ORF_ID e_value Gene_name EC_number CAZy COGs KEGG_ko KEGG_Pathway BRITE Description
IJBIPKIF_00001 6.25e-304 mepA - - V ko:K18908 - ko00000,ko00002,ko01504,ko02000 MATE efflux family protein
IJBIPKIF_00002 2.45e-214 - 3.5.3.1 - E ko:K01476 ko00220,ko00330,ko01100,ko01110,ko01130,ko01230,ko05146,map00220,map00330,map01100,map01110,map01130,map01230,map05146 ko00000,ko00001,ko00002,ko01000 Arginase family
IJBIPKIF_00003 1.09e-135 - - - S - - - Membrane
IJBIPKIF_00004 0.0 bglH 3.2.1.86 GT1 G ko:K01223 ko00010,ko00500,map00010,map00500 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 1 family
IJBIPKIF_00005 0.0 - - - G ko:K02755,ko:K02757 ko02060,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 phosphotransferase system
IJBIPKIF_00006 2.24e-41 - 2.7.1.208, 2.7.1.211 - G ko:K02749,ko:K02750,ko:K02755,ko:K02756,ko:K02757,ko:K02808,ko:K02809,ko:K02810 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
IJBIPKIF_00007 2.69e-191 - - - K - - - Helix-turn-helix domain, rpiR family
IJBIPKIF_00008 0.0 - - - - - - - -
IJBIPKIF_00009 0.0 murC 6.3.2.8 - M ko:K01924 ko00471,ko00550,ko01100,map00471,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Belongs to the MurCDEF family
IJBIPKIF_00010 3.06e-157 XK27_10290 - - J ko:K06878 - ko00000 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
IJBIPKIF_00011 5.52e-71 ytpP - - CO - - - Thioredoxin
IJBIPKIF_00012 9.15e-165 trmB 2.1.1.33 - J ko:K03439 - ko00000,ko01000,ko03016 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
IJBIPKIF_00013 3.37e-273 ecsB - - U ko:K01992 - ko00000,ko00002,ko02000 ABC transporter
IJBIPKIF_00014 3.15e-175 ecsA - - V ko:K01990 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
IJBIPKIF_00015 1.38e-102 hit - - FG ko:K02503 - ko00000,ko04147 Scavenger mRNA decapping enzyme C-term binding
IJBIPKIF_00016 3.51e-74 - - - - - - - -
IJBIPKIF_00017 3.26e-199 prsA 5.2.1.8 - M ko:K07533 - ko00000,ko01000,ko03110 Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
IJBIPKIF_00018 3.19e-239 yhaM - - S ko:K03698 - ko00000,ko01000,ko03019 Metal dependent phosphohydrolases with conserved 'HD' motif.
IJBIPKIF_00019 0.0 yhaN - - L - - - AAA domain
IJBIPKIF_00020 8.31e-295 yhaO - - L ko:K03547 - ko00000,ko03400 Ser Thr phosphatase family protein
IJBIPKIF_00021 6.93e-72 yheA - - S - - - Belongs to the UPF0342 family
IJBIPKIF_00022 0.0 pbp2A 2.4.1.129, 3.4.16.4 GT51 M ko:K12555 ko00550,ko01100,ko01501,map00550,map01100,map01501 ko00000,ko00001,ko01000,ko01003,ko01011 penicillin-binding protein
IJBIPKIF_00023 3.09e-208 rluA 5.4.99.23, 5.4.99.28, 5.4.99.29 - J ko:K06177,ko:K06180 - ko00000,ko01000,ko03009,ko03016 Responsible for synthesis of pseudouridine from uracil
IJBIPKIF_00024 1.34e-182 glpF - - U ko:K02440 - ko00000,ko02000 Belongs to the MIP aquaporin (TC 1.A.8) family
IJBIPKIF_00025 2.79e-154 - - - - - - - -
IJBIPKIF_00026 2.45e-246 - - - C - - - FMN-dependent dehydrogenase
IJBIPKIF_00027 1.48e-217 fba 4.1.2.13, 4.1.2.29 - G ko:K01624,ko:K03339 ko00010,ko00030,ko00051,ko00562,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00562,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Fructose-1,6-bisphosphate aldolase, class II
IJBIPKIF_00028 0.0 argS 6.1.1.19 - J ko:K01887 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Arginyl-tRNA synthetase
IJBIPKIF_00029 1.06e-164 - - - M - - - ErfK YbiS YcfS YnhG
IJBIPKIF_00030 3.16e-197 nnrD 4.2.1.136, 5.1.99.6 - H ko:K17758,ko:K17759 - ko00000,ko01000 Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
IJBIPKIF_00031 3.95e-310 dacA 3.4.16.4 - M ko:K07258 ko00550,ko01100,map00550,map01100 ko00000,ko00001,ko01000,ko01002,ko01011 Belongs to the peptidase S11 family
IJBIPKIF_00033 1.19e-71 pspC - - KT ko:K03973 - ko00000,ko02048,ko03000 PspC domain
IJBIPKIF_00034 4.1e-251 flp - - V - - - Beta-lactamase
IJBIPKIF_00035 3.16e-72 - - - - - - - -
IJBIPKIF_00036 0.0 psd 4.1.1.65 - I ko:K01613 ko00564,ko01100,ko01110,map00564,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Belongs to the phosphatidylserine decarboxylase family
IJBIPKIF_00037 4.95e-53 - - - S - - - Enterocin A Immunity
IJBIPKIF_00038 0.0 - - - S - - - domain, Protein
IJBIPKIF_00039 6.41e-105 - - - S - - - Cupin domain
IJBIPKIF_00040 0.0 - - - D - - - Domain of Unknown Function (DUF1542)
IJBIPKIF_00041 1.39e-22 - - - K - - - transcriptional regulator
IJBIPKIF_00042 3.3e-94 - - - K - - - transcriptional regulator
IJBIPKIF_00044 0.0 ytgP - - S ko:K03328 - ko00000 Polysaccharide biosynthesis protein
IJBIPKIF_00045 0.0 leuS 6.1.1.4 - J ko:K01869 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Belongs to the class-I aminoacyl-tRNA synthetase family
IJBIPKIF_00046 7.75e-153 yodM 3.6.1.27 - I ko:K19302 ko00550,map00550 ko00000,ko00001,ko01000,ko01011 Acid phosphatase homologues
IJBIPKIF_00047 7.6e-118 yumB 1.6.99.3 - C ko:K03885 ko00190,map00190 ko00000,ko00001,ko01000 NADH dehydrogenase
IJBIPKIF_00048 1.29e-150 yumB 1.6.99.3 - C ko:K03885 ko00190,map00190 ko00000,ko00001,ko01000 NADH dehydrogenase
IJBIPKIF_00049 1.37e-36 cydA 1.10.3.14 - C ko:K00425 ko00190,ko01100,ko02020,map00190,map01100,map02020 ko00000,ko00001,ko00002,ko01000 ubiquinol oxidase
IJBIPKIF_00050 0.0 mdr - - EGP - - - Major Facilitator
IJBIPKIF_00051 5.35e-289 metK 2.5.1.6 - H ko:K00789 ko00270,ko01100,ko01110,ko01230,map00270,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
IJBIPKIF_00056 2.2e-68 yaaK - - S ko:K09747 - ko00000 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
IJBIPKIF_00057 4.56e-142 recR - - L ko:K06187 ko03440,map03440 ko00000,ko00001,ko03400 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
IJBIPKIF_00058 1.18e-46 - - - S - - - Protein of unknown function (DUF2508)
IJBIPKIF_00059 1.69e-150 tmk 2.7.4.9 - F ko:K00943 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
IJBIPKIF_00060 1.85e-69 yaaQ - - S - - - Cyclic-di-AMP receptor
IJBIPKIF_00061 5.91e-199 holB 2.7.7.7 - L ko:K02341 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase III
IJBIPKIF_00062 2.65e-80 yabA - - L - - - Involved in initiation control of chromosome replication
IJBIPKIF_00063 9.46e-200 rsmI 2.1.1.198 - H ko:K07056 - ko00000,ko01000,ko03009 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
IJBIPKIF_00064 1.29e-182 fat 3.1.2.21 - I ko:K01071 ko00061,ko01100,map00061,map01100 ko00000,ko00001,ko01000,ko01004 Acyl-ACP thioesterase
IJBIPKIF_00065 6.76e-114 - - - S - - - ECF transporter, substrate-specific component
IJBIPKIF_00066 8.02e-172 yeaZ 2.3.1.234 - O ko:K01409,ko:K14742 - ko00000,ko01000,ko03016 Universal bacterial protein YeaZ
IJBIPKIF_00067 1.49e-138 rimI 2.3.1.128 - K ko:K03789 - ko00000,ko01000,ko03009 Ribosomal-protein-alanine acetyltransferase
IJBIPKIF_00068 5.62e-252 tsaD 2.3.1.234 - J ko:K01409 - ko00000,ko01000,ko03016 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
IJBIPKIF_00069 9.05e-170 deoC 4.1.2.4 - F ko:K01619 ko00030,map00030 ko00000,ko00001,ko01000 Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
IJBIPKIF_00070 7.2e-235 - - - S - - - Oxidoreductase family, NAD-binding Rossmann fold
IJBIPKIF_00071 4.46e-165 frlR1 - - K ko:K03710,ko:K10711 - ko00000,ko03000 UTRA
IJBIPKIF_00072 1.38e-298 bbsF_1 2.8.3.19 - C ko:K18702 - ko00000,ko01000 Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
IJBIPKIF_00073 0.0 frc 2.8.3.16 - C ko:K07749 - ko00000,ko01000 Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
IJBIPKIF_00074 0.0 spxB 1.2.3.3, 1.2.5.1, 2.2.1.6, 4.1.1.8 - EH ko:K00156,ko:K00158,ko:K01577,ko:K01652 ko00290,ko00620,ko00630,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00620,map00630,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the TPP enzyme family
IJBIPKIF_00075 0.0 ydiF - - S ko:K06158 - ko00000,ko03012 ABC transporter, ATP-binding protein
IJBIPKIF_00076 1.24e-145 rex - - K ko:K01926 - ko00000,ko03000 Modulates transcription in response to changes in cellular NADH NAD( ) redox state
IJBIPKIF_00077 6.41e-236 scrR - - K ko:K03484 - ko00000,ko03000 helix_turn _helix lactose operon repressor
IJBIPKIF_00078 0.0 scrB 3.2.1.26 GH32 G ko:K01193 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 invertase
IJBIPKIF_00079 0.0 scrA 2.7.1.211 - G ko:K02808,ko:K02809,ko:K02810 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 phosphotransferase system
IJBIPKIF_00080 4.92e-107 - - - - - - - -
IJBIPKIF_00081 1.33e-100 - - - K - - - LytTr DNA-binding domain
IJBIPKIF_00082 2.29e-175 - - - S - - - membrane
IJBIPKIF_00083 2.22e-60 groS - - O ko:K04078 - ko00000,ko03029,ko03110 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
IJBIPKIF_00084 0.0 groL - - O ko:K04077 ko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152 ko00000,ko00001,ko03019,ko03029,ko03110,ko04147 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
IJBIPKIF_00085 0.0 mutS - - L ko:K03555 ko03430,map03430 ko00000,ko00001,ko03400 that it carries out the mismatch recognition step. This protein has a weak ATPase activity
IJBIPKIF_00086 0.0 mutL - - L ko:K03572 ko03430,map03430 ko00000,ko00001,ko03400 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
IJBIPKIF_00087 2.35e-133 ruvA 3.6.4.12 - L ko:K03550 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
IJBIPKIF_00088 1.61e-239 ruvB 3.6.4.12 - L ko:K03551 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
IJBIPKIF_00089 2.41e-83 yajC - - U ko:K03210 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Preprotein translocase
IJBIPKIF_00090 0.0 zwf 1.1.1.363, 1.1.1.49 - G ko:K00036 ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,ko05230,map00030,map00480,map01100,map01110,map01120,map01130,map01200,map05230 ko00000,ko00001,ko00002,ko01000,ko04147 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
IJBIPKIF_00091 1.32e-255 dinB 2.7.7.7 - L ko:K02346 - ko00000,ko01000,ko03400 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
IJBIPKIF_00092 9.43e-233 nrnA 3.1.13.3, 3.1.3.7 - S ko:K06881 ko00920,ko01100,ko01120,map00920,map01100,map01120 ko00000,ko00001,ko01000,ko03400 DHHA1 domain protein
IJBIPKIF_00093 8.26e-316 cshB 3.6.4.13 - JKL ko:K05592,ko:K18692 ko03018,map03018 ko00000,ko00001,ko01000,ko03009,ko03019 DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
IJBIPKIF_00094 0.0 alaS 6.1.1.7 - J ko:K01872 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
IJBIPKIF_00095 5.32e-57 yrzL - - S - - - Belongs to the UPF0297 family
IJBIPKIF_00096 3.27e-96 yrrK - - J ko:K07447 - ko00000,ko01000 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
IJBIPKIF_00097 2.03e-67 yrzB - - S - - - Belongs to the UPF0473 family
IJBIPKIF_00098 0.0 mutS2 - - L ko:K07456 ko03430,map03430 ko00000,ko00001,ko03400 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
IJBIPKIF_00099 1.54e-71 trxA - - O ko:K03671 ko04621,ko05418,map04621,map05418 ko00000,ko00001,ko03110 Belongs to the thioredoxin family
IJBIPKIF_00100 1.46e-70 mscL - - M ko:K03282 - ko00000,ko02000 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
IJBIPKIF_00101 2.57e-91 yslB - - S - - - Protein of unknown function (DUF2507)
IJBIPKIF_00102 1.33e-186 murI 3.6.1.66, 5.1.1.3 - M ko:K01776,ko:K02428 ko00230,ko00471,ko01100,map00230,map00471,map01100 ko00000,ko00001,ko01000,ko01011 Provides the (R)-glutamate required for cell wall biosynthesis
IJBIPKIF_00103 1.42e-143 rdgB 3.6.1.66 - F ko:K02428 ko00230,map00230 ko00000,ko00001,ko01000 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
IJBIPKIF_00104 3.18e-165 ykuT - - M ko:K16052,ko:K22044 - ko00000,ko02000 mechanosensitive ion channel
IJBIPKIF_00105 2.09e-23 ytxG - - S - - - protein containing a divergent version of the methyl-accepting chemotaxis-like domain
IJBIPKIF_00106 1.37e-74 - - - - - - - -
IJBIPKIF_00107 4.1e-275 pepQ 3.4.13.9 - E ko:K01271 - ko00000,ko01000,ko01002 Creatinase/Prolidase N-terminal domain
IJBIPKIF_00108 4.5e-234 ccpA - - K ko:K02529 - ko00000,ko03000 catabolite control protein A
IJBIPKIF_00109 0.0 - 3.1.4.46 - C ko:K01126 ko00564,map00564 ko00000,ko00001,ko01000 glycerophosphoryl diester phosphodiesterase
IJBIPKIF_00110 2.5e-74 - - - - - - - -
IJBIPKIF_00111 0.0 sasH 3.1.3.5, 3.1.3.6, 3.1.4.16, 3.6.1.45 - F ko:K01081,ko:K01119,ko:K07004,ko:K08693,ko:K11751 ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110 ko00000,ko00001,ko01000 Belongs to the 5'-nucleotidase family
IJBIPKIF_00112 6.99e-134 yutD - - S - - - Protein of unknown function (DUF1027)
IJBIPKIF_00113 1.9e-186 nagD 3.1.3.41 - G ko:K01101 ko00627,ko01120,map00627,map01120 ko00000,ko00001,ko01000 Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
IJBIPKIF_00114 3.19e-139 - - - S - - - Protein of unknown function (DUF1461)
IJBIPKIF_00115 1.45e-151 dedA - - S ko:K03975 - ko00000 SNARE-like domain protein
IJBIPKIF_00116 4.65e-193 yumC 1.18.1.2, 1.19.1.1 - C ko:K21567 - ko00000,ko01000 Ferredoxin--NADP reductase
IJBIPKIF_00117 3.53e-294 pbuG - - S ko:K06901 - ko00000,ko02000 permease
IJBIPKIF_00118 3.03e-187 - - - S - - - haloacid dehalogenase-like hydrolase
IJBIPKIF_00119 6.91e-165 dgk2 2.7.1.76 - F ko:K10353 ko00230,ko01100,map00230,map01100 ko00000,ko00001,ko01000 deoxynucleoside kinase
IJBIPKIF_00120 1.63e-152 dak 2.7.1.76 - F ko:K10353 ko00230,ko01100,map00230,map01100 ko00000,ko00001,ko01000 deoxynucleoside kinase
IJBIPKIF_00121 1.19e-175 nagB 3.5.99.6 - G ko:K02564 ko00520,ko01100,map00520,map01100 ko00000,ko00001,ko01000 Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
IJBIPKIF_00122 1.25e-204 - - - S - - - Aldo/keto reductase family
IJBIPKIF_00123 4.74e-217 yufQ - - S ko:K02057 - ko00000,ko00002,ko02000 Belongs to the binding-protein-dependent transport system permease family
IJBIPKIF_00124 9.19e-266 mglC - - S ko:K02057 - ko00000,ko00002,ko02000 Belongs to the binding-protein-dependent transport system permease family
IJBIPKIF_00125 0.0 mglA 3.6.3.17 - S ko:K02056,ko:K06400 - ko00000,ko00002,ko01000,ko02000 ABC transporter
IJBIPKIF_00126 9.41e-257 tcsA - - S ko:K02058,ko:K07335 - ko00000,ko00002,ko02000 ABC transporter substrate-binding protein PnrA-like
IJBIPKIF_00127 1.21e-236 tcsA - - S ko:K02058,ko:K07335 - ko00000,ko00002,ko02000 ABC transporter substrate-binding protein PnrA-like
IJBIPKIF_00128 4.51e-134 - - - S - - - ECF transporter, substrate-specific component
IJBIPKIF_00129 0.0 - - - V ko:K02003,ko:K02004 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
IJBIPKIF_00130 3.39e-253 - - - S - - - DUF218 domain
IJBIPKIF_00131 2.41e-155 - - - S ko:K07052 - ko00000 CAAX protease self-immunity
IJBIPKIF_00132 1.4e-88 - - - K - - - Helix-turn-helix XRE-family like proteins
IJBIPKIF_00133 5.7e-125 - - - M - - - CHAP domain
IJBIPKIF_00134 1.57e-197 mutR - - K - - - Helix-turn-helix XRE-family like proteins
IJBIPKIF_00135 0.0 - - - V ko:K06148 - ko00000,ko02000 ABC transporter transmembrane region
IJBIPKIF_00136 2.82e-105 - - - S - - - Putative adhesin
IJBIPKIF_00137 4.69e-262 napA - - P - - - Sodium/hydrogen exchanger family
IJBIPKIF_00138 0.0 cadA - - P - - - P-type ATPase
IJBIPKIF_00139 1.97e-107 ykuL - - S - - - (CBS) domain
IJBIPKIF_00140 8.03e-278 - - - S - - - Membrane
IJBIPKIF_00141 2.18e-53 - - - - - - - -
IJBIPKIF_00142 2.17e-25 - - - S - - - D-Ala-teichoic acid biosynthesis protein
IJBIPKIF_00143 0.0 dltA 6.1.1.13 - H ko:K03367 ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150 ko00000,ko00001,ko00002,ko01000,ko01504 Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
IJBIPKIF_00144 3.35e-310 dltB - - M ko:K03739 ko01503,ko02020,ko05150,map01503,map02020,map05150 ko00000,ko00001,ko00002,ko01504 MBOAT, membrane-bound O-acyltransferase family
IJBIPKIF_00145 2.46e-48 dltC 6.1.1.13 - J ko:K14188 ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150 ko00000,ko00001,ko00002,ko01000,ko01504 Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
IJBIPKIF_00146 6.8e-316 dltD - - M ko:K03740 ko01503,ko02020,ko05150,map01503,map02020,map05150 ko00000,ko00001,ko00002,ko01504 Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
IJBIPKIF_00147 3.4e-228 pbpX2 - - V - - - Beta-lactamase
IJBIPKIF_00148 2.86e-81 - - - - - - - -
IJBIPKIF_00149 9.09e-164 - - - S - - - Protein of unknown function (DUF975)
IJBIPKIF_00150 9.26e-222 lysA2 - - M ko:K07273 - ko00000 Glycosyl hydrolases family 25
IJBIPKIF_00151 0.0 ytgP - - S ko:K03328 - ko00000 Polysaccharide biosynthesis protein
IJBIPKIF_00152 5.63e-49 - - - - - - - -
IJBIPKIF_00153 0.0 ylbB - - V ko:K02004 - ko00000,ko00002,ko02000 ABC transporter permease
IJBIPKIF_00154 8.01e-162 - - - V ko:K02003 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
IJBIPKIF_00155 1e-305 pts13C - - G ko:K02761 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko02000 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
IJBIPKIF_00156 4.24e-217 - - - S - - - Alpha/beta hydrolase of unknown function (DUF915)
IJBIPKIF_00157 0.0 clpE - - O ko:K03697,ko:K04086 - ko00000,ko03110 AAA domain (Cdc48 subfamily)
IJBIPKIF_00158 1.07e-150 sipS3 3.4.21.89 - U ko:K03100 ko02024,ko03060,map02024,map03060 ko00000,ko00001,ko01000,ko01002 Belongs to the peptidase S26 family
IJBIPKIF_00159 3.76e-289 - - - S - - - SLAP domain
IJBIPKIF_00160 2.15e-21 - - - - - - - -
IJBIPKIF_00161 6.3e-91 - - - - - - - -
IJBIPKIF_00162 0.0 kup - - P ko:K03549 - ko00000,ko02000 Transport of potassium into the cell
IJBIPKIF_00163 0.0 pepO - - O ko:K07386 - ko00000,ko01000,ko01002 Peptidase family M13
IJBIPKIF_00164 1.88e-292 yttB - - EGP - - - Major Facilitator
IJBIPKIF_00165 4.3e-297 XK27_04775 - - S ko:K09155 - ko00000 PAS domain
IJBIPKIF_00166 1.6e-127 yitW - - S - - - Iron-sulfur cluster assembly protein
IJBIPKIF_00167 1.29e-178 nrdG 1.97.1.4 - O ko:K04068 - ko00000,ko01000 Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
IJBIPKIF_00168 0.0 nrdD 1.1.98.6 - F ko:K21636 ko00230,ko00240,ko01100,map00230,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Ribonucleoside-triphosphate reductase
IJBIPKIF_00169 0.0 yxbA 6.3.1.12 - S ko:K17810 - ko00000,ko01000 ATP-grasp enzyme
IJBIPKIF_00170 0.0 asnB 6.3.5.4 - E ko:K01953 ko00250,ko01100,ko01110,map00250,map01100,map01110 ko00000,ko00001,ko01000,ko01002 Asparagine synthase
IJBIPKIF_00171 0.0 - - - S - - - Calcineurin-like phosphoesterase
IJBIPKIF_00172 3.65e-109 - - - - - - - -
IJBIPKIF_00173 7.66e-141 tag 3.2.2.20 - L ko:K01246 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 glycosylase
IJBIPKIF_00174 6.38e-191 - - - P ko:K02042 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
IJBIPKIF_00175 2.84e-171 phnB - - P ko:K02042 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
IJBIPKIF_00176 4.46e-180 phnC 3.6.3.28 - P ko:K02041 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
IJBIPKIF_00177 7.56e-214 phnD - - P ko:K02044 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Phosphonate ABC transporter
IJBIPKIF_00178 3.95e-113 usp5 - - T - - - universal stress protein
IJBIPKIF_00179 8.74e-192 - 3.1.3.48 - T ko:K01104 - ko00000,ko01000 Tyrosine phosphatase family
IJBIPKIF_00180 1.74e-112 - 2.7.1.200, 2.7.1.204 - G ko:K02773,ko:K20112 ko00052,ko01100,ko02060,map00052,map01100,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
IJBIPKIF_00181 2.9e-116 ntd 2.4.2.6 - F ko:K08728 ko00240,map00240 ko00000,ko00001,ko01000 Nucleoside
IJBIPKIF_00182 8.53e-292 nagA 3.5.1.25 - G ko:K01443 ko00520,ko01130,map00520,map01130 ko00000,ko00001,ko01000 Belongs to the metallo-dependent hydrolases superfamily. NagA family
IJBIPKIF_00183 0.0 - - - G - - - Belongs to the glycosyl hydrolase 31 family
IJBIPKIF_00184 7.56e-205 - - - I - - - alpha/beta hydrolase fold
IJBIPKIF_00185 1.71e-170 yibF - - S - - - overlaps another CDS with the same product name
IJBIPKIF_00186 9.78e-258 yibE - - S - - - overlaps another CDS with the same product name
IJBIPKIF_00187 1.49e-136 - - - - - - - -
IJBIPKIF_00188 7.25e-265 ddl 6.3.2.4 - F ko:K01921 ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502 ko00000,ko00001,ko01000,ko01011 Belongs to the D-alanine--D-alanine ligase family
IJBIPKIF_00189 1.96e-293 - - - S - - - Cysteine-rich secretory protein family
IJBIPKIF_00190 7.42e-173 glnQ 3.6.3.21 - E ko:K02028 - ko00000,ko00002,ko01000,ko02000 ABC transporter, ATP-binding protein
IJBIPKIF_00191 0.0 glnPH2 - - P ko:K02029,ko:K02030 - ko00000,ko00002,ko02000 ABC transporter permease
IJBIPKIF_00192 2.93e-173 - - - - - - - -
IJBIPKIF_00193 3.45e-142 - - - K - - - Bacterial regulatory proteins, tetR family
IJBIPKIF_00194 1.51e-234 prs2 2.7.6.1 - F ko:K00948 ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
IJBIPKIF_00195 1.3e-99 - 3.6.4.12 - K ko:K03655 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Putative ATP-dependent DNA helicase recG C-terminal
IJBIPKIF_00196 2.83e-62 - - - - - - - -
IJBIPKIF_00199 9.77e-170 yycF - - K ko:K07668 ko02020,map02020 ko00000,ko00001,ko00002,ko02022 response regulator
IJBIPKIF_00200 0.0 vicK 2.7.13.3 - T ko:K07652 ko02020,map02020 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Histidine kinase
IJBIPKIF_00201 0.0 yycH - - S - - - YycH protein
IJBIPKIF_00202 2.91e-189 yycI - - S - - - YycH protein
IJBIPKIF_00203 9.1e-193 vicX 3.1.26.11 - S ko:K00784 ko03013,map03013 ko00000,ko00001,ko01000,ko03016 domain protein
IJBIPKIF_00204 2.7e-257 htrA 3.4.21.107 - O ko:K04771 ko01503,ko02020,map01503,map02020 ko00000,ko00001,ko00002,ko01000,ko01002,ko03110 serine protease
IJBIPKIF_00205 2.48e-106 rlmH 2.1.1.177 - J ko:K00783 - ko00000,ko01000,ko03009 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
IJBIPKIF_00206 1.51e-194 - - - K - - - Helix-turn-helix XRE-family like proteins
IJBIPKIF_00208 0.0 - - - S - - - CAAX protease self-immunity
IJBIPKIF_00209 1.98e-26 - - - - - - - -
IJBIPKIF_00210 1.09e-157 - - - - - - - -
IJBIPKIF_00211 8e-226 pepI 3.4.11.5 - E ko:K01259 ko00330,map00330 ko00000,ko00001,ko01000,ko01002 Releases the N-terminal proline from various substrates
IJBIPKIF_00212 6.92e-130 - - - P ko:K16785 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Cobalt transport protein
IJBIPKIF_00213 0.0 - - - S ko:K16786,ko:K16787 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ABC transporter, ATP-binding protein
IJBIPKIF_00214 2.11e-222 - - - K - - - helix_turn_helix, arabinose operon control protein
IJBIPKIF_00215 9.9e-209 htpX - - O ko:K03799 - ko00000,ko00002,ko01000,ko01002 Belongs to the peptidase M48B family
IJBIPKIF_00216 1.43e-125 lemA - - S ko:K03744 - ko00000 LemA family
IJBIPKIF_00217 3.36e-249 ysdE - - P - - - Citrate transporter
IJBIPKIF_00218 7.83e-91 - - - S - - - Iron-sulphur cluster biosynthesis
IJBIPKIF_00219 0.0 glpQ 3.1.4.46 - C ko:K01126 ko00564,map00564 ko00000,ko00001,ko01000 Membrane domain of glycerophosphoryl diester phosphodiesterase
IJBIPKIF_00220 9.69e-25 - - - - - - - -
IJBIPKIF_00221 2.14e-197 - - - - - - - -
IJBIPKIF_00223 1.08e-288 ydaM - - M - - - Glycosyl transferase family group 2
IJBIPKIF_00224 2.11e-271 - - - G - - - Glycosyl hydrolases family 8
IJBIPKIF_00225 1.07e-157 yfbR - - S ko:K07023 - ko00000 HD containing hydrolase-like enzyme
IJBIPKIF_00226 2.73e-206 - - - L - - - HNH nucleases
IJBIPKIF_00227 1.63e-233 yhaH - - S - - - Protein of unknown function (DUF805)
IJBIPKIF_00228 2.21e-177 glnQ - - E ko:K17076 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ABC transporter, ATP-binding protein
IJBIPKIF_00229 0.0 XK27_05795 - - P ko:K17073,ko:K17074 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter permease
IJBIPKIF_00230 3.08e-159 yxlJ 3.2.2.21 - L ko:K03652 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 Belongs to the DNA glycosylase MPG family
IJBIPKIF_00231 2.29e-85 yeaO - - S - - - Protein of unknown function, DUF488
IJBIPKIF_00232 9.33e-180 terC - - P - - - Integral membrane protein TerC family
IJBIPKIF_00233 2.57e-171 cobB - - K ko:K12410 - ko00000,ko01000 SIR2 family
IJBIPKIF_00234 9.36e-111 - - - - - - - -
IJBIPKIF_00235 0.0 cls - - I ko:K06131 ko00564,ko01100,map00564,map01100 ko00000,ko00001,ko01000 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
