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ORF_ID	e_value	Gene_name	EC_number	CAZy	COGs	KEGG_ko	KEGG_Pathway	BRITE	Description
APKMJDPJ_00001	3.62e-67	-	-	-	M	-	-	-	Putative OmpA-OmpF-like porin family
APKMJDPJ_00002	3.98e-92	hslR	-	-	J	ko:K04762	-	ko00000,ko03110	COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)
APKMJDPJ_00003	4.62e-136	pth	3.1.1.29	-	J	ko:K01056	-	ko00000,ko01000,ko03012	The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
APKMJDPJ_00004	1.71e-131	ctc	-	-	J	ko:K02897	ko03010,map03010	ko00000,ko00001,ko00002,ko03011	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
APKMJDPJ_00005	1.69e-80	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_00006	3.71e-218	nusB	-	-	K	ko:K03625	-	ko00000,ko03009,ko03021	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
APKMJDPJ_00007	3.56e-68	yajC	-	-	U	ko:K03210	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Preprotein translocase subunit
APKMJDPJ_00008	4.91e-240	-	-	-	S	-	-	-	COG NOG14472 non supervised orthologous group
APKMJDPJ_00009	6.18e-143	coaE	2.7.1.24	-	H	ko:K00859	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
APKMJDPJ_00010	1.51e-90	-	-	-	S	-	-	-	COG NOG14473 non supervised orthologous group
APKMJDPJ_00011	7.18e-43	-	-	-	-	-	-	-	-
APKMJDPJ_00012	0.0	clpB	-	-	O	ko:K03695	ko04213,map04213	ko00000,ko00001,ko03110	Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
APKMJDPJ_00013	2.26e-130	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_00014	1.71e-209	cysL	-	-	K	-	-	-	LysR substrate binding domain protein
APKMJDPJ_00015	5.86e-222	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_00016	2.47e-153	-	-	-	S	-	-	-	Domain of unknown function (DUF4252)
APKMJDPJ_00017	2.96e-105	-	-	-	-	-	-	-	-
APKMJDPJ_00018	2.24e-117	-	-	-	K	ko:K03088	-	ko00000,ko03021	COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog
APKMJDPJ_00020	1.52e-239	recA	-	-	L	ko:K03553	ko03440,map03440	ko00000,ko00001,ko00002,ko03400	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
APKMJDPJ_00021	5.14e-105	bcp	1.11.1.15	-	O	ko:K03564	-	ko00000,ko01000	bacterioferritin comigratory protein
APKMJDPJ_00022	1.11e-305	LYS1	1.5.1.7	-	E	ko:K00290	ko00300,ko00310,ko01100,ko01110,ko01130,ko01230,map00300,map00310,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	COG1748 Saccharopine dehydrogenase and related
APKMJDPJ_00023	9.93e-305	-	-	-	-	-	-	-	-
APKMJDPJ_00024	1.19e-187	-	-	-	O	-	-	-	META domain
APKMJDPJ_00026	1.43e-226	-	-	-	P	ko:K02015	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
APKMJDPJ_00027	1.34e-279	-	-	-	P	ko:K02016	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG0614 ABC-type Fe3 -hydroxamate transport system, periplasmic component
APKMJDPJ_00029	0.0	kpsD	-	-	M	-	-	-	COG1596 Periplasmic protein involved in polysaccharide export
APKMJDPJ_00030	2.42e-127	nusG	-	-	K	ko:K02601,ko:K05785	-	ko00000,ko03000,ko03009,ko03021	Participates in transcription elongation, termination and antitermination
APKMJDPJ_00031	0.0	dnaK	-	-	O	ko:K04043	ko03018,ko04212,ko05152,map03018,map04212,map05152	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	Heat shock 70 kDa protein
APKMJDPJ_00032	0.0	-	-	-	P	-	-	-	ATP synthase F0, A subunit
APKMJDPJ_00033	8.52e-209	nfo	3.1.21.2	-	L	ko:K01151	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
APKMJDPJ_00034	0.0	trpB	4.2.1.20	-	E	ko:K06001	ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
APKMJDPJ_00035	0.0	ktrB	-	-	P	ko:K03498	-	ko00000,ko02000	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_00036	3.03e-159	ktrA	-	-	C	ko:K03499	-	ko00000,ko02000	Psort location Cytoplasmic, score 8.96
APKMJDPJ_00037	0.0	katA	1.11.1.6	-	P	ko:K03781	ko00380,ko00630,ko01110,ko01130,ko01200,ko04011,ko04016,ko04068,ko04146,ko04211,ko04212,ko04213,ko05014,map00380,map00630,map01110,map01130,map01200,map04011,map04016,map04068,map04146,map04211,map04212,map04213,map05014	ko00000,ko00001,ko00002,ko01000	Belongs to the catalase family
APKMJDPJ_00038	0.0	-	3.2.1.177	GH31	G	ko:K01811	-	ko00000,ko01000	Belongs to the glycosyl hydrolase 31 family
APKMJDPJ_00039	3.81e-123	-	-	-	K	ko:K03088	-	ko00000,ko03021	ECF sigma factor
APKMJDPJ_00040	1.28e-258	-	-	-	G	-	-	-	Belongs to the glycosyl hydrolase 43 family
APKMJDPJ_00041	6.05e-220	per1	3.5.2.6	-	V	ko:K17836	ko00311,ko01130,ko01501,map00311,map01130,map01501	ko00000,ko00001,ko00002,ko01000,ko01504	COG2367 Beta-lactamase class A
APKMJDPJ_00043	9.4e-218	-	-	-	PT	-	-	-	Domain of unknown function (DUF4974)
APKMJDPJ_00045	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
APKMJDPJ_00046	0.0	-	-	-	H	-	-	-	Susd and RagB outer membrane lipoprotein
APKMJDPJ_00047	2.43e-240	-	-	-	S	-	-	-	Ser Thr phosphatase family protein
APKMJDPJ_00048	9.37e-228	-	-	-	S	-	-	-	Metalloenzyme superfamily
APKMJDPJ_00049	1e-253	-	-	-	S	-	-	-	Endonuclease Exonuclease phosphatase family
APKMJDPJ_00050	0.0	ahpF	-	-	C	ko:K03387	-	ko00000,ko01000	alkyl hydroperoxide reductase subunit F
APKMJDPJ_00051	1.01e-135	ahpC	1.11.1.15	-	O	ko:K03386	ko04214,map04214	ko00000,ko00001,ko01000,ko04147	Psort location Cytoplasmic, score
APKMJDPJ_00052	7.41e-97	-	-	-	S	-	-	-	Domain of unknown function (DUF4890)
APKMJDPJ_00053	1.43e-124	-	-	-	S	-	-	-	COG NOG28695 non supervised orthologous group
APKMJDPJ_00054	8.89e-101	-	-	-	S	-	-	-	COG NOG31508 non supervised orthologous group
APKMJDPJ_00055	1.66e-121	-	-	-	S	-	-	-	COG NOG31242 non supervised orthologous group
APKMJDPJ_00056	9.76e-298	sdaA	4.3.1.17	-	E	ko:K01752	ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230	ko00000,ko00001,ko01000	COG1760 L-serine deaminase
APKMJDPJ_00057	3.4e-255	corA	-	-	P	ko:K03284	-	ko00000,ko02000	Mediates influx of magnesium ions
APKMJDPJ_00058	0.0	mutS2	-	-	L	ko:K07456	ko03430,map03430	ko00000,ko00001,ko03400	Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
APKMJDPJ_00060	3.04e-297	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
APKMJDPJ_00061	2.79e-120	-	-	-	S	-	-	-	ORF6N domain
APKMJDPJ_00062	5.75e-103	-	-	-	L	-	-	-	DNA repair
APKMJDPJ_00063	1.51e-127	-	-	-	S	-	-	-	antirestriction protein
APKMJDPJ_00065	6.67e-47	-	-	-	S	-	-	-	Domain of unknown function, B. Theta Gene description (DUF3873)
APKMJDPJ_00066	5.22e-117	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_00069	1.16e-35	-	-	-	S	-	-	-	Domain of unknown function, B. Theta Gene description (DUF3872)
APKMJDPJ_00070	0.0	-	-	-	-	-	-	-	-
APKMJDPJ_00071	2.54e-71	-	-	-	-	-	-	-	-
APKMJDPJ_00072	3.66e-98	-	-	-	S	-	-	-	conserved protein found in conjugate transposon
APKMJDPJ_00073	8.93e-141	-	-	-	S	-	-	-	COG NOG19079 non supervised orthologous group
APKMJDPJ_00074	5.35e-215	-	-	-	U	-	-	-	Conjugative transposon TraN protein
APKMJDPJ_00075	2e-302	traM	-	-	S	-	-	-	Conjugative transposon TraM protein
APKMJDPJ_00076	8.06e-64	-	-	-	S	-	-	-	COG NOG30268 non supervised orthologous group
APKMJDPJ_00077	1.52e-144	-	-	-	U	-	-	-	Conjugative transposon TraK protein
APKMJDPJ_00078	1.45e-218	-	-	-	S	-	-	-	Conjugative transposon TraJ protein
APKMJDPJ_00079	8.15e-125	-	-	-	U	-	-	-	COG NOG09946 non supervised orthologous group
APKMJDPJ_00080	1.97e-81	-	-	-	S	-	-	-	to Bacteroides thetaiotaomicron conserved protein found in conjugate transposon BT0092 SWALL AAO75199 (EMBL AE016926) (118 aa) fasta scores E()
APKMJDPJ_00081	0.0	-	-	-	U	-	-	-	Conjugation system ATPase, TraG family
APKMJDPJ_00082	9e-72	-	-	-	S	-	-	-	Conjugative transposon protein TraF
APKMJDPJ_00083	1.72e-59	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
APKMJDPJ_00084	2.46e-158	-	-	-	S	-	-	-	COG NOG24967 non supervised orthologous group
APKMJDPJ_00085	1.17e-96	-	-	-	S	-	-	-	conserved protein found in conjugate transposon
APKMJDPJ_00086	7.72e-179	-	-	-	D	-	-	-	COG NOG26689 non supervised orthologous group
APKMJDPJ_00087	3.97e-62	-	-	-	-	-	-	-	-
APKMJDPJ_00088	6.05e-98	-	-	-	-	-	-	-	-
APKMJDPJ_00089	5.9e-279	-	-	-	U	-	-	-	Relaxase mobilization nuclease domain protein
APKMJDPJ_00090	0.0	-	-	-	U	-	-	-	COG COG3505 Type IV secretory pathway, VirD4 components
APKMJDPJ_00091	8.08e-162	-	-	-	-	-	-	-	-
APKMJDPJ_00092	0.0	-	-	-	V	-	-	-	Pfam:Methyltransf_26
APKMJDPJ_00094	0.0	-	-	-	S	-	-	-	COG NOG09947 non supervised orthologous group
APKMJDPJ_00095	3.26e-32	-	-	-	-	-	-	-	-
APKMJDPJ_00096	0.0	-	5.99.1.2	-	L	ko:K03169	-	ko00000,ko01000,ko03032	COG0550 Topoisomerase IA
APKMJDPJ_00097	2.52e-124	-	-	-	H	-	-	-	RibD C-terminal domain
APKMJDPJ_00098	1.99e-62	-	-	-	S	-	-	-	Helix-turn-helix domain
APKMJDPJ_00099	0.0	-	-	-	L	-	-	-	non supervised orthologous group
APKMJDPJ_00100	5.86e-79	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_00101	8.48e-289	-	-	-	V	-	-	-	MatE
APKMJDPJ_00102	7.04e-201	-	-	-	K	-	-	-	Transcriptional regulator
APKMJDPJ_00103	1.75e-194	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_00104	3.9e-144	-	-	-	-	-	-	-	-
APKMJDPJ_00105	5.29e-285	-	-	-	K	ko:K13652	-	ko00000,ko03000	Bacterial transcription activator, effector binding domain
APKMJDPJ_00106	4.33e-161	-	-	-	K	-	-	-	Pyridoxamine 5'-phosphate oxidase like
APKMJDPJ_00108	4.18e-155	-	3.1.3.18, 3.6.1.1	-	S	ko:K01091,ko:K06019	ko00190,ko00630,ko01100,ko01110,ko01130,map00190,map00630,map01100,map01110,map01130	ko00000,ko00001,ko01000	Phosphoglycolate phosphatase
APKMJDPJ_00109	3.87e-134	-	2.3.1.18, 2.3.1.79	-	S	ko:K00633,ko:K00661	-	ko00000,ko01000	COG0110 Acetyltransferase (isoleucine patch superfamily)
APKMJDPJ_00110	1.78e-202	-	-	-	K	-	-	-	Transcriptional regulator
APKMJDPJ_00111	5.83e-251	-	-	-	-	-	-	-	-
APKMJDPJ_00113	3.19e-192	-	-	-	EG	-	-	-	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_00114	6.05e-133	-	-	-	T	-	-	-	cyclic nucleotide-binding
APKMJDPJ_00115	3.85e-262	yjmD_2	-	-	E	ko:K18369	ko00640,map00640	ko00000,ko00001,ko01000	Psort location Cytoplasmic, score
APKMJDPJ_00116	1.5e-189	spoU	-	-	H	ko:K03437	-	ko00000,ko03016	RNA methyltransferase TrmH family
APKMJDPJ_00117	5.94e-71	-	-	-	O	ko:K03671	ko04621,ko05418,map04621,map05418	ko00000,ko00001,ko03110	Belongs to the thioredoxin family
APKMJDPJ_00118	0.0	-	-	-	P	-	-	-	Sulfatase
APKMJDPJ_00119	0.0	-	-	-	T	-	-	-	His Kinase A (phosphoacceptor) domain
APKMJDPJ_00120	2.68e-225	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_00121	0.0	cadA	3.6.3.3, 3.6.3.5	-	P	ko:K01534	-	ko00000,ko01000	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_00122	2.29e-101	-	-	-	P	ko:K03711	-	ko00000,ko03000	Psort location Cytoplasmic, score 8.96
APKMJDPJ_00123	3.69e-258	-	-	-	M	-	-	-	COG2885 Outer membrane protein and related peptidoglycan-associated
APKMJDPJ_00124	2.62e-85	-	-	-	S	-	-	-	Protein of unknown function, DUF488
APKMJDPJ_00125	0.0	purF	2.4.2.14	-	F	ko:K00764	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko01002	glutamine phosphoribosylpyrophosphate amidotransferase
APKMJDPJ_00126	1.83e-300	pepT	3.4.11.4	-	E	ko:K01258	-	ko00000,ko01000,ko01002	Cleaves the N-terminal amino acid of tripeptides
APKMJDPJ_00127	1.08e-271	gcvT	2.1.2.10	-	H	ko:K00605	ko00260,ko00630,ko00670,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map00670,map01100,map01110,map01130,map01200	ko00000,ko00001,ko00002,ko01000	The glycine cleavage system catalyzes the degradation of glycine
APKMJDPJ_00132	0.0	nhaA	-	-	P	ko:K03455	-	ko00000	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_00133	1.44e-147	-	-	-	E	-	-	-	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_00134	3.97e-125	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_00135	5.57e-214	rfbD	1.1.1.133	-	M	ko:K00067	ko00521,ko00523,ko01130,map00521,map00523,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
APKMJDPJ_00136	0.0	prfC	-	-	J	ko:K02837	-	ko00000,ko03012	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
APKMJDPJ_00138	2.38e-293	ydiI	3.1.2.28	-	Q	ko:K19222	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Psort location Cytoplasmic, score 8.96
APKMJDPJ_00139	2.47e-276	entC	5.4.4.2	-	HQ	ko:K02361,ko:K02552	ko00130,ko01053,ko01100,ko01110,ko01130,map00130,map01053,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Isochorismate synthase
APKMJDPJ_00140	0.0	menD	2.2.1.9	-	H	ko:K02551	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
APKMJDPJ_00141	4.55e-241	-	-	-	-	-	-	-	-
APKMJDPJ_00142	2.52e-199	menB	4.1.3.36	-	H	ko:K01661	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
APKMJDPJ_00143	5.64e-256	menC	-	-	M	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_00144	2.14e-259	menE	6.2.1.26	-	IQ	ko:K01911	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Psort location Cytoplasmic, score 8.96
APKMJDPJ_00145	1.42e-215	-	-	-	S	-	-	-	Endonuclease Exonuclease phosphatase family
APKMJDPJ_00146	0.0	-	3.2.1.20	GH31	S	ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	COG NOG06228 non supervised orthologous group
APKMJDPJ_00147	4.04e-136	-	-	-	K	ko:K03088	-	ko00000,ko03021	RNA polymerase sigma-70 factor, Bacteroides expansion family 1
APKMJDPJ_00148	2.84e-244	-	-	-	PT	-	-	-	Domain of unknown function (DUF4974)
APKMJDPJ_00149	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
APKMJDPJ_00150	0.0	-	-	-	S	-	-	-	non supervised orthologous group
APKMJDPJ_00151	2.17e-270	-	-	-	G	-	-	-	Putative glycoside hydrolase Family 18, chitinase_18
APKMJDPJ_00152	7.11e-277	-	-	-	P	-	-	-	Concanavalin A-like lectin/glucanases superfamily
APKMJDPJ_00153	7.36e-251	-	-	-	S	-	-	-	Domain of unknown function (DUF1735)
APKMJDPJ_00154	1.12e-304	ampG	-	-	EGP	ko:K08218	ko01501,map01501	ko00000,ko00001,ko00002,ko02000	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_00155	2.7e-264	-	2.4.1.319, 2.4.1.320	-	G	ko:K18785	-	ko00000,ko01000	glycosylase
APKMJDPJ_00156	3.98e-111	dps	-	-	P	ko:K04047	-	ko00000,ko03036	Belongs to the Dps family
APKMJDPJ_00157	1.64e-216	oxyR	-	-	K	ko:K04761	ko02026,map02026	ko00000,ko00001,ko03000	Psort location Cytoplasmic, score 9.97
APKMJDPJ_00158	9.06e-181	-	-	-	S	-	-	-	COG NOG31568 non supervised orthologous group
APKMJDPJ_00159	3.23e-127	-	-	-	K	ko:K03088	-	ko00000,ko03021	Belongs to the sigma-70 factor family. ECF subfamily
APKMJDPJ_00160	2.82e-299	-	-	-	S	-	-	-	Outer membrane protein beta-barrel domain
APKMJDPJ_00161	1.51e-179	pflA	1.97.1.4	-	C	ko:K04069	-	ko00000,ko01000	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
APKMJDPJ_00162	0.0	pflB	2.3.1.54	-	C	ko:K00656	ko00620,ko00640,ko00650,ko01100,ko01120,map00620,map00640,map00650,map01100,map01120	ko00000,ko00001,ko01000	Psort location Cytoplasmic, score 9.97
APKMJDPJ_00165	4.93e-105	-	-	-	-	-	-	-	-
APKMJDPJ_00166	0.0	-	-	-	P	-	-	-	TonB-dependent Receptor Plug Domain
APKMJDPJ_00167	9.9e-68	-	-	-	S	-	-	-	Bacterial PH domain
APKMJDPJ_00168	0.0	-	3.2.1.20	GH31	G	ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 31 family
APKMJDPJ_00169	4.45e-99	-	-	-	MP	ko:K06079	ko01503,map01503	ko00000,ko00001	COG NOG29769 non supervised orthologous group
APKMJDPJ_00170	9.21e-287	corC_1	-	-	P	ko:K03699	-	ko00000,ko02042	Psort location CytoplasmicMembrane, score
APKMJDPJ_00171	1.38e-183	loiP	-	-	M	ko:K07387	-	ko00000,ko01000,ko01002	COG0501 Zn-dependent protease with chaperone function
APKMJDPJ_00172	0.0	-	-	-	P	-	-	-	Psort location OuterMembrane, score
APKMJDPJ_00173	4.79e-104	-	-	-	S	-	-	-	COG NOG29214 non supervised orthologous group
APKMJDPJ_00174	1.21e-205	-	3.1.2.12	CE1	S	ko:K01070	ko00680,ko01120,ko01200,map00680,map01120,map01200	ko00000,ko00001,ko01000	esterase
APKMJDPJ_00175	6.78e-187	-	-	-	S	-	-	-	COG NOG30864 non supervised orthologous group
APKMJDPJ_00176	1.32e-306	metY	2.5.1.49	-	E	ko:K01740	ko00270,ko01100,map00270,map01100	ko00000,ko00001,ko01000	Psort location Cytoplasmic, score
APKMJDPJ_00177	2.16e-267	trmU	2.8.1.13	-	J	ko:K00566	ko04122,map04122	ko00000,ko00001,ko01000,ko03016	Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
APKMJDPJ_00178	2.58e-154	narL	-	-	K	-	-	-	COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
APKMJDPJ_00179	4.35e-109	-	-	-	S	-	-	-	COG NOG27363 non supervised orthologous group
APKMJDPJ_00180	0.0	nhaC	-	-	C	ko:K03315	-	ko00000,ko02000	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_00181	2.25e-188	-	-	-	S	-	-	-	VIT family
APKMJDPJ_00182	2.49e-100	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 9.46
APKMJDPJ_00183	7.13e-273	ynfM	-	-	EGP	ko:K08224	-	ko00000,ko02000	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_00184	0.0	pbpC	2.4.1.129	GT51	M	ko:K05367	ko00550,map00550	ko00000,ko00001,ko01000,ko01003,ko01011	COG4953 Membrane carboxypeptidase penicillin-binding protein PbpC
APKMJDPJ_00185	0.0	-	-	-	S	ko:K06894	-	ko00000	COG2373 Large extracellular alpha-helical protein
APKMJDPJ_00186	0.0	tilS	6.3.4.19	-	D	ko:K04075	-	ko00000,ko01000,ko03016	Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
APKMJDPJ_00187	0.0	feoB	-	-	P	ko:K04759	-	ko00000,ko02000	transporter of a GTP-driven Fe(2 ) uptake system
APKMJDPJ_00188	1.72e-44	-	-	-	-	-	-	-	-
APKMJDPJ_00190	7.73e-176	-	-	-	S	-	-	-	Fic/DOC family
APKMJDPJ_00192	1.59e-32	-	-	-	-	-	-	-	-
APKMJDPJ_00193	0.0	-	-	-	-	-	-	-	-
APKMJDPJ_00194	1.74e-285	-	-	-	S	-	-	-	amine dehydrogenase activity
APKMJDPJ_00195	2.64e-244	-	-	-	S	-	-	-	amine dehydrogenase activity
APKMJDPJ_00196	5.36e-247	-	-	-	S	-	-	-	amine dehydrogenase activity
APKMJDPJ_00197	5.09e-119	-	-	-	K	-	-	-	Transcription termination factor nusG
APKMJDPJ_00198	7.73e-109	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_00199	0.0	-	-	-	S	-	-	-	Polysaccharide biosynthesis protein
APKMJDPJ_00200	2.2e-277	glf	5.4.99.9	-	M	ko:K01854	ko00052,ko00520,map00052,map00520	ko00000,ko00001,ko01000	UDP-galactopyranose mutase
APKMJDPJ_00201	3.93e-216	-	-	-	M	-	-	-	Glycosyltransferase, group 2 family protein
APKMJDPJ_00202	1.22e-305	-	-	-	-	-	-	-	-
APKMJDPJ_00203	3.88e-256	-	-	-	M	-	-	-	Polysaccharide pyruvyl transferase
APKMJDPJ_00204	3.27e-277	-	-	-	M	-	-	-	Glycosyl transferases group 1
APKMJDPJ_00205	4.72e-201	-	-	-	M	-	-	-	Glycosyltransferase, group 2 family protein
APKMJDPJ_00206	4.14e-297	-	2.6.1.59	-	E	ko:K02805	-	ko00000,ko01000,ko01007	Belongs to the DegT DnrJ EryC1 family
APKMJDPJ_00207	6e-136	-	-	-	M	-	-	-	Psort location CytoplasmicMembrane, score
APKMJDPJ_00209	1.93e-138	-	-	-	CO	-	-	-	Redoxin family
APKMJDPJ_00210	0.0	-	-	-	P	-	-	-	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_00211	5.04e-174	cypM_1	-	-	H	-	-	-	Methyltransferase domain protein
APKMJDPJ_00212	4.09e-35	-	-	-	-	-	-	-	-
APKMJDPJ_00213	5.26e-92	gloA	4.4.1.5	-	E	ko:K01759	ko00620,map00620	ko00000,ko00001,ko01000	Psort location Cytoplasmic, score 8.96
APKMJDPJ_00214	1.06e-256	-	-	-	S	ko:K03646	-	ko00000,ko02000	Domain of unknown function (DUF4468) with TBP-like fold
APKMJDPJ_00215	2.06e-177	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_00216	7.5e-177	pdxH	1.4.3.5	-	H	ko:K00275	ko00750,ko01100,ko01120,map00750,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP)
APKMJDPJ_00217	2.61e-172	-	-	-	S	ko:K06911	-	ko00000	Belongs to the pirin family
APKMJDPJ_00218	0.0	-	-	-	K	-	-	-	transcriptional regulator (AraC
APKMJDPJ_00219	1.1e-126	-	-	-	S	-	-	-	Chagasin family peptidase inhibitor I42
APKMJDPJ_00220	3.89e-241	ldhA	1.1.1.28	-	C	ko:K03778	ko00620,ko01120,map00620,map01120	ko00000,ko00001,ko01000	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
APKMJDPJ_00221	0.0	-	-	-	I	ko:K06076	-	ko00000,ko02000	COG COG2067 Long-chain fatty acid transport protein
APKMJDPJ_00222	2.08e-11	-	-	-	S	-	-	-	aa) fasta scores E()
APKMJDPJ_00224	0.0	-	-	-	S	-	-	-	COG NOG10142 non supervised orthologous group
APKMJDPJ_00225	1.66e-117	-	-	-	K	ko:K03088	-	ko00000,ko03021	Belongs to the sigma-70 factor family. ECF subfamily
APKMJDPJ_00226	1.61e-153	yhhQ	-	-	S	ko:K09125	-	ko00000	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
APKMJDPJ_00227	5.5e-162	queC	6.3.4.20	-	F	ko:K06920	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko01000,ko03016	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
APKMJDPJ_00228	5.1e-111	queF	1.7.1.13	-	H	ko:K09457	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko01000,ko03016	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
APKMJDPJ_00229	1.56e-108	rlmH	2.1.1.177	-	J	ko:K00783	-	ko00000,ko01000,ko03009	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
APKMJDPJ_00230	8.98e-86	-	-	-	S	-	-	-	COG NOG32209 non supervised orthologous group
APKMJDPJ_00231	1.19e-195	nadC	2.4.2.19	-	H	ko:K00767	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the NadC ModD family
APKMJDPJ_00232	9.61e-123	-	-	-	K	ko:K03088	-	ko00000,ko03021	Belongs to the sigma-70 factor family. ECF subfamily
APKMJDPJ_00233	2.27e-213	-	-	-	K	-	-	-	COG NOG25837 non supervised orthologous group
APKMJDPJ_00234	7.27e-127	-	-	-	S	-	-	-	COG NOG28799 non supervised orthologous group
APKMJDPJ_00235	9.79e-168	-	-	-	S	-	-	-	COG NOG28261 non supervised orthologous group
APKMJDPJ_00236	5.37e-221	fabK	1.3.1.9	-	C	ko:K02371	ko00061,ko01100,ko01212,map00061,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	related to 2-nitropropane dioxygenase
APKMJDPJ_00237	2.08e-264	ald	1.4.1.1	-	C	ko:K00259	ko00250,ko00430,ko01100,map00250,map00430,map01100	ko00000,ko00001,ko01000	Belongs to the AlaDH PNT family
APKMJDPJ_00238	0.0	-	-	-	M	-	-	-	Peptidase, M23 family
APKMJDPJ_00239	0.0	-	-	-	M	-	-	-	Dipeptidase
APKMJDPJ_00240	0.0	pgcA	5.4.2.2	-	G	ko:K01835	ko00010,ko00030,ko00052,ko00230,ko00500,ko00520,ko00521,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00052,map00230,map00500,map00520,map00521,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Phosphoglucomutase phosphomannomutase, alpha beta alpha domain II
APKMJDPJ_00241	4.77e-136	-	-	-	K	ko:K03088	-	ko00000,ko03021	RNA polymerase sigma-70 factor, Bacteroides expansion family 1
APKMJDPJ_00242	2.39e-227	-	-	-	PT	-	-	-	COG3712 Fe2 -dicitrate sensor, membrane component
APKMJDPJ_00243	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
APKMJDPJ_00244	0.0	-	-	-	F	ko:K21572	-	ko00000,ko02000	Pfam:SusD
APKMJDPJ_00245	1.45e-97	-	-	-	-	-	-	-	-
APKMJDPJ_00246	0.0	-	3.2.1.22	-	G	ko:K07407	ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603	ko00000,ko00001,ko01000	alpha-galactosidase
APKMJDPJ_00248	3.65e-220	-	4.1.1.22	-	E	ko:K01590	ko00340,ko01100,ko01110,map00340,map01100,map01110	ko00000,ko00001,ko01000	Histidine carboxylase PI chain
APKMJDPJ_00249	7.82e-196	nudC	3.6.1.22	-	L	ko:K03426	ko00760,ko01100,ko04146,map00760,map01100,map04146	ko00000,ko00001,ko01000	COG COG2816 NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding
APKMJDPJ_00250	0.0	-	-	-	S	-	-	-	COG COG0488 ATPase components of ABC transporters with duplicated ATPase domains
APKMJDPJ_00251	0.0	merA	-	-	C	ko:K21739	-	ko00000	COG COG1249 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes
APKMJDPJ_00252	3.2e-138	ykgB	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 9.46
APKMJDPJ_00253	4.01e-187	-	-	-	K	-	-	-	Helix-turn-helix domain
APKMJDPJ_00254	9.81e-106	cdd	3.5.4.5	-	F	ko:K01489	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis
APKMJDPJ_00255	1.87e-218	lytG	-	-	MNU	-	-	-	COG1705 Muramidase (flagellum-specific)
APKMJDPJ_00256	1.11e-280	-	-	-	M	ko:K02005	-	ko00000	Efflux transporter, RND family, MFP subunit
APKMJDPJ_00257	3.61e-305	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	MacB-like periplasmic core domain
APKMJDPJ_00258	3.35e-306	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	FtsX-like permease family
APKMJDPJ_00259	5.17e-314	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	COG0577 ABC-type antimicrobial peptide transport system permease component
APKMJDPJ_00260	1.08e-315	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_00261	2.12e-311	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	COG0577 ABC-type antimicrobial peptide transport system permease component
APKMJDPJ_00262	8.65e-314	-	-	-	V	-	-	-	ABC transporter permease
APKMJDPJ_00263	4.41e-217	-	-	-	K	-	-	-	transcriptional regulator (AraC family)
APKMJDPJ_00264	9.03e-153	ytrE_3	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	Psort location CytoplasmicMembrane, score 7.88
APKMJDPJ_00265	4.3e-294	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	COG0577 ABC-type antimicrobial peptide transport system permease component
APKMJDPJ_00266	3.04e-253	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	Psort location CytoplasmicMembrane, score
APKMJDPJ_00267	5.23e-152	ytrE_3	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	Psort location CytoplasmicMembrane, score 7.88
APKMJDPJ_00268	3.79e-137	-	-	-	S	-	-	-	COG NOG30399 non supervised orthologous group
APKMJDPJ_00269	4.61e-309	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_00270	5.04e-297	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	Psort location CytoplasmicMembrane, score
APKMJDPJ_00271	0.0	-	-	-	T	-	-	-	Psort location CytoplasmicMembrane, score
APKMJDPJ_00272	0.0	-	-	-	MU	-	-	-	Psort location OuterMembrane, score
APKMJDPJ_00273	6.32e-168	-	-	-	T	ko:K02481	-	ko00000,ko02022	acetoacetate metabolism regulatory protein AtoC K07714
APKMJDPJ_00274	1.8e-106	-	-	-	T	ko:K02481	-	ko00000,ko02022	acetoacetate metabolism regulatory protein AtoC K07714
APKMJDPJ_00275	1.41e-302	-	-	-	T	-	-	-	ATPase histidine kinase DNA gyrase B HSP90 domain protein
APKMJDPJ_00276	0.0	aspD	4.1.1.12	-	E	ko:K09758	ko00250,ko00270,ko01100,ko01230,map00250,map00270,map01100,map01230	ko00000,ko00001,ko01000	COG COG0436 Aspartate tyrosine aromatic aminotransferase
APKMJDPJ_00277	0.0	aspT	-	-	S	ko:K07085	-	ko00000	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_00278	6.1e-216	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_00280	0.0	hsdR	3.1.21.3	-	L	ko:K01153	-	ko00000,ko01000,ko02048	COG COG4096 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases
APKMJDPJ_00281	2.23e-163	hsdM	2.1.1.72	-	V	ko:K03427	-	ko00000,ko01000,ko02048	HsdM N-terminal domain
APKMJDPJ_00282	6.45e-241	-	-	-	N	-	-	-	bacterial-type flagellum assembly
APKMJDPJ_00283	2.09e-104	-	-	-	S	ko:K07341	-	ko00000,ko02048	Fic/DOC family
APKMJDPJ_00284	4.09e-211	-	3.1.21.3	-	V	ko:K01154	-	ko00000,ko01000,ko02048	Type I restriction modification DNA specificity domain
APKMJDPJ_00285	8.16e-86	-	-	-	L	-	-	-	PFAM Integrase catalytic
APKMJDPJ_00286	4.93e-69	-	-	-	-	-	-	-	-
APKMJDPJ_00290	3.49e-118	-	-	-	S	-	-	-	Domain of unknown function (DUF4373)
APKMJDPJ_00291	4.9e-263	-	-	-	L	-	-	-	Domain of unknown function (DUF4373)
APKMJDPJ_00293	4.12e-228	-	-	-	L	-	-	-	CHC2 zinc finger
APKMJDPJ_00294	6.87e-172	-	-	-	S	-	-	-	Protein of unknown function (DUF2786)
APKMJDPJ_00297	5.09e-78	-	-	-	-	-	-	-	-
APKMJDPJ_00298	4.61e-67	-	-	-	-	-	-	-	-
APKMJDPJ_00301	2.55e-65	-	-	-	S	-	-	-	Domain of unknown function (DUF3127)
APKMJDPJ_00302	2.22e-126	-	-	-	M	-	-	-	(189 aa) fasta scores E()
APKMJDPJ_00303	0.0	-	-	-	M	-	-	-	chlorophyll binding
APKMJDPJ_00304	2.65e-215	-	-	-	-	-	-	-	-
APKMJDPJ_00305	2.71e-233	-	-	-	S	-	-	-	Fimbrillin-like
APKMJDPJ_00306	0.0	-	-	-	S	-	-	-	Putative binding domain, N-terminal
APKMJDPJ_00307	6.41e-193	-	-	-	S	-	-	-	Fimbrillin-like
APKMJDPJ_00308	7.41e-65	-	-	-	-	-	-	-	-
APKMJDPJ_00309	2.86e-74	-	-	-	-	-	-	-	-
APKMJDPJ_00310	0.0	-	-	-	U	-	-	-	conjugation system ATPase, TraG family
APKMJDPJ_00311	3.67e-108	-	-	-	-	-	-	-	-
APKMJDPJ_00312	3.09e-167	-	-	-	-	-	-	-	-
APKMJDPJ_00313	5.26e-148	-	-	-	-	-	-	-	-
APKMJDPJ_00314	6.47e-219	-	-	-	S	-	-	-	Conjugative transposon, TraM
APKMJDPJ_00317	4.99e-113	-	-	-	-	-	-	-	-
APKMJDPJ_00318	2.04e-274	-	-	-	U	-	-	-	Domain of unknown function (DUF4138)
APKMJDPJ_00319	5.22e-131	-	-	-	M	-	-	-	Peptidase family M23
APKMJDPJ_00320	8.53e-76	-	-	-	-	-	-	-	-
APKMJDPJ_00321	9.38e-59	-	-	-	K	-	-	-	DNA-binding transcription factor activity
APKMJDPJ_00322	0.0	-	-	-	S	-	-	-	regulation of response to stimulus
APKMJDPJ_00323	0.0	-	-	-	S	-	-	-	Fimbrillin-like
APKMJDPJ_00324	8.13e-62	-	-	-	-	-	-	-	-
APKMJDPJ_00325	1.69e-188	-	-	-	D	ko:K03496	-	ko00000,ko03036,ko04812	Cellulose biosynthesis protein BcsQ
APKMJDPJ_00327	2.95e-54	-	-	-	-	-	-	-	-
APKMJDPJ_00328	5.17e-211	-	-	-	L	-	-	-	D12 class N6 adenine-specific DNA methyltransferase
APKMJDPJ_00329	1.52e-245	-	3.5.1.24	-	M	ko:K01442	ko00120,ko00121,ko01100,map00120,map00121,map01100	ko00000,ko00001,ko01000	Linear amide C-N hydrolase, choloylglycine hydrolase family protein
APKMJDPJ_00331	0.0	-	-	-	M	-	-	-	COG NOG07608 non supervised orthologous group
APKMJDPJ_00332	0.0	-	-	-	F	ko:K21572	-	ko00000,ko02000	SusD family
APKMJDPJ_00333	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
APKMJDPJ_00334	6.64e-233	-	-	-	PT	-	-	-	Sigma factor regulatory protein, FecR PupR family
APKMJDPJ_00335	1.26e-137	-	-	-	K	ko:K03088	-	ko00000,ko03021	RNA polymerase sigma-70 factor
APKMJDPJ_00337	1.41e-84	-	-	-	-	-	-	-	-
APKMJDPJ_00338	1.43e-81	-	-	-	-	-	-	-	-
APKMJDPJ_00339	0.0	-	-	-	KL	-	-	-	CRISPR-associated helicase, Cas3
APKMJDPJ_00340	2.7e-83	-	-	-	-	-	-	-	-
APKMJDPJ_00341	0.0	-	-	-	U	-	-	-	TraM recognition site of TraD and TraG
APKMJDPJ_00342	6.36e-230	-	-	-	-	-	-	-	-
APKMJDPJ_00343	3.96e-120	-	-	-	-	-	-	-	-
APKMJDPJ_00344	3.28e-231	-	-	-	S	-	-	-	Putative amidoligase enzyme
APKMJDPJ_00345	5.47e-55	-	-	-	-	-	-	-	-
APKMJDPJ_00346	6.46e-12	-	-	-	-	-	-	-	-
APKMJDPJ_00347	4.82e-164	-	-	-	V	-	-	-	MatE
APKMJDPJ_00348	5.54e-155	-	-	-	S	ko:K18234	-	ko00000,ko01000,ko01504	Bacterial transferase hexapeptide repeat protein
APKMJDPJ_00349	6.58e-293	-	-	-	T	-	-	-	ATPase histidine kinase DNA gyrase B HSP90 domain protein
APKMJDPJ_00350	0.0	zraR	-	-	T	ko:K07713	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	acetoacetate metabolism regulatory protein AtoC K07714
APKMJDPJ_00351	2.51e-159	-	-	-	-	-	-	-	-
APKMJDPJ_00352	1.05e-235	-	-	-	S	-	-	-	Protein of unknown function DUF262
APKMJDPJ_00354	9.45e-178	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
APKMJDPJ_00355	0.0	-	-	-	L	-	-	-	Integrase core domain
APKMJDPJ_00356	5.56e-180	-	-	-	L	-	-	-	IstB-like ATP binding protein
APKMJDPJ_00357	9.62e-51	-	-	-	V	-	-	-	Type I restriction modification DNA specificity domain
APKMJDPJ_00358	1.53e-213	-	3.1.21.3	-	V	ko:K01154	-	ko00000,ko01000,ko02048	Type I restriction modification DNA specificity domain protein
APKMJDPJ_00359	6.37e-190	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
APKMJDPJ_00361	1.74e-131	-	-	-	-	-	-	-	-
APKMJDPJ_00363	2.38e-307	-	-	-	-	-	-	-	-
APKMJDPJ_00365	2.62e-80	-	-	-	S	-	-	-	WYL_2, Sm-like SH3 beta-barrel fold
APKMJDPJ_00366	1.96e-135	-	-	-	K	-	-	-	Transcription termination antitermination factor NusG
APKMJDPJ_00367	6.32e-114	-	-	-	S	-	-	-	UpxZ family of transcription anti-terminator antagonists
APKMJDPJ_00368	2.76e-214	rfbA	2.7.7.24	-	H	ko:K00973	ko00521,ko00523,ko00525,ko01130,map00521,map00523,map00525,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
APKMJDPJ_00369	2.03e-141	rfbC	5.1.3.13	-	G	ko:K01790	ko00521,ko00523,ko01130,map00521,map00523,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
APKMJDPJ_00370	3.2e-93	-	-	-	V	-	-	-	HNH endonuclease
APKMJDPJ_00371	0.0	-	1.1.1.22	-	C	ko:K00012	ko00040,ko00053,ko00520,ko01100,map00040,map00053,map00520,map01100	ko00000,ko00001,ko00002,ko01000	UDP binding domain
APKMJDPJ_00372	6.36e-231	-	4.1.1.35	-	GM	ko:K08678	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko00002,ko01000	NAD dependent epimerase dehydratase family
APKMJDPJ_00373	0.0	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_00375	2.4e-230	-	-	-	M	-	-	-	Glycosyl transferase family 8
APKMJDPJ_00376	1.14e-226	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_00377	6.46e-244	-	-	-	-	-	-	-	-
APKMJDPJ_00378	4.65e-186	-	-	-	M	-	-	-	transferase activity, transferring glycosyl groups
APKMJDPJ_00379	1.94e-269	-	-	-	-	-	-	-	-
APKMJDPJ_00380	2.95e-195	-	-	-	M	-	-	-	Glycosyltransferase like family 2
APKMJDPJ_00381	4.05e-204	-	-	-	S	ko:K07011	-	ko00000	Glycosyl transferase family 2
APKMJDPJ_00382	2.35e-217	-	5.1.3.26	-	M	ko:K19997	-	ko00000,ko01000	to Edwardsiella ictaluri UDP-glucose 4-epimerase WbeIT SWALL Q937X6 (EMBL AY057452) (323 aa) fasta scores E()
APKMJDPJ_00383	8.25e-221	wcgX	2.7.8.33, 2.7.8.35	-	M	ko:K02851	-	ko00000,ko01000,ko01003,ko01005	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_00384	0.0	rng	-	-	J	ko:K08301	-	ko00000,ko01000,ko03009,ko03019	S1 RNA binding domain
APKMJDPJ_00385	1.17e-56	hupA	-	-	L	ko:K03530	-	ko00000,ko03032,ko03036,ko03400	Belongs to the bacterial histone-like protein family
APKMJDPJ_00386	2.05e-258	mutY	-	-	L	ko:K03575	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	COG1194 A G-specific DNA glycosylase
APKMJDPJ_00387	0.0	arsA	-	-	P	-	-	-	COG COG3119 Arylsulfatase A and related enzymes
APKMJDPJ_00388	3.44e-105	ssb	-	-	L	ko:K03111	ko03030,ko03430,ko03440,map03030,map03430,map03440	ko00000,ko00001,ko03029,ko03032,ko03400	Single-stranded DNA-binding protein
APKMJDPJ_00389	2.12e-304	gldE	-	-	S	-	-	-	Gliding motility-associated protein GldE
APKMJDPJ_00390	4.34e-166	-	-	-	H	-	-	-	4'-phosphopantetheinyl transferase superfamily
APKMJDPJ_00391	0.0	-	-	-	P	-	-	-	TonB-dependent Receptor Plug Domain
APKMJDPJ_00392	2.32e-47	-	-	-	S	-	-	-	Divergent 4Fe-4S mono-cluster
APKMJDPJ_00393	2.18e-211	-	-	-	-	-	-	-	-
APKMJDPJ_00394	2.59e-250	-	-	-	-	-	-	-	-
APKMJDPJ_00395	3.21e-243	-	-	-	-	-	-	-	-
APKMJDPJ_00396	0.0	-	-	-	-	-	-	-	-
APKMJDPJ_00397	0.0	-	-	-	T	-	-	-	Domain of unknown function (DUF5074)
APKMJDPJ_00398	0.0	-	-	-	S	-	-	-	COG NOG23380 non supervised orthologous group
APKMJDPJ_00399	0.0	-	-	-	H	-	-	-	COG4206 Outer membrane cobalamin receptor protein
APKMJDPJ_00402	4.13e-228	-	-	-	CO	-	-	-	COG NOG24939 non supervised orthologous group
APKMJDPJ_00403	0.0	-	-	-	C	-	-	-	Domain of unknown function (DUF4132)
APKMJDPJ_00404	0.0	-	2.7.13.3	-	T	ko:K02484,ko:K07636	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	ATPase histidine kinase DNA gyrase B HSP90 domain protein
APKMJDPJ_00405	2.3e-159	srrA	-	-	K	ko:K07657,ko:K07658	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
APKMJDPJ_00406	1.03e-285	-	-	-	L	-	-	-	COG NOG06399 non supervised orthologous group
APKMJDPJ_00407	0.0	-	-	-	S	-	-	-	Capsule assembly protein Wzi
APKMJDPJ_00408	8.72e-78	-	-	-	S	-	-	-	Lipocalin-like domain
APKMJDPJ_00409	1.93e-204	-	-	-	S	-	-	-	COG NOG25193 non supervised orthologous group
APKMJDPJ_00410	0.0	yfmR	-	-	S	ko:K15738	-	ko00000,ko02000	ABC transporter, ATP-binding protein
APKMJDPJ_00411	7.03e-212	-	3.1.3.15	-	E	ko:K04486	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Psort location Cytoplasmic, score 8.96
APKMJDPJ_00412	1.27e-217	-	-	-	G	-	-	-	Psort location Extracellular, score
APKMJDPJ_00413	0.0	-	4.2.2.5	PL8	N	ko:K19049	-	ko00000,ko01000	Polysaccharide lyase family 8, super-sandwich domain protein
APKMJDPJ_00414	2.93e-299	-	-	-	G	-	-	-	COG2407 L-fucose isomerase and related
APKMJDPJ_00415	1.74e-294	aspC	2.6.1.1, 2.6.1.2, 2.6.1.66	-	E	ko:K00812,ko:K14260	ko00220,ko00250,ko00270,ko00290,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00290,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko01000,ko01007	Aminotransferase, class I II
APKMJDPJ_00416	6.5e-294	lolE_1	-	-	M	ko:K09808	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG4591 ABC-type transport system, involved in lipoprotein release, permease component
APKMJDPJ_00417	1.11e-163	-	-	-	M	-	-	-	Glycosyltransferase, group 2 family protein
APKMJDPJ_00418	1.43e-225	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_00419	5.54e-270	-	-	-	T	-	-	-	COG5000 Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation
APKMJDPJ_00420	0.0	-	-	-	T	-	-	-	COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains
APKMJDPJ_00421	5.15e-305	-	-	-	MU	ko:K12340	ko01501,ko01503,ko02020,ko03070,ko04626,ko05133,map01501,map01503,map02020,map03070,map04626,map05133	ko00000,ko00001,ko00002,ko01504,ko02000,ko02044	outer membrane efflux protein
APKMJDPJ_00422	2.48e-293	-	-	-	M	ko:K02005	-	ko00000	Efflux transporter, RND family, MFP subunit
APKMJDPJ_00423	0.0	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	MacB-like periplasmic core domain
APKMJDPJ_00424	2.12e-164	-	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
APKMJDPJ_00425	0.0	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter, permease protein
APKMJDPJ_00426	0.0	ndh	1.6.99.3	-	C	ko:K03885	ko00190,map00190	ko00000,ko00001,ko01000	NADH dehydrogenase, FAD-containing subunit
APKMJDPJ_00427	1.4e-152	bioD	6.3.3.3	-	H	ko:K01935	ko00780,ko01100,map00780,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
APKMJDPJ_00428	0.0	bioC	2.1.1.197, 3.1.1.85	-	H	ko:K02169,ko:K09789	ko00780,ko01100,map00780,map01100	ko00000,ko00001,ko00002,ko01000	Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl- L-methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway
APKMJDPJ_00429	3.31e-282	bioF	2.3.1.29, 2.3.1.47	-	H	ko:K00639,ko:K00652	ko00260,ko00780,ko01100,map00260,map00780,map01100	ko00000,ko00001,ko00002,ko01000,ko01007	COG COG0156 7-keto-8-aminopelargonate synthetase and related enzymes
APKMJDPJ_00430	0.0	bioA	2.6.1.62	-	H	ko:K00833	ko00780,ko01100,map00780,map01100	ko00000,ko00001,ko00002,ko01000,ko01007	the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a
APKMJDPJ_00431	9.48e-10	-	-	-	-	-	-	-	-
APKMJDPJ_00432	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
APKMJDPJ_00433	0.0	-	-	-	S	ko:K21572	-	ko00000,ko02000	Pfam:SusD
APKMJDPJ_00434	4.92e-227	lctP	-	-	C	ko:K03303	-	ko00000,ko02000	L-lactate permease
APKMJDPJ_00435	0.0	-	-	-	M	-	-	-	COG NOG23378 non supervised orthologous group
APKMJDPJ_00436	5.58e-151	-	-	-	M	-	-	-	non supervised orthologous group
APKMJDPJ_00437	0.0	-	2.1.3.15, 6.4.1.3	-	I	ko:K01966	ko00280,ko00630,ko00640,ko01100,ko01120,ko01130,ko01200,map00280,map00630,map00640,map01100,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	COG COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta)
APKMJDPJ_00438	0.0	-	6.3.4.14, 6.4.1.2, 6.4.1.3	-	I	ko:K01961,ko:K01965	ko00061,ko00280,ko00620,ko00630,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00280,map00620,map00630,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002,ko01000	Biotin carboxylase
APKMJDPJ_00439	8.41e-119	-	6.4.1.1	-	I	ko:K01960	ko00020,ko00620,ko00720,ko01100,ko01120,ko01200,ko01230,map00020,map00620,map00720,map01100,map01120,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Biotin carboxyl carrier protein
APKMJDPJ_00440	2.1e-308	-	-	-	Q	-	-	-	Amidohydrolase family
APKMJDPJ_00443	5.4e-47	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_00444	0.0	lpdA	1.8.1.4	-	C	ko:K00382	ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000,ko04147	Dihydrolipoyl dehydrogenase
APKMJDPJ_00445	2.14e-166	lplA	6.3.1.20	-	H	ko:K03800	ko00785,ko01100,map00785,map01100	ko00000,ko00001,ko01000	Lipoate-protein ligase
APKMJDPJ_00446	9.09e-314	bfmBB	2.3.1.61	-	C	ko:K00658	ko00020,ko00310,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00310,map01100,map01110,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000	Psort location Cytoplasmic, score 9.26
APKMJDPJ_00447	0.0	bfmBAB	1.2.4.4	-	C	ko:K11381	ko00280,ko00640,ko01100,ko01110,ko01130,map00280,map00640,map01100,map01110,map01130	br01601,ko00000,ko00001,ko00002,ko01000	dehydrogenase E1 component
APKMJDPJ_00448	2.26e-120	isiB	-	-	C	ko:K03839	-	ko00000	Low-potential electron donor to a number of redox enzymes
APKMJDPJ_00449	2.35e-207	prmA	-	-	J	ko:K02687	-	ko00000,ko01000,ko03009	Methylates ribosomal protein L11
APKMJDPJ_00450	2.05e-63	-	-	-	-	-	-	-	-
APKMJDPJ_00451	0.0	-	-	-	S	-	-	-	pyrogenic exotoxin B
APKMJDPJ_00453	1.72e-82	-	-	-	-	-	-	-	-
APKMJDPJ_00454	4.44e-223	-	-	-	S	-	-	-	Psort location OuterMembrane, score
APKMJDPJ_00455	0.0	-	-	-	I	-	-	-	Psort location OuterMembrane, score
APKMJDPJ_00456	7.96e-104	guaD	3.5.4.3	-	FJ	ko:K01487	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000	Cytidine and deoxycytidylate deaminase zinc-binding region
APKMJDPJ_00457	1.23e-222	-	-	-	-	-	-	-	-
APKMJDPJ_00458	4.05e-98	-	-	-	-	-	-	-	-
APKMJDPJ_00459	1.02e-94	-	-	-	C	-	-	-	lyase activity
APKMJDPJ_00460	4.33e-116	-	-	-	K	ko:K03088	-	ko00000,ko03021	Belongs to the sigma-70 factor family. ECF subfamily
APKMJDPJ_00461	2.32e-195	-	-	-	ET	-	-	-	COG0834 ABC-type amino acid transport signal transduction systems periplasmic component domain
APKMJDPJ_00462	0.0	-	-	-	H	-	-	-	COG NOG07963 non supervised orthologous group
APKMJDPJ_00463	1.5e-124	porG	1.2.7.3	-	C	ko:K00177	ko00020,ko00720,ko01100,ko01120,ko01200,map00020,map00720,map01100,map01120,map01200	br01601,ko00000,ko00001,ko00002,ko01000	2-oxoacid ferredoxin flavodoxin oxidoreductase, gamma subunit
APKMJDPJ_00464	6.67e-189	vorA	1.2.7.11, 1.2.7.3	-	C	ko:K00175	ko00010,ko00020,ko00620,ko00650,ko00720,ko01100,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00650,map00720,map01100,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
APKMJDPJ_00465	1.34e-31	-	-	-	-	-	-	-	-
APKMJDPJ_00466	2.39e-254	vorB	1.2.7.11, 1.2.7.3	-	C	ko:K00174	ko00010,ko00020,ko00620,ko00650,ko00720,ko01100,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00650,map00720,map01100,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000	COG0674 Pyruvate ferredoxin oxidoreductase and related 2-oxoacid ferredoxin
APKMJDPJ_00467	2.78e-32	oorD	1.2.7.3	-	C	ko:K00176	ko00020,ko00720,ko01100,ko01120,ko01200,map00020,map00720,map01100,map01120,map01200	br01601,ko00000,ko00001,ko00002,ko01000	4Fe-4S binding domain protein
APKMJDPJ_00468	7.29e-60	-	-	-	S	-	-	-	Tetratricopeptide repeat protein
APKMJDPJ_00469	6.81e-108	rpiB	5.3.1.6	-	G	ko:K01808	ko00030,ko00051,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00051,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Ribose 5-phosphate isomerase
APKMJDPJ_00470	0.0	tkt	2.2.1.1	-	H	ko:K00615	ko00030,ko00710,ko01051,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01051,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the transketolase family
APKMJDPJ_00471	1.52e-285	galK	2.7.1.6	-	H	ko:K00849	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the GHMP kinase family. GalK subfamily
APKMJDPJ_00472	2.83e-316	gluP	-	-	G	ko:K02429	-	ko00000,ko02000	Transporter, major facilitator family protein
APKMJDPJ_00473	1.07e-273	galM	5.1.3.3	-	G	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Converts alpha-aldose to the beta-anomer
APKMJDPJ_00474	1.35e-239	manA	5.3.1.8	-	G	ko:K01809	ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Psort location Cytoplasmic, score 8.96
APKMJDPJ_00475	2.83e-53	-	-	-	S	-	-	-	COG NOG35393 non supervised orthologous group
APKMJDPJ_00476	3.92e-69	-	-	-	S	-	-	-	COG NOG30994 non supervised orthologous group
APKMJDPJ_00477	4.14e-38	-	-	-	S	-	-	-	COG NOG35214 non supervised orthologous group
APKMJDPJ_00478	1.85e-301	rhlE	3.6.4.13	-	JKL	ko:K11927	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	Belongs to the DEAD box helicase family
APKMJDPJ_00479	1.44e-180	ydfG	-	-	S	-	-	-	Belongs to the short-chain dehydrogenases reductases (SDR) family
APKMJDPJ_00480	9.56e-107	-	-	-	D	-	-	-	Sporulation and cell division repeat protein
APKMJDPJ_00481	5.39e-194	-	-	-	Q	-	-	-	COG NOG10855 non supervised orthologous group
APKMJDPJ_00482	0.0	lacZ_17	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 2 family
APKMJDPJ_00483	4.88e-196	cysQ	3.1.3.7	-	P	ko:K01082	ko00920,ko01100,ko01120,ko01130,map00920,map01100,map01120,map01130	ko00000,ko00001,ko01000,ko03016	3'(2'),5'-bisphosphate nucleotidase
APKMJDPJ_00484	0.0	-	-	-	P	-	-	-	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_00485	5.51e-140	cysC	2.7.1.25	-	F	ko:K00860	ko00230,ko00920,ko01100,ko01120,map00230,map00920,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Catalyzes the synthesis of activated sulfate
APKMJDPJ_00486	1.13e-221	cysD	2.7.7.4	-	H	ko:K00957	ko00230,ko00261,ko00450,ko00920,ko01100,ko01120,ko01130,map00230,map00261,map00450,map00920,map01100,map01120,map01130	ko00000,ko00001,ko00002,ko01000	COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase) FAD synthetase
APKMJDPJ_00487	0.0	cysN	2.7.1.25, 2.7.7.4	-	H	ko:K00955,ko:K00956	ko00230,ko00261,ko00450,ko00920,ko01100,ko01120,ko01130,map00230,map00261,map00450,map00920,map01100,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN NodQ subfamily
APKMJDPJ_00488	2.36e-279	-	-	-	S	-	-	-	COG NOG10884 non supervised orthologous group
APKMJDPJ_00489	5.94e-237	-	-	-	S	-	-	-	COG NOG26583 non supervised orthologous group
APKMJDPJ_00490	1.67e-91	-	-	-	K	-	-	-	AraC-like ligand binding domain
APKMJDPJ_00491	1.33e-249	-	-	-	M	ko:K03286	-	ko00000,ko02000	OmpA family
APKMJDPJ_00492	2.61e-195	-	-	-	S	-	-	-	Exopolysaccharide biosynthesis protein YbjH
APKMJDPJ_00493	0.0	-	-	-	-	-	-	-	-
APKMJDPJ_00494	6.85e-232	-	-	-	-	-	-	-	-
APKMJDPJ_00495	3.27e-273	-	-	-	L	-	-	-	Arm DNA-binding domain
APKMJDPJ_00497	3.64e-307	-	-	-	-	-	-	-	-
APKMJDPJ_00498	6.3e-233	-	-	-	S	-	-	-	Domain of unknown function (DUF3869)
APKMJDPJ_00499	7.79e-186	-	-	-	S	-	-	-	Exopolysaccharide biosynthesis protein YbjH
APKMJDPJ_00500	2.37e-251	-	-	-	M	ko:K03286	-	ko00000,ko02000	OmpA family
APKMJDPJ_00501	7.49e-91	ruvX	-	-	L	ko:K07447	-	ko00000,ko01000	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
APKMJDPJ_00502	2.2e-128	def	3.5.1.88	-	J	ko:K01462	-	ko00000,ko01000	Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
APKMJDPJ_00503	1.91e-301	-	-	-	S	-	-	-	Domain of unknown function (DUF4934)
APKMJDPJ_00504	6.21e-200	-	-	-	S	-	-	-	COG COG0457 FOG TPR repeat
APKMJDPJ_00505	0.0	thrS	6.1.1.3	-	J	ko:K01868	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
APKMJDPJ_00506	2.96e-130	infC	-	-	J	ko:K02520	-	ko00000,ko03012,ko03029	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
APKMJDPJ_00507	7.41e-37	rpmI	-	-	J	ko:K02916	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL35 family
APKMJDPJ_00508	3.06e-75	rplT	-	-	J	ko:K02887	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
APKMJDPJ_00509	2.14e-190	-	-	-	C	-	-	-	4Fe-4S binding domain protein
APKMJDPJ_00510	1.94e-129	xpt	2.4.2.22	-	F	ko:K03816	ko00230,ko01100,ko01110,map00230,map01100,map01110	ko00000,ko00001,ko01000	Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
APKMJDPJ_00511	1.91e-316	paaK	6.2.1.30	-	H	ko:K01912	ko00360,ko01120,ko05111,map00360,map01120,map05111	ko00000,ko00001,ko01000	Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
APKMJDPJ_00512	1.53e-133	iorB	1.2.7.8	-	C	ko:K00180	-	br01601,ko00000,ko01000	COG1014 Pyruvate ferredoxin oxidoreductase and related 2-oxoacid ferredoxin
APKMJDPJ_00513	0.0	iorA	1.2.7.8	-	C	ko:K00179	-	br01601,ko00000,ko01000	Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates
APKMJDPJ_00514	3.83e-257	mltG	-	-	S	ko:K07082	-	ko00000	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
APKMJDPJ_00515	2.02e-214	nucA_1	-	-	F	ko:K01173	ko04210,map04210	ko00000,ko00001,ko03029	Psort location Extracellular, score
APKMJDPJ_00517	0.0	-	-	-	MN	-	-	-	COG NOG13219 non supervised orthologous group
APKMJDPJ_00521	0.0	wbpM	-	-	GM	-	-	-	Polysaccharide biosynthesis protein
APKMJDPJ_00522	0.0	kpsD	-	-	M	-	-	-	COG1596 Periplasmic protein involved in polysaccharide export
APKMJDPJ_00523	6.91e-259	-	-	-	M	-	-	-	Chain length determinant protein
APKMJDPJ_00524	2.23e-124	-	-	-	K	-	-	-	Transcription termination factor nusG
APKMJDPJ_00525	6.41e-111	-	-	-	G	-	-	-	Cupin 2, conserved barrel domain protein
APKMJDPJ_00526	1.74e-291	nagC	2.7.1.2	-	GK	ko:K00845	ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Psort location Cytoplasmic, score
APKMJDPJ_00527	6.62e-231	nanA	4.1.3.3, 4.2.1.41, 4.3.3.7	-	EM	ko:K01639,ko:K01707,ko:K01714	ko00053,ko00261,ko00300,ko00520,ko01100,ko01110,ko01120,ko01130,ko01230,map00053,map00261,map00300,map00520,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the DapA family
APKMJDPJ_00528	9.47e-310	nanE	5.1.3.8	-	G	ko:K01787	ko00520,map00520	ko00000,ko00001,ko01000	COG COG2942 N-acyl-D-glucosamine 2-epimerase
APKMJDPJ_00529	9.47e-301	-	-	-	G	ko:K08191	-	ko00000,ko02000	Transporter, major facilitator family protein
APKMJDPJ_00530	2.55e-105	-	-	-	G	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_00531	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
