ORF_ID e_value Gene_name EC_number CAZy COGs KEGG_ko KEGG_Pathway BRITE Description
PBONODFP_00001 6.1e-101 - - - K - - - Domain of unknown function (DUF1836)
PBONODFP_00002 5.99e-231 ybcH - - D ko:K06889 - ko00000 Alpha beta
PBONODFP_00003 5.31e-42 - - - M - - - dTDP-4-dehydrorhamnose reductase activity
PBONODFP_00005 4.54e-54 - - - - - - - -
PBONODFP_00007 2.31e-207 tnpA1 - - L - - - PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
PBONODFP_00008 3.25e-81 ytcD - - K - - - Transcriptional regulator, HxlR family
PBONODFP_00009 1.07e-91 - - - L - - - manually curated
PBONODFP_00010 2.21e-91 yheS - - S ko:K06158 - ko00000,ko03012 ABC transporter
PBONODFP_00011 9.38e-139 pncA - - Q - - - Isochorismatase family
PBONODFP_00012 2.66e-172 - - - - - - - -
PBONODFP_00013 5e-162 skfE - - V ko:K01990 - ko00000,ko00002,ko02000 ABC transporter
PBONODFP_00014 8.34e-86 lexA - - K ko:K07979 - ko00000,ko03000 Transcriptional regulator, GntR family
PBONODFP_00015 2.29e-223 ybcH - - D ko:K06889 - ko00000 Alpha beta
PBONODFP_00016 0.0 pepF2 - - E - - - Oligopeptidase F
PBONODFP_00017 1.4e-95 - - - K - - - Transcriptional regulator
PBONODFP_00018 1.86e-210 - - - - - - - -
PBONODFP_00019 1.23e-75 - - - - - - - -
PBONODFP_00020 1.44e-65 - - - - - - - -
PBONODFP_00021 0.0 spxB 1.2.3.3 - EH ko:K00158 ko00620,ko01100,map00620,map01100 ko00000,ko00001,ko01000 Belongs to the TPP enzyme family
PBONODFP_00022 1e-89 - - - - - - - -
PBONODFP_00023 1.19e-186 - - - S ko:K06889 - ko00000 Dienelactone hydrolase family
PBONODFP_00024 9.89e-74 ytpP - - CO - - - Thioredoxin
PBONODFP_00025 2.72e-262 metB 2.5.1.48 - E ko:K01739 ko00270,ko00450,ko00920,ko01100,ko01110,ko01130,ko01230,map00270,map00450,map00920,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Cys/Met metabolism PLP-dependent enzyme
PBONODFP_00026 1.3e-60 - - - - - - - -
PBONODFP_00027 1.57e-71 - - - - - - - -
PBONODFP_00028 6.94e-106 - - - S - - - Protein of unknown function (DUF2798)
PBONODFP_00029 4.05e-98 - - - - - - - -
PBONODFP_00030 4.15e-78 - - - - - - - -
PBONODFP_00031 3.5e-249 lplA 6.3.1.20 - H ko:K03800 ko00785,ko01100,map00785,map01100 ko00000,ko00001,ko01000 Lipoate-protein ligase
PBONODFP_00032 0.0 acm2 3.2.1.17 - NU ko:K01185 - ko00000,ko01000 Bacterial SH3 domain
PBONODFP_00033 1.63e-95 - - - G ko:K02744 ko00052,ko02060,map00052,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system fructose IIA component
PBONODFP_00034 3.82e-188 agaD - - G ko:K02747,ko:K02796,ko:K10986 ko00051,ko00052,ko00520,ko01100,ko02060,map00051,map00052,map00520,map01100,map02060 ko00000,ko00001,ko00002,ko02000 PTS system mannose/fructose/sorbose family IID component
PBONODFP_00035 5.2e-185 - - - G ko:K02746,ko:K10985 ko00052,ko02060,map00052,map02060 ko00000,ko00001,ko00002,ko02000 PTS system sorbose-specific iic component
PBONODFP_00036 4.28e-112 - 2.7.1.191 - K ko:K02745,ko:K02794,ko:K10984 ko00051,ko00052,ko00520,ko01100,ko02060,map00051,map00052,map00520,map01100,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system sorbose subfamily IIB component
PBONODFP_00037 5.87e-166 - - - K ko:K03710 - ko00000,ko03000 helix_turn_helix gluconate operon transcriptional repressor
PBONODFP_00038 2.51e-103 uspA3 - - T - - - universal stress protein
PBONODFP_00039 1.84e-205 rluA 5.4.99.23, 5.4.99.28, 5.4.99.29 - J ko:K06177,ko:K06180 - ko00000,ko01000,ko03009,ko03016 Responsible for synthesis of pseudouridine from uracil
PBONODFP_00040 4.05e-64 - - - K - - - Cro/C1-type HTH DNA-binding domain
PBONODFP_00041 1.38e-30 - - - S - - - Protein of unknown function (DUF2929)
PBONODFP_00042 6.19e-284 - - - M - - - Glycosyl transferases group 1
PBONODFP_00043 0.0 xfp 4.1.2.22, 4.1.2.9 - G ko:K01621 ko00030,ko00710,ko01100,ko01120,map00030,map00710,map01100,map01120 ko00000,ko00001,ko01000 Phosphoketolase
PBONODFP_00044 6.2e-204 - - - S - - - Putative esterase
PBONODFP_00045 3.53e-169 - - - K - - - Transcriptional regulator
PBONODFP_00046 4.75e-117 ybaK - - S ko:K03976 - ko00000,ko01000,ko03016 Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
PBONODFP_00047 6.08e-179 - - - - - - - -
PBONODFP_00048 4.85e-151 yagB - - S ko:K06950 - ko00000 Metal dependent phosphohydrolases with conserved 'HD' motif.
PBONODFP_00049 8.05e-179 rrp8 - - K - - - LytTr DNA-binding domain
PBONODFP_00050 1.7e-118 - - - K - - - Domain of unknown function (DUF1836)
PBONODFP_00051 2.2e-79 - - - - - - - -
PBONODFP_00052 2.61e-96 hsp2 - - O ko:K13993 ko04141,map04141 ko00000,ko00001,ko03110 Belongs to the small heat shock protein (HSP20) family
PBONODFP_00053 2.97e-76 - - - - - - - -
PBONODFP_00054 0.0 yhdP - - S - - - Transporter associated domain
PBONODFP_00055 1.18e-114 nrdI - - F ko:K03647 - ko00000 Belongs to the NrdI family
PBONODFP_00056 0.0 nhaP3 - - P ko:K03316 - ko00000 Sodium proton antiporter
PBONODFP_00057 1.94e-269 yttB - - EGP - - - Major Facilitator
PBONODFP_00058 2.84e-82 - - - K - - - helix_turn_helix, mercury resistance
PBONODFP_00059 2.55e-219 - - - C - - - Zinc-binding dehydrogenase
PBONODFP_00060 4.71e-74 - - - S - - - SdpI/YhfL protein family
PBONODFP_00061 0.0 zwf 1.1.1.363, 1.1.1.49 - G ko:K00036 ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,ko05230,map00030,map00480,map01100,map01110,map01120,map01130,map01200,map05230 ko00000,ko00001,ko00002,ko01000,ko04147 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
PBONODFP_00062 0.0 gabR - - K ko:K00375 - ko00000,ko03000 Bacterial regulatory proteins, gntR family
PBONODFP_00063 1.02e-277 araT2 - - E ko:K00841 ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Aminotransferase
PBONODFP_00064 1.84e-204 dapA 4.3.3.7 - E ko:K01714 ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
PBONODFP_00065 3.59e-26 - - - - - - - -
PBONODFP_00066 6.68e-139 - - - S ko:K07090 - ko00000 membrane transporter protein
PBONODFP_00067 8.13e-208 mleR - - K - - - LysR family
PBONODFP_00068 1.29e-148 - - - GM - - - NAD(P)H-binding
PBONODFP_00069 1.57e-123 - - - K - - - Acetyltransferase (GNAT) family
PBONODFP_00070 0.0 addA 3.6.4.12 - L ko:K16898 - ko00000,ko01000,ko03400 ATP-dependent helicase nuclease subunit A
PBONODFP_00071 0.0 rexB 3.6.4.12 - L ko:K16899 - ko00000,ko01000,ko03400 The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
PBONODFP_00072 3.84e-218 oroP - - S ko:K09936 ko02024,map02024 ko00000,ko00001,ko02000 Putative inner membrane exporter, YdcZ
PBONODFP_00073 6.64e-146 pyrE 2.4.2.10 - F ko:K00762 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
PBONODFP_00074 1.09e-161 pyrF 4.1.1.23 - F ko:K01591 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
PBONODFP_00075 1.04e-218 pyrD 1.3.1.14, 1.3.98.1 - F ko:K00226,ko:K17828 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
PBONODFP_00076 0.0 carB 6.3.5.5 - F ko:K01955 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Carbamoyl-phosphate synthase
PBONODFP_00077 3.36e-272 carA 6.3.5.5 - F ko:K01956 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Carbamoyl-phosphate synthetase glutamine chain
PBONODFP_00078 3.38e-310 pyrC 3.5.2.3 - F ko:K01465 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
PBONODFP_00079 1.22e-220 pyrB 2.1.3.2 - F ko:K00609 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the ATCase OTCase family
PBONODFP_00080 7.13e-123 pyrR 2.4.2.9 - F ko:K02825 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko01000,ko03000 Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
PBONODFP_00081 0.0 pucR_2 - - QT ko:K09684 - ko00000,ko03000 Purine catabolism regulatory protein-like family
PBONODFP_00082 4.41e-305 pbuX - - F ko:K03458,ko:K16169 - ko00000,ko02000 xanthine permease
PBONODFP_00083 2.31e-279 pbuG - - S ko:K06901 - ko00000,ko02000 Permease family
PBONODFP_00084 4.71e-208 - - - GM - - - NmrA-like family
PBONODFP_00085 1.03e-198 - - - T - - - EAL domain
PBONODFP_00086 2.62e-121 - - - - - - - -
PBONODFP_00087 0.0 yijG - GT2 M ko:K11936 ko02026,map02026 ko00000,ko00001,ko01000,ko01003,ko02000 Glycosyl transferase
PBONODFP_00088 9.07e-158 - - - E - - - Methionine synthase
PBONODFP_00089 2.71e-280 purD 6.3.4.13 - F ko:K01945 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Belongs to the GARS family
PBONODFP_00090 5.8e-110 - - - L - - - Integrase core domain
PBONODFP_00097 2.66e-18 - - - - - - - -
PBONODFP_00098 6.01e-45 feoA - - P ko:K04758 - ko00000,ko02000 FeoA domain
PBONODFP_00099 3.04e-71 rbfA - - J ko:K02834 - ko00000,ko03009 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
PBONODFP_00100 0.0 - - - G - - - Major Facilitator
PBONODFP_00101 2.21e-276 aroC 4.2.3.5 - E ko:K01736 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
PBONODFP_00102 9.84e-123 - - - - - - - -
PBONODFP_00103 1.16e-302 aroA 2.5.1.19 - E ko:K00800 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
PBONODFP_00104 3.1e-248 tyrA 1.3.1.12 - E ko:K04517 ko00400,ko00401,ko01100,ko01110,ko01130,ko01230,map00400,map00401,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 prephenate dehydrogenase
PBONODFP_00105 5.91e-114 aroK 2.7.1.71 - F ko:K00891 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
PBONODFP_00106 6.29e-221 truB 5.4.99.25 - J ko:K03177,ko:K03483 - ko00000,ko01000,ko03000,ko03016 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
PBONODFP_00107 1.25e-240 ribF 2.7.1.26, 2.7.7.2 - H ko:K11753 ko00740,ko01100,ko01110,map00740,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Belongs to the ribF family
PBONODFP_00108 1.19e-169 budA 4.1.1.5 - Q ko:K01575 ko00650,ko00660,map00650,map00660 ko00000,ko00001,ko01000 Alpha-acetolactate decarboxylase
PBONODFP_00109 4.42e-248 hrcA - - K ko:K03705 - ko00000,ko03000 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
PBONODFP_00110 1.72e-115 grpE - - O ko:K03687 - ko00000,ko03029,ko03110 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
PBONODFP_00111 0.0 dnaK - - O ko:K04043 ko03018,ko04212,ko05152,map03018,map04212,map05152 ko00000,ko00001,ko03019,ko03029,ko03110,ko04147 Heat shock 70 kDa protein
PBONODFP_00112 2.54e-266 dnaJ - - O ko:K03686 - ko00000,ko03029,ko03110 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
PBONODFP_00113 4.21e-266 pbpX2 - - V - - - Beta-lactamase
PBONODFP_00114 8.59e-27 dltX - - S - - - D-Ala-teichoic acid biosynthesis protein
PBONODFP_00115 0.0 dltA 6.1.1.13 - H ko:K03367 ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150 ko00000,ko00001,ko00002,ko01000,ko01504 Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PBONODFP_00116 1.14e-297 dltB - - M ko:K03739 ko01503,ko02020,ko05150,map01503,map02020,map05150 ko00000,ko00001,ko00002,ko01504 MBOAT, membrane-bound O-acyltransferase family
PBONODFP_00117 5.75e-47 dltC 6.1.1.13 - J ko:K14188 ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150 ko00000,ko00001,ko00002,ko01000,ko01504 Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PBONODFP_00118 1.68e-312 dltD - - M ko:K03740 ko01503,ko02020,ko05150,map01503,map02020,map05150 ko00000,ko00001,ko00002,ko01504 Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
PBONODFP_00119 0.0 lepA - - M ko:K03596 ko05134,map05134 ko00000,ko00001 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
PBONODFP_00120 1.73e-67 - - - - - - - -
PBONODFP_00121 4.78e-65 - - - - - - - -
PBONODFP_00122 1.11e-147 yxlJ 3.2.2.21 - L ko:K03652 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 Belongs to the DNA glycosylase MPG family
PBONODFP_00123 2.04e-226 prmA - - J ko:K02687 - ko00000,ko01000,ko03009 Ribosomal protein L11 methyltransferase
PBONODFP_00124 3.13e-172 rsmE 2.1.1.193 - J ko:K09761 - ko00000,ko01000,ko03009 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
PBONODFP_00125 2.56e-76 - - - - - - - -
PBONODFP_00126 0.0 relA 2.7.6.5 - KT ko:K00951 ko00230,map00230 ko00000,ko00001,ko01000 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
PBONODFP_00127 8.2e-102 dtd - - J ko:K07560 - ko00000,ko01000,ko03016 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
PBONODFP_00128 5.97e-151 yjcF - - J - - - HAD-hyrolase-like
PBONODFP_00129 5.35e-213 - - - G - - - Fructosamine kinase
PBONODFP_00130 5.7e-200 lytH 3.5.1.28 - M ko:K01448 ko01503,map01503 ko00000,ko00001,ko00002,ko01000,ko01011,ko03036 N-acetylmuramoyl-L-alanine amidase
PBONODFP_00131 2.47e-310 hisS 6.1.1.21 - J ko:K01892 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 histidyl-tRNA synthetase
PBONODFP_00132 0.0 aspS 6.1.1.12 - J ko:K01876 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
PBONODFP_00133 1.06e-131 msrA 1.8.4.11, 1.8.4.12 - O ko:K07304,ko:K12267 - ko00000,ko01000 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PBONODFP_00134 4.35e-204 yitT - - S - - - Uncharacterised 5xTM membrane BCR, YitT family COG1284
PBONODFP_00135 1.84e-284 tagB 2.7.8.44 - M ko:K21285 - ko00000,ko01000 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
PBONODFP_00136 1.42e-217 nfo 3.1.21.2 - L ko:K01151 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
PBONODFP_00137 3e-165 - - - C - - - Enoyl-(Acyl carrier protein) reductase
PBONODFP_00138 2.32e-194 yqfL 2.7.11.33, 2.7.4.28 - F ko:K09773 - ko00000,ko01000 Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
PBONODFP_00139 1.09e-30 rpsU - - J ko:K02970 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bS21 family
PBONODFP_00140 9.21e-94 yqeY - - S ko:K09117 - ko00000 YqeY-like protein
PBONODFP_00141 4.81e-229 phoH - - T ko:K06217 - ko00000 phosphate starvation-inducible protein PhoH
PBONODFP_00142 7.7e-110 ybeY - - S ko:K07042 - ko00000,ko03009 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
PBONODFP_00143 1.15e-94 dgkA 2.7.1.107, 2.7.1.66 - M ko:K00887,ko:K00901 ko00550,ko00561,ko00564,ko01100,ko01110,ko04070,ko04072,ko05231,map00550,map00561,map00564,map01100,map01110,map04070,map04072,map05231 ko00000,ko00001,ko01000 Diacylglycerol kinase
PBONODFP_00144 7.92e-217 era - - S ko:K03595 - ko00000,ko03009,ko03029 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
PBONODFP_00145 2.84e-189 recO - - L ko:K03584 ko03440,map03440 ko00000,ko00001,ko03400 Involved in DNA repair and RecF pathway recombination
PBONODFP_00146 8.64e-224 glyQ 6.1.1.14 - J ko:K01878 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 glycyl-tRNA synthetase alpha subunit
PBONODFP_00147 0.0 glyS 6.1.1.14 - J ko:K01879 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Glycyl-tRNA synthetase beta subunit
PBONODFP_00148 0.0 dnaG - - L ko:K02316 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
PBONODFP_00149 1.74e-251 sigA - - K ko:K03086 - ko00000,ko03021 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
PBONODFP_00150 6.86e-85 ytrA - - K ko:K07979 - ko00000,ko03000 helix_turn_helix gluconate operon transcriptional repressor
PBONODFP_00151 2.45e-213 - - - V ko:K01990 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
PBONODFP_00152 5.01e-254 - - - - - - - -
PBONODFP_00153 2.48e-252 - - - - - - - -
PBONODFP_00154 2.02e-168 - - - S ko:K01992 - ko00000,ko00002,ko02000 ABC-2 family transporter protein
PBONODFP_00155 4.36e-208 - - - V ko:K01990 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
PBONODFP_00156 0.000138 yjdF - - S - - - Protein of unknown function (DUF2992)
PBONODFP_00157 1.28e-148 - - - S - - - Psort location CytoplasmicMembrane, score
PBONODFP_00158 3.89e-94 - - - K - - - MarR family
PBONODFP_00159 6.64e-109 - - - K ko:K03827 - ko00000,ko01000 Acetyltransferase (GNAT) domain
PBONODFP_00161 3.43e-203 yvfR - - V ko:K01990 - ko00000,ko00002,ko02000 ABC transporter
PBONODFP_00162 1.27e-174 XK27_09830 - - V ko:K01992 - ko00000,ko00002,ko02000 ABC-2 type transporter
PBONODFP_00163 2.08e-265 desK 2.7.13.3 - T ko:K07778 ko02020,map02020 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Histidine kinase
PBONODFP_00164 1.11e-134 desR - - K ko:K02479,ko:K07693 ko02020,map02020 ko00000,ko00001,ko00002,ko02022 helix_turn_helix, Lux Regulon
PBONODFP_00165 0.0 nox4 - - C - - - Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
PBONODFP_00167 2.66e-221 cryZ 1.1.1.1 - C ko:K00001 ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220 ko00000,ko00001,ko01000 nadph quinone reductase
PBONODFP_00168 5.72e-207 - - - K - - - Transcriptional regulator
PBONODFP_00169 2.12e-102 - - - S - - - Uncharacterized protein conserved in bacteria (DUF2255)
PBONODFP_00170 8.72e-147 - - - GM - - - NmrA-like family
PBONODFP_00171 2.63e-206 - - - S - - - Alpha beta hydrolase
PBONODFP_00172 3.69e-169 - - - K - - - Helix-turn-helix domain, rpiR family
PBONODFP_00173 2.31e-132 thgA3 2.3.1.18, 2.3.1.79 - S ko:K00633,ko:K00661 - ko00000,ko01000 Maltose O-acetyltransferase
PBONODFP_00174 7.51e-147 - 3.1.3.18 - S ko:K01091 ko00630,ko01100,ko01110,ko01130,map00630,map01100,map01110,map01130 ko00000,ko00001,ko01000 haloacid dehalogenase-like hydrolase
PBONODFP_00175 1.64e-36 pts14C - - G ko:K02761 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko02000 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PBONODFP_00176 8.13e-90 - - - S - - - Alpha/beta hydrolase of unknown function (DUF915)
PBONODFP_00177 3.25e-59 modF 3.6.3.34 - P ko:K02013,ko:K05776 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ABC transporter
PBONODFP_00178 2.72e-89 - - - - - - - -
PBONODFP_00179 2.81e-202 sdaAA 4.3.1.17 - E ko:K01752 ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230 ko00000,ko00001,ko01000 L-serine dehydratase, iron-sulfur-dependent, alpha subunit
PBONODFP_00180 1.52e-158 sdhB 4.3.1.17 - E ko:K01752 ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230 ko00000,ko00001,ko01000 Serine dehydratase beta chain
PBONODFP_00181 2.28e-290 sdaC - - E ko:K03837 - ko00000,ko02000 amino acid
PBONODFP_00182 2.38e-311 serS 6.1.1.11 - J ko:K01875 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
PBONODFP_00183 0.0 pyrG 6.3.4.2 - F ko:K01937 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
PBONODFP_00184 2.96e-89 rpoE - - K ko:K03048 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 br01611,ko00000,ko00001,ko00002,ko03021,ko03400 Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
PBONODFP_00185 2.87e-101 ywiB - - S - - - Domain of unknown function (DUF1934)
PBONODFP_00186 8.97e-200 lipL 2.3.1.200, 2.3.1.204 - H ko:K16869,ko:K18821 - ko00000,ko01000 biotin lipoate A B protein ligase
PBONODFP_00187 0.0 ywfO - - S ko:K06885 - ko00000 HD domain protein
PBONODFP_00188 1.19e-190 yxeH - - S - - - hydrolase
PBONODFP_00189 7.12e-178 - - - - - - - -
PBONODFP_00190 2.59e-232 - - - S - - - DUF218 domain
PBONODFP_00191 3.26e-228 prs 2.7.6.1 - F ko:K00948 ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PBONODFP_00192 1.15e-195 bla1 3.5.2.6 - V ko:K17836 ko00311,ko01130,ko01501,map00311,map01130,map01501 ko00000,ko00001,ko00002,ko01000,ko01504 Beta-lactamase enzyme family