IJBIPKIF_00236 1.45e-231 - - - S - - - Alpha/beta hydrolase of unknown function (DUF915)
IJBIPKIF_00237 2.82e-183 rnhA 3.1.26.4 - L ko:K03469 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
IJBIPKIF_00238 5.06e-182 - - - S - - - Protein of unknown function (DUF1002)
IJBIPKIF_00239 2.63e-204 - - - M - - - Glycosyltransferase like family 2
IJBIPKIF_00240 1.07e-163 - - - S - - - Alpha/beta hydrolase family
IJBIPKIF_00241 1.02e-191 - - - K - - - Helix-turn-helix XRE-family like proteins
IJBIPKIF_00242 1.33e-75 - - - - - - - -
IJBIPKIF_00243 8.71e-157 - - - - - - - -
IJBIPKIF_00244 4.27e-293 aapA - - E ko:K03293,ko:K11737 - ko00000,ko02000 Amino acid permease
IJBIPKIF_00245 1.84e-314 yifK - - E ko:K03293 - ko00000 Amino acid permease
IJBIPKIF_00246 1.4e-180 puuD - - S ko:K07010 - ko00000,ko01002 peptidase C26
IJBIPKIF_00247 1e-305 - - - E - - - amino acid
IJBIPKIF_00248 1.27e-70 - - - CO ko:K03671 ko04621,ko05418,map04621,map05418 ko00000,ko00001,ko03110 Thioredoxin
IJBIPKIF_00249 1.75e-10 - - - - - - - -
IJBIPKIF_00250 6.09e-152 - - - K - - - Rhodanese Homology Domain
IJBIPKIF_00251 1.23e-224 trxB 1.8.1.9 - C ko:K00384 ko00450,map00450 ko00000,ko00001,ko01000 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
IJBIPKIF_00252 6.65e-153 frnE 5.3.4.1 - Q ko:K01829 - ko00000,ko01000 DSBA-like thioredoxin domain
IJBIPKIF_00253 4.6e-249 asnA 6.3.1.1 - F ko:K01914 ko00250,ko00460,ko01100,ko01110,ko01230,map00250,map00460,map01100,map01110,map01230 ko00000,ko00001,ko01000 aspartate--ammonia ligase
IJBIPKIF_00254 1.69e-259 - 4.2.1.126 - S ko:K07106,ko:K09963 ko00520,ko01100,map00520,map01100 ko00000,ko00001,ko01000 Bacterial protein of unknown function (DUF871)
IJBIPKIF_00257 2.84e-240 guaC 1.7.1.7 - F ko:K00364 ko00230,map00230 ko00000,ko00001,ko01000 Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
IJBIPKIF_00258 0.0 purA 6.3.4.4 - F ko:K01939 ko00230,ko00250,ko01100,map00230,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
IJBIPKIF_00259 1.14e-313 purB 4.3.2.2 - F ko:K01756 ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
IJBIPKIF_00260 6.33e-74 - - - - - - - -
IJBIPKIF_00261 7.08e-137 - - - - - - - -
IJBIPKIF_00262 1.41e-209 yicL - - EG - - - EamA-like transporter family
IJBIPKIF_00263 1.03e-211 - - - EG - - - EamA-like transporter family
IJBIPKIF_00264 8.16e-212 - - - EG - - - EamA-like transporter family
IJBIPKIF_00265 1.96e-108 - - - M - - - NlpC/P60 family
IJBIPKIF_00266 1.91e-171 cobQ - - S ko:K07009 - ko00000 glutamine amidotransferase
IJBIPKIF_00267 9.67e-220 - - - L ko:K07496 - ko00000 transposase, IS605 OrfB family
IJBIPKIF_00268 1.23e-83 - - - S - - - Protein conserved in bacteria
IJBIPKIF_00269 6.65e-194 thiD 2.7.1.49, 2.7.4.7 - H ko:K00941 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko00002,ko01000 Phosphomethylpyrimidine kinase
IJBIPKIF_00270 0.0 glpK 2.7.1.30 - F ko:K00864 ko00561,ko01100,ko03320,ko04626,map00561,map01100,map03320,map04626 ko00000,ko00001,ko01000,ko04147 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
IJBIPKIF_00271 1.06e-20 - - - - - - - -
IJBIPKIF_00272 4.8e-99 - - - - - - - -
IJBIPKIF_00273 0.0 - - - V ko:K06147,ko:K06148 - ko00000,ko02000 ABC transporter transmembrane region
IJBIPKIF_00274 7.79e-190 - 3.1.3.48 - T ko:K01104 - ko00000,ko01000 Tyrosine phosphatase family
IJBIPKIF_00275 7.43e-229 yvdE - - K - - - helix_turn _helix lactose operon repressor
IJBIPKIF_00276 1.82e-276 ackA 2.7.2.1 - F ko:K00925 ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
IJBIPKIF_00277 0.0 malA1 3.2.1.10, 3.2.1.20 GH13,GH31 G ko:K01182,ko:K01187 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 Alpha amylase, catalytic domain
IJBIPKIF_00278 0.0 nplT 3.2.1.133, 3.2.1.135, 3.2.1.54 GH13 G ko:K01208 ko00500,ko01100,map00500,map01100 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 13 family
IJBIPKIF_00279 0.0 mapA 2.4.1.8 GH65 G ko:K00691 ko00500,ko01100,map00500,map01100 ko00000,ko00001,ko01000 hydrolase, family 65, central catalytic
IJBIPKIF_00280 1.23e-150 pgmB 5.4.2.6 - S ko:K01838 ko00500,map00500 ko00000,ko00001,ko01000 beta-phosphoglucomutase
IJBIPKIF_00281 2.45e-227 - - - S - - - SLAP domain
IJBIPKIF_00282 0.0 - - - M - - - Peptidase family M1 domain
IJBIPKIF_00283 2.76e-249 - - - S - - - Bacteriocin helveticin-J
IJBIPKIF_00284 2.68e-67 - - - L ko:K07473 - ko00000,ko02048 RelB antitoxin
IJBIPKIF_00285 5.58e-192 hflC - - O ko:K04087 - ko00000,ko00002,ko01000 prohibitin homologues
IJBIPKIF_00286 1.9e-160 - - - C - - - Flavodoxin
IJBIPKIF_00287 0.0 fhs 6.3.4.3 - F ko:K01938 ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Belongs to the formate--tetrahydrofolate ligase family
IJBIPKIF_00288 7.36e-109 purE 5.4.99.18 - F ko:K01588 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
IJBIPKIF_00289 1.85e-269 purK 6.3.4.18 - F ko:K01589 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
IJBIPKIF_00290 1.24e-172 purC 6.3.2.6 - F ko:K01923 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Belongs to the SAICAR synthetase family
IJBIPKIF_00291 1.88e-52 purS 6.3.5.3 - F ko:K01952 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
IJBIPKIF_00292 1.15e-165 purQ 6.3.5.3 - F ko:K01952 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
IJBIPKIF_00293 0.0 purL 6.3.5.3 - F ko:K01952 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
IJBIPKIF_00294 0.0 purF 2.4.2.14 - F ko:K00764 ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000,ko01002 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
IJBIPKIF_00295 3.52e-253 purM 6.3.3.1 - F ko:K01933 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Phosphoribosylformylglycinamidine cyclo-ligase
IJBIPKIF_00296 3.61e-144 purN 2.1.2.2 - F ko:K11175 ko00230,ko00670,ko01100,ko01110,ko01130,map00230,map00670,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
IJBIPKIF_00297 0.0 purH 2.1.2.3, 3.5.4.10 - F ko:K00602 ko00230,ko00670,ko01100,ko01110,ko01130,ko01523,map00230,map00670,map01100,map01110,map01130,map01523 ko00000,ko00001,ko00002,ko01000,ko04147 Bifunctional purine biosynthesis protein PurH
IJBIPKIF_00298 0.0 purD 6.3.4.13 - F ko:K01945 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Belongs to the GARS family
IJBIPKIF_00299 1.99e-99 smpB - - J ko:K03664 - ko00000 the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
IJBIPKIF_00300 0.0 rnr - - J ko:K12573 ko03018,map03018 ko00000,ko00001,ko01000,ko03016,ko03019 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
IJBIPKIF_00301 5.29e-40 secG - - U ko:K03075 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Preprotein translocase
IJBIPKIF_00302 0.0 ltaS 2.7.8.20 - M ko:K19005 ko00561,ko01100,map00561,map01100 ko00000,ko00001,ko01000 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
IJBIPKIF_00303 5.18e-228 mprF - - S ko:K07027 - ko00000,ko02000 Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
IJBIPKIF_00304 1.5e-255 cpoA 2.4.1.208 GT4 M ko:K13677,ko:K13678 ko00561,ko01100,map00561,map01100 ko00000,ko00001,ko01000,ko01003 Glycosyltransferase, group 1 family protein
IJBIPKIF_00305 2.24e-284 - 2.4.1.337 GT4 M ko:K19002 ko00561,ko01100,map00561,map01100 ko00000,ko00001,ko01000,ko01003 Glycosyl transferase 4-like domain
IJBIPKIF_00317 3.83e-61 - - - L - - - Helicase C-terminal domain protein
IJBIPKIF_00318 0.0 - - - L - - - Helicase C-terminal domain protein
IJBIPKIF_00319 1.98e-96 mutT 3.6.1.55 - L ko:K03574 - ko00000,ko01000,ko03400 NUDIX domain
IJBIPKIF_00336 9.65e-42 - - - K - - - LysR substrate binding domain
IJBIPKIF_00337 3.73e-65 - - - K - - - LysR substrate binding domain
IJBIPKIF_00338 4.38e-74 - - - S - - - FMN_bind
IJBIPKIF_00339 1.87e-292 - 1.3.5.4 - C ko:K00244 ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020 ko00000,ko00001,ko00002,ko01000 FAD binding domain
IJBIPKIF_00340 3.17e-149 - - - K - - - Transcriptional regulator, LysR family
IJBIPKIF_00341 2.5e-51 - - - S - - - Cytochrome B5
IJBIPKIF_00342 2.27e-214 arbZ - - I - - - Phosphate acyltransferases
IJBIPKIF_00343 1.34e-235 - - - M - - - Glycosyl transferase family 8
IJBIPKIF_00344 1.07e-238 - - - M - - - Glycosyl transferase family 8
IJBIPKIF_00345 6.45e-204 arbx - - M - - - Glycosyl transferase family 8
IJBIPKIF_00346 1.11e-191 - - - I - - - Acyl-transferase
IJBIPKIF_00347 8.36e-102 - - - - - - - -
IJBIPKIF_00348 0.0 - - - P ko:K06148 - ko00000,ko02000 ABC transporter
IJBIPKIF_00349 0.0 - - - V ko:K06148 - ko00000,ko02000 ABC-type multidrug transport system, ATPase and permease components
IJBIPKIF_00350 0.0 - - - G - - - isomerase
IJBIPKIF_00351 1.11e-210 rbsK 2.7.1.15 - H ko:K00852 ko00030,map00030 ko00000,ko00001,ko01000 Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
IJBIPKIF_00352 1.43e-87 rbsD 5.4.99.62 - G ko:K06726 ko02010,map02010 ko00000,ko00001,ko01000 Catalyzes the interconversion of beta-pyran and beta- furan forms of D-ribose
IJBIPKIF_00353 0.0 rbsA 3.6.3.17 - G ko:K10441 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ABC transporter
IJBIPKIF_00354 2.7e-10 rbsC - - U ko:K10440 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Belongs to the binding-protein-dependent transport system permease family
IJBIPKIF_00355 8.27e-190 rbsC - - U ko:K10440 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Belongs to the binding-protein-dependent transport system permease family
IJBIPKIF_00356 1.05e-225 - - - G ko:K10439 ko02010,ko02030,map02010,map02030 ko00000,ko00001,ko00002,ko02000 Periplasmic binding protein domain
IJBIPKIF_00357 0.0 - - - G - - - Protein of unknown function (DUF4038)
IJBIPKIF_00358 5.47e-199 - - - K ko:K03488 - ko00000,ko03000 CAT RNA binding domain
IJBIPKIF_00359 0.0 - - - G ko:K02755,ko:K02756,ko:K02757 ko02060,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 phosphotransferase system
IJBIPKIF_00360 4.63e-225 - - - I - - - alpha/beta hydrolase fold
IJBIPKIF_00361 9.97e-103 - 3.5.1.105 - G ko:K03478 - ko00000,ko01000 YdjC-like protein
IJBIPKIF_00362 7.57e-211 - - - M - - - Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
IJBIPKIF_00363 5.84e-129 - - - M - - - LPXTG-motif cell wall anchor domain protein
IJBIPKIF_00364 5.68e-165 - - - M - - - Glycosyl transferases group 1
IJBIPKIF_00365 0.0 treC 3.2.1.93 GH13 G ko:K01226 ko00500,map00500 ko00000,ko00001,ko01000 Alpha amylase, catalytic domain protein
IJBIPKIF_00366 2.78e-166 treR - - K ko:K03486 - ko00000,ko03000 UTRA
IJBIPKIF_00367 0.0 treB - - G ko:K02755,ko:K02756,ko:K02757 ko02060,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 phosphotransferase system
IJBIPKIF_00368 5.05e-313 - - - - - - - -
IJBIPKIF_00369 1.84e-281 - - - S - - - Putative peptidoglycan binding domain
IJBIPKIF_00370 2.46e-121 - - - S - - - ECF-type riboflavin transporter, S component
IJBIPKIF_00371 2.42e-201 pdxK 2.7.1.35 - H ko:K00868 ko00750,ko01100,map00750,map01100 ko00000,ko00001,ko01000 Phosphomethylpyrimidine kinase
IJBIPKIF_00372 1.71e-265 - - - V - - - Beta-lactamase
IJBIPKIF_00373 5.22e-89 yvbK - - K - - - COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
IJBIPKIF_00374 8.43e-148 - - - I - - - Acid phosphatase homologues
IJBIPKIF_00375 4.33e-234 mmuM 2.1.1.10 - H ko:K00547 ko00270,ko01100,ko01110,map00270,map01100,map01110 ko00000,ko00001,ko01000 homocysteine S-methyltransferase
IJBIPKIF_00376 0.0 uvrA2 - - L ko:K03701 ko03420,map03420 ko00000,ko00001,ko03400 excinuclease ABC, A subunit
IJBIPKIF_00377 1.47e-105 - - - C - - - Flavodoxin
IJBIPKIF_00378 0.0 recQ 3.6.4.12 - L ko:K03654 ko03018,map03018 ko00000,ko00001,ko01000,ko03400 ATP-dependent DNA helicase RecQ
IJBIPKIF_00379 7.3e-304 ktrB - - P ko:K03498 - ko00000,ko02000 Potassium uptake protein
IJBIPKIF_00380 6.35e-154 ktrA - - P ko:K03499 - ko00000,ko02000 domain protein
IJBIPKIF_00381 1.13e-312 ynbB - - P - - - aluminum resistance
IJBIPKIF_00382 0.0 speA 4.1.1.17, 4.1.1.18, 4.1.1.19 - E ko:K01581,ko:K01582,ko:K01585 ko00310,ko00330,ko00480,ko00960,ko01100,ko01110,ko01130,map00310,map00330,map00480,map00960,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Orn/Lys/Arg decarboxylase, C-terminal domain
IJBIPKIF_00383 0.0 - - - E - - - Amino acid permease
IJBIPKIF_00384 0.0 pepV 3.5.1.18 - E ko:K01270,ko:K01274,ko:K01439 ko00300,ko00480,ko01100,ko01120,ko01230,map00300,map00480,map01100,map01120,map01230 ko00000,ko00001,ko00002,ko01000,ko01002 dipeptidase PepV
IJBIPKIF_00385 9.18e-83 crcB - - U ko:K06199 - ko00000,ko02000 Important for reducing fluoride concentration in the cell, thus reducing its toxicity
IJBIPKIF_00386 7.42e-89 crcB1 - - U ko:K06199 - ko00000,ko02000 Important for reducing fluoride concentration in the cell, thus reducing its toxicity
IJBIPKIF_00387 2.82e-194 - - - L - - - Phage integrase, N-terminal SAM-like domain
IJBIPKIF_00388 1.25e-204 - - - S - - - Alpha/beta hydrolase of unknown function (DUF915)
IJBIPKIF_00389 4.82e-296 celB - - G ko:K02761 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko02000 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
IJBIPKIF_00390 1.72e-85 - - - - - - - -
IJBIPKIF_00391 7.16e-232 lacX 5.1.3.3 - G ko:K01785 ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130 ko00000,ko00001,ko00002,ko01000 Aldose 1-epimerase
IJBIPKIF_00392 4.61e-308 hslU - - O ko:K03667 - ko00000,ko03110 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
IJBIPKIF_00393 3.29e-116 hslV 3.4.25.2 - O ko:K01419 - ko00000,ko01000,ko01002 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
IJBIPKIF_00394 2.27e-216 xerC - - D ko:K03733,ko:K04763 - ko00000,ko03036 Phage integrase, N-terminal SAM-like domain
IJBIPKIF_00395 2.09e-315 trmFO 2.1.1.74 - J ko:K04094 - ko00000,ko01000,ko03016,ko03036 Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
IJBIPKIF_00396 0.0 topA 5.99.1.2 - L ko:K03168 - ko00000,ko01000,ko03032,ko03400 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
IJBIPKIF_00397 1.07e-201 dprA - - LU ko:K04096 - ko00000 DNA protecting protein DprA
IJBIPKIF_00398 8.96e-172 rnhB 3.1.26.4 - L ko:K03470 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
IJBIPKIF_00399 8.81e-205 rbgA - - S ko:K14540 - ko00000,ko03009 Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
IJBIPKIF_00400 0.0 nhaP4 - - P ko:K03316 - ko00000 Sodium proton antiporter
IJBIPKIF_00401 1.64e-47 yozE - - S - - - Belongs to the UPF0346 family
IJBIPKIF_00402 6.34e-193 degV3 - - S - - - Uncharacterised protein, DegV family COG1307
IJBIPKIF_00403 7.33e-143 hlyIII - - S ko:K11068 - ko00000,ko02042 protein, hemolysin III
IJBIPKIF_00404 8.15e-284 cca 2.7.7.72 - J ko:K00974 ko03013,map03013 ko00000,ko00001,ko01000,ko03016 Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
IJBIPKIF_00405 1.3e-207 XK27_10395 - - S - - - Uncharacterised 5xTM membrane BCR, YitT family COG1284
IJBIPKIF_00406 2.22e-296 XK27_05225 - - S - - - Tetratricopeptide repeat protein
IJBIPKIF_00407 1.17e-56 hup - - L ko:K03530 - ko00000,ko03032,ko03036,ko03400 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
IJBIPKIF_00408 3.15e-313 der - - S ko:K03977 - ko00000,ko03009 GTPase that plays an essential role in the late steps of ribosome biogenesis
IJBIPKIF_00409 4.07e-270 rpsA - - J ko:K02945 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal protein S1
IJBIPKIF_00410 1.28e-147 cmk 2.7.4.25 - F ko:K00945 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the cytidylate kinase family. Type 1 subfamily
IJBIPKIF_00411 7.33e-71 - - - M - - - Lysin motif
IJBIPKIF_00412 6.79e-152 ribU - - U - - - Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
IJBIPKIF_00413 3.66e-165 rluB 5.4.99.22 - J ko:K06178 - ko00000,ko01000,ko03009 Belongs to the pseudouridine synthase RsuA family
IJBIPKIF_00414 5.75e-135 scpB - - D ko:K06024 - ko00000,ko03036 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
IJBIPKIF_00415 1.81e-169 scpA - - D ko:K05896 - ko00000,ko03036 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
IJBIPKIF_00416 6.56e-81 ribT - - K ko:K02859 - ko00000 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
IJBIPKIF_00417 2.19e-218 xerD - - D ko:K04763 - ko00000,ko03036 recombinase XerD
IJBIPKIF_00418 1e-216 yitL - - S ko:K00243 - ko00000 S1 domain
IJBIPKIF_00419 0.0 pyk 2.7.1.40 - G ko:K00873 ko00010,ko00230,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko04930,ko05165,ko05203,ko05230,map00010,map00230,map00620,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map04930,map05165,map05203,map05230 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Belongs to the pyruvate kinase family
IJBIPKIF_00420 7.76e-233 pfkA 2.7.1.11 - F ko:K00850 ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04152,ko05230,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04152,map05230 ko00000,ko00001,ko00002,ko01000,ko01009,ko03019 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
IJBIPKIF_00421 0.0 dnaE 2.7.7.7 - L ko:K02337 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase
IJBIPKIF_00422 3.9e-33 - - - S - - - Protein of unknown function (DUF2929)
IJBIPKIF_00423 0.0 yfkN 3.1.3.6, 3.1.4.16 - F ko:K01119 ko00230,ko00240,map00230,map00240 ko00000,ko00001,ko01000 Belongs to the 5'-nucleotidase family
IJBIPKIF_00424 3.62e-38 rpmF - - J ko:K02911 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011,ko03029 Belongs to the bacterial ribosomal protein bL32 family
IJBIPKIF_00425 2.25e-45 - - - S - - - Lipopolysaccharide assembly protein A domain
IJBIPKIF_00426 1.5e-186 - - - S ko:K07124 - ko00000 Belongs to the short-chain dehydrogenases reductases (SDR) family
IJBIPKIF_00427 6.35e-228 rnz 3.1.26.11 - J ko:K00784 ko03013,map03013 ko00000,ko00001,ko01000,ko03016 Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
IJBIPKIF_00428 0.0 oatA - - I - - - Acyltransferase
IJBIPKIF_00429 3.01e-310 obg - - S ko:K03979 - ko00000,ko01000,ko03009 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
IJBIPKIF_00430 0.0 uvrC - - L ko:K03703 ko03420,map03420 ko00000,ko00001,ko03400 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
IJBIPKIF_00431 4.52e-140 yngC - - S - - - SNARE associated Golgi protein
IJBIPKIF_00432 5.04e-298 yhdG - - E ko:K03294 - ko00000 Amino Acid
IJBIPKIF_00433 2.31e-230 gyaR 1.1.1.26, 1.1.1.399, 1.1.1.95 - CH ko:K00015,ko:K00058 ko00260,ko00630,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00260,map00630,map00680,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
IJBIPKIF_00434 3.29e-193 yxeH - - S - - - hydrolase
IJBIPKIF_00435 2.72e-197 - - - S - - - reductase
IJBIPKIF_00436 1.03e-285 coaBC 4.1.1.36, 6.3.2.5 - H ko:K01598,ko:K13038 ko00770,ko01100,map00770,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
IJBIPKIF_00437 9.94e-287 aspC - - E ko:K00841 ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Aminotransferase
IJBIPKIF_00438 0.0 aspS 6.1.1.12 - J ko:K01876 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
IJBIPKIF_00439 1.74e-311 hisS 6.1.1.21 - J ko:K01892 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 histidyl-tRNA synthetase
IJBIPKIF_00440 2.56e-99 dtd - - J ko:K07560 - ko00000,ko01000,ko03016 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
IJBIPKIF_00441 0.0 relA 2.7.6.5 - KT ko:K00951 ko00230,map00230 ko00000,ko00001,ko01000 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
IJBIPKIF_00442 1.17e-65 - - - - - - - -
IJBIPKIF_00443 1.32e-221 prmA - - J ko:K02687 - ko00000,ko01000,ko03009 Ribosomal protein L11 methyltransferase
IJBIPKIF_00444 7.54e-115 ybaK - - S ko:K03976 - ko00000,ko01000,ko03016 Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
IJBIPKIF_00445 3.82e-312 - - - S - - - Putative threonine/serine exporter
IJBIPKIF_00446 1.56e-228 citR - - K - - - Putative sugar-binding domain
IJBIPKIF_00447 5.21e-71 - - - - - - - -
IJBIPKIF_00448 2.09e-83 - - - S - - - Domain of unknown function DUF1828
IJBIPKIF_00449 4.42e-124 - - - S ko:K16924 - ko00000,ko00002,ko02000 UPF0397 protein
IJBIPKIF_00450 0.0 ykoD - - P ko:K16786,ko:K16787 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ABC transporter, ATP-binding protein
IJBIPKIF_00451 1.14e-192 cbiQ - - P ko:K16785 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 cobalt transport
IJBIPKIF_00452 6.03e-19 - - - - - - - -
IJBIPKIF_00453 1.24e-93 ytwI - - S - - - Protein of unknown function (DUF441)
IJBIPKIF_00454 0.0 citF 2.8.3.10 - H ko:K01643 ko02020,map02020 ko00000,ko00001,ko01000 Citrate (pro-3S)-lyase alpha chain
IJBIPKIF_00455 6.24e-215 citE 4.1.3.34 - G ko:K01644 ko02020,map02020 ko00000,ko00001,ko01000 Belongs to the HpcH HpaI aldolase family
IJBIPKIF_00456 2.76e-60 citD - - C ko:K01646 ko02020,map02020 ko00000,ko00001 Covalent carrier of the coenzyme of citrate lyase
IJBIPKIF_00457 4.25e-248 citC 6.2.1.22 - H ko:K01910 ko02020,map02020 ko00000,ko00001,ko01000 Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
IJBIPKIF_00458 7.54e-200 - - - I - - - Alpha/beta hydrolase family
IJBIPKIF_00459 0.0 citP - - P ko:K03319 - ko00000 Sodium:sulfate symporter transmembrane region
IJBIPKIF_00460 0.0 pepC4 3.4.22.40 - E ko:K01372 - ko00000,ko01000,ko01002 Peptidase C1-like family
IJBIPKIF_00461 5.14e-216 ldh 1.1.1.27 - C ko:K00016 ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922 ko00000,ko00001,ko01000,ko04147 Belongs to the LDH MDH superfamily. LDH family
IJBIPKIF_00462 0.0 - - - M - - - domain protein
IJBIPKIF_00463 0.0 frdA 1.3.5.4 - C ko:K00244 ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020 ko00000,ko00001,ko00002,ko01000 FAD binding domain
IJBIPKIF_00464 0.0 fumC 4.2.1.2 - C ko:K01679 ko00020,ko00620,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko04934,ko05200,ko05211,map00020,map00620,map00720,map01100,map01110,map01120,map01130,map01200,map04934,map05200,map05211 ko00000,ko00001,ko00002,ko01000 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
IJBIPKIF_00465 4.45e-127 metI - - P ko:K02072 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter permease
IJBIPKIF_00466 2.07e-240 metN - - P ko:K02071 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
IJBIPKIF_00467 1.03e-203 metQ - - P ko:K02073 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Belongs to the nlpA lipoprotein family
IJBIPKIF_00468 0.0 aha1 - - P ko:K12952 - ko00000,ko01000 E1-E2 ATPase
IJBIPKIF_00469 1.53e-122 folA 1.5.1.3 - H ko:K00287 ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523 ko00000,ko00001,ko00002,ko01000 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
IJBIPKIF_00470 1.21e-244 thyA 2.1.1.45 - F ko:K00560 ko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523 ko00000,ko00001,ko00002,ko01000 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
IJBIPKIF_00471 0.0 yifK - - E ko:K03293 - ko00000 Amino acid permease
IJBIPKIF_00472 2.16e-39 - - - K - - - Helix-turn-helix XRE-family like proteins
IJBIPKIF_00473 9.27e-75 - - - K - - - Cro/C1-type HTH DNA-binding domain
IJBIPKIF_00474 0.000281 - - - - - - - -
IJBIPKIF_00475 1.98e-129 - - - - - - - -
IJBIPKIF_00476 1.09e-34 - - - - - - - -
IJBIPKIF_00477 2.59e-229 int3 - - L - - - Belongs to the 'phage' integrase family
IJBIPKIF_00479 1.47e-244 cbh 3.5.1.24 - M ko:K01442 ko00120,ko00121,ko01100,map00120,map00121,map01100 ko00000,ko00001,ko01000 Linear amide C-N hydrolase, choloylglycine hydrolase family protein
IJBIPKIF_00480 2.64e-128 - - - I - - - PAP2 superfamily
IJBIPKIF_00481 1.19e-194 - - - S - - - Uncharacterised protein, DegV family COG1307
IJBIPKIF_00482 2.12e-312 eno 4.2.1.11 - G ko:K01689 ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066 ko00000,ko00001,ko00002,ko01000,ko03019,ko04147 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
IJBIPKIF_00483 4.93e-141 - - - S - - - Domain of unknown function (DUF4767)
IJBIPKIF_00484 1.01e-111 yfhC - - C - - - Nitroreductase family
IJBIPKIF_00485 3.69e-207 ypbG 2.7.1.2 - GK ko:K00845 ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 ROK family
