ORF_ID e_value Gene_name EC_number CAZy COGs KEGG_ko KEGG_Pathway BRITE Description
GAMIOLLD_00001 9e-64 - - - L ko:K07483 - ko00000 Transposase
GAMIOLLD_00002 2.95e-84 - - - D - - - MobA/MobL family
GAMIOLLD_00003 3.34e-102 - - - - - - - -
GAMIOLLD_00005 3.71e-262 - - - L - - - Transposase and inactivated derivatives IS30 family
GAMIOLLD_00006 0.0 - 3.6.4.12 - K ko:K03655 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Putative ATP-dependent DNA helicase recG C-terminal
GAMIOLLD_00007 0.0 - - - V ko:K01992 - ko00000,ko00002,ko02000 ABC-2 family transporter protein
GAMIOLLD_00008 2.68e-127 - - - V ko:K01992 - ko00000,ko00002,ko02000 ABC-2 family transporter protein
GAMIOLLD_00009 3.68e-230 - - - V ko:K01990 - ko00000,ko00002,ko02000 ATPases associated with a variety of cellular activities
GAMIOLLD_00010 1.06e-57 pacL 3.6.3.8, 3.6.3.9 - P ko:K01537,ko:K01539 ko04022,ko04024,ko04260,ko04261,ko04911,ko04918,ko04919,ko04925,ko04960,ko04961,ko04964,ko04970,ko04971,ko04972,ko04973,ko04974,ko04976,ko04978,map04022,map04024,map04260,map04261,map04911,map04918,map04919,map04925,map04960,map04961,map04964,map04970,map04971,map04972,map04973,map04974,map04976,map04978 ko00000,ko00001,ko01000,ko04147 ATPase, P-type transporting, HAD superfamily, subfamily IC
GAMIOLLD_00011 8.41e-298 - - - T - - - Histidine kinase
GAMIOLLD_00012 1.54e-153 - - - K - - - helix_turn_helix, Lux Regulon
GAMIOLLD_00013 4.91e-150 - - - P ko:K07220 - ko00000 Protein of unknown function DUF47
GAMIOLLD_00014 7.55e-243 pitB - - P ko:K03306 - ko00000 Phosphate transporter family
GAMIOLLD_00015 0.0 xfp 4.1.2.22, 4.1.2.9 - G ko:K01621 ko00030,ko00710,ko01100,ko01120,map00030,map00710,map01100,map01120 ko00000,ko00001,ko01000 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase
GAMIOLLD_00016 0.0 guaA 6.3.5.2 - F ko:K01951 ko00230,ko00983,ko01100,map00230,map00983,map01100 ko00000,ko00001,ko00002,ko01000,ko01002 Catalyzes the synthesis of GMP from XMP
GAMIOLLD_00019 3.68e-68 - - - - - - - -
GAMIOLLD_00020 1.46e-37 - - - - - - - -
GAMIOLLD_00021 8.37e-145 - - - S - - - Protein of unknown function (DUF1294)
GAMIOLLD_00023 6.9e-158 - - - - - - - -
GAMIOLLD_00024 0.0 - - - S - - - Domain of unknown function (DUF1846)
GAMIOLLD_00025 0.0 pta 2.3.1.8 - C ko:K13788 ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 phosphate acetyltransferase
GAMIOLLD_00026 3.98e-296 ackA 2.7.2.1 - H ko:K00925 ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
GAMIOLLD_00027 0.0 aroA 2.5.1.19 - E ko:K00800 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
GAMIOLLD_00028 9.85e-140 pepE 3.4.13.21 - E ko:K05995 - ko00000,ko01000,ko01002 Peptidase family S51
GAMIOLLD_00029 6.39e-173 - - - L - - - Phage integrase family
GAMIOLLD_00031 2.42e-278 - - - - - - - -
GAMIOLLD_00032 0.0 glgX 3.2.1.68 CBM48,GH13 G ko:K01214 ko00500,ko01100,ko01110,map00500,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Belongs to the glycosyl hydrolase 13 family
GAMIOLLD_00033 3.31e-156 - - - L - - - NUDIX domain
GAMIOLLD_00034 1.32e-221 - - - L - - - NIF3 (NGG1p interacting factor 3)
GAMIOLLD_00035 0.0 polA 2.7.7.7 - L ko:K02335 ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440 ko00000,ko00001,ko01000,ko03032,ko03400 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
GAMIOLLD_00036 5.44e-161 pdtaR - - T ko:K22010 - ko00000,ko00002,ko02022 Response regulator receiver domain protein
GAMIOLLD_00038 4.9e-142 aspA 3.6.1.13 - L ko:K01515 ko00230,map00230 ko00000,ko00001,ko01000 NUDIX domain
GAMIOLLD_00039 0.0 pyk 2.7.1.40 - G ko:K00873 ko00010,ko00230,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko04930,ko05165,ko05203,ko05230,map00010,map00230,map00620,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map04930,map05165,map05203,map05230 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Pyruvate kinase
GAMIOLLD_00040 4.13e-230 terC - - P ko:K05794 - ko00000 Integral membrane protein, TerC family
GAMIOLLD_00041 0.0 uvrB - - L ko:K03702 ko03420,map03420 ko00000,ko00001,ko03400 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
GAMIOLLD_00042 2.24e-139 coaE 2.7.1.24 - H ko:K00859 ko00770,ko01100,map00770,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
GAMIOLLD_00043 0.0 rpsA - - J ko:K02945 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal protein S1
GAMIOLLD_00044 2.97e-211 folD 1.5.1.5, 3.5.4.9 - F ko:K01491 ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
GAMIOLLD_00045 1.55e-232 - - - P ko:K02077 - ko00000,ko00002,ko02000 Zinc-uptake complex component A periplasmic
GAMIOLLD_00046 6.96e-211 - - - P ko:K02074 - ko00000,ko00002,ko02000 ATPases associated with a variety of cellular activities
GAMIOLLD_00047 2.15e-177 znuB - - U ko:K02075 - ko00000,ko00002,ko02000 ABC 3 transport family
GAMIOLLD_00048 6.04e-107 ispF 2.7.7.60, 4.6.1.12 - H ko:K01770,ko:K12506 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP)
GAMIOLLD_00049 1.99e-131 carD - - K ko:K07736 - ko00000,ko03000 CarD-like/TRCF domain
GAMIOLLD_00050 0.0 glgB 2.4.1.18 CBM48,GH13 G ko:K00700 ko00500,ko01100,ko01110,map00500,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko04147 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
GAMIOLLD_00051 9.32e-164 cseB - - T - - - Response regulator receiver domain protein
GAMIOLLD_00052 1.69e-258 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
GAMIOLLD_00053 5.32e-92 umuD - - KT ko:K03503 - ko00000,ko01000,ko01002,ko03400 Peptidase S24-like
GAMIOLLD_00054 2.69e-167 pyrE_1 - - S - - - Phosphoribosyl transferase domain
GAMIOLLD_00055 2.33e-200 - - - T - - - Eukaryotic phosphomannomutase
GAMIOLLD_00056 1.05e-85 - - - S - - - Zincin-like metallopeptidase
GAMIOLLD_00057 0.0 - - - - - - - -
GAMIOLLD_00058 0.0 - - - S - - - Glycosyl transferase, family 2
GAMIOLLD_00059 2.82e-72 whiB2 - - K ko:K18955 - ko00000,ko03000 Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA
GAMIOLLD_00060 0.0 lytR2 - - K - - - Cell envelope-related transcriptional attenuator domain
GAMIOLLD_00061 0.0 - - - D ko:K03466 - ko00000,ko03036 FtsK/SpoIIIE family
GAMIOLLD_00062 6.69e-61 whiB - - K ko:K18955 - ko00000,ko03000 Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA
GAMIOLLD_00063 0.0 pdtaS 2.7.13.3 - T ko:K00936 - ko00000,ko00002,ko01000,ko01001,ko02022 ATPase histidine kinase DNA gyrase B HSP90 domain protein
GAMIOLLD_00064 2.77e-193 hlyIII - - S ko:K11068 - ko00000,ko02042 Haemolysin-III related
GAMIOLLD_00065 1.12e-140 - - - - - - - -
GAMIOLLD_00067 1.67e-104 greA - - K ko:K03624 - ko00000,ko03021 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
GAMIOLLD_00068 7.02e-94 fkbP 5.2.1.8 - G ko:K01802 - ko00000,ko01000 Peptidyl-prolyl cis-trans
GAMIOLLD_00069 0.0 sdaA 4.3.1.17 - E ko:K01752 ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230 ko00000,ko00001,ko01000 Serine dehydratase alpha chain
GAMIOLLD_00070 1.47e-124 - - - - - - - -
GAMIOLLD_00072 1.69e-233 ppx 3.6.1.11, 3.6.1.40 - FP ko:K01524 ko00230,map00230 ko00000,ko00001,ko01000 Ppx/GppA phosphatase family
GAMIOLLD_00073 6.25e-138 - - - S ko:K09009 - ko00000 Protein of unknown function (DUF501)
GAMIOLLD_00074 5.95e-131 - - - D - - - Septum formation initiator
GAMIOLLD_00075 7.41e-315 eno 4.2.1.11 - G ko:K01689 ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066 ko00000,ko00001,ko00002,ko01000,ko03019,ko04147 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
GAMIOLLD_00076 2.04e-194 pabC 2.6.1.42, 2.6.1.85, 4.1.3.38 - E ko:K00826,ko:K01665,ko:K02619,ko:K03342 ko00270,ko00280,ko00290,ko00770,ko00790,ko01100,ko01110,ko01130,ko01210,ko01230,map00270,map00280,map00290,map00770,map00790,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 branched-chain-amino-acid transaminase activity
GAMIOLLD_00077 0.0 pabB 2.6.1.85, 4.1.3.27, 4.1.3.38 - EH ko:K01657,ko:K01665,ko:K03342,ko:K13950 ko00400,ko00405,ko00790,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00400,map00405,map00790,map01100,map01110,map01130,map01230,map02024,map02025 ko00000,ko00001,ko00002,ko01000,ko01007 chorismate binding enzyme
GAMIOLLD_00078 0.0 mfd - - L ko:K03723 ko03420,map03420 ko00000,ko00001,ko01000,ko03400 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
GAMIOLLD_00079 3.48e-146 pth 3.1.1.29 - J ko:K01056 - ko00000,ko01000,ko03012 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
GAMIOLLD_00080 8.74e-125 - 2.3.1.183 - M ko:K03823 ko00440,ko01130,map00440,map01130 ko00000,ko00001,ko01000 Acetyltransferase (GNAT) domain
GAMIOLLD_00081 1.97e-186 rfbB2 3.6.3.40 - GM ko:K01990,ko:K09691,ko:K09693 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ABC transporter
GAMIOLLD_00082 1.2e-194 - - - GM ko:K09692 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC-2 type transporter
GAMIOLLD_00083 2.01e-251 - - - GM - - - GDP-mannose 4,6 dehydratase
GAMIOLLD_00084 2.58e-165 ispD 2.7.7.60 - I ko:K00991 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP)
GAMIOLLD_00087 3.27e-277 - - - I ko:K13663 - ko00000,ko01000 transferase activity, transferring acyl groups other than amino-acyl groups
GAMIOLLD_00088 0.0 - 2.7.8.14, 2.7.8.47 - M ko:K18704 - ko00000,ko01000 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
GAMIOLLD_00089 2.04e-263 - 2.7.8.14, 2.7.8.47 - M ko:K18704 - ko00000,ko01000 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
GAMIOLLD_00090 0.0 - - - S ko:K09118 - ko00000 Uncharacterised protein family (UPF0182)
GAMIOLLD_00091 2.68e-292 - 3.2.1.52 - G ko:K01207 ko00520,ko00531,ko01100,ko01501,map00520,map00531,map01100,map01501 ko00000,ko00001,ko00002,ko01000 Glycosyl hydrolase family 3 N-terminal domain protein
GAMIOLLD_00092 1.14e-252 - - - - - - - -
GAMIOLLD_00093 1.7e-194 - - - V ko:K02003,ko:K09810 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ATPases associated with a variety of cellular activities
GAMIOLLD_00094 6.47e-246 - - - V - - - N-Acetylmuramoyl-L-alanine amidase
GAMIOLLD_00095 0.0 argE - - E - - - Peptidase dimerisation domain
GAMIOLLD_00096 2.07e-134 - - - S - - - Protein of unknown function (DUF3043)
GAMIOLLD_00097 0.0 lpdA 1.8.1.4 - C ko:K00382 ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200 br01601,ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
GAMIOLLD_00098 2.47e-181 - - - S - - - Domain of unknown function (DUF4191)
GAMIOLLD_00099 0.0 glnA 6.3.1.2 - E ko:K01915 ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727 ko00000,ko00001,ko01000,ko04147 glutamine synthetase
GAMIOLLD_00102 1.5e-15 - - - D ko:K03466 - ko00000,ko03036 FtsK/SpoIIIE family
GAMIOLLD_00106 1.9e-98 - - - S - - - GIY-YIG catalytic domain
GAMIOLLD_00107 2.5e-39 - 3.1.21.4 - L ko:K01155 - ko00000,ko01000,ko02048 Recognizes the double-stranded sequence CTCGAG and cleaves after C-1
GAMIOLLD_00108 1.9e-137 - - - L - - - Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
GAMIOLLD_00109 7.24e-106 - - - L - - - Phage integrase, N-terminal SAM-like domain
GAMIOLLD_00110 1.43e-203 - - - S - - - Protein conserved in bacteria
GAMIOLLD_00111 2.36e-269 mrp - - D ko:K03593 - ko00000,ko03029,ko03036 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP
GAMIOLLD_00112 0.0 ligA 6.5.1.2 - L ko:K01972 ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430 ko00000,ko00001,ko01000,ko03032,ko03400 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
GAMIOLLD_00113 0.0 - - - S - - - Tetratricopeptide repeat
GAMIOLLD_00114 0.0 - - - M - - - 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
GAMIOLLD_00115 3.85e-98 - 2.8.2.22 - S ko:K01023 - ko00000,ko01000 Arylsulfotransferase Ig-like domain
GAMIOLLD_00116 2.99e-176 - - - P ko:K16784 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ATPases associated with a variety of cellular activities
GAMIOLLD_00117 3.37e-270 - - - E - - - Aminotransferase class I and II
GAMIOLLD_00118 5.64e-179 ppgK 2.7.1.2, 2.7.1.63 - GK ko:K00845,ko:K00886 ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 ROK family
GAMIOLLD_00120 1.39e-135 - - - U - - - Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
GAMIOLLD_00121 0.0 - - - GP ko:K16785,ko:K16786,ko:K16787 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ABC transporter, ATP-binding protein
GAMIOLLD_00122 0.0 - - - EGP - - - Major Facilitator Superfamily
GAMIOLLD_00124 0.0 rarA - - L ko:K07478 - ko00000 Recombination factor protein RarA
GAMIOLLD_00125 0.0 - - - L - - - DEAD DEAH box helicase
GAMIOLLD_00126 2.04e-254 - - - S - - - Polyphosphate kinase 2 (PPK2)
GAMIOLLD_00127 3.8e-252 gluD - - E ko:K10007 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
GAMIOLLD_00128 2.97e-144 gluC - - E ko:K10006 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
GAMIOLLD_00129 1.45e-196 gluB - - ET ko:K10005 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Belongs to the bacterial solute-binding protein 3 family
GAMIOLLD_00130 2.08e-180 gluA - - E ko:K10008 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ATP-binding protein of ABC transporter for glutamate K02028
GAMIOLLD_00131 5.55e-121 - - - S - - - Aminoacyl-tRNA editing domain
GAMIOLLD_00132 2.64e-84 - - - K - - - helix_turn_helix, Lux Regulon
GAMIOLLD_00133 0.0 aspS 6.1.1.12 - J ko:K01876 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
GAMIOLLD_00134 0.0 hisS 6.1.1.21 - J ko:K01892 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Histidyl-tRNA synthetase
GAMIOLLD_00135 1.51e-301 - - - S - - - Domain of Unknown Function (DUF349)
GAMIOLLD_00139 0.0 clpC - - O ko:K03696 ko01100,map01100 ko00000,ko03110 ATPase family associated with various cellular activities (AAA)
GAMIOLLD_00140 3.17e-235 uspA - - T - - - Belongs to the universal stress protein A family
GAMIOLLD_00141 1.28e-252 - - - S - - - Protein of unknown function (DUF3027)
GAMIOLLD_00142 1.23e-87 cspB - - K ko:K03704 - ko00000,ko03000 'Cold-shock' DNA-binding domain
GAMIOLLD_00143 0.0 phoR 2.7.13.3 - T ko:K02484 - ko00000,ko01000,ko01001,ko02022 ATPase histidine kinase DNA gyrase B HSP90 domain protein
GAMIOLLD_00144 1.23e-171 phoP - - KT ko:K02483 - ko00000,ko02022 Response regulator receiver domain protein
GAMIOLLD_00145 5.35e-236 - - - - - - - -
GAMIOLLD_00146 8.25e-53 - - - S - - - Proteins of 100 residues with WXG
GAMIOLLD_00147 0.0 groL - - O ko:K04077 ko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152 ko00000,ko00001,ko03019,ko03029,ko03110,ko04147 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
GAMIOLLD_00148 2.97e-41 cspA - - K ko:K03704 - ko00000,ko03000 'Cold-shock' DNA-binding domain
GAMIOLLD_00149 2.17e-100 - - - S - - - LytR cell envelope-related transcriptional attenuator
GAMIOLLD_00150 1.22e-184 ung 3.2.2.27 - L ko:K03648 ko03410,ko05340,map03410,map05340 ko00000,ko00001,ko01000,ko03400 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
GAMIOLLD_00151 7.38e-253 moxR - - S ko:K03924 - ko00000,ko01000 ATPase family associated with various cellular activities (AAA)
GAMIOLLD_00152 5.64e-229 - - - S - - - Protein of unknown function DUF58
GAMIOLLD_00153 1.78e-121 - - - - - - - -
GAMIOLLD_00154 7.9e-247 - - - S ko:K07114 - ko00000,ko02000 von Willebrand factor (vWF) type A domain
GAMIOLLD_00155 2.85e-198 - - - S ko:K07114 - ko00000,ko02000 von Willebrand factor (vWF) type A domain
GAMIOLLD_00156 2.64e-116 - - - - - - - -
GAMIOLLD_00158 0.0 - - - S - - - PGAP1-like protein
GAMIOLLD_00159 0.0 purB 4.3.2.2 - F ko:K01756 ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Adenylosuccinate lyase C-terminal
GAMIOLLD_00160 0.0 - - - S - - - Lysylphosphatidylglycerol synthase TM region
GAMIOLLD_00161 4.7e-57 hup - - L ko:K03530 - ko00000,ko03032,ko03036,ko03400 Belongs to the bacterial histone-like protein family
GAMIOLLD_00162 0.0 pafA 6.3.1.19 - O ko:K13571 - ko00000,ko00002,ko01000,ko03051 Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine
GAMIOLLD_00163 1.22e-18 pup - - S ko:K13570 - ko00000,ko04121 Protein modifier that is covalently attached to lysine residues of substrate proteins, thereby targeting them for proteasomal degradation. The tagging system is termed pupylation
GAMIOLLD_00164 1.98e-203 - 3.1.3.25 - G ko:K01092 ko00521,ko00562,ko01100,ko04070,map00521,map00562,map01100,map04070 ko00000,ko00001,ko00002,ko01000 Inositol monophosphatase family
GAMIOLLD_00165 0.0 dop 3.5.1.119 - S ko:K20814 - ko00000,ko01000,ko03051 Pup-ligase protein
GAMIOLLD_00166 0.0 arc - - O ko:K13527 ko03050,map03050 ko00000,ko00001,ko00002,ko03051 AAA ATPase forming ring-shaped complexes
GAMIOLLD_00167 7.41e-176 serB 3.1.3.3 - E ko:K01079 ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko01009 haloacid dehalogenase-like hydrolase
GAMIOLLD_00168 3.7e-233 fmt 2.1.2.9 - J ko:K00604 ko00670,ko00970,map00670,map00970 ko00000,ko00001,ko01000 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
GAMIOLLD_00169 3.86e-174 - 3.8.1.2 - S ko:K01560,ko:K07025 ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120 ko00000,ko00001,ko01000 Haloacid dehalogenase-like hydrolase
GAMIOLLD_00170 0.0 priA - - L ko:K04066 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
GAMIOLLD_00171 1.12e-284 metK 2.5.1.6 - H ko:K00789 ko00270,ko01100,ko01110,ko01230,map00270,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
GAMIOLLD_00172 9.87e-70 rpoZ 2.7.7.6 - K ko:K03060 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
GAMIOLLD_00173 0.0 ilvD 4.2.1.9 - H ko:K01687 ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00770,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the IlvD Edd family
GAMIOLLD_00174 2.59e-212 - - - S - - - Protein conserved in bacteria
GAMIOLLD_00175 0.0 acnA 4.2.1.3 - C ko:K01681 ko00020,ko00630,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230 br01601,ko00000,ko00001,ko00002,ko01000 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
GAMIOLLD_00176 0.0 ctpE - - P ko:K12952 - ko00000,ko01000 E1-E2 ATPase
GAMIOLLD_00177 5.73e-143 - - - - - - - -
GAMIOLLD_00178 1.59e-314 rumA 2.1.1.190 - J ko:K03215 - ko00000,ko01000,ko03009 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
GAMIOLLD_00179 5.36e-172 - - - S - - - Protein of unknown function (DUF3159)
GAMIOLLD_00180 2.19e-195 - - - S - - - Protein of unknown function (DUF3710)
GAMIOLLD_00181 2.46e-216 xth 3.1.11.2 - L ko:K01142 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 Endonuclease/Exonuclease/phosphatase family
GAMIOLLD_00182 0.0 - 3.4.22.40 - E ko:K01372 - ko00000,ko01000,ko01002 Peptidase C1-like family
GAMIOLLD_00183 0.0 oppA - - E ko:K02035 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 Bacterial extracellular solute-binding proteins, family 5 Middle
GAMIOLLD_00184 0.0 oppD - - P ko:K02031,ko:K02032 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 Belongs to the ABC transporter superfamily
GAMIOLLD_00185 5.29e-212 oppC - - EP ko:K02034 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 N-terminal TM domain of oligopeptide transport permease C
GAMIOLLD_00186 4.8e-226 oppB1 - - EP ko:K02033 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
GAMIOLLD_00187 3.89e-235 xerC - - D ko:K03733,ko:K04763 - ko00000,ko03036 Belongs to the 'phage' integrase family. XerC subfamily
GAMIOLLD_00188 2.67e-56 - - - - - - - -
GAMIOLLD_00189 4.23e-245 tyrA 1.3.1.12 - E ko:K00210,ko:K04517 ko00400,ko00401,ko01100,ko01110,ko01130,ko01230,map00400,map00401,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Prephenate dehydrogenase
GAMIOLLD_00190 3.53e-254 pheA 4.2.1.51, 5.4.99.5 - E ko:K04518,ko:K14170 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Prephenate dehydratase
GAMIOLLD_00191 1.29e-109 - - - - - - - -
GAMIOLLD_00192 0.0 typA - - T ko:K06207 - ko00000 Elongation factor G C-terminus
GAMIOLLD_00193 8.76e-299 iscS1 2.8.1.7 - E ko:K04487 ko00730,ko01100,ko04122,map00730,map01100,map04122 ko00000,ko00001,ko01000,ko02048,ko03016,ko03029 Aminotransferase class-V
GAMIOLLD_00194 3.33e-211 nadC 2.4.2.19 - H ko:K00767 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko00002,ko01000 Quinolinate phosphoribosyl transferase, N-terminal domain
GAMIOLLD_00195 0.0 nadB 1.4.3.16, 2.4.2.19 - H ko:K00278,ko:K00767 ko00250,ko00760,ko01100,map00250,map00760,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the oxidation of L-aspartate to iminoaspartate
GAMIOLLD_00196 0.0 nadA 2.5.1.72 - H ko:K03517 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
GAMIOLLD_00197 5.17e-192 - 3.6.1.55 - F ko:K03574 - ko00000,ko01000,ko03400 NUDIX hydrolase
GAMIOLLD_00198 6.08e-145 scpB - - D ko:K06024 - ko00000,ko03036 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
GAMIOLLD_00199 2.39e-193 scpA - - D ko:K05896 - ko00000,ko03036 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
GAMIOLLD_00200 7.59e-194 soj - - D ko:K03496 - ko00000,ko03036,ko04812 CobQ CobB MinD ParA nucleotide binding domain protein
GAMIOLLD_00201 9.33e-226 xerD - - D ko:K03733,ko:K04763 - ko00000,ko03036 recombinase XerD
GAMIOLLD_00202 5.46e-81 rplT - - J ko:K02887 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
GAMIOLLD_00203 3.31e-35 rpmI - - J ko:K02916 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal protein L35
GAMIOLLD_00204 3.07e-137 infC - - J ko:K02520 - ko00000,ko03012,ko03029 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
GAMIOLLD_00205 6.67e-10 - - - S - - - Spermine/spermidine synthase domain
GAMIOLLD_00206 9.85e-12 - - - S - - - Spermine/spermidine synthase domain
GAMIOLLD_00207 6.59e-170 - 2.7.6.2 - H ko:K00949 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko01000 Thiamin pyrophosphokinase, vitamin B1 binding domain
GAMIOLLD_00208 3.39e-254 gap 1.2.1.12 - G ko:K00134 ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
