protein
JMALFHDP_00350	4.81e-162	divIVA	-	-	D	ko:K04074	-	ko00000,ko03036	DivIVA domain protein
JMALFHDP_00351	0.0	ileS	6.1.1.5	-	J	ko:K01870	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
JMALFHDP_00352	2.67e-43	cspA	-	-	K	ko:K03704	-	ko00000,ko03000	'Cold-shock' DNA-binding domain
JMALFHDP_00353	6.31e-134	nudF	3.6.1.13	-	L	ko:K01515	ko00230,map00230	ko00000,ko00001,ko01000	ADP-ribose pyrophosphatase
JMALFHDP_00355	1.68e-163	mtnN	3.2.2.9	-	E	ko:K01243	ko00270,ko01100,ko01230,map00270,map01100,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
JMALFHDP_00356	9.69e-273	iscS	2.8.1.7	-	E	ko:K04487	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko02048,ko03016,ko03029	Aminotransferase class V
JMALFHDP_00357	1.8e-76	XK27_04120	-	-	S	-	-	-	Putative amino acid metabolism
JMALFHDP_00358	1.42e-276	mnmA	2.8.1.13	-	J	ko:K00566	ko04122,map04122	ko00000,ko00001,ko01000,ko03016	Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
JMALFHDP_00359	1.19e-156	pgm	-	-	G	-	-	-	Phosphoglycerate mutase family
JMALFHDP_00360	1.98e-148	-	-	-	S	-	-	-	repeat protein
JMALFHDP_00361	0.0	recD2	3.1.11.5	-	L	ko:K03581	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
JMALFHDP_00362	1.25e-213	ytlR	-	-	I	-	-	-	Diacylglycerol kinase catalytic domain
JMALFHDP_00363	0.0	rnjA	-	-	J	ko:K12574	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
JMALFHDP_00364	1.53e-47	ykzG	-	-	S	-	-	-	Belongs to the UPF0356 family
JMALFHDP_00365	2.39e-132	def	3.5.1.88	-	J	ko:K01462	-	ko00000,ko01000	Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
JMALFHDP_00366	0.0	typA	-	-	T	ko:K06207	-	ko00000	GTP-binding protein TypA
JMALFHDP_00367	2.36e-269	ftsW	-	-	D	ko:K03588	ko04112,map04112	ko00000,ko00001,ko02000,ko03036	Belongs to the SEDS family
JMALFHDP_00368	7.67e-69	ylbG	-	-	S	-	-	-	UPF0298 protein
JMALFHDP_00369	7.11e-124	rsmD	2.1.1.171	-	L	ko:K08316	-	ko00000,ko01000,ko03009	RNA methyltransferase, RsmD family
JMALFHDP_00370	4.75e-112	coaD	2.7.7.3	-	H	ko:K00954	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
JMALFHDP_00371	4.1e-227	lon	-	-	T	ko:K07177	ko02024,map02024	ko00000,ko00001,ko01002	Belongs to the peptidase S16 family
JMALFHDP_00372	5.87e-122	comEA	-	-	L	ko:K02237	-	ko00000,ko00002,ko02044	Competence protein ComEA
JMALFHDP_00373	0.0	comEC	-	-	S	ko:K02238	-	ko00000,ko00002,ko02044	Competence protein ComEC
JMALFHDP_00374	8.31e-228	holA	2.7.7.7	-	L	ko:K02340	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III delta subunit
JMALFHDP_00375	5.66e-46	rpsT	-	-	J	ko:K02968	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 16S ribosomal RNA
JMALFHDP_00376	1.44e-56	rpsO	-	-	J	ko:K02956	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
JMALFHDP_00377	0.0	rnjB	-	-	J	ko:K12574	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
JMALFHDP_00378	2.34e-205	-	-	-	-	-	-	-	-
JMALFHDP_00379	6.94e-288	tuf	-	-	J	ko:K02358,ko:K15771	ko02010,map02010	ko00000,ko00001,ko00002,ko02000,ko03012,ko03029,ko04147	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
JMALFHDP_00380	7.75e-273	tig	-	-	D	ko:K03545	-	ko00000	Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
JMALFHDP_00381	2.5e-296	clpX	-	-	O	ko:K03544	ko04112,map04112	ko00000,ko00001,ko03110	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
JMALFHDP_00382	5.34e-134	engB	-	-	D	ko:K03978	-	ko00000,ko03036	Necessary for normal cell division and for the maintenance of normal septation
JMALFHDP_00383	7.72e-114	ptpA	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
JMALFHDP_00384	4.31e-106	-	-	-	-	-	-	-	-
JMALFHDP_00385	3.72e-98	-	-	-	S	-	-	-	Domain of unknown function (DUF4767)
JMALFHDP_00386	3.45e-283	-	-	-	-	-	-	-	-
JMALFHDP_00387	9.03e-158	frnE	5.3.4.1	-	Q	ko:K01829	-	ko00000,ko01000	DSBA-like thioredoxin domain
JMALFHDP_00388	1.15e-205	-	-	-	-	-	-	-	-
JMALFHDP_00389	2.55e-94	-	-	-	K	-	-	-	DNA-templated transcription, initiation
JMALFHDP_00390	9.43e-216	brpA	-	-	K	-	-	-	Cell envelope-like function transcriptional attenuator common domain protein
JMALFHDP_00391	3.79e-191	epsB	-	-	M	-	-	-	biosynthesis protein
JMALFHDP_00392	4.32e-162	ywqD	-	-	D	-	-	-	Capsular exopolysaccharide family
JMALFHDP_00393	4.49e-184	ywqE	3.1.3.48	-	GM	ko:K01104	-	ko00000,ko01000	PHP domain protein
JMALFHDP_00394	2.31e-154	epsE2	-	-	M	-	-	-	Bacterial sugar transferase
JMALFHDP_00395	1.21e-108	-	-	-	M	-	-	-	Oligosaccharide biosynthesis protein Alg14 like
JMALFHDP_00396	4.75e-112	-	-	-	S	-	-	-	Glycosyltransferase family 28 C-terminal domain
JMALFHDP_00397	3.49e-160	-	-	-	M	-	-	-	Glycosyltransferase sugar-binding region containing DXD motif
JMALFHDP_00398	6.16e-236	-	-	-	H	-	-	-	Glycosyl transferase family 11
JMALFHDP_00399	3.53e-206	-	-	GT2	S	ko:K12990	ko02024,ko02025,map02024,map02025	ko00000,ko00001,ko01000,ko01003,ko01005	Glycosyl transferase family 2
JMALFHDP_00400	5.2e-253	-	-	-	M	-	-	-	Glycosyl transferases group 1
JMALFHDP_00401	8.35e-256	-	-	-	M	-	-	-	transferase activity, transferring glycosyl groups
JMALFHDP_00402	1.04e-248	-	-	-	M	-	-	-	Glycosyl transferase family 2
JMALFHDP_00403	4.42e-270	-	-	-	-	-	-	-	-
JMALFHDP_00404	5.02e-278	glf	5.4.99.9	-	M	ko:K01854	ko00052,ko00520,map00052,map00520	ko00000,ko00001,ko01000	UDP-galactopyranose mutase
JMALFHDP_00405	0.0	cps1C	-	-	S	ko:K03328	-	ko00000	Membrane protein involved in the export of O-antigen and teichoic acid
JMALFHDP_00406	2.37e-228	-	-	-	S	-	-	-	Acyltransferase family
JMALFHDP_00407	1.59e-193	tnpA1	-	-	L	-	-	-	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
JMALFHDP_00409	5.39e-91	prrC	-	-	-	-	-	-	-
JMALFHDP_00410	6.99e-133	-	-	-	L	-	-	-	Reverse transcriptase (RNA-dependent DNA polymerase)
JMALFHDP_00412	1.39e-252	-	-	-	K	-	-	-	Psort location Cytoplasmic, score
JMALFHDP_00413	1.02e-98	-	-	-	K	-	-	-	Psort location Cytoplasmic, score
JMALFHDP_00414	3.45e-33	-	-	-	K	-	-	-	Psort location Cytoplasmic, score
JMALFHDP_00415	0.0	-	-	-	L	-	-	-	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
JMALFHDP_00417	1.29e-16	-	-	-	L	-	-	-	nuclease
JMALFHDP_00418	4.35e-182	-	-	-	V	-	-	-	Abi-like protein
JMALFHDP_00419	1.77e-284	-	-	-	KQ	-	-	-	helix_turn_helix, mercury resistance
JMALFHDP_00420	1.67e-266	rfbB	4.2.1.46	-	M	ko:K01710	ko00521,ko00523,ko00525,ko01055,ko01130,map00521,map00523,map00525,map01055,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
JMALFHDP_00421	2.26e-212	rfbA	2.7.7.24	-	H	ko:K00973	ko00521,ko00523,ko00525,ko01130,map00521,map00523,map00525,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
JMALFHDP_00422	3.48e-152	rfbC	5.1.3.13	-	M	ko:K01790	ko00521,ko00523,ko01130,map00521,map00523,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
JMALFHDP_00423	2.43e-240	rfbD	1.1.1.133	-	M	ko:K00067	ko00521,ko00523,ko01130,map00521,map00523,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
JMALFHDP_00424	1.19e-46	-	-	-	S	-	-	-	glycosyl transferase family 2
JMALFHDP_00425	7.18e-259	cas9	-	-	L	ko:K09952	-	ko00000,ko01000,ko02048	CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
JMALFHDP_00426	0.0	cas9	-	-	L	ko:K09952	-	ko00000,ko01000,ko02048	CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
JMALFHDP_00427	3.05e-189	cas1	-	-	L	ko:K15342	-	ko00000,ko02048,ko03400	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
JMALFHDP_00428	2.53e-56	cas2	-	-	L	ko:K09951	-	ko00000,ko02048	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
JMALFHDP_00429	1.05e-101	-	-	-	S	-	-	-	CRISPR-associated protein (Cas_Csn2)
JMALFHDP_00430	1.81e-25	licB2	2.7.1.196, 2.7.1.205	-	G	ko:K02760	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
JMALFHDP_00431	2.22e-98	-	-	-	S	-	-	-	HIRAN
JMALFHDP_00432	7.79e-135	htpX	-	-	O	ko:K03799	-	ko00000,ko00002,ko01000,ko01002	Peptidase family M48
JMALFHDP_00433	0.0	cas3	-	-	L	ko:K07012	-	ko00000,ko01000,ko02048	CRISPR-associated helicase cas3
JMALFHDP_00434	4.98e-185	casA	-	-	L	ko:K19123	-	ko00000,ko02048	the current gene model (or a revised gene model) may contain a frame shift
JMALFHDP_00435	2.63e-38	-	-	-	S	ko:K19046	-	ko00000,ko02048	CRISPR-associated protein Cse2 (CRISPR_cse2)
JMALFHDP_00436	3.62e-141	casC	-	-	L	ko:K19124	-	ko00000,ko02048	CT1975-like protein
JMALFHDP_00437	5.85e-83	casD	-	-	S	ko:K19125	-	ko00000,ko02048	CRISPR-associated protein (Cas_Cas5)
JMALFHDP_00438	2.47e-138	casE	-	-	S	ko:K19126	-	ko00000,ko02048	CRISPR_assoc
JMALFHDP_00439	3.72e-195	cas1	-	-	L	ko:K15342	-	ko00000,ko02048,ko03400	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
JMALFHDP_00440	9.86e-108	cas2	-	-	L	ko:K09951	-	ko00000,ko02048	CRISPR-associated protein (Cas_Cas2CT1978)
JMALFHDP_00441	2.89e-41	-	-	-	-	-	-	-	-
JMALFHDP_00442	1.3e-282	aspC	-	-	E	ko:K00841	ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase
JMALFHDP_00443	5.42e-104	msrB	1.8.4.12	-	O	ko:K07305	-	ko00000,ko01000	peptide methionine sulfoxide reductase
JMALFHDP_00444	4.15e-183	-	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase family
JMALFHDP_00445	5.77e-135	msrA	1.8.4.11, 1.8.4.12	-	O	ko:K07304,ko:K12267	-	ko00000,ko01000	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
JMALFHDP_00446	1.71e-206	yitT	-	-	S	-	-	-	Uncharacterised 5xTM membrane BCR, YitT family COG1284
JMALFHDP_00447	9.43e-201	yqfL	2.7.11.33, 2.7.4.28	-	F	ko:K09773	-	ko00000,ko01000	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
JMALFHDP_00448	8.33e-31	rpsU	-	-	J	ko:K02970	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bS21 family
JMALFHDP_00449	1.62e-78	yqeY	-	-	S	ko:K09117	-	ko00000	YqeY-like protein
JMALFHDP_00450	1.67e-222	phoH	-	-	T	ko:K06217	-	ko00000	phosphate starvation-inducible protein PhoH
JMALFHDP_00451	4.52e-128	ybeY	-	-	S	ko:K07042	-	ko00000,ko03009	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
JMALFHDP_00452	4.24e-217	era	-	-	S	ko:K03595	-	ko00000,ko03009,ko03029	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
JMALFHDP_00453	4.14e-177	recO	-	-	L	ko:K03584	ko03440,map03440	ko00000,ko00001,ko03400	Involved in DNA repair and RecF pathway recombination
JMALFHDP_00454	1.82e-228	glyQ	6.1.1.14	-	J	ko:K01878	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	glycyl-tRNA synthetase alpha subunit
JMALFHDP_00455	0.0	glyS	6.1.1.14	-	J	ko:K01879	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Glycyl-tRNA synthetase beta subunit
JMALFHDP_00456	0.0	dnaG	-	-	L	ko:K02316	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
JMALFHDP_00457	9.34e-254	sigA	-	-	K	ko:K03086	-	ko00000,ko03021	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
JMALFHDP_00458	9.75e-151	trmK	2.1.1.217	-	S	ko:K06967	-	ko00000,ko01000,ko03016	SAM-dependent methyltransferase
JMALFHDP_00459	2.24e-193	yqfO	-	-	S	-	-	-	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
JMALFHDP_00460	1.22e-309	pepT	3.4.11.4	-	E	ko:K01258	-	ko00000,ko01000,ko01002	Cleaves the N-terminal amino acid of tripeptides
JMALFHDP_00461	8.55e-78	lexA	-	-	K	ko:K07979	-	ko00000,ko03000	Transcriptional regulator, GntR family
JMALFHDP_00462	1.2e-159	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
JMALFHDP_00463	1.69e-171	-	-	-	-	-	-	-	-
JMALFHDP_00464	2.2e-140	-	-	-	-	-	-	-	-
JMALFHDP_00465	1.45e-30	-	-	-	-	-	-	-	-
JMALFHDP_00466	1.8e-134	lepB	3.4.21.89	-	U	ko:K03100	ko02024,ko03060,map02024,map03060	ko00000,ko00001,ko01000,ko01002	Belongs to the peptidase S26 family
JMALFHDP_00467	3e-169	-	-	-	-	-	-	-	-
JMALFHDP_00468	2.33e-216	-	-	-	-	-	-	-	-
JMALFHDP_00469	7.38e-296	rsmF	-	-	J	-	-	-	NOL1 NOP2 sun family protein
JMALFHDP_00470	1.02e-67	ybjQ	-	-	S	-	-	-	Belongs to the UPF0145 family
JMALFHDP_00471	6.79e-213	-	-	-	S	-	-	-	DUF218 domain
JMALFHDP_00472	5.68e-90	yxeH	-	-	S	-	-	-	hydrolase
JMALFHDP_00473	5.1e-86	yxeH	-	-	S	-	-	-	hydrolase
JMALFHDP_00474	0.0	-	-	-	I	-	-	-	Protein of unknown function (DUF2974)
JMALFHDP_00475	4.17e-149	pyrE	2.4.2.10	-	F	ko:K00762	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
JMALFHDP_00476	2.49e-166	pyrF	4.1.1.23	-	F	ko:K01591	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
JMALFHDP_00477	1.15e-212	pyrD	1.3.1.14, 1.3.98.1	-	F	ko:K00226,ko:K17828	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
JMALFHDP_00478	7.99e-120	pyrR	2.4.2.9	-	F	ko:K02825	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000,ko03000	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
JMALFHDP_00479	2.4e-232	pyrB	2.1.3.2	-	F	ko:K00609	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the ATCase OTCase family
JMALFHDP_00480	1.54e-308	pyrC	3.5.2.3	-	F	ko:K01465	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
JMALFHDP_00481	4.38e-267	carA	6.3.5.5	-	F	ko:K01956	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthetase glutamine chain
JMALFHDP_00482	0.0	carB	6.3.5.5	-	F	ko:K01955	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthase
JMALFHDP_00483	4.14e-121	pyrR	2.4.2.9	-	F	ko:K02825	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000,ko03000	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
JMALFHDP_00484	8.05e-134	pncA	-	-	Q	-	-	-	Isochorismatase family
JMALFHDP_00485	0.0	ppc	4.1.1.31	-	H	ko:K01595	ko00620,ko00680,ko00710,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00710,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
JMALFHDP_00486	2.93e-159	alkD	-	-	L	-	-	-	DNA alkylation repair enzyme
JMALFHDP_00487	5e-162	-	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
JMALFHDP_00488	0.0	ylbB	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter permease
JMALFHDP_00489	8.69e-118	-	-	-	S	ko:K07150	-	ko00000	Protein of unknown function (DUF554)
JMALFHDP_00490	1.95e-62	-	-	-	K	-	-	-	LysR substrate binding domain
JMALFHDP_00491	4.15e-305	yclC	4.1.1.61, 4.1.1.98	-	H	ko:K01612,ko:K03182,ko:K16874	ko00130,ko00365,ko00627,ko01100,ko01110,ko01120,ko01220,map00130,map00365,map00627,map01100,map01110,map01120,map01220	ko00000,ko00001,ko00002,ko01000	3-octaprenyl-4-hydroxybenzoate carboxy-lyase
JMALFHDP_00492	6.78e-86	ubiX	2.5.1.129	-	H	ko:K03186	ko00130,ko00627,ko00940,ko01100,ko01110,ko01120,ko01220,map00130,map00627,map00940,map01100,map01110,map01120,map01220	ko00000,ko00001,ko00002,ko01000	Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN
JMALFHDP_00493	1.85e-28	-	-	-	-	-	-	-	-
JMALFHDP_00494	0.0	pepO	-	-	O	ko:K07386	-	ko00000,ko01000,ko01002	Peptidase family M13
JMALFHDP_00495	0.0	lysC	2.7.2.4	-	E	ko:K00928	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the aspartokinase family
JMALFHDP_00496	1.05e-253	asd	1.2.1.11	-	E	ko:K00133	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
JMALFHDP_00497	0.0	thrC	4.2.3.1	-	E	ko:K01733	ko00260,ko00750,ko01100,ko01110,ko01120,ko01230,map00260,map00750,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Threonine synthase
JMALFHDP_00498	8.89e-288	hom	1.1.1.3	-	E	ko:K00003	ko00260,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00270,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	homoserine dehydrogenase
JMALFHDP_00499	8.05e-198	thrB	2.7.1.39	-	F	ko:K00872	ko00260,ko01100,ko01110,ko01120,ko01230,map00260,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
JMALFHDP_00500	1.21e-63	-	-	-	K	-	-	-	LysR substrate binding domain
JMALFHDP_00501	6.58e-267	-	-	-	C	-	-	-	FMN_bind
JMALFHDP_00502	1.03e-74	-	-	-	C	-	-	-	FMN_bind
JMALFHDP_00503	1.57e-152	-	-	-	C	-	-	-	nitroreductase
JMALFHDP_00504	2.9e-35	-	-	-	-	-	-	-	-
JMALFHDP_00505	1.42e-66	-	-	-	-	-	-	-	-
JMALFHDP_00506	6.53e-48	-	-	-	G	ko:K02777	ko00010,ko00500,ko00520,ko02026,ko02060,ko05111,map00010,map00500,map00520,map02026,map02060,map05111	ko00000,ko00001,ko00002,ko01000,ko02000	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
JMALFHDP_00507	1.37e-81	-	-	-	K	ko:K03488	-	ko00000,ko03000	CAT RNA binding domain
JMALFHDP_00508	1.7e-216	-	-	-	G	ko:K02755,ko:K02756,ko:K02757	ko02060,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system, EIIB
JMALFHDP_00509	9.4e-109	-	3.5.1.105	-	G	ko:K03478	-	ko00000,ko01000	YdjC-like protein
JMALFHDP_00510	3.66e-94	-	-	-	G	-	-	-	Ribose/Galactose Isomerase
JMALFHDP_00511	0.0	XK27_00340	3.1.3.5	-	F	ko:K01081	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the 5'-nucleotidase family
JMALFHDP_00512	3.63e-115	-	-	-	-	-	-	-	-
JMALFHDP_00513	3.33e-17	-	-	-	-	-	-	-	-
JMALFHDP_00514	1.62e-133	yokL3	-	-	J	-	-	-	Acetyltransferase (GNAT) domain
JMALFHDP_00515	5.57e-87	-	-	-	K	-	-	-	sequence-specific DNA binding
JMALFHDP_00516	1.29e-51	-	-	-	S	-	-	-	SnoaL-like domain
JMALFHDP_00517	2.77e-180	-	-	-	S	-	-	-	Protein of unknown function (DUF975)
JMALFHDP_00518	1.1e-181	hflC	-	-	O	ko:K04087	-	ko00000,ko00002,ko01000	prohibitin homologues
JMALFHDP_00519	6.12e-190	-	-	-	K	-	-	-	Helix-turn-helix domain
JMALFHDP_00520	0.0	-	-	-	V	ko:K06147,ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
JMALFHDP_00521	4.26e-103	yfhC	-	-	C	-	-	-	nitroreductase
JMALFHDP_00522	0.0	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC transporter transmembrane region
JMALFHDP_00523	5.63e-63	-	-	-	-	-	-	-	-
JMALFHDP_00524	7.58e-98	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
JMALFHDP_00525	1.02e-61	-	-	-	S	-	-	-	MazG-like family
JMALFHDP_00526	1.55e-74	-	-	-	-	-	-	-	-
JMALFHDP_00527	4.58e-31	-	-	-	S	-	-	-	Protein of unknown function (DUF3923)
JMALFHDP_00528	6.11e-68	-	-	-	S	ko:K19157	-	ko00000,ko01000,ko02048	endonuclease activity
JMALFHDP_00529	2.21e-57	-	-	-	-	ko:K07473	-	ko00000,ko02048	-
JMALFHDP_00530	1.9e-121	rimL	-	-	J	ko:K03817	-	ko00000,ko01000,ko03009	Acetyltransferase (GNAT) domain
JMALFHDP_00531	6.75e-105	-	2.3.1.57	-	K	ko:K00657	ko00330,ko01100,ko04216,map00330,map01100,map04216	ko00000,ko00001,ko00002,ko01000	Acetyltransferase (GNAT) family
JMALFHDP_00533	6.69e-57	yjhB	3.6.1.13	-	F	ko:K01515	ko00230,map00230	ko00000,ko00001,ko01000	NUDIX domain
JMALFHDP_00534	4.63e-65	yjhB	3.6.1.13	-	F	ko:K01515	ko00230,map00230	ko00000,ko00001,ko01000	NUDIX domain
JMALFHDP_00535	3.68e-247	yxaM	-	-	EGP	-	-	-	Major facilitator Superfamily
JMALFHDP_00536	2.37e-88	-	-	-	F	-	-	-	NUDIX domain
JMALFHDP_00537	5.4e-175	-	-	-	F	-	-	-	Phosphorylase superfamily
JMALFHDP_00538	2.26e-104	-	-	-	S	-	-	-	ASCH
JMALFHDP_00539	5.83e-87	rbsD	5.4.99.62	-	G	ko:K06726	ko02010,map02010	ko00000,ko00001,ko01000	Catalyzes the interconversion of beta-pyran and beta- furan forms of D-ribose
JMALFHDP_00540	4.7e-206	rbsU	-	-	U	ko:K06216	-	ko00000,ko02000	ribose uptake protein RbsU
JMALFHDP_00541	9.52e-197	-	2.3.1.81	-	V	ko:K00662	-	ko00000,ko01000,ko01504	Aminoglycoside 3-N-acetyltransferase
JMALFHDP_00542	2.54e-198	-	-	-	G	-	-	-	Transmembrane secretion effector
JMALFHDP_00543	0.0	-	-	-	V	ko:K06147,ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
JMALFHDP_00544	0.0	-	-	-	V	ko:K06147,ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
JMALFHDP_00545	4.33e-236	fni	5.3.3.2	-	C	ko:K01823	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
JMALFHDP_00546	2.53e-260	mvaK2	2.7.4.2	-	I	ko:K00938	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	phosphomevalonate kinase
JMALFHDP_00547	1.37e-222	mvaD	4.1.1.33	-	I	ko:K01597	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	diphosphomevalonate decarboxylase
JMALFHDP_00548	2.01e-211	mvk	2.7.1.36	-	I	ko:K00869	ko00900,ko01100,ko01110,ko01130,ko04146,map00900,map01100,map01110,map01130,map04146	ko00000,ko00001,ko00002,ko01000	GHMP kinases N terminal domain