IJBIPKIF_00486 0.0 pbg6 3.2.1.86 GT1 G ko:K01223 ko00010,ko00500,map00010,map00500 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 1 family
IJBIPKIF_00487 0.0 pts23C - - G ko:K02761 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko02000 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
IJBIPKIF_00488 1.91e-55 - - - - - - - -
IJBIPKIF_00489 1.45e-172 - - - K ko:K03492 - ko00000,ko03000 UTRA
IJBIPKIF_00490 0.0 - 3.2.1.86 GT1 G ko:K01223 ko00010,ko00500,map00010,map00500 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 1 family
IJBIPKIF_00491 2.84e-94 - - - S - - - Domain of unknown function (DUF3284)
IJBIPKIF_00492 1.68e-179 celD - - G ko:K02761 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko02000 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
IJBIPKIF_00493 4.68e-104 - - - - - - - -
IJBIPKIF_00494 4.75e-80 celC 2.7.1.196, 2.7.1.205 - G ko:K02759 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system, Lactose Cellobiose specific IIA subunit
IJBIPKIF_00495 4.98e-74 pts20B 2.7.1.196, 2.7.1.205 - G ko:K02760 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system, Lactose/Cellobiose specific IIB subunit
IJBIPKIF_00496 1.62e-166 - - - K ko:K03492 - ko00000,ko03000 UTRA domain
IJBIPKIF_00497 0.0 pbg4 3.2.1.86 GT1 G ko:K01223 ko00010,ko00500,map00010,map00500 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 1 family
IJBIPKIF_00498 6.28e-10 - - - S - - - CsbD-like
IJBIPKIF_00499 3.08e-52 - - - S - - - Transglycosylase associated protein
IJBIPKIF_00500 4.23e-93 alkD - - L - - - DNA alkylation repair enzyme
IJBIPKIF_00501 1.93e-25 alkD - - L - - - DNA alkylation repair enzyme
IJBIPKIF_00505 8.04e-188 - - - - - - - -
IJBIPKIF_00506 5.52e-24 adhC 1.1.1.90 - C ko:K00055,ko:K06898 ko00350,ko00360,ko00622,ko00623,ko01100,ko01120,ko01220,map00350,map00360,map00622,map00623,map01100,map01120,map01220 ko00000,ko00001,ko00002,ko01000 S-(hydroxymethyl)glutathione dehydrogenase activity
IJBIPKIF_00507 4.65e-228 iunH 3.2.2.1 - F ko:K01239 ko00230,ko00760,ko01100,map00230,map00760,map01100 ko00000,ko00001,ko01000 inosine-uridine preferring nucleoside hydrolase
IJBIPKIF_00508 0.0 - - - - - - - -
IJBIPKIF_00509 1.01e-104 - - - - - - - -
IJBIPKIF_00510 1.18e-55 - - - C - - - FMN_bind
IJBIPKIF_00511 0.0 - - - I - - - Protein of unknown function (DUF2974)
IJBIPKIF_00512 8.12e-262 pbpX1 - - V - - - Beta-lactamase
IJBIPKIF_00513 4.28e-253 asd 1.2.1.11 - E ko:K00133 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
IJBIPKIF_00514 2.42e-281 aspC - - E ko:K00841 ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Aminotransferase
IJBIPKIF_00515 1.23e-183 dapB 1.17.1.8 - E ko:K00215 ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
IJBIPKIF_00516 1.14e-225 dapA 4.3.3.7 - E ko:K01714 ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
IJBIPKIF_00517 5.48e-283 hipO 3.5.1.47 - E ko:K05823 ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000,ko01002 Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
IJBIPKIF_00518 1.39e-106 dapH 2.3.1.117, 2.3.1.89 - E ko:K00674,ko:K05822 ko00300,ko01100,ko01110,ko01120,ko01230,map00300,map01100,map01110,map01120,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
IJBIPKIF_00519 0.0 lysA 4.1.1.20 - E ko:K01586 ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
IJBIPKIF_00520 0.0 lysC 2.7.2.4 - E ko:K00928 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the aspartokinase family
IJBIPKIF_00521 7.3e-245 dapF 5.1.1.7 - E ko:K01778 ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
IJBIPKIF_00522 1.17e-138 engB - - D ko:K03978 - ko00000,ko03036 Necessary for normal cell division and for the maintenance of normal septation
IJBIPKIF_00523 8.42e-299 clpX - - O ko:K03544 ko04112,map04112 ko00000,ko00001,ko03110 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
IJBIPKIF_00524 3.02e-294 tig - - D ko:K03545 - ko00000 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
IJBIPKIF_00525 8.19e-287 tuf - - J ko:K02358,ko:K15771 ko02010,map02010 ko00000,ko00001,ko00002,ko02000,ko03012,ko03029,ko04147 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
IJBIPKIF_00526 1.45e-195 - - - - - - - -
IJBIPKIF_00527 0.0 rnjB - - J ko:K12574 ko03018,map03018 ko00000,ko00001,ko01000,ko03019 An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
IJBIPKIF_00528 4.08e-55 rpsO - - J ko:K02956 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
IJBIPKIF_00529 3.78e-48 rpsT - - J ko:K02968 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds directly to 16S ribosomal RNA
IJBIPKIF_00530 3.38e-227 holA 2.7.7.7 - L ko:K02340 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase III delta subunit
IJBIPKIF_00531 0.0 comEC - - S ko:K02238 - ko00000,ko00002,ko02044 Competence protein ComEC
IJBIPKIF_00532 2.19e-131 comEA - - L ko:K02237 - ko00000,ko00002,ko02044 Competence protein ComEA
IJBIPKIF_00533 1.37e-246 lon - - T ko:K07177 ko02024,map02024 ko00000,ko00001,ko01002 Belongs to the peptidase S16 family
IJBIPKIF_00534 7.07e-107 coaD 2.7.7.3 - H ko:K00954 ko00770,ko01100,map00770,map01100 ko00000,ko00001,ko00002,ko01000 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
IJBIPKIF_00535 5.62e-126 rsmD 2.1.1.171 - L ko:K08316 - ko00000,ko01000,ko03009 RNA methyltransferase, RsmD family
IJBIPKIF_00536 4.73e-69 ylbG - - S - - - Uncharacterized protein conserved in bacteria (DUF2129)
IJBIPKIF_00537 2.75e-268 ftsW - - D ko:K03588 ko04112,map04112 ko00000,ko00001,ko02000,ko03036 Belongs to the SEDS family
IJBIPKIF_00538 0.0 typA - - T ko:K06207 - ko00000 GTP-binding protein TypA
IJBIPKIF_00539 2.52e-131 def 3.5.1.88 - J ko:K01462 - ko00000,ko01000 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
IJBIPKIF_00540 3.13e-46 ykzG - - S - - - Belongs to the UPF0356 family
IJBIPKIF_00541 0.0 rnjA - - J ko:K12574 ko03018,map03018 ko00000,ko00001,ko01000,ko03019 An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
IJBIPKIF_00542 1.29e-233 ytlR - - I - - - Diacylglycerol kinase catalytic domain
IJBIPKIF_00543 0.0 - - - L - - - Nuclease-related domain
IJBIPKIF_00544 0.0 recD2 3.1.11.5 - L ko:K03581 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
IJBIPKIF_00545 2.93e-150 - - - S - - - repeat protein
IJBIPKIF_00546 1.58e-161 pgm - - G - - - Phosphoglycerate mutase family
IJBIPKIF_00547 1.62e-280 mnmA 2.8.1.13 - J ko:K00566 ko04122,map04122 ko00000,ko00001,ko01000,ko03016 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
IJBIPKIF_00548 1.47e-76 XK27_04120 - - S - - - Putative amino acid metabolism
IJBIPKIF_00549 1.02e-163 mtnN 3.2.2.9 - E ko:K01243 ko00270,ko01100,ko01230,map00270,map01100,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
IJBIPKIF_00550 4.49e-42 - - - - - - - -
IJBIPKIF_00551 6.29e-135 nudF 3.6.1.13 - L ko:K01515 ko00230,map00230 ko00000,ko00001,ko01000 ADP-ribose pyrophosphatase
IJBIPKIF_00552 8.09e-44 cspA - - K ko:K03704 - ko00000,ko03000 'Cold-shock' DNA-binding domain
IJBIPKIF_00553 0.0 ileS 6.1.1.5 - J ko:K01870 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
IJBIPKIF_00554 1.18e-141 divIVA - - D ko:K04074 - ko00000,ko03036 DivIVA domain protein
IJBIPKIF_00555 4.87e-193 ylmH - - S - - - S4 domain protein
IJBIPKIF_00556 1.36e-39 yggT - - S ko:K02221 - ko00000,ko02044 YGGT family
IJBIPKIF_00557 4.09e-96 sepF - - D ko:K09772 - ko00000,ko03036 Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
IJBIPKIF_00558 5.9e-313 ftsZ - - D ko:K03531 ko04112,map04112 ko00000,ko00001,ko02048,ko03036,ko04812 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
IJBIPKIF_00559 1.02e-312 ftsA - - D ko:K03590 ko04112,map04112 ko00000,ko00001,ko03036,ko04812 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
IJBIPKIF_00560 1.71e-182 divIB - - D ko:K03589 ko04112,map04112 ko00000,ko00001,ko03036 Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
IJBIPKIF_00561 4.93e-267 murG 2.4.1.227 GT28 M ko:K02563 ko00550,ko01100,ko01502,ko04112,map00550,map01100,map01502,map04112 ko00000,ko00001,ko01000,ko01011 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
IJBIPKIF_00562 0.0 murD 6.3.2.9 - M ko:K01925 ko00471,ko00550,ko01100,map00471,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
IJBIPKIF_00563 8e-227 mraY 2.7.8.13 - M ko:K01000 ko00550,ko01100,ko01502,map00550,map01100,map01502 ko00000,ko00001,ko01000,ko01011 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
IJBIPKIF_00564 0.0 pbpX - - M ko:K08724,ko:K12552,ko:K12556 ko00550,ko01100,ko01501,map00550,map01100,map01501 ko00000,ko00001,ko01000,ko01011 Penicillin-binding Protein
IJBIPKIF_00565 1.32e-71 ftsL - - D - - - Cell division protein FtsL
IJBIPKIF_00566 5.41e-226 rsmH 2.1.1.199 - J ko:K03438 - ko00000,ko01000,ko03009 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
IJBIPKIF_00567 3.95e-93 mraZ - - K ko:K03925 - ko00000 Belongs to the MraZ family
IJBIPKIF_00568 4.84e-71 - - - S - - - Protein of unknown function (DUF3397)
IJBIPKIF_00569 1.45e-14 - - - S - - - Protein of unknown function (DUF4044)
IJBIPKIF_00570 6.61e-123 mreD - - - ko:K03571 - ko00000,ko03036 -
IJBIPKIF_00571 1.82e-192 mreC - - M ko:K03570 - ko00000,ko03036 Involved in formation and maintenance of cell shape
IJBIPKIF_00572 2.03e-226 mreB - - D ko:K03569 - ko00000,ko02048,ko03036,ko04812 cell shape determining protein MreB
IJBIPKIF_00573 2.34e-148 radC - - L ko:K03630 - ko00000 DNA repair protein
IJBIPKIF_00574 1.83e-163 - - - S - - - Haloacid dehalogenase-like hydrolase
IJBIPKIF_00575 2.55e-306 folC 6.3.2.12, 6.3.2.17 - H ko:K11754 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the folylpolyglutamate synthase family
IJBIPKIF_00576 0.0 valS 6.1.1.9 - J ko:K01873 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
IJBIPKIF_00577 1.56e-165 rsuA 5.4.99.19 - J ko:K06183 - ko00000,ko01000,ko03009 Belongs to the pseudouridine synthase RsuA family
IJBIPKIF_00578 4.62e-293 thiI 2.8.1.4 - H ko:K03151 ko00730,ko01100,ko04122,map00730,map01100,map04122 ko00000,ko00001,ko01000,ko03016 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
IJBIPKIF_00579 1.29e-278 iscS2 2.8.1.7 - E ko:K04487 ko00730,ko01100,ko04122,map00730,map01100,map04122 ko00000,ko00001,ko01000,ko02048,ko03016,ko03029 Aminotransferase class V
IJBIPKIF_00580 0.0 ezrA - - D ko:K06286 - ko00000,ko03036 modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
IJBIPKIF_00581 1.07e-142 rpsD - - J ko:K02986 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
IJBIPKIF_00582 9.44e-109 - - - S - - - Protein of unknown function (DUF1694)
IJBIPKIF_00583 1.18e-310 rarA - - L ko:K07478 - ko00000 recombination factor protein RarA
IJBIPKIF_00584 1.41e-49 - - - - - - - -
IJBIPKIF_00585 6.39e-102 uspA - - T - - - universal stress protein
IJBIPKIF_00586 1.18e-275 rodA - - D ko:K05837 - ko00000,ko03036 Belongs to the SEDS family
IJBIPKIF_00587 1.26e-46 - - - S - - - Protein of unknown function (DUF2969)
IJBIPKIF_00588 7.58e-67 ytjA - - S ko:K08998 - ko00000 Could be involved in insertion of integral membrane proteins into the membrane
IJBIPKIF_00589 2.04e-228 mbl - - D ko:K03569 - ko00000,ko02048,ko03036,ko04812 Cell shape determining protein MreB Mrl
IJBIPKIF_00590 4.22e-41 - - - S - - - Protein of unknown function (DUF1146)
IJBIPKIF_00591 7.03e-93 atpC - - C ko:K02114 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 Produces ATP from ADP in the presence of a proton gradient across the membrane
IJBIPKIF_00592 0.0 atpD 3.6.3.14 - C ko:K02112 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194,ko01000 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
IJBIPKIF_00593 1.22e-220 atpG - - C ko:K02115 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
IJBIPKIF_00594 0.0 atpA 3.6.3.14 - C ko:K02111 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194,ko01000 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
IJBIPKIF_00595 6.82e-122 atpH - - C ko:K02113 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
IJBIPKIF_00596 4.97e-95 atpF - - C ko:K02109 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
IJBIPKIF_00597 4.36e-39 atpE - - C ko:K02110 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
IJBIPKIF_00598 4.13e-166 atpB - - C ko:K02108 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194,ko03110 it plays a direct role in the translocation of protons across the membrane
IJBIPKIF_00599 1.84e-146 upp 2.4.2.9 - F ko:K00761 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko01000 Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
IJBIPKIF_00600 4.93e-243 ywlC 2.7.7.87 - J ko:K07566 - ko00000,ko01000,ko03009,ko03016 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
IJBIPKIF_00601 2.52e-202 prmC 2.1.1.297 - J ko:K02493 - ko00000,ko01000,ko03012 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
IJBIPKIF_00602 1.01e-235 prfA - - J ko:K02835 - ko00000,ko03012 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
IJBIPKIF_00603 4.64e-146 tdk 2.7.1.21 - F ko:K00857 ko00240,ko00983,ko01100,map00240,map00983,map01100 ko00000,ko00001,ko01000 thymidine kinase
IJBIPKIF_00604 0.0 murE2 6.3.2.13 - M ko:K01928 ko00300,ko00550,map00300,map00550 ko00000,ko00001,ko01000,ko01011 Domain of unknown function (DUF1727)
IJBIPKIF_00605 1.58e-266 - - - L - - - Belongs to the 'phage' integrase family
IJBIPKIF_00606 3.5e-75 - - - K - - - Transcriptional
IJBIPKIF_00608 2.58e-49 - - - - - - - -
IJBIPKIF_00609 3.84e-90 - - - - - - - -
IJBIPKIF_00610 6.8e-46 - - - - - - - -
IJBIPKIF_00611 1.18e-47 - - - - - - - -
IJBIPKIF_00612 0.0 - - - S ko:K06919 - ko00000 DNA primase
IJBIPKIF_00613 2.17e-85 - - - - - - - -
IJBIPKIF_00616 7.36e-251 ampC - - V - - - Beta-lactamase
IJBIPKIF_00617 5.4e-316 - - - EGP - - - Major Facilitator
IJBIPKIF_00618 0.0 pgi 5.3.1.9 - G ko:K01810 ko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the GPI family
IJBIPKIF_00619 1.93e-139 vanZ - - V - - - VanZ like family
IJBIPKIF_00620 0.0 ltaS 2.7.8.20 - M ko:K19005 ko00561,ko01100,map00561,map01100 ko00000,ko00001,ko01000 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
IJBIPKIF_00621 1.53e-159 XK27_00915 - - C - - - Luciferase-like monooxygenase
IJBIPKIF_00622 4.37e-81 XK27_00915 - - C - - - Luciferase-like monooxygenase
IJBIPKIF_00623 0.0 yclK - - T - - - Histidine kinase
IJBIPKIF_00624 1.97e-170 - - - K - - - Transcriptional regulatory protein, C terminal
IJBIPKIF_00625 1.68e-81 - - - S - - - SdpI/YhfL protein family
IJBIPKIF_00626 1.86e-245 manA 5.3.1.8 - G ko:K01809 ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 mannose-6-phosphate isomerase
IJBIPKIF_00627 4.53e-41 - 4.4.1.8 - E ko:K14155 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 ko00000,ko00001,ko01000,ko01007 Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
IJBIPKIF_00628 3.52e-224 patB 4.4.1.8 - E ko:K14155 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 ko00000,ko00001,ko01000,ko01007 Aminotransferase, class I
IJBIPKIF_00629 1.05e-170 - - - M - - - Protein of unknown function (DUF3737)
IJBIPKIF_00631 1.35e-284 ackA 2.7.2.1 - F ko:K00925 ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
IJBIPKIF_00632 4.19e-239 ytxK 2.1.1.72 - L ko:K00571 - ko00000,ko01000,ko02048 N-6 DNA Methylase
IJBIPKIF_00633 2.61e-120 - - - U ko:K02248 - ko00000,ko00002,ko02044 Putative Competence protein ComGF
IJBIPKIF_00634 1.33e-25 - - - - - - - -
IJBIPKIF_00635 9e-94 - - - - ko:K02246 - ko00000,ko00002,ko02044 -
IJBIPKIF_00636 1.55e-65 comGC - - U ko:K02245 - ko00000,ko00002,ko02044 competence protein ComGC
IJBIPKIF_00637 5.57e-224 comGB - - NU ko:K02244 - ko00000,ko00002,ko02044 type II secretion system
IJBIPKIF_00638 1.38e-228 comGA - - NU ko:K02243 - ko00000,ko00002,ko02044 Type II IV secretion system protein
IJBIPKIF_00639 1.97e-171 yebC - - K - - - Transcriptional regulatory protein
IJBIPKIF_00640 2.34e-119 - - - S - - - VanZ like family
IJBIPKIF_00641 1.96e-37 rpsN - - J ko:K02954 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
IJBIPKIF_00643 0.0 - - - E - - - Amino acid permease
IJBIPKIF_00644 6.14e-232 ybcH - - D ko:K06889 - ko00000 Alpha beta
IJBIPKIF_00645 0.0 - 3.2.1.86 GT1 G ko:K01223 ko00010,ko00500,map00010,map00500 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 1 family
IJBIPKIF_00646 0.0 pts33BCA - - G ko:K02755,ko:K02756,ko:K02757 ko02060,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 phosphotransferase system
IJBIPKIF_00647 4.66e-196 bglG5 - - K ko:K03488 - ko00000,ko03000 CAT RNA binding domain
IJBIPKIF_00648 1.37e-269 glxK 2.7.1.165 - G ko:K00865 ko00260,ko00561,ko00630,ko01100,ko01120,ko01130,map00260,map00561,map00630,map01100,map01120,map01130 ko00000,ko00001,ko01000 Belongs to the glycerate kinase type-1 family
IJBIPKIF_00649 2.73e-111 ptpA 3.1.3.48 - T ko:K01104 - ko00000,ko01000 Belongs to the low molecular weight phosphotyrosine protein phosphatase family
IJBIPKIF_00650 7.3e-156 - - - - - - - -
IJBIPKIF_00651 1.45e-187 - - - S - - - Sucrose-6F-phosphate phosphohydrolase
IJBIPKIF_00652 4.85e-191 - - - S - - - hydrolase
IJBIPKIF_00653 0.0 glmM 5.4.2.10 - G ko:K03431 ko00520,ko01100,ko01130,map00520,map01100,map01130 ko00000,ko00001,ko01000 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
IJBIPKIF_00654 3.38e-221 ybbR - - S - - - YbbR-like protein
IJBIPKIF_00655 1.06e-194 dacA 2.7.7.85 - S ko:K18672 - ko00000,ko01000 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
IJBIPKIF_00656 9.5e-264 potD - - P ko:K11069 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter
IJBIPKIF_00657 2.65e-179 potC - - P ko:K11070 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter permease
IJBIPKIF_00658 1.04e-180 potB - - P ko:K11071 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter permease
IJBIPKIF_00659 2.94e-262 potA 3.6.3.30, 3.6.3.31 - P ko:K02010,ko:K11072 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
IJBIPKIF_00660 7.27e-211 murB 1.3.1.98 - M ko:K00075 ko00520,ko00550,ko01100,map00520,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Cell wall formation
IJBIPKIF_00661 5.26e-128 dnaQ 2.7.7.7 - L ko:K02342 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase III
IJBIPKIF_00662 4.82e-113 ydiB - - O ko:K06925 - ko00000,ko03016 Hydrolase, P-loop family
IJBIPKIF_00663 3.84e-233 pta 2.3.1.8, 3.6.3.21 - C ko:K00625,ko:K02028 ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000,ko02000 phosphate acetyltransferase
IJBIPKIF_00664 1.15e-174 ung 3.2.2.27 - L ko:K03648 ko03410,ko05340,map03410,map05340 ko00000,ko00001,ko01000,ko03400 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
IJBIPKIF_00665 1.02e-202 ycsE - - S - - - Sucrose-6F-phosphate phosphohydrolase
IJBIPKIF_00666 1.07e-125 - - - - - - - -
IJBIPKIF_00667 2.71e-183 tpiA 5.3.1.1 - G ko:K01803 ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko04147 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
IJBIPKIF_00668 9.96e-287 pgk 2.7.2.3 - F ko:K00927 ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the phosphoglycerate kinase family
IJBIPKIF_00669 4.74e-243 gap 1.2.1.12 - G ko:K00134 ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
IJBIPKIF_00670 5.75e-242 cggR - - K ko:K05311 - ko00000,ko03000 Putative sugar-binding domain
IJBIPKIF_00672 0.0 ycaM - - E - - - amino acid
IJBIPKIF_00673 0.0 - - - S - - - SH3-like domain
IJBIPKIF_00674 2.16e-129 clpP 3.4.21.92 - O ko:K01358 ko04112,ko04212,map04112,map04212 ko00000,ko00001,ko01000,ko01002 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
IJBIPKIF_00675 1.17e-218 whiA - - K ko:K09762 - ko00000 May be required for sporulation
IJBIPKIF_00676 3.24e-250 yvcK - - S - - - Required for morphogenesis under gluconeogenic growth conditions
IJBIPKIF_00677 6e-212 yvcJ - - S ko:K06958 - ko00000,ko03019 Displays ATPase and GTPase activities
IJBIPKIF_00678 3.8e-118 - - - S - - - Short repeat of unknown function (DUF308)
IJBIPKIF_00679 0.0 uvrA - - L ko:K03701 ko03420,map03420 ko00000,ko00001,ko03400 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
IJBIPKIF_00680 0.0 uvrB - - L ko:K03702 ko03420,map03420 ko00000,ko00001,ko03400 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
IJBIPKIF_00681 0.0 pgm 5.4.2.2 - G ko:K01835 ko00010,ko00030,ko00052,ko00230,ko00500,ko00520,ko00521,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00052,map00230,map00500,map00520,map00521,map01100,map01110,map01120,map01130 ko00000,ko00001,ko00002,ko01000 Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
IJBIPKIF_00682 0.0 malZ 3.2.1.20, 3.2.1.41 CBM48,GH13,GH31 G ko:K01187,ko:K01200 ko00052,ko00500,ko01100,ko01110,map00052,map00500,map01100,map01110 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 13 family
IJBIPKIF_00683 0.0 glgP 2.4.1.1 GT35 G ko:K00688 ko00500,ko01100,ko01110,ko02026,ko04217,ko04910,ko04922,ko04931,map00500,map01100,map01110,map02026,map04217,map04910,map04922,map04931 ko00000,ko00001,ko01000 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
IJBIPKIF_00684 0.0 glgA 2.4.1.21 GT5 F ko:K00703 ko00500,ko01100,ko01110,ko02026,map00500,map01100,map01110,map02026 ko00000,ko00001,ko00002,ko01000,ko01003 Synthesizes alpha-1,4-glucan chains using ADP-glucose
IJBIPKIF_00685 5.82e-272 glgD 2.7.7.27 - G ko:K00975 ko00500,ko00520,ko01100,ko01110,ko02026,map00500,map00520,map01100,map01110,map02026 ko00000,ko00001,ko00002,ko01000 Nucleotidyl transferase
IJBIPKIF_00686 4.02e-284 glgC 2.7.7.27 - H ko:K00975 ko00500,ko00520,ko01100,ko01110,ko02026,map00500,map00520,map01100,map01110,map02026 ko00000,ko00001,ko00002,ko01000 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
IJBIPKIF_00687 0.0 glgB 2.4.1.18 CBM48,GH13 G ko:K00700 ko00500,ko01100,ko01110,map00500,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko04147 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
IJBIPKIF_00688 9.38e-228 trxB 1.8.1.9 - C ko:K00384 ko00450,map00450 ko00000,ko00001,ko01000 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
IJBIPKIF_00689 1.71e-241 gpsA 1.1.1.94 - I ko:K00057 ko00564,ko01110,map00564,map01110 ko00000,ko00001,ko01000 Glycerol-3-phosphate dehydrogenase
IJBIPKIF_00690 4.36e-205 lgt - - M ko:K13292 - ko00000,ko01000 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
IJBIPKIF_00691 6.85e-228 hprK - - F ko:K06023 - ko00000,ko01000 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
IJBIPKIF_00692 1.88e-21 - - - - - - - -
IJBIPKIF_00693 6.43e-238 prfB - - J ko:K02836 - ko00000,ko03012 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
IJBIPKIF_00694 0.0 secA - - U ko:K03070 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
IJBIPKIF_00695 1.75e-123 hpf - - J ko:K05808 - ko00000,ko03009 Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
IJBIPKIF_00696 7.21e-173 comFC - - S ko:K02242 - ko00000,ko00002,ko02044 Competence protein
IJBIPKIF_00697 8.33e-314 comFA - - L ko:K02240 - ko00000,ko00002,ko02044 Helicase C-terminal domain protein
IJBIPKIF_00698 2.05e-153 yvyE 3.4.13.9 - S ko:K01271 - ko00000,ko01000,ko01002 YigZ family
IJBIPKIF_00699 3.37e-271 tagO 2.7.8.33, 2.7.8.35 - M ko:K02851 - ko00000,ko01000,ko01003,ko01005 transferase
IJBIPKIF_00700 1.29e-293 rny - - S ko:K18682 ko03018,map03018 ko00000,ko00001,ko01000,ko03019 Endoribonuclease that initiates mRNA decay
IJBIPKIF_00701 6.24e-247 recA - - L ko:K03553 ko03440,map03440 ko00000,ko00001,ko00002,ko03400 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
IJBIPKIF_00702 1.73e-126 pgsA 2.7.8.5 - I ko:K00995 ko00564,ko01100,map00564,map01100 ko00000,ko00001,ko01000 Belongs to the CDP-alcohol phosphatidyltransferase class-I family
IJBIPKIF_00703 1.43e-160 ymfM - - S ko:K15539 - ko00000 Helix-turn-helix domain
IJBIPKIF_00704 8.02e-171 fabG 1.1.1.100 - IQ ko:K00059 ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 Enoyl-(Acyl carrier protein) reductase
IJBIPKIF_00705 2.26e-306 ymfH - - S - - - Peptidase M16
IJBIPKIF_00706 4.09e-291 ymfF - - S - - - Peptidase M16 inactive domain protein
IJBIPKIF_00707 0.0 ftsK - - D ko:K03466 - ko00000,ko03036 Belongs to the FtsK SpoIIIE SftA family