GAMIOLLD_00209 1.16e-87 ybaK - - J ko:K03976 - ko00000,ko01000,ko03016 Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
GAMIOLLD_00210 9.3e-231 ispH 1.17.7.4 - IM ko:K03527 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
GAMIOLLD_00211 6.49e-249 - 5.1.3.3 - G ko:K01785 ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130 ko00000,ko00001,ko00002,ko01000 Aldose 1-epimerase
GAMIOLLD_00212 3.35e-84 - - - - - - - -
GAMIOLLD_00213 4.05e-148 sigH - - K ko:K03088 - ko00000,ko03021 Belongs to the sigma-70 factor family. ECF subfamily
GAMIOLLD_00214 0.0 murE 6.3.2.13 - M ko:K01928 ko00300,ko00550,map00300,map00550 ko00000,ko00001,ko01000,ko01011 Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
GAMIOLLD_00215 5.99e-243 - - - V - - - Acetyltransferase (GNAT) domain
GAMIOLLD_00216 5.6e-292 - 2.6.1.33 - M ko:K20429 - ko00000,ko01000 DegT/DnrJ/EryC1/StrS aminotransferase family
GAMIOLLD_00217 3.61e-309 - 6.3.1.12 - S ko:K17810 - ko00000,ko01000 ATP-grasp
GAMIOLLD_00218 1.46e-165 - 5.1.1.13 - G ko:K01779 ko00250,ko01054,map00250,map01054 ko00000,ko00001,ko01000 Belongs to the aspartate glutamate racemases family
GAMIOLLD_00219 0.0 smc - - D ko:K03529 - ko00000,ko03036 Required for chromosome condensation and partitioning
GAMIOLLD_00220 0.0 folC 6.3.2.12, 6.3.2.17 - H ko:K11754 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko00002,ko01000 Mur ligase middle domain
GAMIOLLD_00222 3.73e-126 - - - F - - - NUDIX domain
GAMIOLLD_00223 0.0 pepP 3.4.11.9 - E ko:K01262 - ko00000,ko01000,ko01002 Aminopeptidase P, N-terminal domain
GAMIOLLD_00224 0.0 - - - P ko:K02031,ko:K02032 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 Belongs to the ABC transporter superfamily
GAMIOLLD_00225 1.52e-248 dppC - - EP ko:K02034 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
GAMIOLLD_00226 5.3e-243 dppB - - EP ko:K02033 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
GAMIOLLD_00227 0.0 - - - E ko:K02035 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 Bacterial extracellular solute-binding proteins, family 5 Middle
GAMIOLLD_00228 4.41e-309 nagA 3.5.1.25 - G ko:K01443 ko00520,ko01130,map00520,map01130 ko00000,ko00001,ko01000 Amidohydrolase family
GAMIOLLD_00229 5.93e-196 nagB 3.5.99.6 - G ko:K02564 ko00520,ko01100,map00520,map01100 ko00000,ko00001,ko01000 Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
GAMIOLLD_00230 5.86e-276 - - - GK - - - ROK family
GAMIOLLD_00231 1.39e-168 cutC - - P ko:K06201 - ko00000 Participates in the control of copper homeostasis
GAMIOLLD_00232 5.33e-286 - 2.7.1.2 - GK ko:K00845 ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 ROK family
GAMIOLLD_00233 2.87e-217 - 2.7.1.4 - G ko:K00847 ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100 ko00000,ko00001,ko01000 pfkB family carbohydrate kinase
GAMIOLLD_00234 5.3e-301 - - - G - - - Major Facilitator Superfamily
GAMIOLLD_00235 2.9e-109 dtd - - J ko:K07560 - ko00000,ko01000,ko03016 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
GAMIOLLD_00238 7.49e-235 ftsQ - - D ko:K03589 ko04112,map04112 ko00000,ko00001,ko03036 Cell division protein FtsQ
GAMIOLLD_00239 0.0 murC 6.3.2.8 - M ko:K01924 ko00471,ko00550,ko01100,map00471,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Belongs to the MurCDEF family
GAMIOLLD_00240 4.28e-274 murG 2.4.1.227, 6.3.2.8 GT28 M ko:K01924,ko:K02563 ko00471,ko00550,ko01100,ko01502,ko04112,map00471,map00550,map01100,map01502,map04112 ko00000,ko00001,ko01000,ko01011 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
GAMIOLLD_00241 1.35e-298 ftsW 2.4.1.227 GT28 D ko:K02563,ko:K03588 ko00550,ko01100,ko01502,ko04112,map00550,map01100,map01502,map04112 ko00000,ko00001,ko01000,ko01011,ko02000,ko03036 Belongs to the SEDS family
GAMIOLLD_00242 0.0 murD 6.3.2.9 - M ko:K01925 ko00471,ko00550,ko01100,map00471,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
GAMIOLLD_00243 8.76e-261 mraY 2.7.8.13 - M ko:K01000 ko00550,ko01100,ko01502,map00550,map01100,map01502 ko00000,ko00001,ko01000,ko01011 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
GAMIOLLD_00244 0.0 murF 6.3.2.10 - M ko:K01929 ko00300,ko00550,ko01100,ko01502,map00300,map00550,map01100,map01502 ko00000,ko00001,ko01000,ko01011 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
GAMIOLLD_00245 2.48e-231 - - - M - - - Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
GAMIOLLD_00246 0.0 ftsI 3.4.16.4 - M ko:K03587 ko00550,ko01501,map00550,map01501 ko00000,ko00001,ko01000,ko01011,ko03036 Penicillin-binding protein, transpeptidase domain protein
GAMIOLLD_00247 1.96e-97 - - - D - - - Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
GAMIOLLD_00248 3.08e-246 rsmH 2.1.1.199 - J ko:K03438 - ko00000,ko01000,ko03009 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
GAMIOLLD_00249 8.85e-118 mraZ - - K ko:K03925 - ko00000 Belongs to the MraZ family
GAMIOLLD_00250 0.0 - - - L - - - DNA helicase
GAMIOLLD_00251 3.93e-291 serA 1.1.1.399, 1.1.1.95 - EH ko:K00058 ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko04147 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
GAMIOLLD_00252 1.79e-107 nrdR - - K ko:K07738 - ko00000,ko03000 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
GAMIOLLD_00253 3.42e-65 - - - M - - - Lysin motif
GAMIOLLD_00254 3.03e-166 lexA 3.4.21.88 - K ko:K01356 - ko00000,ko00002,ko01000,ko01002,ko03400 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
GAMIOLLD_00255 8.75e-210 czcD - - P ko:K16264 - ko00000,ko02000 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
GAMIOLLD_00256 1.96e-226 ldh 1.1.1.27, 1.1.1.37 - C ko:K00016,ko:K00024 ko00010,ko00020,ko00270,ko00620,ko00630,ko00640,ko00680,ko00710,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko04922,map00010,map00020,map00270,map00620,map00630,map00640,map00680,map00710,map00720,map01100,map01110,map01120,map01130,map01200,map04922 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the LDH MDH superfamily. LDH family
GAMIOLLD_00257 0.0 hflX - - S ko:K03665 - ko00000,ko03009 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
GAMIOLLD_00258 4.62e-224 - - - - - - - -
GAMIOLLD_00259 5.07e-157 rsmC 2.1.1.172 - J ko:K00564 - ko00000,ko01000,ko03009 Ribosomal protein L11 methyltransferase (PrmA)
GAMIOLLD_00260 0.0 hrpA 3.6.4.13 - L ko:K03578 - ko00000,ko01000 Helicase associated domain (HA2) Add an annotation
GAMIOLLD_00261 1.71e-241 - - - M - - - Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses
GAMIOLLD_00263 0.0 - - - S - - - Domain of unknown function (DUF5067)
GAMIOLLD_00264 0.0 glnA2 6.3.1.2 - E ko:K01915 ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727 ko00000,ko00001,ko01000,ko04147 glutamine synthetase
GAMIOLLD_00265 0.0 - - - S - - - Uncharacterized protein conserved in bacteria (DUF2252)
GAMIOLLD_00266 8.32e-168 hisA 5.3.1.16, 5.3.1.24 - E ko:K01814,ko:K01817 ko00340,ko00400,ko01100,ko01110,ko01130,ko01230,map00340,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Histidine biosynthesis protein
GAMIOLLD_00267 3.31e-157 hisH - - E ko:K02501 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
GAMIOLLD_00268 8.75e-150 - - - - - - - -
GAMIOLLD_00269 1.08e-145 hisB 3.1.3.15, 4.2.1.19 - E ko:K01089,ko:K01693 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Imidazoleglycerol-phosphate dehydratase
GAMIOLLD_00270 1.85e-285 hisC 2.6.1.9 - E ko:K00817 ko00340,ko00350,ko00360,ko00400,ko00401,ko00960,ko01100,ko01110,ko01130,ko01230,map00340,map00350,map00360,map00400,map00401,map00960,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
GAMIOLLD_00271 0.0 hisD 1.1.1.23 - E ko:K00013 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
GAMIOLLD_00272 2.68e-232 - - - S - - - Protein conserved in bacteria
GAMIOLLD_00275 1.5e-100 - - - S - - - Domain of unknown function (DUF4186)
GAMIOLLD_00276 1.31e-217 dkgV - - C - - - Aldo/keto reductase family
GAMIOLLD_00277 5.5e-199 - - - S - - - Aldo/keto reductase family
GAMIOLLD_00278 2.05e-257 - - - K - - - WYL domain
GAMIOLLD_00280 0.0 - 4.2.1.53 - S ko:K10254 - ko00000,ko01000 MCRA family
GAMIOLLD_00281 1.34e-62 - - - J ko:K07574 - ko00000,ko03009 CRS1_YhbY
GAMIOLLD_00282 1.07e-163 - - - S - - - zinc-ribbon domain
GAMIOLLD_00283 0.0 dnaE 2.7.7.7 - L ko:K02337 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase III alpha subunit
GAMIOLLD_00284 4.54e-53 cscA 3.2.1.26 GH32 G ko:K01193 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 32 family
GAMIOLLD_00285 1.2e-19 fosC 3.2.1.26 GH32 G ko:K01193 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 32 family
GAMIOLLD_00286 1.65e-245 - - - S - - - Domain of unknown function (DUF1963)
GAMIOLLD_00287 4.19e-197 uppS 2.5.1.31, 2.5.1.86, 2.5.1.88 - H ko:K00806,ko:K14215,ko:K21273 ko00900,ko01110,map00900,map01110 ko00000,ko00001,ko01000,ko01006 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
GAMIOLLD_00288 5.03e-183 recO - - L ko:K03584 ko03440,map03440 ko00000,ko00001,ko03400 Involved in DNA repair and RecF pathway recombination
GAMIOLLD_00289 0.0 - - - I - - - acetylesterase activity
GAMIOLLD_00290 4.85e-299 ispG 1.17.7.1, 1.17.7.3 - I ko:K03526 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
GAMIOLLD_00291 2.16e-282 dxr 1.1.1.267 - I ko:K00099 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP)
GAMIOLLD_00292 7.14e-316 - - - NU - - - Tfp pilus assembly protein FimV
GAMIOLLD_00294 8.09e-31 - - - - - - - -
GAMIOLLD_00295 8.4e-27 - - - - - - - -
GAMIOLLD_00296 2.2e-183 - 5.4.99.28, 5.4.99.29 - J ko:K06177 - ko00000,ko01000,ko03009,ko03016 RNA pseudouridylate synthase
GAMIOLLD_00297 1.38e-103 smpB - - J ko:K03664 - ko00000 the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
GAMIOLLD_00298 2.15e-284 - - - D ko:K21471 - ko00000,ko01000,ko01002,ko01011 CHAP domain protein
GAMIOLLD_00299 2.48e-202 ftsX - - D ko:K09811 ko02010,map02010 ko00000,ko00001,ko00002,ko02000,ko03036 Part of the ABC transporter FtsEX involved in cellular division
GAMIOLLD_00300 2.02e-306 ftsE - - D ko:K09812 ko02010,map02010 ko00000,ko00001,ko00002,ko02000,ko03036 Cell division ATP-binding protein FtsE
GAMIOLLD_00301 5.51e-263 prfB - - J ko:K02836 - ko00000,ko03012 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
GAMIOLLD_00302 1.07e-219 dapD 2.3.1.117 - E ko:K00674 ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2- amino-6-oxopimelate using succinyl-CoA
GAMIOLLD_00303 1.25e-82 - - - - - - - -
GAMIOLLD_00305 2.68e-225 rluD 5.4.99.23 - J ko:K06180 - ko00000,ko01000,ko03009 Responsible for synthesis of pseudouridine from uracil
GAMIOLLD_00306 9.28e-148 lspA 3.4.23.36 - MU ko:K03101 ko03060,map03060 ko00000,ko00001,ko01000,ko01002 This protein specifically catalyzes the removal of signal peptides from prolipoproteins
GAMIOLLD_00307 1.65e-191 - - - V - - - DivIVA protein
GAMIOLLD_00308 7.81e-56 - - - S ko:K02221 - ko00000,ko02044 YGGT family
GAMIOLLD_00309 9.4e-105 sepF - - D ko:K09772 - ko00000,ko03036 Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
GAMIOLLD_00310 8.03e-295 ftsZ - - D ko:K03531 ko04112,map04112 ko00000,ko00001,ko02048,ko03036,ko04812 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
GAMIOLLD_00311 4.69e-314 dus - - J - - - Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
GAMIOLLD_00312 0.0 glyQS 6.1.1.14 - J ko:K01880 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Catalyzes the attachment of glycine to tRNA(Gly)
GAMIOLLD_00313 0.0 - 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 Domain of unknown function (DUF4982)
GAMIOLLD_00314 1.23e-202 thiM 2.7.1.50 - H ko:K00878 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
GAMIOLLD_00315 0.0 thiC 4.1.99.17 - H ko:K03147 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
GAMIOLLD_00316 1.62e-110 - - - - - - - -
GAMIOLLD_00317 3.43e-291 - - - O ko:K13525 ko04141,ko05134,map04141,map05134 ko00000,ko00001,ko00002,ko03019,ko04131,ko04147 AAA domain (Cdc48 subfamily)
GAMIOLLD_00318 7.27e-211 thiD 2.7.1.49, 2.7.4.7 - H ko:K00941 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko00002,ko01000 Phosphomethylpyrimidine kinase
GAMIOLLD_00319 1.52e-81 - - - S - - - Thiamine-binding protein
GAMIOLLD_00320 1.61e-247 - - - K ko:K02529 - ko00000,ko03000 helix_turn _helix lactose operon repressor
GAMIOLLD_00321 2.24e-86 - - - S - - - Protein of unknown function (DUF3052)
GAMIOLLD_00322 4.82e-192 sdrC - - T ko:K07177 ko02024,map02024 ko00000,ko00001,ko01002 Belongs to the peptidase S16 family
GAMIOLLD_00323 0.0 - - - S - - - Zincin-like metallopeptidase
GAMIOLLD_00324 0.0 uvrD2 3.6.4.12 - L ko:K03657 ko03420,ko03430,map03420,map03430 ko00000,ko00001,ko01000,ko03400 DNA helicase
GAMIOLLD_00325 0.0 mphA - - S - - - Aminoglycoside phosphotransferase
GAMIOLLD_00326 9.31e-44 - - - S - - - Protein of unknown function (DUF3107)
GAMIOLLD_00327 4.22e-212 PPA1328 3.1.3.97, 3.1.4.57 - S ko:K07053,ko:K20859 ko00440,map00440 ko00000,ko00001,ko01000 DNA polymerase alpha chain like domain
GAMIOLLD_00328 4.62e-145 - - - S - - - Vitamin K epoxide reductase
GAMIOLLD_00329 2.98e-215 dapF 5.1.1.7 - E ko:K01778 ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine
GAMIOLLD_00330 5.27e-194 murI 5.1.1.3 - M ko:K01776 ko00471,ko01100,map00471,map01100 ko00000,ko00001,ko01000,ko01011 Provides the (R)-glutamate required for cell wall biosynthesis
GAMIOLLD_00331 4.37e-218 - - - S - - - Patatin-like phospholipase
GAMIOLLD_00332 0.0 - - - V ko:K06147 - ko00000,ko02000 ABC transporter transmembrane region
GAMIOLLD_00333 0.0 - - - V ko:K06147 - ko00000,ko02000 ABC transporter, ATP-binding protein
GAMIOLLD_00334 9.99e-130 - - - K - - - MarR family
GAMIOLLD_00335 0.0 - - - M - - - Parallel beta-helix repeats
GAMIOLLD_00336 0.0 egtA 6.3.2.2 - H ko:K01919 ko00270,ko00480,ko01100,map00270,map00480,map01100 ko00000,ko00001,ko00002,ko01000 Glutamate-cysteine ligase family 2(GCS2)
GAMIOLLD_00337 1.07e-210 - - - - - - - -
GAMIOLLD_00338 0.0 hgdC - - I - - - CoA enzyme activase uncharacterised domain (DUF2229)
GAMIOLLD_00340 8.4e-179 nrdG 1.97.1.4 - O ko:K04068 - ko00000,ko01000 Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
GAMIOLLD_00341 0.0 nrdD 1.1.98.6 - F ko:K21636 ko00230,ko00240,ko01100,map00230,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Anaerobic ribonucleoside-triphosphate reductase
GAMIOLLD_00342 0.0 xseA 3.1.11.6 - L ko:K03601 ko03430,map03430 ko00000,ko00001,ko01000,ko03400 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
GAMIOLLD_00343 1.47e-56 xseB 3.1.11.6 - L ko:K03602 ko03430,map03430 ko00000,ko00001,ko01000,ko03400 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
GAMIOLLD_00344 1.48e-219 - - - S ko:K18353 ko01502,ko02020,map01502,map02020 ko00000,ko00001,ko00002,ko01504 Endonuclease/Exonuclease/phosphatase family
GAMIOLLD_00346 2.73e-233 - 3.2.2.1 - F ko:K01239 ko00230,ko00760,ko01100,map00230,map00760,map01100 ko00000,ko00001,ko01000 Inosine-uridine preferring nucleoside hydrolase
GAMIOLLD_00347 0.0 - - - OP - - - Sulfurtransferase TusA
GAMIOLLD_00348 8.74e-193 thiF 2.7.7.73, 2.7.7.80, 2.8.1.11 - H ko:K03148,ko:K21147 ko00730,ko01100,ko04122,map00730,map01100,map04122 ko00000,ko00001,ko01000 ThiF family
GAMIOLLD_00349 4.8e-171 tmp1 - - S - - - Domain of unknown function (DUF4391)
GAMIOLLD_00350 1.01e-61 ppx1 3.6.1.11, 3.6.1.40 - FP ko:K01524 ko00230,map00230 ko00000,ko00001,ko01000 Ppx/GppA phosphatase family
GAMIOLLD_00351 7.65e-293 aspB 2.6.1.1 - E ko:K00812 ko00220,ko00250,ko00270,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko01000,ko01007 Aminotransferase class-V
GAMIOLLD_00352 2.06e-160 vsr - - L ko:K07458 - ko00000,ko01000,ko03400 May nick specific sequences that contain T G mispairs resulting from m5C-deamination
GAMIOLLD_00353 0.0 - - - S - - - zinc finger
GAMIOLLD_00354 6.43e-160 def 3.5.1.88 - J ko:K01462 - ko00000,ko01000 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
GAMIOLLD_00355 0.0 glmM 5.4.2.10 - G ko:K03431 ko00520,ko01100,ko01130,map00520,map01100,map01130 ko00000,ko00001,ko01000 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
GAMIOLLD_00356 0.0 vpr - - O - - - Subtilase family
GAMIOLLD_00357 0.0 pepN 3.4.11.2 - E ko:K01256,ko:K08776 ko00480,ko01100,map00480,map01100 ko00000,ko00001,ko01000,ko01002 Peptidase family M1 domain
GAMIOLLD_00358 0.0 rnj - - J ko:K12574 ko03018,map03018 ko00000,ko00001,ko01000,ko03019 An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
GAMIOLLD_00359 6.97e-208 dapA 4.3.3.7 - E ko:K01714 ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
GAMIOLLD_00360 2.35e-169 dapB 1.17.1.8 - E ko:K00215 ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
GAMIOLLD_00361 4.27e-47 - - - L - - - Transposase
GAMIOLLD_00362 3.22e-33 - - - L ko:K07473 - ko00000,ko02048 RelB antitoxin
GAMIOLLD_00364 1.24e-86 gsiA - - P ko:K02031,ko:K02032,ko:K12371,ko:K13892 ko02010,ko02024,map02010,map02024 ko00000,ko00001,ko00002,ko02000 Belongs to the ABC transporter superfamily
GAMIOLLD_00365 0.0 - - - G - - - Major Facilitator Superfamily
GAMIOLLD_00366 2.36e-187 - - - K - - - -acetyltransferase
GAMIOLLD_00367 0.0 uvrD2 3.6.4.12 - L ko:K03657 ko03420,ko03430,map03420,map03430 ko00000,ko00001,ko01000,ko03400 Belongs to the helicase family. UvrD subfamily
GAMIOLLD_00368 0.0 - - - L - - - PD-(D/E)XK nuclease superfamily
GAMIOLLD_00369 0.0 pknK 2.7.11.1 - KLT ko:K12132 - ko00000,ko01000,ko01001 Protein tyrosine kinase
GAMIOLLD_00370 0.0 - - - S - - - Fibronectin type 3 domain
GAMIOLLD_00371 0.0 - - - S ko:K03924 - ko00000,ko01000 ATPase family associated with various cellular activities (AAA)
GAMIOLLD_00372 1.58e-299 - - - S - - - Protein of unknown function DUF58
GAMIOLLD_00373 0.0 - - - E - - - Transglutaminase-like superfamily
GAMIOLLD_00374 5.53e-210 - 3.1.3.16 - T ko:K20074 - ko00000,ko01000,ko01009 Sigma factor PP2C-like phosphatases
GAMIOLLD_00375 5.65e-101 - - - B - - - Belongs to the OprB family
GAMIOLLD_00376 1.08e-123 - - - T - - - Forkhead associated domain
GAMIOLLD_00377 0.0 rpoC 2.7.7.6 - K ko:K03046 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
GAMIOLLD_00378 0.0 rpoB 2.7.7.6 - K ko:K03043 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
GAMIOLLD_00379 1.86e-142 - - - - - - - -
GAMIOLLD_00380 3.15e-236 mutY - - L ko:K03575 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 FES
GAMIOLLD_00381 4e-57 - 3.2.1.35 - G ko:K01197 ko00531,ko01100,map00531,map01100 ko00000,ko00001,ko00002,ko00536,ko00537,ko01000,ko02042 Putative cell wall binding repeat
GAMIOLLD_00382 5.27e-156 spoU 2.1.1.207 - J ko:K03216 - ko00000,ko01000,ko03016 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
GAMIOLLD_00383 7.75e-56 - - - - - - - -
GAMIOLLD_00384 0.0 - - - S ko:K09157 - ko00000 UPF0210 protein
GAMIOLLD_00385 3.23e-58 - - - T ko:K07166 - ko00000 Belongs to the UPF0237 family
GAMIOLLD_00386 1.32e-308 - - - EGP - - - Sugar (and other) transporter
GAMIOLLD_00387 2.4e-296 galK 2.7.1.6, 2.7.7.12 - G ko:K00849,ko:K00965 ko00052,ko00520,ko01100,ko04917,map00052,map00520,map01100,map04917 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the GHMP kinase family. GalK subfamily
GAMIOLLD_00388 0.0 galT 2.7.7.12 - C ko:K00965 ko00052,ko00520,ko01100,ko04917,map00052,map00520,map01100,map04917 ko00000,ko00001,ko00002,ko01000 Galactose-1-phosphate uridyl transferase, N-terminal domain
GAMIOLLD_00389 7e-186 - - - K - - - DeoR C terminal sensor domain
GAMIOLLD_00390 8.16e-289 pyrD 1.3.5.2, 1.3.98.1 - F ko:K00226,ko:K00254 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor
GAMIOLLD_00391 6.1e-277 namA - - C - - - NADH:flavin oxidoreductase / NADH oxidase family
GAMIOLLD_00392 0.0 pon1 - - M - - - Transglycosylase
GAMIOLLD_00393 4.67e-173 crp - - K ko:K10914 ko02020,ko02024,ko02025,ko02026,ko05111,map02020,map02024,map02025,map02026,map05111 ko00000,ko00001,ko03000 helix_turn_helix, cAMP Regulatory protein
GAMIOLLD_00394 6.41e-300 lplA 6.3.1.20 - H ko:K03800 ko00785,ko01100,map00785,map01100 ko00000,ko00001,ko01000 Biotin/lipoate A/B protein ligase family
GAMIOLLD_00395 4.22e-244 leuB 1.1.1.85 - CE ko:K00052 ko00290,ko00660,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map01100,map01110,map01210,map01230 br01601,ko00000,ko00001,ko00002,ko01000 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate
GAMIOLLD_00396 0.0 ptrB 3.4.21.83 - E ko:K01354 ko05142,ko05143,map05142,map05143 ko00000,ko00001,ko01000,ko01002 Peptidase, S9A B C family, catalytic domain protein
GAMIOLLD_00397 0.0 - - - S - - - Uncharacterized conserved protein (DUF2183)
GAMIOLLD_00398 2.17e-93 gcvH - - E ko:K02437 ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200 ko00000,ko00001,ko00002 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein
GAMIOLLD_00399 0.0 - - - S - - - L,D-transpeptidase catalytic domain
GAMIOLLD_00401 1.77e-157 nudC 3.6.1.22 - L ko:K03426 ko00760,ko01100,ko04146,map00760,map01100,map04146 ko00000,ko00001,ko01000 NADH pyrophosphatase zinc ribbon domain
GAMIOLLD_00402 2.42e-204 - - - I - - - Alpha/beta hydrolase family
GAMIOLLD_00403 3.88e-152 - - - F - - - Domain of unknown function (DUF4916)
GAMIOLLD_00404 3.65e-78 trxA 1.8.1.9 - O ko:K00384,ko:K03671 ko00450,ko04621,ko05418,map00450,map04621,map05418 ko00000,ko00001,ko01000,ko03110 Belongs to the thioredoxin family
GAMIOLLD_00405 2.49e-230 - - - S ko:K21688 - ko00000 G5
GAMIOLLD_00406 0.0 - - - - - - - -
GAMIOLLD_00408 1.2e-131 - - - K - - - cell envelope-related transcriptional attenuator
GAMIOLLD_00409 6.65e-18 - - - L - - - Transposase
GAMIOLLD_00411 0.0 tgt 2.4.2.29 - F ko:K00773 - ko00000,ko01000,ko03016 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
GAMIOLLD_00412 0.0 degP - - O ko:K08372 ko02020,map02020 ko00000,ko00001,ko01000,ko01002 Domain present in PSD-95, Dlg, and ZO-1/2.