PBONODFP_00193 3.28e-298 glmU 2.3.1.157, 2.7.7.23 - M ko:K04042 ko00520,ko01100,ko01130,map00520,map01100,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
PBONODFP_00194 1.96e-189 purR - - F ko:K09685 - ko00000,ko03000 pur operon repressor
PBONODFP_00195 5.3e-49 - - - - - - - -
PBONODFP_00196 2.4e-56 - - - S - - - ankyrin repeats
PBONODFP_00197 6.39e-169 znuB - - U ko:K02075,ko:K09816 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC 3 transport family
PBONODFP_00198 8.05e-166 adcC - - P ko:K02074,ko:K09817,ko:K11710 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ABC transporter
PBONODFP_00199 1.56e-229 - - - S ko:K06889 - ko00000 Prolyl oligopeptidase family
PBONODFP_00200 1.25e-206 ispE 2.7.1.148 - F ko:K00919,ko:K16924 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000,ko02000 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
PBONODFP_00201 6.87e-50 veg - - S - - - Biofilm formation stimulator VEG
PBONODFP_00202 7.17e-203 ksgA 2.1.1.182 - J ko:K02528 - ko00000,ko01000,ko03009 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
PBONODFP_00203 1.87e-126 rnmV 3.1.26.8 - J ko:K05985 - ko00000,ko01000 Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
PBONODFP_00204 1.63e-187 tatD - - L ko:K03424 - ko00000,ko01000 hydrolase, TatD family
PBONODFP_00205 3.91e-268 - - - EGP ko:K02030 - ko00000,ko00002,ko02000 Drug resistance transporter Bcr CflA subfamily
PBONODFP_00206 0.0 metG 6.1.1.10 - J ko:K01874 ko00450,ko00970,map00450,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
PBONODFP_00207 6.59e-92 - - - F - - - DNA mismatch repair protein MutT
PBONODFP_00208 1.12e-205 yunF - - F - - - Protein of unknown function DUF72
PBONODFP_00209 2.14e-171 cobB - - K ko:K12410 - ko00000,ko01000 SIR2 family
PBONODFP_00210 4.65e-229 - - - - - - - -
PBONODFP_00211 5.59e-290 mvaA 1.1.1.88, 2.3.1.9 - C ko:K00054,ko:K00626 ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the HMG-CoA reductase family
PBONODFP_00212 1.36e-214 ppx 3.6.1.11, 3.6.1.40 - FP ko:K01524 ko00230,map00230 ko00000,ko00001,ko01000 exopolyphosphatase
PBONODFP_00213 5.08e-194 - - - S - - - Psort location Cytoplasmic, score
PBONODFP_00214 1.23e-262 - - - - - - - -
PBONODFP_00215 2.94e-244 dus - - J - - - Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PBONODFP_00216 3.97e-174 yecA - - K - - - Helix-turn-helix domain, rpiR family
PBONODFP_00217 6.97e-209 - - - GK - - - ROK family
PBONODFP_00218 0.0 - 3.2.1.86 GT1 G ko:K01223 ko00010,ko00500,map00010,map00500 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 1 family
PBONODFP_00219 0.0 celB - - G ko:K02761 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko02000 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PBONODFP_00220 3.55e-99 - - - S - - - Domain of unknown function (DUF3284)
PBONODFP_00221 9.68e-34 - - - - - - - -
PBONODFP_00222 0.0 chbC - - G ko:K02761 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko02000 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PBONODFP_00223 2.69e-166 - - - K - - - UbiC transcription regulator-associated domain protein
PBONODFP_00224 8.19e-244 trpS 6.1.1.2 - J ko:K01867 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the class-I aminoacyl-tRNA synthetase family
PBONODFP_00225 3.54e-182 mtnU 3.5.1.3 - S ko:K13566 ko00250,map00250 ko00000,ko00001,ko01000 Carbon-nitrogen hydrolase
PBONODFP_00226 0.0 - - - L - - - DNA helicase
PBONODFP_00227 4.23e-64 axe - - K ko:K21498 - ko00000,ko02048 Helix-turn-helix XRE-family like proteins
PBONODFP_00228 3.12e-48 - - - S ko:K07334 - ko00000,ko02048 RelE-like toxin of type II toxin-antitoxin system HigB
PBONODFP_00229 1.36e-146 - - - S ko:K07052 - ko00000 CAAX protease self-immunity
PBONODFP_00230 7.55e-143 - - - V ko:K07052 - ko00000 CAAX protease self-immunity
PBONODFP_00231 1.89e-150 plnU - - S ko:K07052 - ko00000 CAAX protease self-immunity
PBONODFP_00232 1.24e-138 - - - S ko:K07052 - ko00000 CAAX protease self-immunity
PBONODFP_00233 6.08e-309 mesE - - M ko:K12293,ko:K20345 ko02020,ko02024,map02020,map02024 ko00000,ko00001,ko02000 Transport protein ComB
PBONODFP_00234 0.0 comA - - V ko:K06147,ko:K06148,ko:K12292,ko:K20344 ko02010,ko02020,ko02024,map02010,map02020,map02024 ko00000,ko00001,ko01000,ko02000 ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
PBONODFP_00235 8.82e-32 - - - - - - - -
PBONODFP_00236 7.89e-31 plnF - - - - - - -
PBONODFP_00237 1.64e-166 - - - S ko:K07052 - ko00000 CAAX protease self-immunity
PBONODFP_00238 7.96e-169 plnD - - K ko:K07707 ko02020,ko02024,map02020,map02024 ko00000,ko00001,ko00002,ko02022 LytTr DNA-binding domain
PBONODFP_00239 5.61e-169 sppR - - K ko:K07707 ko02020,ko02024,map02020,map02024 ko00000,ko00001,ko00002,ko02022 LytTr DNA-binding domain
PBONODFP_00240 3.92e-290 plnB 2.7.13.3 - T ko:K07706 ko02020,ko02024,map02020,map02024 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 GHKL domain
PBONODFP_00241 1.9e-25 plnA - - - - - - -
PBONODFP_00242 1.22e-36 - - - - - - - -
PBONODFP_00243 2.08e-160 plnP - - S - - - CAAX protease self-immunity
PBONODFP_00244 3.77e-289 - - - M - - - Glycosyl transferase family 2
PBONODFP_00246 4.08e-39 - - - - - - - -
PBONODFP_00247 8.53e-34 plnJ - - - - - - -
PBONODFP_00248 3.29e-32 plnK - - - - - - -
PBONODFP_00249 9.76e-153 - - - - - - - -
PBONODFP_00250 6.24e-25 plnR - - - - - - -
PBONODFP_00251 1.15e-43 - - - - - - - -
PBONODFP_00253 8.8e-265 napA - - P - - - Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
PBONODFP_00254 0.0 brnQ - - U ko:K03311 - ko00000 Component of the transport system for branched-chain amino acids
PBONODFP_00255 8.38e-192 - - - S - - - hydrolase
PBONODFP_00256 2.35e-212 - - - K - - - Transcriptional regulator
PBONODFP_00257 7.16e-76 fptC - - U ko:K02770 ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060 ko00000,ko00001,ko00002,ko02000 Phosphotransferase system, EIIC
PBONODFP_00258 0.0 mngB 3.2.1.170 GH38 G ko:K15524 - ko00000,ko01000 Glycosyl hydrolases family 38 N-terminal domain
PBONODFP_00259 1.29e-115 scrK 2.7.1.4 - GK ko:K00847 ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100 ko00000,ko00001,ko01000 ROK family
PBONODFP_00260 8.69e-191 - - - S - - - haloacid dehalogenase-like hydrolase
PBONODFP_00261 5.67e-196 qorB 1.6.5.2 - GM ko:K19267 ko00130,ko01110,map00130,map01110 ko00000,ko00001,ko01000 NmrA-like family
PBONODFP_00262 3.91e-211 - - - K - - - LysR substrate binding domain
PBONODFP_00263 6.36e-297 - - - - - - - -
PBONODFP_00264 2.01e-307 - - - S - - - Neutral/alkaline non-lysosomal ceramidase, N-terminal
PBONODFP_00265 0.0 - - - G ko:K02755,ko:K02756,ko:K02757 ko02060,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 phosphotransferase system
PBONODFP_00266 4.17e-263 - 4.1.1.45 - E ko:K03392,ko:K07045 ko00380,ko01100,map00380,map01100 ko00000,ko00001,ko00002,ko01000 amidohydrolase
PBONODFP_00267 6.26e-101 - - - - - - - -
PBONODFP_00268 0.0 rumA_1 2.1.1.190, 2.1.1.35 - J ko:K00557,ko:K03215 - ko00000,ko01000,ko03009,ko03016 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PBONODFP_00269 3.56e-152 ybbL - - S ko:K02068 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
PBONODFP_00270 2.44e-165 ybbM - - S ko:K02069 - ko00000,ko00002,ko02000 Uncharacterised protein family (UPF0014)
PBONODFP_00271 7.52e-263 - - - S - - - DUF218 domain
PBONODFP_00272 1.57e-234 purR2 - - K ko:K02529 - ko00000,ko03000 Periplasmic binding proteins and sugar binding domain of LacI family
PBONODFP_00273 0.0 malL 3.2.1.20 GH31 G ko:K01187 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 Alpha amylase, catalytic domain protein
PBONODFP_00274 0.0 pts26BCA 2.7.1.211 - G ko:K02808,ko:K02809,ko:K02810 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 phosphotransferase system
PBONODFP_00275 4.17e-167 - - - S - - - Putative adhesin
PBONODFP_00276 4.24e-133 - - - S - - - Protein of unknown function (DUF1700)
PBONODFP_00277 8.52e-70 - - - K ko:K10947 - ko00000,ko03000 Transcriptional regulator
PBONODFP_00278 1.07e-127 - - - KT - - - response to antibiotic
PBONODFP_00279 7.26e-161 tcyA - - ET ko:K02424 ko02010,map02010 ko00000,ko00001,ko00002,ko02000,ko02035 Belongs to the bacterial solute-binding protein 3 family
PBONODFP_00280 3.02e-176 - - - E ko:K10010 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ABC transporter, ATP-binding protein
PBONODFP_00281 2.11e-158 tcyB - - E ko:K10009 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter
PBONODFP_00282 2.13e-167 tcyA - - ET ko:K02424 ko02010,map02010 ko00000,ko00001,ko00002,ko02000,ko02035 Belongs to the bacterial solute-binding protein 3 family
PBONODFP_00283 2.07e-302 - - - EK - - - Aminotransferase, class I
PBONODFP_00284 3.36e-216 - - - K - - - LysR substrate binding domain
PBONODFP_00285 2.12e-188 - - - S - - - Alpha/beta hydrolase of unknown function (DUF915)
PBONODFP_00286 3.45e-198 - - - S - - - Bacterial membrane protein, YfhO
PBONODFP_00287 1.66e-288 nupG - - F ko:K16323 - ko00000,ko02000 Nucleoside
PBONODFP_00288 1.81e-168 rsmG 2.1.1.170 - J ko:K03501 - ko00000,ko01000,ko03009,ko03036 Specifically methylates the N7 position of a guanine in 16S rRNA
PBONODFP_00289 7.39e-192 noc - - K ko:K03497 - ko00000,ko03000,ko03036,ko04812 Belongs to the ParB family
PBONODFP_00290 1.01e-175 soj - - D ko:K03496 - ko00000,ko03036,ko04812 Sporulation initiation inhibitor
PBONODFP_00291 6.14e-202 spo0J - - K ko:K03497 - ko00000,ko03000,ko03036,ko04812 Belongs to the ParB family
PBONODFP_00292 1.4e-40 yyzM - - S - - - Bacterial protein of unknown function (DUF951)
PBONODFP_00293 6.6e-255 ychF - - J ko:K06942 - ko00000,ko03009 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
PBONODFP_00294 3.49e-160 - - - S - - - Protein of unknown function (DUF1129)
PBONODFP_00295 3.49e-270 guaB 1.1.1.205 - F ko:K00088 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko04147 Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
PBONODFP_00296 3.84e-207 prsA 5.2.1.8 - M ko:K01802,ko:K07533 - ko00000,ko01000,ko03110 Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
PBONODFP_00297 2.4e-161 - - - S - - - Protein of unknown function (DUF1275)
PBONODFP_00298 1.14e-159 vanR - - K - - - response regulator
PBONODFP_00299 5.61e-273 hpk31 - - T - - - Histidine kinase
PBONODFP_00300 2.18e-304 dacA 3.4.16.4 - M ko:K07258 ko00550,ko01100,map00550,map01100 ko00000,ko00001,ko01000,ko01002,ko01011 Belongs to the peptidase S11 family
PBONODFP_00301 1.66e-116 ywnH 2.3.1.183 - M ko:K03823 ko00440,ko01130,map00440,map01130 ko00000,ko00001,ko01000 Acetyltransferase (GNAT) domain
PBONODFP_00302 2.05e-167 - - - E - - - branched-chain amino acid
PBONODFP_00303 5.93e-73 - - - S - - - branched-chain amino acid
PBONODFP_00304 9.65e-141 - - - S ko:K07090 - ko00000 membrane transporter protein
PBONODFP_00305 1.49e-72 - - - - - - - -
PBONODFP_00306 9.69e-99 - - - S - - - Psort location Cytoplasmic, score
PBONODFP_00307 2.47e-125 - - - S - - - Domain of unknown function (DUF4352)
PBONODFP_00308 5.03e-37 - - - S - - - Protein of unknown function (DUF4064)
PBONODFP_00309 1.66e-259 pkn2 - - KLT - - - Protein tyrosine kinase
PBONODFP_00310 9.51e-210 - - - - - - - -
PBONODFP_00311 1.05e-294 cfa 2.1.1.79 - M ko:K00574 - ko00000,ko01000 cyclopropane-fatty-acyl-phospholipid synthase
PBONODFP_00312 5.21e-151 - - - - - - - -
PBONODFP_00313 9.28e-271 xylR - - GK - - - ROK family
PBONODFP_00314 9.26e-233 ydbI - - K - - - AI-2E family transporter
PBONODFP_00315 5.06e-168 gpmA 5.4.2.11 - G ko:K01834 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PBONODFP_00316 6.79e-53 - - - - - - - -
PBONODFP_00318 8.53e-45 - - - L ko:K07483 - ko00000 transposase activity
PBONODFP_00319 1.34e-05 - - - L ko:K07483 - ko00000 transposase activity
PBONODFP_00320 6.49e-135 - - - K - - - Bacterial regulatory proteins, tetR family
PBONODFP_00321 2.52e-85 - - - S - - - Domain of unknown function (DUF4440)
PBONODFP_00322 0.0 qacA - - EGP - - - Fungal trichothecene efflux pump (TRI12)
PBONODFP_00323 5.35e-102 - - - GM - - - SnoaL-like domain
PBONODFP_00324 1.93e-139 - - - GM - - - NAD(P)H-binding
PBONODFP_00325 4.01e-142 - 1.1.1.346 - S ko:K06221 - ko00000,ko01000 reductase
PBONODFP_00326 1.75e-149 yciB - - M - - - ErfK YbiS YcfS YnhG
PBONODFP_00327 3e-47 - - CBM50 NU ko:K02395,ko:K19223 - ko00000,ko01000,ko01002,ko01011,ko02035 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
PBONODFP_00328 5.19e-50 acm2 3.2.1.17 - NU ko:K01185 - ko00000,ko01000 Bacterial SH3 domain
PBONODFP_00329 9.09e-260 - - - C - - - Belongs to the LDH2 MDH2 oxidoreductase family
PBONODFP_00330 5.31e-66 - - - K - - - Helix-turn-helix domain
PBONODFP_00331 2.06e-81 - - - V ko:K02003 - ko00000,ko00002,ko02000 ABC transporter
PBONODFP_00332 0.0 rpoC 2.7.7.6 - K ko:K03046 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PBONODFP_00333 0.0 rpoB 2.7.7.6 - K ko:K03043 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PBONODFP_00334 1.16e-140 - - - K - - - Bacterial regulatory proteins, tetR family
PBONODFP_00335 0.0 clpC - - O ko:K03696 ko01100,map01100 ko00000,ko03110 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
PBONODFP_00336 9.78e-102 ctsR - - K ko:K03708 - ko00000,ko03000 Belongs to the CtsR family
PBONODFP_00344 1.62e-294 serS 6.1.1.11 - J ko:K01875 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
PBONODFP_00345 1.11e-148 dgk2 - - F - - - deoxynucleoside kinase
PBONODFP_00346 1.51e-152 dacB 3.4.17.14 - M ko:K07260 ko00550,ko01100,ko01502,ko02020,map00550,map01100,map01502,map02020 ko00000,ko00001,ko00002,ko01000,ko01002,ko01011,ko01504 D-alanyl-D-alanine carboxypeptidase
PBONODFP_00347 0.0 lysP - - E ko:K03293,ko:K11733 - ko00000,ko02000 amino acid
PBONODFP_00348 0.0 alsS 2.2.1.6 - EH ko:K01652 ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the TPP enzyme family
PBONODFP_00349 1.7e-118 - - - K - - - Transcriptional regulator
PBONODFP_00350 3.03e-129 yjcK 2.3.1.128 - J ko:K03790 - ko00000,ko01000,ko03009 Acetyltransferase (GNAT) domain
PBONODFP_00351 3.88e-198 - - - I - - - alpha/beta hydrolase fold
PBONODFP_00352 2.05e-153 - - - I - - - phosphatase
PBONODFP_00353 2.34e-242 brpA - - K - - - Cell envelope-like function transcriptional attenuator common domain protein
PBONODFP_00354 7.76e-100 - - - S - - - Threonine/Serine exporter, ThrE
PBONODFP_00355 4.6e-169 - - - S - - - Putative threonine/serine exporter
PBONODFP_00356 1.78e-42 cspC - - K ko:K03704 - ko00000,ko03000 Cold shock protein
PBONODFP_00357 2.94e-155 mntR - - K ko:K03709 - ko00000,ko03000 iron dependent repressor
PBONODFP_00358 1.36e-77 - - - - - - - -
PBONODFP_00359 7.79e-112 - - - K - - - MerR HTH family regulatory protein
PBONODFP_00360 0.0 ycnB - - U - - - Belongs to the major facilitator superfamily
PBONODFP_00361 2.72e-152 - - - S - - - Domain of unknown function (DUF4811)
PBONODFP_00362 9.04e-179 - - - - - - - -
PBONODFP_00363 1.75e-47 - - - K - - - MerR HTH family regulatory protein
PBONODFP_00364 1.43e-155 azlC - - E - - - branched-chain amino acid
PBONODFP_00365 2.41e-66 azlD - - S - - - Branched-chain amino acid transport protein (AzlD)
PBONODFP_00366 0.0 asnB 6.3.5.4 - E ko:K01953 ko00250,ko01100,ko01110,map00250,map01100,map01110 ko00000,ko00001,ko01000,ko01002 Asparagine synthase
PBONODFP_00367 1.99e-280 dapG 2.7.2.4 - E ko:K00928 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Amino acid kinase family
PBONODFP_00368 0.0 murE 6.3.2.13 - M ko:K01928 ko00300,ko00550,map00300,map00550 ko00000,ko00001,ko01000,ko01011 Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
PBONODFP_00369 0.0 xylP2 - - G - - - symporter
PBONODFP_00370 1.3e-240 - - - I - - - alpha/beta hydrolase fold
PBONODFP_00371 3.33e-64 - - - - - - - -
PBONODFP_00372 1.19e-153 gpm5 - - G - - - Phosphoglycerate mutase family
PBONODFP_00373 1.22e-132 - - - K - - - FR47-like protein
PBONODFP_00374 8.44e-163 yibF - - S - - - overlaps another CDS with the same product name
PBONODFP_00375 3.42e-280 yibE - - S - - - overlaps another CDS with the same product name
PBONODFP_00376 6.48e-243 - - - - - - - -
PBONODFP_00377 1.44e-179 - - - S - - - NADPH-dependent FMN reductase
PBONODFP_00378 5.06e-68 - - - K - - - helix_turn_helix, Arsenical Resistance Operon Repressor
PBONODFP_00379 1.65e-209 rluD2 5.4.99.23 - J ko:K06180 - ko00000,ko01000,ko03009 Responsible for synthesis of pseudouridine from uracil
PBONODFP_00380 0.0 recQ 3.6.4.12 - L ko:K03654 ko03018,map03018 ko00000,ko00001,ko01000,ko03400 ATP-dependent DNA helicase RecQ
PBONODFP_00381 4.95e-44 - - - L - - - leucine-zipper of insertion element IS481
PBONODFP_00382 1.56e-55 - - - - - - - -
PBONODFP_00383 7.64e-290 - - - L - - - DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
PBONODFP_00384 0.0 pepDA - - E ko:K08659 - ko00000,ko01000,ko01002 Dipeptidase
PBONODFP_00385 3.39e-255 asnA 6.3.1.1 - F ko:K01914 ko00250,ko00460,ko01100,ko01110,ko01230,map00250,map00460,map01100,map01110,map01230 ko00000,ko00001,ko01000 aspartate--ammonia ligase
PBONODFP_00386 0.0 asnS 6.1.1.22 - J ko:K01893 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Asparaginyl-tRNA synthetase
PBONODFP_00387 4.71e-149 azoR - - I ko:K01118 - ko00000,ko01000 Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
PBONODFP_00388 3.54e-105 - - - K - - - Transcriptional regulator
PBONODFP_00390 0.0 - - - C - - - FMN_bind
PBONODFP_00391 1.6e-219 - - - K - - - Transcriptional regulator
PBONODFP_00392 1.09e-123 - - - K - - - Helix-turn-helix domain
PBONODFP_00393 7.45e-180 - - - K - - - sequence-specific DNA binding
PBONODFP_00394 1.27e-115 - - - S - - - AAA domain
PBONODFP_00395 1.42e-08 - - - - - - - -
PBONODFP_00396 1.13e-62 - - - M - - - MucBP domain
PBONODFP_00397 2.92e-38 pspC - - KT ko:K03973 - ko00000,ko02048,ko03000 PspC domain
PBONODFP_00398 5.13e-144 azo1 1.5.1.36, 1.7.1.6 - S ko:K03206,ko:K19784,ko:K22393 ko00740,ko01100,map00740,map01100 ko00000,ko00001,ko01000 NADPH-dependent FMN reductase
PBONODFP_00399 1.27e-98 - - - K - - - Transcriptional regulator
PBONODFP_00400 2.31e-95 hsp1 - - O ko:K13993 ko04141,map04141 ko00000,ko00001,ko03110 Belongs to the small heat shock protein (HSP20) family
PBONODFP_00401 2.14e-39 - - - S - - - Protein of unknown function (DUF3021)
PBONODFP_00402 7.39e-87 - - - K - - - LytTr DNA-binding domain
PBONODFP_00403 5.38e-290 - - - EGP ko:K08161 - ko00000,ko02000 Transporter, major facilitator family protein
PBONODFP_00404 3.98e-68 - - - K - - - helix_turn_helix, Arsenical Resistance Operon Repressor
PBONODFP_00405 2.79e-274 yycB - - P ko:K03449 - ko00000,ko02000 Transporter, major facilitator family protein
PBONODFP_00407 1.34e-198 morA - - S - - - reductase