IJBIPKIF_00708 1.28e-89 - - - S - - - Protein of unknown function (DUF1149)
IJBIPKIF_00709 1.75e-134 cspR 2.1.1.207 - J ko:K03216 - ko00000,ko01000,ko03016 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
IJBIPKIF_00710 8.9e-270 XK27_05220 - - S - - - AI-2E family transporter
IJBIPKIF_00711 8.1e-87 srlB 2.7.1.198 - G ko:K02781 ko00051,ko02060,map00051,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system glucitol/sorbitol-specific IIA component
IJBIPKIF_00712 0.0 pacL - - P - - - Cation transporter/ATPase, N-terminus
IJBIPKIF_00713 1.06e-257 pgl 3.1.1.31 - G ko:K07404 ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Lactonase, 7-bladed beta-propeller
IJBIPKIF_00714 8.93e-153 - - - S - - - SNARE associated Golgi protein
IJBIPKIF_00715 0.0 mycA 4.2.1.53 - S ko:K10254 - ko00000,ko01000 Myosin-crossreactive antigen
IJBIPKIF_00716 1.81e-221 rluD2 5.4.99.23 - J ko:K06180 - ko00000,ko01000,ko03009 Responsible for synthesis of pseudouridine from uracil
IJBIPKIF_00717 5.49e-195 nadK 2.7.1.23 - F ko:K00858 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko01000 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
IJBIPKIF_00718 1.15e-145 yjbM 2.7.6.5 - S ko:K07816 ko00230,map00230 ko00000,ko00001,ko01000 RelA SpoT domain protein
IJBIPKIF_00719 1.46e-145 - - - S - - - CYTH
IJBIPKIF_00720 7.54e-149 yjbH - - Q - - - Thioredoxin
IJBIPKIF_00721 2.56e-209 coiA - - S ko:K06198 - ko00000 Competence protein
IJBIPKIF_00722 2.91e-175 mecA - - NOT ko:K16511 - ko00000 Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
IJBIPKIF_00723 1.08e-87 spxA - - K ko:K16509 - ko00000 Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
IJBIPKIF_00724 0.0 ptsI 2.7.3.9 - G ko:K08483 ko02060,map02060 ko00000,ko00001,ko01000,ko02000 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
IJBIPKIF_00725 9.05e-55 ptsH - - G ko:K11189 - ko00000,ko02000 phosphocarrier protein HPR
IJBIPKIF_00726 0.0 clpE - - O ko:K03697 - ko00000,ko03110 Belongs to the ClpA ClpB family
IJBIPKIF_00727 3.43e-59 XK27_09445 - - S - - - Domain of unknown function (DUF1827)
IJBIPKIF_00728 0.0 prfC - - J ko:K02837 - ko00000,ko03012 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
IJBIPKIF_00729 1.24e-201 hlyX - - S ko:K03699 - ko00000,ko02042 Transporter associated domain
IJBIPKIF_00730 1.02e-93 - - - - - - - -
IJBIPKIF_00731 7.42e-112 - - - - - - - -
IJBIPKIF_00732 4.13e-187 recX - - S ko:K03565 - ko00000,ko03400 Regulatory protein RecX
IJBIPKIF_00733 0.0 rumA_1 2.1.1.190, 2.1.1.35 - J ko:K00557,ko:K03215 - ko00000,ko01000,ko03009,ko03016 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
IJBIPKIF_00734 2.13e-227 ybcH - - D ko:K06889 - ko00000 Alpha beta
IJBIPKIF_00735 2.95e-61 - - - - - - - -
IJBIPKIF_00736 3.82e-276 mvaS 2.3.3.10 - I ko:K01641 ko00072,ko00280,ko00650,ko00900,ko01100,ko01110,ko01130,map00072,map00280,map00650,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Hydroxymethylglutaryl-CoA synthase
IJBIPKIF_00737 3.42e-278 mvaA 1.1.1.88, 2.3.1.9 - C ko:K00054,ko:K00626 ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the HMG-CoA reductase family
IJBIPKIF_00738 3.81e-275 atoB 1.1.1.88, 2.3.1.9 - I ko:K00054,ko:K00626 ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the thiolase family
IJBIPKIF_00739 6.78e-217 galU 2.7.7.9 - M ko:K00963 ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130 ko00000,ko00001,ko00002,ko01000 UTP-glucose-1-phosphate uridylyltransferase
IJBIPKIF_00740 1.14e-203 rbn - - S ko:K07058 - ko00000 Belongs to the UPF0761 family
IJBIPKIF_00741 7.02e-211 map 3.4.11.18 - E ko:K01265 - ko00000,ko01000,ko01002 Methionine Aminopeptidase
IJBIPKIF_00742 8.53e-104 ykuP - - C ko:K03839 - ko00000 Flavodoxin
IJBIPKIF_00743 4.67e-116 gtcA1 - - S - - - Teichoic acid glycosylation protein
IJBIPKIF_00744 4.05e-112 mnaA 5.1.3.14 - G ko:K01791 ko00520,ko01100,ko05111,map00520,map01100,map05111 ko00000,ko00001,ko00002,ko01000,ko01005 Belongs to the UDP-N-acetylglucosamine 2-epimerase family
IJBIPKIF_00745 0.0 lacL 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 2 family
IJBIPKIF_00746 8.15e-242 lacM 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 beta-galactosidase
IJBIPKIF_00747 1.79e-243 galE 5.1.3.2 - M ko:K01784 ko00052,ko00520,ko01100,map00052,map00520,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the NAD(P)-dependent epimerase dehydratase family
IJBIPKIF_00748 0.0 - - - S - - - Domain of unknown function (DUF5060)
IJBIPKIF_00749 1.05e-274 - - - EGP - - - Transporter, major facilitator family protein
IJBIPKIF_00750 2.88e-223 rbsR - - K ko:K02529 - ko00000,ko03000 helix_turn _helix lactose operon repressor
IJBIPKIF_00751 0.0 - 3.2.1.40 - G ko:K05989 - ko00000,ko01000 Alpha-L-rhamnosidase N-terminal domain
IJBIPKIF_00752 2e-79 - - - G - - - polysaccharide catabolic process
IJBIPKIF_00753 0.0 serS 6.1.1.11 - J ko:K01875 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
IJBIPKIF_00754 1.28e-131 yjcK 2.3.1.128 - J ko:K03790 - ko00000,ko01000,ko03009 Acetyltransferase (GNAT) domain
IJBIPKIF_00755 1.47e-144 - - - S - - - SNARE associated Golgi protein
IJBIPKIF_00756 1.84e-196 - - - I - - - alpha/beta hydrolase fold
IJBIPKIF_00757 4.92e-207 plcR - - K ko:K20480 ko02024,map02024 ko00000,ko00001,ko03000 Helix-turn-helix
IJBIPKIF_00758 3.62e-121 - - - F - - - Nucleoside 2-deoxyribosyltransferase
IJBIPKIF_00759 0.0 gabD 1.2.1.16, 1.2.1.20, 1.2.1.79 - C ko:K00135 ko00250,ko00310,ko00350,ko00650,ko00760,ko01100,ko01120,map00250,map00310,map00350,map00650,map00760,map01100,map01120 ko00000,ko00001,ko00002,ko01000 Belongs to the aldehyde dehydrogenase family
IJBIPKIF_00767 5.88e-312 chbC - - G ko:K02761 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko02000 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
IJBIPKIF_00768 2.35e-269 yfmL - - L - - - DEAD DEAH box helicase
IJBIPKIF_00769 9.79e-168 lys - - M ko:K07273 - ko00000 Glycosyl hydrolases family 25
IJBIPKIF_00770 3.27e-294 - - - E ko:K03294 - ko00000 amino acid
IJBIPKIF_00772 9.93e-210 - - - M - - - Rib/alpha-like repeat
IJBIPKIF_00773 1.19e-107 - - - S - - - COG NOG38524 non supervised orthologous group
IJBIPKIF_00774 2.3e-229 - - - - - - - -
IJBIPKIF_00775 0.0 icaA - - M - - - Glycosyl transferase family group 2
IJBIPKIF_00776 4.97e-81 - 4.1.2.50, 4.2.3.12 - H ko:K01737 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko00002,ko01000,ko03016 6-pyruvoyl tetrahydropterin synthase
IJBIPKIF_00778 1.31e-211 galU 2.7.7.9 - M ko:K00963 ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130 ko00000,ko00001,ko00002,ko01000 UTP-glucose-1-phosphate uridylyltransferase
IJBIPKIF_00780 4.48e-161 rnc 3.1.26.3 - J ko:K03685 ko03008,ko05205,map03008,map05205 ko00000,ko00001,ko01000,ko03009,ko03019,ko03036 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
IJBIPKIF_00781 0.0 smc - - D ko:K03529 - ko00000,ko03036 Required for chromosome condensation and partitioning
IJBIPKIF_00782 1.12e-228 ftsY - - U ko:K03110 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
IJBIPKIF_00783 0.0 pepD2 - - E ko:K08659 - ko00000,ko01000,ko01002 Dipeptidase
IJBIPKIF_00784 1.16e-88 - - - - - - - -
IJBIPKIF_00785 0.0 ctrA - - E ko:K03294 - ko00000 amino acid
IJBIPKIF_00786 3.35e-73 ylxM - - S ko:K09787 - ko00000 Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
IJBIPKIF_00787 1.9e-289 ffh 3.6.5.4 - U ko:K03106 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko01000,ko02044 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
IJBIPKIF_00788 6.78e-60 rpsP - - J ko:K02959 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011,ko03029 Belongs to the bacterial ribosomal protein bS16 family
IJBIPKIF_00789 1.07e-124 rimM - - J ko:K02860 - ko00000,ko03009 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
IJBIPKIF_00790 5.01e-164 trmD 2.1.1.228 - J ko:K00554 - ko00000,ko01000,ko03016 Belongs to the RNA methyltransferase TrmD family
IJBIPKIF_00791 2.28e-74 rplS - - J ko:K02884 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
IJBIPKIF_00792 3.52e-91 - - - S - - - GtrA-like protein
IJBIPKIF_00793 0.0 - - - S - - - Bacterial membrane protein, YfhO
IJBIPKIF_00794 2.58e-226 yfdH - GT2 M ko:K12999 - ko00000,ko01000,ko01003,ko01005 Glycosyltransferase, group 2 family protein
IJBIPKIF_00795 1.19e-156 ung2 3.2.2.27 - L ko:K21929 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 Uracil-DNA glycosylase
IJBIPKIF_00796 1.4e-185 - - - E - - - GDSL-like Lipase/Acylhydrolase family
IJBIPKIF_00797 2.83e-145 lexA 3.4.21.88 - K ko:K01356 - ko00000,ko00002,ko01000,ko01002,ko03400 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
IJBIPKIF_00798 2.97e-50 ynzC - - S - - - UPF0291 protein
IJBIPKIF_00799 3.18e-41 XK26_06720 - - S ko:K09976 - ko00000 Uncharacterised protein family (UPF0154)
IJBIPKIF_00800 0.0 mdlA - - V ko:K06148,ko:K18889 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter
IJBIPKIF_00801 0.0 mdlB - - V ko:K06147,ko:K18890 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter
IJBIPKIF_00802 0.0 pepO - - O ko:K07386 - ko00000,ko01000,ko01002 Peptidase family M13
IJBIPKIF_00803 9.32e-296 cfa 2.1.1.79 - M ko:K00574 - ko00000,ko01000 cyclopropane-fatty-acyl-phospholipid synthase
IJBIPKIF_00804 1.59e-149 plsC 2.3.1.51 - I ko:K00655 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko01004 Acyltransferase
IJBIPKIF_00805 6.34e-255 yabB 2.1.1.223 - L ko:K07461,ko:K15460 - ko00000,ko01000,ko03016 Methyltransferase small domain
IJBIPKIF_00806 2.05e-181 rpsB - - J ko:K02967 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the universal ribosomal protein uS2 family
IJBIPKIF_00807 1.45e-234 tsf - - J ko:K02357 - ko00000,ko03012,ko03029 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
IJBIPKIF_00808 7.13e-169 pyrH 2.7.4.22 - F ko:K09903 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko01000 Catalyzes the reversible phosphorylation of UMP to UDP
IJBIPKIF_00809 2.53e-114 frr - - J ko:K02838 - ko00000,ko03012 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
IJBIPKIF_00810 2.23e-178 uppS 2.5.1.31 - H ko:K00806 ko00900,ko01110,map00900,map01110 ko00000,ko00001,ko01000,ko01006 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
IJBIPKIF_00811 1.89e-188 cdsA 2.7.7.41 - I ko:K00981 ko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070 ko00000,ko00001,ko00002,ko01000 Belongs to the CDS family
IJBIPKIF_00812 1.35e-255 rseP - - M ko:K11749 ko02024,ko04112,map02024,map04112 ko00000,ko00001,ko01000,ko01002 zinc metalloprotease
IJBIPKIF_00813 0.0 proS 6.1.1.15 - J ko:K01881 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
IJBIPKIF_00814 0.0 polC 2.7.7.7 - L ko:K03763 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
IJBIPKIF_00815 2.39e-108 rimP - - J ko:K09748 - ko00000,ko03009 Required for maturation of 30S ribosomal subunits
IJBIPKIF_00816 3.76e-268 nusA - - K ko:K02600 - ko00000,ko03009,ko03021 Participates in both transcription termination and antitermination
IJBIPKIF_00817 6.47e-64 ylxR - - K ko:K07742 - ko00000 Protein of unknown function (DUF448)
IJBIPKIF_00818 3.95e-65 ylxQ - - J - - - ribosomal protein
IJBIPKIF_00819 0.0 infB - - J ko:K02519 - ko00000,ko03012,ko03029 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
IJBIPKIF_00820 9.65e-79 rbfA - - J ko:K02834 - ko00000,ko03009 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
IJBIPKIF_00821 8.54e-214 truB 5.4.99.25 - J ko:K03177,ko:K03483 - ko00000,ko01000,ko03000,ko03016 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
IJBIPKIF_00822 2.49e-228 ribF 2.7.1.26, 2.7.7.2 - H ko:K11753 ko00740,ko01100,ko01110,map00740,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Belongs to the ribF family
IJBIPKIF_00823 0.0 yjcA - - S ko:K19350 ko02010,map02010 ko00000,ko00001,ko01504,ko02000 ABC transporter
IJBIPKIF_00824 2.1e-247 hrcA - - K ko:K03705 - ko00000,ko03000 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
IJBIPKIF_00825 7.55e-109 grpE - - O ko:K03687 - ko00000,ko03029,ko03110 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
IJBIPKIF_00826 0.0 dnaK - - O ko:K04043 ko03018,ko04212,ko05152,map03018,map04212,map05152 ko00000,ko00001,ko03019,ko03029,ko03110,ko04147 Heat shock 70 kDa protein
IJBIPKIF_00827 5.85e-274 dnaJ - - O ko:K03686 - ko00000,ko03029,ko03110 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
IJBIPKIF_00828 0.0 lepA - - M ko:K03596 ko05134,map05134 ko00000,ko00001 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
IJBIPKIF_00829 6.07e-155 srtA 3.4.22.70 - M ko:K07284 - ko00000,ko01000,ko01002,ko01011 sortase family
IJBIPKIF_00830 0.0 recJ - - L ko:K07462 ko03410,ko03430,ko03440,map03410,map03430,map03440 ko00000,ko00001,ko01000,ko03400 Single-stranded-DNA-specific exonuclease RecJ
IJBIPKIF_00831 2.41e-123 apt 2.4.2.7 - F ko:K00759 ko00230,ko01100,map00230,map01100 ko00000,ko00001,ko01000,ko04147 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
IJBIPKIF_00832 7.02e-103 - - - K - - - Acetyltransferase (GNAT) domain
IJBIPKIF_00834 6.15e-194 citG 2.4.2.52 - H ko:K05966 ko02020,map02020 ko00000,ko00001,ko01000 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase
IJBIPKIF_00835 1.72e-269 - - - S ko:K09963 - ko00000 Bacterial protein of unknown function (DUF871)
IJBIPKIF_00836 1.73e-219 cysK 2.5.1.47 - E ko:K01738 ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the cysteine synthase cystathionine beta- synthase family
IJBIPKIF_00837 4.53e-196 metA 2.3.1.46 - E ko:K00651 ko00270,ko00920,ko01100,ko01110,ko01230,map00270,map00920,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Transfers an acetyl group from acetyl-CoA to
IJBIPKIF_00838 0.0 cls - - I ko:K06131 ko00564,ko01100,map00564,map01100 ko00000,ko00001,ko01000 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
IJBIPKIF_00839 1.19e-113 - 3.4.21.96 - S ko:K01361 - ko00000,ko01000,ko01002,ko03110 SLAP domain
IJBIPKIF_00840 0.0 - - - P - - - Cation transporter/ATPase, N-terminus
IJBIPKIF_00841 3.72e-201 lysR5 - - K - - - LysR substrate binding domain
IJBIPKIF_00842 3.83e-127 citX 2.7.7.61 - HI ko:K05964 ko02020,map02020 ko00000,ko00001,ko01000 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase
IJBIPKIF_00843 3.35e-291 - - - S - - - Sterol carrier protein domain
IJBIPKIF_00844 8.62e-22 - - - - - - - -
IJBIPKIF_00845 1.82e-139 - - - K - - - LysR substrate binding domain
IJBIPKIF_00846 8.29e-129 - - - - - - - -
IJBIPKIF_00847 3.69e-157 - - - G - - - Antibiotic biosynthesis monooxygenase
IJBIPKIF_00848 0.0 - - - - - - - -
IJBIPKIF_00849 5.4e-282 brnQ - - U ko:K03311 - ko00000 Component of the transport system for branched-chain amino acids
IJBIPKIF_00850 0.0 - 1.8.1.7 - C ko:K00383,ko:K21739 ko00480,ko04918,map00480,map04918 ko00000,ko00001,ko01000 Pyridine nucleotide-disulfide oxidoreductase
IJBIPKIF_00851 2.86e-05 - - - M - - - Leucine-rich repeat (LRR) protein
IJBIPKIF_00852 0.0 - - - - ko:K14201 ko05150,map05150 ko00000,ko00001 -
IJBIPKIF_00853 1.92e-141 maa3 2.3.1.79 - S ko:K00661 - ko00000,ko01000 transferase hexapeptide repeat
IJBIPKIF_00854 3.65e-28 - - - S - - - Bacterial protein of unknown function (DUF898)
IJBIPKIF_00855 0.0 oppA - - E ko:K02035,ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 Bacterial extracellular solute-binding proteins, family 5 Middle
IJBIPKIF_00856 0.0 lysC 2.7.2.4 - E ko:K00928 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the aspartokinase family
IJBIPKIF_00857 0.0 thrC 4.2.3.1 - E ko:K01733 ko00260,ko00750,ko01100,ko01110,ko01120,ko01230,map00260,map00750,map01100,map01110,map01120,map01230 ko00000,ko00001,ko00002,ko01000 Threonine synthase
IJBIPKIF_00858 1.58e-282 hom 1.1.1.3 - E ko:K00003 ko00260,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00270,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 homoserine dehydrogenase
IJBIPKIF_00859 4.04e-207 thrB 2.7.1.39 - F ko:K00872 ko00260,ko01100,ko01110,ko01120,ko01230,map00260,map01100,map01110,map01120,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
IJBIPKIF_00860 1.4e-157 - - - - - - - -
IJBIPKIF_00861 2.17e-209 yitT - - S - - - Uncharacterised 5xTM membrane BCR, YitT family COG1284
IJBIPKIF_00862 6.31e-144 msrA 1.8.4.11, 1.8.4.12 - O ko:K07304,ko:K12267 - ko00000,ko01000 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
IJBIPKIF_00863 3.22e-133 - - - S - - - Peptidase family M23
IJBIPKIF_00864 4.68e-197 yqfL 2.7.11.33, 2.7.4.28 - F ko:K09773 - ko00000,ko01000 Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
IJBIPKIF_00865 4.83e-30 rpsU - - J ko:K02970 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bS21 family
IJBIPKIF_00866 4.38e-92 yqeY - - S ko:K09117 - ko00000 YqeY-like protein
IJBIPKIF_00867 1.82e-226 phoH - - T ko:K06217 - ko00000 phosphate starvation-inducible protein PhoH
IJBIPKIF_00868 3.58e-129 ybeY - - S ko:K07042 - ko00000,ko03009 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
IJBIPKIF_00869 6.28e-218 era - - S ko:K03595 - ko00000,ko03009,ko03029 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
IJBIPKIF_00870 5.41e-173 recO - - L ko:K03584 ko03440,map03440 ko00000,ko00001,ko03400 Involved in DNA repair and RecF pathway recombination
IJBIPKIF_00871 1.05e-227 glyQ 6.1.1.14 - J ko:K01878 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 glycyl-tRNA synthetase alpha subunit
IJBIPKIF_00872 0.0 glyS 6.1.1.14 - J ko:K01879 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Glycyl-tRNA synthetase beta subunit
IJBIPKIF_00873 0.0 dnaG - - L ko:K02316 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
IJBIPKIF_00874 3.01e-253 sigA - - K ko:K03086 - ko00000,ko03021 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
IJBIPKIF_00875 2.24e-162 - - - S - - - Peptidase family M23
IJBIPKIF_00876 1.87e-106 - 3.6.1.55 - F ko:K03574 - ko00000,ko01000,ko03400 NUDIX domain
IJBIPKIF_00877 4.48e-161 trmK 2.1.1.217 - S ko:K06967 - ko00000,ko01000,ko03016 SAM-dependent methyltransferase
IJBIPKIF_00878 3.45e-197 yqfO - - S - - - Belongs to the GTP cyclohydrolase I type 2 NIF3 family
IJBIPKIF_00879 7.64e-313 pepT 3.4.11.4 - E ko:K01258 - ko00000,ko01000,ko01002 Cleaves the N-terminal amino acid of tripeptides
IJBIPKIF_00880 1.25e-80 lexA - - K ko:K07979 - ko00000,ko03000 Transcriptional regulator, GntR family
IJBIPKIF_00881 1.09e-160 - - - V ko:K01990 - ko00000,ko00002,ko02000 ATPases associated with a variety of cellular activities
IJBIPKIF_00882 1.51e-174 - - - - - - - -
IJBIPKIF_00883 2.03e-186 - - - - - - - -
IJBIPKIF_00884 3.64e-175 - - - - - - - -
IJBIPKIF_00885 1.04e-37 - - - - - - - -
IJBIPKIF_00886 1.72e-123 lepB 3.4.21.89 - U ko:K03100 ko02024,ko03060,map02024,map03060 ko00000,ko00001,ko01000,ko01002 Belongs to the peptidase S26 family
IJBIPKIF_00887 1.57e-181 - - - - - - - -
IJBIPKIF_00888 1.05e-228 - - - - - - - -
IJBIPKIF_00889 0.0 rsmF - - J - - - NOL1 NOP2 sun family protein
IJBIPKIF_00890 1.14e-275 iscS 2.8.1.7 - E ko:K04487 ko00730,ko01100,ko04122,map00730,map01100,map04122 ko00000,ko00001,ko01000,ko02048,ko03016,ko03029 Aminotransferase class V
IJBIPKIF_00891 2.04e-73 XK27_10475 - - S - - - Oxidoreductase family, NAD-binding Rossmann fold
IJBIPKIF_00892 1.18e-140 XK27_10475 - - S - - - Oxidoreductase family, NAD-binding Rossmann fold
IJBIPKIF_00893 1.01e-187 - - - K - - - SIS domain
IJBIPKIF_00894 2.09e-242 fni 5.3.3.2 - C ko:K01823 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
IJBIPKIF_00895 1.64e-261 mvaK2 2.7.4.2 - I ko:K00938 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 phosphomevalonate kinase
IJBIPKIF_00896 3.39e-227 mvaD 4.1.1.33 - I ko:K01597 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 diphosphomevalonate decarboxylase
IJBIPKIF_00897 6.78e-218 mvk 2.7.1.36 - I ko:K00869 ko00900,ko01100,ko01110,ko01130,ko04146,map00900,map01100,map01110,map01130,map04146 ko00000,ko00001,ko00002,ko01000 GHMP kinases N terminal domain
IJBIPKIF_00898 0.0 rexB 3.6.4.12 - L ko:K16899 - ko00000,ko01000,ko03400 The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
IJBIPKIF_00899 0.0 addA 3.6.4.12 - L ko:K16898 - ko00000,ko01000,ko03400 ATP-dependent helicase nuclease subunit A
IJBIPKIF_00900 0.0 dinG 3.6.4.12 - L ko:K03722 - ko00000,ko01000,ko03400 helicase involved in DNA repair and perhaps also replication
IJBIPKIF_00901 8.23e-117 ypmB - - S - - - Protein conserved in bacteria
IJBIPKIF_00902 0.0 asnS 6.1.1.22 - J ko:K01893 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Asparaginyl-tRNA synthetase
IJBIPKIF_00903 1.39e-148 dnaD - - L ko:K02086 - ko00000 DnaD domain protein
IJBIPKIF_00904 4.71e-149 nth 4.2.99.18 - L ko:K10773 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
IJBIPKIF_00905 0.0 ponA 2.4.1.129, 3.4.16.4 GT51 M ko:K05366 ko00550,ko01100,ko01501,map00550,map01100,map01501 ko00000,ko00001,ko01000,ko01003,ko01011 penicillin-binding protein 1A
IJBIPKIF_00906 1.99e-151 recU - - L ko:K03700 - ko00000,ko03400 Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
IJBIPKIF_00907 1.61e-136 ypsA - - S - - - Belongs to the UPF0398 family
IJBIPKIF_00908 2.83e-90 gpsB - - D - - - Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
IJBIPKIF_00909 2.39e-277 ypsC - - L ko:K07444 - ko00000,ko01000 Belongs to the methyltransferase superfamily
IJBIPKIF_00910 2.01e-310 cpdA - - S - - - Calcineurin-like phosphoesterase
IJBIPKIF_00911 0.0 fhs 6.3.4.3 - F ko:K01938 ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Belongs to the formate--tetrahydrofolate ligase family
IJBIPKIF_00912 6.23e-113 lspA 3.4.23.36 - MU ko:K03101 ko03060,map03060 ko00000,ko00001,ko01000,ko01002 This protein specifically catalyzes the removal of signal peptides from prolipoproteins
IJBIPKIF_00913 2.88e-219 rluD 5.4.99.23 - J ko:K06180 - ko00000,ko01000,ko03009 Responsible for synthesis of pseudouridine from uracil
IJBIPKIF_00914 2.05e-255 carA 6.3.5.5 - F ko:K01956 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Carbamoyl-phosphate synthetase glutamine chain
IJBIPKIF_00915 0.0 carB1 6.3.5.5 - F ko:K01955 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Carbamoyl-phosphate synthase
IJBIPKIF_00916 0.0 FbpA - - K - - - Fibronectin-binding protein
IJBIPKIF_00917 2.95e-87 - - - - - - - -
IJBIPKIF_00918 6.18e-205 - - - S - - - EDD domain protein, DegV family
IJBIPKIF_00919 5.95e-250 xerS - - L ko:K03733 - ko00000,ko03036 Belongs to the 'phage' integrase family
IJBIPKIF_00920 1.03e-100 - - - - - - - -
IJBIPKIF_00921 1.27e-119 flaR - - F - - - topology modulation protein
IJBIPKIF_00922 2.62e-138 XK27_00160 - - S - - - Domain of unknown function (DUF5052)
IJBIPKIF_00923 2.71e-256 - - - M ko:K07273 - ko00000 Glycosyl hydrolases family 25
IJBIPKIF_00924 3.43e-07 azoR - - C ko:K01118 - ko00000,ko01000 Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
IJBIPKIF_00925 3.92e-76 azoR - - C ko:K01118 - ko00000,ko01000 Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
IJBIPKIF_00926 1.06e-110 rmaD - - K - - - transcriptional
IJBIPKIF_00927 1.74e-272 - - - EGP - - - Transmembrane secretion effector
IJBIPKIF_00928 0.0 - - - V ko:K06148 - ko00000,ko02000 ABC-type multidrug transport system, ATPase and permease components
IJBIPKIF_00929 2.69e-93 - - - V ko:K06148 - ko00000,ko02000 ABC-type multidrug transport system, ATPase and permease components
IJBIPKIF_00930 2.5e-156 - - - V ko:K06148 - ko00000,ko02000 ABC-type multidrug transport system, ATPase and permease components
IJBIPKIF_00932 3.46e-87 fic - - D ko:K04095 - ko00000,ko03036 Fic/DOC family
IJBIPKIF_00933 4.78e-165 - - - S - - - Protein of unknown function (DUF1275)
IJBIPKIF_00934 9.73e-55 - - - K - - - Helix-turn-helix domain
IJBIPKIF_00935 7.02e-146 ppiB 5.2.1.8 - G ko:K03768 - ko00000,ko01000,ko03110 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
IJBIPKIF_00936 3.65e-222 ppaC 3.6.1.1 - C ko:K15986 ko00190,map00190 ko00000,ko00001,ko01000 inorganic pyrophosphatase
IJBIPKIF_00937 3.72e-237 - - - K - - - Transcriptional regulator