GAMIOLLD_00413 0.0 - 3.6.3.4, 3.6.3.54 - P ko:K01533,ko:K17686 ko01524,ko04016,map01524,map04016 ko00000,ko00001,ko01000 E1-E2 ATPase
GAMIOLLD_00414 0.0 fprA 1.18.1.2, 1.19.1.1 - C ko:K00528 - ko00000,ko01000 Pyridine nucleotide-disulphide oxidoreductase
GAMIOLLD_00415 9.97e-218 htpX - - O ko:K03799 - ko00000,ko00002,ko01000,ko01002 Belongs to the peptidase M48B family
GAMIOLLD_00417 0.0 - 3.6.4.12 - K ko:K03655 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Putative ATP-dependent DNA helicase recG C-terminal
GAMIOLLD_00418 5.58e-52 - - - S - - - Bacterial mobilisation protein (MobC)
GAMIOLLD_00419 3.76e-163 - - - S - - - Domain of unknown function (DUF4417)
GAMIOLLD_00420 4.04e-86 - - - S - - - Psort location Cytoplasmic, score 8.87
GAMIOLLD_00422 3.15e-29 - - - L ko:K07482 - ko00000 IS30 family
GAMIOLLD_00423 3.48e-254 ugd 1.1.1.22 - M ko:K00012 ko00040,ko00053,ko00520,ko01100,map00040,map00053,map00520,map01100 ko00000,ko00001,ko00002,ko01000 UDP binding domain
GAMIOLLD_00424 1.47e-244 - - - M - - - Glycosyltransferase like family 2
GAMIOLLD_00425 0.0 - - - M ko:K07272 - ko00000,ko01000,ko01003,ko01005 Rhamnan synthesis protein F
GAMIOLLD_00426 0.0 - - - S - - - Tetratricopeptide repeat
GAMIOLLD_00427 2.18e-266 - - - GM ko:K01990 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
GAMIOLLD_00428 5.96e-167 tagG - - U ko:K01992 - ko00000,ko00002,ko02000 Transport permease protein
GAMIOLLD_00429 1.48e-214 rfbA 2.7.7.24 - H ko:K00973 ko00521,ko00523,ko00525,ko01130,map00521,map00523,map00525,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
GAMIOLLD_00430 4.48e-136 - - - EGP ko:K08217 - br01600,ko00000,ko01504,ko02000 Transmembrane secretion effector
GAMIOLLD_00431 0.0 - - - U - - - Drug resistance MFS transporter, drug H antiporter-2 family
GAMIOLLD_00432 1.1e-16 - - - - - - - -
GAMIOLLD_00433 2.17e-24 yccF - - S - - - Inner membrane component domain
GAMIOLLD_00434 0.0 - - - S ko:K07133 - ko00000 Domain of unknown function (DUF4143)
GAMIOLLD_00435 3.74e-206 ermA 2.1.1.184 - J ko:K00561 - br01600,ko00000,ko01000,ko01504,ko03009 Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family
GAMIOLLD_00436 1.38e-143 - - - - - - - -
GAMIOLLD_00437 5.6e-205 - - - L ko:K07493 - ko00000 PFAM Transposase, Mutator family
GAMIOLLD_00438 4.36e-199 - 2.7.1.95 - F ko:K00897 - ko00000,ko01000,ko01504 Phosphotransferase enzyme family
GAMIOLLD_00439 0.0 - - - L - - - PFAM Integrase catalytic
GAMIOLLD_00440 1.11e-289 - - - L - - - Transposase and inactivated derivatives
GAMIOLLD_00441 1.47e-38 ureD - - O ko:K03190 - ko00000 Required for maturation of urease via the functional incorporation of the urease nickel metallocenter
GAMIOLLD_00442 3.47e-18 cbiM - - P ko:K02007 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 PDGLE domain
GAMIOLLD_00443 5.26e-130 - - - - - - - -
GAMIOLLD_00444 5.71e-257 mutT 3.6.1.55 - LT ko:K03574 - ko00000,ko01000,ko03400 Phosphoglycerate mutase family
GAMIOLLD_00445 0.0 ppk 2.7.4.1 - P ko:K00937 ko00190,ko03018,map00190,map03018 ko00000,ko00001,ko01000,ko03019 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
GAMIOLLD_00447 1.34e-196 - - - D - - - bacterial-type flagellum organization
GAMIOLLD_00448 5.54e-243 cpaF - - U ko:K02283 - ko00000,ko02035,ko02044 Type II IV secretion system protein
GAMIOLLD_00449 6.16e-156 - - - U ko:K12510 - ko00000,ko02044 Type ii secretion system
GAMIOLLD_00451 1.3e-20 - - - NU - - - Type II secretion system (T2SS), protein F
GAMIOLLD_00452 1.13e-54 - - - S - - - Protein of unknown function (DUF4244)
GAMIOLLD_00453 1.28e-73 - - - U - - - TadE-like protein
GAMIOLLD_00454 2.09e-72 - - - S - - - TIGRFAM helicase secretion neighborhood TadE-like protein
GAMIOLLD_00455 1.61e-274 - 2.7.1.107 - I ko:K07029 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 ko00000,ko00001,ko01000 Diacylglycerol kinase catalytic domain protein
GAMIOLLD_00456 0.0 dnaX 2.7.7.7 - L ko:K02343 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase III subunit gamma tau
GAMIOLLD_00457 1.21e-142 recR - - L ko:K06187 ko03440,map03440 ko00000,ko00001,ko03400 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
GAMIOLLD_00458 2.68e-175 ask 2.7.2.4 - E ko:K00928 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Amino acid kinase family
GAMIOLLD_00459 9.6e-125 ask 2.7.2.4 - E ko:K00928 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 ACT domain
GAMIOLLD_00461 9.23e-270 asd 1.2.1.11 - E ko:K00133 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
GAMIOLLD_00462 1.77e-148 - - - - - - - -
GAMIOLLD_00463 0.0 - 2.7.11.1 - S ko:K12132 - ko00000,ko01000,ko01001 PASTA domain
GAMIOLLD_00465 0.0 - - - S - - - Calcineurin-like phosphoesterase
GAMIOLLD_00466 0.0 leuA 2.3.3.13 - E ko:K01649 ko00290,ko00620,ko01100,ko01110,ko01210,ko01230,map00290,map00620,map01100,map01110,map01210,map01230 br01601,ko00000,ko00001,ko00002,ko01000 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
GAMIOLLD_00467 0.0 pbp5 - - M - - - Transglycosylase
GAMIOLLD_00469 5.17e-295 glf 5.4.99.9 - M ko:K01854 ko00052,ko00520,map00052,map00520 ko00000,ko00001,ko01000 UDP-galactopyranose mutase
GAMIOLLD_00470 9.41e-175 - - - S ko:K11068 - ko00000,ko02042 Haemolysin-III related
GAMIOLLD_00471 0.0 - - - M - - - PA domain
GAMIOLLD_00472 1.87e-250 - - - I - - - PAP2 superfamily
GAMIOLLD_00473 0.0 topA 5.99.1.2 - L ko:K03168 - ko00000,ko01000,ko03032,ko03400 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
GAMIOLLD_00474 3.07e-153 tmk 2.7.4.9 - F ko:K00943 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
GAMIOLLD_00475 4.26e-272 holB 2.7.7.7 - L ko:K02341 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase III
GAMIOLLD_00476 8.04e-257 - - - K ko:K02529 - ko00000,ko03000 helix_turn _helix lactose operon repressor
GAMIOLLD_00477 1.47e-50 hpr - - G ko:K11189 - ko00000,ko02000 PTS HPr component phosphorylation site
GAMIOLLD_00478 0.0 ptsI 2.7.3.9 - G ko:K08483 ko02060,map02060 ko00000,ko00001,ko01000,ko02000 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
GAMIOLLD_00479 4.58e-154 - - - S - - - Fic/DOC family
GAMIOLLD_00480 5.61e-254 - 2.7.1.180 - H ko:K03734 - ko00000,ko01000 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
GAMIOLLD_00481 1.33e-12 - - - G - - - MFS/sugar transport protein
GAMIOLLD_00482 0.0 - - - P ko:K07243 - ko00000,ko02000 Iron permease FTR1 family
GAMIOLLD_00483 4.8e-150 - - - P ko:K07230 - ko00000,ko02000 Fe2+ transport protein
GAMIOLLD_00484 5.03e-295 - - - S - - - Predicted membrane protein (DUF2318)
GAMIOLLD_00485 3.23e-289 - - - V ko:K02004 - ko00000,ko00002,ko02000 ABC transporter permease
GAMIOLLD_00486 6.18e-274 - - - V ko:K02004 - ko00000,ko00002,ko02000 FtsX-like permease family
GAMIOLLD_00487 6.37e-190 - - - V ko:K02003 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
GAMIOLLD_00488 1.34e-101 - - - S - - - FMN_bind
GAMIOLLD_00489 1.96e-163 - - - K ko:K03489,ko:K03710 - ko00000,ko03000 UTRA
GAMIOLLD_00490 2.39e-05 - - - S - - - haloacid dehalogenase-like hydrolase
GAMIOLLD_00491 8.04e-21 - - - S - - - haloacid dehalogenase-like hydrolase
GAMIOLLD_00492 0.0 - - - G ko:K02761 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko02000 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
GAMIOLLD_00493 5.95e-65 - 2.7.1.196, 2.7.1.205 - G ko:K02760 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system, Lactose/Cellobiose specific IIB subunit
GAMIOLLD_00494 1.06e-65 - 2.7.1.196, 2.7.1.205 - G ko:K02759 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system, Lactose/Cellobiose specific IIA subunit
GAMIOLLD_00495 0.0 - 3.2.1.86 GT1 G ko:K01223 ko00010,ko00500,map00010,map00500 ko00000,ko00001,ko01000 Glycosyl hydrolase family 1
GAMIOLLD_00496 1.82e-45 - - - Q - - - phosphatase activity
GAMIOLLD_00497 1.3e-102 - - - - - - - -
GAMIOLLD_00498 6.98e-302 - - - S - - - Putative ABC-transporter type IV
GAMIOLLD_00499 1.72e-209 - - - S - - - Sucrose-6F-phosphate phosphohydrolase
GAMIOLLD_00502 4.95e-228 - 3.4.22.70 - M ko:K07284 - ko00000,ko01000,ko01002,ko01011 Sortase family
GAMIOLLD_00503 2.64e-269 - - - M ko:K20276 ko02024,map02024 ko00000,ko00001 chlorophyll binding
GAMIOLLD_00504 4.98e-244 - - - M ko:K20276 ko02024,map02024 ko00000,ko00001 chlorophyll binding
GAMIOLLD_00505 0.0 - - - M - - - LPXTG cell wall anchor motif
GAMIOLLD_00507 3.8e-105 - - - K - - - Winged helix DNA-binding domain
GAMIOLLD_00508 0.0 - - - V ko:K06147 - ko00000,ko02000 ABC transporter, ATP-binding protein
GAMIOLLD_00509 0.0 - - - V ko:K06147 - ko00000,ko02000 ABC transporter transmembrane region
GAMIOLLD_00510 9.95e-108 - - - - - - - -
GAMIOLLD_00511 4.08e-89 - - - P ko:K16785 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Cobalt transport protein
GAMIOLLD_00512 0.0 - - - E ko:K08659 - ko00000,ko01000,ko01002 Peptidase family C69
GAMIOLLD_00513 0.0 - - - S - - - Glycosyl hydrolases related to GH101 family, GH129
GAMIOLLD_00514 1.88e-252 - 2.7.8.12 - M ko:K09809 - ko00000,ko01000 Glycosyltransferase like family 2
GAMIOLLD_00515 1.36e-171 icaR - - K - - - Bacterial regulatory proteins, tetR family
GAMIOLLD_00517 3.29e-265 ftsY - - U ko:K03110 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
GAMIOLLD_00518 2.1e-305 amt - - U ko:K03320 - ko00000,ko02000 Ammonium Transporter Family
GAMIOLLD_00519 2.56e-72 glnB - - K ko:K04751 ko02020,map02020 ko00000,ko00001 Nitrogen regulatory protein P-II
GAMIOLLD_00520 0.0 glnD 2.7.7.59 - O ko:K00990 ko02020,map02020 ko00000,ko00001,ko01000 Nucleotidyltransferase domain
GAMIOLLD_00522 2.15e-314 dinF - - V - - - MatE
GAMIOLLD_00523 0.0 dnaB 3.6.4.12 - L ko:K02314 ko03030,ko04112,map03030,map04112 ko00000,ko00001,ko01000,ko03032 Participates in initiation and elongation during chromosome replication
GAMIOLLD_00524 0.0 murE - - M - - - Domain of unknown function (DUF1727)
GAMIOLLD_00525 4.16e-181 cobQ2 - - S ko:K07009 - ko00000 CobB/CobQ-like glutamine amidotransferase domain
GAMIOLLD_00526 2.47e-41 - - - S - - - granule-associated protein
GAMIOLLD_00527 0.0 - - - S ko:K03688 - ko00000 ABC1 family
GAMIOLLD_00528 0.0 - 3.6.3.4, 3.6.3.54 - P ko:K01533,ko:K17686 ko01524,ko04016,map01524,map04016 ko00000,ko00001,ko01000 E1-E2 ATPase
GAMIOLLD_00529 6.68e-57 csoR - - S ko:K21600 - ko00000,ko03000 Metal-sensitive transcriptional repressor
GAMIOLLD_00530 2.4e-296 rmuC - - S ko:K09760 - ko00000 RmuC family
GAMIOLLD_00531 8.27e-163 pyrE1 - - F - - - Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
GAMIOLLD_00532 5.56e-213 trmH 2.1.1.34 - J ko:K00556 - ko00000,ko01000,ko03016 RNA methyltransferase TrmH family
GAMIOLLD_00533 2.61e-52 - - - V ko:K01990 - ko00000,ko00002,ko02000 ABC transporter
GAMIOLLD_00534 6.61e-79 - - - V ko:K01990 - ko00000,ko00002,ko02000 ABC transporter
GAMIOLLD_00535 3.33e-64 gatC 6.3.5.6, 6.3.5.7 - J ko:K02435 ko00970,ko01100,map00970,map01100 ko00000,ko00001,ko01000,ko03029 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
GAMIOLLD_00536 0.0 gatA 6.3.5.6, 6.3.5.7 - F ko:K02433 ko00970,ko01100,map00970,map01100 ko00000,ko00001,ko01000,ko03029 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
GAMIOLLD_00537 0.0 gatB 6.3.5.6, 6.3.5.7 - J ko:K02434 ko00970,ko01100,map00970,map01100 ko00000,ko00001,ko01000,ko03029 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
GAMIOLLD_00538 1.96e-251 - - - J - - - Acetyltransferase (GNAT) domain
GAMIOLLD_00539 6.51e-69 - - - S - - - Protein of unknown function (DUF2469)
GAMIOLLD_00540 0.0 - - - H - - - Flavin containing amine oxidoreductase
GAMIOLLD_00541 0.0 rho - - K ko:K03628 ko03018,map03018 ko00000,ko00001,ko03019,ko03021 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
GAMIOLLD_00542 4.15e-298 - 2.6.1.1, 2.6.1.2, 2.6.1.66 - E ko:K00812,ko:K08969,ko:K10907,ko:K14260 ko00220,ko00250,ko00270,ko00290,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00290,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Aminotransferase class I and II
GAMIOLLD_00543 8.96e-117 lrp_3 - - K ko:K03719 - ko00000,ko03000,ko03036 helix_turn_helix ASNC type
GAMIOLLD_00544 9.37e-96 tyrA 5.4.99.5 - E ko:K04092 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Chorismate mutase type II
GAMIOLLD_00545 0.0 - - - S - - - domain protein
GAMIOLLD_00546 0.0 valS 6.1.1.9 - J ko:K01873 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
GAMIOLLD_00547 0.0 - - - E ko:K02035 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 Bacterial extracellular solute-binding proteins, family 5 Middle
GAMIOLLD_00548 4.88e-161 nth 4.2.99.18 - L ko:K10773 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
GAMIOLLD_00549 5.57e-175 glnR - - KT - - - Transcriptional regulatory protein, C terminal
GAMIOLLD_00550 5.6e-170 - - - - - - - -
GAMIOLLD_00551 5.53e-132 mntP - - P - - - Probably functions as a manganese efflux pump
GAMIOLLD_00553 1.13e-118 ppa 3.6.1.1 - C ko:K01507 ko00190,map00190 ko00000,ko00001,ko01000 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
GAMIOLLD_00554 0.0 glgE 2.4.99.16 GH13 G ko:K16147 ko00500,ko01100,map00500,map01100 ko00000,ko00001,ko01000 Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1- 4)- glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB
GAMIOLLD_00555 0.0 - - - K - - - RNA polymerase II activating transcription factor binding
GAMIOLLD_00556 9.17e-59 - - - - - - - -
GAMIOLLD_00558 2.94e-265 metAA 2.3.1.46 - E ko:K00651 ko00270,ko00920,ko01100,ko01110,ko01230,map00270,map00920,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
GAMIOLLD_00559 3.54e-188 atpB - - C ko:K02108 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194,ko03110 it plays a direct role in the translocation of protons across the membrane
GAMIOLLD_00561 1.21e-40 atpE - - C ko:K02110 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
GAMIOLLD_00562 7.5e-98 atpF - - C ko:K02109 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
GAMIOLLD_00563 1.62e-191 atpH - - C ko:K02109,ko:K02113 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
GAMIOLLD_00564 0.0 atpA 3.6.3.14 - C ko:K02111 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194,ko01000 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
GAMIOLLD_00565 2.73e-213 atpG - - C ko:K02115 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
GAMIOLLD_00566 0.0 atpD 3.6.3.14 - C ko:K02112 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194,ko01000 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
GAMIOLLD_00567 1.39e-66 atpC - - C ko:K02114 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 Produces ATP from ADP in the presence of a proton gradient across the membrane
GAMIOLLD_00568 3.84e-169 nucS - - L ko:K07503 - ko00000,ko01000 Cleaves both 3' and 5' ssDNA extremities of branched DNA structures
GAMIOLLD_00569 8.27e-187 - - - QT - - - PucR C-terminal helix-turn-helix domain
GAMIOLLD_00570 0.0 - - - - - - - -
GAMIOLLD_00571 3.07e-192 birA 6.3.4.15 - H ko:K03524 ko00780,ko01100,map00780,map01100 ko00000,ko00001,ko01000,ko03000 Biotin/lipoate A/B protein ligase family
GAMIOLLD_00572 2.14e-119 bioY - - S ko:K03523 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 BioY family
GAMIOLLD_00573 0.0 accC 6.3.4.14, 6.4.1.2, 6.4.1.3 - I ko:K11263 ko00061,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200,map01212 ko00000,ko00001,ko00002,ko01000 Carbamoyl-phosphate synthase L chain, ATP binding domain protein
GAMIOLLD_00574 0.0 pccB - - I - - - Carboxyl transferase domain
GAMIOLLD_00575 0.0 fas - - I ko:K11533 ko00061,ko01100,ko01212,ko04931,map00061,map01100,map01212,map04931 ko00000,ko00001,ko00002,ko01000,ko01004 Beta-ketoacyl synthase, C-terminal domain
GAMIOLLD_00576 1.95e-128 acpS 2.7.8.7 - I ko:K00997 ko00770,map00770 ko00000,ko00001,ko01000 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
GAMIOLLD_00577 3.31e-204 birA 6.3.4.15 - H ko:K03524 ko00780,ko01100,map00780,map01100 ko00000,ko00001,ko01000,ko03000 Biotin/lipoate A/B protein ligase family
GAMIOLLD_00579 0.0 - 3.2.1.35 - G ko:K01197 ko00531,ko01100,map00531,map01100 ko00000,ko00001,ko00002,ko00536,ko00537,ko01000,ko02042 beta-N-acetylglucosaminidase
GAMIOLLD_00580 9.01e-155 - - - - - - - -
GAMIOLLD_00581 8.32e-56 rpsO - - J ko:K02956 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
GAMIOLLD_00582 0.0 pnp 2.7.7.8 - J ko:K00962 ko00230,ko00240,ko03018,map00230,map00240,map03018 ko00000,ko00001,ko00002,ko01000,ko03016,ko03019 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction
GAMIOLLD_00583 5.09e-123 xylR - - K ko:K02529 - ko00000,ko03000 purine nucleotide biosynthetic process
GAMIOLLD_00584 8.8e-120 lemA - - S ko:K03744 - ko00000 LemA family
GAMIOLLD_00585 0.0 - - - S - - - Predicted membrane protein (DUF2207)
GAMIOLLD_00586 3.03e-92 megL 4.4.1.11 - E ko:K01761 ko00270,ko00450,map00270,map00450 ko00000,ko00001,ko01000 Cys/Met metabolism PLP-dependent enzyme
GAMIOLLD_00587 7.28e-243 nrdF 1.17.4.1 - F ko:K00526 ko00230,ko00240,ko01100,map00230,map00240,map01100 ko00000,ko00001,ko00002,ko01000,ko03400 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
GAMIOLLD_00589 0.0 nrdE 1.17.4.1 - F ko:K00525 ko00230,ko00240,ko01100,map00230,map00240,map01100 ko00000,ko00001,ko00002,ko01000,ko03400 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
GAMIOLLD_00590 8.18e-127 nrdI - - F ko:K03647 - ko00000 Probably involved in ribonucleotide reductase function
GAMIOLLD_00591 1.26e-55 nrdH - - O ko:K06191 - ko00000 Glutaredoxin
GAMIOLLD_00592 6.85e-214 - - - C - - - Oxidoreductase, aldo keto reductase family protein
GAMIOLLD_00593 6.22e-114 - - - L - - - Transposase and inactivated derivatives IS30 family
GAMIOLLD_00594 0.0 - - - O ko:K08303 ko05120,map05120 ko00000,ko00001,ko01000,ko01002 Peptidase family U32 C-terminal domain
GAMIOLLD_00595 6.72e-242 yfiH - - Q ko:K05810 - ko00000,ko01000 Multi-copper polyphenol oxidoreductase laccase
GAMIOLLD_00596 1.28e-185 ispD 1.1.1.405, 2.7.7.40, 2.7.7.60 - I ko:K00991,ko:K21681 ko00040,ko00900,ko01100,ko01110,ko01130,map00040,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP)
GAMIOLLD_00597 1.29e-163 pcp 3.4.19.3 - O ko:K01304 - ko00000,ko01000,ko01002 Removes 5-oxoproline from various penultimate amino acid residues except L-proline
GAMIOLLD_00598 6.38e-118 - - - D - - - nuclear chromosome segregation
GAMIOLLD_00599 0.0 pepC2 3.4.22.40 - E ko:K01372 - ko00000,ko01000,ko01002 Peptidase C1-like family
GAMIOLLD_00600 1.18e-230 - - - L - - - Excalibur calcium-binding domain
GAMIOLLD_00601 2.79e-277 aroG 2.5.1.54 - E ko:K01626 ko00400,ko01100,ko01110,ko01130,ko01230,ko02024,map00400,map01100,map01110,map01130,map01230,map02024 ko00000,ko00001,ko00002,ko01000 Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
GAMIOLLD_00602 7.1e-309 - - - EGP - - - Major Facilitator Superfamily
GAMIOLLD_00603 5.96e-139 - - - K - - - helix_turn_helix, Arsenical Resistance Operon Repressor
GAMIOLLD_00604 3.6e-305 aroG 2.5.1.54 - E ko:K01626 ko00400,ko01100,ko01110,ko01130,ko01230,ko02024,map00400,map01100,map01110,map01130,map01230,map02024 ko00000,ko00001,ko00002,ko01000 Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
GAMIOLLD_00605 6.31e-160 mtnN 3.2.2.9 - E ko:K01243 ko00270,ko01100,ko01230,map00270,map01100,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
GAMIOLLD_00606 8.29e-308 phoR 2.7.13.3 - T ko:K07636,ko:K07768 ko02020,map02020 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 His Kinase A (phosphoacceptor) domain
GAMIOLLD_00607 7.72e-165 regX3 - - KT ko:K07776 ko02020,map02020 ko00000,ko00001,ko00002,ko02022 Transcriptional regulatory protein, C terminal
GAMIOLLD_00608 9.45e-260 pstS - - P ko:K02040 ko02010,ko02020,ko05152,map02010,map02020,map05152 ko00000,ko00001,ko00002,ko02000 Part of the ABC transporter complex PstSACB involved in phosphate import
GAMIOLLD_00609 8.51e-219 pstC - - P ko:K02037 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 probably responsible for the translocation of the substrate across the membrane
GAMIOLLD_00610 3.82e-233 pstA - - P ko:K02038 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Phosphate transport system permease
GAMIOLLD_00611 1.29e-189 pstB 3.6.3.27 - P ko:K02036 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
GAMIOLLD_00612 8.4e-188 - - - S - - - Protein conserved in bacteria
GAMIOLLD_00613 5.92e-313 - - - S ko:K06901 - ko00000,ko02000 Permease family
GAMIOLLD_00615 1.57e-21 - - - G - - - BNR repeat-like domain
GAMIOLLD_00616 5.94e-234 xynB2 1.1.1.169 - E ko:K00077 ko00770,ko01100,ko01110,map00770,map01100,map01110 ko00000,ko00001,ko00002,ko01000 lipolytic protein G-D-S-L family
GAMIOLLD_00617 5.06e-115 rplJ - - J ko:K02864 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
GAMIOLLD_00618 5.13e-61 rplL - - J ko:K02935 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
GAMIOLLD_00620 0.0 - - - T - - - Forkhead associated domain
GAMIOLLD_00621 0.0 - - - L - - - Superfamily I DNA and RNA helicases and helicase subunits
GAMIOLLD_00622 1.66e-55 - - - - - - - -
GAMIOLLD_00623 2.1e-141 - - - NO - - - SAF
GAMIOLLD_00624 1.88e-51 - - - S - - - Putative regulatory protein
GAMIOLLD_00625 1.4e-154 ygfA 6.3.3.2 - H ko:K01934 ko00670,ko01100,map00670,map01100 ko00000,ko00001,ko01000 5-formyltetrahydrofolate cyclo-ligase family
GAMIOLLD_00626 2.35e-119 rimJ 2.3.1.128 - J ko:K03790 - ko00000,ko01000,ko03009 Acetyltransferase (GNAT) domain
GAMIOLLD_00627 1.64e-265 - - - - - - - -
GAMIOLLD_00628 3.49e-63 groS - - O ko:K04078 - ko00000,ko03029,ko03110 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
GAMIOLLD_00629 3.21e-166 - 3.5.2.6 - V ko:K17836 ko00311,ko01130,ko01501,map00311,map01130,map01501 ko00000,ko00001,ko00002,ko01000,ko01504 Beta-lactamase enzyme family
GAMIOLLD_00630 5.61e-73 - - - KLT - - - Associated with various cellular activities
GAMIOLLD_00634 2.71e-35 rpmG - - J ko:K02913 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal protein L33
GAMIOLLD_00635 3.69e-278 murB 1.3.1.98 - M ko:K00075 ko00520,ko00550,ko01100,map00520,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Cell wall formation
GAMIOLLD_00636 3.55e-81 fdxA - - C ko:K05524 - ko00000 4Fe-4S binding domain
GAMIOLLD_00637 3.46e-286 dapC - - E - - - Aminotransferase class I and II
GAMIOLLD_00638 1.87e-307 dinB 2.7.7.7 - L ko:K02346 - ko00000,ko01000,ko03400 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
GAMIOLLD_00640 0.0 - - - M ko:K07282 - ko00000 Bacterial capsule synthesis protein PGA_cap
GAMIOLLD_00641 2.82e-147 yigZ - - S - - - Uncharacterized protein family UPF0029
GAMIOLLD_00642 5.92e-155 - - - - - - - -
GAMIOLLD_00643 0.0 malQ 2.4.1.25 GH77 G ko:K00705 ko00500,ko01100,map00500,map01100 ko00000,ko00001,ko01000 4-alpha-glucanotransferase
GAMIOLLD_00644 2.64e-103 rplM - - J ko:K02871 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
GAMIOLLD_00645 1.71e-99 rpsI - - J ko:K02996 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the universal ribosomal protein uS9 family
GAMIOLLD_00646 0.0 glgX 3.2.1.196, 3.2.1.68 CBM48,GH13 G ko:K01214,ko:K02438 ko00500,ko01100,ko01110,map00500,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Belongs to the glycosyl hydrolase 13 family
GAMIOLLD_00647 1.01e-296 - - - GK - - - transcriptional repressor of nag (N-acetylglucosamine) operon K02565
GAMIOLLD_00648 0.0 adhE 1.1.1.1, 1.2.1.10, 1.2.1.81 - C ko:K04072,ko:K15515 ko00010,ko00071,ko00350,ko00620,ko00625,ko00626,ko00650,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00620,map00625,map00626,map00650,map01100,map01110,map01120,map01130,map01220 ko00000,ko00001,ko01000 belongs to the iron- containing alcohol dehydrogenase family
GAMIOLLD_00649 1.36e-213 budA 4.1.1.5 - H ko:K01575 ko00650,ko00660,map00650,map00660 ko00000,ko00001,ko01000 Alpha-acetolactate decarboxylase
GAMIOLLD_00650 1.34e-141 - - - S - - - YwiC-like protein
GAMIOLLD_00651 1.07e-18 - - - S - - - YwiC-like protein
GAMIOLLD_00652 5.42e-67 rpsJ - - J ko:K02946 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Involved in the binding of tRNA to the ribosomes
GAMIOLLD_00653 6.65e-153 rplC - - J ko:K02906 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
GAMIOLLD_00654 1.34e-154 rplD - - J ko:K02926 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms part of the polypeptide exit tunnel
GAMIOLLD_00655 2.54e-61 rplW - - J ko:K02892 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
GAMIOLLD_00656 1.15e-196 rplB - - J ko:K02886 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
GAMIOLLD_00657 1.4e-62 rpsS - - J ko:K02965 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
GAMIOLLD_00658 2.21e-74 rplV - - J ko:K02890 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
GAMIOLLD_00659 2.73e-161 rpsC - - J ko:K02982 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
GAMIOLLD_00660 2.71e-98 rplP - - J ko:K02878 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
GAMIOLLD_00661 6.77e-51 rpmC - - J ko:K02904 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the universal ribosomal protein uL29 family
GAMIOLLD_00662 9.4e-57 rpsQ - - J ko:K02961 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
GAMIOLLD_00663 7.32e-79 rplN - - J ko:K02874 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
GAMIOLLD_00664 9.32e-70 rplX - - J ko:K02895 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
GAMIOLLD_00665 1.6e-133 rplE - - J ko:K02931 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
GAMIOLLD_00666 7.06e-40 rpsN - - J ko:K02954 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
GAMIOLLD_00667 9.65e-91 rpsH - - J ko:K02994 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
GAMIOLLD_00668 2.69e-122 rplF - - J ko:K02933 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
GAMIOLLD_00669 1.53e-76 rplR - - J ko:K02881 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
GAMIOLLD_00670 2.04e-149 rpsE - - J ko:K02988 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
GAMIOLLD_00671 1.46e-34 rpmD - - J ko:K02907 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal protein L30p/L7e
GAMIOLLD_00672 1.51e-94 rplO - - J ko:K02876 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 binds to the 23S rRNA
GAMIOLLD_00673 0.0 secY - - U ko:K03076 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
GAMIOLLD_00674 4.79e-129 adk 2.7.4.3 - F ko:K00939 ko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000,ko04147 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
GAMIOLLD_00675 6.91e-45 infA - - J ko:K02518 - ko00000,ko03012 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
GAMIOLLD_00676 1.03e-20 rpmJ - - J ko:K02919 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL36 family
GAMIOLLD_00677 6.96e-83 rpsM - - J ko:K02952 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
GAMIOLLD_00678 7.34e-86 rpsK - - J ko:K02948 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
GAMIOLLD_00679 1.4e-236 rpoA 2.7.7.6 - K ko:K03040 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
GAMIOLLD_00680 3.77e-95 rplQ - - J ko:K02879 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal protein L17