JMALFHDP_00549	0.0	rexB	3.6.4.12	-	L	ko:K16899	-	ko00000,ko01000,ko03400	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
JMALFHDP_00550	0.0	addA	3.6.4.12	-	L	ko:K16898	-	ko00000,ko01000,ko03400	ATP-dependent helicase nuclease subunit A
JMALFHDP_00551	0.0	dinG	3.6.4.12	-	L	ko:K03722	-	ko00000,ko01000,ko03400	helicase involved in DNA repair and perhaps also replication
JMALFHDP_00552	1.8e-115	ypmB	-	-	S	-	-	-	Protein conserved in bacteria
JMALFHDP_00553	0.0	asnS	6.1.1.22	-	J	ko:K01893	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Asparaginyl-tRNA synthetase
JMALFHDP_00554	1.7e-149	dnaD	-	-	L	ko:K02086	-	ko00000	DnaD domain protein
JMALFHDP_00555	6.69e-149	nth	4.2.99.18	-	L	ko:K10773	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
JMALFHDP_00556	0.0	ponA	2.4.1.129, 3.4.16.4	GT51	M	ko:K05366	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01003,ko01011	penicillin-binding protein 1A
JMALFHDP_00557	1.63e-152	recU	-	-	L	ko:K03700	-	ko00000,ko03400	Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
JMALFHDP_00558	6.29e-135	ypsA	-	-	S	-	-	-	Belongs to the UPF0398 family
JMALFHDP_00559	1.37e-94	gpsB	-	-	D	-	-	-	Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
JMALFHDP_00560	2.29e-275	ypsC	-	-	L	ko:K07444	-	ko00000,ko01000	Belongs to the methyltransferase superfamily
JMALFHDP_00561	3.7e-241	cpdA	-	-	S	-	-	-	Calcineurin-like phosphoesterase
JMALFHDP_00562	9.05e-28	cpdA	-	-	S	-	-	-	Calcineurin-like phosphoesterase
JMALFHDP_00563	2.75e-221	degV1	-	-	S	-	-	-	DegV family
JMALFHDP_00564	9.19e-76	-	-	-	-	-	-	-	-
JMALFHDP_00565	0.0	fhs	6.3.4.3	-	F	ko:K01938	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Belongs to the formate--tetrahydrofolate ligase family
JMALFHDP_00566	1.83e-101	lspA	3.4.23.36	-	MU	ko:K03101	ko03060,map03060	ko00000,ko00001,ko01000,ko01002	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
JMALFHDP_00567	1.43e-220	rluD	5.4.99.23	-	J	ko:K06180	-	ko00000,ko01000,ko03009	Responsible for synthesis of pseudouridine from uracil
JMALFHDP_00568	1.55e-250	carA	6.3.5.5	-	F	ko:K01956	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthetase glutamine chain
JMALFHDP_00569	0.0	carB1	6.3.5.5	-	F	ko:K01955	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthase
JMALFHDP_00570	0.0	FbpA	-	-	K	-	-	-	Fibronectin-binding protein
JMALFHDP_00571	1.16e-84	-	-	-	-	-	-	-	-
JMALFHDP_00572	1.3e-207	-	-	-	S	-	-	-	EDD domain protein, DegV family
JMALFHDP_00573	8.08e-196	-	-	-	-	-	-	-	-
JMALFHDP_00574	7.79e-205	lysR	-	-	K	-	-	-	Transcriptional regulator
JMALFHDP_00575	1.34e-258	xerS	-	-	L	ko:K03733	-	ko00000,ko03036	Belongs to the 'phage' integrase family
JMALFHDP_00576	1.1e-161	-	-	-	S	-	-	-	Protein of unknown function (DUF1275)
JMALFHDP_00577	2.84e-47	ppiB	5.2.1.8	-	G	ko:K03768	-	ko00000,ko01000,ko03110	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
JMALFHDP_00578	1.07e-63	ppiB	5.2.1.8	-	G	ko:K03768	-	ko00000,ko01000,ko03110	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
JMALFHDP_00579	1.15e-244	recQ	3.6.4.12	-	L	ko:K03654	ko03018,map03018	ko00000,ko00001,ko01000,ko03400	ATP-dependent DNA helicase RecQ
JMALFHDP_00580	1.1e-144	recQ	3.6.4.12	-	L	ko:K03654	ko03018,map03018	ko00000,ko00001,ko01000,ko03400	ATP-dependent DNA helicase RecQ
JMALFHDP_00581	3.35e-218	ppaC	3.6.1.1	-	C	ko:K15986	ko00190,map00190	ko00000,ko00001,ko01000	inorganic pyrophosphatase
JMALFHDP_00582	1.62e-228	-	-	-	K	-	-	-	Transcriptional regulator
JMALFHDP_00583	0.0	parC	-	-	L	ko:K02621	-	ko00000,ko01000,ko02048,ko03032,ko03036	Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
JMALFHDP_00584	0.0	parE	-	-	L	ko:K02622	-	ko00000,ko01000,ko02048,ko03032,ko03036	Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
JMALFHDP_00585	3.03e-150	plsY	2.3.1.15	-	I	ko:K08591	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
JMALFHDP_00586	8.12e-148	maa3	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	transferase hexapeptide repeat
JMALFHDP_00587	6.67e-157	nth2	-	-	L	ko:K07457	-	ko00000	Base excision DNA repair protein, HhH-GPD family
JMALFHDP_00588	8.52e-211	akr5f	1.1.1.346	-	S	ko:K06221	-	ko00000,ko01000	reductase
JMALFHDP_00589	6.05e-202	-	-	-	C	-	-	-	Aldo/keto reductase family
JMALFHDP_00590	9.95e-146	ybhL	-	-	S	ko:K06890	-	ko00000	Belongs to the BI1 family
JMALFHDP_00591	1.1e-135	-	-	-	S	ko:K07045	-	ko00000	Amidohydrolase
JMALFHDP_00592	4.17e-42	-	-	-	S	ko:K07045	-	ko00000	Amidohydrolase
JMALFHDP_00593	1.43e-310	-	-	-	L	ko:K07478	-	ko00000	AAA C-terminal domain
JMALFHDP_00594	8.44e-161	-	-	-	S	-	-	-	Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
JMALFHDP_00595	1.35e-108	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
JMALFHDP_00596	9.36e-36	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
JMALFHDP_00597	3.53e-252	XK27_00915	-	-	C	-	-	-	Luciferase-like monooxygenase
JMALFHDP_00599	1.48e-80	-	-	-	S	ko:K07090	-	ko00000	membrane transporter protein
JMALFHDP_00600	2.6e-77	-	-	-	K	ko:K07506	-	ko00000,ko03000	helix_turn_helix, arabinose operon control protein
JMALFHDP_00601	2.29e-95	ogt	2.1.1.63	-	L	ko:K00567,ko:K10778	-	ko00000,ko01000,ko03000,ko03400	6-O-methylguanine DNA methyltransferase, DNA binding domain
JMALFHDP_00602	3.28e-89	-	-	-	K	-	-	-	Transcriptional regulator
JMALFHDP_00603	1.39e-268	-	-	-	U	-	-	-	Belongs to the major facilitator superfamily
JMALFHDP_00604	0.0	npr	1.11.1.1	-	C	ko:K05910	-	ko00000,ko01000	NADH oxidase
JMALFHDP_00605	3.74e-38	-	-	-	G	ko:K03292	-	ko00000	Major facilitator Superfamily
JMALFHDP_00606	4.35e-169	-	-	-	K	-	-	-	COG COG0846 NAD-dependent protein deacetylases, SIR2 family
JMALFHDP_00607	3.95e-309	-	-	-	K	-	-	-	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
JMALFHDP_00608	1.61e-60	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
JMALFHDP_00609	2.03e-234	mdt(A)	-	-	EGP	ko:K08217	-	br01600,ko00000,ko01504,ko02000	Transmembrane secretion effector
JMALFHDP_00610	1.57e-150	-	-	-	GM	-	-	-	NAD(P)H-binding
JMALFHDP_00611	4.43e-296	-	-	-	E	-	-	-	Alpha/beta hydrolase of unknown function (DUF1100)
JMALFHDP_00612	1.24e-129	-	-	-	K	-	-	-	Transcriptional regulator C-terminal region
JMALFHDP_00614	1.57e-197	-	-	-	C	-	-	-	Aldo keto reductase
JMALFHDP_00615	1.38e-203	lmrA	3.6.3.44	-	V	ko:K02021,ko:K18104	ko01501,ko02010,map01501,map02010	ko00000,ko00001,ko00002,ko01000,ko01504,ko02000	ABC transporter
JMALFHDP_00616	0.0	mgtA	3.6.3.2	-	P	ko:K01531	-	ko00000,ko01000	COG0474 Cation transport ATPase
JMALFHDP_00617	1.88e-19	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
JMALFHDP_00618	4.34e-40	-	3.2.1.31	-	G	ko:K01195	ko00040,ko00531,ko00860,ko00944,ko00983,ko01100,ko01110,ko04142,map00040,map00531,map00860,map00944,map00983,map01100,map01110,map04142	ko00000,ko00001,ko00002,ko01000	Belongs to the glycosyl hydrolase 2 family
JMALFHDP_00619	2.73e-240	cbh	3.5.1.24	-	M	ko:K01442	ko00120,ko00121,ko01100,map00120,map00121,map01100	ko00000,ko00001,ko01000	Linear amide C-N hydrolase, choloylglycine hydrolase family protein
JMALFHDP_00620	4.29e-53	-	-	-	S	-	-	-	Cupin domain
JMALFHDP_00621	0.0	-	-	-	V	ko:K06147,ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
JMALFHDP_00622	0.0	-	-	-	P	ko:K06147,ko:K06148	-	ko00000,ko02000	ABC transporter
JMALFHDP_00623	1.6e-98	dhrS4	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Oxidoreductase, short chain dehydrogenase reductase family protein
JMALFHDP_00624	9.54e-19	dhrS4	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	KR domain
JMALFHDP_00625	5.5e-279	dgoD	4.2.1.6, 4.2.1.8	-	M	ko:K01684,ko:K08323	ko00040,ko00052,ko01100,ko01120,map00040,map00052,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Mandelate racemase muconate lactonizing enzyme
JMALFHDP_00626	4.82e-27	-	-	-	-	-	-	-	-
JMALFHDP_00627	1.37e-88	-	-	-	K	-	-	-	HxlR family
JMALFHDP_00628	2.25e-307	mntH	-	-	P	ko:K03322	-	ko00000,ko02000	H( )-stimulated, divalent metal cation uptake system
JMALFHDP_00629	5.49e-58	yitW	-	-	S	-	-	-	Iron-sulfur cluster assembly protein
JMALFHDP_00630	0.0	sufB	-	-	O	ko:K07033,ko:K09014	-	ko00000	assembly protein SufB
JMALFHDP_00631	1.8e-82	nifU	-	-	C	ko:K04488	-	ko00000	SUF system FeS assembly protein, NifU family
JMALFHDP_00632	1.31e-236	sufS	2.8.1.7, 4.4.1.16	-	E	ko:K11717	ko00450,ko01100,map00450,map01100	ko00000,ko00001,ko01000	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
JMALFHDP_00633	1.25e-250	sufD	-	-	O	ko:K07033,ko:K09015	-	ko00000	FeS assembly protein SufD
JMALFHDP_00634	6.56e-181	sufC	-	-	O	ko:K09013	-	ko00000,ko02000	FeS assembly ATPase SufC
JMALFHDP_00635	6.83e-315	brnQ	-	-	U	ko:K03311	-	ko00000	Component of the transport system for branched-chain amino acids
JMALFHDP_00636	8.5e-90	-	-	-	S	ko:K11621	ko02020,map02020	ko00000,ko00001	Putative adhesin
JMALFHDP_00637	4.53e-146	yjhB	3.6.1.13	-	F	ko:K01515	ko00230,map00230	ko00000,ko00001,ko01000	NUDIX domain
JMALFHDP_00638	1.86e-141	-	-	-	S	ko:K07025	-	ko00000	Haloacid dehalogenase-like hydrolase
JMALFHDP_00639	2.2e-23	-	-	-	S	-	-	-	reductase
JMALFHDP_00641	1.15e-168	-	1.1.1.346	-	S	ko:K06221	-	ko00000,ko01000	Oxidoreductase, aldo keto reductase family protein
JMALFHDP_00642	1.8e-08	-	-	-	K	-	-	-	Transcriptional regulator
JMALFHDP_00643	8.43e-60	-	-	-	K	-	-	-	Transcriptional regulator
JMALFHDP_00644	5.74e-143	ybbB	-	-	S	-	-	-	Protein of unknown function (DUF1211)
JMALFHDP_00645	4.09e-96	-	-	-	K	-	-	-	LytTr DNA-binding domain
JMALFHDP_00646	5.92e-83	-	-	-	S	-	-	-	Protein of unknown function (DUF3021)
JMALFHDP_00647	1.04e-145	budA	4.1.1.5	-	Q	ko:K01575	ko00650,ko00660,map00650,map00660	ko00000,ko00001,ko01000	Alpha-acetolactate decarboxylase
JMALFHDP_00648	0.0	alsS	2.2.1.6	-	EH	ko:K01652	ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the TPP enzyme family
JMALFHDP_00649	4.35e-125	-	2.3.1.128	-	K	ko:K03790	-	ko00000,ko01000,ko03009	Acetyltransferase (GNAT) domain
JMALFHDP_00650	1.47e-167	ybbM	-	-	S	ko:K02069	-	ko00000,ko00002,ko02000	Uncharacterised protein family (UPF0014)
JMALFHDP_00651	3.39e-139	ybbL	-	-	S	ko:K02068	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
JMALFHDP_00652	2.49e-149	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
JMALFHDP_00653	2.4e-68	-	-	-	K	ko:K21498	-	ko00000,ko02048	Helix-turn-helix XRE-family like proteins
JMALFHDP_00654	1.12e-54	-	-	-	K	ko:K15773	-	ko00000,ko02048,ko03000	peptidyl-tyrosine sulfation
JMALFHDP_00655	2.16e-14	rnhA	-	-	L	ko:K06993	-	ko00000	Caulimovirus viroplasmin
JMALFHDP_00656	5.01e-17	-	-	-	D	-	-	-	nuclear chromosome segregation
JMALFHDP_00657	8.54e-54	-	-	-	-	-	-	-	-
JMALFHDP_00658	9.07e-280	yjcA	-	-	S	ko:K19350	ko02010,map02010	ko00000,ko00001,ko01504,ko02000	ABC transporter
JMALFHDP_00659	2.65e-135	-	-	-	S	-	-	-	Alpha beta hydrolase
JMALFHDP_00660	3.46e-46	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2255)
JMALFHDP_00661	2.1e-38	adh1	1.1.1.1	-	E	ko:K00001	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	alcohol dehydrogenase
JMALFHDP_00662	3.93e-110	-	-	-	S	-	-	-	NADPH-dependent FMN reductase
JMALFHDP_00663	6.23e-187	-	-	-	K	-	-	-	Transcriptional regulator
JMALFHDP_00664	1.55e-241	tanA	-	-	S	-	-	-	alpha beta
JMALFHDP_00665	9.01e-28	-	-	-	K	-	-	-	Psort location Cytoplasmic, score
JMALFHDP_00666	1.09e-230	-	-	-	S	-	-	-	Conserved hypothetical protein 698
JMALFHDP_00667	3.13e-88	-	-	-	-	-	-	-	-
JMALFHDP_00669	1.17e-129	-	-	-	S	ko:K07038	-	ko00000	LexA-binding, inner membrane-associated putative hydrolase
JMALFHDP_00670	1.59e-123	-	-	-	K	-	-	-	LysR substrate binding domain
JMALFHDP_00671	1.44e-229	lacX	5.1.3.3	-	G	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Aldose 1-epimerase
JMALFHDP_00672	0.0	hslU	-	-	O	ko:K03667	-	ko00000,ko03110	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
JMALFHDP_00673	7.75e-115	hslV	3.4.25.2	-	O	ko:K01419	-	ko00000,ko01000,ko01002	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
JMALFHDP_00674	2.11e-219	xerC	-	-	D	ko:K03733,ko:K04763	-	ko00000,ko03036	Phage integrase, N-terminal SAM-like domain
JMALFHDP_00675	1.39e-313	trmFO	2.1.1.74	-	J	ko:K04094	-	ko00000,ko01000,ko03016,ko03036	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
JMALFHDP_00676	0.0	topA	5.99.1.2	-	L	ko:K03168	-	ko00000,ko01000,ko03032,ko03400	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
JMALFHDP_00677	2.69e-193	dprA	-	-	LU	ko:K04096	-	ko00000	DNA protecting protein DprA
JMALFHDP_00678	1.81e-171	rnhB	3.1.26.4	-	L	ko:K03470	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
JMALFHDP_00679	4.91e-204	rbgA	-	-	S	ko:K14540	-	ko00000,ko03009	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
JMALFHDP_00680	0.0	ctpA	3.4.21.102	-	M	ko:K03797	-	ko00000,ko01000,ko01002	Belongs to the peptidase S41A family
JMALFHDP_00681	3.74e-48	yozE	-	-	S	-	-	-	Belongs to the UPF0346 family
JMALFHDP_00682	3.67e-193	degV3	-	-	S	-	-	-	Uncharacterised protein, DegV family COG1307
JMALFHDP_00683	5.61e-147	hlyIII	-	-	S	ko:K11068	-	ko00000,ko02042	protein, hemolysin III
JMALFHDP_00684	4.55e-285	cca	2.7.7.72	-	J	ko:K00974	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
JMALFHDP_00685	1.35e-205	XK27_10395	-	-	S	-	-	-	Uncharacterised 5xTM membrane BCR, YitT family COG1284
JMALFHDP_00686	3.55e-230	-	-	-	S	ko:K07133	-	ko00000	cog cog1373
JMALFHDP_00687	0.0	-	-	-	C	-	-	-	FMN_bind
JMALFHDP_00688	1.52e-51	-	-	-	K	-	-	-	SIR2-like domain
JMALFHDP_00689	4e-63	-	-	-	K	-	-	-	SIR2-like domain
JMALFHDP_00690	0.0	-	-	-	N	ko:K09384	-	ko00000	Uncharacterized conserved protein (DUF2075)
JMALFHDP_00692	3.62e-294	XK27_05225	-	-	S	-	-	-	Tetratricopeptide repeat protein
JMALFHDP_00693	7.91e-55	hup	-	-	L	ko:K03530	-	ko00000,ko03032,ko03036,ko03400	Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
JMALFHDP_00694	5.59e-307	der	-	-	S	ko:K03977	-	ko00000,ko03009	GTPase that plays an essential role in the late steps of ribosome biogenesis
JMALFHDP_00695	1.51e-279	rpsA	-	-	J	ko:K02945	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein S1
JMALFHDP_00696	1.03e-151	cmk	2.7.4.25	-	F	ko:K00945	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the cytidylate kinase family. Type 1 subfamily
JMALFHDP_00697	7.54e-126	ribU	-	-	U	-	-	-	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
JMALFHDP_00698	1.39e-94	-	-	-	M	-	-	-	Lysin motif
JMALFHDP_00699	1.79e-167	rluB	5.4.99.22	-	J	ko:K06178	-	ko00000,ko01000,ko03009	Belongs to the pseudouridine synthase RsuA family
JMALFHDP_00700	3.57e-136	scpB	-	-	D	ko:K06024	-	ko00000,ko03036	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
JMALFHDP_00701	1.75e-172	scpA	-	-	D	ko:K05896	-	ko00000,ko03036	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
JMALFHDP_00702	7.97e-82	ribT	-	-	K	ko:K02859	-	ko00000	acetyltransferase
JMALFHDP_00703	3.22e-216	xerD	-	-	D	ko:K04763	-	ko00000,ko03036	recombinase XerD
JMALFHDP_00704	8.19e-212	yitL	-	-	S	ko:K00243	-	ko00000	S1 domain
JMALFHDP_00705	0.0	pyk	2.7.1.40	-	G	ko:K00873	ko00010,ko00230,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko04930,ko05165,ko05203,ko05230,map00010,map00230,map00620,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map04930,map05165,map05203,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Belongs to the pyruvate kinase family
JMALFHDP_00706	1.19e-231	pfkA	2.7.1.11	-	F	ko:K00850	ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04152,ko05230,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04152,map05230	ko00000,ko00001,ko00002,ko01000,ko01009,ko03019	Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
JMALFHDP_00708	0.0	dnaE	2.7.7.7	-	L	ko:K02337	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase
JMALFHDP_00709	1.57e-37	-	-	-	S	-	-	-	Protein of unknown function (DUF2929)
JMALFHDP_00710	0.0	yfkN	3.1.3.6, 3.1.4.16	-	F	ko:K01119	ko00230,ko00240,map00230,map00240	ko00000,ko00001,ko01000	Belongs to the 5'-nucleotidase family
JMALFHDP_00711	3.88e-38	rpmF	-	-	J	ko:K02911	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Belongs to the bacterial ribosomal protein bL32 family
JMALFHDP_00712	6.4e-62	-	-	-	S	-	-	-	Lipopolysaccharide assembly protein A domain
JMALFHDP_00713	5.86e-184	-	-	-	S	ko:K07124	-	ko00000	Belongs to the short-chain dehydrogenases reductases (SDR) family
JMALFHDP_00714	2.29e-224	rnz	3.1.26.11	-	J	ko:K00784	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
JMALFHDP_00715	0.0	oatA	-	-	I	-	-	-	Acyltransferase
JMALFHDP_00716	1.03e-303	obg	-	-	S	ko:K03979	-	ko00000,ko01000,ko03009	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
JMALFHDP_00717	0.0	uvrC	-	-	L	ko:K03703	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
JMALFHDP_00718	7.94e-220	iunH	3.2.2.1	-	F	ko:K01239	ko00230,ko00760,ko01100,map00230,map00760,map01100	ko00000,ko00001,ko01000	inosine-uridine preferring nucleoside hydrolase
JMALFHDP_00719	3.3e-137	apl	3.1.3.1	-	S	ko:K01077	ko00730,ko00790,ko01100,ko02020,map00730,map00790,map01100,map02020	ko00000,ko00001,ko00002,ko00537,ko01000,ko04147	SNARE associated Golgi protein
JMALFHDP_00720	8.63e-148	-	-	-	GM	-	-	-	NmrA-like family
JMALFHDP_00721	3.55e-313	yagE	-	-	E	-	-	-	amino acid
JMALFHDP_00722	6.65e-137	-	-	-	S	-	-	-	Rib/alpha-like repeat
JMALFHDP_00723	4.99e-84	-	-	-	S	-	-	-	Domain of unknown function DUF1828
JMALFHDP_00724	2.11e-89	-	-	-	-	-	-	-	-
JMALFHDP_00725	3.4e-58	-	-	-	-	-	-	-	-
JMALFHDP_00726	4.95e-107	-	3.6.1.55	-	F	ko:K03574	-	ko00000,ko01000,ko03400	NUDIX domain
JMALFHDP_00727	8.86e-117	-	-	-	-	-	-	-	-
JMALFHDP_00728	0.0	aspS	6.1.1.12	-	J	ko:K01876	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
JMALFHDP_00729	5e-311	hisS	6.1.1.21	-	J	ko:K01892	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	histidyl-tRNA synthetase
JMALFHDP_00730	1.37e-94	dtd	-	-	J	ko:K07560	-	ko00000,ko01000,ko03016	rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
JMALFHDP_00731	0.0	relA	2.7.6.5	-	KT	ko:K00951	ko00230,map00230	ko00000,ko00001,ko01000	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
JMALFHDP_00732	4.69e-86	-	-	-	-	-	-	-	-
JMALFHDP_00733	2.03e-221	prmA	-	-	J	ko:K02687	-	ko00000,ko01000,ko03009	Ribosomal protein L11 methyltransferase
JMALFHDP_00734	1.7e-113	ybaK	-	-	S	ko:K03976	-	ko00000,ko01000,ko03016	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
JMALFHDP_00735	2.97e-248	-	-	-	S	-	-	-	Bacterial membrane protein, YfhO
JMALFHDP_00736	0.0	-	-	-	S	-	-	-	Bacterial membrane protein, YfhO
JMALFHDP_00737	0.0	aha1	-	-	P	ko:K12952	-	ko00000,ko01000	E1-E2 ATPase
JMALFHDP_00738	4.36e-242	ansA	3.5.1.1	-	EJ	ko:K01424	ko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110	ko00000,ko00001,ko01000	L-asparaginase, type I
JMALFHDP_00739	0.0	-	-	-	S	-	-	-	Putative threonine/serine exporter
JMALFHDP_00740	5.14e-216	ldh	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	Belongs to the LDH MDH superfamily. LDH family
JMALFHDP_00741	0.0	frdA	1.3.5.4	-	C	ko:K00244	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	ko00000,ko00001,ko00002,ko01000	FAD binding domain
JMALFHDP_00742	0.0	fumC	4.2.1.2	-	C	ko:K01679	ko00020,ko00620,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko04934,ko05200,ko05211,map00020,map00620,map00720,map01100,map01110,map01120,map01130,map01200,map04934,map05200,map05211	ko00000,ko00001,ko00002,ko01000	Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