IJBIPKIF_00938 0.0 parC - - L ko:K02621 - ko00000,ko01000,ko02048,ko03032,ko03036 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
IJBIPKIF_00939 0.0 parE - - L ko:K02622 - ko00000,ko01000,ko02048,ko03032,ko03036 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
IJBIPKIF_00940 1.9e-140 plsY 2.3.1.15 - I ko:K08591 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko01004 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
IJBIPKIF_00941 1.17e-130 - - - - - - - -
IJBIPKIF_00942 8.53e-215 - - - S - - - Conserved hypothetical protein 698
IJBIPKIF_00943 1.43e-24 nth2 - - L ko:K07457 - ko00000 Base excision DNA repair protein, HhH-GPD family
IJBIPKIF_00944 4.13e-18 proC 1.5.1.2 - E ko:K00286 ko00330,ko01100,ko01110,ko01130,ko01230,map00330,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
IJBIPKIF_00945 6e-59 proC 1.5.1.2 - E ko:K00286 ko00330,ko01100,ko01110,ko01130,ko01230,map00330,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
IJBIPKIF_00946 1.37e-15 - - - S - - - Alpha beta hydrolase
IJBIPKIF_00947 0.0 yagE - - E - - - amino acid
IJBIPKIF_00949 2.54e-101 adh2 1.1.1.1 - E ko:K00001 ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220 ko00000,ko00001,ko01000 alcohol dehydrogenase
IJBIPKIF_00950 1.39e-190 - - - P - - - FAD-binding domain
IJBIPKIF_00951 3.1e-30 - - - C - - - Flavodoxin
IJBIPKIF_00952 7.38e-127 - - - S ko:K07038 - ko00000 LexA-binding, inner membrane-associated putative hydrolase
IJBIPKIF_00953 1.29e-182 - - - C - - - Flavodoxin
IJBIPKIF_00954 3.77e-32 - - - - - - - -
IJBIPKIF_00955 0.0 gshR3 1.8.1.7 - C ko:K00383 ko00480,ko04918,map00480,map04918 ko00000,ko00001,ko01000 Glutathione reductase
IJBIPKIF_00956 2.88e-130 - - - P - - - esterase
IJBIPKIF_00957 9.87e-139 - - - C - - - Flavodoxin
IJBIPKIF_00959 1.51e-24 - - - C - - - Flavodoxin
IJBIPKIF_00960 1.54e-187 - - - U ko:K05340 - ko00000,ko02000 ribose uptake protein RbsU
IJBIPKIF_00961 7.12e-80 - - - C - - - aldo keto reductase
IJBIPKIF_00962 1.16e-148 - - - C - - - Aldo/keto reductase family
IJBIPKIF_00963 3.78e-72 ywnH 2.3.1.183 - M ko:K03823 ko00440,ko01130,map00440,map01130 ko00000,ko00001,ko01000 Acetyltransferase (GNAT) domain
IJBIPKIF_00964 1.57e-187 gdh 1.1.1.47 - IQ ko:K00034 ko00030,ko01120,ko01200,map00030,map01120,map01200 ko00000,ko00001,ko01000 reductase
IJBIPKIF_00965 4.35e-108 - - - S - - - Pyridoxamine 5'-phosphate oxidase
IJBIPKIF_00966 2.29e-224 yobV3 - - K - - - WYL domain
IJBIPKIF_00967 0.0 - - - - - - - -
IJBIPKIF_00968 0.0 - - - - - - - -
IJBIPKIF_00969 0.0 ppc 4.1.1.31 - C ko:K01595 ko00620,ko00680,ko00710,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00710,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 phosphoenolpyruvate carboxylase activity
IJBIPKIF_00970 3.16e-190 mccB 4.4.1.1, 4.4.1.2, 4.4.1.8 - E ko:K01760,ko:K17217 ko00260,ko00270,ko00450,ko00920,ko01100,ko01110,ko01130,ko01230,map00260,map00270,map00450,map00920,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 cystathionine
IJBIPKIF_00971 6.01e-54 mccB 4.4.1.1, 4.4.1.2, 4.4.1.8 - E ko:K01760,ko:K17217 ko00260,ko00270,ko00450,ko00920,ko01100,ko01110,ko01130,ko01230,map00260,map00270,map00450,map00920,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 cystathionine
IJBIPKIF_00972 4.4e-138 mccA 2.5.1.134, 2.5.1.47 - E ko:K01738,ko:K17216 ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the cysteine synthase cystathionine beta- synthase family
IJBIPKIF_00973 5.39e-308 steT - - E ko:K03294 - ko00000 amino acid
IJBIPKIF_00974 2.81e-148 - - - S ko:K07118 - ko00000 NAD(P)H-binding
IJBIPKIF_00975 2.51e-198 - - - F ko:K15051 - ko00000 DNA/RNA non-specific endonuclease
IJBIPKIF_00976 2.55e-118 - - - L - - - nuclease
IJBIPKIF_00977 3.03e-115 luxS 4.4.1.21 - H ko:K07173 ko00270,ko01100,ko01230,ko02024,ko02026,ko05111,map00270,map01100,map01230,map02024,map02026,map05111 ko00000,ko00001,ko00002,ko01000 Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
IJBIPKIF_00978 1.23e-278 metE 2.1.1.14 - E ko:K00549 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 methionine synthase, vitamin-B12 independent
IJBIPKIF_00979 5.33e-147 - - - S - - - L,D-transpeptidase catalytic domain
IJBIPKIF_00980 2.27e-248 cbh 3.5.1.24 - M ko:K01442 ko00120,ko00121,ko01100,map00120,map00121,map01100 ko00000,ko00001,ko01000 Linear amide C-N hydrolase, choloylglycine hydrolase family protein
IJBIPKIF_00981 2.2e-310 - - - L ko:K07478 - ko00000 AAA C-terminal domain
IJBIPKIF_00982 3.74e-130 ltrA - - S - - - Bacterial low temperature requirement A protein (LtrA)
IJBIPKIF_00983 0.0 mleS 1.1.1.38, 4.1.1.101 - C ko:K00027,ko:K22212 ko00620,ko01120,ko01200,ko02020,map00620,map01120,map01200,map02020 ko00000,ko00001,ko01000 Malic enzyme
IJBIPKIF_00984 3.77e-216 mleR - - K - - - LysR family
IJBIPKIF_00985 8.78e-52 - - - - - - - -
IJBIPKIF_00986 9.6e-137 - - - - - - - -
IJBIPKIF_00987 2.58e-67 mleP2 - - S ko:K07088 - ko00000 Sodium Bile acid symporter family
IJBIPKIF_00988 1.24e-47 - - - - - - - -
IJBIPKIF_00989 1.79e-144 - - - S ko:K07025 - ko00000 Haloacid dehalogenase-like hydrolase
IJBIPKIF_00990 1.06e-185 - - - F - - - Phosphorylase superfamily
IJBIPKIF_00991 2.07e-189 - - - F - - - Phosphorylase superfamily
IJBIPKIF_00992 3.34e-139 - 5.4.2.11 - G ko:K01834 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Phosphoglycerate mutase family
IJBIPKIF_00993 2.72e-188 - - - F - - - Phosphorylase superfamily
IJBIPKIF_00994 1.22e-103 - - - - - - - -
IJBIPKIF_00995 6.2e-131 - - - - - - - -
IJBIPKIF_00996 1.62e-135 - - - S - - - Alpha/beta hydrolase family
IJBIPKIF_00997 4.91e-121 rimL - - J ko:K03817 - ko00000,ko01000,ko03009 Acetyltransferase (GNAT) domain
IJBIPKIF_00998 5.21e-82 - - - - - - - -
IJBIPKIF_00999 1.24e-113 - - - FG - - - HIT domain
IJBIPKIF_01000 2.43e-100 - - - - - - - -
IJBIPKIF_01001 2.53e-152 yjhB 3.6.1.13 - F ko:K01515 ko00230,map00230 ko00000,ko00001,ko01000 NUDIX domain
IJBIPKIF_01002 1.7e-199 - - - K - - - Bacterial regulatory helix-turn-helix protein, lysR family
IJBIPKIF_01003 9.73e-275 - - - EGP - - - Major Facilitator Superfamily
IJBIPKIF_01004 3.18e-167 - - - F - - - glutamine amidotransferase
IJBIPKIF_01005 3.18e-140 - - - - - - - -
IJBIPKIF_01006 1.41e-141 - - - - - - - -
IJBIPKIF_01007 5.1e-43 - - - - - - - -
IJBIPKIF_01008 1.81e-223 - - - S ko:K07045 - ko00000 Amidohydrolase
IJBIPKIF_01009 1.72e-142 - - - G - - - Phosphoglycerate mutase family
IJBIPKIF_01010 2.66e-117 tpx 1.11.1.15 - O ko:K11065 - ko00000,ko01000 Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
IJBIPKIF_01011 3.59e-205 cjaA - - ET ko:K02030 - ko00000,ko00002,ko02000 ABC transporter substrate-binding protein
IJBIPKIF_01012 6.13e-177 glnQ 3.6.3.21 - E ko:K02028 - ko00000,ko00002,ko01000,ko02000 ABC transporter, ATP-binding protein
IJBIPKIF_01013 2.48e-131 glnP7 - - P ko:K02029 - ko00000,ko00002,ko02000 ABC transporter permease
IJBIPKIF_01014 3.25e-145 glnP9 - - P ko:K02029 - ko00000,ko00002,ko02000 ABC transporter, permease protein
IJBIPKIF_01015 4.2e-42 lysR - - K - - - Transcriptional regulator
IJBIPKIF_01016 2.77e-220 - - - - - - - -
IJBIPKIF_01017 3.34e-211 - - - S - - - reductase
IJBIPKIF_01018 8.07e-313 brnQ - - U ko:K03311 - ko00000 Component of the transport system for branched-chain amino acids
IJBIPKIF_01019 2.07e-102 - - - K - - - Transcriptional regulator
IJBIPKIF_01020 2.77e-134 - - - - - - - -
IJBIPKIF_01023 1.7e-133 - - - K - - - Acetyltransferase (GNAT) domain
IJBIPKIF_01024 5.42e-275 - - - S - - - SLAP domain
IJBIPKIF_01025 1.31e-211 yvgN - - C - - - Aldo keto reductase
IJBIPKIF_01026 1.08e-212 akr5f 1.1.1.346 - S ko:K06221 - ko00000,ko01000 reductase
IJBIPKIF_01027 6.27e-215 - 1.1.1.346 - S ko:K06221 - ko00000,ko01000 Oxidoreductase, aldo keto reductase family protein
IJBIPKIF_01028 5.96e-205 - - - K - - - Transcriptional regulator
IJBIPKIF_01029 5.93e-149 - - - GM - - - NAD dependent epimerase dehydratase family protein
IJBIPKIF_01030 1.72e-208 - 3.5.3.1 - E ko:K01476 ko00220,ko00330,ko01100,ko01110,ko01130,ko01230,ko05146,map00220,map00330,map01100,map01110,map01130,map01230,map05146 ko00000,ko00001,ko00002,ko01000 Arginase family
IJBIPKIF_01031 9.5e-39 - - - K - - - bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding
IJBIPKIF_01032 0.0 - - - M - - - LPXTG-motif cell wall anchor domain protein
IJBIPKIF_01033 0.0 - - - M - - - LPXTG-motif cell wall anchor domain protein
IJBIPKIF_01034 2.61e-19 - - - M - - - LPXTG-motif cell wall anchor domain protein
IJBIPKIF_01035 1.46e-240 lacR - - K ko:K02529 - ko00000,ko03000 Transcriptional regulator
IJBIPKIF_01036 0.0 dnaX 2.7.7.7 - L ko:K02343 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
IJBIPKIF_01037 9.21e-120 tadA 3.5.4.33 - F ko:K11991 - ko00000,ko01000,ko03016 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
IJBIPKIF_01038 4.9e-33 - - - - - - - -
IJBIPKIF_01039 1.25e-147 rsmC 2.1.1.172 - J ko:K00564 - ko00000,ko01000,ko03009 Methyltransferase
IJBIPKIF_01040 3.83e-167 - 2.1.1.172 - J ko:K00564,ko:K10716 - ko00000,ko01000,ko02000,ko03009 Ion channel
IJBIPKIF_01041 9.31e-72 rplL - - J ko:K02935 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
IJBIPKIF_01042 2.15e-110 rplJ - - J ko:K02864 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
IJBIPKIF_01043 1.86e-38 - - - - - - - -
IJBIPKIF_01044 3.62e-268 ywkB - - S ko:K07088 - ko00000 Membrane transport protein
IJBIPKIF_01045 1.74e-152 phoU - - P ko:K02039 - ko00000 Plays a role in the regulation of phosphate uptake
IJBIPKIF_01046 5.67e-180 pstB1 3.6.3.27 - P ko:K02036 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
IJBIPKIF_01047 4.47e-186 pstB2 3.6.3.27 - P ko:K02036 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
IJBIPKIF_01048 4.47e-199 pstA - - P ko:K02038 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Phosphate transport system permease protein PstA
IJBIPKIF_01049 1.8e-223 pstC - - P ko:K02037 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 probably responsible for the translocation of the substrate across the membrane
IJBIPKIF_01050 2.83e-203 pstS - - P ko:K02040 ko02010,ko02020,ko05152,map02010,map02020,map05152 ko00000,ko00001,ko00002,ko02000 Phosphate
IJBIPKIF_01051 1.5e-160 rplA - - J ko:K02863 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
IJBIPKIF_01052 2.69e-90 rplK - - J ko:K02867 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
IJBIPKIF_01053 3.66e-132 nusG - - K ko:K02601 - ko00000,ko03009,ko03021 Participates in transcription elongation, termination and antitermination
IJBIPKIF_01054 1.72e-33 secE - - U ko:K03073 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
IJBIPKIF_01055 0.0 dxs 2.2.1.7 - H ko:K01662 ko00730,ko00900,ko01100,ko01110,ko01130,map00730,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
IJBIPKIF_01056 1.22e-220 - - - K - - - helix_turn_helix, arabinose operon control protein
IJBIPKIF_01057 0.0 gntK 2.7.1.12 - G ko:K00851 ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko01000 Belongs to the FGGY kinase family
IJBIPKIF_01058 6.48e-148 - - - - - - - -
IJBIPKIF_01059 2.41e-45 - - - - - - - -
IJBIPKIF_01060 2.91e-121 comX - - K ko:K03088,ko:K03091,ko:K12296 ko02020,ko02024,map02020,map02024 ko00000,ko00001,ko03000,ko03021 Belongs to the sigma-70 factor family
IJBIPKIF_01061 4.31e-179 trmH 2.1.1.185 - J ko:K03218 - ko00000,ko01000,ko03009 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
IJBIPKIF_01062 6.01e-99 mrnC - - J ko:K11145 - ko00000,ko01000,ko03009 Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
IJBIPKIF_01063 0.0 cysS 6.1.1.16 - J ko:K01883 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the class-I aminoacyl-tRNA synthetase family
IJBIPKIF_01064 0.0 gltX 6.1.1.24 - J ko:K09698 ko00970,ko01100,map00970,map01100 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
IJBIPKIF_01065 0.0 radA - - O ko:K04485 - ko00000,ko03400 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
IJBIPKIF_01066 1.82e-131 dut 3.6.1.23 - F ko:K01520 ko00240,ko00983,ko01100,map00240,map00983,map01100 ko00000,ko00001,ko00002,ko01000,ko03400 dUTP diphosphatase
IJBIPKIF_01067 9.95e-70 - - - - - - - -
IJBIPKIF_01068 0.0 pepC 3.4.22.40 - E ko:K01372 - ko00000,ko01000,ko01002 Peptidase C1-like family
IJBIPKIF_01069 9.84e-236 - - - S - - - AAA domain
IJBIPKIF_01070 1.27e-104 gpmA1 5.4.2.11 - G ko:K01834 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
IJBIPKIF_01071 1.14e-27 - - - - - - - -
IJBIPKIF_01072 5.3e-209 - - - P ko:K16264 - ko00000,ko02000 cation diffusion facilitator family transporter
IJBIPKIF_01073 6.91e-164 - - - G - - - Belongs to the phosphoglycerate mutase family
IJBIPKIF_01074 8.09e-160 - - - S ko:K07090 - ko00000 membrane transporter protein
IJBIPKIF_01075 4.67e-154 - 3.8.1.2 - S ko:K01560,ko:K07025 ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120 ko00000,ko00001,ko01000 Haloacid dehalogenase-like hydrolase
IJBIPKIF_01076 3.63e-141 - 3.5.1.124 - S ko:K03152 - ko00000,ko01000,ko01002 DJ-1/PfpI family
IJBIPKIF_01077 5.27e-16 - - - - - - - -
IJBIPKIF_01079 1.53e-85 - - - S - - - YjcQ protein
IJBIPKIF_01080 0.0 yeeA - - V - - - Type II restriction enzyme, methylase subunits
IJBIPKIF_01082 1.48e-69 - - - - - - - -
IJBIPKIF_01083 2.52e-264 - - - D - - - COG1674 DNA segregation ATPase FtsK SpoIIIE and related proteins
IJBIPKIF_01084 1.77e-61 - - - - - - - -
IJBIPKIF_01085 1.31e-270 - - - EP - - - Plasmid replication protein
IJBIPKIF_01086 4.24e-37 - - - - - - - -
IJBIPKIF_01087 7.71e-255 - - - L - - - Phage integrase family
IJBIPKIF_01088 8.28e-87 rpsI - - J ko:K02996 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the universal ribosomal protein uS9 family
IJBIPKIF_01089 1.6e-103 rplM - - J ko:K02871 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
IJBIPKIF_01090 4.17e-192 truA 5.4.99.12 - J ko:K06173 - ko00000,ko01000,ko03016 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
IJBIPKIF_01091 1.74e-181 ecfT - - U ko:K16785 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
IJBIPKIF_01092 4.04e-206 ecfA2 - - P ko:K16787 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
IJBIPKIF_01093 4.16e-198 ecfA1 - - P ko:K16786 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
IJBIPKIF_01094 1.57e-80 rplQ - - J ko:K02879 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal protein L17
IJBIPKIF_01095 2.55e-218 rpoA 2.7.7.6 - K ko:K03040 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
IJBIPKIF_01096 3.95e-82 rpsK - - J ko:K02948 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
IJBIPKIF_01097 2.07e-73 rpsM - - J ko:K02952 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
IJBIPKIF_01098 4.63e-22 rpmJ - - J ko:K02919 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL36 family
IJBIPKIF_01099 3.13e-46 infA - - J ko:K02518 - ko00000,ko03012 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
IJBIPKIF_01100 1.29e-155 adk 2.7.4.3 - F ko:K00939 ko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000,ko04147 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
IJBIPKIF_01101 3.59e-301 secY - - U ko:K03076 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
IJBIPKIF_01102 2.45e-93 rplO - - J ko:K02876 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds to the 23S rRNA
IJBIPKIF_01103 1.1e-34 rpmD - - J ko:K02907 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal protein L30
IJBIPKIF_01104 5.3e-110 rpsE - - J ko:K02988 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
IJBIPKIF_01105 4.84e-73 rplR - - J ko:K02881 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
IJBIPKIF_01106 2.5e-121 rplF - - J ko:K02933 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
IJBIPKIF_01107 2.28e-89 rpsH - - J ko:K02994 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
IJBIPKIF_01108 1e-39 rpsN - - J ko:K02954 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
IJBIPKIF_01109 1.23e-123 rplE - - J ko:K02931 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
IJBIPKIF_01110 6.92e-45 rplX - - J ko:K02895 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
IJBIPKIF_01111 3.62e-79 rplN - - J ko:K02874 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
IJBIPKIF_01112 1.1e-55 rpsQ - - J ko:K02961 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
IJBIPKIF_01113 1.45e-34 rpmC - - J ko:K02904 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the universal ribosomal protein uL29 family
IJBIPKIF_01114 9.64e-100 rplP - - J ko:K02878 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
IJBIPKIF_01115 7.15e-156 rpsC - - J ko:K02982 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
IJBIPKIF_01116 9.07e-73 rplV - - J ko:K02890 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
IJBIPKIF_01117 1.34e-61 rpsS - - J ko:K02965 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
IJBIPKIF_01118 9.85e-199 rplB - - J ko:K02886 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
IJBIPKIF_01119 3.57e-62 rplW - - J ko:K02892 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
IJBIPKIF_01120 1.91e-137 rplD - - J ko:K02926 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms part of the polypeptide exit tunnel
IJBIPKIF_01121 6.64e-146 rplC - - J ko:K02906 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
IJBIPKIF_01122 6.34e-66 rpsJ - - J ko:K02946 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Involved in the binding of tRNA to the ribosomes
IJBIPKIF_01123 0.0 fusA - - J ko:K02355 - ko00000,ko03012,ko03029 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
IJBIPKIF_01124 6.89e-107 rpsG - - J ko:K02992 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
IJBIPKIF_01125 2.09e-91 rpsL - - J ko:K02950 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
IJBIPKIF_01126 6.6e-159 comC 3.4.23.43 - NOU ko:K02236 - ko00000,ko00002,ko01000,ko02044 Bacterial Peptidase A24 N-terminal domain
IJBIPKIF_01127 0.0 rpoC 2.7.7.6 - K ko:K03046 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
IJBIPKIF_01128 0.0 rpoB 2.7.7.6 - K ko:K03043 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
IJBIPKIF_01129 0.0 clpC - - O ko:K03696 ko01100,map01100 ko00000,ko03110 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
IJBIPKIF_01130 1.16e-107 ytsP 1.8.4.14 - T ko:K08968 ko00270,map00270 ko00000,ko00001,ko01000 GAF domain-containing protein
IJBIPKIF_01134 0.0 lysS 6.1.1.6 - J ko:K04567 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the class-II aminoacyl-tRNA synthetase family
IJBIPKIF_01135 3.5e-249 dus - - J ko:K05540 - ko00000,ko01000,ko03016 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
IJBIPKIF_01136 6.77e-215 hslO - - O ko:K04083 - ko00000,ko03110 Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
IJBIPKIF_01137 0.0 ftsH - - O ko:K03798 - ko00000,ko00002,ko01000,ko01002,ko03110 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
IJBIPKIF_01138 5.11e-307 tilS 2.4.2.8, 6.3.4.19 - J ko:K04075,ko:K15780 ko00230,ko01100,ko01110,map00230,map01100,map01110 ko00000,ko00001,ko01000,ko03016 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
IJBIPKIF_01139 3.95e-82 - - - J ko:K07571 - ko00000 S1 RNA binding domain
IJBIPKIF_01140 1.03e-75 divIC - - D ko:K13052 - ko00000,ko03036 Septum formation initiator
IJBIPKIF_01141 1.79e-46 yabO - - J - - - S4 domain protein
IJBIPKIF_01142 0.0 mfd - - L ko:K03723 ko03420,map03420 ko00000,ko00001,ko01000,ko03400 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
IJBIPKIF_01143 6.58e-135 pth 3.1.1.29 - J ko:K01056 - ko00000,ko01000,ko03012 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
IJBIPKIF_01144 1.98e-232 ldh 1.1.1.27 - C ko:K00016 ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922 ko00000,ko00001,ko01000,ko04147 Belongs to the LDH MDH superfamily. LDH family
IJBIPKIF_01145 1.23e-166 - - - S - - - (CBS) domain
IJBIPKIF_01146 1.62e-276 alr 5.1.1.1, 5.1.1.5 - E ko:K01775,ko:K20707 ko00473,ko01100,ko01502,map00473,map01100,map01502 ko00000,ko00001,ko01000,ko01011 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
IJBIPKIF_01147 3.27e-80 acpS 2.7.8.7 - I ko:K00997 ko00770,map00770 ko00000,ko00001,ko01000 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
IJBIPKIF_01148 0.0 cshA 3.6.4.13 - F ko:K05592 ko03018,map03018 ko00000,ko00001,ko01000,ko03009,ko03019 DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
IJBIPKIF_01149 0.0 murF 6.3.2.10 - M ko:K01929 ko00300,ko00550,ko01100,ko01502,map00300,map00550,map01100,map01502 ko00000,ko00001,ko01000,ko01011 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
IJBIPKIF_01150 5.28e-53 rpmE - - J ko:K02909 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal protein L31
IJBIPKIF_01151 0.0 dexB 3.2.1.70 - G ko:K01215 - ko00000,ko01000 Alpha amylase, catalytic domain protein
IJBIPKIF_01152 9.8e-204 supH 3.1.3.102, 3.1.3.104, 3.1.3.23 - G ko:K07757,ko:K20861 ko00740,ko01100,ko01110,map00740,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Sucrose-6F-phosphate phosphohydrolase
IJBIPKIF_01153 0.0 - - - E - - - amino acid
IJBIPKIF_01154 9.39e-296 glyA 2.1.2.1 - E ko:K00600 ko00260,ko00460,ko00630,ko00670,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko01523,map00260,map00460,map00630,map00670,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map01523 ko00000,ko00001,ko00002,ko01000 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
IJBIPKIF_01155 4.88e-59 - - - - - - - -
IJBIPKIF_01156 8.2e-68 - - - - - - - -
IJBIPKIF_01157 7.47e-126 - - - - - - - -
IJBIPKIF_01158 4.62e-13 - - - P - - - Voltage gated chloride channel
IJBIPKIF_01159 6.74e-39 - - - K ko:K12410 - ko00000,ko01000 NAD+ binding
IJBIPKIF_01160 3.18e-106 ogt 2.1.1.63 - L ko:K00567,ko:K13531 - ko00000,ko01000,ko03400 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
IJBIPKIF_01161 5.49e-42 - - - - - - - -
IJBIPKIF_01162 2.89e-44 - - - P - - - Belongs to the major facilitator superfamily
IJBIPKIF_01163 2.07e-117 - - - P - - - Belongs to the major facilitator superfamily
IJBIPKIF_01164 9.09e-173 XK27_07210 - - S - - - B3 4 domain
IJBIPKIF_01165 7.88e-116 - - - K - - - Acetyltransferase (GNAT) domain
IJBIPKIF_01166 1.16e-63 - - - S - - - Protein of unknown function (DUF3021)
IJBIPKIF_01167 1.03e-96 - - - K - - - LytTr DNA-binding domain
IJBIPKIF_01168 3.12e-191 cylB - - V ko:K11051 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC-2 type transporter
IJBIPKIF_01169 7.77e-199 - - - V ko:K11050 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter
IJBIPKIF_01170 0.0 guaA 6.3.5.2 - F ko:K01951 ko00230,ko00983,ko01100,map00230,map00983,map01100 ko00000,ko00001,ko00002,ko01000,ko01002 Catalyzes the synthesis of GMP from XMP
IJBIPKIF_01171 3.77e-220 - - - K - - - Helix-turn-helix
IJBIPKIF_01172 1.04e-173 - - - K - - - DNA-binding helix-turn-helix protein
IJBIPKIF_01173 5.8e-137 xpt 2.4.2.22 - F ko:K03816 ko00230,ko01100,ko01110,map00230,map01100,map01110 ko00000,ko00001,ko01000 Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
IJBIPKIF_01174 1.21e-285 pbuX - - F ko:K03458,ko:K16169 - ko00000,ko02000 xanthine permease
IJBIPKIF_01175 1.87e-137 ybbB - - S - - - Protein of unknown function (DUF1211)
IJBIPKIF_01176 7.87e-207 msmR - - K - - - AraC-like ligand binding domain
IJBIPKIF_01177 1.59e-205 pepDA - - E ko:K08659 - ko00000,ko01000,ko01002 Dipeptidase
IJBIPKIF_01178 4.42e-142 pepDA - - E ko:K08659 - ko00000,ko01000,ko01002 Dipeptidase
IJBIPKIF_01179 6.32e-311 murA 2.5.1.7 - M ko:K00790 ko00520,ko00550,ko01100,map00520,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
IJBIPKIF_01180 0.0 pyrG 6.3.4.2 - F ko:K01937 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
IJBIPKIF_01181 1.11e-96 rpoE - - K ko:K03048 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 br01611,ko00000,ko00001,ko00002,ko03021,ko03400 Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
IJBIPKIF_01182 4.39e-88 - - - S - - - Domain of unknown function (DUF1934)
IJBIPKIF_01183 0.0 - - - S ko:K06885 - ko00000 Metal dependent phosphohydrolases with conserved 'HD' motif.