GAMIOLLD_00681 0.0 - 3.2.1.52 GH20 G ko:K12373 ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142 ko00000,ko00001,ko00002,ko01000,ko03110 hydrolase family 20, catalytic
GAMIOLLD_00682 4.08e-221 truA 5.4.99.12 - J ko:K06173 - ko00000,ko01000,ko03016 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
GAMIOLLD_00683 0.0 gcs2 - - S ko:K06048 - ko00000,ko01000 A circularly permuted ATPgrasp
GAMIOLLD_00684 2.25e-198 - - - E - - - Transglutaminase/protease-like homologues
GAMIOLLD_00686 1.05e-167 tnp3503b - - L - - - Transposase and inactivated derivatives
GAMIOLLD_00687 1.33e-226 - - - - - - - -
GAMIOLLD_00688 1.16e-241 nusA - - K ko:K02600 - ko00000,ko03009,ko03021 Participates in both transcription termination and antitermination
GAMIOLLD_00689 0.0 infB - - J ko:K02519 - ko00000,ko03012,ko03029 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
GAMIOLLD_00690 8.76e-124 rbfA - - J ko:K02834 - ko00000,ko03009 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
GAMIOLLD_00691 2.34e-301 truB 5.4.99.25 - J ko:K03177 - ko00000,ko01000,ko03016 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
GAMIOLLD_00692 1.15e-300 ribF 2.7.1.26, 2.7.7.2 - H ko:K11753 ko00740,ko01100,ko01110,map00740,map01100,map01110 ko00000,ko00001,ko00002,ko01000 riboflavin kinase
GAMIOLLD_00693 0.0 radA - - O ko:K04485 - ko00000,ko03400 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
GAMIOLLD_00694 6.9e-142 - - - - - - - -
GAMIOLLD_00695 5.18e-07 - - - S - - - Mitochondrial domain of unknown function (DUF1713)
GAMIOLLD_00696 1.28e-162 rpiA 5.3.1.6 - G ko:K01807 ko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
GAMIOLLD_00697 2.06e-259 rnhA 3.1.26.4 - L ko:K03469 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
GAMIOLLD_00698 0.0 - 3.2.1.35 - G ko:K01197 ko00531,ko01100,map00531,map01100 ko00000,ko00001,ko00002,ko00536,ko00537,ko01000,ko02042 beta-N-acetylglucosaminidase
GAMIOLLD_00699 0.0 merA 1.16.1.1 - C ko:K00520,ko:K21739 - ko00000,ko01000 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
GAMIOLLD_00700 0.0 pgm 5.4.2.2 - G ko:K01835 ko00010,ko00030,ko00052,ko00230,ko00500,ko00520,ko00521,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00052,map00230,map00500,map00520,map00521,map01100,map01110,map01120,map01130 ko00000,ko00001,ko00002,ko01000 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
GAMIOLLD_00702 4.43e-57 - - - M - - - Spy0128-like isopeptide containing domain
GAMIOLLD_00703 4.73e-05 - - - O ko:K18546 - ko00000,ko01000,ko01002 Peptidase s1 and s6 chymotrypsin hap
GAMIOLLD_00704 0.0 ptsG - - G ko:K02755,ko:K02756,ko:K02757 ko02060,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 pts system, glucose-specific IIABC component
GAMIOLLD_00705 4.66e-196 arbG - - K ko:K03488 - ko00000,ko03000 CAT RNA binding domain
GAMIOLLD_00706 7.91e-271 - - - I - - - Diacylglycerol kinase catalytic domain
GAMIOLLD_00707 0.0 - 3.1.3.5 - F ko:K01081 ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110 ko00000,ko00001,ko01000 5'-nucleotidase, C-terminal domain
GAMIOLLD_00708 2.42e-304 serS 6.1.1.11 - J ko:K01875 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
GAMIOLLD_00710 0.0 - 3.2.1.50 - G ko:K01205 ko00531,ko01100,ko04142,map00531,map01100,map04142 ko00000,ko00001,ko00002,ko01000,ko04147 Alpha-N-acetylglucosaminidase (NAGLU) tim-barrel domain
GAMIOLLD_00712 2.61e-122 - - - - - - - -
GAMIOLLD_00713 0.0 zwf 1.1.1.363, 1.1.1.49 - G ko:K00036 ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,ko05230,map00030,map00480,map01100,map01110,map01120,map01130,map01200,map05230 ko00000,ko00001,ko00002,ko01000,ko04147 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
GAMIOLLD_00714 9.84e-236 opcA - - G - - - Glucose-6-phosphate dehydrogenase subunit
GAMIOLLD_00715 6.81e-180 pgl 3.1.1.31 - G ko:K01057 ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
GAMIOLLD_00716 0.0 gnd 1.1.1.343, 1.1.1.44 - H ko:K00033 ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
GAMIOLLD_00717 1.91e-163 tcsR3 - - K - - - helix_turn_helix, Lux Regulon
GAMIOLLD_00718 0.0 tcsS3 - - KT - - - PspC domain
GAMIOLLD_00719 0.0 pspC - - KT - - - PspC domain
GAMIOLLD_00720 4.08e-199 - - - - - - - -
GAMIOLLD_00721 3.2e-144 - - - S - - - Protein of unknown function (DUF4125)
GAMIOLLD_00722 0.0 - - - S - - - Domain of unknown function (DUF4037)
GAMIOLLD_00723 7.45e-278 - - - EGP ko:K08156,ko:K19577 - ko00000,ko02000 Major Facilitator Superfamily
GAMIOLLD_00725 0.0 lysS 6.1.1.6 - J ko:K04567 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the class-II aminoacyl-tRNA synthetase family
GAMIOLLD_00726 1.37e-222 menA 2.5.1.74 - H ko:K02548 ko00130,ko01100,ko01110,map00130,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko01006 Belongs to the MenA family. Type 1 subfamily
GAMIOLLD_00727 9.96e-189 gpmA 5.4.2.11 - G ko:K01834 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
GAMIOLLD_00729 9.33e-153 phoU - - P ko:K02039 - ko00000 Plays a role in the regulation of phosphate uptake
GAMIOLLD_00730 1.86e-287 senX3 2.7.13.3 - T ko:K07768 ko02020,map02020 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 ATPase histidine kinase DNA gyrase B HSP90 domain protein
GAMIOLLD_00731 4.6e-53 - - - - - - - -
GAMIOLLD_00732 1.28e-275 serC 2.6.1.52 - E ko:K00831 ko00260,ko00680,ko00750,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map00750,map01100,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
GAMIOLLD_00733 1.43e-229 - - - S - - - CHAP domain
GAMIOLLD_00734 1.61e-151 - - - M ko:K21471 - ko00000,ko01000,ko01002,ko01011 NlpC/P60 family
GAMIOLLD_00735 1.31e-244 - - - T - - - Universal stress protein family
GAMIOLLD_00736 4.35e-94 - - - O - - - OsmC-like protein
GAMIOLLD_00737 4.99e-223 thyA 2.1.1.45 - F ko:K00560 ko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523 ko00000,ko00001,ko00002,ko01000 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
GAMIOLLD_00738 5.46e-165 folA 1.5.1.3 - H ko:K00287 ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523 ko00000,ko00001,ko00002,ko01000 dihydrofolate reductase
GAMIOLLD_00739 6.7e-124 ptpA 3.1.3.48 - T ko:K01104 - ko00000,ko01000 low molecular weight
GAMIOLLD_00740 4.43e-250 - - - S - - - Oxidoreductase family, NAD-binding Rossmann fold
GAMIOLLD_00741 6.63e-52 - - - E - - - Branched-chain amino acid transport protein (AzlD)
GAMIOLLD_00742 5.06e-145 vex - - V ko:K02003 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
GAMIOLLD_00743 1.94e-270 - - - V ko:K02004 - ko00000,ko00002,ko02000 Efflux ABC transporter, permease protein
GAMIOLLD_00744 4.37e-289 - - - V ko:K02004 - ko00000,ko00002,ko02000 ABC transporter permease
GAMIOLLD_00745 2e-09 - - - S - - - Psort location CytoplasmicMembrane, score 9.99
GAMIOLLD_00746 4.81e-236 - - - - - - - -
GAMIOLLD_00747 6.72e-140 - - - V ko:K02003 - ko00000,ko00002,ko02000 ABC transporter
GAMIOLLD_00748 7.07e-231 - - - V - - - N-Acetylmuramoyl-L-alanine amidase
GAMIOLLD_00749 1.64e-138 - - - - - - - -
GAMIOLLD_00750 5.05e-153 - - - K - - - Transcriptional regulatory protein, C terminal
GAMIOLLD_00751 2.72e-299 - - - T - - - HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
GAMIOLLD_00752 4.13e-230 - - - K ko:K02529 - ko00000,ko03000 Transcriptional regulator, LacI family
GAMIOLLD_00753 8.2e-118 nagA 3.5.1.25 - G ko:K01443 ko00520,ko01130,map00520,map01130 ko00000,ko00001,ko01000 Amidohydrolase family
GAMIOLLD_00754 0.0 lacZ6 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score 8.87
GAMIOLLD_00755 0.0 gph - - G ko:K16209 - ko00000,ko02000 Psort location CytoplasmicMembrane, score 10.00
GAMIOLLD_00757 4.12e-224 trmB 2.1.1.33 - J ko:K03439 - ko00000,ko01000,ko03016 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
GAMIOLLD_00758 5.63e-255 galE 5.1.3.2 - M ko:K01784 ko00052,ko00520,ko01100,map00052,map00520,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the NAD(P)-dependent epimerase dehydratase family
GAMIOLLD_00759 2.03e-110 - - - S - - - Domain of unknown function (DUF4190)
GAMIOLLD_00762 1.48e-271 fucO 1.1.1.77, 1.1.99.37, 1.2.98.1 - C ko:K00048,ko:K17067 ko00625,ko00630,ko00640,ko00680,ko01120,ko01200,map00625,map00630,map00640,map00680,map01120,map01200 ko00000,ko00001,ko01000 Iron-containing alcohol dehydrogenase
GAMIOLLD_00763 5.42e-227 - - - M - - - Glycosyltransferase like family 2
GAMIOLLD_00764 0.0 - - - S - - - AI-2E family transporter
GAMIOLLD_00765 3.97e-295 - - - M - - - Glycosyl transferase family 21
GAMIOLLD_00766 2.26e-215 natA - - V ko:K01990 - ko00000,ko00002,ko02000 ATPases associated with a variety of cellular activities
GAMIOLLD_00767 0.0 - - - - ko:K01992 - ko00000,ko00002,ko02000 -
GAMIOLLD_00768 0.0 dacB 3.4.16.4 - M ko:K07259 ko00550,map00550 ko00000,ko00001,ko01000,ko01002,ko01011 D-Ala-D-Ala carboxypeptidase 3 (S13) family
GAMIOLLD_00769 4.95e-269 tilS 2.4.2.8, 6.3.4.19 - J ko:K00760,ko:K04075 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 ko00000,ko00001,ko01000,ko03016 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
GAMIOLLD_00770 2.65e-127 hpt 2.4.2.8 - F ko:K00760 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 ko00000,ko00001,ko01000 Belongs to the purine pyrimidine phosphoribosyltransferase family
GAMIOLLD_00771 0.0 ftsH - - O ko:K03798 - ko00000,ko00002,ko01000,ko01002,ko03110 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
GAMIOLLD_00772 2.05e-130 folE 3.5.4.16 - H ko:K01495 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko00002,ko01000 GTP cyclohydrolase
GAMIOLLD_00773 3.21e-210 folP 2.5.1.15 - H ko:K00796 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
GAMIOLLD_00774 0.0 folK 2.7.6.3, 4.1.2.25 - H ko:K00950,ko:K13940 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
GAMIOLLD_00775 2.35e-107 - - - S - - - Protein of unknown function (DUF3180)
GAMIOLLD_00776 1.08e-218 tesB - - I ko:K10805 ko01040,map01040 ko00000,ko00001,ko01000,ko01004 Thioesterase-like superfamily
GAMIOLLD_00777 0.0 - 3.2.1.52 GH20 G ko:K12373 ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142 ko00000,ko00001,ko00002,ko01000,ko03110 hydrolase family 20, catalytic
GAMIOLLD_00778 0.0 yjjK - - S - - - ATP-binding cassette protein, ChvD family
GAMIOLLD_00780 2.59e-73 - - - M - - - domain, Protein
GAMIOLLD_00781 1.76e-161 - - - - - - - -
GAMIOLLD_00783 4.32e-148 pcp 3.4.19.3 - O ko:K01304 - ko00000,ko01000,ko01002 Removes 5-oxoproline from various penultimate amino acid residues except L-proline
GAMIOLLD_00784 4.95e-21 - - - S - - - Protein of unknown function (DUF979)
GAMIOLLD_00785 3.61e-65 - - - S - - - DUF218 domain
GAMIOLLD_00787 2.24e-146 - - - S ko:K07005 - ko00000 Pyridoxamine 5'-phosphate oxidase
GAMIOLLD_00788 2.95e-201 - - - I - - - alpha/beta hydrolase fold
GAMIOLLD_00789 6.7e-74 - - - EGP ko:K18926 - ko00000,ko00002,ko02000 Major facilitator Superfamily
GAMIOLLD_00790 0.0 - - - S - - - ATPases associated with a variety of cellular activities
GAMIOLLD_00791 3.68e-229 glkA 2.7.1.2 - G ko:K00845 ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 ROK family
GAMIOLLD_00792 3.85e-17 - - - EGP - - - Major facilitator superfamily
GAMIOLLD_00793 1.01e-65 - - - EGP - - - Major facilitator superfamily
GAMIOLLD_00794 2.17e-45 - - - C - - - Aldo/keto reductase family
GAMIOLLD_00795 0.0 - 2.5.1.49 - H ko:K01740 ko00270,ko01100,map00270,map01100 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score 9.98
GAMIOLLD_00796 1.05e-271 - - - S - - - Psort location Cytoplasmic, score 8.87
GAMIOLLD_00797 7.7e-34 - - - L - - - Transposase
GAMIOLLD_00799 2.03e-191 - - - S ko:K07090 - ko00000 Sulfite exporter TauE/SafE
GAMIOLLD_00800 1.87e-182 - - - V ko:K02004 - ko00000,ko00002,ko02000 FtsX-like permease family
GAMIOLLD_00802 1.23e-210 - - - EG - - - EamA-like transporter family
GAMIOLLD_00803 0.0 - - - JKL - - - helicase superfamily c-terminal domain
GAMIOLLD_00804 7.95e-189 - 3.5.2.6 - V ko:K17836 ko00311,ko01130,ko01501,map00311,map01130,map01501 ko00000,ko00001,ko00002,ko01000,ko01504 Beta-lactamase enzyme family
GAMIOLLD_00805 1.54e-216 - 5.1.3.15 - G ko:K01792 ko00010,ko01100,ko01110,ko01120,ko01130,map00010,map01100,map01110,map01120,map01130 ko00000,ko00001,ko01000 Aldose 1-epimerase
GAMIOLLD_00806 4.16e-143 - - - - - - - -
GAMIOLLD_00807 0.0 cfa 2.1.1.79 - M ko:K00574 - ko00000,ko01000 Mycolic acid cyclopropane synthetase
GAMIOLLD_00808 2e-241 iolG 1.1.1.18, 1.1.1.369 - S ko:K00010 ko00521,ko00562,ko01100,ko01120,ko01130,map00521,map00562,map01100,map01120,map01130 ko00000,ko00001,ko01000 Oxidoreductase family, C-terminal alpha/beta domain
GAMIOLLD_00809 2.74e-209 - - - G ko:K05340 - ko00000,ko02000 Sugar transport protein
GAMIOLLD_00810 1.38e-251 - - - K ko:K13633 - ko00000,ko03000 helix_turn_helix, arabinose operon control protein
GAMIOLLD_00812 1.85e-48 rpmE - - J ko:K02909 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds the 23S rRNA
GAMIOLLD_00813 1.17e-246 prfA - - J ko:K02835 - ko00000,ko03012 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
GAMIOLLD_00814 1.34e-233 prmC 2.1.1.297 - J ko:K02493 - ko00000,ko01000,ko03012 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
GAMIOLLD_00815 8.03e-71 - 2.3.1.79 - S ko:K00661 - ko00000,ko01000 Bacterial transferase hexapeptide repeat protein
GAMIOLLD_00816 2.13e-150 ywlC 2.7.7.87 - J ko:K07566 - ko00000,ko01000,ko03009,ko03016 Belongs to the SUA5 family
GAMIOLLD_00817 8.7e-260 rfe 2.7.8.33, 2.7.8.35 - M ko:K02851 - ko00000,ko01000,ko01003,ko01005 Glycosyl transferase family 4
GAMIOLLD_00818 0.0 guaB 1.1.1.205 - F ko:K00088 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko04147 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth
GAMIOLLD_00819 0.0 - 3.2.1.20 GH31 G ko:K01187 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 Alpha-amylase domain
GAMIOLLD_00820 2.81e-164 - - - KT ko:K02483 - ko00000,ko02022 Transcriptional regulatory protein, C terminal
GAMIOLLD_00821 1.91e-156 orn - - L ko:K13288 ko03008,map03008 ko00000,ko00001,ko01000,ko03009,ko03019 3'-to-5' exoribonuclease specific for small oligoribonucleotides
GAMIOLLD_00822 2.84e-205 - - - S - - - Sucrose-6F-phosphate phosphohydrolase
GAMIOLLD_00823 0.0 - - - L - - - PIF1-like helicase
GAMIOLLD_00825 0.0 proS 6.1.1.15 - J ko:K01881 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
GAMIOLLD_00826 5.42e-219 - - - - - - - -
GAMIOLLD_00827 2.31e-155 ssb2 - - L ko:K03111 ko03030,ko03430,ko03440,map03030,map03430,map03440 ko00000,ko00001,ko03029,ko03032,ko03400 Single-strand binding protein family
GAMIOLLD_00828 0.0 pepO 3.4.24.11, 3.4.24.71 - O ko:K01389,ko:K01415,ko:K07386 ko04614,ko04640,ko04974,ko05010,map04614,map04640,map04974,map05010 ko00000,ko00001,ko01000,ko01002,ko04090,ko04147 Peptidase family M13
GAMIOLLD_00829 2.65e-194 - - - S - - - Short repeat of unknown function (DUF308)
GAMIOLLD_00830 3.57e-191 map 3.4.11.18 - E ko:K01265 - ko00000,ko01000,ko01002 Methionine aminopeptidase
GAMIOLLD_00831 0.0 gltA 2.3.3.1 - C ko:K01647 ko00020,ko00630,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map01100,map01110,map01120,map01130,map01200,map01210,map01230 br01601,ko00000,ko00001,ko00002,ko01000 Citrate synthase, C-terminal domain
GAMIOLLD_00832 2.92e-131 - 2.7.7.7 - L ko:K02342 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 Exonuclease, DNA polymerase III, epsilon subunit family
GAMIOLLD_00833 1.04e-249 - - - C ko:K19265 - ko00000,ko01000 Aldo/keto reductase family
GAMIOLLD_00834 2.16e-103 - - - EGP - - - Major Facilitator Superfamily
GAMIOLLD_00835 2.11e-119 - - - K - - - acetyltransferase
GAMIOLLD_00836 0.0 - - - P ko:K12952 - ko00000,ko01000 E1-E2 ATPase
GAMIOLLD_00837 0.0 - - - V ko:K02003,ko:K02004 - ko00000,ko00002,ko02000 ATPases associated with a variety of cellular activities
GAMIOLLD_00838 1.66e-286 glxK 2.7.1.165 - G ko:K00865 ko00260,ko00561,ko00630,ko01100,ko01120,ko01130,map00260,map00561,map00630,map01100,map01120,map01130 ko00000,ko00001,ko01000 Belongs to the glycerate kinase type-1 family
GAMIOLLD_00839 0.0 nox - - C - - - Pyridine nucleotide-disulphide oxidoreductase
GAMIOLLD_00840 4.84e-297 metC1 4.4.1.8 - E ko:K01760 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Cys/Met metabolism PLP-dependent enzyme
GAMIOLLD_00841 1.49e-309 - 2.5.1.49 - E ko:K01740 ko00270,ko01100,map00270,map01100 ko00000,ko00001,ko01000 Cys/Met metabolism PLP-dependent enzyme
GAMIOLLD_00842 1.45e-177 hflK - - O - - - prohibitin homologues
GAMIOLLD_00843 0.0 aldH 1.2.1.3, 1.2.99.10 - C ko:K00128,ko:K22445 ko00010,ko00053,ko00071,ko00280,ko00310,ko00330,ko00340,ko00380,ko00410,ko00561,ko00620,ko00625,ko00903,ko00981,ko01100,ko01110,ko01120,ko01130,map00010,map00053,map00071,map00280,map00310,map00330,map00340,map00380,map00410,map00561,map00620,map00625,map00903,map00981,map01100,map01110,map01120,map01130 ko00000,ko00001,ko00002,ko01000 Aldehyde dehydrogenase family
GAMIOLLD_00844 2.38e-73 - - - S ko:K08972 - ko00000 Mycobacterial 4 TMS phage holin, superfamily IV
GAMIOLLD_00845 0.0 ileS 6.1.1.5 - J ko:K01870 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
GAMIOLLD_00846 0.0 cas3 - - L ko:K07012 - ko00000,ko01000,ko02048 DEAD-like helicases superfamily
GAMIOLLD_00847 6.69e-133 cas5d - - S ko:K19119 - ko00000,ko02048 CRISPR-associated protein (Cas_Cas5)
GAMIOLLD_00848 1.19e-305 - - - S - - - CRISPR-associated protein (Cas_Csd1)
GAMIOLLD_00849 1.9e-189 - - - L ko:K19118 - ko00000,ko02048 CRISPR-associated protein Cas7
GAMIOLLD_00850 2.95e-142 cas4 3.1.12.1 - L ko:K07464,ko:K15342 - ko00000,ko01000,ko02048,ko03400 Domain of unknown function DUF83
GAMIOLLD_00851 1.36e-224 cas1 - - L ko:K15342 - ko00000,ko02048,ko03400 CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
GAMIOLLD_00852 1.88e-55 cas2 - - L ko:K09951 - ko00000,ko02048 CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
GAMIOLLD_00854 0.0 - 3.2.1.51 GH29 G ko:K01206 ko00511,map00511 ko00000,ko00001,ko01000,ko04147 Alpha-L-fucosidase
GAMIOLLD_00855 7.12e-25 - - - EH - - - D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
GAMIOLLD_00856 5.12e-242 - - - K - - - Periplasmic binding protein domain
GAMIOLLD_00857 1.26e-161 - - - G ko:K02026 - ko00000,ko00002,ko02000 ABC transporter permease
GAMIOLLD_00858 0.0 bga1 3.2.1.23 - G ko:K12308 ko00052,map00052 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score 8.87
GAMIOLLD_00859 5.68e-83 - - - G ko:K02027 - ko00000,ko00002,ko02000 carbohydrate transport
GAMIOLLD_00860 0.0 - - - G ko:K02027 - ko00000,ko00002,ko02000 Bacterial extracellular solute-binding protein
GAMIOLLD_00861 2.65e-184 coaX 2.7.1.33 - H ko:K03525 ko00770,ko01100,map00770,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
GAMIOLLD_00862 0.0 - - - E ko:K02035 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter, substrate-binding protein, family 5
GAMIOLLD_00863 8.15e-217 - - - P ko:K02033 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
GAMIOLLD_00864 1.01e-207 - - - EP ko:K02034 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
GAMIOLLD_00865 1.96e-183 - - - EP ko:K02031 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 oligopeptide transport protein of the ABC superfamily, ATP-binding component
GAMIOLLD_00866 3.69e-198 - - - E ko:K02032 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 ATPases associated with a variety of cellular activities
GAMIOLLD_00867 5.32e-242 pdxB - - EH - - - Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
GAMIOLLD_00868 0.0 - 3.6.4.12 - K ko:K03655 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Putative DNA-binding domain
GAMIOLLD_00869 4.53e-211 tnp3521a2 - - L - - - Integrase core domain
GAMIOLLD_00870 5.58e-33 - - - S - - - Adenine-specific methyltransferase EcoRI
GAMIOLLD_00871 9.3e-53 - - - - - - - -
GAMIOLLD_00872 1.71e-144 pncA 3.5.1.19 - Q ko:K08281 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko01000 Isochorismatase family
GAMIOLLD_00874 8.63e-56 glmS 2.6.1.16 - M ko:K00820 ko00250,ko00520,ko01100,ko01130,ko04931,map00250,map00520,map01100,map01130,map04931 ko00000,ko00001,ko01000,ko01002 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
GAMIOLLD_00876 7.11e-309 pbuX - - F ko:K03458 - ko00000 Permease family
GAMIOLLD_00877 6.52e-139 xpt 2.4.2.22 - F ko:K03816 ko00230,ko01100,ko01110,map00230,map01100,map01110 ko00000,ko00001,ko01000 Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
GAMIOLLD_00878 0.0 yrhL - - I - - - Psort location CytoplasmicMembrane, score 9.99
GAMIOLLD_00879 0.0 pcrA 3.6.4.12 - L ko:K03657 ko03420,ko03430,map03420,map03430 ko00000,ko00001,ko01000,ko03400 DNA helicase
GAMIOLLD_00880 2.46e-84 - - - S - - - Domain of unknown function (DUF4418)
GAMIOLLD_00881 1.87e-271 - - - V ko:K02004 - ko00000,ko00002,ko02000 FtsX-like permease family
GAMIOLLD_00882 6.67e-173 - - - V ko:K02003 - ko00000,ko00002,ko02000 ABC transporter
GAMIOLLD_00883 1.83e-141 rpsD - - J ko:K02986 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
GAMIOLLD_00884 0.0 - - - I - - - Psort location CytoplasmicMembrane, score 9.99
GAMIOLLD_00885 4.37e-173 - 5.4.2.12 - G ko:K15634 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Phosphoglycerate mutase family
GAMIOLLD_00886 4.03e-85 - - - S - - - Bacterial protein of unknown function (DUF948)
GAMIOLLD_00887 7.33e-50 - - - - - - - -
GAMIOLLD_00888 0.0 alaS 6.1.1.7 - J ko:K01872 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
GAMIOLLD_00889 6.58e-99 ruvX - - L ko:K07447 - ko00000,ko01000 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
GAMIOLLD_00890 2e-250 mltG - - S ko:K07082 - ko00000 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
GAMIOLLD_00891 5.3e-69 - 3.4.23.43 - S ko:K02654 - ko00000,ko00002,ko01000,ko01002,ko02035,ko02044 Type IV leader peptidase family
GAMIOLLD_00892 4.5e-280 aroC 4.2.3.5 - E ko:K01736 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
GAMIOLLD_00893 0.0 aroB 2.7.1.71, 4.2.3.4 - H ko:K01735,ko:K13829 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
GAMIOLLD_00894 1.87e-102 aroQ 4.2.1.10 - E ko:K03786 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes a trans-dehydration via an enolate intermediate
GAMIOLLD_00895 2.14e-21 - - - - - - - -
GAMIOLLD_00896 3.46e-154 - - - K - - - helix_turn_helix, Lux Regulon
GAMIOLLD_00897 1.76e-05 srtA 3.4.22.70 - M ko:K07284 - ko00000,ko01000,ko01002,ko01011 Sortase (surface protein transpeptidase)
GAMIOLLD_00898 0.0 pyrG 6.3.4.2 - F ko:K01937 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
GAMIOLLD_00899 0.0 sufB - - O ko:K09014 - ko00000 FeS assembly protein SufB
GAMIOLLD_00900 8.37e-298 sufD - - O ko:K09015 - ko00000 FeS assembly protein SufD
GAMIOLLD_00901 2.13e-185 sufC - - O ko:K09013 - ko00000,ko02000 FeS assembly ATPase SufC
GAMIOLLD_00902 1.04e-305 sufS 2.8.1.7, 4.4.1.16 - E ko:K11717 ko00450,ko01100,map00450,map01100 ko00000,ko00001,ko01000 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
GAMIOLLD_00903 4.14e-132 iscU - - C ko:K04488 - ko00000 SUF system FeS assembly protein, NifU family
GAMIOLLD_00904 2.56e-141 - - - S - - - Iron-sulfur cluster assembly protein
GAMIOLLD_00905 1.42e-308 glgC 2.7.7.27 - H ko:K00975 ko00500,ko00520,ko01100,ko01110,ko02026,map00500,map00520,map01100,map01110,map02026 ko00000,ko00001,ko00002,ko01000 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
GAMIOLLD_00906 1.78e-208 spoU2 - - J - - - SpoU rRNA Methylase family
GAMIOLLD_00908 7.28e-174 - 2.1.1.193 - J ko:K09761 - ko00000,ko01000,ko03009 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
GAMIOLLD_00909 1.37e-76 hit - - FG ko:K02503 - ko00000,ko04147 Scavenger mRNA decapping enzyme C-term binding
GAMIOLLD_00910 1.05e-253 phoH - - T ko:K06217 - ko00000 PhoH-like protein
GAMIOLLD_00911 1.82e-130 ybeY - - S ko:K07042 - ko00000,ko03009 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
GAMIOLLD_00912 0.0 corC - - S - - - CBS domain
GAMIOLLD_00913 1.45e-236 era - - S ko:K03595 - ko00000,ko03009,ko03029 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
GAMIOLLD_00914 0.0 fadD2 6.2.1.3 - I ko:K01897 ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920 ko00000,ko00001,ko00002,ko01000,ko01004,ko04147 AMP-binding enzyme
GAMIOLLD_00915 6.9e-259 pntA 1.6.1.2 - C ko:K00324 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko01000 NAD(P) transhydrogenase subunit alpha part 1 K00324
GAMIOLLD_00916 1.08e-58 pntAB 1.6.1.2 - C ko:K00324 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko01000 4TM region of pyridine nucleotide transhydrogenase, mitoch
GAMIOLLD_00917 1.72e-306 pntB 1.6.1.2 - C ko:K00325 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko01000 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
GAMIOLLD_00918 2.09e-242 - - - S ko:K06889 - ko00000 alpha beta
GAMIOLLD_00919 1.66e-128 ctc - - J ko:K02897 ko03010,map03010 ko00000,ko00001,ko00002,ko03011 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
GAMIOLLD_00920 1.11e-287 ilvE 2.6.1.42 - E ko:K00826 ko00270,ko00280,ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00270,map00280,map00290,map00770,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Amino-transferase class IV
GAMIOLLD_00921 3.77e-61 - - - S - - - phosphoesterase or phosphohydrolase
GAMIOLLD_00922 3.85e-151 - - - T - - - RNA ligase
GAMIOLLD_00923 1.61e-175 - - - S - - - UPF0126 domain
GAMIOLLD_00924 3.91e-46 rpsT - - J ko:K02968 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds directly to 16S ribosomal RNA
GAMIOLLD_00925 0.0 lepA - - M ko:K03596 ko05134,map05134 ko00000,ko00001 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
GAMIOLLD_00926 2.71e-311 hemN - - H - - - Involved in the biosynthesis of porphyrin-containing compound
GAMIOLLD_00927 4.95e-18 - - - S ko:K07149 - ko00000 Membrane
GAMIOLLD_00928 0.0 aspC 2.6.1.1, 2.6.1.2, 2.6.1.66 - E ko:K00812,ko:K08969,ko:K10907,ko:K14260 ko00220,ko00250,ko00270,ko00290,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00290,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Aminotransferase, class I II
GAMIOLLD_00929 0.0 tetM - - J ko:K18220 - br01600,ko00000,ko01504 Elongation factor G, domain IV
GAMIOLLD_00930 0.0 gltB 1.4.1.13, 1.4.1.14, 1.4.7.1 - E ko:K00265,ko:K00284 ko00250,ko00630,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00250,map00630,map00910,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko01000 glutamate synthase NADPH large subunit
GAMIOLLD_00931 0.0 gltD 1.4.1.13, 1.4.1.14 - C ko:K00266 ko00250,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00250,map00910,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko01000 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
GAMIOLLD_00932 5.23e-107 - - - - - - - -
GAMIOLLD_00933 1.67e-312 glgA 2.4.1.342 GT4 G ko:K16148 ko00500,ko01100,map00500,map01100 ko00000,ko00001,ko01000,ko01003 Starch synthase catalytic domain
GAMIOLLD_00934 1.63e-231 ylmA 3.6.3.34 - P ko:K02013 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ATPases associated with a variety of cellular activities
GAMIOLLD_00935 1.08e-200 - - - S ko:K11206 - ko00000,ko01000 Carbon-nitrogen hydrolase
GAMIOLLD_00936 1.54e-63 - - - S ko:K07126 - ko00000 Sel1-like repeats.