JMALFHDP_00743	4.95e-124	metI	-	-	P	ko:K02072	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
JMALFHDP_00744	5.3e-241	metN	-	-	P	ko:K02071	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
JMALFHDP_00745	4.69e-200	metQ	-	-	P	ko:K02073	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the nlpA lipoprotein family
JMALFHDP_00746	1.53e-94	-	-	-	L	-	-	-	nuclease
JMALFHDP_00747	1.28e-192	-	-	-	F	ko:K15051	-	ko00000	DNA/RNA non-specific endonuclease
JMALFHDP_00748	1.16e-63	-	-	-	K	-	-	-	Helix-turn-helix domain
JMALFHDP_00749	0.0	ykpA	-	-	S	-	-	-	ABC transporter, ATP-binding protein
JMALFHDP_00750	4.01e-40	-	-	-	S	-	-	-	Sugar efflux transporter for intercellular exchange
JMALFHDP_00751	4.79e-309	eno	4.2.1.11	-	G	ko:K01689	ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066	ko00000,ko00001,ko00002,ko01000,ko03019,ko04147	Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
JMALFHDP_00752	3.46e-130	-	-	-	I	-	-	-	PAP2 superfamily
JMALFHDP_00754	4.19e-202	lysR5	-	-	K	-	-	-	LysR substrate binding domain
JMALFHDP_00755	0.0	-	-	-	P	-	-	-	Cation transporter/ATPase, N-terminus
JMALFHDP_00756	0.0	-	-	-	G	ko:K16211	-	ko00000,ko02000	Major Facilitator
JMALFHDP_00757	5.1e-123	folA	1.5.1.3	-	H	ko:K00287	ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523	ko00000,ko00001,ko00002,ko01000	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
JMALFHDP_00758	3.88e-241	thyA	2.1.1.45	-	F	ko:K00560	ko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523	ko00000,ko00001,ko00002,ko01000	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
JMALFHDP_00759	0.0	cls	-	-	I	ko:K06131	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
JMALFHDP_00760	0.0	potE	-	-	E	-	-	-	Amino Acid
JMALFHDP_00761	2.94e-124	apt	2.4.2.7	-	F	ko:K00759	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000,ko04147	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
JMALFHDP_00762	0.0	recJ	-	-	L	ko:K07462	ko03410,ko03430,ko03440,map03410,map03430,map03440	ko00000,ko00001,ko01000,ko03400	Single-stranded-DNA-specific exonuclease RecJ
JMALFHDP_00763	2.21e-157	srtA	3.4.22.70	-	M	ko:K07284	-	ko00000,ko01000,ko01002,ko01011	sortase family
JMALFHDP_00764	0.0	lepA	-	-	M	ko:K03596	ko05134,map05134	ko00000,ko00001	Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
JMALFHDP_00765	3.33e-250	dnaJ	-	-	O	ko:K03686	-	ko00000,ko03029,ko03110	ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
JMALFHDP_00766	0.0	dnaK	-	-	O	ko:K04043	ko03018,ko04212,ko05152,map03018,map04212,map05152	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	Heat shock 70 kDa protein
JMALFHDP_00767	1.53e-107	grpE	-	-	O	ko:K03687	-	ko00000,ko03029,ko03110	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
JMALFHDP_00768	4.59e-248	hrcA	-	-	K	ko:K03705	-	ko00000,ko03000	Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
JMALFHDP_00769	5.74e-154	-	-	-	S	-	-	-	GyrI-like small molecule binding domain
JMALFHDP_00770	0.0	yjcA	-	-	S	ko:K19350	ko02010,map02010	ko00000,ko00001,ko01504,ko02000	ABC transporter
JMALFHDP_00771	3.52e-225	ribF	2.7.1.26, 2.7.7.2	-	H	ko:K11753	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Belongs to the ribF family
JMALFHDP_00772	5.76e-212	truB	5.4.99.25	-	J	ko:K03177,ko:K03483	-	ko00000,ko01000,ko03000,ko03016	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
JMALFHDP_00773	2.75e-79	rbfA	-	-	J	ko:K02834	-	ko00000,ko03009	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
JMALFHDP_00774	0.0	infB	-	-	J	ko:K02519	-	ko00000,ko03012,ko03029	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
JMALFHDP_00775	2.2e-62	-	-	-	J	-	-	-	ribosomal protein
JMALFHDP_00776	1.04e-60	ylxR	-	-	K	ko:K07742	-	ko00000	Protein of unknown function (DUF448)
JMALFHDP_00777	6.72e-277	nusA	-	-	K	ko:K02600	-	ko00000,ko03009,ko03021	Participates in both transcription termination and antitermination
JMALFHDP_00778	2.63e-106	rimP	-	-	J	ko:K09748	-	ko00000,ko03009	Required for maturation of 30S ribosomal subunits
JMALFHDP_00779	0.0	polC	2.7.7.7	-	L	ko:K03763	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
JMALFHDP_00780	0.0	proS	6.1.1.15	-	J	ko:K01881	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
JMALFHDP_00781	3.14e-293	rseP	-	-	M	ko:K11749	ko02024,ko04112,map02024,map04112	ko00000,ko00001,ko01000,ko01002	zinc metalloprotease
JMALFHDP_00782	7.93e-177	cdsA	2.7.7.41	-	S	ko:K00981	ko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070	ko00000,ko00001,ko00002,ko01000	Belongs to the CDS family
JMALFHDP_00783	3.29e-173	uppS	2.5.1.31	-	H	ko:K00806	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
JMALFHDP_00784	4.76e-119	frr	-	-	J	ko:K02838	-	ko00000,ko03012	Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
JMALFHDP_00785	7.13e-169	pyrH	2.7.4.22	-	F	ko:K09903	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphorylation of UMP to UDP
JMALFHDP_00786	4.15e-234	tsf	-	-	J	ko:K02357	-	ko00000,ko03012,ko03029	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
JMALFHDP_00787	3.06e-180	rpsB	-	-	J	ko:K02967	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uS2 family
JMALFHDP_00788	3.45e-237	yabB	2.1.1.223	-	L	ko:K07461,ko:K15460	-	ko00000,ko01000,ko03016	Methyltransferase small domain
JMALFHDP_00789	1.72e-149	plsC	2.3.1.51	-	I	ko:K00655	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Acyltransferase
JMALFHDP_00790	1.35e-210	cfa	2.1.1.79	-	M	ko:K00574	-	ko00000,ko01000	cyclopropane-fatty-acyl-phospholipid synthase
JMALFHDP_00791	1.59e-52	cfa	2.1.1.79	-	M	ko:K00574	-	ko00000,ko01000	cyclopropane-fatty-acyl-phospholipid synthase
JMALFHDP_00792	0.0	mdlB	-	-	V	ko:K06147,ko:K18890	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
JMALFHDP_00793	0.0	mdlA	-	-	V	ko:K06148,ko:K18889	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
JMALFHDP_00794	9.8e-41	XK26_06720	-	-	S	ko:K09976	-	ko00000	Uncharacterised protein family (UPF0154)
JMALFHDP_00795	2.31e-44	ynzC	-	-	S	-	-	-	UPF0291 protein
JMALFHDP_00796	3.88e-147	lexA	3.4.21.88	-	K	ko:K01356	-	ko00000,ko00002,ko01000,ko01002,ko03400	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
JMALFHDP_00797	1.35e-149	ung2	3.2.2.27	-	L	ko:K21929	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Uracil-DNA glycosylase
JMALFHDP_00798	4.83e-98	apfA	3.6.1.61	-	F	ko:K18445	ko00230,map00230	ko00000,ko00001,ko01000	Nudix hydrolase
JMALFHDP_00799	8.67e-150	sipS3	3.4.21.89	-	U	ko:K03100	ko02024,ko03060,map02024,map03060	ko00000,ko00001,ko01000,ko01002	Belongs to the peptidase S26 family
JMALFHDP_00800	2.61e-76	rplS	-	-	J	ko:K02884	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
JMALFHDP_00801	3.13e-175	trmD	2.1.1.228	-	J	ko:K00554	-	ko00000,ko01000,ko03016	Belongs to the RNA methyltransferase TrmD family
JMALFHDP_00802	2.07e-123	rimM	-	-	J	ko:K02860	-	ko00000,ko03009	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
JMALFHDP_00803	1.37e-59	rpsP	-	-	J	ko:K02959	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Belongs to the bacterial ribosomal protein bS16 family
JMALFHDP_00804	5.44e-289	ffh	3.6.5.4	-	U	ko:K03106	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko01000,ko02044	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
JMALFHDP_00805	2.45e-75	ylxM	-	-	S	ko:K09787	-	ko00000	Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
JMALFHDP_00806	0.0	pepD2	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
JMALFHDP_00807	1.18e-225	ftsY	-	-	U	ko:K03110	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
JMALFHDP_00808	0.0	smc	-	-	D	ko:K03529	-	ko00000,ko03036	Required for chromosome condensation and partitioning
JMALFHDP_00809	6.11e-158	rnc	3.1.26.3	-	J	ko:K03685	ko03008,ko05205,map03008,map05205	ko00000,ko00001,ko01000,ko03009,ko03019,ko03036	Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
JMALFHDP_00810	0.0	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
JMALFHDP_00811	0.0	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
JMALFHDP_00812	2.73e-209	oppC5	-	-	P	ko:K02034	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
JMALFHDP_00813	3.16e-232	oppB	-	-	P	ko:K02033,ko:K02034	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
JMALFHDP_00814	2.91e-229	oppF	-	-	P	ko:K02032	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
JMALFHDP_00815	4.35e-244	oppD	-	-	P	ko:K02031	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
JMALFHDP_00816	6.2e-48	acpP	-	-	IQ	ko:K02078	-	ko00000,ko00001	Carrier of the growing fatty acid chain in fatty acid biosynthesis
JMALFHDP_00817	6.81e-233	plsX	2.3.1.15	-	I	ko:K03621	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
JMALFHDP_00818	0.0	recG	3.6.4.12	-	L	ko:K03655	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
JMALFHDP_00819	0.0	yloV	-	-	S	ko:K07030	-	ko00000	DAK2 domain fusion protein YloV
JMALFHDP_00820	8.29e-75	yloU	-	-	S	-	-	-	Asp23 family, cell envelope-related function
JMALFHDP_00821	9.04e-34	rpmB	-	-	J	ko:K02902	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL28 family
JMALFHDP_00822	3.04e-156	thiN	2.7.6.2	-	H	ko:K00949	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000	thiamine pyrophosphokinase
JMALFHDP_00823	5.27e-154	rpe	5.1.3.1	-	G	ko:K01783	ko00030,ko00040,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the ribulose-phosphate 3-epimerase family
JMALFHDP_00824	7.85e-210	rsgA	3.1.3.100	-	S	ko:K06949	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000,ko03009	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
JMALFHDP_00825	0.0	prkC	2.7.11.1	-	KLT	ko:K08884,ko:K12132	-	ko00000,ko01000,ko01001	serine threonine protein kinase
JMALFHDP_00826	2.6e-180	stp	3.1.3.16	-	T	ko:K20074	-	ko00000,ko01000,ko01009	phosphatase
JMALFHDP_00827	1.74e-307	sun	2.1.1.176	-	J	ko:K03500	-	ko00000,ko01000,ko03009	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
JMALFHDP_00828	9.69e-224	fmt	2.1.2.9	-	J	ko:K00604	ko00670,ko00970,map00670,map00970	ko00000,ko00001,ko01000	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
JMALFHDP_00829	0.0	priA	-	-	L	ko:K04066	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
JMALFHDP_00830	1.63e-43	rpoZ	2.7.7.6	-	K	ko:K03060	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
JMALFHDP_00831	5.97e-145	gmk	2.7.4.8	-	F	ko:K00942	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko00002,ko01000	Essential for recycling GMP and indirectly, cGMP
JMALFHDP_00832	8.55e-64	-	-	-	-	-	-	-	-
JMALFHDP_00833	0.0	recN	-	-	L	ko:K03631	-	ko00000,ko03400	May be involved in recombinational repair of damaged DNA
JMALFHDP_00834	2.52e-197	rrmJ	2.1.1.226, 2.1.1.227	-	J	ko:K06442	-	ko00000,ko01000,ko03009	Ribosomal RNA large subunit methyltransferase J
JMALFHDP_00835	1.46e-205	ispA	2.5.1.1, 2.5.1.10, 2.5.1.29	-	H	ko:K13789	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko01006	Belongs to the FPP GGPP synthase family
JMALFHDP_00836	1.93e-46	xseB	3.1.11.6	-	L	ko:K03602	ko03430,map03430	ko00000,ko00001,ko01000,ko03400	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
JMALFHDP_00837	0.0	xseA	3.1.11.6	-	L	ko:K03601	ko03430,map03430	ko00000,ko00001,ko01000,ko03400	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
JMALFHDP_00838	1.06e-195	folD	1.5.1.5, 3.5.4.9	-	F	ko:K01491	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
JMALFHDP_00839	1.17e-87	nusB	-	-	K	ko:K03625	-	ko00000,ko03009,ko03021	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
JMALFHDP_00840	1.47e-95	WQ51_04310	-	-	S	ko:K10947	-	ko00000,ko03000	Asp23 family, cell envelope-related function
JMALFHDP_00841	6.05e-133	efp	-	-	J	ko:K02356	-	ko00000,ko03012	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
JMALFHDP_00842	1.69e-253	pepP	3.4.11.9, 3.4.13.9	-	E	ko:K01262,ko:K01271	-	ko00000,ko01000,ko01002	Creatinase/Prolidase N-terminal domain
JMALFHDP_00843	9.89e-64	rpmA	-	-	J	ko:K02899	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL27 family
JMALFHDP_00844	1.67e-66	rplU	-	-	J	ko:K02888	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein binds to 23S rRNA in the presence of protein L20
JMALFHDP_00845	7.13e-84	yusI	1.20.4.1	-	P	ko:K00537	-	ko00000,ko01000	Belongs to the ArsC family
JMALFHDP_00846	7.71e-192	-	-	-	S	-	-	-	Uncharacterised 5xTM membrane BCR, YitT family COG1284
JMALFHDP_00847	1.13e-307	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2325)
JMALFHDP_00848	4.08e-18	-	-	-	-	-	-	-	-
JMALFHDP_00849	4.18e-38	dmpI	5.3.2.6	-	G	ko:K01821	ko00362,ko00621,ko00622,ko01100,ko01120,ko01220,map00362,map00621,map00622,map01100,map01120,map01220	ko00000,ko00001,ko00002,ko01000	Belongs to the 4-oxalocrotonate tautomerase family
JMALFHDP_00850	1e-120	-	-	-	S	-	-	-	ECF-type riboflavin transporter, S component
JMALFHDP_00851	6.61e-191	pdxK	2.7.1.35	-	H	ko:K00868	ko00750,ko01100,map00750,map01100	ko00000,ko00001,ko01000	Phosphomethylpyrimidine kinase
JMALFHDP_00852	3.08e-75	-	-	-	-	-	-	-	-
JMALFHDP_00853	2.26e-71	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
JMALFHDP_00854	0.0	-	-	-	S	-	-	-	Predicted membrane protein (DUF2207)
JMALFHDP_00855	4.26e-260	-	-	-	P	-	-	-	Major Facilitator Superfamily
JMALFHDP_00856	1.13e-222	-	-	-	I	-	-	-	Carboxylesterase family
JMALFHDP_00857	3.75e-210	-	-	-	K	-	-	-	helix_turn_helix, arabinose operon control protein
JMALFHDP_00858	1.84e-136	-	-	-	GK	-	-	-	ROK family
JMALFHDP_00859	3.54e-29	-	-	-	GK	-	-	-	ROK family
JMALFHDP_00860	0.0	pepC4	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	Peptidase C1-like family
JMALFHDP_00861	6.93e-81	-	-	-	S	ko:K07006	-	ko00000	Pyridoxamine 5'-phosphate oxidase
JMALFHDP_00862	0.0	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
JMALFHDP_00863	1.88e-101	-	-	-	K	-	-	-	MerR HTH family regulatory protein
JMALFHDP_00864	6.65e-201	ycnB	-	-	U	-	-	-	Belongs to the major facilitator superfamily
JMALFHDP_00865	9.01e-127	ycnB	-	-	U	-	-	-	Belongs to the major facilitator superfamily
JMALFHDP_00866	1.43e-125	-	-	-	S	-	-	-	Domain of unknown function (DUF4811)
JMALFHDP_00867	1.57e-162	pnb	-	-	C	-	-	-	nitroreductase
JMALFHDP_00868	2.83e-286	-	-	-	I	-	-	-	transferase activity, transferring acyl groups other than amino-acyl groups
JMALFHDP_00869	1.26e-139	-	-	-	D	ko:K04095	-	ko00000,ko03036	Fic/DOC family
JMALFHDP_00870	7.05e-95	-	-	-	-	-	-	-	-
JMALFHDP_00871	0.0	glmS	2.6.1.16	-	M	ko:K00820	ko00250,ko00520,ko01100,ko01130,ko04931,map00250,map00520,map01100,map01130,map04931	ko00000,ko00001,ko01000,ko01002	Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
JMALFHDP_00873	1.22e-153	-	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
JMALFHDP_00874	7.44e-183	-	-	-	S	-	-	-	haloacid dehalogenase-like hydrolase
JMALFHDP_00875	0.0	pepN	3.4.11.2	-	E	ko:K01256	ko00480,ko01100,map00480,map01100	ko00000,ko00001,ko01000,ko01002	aminopeptidase
JMALFHDP_00876	5.3e-108	-	-	-	-	-	-	-	-
JMALFHDP_00877	0.0	pepX	3.4.14.11	-	E	ko:K01281	-	ko00000,ko01000,ko01002	Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
JMALFHDP_00878	1.44e-295	sptS	-	-	T	-	-	-	Histidine kinase
JMALFHDP_00879	1.44e-149	dltr	-	-	K	-	-	-	response regulator
JMALFHDP_00880	2.85e-147	-	-	-	T	-	-	-	Region found in RelA / SpoT proteins
JMALFHDP_00881	9.72e-148	ltrA	-	-	S	-	-	-	Bacterial low temperature requirement A protein (LtrA)
JMALFHDP_00882	4.19e-87	-	-	-	O	-	-	-	OsmC-like protein
JMALFHDP_00883	0.0	-	-	-	EM	ko:K05845,ko:K05846	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Periplasmic glycine betaine choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)
JMALFHDP_00884	3.97e-228	proV	-	-	E	ko:K05847	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter, ATP-binding protein
JMALFHDP_00885	6.84e-193	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
JMALFHDP_00886	1.94e-217	galU	2.7.7.9	-	M	ko:K00963	ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	UTP-glucose-1-phosphate uridylyltransferase
JMALFHDP_00887	6.2e-212	rbn	-	-	S	ko:K07058	-	ko00000	Belongs to the UPF0761 family
JMALFHDP_00888	3.47e-206	map	3.4.11.18	-	E	ko:K01265	-	ko00000,ko01000,ko01002	Methionine Aminopeptidase
JMALFHDP_00889	4.75e-101	ykuP	-	-	C	ko:K03839	-	ko00000	Flavodoxin
JMALFHDP_00890	6.32e-113	gtcA1	-	-	S	-	-	-	Teichoic acid glycosylation protein
JMALFHDP_00891	5.23e-274	mnaA	5.1.3.14	-	G	ko:K01791	ko00520,ko01100,ko05111,map00520,map01100,map05111	ko00000,ko00001,ko00002,ko01000,ko01005	Belongs to the UDP-N-acetylglucosamine 2-epimerase family
JMALFHDP_00894	0.0	chbC	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
JMALFHDP_00895	4.3e-275	yfmL	-	-	L	-	-	-	DEAD DEAH box helicase
JMALFHDP_00896	3.55e-176	lys	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
JMALFHDP_00897	6.55e-299	-	-	-	E	ko:K03294	-	ko00000	amino acid
JMALFHDP_00898	1e-131	hpt	2.4.2.8	-	F	ko:K00760	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the purine pyrimidine phosphoribosyltransferase family
JMALFHDP_00899	0.0	yhdP	-	-	S	-	-	-	Transporter associated domain
JMALFHDP_00900	1.62e-170	-	-	-	-	-	-	-	-
JMALFHDP_00901	2.92e-152	-	-	-	C	-	-	-	nitroreductase
JMALFHDP_00902	0.0	xfp	4.1.2.22, 4.1.2.9	-	G	ko:K01621	ko00030,ko00710,ko01100,ko01120,map00030,map00710,map01100,map01120	ko00000,ko00001,ko01000	Phosphoketolase
JMALFHDP_00903	2.27e-177	-	-	-	K	ko:K22103	-	ko00000,ko03000	DeoR C terminal sensor domain
JMALFHDP_00904	4.33e-69	-	-	-	S	-	-	-	Enterocin A Immunity
JMALFHDP_00905	1.14e-170	gntR	-	-	K	-	-	-	UbiC transcription regulator-associated domain protein
JMALFHDP_00906	1.58e-221	rihC	3.2.2.1	-	F	ko:K01239,ko:K01250,ko:K12700	ko00230,ko00760,ko01100,map00230,map00760,map01100	ko00000,ko00001,ko01000	Nucleoside
JMALFHDP_00907	1.82e-162	rpiA	5.3.1.6	-	G	ko:K01807	ko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
JMALFHDP_00908	2.15e-210	rbsK	2.7.1.15	-	H	ko:K00852	ko00030,map00030	ko00000,ko00001,ko01000	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
JMALFHDP_00910	1.15e-109	dps	-	-	P	ko:K04047	-	ko00000,ko03036	Belongs to the Dps family
JMALFHDP_00911	0.0	-	-	-	S	-	-	-	C4-dicarboxylate anaerobic carrier
JMALFHDP_00912	4.1e-152	phoU	-	-	P	ko:K02039	-	ko00000	Plays a role in the regulation of phosphate uptake
JMALFHDP_00913	2.13e-179	pstB1	3.6.3.27	-	P	ko:K02036	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
JMALFHDP_00914	9.06e-189	pstB2	3.6.3.27	-	P	ko:K02036	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
JMALFHDP_00915	2.79e-198	pstA	-	-	P	ko:K02038	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Phosphate transport system permease protein PstA
JMALFHDP_00916	7.19e-216	pstC	-	-	P	ko:K02037	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	probably responsible for the translocation of the substrate across the membrane
JMALFHDP_00917	1.18e-205	pstS	-	-	P	ko:K02040	ko02010,ko02020,ko05152,map02010,map02020,map05152	ko00000,ko00001,ko00002,ko02000	Phosphate
JMALFHDP_00918	3.27e-123	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
JMALFHDP_00919	2.68e-170	glnQ	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
JMALFHDP_00920	0.0	glnPH2	-	-	P	ko:K02029,ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter permease