APKMJDPJ_00532	6.22e-214	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
APKMJDPJ_00533	0.0	-	-	-	S	ko:K21572	-	ko00000,ko02000	SusD family
APKMJDPJ_00535	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
APKMJDPJ_00536	0.0	-	-	-	GM	-	-	-	SusD family
APKMJDPJ_00537	9.99e-317	-	-	-	S	-	-	-	Abhydrolase family
APKMJDPJ_00538	0.0	-	-	-	S	ko:K06921	-	ko00000	ATPase (AAA superfamily)
APKMJDPJ_00540	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
APKMJDPJ_00541	0.0	-	-	-	GM	-	-	-	SusD family
APKMJDPJ_00542	0.0	-	3.2.1.51	GH29	G	ko:K01206	ko00511,map00511	ko00000,ko00001,ko01000,ko04147	Alpha-L-fucosidase
APKMJDPJ_00543	1.33e-312	-	-	-	L	-	-	-	Arm DNA-binding domain
APKMJDPJ_00544	8.87e-66	-	-	-	K	-	-	-	Helix-turn-helix domain
APKMJDPJ_00545	3.67e-93	-	-	-	-	-	-	-	-
APKMJDPJ_00546	3.7e-80	-	-	-	K	-	-	-	HxlR-like helix-turn-helix
APKMJDPJ_00547	1.21e-180	-	-	-	C	-	-	-	4Fe-4S binding domain
APKMJDPJ_00549	2.55e-142	-	-	-	S	-	-	-	Domain of unknown function (DUF4948)
APKMJDPJ_00550	2.26e-120	-	-	-	-	-	-	-	-
APKMJDPJ_00552	5.1e-240	-	-	-	L	-	-	-	DNA primase TraC
APKMJDPJ_00553	5.28e-152	-	-	-	-	-	-	-	-
APKMJDPJ_00554	4.45e-130	-	-	-	S	-	-	-	Protein of unknown function (DUF1273)
APKMJDPJ_00555	0.0	-	-	-	K	ko:K03497	-	ko00000,ko03000,ko03036,ko04812	Belongs to the ParB family
APKMJDPJ_00556	7.03e-151	-	-	-	-	-	-	-	-
APKMJDPJ_00557	3.25e-48	-	-	-	-	-	-	-	-
APKMJDPJ_00559	7.61e-102	-	-	-	L	-	-	-	DNA repair
APKMJDPJ_00560	1.42e-203	-	-	-	-	-	-	-	-
APKMJDPJ_00561	3.58e-162	-	-	-	-	-	-	-	-
APKMJDPJ_00562	1.93e-105	-	-	-	S	-	-	-	conserved protein found in conjugate transposon
APKMJDPJ_00563	2.37e-141	-	-	-	S	-	-	-	COG NOG19079 non supervised orthologous group
APKMJDPJ_00564	6.35e-228	-	-	-	U	-	-	-	Conjugative transposon TraN protein
APKMJDPJ_00565	0.0	traM	-	-	S	-	-	-	Conjugative transposon TraM protein
APKMJDPJ_00566	1.93e-265	-	-	-	-	-	-	-	-
APKMJDPJ_00567	5.45e-61	-	-	-	S	-	-	-	Protein of unknown function (DUF3989)
APKMJDPJ_00568	1.77e-143	-	-	-	U	-	-	-	Conjugative transposon TraK protein
APKMJDPJ_00569	1.82e-229	-	-	-	S	-	-	-	Conjugative transposon TraJ protein
APKMJDPJ_00570	7.5e-146	-	-	-	U	-	-	-	COG NOG09946 non supervised orthologous group
APKMJDPJ_00571	4.8e-83	-	-	-	S	-	-	-	to Bacteroides thetaiotaomicron conserved protein found in conjugate transposon BT0092 SWALL AAO75199 (EMBL AE016926) (118 aa) fasta scores E()
APKMJDPJ_00572	0.0	-	-	-	U	-	-	-	Conjugation system ATPase, TraG family
APKMJDPJ_00573	5.08e-72	-	-	-	S	-	-	-	COG NOG30259 non supervised orthologous group
APKMJDPJ_00574	2.73e-61	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
APKMJDPJ_00575	5.31e-130	-	-	-	S	-	-	-	COG NOG24967 non supervised orthologous group
APKMJDPJ_00576	2.54e-87	-	-	-	S	-	-	-	Protein of unknown function (DUF3408)
APKMJDPJ_00577	1.97e-188	-	-	-	D	-	-	-	ATPase MipZ
APKMJDPJ_00578	2.38e-96	-	-	-	-	-	-	-	-
APKMJDPJ_00579	0.0	-	-	-	U	-	-	-	Relaxase mobilization nuclease domain protein
APKMJDPJ_00580	0.0	-	-	-	U	-	-	-	COG COG3505 Type IV secretory pathway, VirD4 components
APKMJDPJ_00581	6.46e-93	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 9.46
APKMJDPJ_00582	1.39e-113	-	-	-	-	-	-	-	-
APKMJDPJ_00584	1.54e-116	-	-	-	S	-	-	-	SMI1 / KNR4 family (SUKH-1)
APKMJDPJ_00585	3.34e-243	-	-	-	-	-	-	-	-
APKMJDPJ_00586	1.97e-130	-	-	-	-	-	-	-	-
APKMJDPJ_00587	1.34e-109	-	-	-	S	-	-	-	Domain of unknown function (DUF4304)
APKMJDPJ_00588	6.04e-144	-	-	-	S	-	-	-	SMI1 / KNR4 family
APKMJDPJ_00589	1.71e-83	-	-	-	-	-	-	-	-
APKMJDPJ_00590	1.39e-231	-	-	-	S	-	-	-	protein YPO3610 or Y0264 SWALL Q8ZB19 (EMBL AJ414158) (161 aa) fasta scores E()
APKMJDPJ_00591	1.06e-162	-	-	-	-	-	-	-	-
APKMJDPJ_00592	5.27e-110	-	-	-	S	-	-	-	Immunity protein 21
APKMJDPJ_00593	1.91e-168	-	-	-	S	-	-	-	Immunity protein 19
APKMJDPJ_00594	1.18e-222	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_00595	4.54e-241	-	-	-	S	-	-	-	protein YPO3610 or Y0264 SWALL Q8ZB19 (EMBL AJ414158) (161 aa) fasta scores E()
APKMJDPJ_00596	6.24e-78	-	-	-	-	-	-	-	-
APKMJDPJ_00597	1.75e-206	-	-	-	-	-	-	-	-
APKMJDPJ_00598	6.84e-103	-	-	-	S	-	-	-	SMI1 / KNR4 family
APKMJDPJ_00599	5.2e-224	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_00600	1.66e-269	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
APKMJDPJ_00601	0.0	-	-	-	S	-	-	-	COG NOG09947 non supervised orthologous group
APKMJDPJ_00602	0.0	-	5.99.1.2	-	L	ko:K03169	-	ko00000,ko01000,ko03032	COG0550 Topoisomerase IA
APKMJDPJ_00603	2.59e-112	-	-	-	-	-	-	-	-
APKMJDPJ_00604	3.68e-257	-	-	-	S	-	-	-	RNase LS, bacterial toxin
APKMJDPJ_00605	2.7e-86	-	-	-	S	-	-	-	Antitoxin to bacterial toxin RNase LS or RnlA
APKMJDPJ_00606	3.37e-115	-	-	-	S	-	-	-	RibD C-terminal domain
APKMJDPJ_00607	6.59e-76	-	-	-	S	-	-	-	Helix-turn-helix domain
APKMJDPJ_00608	0.0	-	-	-	L	-	-	-	non supervised orthologous group
APKMJDPJ_00609	2.62e-93	-	-	-	S	-	-	-	Helix-turn-helix domain
APKMJDPJ_00610	2.94e-200	-	-	-	S	-	-	-	RteC protein
APKMJDPJ_00611	7.27e-207	-	-	-	K	-	-	-	Transcriptional regulator
APKMJDPJ_00612	3.45e-126	-	-	-	-	-	-	-	-
APKMJDPJ_00613	3.25e-58	-	-	-	S	-	-	-	Immunity protein 17
APKMJDPJ_00614	2.42e-190	-	-	-	S	-	-	-	WG containing repeat
APKMJDPJ_00615	9.19e-141	-	-	-	-	-	-	-	-
APKMJDPJ_00616	8.87e-50	-	-	-	G	-	-	-	Alpha-L-fucosidase
APKMJDPJ_00619	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
APKMJDPJ_00620	0.0	-	-	-	M	ko:K21572	-	ko00000,ko02000	Pfam:SusD
APKMJDPJ_00621	0.0	-	-	-	K	ko:K21572	-	ko00000,ko02000	Pfam:SusD
APKMJDPJ_00622	0.0	-	-	-	P	-	-	-	Carboxypeptidase regulatory-like domain
APKMJDPJ_00623	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
APKMJDPJ_00625	4.12e-141	-	-	-	S	ko:K21572	-	ko00000,ko02000	SusD family
APKMJDPJ_00627	0.0	nanH	3.2.1.18	GH33	G	ko:K01186	ko00511,ko00600,ko04142,map00511,map00600,map04142	ko00000,ko00001,ko01000,ko02042	BNR Asp-box repeat protein
APKMJDPJ_00628	0.0	-	-	-	G	-	-	-	Glycosyl hydrolase family 20, catalytic domain
APKMJDPJ_00629	9.08e-157	estA	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase family
APKMJDPJ_00630	0.0	estS	3.1.1.53	-	E	ko:K05970	-	ko00000,ko01000	Carbohydrate esterase, sialic acid-specific acetylesterase
APKMJDPJ_00631	0.0	-	3.2.1.25	-	G	ko:K01192	ko00511,ko04142,map00511,map04142	ko00000,ko00001,ko01000	Glycosyl hydrolase family 2, sugar binding domain protein
APKMJDPJ_00632	0.0	-	3.2.1.52	GH20	G	ko:K12373	ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142	ko00000,ko00001,ko00002,ko01000,ko03110	Glycosyl hydrolase family 20, catalytic domain protein
APKMJDPJ_00633	1.57e-300	-	-	-	S	-	-	-	Cyclically-permuted mutarotase family protein
APKMJDPJ_00634	0.0	nagZ3	3.2.1.52	GH20	G	ko:K12373	ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142	ko00000,ko00001,ko00002,ko01000,ko03110	Glycosyl hydrolase family 20, catalytic domain
APKMJDPJ_00635	0.0	-	-	-	G	-	-	-	Alpha-1,2-mannosidase
APKMJDPJ_00636	0.0	-	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 2 family
APKMJDPJ_00637	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
APKMJDPJ_00638	0.0	-	-	-	P	ko:K21572	-	ko00000,ko02000	SusD family
APKMJDPJ_00639	8.76e-249	dnaJ	-	-	O	ko:K03686	-	ko00000,ko03029,ko03110	ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
APKMJDPJ_00640	3.44e-126	grpE	-	-	O	ko:K03687	-	ko00000,ko03029,ko03110	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
APKMJDPJ_00641	0.0	-	-	-	S	-	-	-	COG COG0488 ATPase components of ABC transporters with duplicated ATPase domains
APKMJDPJ_00642	1.13e-127	-	-	-	K	ko:K03088	-	ko00000,ko03021	Sigma-70, region 4
APKMJDPJ_00643	8.7e-91	-	-	-	-	-	-	-	-
APKMJDPJ_00644	6.99e-270	-	-	-	-	-	-	-	-
APKMJDPJ_00645	2.49e-234	-	-	-	S	-	-	-	COG NOG26673 non supervised orthologous group
APKMJDPJ_00646	2.81e-195	-	-	-	S	ko:K07052	-	ko00000	CAAX amino terminal protease family
APKMJDPJ_00647	2.71e-281	-	-	-	-	-	-	-	-
APKMJDPJ_00648	0.0	-	-	-	P	-	-	-	CarboxypepD_reg-like domain
APKMJDPJ_00649	1.4e-147	-	-	-	M	-	-	-	Protein of unknown function (DUF3575)
APKMJDPJ_00653	1.59e-307	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
APKMJDPJ_00654	1.71e-83	-	-	-	S	-	-	-	COG3943, virulence protein
APKMJDPJ_00656	6.86e-26	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
APKMJDPJ_00657	0.0	hsdR	3.1.21.3	-	V	ko:K01153	-	ko00000,ko01000,ko02048	Subunit R is required for both nuclease and ATPase activities, but not for modification
APKMJDPJ_00658	0.0	-	-	-	S	-	-	-	Protein of unknown function DUF262
APKMJDPJ_00659	0.0	hsdM	2.1.1.72	-	V	ko:K03427	-	ko00000,ko01000,ko02048	COG0286 Type I restriction-modification system methyltransferase subunit
APKMJDPJ_00660	4.46e-266	-	3.1.21.3	-	V	ko:K01154	-	ko00000,ko01000,ko02048	Type I restriction modification DNA specificity domain
APKMJDPJ_00661	2.33e-138	-	3.1.21.3	-	V	ko:K01154	-	ko00000,ko01000,ko02048	K01154 type I restriction enzyme, S subunit
APKMJDPJ_00662	2.26e-148	-	3.1.21.3	-	L	ko:K01154	-	ko00000,ko01000,ko02048	type I restriction enzyme
APKMJDPJ_00663	1.09e-220	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
APKMJDPJ_00665	1.05e-293	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
APKMJDPJ_00666	1.2e-141	-	-	-	M	-	-	-	non supervised orthologous group
APKMJDPJ_00667	3.89e-265	-	-	-	M	-	-	-	COG NOG23378 non supervised orthologous group
APKMJDPJ_00668	1.81e-274	-	-	-	S	-	-	-	Clostripain family
APKMJDPJ_00672	8.49e-271	-	-	-	-	-	-	-	-
APKMJDPJ_00681	0.0	-	-	-	-	-	-	-	-
APKMJDPJ_00684	0.0	-	-	-	-	-	-	-	-
APKMJDPJ_00686	8.96e-277	-	-	-	M	-	-	-	chlorophyll binding
APKMJDPJ_00687	0.0	-	-	-	-	-	-	-	-
APKMJDPJ_00688	5.78e-85	-	-	-	-	-	-	-	-
APKMJDPJ_00689	7.01e-244	-	-	-	CO	-	-	-	COG NOG24939 non supervised orthologous group
APKMJDPJ_00690	0.0	yhgF	-	-	K	ko:K06959	-	ko00000	Tex-like protein N-terminal domain
APKMJDPJ_00691	0.0	-	-	-	T	-	-	-	ATPase histidine kinase DNA gyrase B HSP90 domain protein
APKMJDPJ_00692	0.0	cpdB	3.1.3.6, 3.1.4.16	-	F	ko:K01119	ko00230,ko00240,map00230,map00240	ko00000,ko00001,ko01000	Belongs to the 5'-nucleotidase family
APKMJDPJ_00693	5.66e-111	msrC	1.8.4.14	-	T	ko:K08968	ko00270,map00270	ko00000,ko00001,ko01000	Psort location Cytoplasmic, score 8.96
APKMJDPJ_00694	1.54e-73	-	-	-	-	-	-	-	-
APKMJDPJ_00695	0.0	-	-	-	P	ko:K16089	-	ko00000,ko02000	COG4771 Outer membrane receptor for ferrienterochelin and colicins
APKMJDPJ_00696	7.79e-188	crnA	3.5.2.10	-	S	ko:K01470	ko00330,map00330	ko00000,ko00001,ko01000	Creatinine amidohydrolase
APKMJDPJ_00697	1.42e-133	-	-	-	T	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_00700	6.24e-304	mepA_6	-	-	V	-	-	-	MATE efflux family protein
APKMJDPJ_00701	9.97e-112	-	-	-	-	-	-	-	-
APKMJDPJ_00702	5.05e-313	-	-	-	V	-	-	-	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_00703	0.0	-	-	-	P	ko:K07085	-	ko00000	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_00704	0.0	fbp	3.1.3.11	-	G	ko:K04041	ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 3
APKMJDPJ_00705	6.29e-148	-	-	-	S	-	-	-	COG NOG22668 non supervised orthologous group
APKMJDPJ_00706	2.34e-269	fcl	1.1.1.271	-	GM	ko:K02377	ko00051,ko00520,ko01100,map00051,map00520,map01100	ko00000,ko00001,ko01000	Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction
APKMJDPJ_00707	5.73e-265	gmd	4.2.1.47	-	M	ko:K01711	ko00051,ko00520,ko01100,map00051,map00520,map01100	ko00000,ko00001,ko01000	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
APKMJDPJ_00708	1.28e-315	-	-	-	S	ko:K07133	-	ko00000	AAA domain
APKMJDPJ_00709	1.06e-192	-	-	-	L	-	-	-	COG NOG19076 non supervised orthologous group
APKMJDPJ_00710	4.35e-79	-	-	-	S	-	-	-	WYL_2, Sm-like SH3 beta-barrel fold
APKMJDPJ_00712	3.43e-118	-	-	-	K	-	-	-	Transcription termination factor nusG
APKMJDPJ_00713	9.69e-114	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_00714	3.57e-299	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_00715	1.08e-167	-	-	-	M	-	-	-	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
APKMJDPJ_00716	0.0	aepX	2.7.7.15, 2.7.7.39, 5.4.2.9	-	GIM	ko:K00968,ko:K00980,ko:K01841	ko00440,ko00564,ko01100,ko01120,ko01130,ko05231,map00440,map00564,map01100,map01120,map01130,map05231	ko00000,ko00001,ko00002,ko01000	Phosphoenolpyruvate phosphomutase
APKMJDPJ_00717	5.89e-280	aepY	4.1.1.82	-	C	ko:K09459	ko00440,ko01100,ko01120,ko01130,map00440,map01100,map01120,map01130	ko00000,ko00001,ko01000	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
APKMJDPJ_00718	6.79e-273	phnW	2.6.1.37	-	E	ko:K03430,ko:K09469	ko00440,ko01100,ko01120,map00440,map01100,map01120	ko00000,ko00001,ko01000,ko01007	Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. PhnW subfamily
APKMJDPJ_00719	0.0	-	-	-	S	-	-	-	polysaccharide biosynthetic process
APKMJDPJ_00720	5.03e-278	-	-	-	-	-	-	-	-
APKMJDPJ_00721	2.65e-213	-	-	-	F	-	-	-	Glycosyl transferase family 11
APKMJDPJ_00722	1.84e-262	wcfX	5.1.3.6	-	M	ko:K08679	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	NAD dependent epimerase dehydratase family
APKMJDPJ_00723	0.0	-	1.1.1.22	-	C	ko:K00012	ko00040,ko00053,ko00520,ko01100,map00040,map00053,map00520,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
APKMJDPJ_00724	2.97e-232	-	-	-	M	-	-	-	Glycosyl transferase family 2
APKMJDPJ_00725	6.32e-253	-	-	-	M	-	-	-	Glycosyltransferase like family 2
APKMJDPJ_00726	8.65e-240	-	-	-	-	-	-	-	-
APKMJDPJ_00727	7.59e-263	-	-	-	M	-	-	-	Glycosyl transferases group 1
APKMJDPJ_00728	7.32e-247	-	5.1.3.2	-	M	ko:K17716	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000	Polysaccharide biosynthesis protein
APKMJDPJ_00729	9.95e-270	fnlC	5.1.3.14	-	G	ko:K01791	ko00520,ko01100,ko05111,map00520,map01100,map05111	ko00000,ko00001,ko00002,ko01000,ko01005	UDP-N-acetylglucosamine 2-epimerase
APKMJDPJ_00730	2.65e-212	-	1.1.1.133	-	C	ko:K00067	ko00521,ko00523,ko01130,map00521,map00523,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
APKMJDPJ_00731	9.7e-294	-	-	-	M	-	-	-	Glycosyltransferase, group 1 family protein
APKMJDPJ_00732	1.22e-248	-	-	-	GM	-	-	-	NAD dependent epimerase dehydratase family
APKMJDPJ_00733	1.8e-220	wcgX	2.7.8.33, 2.7.8.35	-	M	ko:K02851	-	ko00000,ko01000,ko01003,ko01005	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_00734	1.05e-11	-	2.7.11.1	-	S	ko:K07154	-	ko00000,ko01000,ko01001,ko02048	Psort location Cytoplasmic, score 8.96
APKMJDPJ_00735	2.49e-105	-	-	-	L	-	-	-	DNA-binding protein
APKMJDPJ_00736	2.91e-09	-	-	-	-	-	-	-	-
APKMJDPJ_00737	2.81e-260	sstT	-	-	U	-	-	-	Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
APKMJDPJ_00738	0.0	gnd	1.1.1.343, 1.1.1.44	-	H	ko:K00033	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
APKMJDPJ_00739	0.0	zwf	1.1.1.363, 1.1.1.49	-	G	ko:K00036	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,ko05230,map00030,map00480,map01100,map01110,map01120,map01130,map01200,map05230	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
APKMJDPJ_00740	1.83e-174	pgl	3.1.1.31	-	G	ko:K01057	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	COG0363 6-phosphogluconolactonase Glucosamine-6-phosphate isomerase deaminase
APKMJDPJ_00741	8.33e-46	-	-	-	-	-	-	-	-
APKMJDPJ_00742	1.73e-64	-	-	-	-	-	-	-	-
APKMJDPJ_00744	0.0	-	-	-	Q	-	-	-	depolymerase
APKMJDPJ_00745	8.05e-196	-	-	-	E	ko:K08717	-	ko00000,ko02000	urea transporter
APKMJDPJ_00747	2.8e-315	-	-	-	S	-	-	-	amine dehydrogenase activity
APKMJDPJ_00748	5.08e-178	-	-	-	-	-	-	-	-
APKMJDPJ_00749	1.67e-312	umuC	-	-	L	ko:K03502	-	ko00000,ko03400	COGs COG0389 Nucleotidyltransferase DNA polymerase involved in DNA repair
APKMJDPJ_00750	8.94e-100	umuD	-	-	L	ko:K03503	-	ko00000,ko01000,ko01002,ko03400	PFAM Peptidase S24 S26A S26B, conserved region
APKMJDPJ_00751	4.66e-279	-	-	-	-	-	-	-	-
APKMJDPJ_00752	1.82e-162	-	-	-	K	-	-	-	COG3279 Response regulator of the LytR AlgR family
APKMJDPJ_00753	3.82e-255	cheA	-	-	T	-	-	-	two-component sensor histidine kinase
APKMJDPJ_00754	1.11e-280	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	Efflux ABC transporter, permease protein
APKMJDPJ_00755	1.13e-168	-	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
APKMJDPJ_00756	4.55e-240	-	-	-	M	ko:K02005	-	ko00000	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
APKMJDPJ_00757	0.0	-	-	-	MU	ko:K12340	ko01501,ko01503,ko02020,ko03070,ko04626,ko05133,map01501,map01503,map02020,map03070,map04626,map05133	ko00000,ko00001,ko00002,ko01504,ko02000,ko02044	type I secretion outer membrane protein, TolC family
APKMJDPJ_00758	1.78e-42	-	-	-	S	-	-	-	COG NOG17489 non supervised orthologous group
APKMJDPJ_00759	0.0	cydA	1.10.3.14	-	C	ko:K00425	ko00190,ko01100,ko02020,map00190,map01100,map02020	ko00000,ko00001,ko00002,ko01000	COG1271 Cytochrome bd-type quinol oxidase, subunit 1
APKMJDPJ_00760	2.48e-274	cydB	1.10.3.14	-	C	ko:K00426	ko00190,ko01100,ko02020,map00190,map01100,map02020	ko00000,ko00001,ko00002,ko01000	COG1294 Cytochrome bd-type quinol oxidase subunit 2
APKMJDPJ_00761	1.05e-254	-	-	-	S	-	-	-	WGR domain protein
APKMJDPJ_00762	2.1e-245	-	-	-	HJ	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_00763	1.04e-216	-	-	-	P	-	-	-	Type I phosphodiesterase / nucleotide pyrophosphatase
APKMJDPJ_00764	9.34e-305	-	-	-	H	-	-	-	Coproporphyrinogen III oxidase and related Fe-S oxidoreductases
APKMJDPJ_00765	0.0	-	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
APKMJDPJ_00766	2.32e-233	hprA	1.1.1.29	-	C	ko:K00018	ko00260,ko00630,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,map00260,map00630,map00680,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
APKMJDPJ_00767	8.52e-305	rarA	-	-	L	ko:K07478	-	ko00000	COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase
APKMJDPJ_00768	0.0	-	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	Glycosyl hydrolases family 2, sugar binding domain
APKMJDPJ_00769	0.0	-	-	-	M	-	-	-	COG NOG06397 non supervised orthologous group
APKMJDPJ_00770	4.46e-262	wecB	5.1.3.14	-	M	ko:K01791	ko00520,ko01100,ko05111,map00520,map01100,map05111	ko00000,ko00001,ko00002,ko01000,ko01005	Belongs to the UDP-N-acetylglucosamine 2-epimerase family
APKMJDPJ_00771	1.03e-147	yadS	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_00772	5.57e-110	-	-	-	S	-	-	-	COG NOG30135 non supervised orthologous group
APKMJDPJ_00773	2.11e-222	htpX	-	-	O	ko:K03799	-	ko00000,ko00002,ko01000,ko01002	Peptidase family M48
APKMJDPJ_00774	1.53e-120	lemA	-	-	S	ko:K03744	-	ko00000	LemA family
APKMJDPJ_00775	1.66e-117	-	-	-	K	ko:K03088	-	ko00000,ko03021	Belongs to the sigma-70 factor family. ECF subfamily
APKMJDPJ_00776	0.0	-	6.4.1.1	-	C	ko:K01960	ko00020,ko00620,ko00720,ko01100,ko01120,ko01200,ko01230,map00020,map00620,map00720,map01100,map01120,map01200,map01230	ko00000,ko00001,ko00002,ko01000	COG5016 Pyruvate oxaloacetate carboxyltransferase
APKMJDPJ_00777	0.0	-	-	-	P	ko:K02014	-	ko00000,ko02000	TonB-linked outer membrane protein, SusC RagA family
APKMJDPJ_00778	0.0	-	-	-	S	-	-	-	Susd and RagB outer membrane lipoprotein
APKMJDPJ_00779	6.31e-171	mtgA	2.4.1.129	GT51	M	ko:K03814	ko00550,map00550	ko00000,ko00001,ko01000,ko01003,ko01011	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
APKMJDPJ_00780	6.58e-120	-	-	-	M	-	-	-	COG2885 Outer membrane protein and related peptidoglycan-associated
APKMJDPJ_00781	0.0	-	-	-	V	-	-	-	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_00782	2.31e-203	-	-	-	EG	-	-	-	EamA-like transporter family
APKMJDPJ_00783	3.32e-207	-	-	-	S	-	-	-	CarboxypepD_reg-like domain
APKMJDPJ_00784	7.17e-46	-	-	-	S	-	-	-	CarboxypepD_reg-like domain
APKMJDPJ_00785	1.34e-198	-	-	-	PT	-	-	-	Sigma factor regulatory protein, FecR PupR family
APKMJDPJ_00786	2.67e-124	-	-	-	K	ko:K03088	-	ko00000,ko03021	RNA polymerase sigma-70 factor
APKMJDPJ_00787	2.86e-306	-	-	-	S	-	-	-	CarboxypepD_reg-like domain
APKMJDPJ_00788	5.25e-134	-	-	-	-	-	-	-	-
APKMJDPJ_00789	1.37e-55	-	-	-	L	ko:K03530	-	ko00000,ko03032,ko03036,ko03400	bacterial (prokaryotic) histone like domain
APKMJDPJ_00790	1.98e-47	-	-	-	M	-	-	-	Psort location OuterMembrane, score
APKMJDPJ_00791	5.23e-50	-	-	-	M	-	-	-	Psort location OuterMembrane, score
APKMJDPJ_00792	1.16e-127	-	-	-	K	ko:K03088	-	ko00000,ko03021	Sigma-70, region 4
APKMJDPJ_00793	1.26e-210	-	-	-	PT	-	-	-	FecR protein
APKMJDPJ_00795	5.08e-216	-	-	-	K	ko:K20968	ko02025,map02025	ko00000,ko00001,ko03000	Transcriptional regulator
APKMJDPJ_00796	8.61e-148	-	-	-	M	-	-	-	non supervised orthologous group
APKMJDPJ_00797	3.59e-281	-	-	-	M	-	-	-	chlorophyll binding
APKMJDPJ_00798	4.82e-237	-	-	-	-	-	-	-	-
APKMJDPJ_00799	5.69e-234	-	-	-	S	-	-	-	protein BT1062 SWALL AAO76169 (EMBL AE016930) (317 aa) fasta scores E()
APKMJDPJ_00800	0.0	-	-	-	-	-	-	-	-
APKMJDPJ_00801	0.0	-	-	-	-	-	-	-	-
APKMJDPJ_00802	0.0	-	-	-	M	-	-	-	peptidase S41
APKMJDPJ_00803	8.03e-83	-	-	-	S	-	-	-	Protein of unknown function (DUF3795)
APKMJDPJ_00804	2e-240	-	-	-	K	ko:K03828	-	ko00000,ko01000	Acetyltransferase (GNAT) domain
APKMJDPJ_00805	0.0	hemG	1.3.3.15, 1.3.3.4	-	H	ko:K00231	ko00860,ko01100,ko01110,map00860,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
APKMJDPJ_00806	0.0	hemN	-	-	H	-	-	-	Belongs to the anaerobic coproporphyrinogen-III oxidase family
APKMJDPJ_00807	3.33e-285	-	-	-	EGP	-	-	-	Major Facilitator Superfamily
APKMJDPJ_00808	4.95e-272	-	-	-	P	-	-	-	Outer membrane receptor
APKMJDPJ_00810	0.0	-	-	-	Q	-	-	-	calcium- and calmodulin-responsive adenylate cyclase activity
APKMJDPJ_00811	2.47e-294	-	-	-	M	ko:K03286	-	ko00000,ko02000	Belongs to the ompA family
APKMJDPJ_00812	1.36e-210	-	-	-	K	ko:K20968	ko02025,map02025	ko00000,ko00001,ko03000	Transcriptional regulator, AraC family
APKMJDPJ_00813	0.0	fecA	-	-	P	ko:K16091	-	ko00000,ko02000	TonB dependent receptor
APKMJDPJ_00814	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
APKMJDPJ_00815	0.0	-	-	-	S	ko:K21572	-	ko00000,ko02000	Starch-binding associating with outer membrane
APKMJDPJ_00816	7.83e-240	-	-	-	S	-	-	-	Putative zinc-binding metallo-peptidase
APKMJDPJ_00817	1.33e-256	-	-	-	S	-	-	-	Domain of unknown function (DUF4302)
APKMJDPJ_00818	4.9e-157	-	-	-	-	-	-	-	-
APKMJDPJ_00819	3.91e-289	-	-	-	S	-	-	-	Domain of unknown function (DUF4856)
APKMJDPJ_00820	1.8e-273	-	-	-	S	-	-	-	Carbohydrate binding domain
APKMJDPJ_00821	4.1e-221	-	-	-	-	-	-	-	-
APKMJDPJ_00822	0.0	kpsD	-	-	M	-	-	-	COG1596 Periplasmic protein involved in polysaccharide export
APKMJDPJ_00824	0.0	-	-	-	S	-	-	-	oxidoreductase activity
APKMJDPJ_00825	1.8e-215	-	-	-	S	-	-	-	Pkd domain
APKMJDPJ_00826	1.99e-122	-	-	-	S	-	-	-	Family of unknown function (DUF5469)
APKMJDPJ_00827	4.72e-108	-	-	-	S	-	-	-	Family of unknown function (DUF5469)
APKMJDPJ_00828	7.44e-230	-	-	-	S	-	-	-	Pfam:T6SS_VasB
APKMJDPJ_00829	1.51e-283	-	-	-	S	-	-	-	type VI secretion protein
APKMJDPJ_00830	8.81e-204	-	-	-	S	-	-	-	Family of unknown function (DUF5467)
APKMJDPJ_00832	1.22e-222	-	-	-	-	-	-	-	-
APKMJDPJ_00833	3.22e-246	-	-	-	-	-	-	-	-
APKMJDPJ_00834	0.0	-	-	-	-	-	-	-	-
APKMJDPJ_00835	1.74e-146	-	-	-	S	-	-	-	PAAR motif
APKMJDPJ_00836	0.0	-	-	-	S	-	-	-	Rhs element Vgr protein
APKMJDPJ_00837	0.0	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_00838	1.48e-103	-	-	-	S	-	-	-	Gene 25-like lysozyme
APKMJDPJ_00844	2.26e-95	-	-	-	-	-	-	-	-
APKMJDPJ_00845	6.34e-103	-	-	-	-	-	-	-	-
APKMJDPJ_00846	0.0	-	-	-	O	-	-	-	Psort location Cytoplasmic, score 9.97
APKMJDPJ_00847	1.81e-315	-	-	-	S	-	-	-	Family of unknown function (DUF5458)
APKMJDPJ_00848	1.41e-98	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_00849	1.1e-90	-	-	-	-	-	-	-	-
APKMJDPJ_00850	6.86e-172	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
APKMJDPJ_00851	1.87e-308	-	2.3.1.29, 2.3.1.47	-	E	ko:K00639,ko:K00652	ko00260,ko00780,ko01100,map00260,map00780,map01100	ko00000,ko00001,ko00002,ko01000,ko01007	Beta-eliminating lyase
APKMJDPJ_00852	0.0	-	-	-	L	-	-	-	AAA domain
APKMJDPJ_00853	1.61e-36	-	5.3.2.6	-	S	ko:K01821	ko00362,ko00621,ko00622,ko01100,ko01120,ko01220,map00362,map00621,map00622,map01100,map01120,map01220	ko00000,ko00001,ko00002,ko01000	Tautomerase enzyme
APKMJDPJ_00855	8.3e-146	-	-	-	K	-	-	-	PFAM Bacterial regulatory proteins, tetR family
APKMJDPJ_00856	2.15e-167	-	-	-	L	ko:K04763	-	ko00000,ko03036	Belongs to the 'phage' integrase family
APKMJDPJ_00857	1.06e-91	-	-	-	-	-	-	-	-
APKMJDPJ_00858	8.5e-207	-	-	-	-	-	-	-	-
APKMJDPJ_00860	1.69e-102	-	-	-	-	-	-	-	-
APKMJDPJ_00861	4.45e-99	-	-	-	-	-	-	-	-
APKMJDPJ_00862	6.1e-100	-	-	-	-	-	-	-	-
APKMJDPJ_00863	1.58e-196	-	-	-	S	-	-	-	Protein of unknown function (DUF1266)
APKMJDPJ_00866	0.0	-	-	-	S	ko:K15738	-	ko00000,ko02000	ATP-binding cassette protein, ChvD family
APKMJDPJ_00867	0.0	-	-	-	P	-	-	-	TonB-dependent receptor
APKMJDPJ_00868	0.0	-	-	-	S	-	-	-	Domain of unknown function (DUF5017)
APKMJDPJ_00869	3.33e-266	-	-	-	S	-	-	-	Endonuclease Exonuclease phosphatase family protein
APKMJDPJ_00870	0.0	-	-	-	T	-	-	-	Psort location CytoplasmicMembrane, score 7.88
APKMJDPJ_00871	1.29e-238	-	-	-	M	-	-	-	Psort location CytoplasmicMembrane, score
APKMJDPJ_00872	0.0	-	-	-	S	-	-	-	Putative polysaccharide deacetylase
APKMJDPJ_00873	5.55e-290	-	-	-	I	-	-	-	Acyltransferase family
APKMJDPJ_00874	1.79e-208	-	-	-	M	-	-	-	Glycosyltransferase, group 2 family protein
APKMJDPJ_00875	2.17e-289	-	-	-	M	-	-	-	Glycosyltransferase, group 1 family protein
APKMJDPJ_00876	7.44e-259	-	-	-	M	-	-	-	transferase activity, transferring glycosyl groups
APKMJDPJ_00877	1.98e-284	-	-	-	M	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_00878	0.0	-	-	-	S	ko:K03328	-	ko00000	COG2244 Membrane protein involved in the export of O-antigen and teichoic acid
APKMJDPJ_00879	1.76e-232	-	-	-	M	-	-	-	Glycosyltransferase like family 2
APKMJDPJ_00881	8.28e-292	-	-	-	M	-	-	-	Psort location CytoplasmicMembrane, score
APKMJDPJ_00882	1.38e-223	-	-	-	S	ko:K07011	-	ko00000	Glycosyltransferase, group 2 family protein
APKMJDPJ_00883	0.0	-	-	-	M	-	-	-	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_00884	0.0	-	-	-	M	-	-	-	COG NOG36677 non supervised orthologous group
APKMJDPJ_00885	2.19e-167	-	-	-	MU	-	-	-	COG NOG27134 non supervised orthologous group
APKMJDPJ_00886	2.23e-306	-	-	-	M	-	-	-	COG NOG26016 non supervised orthologous group
APKMJDPJ_00887	0.0	pepC	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	Peptidase C1-like family
APKMJDPJ_00888	0.0	nqrA	1.6.5.8	-	C	ko:K00346	-	ko00000,ko01000	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
APKMJDPJ_00889	1.92e-283	nqrB	1.6.5.8	-	C	ko:K00347	-	ko00000,ko01000	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
APKMJDPJ_00890	6.61e-157	nqrC	1.6.5.8	-	C	ko:K00348	-	ko00000,ko01000	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
APKMJDPJ_00891	7.15e-140	nqrD	1.6.5.8	-	C	ko:K00349	-	ko00000,ko01000	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
APKMJDPJ_00892	8.43e-122	nqrE	1.6.5.8	-	C	ko:K00350	-	ko00000,ko01000	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
APKMJDPJ_00893	4.79e-311	nqrF	1.6.5.8	-	C	ko:K00351	-	ko00000,ko01000	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. The first step is catalyzed by NqrF, which accepts electrons from NADH and reduces ubiquinone-1 to ubisemiquinone by a one-electron transfer pathway
APKMJDPJ_00894	0.0	dbpA	3.6.4.13	-	L	ko:K05591	-	ko00000,ko01000,ko03009	ATP-independent RNA helicase DbpA
APKMJDPJ_00895	9.1e-261	serC	2.6.1.52	-	E	ko:K00831	ko00260,ko00680,ko00750,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map00750,map01100,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
APKMJDPJ_00896	2.18e-216	serA	1.1.1.399, 1.1.1.95	-	C	ko:K00058	ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
APKMJDPJ_00897	8.56e-310	-	-	-	S	-	-	-	Conserved protein
APKMJDPJ_00898	5.08e-95	mip	5.2.1.8	-	O	ko:K01802	-	ko00000,ko01000	COG COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1
APKMJDPJ_00899	1.34e-137	yigZ	-	-	S	-	-	-	YigZ family
APKMJDPJ_00900	6.33e-226	hpaIIR	3.1.21.4	-	L	ko:K01155	-	ko00000,ko01000,ko02048	COG NOG26934 non supervised orthologous group
APKMJDPJ_00901	5.83e-140	-	-	-	C	-	-	-	Nitroreductase family
APKMJDPJ_00902	0.0	gcvP	1.4.4.2	-	E	ko:K00281,ko:K00283	ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200	ko00000,ko00001,ko00002,ko01000	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
APKMJDPJ_00903	1.03e-158	-	-	-	P	-	-	-	Psort location Cytoplasmic, score
APKMJDPJ_00904	8.7e-146	rsmG	2.1.1.170	-	J	ko:K03501	-	ko00000,ko01000,ko03009,ko03036	Specifically methylates the N7 position of a guanine in 16S rRNA
APKMJDPJ_00905	7.02e-211	-	-	-	S	-	-	-	Protein of unknown function (DUF3298)
APKMJDPJ_00906	3.08e-90	-	-	-	-	-	-	-	-
APKMJDPJ_00907	0.0	-	-	-	P	-	-	-	COG COG4771 Outer membrane receptor for ferrienterochelin and colicins
APKMJDPJ_00908	3.66e-61	-	-	-	P	ko:K08364	-	ko00000,ko02000	Heavy metal-associated domain protein
APKMJDPJ_00909	2.83e-207	copA	3.6.3.4, 3.6.3.54	-	P	ko:K01533,ko:K17686	ko01524,ko04016,map01524,map04016	ko00000,ko00001,ko01000	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_00910	1.93e-284	copA	3.6.3.4, 3.6.3.54	-	P	ko:K01533,ko:K17686	ko01524,ko04016,map01524,map04016	ko00000,ko00001,ko01000	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_00911	7.19e-197	-	-	-	K	-	-	-	transcriptional regulator (AraC family)
APKMJDPJ_00912	1.35e-163	lipB	2.3.1.181	-	H	ko:K03801	ko00785,ko01100,map00785,map01100	ko00000,ko00001,ko01000	Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate
APKMJDPJ_00914	3.63e-127	-	-	-	I	-	-	-	Protein of unknown function (DUF1460)
APKMJDPJ_00915	7.22e-150	-	-	-	I	-	-	-	pectin acetylesterase
APKMJDPJ_00916	0.0	-	-	-	S	-	-	-	oligopeptide transporter, OPT family
APKMJDPJ_00917	4.44e-91	-	-	-	M	-	-	-	Protein of unknown function (DUF1573)
APKMJDPJ_00918	6.12e-313	-	-	-	T	-	-	-	His Kinase A (phosphoacceptor) domain
APKMJDPJ_00919	0.0	-	-	-	T	-	-	-	Sigma-54 interaction domain
APKMJDPJ_00920	0.0	-	-	-	S	-	-	-	Domain of unknown function (DUF4933)
APKMJDPJ_00921	0.0	-	-	-	S	-	-	-	Domain of unknown function (DUF4933)
APKMJDPJ_00922	0.0	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter, permease protein
APKMJDPJ_00923	5.87e-155	-	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
APKMJDPJ_00924	3.57e-130	-	-	-	S	-	-	-	COG NOG28221 non supervised orthologous group
APKMJDPJ_00925	1.07e-141	engB	-	-	D	ko:K03978	-	ko00000,ko03036	Necessary for normal cell division and for the maintenance of normal septation
APKMJDPJ_00926	0.0	-	-	-	E	-	-	-	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
APKMJDPJ_00927	2.15e-115	-	-	-	S	-	-	-	Isoprenylcysteine carboxyl methyltransferase (ICMT) family
APKMJDPJ_00928	5.74e-94	-	-	-	-	-	-	-	-
APKMJDPJ_00929	1.77e-142	recR	-	-	L	ko:K06187	ko03440,map03440	ko00000,ko00001,ko03400	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
APKMJDPJ_00930	1.93e-96	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
APKMJDPJ_00931	1.24e-129	speG	2.3.1.57	-	J	ko:K00657	ko00330,ko01100,ko04216,map00330,map01100,map04216	ko00000,ko00001,ko00002,ko01000	Acetyltransferase, gnat family
APKMJDPJ_00932	9.26e-145	-	-	-	K	ko:K07735	-	ko00000,ko03000	Belongs to the UPF0301 (AlgH) family
APKMJDPJ_00933	0.0	alaC	-	-	E	-	-	-	Aminotransferase, class I II
APKMJDPJ_00935	4.1e-297	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
APKMJDPJ_00936	5.7e-200	-	2.7.7.49	-	L	ko:K00986	-	ko00000,ko01000	Reverse transcriptase (RNA-dependent DNA polymerase)
APKMJDPJ_00938	1.21e-63	-	-	-	S	-	-	-	MerR HTH family regulatory protein
APKMJDPJ_00939	2.23e-65	-	-	-	S	-	-	-	Domain of unknown function, B. Theta Gene description (DUF3876)
APKMJDPJ_00940	1.5e-68	-	-	-	K	-	-	-	Helix-turn-helix domain
APKMJDPJ_00941	1.97e-59	-	-	-	S	-	-	-	Protein of unknown function (DUF3408)
APKMJDPJ_00942	2.54e-101	-	-	-	-	-	-	-	-
APKMJDPJ_00943	2.42e-70	-	-	-	S	-	-	-	Helix-turn-helix domain
APKMJDPJ_00944	5.2e-82	-	-	-	-	-	-	-	-
APKMJDPJ_00945	2.46e-48	-	-	-	-	-	-	-	-
APKMJDPJ_00946	1.25e-240	-	-	-	C	-	-	-	aldo keto reductase
APKMJDPJ_00947	2.78e-226	-	-	-	K	-	-	-	transcriptional regulator pa4120 SWALL Q9HWR1 (EMBL AE004828) (303 aa) fasta scores E()
APKMJDPJ_00948	2.44e-268	-	-	-	-	-	-	-	-
APKMJDPJ_00949	2.62e-262	-	-	-	C	-	-	-	aldo keto reductase
APKMJDPJ_00950	5.56e-230	-	-	-	S	-	-	-	Flavin reductase like domain
APKMJDPJ_00951	1.79e-208	-	-	-	S	-	-	-	aldo keto reductase family
APKMJDPJ_00952	1.23e-67	ytbE	-	-	S	-	-	-	Aldo/keto reductase family
APKMJDPJ_00953	8.3e-18	akr5f	-	-	S	-	-	-	aldo keto reductase family
APKMJDPJ_00954	7.6e-153	-	-	-	M	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_00955	0.0	-	-	-	V	-	-	-	MATE efflux family protein
APKMJDPJ_00956	7.07e-297	patB	4.4.1.8	-	E	ko:K14155	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko01000,ko01007	COG COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities
APKMJDPJ_00957	1.34e-230	-	-	-	C	-	-	-	aldo keto reductase
APKMJDPJ_00958	3.09e-247	-	4.1.1.52	-	S	ko:K22213	-	ko00000,ko01000	Amidohydrolase
APKMJDPJ_00959	4.08e-194	-	-	-	IQ	-	-	-	Short chain dehydrogenase
APKMJDPJ_00960	6.44e-200	-	-	-	K	-	-	-	transcriptional regulator (AraC family)
APKMJDPJ_00961	1.78e-205	-	4.1.1.44	-	S	ko:K01607	ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220	ko00000,ko00001,ko01000	protein contains double-stranded beta-helix domain
APKMJDPJ_00962	1e-136	-	-	-	C	-	-	-	Flavodoxin
APKMJDPJ_00963	9.28e-14	-	-	-	C	ko:K19955	-	ko00000,ko01000	Psort location Cytoplasmic, score
APKMJDPJ_00964	8.79e-86	-	-	-	S	-	-	-	maltose O-acetyltransferase activity
APKMJDPJ_00965	8.51e-270	romA	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_00967	1.87e-82	-	-	-	I	-	-	-	transferase activity, transferring acyl groups other than amino-acyl groups
APKMJDPJ_00968	1.14e-174	-	-	-	IQ	-	-	-	KR domain
APKMJDPJ_00969	3.71e-277	-	-	-	C	-	-	-	aldo keto reductase
APKMJDPJ_00970	4.5e-164	-	-	-	H	-	-	-	RibD C-terminal domain
APKMJDPJ_00971	1.9e-258	-	-	-	S	ko:K06889	-	ko00000	of the alpha beta superfamily
APKMJDPJ_00972	1.84e-302	-	-	-	S	ko:K07148	-	ko00000	Protein of unknown function (DUF418)
APKMJDPJ_00973	3.94e-251	-	-	-	C	-	-	-	aldo keto reductase
APKMJDPJ_00974	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
APKMJDPJ_00975	0.0	-	-	-	E	ko:K21572	-	ko00000,ko02000	SusD family
APKMJDPJ_00976	0.0	-	-	-	P	-	-	-	Arylsulfatase
APKMJDPJ_00977	1.41e-154	-	-	-	M	-	-	-	COG NOG27406 non supervised orthologous group
APKMJDPJ_00978	1.03e-157	-	-	-	S	-	-	-	COG NOG26965 non supervised orthologous group
APKMJDPJ_00979	0.0	-	-	-	S	-	-	-	PS-10 peptidase S37
APKMJDPJ_00980	2.51e-74	-	-	-	K	-	-	-	Transcriptional regulator, MarR
APKMJDPJ_00981	0.0	cdr	-	-	P	-	-	-	Belongs to the sulfur carrier protein TusA family
APKMJDPJ_00983	0.0	-	2.7.2.4	-	E	ko:K00928	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the aspartokinase family
APKMJDPJ_00984	0.0	-	-	-	T	ko:K02481	-	ko00000,ko02022	acetoacetate metabolism regulatory protein AtoC
APKMJDPJ_00985	0.0	kdpA	3.6.3.12	-	P	ko:K01546	ko02020,map02020	ko00000,ko00001,ko01000	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
APKMJDPJ_00986	0.0	kdpB	3.6.3.12	-	P	ko:K01547	ko02020,map02020	ko00000,ko00001,ko01000	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
APKMJDPJ_00987	6.76e-131	kdpC	3.6.3.12	-	P	ko:K01548	ko02020,map02020	ko00000,ko00001,ko01000	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
APKMJDPJ_00988	1.02e-181	-	-	-	S	-	-	-	COG NOG26951 non supervised orthologous group
APKMJDPJ_00989	3.05e-260	kdpD	2.7.13.3	-	T	ko:K07646	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Psort location Cytoplasmic, score 8.96
APKMJDPJ_00990	0.0	-	-	-	T	-	-	-	ATPase histidine kinase DNA gyrase B HSP90 domain protein
APKMJDPJ_00991	2.77e-128	-	-	-	K	ko:K03088	-	ko00000,ko03021	RNA polymerase sigma-70 factor, ECF subfamily K00960
APKMJDPJ_00992	8.53e-245	-	-	-	PT	-	-	-	Domain of unknown function (DUF4974)
APKMJDPJ_00993	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
APKMJDPJ_00994	0.0	-	-	-	M	ko:K21572	-	ko00000,ko02000	COG NOG32048 non supervised orthologous group
APKMJDPJ_00995	0.0	-	-	-	-	-	-	-	-
APKMJDPJ_00996	0.0	-	-	-	S	-	-	-	COG NOG06097 non supervised orthologous group
APKMJDPJ_00997	5.05e-183	-	-	-	S	-	-	-	NigD-like N-terminal OB domain
APKMJDPJ_00998	8.73e-154	-	-	-	S	-	-	-	Lipocalin-like
APKMJDPJ_01000	1.02e-90	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_01001	0.0	-	-	-	S	ko:K07091	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Permease, YjgP YjgQ family
APKMJDPJ_01002	3.01e-293	ribBA	3.5.4.25, 4.1.99.12	-	H	ko:K14652	ko00740,ko00790,ko01100,ko01110,map00740,map00790,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
APKMJDPJ_01003	3.6e-286	aspC	2.6.1.1	-	E	ko:K00812	ko00220,ko00250,ko00270,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko01000,ko01007	COG0436 Aspartate tyrosine aromatic aminotransferase
APKMJDPJ_01004	0.0	-	3.2.1.40	-	G	ko:K05989	-	ko00000,ko01000	Alpha-L-rhamnosidase N-terminal domain protein
APKMJDPJ_01005	7.14e-20	-	-	-	C	-	-	-	4Fe-4S binding domain
APKMJDPJ_01006	4.29e-227	metAA	2.3.1.46	-	E	ko:K00651	ko00270,ko00920,ko01100,ko01110,ko01230,map00270,map00920,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
APKMJDPJ_01007	0.0	prtQ	-	-	O	ko:K08303	ko05120,map05120	ko00000,ko00001,ko01000,ko01002	Psort location Cytoplasmic, score 8.96
APKMJDPJ_01008	1.4e-237	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
APKMJDPJ_01009	0.0	-	-	-	M	ko:K02014	-	ko00000,ko02000	Psort location OuterMembrane, score 10.00
APKMJDPJ_01010	1.78e-139	-	-	-	K	-	-	-	COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
APKMJDPJ_01011	0.0	-	-	-	S	ko:K07137	-	ko00000	FAD-dependent
APKMJDPJ_01012	1.16e-80	-	-	-	P	-	-	-	PD-(D/E)XK nuclease superfamily
APKMJDPJ_01013	0.0	radA	-	-	O	ko:K04485	-	ko00000,ko03400	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
APKMJDPJ_01014	2.21e-247	ansA	3.5.1.1	-	EJ	ko:K01424	ko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110	ko00000,ko00001,ko01000	L-asparaginase, type I
APKMJDPJ_01016	0.0	thrA	1.1.1.3, 2.7.2.4	-	E	ko:K12524	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	homoserine dehydrogenase
APKMJDPJ_01017	2.22e-299	-	5.4.2.12	-	G	ko:K15635	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	homoserine kinase
APKMJDPJ_01018	1.92e-316	thrC	4.2.3.1	-	E	ko:K01733	ko00260,ko00750,ko01100,ko01110,ko01120,ko01230,map00260,map00750,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Threonine synthase
APKMJDPJ_01019	1.45e-210	-	-	-	EG	-	-	-	COG COG0697 Permeases of the drug metabolite transporter (DMT) superfamily
APKMJDPJ_01020	8.83e-153	thiN	2.7.6.2	-	H	ko:K00949	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000	Thiamine diphosphokinase
APKMJDPJ_01021	1.2e-119	pnuC	-	-	H	ko:K03811	-	ko00000,ko02000	nicotinamide mononucleotide transporter
APKMJDPJ_01022	0.0	-	-	-	P	ko:K02014	-	ko00000,ko02000	COG COG1629 Outer membrane receptor proteins, mostly Fe transport
APKMJDPJ_01023	4.58e-195	mscS	-	-	M	ko:K03442	-	ko00000,ko02000	Small-conductance mechanosensitive channel
APKMJDPJ_01024	1.27e-50	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_01025	1.16e-133	-	-	-	K	ko:K03088	-	ko00000,ko03021	RNA polymerase sigma-70 factor
APKMJDPJ_01026	7.5e-237	-	-	-	PT	-	-	-	COG3712 Fe2 -dicitrate sensor, membrane component
APKMJDPJ_01027	0.0	-	-	-	G	-	-	-	Glycosyl hydrolase family 65, N-terminal domain
APKMJDPJ_01028	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
APKMJDPJ_01029	0.0	-	-	-	F	ko:K21572	-	ko00000,ko02000	SusD family
APKMJDPJ_01030	0.0	-	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 2 family
APKMJDPJ_01031	0.0	-	-	-	G	-	-	-	Belongs to the glycosyl hydrolase 2 family
APKMJDPJ_01032	0.0	-	-	-	G	-	-	-	candidate polyfunctional acetylxylan esterase b-xylosidase A-L-arabinofuranosidase, CBM9 module, glycoside hydrolase family 43 protein and carbohydrate esterase family 6 protein
APKMJDPJ_01033	2.65e-36	-	-	-	S	-	-	-	COG NOG17973 non supervised orthologous group
APKMJDPJ_01034	4.32e-299	-	-	-	S	-	-	-	amine dehydrogenase activity
APKMJDPJ_01035	0.0	-	-	-	H	-	-	-	Psort location OuterMembrane, score
APKMJDPJ_01036	2.7e-09	tcmP	-	-	Q	-	-	-	COG3315 O-Methyltransferase involved in polyketide biosynthesis
APKMJDPJ_01037	1.44e-258	pchR	-	-	K	-	-	-	transcriptional regulator
APKMJDPJ_01039	4.01e-256	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_01040	8.15e-136	tdk	2.7.1.21	-	F	ko:K00857	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	thymidine kinase
APKMJDPJ_01041	3.56e-166	-	-	-	S	-	-	-	COG NOG23390 non supervised orthologous group
APKMJDPJ_01042	6.38e-159	rsmI	2.1.1.198	-	H	ko:K07056	-	ko00000,ko01000,ko03009	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
APKMJDPJ_01043	2.1e-160	-	-	-	S	-	-	-	Transposase
APKMJDPJ_01044	2.06e-167	yjjG	-	-	S	ko:K07025	-	ko00000	HAD hydrolase, TIGR02254 family
APKMJDPJ_01045	6.1e-143	-	-	-	U	ko:K05595	-	ko00000,ko02000	UPF0056 membrane protein
APKMJDPJ_01046	0.0	-	-	-	H	-	-	-	COG NOG26372 non supervised orthologous group
APKMJDPJ_01047	0.0	-	-	-	NPU	-	-	-	Psort location OuterMembrane, score 9.49
APKMJDPJ_01048	2.82e-281	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
APKMJDPJ_01049	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
APKMJDPJ_01050	0.0	-	-	-	S	ko:K21572	-	ko00000,ko02000	Pfam:SusD
APKMJDPJ_01052	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
APKMJDPJ_01053	0.0	-	-	-	J	ko:K21572	-	ko00000,ko02000	Pfam:SusD
APKMJDPJ_01054	0.0	-	-	-	P	-	-	-	TonB dependent receptor
APKMJDPJ_01055	0.0	-	-	-	M	ko:K21572	-	ko00000,ko02000	Pfam:SusD
APKMJDPJ_01056	4.41e-288	hflX	-	-	S	ko:K03665	-	ko00000,ko03009	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
APKMJDPJ_01057	0.0	-	-	-	JM	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_01058	0.0	pepN	3.4.11.2	-	E	ko:K01256	ko00480,ko01100,map00480,map01100	ko00000,ko00001,ko01000,ko01002	Peptidase family M1 domain
APKMJDPJ_01059	0.0	fumB	4.2.1.2	-	C	ko:K01676	ko00020,ko00620,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00620,map00720,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible hydration of fumarate to (S)- malate
APKMJDPJ_01060	1.85e-289	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_01061	0.0	-	3.2.1.50	-	G	ko:K01205	ko00531,ko01100,ko04142,map00531,map01100,map04142	ko00000,ko00001,ko00002,ko01000,ko04147	Alpha-N-acetylglucosaminidase
APKMJDPJ_01062	0.0	-	-	-	E	ko:K03294	-	ko00000	Amino acid permease
APKMJDPJ_01063	4.62e-309	tolC	-	-	MU	-	-	-	Psort location OuterMembrane, score
APKMJDPJ_01064	0.0	bepE_4	-	-	V	ko:K03296,ko:K18138	ko01501,ko01503,map01501,map01503	ko00000,ko00001,ko00002,ko01504,ko02000	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
APKMJDPJ_01065	5.77e-246	-	-	-	M	ko:K03585	ko01501,ko01503,map01501,map01503	ko00000,ko00001,ko00002,ko01504,ko02000,ko03036	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
APKMJDPJ_01066	1.26e-304	-	-	-	V	ko:K20345	ko02024,map02024	ko00000,ko00001,ko02000	secretion protein
APKMJDPJ_01067	0.0	-	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter, ATP-binding protein
APKMJDPJ_01071	0.0	-	-	-	M	-	-	-	N-terminal domain of galactosyltransferase
APKMJDPJ_01072	4.69e-299	-	-	-	CG	-	-	-	glycosyl
APKMJDPJ_01073	9.39e-229	rsgA	3.1.3.100	-	S	ko:K06949	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000,ko03009	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
APKMJDPJ_01074	6.51e-122	frr	-	-	J	ko:K02838	-	ko00000,ko03012	Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
APKMJDPJ_01075	2.34e-225	-	-	-	T	-	-	-	Bacterial SH3 domain
APKMJDPJ_01076	9.71e-127	-	-	-	S	-	-	-	L,D-transpeptidase catalytic domain
APKMJDPJ_01077	0.0	-	-	-	-	-	-	-	-
APKMJDPJ_01078	0.0	-	-	-	O	-	-	-	Heat shock 70 kDa protein
APKMJDPJ_01079	3.53e-162	-	-	-	O	ko:K03687	-	ko00000,ko03029,ko03110	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
APKMJDPJ_01080	1.15e-281	-	-	-	S	-	-	-	6-bladed beta-propeller
APKMJDPJ_01081	4.28e-163	pyrH	2.7.4.22	-	F	ko:K09903	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphorylation of UMP to UDP
APKMJDPJ_01082	2.38e-309	dinF	-	-	V	ko:K03327	-	ko00000,ko02000	MATE efflux family protein
APKMJDPJ_01083	4.31e-235	-	-	-	G	-	-	-	Glycosyl hydrolases family 16
APKMJDPJ_01084	2.76e-153	-	-	-	S	-	-	-	COG NOG28155 non supervised orthologous group
APKMJDPJ_01085	3.53e-315	-	-	-	G	-	-	-	COG NOG27433 non supervised orthologous group
APKMJDPJ_01086	1.69e-181	birA	6.3.4.15	-	H	ko:K03524	ko00780,ko01100,map00780,map01100	ko00000,ko00001,ko01000,ko03000	biotin acetyl-CoA-carboxylase ligase
APKMJDPJ_01087	3.4e-82	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_01088	1.54e-84	-	-	-	L	ko:K07460	-	ko00000	Belongs to the UPF0102 family
APKMJDPJ_01089	1.83e-49	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_01090	3.79e-101	tadA	3.5.4.33	-	FJ	ko:K11991	-	ko00000,ko01000,ko03016	Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
APKMJDPJ_01091	4.47e-56	-	-	-	S	-	-	-	Domain of unknown function (DUF4834)
APKMJDPJ_01092	1.05e-163	pssA	2.7.8.8	-	I	ko:K17103	ko00260,ko00564,ko01100,ko01110,map00260,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
APKMJDPJ_01093	1.15e-163	psd	4.1.1.65	-	I	ko:K01613	ko00564,ko01100,ko01110,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer)
APKMJDPJ_01094	0.0	dnaE	2.7.7.7	-	L	ko:K02337	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III alpha subunit
APKMJDPJ_01095	7.02e-73	trxA	-	-	O	ko:K03671	ko04621,ko05418,map04621,map05418	ko00000,ko00001,ko03110	Belongs to the thioredoxin family
APKMJDPJ_01096	1.38e-71	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_01097	1.88e-165	-	-	-	S	-	-	-	serine threonine protein kinase
APKMJDPJ_01099	5.87e-228	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_01100	2.15e-209	-	-	-	-	-	-	-	-
APKMJDPJ_01101	8.42e-142	-	-	-	S	-	-	-	Domain of unknown function (DUF4129)
APKMJDPJ_01102	2.07e-301	-	-	-	S	-	-	-	COG NOG26634 non supervised orthologous group
APKMJDPJ_01103	8.01e-223	-	-	-	S	ko:K03924	-	ko00000,ko01000	ATPase family associated with various cellular activities (AAA)
APKMJDPJ_01104	7.68e-310	-	-	-	S	-	-	-	conserved protein (some members contain a von Willebrand factor type A (vWA) domain)
APKMJDPJ_01105	1.82e-45	-	-	-	S	-	-	-	COG NOG34862 non supervised orthologous group
APKMJDPJ_01106	3.05e-95	yjeE	-	-	S	ko:K06925	-	ko00000,ko03016	Psort location Cytoplasmic, score
APKMJDPJ_01107	1.31e-178	znuB	-	-	P	ko:K02075,ko:K09816	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC 3 transport family
APKMJDPJ_01108	1.1e-93	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_01109	4.8e-254	-	-	-	M	-	-	-	Peptidase, M28 family
APKMJDPJ_01110	1.71e-285	-	-	-	-	-	-	-	-
APKMJDPJ_01111	0.0	-	-	-	G	-	-	-	Glycosyl hydrolase family 92
APKMJDPJ_01112	0.0	-	-	-	T	-	-	-	COG NOG26059 non supervised orthologous group
APKMJDPJ_01114	4.98e-214	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
APKMJDPJ_01115	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
APKMJDPJ_01116	0.0	-	-	-	S	ko:K21572	-	ko00000,ko02000	SusD family
APKMJDPJ_01117	1.9e-237	-	-	-	G	-	-	-	Domain of unknown function (DUF1735)
APKMJDPJ_01118	0.0	-	3.2.1.51	GH29	G	ko:K01206	ko00511,map00511	ko00000,ko00001,ko01000,ko04147	Alpha-L-fucosidase
APKMJDPJ_01119	0.0	-	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	beta-galactosidase
APKMJDPJ_01120	5.46e-299	aroA	2.5.1.19	-	E	ko:K00800	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
APKMJDPJ_01121	1.41e-209	thiD	2.7.1.49, 2.7.4.7	-	K	ko:K00941	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	transcriptional regulator (AraC family)
APKMJDPJ_01122	3.57e-282	-	-	-	T	-	-	-	His Kinase A (phosphoacceptor) domain
APKMJDPJ_01123	0.0	-	3.2.1.52	GH20	G	ko:K12373	ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142	ko00000,ko00001,ko00002,ko01000,ko03110	Glycosyl hydrolase family 20, catalytic domain protein
APKMJDPJ_01124	5.56e-270	-	-	-	M	-	-	-	Acyltransferase family
APKMJDPJ_01126	1.61e-93	-	-	-	K	-	-	-	DNA-templated transcription, initiation