PBONODFP_00408 8.21e-213 - 1.1.1.65 - C ko:K05275 ko00750,ko01100,ko01120,map00750,map01100,map01120 ko00000,ko00001,ko01000 Aldo keto reductase
PBONODFP_00409 4.54e-105 - - - F - - - Nucleoside 2-deoxyribosyltransferase like
PBONODFP_00410 0.0 l1n 4.2.1.53 - S ko:K10254 - ko00000,ko01000 Myosin-crossreactive antigen
PBONODFP_00411 4.03e-132 - - - - - - - -
PBONODFP_00412 0.0 - - - - - - - -
PBONODFP_00413 7.26e-265 - - - C - - - Oxidoreductase
PBONODFP_00414 7.71e-192 cbiQ - - P ko:K16785 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 cobalt transport
PBONODFP_00415 0.0 ykoD - - P ko:K16786,ko:K16787 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ABC transporter, ATP-binding protein
PBONODFP_00416 2.57e-128 - - - S ko:K16924 - ko00000,ko00002,ko02000 UPF0397 protein
PBONODFP_00418 1.33e-167 - - - K ko:K03492 - ko00000,ko03000 UbiC transcription regulator-associated domain protein
PBONODFP_00419 4.14e-72 - - - K - - - Transcriptional regulator PadR-like family
PBONODFP_00420 3.14e-182 - - - - - - - -
PBONODFP_00421 7.44e-190 - - - - - - - -
PBONODFP_00422 3.37e-115 - - - - - - - -
PBONODFP_00423 7.14e-185 dhrS4 1.1.1.100 - IQ ko:K00059 ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 Oxidoreductase, short chain dehydrogenase reductase family protein
PBONODFP_00424 4.24e-218 ybhF_1 - - V ko:K01990 - ko00000,ko00002,ko02000 ABC transporter
PBONODFP_00425 0.0 - - - M ko:K01992 - ko00000,ko00002,ko02000 Exporter of polyketide antibiotics
PBONODFP_00426 1.09e-148 - - - K ko:K09017 - ko00000,ko03000 Transcriptional regulator
PBONODFP_00427 0.0 etfA 1.3.1.108 - C ko:K03522,ko:K22432 - ko00000,ko01000,ko04147 Electron transfer flavoprotein FAD-binding domain
PBONODFP_00428 2.04e-99 - - - T - - - ECF transporter, substrate-specific component
PBONODFP_00430 1.85e-121 XK27_02085 - - K - - - Bacterial regulatory proteins, tetR family
PBONODFP_00431 2.35e-243 dhaK2 2.7.1.28, 2.7.1.29, 4.6.1.15 - G ko:K00863 ko00051,ko00561,ko00680,ko01100,ko01120,ko01200,ko04622,map00051,map00561,map00680,map01100,map01120,map01200,map04622 ko00000,ko00001,ko00002,ko01000 Dak1 domain
PBONODFP_00432 3.88e-239 dhaK 2.7.1.121 - G ko:K05878 ko00561,ko01100,map00561,map01100 ko00000,ko00001,ko01000 Dak1 domain
PBONODFP_00433 2.75e-131 dhaL 2.7.1.121 - S ko:K05879 ko00561,ko01100,map00561,map01100 ko00000,ko00001,ko01000 Dak2
PBONODFP_00434 6.76e-75 dhaM 2.7.1.121 - S ko:K05881 ko00561,map00561 ko00000,ko00001,ko01000,ko02000 PTS system fructose IIA component
PBONODFP_00435 4e-172 glpF - - U ko:K02440 - ko00000,ko02000 Belongs to the MIP aquaporin (TC 1.A.8) family
PBONODFP_00436 2.65e-245 malR1 - - K ko:K02529 - ko00000,ko03000 Transcriptional regulator, LacI family
PBONODFP_00437 1.83e-231 yvdE - - K - - - helix_turn _helix lactose operon repressor
PBONODFP_00438 0.0 malA1 3.2.1.10, 3.2.1.20 GH13,GH31 G ko:K01182,ko:K01187 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 Alpha amylase, catalytic domain
PBONODFP_00439 4.69e-299 mdxE - - G ko:K02027,ko:K15770,ko:K17237 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Bacterial extracellular solute-binding protein
PBONODFP_00440 3.74e-302 malC - - P ko:K15771 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
PBONODFP_00441 2.83e-206 malD - - P ko:K15772 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter permease
PBONODFP_00442 1.01e-190 malA - - S - - - maltodextrose utilization protein MalA
PBONODFP_00443 0.0 malS 3.2.1.1 GH13 G ko:K01176 ko00500,ko01100,ko04973,map00500,map01100,map04973 ko00000,ko00001,ko01000 Glycogen debranching enzyme, glucanotransferase domain
PBONODFP_00444 2.44e-267 msmX - - P ko:K10112 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Belongs to the ABC transporter superfamily
PBONODFP_00445 0.0 mapA 2.4.1.8 GH65 G ko:K00691 ko00500,ko01100,map00500,map01100 ko00000,ko00001,ko01000 hydrolase, family 65, central catalytic
PBONODFP_00446 7.15e-304 - 3.2.1.96 - G ko:K01227 ko00511,map00511 ko00000,ko00001,ko01000 Glycosyl hydrolase family 85
PBONODFP_00447 2.45e-271 - 3.2.1.96 - G ko:K01227 ko00511,map00511 ko00000,ko00001,ko01000 Glycosyl hydrolase family 85
PBONODFP_00448 8.23e-61 ygbF - - S - - - Sugar efflux transporter for intercellular exchange
PBONODFP_00449 1.54e-216 scrK 2.7.1.4 - GK ko:K00847 ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100 ko00000,ko00001,ko01000 ROK family
PBONODFP_00450 0.0 melA 3.2.1.22 - G ko:K07407 ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603 ko00000,ko00001,ko01000 alpha-galactosidase
PBONODFP_00451 0.0 scrA 2.7.1.211 - G ko:K02808,ko:K02809,ko:K02810 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 phosphotransferase system
PBONODFP_00452 0.0 scrB 3.2.1.26 GH32 G ko:K01193 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 invertase
PBONODFP_00453 2.4e-230 scrR - - K ko:K02529,ko:K03484 - ko00000,ko03000 Transcriptional regulator, LacI family
PBONODFP_00454 0.0 - 3.2.1.10, 3.2.1.20 GH13,GH31 G ko:K01182,ko:K01187 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 Alpha amylase, catalytic domain protein
PBONODFP_00455 9.51e-210 - 1.1.1.1 - C ko:K00001 ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220 ko00000,ko00001,ko01000 nadph quinone reductase
PBONODFP_00456 1.29e-83 - - - - - - - -
PBONODFP_00457 2e-98 yugI - - J ko:K07570,ko:K07571 - ko00000 general stress protein
PBONODFP_00458 5.16e-141 ppiB 5.2.1.8 - G ko:K03768 - ko00000,ko01000,ko03110 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
PBONODFP_00459 7.18e-153 dedA - - S ko:K03975 - ko00000 SNARE-like domain protein
PBONODFP_00460 3.3e-151 - - - S - - - Protein of unknown function (DUF1461)
PBONODFP_00461 1.19e-187 nagD 3.1.3.41 - G ko:K01101 ko00627,ko01120,map00627,map01120 ko00000,ko00001,ko01000 Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
PBONODFP_00462 1.96e-116 yutD - - S - - - Protein of unknown function (DUF1027)
PBONODFP_00463 0.0 yunD 3.1.3.5 - F ko:K01081 ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110 ko00000,ko00001,ko01000 Belongs to the 5'-nucleotidase family
PBONODFP_00464 5.77e-151 - - - S - - - Calcineurin-like phosphoesterase
PBONODFP_00465 0.0 cycA - - E ko:K03293,ko:K11737 - ko00000,ko02000 Amino acid permease
PBONODFP_00466 3.31e-282 ackA 2.7.2.1 - F ko:K00925 ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PBONODFP_00467 1.56e-236 ytxK 2.1.1.72 - L ko:K00571 - ko00000,ko01000,ko02048 N-6 DNA Methylase
PBONODFP_00469 6.46e-113 - - - S - - - Prokaryotic N-terminal methylation motif
PBONODFP_00470 3.03e-27 - - - - ko:K02671 - ko00000,ko02035,ko02044 -
PBONODFP_00471 1.5e-108 - - - NU ko:K02246 - ko00000,ko00002,ko02044 general secretion pathway protein
PBONODFP_00472 9.71e-204 comGB - - NU ko:K02244 - ko00000,ko00002,ko02044 type II secretion system
PBONODFP_00473 1.55e-225 comGA - - NU ko:K02243 - ko00000,ko00002,ko02044 Type II IV secretion system protein
PBONODFP_00474 1.19e-204 rbsK 2.7.1.15 - H ko:K00852 ko00030,map00030 ko00000,ko00001,ko01000 Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PBONODFP_00475 2.21e-168 yebC - - K - - - Transcriptional regulatory protein
PBONODFP_00476 8.49e-66 - - - S ko:K09004 - ko00000 DsrE/DsrF-like family
PBONODFP_00477 9.2e-210 - - - G - - - Xylose isomerase domain protein TIM barrel
PBONODFP_00478 5.44e-232 ccpA - - K ko:K02529 - ko00000,ko03000 catabolite control protein A
PBONODFP_00479 1.55e-275 pepQ 3.4.13.9 - E ko:K01271 - ko00000,ko01000,ko01002 Creatinase/Prolidase N-terminal domain
PBONODFP_00480 9.11e-106 - - - K - - - helix_turn_helix, mercury resistance
PBONODFP_00481 4.51e-79 - - - - - - - -
PBONODFP_00482 1.88e-75 ytxG - - S - - - protein containing a divergent version of the methyl-accepting chemotaxis-like domain
PBONODFP_00483 2.31e-202 ykuT - - M ko:K16052,ko:K22044 - ko00000,ko02000 mechanosensitive ion channel
PBONODFP_00484 4.54e-287 hipO 3.5.1.47 - E ko:K05823 ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000,ko01002 Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
PBONODFP_00485 2.29e-112 dapH 2.3.1.117, 2.3.1.89 - E ko:K00674,ko:K05822 ko00300,ko01100,ko01110,ko01120,ko01230,map00300,map01100,map01110,map01120,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
PBONODFP_00486 6.53e-113 ykuL - - S - - - (CBS) domain
PBONODFP_00487 4.03e-125 ysnB - - S ko:K07095 - ko00000 Phosphoesterase
PBONODFP_00488 8.49e-144 rdgB 3.6.1.66 - F ko:K02428 ko00230,map00230 ko00000,ko00001,ko01000 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
PBONODFP_00489 8.74e-195 murI 3.6.1.66, 5.1.1.3 - M ko:K01776,ko:K02428 ko00230,ko00471,ko01100,map00230,map00471,map01100 ko00000,ko00001,ko01000,ko01011 Provides the (R)-glutamate required for cell wall biosynthesis
PBONODFP_00490 1.45e-161 yslB - - S - - - Protein of unknown function (DUF2507)
PBONODFP_00491 3e-69 trxA - - O ko:K03671 ko04621,ko05418,map04621,map05418 ko00000,ko00001,ko03110 Belongs to the thioredoxin family
PBONODFP_00492 0.0 mutS2 - - L ko:K07456 ko03430,map03430 ko00000,ko00001,ko03400 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
PBONODFP_00493 1.06e-49 - - - D ko:K09888 - ko00000,ko03036 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
PBONODFP_00494 1.31e-63 yrzB - - S - - - Belongs to the UPF0473 family
PBONODFP_00495 5.39e-96 yrrK - - J ko:K07447 - ko00000,ko01000 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
PBONODFP_00496 5e-57 yrzL - - S - - - Belongs to the UPF0297 family
PBONODFP_00497 0.0 alaS 6.1.1.7 - J ko:K01872 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
PBONODFP_00498 2.79e-316 cshB 3.6.4.13 - JKL ko:K05592,ko:K18692 ko03018,map03018 ko00000,ko00001,ko01000,ko03009,ko03019 DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
PBONODFP_00499 8.32e-227 nrnA 3.1.13.3, 3.1.3.7 - S ko:K06881 ko00920,ko01100,ko01120,map00920,map01100,map01120 ko00000,ko00001,ko01000,ko03400 DHHA1 domain protein
PBONODFP_00500 2.48e-276 dinB 2.7.7.7 - L ko:K02346 - ko00000,ko01000,ko03400 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
PBONODFP_00501 1.32e-63 yajC - - U ko:K03210 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Preprotein translocase
PBONODFP_00502 9.91e-289 tgt 2.4.2.29 - F ko:K00773 - ko00000,ko01000,ko03016 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
PBONODFP_00503 5.87e-256 queA 2.4.99.17 - J ko:K07568 - ko00000,ko01000,ko03016 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
PBONODFP_00504 2.62e-239 ruvB 3.6.4.12 - L ko:K03551 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
PBONODFP_00505 2.83e-138 ruvA 3.6.4.12 - L ko:K03550 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
PBONODFP_00506 2.07e-118 - - - - - - - -
PBONODFP_00507 0.0 yfhO - - S - - - Bacterial membrane protein YfhO
PBONODFP_00508 1.35e-93 - - - - - - - -
PBONODFP_00509 0.0 mutL - - L ko:K03572 ko03430,map03430 ko00000,ko00001,ko03400 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
PBONODFP_00510 0.0 mutS - - L ko:K03555 ko03430,map03430 ko00000,ko00001,ko03400 that it carries out the mismatch recognition step. This protein has a weak ATPase activity
PBONODFP_00511 6.18e-197 ymdB - - S ko:K02029,ko:K02030,ko:K09769 - ko00000,ko00002,ko02000 YmdB-like protein
PBONODFP_00512 6.57e-291 rny - - S ko:K18682 ko03018,map03018 ko00000,ko00001,ko01000,ko03019 Endoribonuclease that initiates mRNA decay
PBONODFP_00513 9.9e-264 recA - - L ko:K03553 ko03440,map03440 ko00000,ko00001,ko00002,ko03400 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
PBONODFP_00514 2.21e-294 cinA 3.5.1.42 - S ko:K03742,ko:K03743 ko00760,map00760 ko00000,ko00001,ko01000 Belongs to the CinA family
PBONODFP_00515 1.38e-221 - - - L ko:K07487 - ko00000 Transposase
PBONODFP_00516 2.09e-85 - - - - - - - -
PBONODFP_00517 9.2e-317 celD - - G ko:K02761 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko02000 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PBONODFP_00518 0.0 bglA 3.2.1.86 GT1 G ko:K01223 ko00010,ko00500,map00010,map00500 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 1 family
PBONODFP_00519 1.9e-148 - - - K ko:K03489 - ko00000,ko03000 UTRA
PBONODFP_00520 9.82e-111 dps - - P ko:K04047 - ko00000,ko03036 Belongs to the Dps family
PBONODFP_00522 0.0 - - - S - - - MucBP domain
PBONODFP_00524 4.54e-202 - 3.6.1.22 - L ko:K03426 ko00760,ko01100,ko04146,map00760,map01100,map04146 ko00000,ko00001,ko01000 NADH pyrophosphatase zinc ribbon domain
PBONODFP_00525 0.0 nhaP4 - - P ko:K03316 - ko00000 Sodium proton antiporter
PBONODFP_00526 0.0 lepA2 - - M ko:K03596 ko05134,map05134 ko00000,ko00001 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
PBONODFP_00527 1.97e-151 - - - K - - - Bacterial regulatory proteins, tetR family
PBONODFP_00528 2.83e-267 - - - NU - - - Mycoplasma protein of unknown function, DUF285
PBONODFP_00529 1.1e-115 - - - S - - - WxL domain surface cell wall-binding
PBONODFP_00530 4.28e-233 - - - S - - - Bacterial protein of unknown function (DUF916)
PBONODFP_00531 0.0 - - - M - - - LPXTG-motif cell wall anchor domain protein
PBONODFP_00532 3.86e-85 - - - K - - - helix_turn_helix, mercury resistance
PBONODFP_00533 1.5e-193 - - - IQ - - - Enoyl-(Acyl carrier protein) reductase
PBONODFP_00534 4.01e-96 - 2.3.1.79 - S ko:K00661 - ko00000,ko01000 transferase hexapeptide repeat
PBONODFP_00535 2.47e-168 - - - S - - - Belongs to the short-chain dehydrogenases reductases (SDR) family
PBONODFP_00536 3.89e-210 - - - GM - - - NmrA-like family
PBONODFP_00537 3.74e-120 - - - K - - - Bacterial regulatory proteins, tetR family
PBONODFP_00538 3.32e-219 fhuG - - U ko:K02015 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PBONODFP_00539 1.49e-227 fhuB - - U ko:K02015 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PBONODFP_00540 6.37e-188 fhuC 3.6.3.34 - HP ko:K02013 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ABC transporter
PBONODFP_00541 1.42e-218 fhuD - - P ko:K02016 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Periplasmic binding protein
PBONODFP_00542 2.64e-141 - - - K - - - Bacterial regulatory proteins, tetR family
PBONODFP_00543 0.0 yfjF - - U - - - Sugar (and other) transporter
PBONODFP_00546 1.97e-229 ydhF - - S - - - Aldo keto reductase
PBONODFP_00547 1.09e-130 - - - S - - - Protein of unknown function (DUF1211)
PBONODFP_00548 3.47e-244 - 1.1.1.219 - GM ko:K00091 - ko00000,ko01000 Male sterility protein
PBONODFP_00549 2.46e-127 - - - K - - - Bacterial regulatory proteins, tetR family
PBONODFP_00550 3.27e-170 - - - S - - - KR domain
PBONODFP_00551 1.27e-83 - - - K - - - HxlR-like helix-turn-helix
PBONODFP_00552 1.62e-62 - - - S - - - Domain of unknown function (DUF1905)
PBONODFP_00553 0.0 - - - M - - - Glycosyl hydrolases family 25
PBONODFP_00554 0.0 gabD 1.2.1.16, 1.2.1.20, 1.2.1.79 - C ko:K00135 ko00250,ko00310,ko00350,ko00650,ko00760,ko01100,ko01120,map00250,map00310,map00350,map00650,map00760,map01100,map01120 ko00000,ko00001,ko00002,ko01000 Belongs to the aldehyde dehydrogenase family
PBONODFP_00555 2.65e-216 - - - GM - - - NmrA-like family
PBONODFP_00556 4.56e-130 - - - K - - - Bacterial regulatory proteins, tetR family
PBONODFP_00557 1.77e-282 blpH 2.7.13.3 - T ko:K07706 ko02020,ko02024,map02020,map02024 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 GHKL domain
PBONODFP_00558 1.38e-174 - - - K ko:K07707 ko02020,ko02024,map02020,map02024 ko00000,ko00001,ko00002,ko02022 LytTr DNA-binding domain
PBONODFP_00559 0.0 asnB 6.3.5.4 - E ko:K01953 ko00250,ko01100,ko01110,map00250,map01100,map01110 ko00000,ko00001,ko01000,ko01002 Asparagine synthase
PBONODFP_00560 4.52e-147 - - - M - - - ErfK YbiS YcfS YnhG
PBONODFP_00561 1.65e-199 - - - EGP - - - Major Facilitator
PBONODFP_00562 5.78e-147 cps4G - - M - - - Glycosyltransferase Family 4
PBONODFP_00563 1.01e-292 - - - - - - - -
PBONODFP_00564 2.39e-228 cps4I - - M - - - Glycosyltransferase like family 2
PBONODFP_00565 0.0 cps4J - - S - - - MatE
PBONODFP_00566 0.0 - 3.1.4.53 - S ko:K03651 ko00230,ko02025,map00230,map02025 ko00000,ko00001,ko01000 Calcineurin-like phosphoesterase
PBONODFP_00567 0.0 fruA 2.7.1.202 - GT ko:K02768,ko:K02769,ko:K02770 ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 Phosphotransferase System
PBONODFP_00568 1.73e-217 pfkB 2.7.1.56 - H ko:K00882 ko00051,map00051 ko00000,ko00001,ko01000 Belongs to the carbohydrate kinase PfkB family. LacC subfamily
PBONODFP_00569 3.02e-175 fruR - - K ko:K03436 - ko00000,ko03000 DeoR C terminal sensor domain
PBONODFP_00570 1.55e-311 obg - - S ko:K03979 - ko00000,ko01000,ko03009 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
PBONODFP_00571 6.62e-62 - - - - - - - -
PBONODFP_00572 2.05e-228 rnz 3.1.26.11 - J ko:K00784 ko03013,map03013 ko00000,ko00001,ko01000,ko03016 Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
PBONODFP_00573 7.09e-180 - - - S ko:K07124 - ko00000 Belongs to the short-chain dehydrogenases reductases (SDR) family
PBONODFP_00574 1.84e-67 - - - S - - - Lipopolysaccharide assembly protein A domain
PBONODFP_00575 0.0 recJ - - L ko:K07462 ko03410,ko03430,ko03440,map03410,map03430,map03440 ko00000,ko00001,ko01000,ko03400 Single-stranded-DNA-specific exonuclease RecJ
PBONODFP_00576 1.52e-120 apt 2.4.2.7 - F ko:K00759 ko00230,ko01100,map00230,map01100 ko00000,ko00001,ko01000,ko04147 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
PBONODFP_00577 1.31e-134 - - - K - - - Helix-turn-helix domain
PBONODFP_00578 2.35e-269 - - - EGP - - - Major facilitator Superfamily
PBONODFP_00579 2.84e-75 ybjQ - - S - - - Belongs to the UPF0145 family
PBONODFP_00580 4.15e-183 - - - Q - - - Methyltransferase
PBONODFP_00581 1.75e-43 - - - - - - - -
PBONODFP_00583 1.38e-293 rodA - - D ko:K05837 - ko00000,ko03036 Cell cycle protein
PBONODFP_00584 0.0 - - - P ko:K02050 - ko00000,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
PBONODFP_00585 1.1e-183 - - - P ko:K02049 - ko00000,ko00002,ko02000 ATPases associated with a variety of cellular activities
PBONODFP_00586 1.56e-281 ywtF_2 - - K - - - Cell envelope-related transcriptional attenuator domain
PBONODFP_00587 6.27e-131 - - - L - - - Helix-turn-helix domain
PBONODFP_00588 2.3e-226 csbB - GT2 M ko:K20534 - ko00000,ko01000,ko01005,ko02000 Glycosyltransferase like family 2
PBONODFP_00589 1.09e-86 - - - - - - - -
PBONODFP_00590 1.94e-97 - - - - - - - -
PBONODFP_00591 1.1e-276 mvaS 2.3.3.10 - I ko:K01641 ko00072,ko00280,ko00650,ko00900,ko01100,ko01110,ko01130,map00072,map00280,map00650,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Hydroxymethylglutaryl-CoA synthase
PBONODFP_00592 6.4e-122 - - - - - - - -
PBONODFP_00593 7.22e-149 lexA 3.4.21.88 - K ko:K01356 - ko00000,ko00002,ko01000,ko01002,ko03400 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