GAMIOLLD_00937 2.51e-236 cbh 3.5.1.24 - M ko:K01442 ko00120,ko00121,ko01100,map00120,map00121,map01100 ko00000,ko00001,ko01000 Linear amide C-N hydrolase, choloylglycine hydrolase family protein
GAMIOLLD_00938 4.34e-46 - - - L - - - Helix-turn-helix domain
GAMIOLLD_00939 3.38e-176 - - - L ko:K07485 - ko00000 Transposase
GAMIOLLD_00940 1.35e-38 - - - - ko:K07485 - ko00000 -
GAMIOLLD_00941 3.82e-39 - - - - - - - -
GAMIOLLD_00942 8.33e-30 - - - - - - - -
GAMIOLLD_00943 0.0 - - - KL - - - Type III restriction enzyme res subunit
GAMIOLLD_00944 1.79e-48 - - - L - - - Eco57I restriction-modification methylase
GAMIOLLD_00945 6.66e-70 - - - L - - - Eco57I restriction-modification methylase
GAMIOLLD_00946 6.12e-233 - - - V - - - Type III restriction enzyme res subunit
GAMIOLLD_00947 1.99e-68 - - - S - - - SIR2-like domain
GAMIOLLD_00948 1.91e-287 - - - S ko:K06915 - ko00000 AAA-like domain
GAMIOLLD_00949 0.0 - - - S - - - Protein of unknown function DUF262
GAMIOLLD_00950 5.4e-39 - - - - - - - -
GAMIOLLD_00951 8.53e-32 - - - E - - - Rard protein
GAMIOLLD_00952 9.32e-176 - - - L - - - IstB-like ATP binding protein
GAMIOLLD_00953 2.26e-314 - - - L - - - Transposase
GAMIOLLD_00954 1.06e-83 - - - E - - - Rard protein
GAMIOLLD_00955 3.98e-228 - - - I - - - alpha/beta hydrolase fold
GAMIOLLD_00956 5.74e-265 trmI 2.1.1.219, 2.1.1.220 - J ko:K07442 - ko00000,ko01000,ko03016 Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
GAMIOLLD_00957 8.29e-129 sixA - - T ko:K08296 - ko00000,ko01000 Phosphoglycerate mutase family
GAMIOLLD_00958 0.0 metE 2.1.1.14 - E ko:K00549 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
GAMIOLLD_00959 8.19e-209 metF 1.5.1.20 - E ko:K00297 ko00670,ko00720,ko01100,ko01120,ko01200,ko01523,map00670,map00720,map01100,map01120,map01200,map01523 ko00000,ko00001,ko00002,ko01000 Methylenetetrahydrofolate reductase
GAMIOLLD_00961 0.0 glnE 2.7.7.42, 2.7.7.89 - H ko:K00982 - ko00000,ko01000 Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell
GAMIOLLD_00962 7.76e-234 pyrB 2.1.3.2 - F ko:K00609 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the ATCase OTCase family
GAMIOLLD_00963 1.83e-96 pyrI - - F ko:K00610 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002 Aspartate carbamoyltransferase regulatory chain, allosteric domain protein
GAMIOLLD_00964 0.0 pyrC 3.5.2.3 - F ko:K01465 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
GAMIOLLD_00965 2.31e-230 pyrF 4.1.1.23 - F ko:K01591 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the OMP decarboxylase family. Type 2 subfamily
GAMIOLLD_00966 2.94e-199 pyrK - - C ko:K02823 ko00240,ko01100,map00240,map01100 ko00000,ko00001 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B
GAMIOLLD_00967 1.18e-228 pyrD 1.3.1.14 - F ko:K17828 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
GAMIOLLD_00968 2.04e-159 pyrE 2.4.2.10 - F ko:K00762 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
GAMIOLLD_00969 2.41e-23 - - - K - - - MerR family regulatory protein
GAMIOLLD_00970 1.88e-249 adh 1.1.1.1 - C ko:K00001 ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220 ko00000,ko00001,ko01000 Zinc-binding dehydrogenase
GAMIOLLD_00971 6.07e-203 - - - - - - - -
GAMIOLLD_00972 1.4e-22 - - - K - - - Psort location Cytoplasmic, score
GAMIOLLD_00973 1.76e-19 - - - KLT - - - Protein tyrosine kinase
GAMIOLLD_00974 0.0 uvrA3 - - L ko:K03701 ko03420,map03420 ko00000,ko00001,ko03400 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
GAMIOLLD_00975 8.03e-311 - - - V - - - MatE
GAMIOLLD_00976 4.85e-169 - - - S - - - Enoyl-(Acyl carrier protein) reductase
GAMIOLLD_00977 1.02e-171 - - - L ko:K07457 - ko00000 endonuclease III
GAMIOLLD_00978 8.76e-121 - - - K - - - Transcriptional regulator PadR-like family
GAMIOLLD_00979 1.13e-226 - - - S ko:K07088 - ko00000 Membrane transport protein
GAMIOLLD_00980 5.34e-90 - 4.1.1.44 - S ko:K01607 ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220 ko00000,ko00001,ko01000 Cupin domain
GAMIOLLD_00981 8.45e-286 - 2.7.11.1 - S ko:K07154 - ko00000,ko01000,ko01001,ko02048 HipA N-terminal domain
GAMIOLLD_00982 9.61e-54 - - - K - - - Helix-turn-helix
GAMIOLLD_00983 1.02e-64 tam 2.1.1.144, 2.1.1.197 - FG ko:K00598,ko:K02169 ko00780,ko01100,map00780,map01100 ko00000,ko00001,ko00002,ko01000 trans-aconitate 2-methyltransferase activity
GAMIOLLD_00984 3.56e-24 - - - - - - - -
GAMIOLLD_00985 1.94e-130 - - - K - - - Bacterial regulatory proteins, tetR family
GAMIOLLD_00986 5.57e-120 - - - T - - - Domain of unknown function (DUF4234)
GAMIOLLD_00987 3.52e-221 - - - K - - - Bacterial regulatory helix-turn-helix protein, lysR family
GAMIOLLD_00988 6.72e-158 - 3.8.1.2 - S ko:K01560 ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120 ko00000,ko00001,ko01000 Haloacid dehalogenase-like hydrolase
GAMIOLLD_00989 0.0 nnrD 4.2.1.136, 5.1.99.6 - H ko:K17758,ko:K17759 - ko00000,ko01000 Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
GAMIOLLD_00990 7.48e-186 - 4.1.1.44 - S ko:K01607 ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220 ko00000,ko00001,ko01000 Carboxymuconolactone decarboxylase family
GAMIOLLD_00991 3.58e-115 dkg - - S - - - Oxidoreductase, aldo keto reductase family protein
GAMIOLLD_00993 0.0 ugp 2.7.7.9 - G ko:K00963 ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130 ko00000,ko00001,ko00002,ko01000 UTP-glucose-1-phosphate uridylyltransferase
GAMIOLLD_00994 0.0 - - - K - - - WYL domain
GAMIOLLD_00995 2.14e-69 - - - - - - - -
GAMIOLLD_00996 0.0 helY - - L ko:K03727 - ko00000,ko01000 DEAD DEAH box helicase
GAMIOLLD_00997 1.11e-81 rbpA - - K - - - Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters
GAMIOLLD_00998 4.88e-182 nt5e 3.1.3.18 - S ko:K01091 ko00630,ko01100,ko01110,ko01130,map00630,map01100,map01110,map01130 ko00000,ko00001,ko01000 HAD-hyrolase-like
GAMIOLLD_01000 3.01e-117 - - - K - - - Putative zinc ribbon domain
GAMIOLLD_01001 4.36e-162 - - - S - - - GyrI-like small molecule binding domain
GAMIOLLD_01002 1.48e-31 - - - L - - - DNA integration
GAMIOLLD_01004 8.13e-82 - - - - - - - -
GAMIOLLD_01005 6.86e-154 merR2 - - K - - - helix_turn_helix, mercury resistance
GAMIOLLD_01006 2.88e-96 garA - - T - - - Inner membrane component of T3SS, cytoplasmic domain
GAMIOLLD_01007 7.92e-182 - - - S - - - Bacterial protein of unknown function (DUF881)
GAMIOLLD_01008 2.78e-57 sbp - - S - - - Protein of unknown function (DUF1290)
GAMIOLLD_01009 5.59e-223 - - - S - - - Bacterial protein of unknown function (DUF881)
GAMIOLLD_01010 2.22e-151 pgsA2 2.7.8.41, 2.7.8.5 - I ko:K00995,ko:K08744 ko00564,ko01100,map00564,map01100 ko00000,ko00001,ko01000 Belongs to the CDP-alcohol phosphatidyltransferase class-I family
GAMIOLLD_01011 1.07e-200 hisG 2.4.2.17 - F ko:K00765,ko:K02502 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 ATP phosphoribosyltransferase
GAMIOLLD_01012 1.2e-54 hisE 3.6.1.31 - E ko:K01523 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Phosphoribosyl-ATP pyrophosphohydrolase
GAMIOLLD_01013 8.92e-144 rpe 5.1.3.1 - G ko:K01783 ko00030,ko00040,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Ribulose-phosphate 3-epimerase
GAMIOLLD_01014 1.12e-246 lgt - - M - - - Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
GAMIOLLD_01015 1.25e-207 trpA 4.2.1.20 - E ko:K01695 ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
GAMIOLLD_01016 0.0 trpB 4.2.1.20 - E ko:K01696 ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
GAMIOLLD_01017 0.0 der - - F ko:K03977 - ko00000,ko03009 GTPase that plays an essential role in the late steps of ribosome biogenesis
GAMIOLLD_01018 9.44e-187 rluB 5.4.99.19, 5.4.99.22 - J ko:K06178,ko:K06183 - ko00000,ko01000,ko03009 Belongs to the pseudouridine synthase RsuA family
GAMIOLLD_01019 9.88e-167 - - - U ko:K06188 - ko00000,ko02000 Belongs to the MIP aquaporin (TC 1.A.8) family
GAMIOLLD_01020 5.17e-56 - - - - - - - -
GAMIOLLD_01021 0.0 purH 2.1.2.3, 3.5.4.10 - F ko:K00602 ko00230,ko00670,ko01100,ko01110,ko01130,ko01523,map00230,map00670,map01100,map01110,map01130,map01523 ko00000,ko00001,ko00002,ko01000,ko04147 Bifunctional purine biosynthesis protein PurH
GAMIOLLD_01022 2.72e-314 - - - - - - - -
GAMIOLLD_01023 4.72e-212 sucD 6.2.1.5 - C ko:K01902 ko00020,ko00640,ko00660,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00640,map00660,map00720,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
GAMIOLLD_01024 2.85e-285 sucC 6.2.1.5 - F ko:K01903 ko00020,ko00640,ko00660,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00640,map00660,map00720,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit
GAMIOLLD_01025 3.9e-131 apt 2.4.2.7 - F ko:K00759 ko00230,ko01100,map00230,map01100 ko00000,ko00001,ko01000,ko04147 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
GAMIOLLD_01026 3.73e-72 yajC - - U ko:K03210 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Preprotein translocase subunit
GAMIOLLD_01027 6.91e-259 ruvB 3.6.4.12 - L ko:K03551 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
GAMIOLLD_01028 1.83e-135 ruvA 3.6.4.12 - L ko:K03550 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
GAMIOLLD_01029 2.64e-129 ruvC 3.1.22.4 - L ko:K01159 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
GAMIOLLD_01030 2.79e-176 yebC - - K - - - transcriptional regulatory protein
GAMIOLLD_01031 0.0 - 3.2.1.52 GH20 M ko:K12373 ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142 ko00000,ko00001,ko00002,ko01000,ko03110 Glycosyl hydrolase family 20, catalytic domain
GAMIOLLD_01032 0.0 thrS 6.1.1.3 - J ko:K01868 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
GAMIOLLD_01033 0.0 - - - U ko:K06956 - ko00000 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
GAMIOLLD_01036 0.0 - - - - - - - -
GAMIOLLD_01040 2.89e-199 - - - S - - - PAC2 family
GAMIOLLD_01041 8.18e-216 uppP 3.6.1.27 - V ko:K06153 ko00550,map00550 ko00000,ko00001,ko01000,ko01011 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
GAMIOLLD_01042 8.17e-204 - - - G - - - Fructosamine kinase
GAMIOLLD_01043 6.31e-273 dnaJ - - O ko:K03686 - ko00000,ko03029,ko03110 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
GAMIOLLD_01044 1.07e-284 hrcA - - K ko:K03705 - ko00000,ko03000 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
GAMIOLLD_01045 0.0 tkt 2.2.1.1 - H ko:K00615 ko00030,ko00710,ko01051,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01051,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the transketolase family
GAMIOLLD_01046 4.49e-258 tal 2.2.1.2 - H ko:K00616 ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
GAMIOLLD_01047 3.12e-182 - - - S - - - Protein of unknown function (DUF1275)
GAMIOLLD_01048 0.0 brnQ - - U ko:K03311 - ko00000 Component of the transport system for branched-chain amino acids
GAMIOLLD_01051 8.61e-308 - - - V - - - MatE
GAMIOLLD_01052 3.47e-208 - - - S - - - Sucrose-6F-phosphate phosphohydrolase
GAMIOLLD_01053 1.18e-225 ldh 1.1.1.27 - C ko:K00016 ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922 ko00000,ko00001,ko01000,ko04147 Belongs to the LDH MDH superfamily
GAMIOLLD_01054 1.2e-45 secG - - U ko:K03075 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Preprotein translocase SecG subunit
GAMIOLLD_01055 5.46e-189 tpiA 5.3.1.1 - G ko:K01803 ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko04147 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
GAMIOLLD_01056 6.71e-284 pgk 2.7.2.3, 5.3.1.1 - F ko:K00927,ko:K01803 ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko04147 Phosphoglycerate kinase
GAMIOLLD_01057 1.32e-221 whiA - - K ko:K09762 - ko00000 May be required for sporulation
GAMIOLLD_01058 3.02e-227 yvcJ - - S ko:K06958 - ko00000,ko03019 Displays ATPase and GTPase activities
GAMIOLLD_01059 2.49e-229 aroE 1.1.1.25 - E ko:K00014 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Shikimate dehydrogenase substrate binding domain
GAMIOLLD_01060 0.0 uvrC - - L ko:K03703 ko03420,map03420 ko00000,ko00001,ko03400 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
GAMIOLLD_01061 0.0 uvrA - - L ko:K03701 ko03420,map03420 ko00000,ko00001,ko03400 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
GAMIOLLD_01062 6.79e-119 - - - - - - - -
GAMIOLLD_01063 6.28e-77 - - - V ko:K02004 - ko00000,ko00002,ko02000 MacB-like periplasmic core domain
GAMIOLLD_01064 1.82e-64 - - - K - - - Transcriptional regulatory protein, C terminal
GAMIOLLD_01065 3.2e-47 - - - K - - - Transcriptional regulatory protein, C terminal
GAMIOLLD_01066 1.04e-315 - 2.7.13.3 - T ko:K18351 ko01502,ko02020,map01502,map02020 ko00000,ko00001,ko00002,ko01000,ko01001,ko01504,ko02022 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
GAMIOLLD_01067 2.4e-180 - 3.4.17.14 - M ko:K07260 ko00550,ko01100,ko01502,ko02020,map00550,map01100,map01502,map02020 ko00000,ko00001,ko00002,ko01000,ko01002,ko01011,ko01504 D-alanyl-D-alanine carboxypeptidase
GAMIOLLD_01068 0.0 ybiT - - S ko:K06158 - ko00000,ko03012 ABC transporter
GAMIOLLD_01069 1.68e-253 galE 5.1.3.2 - M ko:K01784 ko00052,ko00520,ko01100,map00052,map00520,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the NAD(P)-dependent epimerase dehydratase family
GAMIOLLD_01070 0.0 galT 2.7.7.12 - G ko:K00965 ko00052,ko00520,ko01100,ko04917,map00052,map00520,map01100,map04917 ko00000,ko00001,ko00002,ko01000 UDP-glucose--hexose-1-phosphate uridylyltransferase
GAMIOLLD_01071 1.41e-263 - 2.7.1.162 - S ko:K13059 - ko00000,ko01000 Phosphotransferase enzyme family
GAMIOLLD_01072 1.28e-277 - - - GK - - - ROK family
GAMIOLLD_01073 4.48e-228 - 2.7.1.2 - GK ko:K00845 ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 ROK family
GAMIOLLD_01074 0.0 gnpA 2.4.1.211 - S ko:K15533 - ko00000,ko01000 Lacto-N-biose phosphorylase C-terminal domain
GAMIOLLD_01075 4.73e-216 - - - G ko:K02026 - ko00000,ko00002,ko02000 ABC transporter permease
GAMIOLLD_01076 5.59e-223 - - - G ko:K02025 - ko00000,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
GAMIOLLD_01077 5e-310 - - - G ko:K02027 - ko00000,ko00002,ko02000 Bacterial extracellular solute-binding protein
GAMIOLLD_01078 0.0 trpE 4.1.3.27 - E ko:K01657 ko00400,ko00405,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00400,map00405,map01100,map01110,map01130,map01230,map02024,map02025 ko00000,ko00001,ko00002,ko01000 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
GAMIOLLD_01079 4.17e-97 hisI 3.5.4.19, 3.6.1.31 - E ko:K01496,ko:K11755 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
GAMIOLLD_01080 1.82e-179 hisF 4.1.3.27 - E ko:K01657,ko:K02500 ko00340,ko00400,ko00405,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00340,map00400,map00405,map01100,map01110,map01130,map01230,map02024,map02025 ko00000,ko00001,ko00002,ko01000 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
GAMIOLLD_01081 1.21e-288 rlmN 2.1.1.192 - J ko:K06941 - ko00000,ko01000,ko03009 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs
GAMIOLLD_01082 1.27e-226 cdsA 2.7.7.41 - I ko:K00981 ko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070 ko00000,ko00001,ko00002,ko01000 Cytidylyltransferase family
GAMIOLLD_01083 7.62e-120 frr - - J ko:K02838 - ko00000,ko03012 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
GAMIOLLD_01084 6.31e-171 pyrH 2.7.4.22 - F ko:K09903 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko01000 Catalyzes the reversible phosphorylation of UMP to UDP
GAMIOLLD_01085 3.16e-164 - - - S - - - alpha beta
GAMIOLLD_01086 4.78e-188 tsf - - J ko:K02357 - ko00000,ko03012,ko03029 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
GAMIOLLD_01087 3.07e-188 rpsB - - J ko:K02967 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the universal ribosomal protein uS2 family
GAMIOLLD_01088 1.05e-113 def 3.5.1.88 - J ko:K01462 - ko00000,ko01000 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
GAMIOLLD_01089 0.0 fadD3 6.2.1.3 - I ko:K01897 ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920 ko00000,ko00001,ko00002,ko01000,ko01004,ko04147 long-chain-fatty acid CoA ligase
GAMIOLLD_01090 5.1e-118 - - - - - - - -
GAMIOLLD_01091 1.59e-255 guaB3 1.1.1.205 - F ko:K00088 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko04147 IMP dehydrogenase family protein
GAMIOLLD_01092 1.35e-306 icd 1.1.1.42 - C ko:K00031 ko00020,ko00480,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,ko04146,map00020,map00480,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230,map04146 br01601,ko00000,ko00001,ko00002,ko01000 Belongs to the isocitrate and isopropylmalate dehydrogenases family
GAMIOLLD_01093 0.0 - - - G - - - ABC transporter substrate-binding protein
GAMIOLLD_01094 0.0 fadD1 6.2.1.3 - I ko:K01897 ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920 ko00000,ko00001,ko00002,ko01000,ko01004,ko04147 AMP-binding enzyme
GAMIOLLD_01095 5.42e-166 - - - M - - - Peptidase family M23
GAMIOLLD_01097 2.66e-249 tsaD 2.3.1.234 - O ko:K01409 - ko00000,ko01000,ko03016 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
GAMIOLLD_01098 9.98e-134 rimI 2.3.1.128 - K ko:K03789 - ko00000,ko01000,ko03009 FR47-like protein
GAMIOLLD_01099 4.89e-204 yeaZ - - O ko:K14742 - ko00000,ko03016 Glycoprotease family
GAMIOLLD_01100 3.13e-153 tsaE - - S ko:K06925 - ko00000,ko03016 Threonylcarbamoyl adenosine biosynthesis protein TsaE
GAMIOLLD_01101 2.59e-232 holA 2.7.7.7 - L ko:K02340 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase III delta subunit
GAMIOLLD_01102 0.0 comEC - - S ko:K02238 - ko00000,ko00002,ko02044 Competence protein
GAMIOLLD_01103 1.08e-160 comEA - - L ko:K02237 - ko00000,ko00002,ko02044 Helix-hairpin-helix motif
GAMIOLLD_01104 0.0 leuS 6.1.1.4 - J ko:K01869 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Belongs to the class-I aminoacyl-tRNA synthetase family
GAMIOLLD_01105 3.75e-214 - - - ET ko:K10005 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Bacterial periplasmic substrate-binding proteins
GAMIOLLD_01106 1.72e-218 corA - - P ko:K03284 - ko00000,ko02000 CorA-like Mg2+ transporter protein
GAMIOLLD_01107 4.05e-207 gpmB 3.1.3.85, 5.4.2.11 - G ko:K01834,ko:K22306 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Phosphoglycerate mutase family
GAMIOLLD_01108 0.0 - - - E - - - Serine carboxypeptidase
GAMIOLLD_01109 0.0 - - - S - - - Psort location Cytoplasmic, score 8.87
GAMIOLLD_01110 5.99e-184 - - - S - - - Domain of unknown function (DUF4194)
GAMIOLLD_01111 0.0 - - - S - - - Psort location Cytoplasmic, score 8.87
GAMIOLLD_01112 4.92e-206 nfo 3.1.21.2 - L ko:K01151 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
GAMIOLLD_01113 9.61e-84 - - - K - - - Protein of unknown function, DUF488
GAMIOLLD_01114 1.81e-155 - - - J - - - Acetyltransferase (GNAT) domain
GAMIOLLD_01115 1.12e-126 - - - K - - - FR47-like protein
GAMIOLLD_01116 1.29e-72 - - - K - - - Transcriptional regulator
GAMIOLLD_01117 9.65e-50 - - - F - - - Hydrolase of X-linked nucleoside diphosphate N terminal
GAMIOLLD_01119 4.46e-46 - - - S - - - Carbon-nitrogen hydrolase
GAMIOLLD_01121 4.18e-237 - - - S - - - Acetyltransferase (GNAT) domain
GAMIOLLD_01122 2.57e-99 qseC 2.7.13.3 - T ko:K02484,ko:K07637,ko:K07643,ko:K07645,ko:K07649,ko:K07653,ko:K18351 ko01502,ko01503,ko02020,ko02024,map01502,map01503,map02020,map02024 ko00000,ko00001,ko00002,ko01000,ko01001,ko01504,ko02022 Histidine kinase
GAMIOLLD_01123 8.42e-172 - - - S - - - SOS response associated peptidase (SRAP)
GAMIOLLD_01124 8.05e-166 - - - - - - - -
GAMIOLLD_01125 3.92e-105 gloA - - E - - - Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
GAMIOLLD_01126 5.39e-224 - - - M - - - heme binding
GAMIOLLD_01127 3.19e-38 - - - EGP ko:K03446,ko:K03466,ko:K03762,ko:K08217 - br01600,ko00000,ko00002,ko01504,ko02000,ko03036 Major facilitator Superfamily
GAMIOLLD_01128 1.35e-127 - - - EGP ko:K08217 - br01600,ko00000,ko01504,ko02000 Transmembrane secretion effector
GAMIOLLD_01130 8.07e-200 - - - - - - - -
GAMIOLLD_01131 2.31e-14 - - - CE ko:K03294 - ko00000 Amino acid permease
GAMIOLLD_01132 4.8e-137 - - - S - - - Putative ABC-transporter type IV
GAMIOLLD_01133 8.17e-141 - 1.6.5.2 - S ko:K00355 ko00130,ko01110,ko05200,ko05225,ko05418,map00130,map01110,map05200,map05225,map05418 ko00000,ko00001,ko01000 NADPH-dependent FMN reductase
GAMIOLLD_01134 1.31e-245 - - - V - - - VanZ like family
GAMIOLLD_01135 1.1e-188 - - - KT - - - RESPONSE REGULATOR receiver
GAMIOLLD_01136 3.34e-92 pdxH - - S ko:K07006 - ko00000 Pfam:Pyridox_oxidase
GAMIOLLD_01137 2.53e-187 - - - S ko:K09974 - ko00000 Domain of unknown function (DUF1287)
GAMIOLLD_01138 6.92e-171 - - - C - - - Putative TM nitroreductase
GAMIOLLD_01139 5.43e-164 - - - - - - - -
GAMIOLLD_01141 0.0 treS_1 - - G - - - Alpha amylase, catalytic domain
GAMIOLLD_01142 1.08e-101 - - - S - - - Bacterial PH domain
GAMIOLLD_01143 2.34e-177 gpmB 3.1.3.85, 5.4.2.11 - G ko:K01834,ko:K22306 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Phosphoglycerate mutase family
GAMIOLLD_01144 1.05e-89 rsfS - - J ko:K09710 - ko00000,ko03009 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
GAMIOLLD_01145 0.0 glmU 2.3.1.157, 2.7.7.23 - M ko:K04042 ko00520,ko01100,ko01130,map00520,map01100,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
GAMIOLLD_01147 6.24e-244 prs 2.7.6.1 - F ko:K00948 ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
GAMIOLLD_01148 3.43e-186 nadD 2.7.7.18 - H ko:K00969 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
GAMIOLLD_01149 1.48e-119 - - - - - - - -
GAMIOLLD_01150 1.39e-297 proA 1.2.1.41 - E ko:K00147 ko00330,ko00332,ko01100,ko01110,ko01130,ko01230,map00330,map00332,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
GAMIOLLD_01151 0.0 thrC 4.2.3.1 - E ko:K01733 ko00260,ko00750,ko01100,ko01110,ko01120,ko01230,map00260,map00750,map01100,map01110,map01120,map01230 ko00000,ko00001,ko00002,ko01000 Threonine synthase N terminus
GAMIOLLD_01152 3.24e-158 - - - S - - - ABC-2 family transporter protein
GAMIOLLD_01153 3.23e-153 - - - S - - - ABC-2 family transporter protein
GAMIOLLD_01154 1.74e-224 - - - V ko:K01990 - ko00000,ko00002,ko02000 ATPases associated with a variety of cellular activities
GAMIOLLD_01155 9.53e-76 - - - K ko:K07979 - ko00000,ko03000 helix_turn_helix gluconate operon transcriptional repressor
GAMIOLLD_01156 3.57e-158 - - - S - - - Haloacid dehalogenase-like hydrolase
GAMIOLLD_01157 0.0 recN - - L ko:K03631 - ko00000,ko03400 May be involved in recombinational repair of damaged DNA
GAMIOLLD_01158 3.15e-235 nadK 2.7.1.23 - H ko:K00858 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko01000 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
GAMIOLLD_01159 3.41e-316 trkH - - P ko:K03498 - ko00000,ko02000 Cation transport protein
GAMIOLLD_01160 5.24e-150 trkA - - P ko:K03499 - ko00000,ko02000 TrkA-N domain
GAMIOLLD_01161 4.57e-143 - - - - - - - -
GAMIOLLD_01162 3.26e-175 tlyA 2.1.1.226, 2.1.1.227 - J ko:K06442 - ko00000,ko01000,ko03009 Ribosomal RNA large subunit methyltransferase J
GAMIOLLD_01164 1.53e-242 - - - G - - - Haloacid dehalogenase-like hydrolase
GAMIOLLD_01165 2.2e-272 - - - L - - - Tetratricopeptide repeat
GAMIOLLD_01166 0.0 tyrS 6.1.1.1 - J ko:K01866 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
GAMIOLLD_01167 1.44e-184 - - - S - - - Putative ABC-transporter type IV
GAMIOLLD_01168 1.6e-140 - - - S ko:K06950 - ko00000 Metal dependent phosphohydrolases with conserved 'HD' motif.