IJBIPKIF_01184 4.88e-59 - - - - - - - -
IJBIPKIF_01185 4.58e-216 - - - GK - - - ROK family
IJBIPKIF_01186 0.0 - - - G ko:K02761 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko02000 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
IJBIPKIF_01187 3.82e-167 yecA - - K - - - Helix-turn-helix domain, rpiR family
IJBIPKIF_01188 0.0 - 3.2.1.86 GT1 G ko:K01223 ko00010,ko00500,map00010,map00500 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 1 family
IJBIPKIF_01189 6.58e-227 prs 2.7.6.1 - F ko:K00948 ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
IJBIPKIF_01190 0.0 - - - S - - - SLAP domain
IJBIPKIF_01191 1.48e-114 - - - - - - - -
IJBIPKIF_01192 4.55e-117 - - - S - - - SLAP domain
IJBIPKIF_01193 1.4e-116 - - - S - - - SLAP domain
IJBIPKIF_01194 0.0 glmU 2.3.1.157, 2.7.7.23 - M ko:K04042 ko00520,ko01100,ko01130,map00520,map01100,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
IJBIPKIF_01195 4.31e-192 purR - - F ko:K09685 - ko00000,ko03000 pur operon repressor
IJBIPKIF_01196 9.99e-53 veg - - S - - - Biofilm formation stimulator VEG
IJBIPKIF_01197 4.9e-207 ksgA 2.1.1.182 - J ko:K02528 - ko00000,ko01000,ko03009 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
IJBIPKIF_01198 1.63e-124 rnmV 3.1.26.8 - J ko:K05985 - ko00000,ko01000 Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
IJBIPKIF_01199 2.33e-190 tatD - - L ko:K03424 - ko00000,ko01000 hydrolase, TatD family
IJBIPKIF_01200 0.0 metG 6.1.1.10 - J ko:K01874 ko00450,ko00970,map00450,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
IJBIPKIF_01201 0.0 mgtA 3.6.3.2 - P ko:K01531 - ko00000,ko01000 COG0474 Cation transport ATPase
IJBIPKIF_01202 1.25e-142 - - - S ko:K06872 - ko00000 TPM domain
IJBIPKIF_01203 2.69e-119 comEB 3.5.4.12 - F ko:K01493 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000,ko02044 MafB19-like deaminase
IJBIPKIF_01204 2.35e-244 trpS 6.1.1.2 - J ko:K01867 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the class-I aminoacyl-tRNA synthetase family
IJBIPKIF_01205 1.21e-146 - - - E - - - Belongs to the SOS response-associated peptidase family
IJBIPKIF_01207 1.09e-148 - - - - - - - -
IJBIPKIF_01208 6.92e-101 greA - - K ko:K03624 - ko00000,ko03021 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
IJBIPKIF_01209 1.5e-96 hsp - - O ko:K13993 ko04141,map04141 ko00000,ko00001,ko03110 Belongs to the small heat shock protein (HSP20) family
IJBIPKIF_01210 0.0 pepE 3.4.22.40 - E ko:K01372 - ko00000,ko01000,ko01002 aminopeptidase
IJBIPKIF_01211 1.87e-221 oppF - - P ko:K10823 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 Belongs to the ABC transporter superfamily
IJBIPKIF_01212 1.9e-256 oppD - - P ko:K02031,ko:K15583 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 Belongs to the ABC transporter superfamily
IJBIPKIF_01213 1.92e-240 oppC - - EP ko:K15582 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC-type dipeptide oligopeptide nickel transport systems, permease components
IJBIPKIF_01214 5.46e-191 oppB - - P ko:K15581 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC-type dipeptide oligopeptide nickel transport systems, permease components
IJBIPKIF_01215 8.86e-267 guaB 1.1.1.205 - F ko:K00088 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko04147 Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
IJBIPKIF_01216 0.0 oppA - - E ko:K02035,ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter, substratebinding protein
IJBIPKIF_01217 0.0 oppA - - E ko:K02035,ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter, substratebinding protein
IJBIPKIF_01218 1.16e-162 ypgQ - - S ko:K06950 - ko00000 Metal dependent phosphohydrolases with conserved 'HD' motif.
IJBIPKIF_01219 0.0 pepC1 3.4.22.40 - E ko:K01372 - ko00000,ko01000,ko01002 aminopeptidase
IJBIPKIF_01221 1.02e-74 - - - - - - - -
IJBIPKIF_01222 6.28e-310 tyrS 6.1.1.1 - J ko:K01866 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
IJBIPKIF_01223 0.0 - - - S - - - Fibronectin type III domain
IJBIPKIF_01224 0.0 XK27_08315 - - M - - - Sulfatase
IJBIPKIF_01225 2.73e-146 plsY1 2.3.1.15 - I ko:K08591 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko01004 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
IJBIPKIF_01226 1.34e-259 brpA - - K - - - Cell envelope-like function transcriptional attenuator common domain protein
IJBIPKIF_01227 1.96e-132 - - - G - - - Aldose 1-epimerase
IJBIPKIF_01228 8.51e-143 pcp 3.4.19.3 - O ko:K01304 - ko00000,ko01000,ko01002 Removes 5-oxoproline from various penultimate amino acid residues except L-proline
IJBIPKIF_01229 1.84e-170 gpmA 5.4.2.11 - G ko:K01834 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
IJBIPKIF_01230 2.12e-176 - - - - - - - -
IJBIPKIF_01231 4.62e-181 - - - - - - - -
IJBIPKIF_01232 6.61e-230 - - - S - - - Oxidoreductase family, NAD-binding Rossmann fold
IJBIPKIF_01233 0.0 yjbQ - - P ko:K03455,ko:K03499 - ko00000,ko02000 TrkA C-terminal domain protein
IJBIPKIF_01234 7.59e-269 - 3.2.1.96, 3.5.1.28 GH73 M ko:K01227,ko:K01447,ko:K13714,ko:K13731 ko00511,ko05100,map00511,map05100 ko00000,ko00001,ko01000 N-acetylmuramoyl-L-alanine amidase
IJBIPKIF_01235 2.53e-283 - - - NU - - - Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
IJBIPKIF_01237 0.0 oppA - - E ko:K02035 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter substrate-binding protein
IJBIPKIF_01238 0.0 oppA - - E ko:K02035 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter substrate-binding protein
IJBIPKIF_01239 5.84e-202 oppC5 - - P ko:K02034 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
IJBIPKIF_01240 1.28e-226 oppB - - P ko:K02033,ko:K02034 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter permease
IJBIPKIF_01241 8.73e-234 oppF - - P ko:K02032 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 Belongs to the ABC transporter superfamily
IJBIPKIF_01242 1.43e-251 oppD - - P ko:K02031,ko:K15583 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 Belongs to the ABC transporter superfamily
IJBIPKIF_01243 1.53e-47 acpP - - IQ ko:K02078 - ko00000,ko00001 Carrier of the growing fatty acid chain in fatty acid biosynthesis
IJBIPKIF_01244 3.16e-234 plsX 2.3.1.15 - I ko:K03621 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko01004 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
IJBIPKIF_01245 0.0 recG 3.6.4.12 - L ko:K03655 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
IJBIPKIF_01246 0.0 yloV - - S ko:K07030 - ko00000 DAK2 domain fusion protein YloV
IJBIPKIF_01247 1.67e-74 yloU - - S - - - Asp23 family, cell envelope-related function
IJBIPKIF_01248 2.29e-36 rpmB - - J ko:K02902 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL28 family
IJBIPKIF_01249 1.5e-68 - - - - - - - -
IJBIPKIF_01250 3.29e-163 thiN 2.7.6.2 - H ko:K00949 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko01000 thiamine pyrophosphokinase
IJBIPKIF_01251 5.27e-154 rpe 5.1.3.1 - G ko:K01783 ko00030,ko00040,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the ribulose-phosphate 3-epimerase family
IJBIPKIF_01252 1.37e-214 rsgA 3.1.3.100 - S ko:K06949 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko01000,ko03009 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
IJBIPKIF_01253 0.0 prkC 2.7.11.1 - KLT ko:K08884,ko:K12132 - ko00000,ko01000,ko01001 serine threonine protein kinase
IJBIPKIF_01254 9.79e-181 stp 3.1.3.16 - T ko:K20074 - ko00000,ko01000,ko01009 phosphatase
IJBIPKIF_01255 4.61e-313 sun 2.1.1.176 - J ko:K03500 - ko00000,ko01000,ko03009 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
IJBIPKIF_01256 1.08e-220 fmt 2.1.2.9 - J ko:K00604 ko00670,ko00970,map00670,map00970 ko00000,ko00001,ko01000 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
IJBIPKIF_01257 0.0 priA - - L ko:K04066 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
IJBIPKIF_01258 2.37e-46 rpoZ 2.7.7.6 - K ko:K03060 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
IJBIPKIF_01259 2.53e-146 gmk 2.7.4.8 - F ko:K00942 ko00230,ko01100,map00230,map01100 ko00000,ko00001,ko00002,ko01000 Essential for recycling GMP and indirectly, cGMP
IJBIPKIF_01260 2.88e-105 - - - S - - - ASCH
IJBIPKIF_01261 0.0 recN - - L ko:K03631 - ko00000,ko03400 May be involved in recombinational repair of damaged DNA
IJBIPKIF_01262 1.52e-198 rrmJ 2.1.1.226, 2.1.1.227 - J ko:K06442 - ko00000,ko01000,ko03009 Ribosomal RNA large subunit methyltransferase J
IJBIPKIF_01263 1.84e-204 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29 - H ko:K13789 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000,ko01006 Belongs to the FPP GGPP synthase family
IJBIPKIF_01264 3.76e-48 xseB 3.1.11.6 - L ko:K03602 ko03430,map03430 ko00000,ko00001,ko01000,ko03400 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
IJBIPKIF_01265 5.86e-310 xseA 3.1.11.6 - L ko:K03601 ko03430,map03430 ko00000,ko00001,ko01000,ko03400 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
IJBIPKIF_01266 5.91e-198 folD 1.5.1.5, 3.5.4.9 - F ko:K01491 ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
IJBIPKIF_01267 1.28e-85 nusB - - K ko:K03625 - ko00000,ko03009,ko03021 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
IJBIPKIF_01268 2.57e-94 WQ51_04310 - - S ko:K10947 - ko00000,ko03000 Asp23 family, cell envelope-related function
IJBIPKIF_01269 6.05e-133 efp - - J ko:K02356 - ko00000,ko03012 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
IJBIPKIF_01270 3.69e-258 pepP 3.4.11.9, 3.4.13.9 - E ko:K01262,ko:K01271 - ko00000,ko01000,ko01002 Creatinase/Prolidase N-terminal domain
IJBIPKIF_01271 7.95e-64 rpmA - - J ko:K02899 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL27 family
IJBIPKIF_01272 4.8e-66 rplU - - J ko:K02888 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This protein binds to 23S rRNA in the presence of protein L20
IJBIPKIF_01273 3.54e-192 - - - S - - - Uncharacterised 5xTM membrane BCR, YitT family COG1284
IJBIPKIF_01274 0.0 - - - S - - - Uncharacterized protein conserved in bacteria (DUF2325)
IJBIPKIF_01275 3.98e-257 ilvE 2.6.1.42 - E ko:K00826 ko00270,ko00280,ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00270,map00280,map00290,map00770,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Branched-chain amino acid aminotransferase
IJBIPKIF_01276 4.18e-38 dmpI 5.3.2.6 - G ko:K01821 ko00362,ko00621,ko00622,ko01100,ko01120,ko01220,map00362,map00621,map00622,map01100,map01120,map01220 ko00000,ko00001,ko00002,ko01000 Belongs to the 4-oxalocrotonate tautomerase family
IJBIPKIF_01277 4.41e-137 - - - Q - - - Imidazolonepropionase and related amidohydrolases
IJBIPKIF_01278 9.64e-141 - - - Q - - - Imidazolonepropionase and related amidohydrolases
IJBIPKIF_01279 7.45e-09 oppA - - E ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter
IJBIPKIF_01280 9.58e-80 oppA - - E ko:K02035,ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter
IJBIPKIF_01281 7.38e-127 oppA - - E ko:K02035,ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter
IJBIPKIF_01282 3.88e-196 - 2.7.1.95 - F ko:K00897 - ko00000,ko01000,ko01504 Belongs to the aminoglycoside phosphotransferase family
IJBIPKIF_01283 0.0 - - - S - - - Predicted membrane protein (DUF2207)
IJBIPKIF_01284 3.04e-198 cinI - - S ko:K06889 - ko00000 Serine hydrolase (FSH1)
IJBIPKIF_01285 1.16e-162 - - - M ko:K07273 - ko00000 Glycosyl hydrolases family 25
IJBIPKIF_01286 1.75e-95 - - - M ko:K07273 - ko00000 Glycosyl hydrolases family 25
IJBIPKIF_01288 4.22e-211 - - - S - - - Membrane
IJBIPKIF_01289 1.75e-227 lipA - - I - - - Carboxylesterase family
IJBIPKIF_01290 4.8e-87 yusI 1.20.4.1 - P ko:K00537 - ko00000,ko01000 Belongs to the ArsC family
IJBIPKIF_01291 0.0 - - - V ko:K06148 - ko00000,ko02000 ABC-type multidrug transport system, ATPase and permease components
IJBIPKIF_01292 0.0 - - - V ko:K06148 - ko00000,ko02000 ABC-type multidrug transport system, ATPase and permease components
IJBIPKIF_01293 1.84e-195 supH - - S - - - haloacid dehalogenase-like hydrolase
IJBIPKIF_01294 1.64e-262 - - - - - - - -
IJBIPKIF_01295 1.71e-211 - - - - - - - -
IJBIPKIF_01296 0.0 lacA 3.2.1.23 - G ko:K12308 ko00052,map00052 ko00000,ko00001,ko01000 -beta-galactosidase
IJBIPKIF_01297 0.0 - 3.2.1.177 GH31 G ko:K01811 - ko00000,ko01000 Belongs to the glycosyl hydrolase 31 family
IJBIPKIF_01298 0.0 - 3.2.1.21, 3.2.1.86 GT1 G ko:K01223,ko:K05350 ko00010,ko00460,ko00500,ko00940,ko01100,ko01110,map00010,map00460,map00500,map00940,map01100,map01110 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 1 family
IJBIPKIF_01299 7.89e-213 - 2.7.1.85 - GK ko:K18673 - ko00000,ko01000 ROK family
IJBIPKIF_01300 3.58e-262 xylR - - GK - - - ROK family
IJBIPKIF_01301 4.19e-302 celD - - G ko:K02761 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko02000 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
IJBIPKIF_01302 9.35e-128 - - - S - - - Bacterial PH domain
IJBIPKIF_01303 3.5e-22 - - - - - - - -
IJBIPKIF_01304 1.02e-85 - - - K - - - sequence-specific DNA binding
IJBIPKIF_01305 2.45e-63 - - - S - - - Motility quorum-sensing regulator, toxin of MqsA
IJBIPKIF_01306 0.0 pepX 3.4.14.11 - E ko:K01281 - ko00000,ko01000,ko01002 Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
IJBIPKIF_01307 1.67e-104 msrB 1.8.4.12 - O ko:K07305 - ko00000,ko01000 peptide methionine sulfoxide reductase
IJBIPKIF_01308 2.43e-62 - - - - - - - -
IJBIPKIF_01309 1.74e-192 - - - U ko:K05340 - ko00000,ko02000 sugar transport
IJBIPKIF_01310 0.0 - - - - - - - -
IJBIPKIF_01311 2.73e-07 - - - D - - - Domain of Unknown Function (DUF1542)
IJBIPKIF_01312 0.0 carB 6.3.5.5 - F ko:K01955 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Carbamoyl-phosphate synthase
IJBIPKIF_01313 2.85e-267 carA 6.3.5.5 - F ko:K01956 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Carbamoyl-phosphate synthetase glutamine chain
IJBIPKIF_01314 5.02e-314 pyrC 3.5.2.3 - F ko:K01465 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
IJBIPKIF_01315 3.43e-235 pyrB 2.1.3.2 - F ko:K00609 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the ATCase OTCase family
IJBIPKIF_01316 1.75e-123 pyrR 2.4.2.9 - F ko:K02825 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko01000,ko03000 Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
IJBIPKIF_01317 1.94e-215 pyrD 1.3.1.14, 1.3.98.1 - F ko:K00226,ko:K17828 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
IJBIPKIF_01318 7.44e-168 pyrF 4.1.1.23 - F ko:K01591 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
IJBIPKIF_01319 2.73e-154 pyrE 2.4.2.10 - F ko:K00762 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
IJBIPKIF_01320 3.3e-152 - - - GM - - - NmrA-like family
IJBIPKIF_01321 0.0 yoaB 3.6.3.8 - P ko:K01537 - ko00000,ko01000 P-type ATPase
IJBIPKIF_01322 9.28e-317 eriC - - P ko:K03281 - ko00000 chloride
IJBIPKIF_01323 1.86e-141 - - - O - - - Matrixin
IJBIPKIF_01324 0.0 - - - M - - - LPXTG-motif cell wall anchor domain protein
IJBIPKIF_01325 3.89e-122 - - - K - - - acetyltransferase
IJBIPKIF_01326 1.65e-66 - - - - - - - -
IJBIPKIF_01327 2.34e-204 metQ - - P ko:K02073 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Belongs to the nlpA lipoprotein family
IJBIPKIF_01328 2.87e-62 - - - - - - - -
IJBIPKIF_01329 7.22e-161 - 4.3.1.17 - E ko:K01752 ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230 ko00000,ko00001,ko01000 Serine dehydratase beta chain
IJBIPKIF_01330 1.15e-200 sdaAA 4.3.1.17 - E ko:K01752 ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230 ko00000,ko00001,ko01000 L-serine dehydratase, iron-sulfur-dependent, alpha subunit
IJBIPKIF_01331 2.66e-68 yitW - - S - - - Iron-sulfur cluster assembly protein
IJBIPKIF_01332 0.0 oppA - - E ko:K02035 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter substrate-binding protein
IJBIPKIF_01334 0.0 npr 1.11.1.1 - C ko:K05910 - ko00000,ko01000 NADH oxidase
IJBIPKIF_01335 7.81e-82 - - - S - - - Bacterial toxin of type II toxin-antitoxin system, YafQ
IJBIPKIF_01336 3.88e-60 - - - D ko:K19159 - ko00000,ko02048 Antitoxin component of a toxin-antitoxin (TA) module
IJBIPKIF_01337 1.45e-149 ylbE - - GM - - - NAD(P)H-binding
IJBIPKIF_01338 2.97e-76 - - - T ko:K07171 - ko00000,ko01000,ko02048 PemK-like, MazF-like toxin of type II toxin-antitoxin system
IJBIPKIF_01339 1.08e-85 - - - S - - - ASCH domain
IJBIPKIF_01340 6.71e-153 - - - S - - - GyrI-like small molecule binding domain
IJBIPKIF_01342 1.3e-206 - - - K - - - Bacterial regulatory helix-turn-helix protein, lysR family
IJBIPKIF_01343 0.0 - 1.3.5.4 - C ko:K00244 ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020 ko00000,ko00001,ko00002,ko01000 FMN_bind
IJBIPKIF_01346 2.26e-267 - 2.7.7.65 - T ko:K02488 ko02020,ko04112,map02020,map04112 ko00000,ko00001,ko00002,ko01000,ko02022 GGDEF domain
IJBIPKIF_01347 1.63e-169 - - - T - - - Putative diguanylate phosphodiesterase
IJBIPKIF_01348 8.74e-192 - - - T - - - EAL domain
IJBIPKIF_01349 8.31e-313 yijG - GT2 M ko:K11936 ko02026,map02026 ko00000,ko00001,ko01000,ko01003,ko02000 Glycosyl transferase
IJBIPKIF_01350 3.07e-119 - - - - - - - -
IJBIPKIF_01351 9.37e-227 - - - C - - - Oxidoreductase
IJBIPKIF_01353 4.69e-271 - - - L ko:K07496 - ko00000 TIGRFAM transposase, IS605 OrfB family
IJBIPKIF_01354 4.27e-37 - - - C - - - pentaerythritol trinitrate reductase activity
IJBIPKIF_01355 4.83e-141 pncA - - Q - - - Isochorismatase family
IJBIPKIF_01356 2.86e-19 - - - - - - - -
IJBIPKIF_01357 0.0 potE - - E - - - Amino Acid
IJBIPKIF_01358 2.05e-163 - - - S - - - Alpha beta hydrolase
IJBIPKIF_01360 1.31e-165 - - - - - - - -
IJBIPKIF_01361 5.44e-163 - - - S - - - L-ascorbic acid biosynthetic process
IJBIPKIF_01362 8.84e-93 - - - O - - - OsmC-like protein
IJBIPKIF_01363 3.65e-272 - - - EGP - - - Major Facilitator Superfamily
IJBIPKIF_01364 9.45e-298 sptS - - T - - - Histidine kinase
IJBIPKIF_01365 1.28e-152 dltr - - K - - - response regulator
IJBIPKIF_01366 4.2e-147 - - - T - - - Region found in RelA / SpoT proteins
IJBIPKIF_01367 7.55e-241 dhaK 2.7.1.121 - G ko:K05878 ko00561,ko01100,map00561,map01100 ko00000,ko00001,ko01000 Dak1 domain
IJBIPKIF_01368 1.31e-134 dhaL 2.7.1.121 - S ko:K05879 ko00561,ko01100,map00561,map01100 ko00000,ko00001,ko01000 Dak2
IJBIPKIF_01369 8.2e-81 dhaM 2.7.1.121 - S ko:K05881 ko00561,map00561 ko00000,ko00001,ko01000,ko02000 PTS system fructose IIA component
IJBIPKIF_01370 1.63e-171 glpF - - U ko:K02440 - ko00000,ko02000 Belongs to the MIP aquaporin (TC 1.A.8) family
IJBIPKIF_01371 0.0 gtfA 2.4.1.7 GH13 G ko:K00690 ko00500,map00500 ko00000,ko00001,ko01000 Sucrose glucosyltransferase
IJBIPKIF_01372 0.0 melA 3.2.1.22 - G ko:K07407 ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603 ko00000,ko00001,ko01000 alpha-galactosidase
IJBIPKIF_01373 3.33e-266 msmX - - P ko:K10112 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Belongs to the ABC transporter superfamily
IJBIPKIF_01374 3.56e-196 - - - P ko:K10119 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
IJBIPKIF_01375 1.98e-200 msmF - - P ko:K10118 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
IJBIPKIF_01376 6.26e-309 msmE - - G ko:K10117 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Bacterial extracellular solute-binding protein
IJBIPKIF_01377 7.27e-206 lacR - - K - - - helix_turn_helix, arabinose operon control protein
IJBIPKIF_01378 2.78e-98 - - - K - - - MerR HTH family regulatory protein
IJBIPKIF_01379 0.0 ycnB - - U - - - Belongs to the major facilitator superfamily
IJBIPKIF_01380 4.02e-124 - - - S - - - Domain of unknown function (DUF4811)
IJBIPKIF_01381 9.46e-67 - - - S - - - Domain of unknown function (DUF4160)
IJBIPKIF_01382 1.53e-61 - - - - - - - -
IJBIPKIF_01384 3.46e-53 - - - C - - - FMN binding
IJBIPKIF_01385 1.42e-215 - - - S - - - SLAP domain
IJBIPKIF_01386 6.76e-247 galM 5.1.3.3 - G ko:K01785 ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the interconversion of alpha and beta anomers of maltose
IJBIPKIF_01387 0.0 galT 2.7.7.12 - G ko:K00965 ko00052,ko00520,ko01100,ko04917,map00052,map00520,map01100,map04917 ko00000,ko00001,ko00002,ko01000 UDP-glucose--hexose-1-phosphate uridylyltransferase
IJBIPKIF_01388 7.5e-283 galK 2.7.1.6 - F ko:K00849 ko00052,ko00520,ko01100,map00052,map00520,map01100 ko00000,ko00001,ko00002,ko01000,ko04147 Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
IJBIPKIF_01389 9.91e-241 - - - M - - - domain protein
IJBIPKIF_01390 1.51e-145 - - - - - - - -
IJBIPKIF_01391 0.0 lacZ 3.2.1.23 - G ko:K12308 ko00052,map00052 ko00000,ko00001,ko01000 -beta-galactosidase
IJBIPKIF_01392 0.0 lacS - - G ko:K11104,ko:K16209 - ko00000,ko02000 Transporter
IJBIPKIF_01393 3.86e-166 - - - L ko:K07496 - ko00000 Putative transposase DNA-binding domain
IJBIPKIF_01394 2.11e-133 hpt 2.4.2.8 - F ko:K00760 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 ko00000,ko00001,ko01000 Belongs to the purine pyrimidine phosphoribosyltransferase family
IJBIPKIF_01395 0.0 yhdP - - S - - - Transporter associated domain
IJBIPKIF_01396 9.09e-156 - - - C - - - nitroreductase
IJBIPKIF_01397 1.51e-53 - - - - - - - -
IJBIPKIF_01398 5.61e-113 ptbA 2.7.1.208 - G ko:K02755,ko:K02777,ko:K20107,ko:K20108 ko00010,ko00500,ko00520,ko02026,ko02060,ko05111,map00010,map00500,map00520,map02026,map02060,map05111 ko00000,ko00001,ko00002,ko01000,ko02000 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
IJBIPKIF_01399 2.25e-105 - - - - - - - -
IJBIPKIF_01400 1.1e-191 glvR - - K ko:K03481 - ko00000,ko03000 Helix-turn-helix domain, rpiR family
IJBIPKIF_01401 0.0 glvC 2.7.1.208 - G ko:K02749,ko:K02750 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 phosphotransferase system, EIIB
IJBIPKIF_01402 1.35e-196 - - - S - - - hydrolase
IJBIPKIF_01403 5.93e-284 - - - S ko:K07052 - ko00000 CAAX protease self-immunity
IJBIPKIF_01404 8.04e-187 - - - K ko:K07707 ko02020,ko02024,map02020,map02024 ko00000,ko00001,ko00002,ko02022 LytTr DNA-binding domain
IJBIPKIF_01405 7.37e-293 - 2.7.13.3 - T ko:K07706 ko02020,ko02024,map02020,map02024 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 GHKL domain
IJBIPKIF_01406 2.25e-206 - - - S - - - Phospholipase, patatin family
IJBIPKIF_01407 0.0 xfp 4.1.2.22, 4.1.2.9 - G ko:K01621 ko00030,ko00710,ko01100,ko01120,map00030,map00710,map01100,map01120 ko00000,ko00001,ko01000 Phosphoketolase
IJBIPKIF_01408 3.4e-178 - - - K ko:K22103 - ko00000,ko03000 DeoR C terminal sensor domain
IJBIPKIF_01409 7.73e-79 - - - S - - - Enterocin A Immunity
IJBIPKIF_01410 0.0 lmrA 3.6.3.44 - V ko:K02021,ko:K18104 ko01501,ko02010,map01501,map02010 ko00000,ko00001,ko00002,ko01000,ko01504,ko02000 ABC transporter
IJBIPKIF_01411 1.21e-93 - - - K ko:K18909 - ko00000,ko00002,ko01504,ko03000 helix_turn_helix multiple antibiotic resistance protein
IJBIPKIF_01412 2.07e-197 - 3.1.3.102, 3.1.3.104 - S ko:K20861 ko00740,ko01100,ko01110,map00740,map01100,map01110 ko00000,ko00001,ko00002,ko01000 hydrolase
IJBIPKIF_01413 0.0 - - - V - - - ABC transporter transmembrane region
IJBIPKIF_01414 5.7e-146 - - - - - - - -
IJBIPKIF_01415 1.81e-28 - - - - - - - -
IJBIPKIF_01416 1.98e-175 gntR - - K - - - UbiC transcription regulator-associated domain protein