APKMJDPJ_01127	7.78e-261	aroB	4.2.3.4	-	E	ko:K01735	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
APKMJDPJ_01128	1.21e-85	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
APKMJDPJ_01129	0.0	-	-	-	H	-	-	-	Psort location OuterMembrane, score
APKMJDPJ_01130	0.0	cls	-	-	I	ko:K06131	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
APKMJDPJ_01131	8.12e-117	rsmD	2.1.1.171	-	L	ko:K08316	-	ko00000,ko01000,ko03009	RNA methyltransferase, RsmD family
APKMJDPJ_01132	9.84e-192	-	-	-	S	-	-	-	Protein of unknown function (DUF3822)
APKMJDPJ_01133	2.06e-161	-	-	-	S	-	-	-	COG NOG19144 non supervised orthologous group
APKMJDPJ_01134	0.0	recD2_2	3.1.11.5	-	L	ko:K01144	-	ko00000,ko01000	COG0507 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member
APKMJDPJ_01135	0.0	-	-	-	S	-	-	-	Susd and RagB outer membrane lipoprotein
APKMJDPJ_01136	0.0	-	-	-	P	-	-	-	Psort location OuterMembrane, score
APKMJDPJ_01137	0.0	-	-	-	G	-	-	-	Alpha-1,2-mannosidase
APKMJDPJ_01138	0.0	-	-	-	G	-	-	-	Alpha-1,2-mannosidase
APKMJDPJ_01139	1.35e-239	-	-	-	PT	-	-	-	COG3712 Fe2 -dicitrate sensor, membrane component
APKMJDPJ_01140	1.09e-128	-	-	-	K	ko:K03088	-	ko00000,ko03021	RNA polymerase sigma-70 factor
APKMJDPJ_01141	0.0	-	-	-	G	-	-	-	Alpha-1,2-mannosidase
APKMJDPJ_01142	1.6e-75	bcr	-	-	EGP	ko:K03446,ko:K07552	-	ko00000,ko00002,ko02000	Psort location CytoplasmicMembrane, score
APKMJDPJ_01143	6.12e-118	bcr	-	-	EGP	ko:K03446,ko:K07552	-	ko00000,ko00002,ko02000	Psort location CytoplasmicMembrane, score
APKMJDPJ_01144	1.36e-208	thiD	2.7.1.49, 2.7.4.7	-	K	ko:K00941	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	transcriptional regulator (AraC family)
APKMJDPJ_01145	0.0	alaS	6.1.1.7	-	J	ko:K01872	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
APKMJDPJ_01146	4.69e-235	-	-	-	M	-	-	-	Peptidase, M23
APKMJDPJ_01147	1.95e-78	ycgE	-	-	K	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_01148	0.0	relA	2.7.6.5	-	KT	ko:K00951	ko00230,map00230	ko00000,ko00001,ko01000	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
APKMJDPJ_01149	0.0	mltD	-	-	M	ko:K08307	-	ko00000,ko01000,ko01011	Transglycosylase SLT domain
APKMJDPJ_01150	8.82e-207	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
APKMJDPJ_01151	3.55e-201	parB	-	-	K	ko:K03497	-	ko00000,ko03000,ko03036,ko04812	Belongs to the ParB family
APKMJDPJ_01152	7.94e-173	soj	-	-	D	ko:K03496	-	ko00000,ko03036,ko04812	CobQ CobB MinD ParA nucleotide binding domain
APKMJDPJ_01153	8.8e-195	surE	3.1.3.5	-	S	ko:K03787	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
APKMJDPJ_01154	1.87e-271	lpxB	2.4.1.182	GT19	M	ko:K00748	ko00540,ko01100,map00540,map01100	ko00000,ko00001,ko00002,ko01000,ko01003,ko01005	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
APKMJDPJ_01155	9.8e-179	-	-	-	S	-	-	-	COG NOG29298 non supervised orthologous group
APKMJDPJ_01156	3.05e-198	cdsA	2.7.7.41	-	M	ko:K00981	ko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070	ko00000,ko00001,ko00002,ko01000	Belongs to the CDS family
APKMJDPJ_01157	0.0	ftsH	-	-	O	ko:K03798	-	ko00000,ko00002,ko01000,ko01002,ko03110	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
APKMJDPJ_01158	1.49e-81	rsfS	-	-	J	ko:K09710	-	ko00000,ko03009	Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
APKMJDPJ_01160	0.0	-	-	-	A	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_01161	1.78e-265	mgtE	-	-	P	ko:K06213	-	ko00000,ko02000	Acts as a magnesium transporter
APKMJDPJ_01162	4.88e-196	ksgA	2.1.1.182	-	J	ko:K02528	-	ko00000,ko01000,ko03009	Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
APKMJDPJ_01163	6.15e-228	-	-	-	S	ko:K07027	-	ko00000,ko02000	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_01165	0.0	pepD_2	-	-	E	ko:K01270	ko00480,ko01100,map00480,map01100	ko00000,ko00001,ko01000,ko01002	Xaa-His dipeptidase
APKMJDPJ_01166	0.0	-	-	-	S	-	-	-	MG2 domain
APKMJDPJ_01167	4.38e-289	-	-	-	S	-	-	-	Domain of unknown function (DUF4249)
APKMJDPJ_01168	0.0	-	-	-	M	-	-	-	CarboxypepD_reg-like domain
APKMJDPJ_01169	1.57e-179	-	-	-	P	-	-	-	TonB-dependent receptor
APKMJDPJ_01170	7.37e-266	-	-	-	S	-	-	-	COG2373 Large extracellular alpha-helical protein
APKMJDPJ_01172	3.85e-283	-	-	-	-	-	-	-	-
APKMJDPJ_01173	1.71e-08	-	-	-	S	-	-	-	Protein of unknown function (DUF1573)
APKMJDPJ_01174	4.55e-254	-	-	-	S	-	-	-	COG NOG19146 non supervised orthologous group
APKMJDPJ_01175	1.63e-258	argK	-	-	E	ko:K07588	-	ko00000,ko01000	Lao Ao transport system ATPase
APKMJDPJ_01176	7.48e-206	-	-	-	EG	-	-	-	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_01177	2.59e-184	-	-	-	P	-	-	-	ATP-binding protein involved in virulence
APKMJDPJ_01178	1.87e-195	-	-	-	P	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_01179	4.11e-292	ybdG_2	-	-	M	ko:K16053	-	ko00000,ko02000	Psort location CytoplasmicMembrane, score
APKMJDPJ_01180	6.54e-211	-	-	-	K	-	-	-	Transcriptional regulator, AraC family
APKMJDPJ_01181	1.52e-238	-	2.7.11.1	-	S	ko:K07154	-	ko00000,ko01000,ko01001,ko02048	HipA-like C-terminal domain
APKMJDPJ_01182	1.5e-74	-	2.7.11.1	-	S	ko:K07154	-	ko00000,ko01000,ko01001,ko02048	HipA N-terminal domain
APKMJDPJ_01183	1.61e-39	-	-	-	K	-	-	-	Helix-turn-helix domain
APKMJDPJ_01184	1.46e-206	-	-	-	L	-	-	-	COG NOG19076 non supervised orthologous group
APKMJDPJ_01185	7.52e-80	-	-	-	S	-	-	-	WYL_2, Sm-like SH3 beta-barrel fold
APKMJDPJ_01186	1.44e-121	-	-	-	K	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_01187	2.11e-113	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_01188	1.49e-292	-	-	-	GM	-	-	-	Polysaccharide biosynthesis protein
APKMJDPJ_01189	2.48e-276	pseC	-	-	E	-	-	-	Belongs to the DegT DnrJ EryC1 family
APKMJDPJ_01190	2.43e-70	-	-	-	S	-	-	-	Bacterial transferase hexapeptide (six repeats)
APKMJDPJ_01191	1.75e-256	gmhB	2.7.7.71	-	M	ko:K15669	ko00540,map00540	ko00000,ko00001,ko01000	Nucleotidyl transferase
APKMJDPJ_01192	0.0	wzxC	-	-	S	ko:K03328,ko:K16695	-	ko00000,ko02000	Polysaccharide biosynthesis protein
APKMJDPJ_01193	2.85e-287	-	-	-	M	-	-	-	transferase activity, transferring glycosyl groups
APKMJDPJ_01194	1.66e-08	-	-	-	S	ko:K19419	-	ko00000,ko02000	EpsG family
APKMJDPJ_01195	9.36e-278	-	-	-	M	-	-	-	transferase activity, transferring glycosyl groups
APKMJDPJ_01196	2.68e-254	-	-	-	G	-	-	-	polysaccharide deacetylase
APKMJDPJ_01197	3.07e-264	-	-	-	M	-	-	-	Glycosyl transferases group 1
APKMJDPJ_01198	1.62e-298	-	1.1.1.336	-	M	ko:K02472	ko00520,ko05111,map00520,map05111	ko00000,ko00001,ko01000	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
APKMJDPJ_01199	2.42e-283	-	5.1.3.14	-	G	ko:K01791	ko00520,ko01100,ko05111,map00520,map01100,map05111	ko00000,ko00001,ko00002,ko01000,ko01005	UDP-N-acetylglucosamine 2-epimerase
APKMJDPJ_01200	7.73e-12	-	-	-	L	-	-	-	Transposase IS66 family
APKMJDPJ_01201	5.39e-209	-	-	-	S	-	-	-	COG NOG37815 non supervised orthologous group
APKMJDPJ_01202	0.0	-	-	-	S	-	-	-	Heparinase II/III N-terminus
APKMJDPJ_01203	9.86e-304	-	-	-	M	-	-	-	glycosyltransferase protein
APKMJDPJ_01204	4.38e-146	pglC	-	-	M	-	-	-	Psort location CytoplasmicMembrane, score
APKMJDPJ_01205	4.16e-122	neuD	-	-	S	ko:K19429	-	ko00000,ko01000	sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family
APKMJDPJ_01207	7.24e-141	fic	-	-	D	ko:K04095	-	ko00000,ko03036	Fic/DOC family
APKMJDPJ_01208	5.68e-282	epsN	-	-	E	-	-	-	Belongs to the DegT DnrJ EryC1 family
APKMJDPJ_01209	2.21e-109	-	-	-	L	-	-	-	DNA-binding protein
APKMJDPJ_01210	1.89e-07	-	-	-	-	-	-	-	-
APKMJDPJ_01211	0.0	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_01212	2.99e-248	gpr	-	-	C	ko:K19265	-	ko00000,ko01000	Oxidoreductase, aldo keto reductase family protein
APKMJDPJ_01213	0.0	-	3.2.1.21	GH3	G	ko:K05349	ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110	ko00000,ko00001,ko01000	Psort location Periplasmic, score
APKMJDPJ_01214	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
APKMJDPJ_01215	0.0	-	-	-	GM	ko:K21572	-	ko00000,ko02000	Pfam:SusD
APKMJDPJ_01216	3.45e-277	-	-	-	-	-	-	-	-
APKMJDPJ_01217	0.0	-	-	-	-	-	-	-	-
APKMJDPJ_01218	0.0	-	-	-	G	-	-	-	Glycosyl hydrolase family 67 N-terminus
APKMJDPJ_01219	4.01e-288	-	3.2.1.78	GH26	G	ko:K01218	ko00051,ko02024,map00051,map02024	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 26 family
APKMJDPJ_01220	2.75e-302	-	3.2.1.78	-	G	ko:K19355	ko00051,map00051	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 5 (cellulase A) family
APKMJDPJ_01221	0.0	-	3.2.1.21	GH3	G	ko:K05349	ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110	ko00000,ko00001,ko01000	glycosyl hydrolase, family 3
APKMJDPJ_01222	0.0	-	-	-	H	-	-	-	Uroporphyrinogen decarboxylase (URO-D)
APKMJDPJ_01223	4.97e-142	-	-	-	E	-	-	-	B12 binding domain
APKMJDPJ_01224	1.57e-173	-	-	-	E	-	-	-	Vitamin B12 dependent methionine synthase, activation domain protein
APKMJDPJ_01225	1.26e-245	-	4.1.1.37	-	H	ko:K01599	ko00860,ko01100,ko01110,map00860,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Uroporphyrinogen decarboxylase (URO-D)
APKMJDPJ_01226	2.94e-287	-	3.2.1.78	GH26	G	ko:K01218,ko:K19355	ko00051,ko02024,map00051,map02024	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 26 family
APKMJDPJ_01227	2.2e-297	-	2.4.1.281	-	G	ko:K16212	-	ko00000,ko01000	Converts 4-O-beta-D-mannopyranosyl-D-glucopyranose (Man- Glc) to mannose 1-phosphate (Man1P) and glucose
APKMJDPJ_01228	0.0	yicJ_1	-	-	G	ko:K03292	-	ko00000	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_01229	2.91e-303	bfce	5.1.3.11	-	G	ko:K16213	-	ko00000,ko01000	Catalyzes the reversible epimerization of cellobiose to 4-O-beta-D-glucopyranosyl-D-mannose (Glc-Man)
APKMJDPJ_01230	0.0	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_01231	0.0	-	-	-	U	-	-	-	WD40-like Beta Propeller Repeat
APKMJDPJ_01232	2.05e-279	-	-	-	J	-	-	-	endoribonuclease L-PSP
APKMJDPJ_01233	1.07e-288	-	-	-	N	-	-	-	COG NOG06100 non supervised orthologous group
APKMJDPJ_01234	6.89e-295	-	-	-	N	-	-	-	COG NOG06100 non supervised orthologous group
APKMJDPJ_01235	0.0	-	-	-	M	-	-	-	TonB-dependent receptor
APKMJDPJ_01236	0.0	-	-	-	T	-	-	-	PAS domain S-box protein
APKMJDPJ_01237	0.0	nuoN	1.6.5.3	-	C	ko:K00343	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
APKMJDPJ_01238	0.0	nuoM	1.6.5.3	-	C	ko:K00342	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	proton-translocating NADH-quinone oxidoreductase, chain M
APKMJDPJ_01239	0.0	nuoL	1.6.5.3	-	CP	ko:K00341	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	COG1009 NADH ubiquinone oxidoreductase subunit 5 (chain L) Multisubunit Na H antiporter MnhA subunit
APKMJDPJ_01240	2.67e-63	nuoK	1.6.5.3	-	C	ko:K00340	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
APKMJDPJ_01241	9.81e-107	nuoJ	1.6.5.3	-	C	ko:K00339	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	COG0839 NADH ubiquinone oxidoreductase subunit 6 (chain J)
APKMJDPJ_01242	1.73e-97	nuoI	1.6.5.3	-	C	ko:K00338	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
APKMJDPJ_01243	1.23e-255	nuoH	1.6.5.3	-	C	ko:K00337	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
APKMJDPJ_01244	0.0	nuoC	1.6.5.3	-	C	ko:K00333,ko:K13378	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
APKMJDPJ_01245	1.53e-140	nuoB	1.6.5.3	-	C	ko:K00331	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
APKMJDPJ_01246	6.17e-75	nuoA	1.6.5.3	-	C	ko:K00330	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
APKMJDPJ_01247	6.43e-88	-	-	-	-	-	-	-	-
APKMJDPJ_01248	0.0	trkH	-	-	P	ko:K03498	-	ko00000,ko02000	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_01249	0.0	trkA	-	-	C	ko:K03499	-	ko00000,ko02000	COG0569 K transport systems NAD-binding component
APKMJDPJ_01250	0.0	dxs	2.2.1.7	-	H	ko:K01662	ko00730,ko00900,ko01100,ko01110,ko01130,map00730,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
APKMJDPJ_01251	0.0	-	-	-	O	ko:K06889	-	ko00000	COG COG1073 Hydrolases of the alpha beta superfamily
APKMJDPJ_01252	6.63e-62	-	-	-	-	-	-	-	-
APKMJDPJ_01253	2.07e-155	-	3.1.3.18	-	S	ko:K01091	ko00630,ko01100,ko01110,ko01130,map00630,map01100,map01110,map01130	ko00000,ko00001,ko01000	HAD hydrolase, family IA, variant
APKMJDPJ_01254	0.0	-	-	-	P	-	-	-	COG COG3119 Arylsulfatase A and related enzymes
APKMJDPJ_01255	0.0	-	-	-	G	-	-	-	Raffinose synthase or seed imbibition protein Sip1
APKMJDPJ_01256	0.0	-	-	-	G	-	-	-	Alpha-L-fucosidase
APKMJDPJ_01257	0.0	-	-	-	P	-	-	-	COG COG3119 Arylsulfatase A and related enzymes
APKMJDPJ_01258	0.0	-	-	-	S	ko:K21572	-	ko00000,ko02000	SusD family
APKMJDPJ_01259	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
APKMJDPJ_01260	0.0	-	-	-	T	-	-	-	cheY-homologous receiver domain
APKMJDPJ_01261	0.0	exuT	-	-	G	ko:K08191	-	ko00000,ko02000	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_01262	0.0	-	3.2.1.51	GH29	G	ko:K01206	ko00511,map00511	ko00000,ko00001,ko01000,ko04147	alpha-L-fucosidase
APKMJDPJ_01263	7.01e-316	-	-	-	S	-	-	-	Peptide-N-glycosidase F, N terminal
APKMJDPJ_01264	0.0	-	3.6.4.12	-	L	ko:K10742	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	COG COG1112 Superfamily I DNA and RNA helicases and helicase subunits
APKMJDPJ_01265	4.09e-248	oatA	-	-	I	-	-	-	Acyltransferase family
APKMJDPJ_01266	2.05e-184	tatC	-	-	U	ko:K03118	ko03060,ko03070,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
APKMJDPJ_01267	2.2e-29	tatA	-	-	U	ko:K03116	ko03060,ko03070,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system
APKMJDPJ_01268	0.0	alr	5.1.1.1	-	M	ko:K01775	ko00473,ko01100,ko01502,map00473,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
APKMJDPJ_01269	7.27e-242	-	-	-	E	-	-	-	GSCFA family
APKMJDPJ_01270	6.64e-79	-	-	-	K	-	-	-	Transcriptional regulator, BlaI MecI CopY family
APKMJDPJ_01271	0.0	-	-	-	KT	-	-	-	COG NOG25147 non supervised orthologous group
APKMJDPJ_01272	0.0	-	-	-	T	-	-	-	Psort location CytoplasmicMembrane, score
APKMJDPJ_01273	5.53e-287	-	-	-	S	-	-	-	6-bladed beta-propeller
APKMJDPJ_01276	1.04e-216	miaA	2.5.1.75	-	F	ko:K00791	ko00908,ko01100,ko01110,map00908,map01100,map01110	ko00000,ko00001,ko01000,ko01006,ko03016	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
APKMJDPJ_01277	2.1e-123	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_01278	2.78e-113	lpxA	2.3.1.129	-	M	ko:K00677	ko00540,ko01100,ko01503,map00540,map01100,map01503	ko00000,ko00001,ko00002,ko01000,ko01005	Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
APKMJDPJ_01279	0.0	fabZ	3.5.1.108, 4.2.1.59	-	IM	ko:K16363	ko00061,ko00540,ko01100,ko01212,map00061,map00540,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004,ko01005	Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis
APKMJDPJ_01280	3e-160	lpxD	2.3.1.191	-	M	ko:K02536	ko00540,ko01100,map00540,map01100	ko00000,ko00001,ko00002,ko01000,ko01005	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
APKMJDPJ_01281	1.69e-297	-	-	-	S	ko:K06885	-	ko00000	Psort location Cytoplasmic, score 8.96
APKMJDPJ_01282	9.85e-197	pyrF	4.1.1.23	-	F	ko:K01591	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the OMP decarboxylase family. Type 2 subfamily
APKMJDPJ_01283	3.57e-261	prfA	-	-	J	ko:K02835	-	ko00000,ko03012	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
APKMJDPJ_01284	5.96e-285	purM	6.3.3.1	-	F	ko:K01933	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Psort location Cytoplasmic, score
APKMJDPJ_01285	1.53e-128	lemA	-	-	S	ko:K03744	-	ko00000	LemA family
APKMJDPJ_01286	4.63e-202	-	-	-	S	ko:K06872	-	ko00000	COG1512 Beta-propeller domains of methanol dehydrogenase type
APKMJDPJ_01287	3.32e-241	-	-	-	S	ko:K06889	-	ko00000	of the alpha beta superfamily
APKMJDPJ_01288	6.15e-182	aroE	1.1.1.25	-	C	ko:K00014	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	COG0169 Shikimate 5-dehydrogenase
APKMJDPJ_01289	4.66e-176	menG	2.1.1.163, 2.1.1.201	-	H	ko:K03183	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
APKMJDPJ_01290	1.05e-227	purC	6.3.2.6	-	F	ko:K01923	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the SAICAR synthetase family
APKMJDPJ_01291	1.38e-230	phoH	-	-	T	ko:K06217	-	ko00000	phosphate starvation-inducible protein
APKMJDPJ_01292	1.7e-164	-	-	-	S	-	-	-	COG NOG26960 non supervised orthologous group
APKMJDPJ_01293	3.64e-206	yqiK	-	-	S	ko:K07192	ko04910,map04910	ko00000,ko00001,ko03036,ko04131,ko04147	SPFH Band 7 PHB domain protein
APKMJDPJ_01294	9.24e-114	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 9.46
APKMJDPJ_01295	0.0	glaB	-	-	M	-	-	-	Alpha-galactosidase. Removes both branched alpha-1,3- linked galactose residues of blood group B antigens and linear alpha-1,3-linked galactose structures
APKMJDPJ_01296	5.3e-286	-	-	-	S	-	-	-	Domain of unknown function (DUF4468) with TBP-like fold
APKMJDPJ_01297	5.93e-187	truA	5.4.99.12	-	J	ko:K06173	-	ko00000,ko01000,ko03016	Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
APKMJDPJ_01298	1.52e-208	-	-	-	EG	ko:K08978	-	ko00000,ko02000	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_01299	4.68e-153	-	-	-	S	-	-	-	COG NOG19149 non supervised orthologous group
APKMJDPJ_01300	8.17e-267	mdsC	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_01301	0.0	-	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	COG3250 Beta-galactosidase beta-glucuronidase
APKMJDPJ_01302	7.5e-207	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
APKMJDPJ_01303	0.0	-	-	-	S	-	-	-	Oxidoreductase NAD-binding domain protein
APKMJDPJ_01304	0.0	-	3.2.1.51	GH95	G	ko:K15923	ko00511,map00511	ko00000,ko00001,ko01000	COG NOG04001 non supervised orthologous group
APKMJDPJ_01305	0.0	-	-	-	G	-	-	-	Belongs to the glycosyl hydrolase 2 family
APKMJDPJ_01306	0.0	-	-	-	S	-	-	-	Tetratricopeptide repeat protein
APKMJDPJ_01307	0.0	xylE	-	-	P	ko:K02100,ko:K03444,ko:K08138	-	ko00000,ko02000	Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family
APKMJDPJ_01308	5.05e-226	-	-	-	K	-	-	-	Transcriptional regulator, AraC family
APKMJDPJ_01309	0.0	bglB_4	3.2.1.21	GH3	G	ko:K05349	ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 3 family
APKMJDPJ_01310	0.0	-	-	-	U	-	-	-	WD40-like Beta Propeller Repeat
APKMJDPJ_01311	0.0	-	-	-	-	-	-	-	-
APKMJDPJ_01312	0.0	-	-	-	F	ko:K21572	-	ko00000,ko02000	SusD family
APKMJDPJ_01313	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
APKMJDPJ_01314	0.0	-	-	-	F	ko:K21572	-	ko00000,ko02000	outer membrane protein, probably involved in nutrient binding BT0866 SWALL AAO75973 (EMBL AE016929) (632 aa) fasta scores E()
APKMJDPJ_01315	0.0	-	-	-	P	-	-	-	Secretin and TonB N terminus short domain
APKMJDPJ_01316	0.0	-	-	-	S	ko:K21572	-	ko00000,ko02000	SusD family
APKMJDPJ_01317	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
APKMJDPJ_01318	5.69e-121	-	-	-	K	ko:K03088	-	ko00000,ko03021	ECF sigma factor
APKMJDPJ_01319	6.97e-240	-	-	-	PT	-	-	-	Domain of unknown function (DUF4974)
APKMJDPJ_01320	0.0	-	-	-	P	-	-	-	Secretin and TonB N terminus short domain
APKMJDPJ_01321	0.0	-	-	-	F	ko:K21572	-	ko00000,ko02000	outer membrane protein, probably involved in nutrient binding BT0866 SWALL AAO75973 (EMBL AE016929) (632 aa) fasta scores E()
APKMJDPJ_01322	0.0	-	-	-	-	-	-	-	-
APKMJDPJ_01323	0.0	-	-	-	S	-	-	-	hydrolase activity, acting on glycosyl bonds
APKMJDPJ_01326	3.78e-117	ribH	2.5.1.78	-	H	ko:K00794	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin
APKMJDPJ_01327	3.37e-151	-	-	-	S	-	-	-	Tetratricopeptide repeat protein
APKMJDPJ_01328	3.73e-263	recF	-	-	L	ko:K03629	ko03440,map03440	ko00000,ko00001,ko03400	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
APKMJDPJ_01329	2.57e-60	-	-	-	S	-	-	-	COG NOG38282 non supervised orthologous group
APKMJDPJ_01330	7.56e-204	-	3.1.3.15	-	E	ko:K04486	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	COG COG1387 Histidinol phosphatase and related hydrolases of the PHP family
APKMJDPJ_01331	1.88e-88	fthC	6.3.3.2	-	H	ko:K01934	ko00670,ko01100,map00670,map01100	ko00000,ko00001,ko01000	Psort location Cytoplasmic, score 8.96
APKMJDPJ_01332	0.0	ctp	3.4.21.102	-	M	ko:K03797	-	ko00000,ko01000,ko01002	Belongs to the peptidase S41A family
APKMJDPJ_01333	7.65e-101	comEB	3.5.4.12	-	F	ko:K01493	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko02044	Cytidine and deoxycytidylate deaminase zinc-binding region
APKMJDPJ_01334	3.08e-123	-	-	-	S	-	-	-	COG NOG30732 non supervised orthologous group
APKMJDPJ_01335	0.0	dcp	3.4.15.5, 3.4.24.70	-	E	ko:K01284,ko:K01414	-	ko00000,ko01000,ko01002	Psort location Cytoplasmic, score
APKMJDPJ_01336	1.4e-237	gap	1.2.1.12	-	C	ko:K00134	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
APKMJDPJ_01337	8.47e-85	mscL	-	-	M	ko:K03282	-	ko00000,ko02000	Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
APKMJDPJ_01338	0.0	guaA	6.3.5.2	-	F	ko:K01951	ko00230,ko00983,ko01100,map00230,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko01002	Catalyzes the synthesis of GMP from XMP
APKMJDPJ_01339	0.0	-	-	-	S	ko:K21572	-	ko00000,ko02000	SusD family
APKMJDPJ_01340	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
APKMJDPJ_01341	0.0	-	-	-	S	ko:K21572	-	ko00000,ko02000	SusD family
APKMJDPJ_01342	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
APKMJDPJ_01343	1.84e-202	fabI	1.3.1.10, 1.3.1.9	-	I	ko:K00208	ko00061,ko00333,ko00780,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Enoyl- acyl-carrier-protein reductase NADH
APKMJDPJ_01344	1.59e-245	gldB	-	-	O	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_01345	3.41e-168	rsmI_1	2.1.1.198	-	H	ko:K07056	-	ko00000,ko01000,ko03009	Psort location Cytoplasmic, score 8.96
APKMJDPJ_01346	1.3e-264	-	-	-	I	-	-	-	Psort location CytoplasmicMembrane, score
APKMJDPJ_01347	5.16e-215	lipA	2.8.1.8	-	H	ko:K03644	ko00785,ko01100,map00785,map01100	ko00000,ko00001,ko01000	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
APKMJDPJ_01348	0.0	dpp	3.4.14.5	-	EU	ko:K01278	ko04974,map04974	ko00000,ko00001,ko01000,ko01002,ko04090,ko04147	Peptidase, S9A B C family, catalytic domain protein
APKMJDPJ_01349	6.87e-172	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
APKMJDPJ_01350	1.23e-193	-	-	-	KT	-	-	-	COG COG3279 Response regulator of the LytR AlgR family
APKMJDPJ_01351	4.49e-232	-	-	-	S	ko:K07139	-	ko00000	radical SAM protein, TIGR01212 family
APKMJDPJ_01352	8.04e-300	fprA	1.6.3.4	-	C	ko:K22405	-	ko00000,ko01000	anaerobic nitric oxide reductase flavorubredoxin
APKMJDPJ_01353	2.94e-196	nagB	3.5.99.6	-	G	ko:K02564	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
APKMJDPJ_01354	1.62e-66	-	-	-	-	-	-	-	-
APKMJDPJ_01355	2.96e-145	yciO	-	-	J	-	-	-	Belongs to the SUA5 family
APKMJDPJ_01356	0.0	-	-	-	M	ko:K07289	-	ko00000	protein involved in outer membrane biogenesis
APKMJDPJ_01357	0.0	-	-	-	L	-	-	-	COG0507 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member
APKMJDPJ_01358	1.69e-186	-	-	-	S	-	-	-	of the HAD superfamily
APKMJDPJ_01359	3.14e-299	patB	4.4.1.8	-	E	ko:K14155	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko01000,ko01007	COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities
APKMJDPJ_01360	4.65e-296	-	2.5.1.49	-	E	ko:K01740	ko00270,ko01100,map00270,map01100	ko00000,ko00001,ko01000	Cys/Met metabolism PLP-dependent enzyme
APKMJDPJ_01361	4.56e-130	-	-	-	K	-	-	-	Sigma-70, region 4
APKMJDPJ_01362	6e-268	-	-	-	PT	-	-	-	Sigma factor regulatory protein, FecR PupR family
APKMJDPJ_01364	9.72e-163	-	-	-	K	-	-	-	- catabolite gene activator and regulatory subunit of cAMP-dependent protein
APKMJDPJ_01365	7.16e-125	marC	-	-	U	ko:K05595	-	ko00000,ko02000	UPF0056 membrane protein
APKMJDPJ_01366	2.69e-156	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
APKMJDPJ_01367	0.0	-	-	-	G	-	-	-	glycogen debranching enzyme, archaeal type
APKMJDPJ_01368	0.0	gmhA	2.4.1.346	GT4	M	ko:K13668	-	ko00000,ko01000,ko01003	Glycosyltransferase, group 1 family protein
APKMJDPJ_01369	0.0	amyA	3.2.1.1	GH57	G	ko:K07405	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 57 family
APKMJDPJ_01370	0.0	-	-	-	S	-	-	-	Domain of unknown function (DUF4270)
APKMJDPJ_01371	3.1e-206	glgA	2.4.1.21	GT5	G	ko:K00703	ko00500,ko01100,ko01110,ko02026,map00500,map01100,map01110,map02026	ko00000,ko00001,ko00002,ko01000,ko01003	Starch synthase, catalytic domain
APKMJDPJ_01372	7.24e-203	panC	6.3.2.1	-	H	ko:K01918	ko00410,ko00770,ko01100,ko01110,map00410,map00770,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
APKMJDPJ_01373	2.92e-78	panD	4.1.1.11	-	H	ko:K01579	ko00410,ko00770,ko01100,ko01110,map00410,map00770,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
APKMJDPJ_01374	0.0	gltA	1.3.1.1, 1.4.1.13, 1.4.1.14	-	C	ko:K00266,ko:K17722	ko00240,ko00250,ko00410,ko00770,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00240,map00250,map00410,map00770,map00910,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Psort location Cytoplasmic, score 9.97
APKMJDPJ_01375	7.84e-284	gluP	-	-	G	ko:K02429	-	ko00000,ko02000	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_01376	4.26e-310	serS	6.1.1.11	-	J	ko:K01875	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Psort location Cytoplasmic, score
APKMJDPJ_01377	3.01e-58	rpmA	-	-	J	ko:K02899	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL27 family
APKMJDPJ_01378	5.77e-68	rplU	-	-	J	ko:K02888	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein binds to 23S rRNA in the presence of protein L20
APKMJDPJ_01379	1.41e-158	ppaX	3.1.3.18	-	V	ko:K01091	ko00630,ko01100,ko01110,ko01130,map00630,map01100,map01110,map01130	ko00000,ko00001,ko01000	HAD hydrolase, family IA, variant 1
APKMJDPJ_01380	1.71e-121	mepS	3.4.17.13	-	M	ko:K13694	-	ko00000,ko01000,ko01002,ko01011	NlpC P60 family
APKMJDPJ_01381	1.23e-166	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	COG1131 ABC-type multidrug transport system ATPase component
APKMJDPJ_01382	0.0	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_01383	0.0	-	-	-	S	ko:K07263	-	ko00000,ko01000,ko01002	Belongs to the peptidase M16 family
APKMJDPJ_01384	5.66e-188	kdsA	2.5.1.55	-	H	ko:K01627	ko00540,ko01100,map00540,map01100	ko00000,ko00001,ko00002,ko01000,ko01005	Belongs to the KdsA family
APKMJDPJ_01385	6.6e-228	-	-	-	I	-	-	-	lipid kinase, YegS Rv2252 BmrU family
APKMJDPJ_01386	7.93e-219	miaA2	2.5.1.75	-	F	ko:K00791	ko00908,ko01100,ko01110,map00908,map01100,map01110	ko00000,ko00001,ko01000,ko01006,ko03016	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
APKMJDPJ_01387	2.15e-280	-	-	-	V	-	-	-	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_01388	3.05e-152	-	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	COG1136 ABC-type antimicrobial peptide transport system ATPase component
APKMJDPJ_01389	0.0	-	-	-	S	-	-	-	COG NOG26882 non supervised orthologous group
APKMJDPJ_01390	3.17e-166	rsmE	2.1.1.193	-	J	ko:K09761	-	ko00000,ko01000,ko03009	Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
APKMJDPJ_01391	1.12e-128	-	-	-	S	ko:K08999	-	ko00000	Conserved protein
APKMJDPJ_01392	1.39e-301	nupG	-	-	G	ko:K03289,ko:K11537	-	ko00000,ko02000	transport of nucleosides, permease protein K03289
APKMJDPJ_01393	2.3e-276	-	-	-	S	-	-	-	6-bladed beta-propeller
APKMJDPJ_01394	1.74e-295	rlmI	2.1.1.191	-	J	ko:K06969	-	ko00000,ko01000,ko03009	SAM-dependent
APKMJDPJ_01395	4.86e-150	rnd	-	-	L	-	-	-	3'-5' exonuclease
APKMJDPJ_01396	1.18e-134	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_01397	0.0	ftsK	-	-	D	ko:K03466	-	ko00000,ko03036	COG1674 DNA segregation ATPase FtsK SpoIIIE and related
APKMJDPJ_01398	3.02e-150	lolA	-	-	M	ko:K03634	-	ko00000	COG NOG19151 non supervised orthologous group
APKMJDPJ_01399	5.04e-231	trxB	1.8.1.9	-	C	ko:K00384	ko00450,map00450	ko00000,ko00001,ko01000	Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
APKMJDPJ_01400	0.0	-	3.2.1.52	GH20	G	ko:K12373	ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142	ko00000,ko00001,ko00002,ko01000,ko03110	Glycosyl hydrolase family 20, catalytic domain
APKMJDPJ_01401	1.33e-160	-	-	-	K	ko:K21556	-	ko00000,ko03000	- catabolite gene activator and regulatory subunit of cAMP-dependent protein
APKMJDPJ_01402	0.0	glnA	6.3.1.2	-	S	ko:K01915	ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727	ko00000,ko00001,ko01000,ko04147	Glutamate--ammonia ligase, catalytic domain protein
APKMJDPJ_01403	0.0	-	-	-	S	-	-	-	COG NOG25960 non supervised orthologous group
APKMJDPJ_01404	2.19e-271	-	-	-	L	-	-	-	Reverse transcriptase (RNA-dependent DNA polymerase)
APKMJDPJ_01405	0.0	rpsA	-	-	J	ko:K02945	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence
APKMJDPJ_01406	7.38e-223	rnz	3.1.26.11	-	S	ko:K00784	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
APKMJDPJ_01407	4.81e-127	-	-	-	K	ko:K03088	-	ko00000,ko03021	Belongs to the sigma-70 factor family. ECF subfamily
APKMJDPJ_01408	1.64e-89	-	-	-	S	-	-	-	COG NOG23405 non supervised orthologous group
APKMJDPJ_01409	3.54e-105	-	-	-	S	-	-	-	COG NOG28735 non supervised orthologous group
APKMJDPJ_01410	2.5e-188	mazG	3.6.1.66	-	S	ko:K02428	ko00230,map00230	ko00000,ko00001,ko01000	Psort location Cytoplasmic, score 8.96
APKMJDPJ_01411	9.47e-262	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
APKMJDPJ_01412	0.0	valS	6.1.1.9	-	J	ko:K01873	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
APKMJDPJ_01413	0.0	-	-	-	T	-	-	-	ATPase histidine kinase DNA gyrase B HSP90 domain protein
APKMJDPJ_01414	4.1e-32	-	-	-	L	-	-	-	regulation of translation
APKMJDPJ_01415	2.02e-138	-	-	-	K	ko:K03088	-	ko00000,ko03021	RNA polymerase sigma-70 factor
APKMJDPJ_01416	6.25e-245	-	-	-	PT	-	-	-	Domain of unknown function (DUF4974)
APKMJDPJ_01417	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
APKMJDPJ_01418	0.0	-	-	-	H	-	-	-	Susd and RagB outer membrane lipoprotein
APKMJDPJ_01419	1.75e-256	-	-	-	S	-	-	-	Endonuclease Exonuclease phosphatase family
APKMJDPJ_01420	2.87e-274	-	-	-	S	-	-	-	Calcineurin-like phosphoesterase
APKMJDPJ_01421	3.91e-130	-	-	-	K	ko:K03088	-	ko00000,ko03021	RNA polymerase sigma-70 factor
APKMJDPJ_01422	3.08e-242	-	-	-	PT	-	-	-	Sigma factor regulatory protein, FecR PupR family
APKMJDPJ_01423	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
APKMJDPJ_01424	0.0	-	-	-	F	ko:K21572	-	ko00000,ko02000	SusD family
APKMJDPJ_01425	0.0	arsA	-	-	P	-	-	-	COG COG3119 Arylsulfatase A and related enzymes
APKMJDPJ_01426	0.0	-	-	-	P	-	-	-	Psort location Cytoplasmic, score
APKMJDPJ_01427	2.26e-99	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_01428	3.32e-264	-	-	-	S	-	-	-	COG NOG26558 non supervised orthologous group
APKMJDPJ_01429	0.0	secA	-	-	U	ko:K03070	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
APKMJDPJ_01430	0.0	pafA	-	-	P	-	-	-	type I phosphodiesterase nucleotide pyrophosphatase
APKMJDPJ_01431	1.98e-300	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
APKMJDPJ_01432	9.41e-175	coaX	2.7.1.33	-	F	ko:K03525	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
APKMJDPJ_01433	2.87e-308	-	-	-	I	-	-	-	Psort location OuterMembrane, score
APKMJDPJ_01434	1.89e-316	-	-	-	S	-	-	-	Tetratricopeptide repeat protein
APKMJDPJ_01435	5.11e-144	-	-	-	S	-	-	-	Lipopolysaccharide-assembly, LptC-related
APKMJDPJ_01436	1e-289	tlyC	-	-	S	ko:K03699	-	ko00000,ko02042	Psort location CytoplasmicMembrane, score
APKMJDPJ_01437	0.0	ppiD	5.2.1.8	-	O	ko:K01802,ko:K03770	-	ko00000,ko01000,ko03110	COG NOG26630 non supervised orthologous group
APKMJDPJ_01438	6.04e-249	rlmN	2.1.1.192	-	J	ko:K06941	-	ko00000,ko01000,ko03009	Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs
APKMJDPJ_01439	3.66e-252	-	-	-	L	-	-	-	COG NOG11654 non supervised orthologous group
APKMJDPJ_01440	1.25e-263	pdxA	1.1.1.262	-	C	ko:K00097	ko00750,ko01100,map00750,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the PdxA family
APKMJDPJ_01441	2.66e-289	fhlA	-	-	K	-	-	-	Sigma-54 interaction domain protein
APKMJDPJ_01442	1.15e-120	lptE	-	-	S	-	-	-	COG NOG14471 non supervised orthologous group
APKMJDPJ_01443	7.83e-162	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_01444	1.49e-64	secG	-	-	U	ko:K03075	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Preprotein translocase SecG subunit
APKMJDPJ_01445	0.0	-	-	-	G	-	-	-	Transporter, major facilitator family protein
APKMJDPJ_01446	6.14e-80	pqqD	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_01447	1.04e-248	-	-	-	S	-	-	-	COG NOG25792 non supervised orthologous group
APKMJDPJ_01448	0.0	nnrD	4.2.1.136, 5.1.99.6	-	H	ko:K17758,ko:K17759	-	ko00000,ko01000	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
APKMJDPJ_01449	1.23e-311	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_01450	8.16e-160	-	-	-	Q	-	-	-	ubiE/COQ5 methyltransferase family
APKMJDPJ_01451	7.22e-119	-	-	-	K	-	-	-	Transcription termination factor nusG
APKMJDPJ_01452	1.67e-23	-	-	-	S	-	-	-	UpxZ family of transcription anti-terminator antagonists
APKMJDPJ_01453	7.31e-214	rfbA	2.7.7.24	-	H	ko:K00973	ko00521,ko00523,ko00525,ko01130,map00521,map00523,map00525,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
APKMJDPJ_01454	5.03e-133	rfbC	5.1.3.13	-	G	ko:K01790	ko00521,ko00523,ko01130,map00521,map00523,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
APKMJDPJ_01455	2.83e-121	-	-	-	S	-	-	-	Psort location Cytoplasmic, score
APKMJDPJ_01456	0.0	-	-	-	V	-	-	-	Mate efflux family protein
APKMJDPJ_01457	3.64e-219	-	-	-	H	-	-	-	Glycosyl transferase family 11
APKMJDPJ_01458	4.18e-284	-	-	-	M	-	-	-	Glycosyl transferases group 1
APKMJDPJ_01459	4.69e-158	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 9.26
APKMJDPJ_01461	1.92e-207	-	-	-	S	-	-	-	Glycosyl transferase family 2
APKMJDPJ_01462	1.61e-310	wbpO	1.1.1.136	-	M	ko:K02474,ko:K13015	ko00520,map00520	ko00000,ko00001,ko01000,ko01005	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
APKMJDPJ_01463	3.19e-288	wcfG	-	-	M	-	-	-	Glycosyl transferases group 1
APKMJDPJ_01464	1.52e-197	-	-	-	G	-	-	-	Polysaccharide deacetylase
APKMJDPJ_01465	1.4e-303	-	-	-	M	-	-	-	Glycosyltransferase, group 1 family protein
APKMJDPJ_01466	3.03e-181	-	-	-	M	-	-	-	Glycosyltransferase, group 2 family protein
APKMJDPJ_01467	2.47e-250	-	-	-	GM	-	-	-	NAD dependent epimerase dehydratase family
APKMJDPJ_01468	6.55e-224	wcgX	2.7.8.33, 2.7.8.35	-	M	ko:K02851	-	ko00000,ko01000,ko01003,ko01005	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_01469	0.0	-	-	-	S	-	-	-	PepSY-associated TM region
APKMJDPJ_01470	1.84e-153	-	-	-	S	-	-	-	HmuY protein
APKMJDPJ_01471	0.0	-	-	-	P	ko:K16089	-	ko00000,ko02000	COG4771 Outer membrane receptor for ferrienterochelin and colicins
APKMJDPJ_01472	3.54e-122	hpt	2.4.2.8	-	F	ko:K00760	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the purine pyrimidine phosphoribosyltransferase family
APKMJDPJ_01473	7.06e-132	adk	2.7.4.3	-	F	ko:K00939	ko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
APKMJDPJ_01474	4.57e-269	obg	-	-	S	ko:K03979	-	ko00000,ko01000,ko03009	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
APKMJDPJ_01475	4.53e-200	-	-	-	S	ko:K05810	-	ko00000,ko01000	Belongs to the multicopper oxidase YfiH RL5 family
APKMJDPJ_01476	2.31e-155	-	-	-	S	-	-	-	B3 4 domain protein
APKMJDPJ_01477	5.67e-176	nlpD_2	-	-	M	-	-	-	COG COG0739 Membrane proteins related to metalloendopeptidases
APKMJDPJ_01478	8.28e-295	-	-	-	M	-	-	-	Phosphate-selective porin O and P
APKMJDPJ_01479	1.7e-282	pgl	3.1.1.31	-	G	ko:K07404	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	COG2706 3-carboxymuconate cyclase
APKMJDPJ_01481	4.88e-85	-	-	-	-	-	-	-	-
APKMJDPJ_01482	0.0	-	-	-	T	-	-	-	Two component regulator propeller
APKMJDPJ_01483	5.06e-86	-	-	-	K	-	-	-	cheY-homologous receiver domain
APKMJDPJ_01484	8.66e-254	dinB	2.7.7.7	-	L	ko:K02346	-	ko00000,ko01000,ko03400	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
APKMJDPJ_01485	1.01e-99	-	-	-	-	-	-	-	-
APKMJDPJ_01486	0.0	-	-	-	E	-	-	-	Transglutaminase-like protein
APKMJDPJ_01487	0.0	-	-	-	S	-	-	-	Short chain fatty acid transporter
APKMJDPJ_01488	3.36e-22	-	-	-	-	-	-	-	-
APKMJDPJ_01489	6.53e-08	-	-	-	-	-	-	-	-
APKMJDPJ_01490	4.9e-94	-	-	-	S	-	-	-	COG NOG30410 non supervised orthologous group
APKMJDPJ_01491	2.6e-278	madB	4.1.1.3	-	C	ko:K01572	ko00620,ko01100,map00620,map01100	ko00000,ko00001,ko01000,ko02000	COG COG1883 Na -transporting methylmalonyl-CoA oxaloacetate decarboxylase, beta subunit
APKMJDPJ_01492	0.0	-	-	-	C	-	-	-	Shikimate dehydrogenase substrate binding domain
APKMJDPJ_01493	3.34e-211	rhaR_1	-	-	K	-	-	-	transcriptional regulator (AraC family)
APKMJDPJ_01495	0.0	-	-	-	U	-	-	-	Involved in the tonB-independent uptake of proteins
APKMJDPJ_01496	5.37e-218	-	-	-	K	ko:K03827	-	ko00000,ko01000	Acetyltransferase, gnat family
APKMJDPJ_01497	0.0	rluA	5.4.99.28, 5.4.99.29	-	J	ko:K06177	-	ko00000,ko01000,ko03009,ko03016	Pseudouridine synthase, RluA family
APKMJDPJ_01498	0.0	-	3.1.21.5	-	V	ko:K01156	-	ko00000,ko01000,ko02048	to Salmonella typhimurium type III restriction-modification system Stylti enzyme Res or STM0358 SWALL T3RE_SALTY (SWALL P40815) (990 aa) fasta scores E()
APKMJDPJ_01499	0.0	-	2.1.1.72	-	L	ko:K07316	-	ko00000,ko01000,ko02048	DNA methylase
APKMJDPJ_01500	0.0	-	-	-	G	-	-	-	Belongs to the glycosyl hydrolase 31 family
APKMJDPJ_01501	1.73e-216	-	-	-	IQ	-	-	-	Oxidoreductase, short chain dehydrogenase reductase family protein
APKMJDPJ_01502	0.0	-	-	-	S	ko:K07133	-	ko00000	ATPase (AAA superfamily)
APKMJDPJ_01503	2.63e-150	-	-	-	-	-	-	-	-
APKMJDPJ_01504	0.0	-	-	-	S	-	-	-	Protein of unknown function (DUF1524)
APKMJDPJ_01505	2.83e-66	-	-	-	-	-	-	-	-
APKMJDPJ_01506	4.09e-147	-	-	-	S	-	-	-	Calcineurin-like phosphoesterase superfamily domain
APKMJDPJ_01507	7.23e-194	-	-	-	S	-	-	-	Calcineurin-like phosphoesterase
APKMJDPJ_01508	0.0	-	-	-	-	-	-	-	-
APKMJDPJ_01509	2.28e-60	-	-	-	K	-	-	-	DNA-binding helix-turn-helix protein
APKMJDPJ_01510	3.77e-315	-	2.7.11.1	-	S	ko:K07154	-	ko00000,ko01000,ko01001,ko02048	Pfam:HipA_N
APKMJDPJ_01511	1.75e-43	-	-	-	K	-	-	-	DNA-binding helix-turn-helix protein
APKMJDPJ_01512	0.0	-	2.1.1.72	-	V	ko:K03427	-	ko00000,ko01000,ko02048	COG0286 Type I restriction-modification system methyltransferase subunit
APKMJDPJ_01513	3.62e-289	-	3.1.21.3	-	L	ko:K01154	-	ko00000,ko01000,ko02048	Type I restriction modification DNA specificity domain
APKMJDPJ_01514	0.0	hsdR	3.1.21.3	-	V	ko:K01153	-	ko00000,ko01000,ko02048	Subunit R is required for both nuclease and ATPase activities, but not for modification
APKMJDPJ_01515	6.4e-174	-	-	-	S	ko:K07043	-	ko00000	Protein of unknown function DUF45
APKMJDPJ_01516	0.0	-	-	-	S	-	-	-	Bacteriophage abortive infection AbiH
APKMJDPJ_01517	4.2e-06	-	-	-	S	-	-	-	COG3943 Virulence protein
APKMJDPJ_01519	9.78e-112	-	-	-	I	-	-	-	PLD-like domain
APKMJDPJ_01520	1.33e-71	-	-	-	-	-	-	-	-
APKMJDPJ_01521	5.82e-160	-	3.6.4.12	-	K	ko:K03655	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Putative ATP-dependent DNA helicase recG C-terminal
APKMJDPJ_01522	6.06e-24	-	-	-	S	-	-	-	Nucleotidyl transferase AbiEii toxin, Type IV TA system
APKMJDPJ_01523	2.4e-171	-	-	-	-	-	-	-	-
APKMJDPJ_01524	8.55e-49	-	-	-	-	-	-	-	-
APKMJDPJ_01525	0.0	-	-	-	S	ko:K07133	-	ko00000	Domain of unknown function (DUF4143)
APKMJDPJ_01526	4.61e-44	-	-	-	-	-	-	-	-
APKMJDPJ_01528	2.64e-286	-	-	-	S	ko:K06926	-	ko00000	AAA domain, putative AbiEii toxin, Type IV TA system
APKMJDPJ_01529	3.49e-133	-	-	-	S	-	-	-	RloB-like protein
APKMJDPJ_01530	0.0	-	-	-	L	ko:K07459	-	ko00000	Protein of unknown function (DUF2813)
APKMJDPJ_01531	0.0	-	-	-	L	-	-	-	COG COG0210 Superfamily I DNA and RNA helicases
APKMJDPJ_01532	0.0	-	-	-	-	-	-	-	-
APKMJDPJ_01533	9.4e-48	-	-	-	S	-	-	-	Calcineurin-like phosphoesterase
APKMJDPJ_01534	3.56e-234	-	-	-	S	-	-	-	Metallo-beta-lactamase superfamily
APKMJDPJ_01535	0.0	-	-	-	T	-	-	-	NACHT domain
APKMJDPJ_01536	8.24e-82	-	-	-	T	-	-	-	Tetratricopeptide repeat
APKMJDPJ_01537	8.8e-195	-	-	-	S	-	-	-	Calcineurin-like phosphoesterase
APKMJDPJ_01538	4.3e-124	-	-	-	-	-	-	-	-
APKMJDPJ_01539	1.32e-147	-	-	-	S	-	-	-	Calcineurin-like phosphoesterase superfamily domain
APKMJDPJ_01540	1.12e-43	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
APKMJDPJ_01541	0.0	-	-	-	L	-	-	-	domain protein
APKMJDPJ_01542	8.49e-184	-	-	-	S	-	-	-	Abortive infection C-terminus
APKMJDPJ_01543	1.1e-156	-	-	-	S	-	-	-	Domain of unknown function (DUF4391)
APKMJDPJ_01544	0.0	-	2.1.1.72	-	L	ko:K07316	-	ko00000,ko01000,ko02048	COG2189 Adenine specific DNA methylase Mod
APKMJDPJ_01545	1.71e-238	-	-	-	S	-	-	-	COG3943 Virulence protein
APKMJDPJ_01546	0.0	-	3.1.21.5	-	V	ko:K01156	-	ko00000,ko01000,ko02048	to Salmonella typhimurium type III restriction-modification system Stylti enzyme Res or STM0358 SWALL T3RE_SALTY (SWALL P40815) (990 aa) fasta scores E()
APKMJDPJ_01547	0.0	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_01548	0.0	-	-	-	L	-	-	-	Protein of unknown function (DUF2726)
APKMJDPJ_01549	4.46e-147	-	-	-	-	-	-	-	-
APKMJDPJ_01550	9.67e-250	-	-	-	S	-	-	-	COG3943 Virulence protein
APKMJDPJ_01551	1.33e-111	-	-	-	-	-	-	-	-
APKMJDPJ_01552	1.7e-303	-	-	-	-	-	-	-	-
APKMJDPJ_01553	5.06e-94	-	-	-	-	-	-	-	-
APKMJDPJ_01554	1.96e-251	-	-	-	T	-	-	-	COG NOG25714 non supervised orthologous group
APKMJDPJ_01555	1.65e-85	-	-	-	K	-	-	-	COG NOG37763 non supervised orthologous group
APKMJDPJ_01556	3.82e-196	-	-	-	S	-	-	-	COG NOG31621 non supervised orthologous group
APKMJDPJ_01557	7.92e-270	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
APKMJDPJ_01558	1.71e-206	-	-	-	L	-	-	-	DNA binding domain, excisionase family
APKMJDPJ_01559	0.0	mnmE	-	-	S	ko:K03650	-	ko00000,ko01000,ko03016	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
APKMJDPJ_01560	0.0	-	-	-	T	-	-	-	Histidine kinase
APKMJDPJ_01561	5.27e-154	-	-	-	S	ko:K07118	-	ko00000	NmrA-like family
APKMJDPJ_01562	6.67e-130	-	2.7.7.7	-	L	ko:K02342	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	3' exoribonuclease, RNase T-like
APKMJDPJ_01563	6.03e-216	udp	2.4.2.3	-	F	ko:K00757	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	Psort location Cytoplasmic, score
APKMJDPJ_01564	5.05e-215	-	-	-	S	-	-	-	UPF0365 protein
APKMJDPJ_01565	1.61e-96	-	-	-	O	-	-	-	Psort location CytoplasmicMembrane, score
APKMJDPJ_01566	0.0	-	-	-	S	-	-	-	COG NOG11656 non supervised orthologous group
APKMJDPJ_01567	5.9e-181	ttcA	-	-	H	ko:K14058	-	ko00000,ko03016	Belongs to the TtcA family
APKMJDPJ_01568	5.57e-83	-	-	-	S	ko:K09922	-	ko00000	Psort location CytoplasmicMembrane, score
APKMJDPJ_01569	3.45e-247	apbE	2.7.1.180	-	H	ko:K03734	-	ko00000,ko01000	Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
APKMJDPJ_01570	5.98e-131	mntP	-	-	P	-	-	-	Probably functions as a manganese efflux pump
APKMJDPJ_01571	3.26e-174	-	-	-	S	-	-	-	COG NOG28307 non supervised orthologous group
APKMJDPJ_01572	2.32e-121	-	-	-	S	-	-	-	COG NOG30522 non supervised orthologous group
APKMJDPJ_01573	2.5e-232	arnC	-	-	M	-	-	-	involved in cell wall biogenesis
APKMJDPJ_01574	1.19e-107	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
APKMJDPJ_01577	1.81e-309	eno	4.2.1.11	-	G	ko:K01689	ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066	ko00000,ko00001,ko00002,ko01000,ko03019,ko04147	Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
APKMJDPJ_01578	1.77e-134	-	-	-	S	-	-	-	Pentapeptide repeat protein
APKMJDPJ_01579	1.45e-85	crcB	-	-	D	ko:K06199	-	ko00000,ko02000	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
APKMJDPJ_01580	0.0	susB	3.2.1.20, 3.2.1.3	GH31,GH97	G	ko:K01187,ko:K21574	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	COG NOG06228 non supervised orthologous group
APKMJDPJ_01581	5.88e-75	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
APKMJDPJ_01583	1.05e-282	-	-	-	-	-	-	-	-
APKMJDPJ_01584	2.95e-206	nadK	2.7.1.23	-	H	ko:K00858	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
APKMJDPJ_01585	4.48e-170	pdxJ	2.6.99.2	-	H	ko:K03474	ko00750,ko01100,map00750,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
APKMJDPJ_01586	1.6e-160	exbB	-	-	U	ko:K03561	-	ko00000,ko02000	MotA TolQ ExbB proton channel family
APKMJDPJ_01587	2.17e-92	-	-	-	U	ko:K03559	-	ko00000,ko02000	Transport energizing protein, ExbD TolR family
APKMJDPJ_01588	1.14e-150	-	-	-	M	-	-	-	TonB family domain protein
APKMJDPJ_01589	1.05e-130	yajL	3.5.1.124	-	S	ko:K03152	-	ko00000,ko01000,ko01002	Psort location Cytoplasmic, score
APKMJDPJ_01590	1.63e-154	ispD	2.7.7.60	-	I	ko:K00991	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP)
APKMJDPJ_01591	0.0	recG	3.6.4.12	-	L	ko:K03655	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
APKMJDPJ_01592	1.9e-105	ndk	2.7.4.6	-	F	ko:K00940	ko00230,ko00240,ko00983,ko01100,ko01110,ko01130,ko04016,map00230,map00240,map00983,map01100,map01110,map01130,map04016	ko00000,ko00001,ko00002,ko01000,ko04131	Nucleoside diphosphate kinase
APKMJDPJ_01593	7.3e-213	mepM_1	-	-	M	-	-	-	Peptidase, M23
APKMJDPJ_01594	3.53e-123	-	-	-	S	-	-	-	COG NOG27206 non supervised orthologous group
APKMJDPJ_01595	4.18e-305	doxX	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
APKMJDPJ_01596	1.49e-175	tpiA	5.3.1.1	-	G	ko:K01803	ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
APKMJDPJ_01597	3.6e-101	-	-	-	S	-	-	-	Sporulation and cell division repeat protein
APKMJDPJ_01598	7.9e-136	folE	3.5.4.16	-	F	ko:K01495	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	GTP cyclohydrolase I
APKMJDPJ_01599	1.94e-135	-	-	-	K	ko:K03088	-	ko00000,ko03021	RNA polymerase sigma-70 factor, Bacteroides expansion family 1
APKMJDPJ_01600	3.37e-222	-	-	-	PT	-	-	-	COG3712 Fe2 -dicitrate sensor, membrane component
APKMJDPJ_01601	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
APKMJDPJ_01602	0.0	-	-	-	S	ko:K21572	-	ko00000,ko02000	COG NOG28394 non supervised orthologous group
APKMJDPJ_01603	0.0	-	-	-	P	-	-	-	Type I phosphodiesterase / nucleotide pyrophosphatase
APKMJDPJ_01604	0.0	-	-	-	P	-	-	-	Type I phosphodiesterase / nucleotide pyrophosphatase
APKMJDPJ_01605	0.0	dnaG	-	-	L	ko:K02316	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
APKMJDPJ_01607	3.14e-180	tyrA	1.3.1.12	-	E	ko:K00210	ko00400,ko00401,ko01100,ko01110,ko01130,ko01230,map00400,map00401,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	prephenate dehydrogenase
APKMJDPJ_01608	1.83e-259	pheB	5.4.99.5	-	E	ko:K04516	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Psort location Cytoplasmic, score 8.96
APKMJDPJ_01609	2.12e-297	dapL	2.6.1.83	-	E	ko:K10206,ko:K14261	ko00300,ko01100,ko01110,ko01130,ko01230,map00300,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	COG0436 Aspartate tyrosine aromatic aminotransferase
APKMJDPJ_01610	1.13e-202	pheA	4.2.1.51	-	E	ko:K04518	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Psort location Cytoplasmic, score
APKMJDPJ_01611	4.46e-167	-	-	-	K	-	-	-	Transcriptional regulator, GntR family
APKMJDPJ_01612	1e-219	-	4.1.3.3, 4.2.1.41, 4.3.3.7	-	EM	ko:K01639,ko:K01707,ko:K01714	ko00053,ko00261,ko00300,ko00520,ko01100,ko01110,ko01120,ko01130,ko01230,map00053,map00261,map00300,map00520,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the DapA family
APKMJDPJ_01613	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
APKMJDPJ_01614	0.0	-	-	-	S	ko:K21572	-	ko00000,ko02000	Pfam:SusD
APKMJDPJ_01615	3.66e-289	-	-	-	G	-	-	-	BNR repeat-like domain
APKMJDPJ_01616	0.0	nanH	3.2.1.18	GH33	G	ko:K01186	ko00511,ko00600,ko04142,map00511,map00600,map04142	ko00000,ko00001,ko01000,ko02042	BNR Asp-box repeat protein
APKMJDPJ_01617	1.84e-302	-	-	-	G	ko:K08191	-	ko00000,ko02000	Transporter, major facilitator family protein
APKMJDPJ_01618	1.08e-135	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_01619	0.0	recQ2	3.6.4.12	-	L	ko:K03654	ko03018,map03018	ko00000,ko00001,ko01000,ko03400	ATP-dependent DNA helicase RecQ
APKMJDPJ_01620	0.0	recJ	-	-	L	ko:K07462	ko03410,ko03430,ko03440,map03410,map03430,map03440	ko00000,ko00001,ko01000,ko03400	single-stranded-DNA-specific exonuclease recJ
APKMJDPJ_01621	1.27e-139	tag	3.2.2.20	-	L	ko:K01246	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	COG COG2818 3-methyladenine DNA glycosylase
APKMJDPJ_01622	3.71e-198	-	-	-	L	-	-	-	COG NOG19076 non supervised orthologous group
APKMJDPJ_01623	1.71e-59	-	-	-	S	-	-	-	WYL_2, Sm-like SH3 beta-barrel fold
APKMJDPJ_01624	4.57e-122	-	-	-	K	-	-	-	KOW (Kyprides, Ouzounis, Woese) motif.