GAMIOLLD_01169 0.0 argH 4.3.2.1 - E ko:K01755 ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,map00220,map00250,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000,ko04147 argininosuccinate lyase
GAMIOLLD_01170 0.0 hsdR 3.1.21.3 - V ko:K01153 - ko00000,ko01000,ko02048 Subunit R is required for both nuclease and ATPase activities, but not for modification
GAMIOLLD_01171 0.0 - - - K - - - Putative DNA-binding domain
GAMIOLLD_01172 2.49e-129 - 3.1.21.3 - V ko:K01154 - ko00000,ko01000,ko02048 type I restriction modification DNA specificity domain
GAMIOLLD_01173 0.0 hsdM 2.1.1.72 - V ko:K03427 - ko00000,ko01000,ko02048 modification (methylase) protein of type I restriction-modification system K03427
GAMIOLLD_01174 3.67e-198 - - - S - - - Domain of unknown function (DUF4357)
GAMIOLLD_01175 2e-41 - - - - - - - -
GAMIOLLD_01176 8.68e-229 - - - L - - - Phage integrase family
GAMIOLLD_01177 5.96e-304 argG 6.3.4.5 - E ko:K01940 ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,ko05418,map00220,map00250,map01100,map01110,map01130,map01230,map05418 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the argininosuccinate synthase family. Type 1 subfamily
GAMIOLLD_01178 1.29e-112 argR - - K ko:K03402 - ko00000,ko03000 Regulates arginine biosynthesis genes
GAMIOLLD_01179 2.51e-234 argF 2.1.3.3 - E ko:K00611 ko00220,ko01100,ko01110,ko01130,ko01230,map00220,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
GAMIOLLD_01180 1.97e-313 argD 2.6.1.11, 2.6.1.17 - E ko:K00821 ko00220,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00220,map00300,map01100,map01110,map01120,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Aminotransferase class-III
GAMIOLLD_01181 1.18e-226 argB 2.7.2.8 - E ko:K00930 ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the acetylglutamate kinase family. ArgB subfamily
GAMIOLLD_01182 4.99e-273 argJ 2.3.1.1, 2.3.1.35 - E ko:K00620 ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
GAMIOLLD_01183 3.05e-259 argC 1.2.1.38 - E ko:K00145 ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
GAMIOLLD_01184 3.52e-133 - - - - - - - -
GAMIOLLD_01185 0.0 pheT 6.1.1.20 - J ko:K01890 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Phenylalanyl-tRNA synthetase beta
GAMIOLLD_01186 1.51e-259 pheS 6.1.1.20 - J ko:K01889 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
GAMIOLLD_01187 1.35e-206 tsnR - - J ko:K03437 - ko00000,ko03016 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
GAMIOLLD_01188 5.84e-174 - - - V ko:K02068 - ko00000,ko00002,ko02000 ATPases associated with a variety of cellular activities
GAMIOLLD_01189 9.25e-176 - - - V ko:K02069 - ko00000,ko00002,ko02000 Uncharacterised protein family (UPF0014)
GAMIOLLD_01190 7.28e-71 - - - IQ - - - oxidoreductase activity
GAMIOLLD_01192 2.24e-99 - - - K - - - AraC-like ligand binding domain
GAMIOLLD_01193 1.12e-303 rutG - - F ko:K02824,ko:K03458 - ko00000,ko02000 Permease family
GAMIOLLD_01194 1.72e-204 - - - G - - - Phosphoglycerate mutase family
GAMIOLLD_01195 6.42e-240 - - - S - - - Conserved hypothetical protein 698
GAMIOLLD_01196 5.43e-188 - - - K - - - Bacterial regulatory helix-turn-helix protein, lysR family
GAMIOLLD_01197 1.52e-151 - - - E - - - haloacid dehalogenase-like hydrolase
GAMIOLLD_01198 0.0 - - - M - - - Glycosyltransferase like family 2
GAMIOLLD_01200 0.0 - 2.7.11.1 - S ko:K12132 - ko00000,ko01000,ko01001 PASTA domain
GAMIOLLD_01201 2.79e-169 - 2.7.11.1 - S ko:K12132 - ko00000,ko01000,ko01001 PASTA domain
GAMIOLLD_01202 2.6e-161 - - - S ko:K06999 - ko00000 Phospholipase/Carboxylesterase
GAMIOLLD_01203 1.5e-96 fms 3.5.1.88 - J ko:K01462 - ko00000,ko01000 Removes the formyl group from the N-terminal Met of newly synthesized proteins
GAMIOLLD_01204 1.59e-48 - - - - - - - -
GAMIOLLD_01205 2.36e-46 - - - S ko:K07069 - ko00000 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082)
GAMIOLLD_01206 7.03e-86 - - - S - - - Zincin-like metallopeptidase
GAMIOLLD_01207 5.22e-111 - - - S - - - Helix-turn-helix
GAMIOLLD_01208 2.58e-262 - - - S - - - Short C-terminal domain
GAMIOLLD_01209 1.1e-30 - - - - - - - -
GAMIOLLD_01211 6.04e-103 - - - K - - - Psort location Cytoplasmic, score
GAMIOLLD_01212 0.0 - - - KLT - - - Protein tyrosine kinase
GAMIOLLD_01213 4.93e-107 - - - S - - - Cupin 2, conserved barrel domain protein
GAMIOLLD_01214 6.35e-201 - - - J - - - Methyltransferase domain
GAMIOLLD_01215 5.59e-78 yccF - - S - - - Inner membrane component domain
GAMIOLLD_01216 2.73e-162 - - - E - - - Psort location Cytoplasmic, score 8.87
GAMIOLLD_01217 1.59e-45 - - - L ko:K07483 - ko00000 Psort location Cytoplasmic, score 8.87
GAMIOLLD_01218 1.74e-75 - - - S - - - pathogenesis
GAMIOLLD_01219 6.03e-86 - - - - - - - -
GAMIOLLD_01222 1.71e-116 - 5.99.1.2 - L ko:K03169 - ko00000,ko01000,ko03032 DNA topoisomerase
GAMIOLLD_01223 1.29e-108 - 5.99.1.2 - L ko:K03169 - ko00000,ko01000,ko03032 DNA topoisomerase
GAMIOLLD_01226 1.31e-107 nanE 5.1.3.9 - G ko:K01788 ko00520,map00520 ko00000,ko00001,ko01000 Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
GAMIOLLD_01227 1.65e-72 - 2.7.1.2 - GK ko:K00845 ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 ROK family
GAMIOLLD_01228 2.6e-130 - - - S - - - Protein of unknown function (DUF4127)
GAMIOLLD_01229 2.14e-119 - - - G ko:K02026 - ko00000,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
GAMIOLLD_01230 2.78e-177 rfbP - - M - - - Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
GAMIOLLD_01231 0.0 - - - U - - - Drug resistance MFS transporter, drug H antiporter-2 family
GAMIOLLD_01232 2.06e-297 mntH - - P ko:K03322 - ko00000,ko02000 H( )-stimulated, divalent metal cation uptake system
GAMIOLLD_01233 2.77e-158 - - - L - - - Protein of unknown function (DUF1524)
GAMIOLLD_01234 5.17e-218 - - - S - - - Oxidoreductase, aldo keto reductase family protein
GAMIOLLD_01235 1.24e-13 chiA 3.1.6.1, 3.2.1.14, 3.2.1.17, 3.2.1.23, 3.2.1.4 AA10,CBM15,CBM73,GH18,GH5,GH9 S ko:K01130,ko:K01179,ko:K01183,ko:K01190,ko:K03933,ko:K12308,ko:K13381 ko00052,ko00140,ko00500,ko00511,ko00520,ko00600,ko01100,map00052,map00140,map00500,map00511,map00520,map00600,map01100 ko00000,ko00001,ko01000 dextransucrase activity
GAMIOLLD_01236 7.62e-257 - - - K - - - helix_turn _helix lactose operon repressor
GAMIOLLD_01237 4.82e-305 - - - G - - - Glycosyl hydrolases family 43
GAMIOLLD_01240 1.91e-142 pdxT 4.3.3.6 - H ko:K08681 ko00750,map00750 ko00000,ko00001,ko01000 Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
GAMIOLLD_01241 8.26e-199 pdxS 4.3.3.6 - H ko:K06215 ko00750,map00750 ko00000,ko00001,ko01000 Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
GAMIOLLD_01242 0.0 fadD 6.2.1.3 - I ko:K01897 ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920 ko00000,ko00001,ko00002,ko01000,ko01004,ko04147 AMP-binding enzyme
GAMIOLLD_01243 3.09e-267 - - - K - - - helix_turn _helix lactose operon repressor
GAMIOLLD_01244 3.03e-166 rnhB 3.1.26.4 - L ko:K03470 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
GAMIOLLD_01245 2.72e-197 lepB 3.4.21.89 - U ko:K03100 ko02024,ko03060,map02024,map03060 ko00000,ko00001,ko01000,ko01002 Belongs to the peptidase S26 family
GAMIOLLD_01246 2.33e-81 rplS - - J ko:K02884 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
GAMIOLLD_01247 4.86e-166 araD 5.1.3.4 - G ko:K03077 ko00040,ko00053,ko01100,ko01120,map00040,map00053,map01100,map01120 ko00000,ko00001,ko00002,ko01000 Class II Aldolase and Adducin N-terminal domain
GAMIOLLD_01248 6.29e-220 - 5.1.3.22 - G ko:K03079 ko00040,ko00053,ko01100,ko01120,map00040,map00053,map01100,map01120 ko00000,ko00001,ko00002,ko01000 Xylose isomerase-like TIM barrel
GAMIOLLD_01249 0.0 - 2.7.1.53 - G ko:K00880 ko00040,ko00053,map00040,map00053 ko00000,ko00001,ko01000 FGGY family of carbohydrate kinases, C-terminal domain
GAMIOLLD_01250 1.46e-283 - - - G ko:K02775 ko00052,ko01100,ko02060,map00052,map01100,map02060 ko00000,ko00001,ko00002,ko02000 PTS system sugar-specific permease component
GAMIOLLD_01251 2.02e-220 - - - K - - - Putative sugar-binding domain
GAMIOLLD_01253 0.0 - - - P ko:K02050 - ko00000,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
GAMIOLLD_01254 0.0 - - - P ko:K02049 - ko00000,ko00002,ko02000 ATPases associated with a variety of cellular activities
GAMIOLLD_01255 1e-28 mgtA 3.6.3.2 - P ko:K01531 - ko00000,ko01000 Cation transporting ATPase, C-terminus
GAMIOLLD_01256 4.43e-40 mgtA 3.6.3.2 - P ko:K01531 - ko00000,ko01000 Cation transporting ATPase, C-terminus
GAMIOLLD_01257 3.02e-38 mgtA 3.6.3.2 - P ko:K01531 - ko00000,ko01000 Cation transporting ATPase, C-terminus
GAMIOLLD_01258 0.0 mgtA 3.6.3.2 - P ko:K01531 - ko00000,ko01000 Cation transporting ATPase, C-terminus
GAMIOLLD_01259 4.87e-155 mgtC - - S ko:K07507 - ko00000,ko02000 MgtC family
GAMIOLLD_01261 6.19e-263 - - - - - - - -
GAMIOLLD_01263 6.97e-271 - - - - - - - -
GAMIOLLD_01264 0.0 pgi 5.3.1.9 - G ko:K01810 ko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the GPI family
GAMIOLLD_01267 2.67e-226 - - - S ko:K07088 - ko00000 Auxin Efflux Carrier
GAMIOLLD_01268 1.14e-151 rdgB 3.6.1.66 - F ko:K02428 ko00230,map00230 ko00000,ko00001,ko01000 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
GAMIOLLD_01269 6.69e-173 rph 2.7.7.56 - J ko:K00989 - ko00000,ko01000,ko03016 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
GAMIOLLD_01270 1.65e-314 pncB 6.3.4.21 - F ko:K00763 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko01000 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
GAMIOLLD_01272 1.26e-118 ilvN 2.2.1.6 - E ko:K01653 ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 ACT domain
GAMIOLLD_01273 0.0 ilvB 2.2.1.6 - H ko:K01652 ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Thiamine pyrophosphate enzyme, central domain
GAMIOLLD_01274 1.56e-179 rnc 3.1.26.3 - J ko:K03685 ko03008,ko05205,map03008,map05205 ko00000,ko00001,ko01000,ko03009,ko03019,ko03036 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
GAMIOLLD_01275 2.72e-34 rpmF - - J ko:K02911 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011,ko03029 Belongs to the bacterial ribosomal protein bL32 family
GAMIOLLD_01276 2.17e-147 - - - S ko:K07040 - ko00000 Uncharacterized ACR, COG1399
GAMIOLLD_01277 6.08e-184 - - - - - - - -
GAMIOLLD_01278 4.42e-116 coaD 2.7.7.3 - H ko:K00954 ko00770,ko01100,map00770,map01100 ko00000,ko00001,ko00002,ko01000 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
GAMIOLLD_01279 1.04e-76 - - - S - - - Protein of unknown function (DUF3039)
GAMIOLLD_01280 0.0 yjjK - - S ko:K15738 - ko00000,ko02000 ABC transporter
GAMIOLLD_01281 8.06e-175 - 6.3.5.2 - F ko:K01951 ko00230,ko00983,ko01100,map00230,map00983,map01100 ko00000,ko00001,ko00002,ko01000,ko01002 Peptidase C26
GAMIOLLD_01282 0.0 cysS 6.1.1.16 - J ko:K01883 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the class-I aminoacyl-tRNA synthetase family
GAMIOLLD_01283 4.14e-212 - - - P - - - Cation efflux family
GAMIOLLD_01284 0.0 ffh 3.6.5.4 - U ko:K03106 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko01000,ko02044 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
GAMIOLLD_01285 7.16e-278 - - - S - - - Endonuclease/Exonuclease/phosphatase family
GAMIOLLD_01286 1.36e-131 - - - S ko:K06895 - ko00000,ko02000 LysE type translocator
GAMIOLLD_01287 0.0 - - - EK ko:K05825,ko:K18907 ko00300,ko01100,ko01130,ko01210,map00300,map01100,map01130,map01210 ko00000,ko00001,ko00002,ko01000,ko01504,ko03000 Alanine-glyoxylate amino-transferase
GAMIOLLD_01288 5.38e-78 rpsP - - J ko:K02959 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011,ko03029 Belongs to the bacterial ribosomal protein bS16 family
GAMIOLLD_01289 3.56e-47 - - - S ko:K06960 - ko00000 Belongs to the UPF0109 family
GAMIOLLD_01290 3.22e-139 rimM - - J ko:K02860 - ko00000,ko03009 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
GAMIOLLD_01291 3.51e-226 trmD 2.1.1.228 - J ko:K00554 - ko00000,ko01000,ko03016 Belongs to the RNA methyltransferase TrmD family
GAMIOLLD_01292 3.74e-108 - - - O - - - Hsp20/alpha crystallin family
GAMIOLLD_01293 9.16e-138 - - - S ko:K07078 - ko00000 Nitroreductase family
GAMIOLLD_01294 1.95e-158 rsmD 2.1.1.171 - L ko:K08316 - ko00000,ko01000,ko03009 Conserved hypothetical protein 95
GAMIOLLD_01295 0.0 - - - U ko:K06956 - ko00000 Sodium:dicarboxylate symporter family
GAMIOLLD_01296 0.0 - - - - - - - -
GAMIOLLD_01299 4.56e-274 steT - - E ko:K03294 - ko00000 amino acid
GAMIOLLD_01300 0.0 recG 3.6.4.12 - L ko:K03655 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 helicase superfamily c-terminal domain
GAMIOLLD_01301 7.42e-41 rpmB - - J ko:K02902 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal L28 family
GAMIOLLD_01302 3.14e-255 - - - G - - - pfkB family carbohydrate kinase
GAMIOLLD_01304 2.12e-309 - - - S ko:K06902 ko04138,map04138 ko00000,ko00001,ko02000,ko04131 Vacuole effluxer Atg22 like
GAMIOLLD_01305 2.66e-167 - - - K - - - helix_turn_helix, mercury resistance
GAMIOLLD_01306 1.65e-78 - - - T - - - Toxic component of a toxin-antitoxin (TA) module
GAMIOLLD_01307 7.21e-72 - - - L - - - RelB antitoxin
GAMIOLLD_01308 5.52e-47 - - - I - - - carboxylic ester hydrolase activity
GAMIOLLD_01309 1.77e-300 - - - K - - - Helix-turn-helix XRE-family like proteins
GAMIOLLD_01310 6.65e-183 tam 2.1.1.144 - S ko:K00598 - ko00000,ko01000 Methyltransferase domain
GAMIOLLD_01315 0.00013 - - - TV ko:K05792 - ko00000 HNH endonuclease
GAMIOLLD_01316 0.0 - 6.2.1.3 - I ko:K01897 ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920 ko00000,ko00001,ko00002,ko01000,ko01004,ko04147 AMP-binding enzyme
GAMIOLLD_01317 3.83e-11 - - - K - - - Transcriptional regulator
GAMIOLLD_01319 3.83e-53 - - - M - - - Belongs to the glycosyl hydrolase 28 family
GAMIOLLD_01320 2.45e-95 - - - - - - - -
GAMIOLLD_01321 1.67e-295 - 2.6.1.1 - E ko:K11358 ko00220,ko00250,ko00270,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko01000,ko01007 Psort location Cytoplasmic, score 8.87
GAMIOLLD_01322 3.35e-307 - - - S - - - Psort location Cytoplasmic, score 8.87
GAMIOLLD_01323 1.51e-153 - - - K - - - Bacterial regulatory proteins, tetR family
GAMIOLLD_01324 2.97e-169 - - - M - - - Mechanosensitive ion channel
GAMIOLLD_01325 0.0 clpB - - O ko:K03695,ko:K03696 ko01100,ko04213,map01100,map04213 ko00000,ko00001,ko03110 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
GAMIOLLD_01326 1.41e-199 - - - Q - - - Fumarylacetoacetate (FAA) hydrolase family
GAMIOLLD_01327 1.05e-174 - - - S - - - Domain of unknown function (DUF4854)
GAMIOLLD_01328 6.8e-273 - 3.4.22.70 - M ko:K07284 - ko00000,ko01000,ko01002,ko01011 Sortase family
GAMIOLLD_01329 0.0 - - - M - - - LPXTG cell wall anchor motif
GAMIOLLD_01330 0.0 - - - M - - - domain protein
GAMIOLLD_01331 2.45e-70 acyP 3.6.1.7 - C ko:K01512 ko00620,ko00627,ko01120,map00620,map00627,map01120 ko00000,ko00001,ko01000 Acylphosphatase
GAMIOLLD_01332 2.58e-190 - - - S ko:K06997 - ko00000 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
GAMIOLLD_01333 5.99e-237 gluQ 6.1.1.17 - J ko:K01885 ko00860,ko00970,ko01100,ko01110,ko01120,map00860,map00970,map01100,map01110,map01120 ko00000,ko00001,ko00002,ko01000,ko01007,ko02048,ko03016 Belongs to the class-I aminoacyl-tRNA synthetase family
GAMIOLLD_01334 3.2e-176 - - - M - - - Protein of unknown function (DUF3152)
GAMIOLLD_01335 3.99e-176 glpF - - U ko:K02440 - ko00000,ko02000 Belongs to the MIP aquaporin (TC 1.A.8) family
GAMIOLLD_01338 9.29e-85 - - - E - - - Domain of unknown function (DUF5011)
GAMIOLLD_01339 2.34e-92 rplI - - J ko:K02939 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds to the 23S rRNA
GAMIOLLD_01340 1.51e-48 rpsR - - J ko:K02963 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
GAMIOLLD_01341 7.91e-111 ssb - - L ko:K03111 ko03030,ko03430,ko03440,map03030,map03430,map03440 ko00000,ko00001,ko03029,ko03032,ko03400 Single-stranded DNA-binding protein
GAMIOLLD_01342 6.47e-64 rpsF - - J ko:K02990 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011,ko03029 Binds together with S18 to 16S ribosomal RNA
GAMIOLLD_01343 1e-243 - - - T - - - Pfam Adenylate and Guanylate cyclase catalytic domain
GAMIOLLD_01344 1.41e-92 - - - - - - - -
GAMIOLLD_01345 4.67e-48 - - - - - - - -
GAMIOLLD_01346 0.0 - - - D - - - Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
GAMIOLLD_01347 5.34e-244 prs 2.7.6.1 - F ko:K00948 ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
GAMIOLLD_01348 0.0 - 3.2.1.97 GH101 G ko:K17624 - ko00000,ko01000 Glycosyl hydrolase 101 beta sandwich domain
GAMIOLLD_01349 1.28e-254 glpQ 3.1.4.46 - C ko:K01126 ko00564,map00564 ko00000,ko00001,ko01000 Glycerophosphoryl diester phosphodiesterase family
GAMIOLLD_01350 1.42e-278 ddl 6.3.2.4 - F ko:K01921 ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502 ko00000,ko00001,ko01000,ko01011 Belongs to the D-alanine--D-alanine ligase family
GAMIOLLD_01351 1.38e-227 gpsA 1.1.1.94 - I ko:K00057 ko00564,ko01110,map00564,map01110 ko00000,ko00001,ko01000 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
GAMIOLLD_01352 1.04e-220 plsC2 2.3.1.51 - I ko:K00655 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko01004 Phosphate acyltransferases
GAMIOLLD_01353 1.5e-162 nusG - - K ko:K02601 - ko00000,ko03009,ko03021 Participates in transcription elongation, termination and antitermination
GAMIOLLD_01354 1.66e-42 secE - - U ko:K03073 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
GAMIOLLD_01356 3.24e-291 aspC 2.6.1.1 - E ko:K00812 ko00220,ko00250,ko00270,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko01000,ko01007 DegT/DnrJ/EryC1/StrS aminotransferase family
GAMIOLLD_01357 8.67e-256 proB 2.7.2.11 - E ko:K00931 ko00330,ko00332,ko01100,ko01130,ko01230,map00330,map00332,map01100,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
GAMIOLLD_01358 0.0 obg - - S ko:K03979 - ko00000,ko01000,ko03009 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
GAMIOLLD_01359 4.43e-274 - - - K - - - Psort location Cytoplasmic, score
GAMIOLLD_01360 2.12e-53 rpmA - - J ko:K02899 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal L27 protein
GAMIOLLD_01361 1.44e-62 rplU - - J ko:K02888 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This protein binds to 23S rRNA in the presence of protein L20
GAMIOLLD_01362 0.0 rne 3.1.26.12 - J ko:K08300,ko:K08301 ko03018,map03018 ko00000,ko00001,ko00002,ko01000,ko03009,ko03019 Ribonuclease E/G family
GAMIOLLD_01363 2.21e-14 - - - S - - - Domain of unknown function (DUF4190)
GAMIOLLD_01364 1.41e-304 dapE 3.5.1.18 - E ko:K01439 ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230 ko00000,ko00001,ko00002,ko01000 Peptidase dimerisation domain
GAMIOLLD_01365 9.55e-215 - - - S ko:K07088 - ko00000 Transporter, auxin efflux carrier (AEC) family protein
GAMIOLLD_01366 0.0 - - - V - - - Efflux ABC transporter, permease protein
GAMIOLLD_01367 5.55e-211 lolD - - V ko:K02003 - ko00000,ko00002,ko02000 ATPases associated with a variety of cellular activities
GAMIOLLD_01368 3.3e-75 - - - - - - - -
GAMIOLLD_01369 1.4e-87 - - - - - - - -
GAMIOLLD_01370 0.0 maf - - DF ko:K06287 - ko00000 Maf-like protein
GAMIOLLD_01371 1.3e-237 thrB 2.7.1.39 - E ko:K00872 ko00260,ko01100,ko01110,ko01120,ko01230,map00260,map01100,map01110,map01120,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
GAMIOLLD_01372 6.26e-305 hom 1.1.1.3, 2.7.2.4 - E ko:K00003,ko:K12524 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Homoserine dehydrogenase
GAMIOLLD_01373 0.0 nagE 2.7.1.193 - G ko:K02802,ko:K02803,ko:K02804 ko00520,ko02060,map00520,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 phosphotransferase system, EIIB
GAMIOLLD_01374 5.94e-107 - 2.7.1.208 - G ko:K02777,ko:K20107,ko:K20108 ko00010,ko00500,ko00520,ko02026,ko02060,ko05111,map00010,map00500,map00520,map02026,map02060,map05111 ko00000,ko00001,ko00002,ko01000,ko02000 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
GAMIOLLD_01375 0.0 lysA 4.1.1.20 - E ko:K01586 ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
GAMIOLLD_01376 0.0 argS 6.1.1.19 - J ko:K01887 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Arginyl-tRNA synthetase
GAMIOLLD_01377 1.62e-250 - 3.1.4.46 - C ko:K01126 ko00564,map00564 ko00000,ko00001,ko01000 Glycerophosphoryl diester phosphodiesterase family
GAMIOLLD_01379 2.69e-82 psp1 3.5.99.10 - J ko:K09022 - ko00000,ko01000 Endoribonuclease L-PSP
GAMIOLLD_01380 0.0 gnpA 2.4.1.211 - S ko:K15533 - ko00000,ko01000 Lacto-N-biose phosphorylase C-terminal domain
GAMIOLLD_01382 1.26e-197 - 1.1.1.100, 1.1.1.413 - IQ ko:K00059,ko:K18333,ko:K22322 ko00051,ko00061,ko00333,ko00780,ko01040,ko01100,ko01120,ko01130,ko01212,map00051,map00061,map00333,map00780,map01040,map01100,map01120,map01130,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 KR domain
GAMIOLLD_01383 3.13e-39 - 4.2.1.68 - M ko:K18334 ko00051,ko01120,map00051,map01120 ko00000,ko00001,ko01000 Enolase C-terminal domain-like
GAMIOLLD_01384 6.16e-26 - 4.2.1.68 - M ko:K18334 ko00051,ko01120,map00051,map01120 ko00000,ko00001,ko01000 Enolase C-terminal domain-like