PBONODFP_00594 7.68e-48 ynzC - - S - - - UPF0291 protein
PBONODFP_00595 3.96e-44 XK26_06720 - - S ko:K09976 - ko00000 Uncharacterised protein family (UPF0154)
PBONODFP_00596 8.8e-155 plsC 2.3.1.51 - I ko:K00655 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko01004 Acyltransferase
PBONODFP_00597 3.4e-177 yabB 2.1.1.223 - L ko:K07461,ko:K15460 - ko00000,ko01000,ko03016 Methyltransferase small domain
PBONODFP_00598 1.02e-66 yazA - - L ko:K07461 - ko00000 GIY-YIG catalytic domain protein
PBONODFP_00599 1.92e-239 ldhD 1.1.1.28 - CH ko:K03778 ko00620,ko01120,map00620,map01120 ko00000,ko00001,ko01000 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PBONODFP_00600 2.92e-172 - - - S ko:K07025 - ko00000 Haloacid dehalogenase-like hydrolase
PBONODFP_00601 6.33e-185 rpsB - - J ko:K02967 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the universal ribosomal protein uS2 family
PBONODFP_00602 2.67e-194 tsf - - J ko:K02357 - ko00000,ko03012,ko03029 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
PBONODFP_00603 3.01e-165 pyrH 2.7.4.22 - F ko:K09903 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko01000 Catalyzes the reversible phosphorylation of UMP to UDP
PBONODFP_00604 9.83e-113 frr - - J ko:K02838 - ko00000,ko03012 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
PBONODFP_00605 3.17e-190 uppS 2.5.1.31 - H ko:K00806 ko00900,ko01110,map00900,map01110 ko00000,ko00001,ko01000,ko01006 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
PBONODFP_00606 1.13e-175 cdsA 2.7.7.41 - I ko:K00981 ko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070 ko00000,ko00001,ko00002,ko01000 Belongs to the CDS family
PBONODFP_00607 4.64e-294 rseP - - M ko:K11749 ko02024,ko04112,map02024,map04112 ko00000,ko00001,ko01000,ko01002 zinc metalloprotease
PBONODFP_00608 0.0 proS 6.1.1.15 - J ko:K01881 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
PBONODFP_00609 0.0 polC 2.7.7.7 - L ko:K03763 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PBONODFP_00610 9.74e-108 rimP - - J ko:K09748 - ko00000,ko03009 Required for maturation of 30S ribosomal subunits
PBONODFP_00611 4.46e-275 nusA - - K ko:K02600 - ko00000,ko03009,ko03021 Participates in both transcription termination and antitermination
PBONODFP_00612 2.95e-65 ylxR - - K ko:K07742 - ko00000 Protein of unknown function (DUF448)
PBONODFP_00613 3.28e-63 ylxQ - - J - - - ribosomal protein
PBONODFP_00615 3.28e-223 - - - L ko:K07478 - ko00000 AAA C-terminal domain
PBONODFP_00616 2.76e-74 - - - - - - - -
PBONODFP_00617 6.88e-73 rplT - - J ko:K02887 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
PBONODFP_00618 6.92e-37 rpmI - - J ko:K02916 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL35 family
PBONODFP_00619 2.37e-109 infC - - J ko:K02520 - ko00000,ko03012,ko03029 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
PBONODFP_00620 0.0 thrS 6.1.1.3 - J ko:K01868 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
PBONODFP_00621 1.91e-143 dnaI - - L ko:K11144 - ko00000,ko03032 Primosomal protein DnaI
PBONODFP_00622 3.62e-123 dnaB - - L ko:K03346 - ko00000,ko03032 replication initiation and membrane attachment
PBONODFP_00623 1.58e-117 nrdR - - K ko:K07738 - ko00000,ko03000 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
PBONODFP_00624 1.92e-133 coaE 2.7.1.24 - F ko:K00859 ko00770,ko01100,map00770,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
PBONODFP_00625 1.85e-201 fpg 3.2.2.23, 4.2.99.18 - L ko:K10563 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
PBONODFP_00626 0.0 polA 2.7.7.7 - L ko:K02335 ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440 ko00000,ko00001,ko01000,ko03032,ko03400 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
PBONODFP_00627 3.46e-154 ybhL - - S ko:K06890 - ko00000 Belongs to the BI1 family
PBONODFP_00628 4.45e-58 - - - S - - - Phage minor structural protein GP20
PBONODFP_00630 5.12e-46 - - - S - - - Phage Mu protein F like protein
PBONODFP_00632 1.8e-96 - - - - - - - -
PBONODFP_00633 8.63e-226 - - - - - - - -
PBONODFP_00634 2.69e-158 narI 1.7.5.1 - C ko:K00374 ko00910,ko01120,ko02020,map00910,map01120,map02020 ko00000,ko00001,ko00002,ko01000 Nitrate reductase
PBONODFP_00635 8.2e-127 narJ - - C ko:K00373 ko02020,map02020 ko00000,ko00001 Nitrate reductase delta subunit
PBONODFP_00636 0.0 narH 1.7.5.1 - C ko:K00371 ko00910,ko01120,ko02020,map00910,map01120,map02020 ko00000,ko00001,ko00002,ko01000 4Fe-4S dicluster domain
PBONODFP_00637 0.0 narZ 1.7.5.1 - C ko:K00370 ko00910,ko01120,ko02020,map00910,map01120,map02020 ko00000,ko00001,ko00002,ko01000 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
PBONODFP_00638 1.27e-250 moeB 2.7.7.80 - H ko:K21029 ko04122,map04122 ko00000,ko00001,ko01000 ThiF family
PBONODFP_00639 9.07e-107 moaB 2.7.7.75 - H ko:K03638 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko01000 May be involved in the biosynthesis of molybdopterin
PBONODFP_00640 5.2e-294 moeA 2.10.1.1 - H ko:K03750 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko01000 MoeA N-terminal region (domain I and II)
PBONODFP_00641 9.62e-116 mobB - - H ko:K03753 - ko00000 molybdopterin-guanine dinucleotide biosynthesis protein
PBONODFP_00642 1.08e-111 moaC 4.6.1.17 - H ko:K03637 ko00790,ko01100,ko04122,map00790,map01100,map04122 ko00000,ko00001,ko01000 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP)
PBONODFP_00643 5.73e-129 mobA 2.7.7.77 - H ko:K03752 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko01000 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor
PBONODFP_00644 8.84e-52 - - - - - - - -
PBONODFP_00645 1.48e-98 - 2.7.13.3 - T ko:K07683,ko:K10851 ko02020,map02020 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 phosphoenolpyruvate-protein phosphotransferase activity
PBONODFP_00646 8.17e-242 nreB 2.7.13.3 - F ko:K07683 ko02020,map02020 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Sensor histidine kinase
PBONODFP_00647 7.76e-152 nreC - - K ko:K07696 ko02020,map02020 ko00000,ko00001,ko00002,ko02022 PFAM regulatory protein LuxR
PBONODFP_00648 6.1e-64 - - - - - - - -
PBONODFP_00649 4.32e-233 - - - - - - - -
PBONODFP_00650 4.87e-205 - - - H - - - geranyltranstransferase activity
PBONODFP_00651 7.79e-203 - - - K ko:K20480 ko02024,map02024 ko00000,ko00001,ko03000 Helix-turn-helix
PBONODFP_00652 4.08e-78 - - - S - - - Iron-sulfur cluster assembly protein
PBONODFP_00653 1.98e-278 narK - - P ko:K02575 ko00910,map00910 ko00000,ko00001,ko00002,ko02000 Transporter, major facilitator family protein
PBONODFP_00654 3.92e-248 moaA 4.1.99.22 - H ko:K03639 ko00790,ko01100,ko04122,map00790,map01100,map04122 ko00000,ko00001,ko01000 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
PBONODFP_00655 7.86e-46 moaD - - H ko:K03636 ko04122,map04122 ko00000,ko00001 ThiS family
PBONODFP_00656 6.26e-92 moaE 2.8.1.12 - H ko:K03635,ko:K21142 ko00790,ko01100,ko04122,map00790,map01100,map04122 ko00000,ko00001,ko01000 MoaE protein
PBONODFP_00657 6.7e-107 - - - C - - - Flavodoxin
PBONODFP_00658 6.56e-211 fecD - - P ko:K02015 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PBONODFP_00659 1.15e-161 fecE 3.6.3.34 - HP ko:K02013 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 AAA domain, putative AbiEii toxin, Type IV TA system
PBONODFP_00660 6.87e-236 fecB - - P ko:K02016 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Periplasmic binding protein
PBONODFP_00661 0.0 sufB - - O ko:K07033,ko:K09014 - ko00000 assembly protein SufB
PBONODFP_00662 2.71e-108 nifU - - C ko:K04488 - ko00000 SUF system FeS assembly protein, NifU family
PBONODFP_00663 6.39e-299 sufS 2.8.1.7, 4.4.1.16 - E ko:K11717 ko00450,ko01100,map00450,map01100 ko00000,ko00001,ko01000 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
PBONODFP_00664 5.21e-311 sufD - - O ko:K07033,ko:K09015 - ko00000 FeS assembly protein SufD
PBONODFP_00665 1.1e-184 sufC - - O ko:K09013 - ko00000,ko02000 FeS assembly ATPase SufC
PBONODFP_00666 2.87e-47 feoA - - P ko:K04758 - ko00000,ko02000 FeoA domain
PBONODFP_00667 0.0 feoB - - P ko:K04759 - ko00000,ko02000 transporter of a GTP-driven Fe(2 ) uptake system
PBONODFP_00668 3.04e-29 - - - S - - - Virus attachment protein p12 family
PBONODFP_00669 0.0 murC 6.3.2.8 - M ko:K01924 ko00471,ko00550,ko01100,map00471,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Belongs to the MurCDEF family
PBONODFP_00670 0.0 sftA - - D ko:K03466 - ko00000,ko03036 Belongs to the FtsK SpoIIIE SftA family
PBONODFP_00671 1.49e-121 - - - K - - - transcriptional regulator
PBONODFP_00672 0.0 - - - EGP - - - Major Facilitator
PBONODFP_00673 1.14e-193 - - - O - - - Band 7 protein
PBONODFP_00674 1.73e-113 - - - S - - - Protein of unknown function with HXXEE motif
PBONODFP_00675 2.19e-07 - - - K - - - transcriptional regulator
PBONODFP_00676 1.48e-71 - - - - - - - -
PBONODFP_00677 2.02e-39 - - - - - - - -
PBONODFP_00678 8e-275 cfa 2.1.1.79 - M ko:K00574 - ko00000,ko01000 cyclopropane-fatty-acyl-phospholipid synthase
PBONODFP_00679 9.96e-147 - 1.14.99.53 AA10 S ko:K21713 - ko00000,ko01000 Lytic polysaccharide mono-oxygenase, cellulose-degrading
PBONODFP_00680 5.93e-60 ycnE - - S - - - Antibiotic biosynthesis monooxygenase
PBONODFP_00681 2.05e-55 - - - - - - - -
PBONODFP_00682 6.05e-108 tspO - - T ko:K05770 ko04080,ko04214,ko04979,ko05166,map04080,map04214,map04979,map05166 ko00000,ko00001,ko02000 TspO/MBR family
PBONODFP_00683 5.28e-100 - - - T - - - Belongs to the universal stress protein A family
PBONODFP_00684 3.92e-87 - - - S - - - Protein of unknown function (DUF805)
PBONODFP_00685 7.27e-211 - - - I - - - Diacylglycerol kinase catalytic domain
PBONODFP_00686 1.51e-48 - - - - - - - -
PBONODFP_00687 5.79e-21 - - - - - - - -
PBONODFP_00688 2.22e-55 - - - S - - - transglycosylase associated protein
PBONODFP_00689 4e-40 - - - S - - - CsbD-like
PBONODFP_00690 1.06e-53 - - - - - - - -
PBONODFP_00691 0.0 pepD4 - - E ko:K08659 - ko00000,ko01000,ko01002 Dipeptidase
PBONODFP_00692 4.87e-37 dmpI 5.3.2.6 - G ko:K01821 ko00362,ko00621,ko00622,ko01100,ko01120,ko01220,map00362,map00621,map00622,map01100,map01120,map01220 ko00000,ko00001,ko00002,ko01000 Belongs to the 4-oxalocrotonate tautomerase family
PBONODFP_00693 0.0 lysA 4.1.1.20 - E ko:K01586 ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
PBONODFP_00694 1.04e-218 - 2.5.1.74 - H ko:K02548 ko00130,ko01100,ko01110,map00130,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko01006 UbiA prenyltransferase family
PBONODFP_00695 5.03e-182 - - - U ko:K10716 - ko00000,ko02000 Ion channel
PBONODFP_00696 1.25e-66 - - - - - - - -
PBONODFP_00697 3.23e-58 - - - - - - - -
PBONODFP_00698 0.0 gabT 2.6.1.19, 5.1.1.21 - E ko:K00823,ko:K20708 ko00250,ko00410,ko00640,ko00650,ko01100,ko01120,map00250,map00410,map00640,map00650,map01100,map01120 ko00000,ko00001,ko00002,ko01000,ko01007 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
PBONODFP_00699 0.0 - - - E ko:K03294 - ko00000 Amino Acid
PBONODFP_00700 3.86e-192 yitU 3.1.3.104 - S ko:K21064 ko00740,ko01100,ko01110,map00740,map01100,map01110 ko00000,ko00001,ko00002,ko01000 hydrolase
PBONODFP_00701 0.0 rsmF - - J - - - NOL1 NOP2 sun family protein
PBONODFP_00702 2.18e-146 - - - S - - - Domain of unknown function (DUF4767)
PBONODFP_00703 0.0 malT - - G ko:K16211 - ko00000,ko02000 Major Facilitator
PBONODFP_00704 0.0 mapA 2.4.1.8 GH65 G ko:K00691 ko00500,ko01100,map00500,map01100 ko00000,ko00001,ko01000 hydrolase, family 65, central catalytic
PBONODFP_00705 1.31e-244 galM2 5.1.3.3 - G ko:K01785 ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the interconversion of alpha and beta anomers of maltose
PBONODFP_00706 4.98e-250 fni 5.3.3.2 - C ko:K01823 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
PBONODFP_00707 1.77e-262 mvaK2 2.7.4.2 - I ko:K00938 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 phosphomevalonate kinase
PBONODFP_00708 1.1e-230 mvaD 4.1.1.33 - I ko:K01597 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 diphosphomevalonate decarboxylase
PBONODFP_00709 1.48e-217 mvk 2.7.1.36 - I ko:K00869 ko00900,ko01100,ko01110,ko01130,ko04146,map00900,map01100,map01110,map01130,map04146 ko00000,ko00001,ko00002,ko01000 mevalonate kinase
PBONODFP_00710 0.0 dinG 3.6.4.12 - L ko:K03722 - ko00000,ko01000,ko03400 helicase involved in DNA repair and perhaps also replication
PBONODFP_00711 1.46e-106 ypmB - - S - - - protein conserved in bacteria
PBONODFP_00712 3.1e-289 aspB 2.6.1.1, 2.6.1.14 - E ko:K00812,ko:K22457 ko00220,ko00250,ko00270,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko01000,ko01007 Aminotransferase
PBONODFP_00713 0.0 asnS 6.1.1.22 - J ko:K01893 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Asparaginyl-tRNA synthetase
PBONODFP_00714 1.13e-165 dnaD - - L ko:K02086 - ko00000 Replication initiation and membrane attachment
PBONODFP_00716 7.74e-237 metN - - P ko:K02071 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
PBONODFP_00717 2.45e-142 metI - - P ko:K02072 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter permease
PBONODFP_00718 1.3e-202 metQ1 - - P ko:K02073 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Belongs to the nlpA lipoprotein family
PBONODFP_00719 5.32e-109 - - - T - - - Universal stress protein family
PBONODFP_00720 0.0 ftpA - - P ko:K02011 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
PBONODFP_00721 3.28e-233 ftpB - - P ko:K02012 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Bacterial extracellular solute-binding protein
PBONODFP_00722 3.98e-229 phnT 3.6.3.30 - P ko:K02010 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ATPases associated with a variety of cellular activities
PBONODFP_00723 0.0 ponA 2.4.1.129, 3.4.16.4 GT51 M ko:K05366 ko00550,ko01100,ko01501,map00550,map01100,map01501 ko00000,ko00001,ko01000,ko01003,ko01011 penicillin-binding protein 1A
PBONODFP_00724 3.6e-152 recU - - L ko:K03700 - ko00000,ko03400 Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
PBONODFP_00725 2.12e-142 ypsA - - S - - - Belongs to the UPF0398 family
PBONODFP_00726 9.98e-75 gpsB - - D - - - Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
PBONODFP_00728 4.11e-282 ypsC - - L ko:K07444 - ko00000,ko01000 Belongs to the methyltransferase superfamily
PBONODFP_00730 4.17e-186 yitV - - S ko:K06889 - ko00000 COG1073 Hydrolases of the alpha beta superfamily
PBONODFP_00731 7.86e-96 - - - S - - - SnoaL-like domain
PBONODFP_00732 3.2e-254 - - - M - - - Glycosyltransferase, group 2 family protein
PBONODFP_00733 1.65e-265 mccF - - V - - - LD-carboxypeptidase
PBONODFP_00734 1.66e-101 - - - K - - - Acetyltransferase (GNAT) domain
PBONODFP_00735 2.13e-312 - - - M ko:K07273 - ko00000 hydrolase, family 25
PBONODFP_00736 1.44e-234 - - - V - - - LD-carboxypeptidase
PBONODFP_00737 1.99e-159 - - - - ko:K01992 - ko00000,ko00002,ko02000 -
PBONODFP_00738 3.99e-158 - - - P ko:K01990 - ko00000,ko00002,ko02000 ATPases associated with a variety of cellular activities
PBONODFP_00739 1.6e-247 - - - - - - - -
PBONODFP_00740 1.5e-186 - - - S - - - hydrolase activity, acting on ester bonds
PBONODFP_00741 1.47e-268 yurR 1.4.5.1 - E ko:K00285 ko00360,map00360 ko00000,ko00001,ko01000 FAD dependent oxidoreductase
PBONODFP_00742 3.28e-87 rnhA 3.1.26.4 - L ko:K03469 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 Ribonuclease HI
PBONODFP_00743 5.04e-82 esbA - - S - - - Family of unknown function (DUF5322)
PBONODFP_00744 0.0 fhs 6.3.4.3 - F ko:K01938 ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Belongs to the formate--tetrahydrofolate ligase family
PBONODFP_00745 1.65e-97 lspA 3.4.23.36 - MU ko:K03101 ko03060,map03060 ko00000,ko00001,ko01000,ko01002 This protein specifically catalyzes the removal of signal peptides from prolipoproteins
PBONODFP_00746 9.72e-225 rluD 5.4.99.23 - J ko:K06180 - ko00000,ko01000,ko03009 Responsible for synthesis of pseudouridine from uracil
PBONODFP_00747 1.9e-115 pyrR 2.4.2.9 - F ko:K02825 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko01000,ko03000 Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
PBONODFP_00748 4.89e-263 carA 6.3.5.5 - F ko:K01956 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the CarA family
PBONODFP_00749 0.0 carB 6.3.5.5 - F ko:K01955 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Carbamoyl-phosphate synthase
PBONODFP_00750 0.0 - - - S - - - Bacterial membrane protein, YfhO
PBONODFP_00751 2.01e-145 - - - G - - - Phosphoglycerate mutase family
PBONODFP_00752 6.38e-92 frataxin - - S ko:K05937 - ko00000 Domain of unknown function (DU1801)
PBONODFP_00754 2.24e-167 cat 2.3.1.28 - V ko:K19271 - br01600,ko00000,ko01000,ko01504 Chloramphenicol acetyltransferase
PBONODFP_00755 9.93e-91 - - - S - - - LuxR family transcriptional regulator
PBONODFP_00756 1.19e-176 - - - S - - - Uncharacterized protein conserved in bacteria (DUF2087)
PBONODFP_00757 1.87e-117 - - - F - - - NUDIX domain
PBONODFP_00758 2.52e-207 - - - V ko:K01990 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
PBONODFP_00759 9.28e-171 - - - S ko:K01992 - ko00000,ko00002,ko02000 ABC-2 family transporter protein
PBONODFP_00760 0.0 FbpA - - K - - - Fibronectin-binding protein
PBONODFP_00761 1.97e-87 - - - K - - - Transcriptional regulator
PBONODFP_00762 1.11e-205 - - - S - - - EDD domain protein, DegV family
PBONODFP_00763 2.47e-101 yjcF 3.5.4.33, 4.4.1.8 - K ko:K02348,ko:K11991,ko:K14155 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 ko00000,ko00001,ko01000,ko01007,ko03016 protein acetylation
PBONODFP_00764 2.9e-170 - - - S - - - Protein of unknown function (DUF975)
PBONODFP_00765 2.38e-39 - - - - - - - -
PBONODFP_00766 1.23e-63 - - - - - - - -
PBONODFP_00767 2.32e-189 - - - C - - - Domain of unknown function (DUF4931)
PBONODFP_00768 4.93e-267 pmrB - - EGP - - - Major Facilitator Superfamily
PBONODFP_00770 1.33e-67 XK27_08430 - - S - - - Staphylococcal protein of unknown function (DUF960)
PBONODFP_00771 9.3e-167 yejC - - S - - - Protein of unknown function (DUF1003)
PBONODFP_00772 2.59e-177 XK27_00890 - - S ko:K08974 - ko00000 Domain of unknown function (DUF368)
PBONODFP_00773 1.23e-311 aapA - - E ko:K03293,ko:K11737 - ko00000,ko02000 Amino acid permease
PBONODFP_00774 1.85e-174 - - - - - - - -
PBONODFP_00775 7.79e-78 - - - - - - - -
PBONODFP_00776 0.0 lctP - - C ko:K03303 - ko00000,ko02000 L-lactate permease
PBONODFP_00777 1.12e-288 - - - - - - - -
PBONODFP_00778 7.15e-165 tarI 2.7.7.40, 2.7.7.60 - I ko:K00991,ko:K21030 ko00040,ko00900,ko01100,ko01110,ko01130,map00040,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of the cytidylyl group of CTP to D-ribitol 5-phosphate