APKMJDPJ_01625	2.38e-114	-	-	-	S	-	-	-	UpxZ family of transcription anti-terminator antagonists
APKMJDPJ_01626	5.12e-156	-	-	-	C	-	-	-	glycerophosphoryl diester phosphodiesterase
APKMJDPJ_01627	1.7e-147	-	-	-	S	-	-	-	Haloacid dehalogenase-like hydrolase
APKMJDPJ_01628	6.88e-170	-	-	-	JM	-	-	-	Nucleotidyl transferase
APKMJDPJ_01629	4.86e-177	-	-	-	M	-	-	-	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
APKMJDPJ_01630	3.17e-75	-	-	-	S	-	-	-	Cupin 2, conserved barrel domain protein
APKMJDPJ_01631	0.0	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_01632	6.03e-216	epsH	-	-	V	-	-	-	Glycosyl transferase, family 2
APKMJDPJ_01633	1.06e-154	-	-	-	S	-	-	-	Bacterial transferase hexapeptide (six repeats)
APKMJDPJ_01634	2.64e-243	-	-	-	S	-	-	-	Glycosyltransferase family 10 (fucosyltransferase) C-term
APKMJDPJ_01635	3.59e-214	-	-	-	H	-	-	-	Glycosyltransferase, family 11
APKMJDPJ_01636	1.51e-234	-	-	-	S	-	-	-	group 2 family protein
APKMJDPJ_01637	2e-242	-	-	-	S	-	-	-	EpsG family
APKMJDPJ_01638	3.18e-199	-	-	-	M	-	-	-	Glycosyltransferase like family 2
APKMJDPJ_01639	4.68e-183	-	-	-	M	-	-	-	Glycosyltransferase like family 2
APKMJDPJ_01640	2.11e-219	-	5.1.3.26	-	M	ko:K19997	-	ko00000,ko01000	to Edwardsiella ictaluri UDP-glucose 4-epimerase WbeIT SWALL Q937X6 (EMBL AY057452) (323 aa) fasta scores E()
APKMJDPJ_01641	6.02e-219	wcgX	2.7.8.33, 2.7.8.35	-	M	ko:K02851	-	ko00000,ko01000,ko01003,ko01005	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_01642	7.64e-52	-	-	-	M	-	-	-	N-acetylmuramidase
APKMJDPJ_01643	3.81e-70	-	-	-	M	-	-	-	N-acetylmuramidase
APKMJDPJ_01644	2.14e-106	-	-	-	L	-	-	-	DNA-binding protein
APKMJDPJ_01645	0.0	-	-	-	S	-	-	-	Domain of unknown function (DUF4114)
APKMJDPJ_01646	2.12e-102	-	-	-	S	ko:K07107	-	ko00000,ko01000	acyl-CoA thioester hydrolase, YbgC YbaW family
APKMJDPJ_01647	2.49e-119	rimN	2.7.7.87	-	J	ko:K07566	-	ko00000,ko01000,ko03009,ko03016	Belongs to the SUA5 family
APKMJDPJ_01648	0.0	clcB	-	-	P	ko:K03281	-	ko00000	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_01649	3.92e-230	fmt	2.1.2.9	-	J	ko:K00604	ko00670,ko00970,map00670,map00970	ko00000,ko00001,ko01000	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
APKMJDPJ_01650	3.42e-150	rpe	5.1.3.1	-	G	ko:K01783	ko00030,ko00040,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Psort location Cytoplasmic, score 8.96
APKMJDPJ_01651	0.0	comEC	-	-	S	ko:K02238	-	ko00000,ko00002,ko02044	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_01652	1.28e-254	nrnA	3.1.13.3, 3.1.3.7	-	S	ko:K06881	ko00920,ko01100,ko01120,map00920,map01100,map01120	ko00000,ko00001,ko01000,ko03400	DHH family
APKMJDPJ_01653	5.5e-155	-	-	-	S	-	-	-	COG NOG30041 non supervised orthologous group
APKMJDPJ_01654	0.0	glmM	5.4.2.8	-	G	ko:K01840	ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Psort location Cytoplasmic, score 8.96
APKMJDPJ_01655	0.0	-	3.2.1.23	-	G	ko:K12308	ko00052,map00052	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 35 family
APKMJDPJ_01656	4.6e-292	-	-	-	S	-	-	-	Domain of unknown function (DUF4934)
APKMJDPJ_01657	7.22e-283	hydF	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_01658	0.0	hydG	4.1.99.19	-	C	ko:K03150	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000	Iron-only hydrogenase maturation rSAM protein HydG
APKMJDPJ_01659	1.29e-163	hydE	2.8.1.6	-	C	ko:K01012	ko00780,ko01100,map00780,map01100	ko00000,ko00001,ko00002,ko01000	Iron-only hydrogenase maturation rSAM protein HydE
APKMJDPJ_01660	0.0	-	-	-	C	-	-	-	4Fe-4S binding domain protein
APKMJDPJ_01661	1.97e-184	-	-	-	K	ko:K02477	-	ko00000,ko02022	LytTr DNA-binding domain protein
APKMJDPJ_01662	3.87e-247	-	-	-	T	-	-	-	Histidine kinase
APKMJDPJ_01663	7.73e-200	-	-	-	M	ko:K15727	-	ko00000,ko02000	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
APKMJDPJ_01664	0.0	czcA	-	-	P	ko:K15726	-	ko00000,ko02000	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
APKMJDPJ_01665	0.0	-	-	-	G	-	-	-	Glycosyl hydrolase family 92
APKMJDPJ_01666	1.38e-120	bsaA	1.11.1.9	-	O	ko:K00432	ko00480,ko00590,ko04918,map00480,map00590,map04918	ko00000,ko00001,ko01000	Belongs to the glutathione peroxidase family
APKMJDPJ_01667	2.41e-128	idi	-	-	I	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_01668	3.45e-307	queA	2.4.99.17	-	H	ko:K07568	-	ko00000,ko01000,ko03016	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
APKMJDPJ_01669	3.57e-239	-	-	-	L	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_01670	1.06e-23	-	-	-	S	-	-	-	ATPase (AAA superfamily)
APKMJDPJ_01671	5.11e-36	-	-	-	L	-	-	-	COG NOG19076 non supervised orthologous group
APKMJDPJ_01672	2.8e-94	-	-	-	L	-	-	-	COG NOG19076 non supervised orthologous group
APKMJDPJ_01673	2.57e-133	-	-	-	S	-	-	-	Putative prokaryotic signal transducing protein
APKMJDPJ_01674	1.86e-28	-	5.1.3.26	-	M	ko:K19997	-	ko00000,ko01000	to Edwardsiella ictaluri UDP-glucose 4-epimerase WbeIT SWALL Q937X6 (EMBL AY057452) (323 aa) fasta scores E()
APKMJDPJ_01675	1.68e-25	-	5.1.3.26	-	M	ko:K19997	-	ko00000,ko01000	to Edwardsiella ictaluri UDP-glucose 4-epimerase WbeIT SWALL Q937X6 (EMBL AY057452) (323 aa) fasta scores E()
APKMJDPJ_01676	3.11e-222	wcgX	2.7.8.33, 2.7.8.35	-	M	ko:K02851	-	ko00000,ko01000,ko01003,ko01005	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_01677	2.11e-272	-	-	-	S	-	-	-	ATPase (AAA superfamily)
APKMJDPJ_01678	5.68e-76	-	-	-	S	-	-	-	COG NOG30654 non supervised orthologous group
APKMJDPJ_01679	2.52e-135	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
APKMJDPJ_01680	8.69e-54	-	-	-	S	-	-	-	COG NOG18433 non supervised orthologous group
APKMJDPJ_01681	1.01e-256	-	-	-	S	-	-	-	COG NOG27441 non supervised orthologous group
APKMJDPJ_01682	0.0	-	-	-	P	-	-	-	TonB-dependent receptor
APKMJDPJ_01683	6.4e-202	-	-	-	PT	-	-	-	Domain of unknown function (DUF4974)
APKMJDPJ_01684	1.67e-95	-	-	-	-	-	-	-	-
APKMJDPJ_01685	6.03e-122	-	-	-	K	ko:K03088	-	ko00000,ko03021	RNA polymerase sigma-70 factor
APKMJDPJ_01686	7.51e-287	hemN	-	-	H	-	-	-	Involved in the biosynthesis of porphyrin-containing compound
APKMJDPJ_01687	0.0	fusA2	-	-	J	ko:K02355	-	ko00000,ko03012,ko03029	Psort location Cytoplasmic, score 9.26
APKMJDPJ_01688	0.0	rprX	2.7.13.3	-	T	ko:K07636	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	two-component regulatory system, sensor kinase protein
APKMJDPJ_01689	8.31e-167	rprY	-	-	K	-	-	-	COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
APKMJDPJ_01690	1.1e-26	-	-	-	-	-	-	-	-
APKMJDPJ_01691	7.88e-100	ohrR	-	-	K	-	-	-	Transcriptional regulator, MarR family
APKMJDPJ_01692	1.26e-73	rpsF	-	-	J	ko:K02990	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Binds together with S18 to 16S ribosomal RNA
APKMJDPJ_01693	3.12e-56	rpsR	-	-	J	ko:K02963	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
APKMJDPJ_01694	1.26e-91	rplI	-	-	J	ko:K02939	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	binds to the 23S rRNA
APKMJDPJ_01695	5.93e-19	-	-	-	S	-	-	-	COG NOG38865 non supervised orthologous group
APKMJDPJ_01696	0.0	-	6.2.1.3	-	I	ko:K01897	ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920	ko00000,ko00001,ko00002,ko01000,ko01004,ko04147	Psort location CytoplasmicMembrane, score 9.82
APKMJDPJ_01697	0.0	yqeV	2.8.4.5	-	J	ko:K18707	-	ko00000,ko01000,ko03016	Psort location Cytoplasmic, score 8.96
APKMJDPJ_01698	4.44e-221	waaM	2.3.1.241	-	M	ko:K02517	ko00540,ko01100,map00540,map01100	ko00000,ko00001,ko00002,ko01000,ko01005	Lipid A biosynthesis (KDO)2-(Lauroyl)-lipid IVA acyltransferase
APKMJDPJ_01699	5.21e-254	-	-	-	S	ko:K07011	-	ko00000	Glycosyl transferase family group 2
APKMJDPJ_01700	1.16e-124	mgsA	4.2.3.3	-	G	ko:K01734	ko00640,ko01120,map00640,map01120	ko00000,ko00001,ko01000	methylglyoxal synthase
APKMJDPJ_01702	0.0	-	-	-	CO	-	-	-	Thioredoxin-like
APKMJDPJ_01703	6.51e-82	folB	1.13.11.81, 4.1.2.25, 5.1.99.8	-	H	ko:K01633	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
APKMJDPJ_01704	5.81e-248	-	-	-	G	-	-	-	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_01705	0.0	malQ	2.4.1.25	GH77	G	ko:K00705	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	Psort location Cytoplasmic, score 9.26
APKMJDPJ_01706	0.0	nrd	1.17.4.1	-	F	ko:K00525	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen
APKMJDPJ_01707	1.31e-177	-	1.5.1.38, 1.5.1.39	-	C	ko:K19285,ko:K19286	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	Nitroreductase family
APKMJDPJ_01708	0.0	dnaA	-	-	L	ko:K02313	ko02020,ko04112,map02020,map04112	ko00000,ko00001,ko03032,ko03036	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
APKMJDPJ_01709	5.14e-167	-	-	-	Q	ko:K02067	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component
APKMJDPJ_01710	1.09e-291	amiA	3.5.1.28	-	M	ko:K01448	ko01503,map01503	ko00000,ko00001,ko00002,ko01000,ko01011,ko03036	N-acetylmuramoyl-L-alanine amidase
APKMJDPJ_01711	1.31e-212	-	-	-	S	ko:K03453	-	ko00000	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_01712	1.58e-114	-	-	-	E	-	-	-	Acetyltransferase (GNAT) domain
APKMJDPJ_01714	0.0	-	3.2.1.52	GH20	G	ko:K12373	ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142	ko00000,ko00001,ko00002,ko01000,ko03110	Glycosyl hydrolase family 20, catalytic domain
APKMJDPJ_01715	3.7e-133	-	-	-	H	ko:K06950	-	ko00000	Psort location Cytoplasmic, score 8.96
APKMJDPJ_01716	0.0	-	-	-	M	-	-	-	Psort location OuterMembrane, score 9.49
APKMJDPJ_01717	2.62e-165	ung	3.2.2.27	-	L	ko:K03648	ko03410,ko05340,map03410,map05340	ko00000,ko00001,ko01000,ko03400	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
APKMJDPJ_01718	5.44e-257	asnA	6.3.1.1	-	E	ko:K01914	ko00250,ko00460,ko01100,ko01110,ko01230,map00250,map00460,map01100,map01110,map01230	ko00000,ko00001,ko01000	Psort location Cytoplasmic, score 10.00
APKMJDPJ_01720	8.31e-162	yfbT	-	-	S	-	-	-	HAD hydrolase, family IA, variant 3
APKMJDPJ_01721	5.75e-114	-	-	-	S	-	-	-	Domain of unknown function (DUF5035)
APKMJDPJ_01722	0.0	pgi	5.3.1.9	-	G	ko:K01810	ko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the GPI family
APKMJDPJ_01723	7.55e-241	gpsA	1.1.1.94	-	I	ko:K00057	ko00564,ko01110,map00564,map01110	ko00000,ko00001,ko01000	Glycerol-3-phosphate dehydrogenase
APKMJDPJ_01724	0.0	lysS	6.1.1.6	-	J	ko:K04567	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-II aminoacyl-tRNA synthetase family
APKMJDPJ_01725	0.0	-	-	-	V	-	-	-	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_01726	0.0	-	-	-	M	ko:K07001	-	ko00000	Phospholipase, patatin family
APKMJDPJ_01727	2.02e-107	-	-	-	L	-	-	-	Bacterial DNA-binding protein
APKMJDPJ_01728	4.43e-135	-	-	-	T	-	-	-	- catabolite gene activator and regulatory subunit of cAMP-dependent protein
APKMJDPJ_01729	6.85e-295	-	-	-	V	-	-	-	COG0534 Na -driven multidrug efflux pump
APKMJDPJ_01730	5.18e-156	-	-	-	F	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_01731	0.0	-	-	-	P	ko:K07085	-	ko00000	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_01732	0.0	mutA	5.4.99.2	-	I	ko:K01847	ko00280,ko00630,ko00640,ko00720,ko01100,ko01120,ko01200,map00280,map00630,map00640,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	methylmalonyl-CoA mutase small subunit
APKMJDPJ_01733	0.0	mutB	5.4.99.2	-	I	ko:K01847	ko00280,ko00630,ko00640,ko00720,ko01100,ko01120,ko01200,map00280,map00630,map00640,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Psort location Cytoplasmic, score 8.96
APKMJDPJ_01734	0.0	-	3.2.1.51	GH29	G	ko:K01206	ko00511,map00511	ko00000,ko00001,ko01000,ko04147	Alpha-L-fucosidase
APKMJDPJ_01735	0.0	topB	5.99.1.2	-	L	ko:K03169	-	ko00000,ko01000,ko03032	COG0550 Topoisomerase IA
APKMJDPJ_01736	6.6e-169	-	-	-	Q	-	-	-	Domain of unknown function (DUF4396)
APKMJDPJ_01738	1.61e-255	-	3.5.1.24	-	M	ko:K01442	ko00120,ko00121,ko01100,map00120,map00121,map01100	ko00000,ko00001,ko01000	Linear amide C-N hydrolase, choloylglycine hydrolase family protein
APKMJDPJ_01739	0.0	dapE	-	-	E	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_01740	2.95e-263	aroC	4.2.3.5	-	E	ko:K01736	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
APKMJDPJ_01741	1.37e-135	-	-	-	K	-	-	-	RNA polymerase sigma-70 factor, ECF subfamily
APKMJDPJ_01742	7.49e-286	-	-	-	PT	-	-	-	Sigma factor regulatory protein, FecR PupR family
APKMJDPJ_01743	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
APKMJDPJ_01744	0.0	-	-	-	P	ko:K21572	-	ko00000,ko02000	SusD family
APKMJDPJ_01745	0.0	-	-	-	M	-	-	-	phospholipase C
APKMJDPJ_01746	0.0	-	-	-	H	-	-	-	TonB-linked outer membrane protein, SusC RagA family
APKMJDPJ_01747	0.0	-	-	-	P	ko:K21572	-	ko00000,ko02000	SusD family
APKMJDPJ_01749	2.51e-122	-	-	-	K	ko:K03088	-	ko00000,ko03021	RNA polymerase sigma-70 factor
APKMJDPJ_01750	2.65e-246	-	-	-	PT	-	-	-	Domain of unknown function (DUF4974)
APKMJDPJ_01751	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
APKMJDPJ_01752	0.0	-	-	-	S	ko:K21572	-	ko00000,ko02000	SusD family
APKMJDPJ_01753	0.0	-	-	-	S	-	-	-	PQQ enzyme repeat protein
APKMJDPJ_01754	4e-233	-	-	-	S	-	-	-	Metalloenzyme superfamily
APKMJDPJ_01755	6.41e-237	-	-	-	L	-	-	-	Endonuclease/Exonuclease/phosphatase family
APKMJDPJ_01757	0.0	-	-	-	S	-	-	-	Calycin-like beta-barrel domain
APKMJDPJ_01760	3.44e-195	-	-	-	S	-	-	-	COG NOG19137 non supervised orthologous group
APKMJDPJ_01761	7.03e-270	-	-	-	S	-	-	-	non supervised orthologous group
APKMJDPJ_01762	1.12e-296	-	-	-	G	-	-	-	Glycosyl hydrolases family 43
APKMJDPJ_01763	3.04e-296	-	-	-	S	-	-	-	Belongs to the UPF0597 family
APKMJDPJ_01764	4.36e-129	-	-	-	-	-	-	-	-
APKMJDPJ_01765	4.71e-129	slyD	5.2.1.8	-	G	ko:K03775	-	ko00000,ko01000,ko03110	Psort location Cytoplasmic, score
APKMJDPJ_01766	4.41e-197	-	-	-	K	ko:K20968	ko02025,map02025	ko00000,ko00001,ko03000	Transcriptional regulator
APKMJDPJ_01767	0.0	-	-	-	M	-	-	-	COG2885 Outer membrane protein and related peptidoglycan-associated
APKMJDPJ_01768	0.0	-	-	-	S	-	-	-	regulation of response to stimulus
APKMJDPJ_01769	0.0	-	-	-	Q	-	-	-	Collagen triple helix repeat (20 copies)
APKMJDPJ_01770	0.0	-	-	-	N	-	-	-	Domain of unknown function
APKMJDPJ_01771	1.13e-291	-	-	-	S	-	-	-	Domain of unknown function (DUF4221)
APKMJDPJ_01772	0.0	ilvD	4.2.1.9	-	H	ko:K01687	ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the IlvD Edd family
APKMJDPJ_01773	0.0	ilvB	2.2.1.6	-	H	ko:K01652	ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Acetolactate synthase, large subunit
APKMJDPJ_01774	3.5e-126	ilvN	2.2.1.6	-	E	ko:K01653	ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	COG0440 Acetolactate synthase, small (regulatory) subunit
APKMJDPJ_01775	7.18e-181	-	3.1.2.21	-	I	ko:K01071	ko00061,ko01100,map00061,map01100	ko00000,ko00001,ko01000,ko01004	Acyl-ACP thioesterase
APKMJDPJ_01776	4.76e-137	-	-	-	M	-	-	-	Outer membrane protein beta-barrel domain
APKMJDPJ_01777	5.94e-252	ilvC	1.1.1.86	-	E	ko:K00053	ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	ketol-acid reductoisomerase
APKMJDPJ_01778	0.0	-	-	-	S	-	-	-	COG NOG28036 non supervised orthologous group
APKMJDPJ_01779	0.0	-	-	-	L	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_01780	0.0	acnA	4.2.1.3	-	C	ko:K01681	ko00020,ko00630,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Psort location Cytoplasmic, score
APKMJDPJ_01781	4.41e-291	icd	1.1.1.42	-	C	ko:K00031	ko00020,ko00480,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,ko04146,map00020,map00480,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230,map04146	br01601,ko00000,ko00001,ko00002,ko01000	Psort location Cytoplasmic, score
APKMJDPJ_01782	0.0	prpC	2.3.3.1, 2.3.3.5	-	C	ko:K01647,ko:K01659	ko00020,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map00640,map01100,map01110,map01120,map01130,map01200,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Psort location Cytoplasmic, score
APKMJDPJ_01783	9.87e-191	-	1.3.1.22	-	S	ko:K12343	ko00140,map00140	ko00000,ko00001,ko01000	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_01784	2.95e-303	namA	-	-	C	-	-	-	Oxidoreductase, FAD FMN-binding protein
APKMJDPJ_01785	8.51e-210	-	-	-	IQ	-	-	-	Oxidoreductase, short chain dehydrogenase reductase family protein
APKMJDPJ_01786	2.05e-231	pfkA	2.7.1.11	-	F	ko:K00850	ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04152,ko05230,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04152,map05230	ko00000,ko00001,ko00002,ko01000,ko01009,ko03019	Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
APKMJDPJ_01787	2.64e-209	ispH	1.17.7.4	-	IM	ko:K03527	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
APKMJDPJ_01788	2.13e-167	cmk	2.7.4.25	-	F	ko:K00945	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the cytidylate kinase family. Type 1 subfamily
APKMJDPJ_01789	4.46e-156	-	-	-	U	ko:K03832	-	ko00000,ko02000	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
APKMJDPJ_01790	7.16e-231	ispA	2.5.1.1, 2.5.1.10, 2.5.1.29	-	H	ko:K13789	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko01006	Belongs to the FPP GGPP synthase family
APKMJDPJ_01791	9.78e-169	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_01792	5.69e-188	tatD	-	-	L	ko:K03424	-	ko00000,ko01000	hydrolase, TatD family
APKMJDPJ_01794	2.43e-176	exbB	-	-	U	ko:K03561	-	ko00000,ko02000	MotA TolQ ExbB proton channel family
APKMJDPJ_01795	1.5e-101	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
APKMJDPJ_01796	3.21e-136	-	-	-	U	-	-	-	COG NOG14449 non supervised orthologous group
APKMJDPJ_01797	7.46e-101	-	-	-	U	ko:K03559	-	ko00000,ko02000	COG NOG14448 non supervised orthologous group
APKMJDPJ_01798	0.0	-	-	-	S	-	-	-	IgA Peptidase M64
APKMJDPJ_01799	1.05e-111	asnC	-	-	K	ko:K03718	-	ko00000,ko03000	transcriptional regulator, AsnC family
APKMJDPJ_01800	3.73e-116	folA	1.5.1.3	-	H	ko:K00287	ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523	ko00000,ko00001,ko00002,ko01000	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
APKMJDPJ_01801	6.98e-201	thyA	2.1.1.45	-	F	ko:K00560	ko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523	ko00000,ko00001,ko00002,ko01000	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
APKMJDPJ_01802	9.8e-316	cls	-	-	M	ko:K06131	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Belongs to the phospholipase D family. Cardiolipin synthase subfamily
APKMJDPJ_01803	6.88e-71	-	-	-	S	-	-	-	Domain of unknown function (DUF5056)
APKMJDPJ_01804	9e-127	rpoE	-	-	K	ko:K03088	-	ko00000,ko03021	Belongs to the sigma-70 factor family. ECF subfamily
APKMJDPJ_01805	4.69e-144	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
APKMJDPJ_01806	6.49e-84	-	-	-	L	-	-	-	Phage regulatory protein
APKMJDPJ_01807	8.63e-43	-	-	-	S	-	-	-	ORF6N domain
APKMJDPJ_01808	0.0	rsmF	-	-	J	-	-	-	NOL1 NOP2 sun family
APKMJDPJ_01809	8.29e-16	-	-	-	-	-	-	-	-
APKMJDPJ_01810	2.65e-139	-	-	-	-	-	-	-	-
APKMJDPJ_01811	4.05e-273	-	-	-	G	-	-	-	Belongs to the glycosyl hydrolase 43 family
APKMJDPJ_01812	2.87e-269	-	-	-	MU	-	-	-	outer membrane efflux protein
APKMJDPJ_01813	0.0	czcA	-	-	P	-	-	-	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
APKMJDPJ_01814	2.64e-258	-	-	-	M	-	-	-	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
APKMJDPJ_01815	1.72e-87	-	-	-	S	-	-	-	COG NOG32090 non supervised orthologous group
APKMJDPJ_01817	1.62e-22	-	-	-	-	-	-	-	-
APKMJDPJ_01818	0.0	-	-	-	S	ko:K06158	-	ko00000,ko03012	Psort location CytoplasmicMembrane, score
APKMJDPJ_01819	6.53e-89	divK	-	-	T	-	-	-	Response regulator receiver domain protein
APKMJDPJ_01820	0.0	-	-	-	U	-	-	-	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_01821	0.0	ppk	2.7.4.1	-	H	ko:K00937	ko00190,ko03018,map00190,map03018	ko00000,ko00001,ko01000,ko03019	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
APKMJDPJ_01822	4.43e-120	-	-	-	S	ko:K07095	-	ko00000	Psort location Cytoplasmic, score 8.96
APKMJDPJ_01823	9.93e-208	rfbA	2.7.7.24	-	H	ko:K00973	ko00521,ko00523,ko00525,ko01130,map00521,map00523,map00525,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
APKMJDPJ_01824	6.45e-289	rfbB	4.2.1.46	-	M	ko:K01710	ko00521,ko00523,ko00525,ko01055,ko01130,map00521,map00523,map00525,map01055,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
APKMJDPJ_01825	1.17e-216	menA	2.5.1.74	-	H	ko:K02548	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01006	Belongs to the MenA family. Type 1 subfamily
APKMJDPJ_01826	2.28e-243	-	-	-	S	ko:K07098	-	ko00000	Ser Thr phosphatase family protein
APKMJDPJ_01827	8.87e-150	nadD	2.7.7.18	-	H	ko:K00969	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
APKMJDPJ_01828	1.2e-144	gmk	2.7.4.8	-	F	ko:K00942	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko00002,ko01000	Essential for recycling GMP and indirectly, cGMP
APKMJDPJ_01829	2.09e-186	-	-	-	S	-	-	-	stress-induced protein
APKMJDPJ_01831	2.54e-165	yeaZ	-	-	O	ko:K14742	-	ko00000,ko03016	Universal bacterial protein YeaZ
APKMJDPJ_01832	1.99e-139	-	-	-	S	-	-	-	COG NOG11645 non supervised orthologous group
APKMJDPJ_01833	1.61e-310	murA	2.5.1.7	-	M	ko:K00790	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
APKMJDPJ_01834	1.62e-128	rimM	-	-	J	ko:K02860	-	ko00000,ko03009	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
APKMJDPJ_01835	1.64e-201	nlpD_1	-	-	M	-	-	-	Peptidase, M23 family
APKMJDPJ_01836	6.12e-278	dxr	1.1.1.267	-	I	ko:K00099	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP)
APKMJDPJ_01837	0.0	rseP	-	-	M	ko:K11749	ko02024,ko04112,map02024,map04112	ko00000,ko00001,ko01000,ko01002	zinc metalloprotease
APKMJDPJ_01838	6.34e-209	-	-	-	-	-	-	-	-
APKMJDPJ_01839	8.38e-188	phnX	3.11.1.1	-	S	ko:K05306	ko00440,ko01100,ko01120,map00440,map01100,map01120	ko00000,ko00001,ko01000	Belongs to the HAD-like hydrolase superfamily. PhnX family
APKMJDPJ_01840	3.08e-267	phnW	2.6.1.37	-	E	ko:K03430,ko:K09469	ko00440,ko01100,ko01120,map00440,map01100,map01120	ko00000,ko00001,ko01000,ko01007	Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. PhnW subfamily
APKMJDPJ_01841	0.0	-	-	-	EGP	ko:K08169	-	ko00000,ko02000	the major facilitator superfamily
APKMJDPJ_01842	6.95e-114	nrdG	1.97.1.4	-	C	ko:K04068	-	ko00000,ko01000	Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
APKMJDPJ_01843	0.0	nrdD	1.1.98.6	-	FK	ko:K21636	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Psort location Cytoplasmic, score 8.96
APKMJDPJ_01844	3.58e-161	hly-III	-	-	S	ko:K11068	-	ko00000,ko02042	membrane protein, hemolysin III homolog
APKMJDPJ_01845	1.55e-221	ddh	1.4.1.16	-	E	ko:K03340	ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible NADPH-dependent reductive amination of L-2-amino-6-oxopimelate, the acyclic form of L- tetrahydrodipicolinate, to generate the meso compound, D,L-2,6- diaminopimelate
APKMJDPJ_01846	2.06e-130	ruvA	3.6.4.12	-	L	ko:K03550	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
APKMJDPJ_01847	3.31e-125	-	-	-	-	-	-	-	-
APKMJDPJ_01848	2.41e-178	-	-	-	E	-	-	-	IrrE N-terminal-like domain
APKMJDPJ_01849	3.16e-93	-	-	-	K	-	-	-	Helix-turn-helix domain
APKMJDPJ_01850	9.99e-125	-	2.3.1.183	-	M	ko:K03823	ko00440,ko01130,map00440,map01130	ko00000,ko00001,ko01000	FR47-like protein
APKMJDPJ_01851	6.52e-248	-	-	-	S	-	-	-	COG NOG26961 non supervised orthologous group
APKMJDPJ_01852	3.8e-06	-	-	-	-	-	-	-	-
APKMJDPJ_01853	4.31e-166	rpiA	5.3.1.6	-	G	ko:K01807	ko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	COG COG0120 Ribose 5-phosphate isomerase
APKMJDPJ_01854	1.1e-103	-	-	-	L	-	-	-	Bacterial DNA-binding protein
APKMJDPJ_01855	3.71e-53	-	-	-	S	-	-	-	Domain of unknown function (DUF4248)
APKMJDPJ_01857	0.0	-	-	-	S	-	-	-	Spi protease inhibitor
APKMJDPJ_01859	0.0	-	-	-	S	-	-	-	P-loop ATPase and inactivated derivatives
APKMJDPJ_01861	5.24e-123	-	-	-	K	-	-	-	Transcription termination antitermination factor NusG
APKMJDPJ_01862	5e-116	-	-	-	S	-	-	-	UpxZ family of transcription anti-terminator antagonists
APKMJDPJ_01863	4.48e-256	tagO	-	-	M	-	-	-	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_01864	8.63e-309	-	-	-	S	-	-	-	Polysaccharide biosynthesis protein
APKMJDPJ_01865	2.93e-238	-	-	-	C	-	-	-	Nitroreductase family
APKMJDPJ_01866	7.09e-284	-	-	-	S	ko:K16710	-	ko00000	Polysaccharide pyruvyl transferase
APKMJDPJ_01867	1.08e-249	-	2.4.1.152, 2.4.1.65	GT10	S	ko:K20151	-	ko00000,ko01000,ko01003	Glycosyltransferase family 10 (fucosyltransferase) C-term
APKMJDPJ_01868	1.43e-222	-	-	-	M	-	-	-	Glycosyltransferase, group 2 family
APKMJDPJ_01869	6.41e-236	-	-	-	M	-	-	-	Glycosyltransferase
APKMJDPJ_01870	2.53e-206	rfaG	-	-	M	-	-	-	Glycosyl transferase family 2
APKMJDPJ_01871	2.01e-05	-	-	-	S	-	-	-	EpsG family
APKMJDPJ_01872	7.99e-253	-	-	-	M	-	-	-	Glycosyl transferases group 1
APKMJDPJ_01873	1.32e-188	-	-	-	M	-	-	-	Glycosyltransferase, group 2 family protein
APKMJDPJ_01874	1.16e-210	rmlA	2.7.7.24	-	H	ko:K00973	ko00521,ko00523,ko00525,ko01130,map00521,map00523,map00525,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
APKMJDPJ_01875	1.19e-130	rfbC	5.1.3.13	-	G	ko:K01790	ko00521,ko00523,ko01130,map00521,map00523,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
APKMJDPJ_01876	5.26e-174	-	-	-	GM	-	-	-	COG4464 Capsular polysaccharide biosynthesis protein
APKMJDPJ_01878	2.33e-82	cspG	-	-	K	-	-	-	Cold-shock DNA-binding domain protein
APKMJDPJ_01879	1.67e-221	-	-	-	S	-	-	-	Haem-binding uptake, Tiki superfamily, ChaN
APKMJDPJ_01880	0.0	-	-	-	S	ko:K07263	-	ko00000,ko01000,ko01002	Peptidase M16 inactive domain
APKMJDPJ_01881	1.33e-294	-	-	-	S	-	-	-	Domain of unknown function (DUF4929)
APKMJDPJ_01882	0.0	-	-	-	E	ko:K21572	-	ko00000,ko02000	Pfam:SusD
APKMJDPJ_01883	0.0	-	-	-	H	-	-	-	CarboxypepD_reg-like domain
APKMJDPJ_01884	1.68e-192	-	-	-	-	-	-	-	-
APKMJDPJ_01885	0.0	cca	2.7.7.19, 2.7.7.72	-	J	ko:K00970,ko:K00974	ko03013,ko03018,map03013,map03018	ko00000,ko00001,ko01000,ko03016,ko03019	tRNA nucleotidyltransferase poly(A) polymerase
APKMJDPJ_01886	0.0	-	-	-	S	-	-	-	WD40 repeats
APKMJDPJ_01887	0.0	-	-	-	S	-	-	-	Caspase domain
APKMJDPJ_01888	1.19e-279	pepQ	3.4.11.9, 3.4.13.9	-	E	ko:K01262,ko:K01271	-	ko00000,ko01000,ko01002	xaa-pro dipeptidase K01271
APKMJDPJ_01889	0.0	gdh	1.4.1.4	-	C	ko:K00262	ko00220,ko00250,ko00910,ko01100,map00220,map00250,map00910,map01100	ko00000,ko00001,ko01000	Belongs to the Glu Leu Phe Val dehydrogenases family
APKMJDPJ_01890	0.0	ppsA	-	-	GKT	-	-	-	Pyruvate phosphate dikinase, PEP pyruvate binding domain
APKMJDPJ_01891	1.87e-178	-	-	-	S	-	-	-	Domain of unknown function (DUF4493)
APKMJDPJ_01892	1.4e-299	-	-	-	S	-	-	-	Domain of unknown function (DUF4493)
APKMJDPJ_01893	0.0	-	-	-	S	-	-	-	Domain of unknown function (DUF4493)
APKMJDPJ_01894	9.42e-174	-	-	-	NU	-	-	-	Tfp pilus assembly protein FimV
APKMJDPJ_01895	0.0	-	-	-	S	-	-	-	Putative carbohydrate metabolism domain
APKMJDPJ_01896	0.0	-	-	-	S	-	-	-	Psort location OuterMembrane, score
APKMJDPJ_01897	1.14e-157	-	-	-	S	-	-	-	Domain of unknown function (DUF4493)
APKMJDPJ_01899	1.26e-286	-	-	-	S	-	-	-	AAA domain, putative AbiEii toxin, Type IV TA system
APKMJDPJ_01900	1.86e-119	-	-	-	-	-	-	-	-
APKMJDPJ_01901	1.33e-79	-	-	-	-	-	-	-	-
APKMJDPJ_01902	0.0	-	-	-	-	-	-	-	-
APKMJDPJ_01904	1.15e-98	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
APKMJDPJ_01905	1.26e-67	-	-	-	-	-	-	-	-
APKMJDPJ_01907	4.43e-273	-	-	-	-	-	-	-	-
APKMJDPJ_01908	4.06e-211	-	2.1.1.72	-	L	ko:K00571,ko:K07319	-	ko00000,ko01000,ko02048	Belongs to the N(4) N(6)-methyltransferase family
APKMJDPJ_01910	3.23e-248	-	-	-	-	-	-	-	-
APKMJDPJ_01911	1.31e-286	-	-	-	S	-	-	-	Concanavalin A-like lectin/glucanases superfamily
APKMJDPJ_01912	2.62e-265	-	-	-	G	-	-	-	Putative glycoside hydrolase Family 18, chitinase_18
APKMJDPJ_01913	0.0	-	-	-	S	-	-	-	Susd and RagB outer membrane lipoprotein
APKMJDPJ_01914	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
APKMJDPJ_01915	4.54e-241	-	-	-	PT	-	-	-	Sigma factor regulatory protein, FecR PupR family
APKMJDPJ_01916	2.21e-121	rpoE3	-	-	K	ko:K03088	-	ko00000,ko03021	RNA polymerase sigma-70 factor
APKMJDPJ_01917	0.0	gdhA	1.4.1.4	-	C	ko:K00262	ko00220,ko00250,ko00910,ko01100,map00220,map00250,map00910,map01100	ko00000,ko00001,ko01000	Belongs to the Glu Leu Phe Val dehydrogenases family
APKMJDPJ_01919	2.9e-31	-	-	-	-	-	-	-	-
APKMJDPJ_01920	0.0	maeB	1.1.1.38, 1.1.1.40	-	C	ko:K00027,ko:K00029	ko00620,ko00710,ko01100,ko01120,ko01200,ko02020,map00620,map00710,map01100,map01120,map01200,map02020	ko00000,ko00001,ko00002,ko01000	Psort location Cytoplasmic, score
APKMJDPJ_01921	1.69e-56	-	-	-	S	-	-	-	COG NOG23407 non supervised orthologous group
APKMJDPJ_01922	1.37e-60	-	-	-	D	ko:K09888	-	ko00000,ko03036	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
APKMJDPJ_01923	0.0	rny	-	-	S	ko:K18682	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	Endoribonuclease that initiates mRNA decay
APKMJDPJ_01924	3.14e-177	cutC	-	-	P	ko:K06201	-	ko00000	Participates in the control of copper homeostasis
APKMJDPJ_01925	4.63e-116	-	-	-	S	-	-	-	COG NOG29454 non supervised orthologous group
APKMJDPJ_01926	1.41e-288	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_01927	1.22e-136	mtnN	3.2.2.9	-	F	ko:K01243	ko00270,ko01100,ko01230,map00270,map01100,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
APKMJDPJ_01928	3.51e-76	-	-	-	S	ko:K09790	-	ko00000	Psort location CytoplasmicMembrane, score
APKMJDPJ_01929	1.68e-76	queD	4.1.2.50, 4.2.3.12	-	H	ko:K01737	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000,ko03016	Psort location Cytoplasmic, score
APKMJDPJ_01930	5.04e-137	queE	4.3.99.3	-	H	ko:K10026	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko01000,ko03016	Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds
APKMJDPJ_01931	1.7e-183	-	-	-	C	ko:K18928	-	ko00000	Psort location Cytoplasmic, score 8.96
APKMJDPJ_01932	0.0	-	-	-	C	ko:K18929	-	ko00000	electron transport protein YkgF
APKMJDPJ_01933	2.27e-134	lutC	-	-	S	ko:K00782	-	ko00000	Psort location Cytoplasmic, score 8.96
APKMJDPJ_01934	3.34e-212	pdxK	2.7.1.35	-	H	ko:K00868	ko00750,ko01100,map00750,map01100	ko00000,ko00001,ko01000	Pyridoxal kinase
APKMJDPJ_01935	3.78e-59	-	-	-	S	-	-	-	COG NOG30576 non supervised orthologous group
APKMJDPJ_01937	0.0	-	-	-	S	ko:K07114	-	ko00000,ko02000	Von Willebrand factor type A domain protein
APKMJDPJ_01938	3.7e-155	-	-	-	I	-	-	-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
APKMJDPJ_01939	4.06e-218	-	2.7.7.41	-	M	ko:K00981	ko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070	ko00000,ko00001,ko00002,ko01000	Belongs to the CDS family
APKMJDPJ_01940	4.33e-154	-	-	-	I	-	-	-	Acyl-transferase
APKMJDPJ_01941	3.63e-135	-	-	-	K	ko:K03088	-	ko00000,ko03021	Belongs to the sigma-70 factor family. ECF subfamily
APKMJDPJ_01942	1.08e-267	-	-	-	M	-	-	-	Carboxypeptidase regulatory-like domain
APKMJDPJ_01944	1.51e-80	-	1.20.4.1	-	P	ko:K00537	-	ko00000,ko01000	Belongs to the ArsC family
APKMJDPJ_01945	8.54e-141	mug	-	-	L	-	-	-	COG3663 G T U mismatch-specific DNA glycosylase
APKMJDPJ_01946	5.07e-175	-	-	-	S	-	-	-	Domain of unknown function (DUF5020)
APKMJDPJ_01947	4.94e-304	pbuX	-	-	F	ko:K16345	-	ko00000,ko02000	xanthine permease
APKMJDPJ_01948	0.0	eam	5.4.3.2	-	E	ko:K01843	ko00310,map00310	ko00000,ko00001,ko01000	KamA family
APKMJDPJ_01949	6.92e-148	-	-	-	S	-	-	-	COG NOG25304 non supervised orthologous group
APKMJDPJ_01950	0.0	agcS	-	-	E	ko:K03310	-	ko00000	amino acid carrier protein
APKMJDPJ_01951	5.71e-152	-	-	-	K	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_01952	1.97e-29	-	-	-	S	-	-	-	COG NOG16623 non supervised orthologous group
APKMJDPJ_01953	3.37e-275	msrA	1.8.4.11, 1.8.4.12	-	O	ko:K07304,ko:K12267	-	ko00000,ko01000	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
APKMJDPJ_01954	7.95e-220	-	-	-	K	-	-	-	WYL domain
APKMJDPJ_01955	1.6e-308	-	-	-	S	-	-	-	DNA-binding protein with the Helix-hairpin-helix motif
APKMJDPJ_01956	7.96e-189	-	-	-	L	-	-	-	DNA metabolism protein
APKMJDPJ_01957	4.27e-147	-	-	-	S	ko:K07507	-	ko00000,ko02000	Mg2 transporter-C family protein
APKMJDPJ_01958	1.12e-78	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 9.46
APKMJDPJ_01959	0.0	recD2_4	-	-	L	-	-	-	COG COG1112 Superfamily I DNA and RNA helicases and helicase subunits
APKMJDPJ_01960	1.57e-194	-	-	-	J	ko:K10716	-	ko00000,ko02000	Transporter, cation channel family protein
APKMJDPJ_01961	8.65e-228	mltD_2	-	-	M	-	-	-	Transglycosylase SLT domain protein
APKMJDPJ_01962	6.88e-71	-	-	-	-	-	-	-	-
APKMJDPJ_01963	0.0	-	-	-	P	ko:K07787,ko:K15726	ko02020,map02020	ko00000,ko00001,ko02000	AcrB/AcrD/AcrF family
APKMJDPJ_01964	1.46e-308	-	-	-	MU	-	-	-	Outer membrane efflux protein
APKMJDPJ_01965	0.0	-	-	-	MP	ko:K07798	ko02020,map02020	ko00000,ko00001,ko02000	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
APKMJDPJ_01967	1.55e-191	-	-	-	S	-	-	-	Fimbrillin-like
APKMJDPJ_01968	1.38e-195	-	-	-	S	-	-	-	Fimbrillin-like
APKMJDPJ_01969	2.59e-160	-	-	-	S	ko:K07025	-	ko00000	Psort location Cytoplasmic, score 8.96
APKMJDPJ_01970	3.54e-73	sugE	-	-	P	ko:K11741	-	ko00000,ko02000	Multidrug resistance protein, SMR family
APKMJDPJ_01971	4.36e-22	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
APKMJDPJ_01972	0.0	-	-	-	V	-	-	-	ABC transporter, permease protein
APKMJDPJ_01973	3.8e-105	-	-	-	S	-	-	-	COG NOG19145 non supervised orthologous group
APKMJDPJ_01974	9.25e-54	-	-	-	-	-	-	-	-
APKMJDPJ_01975	6.15e-57	-	-	-	-	-	-	-	-
APKMJDPJ_01976	4.17e-239	-	-	-	-	-	-	-	-
APKMJDPJ_01977	2.52e-237	-	-	-	H	-	-	-	Homocysteine S-methyltransferase
APKMJDPJ_01978	2.36e-247	-	3.5.1.28	-	M	ko:K01448	ko01503,map01503	ko00000,ko00001,ko00002,ko01000,ko01011,ko03036	N-acetylmuramoyl-L-alanine amidase
APKMJDPJ_01979	0.0	metZ	2.5.1.49	-	E	ko:K01740,ko:K10764	ko00270,ko00920,ko01100,map00270,map00920,map01100	ko00000,ko00001,ko01000	Psort location Cytoplasmic, score
APKMJDPJ_01980	0.0	-	-	-	MU	-	-	-	Efflux transporter, outer membrane factor lipoprotein, NodT family
APKMJDPJ_01981	0.0	-	-	-	V	ko:K03296	-	ko00000	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
APKMJDPJ_01982	1.38e-254	-	-	-	M	ko:K03585	ko01501,ko01503,map01501,map01503	ko00000,ko00001,ko00002,ko01504,ko02000,ko03036	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
APKMJDPJ_01983	7.58e-209	thiD	2.7.1.49, 2.7.4.7	-	K	ko:K00941	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	transcriptional regulator (AraC family)
APKMJDPJ_01985	7.12e-62	-	-	-	S	-	-	-	YCII-related domain
APKMJDPJ_01986	0.0	-	1.1.1.205	-	F	ko:K00088	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko04147	IMP dehydrogenase / GMP reductase domain
APKMJDPJ_01987	0.0	-	-	-	V	-	-	-	Domain of unknown function DUF302
APKMJDPJ_01988	2.33e-165	-	-	-	Q	-	-	-	Isochorismatase family
APKMJDPJ_01989	0.0	-	2.1.3.15, 6.4.1.3	-	I	ko:K01966	ko00280,ko00630,ko00640,ko01100,ko01120,ko01130,ko01200,map00280,map00630,map00640,map01100,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Carboxyl transferase domain
APKMJDPJ_01990	3.71e-84	-	6.4.1.1	-	I	ko:K01960	ko00020,ko00620,ko00720,ko01100,ko01120,ko01200,ko01230,map00020,map00620,map00720,map01100,map01120,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Biotin-requiring enzyme
APKMJDPJ_01991	0.0	accC	6.3.4.14, 6.4.1.2, 6.4.1.3	-	I	ko:K01961,ko:K01965	ko00061,ko00280,ko00620,ko00630,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00280,map00620,map00630,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002,ko01000	Biotin carboxylase
APKMJDPJ_01992	0.0	-	-	-	P	ko:K03455	-	ko00000	Sodium/hydrogen exchanger family
APKMJDPJ_01993	1.7e-303	-	-	-	CO	-	-	-	COG NOG23392 non supervised orthologous group
APKMJDPJ_01994	2.36e-291	pncB	6.3.4.21	-	F	ko:K00763	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
APKMJDPJ_01995	1.66e-211	-	-	-	K	ko:K20968	ko02025,map02025	ko00000,ko00001,ko03000	Transcriptional regulator
APKMJDPJ_01996	2.38e-294	-	-	-	L	-	-	-	Phage integrase SAM-like domain
APKMJDPJ_01997	2.87e-214	-	-	-	K	-	-	-	Helix-turn-helix domain
APKMJDPJ_01998	1.03e-300	-	-	-	S	-	-	-	Major fimbrial subunit protein (FimA)
APKMJDPJ_01999	4.97e-219	-	-	-	S	-	-	-	Fimbrillin-A associated anchor proteins Mfa1 and Mfa2
APKMJDPJ_02000	0.0	-	-	-	-	-	-	-	-
APKMJDPJ_02001	0.0	-	-	-	-	-	-	-	-
APKMJDPJ_02002	0.0	-	-	-	S	-	-	-	Domain of unknown function (DUF4906)
APKMJDPJ_02003	1.29e-159	-	-	-	S	-	-	-	Protein of unknown function (DUF1566)
APKMJDPJ_02004	3.78e-89	-	-	-	-	-	-	-	-
APKMJDPJ_02005	5.62e-137	-	-	-	M	-	-	-	(189 aa) fasta scores E()
APKMJDPJ_02006	0.0	-	-	-	M	-	-	-	chlorophyll binding
APKMJDPJ_02007	7.71e-182	-	1.1.1.159, 1.3.1.25	-	IQ	ko:K00076,ko:K05783	ko00121,ko00362,ko00364,ko00622,ko01100,ko01120,ko01220,map00121,map00362,map00364,map00622,map01100,map01120,map01220	br01602,ko00000,ko00001,ko00002,ko01000	Oxidoreductase, short chain dehydrogenase reductase family protein
APKMJDPJ_02008	7.45e-198	-	-	-	S	-	-	-	COG NOG27239 non supervised orthologous group
APKMJDPJ_02009	6.3e-91	yuxK	-	-	S	-	-	-	Protein of unknown function, DUF393
APKMJDPJ_02010	3.43e-106	nodN	-	-	I	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_02011	2.05e-179	ric	-	-	C	ko:K07322	-	ko00000	Di-iron-containing protein involved in the repair of iron-sulfur clusters
APKMJDPJ_02012	1.17e-144	-	-	-	-	-	-	-	-
APKMJDPJ_02013	0.0	-	-	-	S	-	-	-	Fibrobacter succinogenes major paralogous
APKMJDPJ_02014	4.39e-210	-	-	-	K	ko:K13652	-	ko00000,ko03000	Transcriptional regulator, effector binding domain protein
APKMJDPJ_02015	2.73e-167	ung	3.2.2.27	-	L	ko:K03648	ko03410,ko05340,map03410,map05340	ko00000,ko00001,ko01000,ko03400	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
APKMJDPJ_02016	4.33e-69	-	-	-	S	-	-	-	Cupin domain
APKMJDPJ_02017	9.09e-298	-	-	-	V	-	-	-	COG0534 Na -driven multidrug efflux pump
APKMJDPJ_02018	5.46e-136	-	-	-	J	ko:K03827	-	ko00000,ko01000	Acetyltransferase (GNAT) domain
APKMJDPJ_02020	3.27e-299	-	-	-	G	-	-	-	Glycosyl hydrolase
APKMJDPJ_02021	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
APKMJDPJ_02022	0.0	-	-	-	S	ko:K21572	-	ko00000,ko02000	SusD family
APKMJDPJ_02023	1.28e-260	nanA	3.2.1.18	GH33	G	ko:K01186	ko00511,ko00600,ko04142,map00511,map00600,map04142	ko00000,ko00001,ko01000,ko02042	exo-alpha-(2->6)-sialidase activity
APKMJDPJ_02024	0.0	hypBA2	-	-	G	-	-	-	BNR repeat-like domain
APKMJDPJ_02025	0.0	-	3.1.1.53	-	G	ko:K05970	-	ko00000,ko01000	Glycosyl hydrolase family 2, sugar binding domain protein
APKMJDPJ_02026	0.0	-	3.2.1.20	GH31	M	ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	COG NOG06228 non supervised orthologous group
APKMJDPJ_02027	0.0	-	-	-	T	-	-	-	Response regulator receiver domain protein
APKMJDPJ_02028	6.42e-200	-	-	-	K	-	-	-	Transcriptional regulator
APKMJDPJ_02029	1.53e-123	-	-	-	C	-	-	-	Putative TM nitroreductase
APKMJDPJ_02030	1.14e-138	-	2.3.1.18, 2.3.1.79	-	S	ko:K00633,ko:K00661	-	ko00000,ko01000	COG0110 Acetyltransferase (isoleucine patch superfamily)
APKMJDPJ_02031	2.73e-154	-	3.1.3.18, 3.6.1.1	-	S	ko:K01091,ko:K06019	ko00190,ko00630,ko01100,ko01110,ko01130,map00190,map00630,map01100,map01110,map01130	ko00000,ko00001,ko01000	Phosphoglycolate phosphatase
APKMJDPJ_02032	0.0	-	-	-	S	-	-	-	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
APKMJDPJ_02033	0.0	-	3.6.4.12	-	K	ko:K03655	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Divergent AAA domain protein
APKMJDPJ_02034	3.27e-170	-	-	-	-	-	-	-	-
APKMJDPJ_02035	4.9e-76	-	3.6.4.12	-	K	ko:K03655	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Divergent AAA domain protein
APKMJDPJ_02036	9.14e-146	-	-	-	T	-	-	-	Catabolite gene activator and regulatory subunit of cAMP-dependent protein
APKMJDPJ_02037	1.71e-76	-	-	-	S	-	-	-	Cupin domain
APKMJDPJ_02038	1.95e-221	-	-	-	K	-	-	-	transcriptional regulator pa4120 SWALL Q9HWR1 (EMBL AE004828) (303 aa) fasta scores E()
APKMJDPJ_02039	1.4e-237	-	-	-	C	-	-	-	aldo keto reductase
APKMJDPJ_02040	1.89e-34	-	-	-	-	-	-	-	-
APKMJDPJ_02041	4.86e-101	-	-	-	-	-	-	-	-
APKMJDPJ_02042	4.24e-71	-	-	-	S	-	-	-	Helix-turn-helix domain
APKMJDPJ_02043	2.74e-157	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_02044	1.95e-218	-	-	-	U	-	-	-	Relaxase mobilization nuclease domain protein
APKMJDPJ_02045	3.29e-82	-	-	-	S	-	-	-	Bacterial mobilisation protein (MobC)
APKMJDPJ_02046	1.53e-242	-	-	-	L	-	-	-	Toprim-like
APKMJDPJ_02047	2.09e-303	virE2	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_02048	3.28e-63	-	-	-	S	-	-	-	Helix-turn-helix domain
APKMJDPJ_02049	1.09e-65	-	-	-	K	-	-	-	Helix-turn-helix domain
APKMJDPJ_02050	4.44e-65	-	-	-	S	-	-	-	Helix-turn-helix domain
APKMJDPJ_02051	8.91e-250	-	-	-	-	-	-	-	-
APKMJDPJ_02052	0.0	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
APKMJDPJ_02053	4.08e-182	-	-	-	L	-	-	-	Arm DNA-binding domain
APKMJDPJ_02055	1.1e-245	thiL	2.7.4.16	-	H	ko:K00946	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
APKMJDPJ_02056	6.62e-193	deoD	2.4.2.1	-	F	ko:K03783	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
APKMJDPJ_02057	4.14e-279	lpxK	2.7.1.130	-	F	ko:K00912	ko00540,ko01100,map00540,map01100	ko00000,ko00001,ko00002,ko01000,ko01005	Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA)
APKMJDPJ_02058	0.0	sppA	-	-	OU	ko:K04773	-	ko00000,ko01000,ko01002	signal peptide peptidase SppA, 67K type
APKMJDPJ_02059	8.47e-117	-	1.16.3.1	-	S	ko:K03594	ko00860,map00860	ko00000,ko00001,ko01000	Ferritin-like domain
APKMJDPJ_02060	3.62e-67	-	-	-	M	-	-	-	Putative OmpA-OmpF-like porin family
APKMJDPJ_02061	4.14e-74	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
APKMJDPJ_02062	0.0	scrL	-	-	P	-	-	-	TonB-dependent receptor
APKMJDPJ_02063	2.28e-117	scrL	-	-	P	-	-	-	TonB-dependent receptor
APKMJDPJ_02064	0.0	sacC	3.2.1.80	-	G	ko:K03332	ko00051,map00051	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 32 family
APKMJDPJ_02065	4.42e-271	-	-	-	G	-	-	-	Transporter, major facilitator family protein
APKMJDPJ_02066	7.05e-217	ydjH_1	2.7.1.4	-	G	ko:K00847	ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100	ko00000,ko00001,ko01000	pfkB family
APKMJDPJ_02067	0.0	-	-	-	T	-	-	-	ATPase histidine kinase DNA gyrase B HSP90 domain protein
APKMJDPJ_02068	3.46e-80	ogt	2.1.1.63	-	L	ko:K00567,ko:K07443	-	ko00000,ko01000,ko03400	6-O-methylguanine DNA methyltransferase, DNA binding domain
APKMJDPJ_02069	5.5e-282	proV	3.6.3.32	-	P	ko:K02000	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	COG4175 ABC-type proline glycine betaine transport system, ATPase component
APKMJDPJ_02070	7.65e-185	opuAB	-	-	P	ko:K02001	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	glycine betaine transport system, permease
APKMJDPJ_02071	7.66e-199	opuAC	-	-	E	ko:K02002	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter, substrate-binding protein, QAT family
APKMJDPJ_02072	1.12e-124	-	-	-	K	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_02073	0.0	nifJ	1.2.7.1	-	C	ko:K03737	ko00010,ko00020,ko00620,ko00650,ko00720,ko01100,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00650,map00720,map01100,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
APKMJDPJ_02074	1.27e-128	-	-	-	S	ko:K09940	-	ko00000	Domain of unknown function (DUF4870)
APKMJDPJ_02075	2.27e-291	-	-	-	S	ko:K07133	-	ko00000	ATPase (AAA superfamily)
APKMJDPJ_02076	8.59e-293	-	-	-	S	-	-	-	Psort location Cytoplasmic, score
APKMJDPJ_02077	0.0	-	-	-	T	-	-	-	ATPase histidine kinase DNA gyrase B HSP90 domain protein
APKMJDPJ_02078	2.28e-232	yngK	-	-	S	-	-	-	lipoprotein YddW precursor K01189
APKMJDPJ_02079	6.28e-127	yngK	-	-	S	-	-	-	lipoprotein YddW precursor K01189
APKMJDPJ_02080	0.0	cstA	-	-	T	ko:K06200	-	ko00000	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_02081	3.62e-33	-	-	-	S	-	-	-	COG NOG34202 non supervised orthologous group
APKMJDPJ_02082	1.05e-112	-	-	-	MU	-	-	-	COG NOG29365 non supervised orthologous group
APKMJDPJ_02083	0.0	uvrA1	-	-	L	ko:K03701	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
APKMJDPJ_02084	0.0	yngK	-	-	S	-	-	-	lipoprotein YddW precursor
APKMJDPJ_02085	7.11e-124	-	-	-	P	ko:K07240	-	ko00000,ko02000	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_02086	1.56e-126	chrA	-	-	P	ko:K07240	-	ko00000,ko02000	Psort location CytoplasmicMembrane, score
APKMJDPJ_02087	0.0	-	-	-	T	-	-	-	Psort location CytoplasmicMembrane, score
APKMJDPJ_02088	0.0	purL	6.3.5.3	-	F	ko:K01952	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate
APKMJDPJ_02089	0.0	-	-	-	S	-	-	-	Domain of unknown function (DUF4841)
APKMJDPJ_02090	2.77e-290	-	-	-	MU	-	-	-	Psort location OuterMembrane, score
APKMJDPJ_02091	0.0	-	-	-	V	-	-	-	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
APKMJDPJ_02092	1.72e-245	-	-	-	M	-	-	-	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
APKMJDPJ_02093	0.0	-	2.4.1.8	GH65	G	ko:K00691	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	Glycosyl hydrolase family 65 central catalytic domain
APKMJDPJ_02094	0.0	-	-	-	G	ko:K16211	-	ko00000,ko02000	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_02095	7.01e-244	cytR	-	-	K	ko:K02529,ko:K05499	-	ko00000,ko03000	Psort location Cytoplasmic, score 9.97
APKMJDPJ_02096	0.0	-	-	-	P	ko:K21573	-	ko00000,ko02000	TonB-linked outer membrane protein, SusC RagA family
APKMJDPJ_02097	0.0	susD	-	-	M	ko:K21572	-	ko00000,ko02000	SusD family
APKMJDPJ_02098	0.0	-	-	-	S	ko:K21571	-	ko00000	SusE outer membrane protein
APKMJDPJ_02099	0.0	treZ_2	-	-	M	-	-	-	branching enzyme
APKMJDPJ_02100	0.0	-	-	-	S	-	-	-	Peptidase family M48
APKMJDPJ_02101	1.05e-282	-	-	-	CO	-	-	-	Antioxidant, AhpC TSA family
APKMJDPJ_02102	1.31e-54	rpmE2	-	-	J	ko:K02909	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L31
APKMJDPJ_02103	2.3e-255	-	-	-	S	-	-	-	Endonuclease Exonuclease phosphatase family
APKMJDPJ_02104	2.34e-241	fba	4.1.2.13	-	G	ko:K01624	ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Psort location Cytoplasmic, score
APKMJDPJ_02105	0.0	-	-	-	EGP	-	-	-	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_02106	1e-248	-	-	-	V	ko:K03543	-	ko00000,ko00002,ko02000	Auxiliary transport protein, membrane fusion protein (MFP) family protein
APKMJDPJ_02107	3.93e-99	-	-	-	K	-	-	-	Transcriptional regulator, MarR family
APKMJDPJ_02108	0.0	amyA2	3.2.1.135	GH13	G	ko:K21575	-	ko00000,ko01000	Belongs to the glycosyl hydrolase 13 family
APKMJDPJ_02109	3.79e-291	-	-	-	S	-	-	-	Tetratricopeptide repeat protein
APKMJDPJ_02110	0.0	-	-	-	S	-	-	-	Tetratricopeptide repeat protein
APKMJDPJ_02111	1.54e-270	oadB	4.1.1.3	-	C	ko:K01572	ko00620,ko01100,map00620,map01100	ko00000,ko00001,ko01000,ko02000	sodium ion-translocating decarboxylase, beta subunit
APKMJDPJ_02112	9.49e-76	mmdC	-	-	I	-	-	-	first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
APKMJDPJ_02113	2.76e-218	-	-	-	C	-	-	-	Lamin Tail Domain
APKMJDPJ_02114	0.0	mmdA	-	-	I	-	-	-	COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta)
APKMJDPJ_02115	9.59e-92	mce	5.1.99.1	-	E	ko:K05606	ko00280,ko00630,ko00640,ko00720,ko01100,ko01120,ko01200,map00280,map00630,map00640,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Psort location Cytoplasmic, score 8.96
APKMJDPJ_02116	4.93e-244	-	-	-	V	-	-	-	COG NOG22551 non supervised orthologous group
APKMJDPJ_02117	8.29e-127	cah	4.2.1.1	-	P	ko:K01673	ko00910,map00910	ko00000,ko00001,ko01000	Reversible hydration of carbon dioxide
APKMJDPJ_02118	2.94e-113	-	-	-	C	-	-	-	Nitroreductase family
APKMJDPJ_02119	2.79e-66	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
APKMJDPJ_02120	2.3e-185	-	-	-	S	-	-	-	NADP oxidoreductase coenzyme F420-dependent
APKMJDPJ_02121	7.52e-126	kdsC	3.1.3.45	-	S	ko:K03270	ko00540,ko01100,map00540,map01100	ko00000,ko00001,ko00002,ko01000,ko01005	3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family
APKMJDPJ_02122	2.08e-137	maf	-	-	D	ko:K06287	-	ko00000	COG0424 Nucleotide-binding protein implicated in inhibition of septum formation
APKMJDPJ_02123	1.28e-85	-	-	-	-	-	-	-	-
APKMJDPJ_02124	8.71e-259	-	-	-	-	-	-	-	-
APKMJDPJ_02125	1.38e-85	-	-	-	M	-	-	-	MBOAT, membrane-bound O-acyltransferase family
APKMJDPJ_02126	1.96e-189	-	-	-	M	-	-	-	MBOAT, membrane-bound O-acyltransferase family
APKMJDPJ_02127	3.33e-51	-	-	-	IQ	ko:K02078	-	ko00000,ko00001	Phosphopantetheine attachment site
APKMJDPJ_02128	0.0	-	-	-	Q	-	-	-	AMP-binding enzyme
APKMJDPJ_02129	5.78e-212	-	-	-	G	-	-	-	Glycosyl hydrolase family 16
APKMJDPJ_02130	2.44e-120	-	-	-	S	-	-	-	Family of unknown function (DUF3836)
APKMJDPJ_02131	0.0	-	-	-	S	-	-	-	Tetratricopeptide repeat protein
APKMJDPJ_02132	1.13e-293	-	-	-	S	ko:K07148	-	ko00000	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_02133	2.58e-255	-	-	-	P	-	-	-	phosphate-selective porin O and P
APKMJDPJ_02134	2.49e-202	-	-	-	P	ko:K02051	-	ko00000,ko00002,ko02000	NMT1/THI5 like
APKMJDPJ_02135	2.23e-298	pgk	2.7.2.3	-	F	ko:K00927	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Psort location Cytoplasmic, score
APKMJDPJ_02136	1.83e-163	nth	4.2.99.18	-	L	ko:K10773	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
APKMJDPJ_02137	2.41e-280	-	-	-	EGP	-	-	-	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_02138	5.57e-247	pheS	6.1.1.20	-	J	ko:K01889	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
APKMJDPJ_02141	1.3e-78	-	-	-	S	-	-	-	COG NOG30624 non supervised orthologous group
APKMJDPJ_02142	2.38e-134	ruvC	3.1.22.4	-	L	ko:K01159	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
APKMJDPJ_02143	0.0	pulA	3.2.1.41	CBM48,GH13	G	ko:K01200	ko00500,ko01100,ko01110,map00500,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 13 family
APKMJDPJ_02144	4.09e-125	-	-	-	K	ko:K03088	-	ko00000,ko03021	Bacterial regulatory proteins, luxR family
APKMJDPJ_02145	5.74e-241	-	-	-	PT	-	-	-	Domain of unknown function (DUF4974)
APKMJDPJ_02146	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
APKMJDPJ_02147	0.0	-	-	-	E	ko:K21572	-	ko00000,ko02000	Pfam:SusD
APKMJDPJ_02148	0.0	-	-	-	G	-	-	-	Glycosyl hydrolase family 20, catalytic domain
APKMJDPJ_02149	0.0	-	3.1.6.1	-	P	ko:K01130	ko00140,ko00600,map00140,map00600	ko00000,ko00001,ko01000	Arylsulfatase
APKMJDPJ_02150	0.0	modF	-	-	P	ko:K05776	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC molybdenum transporter, ATP-binding subunit modF
APKMJDPJ_02151	0.0	-	-	-	O	-	-	-	Domain present in PSD-95, Dlg, and ZO-1/2.