GAMIOLLD_01385 3.26e-23 - 4.2.1.68 - M ko:K18334 ko00051,ko01120,map00051,map01120 ko00000,ko00001,ko01000 carboxylic acid catabolic process
GAMIOLLD_01386 4.87e-236 - - - K ko:K02529 - ko00000,ko03000 Bacterial regulatory proteins, lacI family
GAMIOLLD_01388 1.65e-153 - - - S - - - CYTH
GAMIOLLD_01389 2.52e-214 ybbN - - O ko:K05838 - ko00000,ko03110 Tetratricopeptide repeat
GAMIOLLD_01390 8.35e-232 - - - - - - - -
GAMIOLLD_01391 2.22e-237 - - - - - - - -
GAMIOLLD_01392 3.78e-224 - 5.2.1.8 - M ko:K01802 - ko00000,ko01000 FKBP-type peptidyl-prolyl cis-trans isomerase
GAMIOLLD_01393 1.23e-159 rplA - - J ko:K02863 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
GAMIOLLD_01394 1.43e-95 rplK - - J ko:K02867 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
GAMIOLLD_01395 1.37e-184 - - - - - - - -
GAMIOLLD_01396 1.69e-169 - - - K - - - Bacterial regulatory proteins, tetR family
GAMIOLLD_01397 1.08e-290 - - - G - - - Transmembrane secretion effector
GAMIOLLD_01398 0.0 murA 2.5.1.7 - M ko:K00790 ko00520,ko00550,ko01100,map00520,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
GAMIOLLD_01399 3.04e-280 pyr 1.3.98.1 - F ko:K00226 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Dihydroorotate dehydrogenase
GAMIOLLD_01400 5.2e-253 - - - S ko:K07052 - ko00000 CAAX protease self-immunity
GAMIOLLD_01402 0.0 - - - KL - - - Psort location Cytoplasmic, score 8.87
GAMIOLLD_01403 3.31e-171 leuD 4.2.1.33, 4.2.1.35 - E ko:K01704 ko00290,ko00660,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map01100,map01110,map01210,map01230 br01601,ko00000,ko00001,ko00002,ko01000 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
GAMIOLLD_01404 0.0 leuC 4.2.1.33, 4.2.1.35 - E ko:K01703 ko00290,ko00660,ko00966,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map00966,map01100,map01110,map01210,map01230 br01601,ko00000,ko00001,ko00002,ko01000 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
GAMIOLLD_01405 6.48e-179 ltbR - - K - - - Transcriptional regulator, IclR family, C-terminal domain protein
GAMIOLLD_01406 9.69e-317 - - - S - - - Calcineurin-like phosphoesterase
GAMIOLLD_01409 2.45e-127 - - - S ko:K07133 - ko00000 Domain of unknown function (DUF4143)
GAMIOLLD_01410 0.0 gltX 6.1.1.17 - J ko:K01885 ko00860,ko00970,ko01100,ko01110,ko01120,map00860,map00970,map01100,map01110,map01120 ko00000,ko00001,ko00002,ko01000,ko01007,ko02048,ko03016 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
GAMIOLLD_01412 1.65e-159 - - - S - - - HAD hydrolase, family IA, variant 3
GAMIOLLD_01413 4.15e-257 - - - P - - - NMT1/THI5 like
GAMIOLLD_01414 4.99e-179 - - - P - - - Binding-protein-dependent transport system inner membrane component
GAMIOLLD_01415 3.97e-192 - - - - - - - -
GAMIOLLD_01416 9.49e-163 - - - G - - - Phosphoglycerate mutase family
GAMIOLLD_01417 0.0 - - - EGP - - - Major Facilitator Superfamily
GAMIOLLD_01418 6.15e-127 - - - S - - - GtrA-like protein
GAMIOLLD_01419 9.48e-83 - - - S - - - Macrophage migration inhibitory factor (MIF)
GAMIOLLD_01420 0.0 fhs 6.3.4.3 - F ko:K01938 ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Formate-tetrahydrofolate ligase
GAMIOLLD_01421 0.0 pepD - - E ko:K08659 - ko00000,ko01000,ko01002 Peptidase family C69
GAMIOLLD_01422 4.65e-139 - - - S ko:K06910 - ko00000 Phosphatidylethanolamine-binding protein
GAMIOLLD_01423 0.0 - 3.2.1.51 GH95 G ko:K15923 ko00511,map00511 ko00000,ko00001,ko01000 Glycosyl hydrolase family 65, N-terminal domain
GAMIOLLD_01424 0.0 - - - V ko:K06147 - ko00000,ko02000 ABC transporter transmembrane region
GAMIOLLD_01425 0.0 - - - V ko:K06147 - ko00000,ko02000 ABC transporter, ATP-binding protein
GAMIOLLD_01426 7.47e-123 - - - K - - - helix_turn_helix multiple antibiotic resistance protein
GAMIOLLD_01427 1.81e-243 - - - C - - - Aldo/keto reductase family
GAMIOLLD_01428 4.73e-42 - - - M - - - F5/8 type C domain
GAMIOLLD_01429 2.99e-72 - - - - - - - -
GAMIOLLD_01431 0.0 intA - - L - - - Phage integrase, N-terminal SAM-like domain
GAMIOLLD_01434 3.64e-134 - - - - - - - -
GAMIOLLD_01435 0.0 - - - U - - - Relaxase/Mobilisation nuclease domain
GAMIOLLD_01436 4.68e-78 - - - S - - - Bacterial mobilisation protein (MobC)
GAMIOLLD_01437 0.0 hsdR 3.1.21.3 - V ko:K01153 - ko00000,ko01000,ko02048 Subunit R is required for both nuclease and ATPase activities, but not for modification
GAMIOLLD_01438 2.4e-230 - - - V - - - Abi-like protein
GAMIOLLD_01439 2.3e-293 - 3.1.21.3 - V ko:K01154 - ko00000,ko01000,ko02048 Type I restriction modification DNA specificity domain
GAMIOLLD_01441 0.0 hsdM 2.1.1.72 - V ko:K03427 - ko00000,ko01000,ko02048 modification (methylase) protein of type I restriction-modification system K03427
GAMIOLLD_01442 0.0 - - - - - - - -
GAMIOLLD_01443 2.72e-20 - - - - - - - -
GAMIOLLD_01444 4.12e-142 - - - Q - - - 4'-phosphopantetheinyl transferase superfamily
GAMIOLLD_01445 1.11e-148 - - - K - - - WHG domain
GAMIOLLD_01446 4.75e-47 - - - L ko:K07483 - ko00000 Psort location Cytoplasmic, score 8.87
GAMIOLLD_01447 1.24e-156 - - - L ko:K07483 - ko00000 Integrase core domain
GAMIOLLD_01448 1.57e-54 - - - IQ - - - [acyl-carrier-protein] S-malonyltransferase activity
GAMIOLLD_01449 0.0 - - - EGP - - - Major Facilitator Superfamily
GAMIOLLD_01450 4.12e-184 - - - - - - - -
GAMIOLLD_01451 3.25e-307 - 3.6.4.12 - K ko:K03655 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Putative ATP-dependent DNA helicase recG C-terminal
GAMIOLLD_01452 2.86e-72 - - - L ko:K07454 - ko00000 HNH endonuclease
GAMIOLLD_01453 0.0 bga1 3.2.1.23 - G ko:K12308 ko00052,map00052 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score 8.87
GAMIOLLD_01454 0.0 - - - S - - - Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
GAMIOLLD_01455 1.54e-135 - - - L ko:K07485 - ko00000 Transposase
GAMIOLLD_01456 8.66e-57 - - - O - - - Glutaredoxin
GAMIOLLD_01457 2.18e-203 - - - S ko:K07058 - ko00000 Virulence factor BrkB
GAMIOLLD_01458 8.29e-129 bcp 1.11.1.15 - O ko:K03564 - ko00000,ko01000 Redoxin
GAMIOLLD_01459 9.3e-53 urtE - - E ko:K11963 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter
GAMIOLLD_01460 5.48e-150 upp 2.4.2.9 - F ko:K00761 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko01000 Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
GAMIOLLD_01461 2.21e-109 rlmH 2.1.1.177 - J ko:K00783 - ko00000,ko01000,ko03009 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
GAMIOLLD_01462 0.0 - - - V ko:K02004 - ko00000,ko00002,ko02000 FtsX-like permease family
GAMIOLLD_01463 4.31e-166 - - - V ko:K02003 - ko00000,ko00002,ko02000 ABC transporter
GAMIOLLD_01464 2.46e-132 - - - K - - - Transcriptional regulator C-terminal region
GAMIOLLD_01465 0.0 aroP - - E ko:K03293,ko:K11732 - ko00000,ko02000 aromatic amino acid transport protein AroP K03293
GAMIOLLD_01466 0.0 lacZ 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score 8.87
GAMIOLLD_01467 1.56e-232 - - - S - - - Protein of unknown function (DUF559)
GAMIOLLD_01468 4.15e-259 ilvC 1.1.1.86 - H ko:K00053 ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00770,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
GAMIOLLD_01469 6.15e-261 ilvC 1.1.1.86 - H ko:K00053 ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00770,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
GAMIOLLD_01470 0.0 - - - EGP - - - Sugar (and other) transporter
GAMIOLLD_01471 0.0 scrT - - G - - - Transporter major facilitator family protein
GAMIOLLD_01472 2.12e-97 gtfA 2.4.1.7 GH13 G ko:K00690 ko00500,map00500 ko00000,ko00001,ko01000 Domain of unknown function (DUF1964)
GAMIOLLD_01473 1.43e-249 - - - K ko:K03484 - ko00000,ko03000 helix_turn _helix lactose operon repressor
GAMIOLLD_01474 3.1e-80 crcB - - U ko:K06199 - ko00000,ko02000 Important for reducing fluoride concentration in the cell, thus reducing its toxicity
GAMIOLLD_01475 8.39e-209 crcB - - U ko:K06199 - ko00000,ko02000 Important for reducing fluoride concentration in the cell, thus reducing its toxicity
GAMIOLLD_01476 0.0 purA 6.3.4.4 - F ko:K01939 ko00230,ko00250,ko01100,map00230,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
GAMIOLLD_01477 1.46e-251 fbaA 4.1.2.13 - G ko:K01624 ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Fructose-bisphosphate aldolase class-II
GAMIOLLD_01478 4.12e-313 - 3.2.1.8, 3.5.1.104 - G ko:K01181,ko:K22278 - ko00000,ko01000 Polysaccharide deacetylase
GAMIOLLD_01479 1.42e-74 - - - K - - - Cro/C1-type HTH DNA-binding domain
GAMIOLLD_01481 7.82e-65 - - - E - - - IrrE N-terminal-like domain
GAMIOLLD_01482 5.6e-83 - - - - - - - -
GAMIOLLD_01483 1.78e-79 - - - - - - - -
GAMIOLLD_01485 9.9e-116 XK26_06155 - - K - - - Psort location Cytoplasmic, score
GAMIOLLD_01486 0.0 - - - J ko:K18220 - br01600,ko00000,ko01504 elongation factor G
GAMIOLLD_01487 1.03e-141 - - - - - - - -
GAMIOLLD_01488 1.83e-244 cbs 2.5.1.47, 4.2.1.22 - E ko:K01697,ko:K01738 ko00260,ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00260,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Pyridoxal-phosphate dependent enzyme
GAMIOLLD_01489 1.4e-282 metB 2.5.1.48 - E ko:K01739 ko00270,ko00450,ko00920,ko01100,ko01110,ko01130,ko01230,map00270,map00450,map00920,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Cys/Met metabolism PLP-dependent enzyme
GAMIOLLD_01490 0.0 recQ 3.6.4.12 - L ko:K03654 ko03018,map03018 ko00000,ko00001,ko01000,ko03400 ATP-dependent DNA helicase RecQ
GAMIOLLD_01491 1.27e-118 luxS 4.4.1.21 - H ko:K07173 ko00270,ko01100,ko01230,ko02024,ko02026,ko05111,map00270,map01100,map01230,map02024,map02026,map05111 ko00000,ko00001,ko00002,ko01000 Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
GAMIOLLD_01493 2.63e-121 cysE - - J - - - COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
GAMIOLLD_01494 0.0 aap1 - - E ko:K03294 - ko00000 aromatic amino acid transport protein AroP K03293
GAMIOLLD_01495 0.0 alr 5.1.1.1 - M ko:K01775 ko00473,ko01100,ko01502,map00473,map01100,map01502 ko00000,ko00001,ko01000,ko01011 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
GAMIOLLD_01496 3.14e-313 dgt 3.1.5.1 - F ko:K01129 ko00230,map00230 ko00000,ko00001,ko01000 Phosphohydrolase-associated domain
GAMIOLLD_01497 0.0 dnaG - - L ko:K02316 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
GAMIOLLD_01498 4.53e-205 - - - K - - - Helix-turn-helix domain, rpiR family
GAMIOLLD_01499 8.56e-289 - 3.6.4.12 - K ko:K03655 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Putative ATP-dependent DNA helicase recG C-terminal
GAMIOLLD_01500 2.12e-59 - - - S ko:K06990 - ko00000,ko04812 Memo-like protein
GAMIOLLD_01502 0.0 dxs 2.2.1.7 - H ko:K01662 ko00730,ko00900,ko01100,ko01110,ko01130,map00730,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
GAMIOLLD_01503 2.49e-229 yogA - - C - - - Zinc-binding dehydrogenase
GAMIOLLD_01504 5.14e-111 purE 5.4.99.18 - F ko:K01588 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
GAMIOLLD_01505 5.14e-291 purK 6.3.4.18 - F ko:K01589 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
GAMIOLLD_01506 4.79e-95 fur - - P ko:K03711 - ko00000,ko03000 Belongs to the Fur family
GAMIOLLD_01507 3.79e-61 - - - - - - - -
GAMIOLLD_01508 3.72e-197 - - - S - - - TIGRFAM TIGR03943 family protein
GAMIOLLD_01509 1.76e-258 - - - S ko:K07089 - ko00000 Predicted permease
GAMIOLLD_01510 6.34e-33 - - - J ko:K02911 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011,ko03029 Ribosomal L32p protein family
GAMIOLLD_01511 3.05e-21 rpmJ - - J ko:K02919 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal protein L36
GAMIOLLD_01512 7.57e-57 rpmE2 - - J ko:K02909 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal protein L31
GAMIOLLD_01513 4.85e-65 rpsN - - J ko:K02954 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
GAMIOLLD_01514 6.47e-64 rpmB - - J ko:K02902 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal L28 family
GAMIOLLD_01515 2.69e-180 - - - S - - - cobalamin synthesis protein
GAMIOLLD_01516 1.85e-210 - - - P ko:K02077 - ko00000,ko00002,ko02000 Zinc-uptake complex component A periplasmic
GAMIOLLD_01518 0.0 lysX - - S - - - Uncharacterised conserved protein (DUF2156)
GAMIOLLD_01519 0.0 - - - S - - - Putative esterase
GAMIOLLD_01520 0.0 - - - M - - - Psort location CytoplasmicMembrane, score 9.26
GAMIOLLD_01521 3.09e-306 purD 6.3.3.1, 6.3.4.13 - F ko:K01945,ko:K11788 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Belongs to the GARS family
GAMIOLLD_01522 1.21e-244 purM 6.3.3.1 - F ko:K01933 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Phosphoribosylformylglycinamidine cyclo-ligase
GAMIOLLD_01523 0.0 purF 2.4.2.14 - F ko:K00764 ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000,ko01002 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
GAMIOLLD_01524 0.0 - - - L ko:K03502 - ko00000,ko03400 DNA-damage repair protein (DNA polymerase IV) K00961
GAMIOLLD_01525 9.82e-45 - - - - - - - -
GAMIOLLD_01526 4.02e-91 gloA - - E - - - Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
GAMIOLLD_01527 4.51e-44 - - - K - - - DNA-binding transcription factor activity
GAMIOLLD_01528 2.92e-193 nnrE - - L - - - Uracil DNA glycosylase superfamily
GAMIOLLD_01529 5.79e-136 - - - S - - - Protein of unknown function (DUF4230)
GAMIOLLD_01530 2.72e-141 - - - - - - - -
GAMIOLLD_01531 0.0 purL 6.3.5.3 - F ko:K01952 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 CobB/CobQ-like glutamine amidotransferase domain
GAMIOLLD_01532 2.05e-177 purC 6.3.2.6 - F ko:K01923 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Belongs to the SAICAR synthetase family
GAMIOLLD_01533 4.7e-299 purT 2.1.2.2 - F ko:K08289 ko00230,ko00670,ko01100,ko01110,ko01130,map00230,map00670,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
GAMIOLLD_01534 0.0 - - - M - - - Parallel beta-helix repeats
GAMIOLLD_01535 1.04e-289 - - - M - - - Glycosyl transferase 4-like domain
GAMIOLLD_01536 1.33e-255 ltaE 4.1.2.48 - E ko:K01620 ko00260,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko01000 Beta-eliminating lyase
GAMIOLLD_01538 5.77e-81 rpsL - - J ko:K02950 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
GAMIOLLD_01539 9.4e-105 rpsG - - J ko:K02992 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
GAMIOLLD_01540 0.0 fusA - - J ko:K02355 - ko00000,ko03012,ko03029 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
GAMIOLLD_01541 5.83e-293 tuf - - J ko:K02358 - ko00000,ko03012,ko03029,ko04147 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
GAMIOLLD_01542 0.0 - - - S - - - Esterase-like activity of phytase
GAMIOLLD_01543 1.24e-253 - - - EGP - - - Transmembrane secretion effector
GAMIOLLD_01545 3.8e-135 efp - - J ko:K02356 - ko00000,ko03012 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
GAMIOLLD_01546 1.48e-143 nusB - - K ko:K03625 - ko00000,ko03009,ko03021 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
GAMIOLLD_01547 1.4e-303 carA 6.3.5.5 - F ko:K01956 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the CarA family
GAMIOLLD_01548 0.0 carB 6.3.5.5 - EF ko:K01955 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Carbamoyl-phosphate synthetase large chain, oligomerisation domain
GAMIOLLD_01549 0.0 pyrF 4.1.1.23 - F ko:K01591 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Essential for recycling GMP and indirectly, cGMP
GAMIOLLD_01550 0.0 - - - S - - - Protein of unknown function DUF262
GAMIOLLD_01551 6.09e-152 - - - K - - - helix_turn_helix, Lux Regulon
GAMIOLLD_01552 0.0 - - - T - - - Histidine kinase
GAMIOLLD_01553 2.17e-151 - - - S - - - Domain of unknown function (DUF5067)
GAMIOLLD_01554 8.71e-176 - - - S ko:K06890 - ko00000 Belongs to the BI1 family
GAMIOLLD_01555 1.59e-216 - - - EG - - - EamA-like transporter family
GAMIOLLD_01556 1.42e-156 ywaC 2.7.6.5 - S ko:K07816 ko00230,map00230 ko00000,ko00001,ko01000 Region found in RelA / SpoT proteins
GAMIOLLD_01557 0.0 miaB 2.8.4.3 - H ko:K06168 - ko00000,ko01000,ko03016 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
GAMIOLLD_01558 5.98e-234 miaA 2.5.1.75 - F ko:K00791 ko00908,ko01100,ko01110,map00908,map01100,map01110 ko00000,ko00001,ko01000,ko01006,ko03016 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
GAMIOLLD_01559 1.22e-174 fic - - D ko:K04095 - ko00000,ko03036 Fic/DOC family
GAMIOLLD_01560 0.0 ftsK - - D ko:K03466 - ko00000,ko03036 FtsK SpoIIIE family protein
GAMIOLLD_01561 9.72e-157 pgsA 2.7.8.41, 2.7.8.5 - I ko:K00995,ko:K08744 ko00564,ko01100,map00564,map01100 ko00000,ko00001,ko01000 Belongs to the CDP-alcohol phosphatidyltransferase class-I family
GAMIOLLD_01562 1.14e-124 cinA 3.5.1.42 - S ko:K03743 ko00760,map00760 ko00000,ko00001,ko01000 Belongs to the CinA family
GAMIOLLD_01563 1.03e-105 - - - K - - - Helix-turn-helix XRE-family like proteins
GAMIOLLD_01564 3.38e-54 - - - S - - - Protein of unknown function (DUF3046)
GAMIOLLD_01565 7.71e-276 recA - - L ko:K03553 ko03440,map03440 ko00000,ko00001,ko00002,ko03400 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
GAMIOLLD_01566 1.2e-113 recX - - S ko:K03565 - ko00000,ko03400 Modulates RecA activity
GAMIOLLD_01569 3.68e-152 hpf - - J ko:K05808 - ko00000,ko03009 Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
GAMIOLLD_01570 0.0 secA - - U ko:K03070 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
GAMIOLLD_01571 1.86e-245 trpD 2.4.2.18 - F ko:K00766 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
GAMIOLLD_01572 2.64e-141 - - - - - - - -
GAMIOLLD_01573 3.55e-172 plsC2 2.3.1.51 - I ko:K00655 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko01004 Phosphate acyltransferases
GAMIOLLD_01574 0.0 pknL 2.7.11.1 - KLT ko:K08884,ko:K12132 - ko00000,ko01000,ko01001 PASTA
GAMIOLLD_01575 6.37e-257 idsA 2.5.1.1, 2.5.1.10, 2.5.1.29 - H ko:K13787 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000,ko01006 Belongs to the FPP GGPP synthase family
GAMIOLLD_01576 3.42e-158 - - - - - - - -
GAMIOLLD_01577 3.09e-252 sigA - - K ko:K03086 - ko00000,ko03021 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
GAMIOLLD_01578 0.0 gyrB2 5.99.1.3 - L ko:K02470 - ko00000,ko01000,ko03032,ko03400 DNA topoisomerase (ATP-hydrolyzing)
GAMIOLLD_01579 0.0 aspA 4.3.1.1 - E ko:K01744 ko00250,ko01100,map00250,map01100 ko00000,ko00001,ko01000 Fumarase C C-terminus
GAMIOLLD_01580 1.12e-49 - - - K ko:K07727 - ko00000,ko03000 Transcriptional regulator
GAMIOLLD_01581 0.0 lhr - - L ko:K03724 - ko00000,ko01000,ko03400 DEAD DEAH box helicase
GAMIOLLD_01582 0.0 gyrA2 5.99.1.3 - L ko:K02469 - ko00000,ko01000,ko03032,ko03400 DNA topoisomerase (ATP-hydrolyzing)
GAMIOLLD_01583 2.82e-301 - - - S - - - Type I phosphodiesterase / nucleotide pyrophosphatase
GAMIOLLD_01584 1.16e-241 - - - S - - - Protein of unknown function (DUF3071)
GAMIOLLD_01585 2.45e-63 - - - S - - - Domain of unknown function (DUF4193)
GAMIOLLD_01586 1.42e-110 dut 3.6.1.23 - F ko:K01520 ko00240,ko00983,ko01100,map00240,map00983,map01100 ko00000,ko00001,ko00002,ko01000,ko03400 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA
GAMIOLLD_01587 0.0 relA 2.7.6.5, 3.1.7.2 - KT ko:K00951,ko:K01139 ko00230,map00230 ko00000,ko00001,ko01000,ko03009 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
GAMIOLLD_01589 2.27e-296 intA - - L - - - Phage integrase family
GAMIOLLD_01590 6.11e-179 fic - - D ko:K04095 - ko00000,ko03036 Fic/DOC family
GAMIOLLD_01591 1.3e-36 - - - - - - - -
GAMIOLLD_01592 2.27e-36 - - - L - - - DNA integration
GAMIOLLD_01594 9.63e-93 - - - S - - - EcsC protein family
GAMIOLLD_01595 1.75e-285 hsdM 2.1.1.72, 3.1.21.3 - V ko:K01153,ko:K01154,ko:K03427 - ko00000,ko01000,ko02048 type I restriction modification DNA specificity domain
GAMIOLLD_01596 5.58e-257 - - - S - - - HipA-like C-terminal domain
GAMIOLLD_01597 2.5e-45 - - - - - - - -
GAMIOLLD_01598 2.96e-265 - - - E - - - Belongs to the peptidase S1B family
GAMIOLLD_01599 8.11e-52 - - - T - - - Toxic component of a toxin-antitoxin (TA) module
GAMIOLLD_01600 9.55e-66 - - - L ko:K07473 - ko00000,ko02048 RelB antitoxin
GAMIOLLD_01601 3.42e-134 ppiA 5.2.1.8 - G ko:K03767,ko:K03768 ko01503,ko04217,map01503,map04217 ko00000,ko00001,ko01000,ko03110,ko04147 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
GAMIOLLD_01602 2.76e-212 - - - S - - - Sucrose-6F-phosphate phosphohydrolase
GAMIOLLD_01603 1.49e-121 - - - P - - - ABC-type metal ion transport system permease component
GAMIOLLD_01604 6.96e-286 - - - S - - - Peptidase dimerisation domain
GAMIOLLD_01605 0.0 nadE 6.3.5.1 - H ko:K01950 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
GAMIOLLD_01606 5.11e-47 - - - - - - - -
GAMIOLLD_01607 0.0 pflB 2.3.1.54 - C ko:K00656 ko00620,ko00640,ko00650,ko01100,ko01120,map00620,map00640,map00650,map01100,map01120 ko00000,ko00001,ko01000 Pyruvate formate lyase-like
GAMIOLLD_01608 5.19e-222 pflA 1.97.1.4 - C ko:K04069 - ko00000,ko01000 Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
GAMIOLLD_01609 1.26e-145 - - - S - - - Protein of unknown function (DUF3000)
GAMIOLLD_01610 0.0 rnd 3.1.13.5 - J ko:K03684 - ko00000,ko01000,ko03016 3'-5' exonuclease
GAMIOLLD_01611 9.36e-310 tig - - D ko:K03545 - ko00000 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