PBONODFP_00779 1.47e-243 tarJ 1.1.1.137, 1.1.1.405 - E ko:K05352,ko:K21680 ko00040,ko01100,map00040,map01100 ko00000,ko00001,ko01000 Catalyzes the NADPH dependent reduction of D-ribulose 5- phosphate to D-ribitol 5-phosphate
PBONODFP_00780 1.66e-249 tarK 2.7.8.14, 2.7.8.46, 2.7.8.47 - H ko:K18704,ko:K21592 - ko00000,ko01000 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
PBONODFP_00781 0.0 tarL 2.7.8.14, 2.7.8.47 - H ko:K18704 - ko00000,ko01000 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
PBONODFP_00782 2.23e-119 paiA 2.3.1.57 - K ko:K22441 - ko00000,ko01000 Acetyltransferase (GNAT) domain
PBONODFP_00783 1.6e-93 - - - K - - - helix_turn_helix multiple antibiotic resistance protein
PBONODFP_00784 7.91e-305 gshR1 1.8.1.7 - C ko:K00383 ko00480,ko04918,map00480,map04918 ko00000,ko00001,ko01000 Glutathione reductase
PBONODFP_00785 3.81e-64 - - - - - - - -
PBONODFP_00786 4.8e-310 - - - M - - - Glycosyl transferase family group 2
PBONODFP_00787 0.0 - - - M - - - 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
PBONODFP_00788 2.08e-203 - - - L - - - Phage integrase, N-terminal SAM-like domain
PBONODFP_00789 1.07e-43 - - - S - - - YozE SAM-like fold
PBONODFP_00790 9.17e-126 msrA 1.8.4.11, 1.8.4.12 - O ko:K07304,ko:K12267 - ko00000,ko01000 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PBONODFP_00791 3.8e-105 msrB 1.8.4.12 - O ko:K07305 - ko00000,ko01000 peptide methionine sulfoxide reductase
PBONODFP_00792 3.91e-216 ppaC 3.6.1.1 - C ko:K15986 ko00190,map00190 ko00000,ko00001,ko01000 inorganic pyrophosphatase
PBONODFP_00793 3.82e-228 - - - K - - - Transcriptional regulator
PBONODFP_00794 0.0 parC - - L ko:K02621 - ko00000,ko01000,ko02048,ko03032,ko03036 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PBONODFP_00795 0.0 parE - - L ko:K02622 - ko00000,ko01000,ko02048,ko03032,ko03036 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PBONODFP_00796 2.4e-137 plsY 2.3.1.15 - I ko:K08591 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko01004 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
PBONODFP_00797 7.34e-217 lacX 5.1.3.3 - G ko:K01785 ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130 ko00000,ko00001,ko00002,ko01000 Aldose 1-epimerase
PBONODFP_00798 0.0 hslU - - O ko:K03667 - ko00000,ko03110 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
PBONODFP_00799 6.84e-121 hslV 3.4.25.2 - O ko:K01419 - ko00000,ko01000,ko01002 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
PBONODFP_00800 1.5e-227 xerC - - D ko:K03733,ko:K04763 - ko00000,ko03036 Belongs to the 'phage' integrase family. XerC subfamily
PBONODFP_00801 0.0 trmFO 2.1.1.74 - J ko:K04094 - ko00000,ko01000,ko03016,ko03036 Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
PBONODFP_00802 0.0 topA 5.99.1.2 - L ko:K03168 - ko00000,ko01000,ko03032,ko03400 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
PBONODFP_00803 8.11e-203 dprA - - LU ko:K04096 - ko00000 DNA protecting protein DprA
PBONODFP_00804 2.04e-175 rnhB 3.1.26.4 - L ko:K03470 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PBONODFP_00805 1.85e-206 rbgA - - S ko:K14540 - ko00000,ko03009 Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
PBONODFP_00807 7.29e-292 XK27_05470 - - E - - - Methionine synthase
PBONODFP_00808 1.22e-219 cpsY - - K - - - Transcriptional regulator, LysR family
PBONODFP_00809 5.85e-159 - 1.5.1.40 - S ko:K06988 - ko00000,ko01000 NADP oxidoreductase coenzyme F420-dependent
PBONODFP_00810 4.28e-253 XK27_00915 - - C - - - Luciferase-like monooxygenase
PBONODFP_00811 0.0 qacA - - EGP - - - Major Facilitator
PBONODFP_00812 0.0 ctpA 3.4.21.102 - M ko:K03797 - ko00000,ko01000,ko01002 Belongs to the peptidase S41A family
PBONODFP_00813 9.33e-48 yozE - - S - - - Belongs to the UPF0346 family
PBONODFP_00814 3.29e-147 ypmS - - S - - - Uncharacterized protein conserved in bacteria (DUF2140)
PBONODFP_00815 5.91e-209 XK27_03630 - - E - - - GDSL-like Lipase/Acylhydrolase
PBONODFP_00816 2.03e-189 WQ51_01275 - - S - - - EDD domain protein, DegV family
PBONODFP_00817 1.8e-119 folA 1.5.1.3 - H ko:K00287 ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523 ko00000,ko00001,ko00002,ko01000 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
PBONODFP_00818 4.04e-242 thyA 2.1.1.45 - F ko:K00560 ko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523 ko00000,ko00001,ko00002,ko01000 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
PBONODFP_00819 0.0 yfmR - - S ko:K15738 - ko00000,ko02000 ABC transporter, ATP-binding protein
PBONODFP_00820 6.46e-109 - - - - - - - -
PBONODFP_00821 3.65e-291 cca 2.7.7.72 - J ko:K00974 ko03013,map03013 ko00000,ko00001,ko01000,ko03016 Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
PBONODFP_00822 1.39e-185 dapB 1.17.1.8 - E ko:K00215 ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
PBONODFP_00823 1.29e-192 - 3.1.3.102, 3.1.3.104 - S ko:K20861 ko00740,ko01100,ko01110,map00740,map01100,map01110 ko00000,ko00001,ko00002,ko01000 hydrolase
PBONODFP_00824 5.83e-291 XK27_05225 - - S - - - Tetratricopeptide repeat protein
PBONODFP_00825 5.57e-55 hup - - L ko:K03530 - ko00000,ko03032,ko03036,ko03400 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
PBONODFP_00826 2.06e-314 der - - S ko:K03977 - ko00000,ko03009 GTPase that plays an essential role in the late steps of ribosome biogenesis
PBONODFP_00827 1.98e-281 rpsA - - J ko:K02945 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal protein S1
PBONODFP_00828 1.27e-151 cmk 2.7.4.25 - F ko:K00945 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the cytidylate kinase family. Type 1 subfamily
PBONODFP_00829 1.25e-39 - - - M - - - Lysin motif
PBONODFP_00830 0.0 recQ 3.6.4.12 - L ko:K03654 ko03018,map03018 ko00000,ko00001,ko01000,ko03400 ATP-dependent DNA helicase RecQ
PBONODFP_00831 3.38e-252 - - - S - - - Helix-turn-helix domain
PBONODFP_00832 2.24e-126 ribU - - U - - - Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
PBONODFP_00833 2.69e-167 rluB 5.4.99.22 - J ko:K06178 - ko00000,ko01000,ko03009 Belongs to the pseudouridine synthase RsuA family
PBONODFP_00834 1.3e-132 scpB - - D ko:K06024 - ko00000,ko03036 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
PBONODFP_00835 5.83e-175 scpA - - D ko:K05896 - ko00000,ko03036 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
PBONODFP_00836 3.99e-92 ribT - - K ko:K02859 - ko00000 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PBONODFP_00837 3.13e-211 xerD - - D ko:K04763 - ko00000,ko03036 recombinase XerD
PBONODFP_00838 7.94e-218 yitL - - S ko:K00243 - ko00000 S1 domain
PBONODFP_00839 2.51e-98 ytwI - - S - - - Protein of unknown function (DUF441)
PBONODFP_00840 0.0 pyk 2.7.1.40 - G ko:K00873 ko00010,ko00230,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko04930,ko05165,ko05203,ko05230,map00010,map00230,map00620,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map04930,map05165,map05203,map05230 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Belongs to the pyruvate kinase family
PBONODFP_00841 8.69e-230 pfkA 2.7.1.11 - F ko:K00850 ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04152,ko05230,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04152,map05230 ko00000,ko00001,ko00002,ko01000,ko01009,ko03019 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
PBONODFP_00842 0.0 dnaE 2.7.7.7 - L ko:K02337 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase
PBONODFP_00843 7.03e-40 - - - S - - - Protein of unknown function (DUF2929)
PBONODFP_00844 0.0 clpB - - O ko:K03695 ko04213,map04213 ko00000,ko00001,ko03110 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
PBONODFP_00845 3.17e-299 pepT 3.4.11.4 - E ko:K01258 - ko00000,ko01000,ko01002 Cleaves the N-terminal amino acid of tripeptides
PBONODFP_00846 1.61e-251 yqfO - - S - - - Belongs to the GTP cyclohydrolase I type 2 NIF3 family
PBONODFP_00847 8.34e-165 trmK 2.1.1.217 - S ko:K06967 - ko00000,ko01000,ko03016 SAM-dependent methyltransferase
PBONODFP_00848 2.89e-294 - - - M - - - O-Antigen ligase
PBONODFP_00849 8.81e-166 drrB - - U ko:K01992 - ko00000,ko00002,ko02000 ABC-2 type transporter
PBONODFP_00850 1.71e-212 drrA - - V ko:K01990 - ko00000,ko00002,ko02000 ABC transporter
PBONODFP_00851 2.74e-112 - - - K - - - helix_turn_helix multiple antibiotic resistance protein
PBONODFP_00852 3.55e-281 - - - T - - - diguanylate cyclase
PBONODFP_00853 7.43e-97 - - - S - - - Psort location Cytoplasmic, score
PBONODFP_00854 0.0 umuC - - L ko:K03502 - ko00000,ko03400 impB/mucB/samB family C-terminal domain
PBONODFP_00855 5.78e-215 - - - K - - - Bacterial regulatory helix-turn-helix protein, lysR family
PBONODFP_00856 3.05e-95 - - - - - - - -
PBONODFP_00857 2.66e-167 - - - S - - - Belongs to the short-chain dehydrogenases reductases (SDR) family
PBONODFP_00858 1.88e-222 - - - C - - - C4-dicarboxylate transmembrane transporter activity
PBONODFP_00859 2.51e-150 - - - GM - - - NAD(P)H-binding
PBONODFP_00860 1.17e-120 - - - S ko:K06910 - ko00000 Phosphatidylethanolamine-binding protein
PBONODFP_00861 6.7e-102 yphH - - S - - - Cupin domain
PBONODFP_00862 3.55e-79 - - - I - - - sulfurtransferase activity
PBONODFP_00863 3.83e-178 gdh 1.1.1.47, 1.1.1.53 - IQ ko:K00034,ko:K00038 ko00030,ko00140,ko01100,ko01120,ko01200,map00030,map00140,map01100,map01120,map01200 ko00000,ko00001,ko01000 reductase
PBONODFP_00864 3.41e-151 - - - GM - - - NAD(P)H-binding
PBONODFP_00865 2.31e-277 - - - - - - - -
PBONODFP_00866 0.0 - - - V ko:K06147,ko:K18892 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter
PBONODFP_00867 0.0 XK27_09600 - - V ko:K06147,ko:K18891 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter, ATP-binding protein
PBONODFP_00868 1.51e-225 - - - O - - - protein import
PBONODFP_00869 2.77e-291 amd - - E - - - Peptidase family M20/M25/M40
PBONODFP_00870 2.43e-208 yhxD - - IQ - - - KR domain
PBONODFP_00872 9.38e-91 - - - - - - - -
PBONODFP_00873 3.51e-185 - - - K - - - Helix-turn-helix XRE-family like proteins
PBONODFP_00874 0.0 - - - E - - - Amino Acid
PBONODFP_00875 1.67e-86 lysM - - M - - - LysM domain
PBONODFP_00876 4.2e-286 dhaT 1.1.1.202 - C ko:K00086 ko00561,ko00640,map00561,map00640 ko00000,ko00001,ko01000 Dehydrogenase
PBONODFP_00877 6.8e-272 adhC 1.1.1.90 - C ko:K00055 ko00350,ko00360,ko00622,ko00623,ko01100,ko01120,ko01220,map00350,map00360,map00622,map00623,map01100,map01120,map01220 ko00000,ko00001,ko00002,ko01000 Zn-dependent alcohol dehydrogenases, class III
PBONODFP_00878 0.0 copA 3.6.3.3, 3.6.3.4, 3.6.3.5, 3.6.3.54 - P ko:K01533,ko:K01534,ko:K17686 ko01524,ko04016,map01524,map04016 ko00000,ko00001,ko01000 P-type ATPase
PBONODFP_00879 1.23e-57 - - - S - - - Cupredoxin-like domain
PBONODFP_00880 1.36e-84 - - - S - - - Cupredoxin-like domain
PBONODFP_00881 0.0 aapA - - M - - - Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
PBONODFP_00882 2.81e-181 - - - K - - - Helix-turn-helix domain
PBONODFP_00883 1.47e-51 - - - S ko:K07343 - ko00000 TfoX C-terminal domain
PBONODFP_00884 3.05e-289 hpk9 2.7.13.3 - T ko:K07706 ko02020,ko02024,map02020,map02024 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 GHKL domain
PBONODFP_00885 0.0 - - - - - - - -
PBONODFP_00886 2.69e-99 - - - - - - - -
PBONODFP_00887 1.06e-238 - - - S - - - Cell surface protein
PBONODFP_00888 6.02e-137 - - - S - - - WxL domain surface cell wall-binding
PBONODFP_00889 2.67e-225 - - - C - - - Alcohol dehydrogenase GroES-like domain
PBONODFP_00890 5.83e-87 - - - S - - - Iron-sulphur cluster biosynthesis
PBONODFP_00891 8.45e-147 - - - S - - - GyrI-like small molecule binding domain
PBONODFP_00892 4.55e-243 ynjC - - S - - - Cell surface protein
PBONODFP_00893 4.48e-130 - - - S - - - WxL domain surface cell wall-binding
PBONODFP_00894 1.47e-83 - - - - - - - -
PBONODFP_00895 2.73e-296 - - - NU - - - Mycoplasma protein of unknown function, DUF285
PBONODFP_00896 4.8e-156 - - - - - - - -
PBONODFP_00897 1.24e-148 - - - S - - - Haloacid dehalogenase-like hydrolase
PBONODFP_00898 3.19e-146 lepB 3.4.21.89 - U ko:K03100 ko02024,ko03060,map02024,map03060 ko00000,ko00001,ko01000,ko01002 Belongs to the peptidase S26 family
PBONODFP_00899 8.4e-112 - - - - - - - -
PBONODFP_00900 6.25e-112 yvbK - - K - - - GNAT family
PBONODFP_00901 2.8e-49 - - - - - - - -
PBONODFP_00902 2.81e-64 - - - - - - - -
PBONODFP_00903 1.1e-144 pgm8 - - G - - - Histidine phosphatase superfamily (branch 1)
PBONODFP_00904 2.65e-78 - - - S - - - Domain of unknown function (DUF4440)
PBONODFP_00905 7.46e-201 - - - K - - - LysR substrate binding domain
PBONODFP_00906 1.64e-130 - - - GM - - - NAD(P)H-binding
PBONODFP_00907 1.66e-247 adh2 1.1.1.1 - E ko:K00001 ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220 ko00000,ko00001,ko01000 alcohol dehydrogenase
PBONODFP_00908 3.38e-193 - - - IQ - - - Enoyl-(Acyl carrier protein) reductase
PBONODFP_00909 2.21e-46 - - - - - - - -
PBONODFP_00910 2.1e-99 - - - T - - - Belongs to the universal stress protein A family
PBONODFP_00911 1.04e-124 maa 2.3.1.79 - S ko:K00661 - ko00000,ko01000 Maltose O-acetyltransferase
PBONODFP_00912 7.47e-164 ysaA 3.1.3.5, 3.8.1.2 - S ko:K01560,ko:K07025,ko:K08723 ko00230,ko00240,ko00361,ko00625,ko00760,ko01100,ko01110,ko01120,map00230,map00240,map00361,map00625,map00760,map01100,map01110,map01120 ko00000,ko00001,ko01000 Haloacid dehalogenase-like hydrolase
PBONODFP_00913 1.03e-40 - - - - - - - -
PBONODFP_00914 1.69e-30 - - - - - - - -
PBONODFP_00915 9.15e-132 - 1.5.1.40 - S ko:K06988 - ko00000,ko01000 NADP oxidoreductase coenzyme F420-dependent
PBONODFP_00916 2.17e-288 patB 4.4.1.8 - E ko:K14155 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 ko00000,ko00001,ko01000,ko01007 Aminotransferase, class I
PBONODFP_00917 1.86e-132 - - - M - - - Protein of unknown function (DUF3737)
PBONODFP_00918 1.8e-249 - - - C - - - Aldo/keto reductase family
PBONODFP_00920 0.0 mdlB - - V ko:K06147,ko:K18890 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter
PBONODFP_00921 0.0 mdlA - - V ko:K06148,ko:K18889 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter
PBONODFP_00922 4.51e-314 - - - EGP - - - Major Facilitator
PBONODFP_00925 1.58e-230 yhgE - - V ko:K01421 - ko00000 domain protein
PBONODFP_00926 8.85e-141 - - - K - - - Transcriptional regulator (TetR family)
PBONODFP_00927 6.88e-71 - - - K - - - helix_turn_helix, Arsenical Resistance Operon Repressor
PBONODFP_00928 4.36e-197 endA - - F ko:K15051 - ko00000 DNA RNA non-specific endonuclease
PBONODFP_00929 2.81e-134 yokL3 - - J - - - Acetyltransferase (GNAT) domain
PBONODFP_00930 7.2e-125 - 2.3.1.128 - J ko:K03790 - ko00000,ko01000,ko03009 Acetyltransferase (GNAT) domain
PBONODFP_00931 1.48e-167 - - - M - - - Phosphotransferase enzyme family
PBONODFP_00932 9.53e-284 - - - S ko:K07052 - ko00000 CAAX protease self-immunity
PBONODFP_00933 0.0 ykpA - - S - - - ABC transporter, ATP-binding protein
PBONODFP_00934 4.68e-190 - 3.1.3.102, 3.1.3.104 - S ko:K20861 ko00740,ko01100,ko01110,map00740,map01100,map01110 ko00000,ko00001,ko00002,ko01000 hydrolase
PBONODFP_00935 0.0 - - - S - - - Predicted membrane protein (DUF2207)
PBONODFP_00936 0.0 uvrA3 - - L ko:K03701 ko03420,map03420 ko00000,ko00001,ko03400 excinuclease ABC
PBONODFP_00937 2.84e-266 - - - EGP - - - Major facilitator Superfamily
PBONODFP_00938 2.67e-220 ropB - - K - - - Helix-turn-helix XRE-family like proteins
PBONODFP_00939 1.45e-297 yxiO - - S ko:K06902 ko04138,map04138 ko00000,ko00001,ko02000,ko04131 Vacuole effluxer Atg22 like
PBONODFP_00940 0.0 npp - - S - - - type I phosphodiesterase nucleotide pyrophosphatase
PBONODFP_00941 1.58e-203 - - - I - - - alpha/beta hydrolase fold
PBONODFP_00942 5.86e-167 treR - - K ko:K03486 - ko00000,ko03000 UTRA
PBONODFP_00943 0.0 - - - - - - - -
PBONODFP_00944 2e-52 - - - S - - - Cytochrome B5
PBONODFP_00945 4.79e-250 qor 1.1.1.1, 1.6.5.5 - C ko:K00001,ko:K00344 ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220 ko00000,ko00001,ko01000 Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily
PBONODFP_00946 6.86e-175 racD 5.1.1.13 - G ko:K01779 ko00250,ko01054,map00250,map01054 ko00000,ko00001,ko01000 Belongs to the aspartate glutamate racemases family
PBONODFP_00947 9.51e-317 yijG - GT2 M ko:K11936 ko02026,map02026 ko00000,ko00001,ko01000,ko01003,ko02000 Glycosyl transferase
PBONODFP_00948 6.32e-114 - - - - - - - -
PBONODFP_00949 5.7e-127 yqeG - - S ko:K07015 - ko00000 HAD phosphatase, family IIIA
PBONODFP_00950 2.57e-274 yqeH - - S ko:K06948 - ko00000,ko03009 Ribosome biogenesis GTPase YqeH
PBONODFP_00951 2.19e-67 yhbY - - J ko:K07574 - ko00000,ko03009 RNA-binding protein
PBONODFP_00952 4.19e-153 nadD 2.7.7.18 - H ko:K00969 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
PBONODFP_00953 1.71e-149 yqeK - - H - - - Hydrolase, HD family
PBONODFP_00954 1.06e-76 rsfS - - J ko:K09710 - ko00000,ko03009 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
PBONODFP_00955 3.3e-180 yqeM - - Q - - - Methyltransferase
PBONODFP_00956 1.02e-278 ylbM - - S - - - Belongs to the UPF0348 family
PBONODFP_00957 2.12e-126 ylbN - - S ko:K07040 - ko00000 Uncharacterized ACR, COG1399
PBONODFP_00958 7.2e-123 - - - S - - - Peptidase propeptide and YPEB domain
PBONODFP_00959 1.13e-225 yeaB - - P - - - Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
PBONODFP_00960 0.0 gnd 1.1.1.343, 1.1.1.44 - H ko:K00033 ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
PBONODFP_00961 1.8e-310 rarA - - L ko:K07478 - ko00000 recombination factor protein RarA
PBONODFP_00962 1.38e-155 csrR - - K - - - response regulator
PBONODFP_00963 0.0 arlS 2.7.13.3 - T ko:K18940 ko02020,map02020 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Histidine kinase
PBONODFP_00964 1.59e-217 ubiA 2.5.1.74 - H ko:K02548 ko00130,ko01100,ko01110,map00130,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko01006 1,4-dihydroxy-2-naphthoate
PBONODFP_00965 0.0 sbcC - - L ko:K03546 - ko00000,ko03400 Putative exonuclease SbcCD, C subunit
PBONODFP_00966 5.55e-288 sbcD - - L ko:K03547 - ko00000,ko03400 SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity
PBONODFP_00967 1.77e-122 - - - S - - - SdpI/YhfL protein family
PBONODFP_00968 1.4e-208 yidC - - U ko:K03217 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044,ko03029 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PBONODFP_00969 2.36e-60 acyP 3.6.1.7 - C ko:K01512 ko00620,ko00627,ko01120,map00620,map00627,map01120 ko00000,ko00001,ko01000 Belongs to the acylphosphatase family
PBONODFP_00970 4.46e-179 spoU - - J ko:K03437 - ko00000,ko03016 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PBONODFP_00971 1.72e-120 XK27_09705 - - S ko:K06950 - ko00000 Metal dependent phosphohydrolases with conserved 'HD' motif.