APKMJDPJ_02152	5.93e-185	gpmA	5.4.2.11	-	G	ko:K01834	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
APKMJDPJ_02153	1.54e-258	fbaB	4.1.2.13	-	G	ko:K11645	ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	COG COG1830 DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes
APKMJDPJ_02154	0.0	-	-	-	T	-	-	-	COG COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
APKMJDPJ_02155	0.0	-	3.2.1.52	GH20	G	ko:K12373	ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142	ko00000,ko00001,ko00002,ko01000,ko03110	Glycosyl hydrolase family 20, catalytic domain
APKMJDPJ_02156	0.0	-	-	-	P	-	-	-	Arylsulfatase
APKMJDPJ_02157	0.0	betC_2	-	-	P	-	-	-	COG COG3119 Arylsulfatase A and related enzymes
APKMJDPJ_02158	0.0	-	3.2.1.52	GH20	G	ko:K12373	ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142	ko00000,ko00001,ko00002,ko01000,ko03110	Glycosyl hydrolase family 20, catalytic domain
APKMJDPJ_02159	0.0	lacZ	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	COG3250 Beta-galactosidase beta-glucuronidase
APKMJDPJ_02160	0.0	-	3.2.1.51	GH29	G	ko:K01206	ko00511,map00511	ko00000,ko00001,ko01000,ko04147	F5 8 type C domain protein
APKMJDPJ_02161	2.61e-155	tal	2.2.1.2	-	F	ko:K00616,ko:K08314	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
APKMJDPJ_02162	1.05e-274	ybdG_1	-	-	M	ko:K16053	-	ko00000,ko02000	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_02163	3.26e-253	-	-	-	S	-	-	-	Endonuclease Exonuclease phosphatase family
APKMJDPJ_02164	0.0	pepD_1	-	-	E	ko:K01270	ko00480,ko01100,map00480,map01100	ko00000,ko00001,ko01000,ko01002	Psort location Cytoplasmic, score 8.96
APKMJDPJ_02165	2.33e-43	-	-	-	S	-	-	-	COG NOG35566 non supervised orthologous group
APKMJDPJ_02166	1.69e-129	-	-	-	M	ko:K06142	-	ko00000	membrane
APKMJDPJ_02167	1.72e-214	-	-	-	KT	-	-	-	LytTr DNA-binding domain
APKMJDPJ_02168	0.0	-	-	-	H	-	-	-	TonB-dependent receptor plug domain
APKMJDPJ_02169	2.96e-91	-	-	-	S	-	-	-	protein conserved in bacteria
APKMJDPJ_02170	2.96e-72	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
APKMJDPJ_02171	4.51e-65	-	-	-	D	-	-	-	Septum formation initiator
APKMJDPJ_02172	0.0	dnaX	2.7.7.7	-	H	ko:K02343	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
APKMJDPJ_02173	7.03e-149	-	-	-	S	-	-	-	Putative auto-transporter adhesin, head GIN domain
APKMJDPJ_02174	0.0	-	-	-	P	-	-	-	TonB-dependent Receptor Plug Domain
APKMJDPJ_02175	2.06e-300	-	-	-	S	-	-	-	Protein of unknown function (DUF4876)
APKMJDPJ_02176	0.0	-	-	-	-	-	-	-	-
APKMJDPJ_02177	1.16e-128	-	-	-	-	-	-	-	-
APKMJDPJ_02178	2.28e-138	-	-	-	S	ko:K09939	-	ko00000	Putative PepSY_TM-like
APKMJDPJ_02179	6.8e-219	-	-	-	V	ko:K01990,ko:K19340	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG1131 ABC-type multidrug transport system ATPase component
APKMJDPJ_02180	1.28e-153	-	-	-	-	-	-	-	-
APKMJDPJ_02181	5.62e-253	-	-	-	S	-	-	-	Domain of unknown function (DUF4857)
APKMJDPJ_02183	3.79e-273	-	-	-	M	ko:K07282	-	ko00000	Bacterial capsule synthesis protein
APKMJDPJ_02184	0.0	-	-	-	CO	-	-	-	Redoxin
APKMJDPJ_02185	3.89e-208	folD	1.5.1.5, 3.5.4.9	-	F	ko:K01491	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
APKMJDPJ_02186	7.3e-270	-	-	-	CO	-	-	-	Thioredoxin
APKMJDPJ_02187	1.41e-302	ffh	3.6.5.4	-	U	ko:K03106	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko01000,ko02044	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
APKMJDPJ_02188	2.42e-299	-	-	-	V	-	-	-	MATE efflux family protein
APKMJDPJ_02189	0.0	-	-	-	T	-	-	-	COG0642 Signal transduction histidine kinase
APKMJDPJ_02190	0.0	-	-	-	T	-	-	-	ATPase histidine kinase DNA gyrase B HSP90 domain protein
APKMJDPJ_02191	0.0	rho	-	-	K	ko:K03628	ko03018,map03018	ko00000,ko00001,ko03019,ko03021	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
APKMJDPJ_02192	2.12e-182	-	-	-	C	-	-	-	4Fe-4S binding domain
APKMJDPJ_02193	2.16e-68	-	-	-	S	ko:K00389	-	ko00000	Domain of unknown function (DUF202)
APKMJDPJ_02194	2.22e-207	-	-	-	S	ko:K07058	-	ko00000	Virulence factor BrkB
APKMJDPJ_02195	0.0	amyS	3.2.1.1	GH13	G	ko:K01176	ko00500,ko01100,ko04973,map00500,map01100,map04973	ko00000,ko00001,ko01000	Alpha-amylase domain
APKMJDPJ_02196	3.12e-252	fabH	2.3.1.180	-	I	ko:K00648	ko00061,ko01100,ko01212,map00061,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
APKMJDPJ_02197	2.35e-242	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_02198	8.08e-171	-	-	-	C	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_02199	2.54e-96	-	-	-	-	-	-	-	-
APKMJDPJ_02201	9.97e-114	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_02202	2.12e-183	-	-	-	S	-	-	-	COG NOG34011 non supervised orthologous group
APKMJDPJ_02203	2.74e-125	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
APKMJDPJ_02204	1.3e-99	smpB	-	-	J	ko:K03664	-	ko00000	the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
APKMJDPJ_02205	0.0	metH	2.1.1.13	-	E	ko:K00548	ko00270,ko00450,ko00670,ko01100,ko01110,ko01230,map00270,map00450,map00670,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Psort location Cytoplasmic, score
APKMJDPJ_02206	4.37e-141	-	-	-	C	-	-	-	COG0778 Nitroreductase
APKMJDPJ_02207	1.37e-22	-	-	-	-	-	-	-	-
APKMJDPJ_02208	0.0	-	-	-	E	ko:K03307	-	ko00000	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
APKMJDPJ_02209	0.0	mltF	-	-	M	ko:K18691	-	ko00000,ko01000,ko01011	soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein
APKMJDPJ_02210	5.97e-145	udk	2.7.1.48	-	F	ko:K00876	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	Psort location Cytoplasmic, score
APKMJDPJ_02211	2.95e-65	-	-	-	S	-	-	-	Stress responsive A B barrel domain protein
APKMJDPJ_02212	0.0	dsbD	1.8.1.8	-	CO	ko:K04084	-	ko00000,ko01000,ko03110	cytochrome c biogenesis protein transmembrane region
APKMJDPJ_02213	1.07e-176	-	-	-	S	ko:K06911	-	ko00000	Belongs to the pirin family
APKMJDPJ_02214	1.27e-119	-	-	-	Q	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_02215	2.31e-195	hisG	2.4.2.17	-	F	ko:K00765	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	ATP phosphoribosyltransferase
APKMJDPJ_02216	1.11e-298	hisD	1.1.1.23	-	E	ko:K00013	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
APKMJDPJ_02217	2.48e-253	hisC	2.6.1.9	-	E	ko:K00817	ko00340,ko00350,ko00360,ko00400,ko00401,ko00960,ko01100,ko01110,ko01130,ko01230,map00340,map00350,map00360,map00400,map00401,map00960,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
APKMJDPJ_02218	4.31e-280	hisB	3.1.3.15, 4.2.1.19	-	E	ko:K01089,ko:K01693	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Histidine biosynthesis bifunctional protein HisB
APKMJDPJ_02219	1.47e-244	-	-	-	S	-	-	-	Calcineurin-like phosphoesterase
APKMJDPJ_02220	4.81e-294	-	-	-	H	-	-	-	Susd and RagB outer membrane lipoprotein
APKMJDPJ_02221	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
APKMJDPJ_02222	1.89e-117	-	-	-	-	-	-	-	-
APKMJDPJ_02223	0.0	nadE	6.3.5.1	-	H	ko:K01950	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
APKMJDPJ_02224	0.0	-	3.4.15.5	-	E	ko:K01284	-	ko00000,ko01000,ko01002	Peptidase family M3
APKMJDPJ_02225	3.06e-79	-	-	-	S	-	-	-	Protein of unknown function (DUF805)
APKMJDPJ_02226	2.88e-98	fur	-	-	P	ko:K03711,ko:K09825	-	ko00000,ko03000	Belongs to the Fur family
APKMJDPJ_02227	1.68e-137	rbr3A	-	-	C	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_02228	2.06e-144	-	-	-	C	-	-	-	Nitroreductase family
APKMJDPJ_02229	6.14e-105	-	-	-	O	-	-	-	Thioredoxin
APKMJDPJ_02230	3.33e-66	-	-	-	O	ko:K03671	ko04621,ko05418,map04621,map05418	ko00000,ko00001,ko03110	Psort location Cytoplasmic, score
APKMJDPJ_02231	1.21e-203	-	-	-	S	-	-	-	Calcineurin-like phosphoesterase superfamily domain
APKMJDPJ_02232	4.62e-275	-	-	-	M	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_02233	2.6e-37	-	-	-	-	-	-	-	-
APKMJDPJ_02234	0.0	-	-	-	S	-	-	-	COG NOG06390 non supervised orthologous group
APKMJDPJ_02235	0.0	dpp11	-	-	E	-	-	-	COG NOG04781 non supervised orthologous group
APKMJDPJ_02236	0.0	atsB	-	-	C	ko:K06871	-	ko00000	COG0641 Arylsulfatase regulator (Fe-S oxidoreductase)
APKMJDPJ_02237	8.62e-166	-	-	-	CO	-	-	-	Domain of unknown function (DUF4369)
APKMJDPJ_02238	0.0	-	-	-	S	-	-	-	Tetratricopeptide repeat protein
APKMJDPJ_02239	1.19e-80	-	-	-	S	-	-	-	Domain of unknown function (DUF3244)
APKMJDPJ_02240	1.14e-224	-	-	-	-	-	-	-	-
APKMJDPJ_02242	5.31e-268	-	-	-	S	-	-	-	TolB-like 6-blade propeller-like
APKMJDPJ_02244	4.63e-10	-	-	-	S	-	-	-	NVEALA protein
APKMJDPJ_02245	5.34e-245	-	-	-	S	-	-	-	TolB-like 6-blade propeller-like
APKMJDPJ_02246	8.33e-257	-	-	-	-	-	-	-	-
APKMJDPJ_02247	3.63e-215	-	-	-	S	-	-	-	protein BT4048 SWALL AAO79153 (EMBL AE016943) (373 aa) fasta scores E()
APKMJDPJ_02249	3.19e-286	-	-	-	-	-	-	-	-
APKMJDPJ_02251	0.0	-	-	-	E	-	-	-	non supervised orthologous group
APKMJDPJ_02252	0.0	-	-	-	E	-	-	-	non supervised orthologous group
APKMJDPJ_02253	9.37e-258	-	-	-	S	-	-	-	TolB-like 6-blade propeller-like
APKMJDPJ_02254	3.94e-133	-	-	-	-	-	-	-	-
APKMJDPJ_02255	1.44e-255	-	-	-	S	-	-	-	TolB-like 6-blade propeller-like
APKMJDPJ_02256	5.01e-226	-	3.4.21.89	-	U	ko:K03100	ko02024,ko03060,map02024,map03060	ko00000,ko00001,ko01000,ko01002	Belongs to the peptidase S26 family
APKMJDPJ_02257	0.0	-	-	-	M	-	-	-	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_02258	3.95e-251	-	-	-	M	-	-	-	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
APKMJDPJ_02259	0.0	-	-	-	V	-	-	-	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
APKMJDPJ_02260	0.0	-	-	-	MU	-	-	-	Psort location OuterMembrane, score
APKMJDPJ_02261	0.0	-	-	-	V	-	-	-	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
APKMJDPJ_02262	3.87e-181	plsC	2.3.1.51	-	I	ko:K00655	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family
APKMJDPJ_02263	8.68e-296	sbcD	-	-	L	ko:K03547	-	ko00000,ko03400	SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity
APKMJDPJ_02264	0.0	sbcC	-	-	L	ko:K03546	-	ko00000,ko03400	COG0419 ATPase involved in DNA repair
APKMJDPJ_02265	0.0	-	-	-	V	ko:K06147	-	ko00000,ko02000	COG1132 ABC-type multidrug transport system, ATPase and permease components
APKMJDPJ_02266	0.0	-	-	-	V	ko:K06147	-	ko00000,ko02000	COG1132 ABC-type multidrug transport system, ATPase and permease components
APKMJDPJ_02267	4.07e-292	-	-	-	S	ko:K07098	-	ko00000	Ser Thr phosphatase family protein
APKMJDPJ_02268	2.02e-138	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
APKMJDPJ_02269	2.12e-101	-	-	-	K	ko:K03088	-	ko00000,ko03021	Belongs to the sigma-70 factor family. ECF subfamily
APKMJDPJ_02270	4.45e-114	-	-	-	S	-	-	-	Domain of unknown function (DUF1905)
APKMJDPJ_02271	6.85e-107	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 9.46
APKMJDPJ_02272	3.53e-05	Dcc	-	-	N	-	-	-	Periplasmic Protein
APKMJDPJ_02273	3.78e-204	-	-	-	P	-	-	-	Outer membrane protein beta-barrel domain
APKMJDPJ_02274	3.93e-218	-	-	-	S	-	-	-	Outer membrane protein beta-barrel domain
APKMJDPJ_02275	9.65e-220	-	-	-	M	-	-	-	COG NOG19089 non supervised orthologous group
APKMJDPJ_02276	5.67e-231	metH_2	-	-	E	-	-	-	Vitamin B12 dependent methionine synthase, activation domain
APKMJDPJ_02277	8.78e-67	-	-	-	S	-	-	-	23S rRNA-intervening sequence protein
APKMJDPJ_02278	0.0	pyrC	3.5.2.3	-	F	ko:K01465	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Psort location Cytoplasmic, score
APKMJDPJ_02279	8.08e-184	dpm1	2.4.1.83	GT2	S	ko:K00721	ko00510,ko01100,map00510,map01100	ko00000,ko00001,ko01000,ko01003	b-glycosyltransferase, glycosyltransferase family 2 protein
APKMJDPJ_02280	0.0	mfd	-	-	L	ko:K03723	ko03420,map03420	ko00000,ko00001,ko01000,ko03400	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
APKMJDPJ_02281	0.0	-	-	-	C	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_02282	2.39e-108	-	-	-	S	ko:K09793	-	ko00000	Psort location CytoplasmicMembrane, score
APKMJDPJ_02283	9.54e-78	-	-	-	-	-	-	-	-
APKMJDPJ_02284	1.11e-45	-	-	-	O	-	-	-	Belongs to the sulfur carrier protein TusA family
APKMJDPJ_02285	2.16e-68	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_02288	0.0	xly	-	-	M	-	-	-	fibronectin type III domain protein
APKMJDPJ_02289	1.27e-173	-	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Pfam:Y_phosphatase3C
APKMJDPJ_02290	0.0	nagB	3.5.99.6	-	G	ko:K02564	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Psort location Cytoplasmic, score 8.96
APKMJDPJ_02291	1.03e-285	-	3.5.1.25	-	G	ko:K01443	ko00520,ko01130,map00520,map01130	ko00000,ko00001,ko01000	Belongs to the metallo-dependent hydrolases superfamily. NagA family
APKMJDPJ_02292	5.5e-194	ramA_1	3.5.1.3	-	S	ko:K13566	ko00250,map00250	ko00000,ko00001,ko01000	hydrolase, carbon-nitrogen family
APKMJDPJ_02293	3.97e-136	-	-	-	I	-	-	-	Acyltransferase
APKMJDPJ_02294	1.23e-57	-	-	-	S	-	-	-	COG NOG23371 non supervised orthologous group
APKMJDPJ_02295	0.0	-	-	-	M	ko:K07001	-	ko00000	Phospholipase, patatin family
APKMJDPJ_02296	1.1e-275	-	-	-	M	ko:K03585	ko01501,ko01503,map01501,map01503	ko00000,ko00001,ko00002,ko01504,ko02000,ko03036	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
APKMJDPJ_02297	0.0	-	-	-	V	-	-	-	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
APKMJDPJ_02298	0.0	-	-	-	M	ko:K18139,ko:K18300	ko01501,ko02024,map01501,map02024	ko00000,ko00001,ko00002,ko01504,ko02000	Efflux transporter, outer membrane factor lipoprotein, NodT family
APKMJDPJ_02299	2.94e-107	-	-	-	K	ko:K03088	-	ko00000,ko03021	ECF sigma factor
APKMJDPJ_02302	4.26e-158	-	-	-	PT	-	-	-	COG NOG28383 non supervised orthologous group
APKMJDPJ_02303	0.0	-	-	-	H	-	-	-	TonB-linked outer membrane protein, SusC RagA family
APKMJDPJ_02304	0.0	-	-	-	P	ko:K21572	-	ko00000,ko02000	non supervised orthologous group
APKMJDPJ_02305	6.25e-217	-	-	-	S	-	-	-	Domain of unknown function (DUF4959)
APKMJDPJ_02307	0.0	-	-	-	E	-	-	-	COG NOG04153 non supervised orthologous group
APKMJDPJ_02308	0.0	pfp	2.7.1.11, 2.7.1.90	-	H	ko:K00895,ko:K21071	ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130	ko00000,ko00001,ko01000	Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions
APKMJDPJ_02309	0.0	-	-	-	G	-	-	-	BNR repeat-like domain
APKMJDPJ_02310	1.33e-195	acm	-	-	M	ko:K07273	-	ko00000	phage tail component domain protein
APKMJDPJ_02311	0.0	-	-	-	M	ko:K07071	-	ko00000	Domain of unknown function (DUF1731)
APKMJDPJ_02312	1.24e-56	-	-	-	S	ko:K06975	-	ko00000	GCN5-related N-acetyl-transferase
APKMJDPJ_02313	2.76e-63	-	-	-	S	-	-	-	COG NOG23408 non supervised orthologous group
APKMJDPJ_02314	1.46e-201	-	-	-	K	-	-	-	COG COG2207 AraC-type DNA-binding domain-containing proteins
APKMJDPJ_02315	5.07e-181	-	-	-	S	-	-	-	Oxidoreductase, short chain dehydrogenase reductase family protein
APKMJDPJ_02316	3.12e-272	bcr	-	-	EGP	ko:K03446,ko:K07552	-	ko00000,ko00002,ko02000	Psort location CytoplasmicMembrane, score
APKMJDPJ_02317	1.11e-163	-	-	-	K	-	-	-	helix_turn_helix, arabinose operon control protein
APKMJDPJ_02318	0.0	trkH	-	-	P	ko:K03498	-	ko00000,ko02000	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_02319	3.45e-68	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_02320	2.41e-207	-	-	-	EG	-	-	-	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_02321	9.02e-269	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_02322	3.5e-126	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_02323	0.0	-	-	-	S	-	-	-	Protein of unknown function (DUF3584)
APKMJDPJ_02324	2.05e-113	-	1.20.4.1	-	T	ko:K03741	-	ko00000,ko01000	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
APKMJDPJ_02326	7.73e-230	rlmF	2.1.1.181	-	J	ko:K06970	-	ko00000,ko01000,ko03009	Specifically methylates the adenine in position 1618 of 23S rRNA
APKMJDPJ_02327	1.3e-49	-	-	-	S	-	-	-	Protein of unknown function (DUF1294)
APKMJDPJ_02328	0.0	-	-	-	S	ko:K09124	-	ko00000	PD-(D/E)XK nuclease superfamily
APKMJDPJ_02329	0.0	-	-	-	V	-	-	-	to Escherichia coli 5-methylcytosine-specific restriction enzyme B McrB or RglB or B4346 SWALL MCRB_ECOLI (SWALL P15005) (459 aa) fasta scores E() 7.3e-21, 29.42 id in 333 aa, and to Bacillus cereus 5-methylcytosine-specific restriction related enzyme McrB SWALL Q9XBI7 (EMBL AJ007510) (343 aa) fasta scores E() 6e-14, 32.38 id in 281 aa
APKMJDPJ_02330	5.63e-89	mutT	3.6.1.55	-	L	ko:K03574	-	ko00000,ko01000,ko03400	NUDIX domain
APKMJDPJ_02332	5.56e-142	-	-	-	S	-	-	-	DJ-1/PfpI family
APKMJDPJ_02335	3.34e-139	-	-	-	K	ko:K03088	-	ko00000,ko03021	RNA polymerase sigma-70 factor
APKMJDPJ_02336	2.84e-241	-	-	-	PT	-	-	-	Domain of unknown function (DUF4974)
APKMJDPJ_02337	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
APKMJDPJ_02338	0.0	-	-	-	F	ko:K21572	-	ko00000,ko02000	Pfam:SusD
APKMJDPJ_02339	0.0	-	3.2.1.21	GH3	G	ko:K05349	ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110	ko00000,ko00001,ko01000	glycosyl hydrolase, family 3
APKMJDPJ_02340	6.99e-316	-	-	-	H	-	-	-	to Methylobacterium sp. CmuC protein SWALL Q9X7G6 (EMBL AJ011317) (378 aa) fasta scores E()
APKMJDPJ_02341	3.41e-143	-	-	-	E	-	-	-	B12 binding domain
APKMJDPJ_02342	1.94e-141	-	-	-	E	-	-	-	Vitamin B12 dependent methionine synthase, activation domain protein
APKMJDPJ_02343	1.04e-244	-	4.1.1.37	-	H	ko:K01599	ko00860,ko01100,ko01110,map00860,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Uroporphyrinogen decarboxylase (URO-D)
APKMJDPJ_02344	0.0	-	3.2.1.21	GH3	G	ko:K05349	ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110	ko00000,ko00001,ko01000	glycosyl hydrolase, family 3
APKMJDPJ_02345	0.0	-	3.2.1.55	GH51	G	ko:K01209	ko00520,map00520	ko00000,ko00001,ko01000	Right handed beta helix region
APKMJDPJ_02346	9.84e-194	-	-	-	K	-	-	-	transcriptional regulator (AraC family)
APKMJDPJ_02347	4.42e-84	-	-	-	S	ko:K06996	-	ko00000	Glyoxalase-like domain
APKMJDPJ_02348	7.26e-203	-	-	-	K	-	-	-	Helix-turn-helix domain
APKMJDPJ_02349	1.71e-99	-	-	-	K	-	-	-	stress protein (general stress protein 26)
APKMJDPJ_02350	0.0	-	-	-	S	-	-	-	Protein of unknown function (DUF1524)
APKMJDPJ_02354	1.04e-141	hisH	-	-	E	ko:K02501	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
APKMJDPJ_02355	3.84e-172	hisA	5.3.1.16	-	E	ko:K01814	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
APKMJDPJ_02356	6.12e-179	hisF	-	-	E	ko:K02500	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
APKMJDPJ_02357	4.05e-147	hisI	3.5.4.19, 3.6.1.31	-	E	ko:K11755	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	belongs to the PRA-CH family
APKMJDPJ_02358	2.7e-164	ftsE	-	-	D	ko:K09812	ko02010,map02010	ko00000,ko00001,ko00002,ko02000,ko03036	Psort location CytoplasmicMembrane, score 7.88
APKMJDPJ_02359	0.0	lysC	2.7.2.4	-	E	ko:K00928	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the aspartokinase family
APKMJDPJ_02360	2e-287	lysA	4.1.1.20	-	E	ko:K01586	ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
APKMJDPJ_02361	6.59e-111	ftnA	1.16.3.2	-	P	ko:K02217	-	ko00000,ko01000	Iron-storage protein
APKMJDPJ_02362	6.35e-201	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
APKMJDPJ_02365	0.0	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_02366	5.31e-82	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_02367	1.98e-220	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
APKMJDPJ_02368	1.65e-85	-	-	-	-	-	-	-	-
APKMJDPJ_02369	4.82e-137	-	-	-	M	-	-	-	Protein of unknown function (DUF3575)
APKMJDPJ_02370	0.0	-	-	-	M	-	-	-	COG NOG23378 non supervised orthologous group
APKMJDPJ_02371	7.65e-221	-	-	-	S	-	-	-	Major fimbrial subunit protein type IV, Fimbrillin, C-terminal
APKMJDPJ_02372	2e-85	-	-	-	S	-	-	-	Major fimbrial subunit protein type IV, Fimbrillin, C-terminal
APKMJDPJ_02373	5.9e-259	-	-	-	S	-	-	-	Fimbrillin-A associated anchor proteins Mfa1 and Mfa2
APKMJDPJ_02374	0.0	-	-	-	-	-	-	-	-
APKMJDPJ_02375	1.28e-233	-	-	-	-	-	-	-	-
APKMJDPJ_02376	0.0	-	-	-	-	-	-	-	-
APKMJDPJ_02377	1.01e-249	-	-	-	S	-	-	-	Fimbrillin-like
APKMJDPJ_02378	1.38e-216	-	-	-	S	-	-	-	Domain of unknown function (DUF4906)
APKMJDPJ_02379	2.72e-50	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
APKMJDPJ_02380	6.95e-199	kbl	2.3.1.29	-	H	ko:K00639	ko00260,map00260	ko00000,ko00001,ko01000,ko01007	Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA
APKMJDPJ_02381	1.76e-232	ltd	-	-	M	-	-	-	NAD dependent epimerase dehydratase family
APKMJDPJ_02382	2.72e-207	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_02383	4.4e-245	murB	1.3.1.98	-	M	ko:K00075	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation
APKMJDPJ_02384	2.15e-189	lipB	3.1.4.55	-	S	ko:K06167	ko00440,map00440	ko00000,ko00001,ko01000	Psort location Cytoplasmic, score 8.96
APKMJDPJ_02385	0.0	-	-	-	S	-	-	-	COG NOG25407 non supervised orthologous group
APKMJDPJ_02386	3.08e-81	-	-	-	L	-	-	-	COG NOG19098 non supervised orthologous group
APKMJDPJ_02387	5.69e-260	dnaN	2.7.7.7	-	L	ko:K02338	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
APKMJDPJ_02388	1.76e-186	dnaQ	2.7.7.7	-	L	ko:K02342	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	COG0847 DNA polymerase III epsilon subunit and related 3'-5'
APKMJDPJ_02389	1.79e-286	coaBC	4.1.1.36, 6.3.2.5	-	H	ko:K13038	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
APKMJDPJ_02390	0.0	recN	-	-	L	ko:K03631	-	ko00000,ko03400	May be involved in recombinational repair of damaged DNA
APKMJDPJ_02391	4.83e-174	trmH	2.1.1.185	-	J	ko:K03218,ko:K03437	-	ko00000,ko01000,ko03009,ko03016	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
APKMJDPJ_02392	0.0	-	-	-	O	-	-	-	COG COG0457 FOG TPR repeat
APKMJDPJ_02393	3.08e-81	ridA	3.5.99.10	-	J	ko:K09022	-	ko00000,ko01000	endoribonuclease L-PSP
APKMJDPJ_02394	0.0	folC	6.3.2.12, 6.3.2.17	-	H	ko:K11754	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	Folylpolyglutamate synthase
APKMJDPJ_02395	0.0	ybeZ_1	-	-	T	ko:K07175	-	ko00000	ATPase related to phosphate starvation-inducible protein PhoH
APKMJDPJ_02396	0.0	wbpM	-	-	GM	-	-	-	Polysaccharide biosynthesis protein
APKMJDPJ_02397	4.33e-120	-	-	-	-	-	-	-	-
APKMJDPJ_02400	7.4e-275	-	3.1.3.3	-	T	ko:K07315	-	ko00000,ko01000,ko03021	Sigma factor PP2C-like phosphatases
APKMJDPJ_02401	4.14e-66	-	-	-	T	ko:K04749	-	ko00000,ko03021	STAS domain
APKMJDPJ_02402	2.39e-98	-	2.7.11.1	-	T	ko:K04757	-	ko00000,ko01000,ko01001,ko03021	Histidine kinase-like ATPase domain
APKMJDPJ_02403	0.0	-	-	-	M	-	-	-	WD40 repeats
APKMJDPJ_02404	0.0	-	-	-	T	-	-	-	luxR family
APKMJDPJ_02405	1.02e-196	-	-	-	T	-	-	-	GHKL domain
APKMJDPJ_02406	0.0	-	-	-	P	ko:K02014	-	ko00000,ko02000	TonB-dependent Receptor Plug Domain
APKMJDPJ_02407	0.0	-	-	-	Q	-	-	-	AMP-binding enzyme
APKMJDPJ_02410	4.02e-85	-	-	-	KT	-	-	-	LytTr DNA-binding domain
APKMJDPJ_02411	5.39e-193	-	-	-	S	-	-	-	Protein of unknown function (DUF2589)
APKMJDPJ_02412	5.39e-183	-	-	-	-	-	-	-	-
APKMJDPJ_02413	5.82e-111	-	-	-	S	-	-	-	Protein of unknown function (DUF2589)
APKMJDPJ_02414	9.71e-50	-	-	-	-	-	-	-	-
APKMJDPJ_02416	1.17e-77	yjcS	-	-	Q	ko:K01138	-	ko00000,ko01000	COG2015, Alkyl sulfatase and related hydrolases
APKMJDPJ_02417	1.7e-192	-	-	-	M	-	-	-	N-acetylmuramidase
APKMJDPJ_02418	9.74e-229	preA	1.3.98.1	-	F	ko:K00226	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of dihydroorotate to orotate
APKMJDPJ_02419	5.69e-161	yggS	-	-	S	ko:K06997	-	ko00000	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
APKMJDPJ_02420	6.92e-106	-	-	-	S	-	-	-	COG NOG14445 non supervised orthologous group
APKMJDPJ_02421	5.46e-154	-	-	-	S	-	-	-	Domain of unknown function (DUF4858)
APKMJDPJ_02422	3.86e-11	-	-	-	L	-	-	-	COG NOG19076 non supervised orthologous group
APKMJDPJ_02423	0.0	-	3.1.3.5, 3.6.1.45	-	F	ko:K11751	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	Bacterial capsule synthesis protein PGA_cap
APKMJDPJ_02424	7.35e-46	-	4.1.1.3	-	C	ko:K01573	ko00620,ko01100,map00620,map01100	ko00000,ko00001,ko01000,ko02000	Sodium pump decarboxylase gamma subunit
APKMJDPJ_02425	0.0	cfiA	6.4.1.1	-	C	ko:K01960	ko00020,ko00620,ko00720,ko01100,ko01120,ko01200,ko01230,map00020,map00620,map00720,map01100,map01120,map01200,map01230	ko00000,ko00001,ko00002,ko01000	COG5016 Pyruvate oxaloacetate carboxyltransferase
APKMJDPJ_02426	2.33e-184	-	4.1.1.3	-	C	ko:K01572	ko00620,ko01100,map00620,map01100	ko00000,ko00001,ko01000,ko02000	sodium ion-translocating decarboxylase, beta subunit
APKMJDPJ_02427	1.63e-260	manC	2.7.7.13	-	M	ko:K00971	ko00051,ko00520,ko01100,ko01110,map00051,map00520,map01100,map01110	ko00000,ko00001,ko00002,ko01000	mannose-1-phosphate guanylyltransferase
APKMJDPJ_02428	1.62e-105	-	-	-	G	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_02429	2.16e-264	-	-	-	M	-	-	-	OmpA family
APKMJDPJ_02430	1.09e-310	gldM	-	-	S	-	-	-	GldM C-terminal domain
APKMJDPJ_02431	1.6e-96	gldL	-	-	S	-	-	-	Gliding motility-associated protein, GldL
APKMJDPJ_02432	2.19e-136	-	-	-	-	-	-	-	-
APKMJDPJ_02433	2.27e-290	-	-	-	S	-	-	-	COG NOG33609 non supervised orthologous group
APKMJDPJ_02434	2.52e-301	-	-	-	-	-	-	-	-
APKMJDPJ_02435	2.74e-164	-	-	-	I	-	-	-	Exopolysaccharide biosynthesis protein YbjH
APKMJDPJ_02436	1.98e-174	-	2.4.1.187	GT26	M	ko:K05946	ko05111,map05111	ko00000,ko00001,ko01000,ko01003	Belongs to the glycosyltransferase 26 family
APKMJDPJ_02437	2e-308	-	-	-	M	-	-	-	Glycosyl transferases group 1
APKMJDPJ_02438	8.16e-287	-	-	-	S	-	-	-	Polysaccharide pyruvyl transferase
APKMJDPJ_02439	2.65e-315	-	-	-	C	-	-	-	Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus
APKMJDPJ_02440	1.89e-256	-	-	-	M	-	-	-	Glycosyl transferases group 1
APKMJDPJ_02441	4.44e-134	-	2.3.1.30	-	E	ko:K00640	ko00270,ko00920,ko01100,ko01110,ko01120,ko01200,ko01230,ko05111,map00270,map00920,map01100,map01110,map01120,map01200,map01230,map05111	ko00000,ko00001,ko00002,ko01000	Bacterial transferase hexapeptide (six repeats)
APKMJDPJ_02442	3.28e-260	-	-	-	S	-	-	-	Acyltransferase family
APKMJDPJ_02443	6.29e-250	-	-	-	S	-	-	-	Glycosyltransferase like family 2
APKMJDPJ_02444	5.71e-283	-	-	-	S	-	-	-	EpsG family
APKMJDPJ_02445	2.16e-184	-	-	-	M	-	-	-	Glycosyl transferases group 1
APKMJDPJ_02446	2.69e-133	-	2.3.1.30	-	E	ko:K00640	ko00270,ko00920,ko01100,ko01110,ko01120,ko01200,ko01230,ko05111,map00270,map00920,map01100,map01110,map01120,map01200,map01230,map05111	ko00000,ko00001,ko00002,ko01000	Bacterial transferase hexapeptide (six repeats)
APKMJDPJ_02447	2.16e-239	-	-	-	M	-	-	-	Glycosyltransferase like family 2
APKMJDPJ_02448	3.62e-247	-	-	-	S	-	-	-	Glycosyltransferase like family 2
APKMJDPJ_02449	2.02e-271	-	-	-	M	-	-	-	Glycosyltransferase like family 2
APKMJDPJ_02450	1.08e-268	-	-	-	C	-	-	-	Polysaccharide pyruvyl transferase
APKMJDPJ_02451	9.64e-295	-	-	-	C	-	-	-	coenzyme F420-reducing hydrogenase beta subunit
APKMJDPJ_02452	1.54e-247	-	-	-	S	-	-	-	Acyltransferase family
APKMJDPJ_02453	0.0	-	-	-	V	-	-	-	COG NOG25117 non supervised orthologous group
APKMJDPJ_02454	5.09e-119	-	-	-	K	-	-	-	KOW (Kyprides, Ouzounis, Woese) motif.
APKMJDPJ_02456	0.0	-	-	-	L	-	-	-	Protein of unknown function (DUF3987)
APKMJDPJ_02457	4.84e-54	-	-	-	S	-	-	-	Domain of unknown function (DUF4248)
APKMJDPJ_02458	1.85e-99	-	-	-	L	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_02459	7.86e-114	-	3.5.1.28	-	V	ko:K01447	-	ko00000,ko01000	Psort location Cytoplasmic, score 8.96
APKMJDPJ_02460	0.0	ptk_3	-	-	DM	-	-	-	Chain length determinant protein
APKMJDPJ_02461	5.62e-181	-	-	-	M	ko:K01991	ko02026,map02026	ko00000,ko00001,ko02000	COG1596 Periplasmic protein involved in polysaccharide export
APKMJDPJ_02462	0.0	wcaJ_2	2.7.8.6	-	M	ko:K00996,ko:K03606	ko05111,map05111	ko00000,ko00001,ko01000,ko01005	Psort location CytoplasmicMembrane, score
APKMJDPJ_02463	7.85e-265	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
APKMJDPJ_02464	2.62e-131	-	-	-	L	-	-	-	COG COG1961 Site-specific recombinases, DNA invertase Pin homologs
APKMJDPJ_02465	6.47e-130	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_02466	2.01e-113	tpx	1.11.1.15	-	O	ko:K11065	-	ko00000,ko01000	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
APKMJDPJ_02467	2.52e-142	-	-	-	S	-	-	-	Domain of unknown function (DUF4840)
APKMJDPJ_02468	4.02e-152	dedA	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
APKMJDPJ_02469	0.0	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_02470	0.0	glnS	6.1.1.18	-	J	ko:K01886	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Glutamine--tRNA ligase
APKMJDPJ_02471	2.06e-198	pstS	-	-	P	ko:K02040	ko02010,ko02020,ko05152,map02010,map02020,map05152	ko00000,ko00001,ko00002,ko02000	COG0226 ABC-type phosphate transport system, periplasmic component
APKMJDPJ_02472	7.09e-273	pstC	-	-	P	ko:K02037	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	probably responsible for the translocation of the substrate across the membrane
APKMJDPJ_02473	1.7e-201	pstA	-	-	P	ko:K02038	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_02474	5.66e-181	pstB	3.6.3.27	-	P	ko:K02036	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
APKMJDPJ_02475	1.95e-151	phoU	-	-	P	ko:K02039	-	ko00000	Plays a role in the regulation of phosphate uptake
APKMJDPJ_02477	5.99e-143	ribE	2.5.1.9	-	H	ko:K00793	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	COG0307 Riboflavin synthase alpha chain
APKMJDPJ_02478	2.69e-122	-	-	-	C	-	-	-	Nitroreductase family
APKMJDPJ_02479	2.67e-307	yihY	-	-	S	ko:K07058	-	ko00000	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_02480	8.34e-298	ykfC	-	-	M	-	-	-	NlpC P60 family protein
APKMJDPJ_02481	2.87e-269	ykfB	5.1.1.20, 5.1.1.3	-	M	ko:K01776,ko:K19802	ko00471,ko01100,map00471,map01100	ko00000,ko00001,ko01000,ko01011	Belongs to the mandelate racemase muconate lactonizing enzyme family
APKMJDPJ_02482	0.0	-	-	-	E	-	-	-	Transglutaminase-like
APKMJDPJ_02483	0.0	htrA	-	-	O	-	-	-	Psort location Periplasmic, score
APKMJDPJ_02484	2.19e-190	rpoD	-	-	K	ko:K03086	-	ko00000,ko03021	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
APKMJDPJ_02485	2.1e-90	-	-	-	S	-	-	-	COG NOG31446 non supervised orthologous group
APKMJDPJ_02486	1.32e-285	-	-	-	Q	-	-	-	Clostripain family
APKMJDPJ_02487	8.44e-200	-	-	-	S	-	-	-	COG NOG14441 non supervised orthologous group
APKMJDPJ_02488	8.94e-100	-	-	-	S	-	-	-	COG NOG14442 non supervised orthologous group
APKMJDPJ_02489	4.53e-300	qseC	-	-	T	-	-	-	Psort location CytoplasmicMembrane, score
APKMJDPJ_02490	4.65e-157	-	-	-	K	-	-	-	COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
APKMJDPJ_02491	1.06e-280	-	3.5.1.25	-	G	ko:K01443	ko00520,ko01130,map00520,map01130	ko00000,ko00001,ko01000	Belongs to the metallo-dependent hydrolases superfamily. NagA family
APKMJDPJ_02493	2.04e-170	-	-	-	S	ko:K02651	ko04112,map04112	ko00000,ko00001,ko02035,ko02044	COG NOG28004 non supervised orthologous group
APKMJDPJ_02494	1.85e-239	pabB	2.6.1.85	-	EH	ko:K01665	ko00790,map00790	ko00000,ko00001,ko01000	COG COG0147 Anthranilate para-aminobenzoate synthases component I
APKMJDPJ_02495	6.25e-144	-	4.1.3.38	-	EH	ko:K02619	ko00790,map00790	ko00000,ko00001,ko01000	Psort location Cytoplasmic, score 8.96
APKMJDPJ_02496	1.52e-165	-	-	-	S	-	-	-	TIGR02453 family
APKMJDPJ_02497	0.0	glgB	2.4.1.18	CBM48,GH13	G	ko:K00700	ko00500,ko01100,ko01110,map00500,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko04147	1,4-alpha-glucan branching enzyme
APKMJDPJ_02498	0.0	amyA2	-	-	G	-	-	-	Alpha amylase, catalytic domain
APKMJDPJ_02499	1.02e-260	yvaA	1.1.1.371	-	S	ko:K16044	ko00562,ko01120,map00562,map01120	ko00000,ko00001,ko01000	Oxidoreductase family, C-terminal alpha/beta domain
APKMJDPJ_02500	7.45e-193	-	-	-	S	ko:K07001	-	ko00000	esterase of the alpha-beta hydrolase superfamily
APKMJDPJ_02501	6.83e-274	fsr	-	-	G	ko:K08223	-	ko00000,ko02000	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_02502	0.0	glnA	6.3.1.2	-	E	ko:K01915	ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727	ko00000,ko00001,ko01000,ko04147	Glutamate--ammonia ligase, catalytic domain protein
APKMJDPJ_02503	4.59e-139	-	-	-	T	-	-	-	COG COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
APKMJDPJ_02504	2.7e-171	-	-	-	S	-	-	-	Enoyl-(Acyl carrier protein) reductase
APKMJDPJ_02505	2.82e-133	-	-	-	I	-	-	-	PAP2 family
APKMJDPJ_02506	1.09e-42	-	-	-	S	-	-	-	Winged helix-turn-helix domain (DUF2582)
APKMJDPJ_02508	9.99e-29	-	-	-	-	-	-	-	-
APKMJDPJ_02509	2.69e-197	sucD	6.2.1.5	-	C	ko:K01902	ko00020,ko00640,ko00660,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00640,map00660,map00720,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
APKMJDPJ_02510	3.77e-269	sucC	6.2.1.5	-	F	ko:K01903	ko00020,ko00640,ko00660,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00640,map00660,map00720,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit
APKMJDPJ_02511	1.36e-209	fabD	2.3.1.39	-	I	ko:K00645	ko00061,ko00333,ko01100,ko01130,ko01212,map00061,map00333,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	malonyl CoA-acyl carrier protein transacylase
APKMJDPJ_02512	1.02e-195	thiD	2.7.1.49, 2.7.4.7	-	H	ko:K00941	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	COG0351 Hydroxymethylpyrimidine phosphomethylpyrimidine kinase
APKMJDPJ_02513	1.28e-172	-	-	-	F	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_02514	0.0	xylB_2	2.7.1.17	-	G	ko:K00854	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko00002,ko01000	Carbohydrate kinase, FGGY family protein
APKMJDPJ_02515	0.0	xylA	5.3.1.5	-	G	ko:K01805	ko00040,ko00051,ko01100,map00040,map00051,map01100	ko00000,ko00001,ko01000	Psort location Cytoplasmic, score
APKMJDPJ_02516	0.0	-	-	-	P	ko:K08138	-	ko00000,ko02000	Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family
APKMJDPJ_02517	8.82e-310	-	3.1.3.1	-	S	ko:K01113	ko00790,ko01100,ko02020,map00790,map01100,map02020	ko00000,ko00001,ko00002,ko01000	type I phosphodiesterase nucleotide pyrophosphatase
APKMJDPJ_02518	0.0	ramA_2	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_02519	3.46e-156	ahpC	1.11.1.15	-	O	ko:K03386	ko04214,map04214	ko00000,ko00001,ko01000,ko04147	Psort location Cytoplasmic, score
APKMJDPJ_02520	4.19e-50	-	-	-	S	-	-	-	RNA recognition motif
APKMJDPJ_02521	0.0	ccp	1.11.1.5	-	C	ko:K00428	-	ko00000,ko01000	Psort location Periplasmic, score
APKMJDPJ_02522	1.51e-189	ycf	-	-	O	-	-	-	COG COG0755 ABC-type transport system involved in cytochrome c biogenesis, permease component
APKMJDPJ_02523	3.47e-212	-	-	-	O	-	-	-	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_02524	1.26e-305	-	-	-	M	-	-	-	Peptidase family S41
APKMJDPJ_02525	1.42e-245	yhiM	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_02526	0.0	ileS	6.1.1.5	-	J	ko:K01870	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
APKMJDPJ_02527	5.93e-80	yocK	-	-	T	-	-	-	RNA polymerase-binding protein DksA
APKMJDPJ_02528	9.14e-152	lspA	3.4.23.36	-	MU	ko:K03101	ko03060,map03060	ko00000,ko00001,ko01000,ko01002	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
APKMJDPJ_02529	1.13e-214	-	-	-	S	-	-	-	COG NOG25370 non supervised orthologous group
APKMJDPJ_02530	1.56e-76	-	-	-	-	-	-	-	-
APKMJDPJ_02531	6.34e-178	aviRb	-	-	J	ko:K03437	-	ko00000,ko03016	RNA methyltransferase, TrmH
APKMJDPJ_02532	1.64e-114	-	-	-	M	-	-	-	Gram-negative bacterial TonB protein C-terminal
APKMJDPJ_02533	0.0	-	-	-	M	-	-	-	Outer membrane protein, OMP85 family
APKMJDPJ_02534	4.27e-126	-	-	-	S	-	-	-	COG NOG23374 non supervised orthologous group
APKMJDPJ_02535	1.37e-94	-	-	-	S	ko:K15977	-	ko00000	Psort location CytoplasmicMembrane, score 9.46
APKMJDPJ_02538	4.01e-122	-	-	-	S	-	-	-	COG NOG28134 non supervised orthologous group
APKMJDPJ_02541	2.24e-285	-	-	-	P	ko:K07221	-	ko00000,ko02000	Phosphate-selective porin O and P
APKMJDPJ_02542	8.39e-279	-	-	-	S	ko:K08217	-	br01600,ko00000,ko01504,ko02000	Transmembrane secretion effector
APKMJDPJ_02544	3.31e-196	vicX	-	-	S	-	-	-	Metallo-beta-lactamase domain protein
APKMJDPJ_02545	0.0	dtpD	-	-	E	-	-	-	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_02546	0.0	uxaC	5.3.1.12	-	G	ko:K01812	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko00002,ko01000	glucuronate isomerase
APKMJDPJ_02547	7.18e-126	-	-	-	T	-	-	-	FHA domain protein
APKMJDPJ_02548	1.22e-248	-	-	-	S	-	-	-	Sporulation and cell division repeat protein
APKMJDPJ_02549	9.37e-129	rfbC	5.1.3.13	-	G	ko:K01790	ko00521,ko00523,ko01130,map00521,map00523,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
APKMJDPJ_02550	6.66e-316	ugd	1.1.1.22	-	C	ko:K00012	ko00040,ko00053,ko00520,ko01100,map00040,map00053,map00520,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
APKMJDPJ_02551	2.91e-196	-	-	-	S	-	-	-	COG NOG26711 non supervised orthologous group
APKMJDPJ_02552	4.46e-293	deaD	-	-	L	-	-	-	Belongs to the DEAD box helicase family
APKMJDPJ_02553	1.78e-216	serB	3.1.3.3	-	ET	ko:K01079	ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko01009	Psort location Cytoplasmic, score 8.96
APKMJDPJ_02554	2.05e-32	serB	3.1.3.3	-	ET	ko:K01079	ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko01009	Psort location Cytoplasmic, score 8.96
APKMJDPJ_02555	1.85e-115	-	-	-	O	-	-	-	COG NOG28456 non supervised orthologous group
APKMJDPJ_02556	2.66e-249	lptG	-	-	S	ko:K11720	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Permease, YjgP YjgQ family
APKMJDPJ_02557	4.5e-283	tgt	2.4.2.29	-	F	ko:K00773	-	ko00000,ko01000,ko03016	Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
APKMJDPJ_02558	0.0	lon	3.4.21.53	-	O	ko:K01338	ko04112,map04112	ko00000,ko00001,ko01000,ko01002	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
APKMJDPJ_02559	6.37e-170	smtA	2.1.1.223	-	J	ko:K15460	-	ko00000,ko01000,ko03016	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
APKMJDPJ_02562	3.54e-82	-	3.4.21.88	-	K	ko:K01356	-	ko00000,ko00002,ko01000,ko01002,ko03400	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
APKMJDPJ_02563	2.03e-91	-	-	-	-	-	-	-	-
APKMJDPJ_02564	1e-126	-	-	-	S	-	-	-	ORF6N domain
APKMJDPJ_02565	1.16e-112	-	-	-	-	-	-	-	-
APKMJDPJ_02570	2.4e-48	-	-	-	-	-	-	-	-
APKMJDPJ_02572	8.55e-91	-	-	-	G	-	-	-	UMP catabolic process
APKMJDPJ_02574	1.17e-101	-	-	-	S	-	-	-	COG NOG14445 non supervised orthologous group
APKMJDPJ_02580	6.98e-194	-	-	-	L	-	-	-	DnaD domain protein
APKMJDPJ_02581	3.97e-154	-	-	-	-	-	-	-	-
APKMJDPJ_02582	3.37e-09	-	-	-	-	-	-	-	-
APKMJDPJ_02583	1.8e-119	-	-	-	-	-	-	-	-
APKMJDPJ_02585	6.47e-208	-	-	-	OU	ko:K04773	-	ko00000,ko01000,ko01002	Peptidase family S49
APKMJDPJ_02586	0.0	-	-	-	-	-	-	-	-
APKMJDPJ_02587	4.54e-201	-	-	-	-	-	-	-	-
APKMJDPJ_02588	1.07e-214	-	-	-	-	-	-	-	-
APKMJDPJ_02589	5.56e-72	-	-	-	-	-	-	-	-
APKMJDPJ_02590	4.47e-155	-	-	-	-	-	-	-	-
APKMJDPJ_02591	0.0	-	-	-	-	-	-	-	-
APKMJDPJ_02592	3.34e-103	-	-	-	-	-	-	-	-
APKMJDPJ_02594	3.79e-62	-	-	-	-	-	-	-	-
APKMJDPJ_02595	0.0	-	-	-	-	-	-	-	-
APKMJDPJ_02597	3.2e-218	-	-	-	-	-	-	-	-
APKMJDPJ_02598	5.51e-199	-	-	-	-	-	-	-	-
APKMJDPJ_02599	3e-89	-	-	-	S	-	-	-	Peptidase M15
APKMJDPJ_02600	4.25e-103	-	-	-	-	-	-	-	-
APKMJDPJ_02601	4.17e-164	-	-	-	-	-	-	-	-
APKMJDPJ_02602	0.0	-	-	-	D	-	-	-	nuclear chromosome segregation
APKMJDPJ_02603	0.0	-	-	-	-	-	-	-	-
APKMJDPJ_02604	1.42e-288	-	-	-	-	-	-	-	-
APKMJDPJ_02605	7.75e-138	-	-	-	S	-	-	-	Putative binding domain, N-terminal
APKMJDPJ_02606	2.92e-63	-	-	-	S	-	-	-	Putative binding domain, N-terminal
APKMJDPJ_02607	2.47e-101	-	-	-	-	-	-	-	-
APKMJDPJ_02608	9.64e-68	-	-	-	-	-	-	-	-
APKMJDPJ_02610	2e-303	-	-	-	L	-	-	-	Phage integrase SAM-like domain
APKMJDPJ_02613	5.01e-15	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_02614	1.3e-08	-	-	-	S	-	-	-	Fimbrillin-like
APKMJDPJ_02615	4.75e-64	-	-	-	S	-	-	-	Protein of unknown function (DUF1622)
APKMJDPJ_02616	8.71e-06	-	-	-	-	-	-	-	-
APKMJDPJ_02617	9.55e-303	-	-	-	T	-	-	-	ATPase histidine kinase DNA gyrase B HSP90 domain protein
APKMJDPJ_02618	0.0	-	-	-	T	-	-	-	Sigma-54 interaction domain protein
APKMJDPJ_02619	0.0	-	-	-	MU	-	-	-	Psort location OuterMembrane, score
APKMJDPJ_02620	4.97e-273	-	-	-	M	ko:K02005	-	ko00000	Efflux transporter, RND family, MFP subunit
APKMJDPJ_02621	0.0	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_02622	0.0	-	-	-	V	-	-	-	MacB-like periplasmic core domain
APKMJDPJ_02623	0.0	-	-	-	V	-	-	-	MacB-like periplasmic core domain
APKMJDPJ_02624	0.0	-	-	-	V	-	-	-	MacB-like periplasmic core domain
APKMJDPJ_02625	0.0	-	-	-	V	-	-	-	Efflux ABC transporter, permease protein
APKMJDPJ_02626	0.0	-	-	-	V	-	-	-	Efflux ABC transporter, permease protein
APKMJDPJ_02627	1.02e-155	-	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	bacteriocin export ABC transporter, lactococcin 972 group
APKMJDPJ_02628	2.02e-10	-	-	-	CO	-	-	-	Antioxidant, AhpC TSA family
APKMJDPJ_02629	2.97e-288	bioF	2.3.1.29, 2.3.1.47	-	E	ko:K00639,ko:K00652	ko00260,ko00780,ko01100,map00260,map00780,map01100	ko00000,ko00001,ko00002,ko01000,ko01007	Beta-eliminating lyase
APKMJDPJ_02630	4.63e-249	-	-	-	I	-	-	-	lipid kinase, YegS Rv2252 BmrU family
APKMJDPJ_02631	0.0	aspS	6.1.1.12	-	J	ko:K01876	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
APKMJDPJ_02632	1.76e-86	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 9.46
APKMJDPJ_02633	1.32e-220	-	3.5.1.53	-	S	ko:K12251	ko00330,ko01100,map00330,map01100	ko00000,ko00001,ko01000	hydrolase, carbon-nitrogen family
APKMJDPJ_02634	1.05e-280	aguA	3.5.3.12	-	E	ko:K10536	ko00330,ko01100,map00330,map01100	ko00000,ko00001,ko01000	Psort location Cytoplasmic, score 8.96
APKMJDPJ_02635	9.45e-121	-	-	-	S	-	-	-	protein containing a ferredoxin domain
APKMJDPJ_02636	1.71e-145	-	3.6.3.21	-	V	ko:K02028,ko:K02068	-	ko00000,ko00002,ko01000,ko02000	ABC transporter
APKMJDPJ_02637	2.86e-175	-	-	-	S	ko:K02069	-	ko00000,ko00002,ko02000	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_02638	1.13e-58	-	-	-	-	-	-	-	-
APKMJDPJ_02639	5.26e-88	gloA	4.4.1.5	-	E	ko:K01759,ko:K03827	ko00620,map00620	ko00000,ko00001,ko01000	Psort location Cytoplasmic, score
APKMJDPJ_02640	5.09e-93	-	-	-	S	-	-	-	Domain of unknown function (DUF4891)
APKMJDPJ_02641	2.45e-267	yqfO	-	-	C	-	-	-	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
APKMJDPJ_02642	6.92e-92	-	-	-	S	ko:K07164	-	ko00000	Zinc ribbon domain protein
APKMJDPJ_02643	0.0	-	-	-	M	-	-	-	Efflux transporter, outer membrane factor lipoprotein, NodT family
APKMJDPJ_02644	6.73e-266	-	-	-	M	-	-	-	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
APKMJDPJ_02645	0.0	bpeF	-	-	V	ko:K03296	-	ko00000	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
APKMJDPJ_02646	3.34e-106	-	-	-	V	-	-	-	COG NOG14438 non supervised orthologous group
APKMJDPJ_02647	9.83e-189	amn	3.2.2.4	-	F	ko:K01241	ko00230,map00230	ko00000,ko00001,ko01000	COG COG0775 Nucleoside phosphorylase
APKMJDPJ_02648	4.04e-240	holA	2.7.7.7	-	L	ko:K02340	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	COG1466 DNA polymerase III, delta subunit
APKMJDPJ_02649	1.25e-102	-	-	-	K	-	-	-	COG NOG19093 non supervised orthologous group
APKMJDPJ_02651	2.82e-188	pyrK	-	-	C	ko:K02823	ko00240,ko01100,map00240,map01100	ko00000,ko00001	Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD( )
APKMJDPJ_02652	2.35e-214	pyrD	1.3.1.14, 1.3.98.1	-	F	ko:K00226,ko:K17828	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
APKMJDPJ_02653	1.45e-160	trmD	2.1.1.228	-	J	ko:K00554	-	ko00000,ko01000,ko03016	Belongs to the RNA methyltransferase TrmD family
APKMJDPJ_02654	0.0	ligA	6.5.1.2	-	L	ko:K01972	ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430	ko00000,ko00001,ko01000,ko03032,ko03400	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
APKMJDPJ_02655	2.74e-210	dapA	4.3.3.7	-	EM	ko:K01714	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
APKMJDPJ_02656	7.53e-150	cat	2.3.1.28	-	V	ko:K19271	-	br01600,ko00000,ko01000,ko01504	Chloramphenicol acetyltransferase
APKMJDPJ_02657	3.07e-90	-	-	-	S	-	-	-	YjbR
APKMJDPJ_02658	1.5e-232	-	-	-	S	-	-	-	Sulfatase-modifying factor enzyme 1
APKMJDPJ_02662	0.0	-	-	-	M	ko:K07001	-	ko00000	esterase of the alpha-beta hydrolase superfamily
APKMJDPJ_02663	0.0	htpG	-	-	T	ko:K04079	ko04141,ko04151,ko04217,ko04612,ko04621,ko04626,ko04657,ko04659,ko04914,ko04915,ko05200,ko05215,ko05418,map04141,map04151,map04217,map04612,map04621,map04626,map04657,map04659,map04914,map04915,map05200,map05215,map05418	ko00000,ko00001,ko01009,ko03029,ko03051,ko03110,ko04131,ko04147	ATPase histidine kinase DNA gyrase B HSP90 domain protein
APKMJDPJ_02664	0.0	clpC	-	-	O	ko:K03696	ko01100,map01100	ko00000,ko03110	Belongs to the ClpA ClpB family
APKMJDPJ_02665	0.0	gyrA	5.99.1.3	-	L	ko:K02469	-	ko00000,ko01000,ko03032,ko03400	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
APKMJDPJ_02666	1.86e-239	-	-	-	S	-	-	-	tetratricopeptide repeat
APKMJDPJ_02668	3.23e-270	uspA	-	-	T	-	-	-	COG0589 Universal stress protein UspA and related nucleotide-binding
APKMJDPJ_02669	2.22e-60	-	-	-	S	-	-	-	COG NOG19094 non supervised orthologous group
APKMJDPJ_02670	1.38e-189	batE	-	-	T	-	-	-	COG NOG22299 non supervised orthologous group
APKMJDPJ_02671	0.0	batD	-	-	S	-	-	-	COG NOG06393 non supervised orthologous group
APKMJDPJ_02672	1.81e-121	batC	-	-	S	-	-	-	Tetratricopeptide repeat protein
APKMJDPJ_02673	5.89e-234	batB	-	-	S	ko:K07114	-	ko00000,ko02000	Von Willebrand factor type A domain
APKMJDPJ_02674	3.53e-228	batA	-	-	S	ko:K07114	-	ko00000,ko02000	Von Willebrand factor type A domain
APKMJDPJ_02675	1.37e-247	-	-	-	O	-	-	-	Psort location CytoplasmicMembrane, score
APKMJDPJ_02676	9.53e-207	-	-	-	S	-	-	-	protein (some members contain a von Willebrand factor type A (vWA) domain)
APKMJDPJ_02677	6.83e-228	moxR	-	-	S	ko:K03924	-	ko00000,ko01000	ATPase family associated with various cellular activities (AAA)
APKMJDPJ_02678	2.6e-302	-	-	-	L	-	-	-	Bacterial DNA-binding protein
APKMJDPJ_02679	5.19e-60	himA	-	-	L	ko:K03530,ko:K04764	-	ko00000,ko03032,ko03036,ko03400	COG0776 Bacterial nucleoid DNA-binding protein
APKMJDPJ_02680	0.0	rimO	2.8.4.4	-	J	ko:K14441	-	ko00000,ko01000,ko03009	Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12
APKMJDPJ_02681	2.65e-219	ftsY	-	-	U	ko:K03110	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
APKMJDPJ_02682	5.37e-29	-	-	-	S	-	-	-	Domain of unknown function (DUF4295)
APKMJDPJ_02683	3.49e-36	rpmG	-	-	J	ko:K02913	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL33 family
APKMJDPJ_02684	1.99e-57	rpmB	-	-	J	ko:K02902	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL28 family
APKMJDPJ_02685	6.01e-287	cinA	3.5.1.42	-	S	ko:K03742,ko:K03743	ko00760,map00760	ko00000,ko00001,ko01000	Belongs to the CinA family
APKMJDPJ_02686	1.12e-246	tsaD	2.3.1.234	-	O	ko:K01409	-	ko00000,ko01000,ko03016	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
APKMJDPJ_02687	0.0	-	-	-	S	-	-	-	Psort location OuterMembrane, score 9.49
APKMJDPJ_02688	6.93e-88	yccF	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
APKMJDPJ_02689	0.0	proS	6.1.1.15	-	J	ko:K01881	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro)
APKMJDPJ_02691	6.65e-180	-	-	-	L	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_02692	0.0	-	-	-	M	ko:K08676	-	ko00000,ko01000,ko01002	Tricorn protease homolog
APKMJDPJ_02694	1.12e-120	cobU	2.7.1.156, 2.7.7.62	-	H	ko:K02231	ko00860,ko01100,map00860,map01100	ko00000,ko00001,ko00002,ko01000	bifunctional cobalamin biosynthesis protein
APKMJDPJ_02695	8.65e-254	cobT	2.4.2.21	-	F	ko:K00768	ko00860,ko01100,map00860,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6- dimethylbenzimidazole (DMB)
APKMJDPJ_02696	1.01e-171	cobS	2.7.8.26	-	H	ko:K02233	ko00860,ko01100,map00860,map01100	ko00000,ko00001,ko00002,ko01000	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
APKMJDPJ_02697	5.44e-132	cobC	3.1.3.73	-	G	ko:K02226	ko00860,ko01100,map00860,map01100	ko00000,ko00001,ko00002,ko01000	Psort location Cytoplasmic, score 8.96
APKMJDPJ_02698	1.45e-225	cobD	6.3.1.10	-	H	ko:K02227	ko00860,ko01100,map00860,map01100	ko00000,ko00001,ko00002,ko01000	Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
APKMJDPJ_02699	7.06e-249	-	4.1.1.81	-	E	ko:K04720	ko00860,map00860	ko00000,ko00001,ko01000	COG0079 Histidinol-phosphate aromatic aminotransferase and cobyric acid decarboxylase
APKMJDPJ_02700	0.0	cobQ	6.3.5.10	-	H	ko:K02232	ko00860,ko01100,map00860,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation
APKMJDPJ_02701	3.27e-185	-	-	-	-	-	-	-	-
APKMJDPJ_02702	1.52e-70	-	-	-	-	-	-	-	-
APKMJDPJ_02703	4.18e-71	-	-	-	S	-	-	-	ParE toxin of type II toxin-antitoxin system, parDE
APKMJDPJ_02704	1.74e-294	-	-	-	MU	-	-	-	Psort location OuterMembrane, score
APKMJDPJ_02705	1.17e-224	-	-	-	M	ko:K01993	-	ko00000	Auxiliary transport protein, membrane fusion protein
APKMJDPJ_02706	1.3e-267	-	-	-	CP	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 family transporter protein
APKMJDPJ_02707	5.52e-285	-	-	-	V	ko:K01992	-	ko00000,ko00002,ko02000	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_02708	0.0	-	-	-	T	-	-	-	PAS domain S-box protein
APKMJDPJ_02709	1.73e-135	-	-	-	S	-	-	-	ATP cob(I)alamin adenosyltransferase
APKMJDPJ_02710	0.0	cbiA	6.3.5.11, 6.3.5.9	-	H	ko:K02224	ko00860,ko01100,ko01120,map00860,map01100,map01120	ko00000,ko00001,ko01000	Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source
APKMJDPJ_02711	8.36e-174	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_02712	4.44e-110	-	-	-	S	-	-	-	Threonine/Serine exporter, ThrE
APKMJDPJ_02713	7.55e-172	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 9.46
APKMJDPJ_02714	0.0	-	-	-	P	ko:K07085	-	ko00000	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_02715	0.0	-	-	-	P	ko:K16089	-	ko00000,ko02000	COG4771 Outer membrane receptor for ferrienterochelin and colicins
APKMJDPJ_02716	5.45e-205	cbiK	4.99.1.3	-	H	ko:K02190	ko00860,ko01100,map00860,map01100	ko00000,ko00001,ko01000	COG4822 Cobalamin biosynthesis protein CbiK Co2 chelatase
APKMJDPJ_02717	0.0	-	-	-	P	ko:K02014	-	ko00000,ko02000	TonB dependent receptor
APKMJDPJ_02718	0.0	-	-	-	S	-	-	-	domain protein
APKMJDPJ_02719	0.0	-	6.6.1.2	-	H	ko:K02230	ko00860,ko01100,map00860,map01100	ko00000,ko00001,ko01000	COG1429 Cobalamin biosynthesis protein CobN and related
APKMJDPJ_02720	2.76e-123	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_02721	4.93e-92	-	-	-	U	-	-	-	Psort location CytoplasmicMembrane, score 9.46
APKMJDPJ_02722	3.05e-69	-	-	-	S	-	-	-	Conserved protein