JMALFHDP_00921	1.07e-204	-	-	-	S	-	-	-	Phospholipase, patatin family
JMALFHDP_00922	0.0	pacL	-	-	P	-	-	-	Cation transporter/ATPase, N-terminus
JMALFHDP_00928	1.73e-44	-	-	-	S	-	-	-	Enterocin A Immunity
JMALFHDP_00929	2.71e-108	mesE	-	-	M	ko:K12293,ko:K20345	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko02000	Transport protein ComB
JMALFHDP_00930	0.0	comA	-	-	V	ko:K06147,ko:K06148,ko:K12292,ko:K20344	ko02010,ko02020,ko02024,map02010,map02020,map02024	ko00000,ko00001,ko01000,ko02000	ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
JMALFHDP_00931	2.17e-75	-	-	-	K	ko:K07707	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko02022	LytTr DNA-binding domain
JMALFHDP_00932	2.22e-46	-	-	-	K	ko:K07707	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko02022	LytTr DNA-binding domain
JMALFHDP_00933	2.04e-146	-	2.7.13.3	-	T	ko:K07706	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	GHKL domain
JMALFHDP_00935	4.72e-258	-	-	-	EGP	-	-	-	Major facilitator superfamily
JMALFHDP_00936	8.89e-144	udk	2.7.1.48	-	F	ko:K00876	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	Cytidine monophosphokinase
JMALFHDP_00940	2.06e-98	-	-	-	S	-	-	-	Putative adhesin
JMALFHDP_00941	7.23e-101	treB	-	-	G	ko:K02755,ko:K02756,ko:K02757	ko02060,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
JMALFHDP_00942	0.0	treB	-	-	G	ko:K02755,ko:K02756,ko:K02757	ko02060,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
JMALFHDP_00943	1.17e-165	treR	-	-	K	ko:K03486	-	ko00000,ko03000	UTRA
JMALFHDP_00944	0.0	treC	3.2.1.93	GH13	G	ko:K01226	ko00500,map00500	ko00000,ko00001,ko01000	Alpha amylase, catalytic domain protein
JMALFHDP_00945	2.03e-44	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
JMALFHDP_00946	2.28e-139	glnP	-	-	P	ko:K10040	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
JMALFHDP_00947	1.5e-142	glnM	-	-	P	ko:K10040	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
JMALFHDP_00948	6.83e-191	peb1A	-	-	ET	ko:K10039	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
JMALFHDP_00949	4.37e-176	glnQ	-	-	E	ko:K10041	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
JMALFHDP_00950	7.39e-187	peb1A	-	-	ET	ko:K10039	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
JMALFHDP_00951	0.0	XK27_09605	-	-	V	ko:K18892	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter transmembrane region
JMALFHDP_00952	4.67e-18	XK27_09605	-	-	V	ko:K18892	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter transmembrane region
JMALFHDP_00953	0.0	XK27_09600	-	-	V	ko:K06147,ko:K18891	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter, ATP-binding protein
JMALFHDP_00954	7.62e-97	-	-	-	K	-	-	-	Transcriptional regulator, MarR family
JMALFHDP_00955	2.29e-196	-	-	-	S	-	-	-	Alpha beta hydrolase
JMALFHDP_00956	2.81e-265	-	-	-	EGP	ko:K08196	-	ko00000,ko02000	Major Facilitator
JMALFHDP_00957	0.0	dtpT	-	-	U	ko:K03305	-	ko00000	amino acid peptide transporter
JMALFHDP_00958	1.1e-30	-	3.2.1.177	GH31	G	ko:K01811	-	ko00000,ko01000	Glycosyl hydrolases family 31
JMALFHDP_00959	1.11e-52	-	3.2.1.177	GH31	G	ko:K01811	-	ko00000,ko01000	Glycosyl hydrolases family 31
JMALFHDP_00960	0.0	-	3.2.1.177	GH31	G	ko:K01811	-	ko00000,ko01000	Glycosyl hydrolases family 31
JMALFHDP_00961	2.22e-231	-	-	-	K	ko:K02529	-	ko00000,ko03000	helix_turn _helix lactose operon repressor
JMALFHDP_00962	0.0	malL	3.2.1.10	GH13	G	ko:K01182	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Alpha amylase, catalytic domain protein
JMALFHDP_00963	2.38e-94	-	2.7.1.191	-	G	ko:K02793	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system fructose IIA component
JMALFHDP_00964	8.6e-194	-	-	-	G	ko:K02796	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	PTS system mannose/fructose/sorbose family IID component
JMALFHDP_00965	1.4e-155	-	-	-	G	ko:K02795	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	PTS system sorbose-specific iic component
JMALFHDP_00966	5.16e-115	-	2.7.1.191	-	G	ko:K02794	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system sorbose subfamily IIB component
JMALFHDP_00968	1.58e-264	pepA	-	-	E	-	-	-	M42 glutamyl aminopeptidase
JMALFHDP_00970	7.11e-103	-	-	-	-	-	-	-	-
JMALFHDP_00971	4.62e-92	rmaE	-	-	K	-	-	-	helix_turn_helix multiple antibiotic resistance protein
JMALFHDP_00972	5.4e-43	-	-	-	-	-	-	-	-
JMALFHDP_00973	3.41e-139	pmrA	-	-	EGP	ko:K08161	-	ko00000,ko02000	MFS_1 like family
JMALFHDP_00974	2.37e-96	pmrA	-	-	EGP	ko:K08161	-	ko00000,ko02000	MFS_1 like family
JMALFHDP_00975	3.37e-142	-	-	-	I	-	-	-	Acid phosphatase homologues
JMALFHDP_00976	9.16e-69	dhaM	2.7.1.121	-	S	ko:K05881	ko00561,map00561	ko00000,ko00001,ko01000,ko02000	PTS system fructose IIA component
JMALFHDP_00977	5.43e-118	dhaL	2.7.1.121	-	S	ko:K05879	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Dak2
JMALFHDP_00978	5.38e-225	dhaK	2.7.1.121	-	G	ko:K05878	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Dak1 domain
JMALFHDP_00979	3.41e-204	glsA	3.5.1.2	-	E	ko:K01425	ko00220,ko00250,ko00471,ko01100,ko04724,ko04727,ko04964,ko05206,ko05230,map00220,map00250,map00471,map01100,map04724,map04727,map04964,map05206,map05230	ko00000,ko00001,ko01000	Belongs to the glutaminase family
JMALFHDP_00980	0.0	-	-	-	P	ko:K03319	-	ko00000	Sodium:sulfate symporter transmembrane region
JMALFHDP_00981	0.0	-	-	-	C	-	-	-	FMN_bind
JMALFHDP_00982	3.6e-209	-	-	-	K	-	-	-	LysR family
JMALFHDP_00983	2.74e-248	-	-	-	S	-	-	-	PFAM Archaeal ATPase
JMALFHDP_00984	0.0	lacG	3.2.1.21, 3.2.1.85	-	G	ko:K01220,ko:K05350	ko00052,ko00460,ko00500,ko00940,ko01100,ko01110,map00052,map00460,map00500,map00940,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
JMALFHDP_00985	0.0	lacE	2.7.1.207	-	G	ko:K02787,ko:K02788	ko00052,ko01100,ko02060,map00052,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphotransferase system, EIIC
JMALFHDP_00986	6.12e-76	lacF	2.7.1.196, 2.7.1.205, 2.7.1.207	-	G	ko:K02759,ko:K02786	ko00052,ko00500,ko01100,ko02060,map00052,map00500,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIA subunit
JMALFHDP_00987	7.71e-192	lacT	-	-	K	ko:K02531	-	ko00000,ko03000	CAT RNA binding domain
JMALFHDP_00988	3.59e-52	-	-	-	-	-	-	-	-
JMALFHDP_00989	0.0	gatC	-	-	G	ko:K20114	ko02060,map02060	ko00000,ko00001,ko00002,ko02000	PTS system sugar-specific permease component
JMALFHDP_00990	6.32e-68	-	2.7.1.204	-	G	ko:K20113	ko02060,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
JMALFHDP_00991	1.71e-111	-	2.7.1.204	-	G	ko:K20112	ko02060,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
JMALFHDP_00992	5.07e-166	-	-	-	S	-	-	-	Domain of unknown function (DUF4867)
JMALFHDP_00993	2.86e-137	-	5.3.1.26	-	G	ko:K01819	ko00052,ko01100,map00052,map01100	ko00000,ko00001,ko01000	Ribose/Galactose Isomerase
JMALFHDP_00994	9.37e-96	lacA	5.3.1.26	-	G	ko:K01819	ko00052,ko01100,map00052,map01100	ko00000,ko00001,ko01000	Ribose/Galactose Isomerase
JMALFHDP_00995	2.2e-174	-	-	-	K	ko:K02530	-	ko00000,ko03000	DeoR C terminal sensor domain
JMALFHDP_00996	7.29e-99	pyrP	-	-	F	ko:K02824	-	ko00000,ko02000	Permease
JMALFHDP_00997	4.31e-189	pyrP	-	-	F	ko:K02824	-	ko00000,ko02000	Permease
JMALFHDP_00998	1.01e-214	-	-	-	S	-	-	-	PFAM Archaeal ATPase
JMALFHDP_00999	3.01e-170	-	-	-	K	-	-	-	Transcriptional regulator
JMALFHDP_01000	7.14e-187	-	-	-	S	-	-	-	hydrolase
JMALFHDP_01001	4.86e-134	-	-	-	S	-	-	-	Protein of unknown function (DUF1440)
JMALFHDP_01002	1.68e-182	-	3.1.3.102, 3.1.3.104	-	S	ko:K20861	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Sucrose-6F-phosphate phosphohydrolase
JMALFHDP_01003	3.68e-101	-	-	-	K	-	-	-	acetyltransferase
JMALFHDP_01004	0.0	-	4.2.1.53	-	S	ko:K10254	-	ko00000,ko01000	Myosin-crossreactive antigen
JMALFHDP_01005	3.75e-92	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
JMALFHDP_01006	0.0	qacA	-	-	EGP	-	-	-	Major Facilitator
JMALFHDP_01007	0.0	qacA	-	-	EGP	-	-	-	Major Facilitator
JMALFHDP_01008	6.63e-188	glpF	-	-	U	ko:K02440	-	ko00000,ko02000	Belongs to the MIP aquaporin (TC 1.A.8) family
JMALFHDP_01009	4.96e-174	-	-	-	S	ko:K07052	-	ko00000	CAAX amino terminal protease
JMALFHDP_01010	2.23e-210	-	-	-	S	ko:K07088	-	ko00000	Membrane transport protein
JMALFHDP_01011	3.32e-114	tag	3.2.2.20	-	L	ko:K01246	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	glycosylase
JMALFHDP_01012	4.55e-242	-	-	-	S	-	-	-	Bacteriocin helveticin-J
JMALFHDP_01013	7.92e-299	bglH	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Glycosyl hydrolase family 1
JMALFHDP_01014	1.03e-293	-	-	-	G	ko:K02755,ko:K02756,ko:K02757	ko02060,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
JMALFHDP_01015	2.27e-48	-	-	-	K	-	-	-	Helix-turn-helix domain, rpiR family
JMALFHDP_01016	4.35e-108	ytsP	1.8.4.14	-	T	ko:K08968	ko00270,map00270	ko00000,ko00001,ko01000	GAF domain-containing protein
JMALFHDP_01017	8.35e-139	ylbE	-	-	GM	-	-	-	NAD(P)H-binding
JMALFHDP_01018	2.07e-163	-	-	-	F	-	-	-	Glutamine amidotransferase class-I
JMALFHDP_01019	6.13e-123	hpt	2.4.2.8	-	F	ko:K00760	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the purine pyrimidine phosphoribosyltransferase family
JMALFHDP_01021	4.63e-74	-	-	-	S	-	-	-	Antibiotic biosynthesis monooxygenase
JMALFHDP_01022	1.79e-68	-	-	-	K	ko:K03827	-	ko00000,ko01000	Acetyltransferase (GNAT) domain
JMALFHDP_01023	7.3e-62	-	-	-	-	-	-	-	-
JMALFHDP_01024	3.12e-220	fba	4.1.2.13, 4.1.2.29	-	G	ko:K01624,ko:K03339	ko00010,ko00030,ko00051,ko00562,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00562,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Fructose-1,6-bisphosphate aldolase, class II
JMALFHDP_01025	0.0	argS	6.1.1.19	-	J	ko:K01887	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Arginyl-tRNA synthetase
JMALFHDP_01026	1.13e-219	dacA	3.4.16.4	-	M	ko:K07258	ko00550,ko01100,map00550,map01100	ko00000,ko00001,ko01000,ko01002,ko01011	Belongs to the peptidase S11 family
JMALFHDP_01027	1.14e-160	-	-	-	M	-	-	-	ErfK YbiS YcfS YnhG
JMALFHDP_01028	4.04e-187	nnrD	4.2.1.136, 5.1.99.6	-	H	ko:K17758,ko:K17759	-	ko00000,ko01000	Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
JMALFHDP_01029	1.46e-160	-	-	-	-	-	-	-	-
JMALFHDP_01030	8.31e-275	-	-	-	I	-	-	-	Protein of unknown function (DUF2974)
JMALFHDP_01031	0.0	ytgP	-	-	S	ko:K03328	-	ko00000	Polysaccharide biosynthesis protein
JMALFHDP_01032	0.0	leuS	6.1.1.4	-	J	ko:K01869	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Belongs to the class-I aminoacyl-tRNA synthetase family
JMALFHDP_01033	9.31e-148	yodM	3.6.1.27	-	I	ko:K19302	ko00550,map00550	ko00000,ko00001,ko01000,ko01011	Acid phosphatase homologues
JMALFHDP_01034	1.16e-181	mdr	-	-	EGP	-	-	-	Major Facilitator
JMALFHDP_01035	1.21e-101	mdr	-	-	EGP	-	-	-	Major Facilitator
JMALFHDP_01036	3.1e-276	metK	2.5.1.6	-	H	ko:K00789	ko00270,ko01100,ko01110,ko01230,map00270,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
JMALFHDP_01041	2.37e-79	yugI	-	-	J	ko:K07570	-	ko00000	general stress protein
JMALFHDP_01042	8.83e-230	yumC	1.18.1.2, 1.19.1.1	-	C	ko:K21567	-	ko00000,ko01000	Ferredoxin--NADP reductase
JMALFHDP_01043	1.45e-151	dedA	-	-	S	ko:K03975	-	ko00000	SNARE-like domain protein
JMALFHDP_01044	1.1e-134	-	-	-	S	-	-	-	Protein of unknown function (DUF1461)
JMALFHDP_01045	1.98e-189	nagD	3.1.3.41	-	G	ko:K01101	ko00627,ko01120,map00627,map01120	ko00000,ko00001,ko01000	Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
JMALFHDP_01046	3.4e-126	yutD	-	-	S	-	-	-	Protein of unknown function (DUF1027)
JMALFHDP_01047	0.0	sasH	3.1.3.5, 3.1.3.6, 3.1.4.16, 3.6.1.45	-	F	ko:K01081,ko:K01119,ko:K07004,ko:K08693,ko:K11751	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the 5'-nucleotidase family
JMALFHDP_01048	3.99e-74	-	-	-	-	-	-	-	-
JMALFHDP_01049	0.0	-	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	glycerophosphoryl diester phosphodiesterase
JMALFHDP_01050	0.0	pepV	3.5.1.18	-	E	ko:K01270,ko:K01274,ko:K01439	ko00300,ko00480,ko01100,ko01120,ko01230,map00300,map00480,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000,ko01002	dipeptidase PepV
JMALFHDP_01051	0.0	pbp1B	2.4.1.129	GT51	M	ko:K03693,ko:K12551	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01003,ko01011	Penicillin binding protein transpeptidase domain
JMALFHDP_01052	5.92e-228	ccpA	-	-	K	ko:K02529	-	ko00000,ko03000	catabolite control protein A
JMALFHDP_01053	8.89e-270	pepQ	3.4.13.9	-	E	ko:K01271	-	ko00000,ko01000,ko01002	Creatinase/Prolidase N-terminal domain
JMALFHDP_01054	1.47e-67	-	-	-	-	-	-	-	-
JMALFHDP_01055	2.54e-33	ytxG	-	-	S	-	-	-	protein containing a divergent version of the methyl-accepting chemotaxis-like domain
JMALFHDP_01056	1.88e-197	ykuT	-	-	M	ko:K16052,ko:K22044	-	ko00000,ko02000	mechanosensitive ion channel
JMALFHDP_01057	1.33e-274	ackA	2.7.2.1	-	F	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
JMALFHDP_01058	9.51e-148	rdgB	3.6.1.66	-	F	ko:K02428	ko00230,map00230	ko00000,ko00001,ko01000	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
JMALFHDP_01059	2.69e-185	murI	3.6.1.66, 5.1.1.3	-	M	ko:K01776,ko:K02428	ko00230,ko00471,ko01100,map00230,map00471,map01100	ko00000,ko00001,ko01000,ko01011	Provides the (R)-glutamate required for cell wall biosynthesis
JMALFHDP_01060	2.57e-90	yslB	-	-	S	-	-	-	Protein of unknown function (DUF2507)
JMALFHDP_01061	6.29e-71	trxA	-	-	O	ko:K03671	ko04621,ko05418,map04621,map05418	ko00000,ko00001,ko03110	Belongs to the thioredoxin family
JMALFHDP_01062	0.0	mutS2	-	-	L	ko:K07456	ko03430,map03430	ko00000,ko00001,ko03400	Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
JMALFHDP_01063	1.33e-118	cvpA	-	-	S	-	-	-	Colicin V production protein
JMALFHDP_01064	1.27e-66	yrzB	-	-	S	-	-	-	Belongs to the UPF0473 family
JMALFHDP_01065	1.18e-94	yrrK	-	-	J	ko:K07447	-	ko00000,ko01000	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
JMALFHDP_01066	1.08e-56	yrzL	-	-	S	-	-	-	Belongs to the UPF0297 family
JMALFHDP_01067	0.0	alaS	6.1.1.7	-	J	ko:K01872	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
JMALFHDP_01068	1.05e-296	cshB	3.6.4.13	-	JKL	ko:K05592,ko:K18692	ko03018,map03018	ko00000,ko00001,ko01000,ko03009,ko03019	DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
JMALFHDP_01069	5.74e-233	nrnA	3.1.13.3, 3.1.3.7	-	S	ko:K06881	ko00920,ko01100,ko01120,map00920,map01100,map01120	ko00000,ko00001,ko01000,ko03400	DHHA1 domain protein
JMALFHDP_01070	4.21e-266	dinB	2.7.7.7	-	L	ko:K02346	-	ko00000,ko01000,ko03400	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
JMALFHDP_01071	0.0	zwf	1.1.1.363, 1.1.1.49	-	G	ko:K00036	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,ko05230,map00030,map00480,map01100,map01110,map01120,map01130,map01200,map05230	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
JMALFHDP_01072	1.54e-53	yajC	-	-	U	ko:K03210	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Preprotein translocase
JMALFHDP_01073	1.64e-239	ruvB	3.6.4.12	-	L	ko:K03551	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
JMALFHDP_01074	1.26e-131	ruvA	3.6.4.12	-	L	ko:K03550	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
JMALFHDP_01075	0.0	mutL	-	-	L	ko:K03572	ko03430,map03430	ko00000,ko00001,ko03400	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
JMALFHDP_01076	0.0	mutS	-	-	L	ko:K03555	ko03430,map03430	ko00000,ko00001,ko03400	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
JMALFHDP_01077	0.0	nisT	-	-	V	ko:K06147,ko:K20485	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko02000	ABC transporter
JMALFHDP_01078	1.96e-144	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
JMALFHDP_01079	0.0	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
JMALFHDP_01080	0.0	groL	-	-	O	ko:K04077	ko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
JMALFHDP_01081	3.69e-59	groS	-	-	O	ko:K04078	-	ko00000,ko03029,ko03110	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
JMALFHDP_01084	1.65e-12	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
JMALFHDP_01085	1.31e-165	-	-	-	S	-	-	-	membrane
JMALFHDP_01086	1.05e-102	-	-	-	K	-	-	-	LytTr DNA-binding domain
JMALFHDP_01087	8.61e-131	-	3.2.2.10	-	S	ko:K06966	ko00230,ko00240,map00230,map00240	ko00000,ko00001,ko01000	Belongs to the LOG family
JMALFHDP_01088	1.45e-150	rex	-	-	K	ko:K01926	-	ko00000,ko03000	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
JMALFHDP_01089	0.0	ydiF	-	-	S	ko:K06158	-	ko00000,ko03012	ABC transporter, ATP-binding protein
JMALFHDP_01090	4.95e-293	bbsF_1	2.8.3.19	-	C	ko:K18702	-	ko00000,ko01000	Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
JMALFHDP_01092	1.07e-93	apfA	3.6.1.61	-	F	ko:K18445	ko00230,map00230	ko00000,ko00001,ko01000	NUDIX domain
JMALFHDP_01093	6.38e-130	-	-	-	L	-	-	-	oxidized base lesion DNA N-glycosylase activity
JMALFHDP_01094	4.54e-16	-	-	-	L	-	-	-	oxidized base lesion DNA N-glycosylase activity
JMALFHDP_01095	5.18e-59	-	-	-	-	-	-	-	-
JMALFHDP_01096	4.45e-311	purB	4.3.2.2	-	F	ko:K01756	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
JMALFHDP_01097	0.0	purA	6.3.4.4	-	F	ko:K01939	ko00230,ko00250,ko01100,map00230,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
JMALFHDP_01098	3.46e-241	guaC	1.7.1.7	-	F	ko:K00364	ko00230,map00230	ko00000,ko00001,ko01000	Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
JMALFHDP_01099	8.96e-304	eriC	-	-	P	ko:K03281	-	ko00000	chloride
JMALFHDP_01100	4.78e-248	tsaD	2.3.1.234	-	J	ko:K01409	-	ko00000,ko01000,ko03016	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
JMALFHDP_01101	9.85e-127	rimI	2.3.1.128	-	K	ko:K03789	-	ko00000,ko01000,ko03009	Ribosomal-protein-alanine acetyltransferase
JMALFHDP_01102	2.9e-168	yeaZ	2.3.1.234	-	O	ko:K01409,ko:K14742	-	ko00000,ko01000,ko03016	Universal bacterial protein YeaZ
JMALFHDP_01103	1.07e-113	-	-	-	S	-	-	-	ECF transporter, substrate-specific component
JMALFHDP_01104	3.36e-164	fat	3.1.2.21	-	I	ko:K01071	ko00061,ko01100,map00061,map01100	ko00000,ko00001,ko01000,ko01004	Acyl-ACP thioesterase
JMALFHDP_01105	4.86e-198	rsmI	2.1.1.198	-	H	ko:K07056	-	ko00000,ko01000,ko03009	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
JMALFHDP_01106	1.12e-76	yabA	-	-	L	-	-	-	Involved in initiation control of chromosome replication
JMALFHDP_01107	8.05e-197	holB	2.7.7.7	-	L	ko:K02341	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III
JMALFHDP_01108	1.66e-69	yaaQ	-	-	S	-	-	-	Cyclic-di-AMP receptor
JMALFHDP_01109	1.18e-145	tmk	2.7.4.9	-	F	ko:K00943	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
JMALFHDP_01110	3.68e-45	-	-	-	S	-	-	-	Protein of unknown function (DUF2508)
JMALFHDP_01111	1.78e-139	recR	-	-	L	ko:K06187	ko03440,map03440	ko00000,ko00001,ko03400	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
JMALFHDP_01112	9.41e-69	yaaK	-	-	S	ko:K09747	-	ko00000	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
JMALFHDP_01113	0.0	dnaX	2.7.7.7	-	L	ko:K02343	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
JMALFHDP_01114	2.52e-106	tadA	3.5.4.33	-	F	ko:K11991	-	ko00000,ko01000,ko03016	Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
JMALFHDP_01115	6.96e-33	-	-	-	-	-	-	-	-
JMALFHDP_01116	4.34e-143	rsmC	2.1.1.172	-	J	ko:K00564	-	ko00000,ko01000,ko03009	Methyltransferase
JMALFHDP_01117	3.25e-44	-	-	-	-	-	-	-	-
JMALFHDP_01118	3.4e-197	-	-	-	P	ko:K10716	-	ko00000,ko02000	Ion transport protein