IJBIPKIF_01417 3.51e-223 rihC 3.2.2.1 - F ko:K01239,ko:K01250,ko:K12700 ko00230,ko00760,ko01100,map00230,map00760,map01100 ko00000,ko00001,ko01000 Nucleoside
IJBIPKIF_01418 0.0 kup - - P ko:K03549 - ko00000,ko02000 Transport of potassium into the cell
IJBIPKIF_01419 3.83e-163 rpiA 5.3.1.6 - G ko:K01807 ko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
IJBIPKIF_01420 9.2e-214 rbsK 2.7.1.15 - H ko:K00852 ko00030,map00030 ko00000,ko00001,ko01000 Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
IJBIPKIF_01421 5.34e-211 - - - C - - - Domain of unknown function (DUF4931)
IJBIPKIF_01422 5.02e-313 srrA1 - - G ko:K02027,ko:K17244 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Bacterial extracellular solute-binding protein
IJBIPKIF_01423 2.75e-95 - - - - - - - -
IJBIPKIF_01424 3.66e-224 - - - S - - - Protein of unknown function (DUF2974)
IJBIPKIF_01425 8.28e-143 glnP - - P ko:K10040 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter permease
IJBIPKIF_01426 1.43e-136 glnM - - P ko:K10040 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter permease
IJBIPKIF_01427 4.3e-190 glnH - - ET ko:K10039 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter substrate-binding protein
IJBIPKIF_01428 2.39e-174 glnQ - - E ko:K10041 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ABC transporter, ATP-binding protein
IJBIPKIF_01429 1.92e-148 udk 2.7.1.48 - F ko:K00876 ko00240,ko00983,ko01100,map00240,map00983,map01100 ko00000,ko00001,ko01000 Zeta toxin
IJBIPKIF_01430 8.88e-132 ykoE - - S ko:K16925 - ko00000,ko00002,ko02000 ABC-type cobalt transport system, permease component
IJBIPKIF_01431 0.0 XK27_09605 - - V ko:K18892 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter transmembrane region
IJBIPKIF_01432 0.0 XK27_09600 - - V ko:K06147,ko:K18891 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter, ATP-binding protein
IJBIPKIF_01433 6.57e-102 - - - K - - - Transcriptional regulator, MarR family
IJBIPKIF_01434 2.22e-192 peb1A - - ET ko:K10039 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter
IJBIPKIF_01435 1.4e-188 - - - - - - - -
IJBIPKIF_01436 0.0 ykpA - - S - - - ABC transporter, ATP-binding protein
IJBIPKIF_01437 7.56e-267 pepA - - E - - - M42 glutamyl aminopeptidase
IJBIPKIF_01438 1.11e-212 - - - S ko:K07088 - ko00000 Membrane transport protein
IJBIPKIF_01439 3.81e-274 pmrA - - EGP ko:K08161 - ko00000,ko02000 MFS_1 like family
IJBIPKIF_01440 0.0 qacA - - EGP - - - Major Facilitator
IJBIPKIF_01441 2.03e-67 - 3.1.3.102, 3.1.3.104 - Q ko:K20861 ko00740,ko01100,ko01110,map00740,map01100,map01110 ko00000,ko00001,ko00002,ko01000 phosphatase activity
IJBIPKIF_01442 3.27e-110 - 3.1.3.102, 3.1.3.104 - S ko:K20861 ko00740,ko01100,ko01110,map00740,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Sucrose-6F-phosphate phosphohydrolase
IJBIPKIF_01443 1.39e-118 pyrR 2.4.2.9 - F ko:K02825 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko01000,ko03000 Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
IJBIPKIF_01444 5.36e-305 pyrP - - F ko:K02824 - ko00000,ko02000 Permease
IJBIPKIF_01445 5.81e-165 XK27_08575 - - V ko:K06148 - ko00000,ko02000 cysteine transport
IJBIPKIF_01446 5.13e-141 - - - V ko:K06148 - ko00000,ko02000 ABC-type multidrug transport system, ATPase and permease components
IJBIPKIF_01447 4.73e-206 - 1.1.1.346 - S ko:K06221 - ko00000,ko01000 reductase
IJBIPKIF_01448 3.79e-101 - - - K - - - acetyltransferase
IJBIPKIF_01449 0.0 - 4.2.1.53 - S ko:K10254 - ko00000,ko01000 Myosin-crossreactive antigen
IJBIPKIF_01450 1.25e-118 - - - K - - - Bacterial regulatory proteins, tetR family
IJBIPKIF_01451 1.88e-174 - - - S - - - CAAX protease self-immunity
IJBIPKIF_01452 0.0 qacA - - EGP - - - Major Facilitator
IJBIPKIF_01457 3.49e-123 - - - K - - - Acetyltransferase (GNAT) domain
IJBIPKIF_01458 9.05e-231 - - - L - - - Recombinase zinc beta ribbon domain
IJBIPKIF_01459 3.28e-122 - - - L - - - Resolvase, N terminal domain
IJBIPKIF_01460 2.98e-246 - - - L ko:K06400 - ko00000 Recombinase
IJBIPKIF_01461 2.43e-76 - 5.1.1.13 - M ko:K01779 ko00250,ko01054,map00250,map01054 ko00000,ko00001,ko01000 Asp/Glu/Hydantoin racemase
IJBIPKIF_01462 3.15e-62 - 5.1.1.13 - M ko:K01779 ko00250,ko01054,map00250,map01054 ko00000,ko00001,ko01000 Asp/Glu/Hydantoin racemase
IJBIPKIF_01463 5.16e-146 ung2 - - L - - - Uracil-DNA glycosylase
IJBIPKIF_01464 9.1e-148 fnr - - K ko:K21562 - ko00000,ko03000 Transcriptional regulator, Crp Fnr family
IJBIPKIF_01465 1.05e-124 dpsB - - P - - - Belongs to the Dps family
IJBIPKIF_01466 5.51e-46 - - - C - - - Heavy-metal-associated domain
IJBIPKIF_01467 0.0 cadA 3.6.3.3, 3.6.3.5 - P ko:K01534 - ko00000,ko01000 E1-E2 ATPase
IJBIPKIF_01468 1.48e-82 - - - - - - - -
IJBIPKIF_01469 4.2e-30 - - - - - - - -
IJBIPKIF_01470 0.0 rumA_2 2.1.1.190 - J ko:K03215 - ko00000,ko01000,ko03009 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
IJBIPKIF_01471 1.28e-310 nhaC - - C ko:K03315 - ko00000,ko02000 Na H antiporter NhaC
IJBIPKIF_01472 4.94e-75 - - - - - - - -
IJBIPKIF_01473 8.38e-144 ybhL - - S ko:K06890 - ko00000 Belongs to the BI1 family
IJBIPKIF_01474 2.37e-220 dagK 2.7.1.107 - G ko:K07029 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 ko00000,ko00001,ko01000 Lipid kinase
IJBIPKIF_01475 0.0 gatB 6.3.5.6, 6.3.5.7 - J ko:K02434 ko00970,ko01100,map00970,map01100 ko00000,ko00001,ko01000,ko03029 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
IJBIPKIF_01476 0.0 gatA 6.3.5.6, 6.3.5.7 - J ko:K02433 ko00970,ko01100,map00970,map01100 ko00000,ko00001,ko01000,ko03029 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
IJBIPKIF_01477 4.46e-66 gatC 6.3.5.6, 6.3.5.7 - J ko:K02435 ko00970,ko01100,map00970,map01100 ko00000,ko00001,ko01000,ko03029 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
IJBIPKIF_01478 7.29e-267 camS - - S - - - sex pheromone
IJBIPKIF_01479 0.0 ligA 6.5.1.2 - L ko:K01972 ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430 ko00000,ko00001,ko01000,ko03032,ko03400 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
IJBIPKIF_01480 0.0 pcrA 3.6.4.12 - L ko:K03657 ko03420,ko03430,map03420,map03430 ko00000,ko00001,ko01000,ko03400 ATP-dependent DNA helicase
IJBIPKIF_01481 1.02e-146 acmA 3.2.1.17, 3.2.1.96 - NU ko:K01185,ko:K01227 ko00511,map00511 ko00000,ko00001,ko01000 mannosyl-glycoprotein
IJBIPKIF_01483 6.32e-83 ydcK - - S ko:K03095 - ko00000 Belongs to the SprT family
IJBIPKIF_01484 8.44e-177 - - - M - - - Glycosyltransferase sugar-binding region containing DXD motif
IJBIPKIF_01485 0.0 epsU - - S ko:K03328 - ko00000 Polysaccharide biosynthesis protein
IJBIPKIF_01486 3.89e-288 - - - M - - - CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
IJBIPKIF_01487 0.0 pacL 3.6.3.8 - P ko:K01537 - ko00000,ko01000 P-type ATPase
IJBIPKIF_01488 5.7e-197 nadE 6.3.1.5 - F ko:K01916 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
IJBIPKIF_01489 0.0 pncB 6.3.4.21 - F ko:K00763 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko01000 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
IJBIPKIF_01490 1.85e-264 - - - M - - - Glycosyl transferases group 1
IJBIPKIF_01491 1.39e-171 tagA 2.4.1.187 GT26 F ko:K05946 ko05111,map05111 ko00000,ko00001,ko01000,ko01003 Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
IJBIPKIF_01492 2.13e-92 tagD 2.7.7.39 - IM ko:K00980 ko00564,map00564 ko00000,ko00001,ko01000 Glycerol-3-phosphate cytidylyltransferase
IJBIPKIF_01493 1.33e-160 gntR1 - - K ko:K03710 - ko00000,ko03000 UTRA
IJBIPKIF_01494 5.81e-272 - - - - - - - -
IJBIPKIF_01497 0.0 slpX - - S - - - SLAP domain
IJBIPKIF_01498 6.76e-227 pfoSR - - S ko:K07035 - ko00000 Phosphotransferase system, EIIC
IJBIPKIF_01500 3.18e-92 - - - EGP - - - Major Facilitator
IJBIPKIF_01501 0.0 gtfA 2.4.1.7 GH13 G ko:K00690 ko00500,map00500 ko00000,ko00001,ko01000 Sucrose glucosyltransferase
IJBIPKIF_01502 8.89e-270 msmX - - P ko:K10112 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Belongs to the ABC transporter superfamily
IJBIPKIF_01503 0.0 sacA 3.2.1.26 GH32 G ko:K01193 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 Glycosyl hydrolases family 32
IJBIPKIF_01504 2.93e-199 msmG - - G ko:K02026,ko:K10122 - ko00000,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
IJBIPKIF_01505 1.78e-209 - - - P ko:K10121 - ko00000,ko00002,ko02000 ABC-type sugar transport systems, permease components
IJBIPKIF_01506 0.0 - - - G ko:K02027,ko:K10120 - ko00000,ko00002,ko02000 Bacterial extracellular solute-binding protein
IJBIPKIF_01507 7.11e-236 lacI - - K ko:K02529 - ko00000,ko03000 helix_turn _helix lactose operon repressor
IJBIPKIF_01508 9.11e-69 glpQ1 3.1.4.46 - C ko:K01126 ko00564,map00564 ko00000,ko00001,ko01000 glycerophosphoryl diester phosphodiesterase
IJBIPKIF_01509 9.82e-156 - - - G - - - Antibiotic biosynthesis monooxygenase
IJBIPKIF_01510 2.57e-139 - - - G - - - Histidine phosphatase superfamily (branch 1)
IJBIPKIF_01511 1e-142 - - - G - - - Phosphoglycerate mutase family
IJBIPKIF_01512 3.81e-253 - - - D - - - nuclear chromosome segregation
IJBIPKIF_01513 2.62e-111 - - - M - - - LysM domain protein
IJBIPKIF_01514 4.35e-207 - - - O - - - protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
IJBIPKIF_01515 0.0 licC - - G ko:K02761 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko02000 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
IJBIPKIF_01516 2.6e-19 - - - - - - - -
IJBIPKIF_01517 1.48e-219 pphA 3.1.3.16 - T ko:K07313 - ko00000,ko01000 Calcineurin-like phosphoesterase
IJBIPKIF_01518 3.99e-88 - - - - - - - -
IJBIPKIF_01519 3.99e-45 - - - - - - - -
IJBIPKIF_01520 1.27e-90 - - - S - - - Iron-sulphur cluster biosynthesis
IJBIPKIF_01521 2.79e-296 - - - L - - - Belongs to the 'phage' integrase family
IJBIPKIF_01522 6.89e-06 - - - - - - - -
IJBIPKIF_01523 3.69e-244 - - - EP - - - Plasmid replication protein
IJBIPKIF_01525 2.66e-270 - - - D - - - COG1674 DNA segregation ATPase FtsK SpoIIIE and related proteins
IJBIPKIF_01526 8.66e-76 - - - - - - - -
IJBIPKIF_01528 8.37e-161 - - - V - - - site-specific DNA-methyltransferase (adenine-specific) activity
IJBIPKIF_01529 1.41e-208 - 2.1.1.72 - L ko:K06223 ko03430,map03430 ko00000,ko00001,ko01000,ko02048,ko03032,ko03400 DNA methyltransferase
IJBIPKIF_01530 0.0 - - - S - - - AAA ATPase domain
IJBIPKIF_01531 0.0 - - - L - - - Type III restriction enzyme, res subunit
IJBIPKIF_01533 8.42e-187 nfrA 1.5.1.38 - C ko:K19285 ko00740,ko01100,map00740,map01100 ko00000,ko00001,ko01000 nitroreductase
IJBIPKIF_01534 1.14e-294 amt - - P ko:K03320 - ko00000,ko02000 ammonium transporter
IJBIPKIF_01535 4.47e-81 - - - - - - - -
IJBIPKIF_01536 0.0 - - - L ko:K03724 - ko00000,ko01000,ko03400 DEAD DEAH box helicase
IJBIPKIF_01537 0.0 - - - P - - - P-loop Domain of unknown function (DUF2791)
IJBIPKIF_01538 0.0 - - - S - - - TerB-C domain
IJBIPKIF_01539 0.0 pckA 4.1.1.49 - H ko:K01610 ko00010,ko00020,ko00620,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00710,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Phosphoenolpyruvate carboxykinase
IJBIPKIF_01540 8.15e-94 apfA 3.6.1.61 - F ko:K18445 ko00230,map00230 ko00000,ko00001,ko01000 Nudix hydrolase
IJBIPKIF_01541 1.63e-175 - 4.1.1.44 - S ko:K01607 ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220 ko00000,ko00001,ko01000 Carboxymuconolactone decarboxylase family
IJBIPKIF_01542 1.47e-285 ackA 2.7.2.1 - F ko:K00925 ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
IJBIPKIF_01543 0.0 glmS 2.6.1.16 - M ko:K00820 ko00250,ko00520,ko01100,ko01130,ko04931,map00250,map00520,map01100,map01130,map04931 ko00000,ko00001,ko01000,ko01002 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
IJBIPKIF_01544 0.0 adhE 1.1.1.1, 1.2.1.10 - C ko:K04072 ko00010,ko00071,ko00350,ko00620,ko00625,ko00626,ko00650,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00620,map00625,map00626,map00650,map01100,map01110,map01120,map01130,map01220 ko00000,ko00001,ko01000 belongs to the iron- containing alcohol dehydrogenase family
IJBIPKIF_01545 2.27e-315 aapA - - E ko:K03293,ko:K11737 - ko00000,ko02000 Amino acid permease
IJBIPKIF_01546 3.62e-89 - 2.3.1.79 - S ko:K00661 - ko00000,ko01000 transferase hexapeptide repeat
IJBIPKIF_01547 7.93e-206 - - - K - - - Transcriptional regulator
IJBIPKIF_01548 2.86e-85 - - - S - - - Domain of unknown function (DUF956)
IJBIPKIF_01549 1.18e-225 manN - - G ko:K02796 ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060 ko00000,ko00001,ko00002,ko02000 system, mannose fructose sorbose family IID component
IJBIPKIF_01550 1.67e-181 manY - - G ko:K02746,ko:K02795 ko00051,ko00052,ko00520,ko01100,ko02060,map00051,map00052,map00520,map01100,map02060 ko00000,ko00001,ko00002,ko02000 PTS system
IJBIPKIF_01551 1.36e-241 manL 2.7.1.191 - G ko:K02793,ko:K02794 ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system sorbose subfamily IIB component
IJBIPKIF_01555 2.52e-84 - - - L ko:K07497 - ko00000 PFAM Integrase catalytic region
IJBIPKIF_01556 1.63e-175 - - - L ko:K07483 - ko00000 transposase activity
IJBIPKIF_01557 1.34e-298 - - - L - - - COG3547 Transposase and inactivated derivatives
IJBIPKIF_01558 0.0 cps1C - - S ko:K03328 - ko00000 Membrane protein involved in the export of O-antigen and teichoic acid
IJBIPKIF_01559 7.05e-126 glf 5.4.99.9 - M ko:K01854 ko00052,ko00520,map00052,map00520 ko00000,ko00001,ko01000 UDP-galactopyranose mutase
IJBIPKIF_01560 1.31e-93 glf 5.4.99.9 - M ko:K01854 ko00052,ko00520,map00052,map00520 ko00000,ko00001,ko01000 Flavin containing amine oxidoreductase
IJBIPKIF_01561 1.86e-287 - - - S - - - Psort location CytoplasmicMembrane, score 9.99
IJBIPKIF_01562 7.58e-244 XK27_01805 - - M - - - Glycosyltransferase like family 2
IJBIPKIF_01563 4.69e-158 - - - M - - - transferase activity, transferring glycosyl groups
IJBIPKIF_01565 2.65e-215 - - - S ko:K07011 - ko00000 Glycosyltransferase like family 2
IJBIPKIF_01566 4.02e-192 cps3J - - M - - - Domain of unknown function (DUF4422)
IJBIPKIF_01567 1.77e-159 epsE2 - - M - - - Bacterial sugar transferase
IJBIPKIF_01568 6.17e-191 ywqE 3.1.3.48 - GM ko:K01104 - ko00000,ko01000 PHP domain protein
IJBIPKIF_01569 5.93e-166 ywqD - - D - - - Capsular exopolysaccharide family
IJBIPKIF_01570 1.01e-193 epsB - - M - - - biosynthesis protein
IJBIPKIF_01571 5.44e-235 brpA - - K - - - Cell envelope-like function transcriptional attenuator common domain protein
IJBIPKIF_01572 1.42e-286 hflX - - S ko:K03665 - ko00000,ko03009 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
IJBIPKIF_01573 5.52e-241 - - - S - - - Cysteine-rich secretory protein family
IJBIPKIF_01574 0.0 - - - M - - - Mycoplasma protein of unknown function, DUF285
IJBIPKIF_01575 1.4e-204 - - - M ko:K21471 - ko00000,ko01000,ko01002,ko01011 NlpC/P60 family
IJBIPKIF_01576 2.99e-176 - - - M ko:K21471 - ko00000,ko01000,ko01002,ko01011 NlpC P60 family protein
IJBIPKIF_01577 7.09e-125 - - - M ko:K21471 - ko00000,ko01000,ko01002,ko01011 NlpC/P60 family
IJBIPKIF_01578 6.94e-110 gmk2 2.7.4.8 - F ko:K00942 ko00230,ko01100,map00230,map01100 ko00000,ko00001,ko00002,ko01000 Guanylate kinase homologues.
IJBIPKIF_01579 2.96e-56 - - - - - - - -
IJBIPKIF_01580 0.0 - - - S - - - O-antigen ligase like membrane protein
IJBIPKIF_01581 4.7e-143 - - - - - - - -
IJBIPKIF_01582 7.02e-103 nrdI - - F ko:K03647 - ko00000 NrdI Flavodoxin like
IJBIPKIF_01583 2.71e-233 nrdF 1.17.4.1 - F ko:K00526 ko00230,ko00240,ko01100,map00230,map00240,map01100 ko00000,ko00001,ko00002,ko01000,ko03400 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
IJBIPKIF_01584 1.36e-105 - - - - - - - -
IJBIPKIF_01585 3.7e-175 - - - S - - - Peptidase_C39 like family
IJBIPKIF_01586 1.47e-70 yitW - - S - - - Iron-sulfur cluster assembly protein
IJBIPKIF_01587 1.08e-62 sufB - - O ko:K07033,ko:K09014 - ko00000 assembly protein SufB
IJBIPKIF_01588 1.64e-47 sufC - - O ko:K09013 - ko00000,ko02000 FeS assembly ATPase SufC
IJBIPKIF_01589 4.44e-110 - - - S - - - Threonine/Serine exporter, ThrE
IJBIPKIF_01590 3.8e-176 - - - S - - - Putative threonine/serine exporter
IJBIPKIF_01591 0.0 - - - S - - - ABC transporter
IJBIPKIF_01592 3.08e-81 - - - - - - - -
IJBIPKIF_01593 2.7e-59 rimL - - J ko:K03817 - ko00000,ko01000,ko03009 Acetyltransferase (GNAT) domain
IJBIPKIF_01594 5.01e-293 brpA - - K - - - Cell envelope-like function transcriptional attenuator common domain protein
IJBIPKIF_01595 0.0 pepF - - E ko:K08602 - ko00000,ko01000,ko01002 oligoendopeptidase F
IJBIPKIF_01596 9.86e-59 - - - P ko:K03449 - ko00000,ko02000 transmembrane transport
IJBIPKIF_01597 0.0 lctP - - C ko:K03303 - ko00000,ko02000 L-lactate permease
IJBIPKIF_01598 1.04e-82 - - - S ko:K07006 - ko00000 Pyridoxamine 5'-phosphate oxidase
IJBIPKIF_01599 6.99e-174 znuB - - U ko:K02075,ko:K09816 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC 3 transport family
IJBIPKIF_01600 6.65e-152 adcC - - P ko:K02074,ko:K09817,ko:K11710 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ABC transporter
IJBIPKIF_01601 1.79e-211 - - - P ko:K02077 - ko00000,ko00002,ko02000 Belongs to the bacterial solute-binding protein 9 family
IJBIPKIF_01602 7.83e-60 - - - K ko:K21903 - ko00000,ko03000 helix_turn_helix, Arsenical Resistance Operon Repressor
IJBIPKIF_01603 3e-98 - - - K - - - LytTr DNA-binding domain
IJBIPKIF_01604 4.7e-64 - - - S - - - Protein of unknown function (DUF3021)
IJBIPKIF_01605 0.0 fruA 2.7.1.202 - GT ko:K02768,ko:K02769,ko:K02770 ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 Phosphotransferase System
IJBIPKIF_01606 1.31e-216 pfkB 2.7.1.56 - H ko:K00882 ko00051,map00051 ko00000,ko00001,ko01000 Belongs to the carbohydrate kinase PfkB family. LacC subfamily
IJBIPKIF_01607 3.67e-176 fruR - - K ko:K03436 - ko00000,ko03000 DeoR C terminal sensor domain
IJBIPKIF_01608 5.63e-253 - - - S - - - Fic/DOC family
IJBIPKIF_01609 7.39e-276 natB - - CP ko:K01992 - ko00000,ko00002,ko02000 ABC-2 family transporter protein
IJBIPKIF_01610 1.6e-214 natA - - S ko:K01990 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
IJBIPKIF_01611 2.89e-12 - - - - - - - -
IJBIPKIF_01612 4.14e-89 - - - - - - - -
IJBIPKIF_01613 6.68e-35 - - - - - - - -
IJBIPKIF_01614 6.32e-42 - - - K ko:K07727 - ko00000,ko03000 Transcriptional regulator
IJBIPKIF_01615 9.7e-116 - - - - - - - -
IJBIPKIF_01616 2.26e-29 - - - - - - - -
IJBIPKIF_01621 1.21e-275 blpT - - - - - - -
IJBIPKIF_01622 3.21e-136 mesE - - M ko:K12293,ko:K20345 ko02020,ko02024,map02020,map02024 ko00000,ko00001,ko02000 Transport protein ComB
IJBIPKIF_01623 0.0 comA - - V ko:K06147,ko:K06148,ko:K12292,ko:K20344 ko02010,ko02020,ko02024,map02010,map02020,map02024 ko00000,ko00001,ko01000,ko02000 ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
IJBIPKIF_01626 7.63e-190 - - - K ko:K07707 ko02020,ko02024,map02020,map02024 ko00000,ko00001,ko00002,ko02022 LytTr DNA-binding domain
IJBIPKIF_01627 8.09e-298 - 2.7.13.3 - T ko:K07706 ko02020,ko02024,map02020,map02024 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 GHKL domain
IJBIPKIF_01628 2e-06 - - - - - - - -
IJBIPKIF_01631 2.6e-141 - - - - - - - -
IJBIPKIF_01633 2.71e-136 - - - S ko:K07052 - ko00000 CAAX protease self-immunity
IJBIPKIF_01634 5.21e-275 - - - S ko:K07052 - ko00000 CAAX protease self-immunity
IJBIPKIF_01635 2.62e-50 - - - S - - - Enterocin A Immunity
IJBIPKIF_01636 0.0 agl 3.2.1.20 GH31 G ko:K01187 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 31 family
IJBIPKIF_01637 9.17e-37 - - - - - - - -
IJBIPKIF_01638 1.47e-45 - - - - - - - -
IJBIPKIF_01639 1.4e-69 - - - S - - - Enterocin A Immunity
IJBIPKIF_01640 5.63e-64 - - - S - - - Enterocin A Immunity
IJBIPKIF_01641 7.79e-186 racD 5.1.1.13 - M ko:K01779 ko00250,ko01054,map00250,map01054 ko00000,ko00001,ko01000 Belongs to the aspartate glutamate racemases family
IJBIPKIF_01642 0.0 murE 6.3.2.13, 6.3.2.7 - M ko:K01928,ko:K05362 ko00300,ko00550,ko01100,map00300,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
IJBIPKIF_01643 9.58e-267 - - - T - - - His Kinase A (phosphoacceptor) domain
IJBIPKIF_01644 1.44e-157 vanR - - K - - - response regulator
IJBIPKIF_01645 0.0 ndvA - - V ko:K06147 - ko00000,ko02000 ABC transporter
IJBIPKIF_01646 0.0 - - - V ko:K06147,ko:K06148 - ko00000,ko02000 ABC transporter, ATP-binding protein
IJBIPKIF_01647 1.55e-177 - - - S - - - Protein of unknown function (DUF1129)
IJBIPKIF_01648 1.39e-256 ychF - - J ko:K06942 - ko00000,ko03009 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
IJBIPKIF_01649 2.22e-59 yyzM - - S - - - Bacterial protein of unknown function (DUF951)
IJBIPKIF_01650 2.05e-199 spo0J - - K ko:K03497 - ko00000,ko03000,ko03036,ko04812 Belongs to the ParB family
IJBIPKIF_01651 4.1e-177 soj - - D ko:K03496 - ko00000,ko03036,ko04812 Sporulation initiation inhibitor
IJBIPKIF_01652 2.79e-188 noc - - K ko:K03497 - ko00000,ko03000,ko03036,ko04812 Belongs to the ParB family
IJBIPKIF_01653 3.14e-167 rsmG 2.1.1.170 - J ko:K03501 - ko00000,ko01000,ko03009,ko03036 Specifically methylates the N7 position of a guanine in 16S rRNA
IJBIPKIF_01654 8.5e-105 cvpA - - S - - - Colicin V production protein
IJBIPKIF_01655 6.64e-233 apbE 2.7.1.180 - H ko:K03734 - ko00000,ko01000 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
IJBIPKIF_01656 9.1e-192 - 3.1.3.48 - T ko:K01104 - ko00000,ko01000 Tyrosine phosphatase family
IJBIPKIF_01657 6.34e-127 azr 1.5.1.36 - S ko:K22394 ko00740,ko01100,map00740,map01100 ko00000,ko00001,ko01000 NADPH-dependent FMN reductase
IJBIPKIF_01658 4.14e-126 azo1 1.5.1.36, 1.7.1.6 - S ko:K03206,ko:K19784,ko:K22393 ko00740,ko01100,map00740,map01100 ko00000,ko00001,ko01000 NADPH-dependent FMN reductase
IJBIPKIF_01659 7.21e-143 - - - K - - - WHG domain
IJBIPKIF_01660 2e-26 - - - - - - - -
IJBIPKIF_01661 0.0 pepD4 - - E ko:K08659 - ko00000,ko01000,ko01002 Dipeptidase
IJBIPKIF_01662 3.26e-152 lolD - - V ko:K02003 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
IJBIPKIF_01663 1.43e-231 yxeA - - V ko:K02004 - ko00000,ko00002,ko02000 ABC transporter permease
IJBIPKIF_01664 5.93e-124 - - - K - - - Bacterial regulatory proteins, tetR family
IJBIPKIF_01665 9.98e-146 - - - G - - - phosphoglycerate mutase
IJBIPKIF_01666 1.19e-179 - - - S ko:K06889 - ko00000 Alpha/beta hydrolase family
IJBIPKIF_01667 4.33e-185 XK27_08125 - - S ko:K09861 - ko00000 Belongs to the UPF0246 family
IJBIPKIF_01668 3.44e-153 - - - - - - - -
IJBIPKIF_01669 3.08e-204 - - - C - - - Domain of unknown function (DUF4931)
IJBIPKIF_01670 1.71e-282 - - - S - - - Putative peptidoglycan binding domain
IJBIPKIF_01671 2.13e-36 - - - - - - - -
IJBIPKIF_01672 0.0 dtpT - - U ko:K03305 - ko00000 amino acid peptide transporter
IJBIPKIF_01673 0.0 pepN 3.4.11.2 - E ko:K01256 ko00480,ko01100,map00480,map01100 ko00000,ko00001,ko01000,ko01002 aminopeptidase
IJBIPKIF_01674 7.67e-80 lysM - - M - - - LysM domain
IJBIPKIF_01675 9.68e-226 - - - - - - - -
IJBIPKIF_01676 3e-133 - - - EGP - - - Major Facilitator Superfamily
IJBIPKIF_01677 8.59e-148 mdtG2 - - EGP ko:K08161 - ko00000,ko02000 Transporter, major facilitator family protein
IJBIPKIF_01679 1.97e-280 - - - I - - - transferase activity, transferring acyl groups other than amino-acyl groups