APKMJDPJ_02723	0.0	cobJ	5.4.99.60, 5.4.99.61	-	H	ko:K06042	ko00860,ko01100,map00860,map01100	ko00000,ko00001,ko01000	COG1010 Precorrin-3B methylase
APKMJDPJ_02724	0.0	cbiE	2.1.1.132	-	H	ko:K00595	ko00860,ko01100,map00860,map01100	ko00000,ko00001,ko01000	precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE
APKMJDPJ_02725	0.0	cobM	2.1.1.133, 2.1.1.271	-	H	ko:K05936	ko00860,ko01100,map00860,map01100	ko00000,ko00001,ko01000	COG2875 Precorrin-4 methylase
APKMJDPJ_02726	0.0	cbiD	2.1.1.195	-	H	ko:K02188	ko00860,ko01100,map00860,map01100	ko00000,ko00001,ko01000	Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A
APKMJDPJ_02727	1.4e-95	-	-	-	O	-	-	-	Heat shock protein
APKMJDPJ_02728	2.57e-293	-	2.7.1.1	-	G	ko:K00844	ko00010,ko00051,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04910,ko04930,ko04973,ko05230,map00010,map00051,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200,map04066,map04910,map04930,map04973,map05230	ko00000,ko00001,ko00002,ko01000,ko04131	Hexokinase
APKMJDPJ_02735	9.12e-272	nspC	4.1.1.96	-	E	ko:K13747	ko00330,ko01100,map00330,map01100	ko00000,ko00001,ko01000	Psort location Cytoplasmic, score 8.96
APKMJDPJ_02736	0.0	pcrA	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	DNA helicase
APKMJDPJ_02737	1.41e-148	sodB	1.15.1.1	-	C	ko:K04564	ko04013,ko04068,ko04146,ko04211,ko04212,ko04213,ko05016,map04013,map04068,map04146,map04211,map04212,map04213,map05016	ko00000,ko00001,ko01000	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
APKMJDPJ_02738	1.05e-39	thiS	-	-	H	ko:K03154	ko04122,map04122	ko00000,ko00001	thiamine biosynthesis protein ThiS
APKMJDPJ_02739	4.52e-140	thiE	2.5.1.3	-	H	ko:K00788	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)
APKMJDPJ_02740	3.96e-179	thiG	2.8.1.10	-	H	ko:K03149	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000	Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S
APKMJDPJ_02741	0.0	thiC	4.1.99.17	-	H	ko:K03147	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
APKMJDPJ_02742	6.07e-126	-	-	-	S	-	-	-	COG NOG35345 non supervised orthologous group
APKMJDPJ_02743	3.03e-280	thiH	4.1.99.19	-	C	ko:K03150	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000	Thiazole biosynthesis protein ThiH
APKMJDPJ_02744	3.03e-166	moeZ	2.7.7.80, 2.8.1.11	-	H	ko:K21029,ko:K21147	ko04122,map04122	ko00000,ko00001,ko01000	involved in molybdopterin and thiamine biosynthesis family 2
APKMJDPJ_02745	2.64e-147	thiE	2.5.1.3	-	H	ko:K00788	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Thiamine monophosphate synthase TENI
APKMJDPJ_02746	8.82e-119	-	-	-	M	-	-	-	Outer membrane protein beta-barrel domain
APKMJDPJ_02747	1.17e-130	-	-	-	M	-	-	-	COG NOG19089 non supervised orthologous group
APKMJDPJ_02748	0.0	ppdK	2.7.9.1	-	G	ko:K01006	ko00620,ko00710,ko00720,ko01100,ko01120,ko01200,map00620,map00710,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Belongs to the PEP-utilizing enzyme family
APKMJDPJ_02749	0.0	rumA	2.1.1.190	-	H	ko:K03215	-	ko00000,ko01000,ko03009	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
APKMJDPJ_02750	6.29e-220	rluD	5.4.99.23	-	J	ko:K06180	-	ko00000,ko01000,ko03009	Responsible for synthesis of pseudouridine from uracil
APKMJDPJ_02751	3.75e-98	-	-	-	-	-	-	-	-
APKMJDPJ_02752	2.13e-105	-	-	-	-	-	-	-	-
APKMJDPJ_02753	4.33e-57	cas2	-	-	L	ko:K09951	-	ko00000,ko02048	CRISPR associated protein Cas2
APKMJDPJ_02754	2.36e-44	cas1	-	-	L	ko:K15342	-	ko00000,ko02048,ko03400	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
APKMJDPJ_02755	2.25e-67	-	-	-	-	-	-	-	-
APKMJDPJ_02756	3.05e-161	-	-	-	L	-	-	-	CRISPR associated protein Cas6
APKMJDPJ_02757	5.77e-210	map	3.4.11.18	-	E	ko:K01265	-	ko00000,ko01000,ko01002	Psort location Cytoplasmic, score
APKMJDPJ_02758	1.79e-255	rmuC	-	-	S	ko:K09760	-	ko00000	RmuC family
APKMJDPJ_02759	2.27e-175	-	-	-	J	-	-	-	Psort location Cytoplasmic, score
APKMJDPJ_02760	4.92e-302	nhaA	-	-	P	ko:K03313	-	ko00000,ko02000	) H( ) antiporter that extrudes sodium in exchange for external protons
APKMJDPJ_02761	4.84e-277	-	-	-	P	-	-	-	Psort location CytoplasmicMembrane, score
APKMJDPJ_02762	0.0	lepA	-	-	M	ko:K03596	ko05134,map05134	ko00000,ko00001	Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
APKMJDPJ_02763	1.21e-40	-	-	-	S	-	-	-	COG NOG33517 non supervised orthologous group
APKMJDPJ_02764	2.23e-102	-	-	-	S	-	-	-	COG NOG16874 non supervised orthologous group
APKMJDPJ_02765	2.16e-98	yjbQ	-	-	S	-	-	-	Secondary thiamine-phosphate synthase enzyme
APKMJDPJ_02766	9.87e-191	xth	3.1.11.2	-	L	ko:K01142	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Psort location Cytoplasmic, score 9.97
APKMJDPJ_02767	4.04e-284	mntH	-	-	P	ko:K03322	-	ko00000,ko02000	Metal ion transporter, metal ion (Mn2 Fe2 ) transporter (Nramp) family
APKMJDPJ_02768	3.66e-85	-	-	-	-	-	-	-	-
APKMJDPJ_02769	1.34e-55	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_02770	1.04e-156	yebC	-	-	K	-	-	-	Transcriptional regulatory protein
APKMJDPJ_02771	0.0	pheT	6.1.1.20	-	J	ko:K01890	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Psort location Cytoplasmic, score
APKMJDPJ_02772	2.03e-222	wcgX	2.7.8.33, 2.7.8.35	-	M	ko:K02851	-	ko00000,ko01000,ko01003,ko01005	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_02773	6.77e-216	-	5.1.3.26	-	M	ko:K19997	-	ko00000,ko01000	to Edwardsiella ictaluri UDP-glucose 4-epimerase WbeIT SWALL Q937X6 (EMBL AY057452) (323 aa) fasta scores E()
APKMJDPJ_02774	1.08e-246	-	-	-	M	-	-	-	Glycosyl transferase 4-like
APKMJDPJ_02775	3.01e-274	-	-	-	M	-	-	-	Glycosyl transferase 4-like
APKMJDPJ_02776	3.07e-264	-	-	-	M	-	-	-	Glycosyltransferase, group 1 family protein
APKMJDPJ_02777	1.98e-288	-	-	-	-	-	-	-	-
APKMJDPJ_02778	1.19e-172	-	-	-	M	-	-	-	Glycosyl transferase family 2
APKMJDPJ_02779	6.56e-308	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_02780	2.36e-216	-	-	-	M	-	-	-	Glycosyltransferase like family 2
APKMJDPJ_02781	1.38e-256	-	5.1.3.10	-	M	ko:K12454	ko00520,map00520	ko00000,ko00001,ko01000	Male sterility protein
APKMJDPJ_02782	2.53e-210	-	-	-	GM	-	-	-	GDP-mannose 4,6 dehydratase
APKMJDPJ_02783	1.24e-271	rfbG	4.2.1.45	-	M	ko:K01709	ko00520,map00520	ko00000,ko00001,ko01000	Polysaccharide biosynthesis protein
APKMJDPJ_02784	4.91e-198	rfbF	2.7.7.33	-	JM	ko:K00978	ko00500,ko00520,ko01100,map00500,map00520,map01100	ko00000,ko00001,ko01000	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits (eIF-2Bgamma eIF-2Bepsilon)
APKMJDPJ_02785	0.0	rfbH	1.17.1.1	-	E	ko:K12452	ko00520,map00520	ko00000,ko00001,ko01000	DegT/DnrJ/EryC1/StrS aminotransferase family
APKMJDPJ_02786	1.37e-107	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_02787	5.09e-119	-	-	-	K	-	-	-	Transcription termination factor nusG
APKMJDPJ_02788	0.0	fkp	-	-	S	-	-	-	GHMP kinase, N-terminal domain protein
APKMJDPJ_02789	4.47e-76	-	5.1.3.32	-	G	ko:K03534	-	ko00000,ko01000	Psort location Cytoplasmic, score 8.96
APKMJDPJ_02790	0.0	dnaB	3.6.4.12	-	L	ko:K02314	ko03030,ko04112,map03030,map04112	ko00000,ko00001,ko01000,ko03032	Participates in initiation and elongation during chromosome replication
APKMJDPJ_02791	7.53e-201	ispE	2.7.1.148	-	F	ko:K00919	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
APKMJDPJ_02792	7.58e-308	-	-	-	S	-	-	-	protein BT3056 SWALL AAO78162 (EMBL AE016938) (409 aa) fasta scores E()
APKMJDPJ_02793	7.64e-315	-	-	-	S	-	-	-	protein BT3056 SWALL AAO78162 (EMBL AE016938) (409 aa) fasta scores E()
APKMJDPJ_02794	1.05e-249	galE	5.1.3.2	-	M	ko:K01784	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the NAD(P)-dependent epimerase dehydratase family
APKMJDPJ_02795	2.83e-118	rnfA	-	-	C	ko:K03617	-	ko00000	Part of a membrane complex involved in electron transport
APKMJDPJ_02796	1.03e-127	rnfE	-	-	C	ko:K03613	-	ko00000	Part of a membrane complex involved in electron transport
APKMJDPJ_02797	2.62e-143	rnfG	-	-	C	ko:K03612	-	ko00000	Part of a membrane complex involved in electron transport
APKMJDPJ_02798	1.39e-231	rnfD	-	-	C	ko:K03614	-	ko00000	Part of a membrane complex involved in electron transport
APKMJDPJ_02799	2.46e-306	rnfC	-	-	C	ko:K03615	-	ko00000	Part of a membrane complex involved in electron transport
APKMJDPJ_02800	2.29e-178	rnfB	-	-	C	ko:K03616	-	ko00000	electron transport complex, RnfABCDGE type, B subunit
APKMJDPJ_02801	9.43e-90	-	-	-	T	ko:K03803	-	ko00000,ko03021	Positive regulator of sigma(E), RseC MucC
APKMJDPJ_02802	1.04e-86	-	-	-	-	-	-	-	-
APKMJDPJ_02803	0.0	-	-	-	S	-	-	-	Protein of unknown function (DUF3078)
APKMJDPJ_02805	0.0	pyrG	6.3.4.2	-	F	ko:K01937	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
APKMJDPJ_02806	0.0	yidC	-	-	U	ko:K03217	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044,ko03029	Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins
APKMJDPJ_02807	0.0	-	-	-	V	-	-	-	MATE efflux family protein
APKMJDPJ_02808	0.0	pop	-	-	EU	-	-	-	Peptidase, S9A B C family, catalytic domain protein
APKMJDPJ_02809	1.23e-255	-	-	-	S	-	-	-	of the beta-lactamase fold
APKMJDPJ_02810	4.58e-247	-	-	-	KT	ko:K03973	-	ko00000,ko02048,ko03000	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_02811	1.49e-75	-	-	-	K	ko:K10947	-	ko00000,ko03000	transcriptional regulator PadR family
APKMJDPJ_02812	1.32e-122	paiA	-	-	K	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_02813	0.0	-	-	-	P	ko:K03305	-	ko00000	amino acid peptide transporter
APKMJDPJ_02814	5.64e-112	ybaK	-	-	H	ko:K03976	-	ko00000,ko01000,ko03016	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
APKMJDPJ_02815	0.0	uvrA2	-	-	L	ko:K03701	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
APKMJDPJ_02816	0.0	lysM	-	-	M	-	-	-	LysM domain
APKMJDPJ_02817	1.34e-170	-	-	-	M	-	-	-	Outer membrane protein beta-barrel domain
APKMJDPJ_02818	1.85e-94	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
APKMJDPJ_02819	4.8e-72	rpoZ	-	-	S	-	-	-	COG NOG14434 non supervised orthologous group
APKMJDPJ_02820	1.33e-186	yfiO	-	-	S	ko:K05807	-	ko00000,ko02000	outer membrane assembly lipoprotein YfiO
APKMJDPJ_02821	7.15e-95	-	-	-	S	-	-	-	ACT domain protein
APKMJDPJ_02822	0.0	-	6.2.1.30	-	H	ko:K01912	ko00360,ko01120,ko05111,map00360,map01120,map05111	ko00000,ko00001,ko01000	Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
APKMJDPJ_02823	0.0	uvrB	-	-	L	ko:K03702	ko03420,map03420	ko00000,ko00001,ko03400	damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
APKMJDPJ_02824	6.49e-13	-	-	-	-	-	-	-	-
APKMJDPJ_02825	3.94e-141	sanA	-	-	S	ko:K03748	-	ko00000	Psort location CytoplasmicMembrane, score 9.82
APKMJDPJ_02826	2.07e-190	-	-	-	E	-	-	-	Transglutaminase/protease-like homologues
APKMJDPJ_02827	2.45e-93	-	-	-	J	-	-	-	Threonine alanine tRNA ligase second additional domain protein
APKMJDPJ_02828	6.34e-94	hsp20	-	-	O	ko:K13993	ko04141,map04141	ko00000,ko00001,ko03110	Belongs to the small heat shock protein (HSP20) family
APKMJDPJ_02829	0.0	-	-	-	T	-	-	-	COG0642 Signal transduction histidine kinase
APKMJDPJ_02830	3.58e-262	-	-	-	V	ko:K01992	-	ko00000,ko00002,ko02000	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_02831	6.61e-239	ybhS	-	-	V	ko:K01992	-	ko00000,ko00002,ko02000	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_02832	0.0	-	-	-	G	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
APKMJDPJ_02833	4.14e-201	-	-	-	M	ko:K01993	-	ko00000	COG COG0845 Membrane-fusion protein
APKMJDPJ_02834	4.65e-295	-	-	-	MU	-	-	-	COG NOG26656 non supervised orthologous group
APKMJDPJ_02835	2.55e-294	-	-	-	S	-	-	-	6-bladed beta-propeller
APKMJDPJ_02836	2.66e-216	-	-	-	K	-	-	-	transcriptional regulator (AraC family)
APKMJDPJ_02837	1.12e-64	-	-	-	CO	ko:K03671	ko04621,ko05418,map04621,map05418	ko00000,ko00001,ko03110	Thioredoxin
APKMJDPJ_02838	0.0	carB	6.3.5.5	-	F	ko:K01955	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ)
APKMJDPJ_02839	1.8e-273	carA	6.3.5.5	-	F	ko:K01956	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the CarA family
APKMJDPJ_02840	0.0	purF	2.4.2.14	-	F	ko:K00764	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko01002	Psort location Cytoplasmic, score 8.96
APKMJDPJ_02841	6.74e-20	glmS	2.6.1.16	-	M	ko:K00820	ko00250,ko00520,ko01100,ko01130,ko04931,map00250,map00520,map01100,map01130,map04931	ko00000,ko00001,ko01000,ko01002	Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
APKMJDPJ_02843	0.0	asnB	6.3.5.4	-	E	ko:K01953	ko00250,ko01100,ko01110,map00250,map01100,map01110	ko00000,ko00001,ko01000,ko01002	Asparagine synthase, glutamine-hydrolyzing
APKMJDPJ_02844	8.73e-185	-	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	glycerophosphoryl diester phosphodiesterase
APKMJDPJ_02845	0.0	-	-	-	S	-	-	-	gag-polyprotein putative aspartyl protease
APKMJDPJ_02846	2.09e-211	-	-	-	P	-	-	-	transport
APKMJDPJ_02847	2.61e-100	dapF	5.1.1.7	-	E	ko:K01778	ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
APKMJDPJ_02848	4.95e-311	dapL	2.6.1.83	-	H	ko:K10206	ko00300,ko01100,ko01110,ko01130,ko01230,map00300,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL-diaminopimelate
APKMJDPJ_02849	4.25e-128	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_02850	0.0	ppk	2.7.4.1	-	H	ko:K00937	ko00190,ko03018,map00190,map03018	ko00000,ko00001,ko01000,ko03019	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
APKMJDPJ_02851	1.58e-208	ppx	3.6.1.11, 3.6.1.40	-	FP	ko:K01524	ko00230,map00230	ko00000,ko00001,ko01000	Ppx GppA phosphatase family
APKMJDPJ_02852	1.02e-277	yqhD	-	-	C	ko:K08325	ko00640,map00640	ko00000,ko00001,ko01000	Psort location Cytoplasmic, score
APKMJDPJ_02853	5.27e-16	-	-	-	-	-	-	-	-
APKMJDPJ_02856	2.64e-289	trpB	4.2.1.20, 5.3.1.24	-	E	ko:K01696,ko:K01817	ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
APKMJDPJ_02857	0.0	trpE	4.1.3.27	-	EH	ko:K01657	ko00400,ko00405,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00400,map00405,map01100,map01110,map01130,map01230,map02024,map02025	ko00000,ko00001,ko00002,ko01000	Anthranilate synthase component I
APKMJDPJ_02858	6.22e-143	trpG	2.6.1.85, 4.1.3.27	-	EH	ko:K01658,ko:K01664	ko00400,ko00405,ko00790,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00400,map00405,map00790,map01100,map01110,map01130,map01230,map02024,map02025	ko00000,ko00001,ko00002,ko01000	Glutamine amidotransferase, class I
APKMJDPJ_02860	1.38e-185	trpC	4.1.1.48	-	E	ko:K01609	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the TrpC family
APKMJDPJ_02861	5.18e-144	trpF	5.3.1.24	-	E	ko:K01817	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the TrpF family
APKMJDPJ_02862	4.51e-192	trpA	4.2.1.20	-	E	ko:K01695	ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
APKMJDPJ_02863	9.77e-257	ansA	3.5.1.1	-	EJ	ko:K01424	ko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110	ko00000,ko00001,ko01000	L-asparaginase, type I
APKMJDPJ_02864	0.0	-	-	-	S	-	-	-	COG NOG06028 non supervised orthologous group
APKMJDPJ_02865	3.64e-83	-	-	-	T	-	-	-	COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
APKMJDPJ_02866	1.13e-272	-	-	-	M	-	-	-	COG COG2148 Sugar transferases involved in lipopolysaccharide synthesis
APKMJDPJ_02867	9.56e-211	-	-	-	M	-	-	-	probably involved in cell wall biogenesis
APKMJDPJ_02868	1.41e-150	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 9.26
APKMJDPJ_02869	9.43e-132	-	-	-	K	-	-	-	COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
APKMJDPJ_02870	7.32e-72	-	-	-	D	ko:K07322	-	ko00000	Hemerythrin HHE cation binding domain protein
APKMJDPJ_02871	3.93e-65	-	-	-	D	ko:K07322	-	ko00000	Hemerythrin HHE cation binding domain protein
APKMJDPJ_02873	3.63e-292	purH2	2.1.2.3, 3.5.4.10	-	F	ko:K00602	ko00230,ko00670,ko01100,ko01110,ko01130,ko01523,map00230,map00670,map01100,map01110,map01130,map01523	ko00000,ko00001,ko00002,ko01000,ko04147	COG0138 AICAR transformylase IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful)
APKMJDPJ_02874	1.93e-126	fldA	-	-	C	ko:K03839	-	ko00000	Low-potential electron donor to a number of redox enzymes
APKMJDPJ_02875	3.51e-85	-	-	-	S	-	-	-	Protein of unknown function (DUF2023)
APKMJDPJ_02876	6.67e-47	-	-	-	P	-	-	-	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
APKMJDPJ_02877	1.22e-248	-	1.8.5.2	-	S	ko:K16936,ko:K16937	ko00920,ko01120,map00920,map01120	ko00000,ko00001,ko01000	TQO small subunit DoxD
APKMJDPJ_02878	2.38e-114	-	-	-	O	-	-	-	Psort location Cytoplasmic, score 9.26
APKMJDPJ_02879	6.57e-277	-	1.11.1.5	-	C	ko:K00428	-	ko00000,ko01000	cytochrome C peroxidase
APKMJDPJ_02880	3.06e-237	-	2.1.1.14	-	E	ko:K00549	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Psort location Cytoplasmic, score 8.96
APKMJDPJ_02882	0.0	-	-	-	P	ko:K16089	-	ko00000,ko02000	COG4771 Outer membrane receptor for ferrienterochelin and colicins
APKMJDPJ_02883	2.13e-72	-	-	-	-	-	-	-	-
APKMJDPJ_02884	2.75e-289	-	-	-	S	ko:K07148	-	ko00000	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_02885	0.0	-	-	-	EGP	ko:K03446	-	ko00000,ko00002,ko02000	the major facilitator superfamily
APKMJDPJ_02886	3.91e-145	-	-	-	V	ko:K03543	-	ko00000,ko00002,ko02000	Auxiliary transport protein, membrane fusion protein (MFP) family protein
APKMJDPJ_02887	0.0	-	-	-	P	ko:K07085	-	ko00000	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_02888	4.83e-202	czcD	-	-	P	ko:K16264	-	ko00000,ko02000	cation diffusion facilitator family transporter
APKMJDPJ_02889	9.79e-81	-	-	-	-	-	-	-	-
APKMJDPJ_02890	5.43e-194	-	-	-	S	-	-	-	Calycin-like beta-barrel domain
APKMJDPJ_02891	4.51e-163	-	-	-	S	-	-	-	HmuY protein
APKMJDPJ_02892	0.0	hmuR	-	-	P	ko:K16089	-	ko00000,ko02000	COG4771 Outer membrane receptor for ferrienterochelin and colicins
APKMJDPJ_02893	0.0	cobN	6.6.1.2	-	H	ko:K02230	ko00860,ko01100,map00860,map01100	ko00000,ko00001,ko01000	COG1429 Cobalamin biosynthesis protein CobN and related
APKMJDPJ_02894	1.67e-151	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_02895	6.65e-131	-	-	-	U	-	-	-	Psort location CytoplasmicMembrane, score 9.46
APKMJDPJ_02896	1.45e-67	-	-	-	S	-	-	-	Conserved protein
APKMJDPJ_02897	0.0	nrdA	1.17.4.1	-	F	ko:K00525	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
APKMJDPJ_02898	2.41e-262	nrdB	1.17.4.1	-	F	ko:K00526	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
APKMJDPJ_02899	1.51e-48	-	-	-	-	-	-	-	-
APKMJDPJ_02900	2.58e-179	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 9.46
APKMJDPJ_02901	4.67e-116	-	-	-	S	-	-	-	Threonine/Serine exporter, ThrE
APKMJDPJ_02902	3.06e-165	eda	4.1.2.14, 4.1.3.42	-	G	ko:K01625	ko00030,ko00630,ko01100,ko01120,ko01200,map00030,map00630,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	KDPG and KHG aldolase
APKMJDPJ_02903	9.65e-249	-	2.7.1.45	-	G	ko:K00874	ko00030,ko01100,ko01120,ko01200,map00030,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Kinase, PfkB family
APKMJDPJ_02904	2.94e-261	-	-	-	K	ko:K02529	-	ko00000,ko03000	Psort location Cytoplasmic, score
APKMJDPJ_02905	1.08e-106	yvbK	2.3.1.82	-	K	ko:K03827,ko:K18815	-	br01600,ko00000,ko01000,ko01504	Psort location Cytoplasmic, score 8.96
APKMJDPJ_02906	1.23e-84	-	-	-	K	-	-	-	Transcriptional regulator, HxlR family
APKMJDPJ_02907	0.0	-	-	-	T	-	-	-	ATPase histidine kinase DNA gyrase B HSP90 domain protein
APKMJDPJ_02908	2.48e-277	-	-	-	S	-	-	-	AAA domain
APKMJDPJ_02909	8.88e-122	-	-	-	L	-	-	-	RNA ligase
APKMJDPJ_02910	2.16e-148	prfH	-	-	J	ko:K02839	-	ko00000,ko03012	RF-1 domain
APKMJDPJ_02911	0.0	rtcB_2	6.5.1.3	-	S	ko:K14415	-	ko00000,ko01000,ko03016	tRNA-splicing ligase RtcB
APKMJDPJ_02912	4.02e-299	mleN	-	-	C	ko:K03315	-	ko00000,ko02000	Na H antiporter
APKMJDPJ_02913	0.0	-	-	-	S	-	-	-	Tetratricopeptide repeat
APKMJDPJ_02915	4.92e-94	rpsP	-	-	J	ko:K02959	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Belongs to the bacterial ribosomal protein bS16 family
APKMJDPJ_02916	1.74e-88	-	-	-	S	-	-	-	Domain of unknown function (DUF4891)
APKMJDPJ_02917	1.47e-308	-	-	-	S	-	-	-	aa) fasta scores E()
APKMJDPJ_02918	1.26e-70	-	-	-	S	-	-	-	RNA recognition motif
APKMJDPJ_02919	0.0	potD	-	-	P	ko:K11069	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Psort location Periplasmic, score 9.44
APKMJDPJ_02920	3.74e-170	ydcV	-	-	P	ko:K11070	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter, permease protein
APKMJDPJ_02921	6.07e-182	-	-	-	P	ko:K11071	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_02922	0.0	potA	3.6.3.31	-	P	ko:K10112,ko:K11072,ko:K17324	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
APKMJDPJ_02923	2.48e-265	-	-	-	O	-	-	-	Antioxidant, AhpC TSA family
APKMJDPJ_02924	7.19e-152	-	-	-	-	-	-	-	-
APKMJDPJ_02925	0.0	glgP	2.4.1.1, 2.4.1.11, 2.4.1.8	GH65,GT3,GT35	G	ko:K00688,ko:K00691,ko:K16153	ko00500,ko01100,ko01110,ko02026,ko04217,ko04910,ko04922,ko04931,map00500,map01100,map01110,map02026,map04217,map04910,map04922,map04931	ko00000,ko00001,ko01000,ko01003	COG0058 Glucan phosphorylase
APKMJDPJ_02926	0.0	-	2.4.1.11	GT3	G	ko:K00693	ko00500,ko01100,ko04151,ko04152,ko04910,ko04922,ko04931,map00500,map01100,map04151,map04152,map04910,map04922,map04931	ko00000,ko00001,ko01000,ko01003	Starch synthase
APKMJDPJ_02927	1.76e-94	ntpK	-	-	C	ko:K02124	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002	COG COG0636 F0F1-type ATP synthase, subunit c Archaeal vacuolar-type H -ATPase, subunit K
APKMJDPJ_02928	0.0	-	-	-	C	ko:K02123	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002	Belongs to the V-ATPase 116 kDa subunit family
APKMJDPJ_02929	6.15e-132	-	-	-	C	ko:K02120	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002	Psort location Cytoplasmic, score 8.96
APKMJDPJ_02930	9.47e-317	ntpB	-	-	C	ko:K02118	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002	ATP synthase alpha beta family, nucleotide-binding domain protein
APKMJDPJ_02931	0.0	atpA	3.6.3.14, 3.6.3.15	-	C	ko:K02117	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit
APKMJDPJ_02932	7.49e-199	-	-	-	C	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_02933	8.39e-107	-	-	-	C	ko:K02121	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002	COG NOG11642 non supervised orthologous group
APKMJDPJ_02935	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
APKMJDPJ_02936	0.0	-	-	-	S	ko:K21572	-	ko00000,ko02000	SusD family
APKMJDPJ_02937	0.0	typA	-	-	T	ko:K06207	-	ko00000	GTP-binding protein TypA
APKMJDPJ_02938	4.82e-55	rpsO	-	-	J	ko:K02956	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
APKMJDPJ_02940	7.81e-121	-	-	-	K	-	-	-	Psort location Cytoplasmic, score
APKMJDPJ_02941	0.0	-	-	-	IQ	ko:K00666	-	ko00000,ko01000,ko01004	Psort location Cytoplasmic, score 9.97
APKMJDPJ_02942	0.0	-	-	-	T	-	-	-	Psort location CytoplasmicMembrane, score 7.88
APKMJDPJ_02943	0.0	ahcY	3.3.1.1	-	H	ko:K01251	ko00270,ko01100,map00270,map01100	ko00000,ko00001,ko00002,ko01000,ko01009,ko04147	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
APKMJDPJ_02944	0.0	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_02945	0.0	-	3.1.6.1	-	P	ko:K01130	ko00140,ko00600,map00140,map00600	ko00000,ko00001,ko01000	Arylsulfatase
APKMJDPJ_02946	0.0	-	-	-	E	ko:K21572	-	ko00000,ko02000	SusD family
APKMJDPJ_02947	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
APKMJDPJ_02948	9.96e-180	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
APKMJDPJ_02949	3.07e-219	-	-	-	PT	-	-	-	Domain of unknown function (DUF4974)
APKMJDPJ_02950	2.57e-122	-	-	-	K	ko:K03088	-	ko00000,ko03021	ECF sigma factor
APKMJDPJ_02951	3.48e-287	lolE	-	-	M	ko:K09808,ko:K09815	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG4591 ABC-type transport system, involved in lipoprotein release, permease component
APKMJDPJ_02952	1.44e-68	rbfA	-	-	J	ko:K02834	-	ko00000,ko03009	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
APKMJDPJ_02953	1.58e-153	mdmC	2.1.1.104	-	S	ko:K00588	ko00360,ko00940,ko00941,ko00945,ko01100,ko01110,map00360,map00940,map00941,map00945,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Psort location Cytoplasmic, score
APKMJDPJ_02954	0.0	pyk	2.7.1.40	-	G	ko:K00873	ko00010,ko00230,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko04930,ko05165,ko05203,ko05230,map00010,map00230,map00620,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map04930,map05165,map05203,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Pyruvate kinase
APKMJDPJ_02955	5.26e-96	aroQ	4.2.1.10	-	E	ko:K03786	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes a trans-dehydration via an enolate intermediate
APKMJDPJ_02956	1.23e-196	xerC	-	-	D	ko:K04763	-	ko00000,ko03036	Tyrosine recombinase XerC
APKMJDPJ_02957	0.0	-	3.2.1.51	GH95	G	ko:K15923	ko00511,map00511	ko00000,ko00001,ko01000	COG NOG04001 non supervised orthologous group
APKMJDPJ_02958	0.0	-	-	-	-	-	-	-	-
APKMJDPJ_02960	6.35e-278	-	-	-	S	-	-	-	COGs COG4299 conserved
APKMJDPJ_02961	0.0	glaA	-	-	M	-	-	-	Alpha-galactosidase. Removes both branched alpha-1,3- linked galactose residues of blood group B antigens and linear alpha-1,3-linked galactose structures
APKMJDPJ_02962	5.42e-110	-	-	-	-	-	-	-	-
APKMJDPJ_02963	0.0	-	-	-	F	ko:K21572	-	ko00000,ko02000	Pfam:SusD
APKMJDPJ_02964	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
APKMJDPJ_02966	0.0	-	-	-	S	ko:K21572	-	ko00000,ko02000	SusD family
APKMJDPJ_02967	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
APKMJDPJ_02969	0.0	pckA	4.1.1.49	-	H	ko:K01610	ko00010,ko00020,ko00620,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00710,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
APKMJDPJ_02970	1.91e-152	upp	2.4.2.9	-	F	ko:K00761	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	uracil phosphoribosyltransferase
APKMJDPJ_02971	7.48e-186	-	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	COG0584 Glycerophosphoryl diester phosphodiesterase
APKMJDPJ_02973	6.81e-251	oorB	1.2.7.11, 1.2.7.3	-	C	ko:K00175	ko00010,ko00020,ko00620,ko00650,ko00720,ko01100,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00650,map00720,map01100,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000	COG1013 Pyruvate ferredoxin oxidoreductase and related 2-oxoacid ferredoxin
APKMJDPJ_02974	0.0	porA	1.2.7.11, 1.2.7.3	-	C	ko:K00174	ko00010,ko00020,ko00620,ko00650,ko00720,ko01100,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00650,map00720,map01100,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000	2-oxoacid acceptor oxidoreductase, alpha subunit
APKMJDPJ_02976	5.44e-296	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
APKMJDPJ_02977	7.85e-209	-	-	-	K	-	-	-	Transcriptional regulator
APKMJDPJ_02978	6.33e-138	-	-	-	M	-	-	-	(189 aa) fasta scores E()
APKMJDPJ_02979	0.0	-	-	-	M	-	-	-	chlorophyll binding
APKMJDPJ_02980	8.61e-251	-	-	-	-	-	-	-	-
APKMJDPJ_02981	1.11e-208	-	-	-	S	-	-	-	protein BT1062 SWALL AAO76169 (EMBL AE016930) (317 aa) fasta scores E()
APKMJDPJ_02982	0.0	-	-	-	-	-	-	-	-
APKMJDPJ_02983	0.0	-	-	-	-	-	-	-	-
APKMJDPJ_02984	3.01e-59	-	-	-	L	ko:K03530	-	ko00000,ko03032,ko03036,ko03400	bacterial (prokaryotic) histone like domain
APKMJDPJ_02985	0.0	secD	-	-	U	ko:K03072,ko:K12257	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
APKMJDPJ_02987	9.18e-266	-	-	-	L	-	-	-	Endonuclease Exonuclease phosphatase family
APKMJDPJ_02988	1.07e-208	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_02989	2.82e-162	-	3.4.21.105	-	S	ko:K09650	-	ko00000,ko01000,ko01002,ko03029	Psort location CytoplasmicMembrane, score
APKMJDPJ_02990	1.96e-50	hupB	-	-	L	ko:K03530	-	ko00000,ko03032,ko03036,ko03400	Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
APKMJDPJ_02991	0.0	argS	6.1.1.19	-	J	ko:K01887	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Psort location Cytoplasmic, score
APKMJDPJ_02992	2.85e-243	-	-	-	-	-	-	-	-
APKMJDPJ_02993	0.0	topA	5.99.1.2	-	L	ko:K03168	-	ko00000,ko01000,ko03032,ko03400	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
APKMJDPJ_02994	0.0	-	-	-	H	-	-	-	Psort location OuterMembrane, score
APKMJDPJ_02995	0.0	-	-	-	S	-	-	-	Tetratricopeptide repeat protein
APKMJDPJ_02996	9.47e-127	-	3.6.1.55	-	F	ko:K03574	-	ko00000,ko01000,ko03400	NUDIX domain
APKMJDPJ_02998	0.0	-	-	-	S	-	-	-	aa) fasta scores E()
APKMJDPJ_02999	2.51e-292	-	-	-	S	-	-	-	Domain of unknown function (DUF4221)
APKMJDPJ_03000	4.13e-300	-	-	-	S	-	-	-	protein BT3056 SWALL AAO78162 (EMBL AE016938) (409 aa) fasta scores E()
APKMJDPJ_03003	0.0	-	-	-	S	-	-	-	Domain of unknown function (DUF4934)
APKMJDPJ_03004	0.0	-	-	-	S	-	-	-	Domain of unknown function (DUF4934)
APKMJDPJ_03005	0.0	-	-	-	S	-	-	-	(EMBL AE016928) (408 aa) fasta scores E()
APKMJDPJ_03006	2.96e-316	-	-	-	S	-	-	-	6-bladed beta-propeller
APKMJDPJ_03009	4.98e-273	-	-	-	S	-	-	-	Domain of unknown function (DUF4934)
APKMJDPJ_03010	0.0	-	-	-	M	-	-	-	Glycosyl transferase family 8
APKMJDPJ_03011	7.09e-277	-	-	-	M	-	-	-	Glycosyltransferase, group 1 family protein
APKMJDPJ_03014	1.23e-311	-	-	-	S	-	-	-	(EMBL AE016928) (408 aa) fasta scores E()
APKMJDPJ_03015	0.0	-	-	-	C	ko:K06871	-	ko00000	radical SAM domain protein
APKMJDPJ_03016	0.0	-	-	-	S	-	-	-	radical SAM domain protein
APKMJDPJ_03017	0.0	-	-	-	EM	-	-	-	Nucleotidyl transferase
APKMJDPJ_03018	3.75e-159	-	-	-	M	ko:K07271	-	ko00000,ko01000	LicD family
APKMJDPJ_03019	2.17e-145	-	-	-	-	-	-	-	-
APKMJDPJ_03020	4.33e-185	-	-	-	M	-	-	-	N-terminal domain of galactosyltransferase
APKMJDPJ_03021	4.79e-289	-	-	-	S	-	-	-	Domain of unknown function (DUF4934)
APKMJDPJ_03022	1.82e-278	-	-	-	S	-	-	-	Domain of unknown function (DUF4934)
APKMJDPJ_03023	0.0	-	3.2.1.22	-	G	ko:K07407	ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603	ko00000,ko00001,ko01000	alpha-galactosidase
APKMJDPJ_03025	1.77e-196	suhB	3.1.3.25	-	G	ko:K01092	ko00521,ko00562,ko01100,ko04070,map00521,map00562,map01100,map04070	ko00000,ko00001,ko00002,ko01000	Psort location Cytoplasmic, score
APKMJDPJ_03026	8.74e-169	comF	2.4.2.14	-	S	ko:K00764	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko01002	ComF family
APKMJDPJ_03027	2.07e-60	-	-	-	S	-	-	-	Antibiotic biosynthesis monooxygenase
APKMJDPJ_03028	0.0	-	-	-	S	-	-	-	Beta-L-arabinofuranosidase, GH127
APKMJDPJ_03029	5.95e-288	-	5.1.3.3	-	G	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Converts alpha-aldose to the beta-anomer
APKMJDPJ_03030	1.68e-310	xylE	-	-	P	-	-	-	Sugar (and other) transporter
APKMJDPJ_03031	0.0	-	2.3.1.54	-	C	ko:K00656	ko00620,ko00640,ko00650,ko01100,ko01120,map00620,map00640,map00650,map01100,map01120	ko00000,ko00001,ko01000	Pyruvate formate lyase-like
APKMJDPJ_03032	3.31e-193	-	1.97.1.4	-	C	ko:K04069	-	ko00000,ko01000	4Fe-4S single cluster domain
APKMJDPJ_03033	0.0	-	-	-	T	-	-	-	ATPase histidine kinase DNA gyrase B HSP90 domain protein
APKMJDPJ_03035	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
APKMJDPJ_03036	0.0	-	-	-	Q	ko:K21572	-	ko00000,ko02000	phosphatase activity
APKMJDPJ_03038	0.0	-	-	-	-	-	-	-	-
APKMJDPJ_03039	0.0	-	-	-	S	ko:K09955	-	ko00000	protein conserved in bacteria
APKMJDPJ_03042	2.32e-234	-	-	-	G	-	-	-	Kinase, PfkB family
APKMJDPJ_03043	0.0	prc	3.4.21.102	-	M	ko:K03797	-	ko00000,ko01000,ko01002	Belongs to the peptidase S41A family
APKMJDPJ_03044	0.0	-	-	-	T	-	-	-	luxR family
APKMJDPJ_03045	0.0	bglX	3.2.1.21	GH3	G	ko:K05349	ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110	ko00000,ko00001,ko01000	glycosyl hydrolase, family 3
APKMJDPJ_03047	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
APKMJDPJ_03048	0.0	-	-	-	S	ko:K21572	-	ko00000,ko02000	Pfam:SusD
APKMJDPJ_03049	0.0	-	-	-	S	-	-	-	Putative glucoamylase
APKMJDPJ_03050	0.0	-	-	-	G	-	-	-	Belongs to the glycosyl hydrolase 43 family
APKMJDPJ_03051	5.48e-190	-	-	-	S	-	-	-	Phospholipase/Carboxylesterase
APKMJDPJ_03052	0.0	ispG	1.17.7.1, 1.17.7.3	-	I	ko:K03526	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
APKMJDPJ_03053	2.94e-107	purE	5.4.99.18	-	F	ko:K01588	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
APKMJDPJ_03054	3.43e-88	gcvH	-	-	E	ko:K02437	ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200	ko00000,ko00001,ko00002	The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein
APKMJDPJ_03055	1.61e-153	-	-	-	I	-	-	-	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_03056	0.0	rpoN	-	-	K	ko:K03092	ko02020,ko05111,map02020,map05111	ko00000,ko00001,ko03021	COG1508 DNA-directed RNA polymerase specialized sigma subunit sigma54 homolog
APKMJDPJ_03057	0.0	pepP	3.4.11.9	-	E	ko:K01262	-	ko00000,ko01000,ko01002	Psort location Cytoplasmic, score
APKMJDPJ_03059	0.0	-	-	-	E	-	-	-	Domain of Unknown Function with PDB structure (DUF3857)
APKMJDPJ_03060	0.0	-	-	-	E	-	-	-	Domain of Unknown Function with PDB structure (DUF3858)
APKMJDPJ_03061	0.0	-	-	-	S	-	-	-	phosphatase family
APKMJDPJ_03062	0.0	-	-	-	T	-	-	-	ATPase histidine kinase DNA gyrase B HSP90 domain protein
APKMJDPJ_03064	0.0	udk2	2.7.1.48	-	FJ	ko:K00876	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	Phosphoribulokinase Uridine kinase family
APKMJDPJ_03065	0.0	-	-	-	P	ko:K03324	-	ko00000,ko02000	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_03066	2.68e-36	rubR	-	-	C	-	-	-	Psort location Cytoplasmic, score
APKMJDPJ_03067	0.0	-	-	-	T	-	-	-	His Kinase A (phosphoacceptor) domain
APKMJDPJ_03068	0.0	yoaB	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_03070	1.03e-151	yihX	3.1.3.10	-	S	ko:K07025,ko:K20866	ko00010,ko01120,map00010,map01120	ko00000,ko00001,ko01000	Psort location Cytoplasmic, score 8.96
APKMJDPJ_03071	3.85e-234	ribF	2.7.1.26, 2.7.7.2	-	H	ko:K11753	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	riboflavin biosynthesis protein
APKMJDPJ_03072	9.33e-180	-	-	-	S	ko:K07052	-	ko00000	CAAX amino terminal protease family
APKMJDPJ_03073	2.05e-140	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
APKMJDPJ_03074	1.72e-44	-	-	-	K	ko:K07727	-	ko00000,ko03000	Psort location Cytoplasmic, score 8.96
APKMJDPJ_03075	1.82e-93	sufE	-	-	S	ko:K02426	-	ko00000	COG2166 SufE protein probably involved in Fe-S center assembly
APKMJDPJ_03076	8.62e-253	ywaD	-	-	S	-	-	-	glutaminyl-peptide cyclotransferase (glutaminyl cyclase) K00683
APKMJDPJ_03077	2.39e-228	ykfA	3.4.17.13	-	V	ko:K01297	-	ko00000,ko01000,ko01002,ko01011	proteins, homologs of microcin C7 resistance protein MccF
APKMJDPJ_03078	7.57e-205	bglA_1	-	-	G	-	-	-	Glycosyl hydrolase family 16
APKMJDPJ_03079	1.89e-225	-	2.3.1.19, 2.3.1.8	-	C	ko:K00625,ko:K00634	ko00430,ko00620,ko00640,ko00650,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00650,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Psort location Cytoplasmic, score
APKMJDPJ_03080	1.53e-267	buk	2.7.2.7	-	H	ko:K00929	ko00650,ko01100,map00650,map01100	ko00000,ko00001,ko01000	Belongs to the acetokinase family
APKMJDPJ_03081	2.79e-176	-	-	-	S	-	-	-	Domain of unknown function (DUF4469) with IG-like fold
APKMJDPJ_03084	0.0	-	-	-	S	-	-	-	COG NOG26858 non supervised orthologous group
APKMJDPJ_03085	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
APKMJDPJ_03086	2.12e-225	-	-	-	PT	-	-	-	Sigma factor regulatory protein, FecR PupR family
APKMJDPJ_03087	2.59e-119	-	-	-	K	ko:K03088	-	ko00000,ko03021	RNA polymerase sigma-70 factor
APKMJDPJ_03088	0.0	pnp	2.7.7.8	-	J	ko:K00962	ko00230,ko00240,ko03018,map00230,map00240,map03018	ko00000,ko00001,ko00002,ko01000,ko03016,ko03019	Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction
APKMJDPJ_03089	1.09e-273	-	-	-	O	-	-	-	COG NOG14454 non supervised orthologous group
APKMJDPJ_03090	8.03e-96	greA	-	-	K	ko:K03624	-	ko00000,ko03021	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
APKMJDPJ_03091	3.91e-91	hinT	-	-	FG	ko:K02503	-	ko00000,ko04147	COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family
APKMJDPJ_03092	2.43e-263	manC	2.7.7.13	-	M	ko:K00971	ko00051,ko00520,ko01100,ko01110,map00051,map00520,map01100,map01110	ko00000,ko00001,ko00002,ko01000	mannose-1-phosphate guanylyltransferase
APKMJDPJ_03095	7.8e-128	-	-	-	S	-	-	-	ORF6N domain
APKMJDPJ_03096	2.04e-116	-	-	-	L	-	-	-	Arm DNA-binding domain
APKMJDPJ_03097	1.53e-81	-	-	-	L	-	-	-	Arm DNA-binding domain
APKMJDPJ_03098	4.95e-09	-	-	-	K	-	-	-	Fic/DOC family
APKMJDPJ_03099	1e-51	-	-	-	K	-	-	-	Fic/DOC family
APKMJDPJ_03100	4.34e-131	-	-	-	J	-	-	-	Acetyltransferase (GNAT) domain
APKMJDPJ_03101	6.98e-97	-	-	-	-	-	-	-	-
APKMJDPJ_03102	1.15e-303	-	-	-	-	-	-	-	-
APKMJDPJ_03104	8.63e-117	-	-	-	C	-	-	-	Flavodoxin
APKMJDPJ_03105	0.0	dxs2	2.2.1.7	-	H	ko:K01662	ko00730,ko00900,ko01100,ko01110,ko01130,map00730,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
APKMJDPJ_03106	1.73e-218	-	-	-	K	-	-	-	transcriptional regulator (AraC family)
APKMJDPJ_03107	6.14e-80	-	-	-	S	-	-	-	Cupin domain
APKMJDPJ_03108	1.85e-121	ogt	2.1.1.63	-	H	ko:K00567,ko:K10778	-	ko00000,ko01000,ko03000,ko03400	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
APKMJDPJ_03109	1.25e-201	-	-	-	K	-	-	-	transcriptional regulator, LuxR family
APKMJDPJ_03110	1e-143	maa	2.3.1.18, 2.3.1.79	-	S	ko:K00633,ko:K00661	-	ko00000,ko01000	Psort location Cytoplasmic, score
APKMJDPJ_03111	1.2e-159	-	-	-	S	ko:K09702	-	ko00000	Protein of unknown function (DUF1349)
APKMJDPJ_03112	4.03e-115	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 9.46
APKMJDPJ_03113	0.0	-	-	-	H	ko:K02014	-	ko00000,ko02000	COG COG4771 Outer membrane receptor for ferrienterochelin and colicins
APKMJDPJ_03114	0.0	-	-	-	S	ko:K07079	-	ko00000	4Fe-4S dicluster domain
APKMJDPJ_03115	0.0	yccM	-	-	C	-	-	-	Psort location CytoplasmicMembrane, score
APKMJDPJ_03116	1.22e-177	-	-	-	K	ko:K02477	-	ko00000,ko02022	LytTr DNA-binding domain protein
APKMJDPJ_03117	3.65e-128	-	-	-	T	-	-	-	Histidine kinase
APKMJDPJ_03121	3.39e-137	-	3.6.1.13	-	L	ko:K01515	ko00230,map00230	ko00000,ko00001,ko01000	Psort location Cytoplasmic, score 8.96
APKMJDPJ_03122	1.15e-292	-	-	-	-	-	-	-	-
APKMJDPJ_03123	3.4e-231	-	-	-	-	-	-	-	-
APKMJDPJ_03124	4.51e-235	-	-	-	-	-	-	-	-
APKMJDPJ_03125	0.0	-	-	-	S	ko:K21571	-	ko00000	Fibronectin type 3 domain
APKMJDPJ_03126	0.0	-	-	-	N	-	-	-	Leucine rich repeats (6 copies)
APKMJDPJ_03127	7.49e-206	-	-	-	-	-	-	-	-
APKMJDPJ_03128	6.7e-286	-	-	-	D	-	-	-	Transglutaminase-like domain
APKMJDPJ_03129	0.0	-	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase family
APKMJDPJ_03130	8.74e-161	-	-	-	S	-	-	-	P-loop ATPase and inactivated derivatives
APKMJDPJ_03131	0.0	-	-	-	S	-	-	-	Protein of unknown function (DUF2961)
APKMJDPJ_03132	1.67e-222	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
APKMJDPJ_03134	0.0	-	-	-	-	-	-	-	-
APKMJDPJ_03135	1.4e-237	-	-	-	M	-	-	-	Putative OmpA-OmpF-like porin family
APKMJDPJ_03136	5.16e-135	-	-	-	S	-	-	-	Domain of unknown function (DUF4369)
APKMJDPJ_03137	2.35e-205	-	-	-	S	-	-	-	Fimbrillin-A associated anchor proteins Mfa1 and Mfa2
APKMJDPJ_03139	8.43e-162	-	-	-	S	-	-	-	COG NOG23394 non supervised orthologous group
APKMJDPJ_03140	1.74e-131	yvqK	2.5.1.17	-	S	ko:K00798	ko00860,ko01100,map00860,map01100	ko00000,ko00001,ko00002,ko01000	Conserved protein
APKMJDPJ_03141	9.33e-48	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_03142	0.0	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
APKMJDPJ_03143	7.16e-155	-	-	-	-	-	-	-	-
APKMJDPJ_03144	1.74e-78	-	-	-	-	-	-	-	-
APKMJDPJ_03145	0.0	-	-	-	S	-	-	-	Protein of unknown function (DUF3987)
APKMJDPJ_03146	1.28e-258	-	-	-	L	-	-	-	COG NOG08810 non supervised orthologous group
APKMJDPJ_03147	0.0	-	-	-	D	-	-	-	recombination enzyme
APKMJDPJ_03148	2.74e-312	-	-	-	S	ko:K07133	-	ko00000	Domain of unknown function (DUF4143)
APKMJDPJ_03149	1.64e-170	-	-	-	L	-	-	-	Integrase core domain
APKMJDPJ_03150	6.35e-164	-	-	-	L	-	-	-	Integrase core domain
APKMJDPJ_03151	3.02e-175	-	-	-	L	-	-	-	IstB-like ATP binding protein
APKMJDPJ_03152	7.54e-44	-	-	-	-	-	-	-	-
APKMJDPJ_03153	5.54e-88	-	-	-	S	-	-	-	Domain of unknown function (DUF4373)
APKMJDPJ_03154	4.91e-87	-	-	-	L	-	-	-	PFAM Integrase catalytic
APKMJDPJ_03156	1.5e-257	-	-	-	CO	-	-	-	amine dehydrogenase activity
APKMJDPJ_03157	0.0	-	3.2.1.81	-	CO	ko:K01219	-	ko00000,ko01000	amine dehydrogenase activity
APKMJDPJ_03158	0.0	-	-	-	GM	ko:K21572	-	ko00000,ko02000	SusD family
APKMJDPJ_03159	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
APKMJDPJ_03160	0.0	bga	3.2.1.23	-	G	ko:K12308	ko00052,map00052	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 35 family
APKMJDPJ_03161	2.11e-222	-	3.2.1.73	-	G	ko:K01216,ko:K07004	-	ko00000,ko01000	xyloglucan:xyloglucosyl transferase activity
APKMJDPJ_03162	0.0	-	3.2.1.52	GH20	G	ko:K12373	ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142	ko00000,ko00001,ko00002,ko01000,ko03110	Glycosyl hydrolase family 20, catalytic domain
APKMJDPJ_03163	2.66e-216	-	-	-	G	-	-	-	Psort location Extracellular, score
APKMJDPJ_03164	0.0	-	-	-	K	ko:K21572	-	ko00000,ko02000	Pfam:SusD
APKMJDPJ_03165	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
APKMJDPJ_03166	6.19e-287	-	-	-	S	-	-	-	Cyclically-permuted mutarotase family protein
APKMJDPJ_03167	8.83e-306	-	-	-	G	ko:K08191	-	ko00000,ko02000	Transporter, major facilitator family protein
APKMJDPJ_03168	7.83e-165	-	5.1.3.8	-	G	ko:K01787	ko00520,map00520	ko00000,ko00001,ko01000	COG COG2942 N-acyl-D-glucosamine 2-epimerase
APKMJDPJ_03169	0.0	-	-	-	L	-	-	-	COG COG3666 Transposase and inactivated derivatives
APKMJDPJ_03170	0.0	nanH	3.2.1.18	GH33	G	ko:K01186	ko00511,ko00600,ko04142,map00511,map00600,map04142	ko00000,ko00001,ko01000,ko02042	BNR Asp-box repeat protein
APKMJDPJ_03171	1.4e-270	-	-	-	L	-	-	-	Integrase core domain
APKMJDPJ_03172	1.28e-182	-	-	-	L	-	-	-	IstB-like ATP binding protein
APKMJDPJ_03173	0.0	-	-	-	T	-	-	-	COG COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
APKMJDPJ_03174	1.13e-120	-	-	-	KT	-	-	-	Homeodomain-like domain
APKMJDPJ_03175	1.15e-52	-	-	-	K	-	-	-	COG NOG37763 non supervised orthologous group
APKMJDPJ_03176	4.61e-67	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_03177	5.29e-27	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_03178	1.92e-179	-	2.1.1.72	-	L	ko:K03427	-	ko00000,ko01000,ko02048	HsdM N-terminal domain
APKMJDPJ_03179	5.77e-46	-	2.1.1.72	-	L	ko:K03427	-	ko00000,ko01000,ko02048	HsdM N-terminal domain
APKMJDPJ_03180	2.22e-98	-	-	-	S	-	-	-	Protein of unknown function (DUF2971)
APKMJDPJ_03181	9.15e-61	-	-	-	S	-	-	-	Protein of unknown function (DUF2971)
APKMJDPJ_03182	6.89e-233	-	-	-	L	-	-	-	COG COG3547 Transposase and inactivated derivatives
APKMJDPJ_03183	1.73e-292	-	-	-	M	-	-	-	Phosphate-selective porin O and P
APKMJDPJ_03184	5.36e-247	ansB	3.5.1.1	-	EJ	ko:K01424	ko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the asparaginase 1 family
APKMJDPJ_03185	1.3e-287	dcuB	-	-	S	ko:K07791,ko:K07792	ko02020,map02020	ko00000,ko00001,ko02000	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_03186	0.0	aspA	4.3.1.1	-	E	ko:K01744	ko00250,ko01100,map00250,map01100	ko00000,ko00001,ko01000	Psort location Cytoplasmic, score 9.97
APKMJDPJ_03187	8.4e-289	-	-	-	S	-	-	-	Domain of unknown function (DUF4934)
APKMJDPJ_03189	1.31e-133	-	-	-	M	-	-	-	COG NOG27749 non supervised orthologous group
APKMJDPJ_03190	0.0	priA	-	-	L	ko:K04066	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
APKMJDPJ_03191	0.0	-	-	-	G	-	-	-	Domain of unknown function (DUF4091)
APKMJDPJ_03192	2.92e-113	ptpA	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
APKMJDPJ_03193	0.0	-	-	-	S	ko:K07037	-	ko00000	7TM receptor with intracellular HD hydrolase
APKMJDPJ_03194	0.0	gltX	6.1.1.17	-	J	ko:K01885	ko00860,ko00970,ko01100,ko01110,ko01120,map00860,map00970,map01100,map01110,map01120	ko00000,ko00001,ko00002,ko01000,ko01007,ko02048,ko03016	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
APKMJDPJ_03195	1.35e-306	waaA	2.4.99.12, 2.4.99.13, 2.4.99.14, 2.4.99.15	GT30	M	ko:K02527	ko00540,ko01100,map00540,map01100	ko00000,ko00001,ko00002,ko01000,ko01003,ko01005	Psort location Cytoplasmic, score 8.96
APKMJDPJ_03196	1.18e-98	dapH	-	-	S	-	-	-	Bacterial transferase hexapeptide repeat protein
APKMJDPJ_03197	0.0	-	3.4.11.9	-	E	ko:K01262	-	ko00000,ko01000,ko01002	COG0006 Xaa-Pro aminopeptidase
APKMJDPJ_03198	9.08e-33	rpsU	-	-	J	ko:K02970	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bS21 family
APKMJDPJ_03199	3.89e-208	xerC	-	-	D	ko:K03733	-	ko00000,ko03036	Belongs to the 'phage' integrase family. XerC subfamily
APKMJDPJ_03200	4.54e-60	raiA	-	-	J	ko:K05808	-	ko00000,ko03009	Ribosomal subunit interface protein
APKMJDPJ_03205	1.79e-289	tuf	-	-	J	ko:K02358	-	ko00000,ko03012,ko03029,ko04147	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
APKMJDPJ_03207	6.46e-37	secE	-	-	U	ko:K03073	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
APKMJDPJ_03208	7.13e-123	nusG	-	-	K	ko:K02601	-	ko00000,ko03009,ko03021	Participates in transcription elongation, termination and antitermination
APKMJDPJ_03209	1.48e-99	rplK	-	-	J	ko:K02867	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
APKMJDPJ_03210	4.12e-159	rplA	-	-	J	ko:K02863	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
APKMJDPJ_03211	1.92e-113	rplJ	-	-	J	ko:K02864	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L10
APKMJDPJ_03212	2.49e-62	rplL	-	-	J	ko:K02935	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
APKMJDPJ_03213	0.0	rpoB	2.7.7.6	-	K	ko:K03043	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
APKMJDPJ_03214	0.0	rpoC	2.7.7.6	-	K	ko:K03046	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
APKMJDPJ_03215	4.15e-280	-	-	-	S	-	-	-	Acyltransferase family
APKMJDPJ_03216	1.58e-116	-	-	-	T	-	-	-	cyclic nucleotide binding
APKMJDPJ_03217	7.86e-46	-	-	-	S	-	-	-	Transglycosylase associated protein
APKMJDPJ_03218	7.01e-49	-	-	-	-	-	-	-	-
APKMJDPJ_03219	1.38e-65	-	-	-	T	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_03220	4.76e-87	rpsL	-	-	J	ko:K02950	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
APKMJDPJ_03221	4.64e-106	rpsG	-	-	J	ko:K02992	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
APKMJDPJ_03222	0.0	fusA	-	-	J	ko:K02355	-	ko00000,ko03012,ko03029	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
APKMJDPJ_03223	9.42e-63	rpsJ	-	-	J	ko:K02946	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Involved in the binding of tRNA to the ribosomes
APKMJDPJ_03224	6.71e-147	rplC	-	-	J	ko:K02906	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
APKMJDPJ_03225	2.5e-139	rplD	-	-	J	ko:K02926	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the polypeptide exit tunnel
APKMJDPJ_03226	2.2e-61	rplW	-	-	J	ko:K02892	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
APKMJDPJ_03227	3.85e-194	rplB	-	-	J	ko:K02886	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
APKMJDPJ_03228	1.49e-58	rpsS	-	-	J	ko:K02965	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
APKMJDPJ_03229	3.59e-88	rplV	-	-	J	ko:K02890	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
APKMJDPJ_03230	4.09e-165	rpsC	-	-	J	ko:K02982	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
APKMJDPJ_03231	9.31e-97	rplP	-	-	J	ko:K02878	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
APKMJDPJ_03232	5.03e-35	rpmC	-	-	J	ko:K02904	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uL29 family
APKMJDPJ_03233	1.6e-52	rpsQ	-	-	J	ko:K02961	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
APKMJDPJ_03234	3.37e-79	rplN	-	-	J	ko:K02874	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
APKMJDPJ_03235	1.07e-68	rplX	-	-	J	ko:K02895	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
APKMJDPJ_03236	1.22e-121	rplE	-	-	J	ko:K02931	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
APKMJDPJ_03237	3.88e-61	rpsN	-	-	J	ko:K02954	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
APKMJDPJ_03238	2.47e-88	rpsH	-	-	J	ko:K02994	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
APKMJDPJ_03239	2.88e-131	rplF	-	-	J	ko:K02933	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
APKMJDPJ_03240	1.72e-71	rplR	-	-	J	ko:K02881	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
APKMJDPJ_03241	1.57e-113	rpsE	-	-	J	ko:K02988	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
APKMJDPJ_03242	2.9e-31	rpmD	-	-	J	ko:K02907	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	50S ribosomal protein L30
APKMJDPJ_03243	6.99e-94	rplO	-	-	J	ko:K02876	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	binds to the 23S rRNA
APKMJDPJ_03244	4.32e-313	secY	-	-	U	ko:K03076	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
APKMJDPJ_03245	9.48e-195	map	3.4.11.18	-	E	ko:K01265	-	ko00000,ko01000,ko01002	Psort location Cytoplasmic, score
APKMJDPJ_03246	1.98e-44	infA	-	-	J	ko:K02518	-	ko00000,ko03012	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
APKMJDPJ_03247	1.06e-18	rpmJ	-	-	J	ko:K02919	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL36 family
APKMJDPJ_03248	1.77e-81	rpsM	-	-	J	ko:K02952	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
APKMJDPJ_03249	7.13e-87	rpsK	-	-	J	ko:K02948	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
APKMJDPJ_03251	8.82e-141	rpsD	-	-	J	ko:K02986	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
APKMJDPJ_03252	1.39e-231	rpoA	2.7.7.6	-	K	ko:K03040	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
APKMJDPJ_03253	3.1e-101	rplQ	-	-	J	ko:K02879	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L17
APKMJDPJ_03254	3.52e-85	-	-	-	S	-	-	-	COG NOG31702 non supervised orthologous group
APKMJDPJ_03255	3.14e-121	-	-	-	S	-	-	-	COG NOG27987 non supervised orthologous group
APKMJDPJ_03256	0.0	mutS_2	-	-	L	-	-	-	DNA mismatch repair protein MutS
APKMJDPJ_03257	1.46e-148	-	-	-	S	-	-	-	COG NOG29571 non supervised orthologous group
APKMJDPJ_03258	0.0	hutU	4.2.1.49	-	H	ko:K01712	ko00340,ko01100,map00340,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
APKMJDPJ_03259	1.37e-216	ftcD	2.1.2.5, 4.3.1.4	-	E	ko:K00603,ko:K13990	ko00340,ko00670,ko01100,map00340,map00670,map01100	ko00000,ko00001,ko01000,ko03036,ko04147	Glutamate formiminotransferase
APKMJDPJ_03260	3.08e-304	hutI	3.5.2.7	-	F	ko:K01468	ko00340,ko01100,map00340,map01100	ko00000,ko00001,ko00002,ko01000	Imidazolone-5-propionate hydrolase
APKMJDPJ_03261	1.05e-136	fchA	-	-	E	-	-	-	COG3404 Methenyl tetrahydrofolate cyclohydrolase
APKMJDPJ_03262	0.0	hutH	4.3.1.3	-	E	ko:K01745	ko00340,ko01100,map00340,map01100	ko00000,ko00001,ko00002,ko01000	Histidine ammonia-lyase