JMALFHDP_01119	3.25e-72	rplL	-	-	J	ko:K02935	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
JMALFHDP_01120	2.35e-126	rplJ	-	-	J	ko:K02864	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
JMALFHDP_01121	3.14e-183	aatB	-	-	ET	ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter substrate-binding protein
JMALFHDP_01122	2.14e-148	glnQ	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	ABC transporter
JMALFHDP_01123	2.18e-139	yecS_2	-	-	P	ko:K02029,ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter permease
JMALFHDP_01124	6.1e-160	rplA	-	-	J	ko:K02863	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
JMALFHDP_01125	2.69e-90	rplK	-	-	J	ko:K02867	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
JMALFHDP_01126	2.58e-131	nusG	-	-	K	ko:K02601	-	ko00000,ko03009,ko03021	Participates in transcription elongation, termination and antitermination
JMALFHDP_01127	9.78e-18	secE	-	-	U	ko:K03073	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
JMALFHDP_01128	1.48e-27	rpmG	-	-	J	ko:K02913	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL33 family
JMALFHDP_01129	3.04e-54	-	-	-	S	-	-	-	CAAX protease self-immunity
JMALFHDP_01131	2.63e-240	hepT	2.5.1.30, 2.5.1.83	-	H	ko:K00805,ko:K21275	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	Belongs to the FPP GGPP synthase family
JMALFHDP_01133	9.67e-291	-	-	-	G	-	-	-	Major Facilitator Superfamily
JMALFHDP_01134	0.0	dxs	2.2.1.7	-	H	ko:K01662	ko00730,ko00900,ko01100,ko01110,ko01130,map00730,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
JMALFHDP_01135	4.49e-259	glxK	2.7.1.165	-	G	ko:K00865	ko00260,ko00561,ko00630,ko01100,ko01120,ko01130,map00260,map00561,map00630,map01100,map01120,map01130	ko00000,ko00001,ko01000	Belongs to the glycerate kinase type-1 family
JMALFHDP_01136	0.0	gntK	2.7.1.12	-	G	ko:K00851	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko01000	Belongs to the FGGY kinase family
JMALFHDP_01137	5.9e-46	-	-	-	-	-	-	-	-
JMALFHDP_01138	3.71e-83	-	-	-	K	ko:K03091	-	ko00000,ko03021	sigma factor activity
JMALFHDP_01139	7.16e-27	-	-	-	K	ko:K03091	-	ko00000,ko03021	sigma factor activity
JMALFHDP_01140	0.0	lacG	3.2.1.21, 3.2.1.85	-	G	ko:K01220,ko:K05350	ko00052,ko00460,ko00500,ko00940,ko01100,ko01110,map00052,map00460,map00500,map00940,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
JMALFHDP_01141	0.0	lacE	2.7.1.207	-	G	ko:K02787,ko:K02788	ko00052,ko01100,ko02060,map00052,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphotransferase system, EIIC
JMALFHDP_01142	5.42e-75	lacF	2.7.1.196, 2.7.1.205, 2.7.1.207	-	G	ko:K02759,ko:K02786	ko00052,ko00500,ko01100,ko02060,map00052,map00500,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIA subunit
JMALFHDP_01143	1.44e-195	lacT	-	-	K	ko:K02531	-	ko00000,ko03000	PRD domain
JMALFHDP_01144	1.62e-179	trmH	2.1.1.185	-	J	ko:K03218	-	ko00000,ko01000,ko03009	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
JMALFHDP_01145	2.73e-102	mrnC	-	-	J	ko:K11145	-	ko00000,ko01000,ko03009	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
JMALFHDP_01146	0.0	cysS	6.1.1.16	-	J	ko:K01883	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-I aminoacyl-tRNA synthetase family
JMALFHDP_01147	0.0	gltX	6.1.1.24	-	J	ko:K09698	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
JMALFHDP_01148	0.0	radA	-	-	O	ko:K04485	-	ko00000,ko03400	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
JMALFHDP_01149	7.41e-131	dut	3.6.1.23	-	F	ko:K01520	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	dUTP diphosphatase
JMALFHDP_01150	0.0	pepC	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	Peptidase C1-like family
JMALFHDP_01151	6.92e-236	-	-	-	S	-	-	-	AAA domain
JMALFHDP_01152	4.28e-163	gpmA1	5.4.2.11	-	G	ko:K01834	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
JMALFHDP_01153	1.89e-35	-	-	-	-	-	-	-	-
JMALFHDP_01154	7.63e-56	-	-	-	-	-	-	-	-
JMALFHDP_01155	5.88e-199	-	-	-	P	ko:K16264	-	ko00000,ko02000	cation diffusion facilitator family transporter
JMALFHDP_01156	1.12e-69	czrA	-	-	K	ko:K22043	-	ko00000,ko03000	Transcriptional regulator, ArsR family
JMALFHDP_01157	7.46e-165	-	-	-	G	-	-	-	Belongs to the phosphoglycerate mutase family
JMALFHDP_01158	7.33e-141	-	3.5.1.124	-	S	ko:K03152	-	ko00000,ko01000,ko01002	DJ-1/PfpI family
JMALFHDP_01159	1.71e-204	-	-	-	GM	-	-	-	NmrA-like family
JMALFHDP_01160	1.16e-68	-	-	-	-	-	-	-	-
JMALFHDP_01161	7.96e-85	rpsI	-	-	J	ko:K02996	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uS9 family
JMALFHDP_01162	7.82e-102	rplM	-	-	J	ko:K02871	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
JMALFHDP_01163	8.78e-195	truA	5.4.99.12	-	J	ko:K06173	-	ko00000,ko01000,ko03016	Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
JMALFHDP_01164	6.27e-180	ecfT	-	-	U	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
JMALFHDP_01165	3.08e-207	ecfA2	-	-	P	ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
JMALFHDP_01166	4.49e-200	ecfA1	-	-	P	ko:K16786	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
JMALFHDP_01167	1.91e-81	rplQ	-	-	J	ko:K02879	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L17
JMALFHDP_01168	3.62e-218	rpoA	2.7.7.6	-	K	ko:K03040	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
JMALFHDP_01169	4.46e-81	rpsK	-	-	J	ko:K02948	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
JMALFHDP_01170	1.92e-73	rpsM	-	-	J	ko:K02952	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
JMALFHDP_01171	1.89e-21	rpmJ	-	-	J	ko:K02919	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL36 family
JMALFHDP_01172	4.46e-46	infA	-	-	J	ko:K02518	-	ko00000,ko03012	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
JMALFHDP_01173	4.87e-155	adk	2.7.4.3	-	F	ko:K00939	ko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
JMALFHDP_01174	3.44e-299	secY	-	-	U	ko:K03076	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
JMALFHDP_01175	5.78e-92	rplO	-	-	J	ko:K02876	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to the 23S rRNA
JMALFHDP_01176	3.44e-33	rpmD	-	-	J	ko:K02907	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L30
JMALFHDP_01177	9.33e-107	rpsE	-	-	J	ko:K02988	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
JMALFHDP_01178	1.09e-74	rplR	-	-	J	ko:K02881	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
JMALFHDP_01179	6.14e-122	rplF	-	-	J	ko:K02933	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
JMALFHDP_01180	1.32e-88	rpsH	-	-	J	ko:K02994	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
JMALFHDP_01181	1.73e-40	rpsN	-	-	J	ko:K02954	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
JMALFHDP_01182	4.3e-124	rplE	-	-	J	ko:K02931	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
JMALFHDP_01183	1.67e-46	rplX	-	-	J	ko:K02895	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
JMALFHDP_01184	6.02e-78	rplN	-	-	J	ko:K02874	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
JMALFHDP_01185	7.74e-56	rpsQ	-	-	J	ko:K02961	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
JMALFHDP_01186	2.92e-34	rpmC	-	-	J	ko:K02904	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uL29 family
JMALFHDP_01187	4.26e-98	rplP	-	-	J	ko:K02878	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
JMALFHDP_01188	3.04e-156	rpsC	-	-	J	ko:K02982	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
JMALFHDP_01189	9.07e-73	rplV	-	-	J	ko:K02890	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
JMALFHDP_01190	6.08e-63	rpsS	-	-	J	ko:K02965	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
JMALFHDP_01191	4.01e-198	rplB	-	-	J	ko:K02886	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
JMALFHDP_01192	7.29e-61	rplW	-	-	J	ko:K02892	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
JMALFHDP_01193	3.16e-136	rplD	-	-	J	ko:K02926	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the polypeptide exit tunnel
JMALFHDP_01194	5.06e-144	rplC	-	-	J	ko:K02906	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
JMALFHDP_01195	6.34e-66	rpsJ	-	-	J	ko:K02946	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Involved in the binding of tRNA to the ribosomes
JMALFHDP_01196	0.0	fusA	-	-	J	ko:K02355	-	ko00000,ko03012,ko03029	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
JMALFHDP_01197	1.14e-105	rpsG	-	-	J	ko:K02992	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
JMALFHDP_01198	3.6e-92	rpsL	-	-	J	ko:K02950	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
JMALFHDP_01199	1.28e-154	comC	3.4.23.43	-	NOU	ko:K02236	-	ko00000,ko00002,ko01000,ko02044	Bacterial Peptidase A24 N-terminal domain
JMALFHDP_01200	0.0	rpoC	2.7.7.6	-	K	ko:K03046	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
JMALFHDP_01201	0.0	rpoB	2.7.7.6	-	K	ko:K03043	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
JMALFHDP_01202	0.0	clpC	-	-	O	ko:K03696	ko01100,map01100	ko00000,ko03110	Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
JMALFHDP_01205	0.0	lysS	6.1.1.6	-	J	ko:K04567	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-II aminoacyl-tRNA synthetase family
JMALFHDP_01206	2.17e-242	dus	-	-	J	ko:K05540	-	ko00000,ko01000,ko03016	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
JMALFHDP_01207	1.86e-204	hslO	-	-	O	ko:K04083	-	ko00000,ko03110	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
JMALFHDP_01208	0.0	-	-	-	S	-	-	-	membrane
JMALFHDP_01209	0.0	ftsH	-	-	O	ko:K03798	-	ko00000,ko00002,ko01000,ko01002,ko03110	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
JMALFHDP_01210	6.6e-313	tilS	2.4.2.8, 6.3.4.19	-	J	ko:K04075,ko:K15780	ko00230,ko01100,ko01110,map00230,map01100,map01110	ko00000,ko00001,ko01000,ko03016	Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
JMALFHDP_01211	3.27e-80	-	-	-	J	ko:K07571	-	ko00000	S1 RNA binding domain
JMALFHDP_01212	5.29e-78	divIC	-	-	D	ko:K13052	-	ko00000,ko03036	Septum formation initiator
JMALFHDP_01213	8.68e-47	yabO	-	-	J	-	-	-	S4 domain protein
JMALFHDP_01214	0.0	mfd	-	-	L	ko:K03723	ko03420,map03420	ko00000,ko00001,ko01000,ko03400	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
JMALFHDP_01215	2.21e-133	pth	3.1.1.29	-	J	ko:K01056	-	ko00000,ko01000,ko03012	The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
JMALFHDP_01216	4.66e-231	ldh	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	Belongs to the LDH MDH superfamily. LDH family
JMALFHDP_01217	3.16e-160	-	-	-	S	-	-	-	(CBS) domain
JMALFHDP_01218	6.86e-278	alr	5.1.1.1, 5.1.1.5	-	E	ko:K01775,ko:K20707	ko00473,ko01100,ko01502,map00473,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
JMALFHDP_01219	1.44e-78	acpS	2.7.8.7	-	I	ko:K00997	ko00770,map00770	ko00000,ko00001,ko01000	Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
JMALFHDP_01220	0.0	cshA	3.6.4.13	-	F	ko:K05592	ko03018,map03018	ko00000,ko00001,ko01000,ko03009,ko03019	DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
JMALFHDP_01221	0.0	murF	6.3.2.10	-	M	ko:K01929	ko00300,ko00550,ko01100,ko01502,map00300,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
JMALFHDP_01222	1.28e-54	rpmE	-	-	J	ko:K02909	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L31
JMALFHDP_01223	0.0	-	-	-	E	-	-	-	amino acid
JMALFHDP_01224	1.27e-173	XK27_08845	-	-	S	ko:K05833	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
JMALFHDP_01225	1.2e-182	XK27_08840	-	-	U	ko:K05832	-	ko00000,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
JMALFHDP_01226	6.15e-240	ABC-SBP	-	-	S	ko:K01989	-	ko00000,ko00002,ko02000	ABC transporter
JMALFHDP_01227	0.0	rafA	3.2.1.22	-	G	ko:K07407	ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603	ko00000,ko00001,ko01000	alpha-galactosidase
JMALFHDP_01228	4.14e-206	rafA	3.2.1.22	-	G	ko:K07407	ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603	ko00000,ko00001,ko01000	alpha-galactosidase
JMALFHDP_01229	2.12e-292	glyA	2.1.2.1	-	E	ko:K00600	ko00260,ko00460,ko00630,ko00670,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko01523,map00260,map00460,map00630,map00670,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map01523	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
JMALFHDP_01230	0.0	pepDA	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
JMALFHDP_01231	0.0	melA	3.2.1.22	-	G	ko:K07407	ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603	ko00000,ko00001,ko01000	alpha-galactosidase
JMALFHDP_01232	0.0	lacP	-	-	G	ko:K11104,ko:K16209	-	ko00000,ko02000	Transporter
JMALFHDP_01233	7.36e-127	lacR	-	-	K	-	-	-	helix_turn_helix, arabinose operon control protein
JMALFHDP_01234	1.58e-100	-	-	-	-	-	-	-	-
JMALFHDP_01235	2.75e-100	-	-	-	S	ko:K11621	ko02020,map02020	ko00000,ko00001	Putative adhesin
JMALFHDP_01236	2.9e-278	-	4.2.1.11	-	G	ko:K01689	ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066	ko00000,ko00001,ko00002,ko01000,ko03019,ko04147	Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
JMALFHDP_01237	1.64e-52	-	-	-	-	-	-	-	-
JMALFHDP_01238	9.92e-266	ywkB	-	-	S	ko:K07088	-	ko00000	Membrane transport protein
JMALFHDP_01239	0.0	spxB	1.2.3.3, 1.2.5.1, 2.2.1.6, 4.1.1.8	-	EH	ko:K00156,ko:K00158,ko:K01577,ko:K01652	ko00290,ko00620,ko00630,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00620,map00630,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the TPP enzyme family
JMALFHDP_01240	0.0	frc	2.8.3.16	-	C	ko:K07749	-	ko00000,ko01000	Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
JMALFHDP_01241	1.97e-123	-	-	-	-	-	-	-	-
JMALFHDP_01242	5.47e-97	ogt	2.1.1.63	-	L	ko:K00567	-	ko00000,ko01000,ko03400	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
JMALFHDP_01243	8.18e-44	-	-	-	S	-	-	-	Domain of unknown function (DUF4160)
JMALFHDP_01244	7.88e-44	-	-	-	-	-	-	-	-
JMALFHDP_01246	7.55e-85	doc	-	-	S	ko:K07341	-	ko00000,ko02048	Fic/DOC family
JMALFHDP_01247	7.98e-50	-	-	-	-	-	-	-	-
JMALFHDP_01248	1.4e-217	-	-	-	K	-	-	-	Helix-turn-helix
JMALFHDP_01250	0.0	guaA	6.3.5.2	-	F	ko:K01951	ko00230,ko00983,ko01100,map00230,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko01002	Catalyzes the synthesis of GMP from XMP
JMALFHDP_01251	4.46e-163	-	-	-	K	-	-	-	DNA-binding helix-turn-helix protein
JMALFHDP_01252	3.23e-134	xpt	2.4.2.22	-	F	ko:K03816	ko00230,ko01100,ko01110,map00230,map01100,map01110	ko00000,ko00001,ko01000	Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
JMALFHDP_01253	8.85e-303	pbuX	-	-	F	ko:K03458,ko:K16169	-	ko00000,ko02000	xanthine permease
JMALFHDP_01254	6.24e-306	murA	2.5.1.7	-	M	ko:K00790	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
JMALFHDP_01255	0.0	pyrG	6.3.4.2	-	F	ko:K01937	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
JMALFHDP_01256	3.78e-92	rpoE	-	-	K	ko:K03048	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko03021,ko03400	Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
JMALFHDP_01257	1.93e-95	-	-	-	S	-	-	-	Domain of unknown function (DUF1934)
JMALFHDP_01258	0.0	-	-	-	S	ko:K06885	-	ko00000	Metal dependent phosphohydrolases with conserved 'HD' motif.
JMALFHDP_01259	0.0	dexB	3.2.1.70	-	G	ko:K01215	-	ko00000,ko01000	Alpha amylase, catalytic domain protein
JMALFHDP_01260	4.16e-199	malG	-	-	P	ko:K15772	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
JMALFHDP_01261	0.0	malF	-	-	P	ko:K15771	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
JMALFHDP_01262	1.58e-293	malE	-	-	G	ko:K15770	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding protein
JMALFHDP_01263	4.76e-269	msmX	-	-	P	ko:K10112	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
JMALFHDP_01264	1.81e-147	pgmB	5.4.2.6	-	S	ko:K01838	ko00500,map00500	ko00000,ko00001,ko01000	beta-phosphoglucomutase
JMALFHDP_01265	0.0	mapA	2.4.1.8	GH65	G	ko:K00691	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	hydrolase, family 65, central catalytic
JMALFHDP_01266	0.0	nplT	3.2.1.133, 3.2.1.135, 3.2.1.54	GH13	G	ko:K01208	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 13 family
JMALFHDP_01267	0.0	malA1	3.2.1.10, 3.2.1.20	GH13,GH31	G	ko:K01182,ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Alpha amylase, catalytic domain
JMALFHDP_01268	1.05e-227	yvdE	-	-	K	-	-	-	helix_turn _helix lactose operon repressor
JMALFHDP_01269	9.21e-223	prs	2.7.6.1	-	F	ko:K00948	ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
JMALFHDP_01270	5.41e-316	glmU	2.3.1.157, 2.7.7.23	-	M	ko:K04042	ko00520,ko01100,ko01130,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
JMALFHDP_01271	1.57e-195	purR	-	-	F	ko:K09685	-	ko00000,ko03000	pur operon repressor
JMALFHDP_01272	2.99e-49	veg	-	-	S	-	-	-	Biofilm formation stimulator VEG
JMALFHDP_01273	5.91e-205	ksgA	2.1.1.182	-	J	ko:K02528	-	ko00000,ko01000,ko03009	Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
JMALFHDP_01274	1.6e-127	rnmV	3.1.26.8	-	J	ko:K05985	-	ko00000,ko01000	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
JMALFHDP_01275	4e-187	tatD	-	-	L	ko:K03424	-	ko00000,ko01000	hydrolase, TatD family
JMALFHDP_01276	0.0	metG	6.1.1.10	-	J	ko:K01874	ko00450,ko00970,map00450,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
JMALFHDP_01277	8.83e-116	mgtA	3.6.3.2	-	P	ko:K01531	-	ko00000,ko01000	COG0474 Cation transport ATPase
JMALFHDP_01278	2.95e-127	-	-	-	S	ko:K06872	-	ko00000	TPM domain
JMALFHDP_01279	6.82e-119	comEB	3.5.4.12	-	F	ko:K01493	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko02044	MafB19-like deaminase
JMALFHDP_01280	4.73e-246	trpS	6.1.1.2	-	J	ko:K01867	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-I aminoacyl-tRNA synthetase family
JMALFHDP_01281	1.36e-145	-	-	-	E	-	-	-	Belongs to the SOS response-associated peptidase family
JMALFHDP_01283	1.05e-146	-	-	-	-	-	-	-	-
JMALFHDP_01284	1.17e-196	ypbG	2.7.1.2	-	GK	ko:K00845	ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	ROK family
JMALFHDP_01285	0.0	pbg6	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
JMALFHDP_01286	0.0	pts23C	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
JMALFHDP_01287	3.44e-70	ptcB	2.7.1.196, 2.7.1.205	-	G	ko:K02760	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
JMALFHDP_01288	1.05e-36	-	-	-	-	-	-	-	-
JMALFHDP_01289	1.76e-68	-	2.7.1.196, 2.7.1.205	-	G	ko:K02759	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose Cellobiose specific IIA subunit
JMALFHDP_01290	3.68e-171	-	-	-	K	ko:K03492	-	ko00000,ko03000	UTRA
JMALFHDP_01291	0.0	-	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
JMALFHDP_01292	2.61e-76	-	-	-	S	-	-	-	Domain of unknown function (DUF3284)
JMALFHDP_01293	7.73e-164	gntR	-	-	K	ko:K03489	-	ko00000,ko03000	UTRA
JMALFHDP_01294	8.73e-314	celD	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
JMALFHDP_01295	2.95e-105	-	-	-	-	-	-	-	-
JMALFHDP_01296	0.0	pbg4	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
JMALFHDP_01297	1.34e-95	-	-	-	O	ko:K13993	ko04141,map04141	ko00000,ko00001,ko03110	Belongs to the small heat shock protein (HSP20) family
JMALFHDP_01298	1.4e-100	greA	-	-	K	ko:K03624	-	ko00000,ko03021	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
JMALFHDP_01299	8.46e-81	-	-	-	-	-	-	-	-
JMALFHDP_01300	0.0	pepE	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	aminopeptidase
JMALFHDP_01301	3.68e-54	-	-	-	K	-	-	-	sequence-specific DNA binding
JMALFHDP_01302	1.2e-155	ypgQ	-	-	S	ko:K06950	-	ko00000	Metal dependent phosphohydrolases with conserved 'HD' motif.