PBONODFP_00972 1.09e-83 yodB - - K - - - Transcriptional regulator, HxlR family
PBONODFP_00973 6.88e-257 pheS 6.1.1.20 - J ko:K01889 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
PBONODFP_00974 0.0 pheT 6.1.1.20 - J ko:K01890 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PBONODFP_00975 6.11e-249 mltG - - S ko:K07082 - ko00000 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
PBONODFP_00976 7.5e-146 udk 2.7.1.48 - F ko:K00876 ko00240,ko00983,ko01100,map00240,map00983,map01100 ko00000,ko00001,ko01000 Cytidine monophosphokinase
PBONODFP_00977 1.09e-105 greA - - K ko:K03624 - ko00000,ko03021 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PBONODFP_00978 9.72e-146 - - - S - - - membrane
PBONODFP_00979 5.72e-99 - - - K - - - LytTr DNA-binding domain
PBONODFP_00980 6.12e-72 yneR - - S - - - Belongs to the HesB IscA family
PBONODFP_00981 0.0 - - - S - - - membrane
PBONODFP_00982 0.0 pbp2b - - M ko:K00687,ko:K12553,ko:K21465,ko:K21466 ko00550,ko01100,ko01501,map00550,map01100,map01501 ko00000,ko00001,ko01000,ko01011 Penicillin-binding Protein
PBONODFP_00983 5.33e-30 rpmG - - J ko:K02913 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL33 family
PBONODFP_00984 9.29e-132 fthC 6.3.3.2 - H ko:K01934 ko00670,ko01100,map00670,map01100 ko00000,ko00001,ko01000 Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
PBONODFP_00985 3.52e-153 gluP 3.4.21.105 - S ko:K19225 - ko00000,ko01000,ko01002 Peptidase, S54 family
PBONODFP_00986 1.79e-131 purN 2.1.2.2 - F ko:K11175 ko00230,ko00670,ko01100,ko01110,ko01130,map00230,map00670,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
PBONODFP_00987 9.93e-242 purM 6.3.3.1 - F ko:K01933 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Phosphoribosylformylglycinamidine cyclo-ligase
PBONODFP_00988 0.0 purF 2.4.2.14 - F ko:K00764 ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000,ko01002 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
PBONODFP_00989 0.0 purL 6.3.5.3 - F ko:K01952 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PBONODFP_00990 2.82e-163 purQ 6.3.5.3 - F ko:K01952 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PBONODFP_00991 1.17e-55 purS 6.3.5.3 - F ko:K01952 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PBONODFP_00992 3.95e-167 purC 6.3.2.6 - F ko:K01923 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Belongs to the SAICAR synthetase family
PBONODFP_00993 6.77e-269 purK 6.3.4.18 - F ko:K01589 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
PBONODFP_00994 3.77e-104 purE 5.4.99.18 - F ko:K01588 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
PBONODFP_00995 7.9e-305 XK27_09615 1.5.1.36 - S ko:K19784,ko:K22393 ko00740,ko01100,map00740,map01100 ko00000,ko00001,ko01000 reductase
PBONODFP_00996 9.92e-143 - - - S - - - NADPH-dependent FMN reductase
PBONODFP_00997 1.16e-242 lplL 6.3.1.20 - H ko:K03800 ko00785,ko01100,map00785,map01100 ko00000,ko00001,ko01000 Bacterial lipoate protein ligase C-terminus
PBONODFP_00998 2.04e-189 ptp3 3.1.3.48 - T ko:K01104 - ko00000,ko01000 Tyrosine phosphatase family
PBONODFP_00999 5.95e-153 cah 4.2.1.1 - P ko:K01674 ko00910,map00910 ko00000,ko00001,ko01000 Eukaryotic-type carbonic anhydrase
PBONODFP_01000 4.15e-191 - - - S - - - Alpha/beta hydrolase of unknown function (DUF915)
PBONODFP_01001 3.7e-233 ansB 3.5.1.1 - EJ ko:K01424 ko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110 ko00000,ko00001,ko01000 Asparaginase
PBONODFP_01002 8.34e-178 cysA - - V ko:K02003 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
PBONODFP_01003 0.0 - - - V ko:K02004 - ko00000,ko00002,ko02000 FtsX-like permease family
PBONODFP_01004 4.76e-56 - - - - - - - -
PBONODFP_01005 8.2e-81 - - - K - - - Transcriptional regulator, GntR family
PBONODFP_01006 7.89e-212 - - - V ko:K01990 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
PBONODFP_01007 3.41e-190 - - - - - - - -
PBONODFP_01008 1.1e-103 usp5 - - T - - - universal stress protein
PBONODFP_01009 8.93e-47 - - - - - - - -
PBONODFP_01010 4.02e-95 gtcA - - S - - - Teichoic acid glycosylation protein
PBONODFP_01011 1.02e-113 - - - - - - - -
PBONODFP_01012 1.4e-65 - - - - - - - -
PBONODFP_01013 4.79e-13 - - - - - - - -
PBONODFP_01014 3.03e-299 patB 4.4.1.8 - E ko:K14155 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 ko00000,ko00001,ko01000,ko01007 Aminotransferase, class I
PBONODFP_01015 1.16e-110 - - - F - - - belongs to the nudix hydrolase family
PBONODFP_01016 1.52e-151 - - - - - - - -
PBONODFP_01017 1.21e-69 - - - - - - - -
PBONODFP_01019 0.0 nplT 3.2.1.133, 3.2.1.135, 3.2.1.54 GH13 G ko:K01208 ko00500,ko01100,map00500,map01100 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 13 family
PBONODFP_01020 0.0 thrC 4.2.3.1 - E ko:K01733 ko00260,ko00750,ko01100,ko01110,ko01120,ko01230,map00260,map00750,map01100,map01110,map01120,map01230 ko00000,ko00001,ko00002,ko01000 Threonine synthase
PBONODFP_01021 4.65e-186 - - - S - - - Sucrose-6F-phosphate phosphohydrolase
PBONODFP_01022 2.96e-41 - - - S - - - Pentapeptide repeats (8 copies)
PBONODFP_01023 1.76e-143 - 2.3.1.79 - S ko:K00661 - ko00000,ko01000 Maltose acetyltransferase
PBONODFP_01024 2.28e-132 - 3.6.1.13 - L ko:K01515 ko00230,map00230 ko00000,ko00001,ko01000 Belongs to the Nudix hydrolase family
PBONODFP_01025 2.26e-91 - - - FG - - - Scavenger mRNA decapping enzyme C-term binding
PBONODFP_01026 1.62e-173 fabG 1.1.1.100 - IQ ko:K00059 ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 Enoyl-(Acyl carrier protein) reductase
PBONODFP_01027 3.94e-49 XK27_01315 - - S - - - Protein of unknown function (DUF2829)
PBONODFP_01028 3.48e-269 ybhE - - S ko:K09963 - ko00000 Bacterial protein of unknown function (DUF871)
PBONODFP_01029 1.8e-293 - - - S - - - Sterol carrier protein domain
PBONODFP_01030 7.54e-115 yrxA - - S ko:K07105 - ko00000 3H domain
PBONODFP_01031 0.0 nadC2 6.3.4.21 - F ko:K00763 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko01000 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
PBONODFP_01032 2.13e-152 - - - K - - - Transcriptional regulator
PBONODFP_01033 9.76e-234 - - - V ko:K01992 - ko00000,ko00002,ko02000 ABC transporter
PBONODFP_01034 4.29e-173 - - - V ko:K01990 - ko00000,ko00002,ko02000 AAA domain, putative AbiEii toxin, Type IV TA system
PBONODFP_01035 9.77e-120 dsdA 4.3.1.18 - E ko:K01753 ko00260,map00260 ko00000,ko00001,ko01000 Belongs to the serine threonine dehydratase family. DsdA subfamily
PBONODFP_01036 2.16e-26 - - - - - - - -
PBONODFP_01037 4.63e-24 - - - - - - - -
PBONODFP_01038 0.0 - 3.6.3.44 - P ko:K18104 ko01501,ko02010,map01501,map02010 ko00000,ko00001,ko00002,ko01000,ko01504,ko02000 ABC transporter transmembrane region
PBONODFP_01039 0.0 - 2.4.1.52 GT4 M ko:K00712 - ko00000,ko01000,ko01003 Glycosyl transferases group 1
PBONODFP_01040 0.0 - - - V ko:K02003,ko:K02004 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
PBONODFP_01041 2.1e-33 - - - - - - - -
PBONODFP_01042 0.0 pgi 5.3.1.9 - G ko:K01810 ko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the GPI family
PBONODFP_01043 2.51e-200 glcU - - U ko:K05340 - ko00000,ko02000 sugar transport
PBONODFP_01044 1.83e-277 ywbD 2.1.1.191 - J ko:K06969 - ko00000,ko01000,ko03009 S-adenosylmethionine-dependent methyltransferase
PBONODFP_01045 0.0 yclK - - T - - - Histidine kinase
PBONODFP_01046 1.45e-173 yclJ - - K ko:K02483 - ko00000,ko02022 response regulator
PBONODFP_01047 2.12e-308 XK27_08635 - - S ko:K09157 - ko00000 UPF0210 protein
PBONODFP_01048 1.06e-51 XK27_08630 - - T ko:K07166 - ko00000 Belongs to the UPF0237 family
PBONODFP_01049 1.26e-218 - - - EG - - - EamA-like transporter family
PBONODFP_01051 6.24e-120 - - - S - - - ECF-type riboflavin transporter, S component
PBONODFP_01052 1.31e-64 - - - - - - - -
PBONODFP_01053 1.96e-273 yceI - - EGP ko:K08369 - ko00000,ko02000 Major Facilitator
PBONODFP_01054 1.9e-176 - - - F - - - NUDIX domain
PBONODFP_01055 2.68e-32 - - - - - - - -
PBONODFP_01057 1.65e-206 - - - S - - - Alpha/beta hydrolase of unknown function (DUF915)
PBONODFP_01058 1.37e-219 ykfC 3.4.14.13 - M ko:K20742 - ko00000,ko01000,ko01002 NlpC/P60 family
PBONODFP_01059 5.92e-107 - - - K ko:K03719 - ko00000,ko03000,ko03036 AsnC family
PBONODFP_01060 2.29e-48 - - - - - - - -
PBONODFP_01061 1.11e-45 - - - - - - - -
PBONODFP_01062 1.62e-277 - - - T - - - diguanylate cyclase
PBONODFP_01063 0.0 - - - S - - - ABC transporter, ATP-binding protein
PBONODFP_01064 9.24e-140 - - - K ko:K06977 - ko00000 acetyltransferase
PBONODFP_01065 4.74e-106 - - - E - - - Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PBONODFP_01066 9.2e-62 - - - - - - - -
PBONODFP_01067 0.0 nagE 2.7.1.193, 2.7.1.199, 2.7.1.208 - G ko:K02777,ko:K02802,ko:K02803,ko:K02804,ko:K20107,ko:K20108,ko:K20116,ko:K20117,ko:K20118 ko00010,ko00500,ko00520,ko02026,ko02060,ko05111,map00010,map00500,map00520,map02026,map02060,map05111 ko00000,ko00001,ko00002,ko01000,ko02000 phosphotransferase system, EIIB
PBONODFP_01068 5.32e-242 panE1 1.1.1.169 - H ko:K00077 ko00770,ko01100,ko01110,map00770,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
PBONODFP_01069 5.97e-210 - - - S - - - Uncharacterised protein, DegV family COG1307
PBONODFP_01070 1.01e-293 hom 1.1.1.3 - E ko:K00003 ko00260,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00270,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Homoserine dehydrogenase
PBONODFP_01071 3.52e-311 metY 2.5.1.49 - E ko:K01740 ko00270,ko01100,map00270,map01100 ko00000,ko00001,ko01000 Catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol
PBONODFP_01072 1.53e-213 metAA 2.3.1.46 - E ko:K00651 ko00270,ko00920,ko01100,ko01110,ko01230,map00270,map00920,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Transfers an acetyl group from acetyl-CoA to
PBONODFP_01073 2.79e-226 ABC-SBP - - S ko:K01989 - ko00000,ko00002,ko02000 ABC transporter
PBONODFP_01074 1.73e-195 XK27_08840 - - U ko:K05832 - ko00000,ko00002,ko02000 Belongs to the binding-protein-dependent transport system permease family
PBONODFP_01075 1.32e-178 XK27_08845 - - S ko:K05833 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
PBONODFP_01076 0.0 npr 1.11.1.1 - C ko:K05910 - ko00000,ko01000 NADH oxidase
PBONODFP_01077 5.24e-124 - - - K - - - Transcriptional regulator, MarR family
PBONODFP_01078 8.08e-154 ydgI3 - - C - - - Nitroreductase family
PBONODFP_01079 0.0 nagE 2.7.1.193, 2.7.1.199, 2.7.1.208 - G ko:K02777,ko:K02802,ko:K02803,ko:K02804,ko:K20107,ko:K20108,ko:K20116,ko:K20117,ko:K20118 ko00010,ko00500,ko00520,ko02026,ko02060,ko05111,map00010,map00500,map00520,map02026,map02060,map05111 ko00000,ko00001,ko00002,ko01000,ko02000 phosphotransferase system, EIIB
PBONODFP_01080 7.52e-139 - - - S ko:K05833 - ko00000,ko00002,ko02000 ATPases associated with a variety of cellular activities
PBONODFP_01081 6.48e-195 WQ51_06230 - - U ko:K05832 - ko00000,ko00002,ko02000 Belongs to the binding-protein-dependent transport system permease family
PBONODFP_01082 8.49e-217 XK27_00670 - - S ko:K01989 - ko00000,ko00002,ko02000 ABC transporter
PBONODFP_01083 0.0 - - - - - - - -
PBONODFP_01084 1.4e-82 - - - - - - - -
PBONODFP_01085 7.52e-240 - - - S - - - Cell surface protein
PBONODFP_01086 1.27e-137 - - - S - - - WxL domain surface cell wall-binding
PBONODFP_01087 3.67e-72 acuB - - S ko:K04767 - ko00000 Domain in cystathionine beta-synthase and other proteins.
PBONODFP_01088 1.67e-49 acuB - - S ko:K04767 - ko00000 Domain in cystathionine beta-synthase and other proteins.
PBONODFP_01089 2.78e-158 livF - - E ko:K01996 ko02010,ko02024,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter
PBONODFP_01090 1.28e-180 livG - - E ko:K01995 ko02010,ko02024,map02010,map02024 ko00000,ko00001,ko00002,ko02000 Branched-chain amino acid ATP-binding cassette transporter
PBONODFP_01091 1.88e-192 livM - - E ko:K01997,ko:K01998 ko02010,ko02024,map02010,map02024 ko00000,ko00001,ko00002,ko02000 Branched-chain amino acid transport system / permease component
PBONODFP_01092 9.73e-197 livH - - U ko:K01997 ko02010,ko02024,map02010,map02024 ko00000,ko00001,ko00002,ko02000 Branched-chain amino acid transport system / permease component
PBONODFP_01093 1.04e-269 livJ - - E ko:K01999 ko02010,ko02024,map02010,map02024 ko00000,ko00001,ko00002,ko02000 Receptor family ligand binding region
PBONODFP_01095 1.15e-43 - - - - - - - -
PBONODFP_01096 2.93e-169 zmp3 - - O - - - Zinc-dependent metalloprotease
PBONODFP_01097 2.88e-106 gtcA3 - - S - - - GtrA-like protein
PBONODFP_01098 4.08e-158 - - - K - - - Helix-turn-helix XRE-family like proteins
PBONODFP_01099 0.0 mntH - - P ko:K03322 - ko00000,ko02000 H( )-stimulated, divalent metal cation uptake system
PBONODFP_01100 1.18e-94 usp2 - - T - - - Belongs to the universal stress protein A family
PBONODFP_01101 7.03e-62 - - - - - - - -
PBONODFP_01102 1.81e-150 - - - S - - - SNARE associated Golgi protein
PBONODFP_01103 1.67e-62 czrA - - K ko:K22043 - ko00000,ko03000 Transcriptional regulator, ArsR family
PBONODFP_01104 7.89e-124 - - - P - - - Cadmium resistance transporter
PBONODFP_01105 0.0 yhcA - - V ko:K02003,ko:K02004 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
PBONODFP_01106 0.0 - - - P - - - Concanavalin A-like lectin/glucanases superfamily
PBONODFP_01107 2.03e-84 - - - - - - - -
PBONODFP_01108 7.85e-205 prpA3 3.1.3.16 - T ko:K01090 - ko00000,ko01000 Calcineurin-like phosphoesterase superfamily domain
PBONODFP_01109 1.21e-73 - - - - - - - -
PBONODFP_01110 1.24e-194 - - - K - - - Helix-turn-helix domain
PBONODFP_01111 3.91e-100 pts23A - - G ko:K02777 ko00010,ko00500,ko00520,ko02026,ko02060,ko05111,map00010,map00500,map00520,map02026,map02060,map05111 ko00000,ko00001,ko00002,ko01000,ko02000 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
PBONODFP_01112 7.47e-70 ptcB 2.7.1.196, 2.7.1.205 - G ko:K02760 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system, Lactose/Cellobiose specific IIB subunit
PBONODFP_01113 0.0 pts23C - - G ko:K02761 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko02000 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PBONODFP_01114 0.0 pbg6 3.2.1.86 GT1 G ko:K01223 ko00010,ko00500,map00010,map00500 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 1 family
PBONODFP_01115 9.1e-237 - - - GM - - - Male sterility protein
PBONODFP_01116 1.79e-100 - - - K - - - helix_turn_helix, mercury resistance
PBONODFP_01117 4.61e-101 - - - M - - - LysM domain
PBONODFP_01118 4.93e-38 - - - M - - - Lysin motif
PBONODFP_01119 8.82e-44 - - - M - - - Lysin motif
PBONODFP_01120 4.28e-125 - - - S - - - SdpI/YhfL protein family
PBONODFP_01121 4.55e-45 - - - S - - - Bacterial cellulose synthase subunit
PBONODFP_01122 6.49e-171 - - - T - - - diguanylate cyclase activity
PBONODFP_01123 8.65e-226 trxB 1.8.1.9 - C ko:K00384 ko00450,map00450 ko00000,ko00001,ko01000 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
PBONODFP_01124 7.15e-140 yviA - - S - - - Protein of unknown function (DUF421)
PBONODFP_01125 7.54e-99 - - - S - - - Protein of unknown function (DUF3290)
PBONODFP_01126 0.0 pgm 5.4.2.2 - G ko:K01835 ko00010,ko00030,ko00052,ko00230,ko00500,ko00520,ko00521,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00052,map00230,map00500,map00520,map00521,map01100,map01110,map01120,map01130 ko00000,ko00001,ko00002,ko01000 Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
PBONODFP_01127 5.9e-170 - - - T - - - Putative diguanylate phosphodiesterase
PBONODFP_01128 0.0 nox2 - - S - - - Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
PBONODFP_01129 1.89e-134 aad 3.4.13.22 - E ko:K08641 ko01502,ko02020,map01502,map02020 ko00000,ko00001,ko00002,ko01000,ko01002,ko01011,ko01504 Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
PBONODFP_01130 5.33e-268 blt - - EGP ko:K08153 - ko00000,ko00002,ko02000 transporter
PBONODFP_01131 9.45e-152 yfbR - - S ko:K07023 - ko00000 HD containing hydrolase-like enzyme
PBONODFP_01132 0.0 uvrB - - L ko:K03702 ko03420,map03420 ko00000,ko00001,ko03400 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
PBONODFP_01133 0.0 uvrA - - L ko:K03701 ko03420,map03420 ko00000,ko00001,ko03400 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
PBONODFP_01134 2.21e-113 luxS 4.4.1.21 - H ko:K07173 ko00270,ko01100,ko01230,ko02024,ko02026,ko05111,map00270,map01100,map01230,map02024,map02026,map05111 ko00000,ko00001,ko00002,ko01000 Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
PBONODFP_01135 7.5e-302 argG 6.3.4.5 - E ko:K01940 ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,ko05418,map00220,map00250,map01100,map01110,map01130,map01230,map05418 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the argininosuccinate synthase family. Type 1 subfamily
PBONODFP_01136 0.0 argH 4.3.2.1 - E ko:K01755 ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,map00220,map00250,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000,ko04147 argininosuccinate lyase
PBONODFP_01137 8.62e-114 - - - S - - - Short repeat of unknown function (DUF308)
PBONODFP_01138 1.71e-207 yvcJ - - S ko:K06958 - ko00000,ko03019 Displays ATPase and GTPase activities
PBONODFP_01139 4.56e-243 yvcK - - S - - - Required for morphogenesis under gluconeogenic growth conditions
PBONODFP_01140 1.21e-215 whiA - - K ko:K09762 - ko00000 May be required for sporulation
PBONODFP_01141 0.0 oppA - - E ko:K02035,ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter, substratebinding protein
PBONODFP_01142 1.55e-225 - 1.1.1.26 - CH ko:K00015 ko00630,ko01100,ko01110,ko01120,map00630,map01100,map01110,map01120 ko00000,ko00001,ko01000 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PBONODFP_01143 5.11e-133 clpP 3.4.21.92 - O ko:K01358 ko04112,ko04212,map04112,map04212 ko00000,ko00001,ko01000,ko01002 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
PBONODFP_01145 1.14e-311 rpoN - - K ko:K03092 ko02020,ko05111,map02020,map05111 ko00000,ko00001,ko03021 Sigma-54 factor, core binding domain
PBONODFP_01146 5.75e-242 cggR - - K ko:K05311 - ko00000,ko03000 Putative sugar-binding domain
PBONODFP_01147 2.02e-245 gap 1.2.1.12 - G ko:K00134 ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
PBONODFP_01148 1.31e-285 pgk 2.7.2.3 - F ko:K00927 ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the phosphoglycerate kinase family
PBONODFP_01149 7.15e-179 tpiA 5.3.1.1 - G ko:K01803 ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko04147 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
PBONODFP_01150 0.0 eno 4.2.1.11 - G ko:K01689 ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066 ko00000,ko00001,ko00002,ko01000,ko03019,ko04147 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
PBONODFP_01151 5.11e-171 - - - - - - - -
PBONODFP_01152 0.0 eriC - - P ko:K03281 - ko00000 chloride
PBONODFP_01153 1.76e-43 secG - - U ko:K03075 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Preprotein translocase
PBONODFP_01154 6.62e-180 est 3.1.1.1 - S ko:K03928 - ko00000,ko01000 Serine aminopeptidase, S33
PBONODFP_01155 0.0 rnr - - J ko:K12573 ko03018,map03018 ko00000,ko00001,ko01000,ko03016,ko03019 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
PBONODFP_01156 2.4e-107 smpB - - J ko:K03664 - ko00000 the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
PBONODFP_01158 1.1e-257 - - - - - - - -
PBONODFP_01159 0.0 typA - - T ko:K06207 - ko00000 GTP-binding protein TypA
PBONODFP_01160 1.23e-177 suhB 3.1.3.25 - G ko:K01092 ko00521,ko00562,ko01100,ko04070,map00521,map00562,map01100,map04070 ko00000,ko00001,ko00002,ko01000 Belongs to the inositol monophosphatase superfamily
PBONODFP_01161 1.53e-61 yktA - - S - - - Belongs to the UPF0223 family