APKMJDPJ_03263	1.39e-148	-	-	-	K	-	-	-	transcriptional regulator, TetR family
APKMJDPJ_03264	2.86e-298	-	-	-	MU	-	-	-	Psort location OuterMembrane, score
APKMJDPJ_03265	2.07e-237	-	-	-	M	ko:K03585	ko01501,ko01503,map01501,map01503	ko00000,ko00001,ko00002,ko01504,ko02000,ko03036	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
APKMJDPJ_03266	0.0	czcA	-	-	V	ko:K03296	-	ko00000	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
APKMJDPJ_03267	6.24e-66	-	-	-	E	-	-	-	COG NOG19114 non supervised orthologous group
APKMJDPJ_03268	0.0	-	-	-	E	-	-	-	COG COG2755 Lysophospholipase L1 and related esterases
APKMJDPJ_03269	2.29e-212	-	-	-	E	-	-	-	COG NOG14456 non supervised orthologous group
APKMJDPJ_03270	0.0	algI	-	-	M	-	-	-	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_03271	1.22e-06	-	-	-	L	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_03272	8.05e-08	-	-	-	L	-	-	-	COG COG3464 Transposase and inactivated derivatives
APKMJDPJ_03273	0.0	cas9	-	-	L	ko:K09952	-	ko00000,ko01000,ko02048	CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
APKMJDPJ_03274	9.16e-68	-	-	-	S	-	-	-	Virulence protein RhuM family
APKMJDPJ_03275	2.2e-16	-	-	-	S	-	-	-	Virulence protein RhuM family
APKMJDPJ_03276	7.1e-224	cas1	-	-	L	ko:K15342	-	ko00000,ko02048,ko03400	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
APKMJDPJ_03277	5.96e-70	cas2	-	-	L	ko:K09951	-	ko00000,ko02048	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
APKMJDPJ_03278	1.09e-67	-	-	-	KLT	ko:K07126	-	ko00000	COG0790 FOG TPR repeat, SEL1 subfamily
APKMJDPJ_03279	0.0	-	-	-	O	ko:K04079	ko04141,ko04151,ko04217,ko04612,ko04621,ko04626,ko04657,ko04659,ko04914,ko04915,ko05200,ko05215,ko05418,map04141,map04151,map04217,map04612,map04621,map04626,map04657,map04659,map04914,map04915,map05200,map05215,map05418	ko00000,ko00001,ko01009,ko03029,ko03051,ko03110,ko04131,ko04147	COG COG0326 Molecular chaperone, HSP90 family
APKMJDPJ_03280	3.88e-264	-	-	-	K	-	-	-	trisaccharide binding
APKMJDPJ_03281	0.0	speA	4.1.1.19	-	H	ko:K01585	ko00330,ko01100,map00330,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the biosynthesis of agmatine from arginine
APKMJDPJ_03282	3.49e-178	argB	2.7.2.8	-	F	ko:K00930	ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the acetylglutamate kinase family. ArgB subfamily
APKMJDPJ_03283	1.03e-112	-	-	-	K	ko:K03088	-	ko00000,ko03021	Belongs to the sigma-70 factor family. ECF subfamily
APKMJDPJ_03284	5.53e-113	-	-	-	-	-	-	-	-
APKMJDPJ_03285	7.69e-105	-	-	-	S	-	-	-	Domain of unknown function (DUF4252)
APKMJDPJ_03286	2.66e-127	-	-	-	S	-	-	-	Putative auto-transporter adhesin, head GIN domain
APKMJDPJ_03287	2.74e-131	-	-	-	S	-	-	-	Putative auto-transporter adhesin, head GIN domain
APKMJDPJ_03288	8.05e-166	-	-	-	S	ko:K07043	-	ko00000	Psort location Cytoplasmic, score 8.96
APKMJDPJ_03289	1.08e-87	-	-	-	S	-	-	-	COG NOG29451 non supervised orthologous group
APKMJDPJ_03290	5.41e-251	-	-	-	-	-	-	-	-
APKMJDPJ_03293	1.26e-292	-	-	-	S	-	-	-	6-bladed beta-propeller
APKMJDPJ_03296	9.09e-235	-	-	-	K	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_03297	0.0	fucI	5.3.1.25, 5.3.1.3	-	G	ko:K01818	ko00051,ko01120,map00051,map01120	ko00000,ko00001,ko01000	Converts the aldose L-fucose into the corresponding ketose L-fuculose
APKMJDPJ_03298	5.14e-268	fucO	1.1.1.77	-	C	ko:K00048	ko00630,ko00640,ko01120,map00630,map00640,map01120	ko00000,ko00001,ko01000	Psort location Cytoplasmic, score
APKMJDPJ_03299	1.35e-154	fucA	4.1.1.104	-	G	ko:K22130	-	ko00000,ko01000	L-fuculose-phosphate aldolase, aldolase class II family
APKMJDPJ_03300	0.0	fucK	2.7.1.5, 2.7.1.51	-	G	ko:K00848,ko:K00879	ko00040,ko00051,ko01120,map00040,map00051,map01120	ko00000,ko00001,ko01000	Involved in the catabolism of L-rhamnose (6-deoxy-L- mannose). Catalyzes the transfer of the gamma-phosphate group from ATP to the 1-hydroxyl group of L-rhamnulose to yield L-rhamnulose 1-phosphate
APKMJDPJ_03301	0.0	fucP	-	-	G	ko:K02429	-	ko00000,ko02000	L-fucose H symporter permease
APKMJDPJ_03302	1.06e-105	rimP	-	-	J	ko:K09748	-	ko00000,ko03009	Required for maturation of 30S ribosomal subunits
APKMJDPJ_03303	5.21e-293	nusA	-	-	K	ko:K02600	-	ko00000,ko03009,ko03021	Participates in both transcription termination and antitermination
APKMJDPJ_03304	0.0	infB	-	-	J	ko:K02519	-	ko00000,ko03012,ko03029	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
APKMJDPJ_03305	1.26e-59	cvpA	-	-	S	ko:K03558	-	ko00000	Psort location CytoplasmicMembrane, score
APKMJDPJ_03306	0.0	sufB	-	-	O	ko:K09014	-	ko00000	COG0719 ABC-type transport system involved in Fe-S cluster assembly permease component
APKMJDPJ_03307	8.09e-183	-	-	-	-	-	-	-	-
APKMJDPJ_03308	9.74e-176	sufC	-	-	O	ko:K09013	-	ko00000,ko02000	COG0396 ABC-type transport system involved in Fe-S cluster assembly ATPase component
APKMJDPJ_03309	0.0	sufD	-	-	O	ko:K09015	-	ko00000	COG0719 ABC-type transport system involved in Fe-S cluster assembly permease component
APKMJDPJ_03310	2.38e-294	sufS	2.8.1.7, 4.4.1.16	-	E	ko:K11717	ko00450,ko01100,map00450,map01100	ko00000,ko00001,ko01000	Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family
APKMJDPJ_03311	1.03e-66	-	-	-	S	-	-	-	Belongs to the UPF0145 family
APKMJDPJ_03312	0.0	-	-	-	G	-	-	-	alpha-galactosidase
APKMJDPJ_03313	0.0	-	-	-	P	ko:K21572	-	ko00000,ko02000	non supervised orthologous group
APKMJDPJ_03314	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
APKMJDPJ_03316	6.81e-272	-	-	-	PT	-	-	-	Sigma factor regulatory protein, FecR PupR family
APKMJDPJ_03317	1.3e-122	-	-	-	K	ko:K03088	-	ko00000,ko03021	RNA polymerase sigma-70 factor
APKMJDPJ_03318	0.0	-	3.2.1.22	-	G	ko:K07407	ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603	ko00000,ko00001,ko01000	alpha-galactosidase
APKMJDPJ_03320	0.0	hppA	3.6.1.1	-	C	ko:K15987	ko00190,map00190	ko00000,ko00001,ko01000	Sodium pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for Na( ) movement across the membrane
APKMJDPJ_03322	0.0	-	-	-	S	-	-	-	Kelch motif
APKMJDPJ_03323	2.44e-147	rnhB	3.1.26.4	-	L	ko:K03470	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
APKMJDPJ_03324	2.55e-216	corA	-	-	P	ko:K03284	-	ko00000,ko02000	Psort location Cytoplasmic, score 8.96
APKMJDPJ_03325	0.0	gpmI	5.4.2.12	-	G	ko:K15633	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
APKMJDPJ_03326	1.62e-254	-	-	-	T	-	-	-	His Kinase A (phosphoacceptor) domain
APKMJDPJ_03327	0.0	-	-	-	T	-	-	-	His Kinase A (phosphoacceptor) domain
APKMJDPJ_03329	3.5e-143	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_03330	0.0	-	-	-	M	-	-	-	protein involved in outer membrane biogenesis
APKMJDPJ_03331	0.0	gyrB	5.99.1.3	-	L	ko:K02470	-	ko00000,ko01000,ko03032,ko03400	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
APKMJDPJ_03332	2.48e-48	rpsT	-	-	J	ko:K02968	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 16S ribosomal RNA
APKMJDPJ_03334	4.14e-173	recO	-	-	L	ko:K03584	ko03440,map03440	ko00000,ko00001,ko03400	Involved in DNA repair and RecF pathway recombination
APKMJDPJ_03335	5.09e-92	-	-	-	S	ko:K09117	-	ko00000	YqeY-like protein
APKMJDPJ_03336	3.82e-294	ftsZ	-	-	D	ko:K03531	ko04112,map04112	ko00000,ko00001,ko02048,ko03036,ko04812	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
APKMJDPJ_03337	2.54e-294	ftsA	-	-	D	ko:K03590	ko04112,map04112	ko00000,ko00001,ko03036,ko04812	Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
APKMJDPJ_03338	8.7e-177	ftsQ	-	-	M	ko:K03589	ko04112,map04112	ko00000,ko00001,ko03036	Psort location Cytoplasmic, score 8.96
APKMJDPJ_03339	0.0	murC	6.3.2.8	-	M	ko:K01924	ko00471,ko00550,ko01100,map00471,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Belongs to the MurCDEF family
APKMJDPJ_03340	3.43e-266	murG	2.4.1.227	GT28	M	ko:K02563	ko00550,ko01100,ko01502,ko04112,map00550,map01100,map01502,map04112	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
APKMJDPJ_03341	1.15e-297	ftsW	-	-	D	ko:K03588	ko04112,map04112	ko00000,ko00001,ko02000,ko03036	Belongs to the SEDS family
APKMJDPJ_03342	0.0	murD	6.3.2.9	-	M	ko:K01925	ko00471,ko00550,ko01100,map00471,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
APKMJDPJ_03343	8.44e-300	mraY	2.7.8.13	-	M	ko:K01000	ko00550,ko01100,ko01502,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
APKMJDPJ_03344	0.0	murE	6.3.2.13	-	M	ko:K01928	ko00300,ko00550,map00300,map00550	ko00000,ko00001,ko01000,ko01011	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
APKMJDPJ_03345	0.0	ftsI	3.4.16.4	-	M	ko:K03587	ko00550,ko01501,map00550,map01501	ko00000,ko00001,ko01000,ko01011,ko03036	Cell division protein FtsI penicillin-binding protein
APKMJDPJ_03346	3.6e-59	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_03347	2.18e-215	rsmH	2.1.1.199	-	J	ko:K03438	-	ko00000,ko01000,ko03009	Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
APKMJDPJ_03348	5.87e-109	mraZ	-	-	K	ko:K03925	-	ko00000	Belongs to the MraZ family
APKMJDPJ_03349	7.56e-109	-	-	-	L	-	-	-	regulation of translation
APKMJDPJ_03351	5.98e-116	-	-	-	K	ko:K03088	-	ko00000,ko03021	Belongs to the sigma-70 factor family. ECF subfamily
APKMJDPJ_03352	0.0	-	-	-	P	ko:K02014	-	ko00000,ko02000	COG COG1629 Outer membrane receptor proteins, mostly Fe transport
APKMJDPJ_03353	1.36e-116	-	-	-	S	-	-	-	Domain of unknown function (DUF4625)
APKMJDPJ_03354	9.54e-203	-	-	-	I	-	-	-	Acyl-transferase
APKMJDPJ_03355	1.66e-247	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_03356	0.0	dgt	3.1.5.1	-	F	ko:K01129	ko00230,map00230	ko00000,ko00001,ko01000	Psort location Cytoplasmic, score
APKMJDPJ_03357	5.61e-98	dut	3.6.1.23	-	F	ko:K01520	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA
APKMJDPJ_03358	0.0	-	-	-	S	-	-	-	Tetratricopeptide repeat protein
APKMJDPJ_03359	3.44e-126	-	-	-	S	-	-	-	COG NOG29315 non supervised orthologous group
APKMJDPJ_03360	8.22e-255	envC	-	-	D	-	-	-	Peptidase, M23
APKMJDPJ_03361	0.0	-	-	-	T	-	-	-	ATPase histidine kinase DNA gyrase B HSP90 domain protein
APKMJDPJ_03362	9.35e-285	-	-	-	G	-	-	-	Belongs to the glycosyl hydrolase 43 family
APKMJDPJ_03363	0.0	-	3.2.1.21	GH3	G	ko:K05349	ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110	ko00000,ko00001,ko01000	Glycosyl hydrolase family 3
APKMJDPJ_03364	1.27e-295	-	-	-	G	-	-	-	Glycosyl hydrolase family 76
APKMJDPJ_03365	0.0	-	-	-	G	-	-	-	Belongs to the glycosyl hydrolase 2 family
APKMJDPJ_03366	0.0	-	-	-	S	-	-	-	protein conserved in bacteria
APKMJDPJ_03367	0.0	-	-	-	S	-	-	-	protein conserved in bacteria
APKMJDPJ_03368	7.23e-294	-	-	-	G	-	-	-	Belongs to the glycosyl hydrolase 43 family
APKMJDPJ_03369	0.0	-	-	-	G	-	-	-	Belongs to the glycosyl hydrolase 2 family
APKMJDPJ_03370	0.0	-	-	-	G	-	-	-	COG NOG09951 non supervised orthologous group
APKMJDPJ_03371	0.0	-	-	-	P	-	-	-	COG NOG29071 non supervised orthologous group
APKMJDPJ_03372	0.0	-	3.2.1.24	GH38	G	ko:K01191	ko00511,map00511	ko00000,ko00001,ko01000,ko04131	Glycosyl hydrolase family 38 C-terminal domain protein
APKMJDPJ_03373	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
APKMJDPJ_03374	0.0	-	-	-	F	ko:K21572	-	ko00000,ko02000	COG NOG30008 non supervised orthologous group
APKMJDPJ_03375	2.29e-162	-	-	-	S	-	-	-	Protein of unknown function (DUF3823)
APKMJDPJ_03377	2.99e-253	arbA_2	3.2.1.99	GH43	G	ko:K06113	-	ko00000,ko01000	hydrolase, family 43
APKMJDPJ_03378	6.17e-288	-	-	-	M	-	-	-	Glycosyl hydrolase family 76
APKMJDPJ_03379	0.0	-	-	-	S	-	-	-	COG NOG26804 non supervised orthologous group
APKMJDPJ_03380	0.0	-	-	-	G	-	-	-	COG NOG09951 non supervised orthologous group
APKMJDPJ_03381	0.0	-	-	-	G	-	-	-	Glycosyl hydrolase family 92
APKMJDPJ_03382	0.0	-	-	-	S	ko:K09704	-	ko00000	Conserved protein
APKMJDPJ_03383	1.76e-283	mro_1	5.1.3.3	-	G	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Converts alpha-aldose to the beta-anomer
APKMJDPJ_03384	9.01e-296	-	-	-	S	ko:K07148	-	ko00000	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_03385	0.0	-	-	-	G	-	-	-	Concanavalin A-like lectin/glucanases superfamily
APKMJDPJ_03386	1.26e-248	-	-	-	G	-	-	-	Belongs to the glycosyl hydrolase 43 family
APKMJDPJ_03388	3.88e-266	-	-	-	S	-	-	-	6-bladed beta-propeller
APKMJDPJ_03390	1.45e-23	-	-	-	G	-	-	-	Belongs to the glycosyl hydrolase 43 family
APKMJDPJ_03391	1.1e-255	-	-	-	-	-	-	-	-
APKMJDPJ_03392	2.74e-288	-	-	-	I	-	-	-	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_03393	5.19e-133	-	-	-	T	-	-	-	Cyclic nucleotide-binding domain protein
APKMJDPJ_03394	0.0	-	-	-	S	-	-	-	Putative beta-lactamase-inhibitor-like, PepSY-like
APKMJDPJ_03395	1.25e-236	-	-	-	K	-	-	-	Periplasmic binding protein-like domain
APKMJDPJ_03396	0.0	-	-	-	S	ko:K09955	-	ko00000	Beta-L-arabinofuranosidase, GH127
APKMJDPJ_03397	0.0	-	-	-	G	-	-	-	Carbohydrate binding domain protein
APKMJDPJ_03398	0.0	-	3.2.1.40	-	G	ko:K05989	-	ko00000,ko01000	Alpha-L-rhamnosidase N-terminal domain protein
APKMJDPJ_03399	9.75e-255	argE	3.5.1.16	-	E	ko:K01438	ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	COG0624 Acetylornithine deacetylase Succinyl-diaminopimelate desuccinylase and related
APKMJDPJ_03400	0.0	fadD	6.2.1.3	-	I	ko:K01897	ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920	ko00000,ko00001,ko00002,ko01000,ko01004,ko04147	AMP-binding enzyme
APKMJDPJ_03401	1.62e-229	prfB	-	-	J	ko:K02836	-	ko00000,ko03012	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
APKMJDPJ_03402	5.24e-17	-	-	-	-	-	-	-	-
APKMJDPJ_03403	0.0	-	-	-	P	ko:K07221	-	ko00000,ko02000	Phosphate-selective porin O and P
APKMJDPJ_03404	1.97e-106	cyaA	4.6.1.1	-	S	ko:K01768	ko00230,ko02025,ko04113,ko04213,map00230,map02025,map04113,map04213	ko00000,ko00001,ko00002,ko01000	Psort location Cytoplasmic, score 8.96
APKMJDPJ_03405	5.22e-294	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_03406	0.0	-	-	-	M	-	-	-	TonB-dependent receptor
APKMJDPJ_03407	2.24e-305	-	-	-	O	-	-	-	protein conserved in bacteria
APKMJDPJ_03408	0.0	-	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 2 family
APKMJDPJ_03409	0.0	-	3.2.1.52	GH20	G	ko:K12373	ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142	ko00000,ko00001,ko00002,ko01000,ko03110	Glycosyl hydrolase family 20, catalytic domain
APKMJDPJ_03410	6.35e-228	-	-	-	S	-	-	-	Metalloenzyme superfamily
APKMJDPJ_03411	3.89e-309	-	-	-	O	-	-	-	Glycosyl Hydrolase Family 88
APKMJDPJ_03412	0.0	-	-	-	S	-	-	-	COG NOG25375 non supervised orthologous group
APKMJDPJ_03413	0.0	-	-	-	P	ko:K21572	-	ko00000,ko02000	Pfam:SusD
APKMJDPJ_03414	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
APKMJDPJ_03415	0.0	-	-	-	T	-	-	-	ATPase histidine kinase DNA gyrase B HSP90 domain protein
APKMJDPJ_03416	0.0	-	-	-	T	-	-	-	Two component regulator propeller
APKMJDPJ_03417	6.15e-182	-	-	-	E	-	-	-	lipolytic protein G-D-S-L family
APKMJDPJ_03418	0.0	-	-	-	S	-	-	-	protein conserved in bacteria
APKMJDPJ_03419	0.0	bglX	3.2.1.21	GH3	G	ko:K05349	ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110	ko00000,ko00001,ko01000	glycosyl hydrolase, family 3
APKMJDPJ_03420	0.0	-	-	-	S	ko:K21572	-	ko00000,ko02000	COG NOG26302 non supervised orthologous group
APKMJDPJ_03421	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
APKMJDPJ_03424	8.89e-59	-	-	-	K	-	-	-	Helix-turn-helix domain
APKMJDPJ_03425	1.62e-62	-	-	-	S	-	-	-	Toxin-antitoxin system, toxin component, RelE family
APKMJDPJ_03426	2.47e-163	-	-	-	S	-	-	-	COGs COG3943 Virulence protein
APKMJDPJ_03429	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
APKMJDPJ_03430	0.0	-	-	-	S	ko:K21572	-	ko00000,ko02000	SusD family
APKMJDPJ_03431	2.8e-258	-	-	-	M	-	-	-	peptidase S41
APKMJDPJ_03432	4.72e-207	-	-	-	S	-	-	-	COG NOG19130 non supervised orthologous group
APKMJDPJ_03433	0.0	parC	-	-	L	ko:K02621	-	ko00000,ko01000,ko02048,ko03032,ko03036	COG0188 Type IIA topoisomerase (DNA gyrase topo II topoisomerase IV) A subunit
APKMJDPJ_03434	0.0	glyQS	6.1.1.14	-	J	ko:K01880	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Catalyzes the attachment of glycine to tRNA(Gly)
APKMJDPJ_03435	5.22e-131	-	5.2.1.8	-	M	ko:K01802,ko:K03773	-	ko00000,ko01000,ko03110	FkbP-type peptidyl-prolyl cis-trans
APKMJDPJ_03436	4.05e-210	-	-	-	-	-	-	-	-
APKMJDPJ_03438	0.0	-	-	-	S	-	-	-	Tetratricopeptide repeats
APKMJDPJ_03439	2.01e-118	nimB	-	-	S	ko:K07005	-	ko00000	Pyridoxamine 5'-phosphate oxidase
APKMJDPJ_03440	5.59e-150	nrfH	-	-	C	ko:K15876	ko00910,ko01120,map00910,map01120	ko00000,ko00001,ko00002	COG COG3005 Nitrate TMAO reductases, membrane-bound tetraheme cytochrome c subunit
APKMJDPJ_03441	0.0	nrfA	1.7.2.2	-	C	ko:K03385	ko00910,ko01120,ko05132,map00910,map01120,map05132	ko00000,ko00001,ko00002,ko01000	Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process
APKMJDPJ_03442	7.85e-305	ccs1	-	-	O	-	-	-	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_03443	4.54e-201	ycf	-	-	O	-	-	-	COG COG0755 ABC-type transport system involved in cytochrome c biogenesis, permease component
APKMJDPJ_03444	0.0	-	-	-	M	-	-	-	COG NOG37029 non supervised orthologous group
APKMJDPJ_03445	8.5e-142	-	-	-	K	-	-	-	COG COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
APKMJDPJ_03446	0.0	estA	-	-	EV	-	-	-	beta-lactamase
APKMJDPJ_03447	1.14e-194	murQ	4.2.1.126	-	H	ko:K07106	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
APKMJDPJ_03448	3.58e-201	-	-	-	G	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_03449	7.5e-283	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_03450	0.0	-	-	-	C	ko:K18930	-	ko00000	FAD binding domain
APKMJDPJ_03451	0.0	-	-	-	S	-	-	-	Protein of unknown function (DUF1343)
APKMJDPJ_03452	0.0	-	-	-	EGP	ko:K08218	ko01501,map01501	ko00000,ko00001,ko00002,ko02000	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_03453	0.0	lytB	-	-	D	ko:K06381	-	ko00000	SpoIID LytB domain protein
APKMJDPJ_03454	1.47e-166	-	-	-	F	-	-	-	Domain of unknown function (DUF4922)
APKMJDPJ_03455	0.0	-	-	-	M	-	-	-	Glycosyltransferase, group 2 family protein
APKMJDPJ_03456	0.0	-	-	-	M	-	-	-	PQQ enzyme repeat
APKMJDPJ_03457	0.0	-	-	-	M	-	-	-	fibronectin type III domain protein
APKMJDPJ_03458	0.0	-	-	-	E	-	-	-	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
APKMJDPJ_03459	1.19e-290	-	-	-	S	-	-	-	protein conserved in bacteria
APKMJDPJ_03460	0.0	-	-	-	S	ko:K21572	-	ko00000,ko02000	SusD family
APKMJDPJ_03461	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
APKMJDPJ_03462	8.45e-202	-	-	-	G	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_03463	3.89e-241	asd	1.2.1.11	-	E	ko:K00133	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
APKMJDPJ_03464	0.0	-	-	-	PT	-	-	-	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_03465	2.07e-167	hypB	-	-	H	ko:K22132	-	ko00000,ko03016	involved in molybdopterin and thiamine biosynthesis family 1
APKMJDPJ_03466	8.39e-151	lolD	-	-	V	ko:K09810	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner
APKMJDPJ_03467	2.03e-218	-	-	-	L	-	-	-	Helix-hairpin-helix motif
APKMJDPJ_03468	0.0	-	-	-	P	ko:K03308	-	ko00000	Belongs to the sodium neurotransmitter symporter (SNF) (TC 2.A.22) family
APKMJDPJ_03469	8.97e-95	fjo27	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 9.46
APKMJDPJ_03470	0.0	murF	6.3.2.10	-	M	ko:K01929	ko00300,ko00550,ko01100,ko01502,map00300,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
APKMJDPJ_03471	5.96e-283	-	-	-	P	-	-	-	Transporter, major facilitator family protein
APKMJDPJ_03473	0.0	gadB	4.1.1.15, 4.1.2.27	-	E	ko:K01580,ko:K01634	ko00250,ko00410,ko00430,ko00600,ko00650,ko01100,ko01110,ko01120,ko02024,ko04071,ko04727,ko04940,map00250,map00410,map00430,map00600,map00650,map01100,map01110,map01120,map02024,map04071,map04727,map04940	ko00000,ko00001,ko00002,ko01000	Belongs to the group II decarboxylase family
APKMJDPJ_03474	3.28e-230	glsA	3.5.1.2	-	E	ko:K01425	ko00220,ko00250,ko00471,ko01100,ko04724,ko04727,ko04964,ko05206,ko05230,map00220,map00250,map00471,map01100,map04724,map04727,map04964,map05206,map05230	ko00000,ko00001,ko01000	Belongs to the glutaminase family
APKMJDPJ_03475	0.0	-	-	-	T	-	-	-	histidine kinase DNA gyrase B
APKMJDPJ_03476	5.95e-204	folP	2.5.1.15	-	H	ko:K00796	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	Psort location Cytoplasmic, score 8.96
APKMJDPJ_03477	5.79e-170	dacA	-	-	S	-	-	-	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
APKMJDPJ_03481	6.07e-222	-	-	-	S	-	-	-	protein BT4048 SWALL AAO79153 (EMBL AE016943) (373 aa) fasta scores E()
APKMJDPJ_03482	4.4e-09	-	-	-	S	-	-	-	NVEALA protein
APKMJDPJ_03483	3.59e-264	-	-	-	S	-	-	-	protein BT0659 SWALL AAO75766 (EMBL AE016928) (345 aa) fasta scores E()
APKMJDPJ_03484	1.07e-268	-	-	-	S	-	-	-	6-bladed beta-propeller
APKMJDPJ_03485	2.2e-09	-	-	-	S	-	-	-	NVEALA protein
APKMJDPJ_03486	1.92e-262	-	-	-	-	-	-	-	-
APKMJDPJ_03487	0.0	-	-	-	E	-	-	-	non supervised orthologous group
APKMJDPJ_03489	2.83e-287	-	-	-	-	-	-	-	-
APKMJDPJ_03490	2.37e-248	-	-	-	S	-	-	-	acetyltransferase involved in intracellular survival and related
APKMJDPJ_03491	9.41e-231	-	-	-	S	ko:K01163	-	ko00000	Conserved protein
APKMJDPJ_03492	1.71e-146	lrgB	-	-	M	-	-	-	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_03493	4.25e-71	lrgA	-	-	S	ko:K06518	-	ko00000,ko02000	Psort location CytoplasmicMembrane, score
APKMJDPJ_03495	9.92e-144	-	-	-	-	-	-	-	-
APKMJDPJ_03496	9.78e-188	-	-	-	-	-	-	-	-
APKMJDPJ_03497	0.0	-	-	-	E	-	-	-	Transglutaminase-like
APKMJDPJ_03498	3.81e-204	pta	2.3.1.8	-	C	ko:K00625,ko:K13788	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Psort location Cytoplasmic, score
APKMJDPJ_03499	9.57e-287	ackA	2.7.2.1	-	F	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
APKMJDPJ_03500	0.0	-	3.1.3.1	-	P	ko:K01077	ko00730,ko00790,ko01100,ko02020,map00730,map00790,map01100,map02020	ko00000,ko00001,ko00002,ko00537,ko01000,ko04147	Belongs to the alkaline phosphatase family
APKMJDPJ_03501	9.15e-68	yitW	-	-	S	-	-	-	FeS assembly SUF system protein
APKMJDPJ_03502	1.11e-192	lpxH	3.6.1.54	-	S	ko:K03269	ko00540,ko01100,map00540,map01100	ko00000,ko00001,ko00002,ko01000,ko01005	Psort location Cytoplasmic, score
APKMJDPJ_03503	1.56e-162	radC	-	-	E	ko:K03630	-	ko00000	Belongs to the UPF0758 family
APKMJDPJ_03504	1.39e-245	-	-	-	M	-	-	-	Psort location CytoplasmicMembrane, score 9.46
APKMJDPJ_03505	6.54e-132	efp	-	-	J	ko:K02356	-	ko00000,ko03012	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
APKMJDPJ_03506	1.36e-27	rpmH	-	-	J	ko:K02914	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL34 family
APKMJDPJ_03507	1.02e-145	spk1	2.7.11.1, 6.3.2.4	-	S	ko:K01921,ko:K08884,ko:K12132	ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01001,ko01011	PASTA domain protein
APKMJDPJ_03508	5.98e-267	rluD	5.4.99.23	-	J	ko:K06180	-	ko00000,ko01000,ko03009	Responsible for synthesis of pseudouridine from uracil
APKMJDPJ_03509	1.64e-236	ddl	6.3.2.4	-	F	ko:K01921	ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Belongs to the D-alanine--D-alanine ligase family
APKMJDPJ_03510	9.41e-279	-	-	-	I	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_03511	1.76e-164	-	-	-	S	-	-	-	COG NOG31798 non supervised orthologous group
APKMJDPJ_03512	2.89e-87	glpE	-	-	P	-	-	-	Rhodanese-like protein
APKMJDPJ_03513	1.7e-235	argF	2.1.3.11, 2.1.3.9	-	E	ko:K09065,ko:K13043	ko00220,ko01100,ko01230,map00220,map01100,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the ATCase OTCase family
APKMJDPJ_03514	1.49e-166	-	-	-	S	-	-	-	L,D-transpeptidase catalytic domain
APKMJDPJ_03515	1.61e-251	-	-	-	S	-	-	-	COG NOG25022 non supervised orthologous group
APKMJDPJ_03516	3.43e-300	proA	1.2.1.41	-	E	ko:K00147	ko00330,ko00332,ko01100,ko01110,ko01130,ko01230,map00330,map00332,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
APKMJDPJ_03517	2.05e-255	proB	2.7.2.11	-	E	ko:K00931	ko00330,ko00332,ko01100,ko01130,ko01230,map00330,map00332,map01100,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
APKMJDPJ_03518	4.63e-48	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_03519	9.56e-207	murI	5.1.1.3	-	M	ko:K01776	ko00471,ko01100,map00471,map01100	ko00000,ko00001,ko01000,ko01011	Provides the (R)-glutamate required for cell wall biosynthesis
APKMJDPJ_03520	2.23e-107	ompH	-	-	M	ko:K06142	-	ko00000	membrane
APKMJDPJ_03521	1.06e-106	ompH	-	-	M	ko:K06142	-	ko00000	membrane
APKMJDPJ_03522	0.0	yaeT	-	-	M	ko:K07277	-	ko00000,ko02000,ko03029	Outer membrane protein assembly complex, YaeT protein
APKMJDPJ_03523	9.45e-180	uppS	2.5.1.31	-	H	ko:K00806	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
APKMJDPJ_03524	0.0	-	-	-	G	-	-	-	COG NOG27066 non supervised orthologous group
APKMJDPJ_03525	2.5e-252	ribD	1.1.1.193, 3.5.4.26	-	H	ko:K11752	ko00740,ko01100,ko01110,ko02024,map00740,map01100,map01110,map02024	ko00000,ko00001,ko00002,ko01000	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
APKMJDPJ_03526	1.25e-201	prmC	2.1.1.297	-	J	ko:K02493	-	ko00000,ko01000,ko03012	Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
APKMJDPJ_03527	5.92e-107	recX	-	-	S	ko:K03565	-	ko00000,ko03400	Modulates RecA activity
APKMJDPJ_03528	3.06e-151	pyrE	2.4.2.10, 4.1.1.23	-	F	ko:K00762,ko:K13421	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
APKMJDPJ_03529	3.2e-91	-	-	-	E	-	-	-	oxidoreductase activity, acting on CH-OH group of donors
APKMJDPJ_03530	0.0	argH	4.3.2.1	-	E	ko:K01755	ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,map00220,map00250,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Psort location Cytoplasmic, score
APKMJDPJ_03533	6.96e-30	-	-	-	-	-	-	-	-
APKMJDPJ_03534	2.09e-39	-	-	-	KT	-	-	-	AAA domain
APKMJDPJ_03535	1.84e-184	-	-	-	KT	-	-	-	AAA domain
APKMJDPJ_03536	3.12e-61	-	-	-	K	-	-	-	Helix-turn-helix domain
APKMJDPJ_03537	7.16e-71	-	-	-	-	-	-	-	-
APKMJDPJ_03539	1.79e-137	-	-	-	L	-	-	-	Phage integrase family
APKMJDPJ_03540	0.0	tolA	-	-	M	ko:K03832	-	ko00000,ko02000	energy transducer activity
APKMJDPJ_03541	0.0	-	-	-	S	-	-	-	T5orf172
APKMJDPJ_03544	5.06e-215	-	-	-	-	-	-	-	-
APKMJDPJ_03545	3.74e-36	-	-	-	-	-	-	-	-
APKMJDPJ_03547	0.0	-	-	-	G	-	-	-	hydrolase, family 65, central catalytic
APKMJDPJ_03548	2.36e-38	-	-	-	-	-	-	-	-
APKMJDPJ_03549	0.0	acsA	6.2.1.1, 6.2.1.32	-	I	ko:K01895,ko:K08295	ko00010,ko00620,ko00627,ko00640,ko00680,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00620,map00627,map00640,map00680,map00720,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000,ko01004	Psort location Cytoplasmic, score
APKMJDPJ_03550	1.81e-127	-	-	-	K	-	-	-	Cupin domain protein
APKMJDPJ_03551	3.23e-173	proC	1.5.1.2	-	E	ko:K00286	ko00330,ko01100,ko01110,ko01130,ko01230,map00330,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
APKMJDPJ_03552	1.61e-275	argD	2.6.1.11, 2.6.1.17	-	E	ko:K00821	ko00220,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00220,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
APKMJDPJ_03553	3.59e-239	argC	1.2.1.38	-	E	ko:K00145	ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
APKMJDPJ_03554	1.32e-290	argG	6.3.4.5	-	E	ko:K01940	ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,ko05418,map00220,map00250,map01100,map01110,map01130,map01230,map05418	ko00000,ko00001,ko00002,ko01000,ko04147	argininosuccinate synthase
APKMJDPJ_03555	7.34e-140	-	-	-	J	-	-	-	Acetyltransferase (GNAT) domain
APKMJDPJ_03556	2.79e-102	argR	-	-	K	ko:K03402	-	ko00000,ko03000	Regulates arginine biosynthesis genes
APKMJDPJ_03559	2.41e-300	-	-	-	T	-	-	-	Histidine kinase-like ATPases
APKMJDPJ_03560	0.0	gadC	-	-	E	ko:K20265	ko02024,map02024	ko00000,ko00001,ko02000	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_03561	6.55e-167	-	-	-	P	-	-	-	Ion channel
APKMJDPJ_03562	1.78e-240	mdh	1.1.1.37	-	C	ko:K00024	ko00020,ko00270,ko00620,ko00630,ko00680,ko00710,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00270,map00620,map00630,map00680,map00710,map00720,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Belongs to the LDH MDH superfamily
APKMJDPJ_03563	4.9e-207	yitL	-	-	S	ko:K00243	-	ko00000	Psort location Cytoplasmic, score 8.96
APKMJDPJ_03564	1.25e-157	-	-	-	J	-	-	-	Domain of unknown function (DUF4476)
APKMJDPJ_03565	2.14e-156	-	-	-	J	-	-	-	Domain of unknown function (DUF4476)
APKMJDPJ_03566	7.81e-150	-	-	-	S	-	-	-	COG NOG36047 non supervised orthologous group
APKMJDPJ_03567	0.0	pbpF	-	-	M	-	-	-	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
APKMJDPJ_03568	0.0	-	-	-	L	-	-	-	COG0249 Mismatch repair ATPase (MutS family)
APKMJDPJ_03569	2.46e-126	-	-	-	-	-	-	-	-
APKMJDPJ_03570	0.0	-	3.2.1.22	-	G	ko:K07407	ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603	ko00000,ko00001,ko01000	alpha-galactosidase
APKMJDPJ_03571	0.0	-	3.2.1.177	GH31	G	ko:K01811	-	ko00000,ko01000	Belongs to the glycosyl hydrolase 31 family
APKMJDPJ_03572	0.0	-	-	-	E	ko:K21572	-	ko00000,ko02000	SusD family
APKMJDPJ_03573	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
APKMJDPJ_03574	2.79e-225	-	-	-	PT	-	-	-	Sigma factor regulatory protein, FecR PupR family
APKMJDPJ_03575	5.12e-123	-	-	-	K	ko:K03088	-	ko00000,ko03021	RNA polymerase sigma-70 factor
APKMJDPJ_03577	8.48e-303	-	-	-	MU	ko:K12340	ko01501,ko01503,ko02020,ko03070,ko04626,ko05133,map01501,map01503,map02020,map03070,map04626,map05133	ko00000,ko00001,ko00002,ko01504,ko02000,ko02044	Psort location OuterMembrane, score 10.00
APKMJDPJ_03578	3.74e-245	-	-	-	M	ko:K02005	-	ko00000	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
APKMJDPJ_03579	5.68e-299	macB_3	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	Efflux ABC transporter, permease protein
APKMJDPJ_03580	1.35e-299	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	Efflux ABC transporter, permease protein
APKMJDPJ_03581	3.98e-169	-	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
APKMJDPJ_03582	8.36e-231	glk	2.7.1.2	-	GK	ko:K00845	ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Psort location Cytoplasmic, score 9.26
APKMJDPJ_03583	5.68e-76	rplS	-	-	J	ko:K02884	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
APKMJDPJ_03584	3.54e-184	ushA	3.1.3.5	-	F	ko:K01081	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	5'-nucleotidase, C-terminal domain
APKMJDPJ_03585	9.99e-214	-	3.1.3.5, 3.6.1.45	-	F	ko:K01081,ko:K11751	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	Ser Thr phosphatase family protein
APKMJDPJ_03586	0.0	nagA	-	-	M	-	-	-	COG1680 Beta-lactamase class C and other penicillin binding
APKMJDPJ_03587	0.0	nagA	-	-	G	-	-	-	b-glycosidase, glycoside hydrolase family 3 protein
APKMJDPJ_03588	1.53e-19	yoqW	-	-	E	-	-	-	SOS response associated peptidase (SRAP)
APKMJDPJ_03589	1.94e-72	-	-	-	K	-	-	-	Cro/C1-type HTH DNA-binding domain
APKMJDPJ_03591	6.34e-90	-	-	-	K	-	-	-	helix_turn_helix, Lux Regulon
APKMJDPJ_03596	3.66e-151	-	-	-	-	-	-	-	-
APKMJDPJ_03597	2.01e-93	-	-	-	-	-	-	-	-
APKMJDPJ_03599	0.0	-	-	-	L	-	-	-	DNA primase
APKMJDPJ_03600	1.05e-88	ssb	-	-	L	ko:K03111	ko03030,ko03430,ko03440,map03030,map03430,map03440	ko00000,ko00001,ko03029,ko03032,ko03400	Single-stranded DNA-binding protein
APKMJDPJ_03601	6.35e-76	-	-	-	-	-	-	-	-
APKMJDPJ_03602	1.44e-72	-	-	-	-	-	-	-	-
APKMJDPJ_03603	2.54e-78	-	-	-	-	-	-	-	-
APKMJDPJ_03604	3.19e-105	-	-	-	-	-	-	-	-
APKMJDPJ_03605	8.15e-217	-	-	-	S	-	-	-	Phage prohead protease, HK97 family
APKMJDPJ_03606	5.17e-310	-	-	-	-	-	-	-	-
APKMJDPJ_03607	2.93e-176	-	-	-	-	-	-	-	-
APKMJDPJ_03608	6.45e-199	-	-	-	-	-	-	-	-
APKMJDPJ_03609	1.2e-105	-	-	-	-	-	-	-	-
APKMJDPJ_03610	1.75e-62	-	-	-	-	-	-	-	-
APKMJDPJ_03612	0.0	-	-	-	-	-	-	-	-
APKMJDPJ_03614	1.2e-184	-	2.1.1.72	-	V	ko:K03427	-	ko00000,ko01000,ko02048	type I restriction enzyme
APKMJDPJ_03615	9.83e-81	-	-	-	-	-	-	-	-
APKMJDPJ_03620	0.0	-	-	-	-	-	-	-	-
APKMJDPJ_03621	8.23e-58	-	-	-	-	-	-	-	-
APKMJDPJ_03622	2.76e-212	-	-	-	-	-	-	-	-
APKMJDPJ_03624	3.16e-93	-	-	-	S	-	-	-	Domain of unknown function (DUF5053)
APKMJDPJ_03628	1.27e-138	-	-	-	-	-	-	-	-
APKMJDPJ_03634	1.18e-114	-	-	-	-	-	-	-	-
APKMJDPJ_03635	1.4e-144	-	-	-	-	-	-	-	-
APKMJDPJ_03636	0.0	-	-	-	S	-	-	-	Phage-related minor tail protein
APKMJDPJ_03637	0.0	-	-	-	-	-	-	-	-
APKMJDPJ_03640	0.0	-	-	-	-	-	-	-	-
APKMJDPJ_03641	3.06e-262	-	-	-	-	-	-	-	-
APKMJDPJ_03642	7.15e-29	-	-	-	-	-	-	-	-
APKMJDPJ_03643	3.28e-69	-	-	-	-	-	-	-	-
APKMJDPJ_03645	4.58e-94	-	-	-	-	-	-	-	-
APKMJDPJ_03646	1.77e-281	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
APKMJDPJ_03648	0.0	ydaH	-	-	H	ko:K12942	-	ko00000	Psort location CytoplasmicMembrane, score
APKMJDPJ_03649	5.42e-169	-	-	-	T	-	-	-	Response regulator receiver domain
APKMJDPJ_03650	0.0	-	-	-	T	-	-	-	ATPase histidine kinase DNA gyrase B HSP90 domain protein
APKMJDPJ_03651	2.1e-217	prs	2.7.6.1	-	EF	ko:K00948	ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	COG0462 Phosphoribosylpyrophosphate synthetase
APKMJDPJ_03652	2.29e-35	-	2.7.11.1	-	S	ko:K12132	-	ko00000,ko01000,ko01001	phosphatidylinositol-4-phosphate 5-kinase family protein K00889
APKMJDPJ_03653	8.64e-312	-	-	-	S	-	-	-	Peptidase M16 inactive domain
APKMJDPJ_03654	9.93e-75	folK2	2.7.6.3	-	H	ko:K00950	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	COG NOG22185 non supervised orthologous group
APKMJDPJ_03655	0.0	mrcA	2.4.1.129, 3.4.16.4	GT51	M	ko:K05366	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01003,ko01011	COG5009 Membrane carboxypeptidase penicillin-binding protein
APKMJDPJ_03656	2.4e-102	-	-	-	L	-	-	-	COG NOG29624 non supervised orthologous group
APKMJDPJ_03658	2.25e-203	kdsB	2.7.7.38	-	H	ko:K00979	ko00540,ko01100,map00540,map01100	ko00000,ko00001,ko00002,ko01000,ko01005	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
APKMJDPJ_03659	0.0	-	-	-	G	-	-	-	Phosphoglycerate mutase family
APKMJDPJ_03660	1.84e-240	-	-	-	-	-	-	-	-
APKMJDPJ_03661	1.79e-112	-	-	-	S	-	-	-	COG NOG29454 non supervised orthologous group
APKMJDPJ_03662	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
APKMJDPJ_03663	0.0	-	-	-	S	ko:K21572	-	ko00000,ko02000	SusD family
APKMJDPJ_03665	2.07e-235	yfeX	-	-	P	ko:K07223	-	ko00000	Dyp-type peroxidase family
APKMJDPJ_03666	0.0	-	-	-	-	-	-	-	-
APKMJDPJ_03667	8.6e-225	-	-	-	-	-	-	-	-
APKMJDPJ_03668	0.0	-	-	-	S	-	-	-	Major fimbrial subunit protein type IV, Fimbrillin, C-terminal
APKMJDPJ_03669	1.17e-225	-	-	-	S	-	-	-	Fimbrillin-A associated anchor proteins Mfa1 and Mfa2
APKMJDPJ_03670	2.4e-136	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_03671	8.18e-53	-	-	-	S	-	-	-	COG NOG18433 non supervised orthologous group
APKMJDPJ_03673	9.66e-221	pyrB	2.1.3.2	-	F	ko:K00609	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the ATCase OTCase family
APKMJDPJ_03674	9.48e-108	pyrI	-	-	F	ko:K00610	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002	Involved in allosteric regulation of aspartate carbamoyltransferase
APKMJDPJ_03675	2.57e-143	-	-	-	S	-	-	-	COG COG1853 Conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
APKMJDPJ_03676	4.68e-179	-	-	-	S	-	-	-	COG NOG27381 non supervised orthologous group
APKMJDPJ_03677	1.05e-311	glyA	2.1.2.1	-	E	ko:K00600	ko00260,ko00460,ko00630,ko00670,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko01523,map00260,map00460,map00630,map00670,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map01523	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
APKMJDPJ_03679	4.43e-168	-	-	-	-	-	-	-	-
APKMJDPJ_03680	0.0	fhs	6.3.4.3	-	F	ko:K01938	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Formyltetrahydrofolate synthetase
APKMJDPJ_03681	0.0	-	-	-	T	-	-	-	His Kinase A (phosphoacceptor) domain
APKMJDPJ_03682	0.0	-	-	-	P	-	-	-	Psort location OuterMembrane, score
APKMJDPJ_03683	0.0	-	-	-	T	-	-	-	ATPase histidine kinase DNA gyrase B HSP90 domain protein
APKMJDPJ_03684	1.14e-160	-	-	-	K	-	-	-	COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
APKMJDPJ_03685	1.62e-187	-	-	-	-	-	-	-	-
APKMJDPJ_03686	6.15e-127	-	-	-	S	-	-	-	COG NOG28927 non supervised orthologous group
APKMJDPJ_03687	9.61e-215	rfbD	1.1.1.133	-	M	ko:K00067	ko00521,ko00523,ko01130,map00521,map00523,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
APKMJDPJ_03688	4.56e-243	fhuC	3.6.3.34	-	HP	ko:K02013	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	COG1120 ABC-type cobalamin Fe3 -siderophores transport systems, ATPase components
APKMJDPJ_03689	3.5e-228	-	-	-	P	ko:K02015	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
APKMJDPJ_03690	1.52e-284	-	-	-	P	ko:K02016	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG0614 ABC-type Fe3 -hydroxamate transport system, periplasmic component
APKMJDPJ_03691	4.49e-169	-	2.1.1.130, 2.1.1.151	-	H	ko:K03394	ko00860,ko01100,map00860,map01100	ko00000,ko00001,ko01000	COG2243 Precorrin-2 methylase
APKMJDPJ_03692	0.0	-	-	-	E	-	-	-	COG NOG09493 non supervised orthologous group
APKMJDPJ_03693	5.18e-149	-	-	-	U	ko:K05595	-	ko00000,ko02000	MarC family integral membrane protein
APKMJDPJ_03694	1.81e-308	arlS_2	-	-	T	-	-	-	histidine kinase DNA gyrase B
APKMJDPJ_03695	9.06e-159	cusR	-	-	T	ko:K07665	ko02020,map02020	ko00000,ko00001,ko00002,ko01504,ko02022	Transcriptional regulatory protein, C terminal
APKMJDPJ_03696	0.0	czcA_1	-	-	P	ko:K15726	-	ko00000,ko02000	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
APKMJDPJ_03697	3.58e-262	czcB	-	-	M	ko:K15727	-	ko00000,ko02000	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
APKMJDPJ_03698	9.82e-298	czcC	-	-	MU	ko:K15725	-	ko00000,ko02000	Outer membrane efflux protein
APKMJDPJ_03699	4.13e-83	-	-	-	O	-	-	-	Glutaredoxin
APKMJDPJ_03700	0.0	uvrD2	-	-	L	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_03701	2.05e-197	atpG	-	-	C	ko:K02115	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
APKMJDPJ_03702	0.0	atpA	3.6.3.14	-	C	ko:K02111	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko01000	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
APKMJDPJ_03703	1.78e-124	atpH	-	-	C	ko:K02113	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
APKMJDPJ_03704	3.45e-84	atpF	-	-	C	ko:K02109	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
APKMJDPJ_03705	1.12e-31	atpE	-	-	C	ko:K02110	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
APKMJDPJ_03706	8.36e-278	atpB	-	-	C	ko:K02108	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko03110	it plays a direct role in the translocation of protons across the membrane
APKMJDPJ_03707	6.34e-94	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
APKMJDPJ_03708	1.25e-51	atpC	-	-	C	ko:K02114	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	ATP synthase, delta epsilon subunit, beta-sandwich domain protein
APKMJDPJ_03709	0.0	atpD	3.6.3.14	-	C	ko:K02112	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko01000	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
APKMJDPJ_03710	1.4e-283	purT	2.1.2.2	-	F	ko:K08289	ko00230,ko00670,ko01100,ko01110,ko01130,map00230,map00670,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
APKMJDPJ_03711	4.19e-50	-	-	-	S	-	-	-	RNA recognition motif
APKMJDPJ_03712	0.0	-	-	-	H	-	-	-	COG NOG06391 non supervised orthologous group
APKMJDPJ_03713	0.0	relA	2.7.6.5, 3.1.7.2	-	KT	ko:K00951,ko:K01139	ko00230,map00230	ko00000,ko00001,ko01000,ko03009	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
APKMJDPJ_03714	1.29e-84	dgkA	2.7.1.107, 2.7.1.66	-	M	ko:K00887,ko:K00901	ko00550,ko00561,ko00564,ko01100,ko01110,ko04070,ko04072,ko05231,map00550,map00561,map00564,map01100,map01110,map04070,map04072,map05231	ko00000,ko00001,ko01000	Psort location CytoplasmicMembrane, score
APKMJDPJ_03716	7.33e-270	-	-	-	EGP	-	-	-	Transporter, major facilitator family protein
APKMJDPJ_03717	1.19e-192	panB	2.1.2.11	-	H	ko:K00606	ko00770,ko01100,ko01110,map00770,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate
APKMJDPJ_03718	6.81e-178	-	-	-	I	-	-	-	pectin acetylesterase
APKMJDPJ_03719	9.98e-246	-	1.3.5.2	-	F	ko:K00254	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor
APKMJDPJ_03720	3.3e-159	pgmB	-	-	S	-	-	-	HAD hydrolase, family IA, variant 3
APKMJDPJ_03721	2.47e-315	-	-	-	V	-	-	-	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_03722	0.0	-	-	-	V	-	-	-	ABC transporter, permease protein
APKMJDPJ_03723	0.0	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_03724	6.31e-155	-	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	bacteriocin export ABC transporter, lactococcin 972 group
APKMJDPJ_03725	0.0	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_03726	1.68e-154	-	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	bacteriocin export ABC transporter, lactococcin 972 group
APKMJDPJ_03727	0.0	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_03728	9.56e-206	-	-	-	S	-	-	-	Ser Thr phosphatase family protein
APKMJDPJ_03729	1.42e-158	-	-	-	S	-	-	-	COG NOG27188 non supervised orthologous group
APKMJDPJ_03730	5.66e-314	zraR_2	-	-	T	-	-	-	COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains
APKMJDPJ_03731	1.5e-312	-	-	-	T	-	-	-	ATPase histidine kinase DNA gyrase B HSP90 domain protein
APKMJDPJ_03732	3.15e-153	-	-	-	K	-	-	-	Crp-like helix-turn-helix domain
APKMJDPJ_03733	0.0	hcp	1.7.99.1	-	C	ko:K05601	ko00910,map00910	ko00000,ko00001,ko01000	Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O
APKMJDPJ_03734	7.63e-271	pyrP	-	-	F	ko:K02824	-	ko00000,ko02000	Permease family
APKMJDPJ_03735	0.0	cvrA	-	-	P	ko:K11105	-	ko00000,ko02000	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_03736	0.0	-	6.2.1.3	-	I	ko:K01897	ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920	ko00000,ko00001,ko00002,ko01000,ko01004,ko04147	COG COG1022 Long-chain acyl-CoA synthetases (AMP-forming)
APKMJDPJ_03737	3.04e-87	-	-	-	S	-	-	-	Protein of unknown function (DUF3037)
APKMJDPJ_03738	1.57e-186	-	-	-	DT	-	-	-	aminotransferase class I and II
APKMJDPJ_03739	0.0	ravA_1	-	-	S	ko:K03924	-	ko00000,ko01000	ATPase family associated with various cellular activities (AAA)
APKMJDPJ_03740	2.11e-308	-	-	-	S	-	-	-	von Willebrand factor (vWF) type A domain
APKMJDPJ_03741	0.0	-	-	-	S	ko:K21572	-	ko00000,ko02000	COG NOG26865 non supervised orthologous group
APKMJDPJ_03742	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
APKMJDPJ_03743	0.0	-	-	-	O	-	-	-	non supervised orthologous group
APKMJDPJ_03744	0.0	-	3.2.1.52	GH20	G	ko:K12373	ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142	ko00000,ko00001,ko00002,ko01000,ko03110	Glycosyl hydrolase family 20, catalytic domain
APKMJDPJ_03745	0.0	addA	-	-	L	-	-	-	Belongs to the helicase family. UvrD subfamily
APKMJDPJ_03746	0.0	-	-	-	L	-	-	-	DNA-dependent ATPase I and helicase II
APKMJDPJ_03747	9.13e-262	pleD	2.7.13.3	-	T	ko:K11527	-	ko00000,ko01000,ko01001,ko02022	Response regulator receiver domain protein
APKMJDPJ_03748	1.24e-234	-	4.1.1.35	-	GM	ko:K08678	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko00002,ko01000	NAD dependent epimerase dehydratase family
APKMJDPJ_03750	7.71e-228	-	-	-	-	-	-	-	-
APKMJDPJ_03751	2.4e-231	-	-	-	-	-	-	-	-
APKMJDPJ_03752	3.6e-241	-	-	-	S	-	-	-	COG NOG32009 non supervised orthologous group
APKMJDPJ_03753	0.0	-	-	-	S	-	-	-	COG NOG34047 non supervised orthologous group
APKMJDPJ_03754	0.0	-	-	-	M	-	-	-	COG NOG23378 non supervised orthologous group
APKMJDPJ_03755	1.13e-141	-	-	-	M	-	-	-	Protein of unknown function (DUF3575)
APKMJDPJ_03757	7.43e-130	ibrB	-	-	K	-	-	-	Psort location Cytoplasmic, score
APKMJDPJ_03758	0.0	-	-	-	S	-	-	-	Phosphoadenosine phosphosulfate reductase family
APKMJDPJ_03759	2.57e-90	-	-	-	S	-	-	-	COG NOG32529 non supervised orthologous group
APKMJDPJ_03760	2.65e-214	-	-	-	K	ko:K20968	ko02025,map02025	ko00000,ko00001,ko03000	Transcriptional regulator, AraC family
APKMJDPJ_03762	6.14e-105	-	-	-	K	ko:K03719	-	ko00000,ko03000,ko03036	Transcriptional regulator, AsnC family
APKMJDPJ_03763	1.73e-97	-	-	-	U	-	-	-	Protein conserved in bacteria
APKMJDPJ_03764	6.86e-205	thiD	2.7.1.49, 2.7.4.7	-	K	ko:K00941	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	transcriptional regulator (AraC family)
APKMJDPJ_03765	0.0	-	-	-	T	-	-	-	ATPase histidine kinase DNA gyrase B HSP90 domain protein
APKMJDPJ_03766	0.0	-	-	-	V	ko:K06147	-	ko00000,ko02000	COG1132 ABC-type multidrug transport system, ATPase and permease components
APKMJDPJ_03767	0.0	-	-	-	V	ko:K06147	-	ko00000,ko02000	COG1132 ABC-type multidrug transport system, ATPase and permease components
APKMJDPJ_03768	4.21e-206	tcmP	-	-	Q	-	-	-	COG3315 O-Methyltransferase involved in polyketide biosynthesis
APKMJDPJ_03769	6.45e-144	-	-	-	K	-	-	-	transcriptional regulator, TetR family
APKMJDPJ_03770	4.55e-61	-	-	-	-	-	-	-	-
APKMJDPJ_03772	3.55e-216	-	-	-	-	-	-	-	-
APKMJDPJ_03773	4.45e-225	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_03774	1.92e-185	-	-	-	S	-	-	-	HmuY protein
APKMJDPJ_03775	0.0	-	-	-	P	ko:K16089	-	ko00000,ko02000	Outer membrane receptor
APKMJDPJ_03776	2.32e-152	-	-	-	S	-	-	-	Domain of unknown function (DUF4903)
APKMJDPJ_03777	3.75e-114	-	-	-	-	-	-	-	-
APKMJDPJ_03778	0.0	-	-	-	-	-	-	-	-
APKMJDPJ_03779	0.0	-	-	-	H	-	-	-	Psort location OuterMembrane, score
APKMJDPJ_03781	1.35e-154	-	-	-	S	-	-	-	Outer membrane protein beta-barrel domain
APKMJDPJ_03782	0.0	-	3.4.21.102	-	M	ko:K03797	-	ko00000,ko01000,ko01002	Peptidase family S41
APKMJDPJ_03784	4.4e-268	-	-	-	MU	-	-	-	Outer membrane efflux protein
APKMJDPJ_03785	0.0	-	-	-	P	ko:K07787	ko02020,map02020	ko00000,ko00001,ko02000	AcrB/AcrD/AcrF family
APKMJDPJ_03786	3.61e-268	-	-	-	M	-	-	-	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
APKMJDPJ_03787	9.69e-114	-	-	-	-	-	-	-	-
APKMJDPJ_03788	4.75e-177	ddpX	3.4.13.22	-	M	ko:K08641	ko01502,ko02020,map01502,map02020	ko00000,ko00001,ko00002,ko01000,ko01002,ko01011,ko01504	Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
APKMJDPJ_03789	1.37e-291	-	-	-	L	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_03790	2.54e-92	-	-	-	S	-	-	-	Domain of unknown function (DUF4945)
APKMJDPJ_03791	0.0	-	-	-	S	ko:K21572	-	ko00000,ko02000	COG NOG27574 non supervised orthologous group
APKMJDPJ_03792	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
APKMJDPJ_03793	0.0	-	-	-	S	-	-	-	COG NOG11699 non supervised orthologous group
APKMJDPJ_03794	8.19e-316	-	-	-	EGP	-	-	-	Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family
APKMJDPJ_03795	0.0	-	-	-	T	-	-	-	cheY-homologous receiver domain
APKMJDPJ_03796	0.0	-	3.2.1.80	-	M	ko:K03332	ko00051,map00051	ko00000,ko00001,ko01000	Glycosyl hydrolases family 32
APKMJDPJ_03797	0.0	-	-	-	M	-	-	-	Psort location OuterMembrane, score
APKMJDPJ_03798	1.76e-233	-	3.1.3.2	-	S	ko:K14379	ko00740,ko01100,ko04142,ko04380,ko05323,map00740,map01100,map04142,map04380,map05323	ko00000,ko00001,ko01000	Purple acid phosphatase
APKMJDPJ_03800	0.0	mscM	-	-	M	-	-	-	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_03801	2.25e-215	yrbG	-	-	P	ko:K07301	-	ko00000,ko02000	K -dependent Na Ca exchanger
APKMJDPJ_03802	2.69e-276	yghO	-	-	K	-	-	-	COG NOG07967 non supervised orthologous group
APKMJDPJ_03803	0.0	parE	-	-	L	ko:K02622	-	ko00000,ko01000,ko02048,ko03032,ko03036	COG0187 Type IIA topoisomerase (DNA gyrase topo II topoisomerase IV) B subunit
APKMJDPJ_03804	8.49e-105	coaD	2.7.7.3	-	H	ko:K00954	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
APKMJDPJ_03805	0.0	ctpA	3.4.21.102	-	M	ko:K03797	-	ko00000,ko01000,ko01002	Belongs to the peptidase S41A family
APKMJDPJ_03806	1.71e-150	-	3.6.1.27	-	I	ko:K19302	ko00550,map00550	ko00000,ko00001,ko01000,ko01011	PAP2 superfamily
APKMJDPJ_03807	3.5e-219	-	-	-	K	-	-	-	transcriptional regulator (AraC family)
APKMJDPJ_03808	2.31e-164	sdhC	-	-	C	ko:K00241	ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002	Succinate dehydrogenase cytochrome B subunit, b558 family
APKMJDPJ_03809	0.0	sdhA	1.3.5.1, 1.3.5.4	-	C	ko:K00239	ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko05134,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map05134	ko00000,ko00001,ko00002,ko01000	COG1053 Succinate dehydrogenase fumarate reductase flavoprotein subunit
APKMJDPJ_03810	6.15e-184	frdB	1.3.5.1, 1.3.5.4	-	C	ko:K00240	ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	COG0479 Succinate dehydrogenase fumarate reductase Fe-S protein subunit
APKMJDPJ_03811	2.14e-281	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
APKMJDPJ_03812	3.42e-300	-	-	-	S	-	-	-	Domain of unknown function (DUF4374)
APKMJDPJ_03813	0.0	-	-	-	H	-	-	-	Psort location OuterMembrane, score
APKMJDPJ_03814	1.53e-208	-	-	-	K	-	-	-	Transcriptional regulator, AraC family
APKMJDPJ_03815	1.1e-231	-	-	-	S	-	-	-	Fimbrillin-like
APKMJDPJ_03816	5.18e-241	-	-	-	M	-	-	-	COG NOG24980 non supervised orthologous group
APKMJDPJ_03817	5.13e-267	dprA	-	-	LU	ko:K04096	-	ko00000	Rossmann fold nucleotide-binding protein involved in DNA uptake
APKMJDPJ_03818	1.66e-92	-	-	-	S	ko:K07107	-	ko00000,ko01000	acyl-CoA thioester hydrolase, YbgC YbaW family
APKMJDPJ_03819	4.62e-297	prtC	-	-	O	ko:K08303	ko05120,map05120	ko00000,ko00001,ko01000,ko01002	Psort location Cytoplasmic, score 8.96
APKMJDPJ_03820	2.62e-100	-	-	-	S	ko:K09924	-	ko00000	COG NOG19128 non supervised orthologous group
APKMJDPJ_03821	4.02e-237	dus	-	-	H	-	-	-	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
APKMJDPJ_03822	1.39e-231	-	-	-	I	-	-	-	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_03823	8.23e-247	-	5.1.3.2	-	M	ko:K01784	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000	NAD dependent epimerase dehydratase family
APKMJDPJ_03824	1.59e-210	fieF	-	-	P	-	-	-	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
APKMJDPJ_03825	0.0	rnr	-	-	J	ko:K12573,ko:K12585	ko03018,map03018	ko00000,ko00001,ko00002,ko01000,ko03016,ko03019	3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
APKMJDPJ_03827	1.88e-111	-	-	-	K	ko:K03088	-	ko00000,ko03021	Sigma-70, region 4
APKMJDPJ_03828	1.07e-137	-	-	-	-	-	-	-	-
APKMJDPJ_03829	1.19e-112	-	-	-	S	ko:K07005	-	ko00000	Pyridoxamine 5'-phosphate oxidase
APKMJDPJ_03830	3.22e-218	cysK	2.5.1.47	-	E	ko:K01738,ko:K12339	ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the cysteine synthase cystathionine beta- synthase family
APKMJDPJ_03831	2.62e-199	-	-	-	I	-	-	-	COG0657 Esterase lipase
APKMJDPJ_03832	0.0	-	-	-	S	-	-	-	Domain of unknown function (DUF4932)