JMALFHDP_01303	0.0	pepC1	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	aminopeptidase
JMALFHDP_01305	8.83e-307	tyrS	6.1.1.1	-	J	ko:K01866	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
JMALFHDP_01306	0.0	XK27_08315	-	-	M	-	-	-	Sulfatase
JMALFHDP_01307	1.32e-144	plsY1	2.3.1.15	-	I	ko:K08591	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
JMALFHDP_01308	2.69e-259	brpA	-	-	K	-	-	-	Cell envelope-like function transcriptional attenuator common domain protein
JMALFHDP_01309	1.73e-218	-	-	-	G	-	-	-	Aldose 1-epimerase
JMALFHDP_01310	1.28e-194	-	-	-	U	ko:K05340	-	ko00000,ko02000	sugar transport
JMALFHDP_01311	2.76e-149	-	-	-	-	-	-	-	-
JMALFHDP_01312	1.56e-227	yfdH	-	GT2	M	ko:K12999	-	ko00000,ko01000,ko01003,ko01005	Glycosyltransferase, group 2 family protein
JMALFHDP_01313	5.36e-92	-	-	-	S	-	-	-	GtrA-like protein
JMALFHDP_01314	1.26e-55	rpsN	-	-	J	ko:K02954	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
JMALFHDP_01315	4.36e-58	-	-	-	V	-	-	-	Abi-like protein
JMALFHDP_01316	1.11e-171	gpmA	5.4.2.11	-	G	ko:K01834	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
JMALFHDP_01317	2.22e-97	XK27_04775	-	-	S	ko:K09155	-	ko00000	PAS domain
JMALFHDP_01318	6.61e-191	-	-	-	-	-	-	-	-
JMALFHDP_01319	2.63e-169	-	-	-	-	-	-	-	-
JMALFHDP_01320	2.39e-227	-	-	-	S	-	-	-	Oxidoreductase family, NAD-binding Rossmann fold
JMALFHDP_01321	0.0	yjbQ	-	-	P	ko:K03455,ko:K03499	-	ko00000,ko02000	TrkA C-terminal domain protein
JMALFHDP_01322	2.55e-185	-	2.7.1.56	-	G	ko:K00882	ko00051,map00051	ko00000,ko00001,ko01000	pfkB family carbohydrate kinase
JMALFHDP_01323	6.8e-223	lysA2	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
JMALFHDP_01324	3.06e-70	lysA2	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
JMALFHDP_01325	0.0	-	-	-	NU	-	-	-	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
JMALFHDP_01326	3.38e-46	-	-	-	S	-	-	-	Protein of unknown function (DUF2922)
JMALFHDP_01327	1.44e-38	-	-	-	-	-	-	-	-
JMALFHDP_01328	8.46e-162	-	-	-	-	-	-	-	-
JMALFHDP_01329	1.06e-95	-	-	-	-	-	-	-	-
JMALFHDP_01330	0.0	kup	-	-	P	ko:K03549	-	ko00000,ko02000	Transport of potassium into the cell
JMALFHDP_01331	0.0	kup	-	-	P	ko:K03549	-	ko00000,ko02000	Transport of potassium into the cell
JMALFHDP_01332	0.0	pckA	4.1.1.49	-	H	ko:K01610	ko00010,ko00020,ko00620,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00710,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Phosphoenolpyruvate carboxykinase
JMALFHDP_01333	0.0	-	-	-	S	-	-	-	Bacterial membrane protein, YfhO
JMALFHDP_01334	0.0	pepO	-	-	O	ko:K07386	-	ko00000,ko01000,ko01002	Peptidase family M13
JMALFHDP_01335	0.0	fruC	2.7.1.202	-	GT	ko:K02769,ko:K02770	ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
JMALFHDP_01336	4.33e-208	fruK-1	2.7.1.56	-	H	ko:K00882	ko00051,map00051	ko00000,ko00001,ko01000	pfkB family carbohydrate kinase
JMALFHDP_01337	9.83e-175	rpl	-	-	K	-	-	-	Helix-turn-helix domain, rpiR family
JMALFHDP_01338	8.27e-258	-	-	-	D	-	-	-	transport
JMALFHDP_01339	2.21e-236	lacD	4.1.2.40	-	G	ko:K01635	ko00052,ko01100,ko02024,map00052,map01100,map02024	ko00000,ko00001,ko01000	Belongs to the aldolase LacD family
JMALFHDP_01340	2.19e-290	yqjV	-	-	EGP	-	-	-	Major Facilitator Superfamily
JMALFHDP_01341	0.0	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
JMALFHDP_01342	0.0	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
JMALFHDP_01343	1.25e-282	XK27_04775	-	-	S	ko:K09155	-	ko00000	PAS domain
JMALFHDP_01344	3.55e-132	yitW	-	-	S	-	-	-	Iron-sulfur cluster assembly protein
JMALFHDP_01345	3.57e-176	nrdG	1.97.1.4	-	O	ko:K04068	-	ko00000,ko01000	Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
JMALFHDP_01346	0.0	nrdD	1.1.98.6	-	F	ko:K21636	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Ribonucleoside-triphosphate reductase
JMALFHDP_01347	1.18e-76	-	-	-	-	-	-	-	-
JMALFHDP_01348	0.0	yxbA	6.3.1.12	-	S	ko:K17810	-	ko00000,ko01000	ATP-grasp enzyme
JMALFHDP_01349	0.0	asnB	6.3.5.4	-	E	ko:K01953	ko00250,ko01100,ko01110,map00250,map01100,map01110	ko00000,ko00001,ko01000,ko01002	Asparagine synthase
JMALFHDP_01350	0.0	-	-	-	S	-	-	-	Calcineurin-like phosphoesterase
JMALFHDP_01351	2.84e-106	-	-	-	-	-	-	-	-
JMALFHDP_01352	8.69e-189	-	-	-	P	ko:K02042	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
JMALFHDP_01353	1e-168	phnB	-	-	P	ko:K02042	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
JMALFHDP_01354	2.58e-181	phnC	3.6.3.28	-	P	ko:K02041	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
JMALFHDP_01355	9.2e-215	phnD	-	-	P	ko:K02044	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Phosphonate ABC transporter
JMALFHDP_01357	4.96e-113	usp5	-	-	T	-	-	-	universal stress protein
JMALFHDP_01358	3.56e-191	-	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Tyrosine phosphatase family
JMALFHDP_01359	2.99e-161	-	-	-	K	-	-	-	UTRA domain
JMALFHDP_01360	1.68e-128	-	2.7.1.200, 2.7.1.204	-	G	ko:K02773,ko:K20112	ko00052,ko01100,ko02060,map00052,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
JMALFHDP_01361	1.1e-113	ntd	2.4.2.6	-	F	ko:K08728	ko00240,map00240	ko00000,ko00001,ko01000	Nucleoside
JMALFHDP_01362	6.65e-239	-	-	-	-	-	-	-	-
JMALFHDP_01363	9.99e-269	-	-	-	S	-	-	-	zinc-ribbon domain
JMALFHDP_01364	1.98e-21	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
JMALFHDP_01365	1.87e-88	-	2.7.1.191	-	G	ko:K02793	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system fructose IIA component
JMALFHDP_01366	6.12e-190	-	-	-	G	ko:K02796	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	PTS system mannose/fructose/sorbose family IID component
JMALFHDP_01367	1.87e-196	-	-	-	G	ko:K02795	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	PTS system sorbose-specific iic component
JMALFHDP_01368	5.59e-109	-	2.7.1.191	-	G	ko:K02794	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system sorbose subfamily IIB component
JMALFHDP_01369	2.64e-291	nagA	3.5.1.25	-	G	ko:K01443	ko00520,ko01130,map00520,map01130	ko00000,ko00001,ko01000	Belongs to the metallo-dependent hydrolases superfamily. NagA family
JMALFHDP_01370	3.39e-275	agaS	-	-	G	ko:K02082	-	ko00000,ko01000	SIS domain
JMALFHDP_01371	8.33e-167	-	-	-	K	ko:K03710	-	ko00000,ko03000	UTRA
JMALFHDP_01372	0.0	-	-	-	G	-	-	-	Belongs to the glycosyl hydrolase 31 family
JMALFHDP_01373	1.99e-195	-	-	-	I	-	-	-	alpha/beta hydrolase fold
JMALFHDP_01374	4.63e-155	yibF	-	-	S	-	-	-	overlaps another CDS with the same product name
JMALFHDP_01375	3.17e-236	yibE	-	-	S	-	-	-	overlaps another CDS with the same product name
JMALFHDP_01376	0.0	nhaP3	-	-	P	ko:K03316	-	ko00000	Sodium proton antiporter
JMALFHDP_01377	4.18e-151	-	-	-	-	-	-	-	-
JMALFHDP_01378	8.97e-263	ddl	6.3.2.4	-	F	ko:K01921	ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Belongs to the D-alanine--D-alanine ligase family
JMALFHDP_01379	0.0	-	-	-	S	-	-	-	Cysteine-rich secretory protein family
JMALFHDP_01380	9.88e-179	-	-	-	-	-	-	-	-
JMALFHDP_01381	9.72e-147	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
JMALFHDP_01382	8.27e-307	aapA	-	-	E	ko:K03293,ko:K11737	-	ko00000,ko02000	Amino acid permease
JMALFHDP_01383	2.07e-26	-	-	-	S	-	-	-	CAAX protease self-immunity
JMALFHDP_01384	3.64e-209	-	-	-	S	-	-	-	CAAX protease self-immunity
JMALFHDP_01385	3.01e-228	prs2	2.7.6.1	-	F	ko:K00948	ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
JMALFHDP_01386	7.97e-82	-	-	-	-	-	-	-	-
JMALFHDP_01387	2.32e-159	-	-	-	S	-	-	-	Alpha/beta hydrolase family
JMALFHDP_01388	2.74e-204	-	-	-	M	-	-	-	Glycosyltransferase like family 2
JMALFHDP_01389	4.75e-219	-	-	-	S	-	-	-	Protein of unknown function (DUF1002)
JMALFHDP_01390	2.23e-186	rnhA	3.1.26.4	-	L	ko:K03469	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
JMALFHDP_01391	2.39e-225	-	-	-	S	-	-	-	Alpha/beta hydrolase of unknown function (DUF915)
JMALFHDP_01392	7.36e-159	yugP	-	-	S	ko:K06973	-	ko00000	Putative neutral zinc metallopeptidase
JMALFHDP_01393	0.0	cls	-	-	I	ko:K06131	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
JMALFHDP_01394	7.71e-104	-	-	-	-	-	-	-	-
JMALFHDP_01395	1.75e-171	cobB	-	-	K	ko:K12410	-	ko00000,ko01000	SIR2 family
JMALFHDP_01396	5.26e-123	adaB	2.1.1.63	-	L	ko:K00567,ko:K10778,ko:K13531	-	ko00000,ko01000,ko03000,ko03400	6-O-methylguanine DNA methyltransferase, DNA binding domain
JMALFHDP_01397	8.8e-168	terC	-	-	P	-	-	-	Integral membrane protein TerC family
JMALFHDP_01398	1.75e-83	yeaO	-	-	S	-	-	-	Protein of unknown function, DUF488
JMALFHDP_01399	9.36e-135	yxlJ	3.2.2.21	-	L	ko:K03652	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Belongs to the DNA glycosylase MPG family
JMALFHDP_01400	0.0	XK27_05795	-	-	P	ko:K17073,ko:K17074	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
JMALFHDP_01401	7.38e-177	glnQ	-	-	E	ko:K17076	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
JMALFHDP_01402	7.83e-208	-	-	-	L	-	-	-	HNH nucleases
JMALFHDP_01403	1.11e-154	yfbR	-	-	S	ko:K07023	-	ko00000	HD containing hydrolase-like enzyme
JMALFHDP_01404	1.22e-269	-	-	-	G	-	-	-	Glycosyl hydrolases family 8
JMALFHDP_01405	1.37e-307	-	-	-	M	-	-	-	Glycosyl transferase
JMALFHDP_01407	1.24e-196	-	-	-	-	-	-	-	-
JMALFHDP_01408	1.14e-23	-	-	-	-	-	-	-	-
JMALFHDP_01409	6.45e-91	-	-	-	S	-	-	-	Iron-sulphur cluster biosynthesis
JMALFHDP_01410	2.31e-240	ysdE	-	-	P	-	-	-	Citrate transporter
JMALFHDP_01411	3.64e-123	lemA	-	-	S	ko:K03744	-	ko00000	LemA family
JMALFHDP_01412	2.25e-188	htpX	-	-	O	ko:K03799	-	ko00000,ko00002,ko01000,ko01002	Belongs to the peptidase M48B family
JMALFHDP_01413	2.75e-216	-	-	-	K	-	-	-	helix_turn_helix, arabinose operon control protein
JMALFHDP_01414	3.01e-124	ykoE	-	-	S	ko:K16925	-	ko00000,ko00002,ko02000	ABC-type cobalt transport system, permease component
JMALFHDP_01415	0.0	-	-	-	S	ko:K16786,ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
JMALFHDP_01416	1.04e-140	-	-	-	P	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Cobalt transport protein
JMALFHDP_01417	3.66e-108	rlmH	2.1.1.177	-	J	ko:K00783	-	ko00000,ko01000,ko03009	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
JMALFHDP_01418	1.72e-262	htrA	3.4.21.107	-	O	ko:K04771	ko01503,ko02020,map01503,map02020	ko00000,ko00001,ko00002,ko01000,ko01002,ko03110	serine protease
JMALFHDP_01419	7.48e-192	vicX	3.1.26.11	-	S	ko:K00784	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	domain protein
JMALFHDP_01420	2.69e-189	yycI	-	-	S	-	-	-	YycH protein
JMALFHDP_01421	0.0	yycH	-	-	S	-	-	-	YycH protein
JMALFHDP_01422	0.0	vicK	2.7.13.3	-	T	ko:K07652	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
JMALFHDP_01423	3.03e-167	yycF	-	-	K	ko:K07668	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	response regulator
JMALFHDP_01426	1.52e-193	-	-	-	I	-	-	-	Acyl-transferase
JMALFHDP_01427	9.16e-202	arbx	-	-	M	-	-	-	Glycosyl transferase family 8
JMALFHDP_01428	1.19e-232	-	-	-	M	-	-	-	Glycosyl transferase family 8
JMALFHDP_01429	1.7e-234	-	-	-	M	-	-	-	Glycosyl transferase family 8
JMALFHDP_01430	4.74e-210	arbZ	-	-	I	-	-	-	Phosphate acyltransferases
JMALFHDP_01431	1.75e-297	-	-	-	P	-	-	-	Major Facilitator Superfamily
JMALFHDP_01432	7.37e-316	-	-	-	P	-	-	-	Major Facilitator Superfamily
JMALFHDP_01433	8.41e-235	-	3.5.1.24	-	M	ko:K01442	ko00120,ko00121,ko01100,map00120,map00121,map01100	ko00000,ko00001,ko01000	Linear amide C-N hydrolases, choloylglycine hydrolase family
JMALFHDP_01434	3.39e-124	-	-	-	S	-	-	-	Peptidase propeptide and YPEB domain
JMALFHDP_01435	3.4e-228	pepR	3.4.11.5	-	E	ko:K01259	ko00330,map00330	ko00000,ko00001,ko01000,ko01002	Releases the N-terminal proline from various substrates
JMALFHDP_01436	1.24e-170	menG	2.1.1.163, 2.1.1.201	-	H	ko:K03183	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
JMALFHDP_01437	4.45e-309	brnQ	-	-	U	ko:K03311	-	ko00000	Component of the transport system for branched-chain amino acids
JMALFHDP_01438	0.0	-	1.3.5.4	-	C	ko:K00244	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	ko00000,ko00001,ko00002,ko01000	FAD binding domain
JMALFHDP_01439	2.05e-133	-	-	-	K	-	-	-	LysR substrate binding domain
JMALFHDP_01440	1.09e-52	-	-	-	K	-	-	-	LysR substrate binding domain
JMALFHDP_01441	0.0	-	-	-	E	ko:K20265	ko02024,map02024	ko00000,ko00001,ko02000	amino acid
JMALFHDP_01442	0.0	-	-	-	M	-	-	-	domain protein
JMALFHDP_01443	0.0	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
JMALFHDP_01444	0.0	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
JMALFHDP_01445	0.0	-	-	-	S	-	-	-	domain, Protein
JMALFHDP_01446	1.69e-162	-	-	-	S	-	-	-	domain, Protein
JMALFHDP_01447	1.71e-246	ldhA	1.1.1.28	-	C	ko:K03778,ko:K18347	ko00620,ko01120,ko01502,ko02020,map00620,map01120,map01502,map02020	ko00000,ko00001,ko00002,ko01000,ko01504	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
JMALFHDP_01448	1.04e-134	-	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase
JMALFHDP_01449	1.08e-269	guaB	1.1.1.205	-	F	ko:K00088	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
JMALFHDP_01450	1.69e-312	-	1.8.1.7	-	C	ko:K00383	ko00480,ko04918,map00480,map04918	ko00000,ko00001,ko01000	pyridine nucleotide-disulfide oxidoreductase
JMALFHDP_01451	1.36e-227	ydbI	-	-	K	-	-	-	AI-2E family transporter
JMALFHDP_01452	7.39e-54	-	-	-	-	-	-	-	-
JMALFHDP_01453	8.07e-202	-	-	-	S	-	-	-	Alpha beta hydrolase
JMALFHDP_01454	0.0	-	-	-	L	-	-	-	Helicase C-terminal domain protein
JMALFHDP_01455	5.32e-206	xth	3.1.11.2	-	L	ko:K01142	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	exodeoxyribonuclease III
JMALFHDP_01456	3.69e-54	-	-	-	S	-	-	-	Transglycosylase associated protein
JMALFHDP_01457	3.18e-19	-	-	-	S	-	-	-	CsbD-like
JMALFHDP_01458	3.18e-210	-	-	-	P	ko:K03284	-	ko00000,ko02000	CorA-like Mg2+ transporter protein
JMALFHDP_01459	0.0	fusA1	-	-	J	-	-	-	elongation factor G
JMALFHDP_01460	1.92e-26	-	-	-	-	-	-	-	-
JMALFHDP_01461	4.16e-196	yitS	-	-	S	-	-	-	EDD domain protein, DegV family
JMALFHDP_01462	9.12e-178	ysaA	3.1.3.5, 3.8.1.2	-	S	ko:K01560,ko:K07025,ko:K08723	ko00230,ko00240,ko00361,ko00625,ko00760,ko01100,ko01110,ko01120,map00230,map00240,map00361,map00625,map00760,map01100,map01110,map01120	ko00000,ko00001,ko01000	Haloacid dehalogenase-like hydrolase
JMALFHDP_01463	6.35e-168	-	-	-	S	-	-	-	Protein of unknown function (DUF975)
JMALFHDP_01464	6.39e-150	-	-	-	S	ko:K07118	-	ko00000	NAD(P)H-binding
JMALFHDP_01465	9.06e-279	-	-	-	S	-	-	-	Sterol carrier protein domain
JMALFHDP_01467	1.1e-127	ydhF	-	-	S	-	-	-	Aldo keto reductase
JMALFHDP_01468	3.19e-106	ydhF	-	-	S	-	-	-	Aldo keto reductase
JMALFHDP_01469	1.7e-117	-	-	-	S	-	-	-	Protein of unknown function (DUF3278)
JMALFHDP_01470	7.49e-29	-	-	-	K	ko:K07729	-	ko00000,ko03000	Helix-turn-helix XRE-family like proteins
JMALFHDP_01471	9.47e-144	-	-	-	S	-	-	-	HAD hydrolase, family IA, variant
JMALFHDP_01473	2.64e-151	-	-	-	S	ko:K07507	-	ko00000,ko02000	MgtC family
JMALFHDP_01474	0.0	-	-	-	-	-	-	-	-
JMALFHDP_01475	2.62e-279	-	-	-	I	-	-	-	Protein of unknown function (DUF2974)
JMALFHDP_01476	1.73e-216	scrK	2.7.1.4	-	GK	ko:K00847	ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100	ko00000,ko00001,ko01000	ROK family
JMALFHDP_01477	0.0	dnaB	3.6.4.12	-	L	ko:K02314	ko03030,ko04112,map03030,map04112	ko00000,ko00001,ko01000,ko03032	Participates in initiation and elongation during chromosome replication
JMALFHDP_01478	2.33e-98	rplI	-	-	J	ko:K02939	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to the 23S rRNA
JMALFHDP_01479	0.0	yybT	-	-	T	-	-	-	signaling protein consisting of a modified GGDEF domain and a DHH domain
JMALFHDP_01480	2.26e-213	corA	-	-	P	ko:K03284	-	ko00000,ko02000	CorA-like Mg2+ transporter protein
JMALFHDP_01481	1.33e-47	rpsR	-	-	J	ko:K02963	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
JMALFHDP_01482	7.47e-112	ssb	-	-	L	ko:K03111	ko03030,ko03430,ko03440,map03030,map03430,map03440	ko00000,ko00001,ko03029,ko03032,ko03400	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
JMALFHDP_01483	4.55e-64	rpsF	-	-	J	ko:K02990	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Binds together with S18 to 16S ribosomal RNA
JMALFHDP_01484	0.0	gyrA	5.99.1.3	-	L	ko:K02469	-	ko00000,ko01000,ko03032,ko03400	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
JMALFHDP_01485	0.0	gyrB	5.99.1.3	-	L	ko:K02470	-	ko00000,ko01000,ko03032,ko03400	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
JMALFHDP_01486	3.07e-264	recF	-	-	L	ko:K03629	ko03440,map03440	ko00000,ko00001,ko03400	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
JMALFHDP_01487	1.04e-27	yaaA	-	-	S	ko:K14761	-	ko00000,ko03009	S4 domain
JMALFHDP_01488	5.95e-263	dnaN	2.7.7.7	-	L	ko:K02338	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
JMALFHDP_01489	0.0	dnaA	-	-	L	ko:K02313	ko02020,ko04112,map02020,map04112	ko00000,ko00001,ko03032,ko03036	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
JMALFHDP_01490	6.59e-23	rpmH	-	-	J	ko:K02914	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL34 family
JMALFHDP_01491	3.62e-79	rnpA	3.1.26.5	-	J	ko:K03536	-	ko00000,ko01000,ko03016	RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
JMALFHDP_01492	1.7e-201	yidC	-	-	U	ko:K03217	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044,ko03029	Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
JMALFHDP_01493	0.0	mnmE	-	-	S	ko:K03650	-	ko00000,ko01000,ko03016	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
JMALFHDP_01494	0.0	gidA	-	-	D	ko:K03495	-	ko00000,ko03016,ko03036	NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
JMALFHDP_01495	0.0	pox1	1.2.3.3	-	EH	ko:K00158	ko00620,ko01100,map00620,map01100	ko00000,ko00001,ko01000	Belongs to the TPP enzyme family
JMALFHDP_01496	0.0	gnd	1.1.1.343, 1.1.1.44	-	H	ko:K00033	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
JMALFHDP_01497	3.41e-226	licC	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
JMALFHDP_01498	5.26e-92	-	-	-	S	-	-	-	haloacid dehalogenase-like hydrolase
JMALFHDP_01499	2.7e-198	M1-530	-	-	S	-	-	-	Protein of unknown function (DUF4127)
JMALFHDP_01500	3.32e-77	-	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase
JMALFHDP_01501	1.14e-90	-	-	-	K	-	-	-	Helix-turn-helix domain, rpiR family