PBONODFP_01162 2.51e-208 - 1.1.1.27 - C ko:K00016 ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922 ko00000,ko00001,ko01000,ko04147 L-malate dehydrogenase activity
PBONODFP_01163 0.0 pdhD 1.8.1.4 - C ko:K00382 ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200 br01601,ko00000,ko00001,ko00002,ko01000,ko04147 Dehydrogenase
PBONODFP_01164 2.36e-285 pdhC 2.3.1.12 - C ko:K00627 ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200 br01601,ko00000,ko00001,ko00002,ko01000 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
PBONODFP_01165 6.35e-230 pdhB 1.2.4.1 - C ko:K00162 ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04922,ko05230,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200,map04066,map04922,map05230 br01601,ko00000,ko00001,ko00002,ko01000 Transketolase, C-terminal domain protein
PBONODFP_01166 1.21e-268 pdhA 1.2.4.1 - C ko:K00161 ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04922,ko05230,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200,map04066,map04922,map05230 br01601,ko00000,ko00001,ko00002,ko01000 Dehydrogenase E1 component
PBONODFP_01167 3.95e-132 def 3.5.1.88 - J ko:K01462 - ko00000,ko01000 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
PBONODFP_01168 6.45e-111 - - - - - - - -
PBONODFP_01169 4.86e-45 ykzG - - S - - - Belongs to the UPF0356 family
PBONODFP_01170 0.0 rnjA - - J ko:K12574 ko03018,map03018 ko00000,ko00001,ko01000,ko03019 An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PBONODFP_01171 5.96e-241 ytlR - - I - - - Diacylglycerol kinase catalytic domain
PBONODFP_01172 6.21e-39 - - - - - - - -
PBONODFP_01173 2.62e-168 - - - M ko:K21471 - ko00000,ko01000,ko01002,ko01011 NlpC P60 family protein
PBONODFP_01174 1.6e-221 prs2 2.7.6.1 - F ko:K00948 ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PBONODFP_01175 0.0 recD2 3.1.11.5 - L ko:K03581 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
PBONODFP_01176 1.02e-155 - - - S - - - repeat protein
PBONODFP_01177 2.41e-157 pgm6 - - G - - - phosphoglycerate mutase
PBONODFP_01178 0.0 - - - N - - - domain, Protein
PBONODFP_01179 7.05e-248 - - - S - - - Bacterial protein of unknown function (DUF916)
PBONODFP_01180 3.57e-154 - - - N - - - WxL domain surface cell wall-binding
PBONODFP_01181 4.64e-150 ktrA - - P ko:K03499 - ko00000,ko02000 domain protein
PBONODFP_01182 9.64e-307 ktrB - - P ko:K03498 - ko00000,ko02000 Potassium uptake protein
PBONODFP_01183 3.19e-285 mnmA 2.8.1.13 - J ko:K00566 ko04122,map04122 ko00000,ko00001,ko01000,ko03016 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
PBONODFP_01184 4.94e-75 XK27_04120 - - S - - - Putative amino acid metabolism
PBONODFP_01185 1.06e-277 iscS 2.8.1.7 - E ko:K04487 ko00730,ko01100,ko04122,map00730,map01100,map04122 ko00000,ko00001,ko01000,ko02048,ko03016,ko03029 Aminotransferase class V
PBONODFP_01186 5.85e-158 mtnN 3.2.2.9 - E ko:K01243 ko00270,ko01100,ko01230,map00270,map01100,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
PBONODFP_01187 7.74e-47 - - - - - - - -
PBONODFP_01188 1.43e-124 nudF 3.6.1.13 - L ko:K01515 ko00230,map00230 ko00000,ko00001,ko01000 ADP-ribose pyrophosphatase
PBONODFP_01189 3.46e-242 dapF 5.1.1.7 - E ko:K01778 ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
PBONODFP_01190 2.05e-20 - - - S - - - Protein of unknown function (DUF3021)
PBONODFP_01191 2.57e-47 - - - K - - - LytTr DNA-binding domain
PBONODFP_01192 1.47e-100 - - - U ko:K11051 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC-2 type transporter
PBONODFP_01193 5.17e-101 cylA - - V ko:K11050 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 abc transporter atp-binding protein
PBONODFP_01194 4.66e-153 ileS 6.1.1.5 - J ko:K01870 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
PBONODFP_01195 1.4e-259 cps4F - - M - - - Glycosyl transferases group 1
PBONODFP_01196 5.49e-163 tuaA - - M - - - Bacterial sugar transferase
PBONODFP_01197 1.62e-228 cps4D 5.1.3.2, 5.1.3.25 - M ko:K01784,ko:K17947 ko00052,ko00520,ko00523,ko01100,ko01130,map00052,map00520,map00523,map01100,map01130 ko00000,ko00001,ko00002,ko01000 RmlD substrate binding domain
PBONODFP_01198 2.25e-188 ywqE 3.1.3.48 - GM ko:K01104 - ko00000,ko01000 PHP domain protein
PBONODFP_01199 4.97e-157 ywqD - - D - - - Capsular exopolysaccharide family
PBONODFP_01200 8.45e-162 epsB - - M - - - biosynthesis protein
PBONODFP_01201 0.0 uvrC - - L ko:K03703 ko03420,map03420 ko00000,ko00001,ko03400 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
PBONODFP_01202 3.97e-173 glnQ 3.6.3.21 - E ko:K02028 - ko00000,ko00002,ko01000,ko02000 ABC transporter, ATP-binding protein
PBONODFP_01203 0.0 glnPH2 - - P ko:K02029,ko:K02030 - ko00000,ko00002,ko02000 ABC transporter permease
PBONODFP_01204 5.12e-31 - - - - - - - -
PBONODFP_01205 6.47e-95 - - - S - - - Iron-sulphur cluster biosynthesis
PBONODFP_01206 1.3e-65 - - - S - - - mazG nucleotide pyrophosphohydrolase
PBONODFP_01207 9.6e-143 engB - - D ko:K03978 - ko00000,ko03036 Necessary for normal cell division and for the maintenance of normal septation
PBONODFP_01208 7.8e-300 clpX - - O ko:K03544 ko04112,map04112 ko00000,ko00001,ko03110 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
PBONODFP_01209 3.75e-287 tig - - D ko:K03545 - ko00000 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
PBONODFP_01210 4.38e-286 tuf - - J ko:K02358,ko:K15771 ko02010,map02010 ko00000,ko00001,ko00002,ko02000,ko03012,ko03029,ko04147 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
PBONODFP_01211 5.89e-204 - - - S - - - Tetratricopeptide repeat
PBONODFP_01212 0.0 rnjB - - J ko:K12574 ko03018,map03018 ko00000,ko00001,ko01000,ko03019 An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PBONODFP_01213 5.25e-200 dapA 4.3.3.7 - E ko:K01714 ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
PBONODFP_01214 3.84e-262 - - - EGP - - - Major Facilitator Superfamily
PBONODFP_01215 2.9e-56 rpsO - - J ko:K02956 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
PBONODFP_01216 1.18e-46 rpsT - - J ko:K02968 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds directly to 16S ribosomal RNA
PBONODFP_01217 5.09e-241 holA 2.7.7.7 - L ko:K02340 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase III delta subunit
PBONODFP_01218 0.0 comEC - - S ko:K02238 - ko00000,ko00002,ko02044 Competence protein ComEC
PBONODFP_01219 7.1e-116 comEB 3.5.4.12 - F ko:K01493 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000,ko02044 ComE operon protein 2
PBONODFP_01220 2.56e-162 comEA - - L ko:K02237 - ko00000,ko00002,ko02044 Competence protein ComEA
PBONODFP_01221 4.27e-251 lon - - T ko:K07177 ko02024,map02024 ko00000,ko00001,ko01002 Belongs to the peptidase S16 family
PBONODFP_01222 2.99e-109 coaD 2.7.7.3 - H ko:K00954 ko00770,ko01100,map00770,map01100 ko00000,ko00001,ko00002,ko01000 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
PBONODFP_01223 4.98e-131 rsmD 2.1.1.171 - L ko:K08316 - ko00000,ko01000,ko03009 RNA methyltransferase, RsmD family
PBONODFP_01224 1.91e-66 ylbG - - S - - - Uncharacterized protein conserved in bacteria (DUF2129)
PBONODFP_01225 0.0 pyc 6.4.1.1 - C ko:K01958 ko00020,ko00620,ko00720,ko01100,ko01120,ko01200,ko01230,map00020,map00620,map00720,map01100,map01120,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
PBONODFP_01226 2.51e-261 ftsW - - D ko:K03588 ko04112,map04112 ko00000,ko00001,ko02000,ko03036 Belongs to the SEDS family
PBONODFP_01227 0.0 - - - - - - - -
PBONODFP_01228 0.0 icaA - - M - - - Glycosyl transferase family group 2
PBONODFP_01229 9.51e-135 - - - - - - - -
PBONODFP_01235 2.15e-106 - - - S - - - Phage transcriptional regulator, ArpU family
PBONODFP_01237 6.18e-18 - - - - - - - -
PBONODFP_01239 5.95e-06 - - - - - - - -
PBONODFP_01240 1.29e-83 - - - L - - - Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC
PBONODFP_01241 1.23e-71 - - - - - - - -
PBONODFP_01242 1.27e-64 - - - - - - - -
PBONODFP_01243 1.14e-202 - - - L - - - DnaD domain protein
PBONODFP_01244 5.04e-166 pi112 - - L - - - PDDEXK-like domain of unknown function (DUF3799)
PBONODFP_01245 5.03e-197 - - - L ko:K07455 - ko00000,ko03400 RecT family
PBONODFP_01246 5.03e-91 - - - - - - - -
PBONODFP_01247 7.73e-104 - - - - - - - -
PBONODFP_01248 6.59e-72 - - - - - - - -
PBONODFP_01250 4.61e-36 - - - K - - - Cro/C1-type HTH DNA-binding domain
PBONODFP_01251 5.68e-40 - - - K - - - Cro/C1-type HTH DNA-binding domain
PBONODFP_01253 2.06e-50 - - - K - - - Helix-turn-helix
PBONODFP_01254 1.32e-80 - - - K - - - Helix-turn-helix domain
PBONODFP_01255 6.43e-96 - - - E - - - IrrE N-terminal-like domain
PBONODFP_01256 1.87e-91 - - - - - - - -
PBONODFP_01258 7.9e-74 - - - - - - - -
PBONODFP_01261 4.23e-19 - - - S ko:K15051 - ko00000 DNA/RNA non-specific endonuclease
PBONODFP_01266 2.78e-44 - - - - - - - -
PBONODFP_01268 3.66e-276 int3 - - L - - - Belongs to the 'phage' integrase family
PBONODFP_01270 1.98e-40 - - - - - - - -
PBONODFP_01273 7.78e-76 - - - - - - - -
PBONODFP_01274 1.62e-53 - - - S - - - Phage gp6-like head-tail connector protein
PBONODFP_01277 0.0 - - - S ko:K06904 - ko00000 Caudovirus prohead serine protease
PBONODFP_01278 9.78e-257 - - - S - - - Phage portal protein
PBONODFP_01279 2.13e-05 - - - - - - - -
PBONODFP_01280 0.0 terL - - S - - - overlaps another CDS with the same product name
PBONODFP_01281 7.73e-109 - - - L - - - overlaps another CDS with the same product name
PBONODFP_01282 1.05e-88 - - - L - - - HNH endonuclease
PBONODFP_01283 1.87e-65 - - - S - - - Head-tail joining protein
PBONODFP_01284 1e-31 - - - - - - - -
PBONODFP_01286 1.09e-63 - - - S - - - Phage plasmid primase P4 family
PBONODFP_01287 1.88e-179 - - - L - - - DNA replication protein
PBONODFP_01288 2.62e-40 - - - - - - - -
PBONODFP_01290 2.12e-17 ansR - - K - - - Transcriptional regulator
PBONODFP_01291 3.6e-289 - - - L - - - Belongs to the 'phage' integrase family
PBONODFP_01292 1.28e-51 - - - - - - - -
PBONODFP_01293 9.28e-58 - - - - - - - -
PBONODFP_01294 1.27e-109 - - - K - - - MarR family
PBONODFP_01295 0.0 - - - D - - - nuclear chromosome segregation
PBONODFP_01296 3.02e-125 inlJ - - M - - - MucBP domain
PBONODFP_01297 1.23e-71 nanE 5.1.3.9 - G ko:K01788 ko00520,map00520 ko00000,ko00001,ko01000 Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
PBONODFP_01298 5.6e-292 - - - S - - - Pyridine nucleotide-disulphide oxidoreductase
PBONODFP_01299 2.43e-91 - - - S - - - Pyrimidine dimer DNA glycosylase
PBONODFP_01300 1.22e-115 - - - T - - - ECF transporter, substrate-specific component
PBONODFP_01301 1.06e-16 - - - - - - - -
PBONODFP_01302 1.96e-21 ytgB - - S - - - Transglycosylase associated protein
PBONODFP_01303 0.0 katA 1.11.1.6 - C ko:K03781 ko00380,ko00630,ko01110,ko01130,ko01200,ko04011,ko04016,ko04068,ko04146,ko04211,ko04212,ko04213,ko05014,map00380,map00630,map01110,map01130,map01200,map04011,map04016,map04068,map04146,map04211,map04212,map04213,map05014 ko00000,ko00001,ko00002,ko01000 Belongs to the catalase family
PBONODFP_01304 1.32e-101 nrp - - K ko:K16509 - ko00000 ArsC family
PBONODFP_01305 3.67e-174 - - - K ko:K07707 ko02020,ko02024,map02020,map02024 ko00000,ko00001,ko00002,ko02022 LytTr DNA-binding domain
PBONODFP_01306 2.56e-261 blpH 2.7.13.3 - T ko:K07706 ko02020,ko02024,map02020,map02024 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 GHKL domain
PBONODFP_01307 7.24e-23 - - - - - - - -
PBONODFP_01308 1.48e-95 - - - KOT ko:K07813 ko02020,ko02024,map02020,map02024 ko00000,ko00001,ko01002 May be involved in the proteolytic processing of a quorum sensing system signal molecule precursor
PBONODFP_01309 0.0 clpL - - O ko:K04086 - ko00000,ko03110 C-terminal, D2-small domain, of ClpB protein
PBONODFP_01311 1.97e-256 lctO 1.13.12.4 - C ko:K00467,ko:K10530 ko00620,map00620 ko00000,ko00001,ko01000 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases
PBONODFP_01312 0.0 pox4 1.2.3.3 - EH ko:K00158 ko00620,ko01100,map00620,map01100 ko00000,ko00001,ko01000 Belongs to the TPP enzyme family
PBONODFP_01313 5.03e-95 - - - K - - - Transcriptional regulator
PBONODFP_01314 0.0 spxB 1.2.3.3 - EH ko:K00158 ko00620,ko01100,map00620,map01100 ko00000,ko00001,ko01000 Belongs to the TPP enzyme family
PBONODFP_01315 4.04e-94 yueI - - S - - - Protein of unknown function (DUF1694)
PBONODFP_01316 1.45e-162 - - - S - - - Membrane
PBONODFP_01317 1.31e-210 rhaD 4.1.2.19 - H ko:K01629 ko00040,ko00051,ko01120,map00040,map00051,map01120 ko00000,ko00001,ko01000 Catalyzes the reversible cleavage of L-rhamnulose-1- phosphate to dihydroxyacetone phosphate (DHAP) and L-lactaldehyde
PBONODFP_01318 0.0 rhaA 2.7.1.5, 5.3.1.14 - G ko:K00848,ko:K01813 ko00040,ko00051,ko01120,map00040,map00051,map01120 ko00000,ko00001,ko01000 L-rhamnose isomerase (RhaA)
PBONODFP_01319 4.22e-74 rhaM 5.1.3.32 - G ko:K03534 - ko00000,ko01000 Involved in the anomeric conversion of L-rhamnose
PBONODFP_01320 0.0 rhaB 2.7.1.5 - F ko:K00848 ko00040,ko00051,ko01120,map00040,map00051,map01120 ko00000,ko00001,ko01000 Involved in the catabolism of L-rhamnose (6-deoxy-L- mannose). Catalyzes the transfer of the gamma-phosphate group from ATP to the 1-hydroxyl group of L-rhamnulose to yield L-rhamnulose 1-phosphate
PBONODFP_01321 6.57e-311 iolF - - P ko:K06610 - ko00000,ko02000 Sugar (and other) transporter
PBONODFP_01322 8.35e-230 rhaR - - K - - - helix_turn_helix, arabinose operon control protein
PBONODFP_01323 6.08e-179 - - - K - - - DeoR C terminal sensor domain
PBONODFP_01324 3.71e-105 pts36A 2.7.1.200 - G ko:K02773 ko00052,ko01100,ko02060,map00052,map01100,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PBONODFP_01325 3e-08 - 2.7.1.200 - G ko:K02774 ko00052,ko01100,ko02060,map00052,map01100,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system, Lactose/Cellobiose specific IIB subunit
PBONODFP_01326 1.53e-222 - - - L ko:K07482 - ko00000 PFAM Integrase, catalytic core
PBONODFP_01328 1.44e-153 dpnM 2.1.1.72 - H ko:K06223 ko03430,map03430 ko00000,ko00001,ko01000,ko02048,ko03032,ko03400 Site-specific DNA-methyltransferase (adenine-specific)
PBONODFP_01329 3.19e-62 - - - - - - - -
PBONODFP_01330 1.04e-51 tnpA1 - - L - - - PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
PBONODFP_01331 2.54e-31 tnpA1 - - L - - - PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
PBONODFP_01332 2.53e-209 rbsU - - U ko:K06216 - ko00000,ko02000 ribose uptake protein RbsU
PBONODFP_01333 4.99e-88 rbsD 5.4.99.62 - G ko:K06726 ko02010,map02010 ko00000,ko00001,ko01000 Catalyzes the interconversion of beta-pyran and beta- furan forms of D-ribose
PBONODFP_01334 7.82e-210 rbsK 2.7.1.15 - H ko:K00852 ko00030,map00030 ko00000,ko00001,ko01000 Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PBONODFP_01335 4.04e-241 rbsR - - K ko:K02529,ko:K03484 - ko00000,ko03000 helix_turn _helix lactose operon repressor
PBONODFP_01336 0.0 adhE 1.1.1.1, 1.2.1.10 - C ko:K04072 ko00010,ko00071,ko00350,ko00620,ko00625,ko00626,ko00650,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00620,map00625,map00626,map00650,map01100,map01110,map01120,map01130,map01220 ko00000,ko00001,ko01000 belongs to the iron- containing alcohol dehydrogenase family
PBONODFP_01337 2.51e-103 - - - T - - - Universal stress protein family
PBONODFP_01338 7.43e-130 padR - - K - - - Virulence activator alpha C-term
PBONODFP_01339 2.71e-135 padC - - Q ko:K13727 - ko00000,ko01000 Phenolic acid decarboxylase
PBONODFP_01340 1.13e-182 mhpD - - Q ko:K02509 ko00350,ko01120,map00350,map01120 ko00000,ko00001,ko01000 hydratase
PBONODFP_01341 3.66e-113 - - - K - - - Acetyltransferase (GNAT) domain
PBONODFP_01342 6.95e-204 degV1 - - S - - - DegV family
PBONODFP_01343 1.43e-80 - - - K - - - Bacteriophage CI repressor helix-turn-helix domain
PBONODFP_01344 0.0 pepE 3.4.22.40 - E ko:K01372 - ko00000,ko01000,ko01002 aminopeptidase
PBONODFP_01346 2.76e-141 sip3 3.4.21.89 - U ko:K03100 ko02024,ko03060,map02024,map03060 ko00000,ko00001,ko01000,ko01002 Belongs to the peptidase S26 family
PBONODFP_01347 0.0 - - - - - - - -
PBONODFP_01349 2.23e-211 - - - S - - - Bacterial protein of unknown function (DUF916)
PBONODFP_01350 3.74e-143 - - - S - - - Cell surface protein
PBONODFP_01351 0.0 gidA - - D ko:K03495 - ko00000,ko03016,ko03036 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
PBONODFP_01352 0.0 mnmE - - S ko:K03650 - ko00000,ko01000,ko03016 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
PBONODFP_01353 2.37e-173 jag - - S ko:K06346 - ko00000 R3H domain protein
PBONODFP_01354 2.26e-306 - - - Q - - - Imidazolonepropionase and related amidohydrolases
PBONODFP_01355 0.0 oppA - - E ko:K02035,ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter, substratebinding protein
PBONODFP_01356 1.55e-158 yidC - - U ko:K03217 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044,ko03029 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PBONODFP_01357 3.74e-75 rnpA 3.1.26.5 - J ko:K03536 - ko00000,ko01000,ko03016 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
PBONODFP_01358 0.0 dnaA - - L ko:K02313 ko02020,ko04112,map02020,map04112 ko00000,ko00001,ko03032,ko03036 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
PBONODFP_01359 8.19e-267 dnaN 2.7.7.7 - L ko:K02338 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
PBONODFP_01360 3.82e-51 yaaA - - S ko:K14761 - ko00000,ko03009 S4 domain protein YaaA
PBONODFP_01361 2.95e-262 recF - - L ko:K03629 ko03440,map03440 ko00000,ko00001,ko03400 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
PBONODFP_01362 0.0 gyrB 5.99.1.3 - L ko:K02470 - ko00000,ko01000,ko03032,ko03400 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PBONODFP_01363 0.0 gyrA 5.99.1.3 - L ko:K02469 - ko00000,ko01000,ko03032,ko03400 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PBONODFP_01364 5.95e-65 rpsF - - J ko:K02990 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011,ko03029 Binds together with S18 to 16S ribosomal RNA
PBONODFP_01365 4.81e-108 ssb - - L ko:K03111 ko03030,ko03430,ko03440,map03030,map03430,map03440 ko00000,ko00001,ko03029,ko03032,ko03400 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
PBONODFP_01366 2.69e-47 rpsR - - J ko:K02963 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
PBONODFP_01367 0.0 yybT - - T - - - signaling protein consisting of a modified GGDEF domain and a DHH domain
PBONODFP_01368 3.44e-95 rplI - - J ko:K02939 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds to the 23S rRNA
PBONODFP_01369 8.77e-317 dnaB 3.6.4.12 - L ko:K02314 ko03030,ko04112,map03030,map04112 ko00000,ko00001,ko01000,ko03032 Participates in initiation and elongation during chromosome replication
PBONODFP_01370 4.96e-289 yttB - - EGP - - - Major Facilitator
PBONODFP_01371 9e-184 proB 2.7.2.11 - F ko:K00931 ko00330,ko00332,ko01100,ko01130,ko01230,map00330,map00332,map01100,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
PBONODFP_01372 3.25e-292 proA 1.2.1.41 - E ko:K00147 ko00330,ko00332,ko01100,ko01110,ko01130,ko01230,map00330,map00332,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
PBONODFP_01374 0.0 oppA - - E ko:K02035,ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter, substratebinding protein
PBONODFP_01376 0.0 glgB 2.4.1.18 CBM48,GH13 G ko:K00700 ko00500,ko01100,ko01110,map00500,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko04147 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
PBONODFP_01377 6.65e-282 glgC 2.7.7.27 - H ko:K00975 ko00500,ko00520,ko01100,ko01110,ko02026,map00500,map00520,map01100,map01110,map02026 ko00000,ko00001,ko00002,ko01000 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