APKMJDPJ_03833	1.64e-260	ychF	-	-	J	ko:K06942	-	ko00000,ko03009	ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
APKMJDPJ_03834	1.42e-218	panE	1.1.1.169	-	H	ko:K00077	ko00770,ko01100,ko01110,map00770,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
APKMJDPJ_03835	9.59e-210	lgt	-	-	M	-	-	-	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
APKMJDPJ_03836	1.52e-156	-	2.3.1.28	-	V	ko:K19271	-	br01600,ko00000,ko01000,ko01504	COG4845 Chloramphenicol O-acetyltransferase
APKMJDPJ_03837	0.0	mutS	-	-	L	ko:K03555	ko03430,map03430	ko00000,ko00001,ko03400	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
APKMJDPJ_03838	6.01e-272	-	-	-	S	-	-	-	Domain of unknown function (DUF4934)
APKMJDPJ_03839	0.0	leuS	6.1.1.4	-	J	ko:K01869	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Belongs to the class-I aminoacyl-tRNA synthetase family
APKMJDPJ_03840	7.02e-214	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
APKMJDPJ_03841	5.79e-138	rdgB	3.6.1.66	-	F	ko:K02428	ko00230,map00230	ko00000,ko00001,ko01000	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
APKMJDPJ_03843	8.15e-240	nadA	2.5.1.72	-	H	ko:K03517	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
APKMJDPJ_03844	5.02e-123	spoU	-	-	J	-	-	-	RNA methylase, SpoU family K00599
APKMJDPJ_03845	0.0	-	-	-	MU	-	-	-	Outer membrane efflux protein
APKMJDPJ_03846	3.42e-233	-	-	-	M	-	-	-	transferase activity, transferring glycosyl groups
APKMJDPJ_03847	1.06e-198	-	-	-	M	-	-	-	Glycosyltransferase like family 2
APKMJDPJ_03848	2.31e-122	-	-	-	-	-	-	-	-
APKMJDPJ_03849	0.0	-	-	-	S	-	-	-	Erythromycin esterase
APKMJDPJ_03851	0.0	-	-	-	S	-	-	-	Erythromycin esterase
APKMJDPJ_03852	3.39e-276	-	-	-	M	-	-	-	Glycosyl transferases group 1
APKMJDPJ_03853	1.2e-162	-	-	-	M	-	-	-	transferase activity, transferring glycosyl groups
APKMJDPJ_03854	5.79e-287	-	-	-	V	-	-	-	HlyD family secretion protein
APKMJDPJ_03855	0.0	-	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter, ATP-binding protein
APKMJDPJ_03856	6.7e-135	-	-	-	S	-	-	-	COG NOG14459 non supervised orthologous group
APKMJDPJ_03857	0.0	-	-	-	L	-	-	-	Psort location OuterMembrane, score
APKMJDPJ_03858	2.61e-188	-	-	-	C	-	-	-	radical SAM domain protein
APKMJDPJ_03859	7.57e-124	-	-	-	S	-	-	-	COG COG1853 Conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
APKMJDPJ_03860	0.0	-	3.1.6.1	-	P	ko:K01130	ko00140,ko00600,map00140,map00600	ko00000,ko00001,ko01000	COG COG3119 Arylsulfatase A and related enzymes
APKMJDPJ_03862	6.4e-142	piuB	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
APKMJDPJ_03863	0.0	-	-	-	P	ko:K02014	-	ko00000,ko02000	Carboxypeptidase regulatory-like domain
APKMJDPJ_03864	5.24e-161	sulP	-	-	P	ko:K03321	-	ko00000,ko02000	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_03866	2.02e-137	rbr	-	-	C	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_03867	0.0	nadB	1.4.3.16	-	H	ko:K00278	ko00250,ko00760,ko01100,map00250,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of L-aspartate to iminoaspartate
APKMJDPJ_03868	7.34e-86	-	-	-	S	-	-	-	COG NOG29403 non supervised orthologous group
APKMJDPJ_03869	0.0	lpdA	1.8.1.4	-	C	ko:K00382	ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000,ko04147	COG1249 Pyruvate 2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3)
APKMJDPJ_03870	0.0	dacB	3.4.16.4	-	M	ko:K07259	ko00550,map00550	ko00000,ko00001,ko01000,ko01002,ko01011	COG2027 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4)
APKMJDPJ_03871	0.0	scpC	2.8.3.18, 3.1.2.1	-	C	ko:K01067,ko:K18118	ko00020,ko00620,ko00650,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00620,map00650,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	COG0427 Acetyl-CoA hydrolase
APKMJDPJ_03872	2.22e-67	-	-	-	-	-	-	-	-
APKMJDPJ_03873	0.0	miaB	2.8.4.3	-	J	ko:K06168	-	ko00000,ko01000,ko03016	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
APKMJDPJ_03874	0.0	-	3.2.1.51	GH29	G	ko:K01206	ko00511,map00511	ko00000,ko00001,ko01000,ko04147	COG COG3669 Alpha-L-fucosidase
APKMJDPJ_03875	0.0	-	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 2 family
APKMJDPJ_03876	0.0	-	-	-	KT	-	-	-	AraC family
APKMJDPJ_03877	1.63e-267	-	-	-	-	-	-	-	-
APKMJDPJ_03878	2.68e-67	-	-	-	S	-	-	-	NVEALA protein
APKMJDPJ_03879	1.49e-225	-	-	-	S	-	-	-	TolB-like 6-blade propeller-like
APKMJDPJ_03880	4.34e-46	-	-	-	S	-	-	-	No significant database matches
APKMJDPJ_03881	4.3e-279	-	-	-	S	-	-	-	6-bladed beta-propeller
APKMJDPJ_03882	2.55e-17	-	-	-	S	-	-	-	protein BT4048 SWALL AAO79153 (EMBL AE016943) (373 aa) fasta scores E()
APKMJDPJ_03883	1.77e-261	-	-	-	-	-	-	-	-
APKMJDPJ_03884	7.36e-48	-	-	-	S	-	-	-	No significant database matches
APKMJDPJ_03885	1.99e-12	-	-	-	S	-	-	-	NVEALA protein
APKMJDPJ_03886	1.75e-278	-	-	-	S	-	-	-	6-bladed beta-propeller
APKMJDPJ_03887	1.17e-216	-	-	-	S	-	-	-	protein BT4048 SWALL AAO79153 (EMBL AE016943) (373 aa) fasta scores E()
APKMJDPJ_03889	2.71e-260	-	-	-	S	-	-	-	TolB-like 6-blade propeller-like
APKMJDPJ_03890	2.04e-256	-	-	-	S	-	-	-	protein BT0659 SWALL AAO75766 (EMBL AE016928) (345 aa) fasta scores E()
APKMJDPJ_03891	2.1e-283	-	-	-	-	-	-	-	-
APKMJDPJ_03892	4.32e-48	-	-	-	S	-	-	-	No significant database matches
APKMJDPJ_03893	1.59e-12	-	-	-	S	-	-	-	NVEALA protein
APKMJDPJ_03894	8.72e-259	-	-	-	S	-	-	-	TolB-like 6-blade propeller-like
APKMJDPJ_03895	6.22e-99	-	-	-	S	-	-	-	protein BT0659 SWALL AAO75766 (EMBL AE016928) (345 aa) fasta scores E()
APKMJDPJ_03896	1.23e-12	-	-	-	S	-	-	-	NVEALA protein
APKMJDPJ_03897	5.26e-281	-	-	-	S	-	-	-	6-bladed beta-propeller
APKMJDPJ_03898	3.61e-211	-	-	-	S	-	-	-	protein BT4048 SWALL AAO79153 (EMBL AE016943) (373 aa) fasta scores E()
APKMJDPJ_03899	3.5e-81	-	-	-	-	-	-	-	-
APKMJDPJ_03900	4.31e-312	-	-	-	S	-	-	-	Domain of unknown function (DUF4934)
APKMJDPJ_03901	2.28e-138	-	-	-	-	-	-	-	-
APKMJDPJ_03902	0.0	-	-	-	E	-	-	-	Transglutaminase-like
APKMJDPJ_03903	1.01e-222	-	-	-	H	-	-	-	Methyltransferase domain protein
APKMJDPJ_03904	8.27e-194	ftsX	-	-	D	ko:K09811	ko02010,map02010	ko00000,ko00001,ko00002,ko02000,ko03036	Belongs to the ABC-4 integral membrane protein family. FtsX subfamily
APKMJDPJ_03905	1.5e-48	fjo13	-	-	S	-	-	-	COG NOG19122 non supervised orthologous group
APKMJDPJ_03906	7.99e-183	uppP	3.6.1.27	-	V	ko:K06153	ko00550,map00550	ko00000,ko00001,ko01000,ko01011	Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
APKMJDPJ_03907	1.1e-168	truB	5.4.99.25	-	J	ko:K03177	-	ko00000,ko01000,ko03016	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
APKMJDPJ_03908	8.05e-258	queA	2.4.99.17	-	H	ko:K07568	-	ko00000,ko01000,ko03016	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
APKMJDPJ_03909	8.76e-104	folK	2.7.6.3	-	H	ko:K00950	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase
APKMJDPJ_03910	9.37e-17	-	-	-	-	-	-	-	-
APKMJDPJ_03911	7.96e-309	metK	2.5.1.6	-	H	ko:K00789	ko00270,ko01100,ko01110,ko01230,map00270,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
APKMJDPJ_03912	6.2e-141	yvdD	3.2.2.10	-	S	ko:K06966	ko00230,ko00240,map00230,map00240	ko00000,ko00001,ko01000	Belongs to the LOG family
APKMJDPJ_03913	6.12e-192	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
APKMJDPJ_03914	1.06e-179	hemD	4.2.1.75	-	H	ko:K01719	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	ko00000,ko00001,ko00002,ko01000	Uroporphyrinogen-III synthase
APKMJDPJ_03915	1.24e-72	rnpA	3.1.26.5	-	J	ko:K03536	-	ko00000,ko01000,ko03016	RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
APKMJDPJ_03916	2.87e-51	yidD	-	-	S	ko:K08998	-	ko00000	Could be involved in insertion of integral membrane proteins into the membrane
APKMJDPJ_03917	6.2e-155	-	-	-	L	ko:K03424	-	ko00000,ko01000	Psort location Cytoplasmic, score 8.96
APKMJDPJ_03918	0.0	tyrS	6.1.1.1	-	J	ko:K01866	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
APKMJDPJ_03919	0.0	-	-	-	M	ko:K08676	-	ko00000,ko01000,ko01002	Tricorn protease homolog
APKMJDPJ_03921	0.0	-	-	-	P	-	-	-	Type I phosphodiesterase / nucleotide pyrophosphatase
APKMJDPJ_03922	1.47e-210	kduI	5.3.1.17	-	G	ko:K01815	ko00040,map00040	ko00000,ko00001,ko01000	Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
APKMJDPJ_03923	9.78e-187	idnO	1.1.1.69	-	IQ	ko:K00046	-	ko00000,ko01000	Oxidoreductase, short chain dehydrogenase reductase family protein
APKMJDPJ_03924	6.05e-305	-	3.1.1.11	-	G	ko:K01051	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko00002,ko01000	COG NOG24911 non supervised orthologous group
APKMJDPJ_03925	1.24e-237	queG	1.17.99.6	-	C	ko:K18979	-	ko00000,ko01000,ko03016	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
APKMJDPJ_03926	1.26e-155	pgdA_1	-	-	G	-	-	-	Psort location Cytoplasmic, score
APKMJDPJ_03927	0.0	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_03930	4e-115	-	-	-	S	-	-	-	Domain of unknown function (DUF4469) with IG-like fold
APKMJDPJ_03931	3.39e-39	-	-	-	S	-	-	-	Domain of unknown function (DUF4469) with IG-like fold
APKMJDPJ_03933	4.21e-129	mntA	-	-	P	ko:K09815,ko:K11707	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG0803 ABC-type metal ion transport system, periplasmic component surface adhesin
APKMJDPJ_03934	8.12e-304	-	-	-	S	-	-	-	aa) fasta scores E()
APKMJDPJ_03935	1.36e-294	-	-	-	S	-	-	-	aa) fasta scores E()
APKMJDPJ_03936	3.98e-228	-	-	-	S	-	-	-	Domain of unknown function (DUF4934)
APKMJDPJ_03940	1.35e-102	-	-	-	-	-	-	-	-
APKMJDPJ_03941	1.41e-20	-	-	-	-	-	-	-	-
APKMJDPJ_03943	1.31e-52	-	-	-	-	-	-	-	-
APKMJDPJ_03944	1.09e-42	-	-	-	-	-	-	-	-
APKMJDPJ_03945	0.0	-	-	-	K	ko:K03497	-	ko00000,ko03000,ko03036,ko04812	Belongs to the ParB family
APKMJDPJ_03946	1.31e-244	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_03947	1.11e-50	-	-	-	-	-	-	-	-
APKMJDPJ_03948	0.0	actP	3.6.3.4, 3.6.3.54	-	P	ko:K01533,ko:K17686	ko01524,ko04016,map01524,map04016	ko00000,ko00001,ko01000	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_03949	1.71e-209	dapA	4.3.3.7	-	EM	ko:K01714	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
APKMJDPJ_03950	2.02e-213	pdxK	2.7.1.35	-	H	ko:K00868	ko00750,ko01100,map00750,map01100	ko00000,ko00001,ko01000	Pyridoxal kinase
APKMJDPJ_03951	4.34e-159	-	3.1.3.18	-	S	ko:K01091	ko00630,ko01100,ko01110,ko01130,map00630,map01100,map01110,map01130	ko00000,ko00001,ko01000	HAD-hyrolase-like
APKMJDPJ_03952	5.72e-283	aspC	2.6.1.1	-	E	ko:K00812	ko00220,ko00250,ko00270,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko01000,ko01007	COG0436 Aspartate tyrosine aromatic aminotransferase
APKMJDPJ_03953	7.94e-274	argD	2.6.1.11, 2.6.1.17	-	E	ko:K00821	ko00220,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00220,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
APKMJDPJ_03954	9.68e-221	-	-	-	S	-	-	-	esterase
APKMJDPJ_03955	0.0	feoB	-	-	P	ko:K04759	-	ko00000,ko02000	transporter of a GTP-driven Fe(2 ) uptake system
APKMJDPJ_03956	2.88e-130	-	-	-	K	-	-	-	Transcriptional regulator, AraC family
APKMJDPJ_03957	2.91e-92	-	-	-	MU	ko:K12340	ko01501,ko01503,ko02020,ko03070,ko04626,ko05133,map01501,map01503,map02020,map03070,map04626,map05133	ko00000,ko00001,ko00002,ko01504,ko02000,ko02044	efflux transmembrane transporter activity
APKMJDPJ_03958	8.46e-212	-	-	-	MU	-	-	-	PFAM Outer membrane efflux protein
APKMJDPJ_03959	0.0	-	-	-	V	-	-	-	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
APKMJDPJ_03960	1.08e-247	-	-	-	M	-	-	-	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
APKMJDPJ_03961	1.37e-308	-	-	-	T	ko:K07713	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	acetoacetate metabolism regulatory protein AtoC K07714
APKMJDPJ_03962	1.91e-144	-	-	-	S	-	-	-	RteC protein
APKMJDPJ_03963	3.48e-215	-	-	-	-	-	-	-	-
APKMJDPJ_03964	1e-39	-	-	-	-	-	-	-	-
APKMJDPJ_03965	2.35e-145	-	-	-	-	-	-	-	-
APKMJDPJ_03966	2.84e-73	-	-	-	-	-	-	-	-
APKMJDPJ_03967	5.51e-170	-	-	-	-	-	-	-	-
APKMJDPJ_03968	2.77e-18	-	-	-	-	-	-	-	-
APKMJDPJ_03970	4.68e-67	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_03971	1.35e-303	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
APKMJDPJ_03972	1.04e-45	-	-	-	S	-	-	-	Domain of unknown function (DUF4934)
APKMJDPJ_03973	7.29e-235	-	-	-	S	-	-	-	Domain of unknown function (DUF4934)
APKMJDPJ_03974	1.83e-302	-	-	-	S	-	-	-	6-bladed beta-propeller
APKMJDPJ_03975	3.14e-296	-	-	-	S	-	-	-	6-bladed beta-propeller
APKMJDPJ_03976	1.05e-38	-	-	-	-	-	-	-	-
APKMJDPJ_03977	0.0	-	-	-	S	-	-	-	Tetratricopeptide repeat
APKMJDPJ_03980	1.21e-147	-	-	-	-	-	-	-	-
APKMJDPJ_03981	1.4e-191	-	-	-	M	-	-	-	N-terminal domain of galactosyltransferase
APKMJDPJ_03982	2.16e-162	-	-	-	KT	-	-	-	Lanthionine synthetase C-like protein
APKMJDPJ_03983	8.74e-300	-	-	-	M	-	-	-	Glycosyl transferases group 1
APKMJDPJ_03985	2.11e-313	-	-	-	-	-	-	-	-
APKMJDPJ_03987	1.71e-308	-	-	-	-	-	-	-	-
APKMJDPJ_03988	0.0	-	-	-	C	ko:K06871	-	ko00000	Radical SAM superfamily
APKMJDPJ_03989	2.56e-311	-	-	-	C	ko:K06871	-	ko00000	4Fe-4S single cluster domain
APKMJDPJ_03990	0.0	-	-	-	S	-	-	-	radical SAM domain protein
APKMJDPJ_03991	9.8e-158	-	2.7.7.43, 2.7.7.92	-	H	ko:K21749	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Cytidylyltransferase
APKMJDPJ_03992	0.0	-	-	-	-	-	-	-	-
APKMJDPJ_03993	7.41e-228	-	-	-	M	-	-	-	Glycosyltransferase family 10 (fucosyltransferase) C-term
APKMJDPJ_03994	6.47e-242	-	-	-	M	-	-	-	Glycosyltransferase like family 2
APKMJDPJ_03996	2.35e-144	-	-	-	-	-	-	-	-
APKMJDPJ_03997	0.0	-	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter, ATP-binding protein
APKMJDPJ_03998	4.61e-308	-	-	-	V	-	-	-	HlyD family secretion protein
APKMJDPJ_03999	4.9e-283	-	-	-	M	-	-	-	Psort location OuterMembrane, score
APKMJDPJ_04000	2.74e-266	trpS	6.1.1.2	-	J	ko:K01867	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-I aminoacyl-tRNA synthetase family
APKMJDPJ_04001	0.0	carB	6.3.5.5	-	F	ko:K01955	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ)
APKMJDPJ_04003	6.97e-86	-	-	-	M	-	-	-	Polymer-forming cytoskeletal
APKMJDPJ_04004	2.04e-225	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
APKMJDPJ_04005	1.71e-301	-	-	-	S	-	-	-	Fimbrillin-A associated anchor proteins Mfa1 and Mfa2
APKMJDPJ_04006	5.61e-222	-	-	-	-	-	-	-	-
APKMJDPJ_04007	2.36e-148	-	-	-	M	-	-	-	Autotransporter beta-domain
APKMJDPJ_04008	0.0	-	-	-	MU	-	-	-	OmpA family
APKMJDPJ_04009	0.0	-	-	-	S	-	-	-	Calx-beta domain
APKMJDPJ_04010	0.0	-	-	-	S	-	-	-	Putative binding domain, N-terminal
APKMJDPJ_04011	0.0	-	-	-	-	-	-	-	-
APKMJDPJ_04012	1.15e-91	-	-	-	-	-	-	-	-
APKMJDPJ_04013	0.0	-	3.2.1.35	-	G	ko:K01197	ko00531,ko01100,map00531,map01100	ko00000,ko00001,ko00002,ko00536,ko00537,ko01000,ko02042	beta-N-acetylglucosaminidase
APKMJDPJ_04014	5.67e-188	yaaA	-	-	S	ko:K09861	-	ko00000	Belongs to the UPF0246 family
APKMJDPJ_04015	1.61e-125	-	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	Maltose acetyltransferase
APKMJDPJ_04019	0.0	bga	3.2.1.23	-	G	ko:K12308	ko00052,map00052	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 35 family
APKMJDPJ_04020	0.0	purB	4.3.2.2	-	F	ko:K01756	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Psort location Cytoplasmic, score
APKMJDPJ_04021	1.71e-224	rluB	5.4.99.22	-	J	ko:K06178	-	ko00000,ko01000,ko03009	Belongs to the pseudouridine synthase RsuA family
APKMJDPJ_04022	0.0	asnS	6.1.1.22	-	J	ko:K01893	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Psort location Cytoplasmic, score
APKMJDPJ_04023	3.95e-118	-	-	-	S	-	-	-	COG NOG27649 non supervised orthologous group
APKMJDPJ_04025	6.67e-108	rplM	-	-	J	ko:K02871	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
APKMJDPJ_04026	1.76e-82	rpsI	-	-	J	ko:K02996	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uS9 family
APKMJDPJ_04027	9.32e-188	rpsB	-	-	J	ko:K02967	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uS2 family
APKMJDPJ_04028	2.88e-224	tsf	-	-	J	ko:K02357	-	ko00000,ko03012,ko03029	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
APKMJDPJ_04029	3.18e-77	-	-	-	J	ko:K03113	ko03013,map03013	ko00000,ko00001,ko03012	COG0023 Translation initiation factor 1 (eIF-1 SUI1) and related
APKMJDPJ_04030	1.83e-156	rex	-	-	K	ko:K01926	-	ko00000,ko03000	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
APKMJDPJ_04031	4.55e-149	fahA	-	-	Q	-	-	-	2-hydroxyhepta-2,4-diene-1,7-dioate isomerase, fumarylacetoacetate hydrolase family K01828
APKMJDPJ_04032	6.59e-111	ispF	4.6.1.12	-	H	ko:K01770	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP)
APKMJDPJ_04033	6.81e-251	-	-	-	S	-	-	-	Ser Thr phosphatase family protein
APKMJDPJ_04034	1.52e-206	-	-	-	S	-	-	-	COG NOG24904 non supervised orthologous group
APKMJDPJ_04035	3.64e-275	mnmA	2.8.1.13	-	J	ko:K00566	ko04122,map04122	ko00000,ko00001,ko01000,ko03016	Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
APKMJDPJ_04036	0.0	aprN	-	-	M	-	-	-	Belongs to the peptidase S8 family
APKMJDPJ_04037	1.12e-236	xseA	3.1.11.6	-	L	ko:K03601	ko03430,map03430	ko00000,ko00001,ko01000,ko03400	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
APKMJDPJ_04038	1.27e-37	xseB	3.1.11.6	-	L	ko:K03602	ko03430,map03430	ko00000,ko00001,ko01000,ko03400	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
APKMJDPJ_04039	1.14e-255	ilvE	2.6.1.42	-	EH	ko:K00826	ko00270,ko00280,ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00270,map00280,map00290,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	COG0115 Branched-chain amino acid aminotransferase 4-amino-4-deoxychorismate lyase
APKMJDPJ_04040	3.58e-196	-	2.5.1.105	-	S	ko:K06897	ko00790,map00790	ko00000,ko00001,ko01000	Metallo-beta-lactamase superfamily
APKMJDPJ_04041	5.69e-185	trmB	2.1.1.33	-	J	ko:K03439	-	ko00000,ko01000,ko03016	Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
APKMJDPJ_04042	4.34e-261	mrp	-	-	D	ko:K03593	-	ko00000,ko03029,ko03036	Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP
APKMJDPJ_04043	0.0	-	-	-	CO	-	-	-	COG NOG24773 non supervised orthologous group
APKMJDPJ_04044	0.0	-	-	-	U	-	-	-	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
APKMJDPJ_04045	1.67e-79	-	-	-	K	-	-	-	Transcriptional regulator
APKMJDPJ_04046	4.33e-183	-	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase
APKMJDPJ_04047	2.75e-163	-	-	-	E	-	-	-	COG2755 Lysophospholipase L1 and related
APKMJDPJ_04048	0.0	-	3.2.1.20	GH31	M	ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	COG NOG06228 non supervised orthologous group
APKMJDPJ_04049	3.81e-293	-	-	-	V	ko:K01992	-	ko00000,ko00002,ko02000	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_04050	2.71e-279	-	-	-	CP	ko:K01992	-	ko00000,ko00002,ko02000	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_04051	7.24e-218	-	-	-	M	ko:K01993	-	ko00000	Auxiliary transport protein, membrane fusion protein (MFP) family protein
APKMJDPJ_04052	5.41e-300	-	-	-	MU	-	-	-	Psort location OuterMembrane, score
APKMJDPJ_04053	0.0	-	-	-	H	-	-	-	Outer membrane protein beta-barrel family
APKMJDPJ_04054	2.57e-127	-	-	-	K	ko:K03088	-	ko00000,ko03021	RNA polymerase sigma-70 factor, ECF subfamily
APKMJDPJ_04055	8.6e-222	-	-	-	PT	-	-	-	Sigma factor regulatory protein, FecR PupR family
APKMJDPJ_04056	1.27e-191	-	-	-	S	-	-	-	COG NOG11650 non supervised orthologous group
APKMJDPJ_04057	1.59e-217	mdh	1.1.1.37	-	C	ko:K00024	ko00020,ko00270,ko00620,ko00630,ko00680,ko00710,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00270,map00620,map00630,map00680,map00710,map00720,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible oxidation of malate to oxaloacetate
APKMJDPJ_04058	0.0	-	-	-	M	-	-	-	Tricorn protease homolog
APKMJDPJ_04059	1.71e-78	-	-	-	K	-	-	-	transcriptional regulator
APKMJDPJ_04060	0.0	-	-	-	KT	-	-	-	BlaR1 peptidase M56
APKMJDPJ_04061	0.0	-	-	-	Q	-	-	-	N-terminal domain of BNR-repeat neuraminidase
APKMJDPJ_04062	9.54e-85	-	-	-	-	-	-	-	-
APKMJDPJ_04063	0.0	-	-	-	F	ko:K21572	-	ko00000,ko02000	Pfam:SusD
APKMJDPJ_04064	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
APKMJDPJ_04065	4.5e-233	-	-	-	PT	-	-	-	Domain of unknown function (DUF4974)
APKMJDPJ_04066	3.35e-125	-	-	-	K	ko:K03088	-	ko00000,ko03021	Belongs to the sigma-70 factor family. ECF subfamily
APKMJDPJ_04068	0.0	-	-	-	-	-	-	-	-
APKMJDPJ_04070	2.29e-292	gluP	-	-	G	ko:K02429	-	ko00000,ko02000	Transporter, major facilitator family protein
APKMJDPJ_04071	5.89e-173	yfkO	-	-	C	-	-	-	Nitroreductase family
APKMJDPJ_04072	3.42e-167	-	-	-	S	-	-	-	DJ-1/PfpI family
APKMJDPJ_04074	1.71e-204	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_04075	0.0	nhaS3	-	-	P	-	-	-	Sodium/hydrogen exchanger family
APKMJDPJ_04076	2.25e-171	nanM	-	-	S	-	-	-	COG NOG23382 non supervised orthologous group
APKMJDPJ_04077	0.0	-	-	-	S	-	-	-	COG NOG26034 non supervised orthologous group
APKMJDPJ_04078	2.44e-286	-	-	-	I	-	-	-	COG NOG24984 non supervised orthologous group
APKMJDPJ_04079	1.85e-104	nlpE	-	-	MP	-	-	-	lipoprotein NlpE involved in copper resistance
APKMJDPJ_04080	0.0	-	-	-	MU	-	-	-	Psort location OuterMembrane, score
APKMJDPJ_04081	0.0	-	-	-	V	-	-	-	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
APKMJDPJ_04082	1.16e-256	-	-	-	M	-	-	-	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
APKMJDPJ_04083	1.17e-213	-	-	-	K	-	-	-	transcriptional regulator (AraC family)
APKMJDPJ_04084	3.01e-297	pepC	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	Peptidase C1-like family
APKMJDPJ_04085	5.22e-173	-	-	-	K	-	-	-	Response regulator receiver domain protein
APKMJDPJ_04086	5.68e-279	-	-	-	T	-	-	-	Histidine kinase
APKMJDPJ_04087	1.76e-167	-	-	-	S	-	-	-	Psort location OuterMembrane, score
APKMJDPJ_04089	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
APKMJDPJ_04090	0.0	-	-	-	S	ko:K21572	-	ko00000,ko02000	SusD family
APKMJDPJ_04091	0.0	-	3.2.1.51	GH29	G	ko:K01206	ko00511,map00511	ko00000,ko00001,ko01000,ko04147	F5 8 type C domain protein
APKMJDPJ_04092	4.02e-204	etfB	-	-	C	ko:K03521	-	ko00000	COG2086 Electron transfer flavoprotein beta subunit
APKMJDPJ_04093	9.24e-246	etfA	-	-	C	ko:K03522	-	ko00000,ko04147	Psort location Cytoplasmic, score 8.96
APKMJDPJ_04094	0.0	acd	-	-	C	-	-	-	Acyl-CoA dehydrogenase, C-terminal domain
APKMJDPJ_04095	0.0	-	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	beta-galactosidase
APKMJDPJ_04096	5.17e-70	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_04097	1.59e-185	dnaJ2	-	-	O	ko:K03686,ko:K05516	-	ko00000,ko03029,ko03036,ko03110	Psort location Cytoplasmic, score
APKMJDPJ_04098	0.0	-	-	-	T	-	-	-	His Kinase A (phosphoacceptor) domain
APKMJDPJ_04099	0.0	eptA	-	-	S	-	-	-	lipid A phosphoethanolamine transferase, associated with polymyxin resistance
APKMJDPJ_04100	3.46e-309	-	-	-	M	-	-	-	COG NOG06295 non supervised orthologous group
APKMJDPJ_04102	0.0	-	-	-	CO	-	-	-	Redoxin
APKMJDPJ_04103	1.73e-249	ltaE	4.1.2.48	-	E	ko:K01620	ko00260,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko01000	Psort location Cytoplasmic, score 8.96
APKMJDPJ_04104	7.88e-79	-	-	-	-	-	-	-	-
APKMJDPJ_04105	9.71e-127	-	-	-	K	ko:K03088	-	ko00000,ko03021	Belongs to the sigma-70 factor family. ECF subfamily
APKMJDPJ_04106	4.62e-89	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 9.46
APKMJDPJ_04107	1.02e-46	-	-	-	S	-	-	-	COG NOG33517 non supervised orthologous group
APKMJDPJ_04108	0.0	poxB	1.2.5.1, 2.2.1.6	-	C	ko:K00156,ko:K01652	ko00290,ko00620,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00620,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the TPP enzyme family
APKMJDPJ_04109	1.27e-135	-	-	-	S	-	-	-	NADPH-dependent FMN reductase
APKMJDPJ_04110	3.48e-106	-	-	-	S	-	-	-	CarboxypepD_reg-like domain
APKMJDPJ_04111	5.01e-129	-	-	-	S	-	-	-	CarboxypepD_reg-like domain
APKMJDPJ_04112	1.15e-290	-	-	-	S	-	-	-	6-bladed beta-propeller
APKMJDPJ_04113	0.0	groL	-	-	O	ko:K04077	ko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
APKMJDPJ_04114	5.38e-57	groS	-	-	O	ko:K04078	-	ko00000,ko03029,ko03110	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
APKMJDPJ_04115	3.29e-188	-	-	-	-	-	-	-	-
APKMJDPJ_04117	2.7e-280	-	-	-	S	-	-	-	Domain of unknown function (DUF5031)
APKMJDPJ_04119	6.07e-199	-	-	-	-	-	-	-	-
APKMJDPJ_04120	0.0	-	-	-	P	-	-	-	CarboxypepD_reg-like domain
APKMJDPJ_04121	3.41e-130	-	-	-	M	-	-	-	non supervised orthologous group
APKMJDPJ_04122	2.37e-218	-	2.7.4.1	-	S	ko:K22468	ko00190,ko03018,map00190,map03018	ko00000,ko00001,ko01000,ko03019	Polyphosphate kinase 2 (PPK2)
APKMJDPJ_04124	2.55e-131	-	-	-	-	-	-	-	-
APKMJDPJ_04125	1.39e-111	-	-	-	K	ko:K03088	-	ko00000,ko03021	Belongs to the sigma-70 factor family. ECF subfamily
APKMJDPJ_04126	1.54e-24	-	-	-	-	-	-	-	-
APKMJDPJ_04127	3.16e-241	-	-	-	S	ko:K07027	-	ko00000,ko02000	Lysylphosphatidylglycerol synthase TM region
APKMJDPJ_04128	1.83e-281	-	-	-	M	-	-	-	Glycosyl transferase 4-like domain
APKMJDPJ_04129	0.0	-	-	-	G	-	-	-	Glycosyl hydrolase family 92
APKMJDPJ_04130	0.0	-	-	-	EU	-	-	-	Peptidase, S9A B C family, catalytic domain protein
APKMJDPJ_04131	0.0	hisS	6.1.1.21	-	J	ko:K01892	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Psort location Cytoplasmic, score
APKMJDPJ_04132	0.0	-	-	-	E	-	-	-	Transglutaminase-like superfamily
APKMJDPJ_04133	7.95e-238	-	-	-	S	-	-	-	6-bladed beta-propeller
APKMJDPJ_04134	1.68e-156	-	-	-	S	ko:K06973	-	ko00000	neutral zinc metallopeptidase
APKMJDPJ_04135	0.0	-	3.2.1.51	GH29	G	ko:K01206	ko00511,map00511	ko00000,ko00001,ko01000,ko04147	Alpha-L-fucosidase
APKMJDPJ_04136	2.55e-315	purA	6.3.4.4	-	F	ko:K01939	ko00230,ko00250,ko01100,map00230,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
APKMJDPJ_04137	6.05e-113	fur	-	-	P	ko:K03711	-	ko00000,ko03000	Belongs to the Fur family
APKMJDPJ_04138	0.0	-	-	-	M	-	-	-	Dolichyl-phosphate-mannose-protein mannosyltransferase
APKMJDPJ_04139	4.32e-155	-	-	-	L	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_04140	0.0	-	3.4.14.4	-	S	ko:K01277	-	ko00000,ko01000,ko01002	Peptidase family M49
APKMJDPJ_04141	2.71e-103	-	-	-	K	-	-	-	transcriptional regulator (AraC
APKMJDPJ_04142	0.0	recQ3	3.6.4.12	-	L	ko:K03654	ko03018,map03018	ko00000,ko00001,ko01000,ko03400	ATP-dependent DNA helicase
APKMJDPJ_04143	4.37e-81	-	-	-	S	-	-	-	COG COG0457 FOG TPR repeat
APKMJDPJ_04144	9.3e-223	cysK	2.5.1.47	-	E	ko:K01738,ko:K12339	ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the cysteine synthase cystathionine beta- synthase family
APKMJDPJ_04145	0.0	ltaS2	-	-	M	-	-	-	Psort location CytoplasmicMembrane, score
APKMJDPJ_04146	1.24e-159	ybjG	3.6.1.27	-	I	ko:K19302	ko00550,map00550	ko00000,ko00001,ko01000,ko01011	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_04148	0.0	-	-	-	H	ko:K02014	-	ko00000,ko02000	TonB dependent receptor
APKMJDPJ_04149	2.6e-249	-	-	-	-	-	-	-	-
APKMJDPJ_04150	0.0	-	-	-	F	ko:K21572	-	ko00000,ko02000	Pfam:SusD
APKMJDPJ_04151	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
APKMJDPJ_04152	7.95e-250	wcfX	5.1.3.6	-	M	ko:K08679	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	NAD dependent epimerase dehydratase family
APKMJDPJ_04153	0.0	-	-	-	M	-	-	-	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
APKMJDPJ_04154	9.85e-154	-	-	-	S	-	-	-	Lipid A Biosynthesis N-terminal domain
APKMJDPJ_04155	4.01e-181	-	-	-	S	-	-	-	Glycosyltransferase like family 2
APKMJDPJ_04156	7.78e-261	leuB	1.1.1.85	-	CE	ko:K00052	ko00290,ko00660,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map01100,map01110,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate
APKMJDPJ_04157	0.0	leuA_1	2.3.1.182	-	E	ko:K09011	ko00290,ko00660,ko01100,ko01210,ko01230,map00290,map00660,map01100,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Belongs to the alpha-IPM synthase homocitrate synthase family
APKMJDPJ_04158	2.1e-141	leuD	4.2.1.33, 4.2.1.35	-	E	ko:K01704	ko00290,ko00660,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map01100,map01110,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
APKMJDPJ_04160	0.0	leuC	4.2.1.33, 4.2.1.35	-	H	ko:K01703	ko00290,ko00660,ko00966,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map00966,map01100,map01110,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
APKMJDPJ_04161	0.0	leuA	2.3.3.13	-	E	ko:K01649	ko00290,ko00620,ko01100,ko01110,ko01210,ko01230,map00290,map00620,map01100,map01110,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
APKMJDPJ_04162	2.74e-32	-	-	-	-	-	-	-	-
APKMJDPJ_04163	5.89e-126	aroK	2.7.1.71	-	F	ko:K00891	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
APKMJDPJ_04165	1.12e-147	-	-	-	S	ko:K07078	-	ko00000	oxidoreductase related to nitroreductase
APKMJDPJ_04166	1.78e-153	rnhA	3.1.26.4	-	C	ko:K03469	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	double-stranded RNA RNA-DNA hybrid binding protein
APKMJDPJ_04167	4.42e-314	-	-	-	-	-	-	-	-
APKMJDPJ_04168	0.0	msbA	-	-	V	ko:K06147,ko:K11085	ko02010,map02010	ko00000,ko00001,ko01000,ko02000	COG1132 ABC-type multidrug transport system, ATPase and permease components
APKMJDPJ_04169	1.83e-256	-	-	-	M	-	-	-	Glycosyltransferase like family 2
APKMJDPJ_04170	2.53e-200	-	-	-	S	-	-	-	Glycosyltransferase, group 2 family protein
APKMJDPJ_04171	8.66e-256	lpsA	-	-	S	-	-	-	Glycosyl transferase family 90
APKMJDPJ_04172	1.34e-233	gspA	-	-	M	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_04173	3.29e-172	-	-	-	T	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_04174	1.62e-175	-	-	-	S	-	-	-	Glycosyl transferase, family 2
APKMJDPJ_04175	3.01e-251	pdxB	1.1.1.290	-	H	ko:K03473	ko00750,ko01100,map00750,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of erythronate-4-phosphate to 3- hydroxy-2-oxo-4-phosphonooxybutanoate
APKMJDPJ_04176	4.04e-149	purN	2.1.2.2	-	F	ko:K11175	ko00230,ko00670,ko01100,ko01110,ko01130,map00230,map00670,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
APKMJDPJ_04177	1.5e-44	acpP	-	-	IQ	ko:K02078	-	ko00000,ko00001	Carrier of the growing fatty acid chain in fatty acid biosynthesis
APKMJDPJ_04178	1.85e-302	fabF	2.3.1.179	-	I	ko:K09458	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
APKMJDPJ_04179	1.06e-199	rnc	3.1.26.3	-	J	ko:K03685	ko03008,ko05205,map03008,map05205	ko00000,ko00001,ko01000,ko03009,ko03019,ko03036	Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
APKMJDPJ_04180	2.35e-242	pfkA	2.7.1.11, 2.7.1.90	-	F	ko:K21071	ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130	ko00000,ko00001,ko01000	Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
APKMJDPJ_04181	0.0	-	-	-	H	-	-	-	GH3 auxin-responsive promoter
APKMJDPJ_04182	1.6e-272	mnmA	2.8.1.13	-	J	ko:K00566	ko04122,map04122	ko00000,ko00001,ko01000,ko03016	Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
APKMJDPJ_04183	0.0	-	2.7.11.1	-	L	ko:K08282	-	ko00000,ko01000	SNF2 family N-terminal domain
APKMJDPJ_04184	8.38e-189	-	-	-	-	-	-	-	-
APKMJDPJ_04185	8.61e-278	-	-	-	-	ko:K07267	-	ko00000,ko02000	-
APKMJDPJ_04186	0.0	mgtA	3.6.3.2	-	P	ko:K01531	-	ko00000,ko01000	Psort location CytoplasmicMembrane, score
APKMJDPJ_04187	0.0	arlS_1	-	-	T	-	-	-	histidine kinase DNA gyrase B
APKMJDPJ_04188	3.84e-162	-	-	-	K	ko:K07665	ko02020,map02020	ko00000,ko00001,ko00002,ko01504,ko02022	COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
APKMJDPJ_04189	0.0	-	-	-	P	-	-	-	Kelch motif
APKMJDPJ_04191	1.29e-315	-	-	-	T	-	-	-	His Kinase A (phosphoacceptor) domain
APKMJDPJ_04192	1.1e-155	-	-	-	KT	-	-	-	Transcriptional regulatory protein, C terminal
APKMJDPJ_04193	2.82e-198	-	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
APKMJDPJ_04194	0.0	cysS	6.1.1.16	-	J	ko:K01883	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-I aminoacyl-tRNA synthetase family
APKMJDPJ_04195	8.87e-88	paaI	-	-	Q	ko:K02614	ko00360,map00360	ko00000,ko00001,ko01000	phenylacetic acid degradation protein
APKMJDPJ_04196	3.26e-170	-	-	-	NU	-	-	-	Protein of unknown function (DUF3108)
APKMJDPJ_04197	0.0	-	-	-	S	-	-	-	COG NOG07965 non supervised orthologous group
APKMJDPJ_04198	0.0	lacZ	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	COG3250 Beta-galactosidase beta-glucuronidase
APKMJDPJ_04199	7.65e-254	mtrC	-	-	M	ko:K03585	ko01501,ko01503,map01501,map01503	ko00000,ko00001,ko00002,ko01504,ko02000,ko03036	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
APKMJDPJ_04200	0.0	mexF	-	-	V	ko:K03296	-	ko00000	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
APKMJDPJ_04201	3.42e-313	-	-	-	MU	-	-	-	Efflux transporter, outer membrane factor lipoprotein, NodT family
APKMJDPJ_04202	2.07e-164	lpxA2	2.3.1.129	-	M	ko:K00677	ko00540,ko01100,ko01503,map00540,map01100,map01503	ko00000,ko00001,ko00002,ko01000,ko01005	Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
APKMJDPJ_04203	9.91e-162	-	-	-	T	-	-	-	Carbohydrate-binding family 9
APKMJDPJ_04204	4.34e-303	-	-	-	-	-	-	-	-
APKMJDPJ_04205	7.18e-233	dus	-	-	H	-	-	-	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
APKMJDPJ_04206	2.38e-133	-	-	-	S	-	-	-	COG NOG28211 non supervised orthologous group
APKMJDPJ_04207	0.0	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_04208	8.36e-173	dapB	1.17.1.8	-	E	ko:K00215	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the DapB family
APKMJDPJ_04209	0.0	lepB	3.4.21.89	-	U	ko:K03100	ko02024,ko03060,map02024,map03060	ko00000,ko00001,ko01000,ko01002	signal peptidase i
APKMJDPJ_04210	1.15e-234	lepB_1	3.4.21.89	-	U	ko:K03100	ko02024,ko03060,map02024,map03060	ko00000,ko00001,ko01000,ko01002	Belongs to the peptidase S26 family
APKMJDPJ_04211	1.46e-159	-	-	-	C	-	-	-	WbqC-like protein
APKMJDPJ_04212	1.18e-186	uxuB	-	-	IQ	-	-	-	Oxidoreductase, short chain dehydrogenase reductase family protein
APKMJDPJ_04213	1.29e-296	uxuA	4.2.1.8	-	H	ko:K01686	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the dehydration of D-mannonate
APKMJDPJ_04214	5.25e-125	-	-	-	K	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_04216	3.56e-293	-	-	-	S	-	-	-	Belongs to the peptidase M16 family
APKMJDPJ_04217	2.23e-124	-	3.2.2.10	-	S	ko:K06966	ko00230,ko00240,map00230,map00240	ko00000,ko00001,ko01000	Belongs to the LOG family
APKMJDPJ_04218	4.9e-138	kdsD	5.3.1.13	-	M	ko:K06041	ko00540,ko01100,map00540,map01100	ko00000,ko00001,ko00002,ko01000,ko01005	sugar phosphate isomerase involved in capsule formation
APKMJDPJ_04219	1.33e-226	-	2.7.1.4	-	G	ko:K00847	ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100	ko00000,ko00001,ko01000	COG COG0524 Sugar kinases, ribokinase family
APKMJDPJ_04220	4.31e-257	-	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Psort location Cytoplasmic, score 8.96
APKMJDPJ_04221	0.0	-	3.6.4.13	-	L	ko:K05592	ko03018,map03018	ko00000,ko00001,ko01000,ko03009,ko03019	Belongs to the DEAD box helicase family
APKMJDPJ_04222	1.43e-191	-	-	-	EG	-	-	-	EamA-like transporter family
APKMJDPJ_04223	0.0	dpp7	-	-	E	-	-	-	COG NOG04781 non supervised orthologous group
APKMJDPJ_04224	2.91e-310	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
APKMJDPJ_04225	0.0	cap	-	-	S	-	-	-	COG2244 Membrane protein involved in the export of O-antigen and teichoic acid
APKMJDPJ_04226	1.12e-243	ruvB	3.6.4.12	-	L	ko:K03551	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
APKMJDPJ_04227	2.31e-165	-	-	-	L	-	-	-	DNA alkylation repair enzyme
APKMJDPJ_04228	5.28e-281	spmA	-	-	S	ko:K06373	-	ko00000	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_04230	9.65e-193	-	-	-	-	-	-	-	-
APKMJDPJ_04231	1.9e-99	-	-	-	-	-	-	-	-
APKMJDPJ_04232	1.34e-98	ybeY	-	-	S	-	-	-	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
APKMJDPJ_04234	4.18e-242	-	-	-	S	-	-	-	Peptidase C10 family
APKMJDPJ_04236	0.0	-	-	-	NU	-	-	-	Type IV pilus biogenesis stability protein PilW
APKMJDPJ_04238	0.0	gidA	-	-	D	ko:K03495	-	ko00000,ko03016,ko03036	NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
APKMJDPJ_04239	4.31e-123	apt	2.4.2.7	-	F	ko:K00759	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000,ko04147	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
APKMJDPJ_04240	0.0	uvrC	-	-	L	ko:K03703	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
APKMJDPJ_04241	7.27e-106	dtd	-	-	J	ko:K07560	-	ko00000,ko01000,ko03016	rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
APKMJDPJ_04242	5.37e-74	ypjD	-	-	S	-	-	-	MazG nucleotide pyrophosphohydrolase domain
APKMJDPJ_04243	1.59e-210	deoC	4.1.2.4	-	H	ko:K01619	ko00030,map00030	ko00000,ko00001,ko01000	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
APKMJDPJ_04244	9.05e-169	-	-	-	S	-	-	-	Protein of unknown function (DUF1266)
APKMJDPJ_04245	7.49e-191	ispB	2.5.1.90	-	H	ko:K02523	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	Belongs to the FPP GGPP synthase family
APKMJDPJ_04246	0.0	polA	2.7.7.7	-	L	ko:K02335	ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440	ko00000,ko00001,ko01000,ko03032,ko03400	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
APKMJDPJ_04247	3.65e-90	-	-	-	S	-	-	-	COG NOG29882 non supervised orthologous group
APKMJDPJ_04248	3.14e-177	-	-	-	T	ko:K02477	-	ko00000,ko02022	COG3279 Response regulator of the LytR AlgR family
APKMJDPJ_04249	0.0	-	-	-	T	-	-	-	Histidine kinase
APKMJDPJ_04250	1.13e-219	cysE	2.3.1.30	-	E	ko:K00640	ko00270,ko00920,ko01100,ko01110,ko01120,ko01200,ko01230,ko05111,map00270,map00920,map01100,map01110,map01120,map01200,map01230,map05111	ko00000,ko00001,ko00002,ko01000	Psort location Cytoplasmic, score 9.97
APKMJDPJ_04251	6.26e-308	rlmL	-	-	L	ko:K07444	-	ko00000,ko01000	Belongs to the methyltransferase superfamily
APKMJDPJ_04252	0.0	pepX2	3.4.14.5	-	E	ko:K01278	ko04974,map04974	ko00000,ko00001,ko01000,ko01002,ko04090,ko04147	Peptidase, S9A B C family, catalytic domain protein
APKMJDPJ_04253	3.5e-309	purD	6.3.4.13	-	F	ko:K01945	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the GARS family
APKMJDPJ_04254	1.51e-235	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_04255	1.33e-105	yqaA	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 9.46
APKMJDPJ_04256	1.7e-189	mnmC	-	-	S	-	-	-	Psort location Cytoplasmic, score
APKMJDPJ_04258	1.51e-233	metF	1.5.1.20	-	C	ko:K00297	ko00670,ko00720,ko01100,ko01120,ko01200,ko01523,map00670,map00720,map01100,map01120,map01200,map01523	ko00000,ko00001,ko00002,ko01000	Psort location Cytoplasmic, score
APKMJDPJ_04259	4.57e-268	holB	2.7.7.7	-	L	ko:K02341	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	COG2812 DNA polymerase III gamma tau subunits
APKMJDPJ_04260	4.71e-294	yaaT	-	-	S	-	-	-	PSP1 C-terminal domain protein
APKMJDPJ_04261	2.26e-107	gldH	-	-	S	-	-	-	Gliding motility-associated lipoprotein GldH
APKMJDPJ_04262	0.0	rodA	-	-	D	ko:K05837	-	ko00000,ko03036	Belongs to the SEDS family
APKMJDPJ_04263	0.0	mrdA	3.4.16.4	-	M	ko:K05515	ko00550,ko01501,map00550,map01501	ko00000,ko00001,ko01000,ko01011	penicillin-binding protein 2
APKMJDPJ_04264	9.56e-107	mreD	-	-	S	-	-	-	rod shape-determining protein MreD
APKMJDPJ_04265	9.39e-194	mreC	-	-	M	ko:K03570	-	ko00000,ko03036	Involved in formation and maintenance of cell shape
APKMJDPJ_04266	7.54e-241	mreB	-	-	D	ko:K03569	-	ko00000,ko02048,ko03036,ko04812	Cell shape determining protein, MreB Mrl family
APKMJDPJ_04267	0.0	purH	2.1.2.3, 3.5.4.10	-	F	ko:K00602	ko00230,ko00670,ko01100,ko01110,ko01130,ko01523,map00230,map00670,map01100,map01110,map01130,map01523	ko00000,ko00001,ko00002,ko01000,ko04147	bifunctional purine biosynthesis protein PurH
APKMJDPJ_04268	0.0	pepO	-	-	O	ko:K07386	-	ko00000,ko01000,ko01002	Peptidase family M13
APKMJDPJ_04269	0.0	-	-	-	S	ko:K06158	-	ko00000,ko03012	ABC transporter, ATP-binding protein
APKMJDPJ_04270	2.24e-237	-	-	-	P	-	-	-	transport
APKMJDPJ_04272	1.27e-221	-	-	-	M	-	-	-	Nucleotidyltransferase
APKMJDPJ_04273	0.0	-	-	-	M	-	-	-	Outer membrane protein, OMP85 family
APKMJDPJ_04274	0.0	-	-	-	S	-	-	-	Psort location OuterMembrane, score 9.49
APKMJDPJ_04275	0.0	-	-	-	T	-	-	-	ATPase histidine kinase DNA gyrase B HSP90 domain protein
APKMJDPJ_04276	5.88e-312	norM	-	-	V	ko:K03327	-	ko00000,ko02000	MATE efflux family protein
APKMJDPJ_04277	2.1e-308	-	-	-	S	ko:K07263	-	ko00000,ko01000,ko01002	Peptidase M16 inactive domain protein
APKMJDPJ_04278	4.71e-202	-	5.2.1.8	-	M	ko:K01802,ko:K03768	-	ko00000,ko01000,ko03110	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
APKMJDPJ_04279	1.86e-316	-	-	-	T	ko:K07713	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains
APKMJDPJ_04281	1.11e-162	rluC	5.4.99.23, 5.4.99.28, 5.4.99.29	-	J	ko:K06177,ko:K06180	-	ko00000,ko01000,ko03009,ko03016	ribosomal pseudouridine synthase C, large subunit
APKMJDPJ_04282	6.05e-169	fabG	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	with different specificities (related to short-chain alcohol
APKMJDPJ_04283	1.52e-135	qacR	-	-	K	-	-	-	transcriptional regulator, TetR family
APKMJDPJ_04285	0.0	-	-	-	-	-	-	-	-
APKMJDPJ_04286	3.67e-179	-	-	-	S	ko:K20461	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC-2 family transporter protein
APKMJDPJ_04287	1.22e-219	bcrA	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC-type multidrug transport system ATPase component
APKMJDPJ_04288	0.0	-	-	-	S	-	-	-	Erythromycin esterase
APKMJDPJ_04289	8.04e-187	-	-	-	-	-	-	-	-
APKMJDPJ_04290	9.25e-82	-	-	-	K	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_04291	4.85e-191	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_04292	1.91e-200	cbiO	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	Psort location CytoplasmicMembrane, score
APKMJDPJ_04293	0.0	-	-	-	S	-	-	-	tetratricopeptide repeat
APKMJDPJ_04294	5.41e-226	-	-	-	P	ko:K02040	ko02010,ko02020,ko05152,map02010,map02020,map05152	ko00000,ko00001,ko00002,ko02000	COG0226 ABC-type phosphate transport system, periplasmic component
APKMJDPJ_04295	1.82e-186	tonB2	-	-	U	ko:K03832	-	ko00000,ko02000	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
APKMJDPJ_04296	2.22e-146	exbD2	-	-	U	-	-	-	Biopolymer transport protein ExbD/TolR
APKMJDPJ_04297	4.7e-136	exbD1	-	-	U	-	-	-	Biopolymer transport protein ExbD/TolR
APKMJDPJ_04298	1.8e-181	exbB	-	-	U	ko:K03561	-	ko00000,ko02000	MotA TolQ ExbB proton channel family
APKMJDPJ_04299	9.99e-98	-	-	-	-	-	-	-	-
APKMJDPJ_04300	0.0	-	-	-	S	-	-	-	Tetratricopeptide repeat protein
APKMJDPJ_04301	1.06e-255	-	-	-	CO	-	-	-	AhpC TSA family
APKMJDPJ_04302	0.0	comM	-	-	O	ko:K07391	-	ko00000	Magnesium chelatase, subunit ChlI
APKMJDPJ_04303	0.0	-	-	-	S	-	-	-	Tetratricopeptide repeat protein
APKMJDPJ_04304	1.56e-296	-	-	-	S	-	-	-	aa) fasta scores E()
APKMJDPJ_04305	0.0	-	-	-	O	-	-	-	COG NOG25094 non supervised orthologous group
APKMJDPJ_04306	0.0	-	-	-	T	-	-	-	ATPase histidine kinase DNA gyrase B HSP90 domain protein
APKMJDPJ_04307	1.74e-277	-	-	-	C	-	-	-	radical SAM domain protein
APKMJDPJ_04308	1.55e-115	-	-	-	-	-	-	-	-
APKMJDPJ_04309	0.0	-	-	-	C	ko:K09181	-	ko00000	CoA binding domain protein
APKMJDPJ_04310	0.0	-	-	-	E	-	-	-	non supervised orthologous group
APKMJDPJ_04312	4.13e-228	-	-	-	S	-	-	-	protein BT4048 SWALL AAO79153 (EMBL AE016943) (373 aa) fasta scores E()
APKMJDPJ_04314	3.75e-268	-	-	-	-	-	-	-	-
APKMJDPJ_04315	0.0	metG	6.1.1.10	-	J	ko:K01874	ko00450,ko00970,map00450,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
APKMJDPJ_04316	0.0	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_04317	3.26e-297	-	-	-	M	-	-	-	Glycosyltransferase, group 1 family protein
APKMJDPJ_04318	1.32e-248	-	-	-	M	-	-	-	hydrolase, TatD family'
APKMJDPJ_04319	4.28e-295	-	-	-	M	-	-	-	Glycosyl transferases group 1
APKMJDPJ_04320	1.51e-148	-	-	-	-	-	-	-	-
APKMJDPJ_04321	2.79e-277	epsC	5.1.3.14	-	G	ko:K01791	ko00520,ko01100,ko05111,map00520,map01100,map05111	ko00000,ko00001,ko00002,ko01000,ko01005	UDP-N-acetylglucosamine 2-epimerase
APKMJDPJ_04322	1.96e-296	-	1.1.1.336	-	M	ko:K02472	ko00520,ko05111,map00520,map05111	ko00000,ko00001,ko01000	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
APKMJDPJ_04323	0.0	-	-	-	M	-	-	-	Glycosyltransferase, group 1 family protein
APKMJDPJ_04324	2.33e-191	-	-	-	S	-	-	-	Glycosyltransferase, group 2 family protein
APKMJDPJ_04325	4.32e-172	cobB	-	-	K	ko:K12410	-	ko00000,ko01000	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
APKMJDPJ_04326	1.59e-135	fklB	5.2.1.8	-	G	ko:K03772,ko:K03773	-	ko00000,ko01000,ko03110	Peptidyl-prolyl cis-trans isomerase
APKMJDPJ_04327	5.07e-201	-	5.2.1.8	-	M	ko:K03772,ko:K03773	-	ko00000,ko01000,ko03110	Peptidyl-prolyl cis-trans isomerase
APKMJDPJ_04329	5.39e-111	asnC	-	-	K	ko:K03718	-	ko00000,ko03000	Transcriptional regulator, AsnC family
APKMJDPJ_04330	1.87e-72	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
APKMJDPJ_04332	3.56e-186	-	-	-	K	ko:K02477	-	ko00000,ko02022	LytTr DNA-binding domain protein
APKMJDPJ_04333	4.04e-241	-	-	-	T	-	-	-	Histidine kinase
APKMJDPJ_04334	1.93e-302	-	-	-	MU	-	-	-	Psort location OuterMembrane, score
APKMJDPJ_04335	0.0	-	-	-	V	-	-	-	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
APKMJDPJ_04336	4.06e-244	-	-	-	M	-	-	-	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
APKMJDPJ_04338	2.66e-137	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_04339	3.5e-40	rpmF	-	-	J	ko:K02911	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Belongs to the bacterial ribosomal protein bL32 family
APKMJDPJ_04340	3.93e-249	fabH	2.3.1.180	-	I	ko:K00648	ko00061,ko01100,ko01212,map00061,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
APKMJDPJ_04341	1.49e-208	era	-	-	S	ko:K03595	-	ko00000,ko03009,ko03029	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
APKMJDPJ_04342	1.57e-314	der	-	-	S	ko:K03977	-	ko00000,ko03009	GTPase that plays an essential role in the late steps of ribosome biogenesis
APKMJDPJ_04343	2.05e-146	-	-	-	K	-	-	-	COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
APKMJDPJ_04344	6.38e-184	metN	-	-	Q	ko:K02065	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter, ATP-binding protein
APKMJDPJ_04345	3.29e-165	mlaE	-	-	Q	ko:K02066	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_04346	4.28e-176	lptB	-	-	S	ko:K06861	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Psort location Cytoplasmic, score 9.12
APKMJDPJ_04347	2.07e-50	-	-	-	S	-	-	-	COG COG0724 RNA-binding proteins (RRM domain)
APKMJDPJ_04348	2.71e-313	tig	-	-	O	ko:K03545	-	ko00000	peptidyl-prolyl cis-trans isomerase (trigger factor)
APKMJDPJ_04349	1.45e-153	clpP	3.4.21.92	-	O	ko:K01358	ko04112,ko04212,map04112,map04212	ko00000,ko00001,ko01000,ko01002	Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
APKMJDPJ_04350	2.42e-300	clpX	-	-	O	ko:K03544	ko04112,map04112	ko00000,ko00001,ko03110	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
APKMJDPJ_04351	0.0	recQ	3.6.4.12	-	L	ko:K03654	ko03018,map03018	ko00000,ko00001,ko01000,ko03400	ATP-dependent DNA helicase RecQ
APKMJDPJ_04352	0.0	guaB	1.1.1.205	-	F	ko:K00088	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth
APKMJDPJ_04353	0.0	-	5.2.1.8	-	M	ko:K03771	-	ko00000,ko01000,ko03110	COG COG0760 Parvulin-like peptidyl-prolyl isomerase
APKMJDPJ_04354	2.69e-183	-	-	-	O	-	-	-	COG NOG23400 non supervised orthologous group
APKMJDPJ_04355	0.0	surA	5.2.1.8	-	M	ko:K03771	-	ko00000,ko01000,ko03110	peptidylprolyl isomerase
APKMJDPJ_04356	4.87e-308	lptD	-	-	M	-	-	-	COG NOG06415 non supervised orthologous group
APKMJDPJ_04357	3.33e-66	-	-	-	S	-	-	-	COG NOG23401 non supervised orthologous group
APKMJDPJ_04358	0.0	mutL	-	-	L	ko:K03572	ko03430,map03430	ko00000,ko00001,ko03400	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
APKMJDPJ_04360	3.13e-50	-	-	-	O	-	-	-	Ubiquitin homologues
APKMJDPJ_04362	6.46e-54	-	-	-	M	-	-	-	Belongs to the peptidase S41A family
APKMJDPJ_04363	1.19e-80	-	-	-	K	-	-	-	Helix-turn-helix domain
APKMJDPJ_04364	0.0	-	-	-	U	-	-	-	Psort location CytoplasmicMembrane, score 9.46
APKMJDPJ_04365	2.37e-46	-	-	-	-	-	-	-	-
APKMJDPJ_04366	4.67e-100	-	-	-	-	-	-	-	-
APKMJDPJ_04367	9.99e-57	-	-	-	-	-	-	-	-
APKMJDPJ_04368	1.78e-56	-	-	-	L	ko:K03530	-	ko00000,ko03032,ko03036,ko03400	Bacterial DNA-binding protein
APKMJDPJ_04369	9.06e-82	-	-	-	-	-	-	-	-
APKMJDPJ_04370	3.77e-212	-	-	-	L	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_04371	2.28e-157	-	-	-	-	-	-	-	-
APKMJDPJ_04372	6.98e-110	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_04373	7.06e-272	-	-	-	S	-	-	-	Protein of unknown function (DUF3991)
APKMJDPJ_04374	0.0	-	-	-	S	-	-	-	Protein of unknown function (DUF3945)
APKMJDPJ_04375	4.82e-166	-	-	-	S	-	-	-	Protein of unknown function (DUF4099)
APKMJDPJ_04376	2.51e-159	-	-	-	M	-	-	-	Peptidase family M23
APKMJDPJ_04377	8.55e-189	-	-	-	S	-	-	-	Zeta toxin
APKMJDPJ_04378	4.22e-50	-	-	-	-	-	-	-	-
APKMJDPJ_04379	6.59e-111	-	-	-	S	-	-	-	Protein of unknown function (DUF3990)
APKMJDPJ_04380	3.6e-101	-	-	-	S	-	-	-	Protein of unknown function (DUF3791)
APKMJDPJ_04381	4.28e-19	-	-	-	-	-	-	-	-
APKMJDPJ_04382	6.6e-142	-	-	-	M	-	-	-	Belongs to the ompA family
APKMJDPJ_04383	4.48e-152	-	-	-	-	-	-	-	-
APKMJDPJ_04384	1.86e-123	-	-	-	-	-	-	-	-
APKMJDPJ_04385	2.93e-196	-	-	-	S	-	-	-	Conjugative transposon TraN protein
APKMJDPJ_04386	1.41e-246	-	-	-	S	-	-	-	Conjugative transposon, TraM
APKMJDPJ_04387	1.61e-92	-	-	-	-	-	-	-	-
APKMJDPJ_04388	3.31e-142	-	-	-	U	-	-	-	Conjugative transposon TraK protein
APKMJDPJ_04389	7.6e-225	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 10.00
APKMJDPJ_04390	5.05e-153	-	-	-	-	-	-	-	-
APKMJDPJ_04391	1.5e-148	-	-	-	-	-	-	-	-
APKMJDPJ_04392	0.0	traG	-	-	U	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_04393	4.03e-63	-	-	-	-	-	-	-	-
APKMJDPJ_04394	8.91e-67	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
APKMJDPJ_04395	2.55e-68	-	-	-	-	-	-	-	-
APKMJDPJ_04396	2.8e-277	-	-	-	L	-	-	-	Initiator Replication protein
APKMJDPJ_04398	8.53e-45	-	-	-	-	-	-	-	-
APKMJDPJ_04399	1.02e-106	-	-	-	-	-	-	-	-
APKMJDPJ_04404	1.81e-41	-	-	-	-	-	-	-	-
APKMJDPJ_04405	5.02e-52	-	-	-	-	-	-	-	-
APKMJDPJ_04406	2.69e-55	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_04407	0.0	-	-	-	U	-	-	-	Relaxase/Mobilisation nuclease domain
APKMJDPJ_04408	2.15e-144	-	-	-	D	ko:K03496	-	ko00000,ko03036,ko04812	VirC1 protein
APKMJDPJ_04409	5.18e-94	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
APKMJDPJ_04410	5.75e-135	-	-	-	L	-	-	-	Resolvase, N-terminal domain protein
APKMJDPJ_04411	1.72e-244	-	-	-	L	-	-	-	DNA primase TraC
APKMJDPJ_04412	1.37e-45	-	-	-	-	-	-	-	-
APKMJDPJ_04413	1.35e-63	-	-	-	-	-	-	-	-