JMALFHDP_01502	0.0	eriC	-	-	P	ko:K03281	-	ko00000	chloride
JMALFHDP_01503	4.18e-136	pncA	-	-	Q	-	-	-	Isochorismatase family
JMALFHDP_01504	3.51e-308	-	-	-	EGP	ko:K08368	-	ko00000,ko02000	Sugar (and other) transporter
JMALFHDP_01505	1.9e-233	-	-	-	L	ko:K07497	-	ko00000	COG2963 Transposase and inactivated derivatives
JMALFHDP_01506	9.35e-135	-	-	-	-	-	-	-	-
JMALFHDP_01507	6.62e-148	crp2	-	-	K	ko:K10914,ko:K21562	ko02020,ko02024,ko02025,ko02026,ko05111,map02020,map02024,map02025,map02026,map05111	ko00000,ko00001,ko03000	helix_turn_helix, cAMP Regulatory protein
JMALFHDP_01508	2.88e-251	-	-	-	P	ko:K06147,ko:K06148	-	ko00000,ko02000	ABC transporter
JMALFHDP_01509	1.35e-247	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
JMALFHDP_01510	0.0	mutS1	-	-	L	ko:K07456	ko03430,map03430	ko00000,ko00001,ko03400	Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
JMALFHDP_01511	5.8e-83	-	-	-	S	-	-	-	Iron-sulphur cluster biosynthesis
JMALFHDP_01512	3.43e-298	-	-	-	EGP	ko:K08368	-	ko00000,ko02000	Sugar (and other) transporter
JMALFHDP_01513	1.17e-91	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
JMALFHDP_01514	1.61e-313	ynbB	-	-	P	-	-	-	aluminum resistance
JMALFHDP_01515	0.0	speA	4.1.1.17, 4.1.1.18, 4.1.1.19	-	E	ko:K01581,ko:K01582,ko:K01585	ko00310,ko00330,ko00480,ko00960,ko01100,ko01110,ko01130,map00310,map00330,map00480,map00960,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Orn/Lys/Arg decarboxylase, C-terminal domain
JMALFHDP_01516	0.0	-	-	-	E	-	-	-	Amino acid permease
JMALFHDP_01517	0.0	pepO	-	-	O	ko:K07386	-	ko00000,ko01000,ko01002	Peptidase family M13
JMALFHDP_01518	1.44e-196	ywdE	-	-	K	ko:K20375	ko02024,map02024	ko00000,ko00001,ko03000	Helix-turn-helix XRE-family like proteins
JMALFHDP_01519	0.0	copA	3.6.3.3, 3.6.3.5, 3.6.3.54	-	P	ko:K01534,ko:K17686	ko01524,ko04016,map01524,map04016	ko00000,ko00001,ko01000	P-type ATPase
JMALFHDP_01520	1.81e-64	-	-	-	S	-	-	-	Cupredoxin-like domain
JMALFHDP_01521	9.51e-81	-	-	-	S	-	-	-	Cupredoxin-like domain
JMALFHDP_01522	5.52e-96	atkY	-	-	K	ko:K02171	ko01501,map01501	ko00000,ko00001,ko00002,ko01504,ko03000	Penicillinase repressor
JMALFHDP_01523	3.3e-110	-	-	-	-	-	-	-	-
JMALFHDP_01524	1.07e-96	-	-	-	K	ko:K03484	-	ko00000,ko03000	Periplasmic binding protein domain
JMALFHDP_01525	5.02e-280	gtfA	2.4.1.7	GH13	G	ko:K00690	ko00500,map00500	ko00000,ko00001,ko01000	Sucrose glucosyltransferase
JMALFHDP_01526	4.44e-265	-	-	-	G	ko:K02756,ko:K02757	ko02060,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
JMALFHDP_01527	1.84e-86	def2	3.5.1.88	-	J	ko:K01462	-	ko00000,ko01000	Removes the formyl group from the N-terminal Met of newly synthesized proteins
JMALFHDP_01528	1.87e-36	-	-	-	K	-	-	-	Bacteriophage CI repressor helix-turn-helix domain
JMALFHDP_01529	5.29e-293	pbuG	-	-	S	ko:K06901	-	ko00000,ko02000	permease
JMALFHDP_01530	2.24e-27	-	-	-	I	-	-	-	bis(5'-adenosyl)-triphosphatase activity
JMALFHDP_01531	6.42e-293	pbuG	-	-	S	ko:K06901	-	ko00000,ko02000	permease
JMALFHDP_01532	1.76e-120	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
JMALFHDP_01534	2.69e-294	pbuG	-	-	S	ko:K06901	-	ko00000,ko02000	permease
JMALFHDP_01535	2.41e-302	lctO	1.13.12.4	-	C	ko:K00467,ko:K10530	ko00620,map00620	ko00000,ko00001,ko01000	L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases
JMALFHDP_01536	4.15e-162	dgk2	2.7.1.76	-	F	ko:K10353	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000	deoxynucleoside kinase
JMALFHDP_01537	2.41e-152	dak	2.7.1.76	-	F	ko:K10353	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000	deoxynucleoside kinase
JMALFHDP_01538	1.04e-171	nagB	3.5.99.6	-	G	ko:K02564	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
JMALFHDP_01539	4.91e-204	-	-	-	S	-	-	-	Aldo/keto reductase family
JMALFHDP_01540	2.44e-25	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
JMALFHDP_01541	6.5e-190	-	2.7.1.191	-	K	ko:K02745,ko:K02794,ko:K10984	ko00051,ko00052,ko00520,ko01100,ko02060,map00051,map00052,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system sorbose subfamily IIB component
JMALFHDP_01542	1.69e-134	-	-	-	G	ko:K02746,ko:K10985	ko00052,ko02060,map00052,map02060	ko00000,ko00001,ko00002,ko02000	PTS system sorbose-specific iic component
JMALFHDP_01543	9.76e-157	agaD	-	-	G	ko:K02747,ko:K02796,ko:K10986	ko00051,ko00052,ko00520,ko01100,ko02060,map00051,map00052,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	PTS system mannose/fructose/sorbose family IID component
JMALFHDP_01544	1.08e-35	-	-	-	G	ko:K02744	ko00052,ko02060,map00052,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system fructose IIA component
JMALFHDP_01545	1.87e-170	-	-	-	S	ko:K07090	-	ko00000	membrane transporter protein
JMALFHDP_01546	9.65e-195	murQ	4.2.1.126	-	G	ko:K07106	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
JMALFHDP_01547	1.18e-168	-	3.5.2.6	-	V	ko:K17836	ko00311,ko01130,ko01501,map00311,map01130,map01501	ko00000,ko00001,ko00002,ko01000,ko01504	Beta-lactamase enzyme family
JMALFHDP_01548	8.15e-243	ykfB	5.1.1.20	-	M	ko:K19802	-	ko00000,ko01000	Belongs to the mandelate racemase muconate lactonizing enzyme family
JMALFHDP_01549	3.18e-108	XK27_11925	-	-	V	-	-	-	Beta-lactamase
JMALFHDP_01550	3.29e-68	-	2.7.1.191	-	G	ko:K02794	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system sorbose subfamily IIB component
JMALFHDP_01551	2.42e-152	-	-	-	G	ko:K02796	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	PTS system mannose/fructose/sorbose family IID component
JMALFHDP_01552	2.78e-127	XK27_08455	-	-	G	ko:K02795	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	PTS system sorbose-specific iic component
JMALFHDP_01554	2.05e-189	nagZ	3.2.1.52	-	G	ko:K01207	ko00520,ko00531,ko01100,ko01501,map00520,map00531,map01100,map01501	ko00000,ko00001,ko00002,ko01000	Glycosyl hydrolase family 3 N terminal domain
JMALFHDP_01555	2.24e-219	-	3.4.11.5	-	I	ko:K01259	ko00330,map00330	ko00000,ko00001,ko01000,ko01002	Releases the N-terminal proline from various substrates
JMALFHDP_01556	4.27e-251	tcsA	-	-	S	ko:K02058,ko:K07335	-	ko00000,ko00002,ko02000	ABC transporter substrate-binding protein PnrA-like
JMALFHDP_01557	2.85e-214	phnD	-	-	P	ko:K02044	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter, phosphonate, periplasmic substrate-binding protein
JMALFHDP_01558	6.8e-221	menA	2.5.1.74	-	H	ko:K02548	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01006	1,4-dihydroxy-2-naphthoate
JMALFHDP_01559	0.0	cydD	-	-	CO	ko:K16012	ko02010,map02010	ko00000,ko00001,ko02000	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
JMALFHDP_01560	0.0	cydC	-	-	CO	ko:K16013	ko02010,map02010	ko00000,ko00001,ko02000	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
JMALFHDP_01561	6.09e-231	cydB	1.10.3.14	-	C	ko:K00426	ko00190,ko01100,ko02020,map00190,map01100,map02020	ko00000,ko00001,ko00002,ko01000	Cytochrome d ubiquinol oxidase subunit II
JMALFHDP_01562	0.0	cydA	1.10.3.14	-	C	ko:K00425	ko00190,ko01100,ko02020,map00190,map01100,map02020	ko00000,ko00001,ko00002,ko01000	ubiquinol oxidase
JMALFHDP_01563	0.0	-	-	-	V	ko:K02003,ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
JMALFHDP_01564	8.56e-250	-	-	-	S	-	-	-	DUF218 domain
JMALFHDP_01565	2.26e-134	-	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
JMALFHDP_01566	9.16e-123	-	-	-	S	ko:K08996	-	ko00000	Protein of unknown function (DUF1440)
JMALFHDP_01567	0.0	-	-	-	G	ko:K02775	ko00052,ko01100,ko02060,map00052,map01100,map02060	ko00000,ko00001,ko00002,ko02000	PTS system Galactitol-specific IIC component
JMALFHDP_01568	8.53e-282	-	-	-	G	ko:K02775	ko00052,ko01100,ko02060,map00052,map01100,map02060	ko00000,ko00001,ko00002,ko02000	PTS system sugar-specific permease component
JMALFHDP_01570	1.11e-195	-	-	-	S	-	-	-	Protein of unknown function (DUF979)
JMALFHDP_01571	2.42e-154	pcp	3.4.19.3	-	O	ko:K01304	-	ko00000,ko01000,ko01002	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
JMALFHDP_01572	2.37e-42	-	-	-	-	-	-	-	-
JMALFHDP_01573	2.36e-43	-	-	-	-	-	-	-	-
JMALFHDP_01574	4.89e-38	-	-	-	-	-	-	-	-
JMALFHDP_01575	5.98e-33	mutR	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
JMALFHDP_01576	4.81e-154	mutR	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
JMALFHDP_01577	0.0	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC transporter transmembrane region
JMALFHDP_01579	2.29e-256	napA	-	-	P	-	-	-	Sodium/hydrogen exchanger family
JMALFHDP_01580	0.0	cadA	-	-	P	-	-	-	P-type ATPase
JMALFHDP_01581	2.47e-112	ykuL	-	-	S	-	-	-	(CBS) domain
JMALFHDP_01582	5.54e-48	-	-	-	-	-	-	-	-
JMALFHDP_01584	4.24e-73	-	-	-	-	-	-	-	-
JMALFHDP_01586	2.31e-259	-	-	-	S	-	-	-	Membrane
JMALFHDP_01587	2.79e-59	-	-	-	-	-	-	-	-
JMALFHDP_01588	9.7e-07	dltX	-	-	S	-	-	-	D-Ala-teichoic acid biosynthesis protein
JMALFHDP_01589	0.0	dltA	6.1.1.13	-	H	ko:K03367	ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01000,ko01504	Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
JMALFHDP_01590	4.02e-304	dltB	-	-	M	ko:K03739	ko01503,ko02020,ko05150,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01504	MBOAT, membrane-bound O-acyltransferase family
JMALFHDP_01591	2.11e-49	dltC	6.1.1.13	-	J	ko:K14188	ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01000,ko01504	Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
JMALFHDP_01592	0.0	dltD	-	-	M	ko:K03740	ko01503,ko02020,ko05150,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01504	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
JMALFHDP_01593	2.03e-222	pbpX2	-	-	V	-	-	-	Beta-lactamase
JMALFHDP_01594	1.02e-272	-	-	-	E	-	-	-	Major Facilitator Superfamily
JMALFHDP_01595	4.25e-53	-	-	-	-	-	-	-	-
JMALFHDP_01596	1.8e-305	pts13C	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
JMALFHDP_01597	2.05e-198	-	-	-	S	-	-	-	Alpha/beta hydrolase of unknown function (DUF915)
JMALFHDP_01598	0.0	clpE	-	-	O	ko:K03697,ko:K04086	-	ko00000,ko03110	AAA domain (Cdc48 subfamily)
JMALFHDP_01599	0.0	-	-	-	E	ko:K03294	-	ko00000	Amino Acid
JMALFHDP_01601	1.51e-236	manL	2.7.1.191	-	G	ko:K02793,ko:K02794	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system sorbose subfamily IIB component
JMALFHDP_01602	1.23e-166	manY	-	-	G	ko:K02746,ko:K02795	ko00051,ko00052,ko00520,ko01100,ko02060,map00051,map00052,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	PTS system
JMALFHDP_01603	2.46e-219	manN	-	-	G	ko:K02796	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	system, mannose fructose sorbose family IID component
JMALFHDP_01604	1.22e-85	-	-	-	S	-	-	-	Domain of unknown function (DUF956)
JMALFHDP_01605	8.98e-317	yifK	-	-	E	ko:K03293	-	ko00000	Amino acid permease
JMALFHDP_01606	2.77e-306	yifK	-	-	E	ko:K03293	-	ko00000	Amino acid permease
JMALFHDP_01607	1.19e-176	puuD	-	-	S	ko:K07010	-	ko00000,ko01002	peptidase C26
JMALFHDP_01608	1.71e-303	-	-	-	E	-	-	-	amino acid
JMALFHDP_01609	8.5e-285	-	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
JMALFHDP_01610	5.78e-238	asnA	6.3.1.1	-	F	ko:K01914	ko00250,ko00460,ko01100,ko01110,ko01230,map00250,map00460,map01100,map01110,map01230	ko00000,ko00001,ko01000	aspartate--ammonia ligase
JMALFHDP_01611	3.07e-207	-	-	-	EG	-	-	-	EamA-like transporter family
JMALFHDP_01612	0.0	yhdG	-	-	E	ko:K03294	-	ko00000	Amino Acid
JMALFHDP_01613	8.43e-170	cobQ	-	-	S	ko:K07009	-	ko00000	glutamine amidotransferase
JMALFHDP_01614	1.13e-191	thiD	2.7.1.49, 2.7.4.7	-	H	ko:K00941	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Phosphomethylpyrimidine kinase
JMALFHDP_01615	2.82e-188	-	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Tyrosine phosphatase family
JMALFHDP_01616	1.19e-236	scrR	-	-	K	ko:K02529,ko:K03484	-	ko00000,ko03000	Transcriptional regulator, LacI family
JMALFHDP_01617	0.0	scrB	3.2.1.26	GH32	G	ko:K01193	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	invertase
JMALFHDP_01618	0.0	scrA	2.7.1.211	-	G	ko:K02808,ko:K02809,ko:K02810	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
JMALFHDP_01619	3.09e-118	ymdB	-	-	S	-	-	-	Macro domain protein
JMALFHDP_01620	0.0	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC transporter transmembrane region
JMALFHDP_01621	5.43e-157	puuD	-	-	S	ko:K07010	-	ko00000,ko01002	peptidase C26
JMALFHDP_01622	1.31e-287	mdtG2	-	-	EGP	ko:K08161	-	ko00000,ko02000	Transporter, major facilitator family protein
JMALFHDP_01623	2.49e-201	-	-	-	-	-	-	-	-
JMALFHDP_01624	4.04e-71	aroD	1.1.1.25, 4.2.1.10	-	E	ko:K03785,ko:K13832	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	3-dehydroquinate dehydratase activity
JMALFHDP_01625	1.48e-219	-	-	-	C	-	-	-	Domain of unknown function (DUF4931)
JMALFHDP_01626	9.8e-197	-	-	-	K	-	-	-	Helix-turn-helix domain, rpiR family
JMALFHDP_01627	2.92e-183	-	3.5.2.6	-	V	ko:K17836	ko00311,ko01130,ko01501,map00311,map01130,map01501	ko00000,ko00001,ko00002,ko01000,ko01504	Beta-lactamase enzyme family
JMALFHDP_01628	0.0	glpQ	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	Membrane domain of glycerophosphoryl diester phosphodiesterase
JMALFHDP_01629	2.07e-206	-	-	-	O	-	-	-	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
JMALFHDP_01630	4.68e-168	-	-	-	-	-	-	-	-
JMALFHDP_01631	6.83e-69	-	-	-	-	-	-	-	-
JMALFHDP_01632	2.37e-178	XK27_08125	-	-	S	ko:K09861	-	ko00000	Belongs to the UPF0246 family
JMALFHDP_01633	7.53e-137	-	-	-	S	-	-	-	Protein of unknown function (DUF975)
JMALFHDP_01634	5.97e-179	-	-	-	S	ko:K06889	-	ko00000	Alpha/beta hydrolase family
JMALFHDP_01635	1.7e-146	-	-	-	G	-	-	-	Phosphoglycerate mutase family
JMALFHDP_01636	9.98e-146	-	-	-	G	-	-	-	phosphoglycerate mutase
JMALFHDP_01637	2.72e-119	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
JMALFHDP_01638	5.87e-234	yxeA	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter permease
JMALFHDP_01639	1.95e-149	lolD	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
JMALFHDP_01640	5.09e-203	-	-	-	K	ko:K03488	-	ko00000,ko03000	CAT RNA binding domain
JMALFHDP_01641	0.0	-	-	-	G	ko:K02755,ko:K02756,ko:K02757	ko02060,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
JMALFHDP_01642	0.0	-	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
JMALFHDP_01643	7.59e-257	pepD4	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
JMALFHDP_01644	1.64e-51	pepD4	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
JMALFHDP_01645	6.73e-51	-	-	-	-	-	-	-	-
JMALFHDP_01646	6.92e-141	-	-	-	K	-	-	-	WHG domain
JMALFHDP_01647	1.56e-126	azo1	1.5.1.36, 1.7.1.6	-	S	ko:K03206,ko:K19784,ko:K22393	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	NADPH-dependent FMN reductase
JMALFHDP_01648	1.81e-127	azr	1.5.1.36	-	S	ko:K22394	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	NADPH-dependent FMN reductase
JMALFHDP_01649	7.68e-253	-	4.2.1.126	-	S	ko:K07106,ko:K09963	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Bacterial protein of unknown function (DUF871)
JMALFHDP_01650	3.56e-191	-	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Tyrosine phosphatase family
JMALFHDP_01651	1.89e-227	apbE	2.7.1.180	-	H	ko:K03734	-	ko00000,ko01000	Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
JMALFHDP_01652	3.03e-123	cvpA	-	-	S	-	-	-	Colicin V production protein
JMALFHDP_01653	8.33e-167	rsmG	2.1.1.170	-	J	ko:K03501	-	ko00000,ko01000,ko03009,ko03036	Specifically methylates the N7 position of a guanine in 16S rRNA
JMALFHDP_01654	1.28e-197	noc	-	-	K	ko:K03497	-	ko00000,ko03000,ko03036,ko04812	Belongs to the ParB family
JMALFHDP_01655	7.1e-177	soj	-	-	D	ko:K03496	-	ko00000,ko03036,ko04812	Sporulation initiation inhibitor
JMALFHDP_01656	9.01e-198	spo0J	-	-	K	ko:K03497	-	ko00000,ko03000,ko03036,ko04812	Belongs to the ParB family
JMALFHDP_01657	2.58e-58	yyzM	-	-	S	-	-	-	Bacterial protein of unknown function (DUF951)
JMALFHDP_01658	5.42e-254	ychF	-	-	J	ko:K06942	-	ko00000,ko03009	ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
JMALFHDP_01659	6.34e-190	-	-	-	S	-	-	-	Protein of unknown function (DUF1129)
JMALFHDP_01660	0.0	-	-	-	V	ko:K06147,ko:K06148	-	ko00000,ko02000	ABC transporter, ATP-binding protein
JMALFHDP_01661	0.0	ndvA	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter
JMALFHDP_01662	2.39e-156	vanR	-	-	K	-	-	-	response regulator
JMALFHDP_01663	1.85e-264	-	-	-	T	-	-	-	His Kinase A (phosphoacceptor) domain
JMALFHDP_01664	0.0	murE	6.3.2.13, 6.3.2.7	-	M	ko:K01928,ko:K05362	ko00300,ko00550,ko01100,map00300,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
JMALFHDP_01665	3.05e-183	racD	5.1.1.13	-	M	ko:K01779	ko00250,ko01054,map00250,map01054	ko00000,ko00001,ko01000	Belongs to the aspartate glutamate racemases family
JMALFHDP_01666	4.39e-212	natA	-	-	S	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
JMALFHDP_01667	2.06e-280	natB	-	-	CP	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 family transporter protein
JMALFHDP_01668	0.0	agl	3.2.1.20	GH31	G	ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 31 family
JMALFHDP_01669	4.63e-175	fruR	-	-	K	ko:K03436	-	ko00000,ko03000	DeoR C terminal sensor domain
JMALFHDP_01670	1.47e-213	pfkB	2.7.1.56	-	H	ko:K00882	ko00051,map00051	ko00000,ko00001,ko01000	Belongs to the carbohydrate kinase PfkB family. LacC subfamily
JMALFHDP_01671	0.0	fruA	2.7.1.202	-	GT	ko:K02768,ko:K02769,ko:K02770	ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphotransferase System
JMALFHDP_01672	0.0	-	-	-	M	-	-	-	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
JMALFHDP_01673	3.25e-101	-	-	-	M	-	-	-	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
JMALFHDP_01674	2.02e-179	-	3.1.3.102, 3.1.3.104, 3.1.3.23	-	G	ko:K07757,ko:K20861	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Sucrose-6F-phosphate phosphohydrolase
JMALFHDP_01675	4.8e-57	-	-	-	K	ko:K21903	-	ko00000,ko03000	helix_turn_helix, Arsenical Resistance Operon Repressor
JMALFHDP_01676	7.4e-209	-	-	-	P	ko:K02077	-	ko00000,ko00002,ko02000	Belongs to the bacterial solute-binding protein 9 family
JMALFHDP_01677	2.22e-152	adcC	-	-	P	ko:K02074,ko:K09817,ko:K11710	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter
JMALFHDP_01678	8.87e-174	znuB	-	-	U	ko:K02075,ko:K09816	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC 3 transport family