IJBIPKIF_01680 1.53e-118 ymdB - - S - - - Macro domain protein
IJBIPKIF_01681 0.0 nisT - - V ko:K06147,ko:K20485 ko02020,ko02024,map02020,map02024 ko00000,ko00001,ko02000 ABC transporter
IJBIPKIF_01684 2.49e-189 - - - K - - - Helix-turn-helix XRE-family like proteins
IJBIPKIF_01685 2.56e-110 - - - - - - - -
IJBIPKIF_01686 8.05e-197 malG - - P ko:K15772 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter permease
IJBIPKIF_01687 0.0 malF - - P ko:K15771 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
IJBIPKIF_01688 1.35e-282 - - - G ko:K15770 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Bacterial extracellular solute-binding protein
IJBIPKIF_01689 6e-268 msmX - - P ko:K10112 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Belongs to the ABC transporter superfamily
IJBIPKIF_01691 6.9e-220 - - - - - - - -
IJBIPKIF_01692 0.0 ydgH - - S ko:K06994 - ko00000 MMPL family
IJBIPKIF_01693 1.8e-124 yobS - - K - - - Bacterial regulatory proteins, tetR family
IJBIPKIF_01694 2.62e-198 - 3.5.2.6 - V ko:K17836 ko00311,ko01130,ko01501,map00311,map01130,map01501 ko00000,ko00001,ko00002,ko01000,ko01504 Beta-lactamase enzyme family
IJBIPKIF_01695 7.19e-202 corA - - P ko:K03284 - ko00000,ko02000 CorA-like Mg2+ transporter protein
IJBIPKIF_01696 2.47e-309 - - - G ko:K02027 - ko00000,ko00002,ko02000 Bacterial extracellular solute-binding protein
IJBIPKIF_01697 0.0 - - - S - - - Zn-dependent metallo-hydrolase RNA specificity domain
IJBIPKIF_01698 1.68e-188 - - - P ko:K02026 - ko00000,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
IJBIPKIF_01699 1.24e-197 - - - P ko:K02025 - ko00000,ko00002,ko02000 ABC-type sugar transport systems, permease components
IJBIPKIF_01700 9.81e-259 malK - - P ko:K10112,ko:K17240 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ATPases associated with a variety of cellular activities
IJBIPKIF_01701 0.0 pepD1 - - E ko:K08659 - ko00000,ko01000,ko01002 Dipeptidase
IJBIPKIF_01702 4.53e-203 endA - - F ko:K15051 - ko00000 DNA RNA non-specific endonuclease
IJBIPKIF_01703 4e-234 - 2.7.7.7 - L ko:K02342 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 EXOIII
IJBIPKIF_01704 4.72e-200 - - - K - - - NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
IJBIPKIF_01705 7.21e-150 yviA - - S - - - Protein of unknown function (DUF421)
IJBIPKIF_01706 9.54e-97 - - - S - - - Protein of unknown function (DUF3290)
IJBIPKIF_01707 0.0 - - - M - - - domain protein
IJBIPKIF_01708 3.05e-181 pnuC - - H ko:K03811 - ko00000,ko02000 nicotinamide mononucleotide transporter
IJBIPKIF_01709 0.0 - - - - - - - -
IJBIPKIF_01710 7.95e-64 - - - - - - - -
IJBIPKIF_01711 9.1e-184 - - - S - - - PAS domain
IJBIPKIF_01712 0.0 - - - V - - - ABC transporter transmembrane region
IJBIPKIF_01713 5.44e-230 pepR 3.4.11.5 - E ko:K01259 ko00330,map00330 ko00000,ko00001,ko01000,ko01002 Releases the N-terminal proline from various substrates
IJBIPKIF_01714 2.91e-164 - - - T - - - Transcriptional regulatory protein, C terminal
IJBIPKIF_01715 4.14e-312 - - - T - - - GHKL domain
IJBIPKIF_01716 2.36e-112 ykoJ - - S - - - Peptidase propeptide and YPEB domain
IJBIPKIF_01717 1.34e-131 - - - S - - - Peptidase propeptide and YPEB domain
IJBIPKIF_01718 4.9e-100 yybA - - K - - - Transcriptional regulator
IJBIPKIF_01719 3.59e-123 XK27_03150 2.3.1.57 - K ko:K22441 - ko00000,ko01000 Acetyltransferase (GNAT) domain
IJBIPKIF_01720 0.0 oppA - - E ko:K02035,ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter, substratebinding protein
IJBIPKIF_01721 2.28e-72 - - - S ko:K08987 - ko00000 Protein of unknown function (DUF1304)
IJBIPKIF_01722 9.2e-130 - - - S - - - Peptidase propeptide and YPEB domain
IJBIPKIF_01723 8.57e-134 efp - - J ko:K02356 - ko00000,ko03012 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
IJBIPKIF_01724 3.51e-221 coaA 2.7.1.33 - F ko:K00867 ko00770,ko01100,map00770,map01100 ko00000,ko00001,ko00002,ko01000 Pantothenic acid kinase
IJBIPKIF_01725 1.68e-133 - - - E - - - GDSL-like Lipase/Acylhydrolase
IJBIPKIF_01726 1.25e-106 yjcF - - S - - - Acetyltransferase (GNAT) domain
IJBIPKIF_01727 2.71e-193 aatB - - ET ko:K02030 - ko00000,ko00002,ko02000 ABC transporter substrate-binding protein
IJBIPKIF_01728 1.29e-140 glnQ 3.6.3.21 - E ko:K02028 - ko00000,ko00002,ko01000,ko02000 ABC transporter
IJBIPKIF_01729 3e-139 yecS_2 - - P ko:K02029,ko:K02030 - ko00000,ko00002,ko02000 ABC transporter permease
IJBIPKIF_01730 2.14e-31 helD 3.6.4.12 - L ko:K03657 ko03420,ko03430,map03420,map03430 ko00000,ko00001,ko01000,ko03400 DNA helicase
IJBIPKIF_01731 0.0 helD 3.6.4.12 - L ko:K03657 ko03420,ko03430,map03420,map03430 ko00000,ko00001,ko01000,ko03400 DNA helicase
IJBIPKIF_01732 1.69e-160 XK27_08875 - - O - - - PFAM peptidase M10A and M12B, matrixin and adamalysin
IJBIPKIF_01733 7.53e-163 gpm2 - - G - - - Phosphoglycerate mutase family
IJBIPKIF_01734 0.0 - - - V ko:K02004 - ko00000,ko00002,ko02000 FtsX-like permease family
IJBIPKIF_01735 3.02e-174 cysA - - V ko:K02003 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
IJBIPKIF_01736 7.62e-308 - - - S - - - response to antibiotic
IJBIPKIF_01737 1.39e-164 - - - - - - - -
IJBIPKIF_01738 0.0 pacL3 3.6.3.8 - P ko:K01537 - ko00000,ko01000 P-type ATPase
IJBIPKIF_01739 3.66e-85 - 2.7.1.191 - G ko:K02793 ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system fructose IIA component
IJBIPKIF_01740 3.45e-64 - - - - - - - -
IJBIPKIF_01741 1.25e-22 - - - - - - - -
IJBIPKIF_01742 1.35e-238 ansA 3.5.1.1 - EJ ko:K01424 ko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110 ko00000,ko00001,ko01000 L-asparaginase, type I
IJBIPKIF_01743 7.07e-178 - - - K ko:K03481 - ko00000,ko03000 Helix-turn-helix domain, rpiR family
IJBIPKIF_01744 0.0 malH 3.2.1.122 GH4 G ko:K01232 ko00500,map00500 ko00000,ko00001,ko01000 Family 4 glycosyl hydrolase C-terminal domain
IJBIPKIF_01745 8.44e-201 - - - - - - - -
IJBIPKIF_01746 1.6e-119 - - - - - - - -
IJBIPKIF_01747 3.39e-138 - - - K ko:K06977 - ko00000 acetyltransferase
IJBIPKIF_01750 0.0 aspD 4.1.1.12 - E ko:K09758 ko00250,ko00270,ko01100,ko01230,map00250,map00270,map01100,map01230 ko00000,ko00001,ko01000 Aminotransferase
IJBIPKIF_01751 0.0 - - - P ko:K07085 - ko00000 Predicted Permease Membrane Region
IJBIPKIF_01752 5.59e-250 - - - S - - - Domain of unknown function (DUF4767)
IJBIPKIF_01753 1.56e-256 - - - S - - - Membrane
IJBIPKIF_01754 1.71e-191 exoA 3.1.11.2 - L ko:K01142 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 exodeoxyribonuclease III
IJBIPKIF_01755 7.86e-240 - - - K - - - helix_turn_helix, arabinose operon control protein
IJBIPKIF_01756 3.86e-239 - - - K - - - helix_turn_helix, arabinose operon control protein
IJBIPKIF_01757 1.96e-192 yleF - - K - - - Helix-turn-helix domain, rpiR family
IJBIPKIF_01758 1.06e-258 yleB 4.2.1.126 - S ko:K07106,ko:K09963 ko00520,ko01100,map00520,map01100 ko00000,ko00001,ko01000 Bacterial protein of unknown function (DUF871)
IJBIPKIF_01759 1.24e-202 murQ 4.2.1.126 - G ko:K07106 ko00520,ko01100,map00520,map01100 ko00000,ko00001,ko01000 Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
IJBIPKIF_01760 0.0 pts32BC 2.7.1.211 - G ko:K02808,ko:K02809,ko:K02810 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 phosphotransferase system
IJBIPKIF_01761 0.0 - 3.2.1.86 GT1 G ko:K01223 ko00010,ko00500,map00010,map00500 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 1 family
IJBIPKIF_01762 0.0 - - - G ko:K02755,ko:K02756,ko:K02757 ko02060,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 phosphotransferase system
IJBIPKIF_01763 4.37e-205 - - - K ko:K03488 - ko00000,ko03000 CAT RNA binding domain
IJBIPKIF_01764 0.0 - - - M - - - Leucine-rich repeat (LRR) protein
IJBIPKIF_01766 0.0 pulA 3.2.1.41 CBM48,GH13 G ko:K01200 ko00500,ko01100,ko01110,map00500,map01100,map01110 ko00000,ko00001,ko01000 belongs to the glycosyl hydrolase 13 family
IJBIPKIF_01767 4.05e-119 - - - - - - - -
IJBIPKIF_01768 6.91e-235 - - - - - - - -
IJBIPKIF_01769 2.25e-92 - - - S - - - Uncharacterised protein conserved in bacteria (DUF2326)
IJBIPKIF_01770 2.29e-166 - - - K - - - helix_turn_helix, mercury resistance
IJBIPKIF_01771 4.08e-289 pbuG - - S ko:K06901 - ko00000,ko02000 permease
IJBIPKIF_01772 3.14e-226 pepL 3.4.11.5 - E ko:K01259 ko00330,map00330 ko00000,ko00001,ko01000,ko01002 Releases the N-terminal proline from various substrates
IJBIPKIF_01773 0.0 oppA - - E ko:K02035,ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 Bacterial extracellular solute-binding proteins, family 5 Middle
IJBIPKIF_01774 8.03e-289 pbuG - - S ko:K06901 - ko00000,ko02000 permease
IJBIPKIF_01775 2.47e-32 - - - - - - - -
IJBIPKIF_01776 0.0 oppA - - E ko:K02035,ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter, substratebinding protein
IJBIPKIF_01777 6.78e-100 atkY - - K ko:K02171 ko01501,map01501 ko00000,ko00001,ko00002,ko01504,ko03000 Penicillinase repressor
IJBIPKIF_01778 1.77e-85 - - - S - - - Cupredoxin-like domain
IJBIPKIF_01779 1.09e-65 - - - S - - - Cupredoxin-like domain
IJBIPKIF_01780 0.0 copA 3.6.3.3, 3.6.3.5, 3.6.3.54 - P ko:K01534,ko:K17686 ko01524,ko04016,map01524,map04016 ko00000,ko00001,ko01000 P-type ATPase
IJBIPKIF_01781 2.91e-234 - - - S - - - DUF218 domain
IJBIPKIF_01782 6.11e-168 - - - S - - - Mitochondrial biogenesis AIM24
IJBIPKIF_01783 6.65e-153 crp2 - - K ko:K10914,ko:K21562 ko02020,ko02024,ko02025,ko02026,ko05111,map02020,map02024,map02025,map02026,map05111 ko00000,ko00001,ko03000 helix_turn_helix, cAMP Regulatory protein
IJBIPKIF_01784 1.78e-26 - - - - - - - -
IJBIPKIF_01785 5.17e-273 - - - - - - - -
IJBIPKIF_01786 0.0 eriC - - P ko:K03281 - ko00000 chloride
IJBIPKIF_01787 0.0 gnd 1.1.1.343, 1.1.1.44 - H ko:K00033 ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
IJBIPKIF_01788 0.0 pox1 1.2.3.3 - EH ko:K00158 ko00620,ko01100,map00620,map01100 ko00000,ko00001,ko01000 Belongs to the TPP enzyme family
IJBIPKIF_01789 0.0 gidA - - D ko:K03495 - ko00000,ko03016,ko03036 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
IJBIPKIF_01790 0.0 mnmE - - S ko:K03650 - ko00000,ko01000,ko03016 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
IJBIPKIF_01791 2.31e-199 yidC - - U ko:K03217 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044,ko03029 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
IJBIPKIF_01792 1.87e-81 rnpA 3.1.26.5 - J ko:K03536 - ko00000,ko01000,ko03016 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
IJBIPKIF_01793 3.26e-23 rpmH - - J ko:K02914 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL34 family
IJBIPKIF_01794 0.0 dnaA - - L ko:K02313 ko02020,ko04112,map02020,map04112 ko00000,ko00001,ko03032,ko03036 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
IJBIPKIF_01795 1.46e-263 dnaN 2.7.7.7 - L ko:K02338 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
IJBIPKIF_01796 6.15e-47 yaaA - - S ko:K14761 - ko00000,ko03009 S4 domain protein YaaA
IJBIPKIF_01797 3.1e-269 recF - - L ko:K03629 ko03440,map03440 ko00000,ko00001,ko03400 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
IJBIPKIF_01798 0.0 gyrB 5.99.1.3 - L ko:K02470 - ko00000,ko01000,ko03032,ko03400 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
IJBIPKIF_01799 0.0 gyrA 5.99.1.3 - L ko:K02469 - ko00000,ko01000,ko03032,ko03400 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
IJBIPKIF_01800 9.55e-66 rpsF - - J ko:K02990 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011,ko03029 Binds together with S18 to 16S ribosomal RNA
IJBIPKIF_01801 8.43e-110 ssb - - L ko:K03111 ko03030,ko03430,ko03440,map03030,map03430,map03440 ko00000,ko00001,ko03029,ko03032,ko03400 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
IJBIPKIF_01802 1.89e-47 rpsR - - J ko:K02963 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
IJBIPKIF_01803 0.0 yybT - - T - - - signaling protein consisting of a modified GGDEF domain and a DHH domain
IJBIPKIF_01804 6.96e-100 rplI - - J ko:K02939 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds to the 23S rRNA
IJBIPKIF_01805 0.0 dnaB 3.6.4.12 - L ko:K02314 ko03030,ko04112,map03030,map04112 ko00000,ko00001,ko01000,ko03032 Participates in initiation and elongation during chromosome replication
IJBIPKIF_01806 1e-220 phnD - - P ko:K02044 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter, phosphonate, periplasmic substrate-binding protein
IJBIPKIF_01807 1.38e-225 degV1 - - S - - - DegV family
IJBIPKIF_01808 1.09e-215 scrK 2.7.1.4 - GK ko:K00847 ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100 ko00000,ko00001,ko01000 ROK family
IJBIPKIF_01809 1.38e-33 - - - S - - - CsbD-like
IJBIPKIF_01810 1.47e-41 - - - S - - - Transglycosylase associated protein
IJBIPKIF_01811 1.25e-303 - - - I - - - Protein of unknown function (DUF2974)
IJBIPKIF_01813 7.47e-133 cadD - - P - - - Cadmium resistance transporter
IJBIPKIF_01814 2.41e-77 - - - K ko:K21903 - ko00000,ko03000 helix_turn_helix, Arsenical Resistance Operon Repressor
IJBIPKIF_01815 2.93e-235 - - - - - - - -
IJBIPKIF_01816 1.08e-71 - - - - - - - -
IJBIPKIF_01817 7.23e-264 - - - D - - - COG1674 DNA segregation ATPase FtsK SpoIIIE and related proteins
IJBIPKIF_01818 4.15e-120 - - - - - - - -
IJBIPKIF_01819 1.16e-234 - - - EP - - - Plasmid replication protein
IJBIPKIF_01820 1.45e-42 - - - - - - - -
IJBIPKIF_01821 8.39e-299 - - - L - - - Belongs to the 'phage' integrase family
IJBIPKIF_01822 4.37e-43 - - - - - - - -
IJBIPKIF_01823 4.41e-92 doc - - S ko:K07341 - ko00000,ko02048 Fic/DOC family
IJBIPKIF_01824 1.63e-27 - - - S - - - Protein of unknown function (DUF3923)
IJBIPKIF_01827 2.01e-205 - 2.3.1.81 - V ko:K00662 - ko00000,ko01000,ko01504 Aminoglycoside 3-N-acetyltransferase
IJBIPKIF_01828 0.0 - - - E ko:K08659 - ko00000,ko01000,ko01002 Dipeptidase
IJBIPKIF_01829 1.5e-295 - - - S - - - LPXTG cell wall anchor motif
IJBIPKIF_01830 1.4e-196 - - - S - - - Putative ABC-transporter type IV
IJBIPKIF_01831 2.37e-129 - - - S - - - Cob(I)alamin adenosyltransferase
IJBIPKIF_01832 6.12e-112 - - - S ko:K16927 - ko00000,ko00002,ko02000 ECF transporter, substrate-specific component
IJBIPKIF_01833 9.95e-75 - - - S - - - Domain of unknown function (DUF4430)
IJBIPKIF_01834 0.0 rtpR 1.17.4.2 - F ko:K00527 ko00230,ko00240,ko01100,map00230,map00240,map01100 ko00000,ko00001,ko00002,ko01000 ribonucleoside-triphosphate reductase activity
IJBIPKIF_01835 2e-223 ydbI - - K - - - AI-2E family transporter
IJBIPKIF_01836 2.37e-135 - - - E - - - GDSL-like Lipase/Acylhydrolase
IJBIPKIF_01837 9.67e-22 - - - - - - - -
IJBIPKIF_01838 2.79e-313 - - - G ko:K16211 - ko00000,ko02000 Major Facilitator
IJBIPKIF_01839 6.35e-69 - - - - - - - -
IJBIPKIF_01840 8.29e-174 XK27_08845 - - S ko:K05833 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
IJBIPKIF_01841 3.51e-170 XK27_08840 - - U ko:K05832 - ko00000,ko00002,ko02000 Belongs to the binding-protein-dependent transport system permease family
IJBIPKIF_01842 3.82e-229 ABC-SBP - - S ko:K01989 - ko00000,ko00002,ko02000 ABC transporter
IJBIPKIF_01843 1.29e-178 ysaA 3.1.3.5, 3.8.1.2 - S ko:K01560,ko:K07025,ko:K08723 ko00230,ko00240,ko00361,ko00625,ko00760,ko01100,ko01110,ko01120,map00230,map00240,map00361,map00625,map00760,map01100,map01110,map01120 ko00000,ko00001,ko01000 Haloacid dehalogenase-like hydrolase
IJBIPKIF_01844 0.0 fusA1 - - J - - - elongation factor G
IJBIPKIF_01845 1.99e-195 - 3.1.3.102, 3.1.3.104 - S ko:K20861 ko00740,ko01100,ko01110,map00740,map01100,map01110 ko00000,ko00001,ko00002,ko01000 hydrolase
IJBIPKIF_01846 9.66e-41 - - - S - - - endonuclease exonuclease phosphatase family protein
IJBIPKIF_01847 1.63e-172 - - - S - - - endonuclease exonuclease phosphatase family protein
IJBIPKIF_01848 8.28e-15 - - - S - - - interspecies interaction between organisms
IJBIPKIF_01849 5.27e-247 ldhA 1.1.1.28 - C ko:K03778,ko:K18347 ko00620,ko01120,ko01502,ko02020,map00620,map01120,map01502,map02020 ko00000,ko00001,ko00002,ko01000,ko01504 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
IJBIPKIF_01850 3.08e-205 xth 3.1.11.2 - L ko:K01142 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 exodeoxyribonuclease III
IJBIPKIF_01851 0.0 - - - E ko:K20265 ko02024,map02024 ko00000,ko00001,ko02000 amino acid
IJBIPKIF_01852 0.0 - - - L - - - Helicase C-terminal domain protein
IJBIPKIF_01853 3.12e-273 pbpX1 - - V - - - Beta-lactamase
IJBIPKIF_01854 6.19e-94 def2 3.5.1.88 - J ko:K01462 - ko00000,ko01000 Removes the formyl group from the N-terminal Met of newly synthesized proteins
IJBIPKIF_01855 0.0 polA 2.7.7.7 - L ko:K02335 ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440 ko00000,ko00001,ko01000,ko03032,ko03400 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
IJBIPKIF_01856 6.72e-205 fpg 3.2.2.23, 4.2.99.18 - L ko:K10563 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
IJBIPKIF_01857 5.52e-139 coaE 2.7.1.24 - F ko:K00859 ko00770,ko01100,map00770,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
IJBIPKIF_01858 1.29e-106 nrdR - - K ko:K07738 - ko00000,ko03000 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
IJBIPKIF_01859 0.0 dnaB2 - - L ko:K03346 - ko00000,ko03032 Replication initiation and membrane attachment
IJBIPKIF_01860 5.35e-215 dnaI - - L ko:K11144 - ko00000,ko03032 Primosomal protein DnaI
IJBIPKIF_01861 0.0 thrS 6.1.1.3 - J ko:K01868 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
IJBIPKIF_01862 2.67e-96 - - - K - - - LytTr DNA-binding domain
IJBIPKIF_01863 1.39e-92 - - - S - - - Protein of unknown function (DUF3021)
IJBIPKIF_01864 1.92e-118 - - - - - - - -
IJBIPKIF_01865 9.48e-95 infC - - J ko:K02520 - ko00000,ko03012,ko03029 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
IJBIPKIF_01866 2.36e-38 rpmI - - J ko:K02916 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL35 family
IJBIPKIF_01867 4.31e-76 rplT - - J ko:K02887 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
IJBIPKIF_01868 8.82e-241 add 3.5.4.2, 3.5.4.4 - F ko:K01488,ko:K02029,ko:K21053 ko00230,ko01100,ko05340,map00230,map01100,map05340 ko00000,ko00001,ko00002,ko01000,ko02000 Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
IJBIPKIF_01869 4.78e-253 tnpB - - L ko:K07496 - ko00000 Putative transposase DNA-binding domain
IJBIPKIF_01870 1.66e-120 yqeG - - S ko:K07015 - ko00000 HAD phosphatase, family IIIA
IJBIPKIF_01871 4.26e-273 yqeH - - S ko:K06948 - ko00000,ko03009 Ribosome biogenesis GTPase YqeH
IJBIPKIF_01872 8.11e-159 nadD 2.7.7.18 - H ko:K00969 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
IJBIPKIF_01873 4.06e-145 yqeK - - H - - - Hydrolase, HD family
IJBIPKIF_01874 3.58e-78 rsfS - - J ko:K09710 - ko00000,ko03009 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
IJBIPKIF_01875 9.35e-275 ylbM - - S - - - Belongs to the UPF0348 family
IJBIPKIF_01876 3.14e-127 ylbN - - S ko:K07040 - ko00000 Uncharacterized ACR, COG1399
IJBIPKIF_01877 6.08e-164 csrR - - K - - - response regulator
IJBIPKIF_01878 0.0 arlS 2.7.13.3 - T ko:K18940 ko02020,map02020 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Histidine kinase
IJBIPKIF_01879 1.89e-209 yidC - - U ko:K03217 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044,ko03029 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
IJBIPKIF_01880 1.37e-59 acyP 3.6.1.7 - C ko:K01512 ko00620,ko00627,ko01120,map00620,map00627,map01120 ko00000,ko00001,ko01000 Belongs to the acylphosphatase family
IJBIPKIF_01881 3.67e-178 spoU - - J ko:K03437 - ko00000,ko03016 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
IJBIPKIF_01882 1.24e-83 yodB - - K - - - Transcriptional regulator, HxlR family
IJBIPKIF_01883 2.59e-257 pheS 6.1.1.20 - J ko:K01889 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
IJBIPKIF_01884 0.0 pheT 6.1.1.20 - J ko:K01890 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
IJBIPKIF_01885 3.63e-94 greA - - K ko:K03624 - ko00000,ko03021 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
IJBIPKIF_01886 1.6e-217 ldh3 1.1.1.27 - C ko:K00016 ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922 ko00000,ko00001,ko01000,ko04147 lactate/malate dehydrogenase, alpha/beta C-terminal domain
IJBIPKIF_01887 0.0 yqjE 3.4.11.14, 3.4.11.4 - E ko:K01258,ko:K01263 - ko00000,ko01000,ko01002 Cleaves the N-terminal amino acid of tripeptides
IJBIPKIF_01888 3.51e-17 ltrA - - S - - - Bacterial low temperature requirement A protein (LtrA)
IJBIPKIF_01889 1.06e-69 ltrA - - S - - - Bacterial low temperature requirement A protein (LtrA)
IJBIPKIF_01890 0.0 prtB 3.4.21.96 - O ko:K01361 - ko00000,ko01000,ko01002,ko03110 Belongs to the peptidase S8 family
IJBIPKIF_01891 2.46e-218 - - - G - - - BadF/BadG/BcrA/BcrD ATPase family
IJBIPKIF_01892 0.0 - - - S - - - membrane
IJBIPKIF_01893 0.0 pbp2b - - M ko:K00687,ko:K12553,ko:K21465,ko:K21466 ko00550,ko01100,ko01501,map00550,map01100,map01501 ko00000,ko00001,ko01000,ko01011 Penicillin-binding Protein
IJBIPKIF_01894 6.25e-29 rpmG - - J ko:K02913 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL33 family
IJBIPKIF_01895 3.23e-127 fthC 6.3.3.2 - H ko:K01934 ko00670,ko01100,map00670,map01100 ko00000,ko00001,ko01000 Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
IJBIPKIF_01896 4.62e-153 gluP 3.4.21.105 - S ko:K19225 - ko00000,ko01000,ko01002 Rhomboid family
IJBIPKIF_01897 4.01e-44 yqgQ - - S - - - Bacterial protein of unknown function (DUF910)
IJBIPKIF_01898 1.48e-90 yqhL - - P - - - Rhodanese-like protein
IJBIPKIF_01899 8.27e-221 miaA 2.5.1.75 - F ko:K00791 ko00908,ko01100,ko01110,map00908,map01100,map01110 ko00000,ko00001,ko01000,ko01006,ko03016 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
IJBIPKIF_01900 4.04e-304 ynbB - - P - - - aluminum resistance
IJBIPKIF_01901 0.0 glnA 6.3.1.2 - E ko:K01915 ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727 ko00000,ko00001,ko01000,ko04147 glutamine synthetase
IJBIPKIF_01902 7.05e-171 ybbM - - S ko:K02069 - ko00000,ko00002,ko02000 Uncharacterised protein family (UPF0014)
IJBIPKIF_01903 7.72e-152 ybbL - - S ko:K02068 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
IJBIPKIF_01904 5.77e-214 - - - - - - - -
IJBIPKIF_01905 2.37e-210 - - - - - - - -
IJBIPKIF_01908 8.07e-315 lmrB - - U ko:K18926 - ko00000,ko00002,ko02000 Belongs to the major facilitator superfamily
IJBIPKIF_01909 1.12e-287 ackA 2.7.2.1 - F ko:K00925 ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
IJBIPKIF_01910 0.0 glpK3 2.7.1.30 - G ko:K00864 ko00561,ko01100,ko03320,ko04626,map00561,map01100,map03320,map04626 ko00000,ko00001,ko01000,ko04147 FGGY family of carbohydrate kinases, C-terminal domain
IJBIPKIF_01911 2.68e-225 - 2.2.1.1 - G ko:K00615 ko00030,ko00710,ko01051,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01051,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Transketolase, pyrimidine binding domain
IJBIPKIF_01912 5.73e-202 - 2.2.1.1 - G ko:K00615 ko00030,ko00710,ko01051,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01051,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Transketolase, thiamine diphosphate binding domain
IJBIPKIF_01913 9.9e-240 purR13 - - K ko:K02529 - ko00000,ko03000 Bacterial regulatory proteins, lacI family

eggNOG-mapper v2.1.12 (Database: eggNOG v5.0.2, Mar. 2021 release)