GAMIOLLD_01612 0.0 - - - P ko:K03281 - ko00000 Voltage gated chloride channel
GAMIOLLD_01613 4.87e-183 cobB2 - - K ko:K12410 - ko00000,ko01000 Sir2 family
GAMIOLLD_01614 5.39e-296 ilvA 4.3.1.19 - E ko:K01754 ko00260,ko00290,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00290,map01100,map01110,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Pyridoxal-phosphate dependent enzyme
GAMIOLLD_01615 1.12e-109 tadA 3.5.4.1, 3.5.4.33 - FJ ko:K01485,ko:K11991 ko00240,ko00330,ko01100,map00240,map00330,map01100 ko00000,ko00001,ko01000,ko03016 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
GAMIOLLD_01616 3.99e-186 - - - S ko:K06999 - ko00000 Phospholipase/Carboxylesterase
GAMIOLLD_01617 0.0 nhaP - - P ko:K03316 - ko00000 Sodium/hydrogen exchanger family
GAMIOLLD_01618 6.04e-144 dcd 3.5.4.13 - F ko:K01494 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the dCTP deaminase family
GAMIOLLD_01619 0.0 - 3.2.1.22 - G ko:K07407 ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603 ko00000,ko00001,ko01000 Glycosyl hydrolase family 36 N-terminal domain
GAMIOLLD_01620 0.0 pacL2 3.6.3.8 - P ko:K01537 - ko00000,ko01000 Cation transporter/ATPase, N-terminus
GAMIOLLD_01622 2.98e-221 rlmB 2.1.1.185 - J ko:K03218 - ko00000,ko01000,ko03009 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
GAMIOLLD_01623 0.0 - - - KLT - - - Domain of unknown function (DUF4032)
GAMIOLLD_01624 1.57e-199 - - - - - - - -
GAMIOLLD_01625 4.29e-229 - 3.4.22.70 - M ko:K07284 - ko00000,ko01000,ko01002,ko01011 Sortase family
GAMIOLLD_01626 3.67e-309 - - - M - - - LPXTG-motif cell wall anchor domain protein
GAMIOLLD_01627 0.0 - - - S - - - LPXTG-motif cell wall anchor domain protein
GAMIOLLD_01628 4.46e-132 - - - L - - - Helix-turn-helix domain
GAMIOLLD_01629 2.18e-269 ugpC - - E ko:K10112 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Belongs to the ABC transporter superfamily
GAMIOLLD_01630 6.55e-222 - - - K - - - Psort location Cytoplasmic, score
GAMIOLLD_01631 0.0 - - - KLT - - - Protein tyrosine kinase
GAMIOLLD_01632 8.64e-200 - - - O - - - Thioredoxin
GAMIOLLD_01634 1.15e-281 rpfB - - S ko:K21688 - ko00000 G5
GAMIOLLD_01635 8.92e-218 ksgA 2.1.1.182 - J ko:K02528 - ko00000,ko01000,ko03009 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
GAMIOLLD_01636 1.54e-212 ispE 2.7.1.148 - F ko:K00919 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
GAMIOLLD_01637 8.11e-145 - - - S - - - LytR cell envelope-related transcriptional attenuator
GAMIOLLD_01638 0.0 pcnA 2.7.7.19, 2.7.7.72 - J ko:K00970,ko:K00974 ko03013,ko03018,map03013,map03018 ko00000,ko00001,ko01000,ko03016,ko03019 Probable RNA and SrmB- binding site of polymerase A
GAMIOLLD_01639 3.18e-160 mutT4 - - L - - - Belongs to the Nudix hydrolase family
GAMIOLLD_01640 0.0 - - - M - - - Conserved repeat domain
GAMIOLLD_01641 0.0 mviN - - KLT ko:K03980 - ko00000,ko01011,ko02000 MviN-like protein
GAMIOLLD_01642 3.23e-257 trxB 1.8.1.9 - C ko:K00384 ko00450,map00450 ko00000,ko00001,ko01000 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
GAMIOLLD_01643 2.81e-312 parB - - K ko:K03497 - ko00000,ko03000,ko03036,ko04812 Belongs to the ParB family
GAMIOLLD_01644 1.01e-227 parA - - D ko:K03496 - ko00000,ko03036,ko04812 CobQ CobB MinD ParA nucleotide binding domain protein
GAMIOLLD_01645 2.59e-162 rsmG 2.1.1.170 - J ko:K03501 - ko00000,ko01000,ko03009,ko03036 Specifically methylates the N7 position of a guanine in 16S rRNA
GAMIOLLD_01646 4.15e-120 jag - - S ko:K06346 - ko00000 Putative single-stranded nucleic acids-binding domain
GAMIOLLD_01647 2.11e-227 yidC - - U ko:K03217 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044,ko03029 Membrane protein insertase, YidC Oxa1 family
GAMIOLLD_01648 3.88e-20 rpmH - - J ko:K02914 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL34 family
GAMIOLLD_01649 0.0 dnaA - - L ko:K02313 ko02020,ko04112,map02020,map04112 ko00000,ko00001,ko03032,ko03036 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
GAMIOLLD_01650 1.15e-259 dnaN 2.7.7.7 - L ko:K02338 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
GAMIOLLD_01651 1.04e-303 recF - - L ko:K03629 ko03440,map03440 ko00000,ko00001,ko03400 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
GAMIOLLD_01652 3.59e-121 - - - S - - - Protein of unknown function (DUF721)
GAMIOLLD_01653 0.0 gyrB 5.99.1.3 - L ko:K02470 - ko00000,ko01000,ko03032,ko03400 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
GAMIOLLD_01654 0.0 gyrA 5.99.1.3 - L ko:K02469 - ko00000,ko01000,ko03032,ko03400 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
GAMIOLLD_01655 4.11e-104 - - - S - - - Transmembrane domain of unknown function (DUF3566)
GAMIOLLD_01657 2.51e-239 - - - G - - - Glycosyl hydrolases family 43
GAMIOLLD_01658 2.29e-240 - - - K - - - Periplasmic binding protein domain
GAMIOLLD_01659 3.08e-289 - - - I - - - Serine aminopeptidase, S33
GAMIOLLD_01660 7.69e-11 - - - K ko:K02529 - ko00000,ko03000 helix_turn _helix lactose operon repressor
GAMIOLLD_01661 2.87e-56 - - - S - - - Protein of unknown function (DUF2442)
GAMIOLLD_01662 7.12e-146 - - - L - - - Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
GAMIOLLD_01663 0.0 - 2.1.1.72 - L ko:K07317 - ko00000,ko01000,ko02048 Eco57I restriction-modification methylase
GAMIOLLD_01664 4.14e-230 - 3.1.21.4 - L ko:K01155 - ko00000,ko01000,ko02048 BsuBI/PstI restriction endonuclease C-terminus
GAMIOLLD_01665 1.37e-286 - - - - - - - -
GAMIOLLD_01667 3.04e-231 - - - L - - - Phage integrase family
GAMIOLLD_01669 0.0 gdhA 1.4.1.4 - E ko:K00262 ko00220,ko00250,ko00910,ko01100,map00220,map00250,map00910,map01100 ko00000,ko00001,ko01000 Belongs to the Glu Leu Phe Val dehydrogenases family
GAMIOLLD_01670 4.98e-159 gntR - - K - - - FCD
GAMIOLLD_01671 9.15e-79 mscL - - M ko:K03282 - ko00000,ko02000 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
GAMIOLLD_01672 0.0 - 3.2.1.55 GH51 G ko:K01209 ko00520,map00520 ko00000,ko00001,ko01000 arabinose metabolic process
GAMIOLLD_01675 0.0 - - - G - - - Glycosyl hydrolase family 20, domain 2
GAMIOLLD_01676 2e-241 - - - K ko:K02529 - ko00000,ko03000 helix_turn _helix lactose operon repressor
GAMIOLLD_01677 1.47e-100 ulaC 2.7.1.194 - G ko:K02821 ko00053,ko01100,ko01120,ko02060,map00053,map01100,map01120,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
GAMIOLLD_01678 1.49e-54 - 2.7.1.194 - G ko:K02822 ko00053,ko01100,ko01120,ko02060,map00053,map01100,map01120,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system, Lactose/Cellobiose specific IIB subunit
GAMIOLLD_01679 0.0 ulaA - - S ko:K03475 ko00053,ko01100,ko01120,ko02060,map00053,map01100,map01120,map02060 ko00000,ko00001,ko00002,ko02000 PTS system sugar-specific permease component
GAMIOLLD_01680 9.89e-174 - - - S ko:K07043 - ko00000 Protein of unknown function DUF45
GAMIOLLD_01681 2.68e-110 dps - - P ko:K04047 - ko00000,ko03036 Belongs to the Dps family
GAMIOLLD_01682 4.89e-241 - - - EG - - - EamA-like transporter family
GAMIOLLD_01683 3.36e-306 - - - P ko:K03699 - ko00000,ko02042 Transporter associated domain
GAMIOLLD_01684 2.3e-122 - - - K ko:K02529 - ko00000,ko03000 helix_turn _helix lactose operon repressor
GAMIOLLD_01685 6.08e-154 cah 4.2.1.1 - P ko:K01673 ko00910,map00910 ko00000,ko00001,ko01000 Reversible hydration of carbon dioxide
GAMIOLLD_01686 1.01e-137 ahpC 1.11.1.15 - O ko:K03386 ko04214,map04214 ko00000,ko00001,ko01000,ko04147 C-terminal domain of 1-Cys peroxiredoxin
GAMIOLLD_01687 0.0 - 1.8.1.9 - C ko:K00384 ko00450,map00450 ko00000,ko00001,ko01000 Thioredoxin domain
GAMIOLLD_01688 0.0 - 3.6.4.12 - K ko:K03655 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Putative ATP-dependent DNA helicase recG C-terminal
GAMIOLLD_01689 9.66e-309 - - - EGP ko:K08177 - ko00000,ko02000 Major Facilitator Superfamily
GAMIOLLD_01690 0.0 ppc 4.1.1.31 - H ko:K01595 ko00620,ko00680,ko00710,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00710,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
GAMIOLLD_01691 0.0 - - - S - - - Threonine/Serine exporter, ThrE
GAMIOLLD_01692 1.26e-226 - - - S - - - Amidohydrolase family
GAMIOLLD_01693 8.25e-249 - - - S - - - Protein conserved in bacteria
GAMIOLLD_01694 1.2e-261 trpS 6.1.1.2 - J ko:K01867 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the class-I aminoacyl-tRNA synthetase family
GAMIOLLD_01695 5.42e-67 - - - S - - - Protein of unknown function (DUF3073)
GAMIOLLD_01696 2.26e-143 - - - T - - - protein histidine kinase activity
GAMIOLLD_01697 5.04e-260 rfbB 4.2.1.46 - M ko:K01710 ko00521,ko00523,ko00525,ko01055,ko01130,map00521,map00523,map00525,map01055,map01130 ko00000,ko00001,ko00002,ko01000 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
GAMIOLLD_01698 4.72e-38 - - - I - - - transferase activity, transferring acyl groups other than amino-acyl groups
GAMIOLLD_01699 0.0 - - - M - - - Glycosyl hydrolases family 25
GAMIOLLD_01700 1.13e-218 - - - M - - - Glycosyl transferase family 2
GAMIOLLD_01701 0.0 - - - - - - - -
GAMIOLLD_01702 3.83e-259 rfbB 4.2.1.46 - M ko:K01710 ko00521,ko00523,ko00525,ko01055,ko01130,map00521,map00523,map00525,map01055,map01130 ko00000,ko00001,ko00002,ko01000 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
GAMIOLLD_01703 0.0 - 3.6.4.12 - K ko:K03655 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Putative DNA-binding domain
GAMIOLLD_01704 0.0 rfbD 1.1.1.133, 5.1.3.13 - M ko:K00067,ko:K01790 ko00521,ko00523,ko01130,map00521,map00523,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
GAMIOLLD_01705 2.21e-49 - - - L - - - Transposase DDE domain
GAMIOLLD_01706 1.07e-29 - - - L ko:K07483 - ko00000 Transposase
GAMIOLLD_01707 3.21e-241 - - - L - - - HTH-like domain
GAMIOLLD_01708 8.94e-198 - - - L - - - Transposase, Mutator family
GAMIOLLD_01709 4.05e-147 clpP1 3.4.21.92 - O ko:K01358 ko04112,ko04212,map04112,map04212 ko00000,ko00001,ko01000,ko01002 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
GAMIOLLD_01710 6.56e-164 clpP 3.4.21.92 - O ko:K01358 ko04112,ko04212,map04112,map04212 ko00000,ko00001,ko01000,ko01002 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
GAMIOLLD_01711 5.01e-311 clpX - - O ko:K03544 ko04112,map04112 ko00000,ko00001,ko03110 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
GAMIOLLD_01714 9e-299 patB 4.4.1.8 - E ko:K14155 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 ko00000,ko00001,ko01000,ko01007 Aminotransferase, class I II
GAMIOLLD_01715 8.28e-291 nhaA - - P ko:K03313 - ko00000,ko02000 Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
GAMIOLLD_01716 4.26e-222 fmt2 3.2.2.10 - S ko:K06966 ko00230,ko00240,map00230,map00240 ko00000,ko00001,ko01000 Belongs to the LOG family
GAMIOLLD_01717 3.52e-151 safC - - S - - - O-methyltransferase
GAMIOLLD_01718 7.2e-235 sdhB 1.3.5.1, 1.3.5.4 - C ko:K00240 ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 4Fe-4S dicluster domain
GAMIOLLD_01719 2.23e-93 yraN - - L ko:K07460 - ko00000 Belongs to the UPF0102 family
GAMIOLLD_01720 0.0 comM - - O ko:K07391 - ko00000 Magnesium chelatase, subunit ChlI C-terminal
GAMIOLLD_01721 0.0 dprA - - LU ko:K04096 - ko00000 DNA recombination-mediator protein A
GAMIOLLD_01722 0.0 sdhA 1.3.5.1, 1.3.5.4, 1.4.3.16 - C ko:K00239,ko:K00278 ko00020,ko00190,ko00250,ko00650,ko00720,ko00760,ko01100,ko01110,ko01120,ko01130,ko01200,ko05134,map00020,map00190,map00250,map00650,map00720,map00760,map01100,map01110,map01120,map01130,map01200,map05134 ko00000,ko00001,ko00002,ko01000 Succinate dehydrogenase flavoprotein subunit
GAMIOLLD_01723 3.62e-212 pdxY 2.7.1.35 - H ko:K00868 ko00750,ko01100,map00750,map01100 ko00000,ko00001,ko01000 Phosphomethylpyrimidine kinase
GAMIOLLD_01724 9.86e-202 - - - S - - - Putative ABC-transporter type IV
GAMIOLLD_01725 0.0 - 2.5.1.49 - E ko:K01740 ko00270,ko01100,map00270,map01100 ko00000,ko00001,ko01000 Aminotransferase class-V
GAMIOLLD_01726 1.78e-214 - - - V ko:K02003 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
GAMIOLLD_01727 0.0 - - - MV ko:K02004 - ko00000,ko00002,ko02000 MacB-like periplasmic core domain
GAMIOLLD_01728 0.0 - - - I - - - PAP2 superfamily
GAMIOLLD_01729 2.92e-171 - - - K - - - helix_turn_helix, Lux Regulon
GAMIOLLD_01730 0.0 - - - T - - - Histidine kinase
GAMIOLLD_01731 0.0 pip 3.4.11.5 - S ko:K01259 ko00330,map00330 ko00000,ko00001,ko01000,ko01002 alpha/beta hydrolase fold
GAMIOLLD_01732 2.58e-184 proC 1.5.1.2 - E ko:K00286 ko00330,ko01100,ko01110,ko01130,ko01230,map00330,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
GAMIOLLD_01733 2.08e-213 iaaA 3.4.19.5 - E ko:K13051 - ko00000,ko01000,ko01002 Asparaginase
GAMIOLLD_01734 1.1e-188 - - - P ko:K02073 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 NLPA lipoprotein
GAMIOLLD_01735 2.43e-240 acoA 1.2.4.1 - C ko:K00161,ko:K21416 ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04922,ko05230,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200,map04066,map04922,map05230 br01601,ko00000,ko00001,ko00002,ko01000 Dehydrogenase E1 component
GAMIOLLD_01736 1.63e-237 acoB 1.2.4.1, 1.2.4.4 - C ko:K00162,ko:K11381,ko:K21417 ko00010,ko00020,ko00280,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04922,ko05230,map00010,map00020,map00280,map00620,map00640,map01100,map01110,map01120,map01130,map01200,map04066,map04922,map05230 br01601,ko00000,ko00001,ko00002,ko01000 Pyruvate 2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component eukaryotic type beta subunit
GAMIOLLD_01737 8.13e-263 metN - - P ko:K02071 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
GAMIOLLD_01738 9.77e-123 - - - P ko:K02072 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
GAMIOLLD_01739 1.73e-290 - 2.6.1.1, 2.6.1.2, 2.6.1.66, 2.6.1.83 - E ko:K00812,ko:K08969,ko:K10206,ko:K10907,ko:K14260,ko:K14261 ko00220,ko00250,ko00270,ko00290,ko00300,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00290,map00300,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Aminotransferase class I and II
GAMIOLLD_01740 4.5e-257 ychF - - J ko:K06942 - ko00000,ko03009 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
GAMIOLLD_01741 4.77e-247 - - - L - - - Phage integrase, N-terminal SAM-like domain
GAMIOLLD_01743 1.9e-39 - - - - - - - -
GAMIOLLD_01744 1.27e-10 - - - L - - - Phage integrase, N-terminal SAM-like domain
GAMIOLLD_01745 9.07e-151 - - - LU ko:K04096 - ko00000 DNA recombination-mediator protein A
GAMIOLLD_01746 5.77e-76 - - - S - - - competence protein
GAMIOLLD_01747 8.1e-11 - - - - - - - -
GAMIOLLD_01751 2.45e-61 - - - - - - - -
GAMIOLLD_01752 8.76e-180 nfrA - - C - - - Nitroreductase family
GAMIOLLD_01753 1.02e-88 - - - S - - - Protein of unknown function (DUF4235)
GAMIOLLD_01754 1.02e-171 gpm2 3.1.3.73 - G ko:K02226 ko00860,ko01100,map00860,map01100 ko00000,ko00001,ko00002,ko01000 Phosphoglycerate mutase family
GAMIOLLD_01757 3.34e-244 - - - K - - - Psort location Cytoplasmic, score
GAMIOLLD_01758 0.0 strK 3.1.3.1, 3.1.3.39 - P ko:K01077,ko:K04342 ko00521,ko00730,ko00790,ko01100,ko01130,ko02020,map00521,map00730,map00790,map01100,map01130,map02020 ko00000,ko00001,ko00002,ko00537,ko01000,ko04147 Alkaline phosphatase homologues
GAMIOLLD_01759 0.0 dnaK - - O ko:K04043 ko03018,ko04212,ko05152,map03018,map04212,map05152 ko00000,ko00001,ko03019,ko03029,ko03110,ko04147 Heat shock 70 kDa protein
GAMIOLLD_01760 3.29e-80 grpE - - O ko:K03687 - ko00000,ko03029,ko03110 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
GAMIOLLD_01761 2.72e-236 dnaJ - - O ko:K03686,ko:K05516 - ko00000,ko03029,ko03036,ko03110 DnaJ molecular chaperone homology domain
GAMIOLLD_01762 9.12e-112 hspR - - K ko:K13640 - ko00000,ko03000 transcriptional regulator, MerR family
GAMIOLLD_01763 0.0 - 3.2.1.18 GH33 G ko:K01186 ko00511,ko00600,ko04142,map00511,map00600,map04142 ko00000,ko00001,ko01000,ko02042 BNR repeat-like domain
GAMIOLLD_01764 0.0 - 3.2.1.18 GH33 G ko:K01186 ko00511,ko00600,ko04142,map00511,map00600,map04142 ko00000,ko00001,ko01000,ko02042 BNR Asp-box repeat
GAMIOLLD_01765 1.42e-172 - - - S - - - HAD hydrolase, family IA, variant 3
GAMIOLLD_01767 2.18e-162 dedA1 - - S ko:K03975 - ko00000 SNARE associated Golgi protein
GAMIOLLD_01768 1.87e-221 rsmI 2.1.1.198 - H ko:K07056 - ko00000,ko01000,ko03009 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
GAMIOLLD_01769 1.6e-83 - - - - - - - -
GAMIOLLD_01770 1.14e-171 - - - - - - - -
GAMIOLLD_01771 0.0 metG 6.1.1.10 - J ko:K01874 ko00450,ko00970,map00450,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
GAMIOLLD_01772 7.84e-113 - - - K - - - Transcriptional regulator
GAMIOLLD_01774 0.0 - - - G ko:K16210 - ko00000,ko02000 MFS/sugar transport protein
GAMIOLLD_01775 5.49e-237 tatD - - L ko:K03424 - ko00000,ko01000 TatD related DNase
GAMIOLLD_01776 0.0 kup - - P ko:K03549 - ko00000,ko02000 Transport of potassium into the cell
GAMIOLLD_01778 1.93e-210 - - - S - - - Glutamine amidotransferase domain
GAMIOLLD_01779 1.17e-175 - - - T ko:K06950 - ko00000 HD domain
GAMIOLLD_01780 1.41e-263 - - - V ko:K02003 - ko00000,ko00002,ko02000 ABC transporter
GAMIOLLD_01781 0.0 - - - V - - - ABC transporter permease
GAMIOLLD_01782 0.0 - - - H - - - Protein of unknown function (DUF4012)
GAMIOLLD_01783 0.0 - - - S - - - Psort location Cytoplasmic, score 8.87
GAMIOLLD_01784 5.53e-211 thiG 2.8.1.10 - H ko:K03149 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko01000 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S
GAMIOLLD_01785 2.81e-36 thiS - - H ko:K03154 ko04122,map04122 ko00000,ko00001 ThiS family
GAMIOLLD_01786 4.67e-97 - - - - - - - -
GAMIOLLD_01787 2.33e-243 - - - - - - - -
GAMIOLLD_01788 1.76e-265 - - - S - - - Glycosyltransferase, group 2 family protein
GAMIOLLD_01789 1.15e-112 - - - Q - - - Acetyltransferase (GNAT) domain
GAMIOLLD_01790 2.52e-198 - - - I - - - Serine aminopeptidase, S33
GAMIOLLD_01791 3.02e-70 - - - S - - - Putative heavy-metal-binding
GAMIOLLD_01792 1.67e-62 - - - - - - - -
GAMIOLLD_01793 1.7e-118 mutT 3.6.1.55 - L ko:K03574 - ko00000,ko01000,ko03400 NUDIX domain
GAMIOLLD_01794 0.0 - - - KL - - - Domain of unknown function (DUF3427)
GAMIOLLD_01796 8.27e-251 msrA 1.8.4.11, 1.8.4.12 - O ko:K07304,ko:K12267 - ko00000,ko01000 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
GAMIOLLD_01798 1.35e-146 - - - - - - - -
GAMIOLLD_01799 2.55e-213 - - - EG - - - EamA-like transporter family
GAMIOLLD_01800 2.42e-263 pldB 3.1.1.5 - I ko:K01048 ko00564,map00564 ko00000,ko00001,ko01000 Serine aminopeptidase, S33
GAMIOLLD_01801 0.0 - - - S ko:K01421 - ko00000 YhgE Pip domain protein
GAMIOLLD_01802 0.0 - - - S ko:K01421 - ko00000 YhgE Pip domain protein
GAMIOLLD_01803 0.0 pepX 3.4.14.5 - E ko:K01278 ko04974,map04974 ko00000,ko00001,ko01000,ko01002,ko04090,ko04147 Dipeptidyl peptidase IV (DPP IV) N-terminal region
GAMIOLLD_01804 3.69e-167 fhaA - - T - - - Protein of unknown function (DUF2662)
GAMIOLLD_01805 1.44e-122 fhaB - - T - - - Inner membrane component of T3SS, cytoplasmic domain
GAMIOLLD_01806 0.0 pstP 3.1.3.16 - T ko:K20074 - ko00000,ko01000,ko01009 Sigma factor PP2C-like phosphatases
GAMIOLLD_01807 0.0 rodA - - D ko:K03588 ko04112,map04112 ko00000,ko00001,ko02000,ko03036 Belongs to the SEDS family
GAMIOLLD_01808 0.0 pbpA - - M ko:K05364 ko00550,map00550 ko00000,ko00001,ko01011 penicillin-binding protein
GAMIOLLD_01809 5.69e-234 pknA 2.7.11.1 - T ko:K08884,ko:K12132 - ko00000,ko01000,ko01001 Protein tyrosine kinase
GAMIOLLD_01810 0.0 pknB 2.7.11.1 - KLT ko:K08884,ko:K12132 - ko00000,ko01000,ko01001 Protein tyrosine kinase
GAMIOLLD_01811 9.5e-156 trpG 2.6.1.85, 4.1.3.27 - EH ko:K01658,ko:K01664 ko00400,ko00405,ko00790,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00400,map00405,map00790,map01100,map01110,map01130,map01230,map02024,map02025 ko00000,ko00001,ko00002,ko01000 para-aminobenzoate synthase glutamine amidotransferase component II
GAMIOLLD_01812 5.65e-296 srtB 3.4.22.70 - M ko:K07284 - ko00000,ko01000,ko01002,ko01011 Sortase family
GAMIOLLD_01813 1.18e-182 - - - S - - - Bacterial protein of unknown function (DUF881)
GAMIOLLD_01814 1.77e-93 crgA - - D - - - Involved in cell division
GAMIOLLD_01815 0.0 - - - L - - - ribosomal rna small subunit methyltransferase
GAMIOLLD_01816 1.47e-155 - - - L - - - HTH-like domain
GAMIOLLD_01817 4.85e-186 gluP 3.4.21.105 - S ko:K19225 - ko00000,ko01000,ko01002 Rhomboid family
GAMIOLLD_01818 7.68e-47 - - - - - - - -
GAMIOLLD_01819 0.0 glgP 2.4.1.1 GT35 G ko:K00688 ko00500,ko01100,ko01110,ko02026,ko04217,ko04910,ko04922,ko04931,map00500,map01100,map01110,map02026,map04217,map04910,map04922,map04931 ko00000,ko00001,ko01000 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
GAMIOLLD_01820 5.53e-96 - - - I - - - Sterol carrier protein
GAMIOLLD_01821 2.19e-60 - - - L ko:K07485 - ko00000 Transposase
GAMIOLLD_01822 1.6e-69 istB - - L - - - IstB-like ATP binding protein
GAMIOLLD_01823 1.21e-57 - - - L - - - Integrase core domain
GAMIOLLD_01824 1.05e-65 - - - KLT - - - Protein tyrosine kinase
GAMIOLLD_01825 3.12e-157 - - - EGP ko:K08217 - br01600,ko00000,ko01504,ko02000 Transmembrane secretion effector

eggNOG-mapper v2.1.12 (Database: eggNOG v5.0.2, Mar. 2021 release)