JMALFHDP_01679	0.0	lctP	-	-	C	ko:K03303	-	ko00000,ko02000	L-lactate permease
JMALFHDP_01680	2.73e-86	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
JMALFHDP_01681	1.39e-10	tnpA1	-	-	L	-	-	-	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
JMALFHDP_01682	2.46e-93	tnpA1	-	-	L	-	-	-	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
JMALFHDP_01683	9.77e-29	tnpA1	-	-	L	-	-	-	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
JMALFHDP_01684	6.71e-53	tnpA1	-	-	L	-	-	-	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
JMALFHDP_01686	2.01e-268	-	-	-	L	-	-	-	COG3547 Transposase and inactivated derivatives
JMALFHDP_01687	3.99e-58	-	-	-	M	-	-	-	Rib/alpha-like repeat
JMALFHDP_01688	0.0	pepF	-	-	E	ko:K08602	-	ko00000,ko01000,ko01002	oligoendopeptidase F
JMALFHDP_01689	6.04e-271	brpA	-	-	K	-	-	-	Cell envelope-like function transcriptional attenuator common domain protein
JMALFHDP_01690	6.6e-53	-	-	-	-	-	-	-	-
JMALFHDP_01691	7.55e-82	-	-	-	-	-	-	-	-
JMALFHDP_01692	0.0	-	-	-	S	-	-	-	ABC transporter, ATP-binding protein
JMALFHDP_01693	9.33e-179	-	-	-	S	-	-	-	Putative threonine/serine exporter
JMALFHDP_01694	1.61e-100	-	-	-	S	-	-	-	Threonine/Serine exporter, ThrE
JMALFHDP_01695	4.28e-53	-	-	-	-	-	-	-	-
JMALFHDP_01696	3.75e-79	-	-	-	T	ko:K07171	-	ko00000,ko01000,ko02048	PemK-like, MazF-like toxin of type II toxin-antitoxin system
JMALFHDP_01697	2.64e-103	-	-	-	-	-	-	-	-
JMALFHDP_01698	5.84e-231	nrdF	1.17.4.1	-	F	ko:K00526	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
JMALFHDP_01699	4.52e-106	nrdI	-	-	F	ko:K03647	-	ko00000	NrdI Flavodoxin like
JMALFHDP_01700	9.09e-142	-	-	-	-	-	-	-	-
JMALFHDP_01701	0.0	-	-	-	S	-	-	-	O-antigen ligase like membrane protein
JMALFHDP_01702	3.52e-58	-	-	-	-	-	-	-	-
JMALFHDP_01703	2.9e-127	gmk2	2.7.4.8	-	F	ko:K00942	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko00002,ko01000	Guanylate kinase
JMALFHDP_01705	2.3e-165	-	-	-	M	ko:K21471	-	ko00000,ko01000,ko01002,ko01011	NlpC P60 family protein
JMALFHDP_01706	9.56e-295	-	-	-	S	-	-	-	Putative peptidoglycan binding domain
JMALFHDP_01707	3.04e-298	hflX	-	-	S	ko:K03665	-	ko00000,ko03009	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
JMALFHDP_01708	0.0	-	-	-	E	-	-	-	Amino Acid
JMALFHDP_01709	3.81e-172	cysA	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
JMALFHDP_01710	0.0	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	FtsX-like permease family
JMALFHDP_01711	2.95e-160	gpm2	-	-	G	-	-	-	Phosphoglycerate mutase family
JMALFHDP_01712	2.45e-34	-	-	-	-	-	-	-	-
JMALFHDP_01713	4.73e-69	-	-	-	-	-	-	-	-
JMALFHDP_01714	4.21e-189	exoA	3.1.11.2	-	L	ko:K01142	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	exodeoxyribonuclease III
JMALFHDP_01715	0.0	ptsG	2.7.1.199, 2.7.1.208	-	G	ko:K02777,ko:K02778,ko:K02779,ko:K02790,ko:K02791	ko00010,ko00500,ko00520,ko02026,ko02060,ko05111,map00010,map00500,map00520,map02026,map02060,map05111	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system, EIIB
JMALFHDP_01716	7.74e-163	nanE	5.1.3.9	-	G	ko:K01788	ko00520,map00520	ko00000,ko00001,ko01000	Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
JMALFHDP_01717	2.67e-184	-	-	-	K	-	-	-	Helix-turn-helix domain, rpiR family
JMALFHDP_01718	1.73e-60	dacA	3.4.16.4	-	M	ko:K07258	ko00550,ko01100,map00550,map01100	ko00000,ko00001,ko01000,ko01002,ko01011	Belongs to the peptidase S11 family
JMALFHDP_01719	3.48e-212	-	-	-	M	-	-	-	ErfK YbiS YcfS YnhG
JMALFHDP_01720	5.49e-70	-	-	-	M	-	-	-	ErfK YbiS YcfS YnhG
JMALFHDP_01721	0.0	-	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	ATPase, P-type (transporting), HAD superfamily, subfamily IC
JMALFHDP_01723	4e-148	XK27_08875	-	-	O	-	-	-	PFAM peptidase M10A and M12B, matrixin and adamalysin
JMALFHDP_01724	0.0	helD	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	DNA helicase
JMALFHDP_01725	1.69e-171	-	-	-	S	-	-	-	Peptidase_C39 like family
JMALFHDP_01726	5.03e-138	-	-	-	K	ko:K02529	-	ko00000,ko03000	helix_turn _helix lactose operon repressor
JMALFHDP_01727	1.13e-124	-	5.1.3.1	-	G	ko:K01783	ko00030,ko00040,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Ribulose-phosphate 3 epimerase family
JMALFHDP_01728	1.49e-92	-	5.3.1.26, 5.3.1.6	-	G	ko:K01808,ko:K01819	ko00030,ko00051,ko00052,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00051,map00052,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Ribose/Galactose Isomerase
JMALFHDP_01729	6.54e-181	-	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
JMALFHDP_01730	3.88e-113	-	-	-	O	-	-	-	peptidase U32
JMALFHDP_01731	1.2e-208	-	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	beta-glucosidase activity
JMALFHDP_01732	1.97e-159	-	-	-	K	-	-	-	Helix-turn-helix domain, rpiR family
JMALFHDP_01733	4.36e-105	-	-	-	L	-	-	-	MgsA AAA+ ATPase C terminal
JMALFHDP_01734	5.21e-310	lacE	2.7.1.207	-	G	ko:K02761,ko:K02787,ko:K02788	ko00052,ko00500,ko01100,ko02060,map00052,map00500,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
JMALFHDP_01735	1.13e-133	-	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase
JMALFHDP_01736	7.9e-212	coaA	2.7.1.33	-	F	ko:K00867	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Pantothenic acid kinase
JMALFHDP_01737	7.62e-132	efp	-	-	J	ko:K02356	-	ko00000,ko03012	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
JMALFHDP_01738	1.35e-13	-	-	-	M	-	-	-	Rib/alpha-like repeat
JMALFHDP_01739	0.0	-	-	-	M	-	-	-	Rib/alpha-like repeat
JMALFHDP_01740	2.19e-179	bglG5	-	-	K	ko:K03488	-	ko00000,ko03000	CAT RNA binding domain
JMALFHDP_01741	0.0	pts33BCA	-	-	G	ko:K02755,ko:K02756,ko:K02757	ko02060,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
JMALFHDP_01742	0.0	-	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
JMALFHDP_01743	7.99e-59	-	-	-	-	-	-	-	-
JMALFHDP_01744	2.04e-202	-	-	-	EG	-	-	-	EamA-like transporter family
JMALFHDP_01745	4.46e-72	-	-	-	S	-	-	-	PFAM Archaeal ATPase
JMALFHDP_01746	0.0	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
JMALFHDP_01747	0.0	uvrA2	-	-	L	ko:K03701	ko03420,map03420	ko00000,ko00001,ko03400	excinuclease ABC, A subunit
JMALFHDP_01748	1.73e-89	-	-	-	-	-	-	-	-
JMALFHDP_01749	4.41e-116	luxS	4.4.1.21	-	H	ko:K07173	ko00270,ko01100,ko01230,ko02024,ko02026,ko05111,map00270,map01100,map01230,map02024,map02026,map05111	ko00000,ko00001,ko00002,ko01000	Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
JMALFHDP_01750	7.93e-272	metE	2.1.1.14	-	E	ko:K00549	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	methionine synthase, vitamin-B12 independent
JMALFHDP_01751	5.82e-302	tcyP	-	-	U	ko:K06956	-	ko00000	Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
JMALFHDP_01752	2.68e-168	-	-	-	S	-	-	-	PAS domain
JMALFHDP_01753	6.63e-194	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
JMALFHDP_01754	1.11e-70	mscL	-	-	M	ko:K03282	-	ko00000,ko02000	Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
JMALFHDP_01755	0.0	-	-	-	M	-	-	-	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
JMALFHDP_01756	1.7e-188	pnuC	-	-	H	ko:K03811	-	ko00000,ko02000	nicotinamide mononucleotide transporter
JMALFHDP_01757	2.87e-117	-	-	-	S	-	-	-	PAS domain
JMALFHDP_01758	6.83e-312	yqjE	3.4.11.14, 3.4.11.4	-	E	ko:K01258,ko:K01263	-	ko00000,ko01000,ko01002	Cleaves the N-terminal amino acid of tripeptides
JMALFHDP_01759	2.25e-95	-	-	-	S	-	-	-	Protein of unknown function (DUF3290)
JMALFHDP_01760	7.18e-145	yviA	-	-	S	-	-	-	Protein of unknown function (DUF421)
JMALFHDP_01761	1.32e-180	-	-	-	K	-	-	-	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
JMALFHDP_01762	6.65e-234	-	2.7.7.7	-	L	ko:K02342	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	EXOIII
JMALFHDP_01763	3.02e-255	ltrA	-	-	S	-	-	-	Bacterial low temperature requirement A protein (LtrA)
JMALFHDP_01764	8.33e-189	dkgB	-	-	S	-	-	-	reductase
JMALFHDP_01765	1.46e-202	endA	-	-	F	ko:K15051	-	ko00000	DNA RNA non-specific endonuclease
JMALFHDP_01766	0.0	pepD1	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
JMALFHDP_01767	5.68e-258	malK	-	-	P	ko:K10112,ko:K17240	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ATPases associated with a variety of cellular activities
JMALFHDP_01768	4.34e-202	-	-	-	P	ko:K02025	-	ko00000,ko00002,ko02000	ABC-type sugar transport systems, permease components
JMALFHDP_01769	3.39e-189	-	-	-	P	ko:K02026	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
JMALFHDP_01770	0.0	-	-	-	S	-	-	-	Zn-dependent metallo-hydrolase RNA specificity domain
JMALFHDP_01771	1.38e-311	-	-	-	G	ko:K02027	-	ko00000,ko00002,ko02000	Bacterial extracellular solute-binding protein
JMALFHDP_01772	1.3e-72	-	-	-	S	ko:K08987	-	ko00000	Protein of unknown function (DUF1304)
JMALFHDP_01773	7.2e-98	yybA	-	-	K	-	-	-	Transcriptional regulator
JMALFHDP_01774	8.96e-123	XK27_03150	2.3.1.57	-	K	ko:K22441	-	ko00000,ko01000	Acetyltransferase (GNAT) domain
JMALFHDP_01775	2.1e-103	yjcF	-	-	S	-	-	-	Acetyltransferase (GNAT) domain
JMALFHDP_01776	2.64e-213	-	-	-	G	-	-	-	BadF/BadG/BcrA/BcrD ATPase family
JMALFHDP_01777	8.76e-211	-	3.5.2.6	-	V	ko:K17836	ko00311,ko01130,ko01501,map00311,map01130,map01501	ko00000,ko00001,ko00002,ko01000,ko01504	Beta-lactamase enzyme family
JMALFHDP_01778	2.08e-126	yobS	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
JMALFHDP_01779	0.0	ydgH	-	-	S	ko:K06994	-	ko00000	MMPL family
JMALFHDP_01780	1.78e-168	-	-	-	S	-	-	-	haloacid dehalogenase-like hydrolase
JMALFHDP_01781	3.24e-159	-	-	-	S	-	-	-	SNARE associated Golgi protein
JMALFHDP_01782	1.05e-229	-	-	-	-	-	-	-	-
JMALFHDP_01783	0.0	gabD	1.2.1.16, 1.2.1.20, 1.2.1.79	-	C	ko:K00135	ko00250,ko00310,ko00350,ko00650,ko00760,ko01100,ko01120,map00250,map00310,map00350,map00650,map00760,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Belongs to the aldehyde dehydrogenase family
JMALFHDP_01784	4.94e-184	plcR	-	-	K	ko:K20480	ko02024,map02024	ko00000,ko00001,ko03000	Helix-turn-helix
JMALFHDP_01785	1.52e-194	-	-	-	I	-	-	-	alpha/beta hydrolase fold
JMALFHDP_01786	1.21e-137	-	-	-	S	-	-	-	SNARE associated Golgi protein
JMALFHDP_01787	1.9e-131	yjcK	2.3.1.128	-	J	ko:K03790	-	ko00000,ko01000,ko03009	Acetyltransferase (GNAT) domain
JMALFHDP_01788	4.36e-300	serS	6.1.1.11	-	J	ko:K01875	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
JMALFHDP_01805	1.09e-79	-	-	-	-	-	-	-	-
JMALFHDP_01817	4.46e-279	-	2.4.1.337	GT4	M	ko:K19002	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000,ko01003	Glycosyl transferase 4-like domain
JMALFHDP_01818	2.04e-253	cpoA	2.4.1.208	GT4	M	ko:K13677,ko:K13678	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000,ko01003	Glycosyltransferase, group 1 family protein
JMALFHDP_01819	1.28e-231	mprF	-	-	S	ko:K07027	-	ko00000,ko02000	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
JMALFHDP_01820	0.0	ltaS	2.7.8.20	-	M	ko:K19005	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
JMALFHDP_01839	7.45e-298	cycA	-	-	E	ko:K03293,ko:K11737	-	ko00000,ko02000	Amino acid permease
JMALFHDP_01840	0.0	adhE	1.1.1.1, 1.2.1.10	-	C	ko:K04072	ko00010,ko00071,ko00350,ko00620,ko00625,ko00626,ko00650,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00620,map00625,map00626,map00650,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	belongs to the iron- containing alcohol dehydrogenase family
JMALFHDP_01841	1.48e-240	-	-	-	M	-	-	-	Cna protein B-type domain
JMALFHDP_01842	7.59e-92	-	-	-	M	-	-	-	Cna protein B-type domain
JMALFHDP_01843	1.38e-155	-	-	-	-	-	-	-	-
JMALFHDP_01846	0.000183	-	-	-	S	-	-	-	Domain of unknown function (DUF4176)
JMALFHDP_01847	7.65e-83	traA	-	-	L	-	-	-	MobA/MobL family
JMALFHDP_01848	6.74e-80	-	-	-	S	-	-	-	Phage derived protein Gp49-like (DUF891)
JMALFHDP_01849	1.1e-56	-	-	-	K	-	-	-	Helix-turn-helix domain
JMALFHDP_01850	1.08e-37	-	-	-	S	-	-	-	Bacterial epsilon antitoxin
JMALFHDP_01852	0.0	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter permease
JMALFHDP_01853	1.38e-156	-	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
JMALFHDP_01854	2.07e-117	-	-	-	F	-	-	-	AAA domain
JMALFHDP_01856	1.5e-24	slyA	-	-	K	-	-	-	DNA-binding transcription factor activity
JMALFHDP_01857	4.21e-129	pinR1	-	-	L	-	-	-	Helix-turn-helix domain of Hin and related proteins, a family of DNA-binding domains unique to bacteria and represented by the Hin protein of Salmonella. The basic HTH domain is a simple fold comprised of three core helices that form a right-handed
JMALFHDP_01858	5.17e-250	nrdF	1.17.4.1	-	F	ko:K00526	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
JMALFHDP_01859	5.23e-97	nrdI	-	-	F	ko:K03647	-	ko00000	NrdI Flavodoxin like
JMALFHDP_01860	0.0	nrdE	1.17.4.1	-	F	ko:K00525	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
JMALFHDP_01861	9.73e-273	-	-	-	L	ko:K07497	-	ko00000	COG2963 Transposase and inactivated derivatives
JMALFHDP_01862	1.23e-34	-	-	-	L	ko:K07497	-	ko00000	COG2963 Transposase and inactivated derivatives
JMALFHDP_01863	4.39e-18	-	-	-	-	-	-	-	-
JMALFHDP_01865	2.04e-117	soj	-	-	D	-	-	-	CobQ CobB MinD ParA nucleotide binding domain protein
JMALFHDP_01866	8.1e-44	-	-	-	D	-	-	-	Antitoxin component of a toxin-antitoxin (TA) module
JMALFHDP_01867	1.1e-46	-	-	-	-	-	-	-	-
JMALFHDP_01871	1.12e-241	-	2.7.7.73, 2.7.7.80	-	H	ko:K03148,ko:K21029	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000	Involved in molybdopterin and thiamine biosynthesis, family 2
JMALFHDP_01873	0.0	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
JMALFHDP_01874	5.94e-213	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
JMALFHDP_01875	2.01e-268	-	-	-	L	-	-	-	COG3547 Transposase and inactivated derivatives
JMALFHDP_01876	2.14e-117	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
JMALFHDP_01877	9.93e-73	-	-	-	I	-	-	-	alpha/beta hydrolase fold
JMALFHDP_01878	1.32e-19	-	-	-	-	-	-	-	-
JMALFHDP_01879	2.51e-109	tnpA1	-	-	L	-	-	-	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
JMALFHDP_01880	5.78e-39	-	-	-	-	-	-	-	-
JMALFHDP_01881	4.65e-184	-	-	-	D	-	-	-	AAA domain
JMALFHDP_01882	3.26e-215	repA	-	-	S	-	-	-	Replication initiator protein A
JMALFHDP_01883	8.11e-58	-	-	-	L	ko:K07473	-	ko00000,ko02048	Addiction module antitoxin, RelB DinJ family
JMALFHDP_01884	1.3e-110	-	-	-	-	-	-	-	-
JMALFHDP_01885	3.34e-52	-	-	-	-	-	-	-	-
JMALFHDP_01886	4.03e-37	-	-	-	-	-	-	-	-
JMALFHDP_01887	0.0	traA	-	-	L	-	-	-	MobA MobL family protein
JMALFHDP_01889	3.5e-56	mscL	-	-	M	ko:K03282	-	ko00000,ko02000	Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
JMALFHDP_01890	3.3e-200	-	-	-	S	ko:K07133	-	ko00000	cog cog1373
JMALFHDP_01891	2.7e-104	tnpR1	-	-	L	-	-	-	Resolvase, N terminal domain
JMALFHDP_01892	6.19e-315	merA	1.16.1.1	-	C	ko:K00520,ko:K21739	-	ko00000,ko01000	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
JMALFHDP_01893	3.7e-186	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
JMALFHDP_01894	7.08e-108	pnuC	-	-	H	ko:K03811	-	ko00000,ko02000	Nicotinamide mononucleotide transporter
JMALFHDP_01895	1.22e-246	qor	1.1.1.1, 1.6.5.5	-	C	ko:K00001,ko:K00344	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily
JMALFHDP_01896	1.46e-31	-	-	-	-	-	-	-	-
JMALFHDP_01897	2.96e-118	-	-	-	L	-	-	-	Psort location Cytoplasmic, score
JMALFHDP_01898	0.0	traA	-	-	L	-	-	-	MobA MobL family protein
JMALFHDP_01899	6.89e-37	-	-	-	-	-	-	-	-
JMALFHDP_01900	2.09e-55	-	-	-	-	-	-	-	-
JMALFHDP_01901	3.07e-140	-	-	-	S	-	-	-	protein conserved in bacteria
JMALFHDP_01902	1.99e-35	-	-	-	-	-	-	-	-
JMALFHDP_01903	9.14e-55	-	-	-	L	ko:K07473	-	ko00000,ko02048	Addiction module antitoxin, RelB DinJ family
JMALFHDP_01904	4.52e-226	repA	-	-	S	-	-	-	Replication initiator protein A
JMALFHDP_01906	1.47e-171	-	-	-	D	ko:K03496	-	ko00000,ko03036,ko04812	CobQ CobB MinD ParA nucleotide binding domain protein
JMALFHDP_01907	5.54e-39	-	-	-	L	ko:K07473	-	ko00000,ko02048	RelB antitoxin
JMALFHDP_01908	1.68e-52	-	-	-	S	ko:K19157	-	ko00000,ko01000,ko02048	Bacterial toxin of type II toxin-antitoxin system, YafQ
JMALFHDP_01909	8.61e-75	-	-	-	S	-	-	-	Bacterial toxin of type II toxin-antitoxin system, YafQ
JMALFHDP_01910	3.45e-64	-	-	-	D	ko:K19159	-	ko00000,ko02048	Antitoxin component of a toxin-antitoxin (TA) module
JMALFHDP_01911	0.000311	-	-	-	L	ko:K07482	-	ko00000	Helix-turn-helix domain
JMALFHDP_01912	7.43e-124	-	-	-	K	-	-	-	Transcriptional regulator
JMALFHDP_01913	1.16e-265	arsR	-	-	K	-	-	-	DNA-binding transcription factor activity
JMALFHDP_01914	1.73e-93	-	-	-	H	-	-	-	ThiF family
JMALFHDP_01915	1.84e-299	-	-	-	EGP	-	-	-	Major Facilitator
JMALFHDP_01916	5.62e-132	-	3.2.2.20	-	L	ko:K01246	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Methyladenine glycosylase
JMALFHDP_01917	1.32e-68	-	-	-	EGP	-	-	-	Major Facilitator
JMALFHDP_01920	6.74e-33	-	-	-	S	ko:K07473	-	ko00000,ko02048	RelB antitoxin
JMALFHDP_01921	7.33e-141	-	-	-	-	-	-	-	-
JMALFHDP_01922	1.65e-102	-	-	-	-	-	-	-	-
JMALFHDP_01923	7.28e-132	pinR1	-	-	L	-	-	-	Helix-turn-helix domain of Hin and related proteins, a family of DNA-binding domains unique to bacteria and represented by the Hin protein of Salmonella. The basic HTH domain is a simple fold comprised of three core helices that form a right-handed
JMALFHDP_01924	5.35e-280	-	-	-	-	-	-	-	-
JMALFHDP_01925	2.4e-191	-	-	-	P	ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter
JMALFHDP_01926	8.44e-201	-	-	-	P	ko:K16786	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter
JMALFHDP_01927	1.25e-169	-	-	-	P	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Cobalt transport protein
JMALFHDP_01928	6.84e-124	-	-	-	T	ko:K16923	-	ko00000,ko00002,ko02000	phosphorelay sensor kinase activity
JMALFHDP_01929	4.47e-98	pinR1	-	-	L	-	-	-	Helix-turn-helix domain of Hin and related proteins, a family of DNA-binding domains unique to bacteria and represented by the Hin protein of Salmonella. The basic HTH domain is a simple fold comprised of three core helices that form a right-handed
JMALFHDP_01930	3.21e-26	-	-	-	-	-	-	-	-
JMALFHDP_01931	1.82e-135	pncA	-	-	Q	-	-	-	Isochorismatase family
JMALFHDP_01932	0.0	nadC2	6.3.4.21	-	F	ko:K00763	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
JMALFHDP_01933	2.06e-169	-	-	-	F	-	-	-	NUDIX domain