PBONODFP_01378 3.49e-269 glgD 2.7.7.27 - G ko:K00975 ko00500,ko00520,ko01100,ko01110,ko02026,map00500,map00520,map01100,map01110,map02026 ko00000,ko00001,ko00002,ko01000 Nucleotidyl transferase
PBONODFP_01379 0.0 glgA 2.4.1.21 GT5 F ko:K00703 ko00500,ko01100,ko01110,ko02026,map00500,map01100,map01110,map02026 ko00000,ko00001,ko00002,ko01000,ko01003 Synthesizes alpha-1,4-glucan chains using ADP-glucose
PBONODFP_01380 0.0 glgP 2.4.1.1 GT35 G ko:K00688 ko00500,ko01100,ko01110,ko02026,ko04217,ko04910,ko04922,ko04931,map00500,map01100,map01110,map02026,map04217,map04910,map04922,map04931 ko00000,ko00001,ko01000 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
PBONODFP_01381 0.0 malZ 3.2.1.20, 3.2.1.41 CBM48,GH13,GH31 G ko:K01187,ko:K01200 ko00052,ko00500,ko01100,ko01110,map00052,map00500,map01100,map01110 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 13 family
PBONODFP_01383 8.38e-184 - - - S - - - haloacid dehalogenase-like hydrolase
PBONODFP_01384 4.47e-154 pgmB 5.4.2.6 - S ko:K01838 ko00500,map00500 ko00000,ko00001,ko01000 beta-phosphoglucomutase
PBONODFP_01385 0.0 trePP 2.4.1.216, 2.4.1.8 GH65 G ko:K00691,ko:K03731 ko00500,ko01100,map00500,map01100 ko00000,ko00001,ko01000 Glycosyl hydrolase family 65 central catalytic domain
PBONODFP_01386 3.21e-104 - - - S - - - Pyridoxamine 5'-phosphate oxidase
PBONODFP_01387 1.78e-42 cspL - - K ko:K03704 - ko00000,ko03000 Cold shock protein domain
PBONODFP_01388 2.54e-50 - - - - - - - -
PBONODFP_01390 2.22e-169 yycF - - K ko:K07668 ko02020,map02020 ko00000,ko00001,ko00002,ko02022 response regulator
PBONODFP_01391 0.0 vicK 2.7.13.3 - T ko:K07652 ko02020,map02020 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Histidine kinase
PBONODFP_01392 3.55e-313 yycH - - S - - - YycH protein
PBONODFP_01393 3.54e-195 yycI - - S - - - YycH protein
PBONODFP_01394 1.71e-200 vicX 3.1.26.11 - S ko:K00784 ko03013,map03013 ko00000,ko00001,ko01000,ko03016 domain protein
PBONODFP_01395 1.5e-253 htrA 3.4.21.107 - O ko:K04771 ko01503,ko02020,map01503,map02020 ko00000,ko00001,ko00002,ko01000,ko01002,ko03110 serine protease
PBONODFP_01396 6.08e-107 rlmH 2.1.1.177 - J ko:K00783 - ko00000,ko01000,ko03009 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
PBONODFP_01397 2e-123 - - - K - - - Bacterial regulatory proteins, tetR family
PBONODFP_01398 0.0 - - - C - - - Belongs to the aldehyde dehydrogenase family
PBONODFP_01399 5.17e-91 B4168_4126 - - L ko:K07493 - ko00000 Transposase
PBONODFP_01400 2.93e-234 - - - E - - - GDSL-like Lipase/Acylhydrolase family
PBONODFP_01401 3.55e-164 - - - S - - - Gram-negative-bacterium-type cell wall biogenesis
PBONODFP_01402 4.16e-175 menG 2.1.1.163, 2.1.1.201 - H ko:K03183 ko00130,ko01100,ko01110,map00130,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
PBONODFP_01403 1.24e-232 ywbN - - P ko:K07223,ko:K16301 - ko00000,ko01000,ko02000 Peroxidase
PBONODFP_01404 6.25e-132 - - - K - - - transcriptional regulator
PBONODFP_01405 1.13e-204 - - - S ko:K07045 - ko00000 Amidohydrolase
PBONODFP_01406 1.22e-68 - - - S - - - Uncharacterized protein conserved in bacteria (DUF2316)
PBONODFP_01407 8.86e-139 - - - - - - - -
PBONODFP_01409 9.96e-82 - - - - - - - -
PBONODFP_01410 6.18e-71 - - - - - - - -
PBONODFP_01411 2.04e-107 - - - M - - - PFAM NLP P60 protein
PBONODFP_01412 0.0 gadB 4.1.1.15, 4.1.2.27 - E ko:K01580,ko:K01634 ko00250,ko00410,ko00430,ko00600,ko00650,ko01100,ko01110,ko01120,ko02024,ko04071,ko04727,ko04940,map00250,map00410,map00430,map00600,map00650,map01100,map01110,map01120,map02024,map04071,map04727,map04940 ko00000,ko00001,ko00002,ko01000 Belongs to the group II decarboxylase family
PBONODFP_01413 4.45e-38 - - - - - - - -
PBONODFP_01414 0.0 pckA 4.1.1.49 - H ko:K01610 ko00010,ko00020,ko00620,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00710,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Phosphoenolpyruvate carboxykinase
PBONODFP_01415 3.81e-150 - - - K - - - Bacterial regulatory proteins, tetR family
PBONODFP_01416 5.33e-114 - - - K - - - Winged helix DNA-binding domain
PBONODFP_01417 3.28e-176 yesN - - T ko:K07720 ko02020,map02020 ko00000,ko00001,ko00002,ko02022 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
PBONODFP_01418 5.48e-171 - - - S - - - WxL domain surface cell wall-binding
PBONODFP_01419 1.36e-245 - - - S - - - Bacterial protein of unknown function (DUF916)
PBONODFP_01420 0.0 - - - - - - - -
PBONODFP_01421 2.41e-212 - - - S - - - Protein of unknown function (DUF1002)
PBONODFP_01422 1.58e-66 - - - - - - - -
PBONODFP_01423 6.47e-124 - - - K ko:K22041 - ko00000,ko03000 transcriptional regulator
PBONODFP_01424 5.94e-118 ymdB - - S - - - Macro domain protein
PBONODFP_01425 2.69e-190 uppP 3.6.1.27 - V ko:K06153 ko00550,map00550 ko00000,ko00001,ko01000,ko01011 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
PBONODFP_01426 1.05e-56 - - - S - - - Protein of unknown function (DUF1093)
PBONODFP_01427 2.93e-102 - - - S - - - Threonine/Serine exporter, ThrE
PBONODFP_01428 2.57e-171 - - - S - - - Putative threonine/serine exporter
PBONODFP_01429 1.36e-209 yvgN - - C - - - Aldo keto reductase
PBONODFP_01430 2.8e-205 ywkB - - S ko:K07088 - ko00000 Membrane transport protein
PBONODFP_01431 0.0 yfkN 3.1.3.6, 3.1.4.16 - F ko:K01119 ko00230,ko00240,map00230,map00240 ko00000,ko00001,ko01000 Belongs to the 5'-nucleotidase family
PBONODFP_01432 0.0 pacL3 3.6.3.8 - P ko:K01537 - ko00000,ko01000 Cation transporter/ATPase, N-terminus
PBONODFP_01433 1.14e-110 - - - F - - - Nucleoside 2-deoxyribosyltransferase
PBONODFP_01434 0.0 ubiB - - S ko:K03688 - ko00000 ABC1 family
PBONODFP_01435 0.0 brnQ - - U ko:K03311 - ko00000 Component of the transport system for branched-chain amino acids
PBONODFP_01436 0.0 lacS - - G ko:K11104,ko:K16209 - ko00000,ko02000 Transporter
PBONODFP_01437 0.0 lacA 3.2.1.23 - G ko:K12308 ko00052,map00052 ko00000,ko00001,ko01000 -beta-galactosidase
PBONODFP_01438 9.55e-242 lacR - - K ko:K02529 - ko00000,ko03000 Transcriptional regulator
PBONODFP_01439 0.0 - 3.2.1.40 - G ko:K05989 - ko00000,ko01000 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain
PBONODFP_01440 5.02e-294 - - - P ko:K06610 - ko00000,ko02000 Sugar (and other) transporter
PBONODFP_01441 0.0 ram2 3.2.1.40 - G ko:K05989 - ko00000,ko01000 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain
PBONODFP_01442 1.45e-297 - - - P ko:K06610 - ko00000,ko02000 Major Facilitator Superfamily
PBONODFP_01443 1.29e-235 - - - K - - - helix_turn_helix, arabinose operon control protein
PBONODFP_01444 3.9e-143 fic - - D ko:K04095 - ko00000,ko03036 Fic/DOC family
PBONODFP_01445 3.4e-100 - - - K ko:K07726 - ko00000,ko03000 Helix-turn-helix XRE-family like proteins
PBONODFP_01446 1.19e-234 galR - - K ko:K02529 - ko00000,ko03000 Transcriptional regulator
PBONODFP_01447 0.0 galT 2.7.7.12 - G ko:K00965 ko00052,ko00520,ko01100,ko04917,map00052,map00520,map01100,map04917 ko00000,ko00001,ko00002,ko01000 UDP-glucose--hexose-1-phosphate uridylyltransferase
PBONODFP_01448 5.14e-245 galE 5.1.3.2 - M ko:K01784 ko00052,ko00520,ko01100,map00052,map00520,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the NAD(P)-dependent epimerase dehydratase family
PBONODFP_01449 1.65e-286 galK 2.7.1.6 - F ko:K00849 ko00052,ko00520,ko01100,map00052,map00520,map01100 ko00000,ko00001,ko00002,ko01000,ko04147 Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
PBONODFP_01450 0.0 lacL 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 2 family
PBONODFP_01451 1.64e-238 lacM 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 beta-galactosidase
PBONODFP_01452 0.0 melA 3.2.1.22 - G ko:K07407 ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603 ko00000,ko00001,ko01000 alpha-galactosidase
PBONODFP_01453 0.0 lacP - - G ko:K11104,ko:K16209 - ko00000,ko02000 Transporter
PBONODFP_01454 3.51e-252 galM3 5.1.3.3 - G ko:K01785 ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the interconversion of alpha and beta anomers of maltose
PBONODFP_01455 3.69e-232 galR - - K ko:K02529 - ko00000,ko03000 Transcriptional regulator
PBONODFP_01456 8.93e-249 tas3 - - C ko:K19265 - ko00000,ko01000 Aldo keto reductase family protein
PBONODFP_01457 0.0 gshR 1.8.1.7 - C ko:K00383 ko00480,ko04918,map00480,map04918 ko00000,ko00001,ko01000 Pyridine nucleotide-disulphide oxidoreductase
PBONODFP_01458 1.1e-229 proV - - E ko:K05847 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter, ATP-binding protein
PBONODFP_01459 0.0 proWX - - EM ko:K05845,ko:K05846 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Periplasmic glycine betaine choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)
PBONODFP_01460 1.94e-100 - 3.1.26.4 - L ko:K03469 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 RNA-DNA hybrid ribonuclease activity
PBONODFP_01461 4.01e-206 yneD - - S - - - Belongs to the short-chain dehydrogenases reductases (SDR) family
PBONODFP_01462 6.07e-223 rihA 3.2.2.1 - F ko:K01239,ko:K01250,ko:K12700 ko00230,ko00760,ko01100,map00230,map00760,map01100 ko00000,ko00001,ko01000 Nucleoside
PBONODFP_01463 2.43e-103 accB3 - - I ko:K02160 ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212 ko00000,ko00001,ko00002 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
PBONODFP_01464 1.52e-103 - - - - - - - -
PBONODFP_01465 5.89e-108 - - - K - - - Winged helix-turn-helix transcription repressor, HrcA DNA-binding
PBONODFP_01466 1.61e-294 - - - N ko:K09384 - ko00000 Uncharacterized conserved protein (DUF2075)
PBONODFP_01467 1.31e-124 yxkA - - S ko:K06910 - ko00000 Phosphatidylethanolamine-binding protein
PBONODFP_01468 5.34e-72 - - - S ko:K08987 - ko00000 Protein of unknown function (DUF1304)
PBONODFP_01469 0.0 sufI - - Q - - - Multicopper oxidase
PBONODFP_01470 7.16e-155 rpiA2 5.3.1.6 - G ko:K01807 ko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
PBONODFP_01471 1.05e-132 zmp1 - - O - - - Zinc-dependent metalloprotease
PBONODFP_01472 8.95e-60 - - - - - - - -
PBONODFP_01473 9e-227 hicD1 1.1.1.27 - C ko:K00016 ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922 ko00000,ko00001,ko01000,ko04147 Belongs to the LDH MDH superfamily
PBONODFP_01474 4.08e-306 amt - - P ko:K03320 - ko00000,ko02000 ammonium transporter
PBONODFP_01475 0.0 - - - P - - - Major Facilitator Superfamily
PBONODFP_01476 2.24e-112 - - - K - - - Transcriptional regulator PadR-like family
PBONODFP_01477 3.93e-59 - - - - - - - -
PBONODFP_01478 9.42e-258 tagH 3.6.3.40 - GM ko:K09693 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 Part of the ABC transporter complex TagGH involved in teichoic acids export. Responsible for energy coupling to the transport system
PBONODFP_01479 1.64e-198 tagG - - U ko:K09692 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Transport permease protein
PBONODFP_01480 1.1e-280 - - - - - - - -
PBONODFP_01481 2.25e-286 mtnE - - E ko:K08969 ko00270,ko01100,map00270,map01100 ko00000,ko00001,ko00002,ko01000,ko01007 Aminotransferase
PBONODFP_01482 1.14e-186 ykpB 1.1.1.169 - H ko:K00077 ko00770,ko01100,ko01110,map00770,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
PBONODFP_01483 4.45e-116 metP_2 - - U ko:K02072 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
PBONODFP_01484 7.98e-158 metN - - P ko:K02071 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
PBONODFP_01485 1.06e-143 metQ - - P ko:K02073 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 NLPA lipoprotein
PBONODFP_01486 1.45e-79 - - - S - - - CHY zinc finger
PBONODFP_01487 1.49e-227 birA 6.3.4.15 - H ko:K03524 ko00780,ko01100,map00780,map01100 ko00000,ko00001,ko01000,ko03000 Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
PBONODFP_01488 1.54e-123 bioY - - S ko:K03523 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 BioY family
PBONODFP_01489 9.51e-203 glxR 1.1.1.31 - I ko:K00020 ko00280,ko01100,map00280,map01100 ko00000,ko00001,ko01000 Dehydrogenase
PBONODFP_01490 1.01e-176 yceF - - P ko:K05794 - ko00000 membrane
PBONODFP_01491 6.8e-123 - 2.3.1.79 - S ko:K00661 - ko00000,ko01000 Maltose acetyltransferase
PBONODFP_01492 3.38e-252 hisC 2.6.1.9 - E ko:K00817 ko00340,ko00350,ko00360,ko00400,ko00401,ko00960,ko01100,ko01110,ko01130,ko01230,map00340,map00350,map00360,map00400,map00401,map00960,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
PBONODFP_01493 5.11e-67 hisE 3.6.1.31 - E ko:K01523 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 phosphoribosyl-ATP diphosphatase activity
PBONODFP_01494 2.49e-77 hisI 3.5.4.19, 3.6.1.31 - E ko:K01496,ko:K11755 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
PBONODFP_01495 1.27e-172 hisF - - E ko:K02500 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
PBONODFP_01496 6.84e-166 hisA 5.3.1.16 - E ko:K01814 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
PBONODFP_01497 2.23e-142 hisH - - E ko:K02501 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
PBONODFP_01498 2.46e-139 hisB 4.2.1.19 - E ko:K01693 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 imidazoleglycerol-phosphate dehydratase
PBONODFP_01499 4.51e-298 hisD 1.1.1.23 - E ko:K00013 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
PBONODFP_01500 1.69e-151 hisG 2.4.2.17 - F ko:K00765,ko:K02502 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity
PBONODFP_01501 1.09e-273 hisZ - - E ko:K02502 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002 Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
PBONODFP_01502 6.46e-208 hisK 3.1.3.15 - E ko:K04486 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Histidinol phosphate phosphatase, HisJ
PBONODFP_01503 1.07e-282 ysaA - - V - - - RDD family
PBONODFP_01504 7.28e-213 corA - - P ko:K03284 - ko00000,ko02000 CorA-like Mg2+ transporter protein
PBONODFP_01505 1.71e-67 - - - S - - - Domain of unknown function (DU1801)
PBONODFP_01506 2.54e-17 rmeB - - K - - - transcriptional regulator, MerR family
PBONODFP_01507 1.69e-255 asd 1.2.1.11 - E ko:K00133 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
PBONODFP_01508 4.7e-237 yxeI 3.5.1.24 - M ko:K01442 ko00120,ko00121,ko01100,map00120,map00121,map01100 ko00000,ko00001,ko01000 Linear amide C-N hydrolase, choloylglycine hydrolase family protein
PBONODFP_01509 1.45e-46 - - - - - - - -
PBONODFP_01510 3.1e-144 - - - S - - - Protein of unknown function (DUF1211)
PBONODFP_01511 0.0 ydgH - - S ko:K06994 - ko00000 MMPL family
PBONODFP_01512 0.0 - - - M - - - domain protein
PBONODFP_01513 3e-98 yjcF - - S - - - Acetyltransferase (GNAT) domain
PBONODFP_01514 0.0 ltaS 2.7.8.20 - M ko:K19005 ko00561,ko01100,map00561,map01100 ko00000,ko00001,ko01000 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
PBONODFP_01515 0.0 glpQ4 3.1.4.46 - C ko:K01126 ko00564,map00564 ko00000,ko00001,ko01000 phosphodiesterase
PBONODFP_01516 4.01e-236 yumC 1.18.1.2, 1.19.1.1 - C ko:K21567 - ko00000,ko01000 Ferredoxin--NADP reductase
PBONODFP_01517 2.14e-183 - - - S - - - Alpha/beta hydrolase of unknown function (DUF915)
PBONODFP_01518 7.79e-18 nanE 5.1.3.9 - G ko:K01788 ko00520,map00520 ko00000,ko00001,ko01000 Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
PBONODFP_01519 3.44e-262 araR - - K ko:K02103 - ko00000,ko03000 Transcriptional regulator
PBONODFP_01520 0.0 araP - - U - - - Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family
PBONODFP_01521 0.0 araB 2.7.1.16 - G ko:K00853 ko00040,ko01100,map00040,map01100 ko00000,ko00001,ko01000 carbohydrate kinase FGGY
PBONODFP_01522 8.71e-175 araD 5.1.3.4 - G ko:K03077 ko00040,ko00053,ko01100,ko01120,map00040,map00053,map01100,map01120 ko00000,ko00001,ko00002,ko01000 links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source
PBONODFP_01523 0.0 araA 5.3.1.4 - G ko:K01804 ko00040,ko01100,map00040,map01100 ko00000,ko00001,ko01000 Catalyzes the conversion of L-arabinose to L-ribulose
PBONODFP_01524 6.83e-133 maa 2.3.1.79 - S ko:K00661 - ko00000,ko01000 Maltose O-acetyltransferase
PBONODFP_01525 1.73e-93 - - - S - - - Protein of unknown function (DUF1694)
PBONODFP_01526 0.0 xfp 4.1.2.22, 4.1.2.9 - G ko:K01621 ko00030,ko00710,ko01100,ko01120,map00030,map00710,map01100,map01120 ko00000,ko00001,ko01000 Phosphoketolase
PBONODFP_01527 2.05e-159 - - - K ko:K02444 - ko00000,ko03000 DeoR C terminal sensor domain
PBONODFP_01528 3.99e-106 - 2.7.1.200, 2.7.1.204 - G ko:K02773,ko:K20112 ko00052,ko01100,ko02060,map00052,map01100,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PBONODFP_01529 6e-60 - 2.7.1.200 - G ko:K02774 ko00052,ko01100,ko02060,map00052,map01100,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system, Lactose/Cellobiose specific IIB subunit
PBONODFP_01530 8.37e-296 gatC - - G ko:K02775 ko00052,ko01100,ko02060,map00052,map01100,map02060 ko00000,ko00001,ko00002,ko02000 PTS system sugar-specific permease component
PBONODFP_01531 7.47e-247 - 1.1.1.14 - C ko:K00008 ko00040,ko00051,ko01100,map00040,map00051,map01100 ko00000,ko00001,ko00002,ko01000 Zinc-binding dehydrogenase
PBONODFP_01532 1.54e-310 - - - K ko:K02538 - ko00000,ko03000 PRD domain
PBONODFP_01533 2.28e-08 - - - H - - - Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PBONODFP_01534 1.91e-98 - 2.7.1.202 - G ko:K02768 ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PBONODFP_01535 6.25e-63 - 2.7.1.202 - G ko:K02769 ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system, Lactose/Cellobiose specific IIB subunit
PBONODFP_01536 3.64e-224 - - - G ko:K02770 ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060 ko00000,ko00001,ko00002,ko02000 Phosphotransferase System
PBONODFP_01537 4.66e-164 alsE - - G ko:K17195 ko00051,ko01120,map00051,map01120 ko00000,ko00001,ko01000 Ribulose-phosphate 3 epimerase family
PBONODFP_01538 8.34e-147 tal 2.2.1.2 - F ko:K00616 ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
PBONODFP_01539 0.0 tkt 2.2.1.1 - H ko:K00615 ko00030,ko00710,ko01051,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01051,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
PBONODFP_01540 2.58e-186 yxeH - - S - - - hydrolase
PBONODFP_01541 2.83e-237 cbh 3.5.1.24 - M ko:K01442 ko00120,ko00121,ko01100,map00120,map00121,map01100 ko00000,ko00001,ko01000 Linear amide C-N hydrolase, choloylglycine hydrolase family protein
PBONODFP_01543 0.0 agl 3.2.1.20 GH31 G ko:K01187 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 31 family
PBONODFP_01544 0.0 - - - G ko:K16211 - ko00000,ko02000 Major Facilitator
PBONODFP_01545 3.1e-221 cytR - - K ko:K02529,ko:K03604 - ko00000,ko03000 Transcriptional regulator, LacI family
PBONODFP_01546 1.71e-59 - - - S - - - pyridoxamine 5-phosphate
PBONODFP_01547 0.0 - 1.3.5.4 - C ko:K00244 ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020 ko00000,ko00001,ko00002,ko01000 FAD binding domain
PBONODFP_01548 1.23e-228 apbE3 2.7.1.180 - H ko:K03734 - ko00000,ko01000 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
PBONODFP_01549 2.2e-173 aroD 4.2.1.10 - E ko:K03785 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis-dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3- dehydroshikimate
PBONODFP_01550 4.57e-212 aroE 1.1.1.25 - E ko:K00014 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
PBONODFP_01551 4.62e-224 - - - K - - - Transcriptional regulator, LysR family
PBONODFP_01552 1.4e-282 - - - EGP - - - Major Facilitator Superfamily
PBONODFP_01553 1.2e-207 aroE 1.1.1.25 - E ko:K00014 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
PBONODFP_01554 6.68e-205 aroE 1.1.1.25 - E ko:K00014 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
PBONODFP_01555 1.64e-202 - 1.1.1.100 - IQ ko:K00059 ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 Enoyl-(Acyl carrier protein) reductase
PBONODFP_01556 5.56e-212 - - - G - - - Xylose isomerase-like TIM barrel
PBONODFP_01557 1.73e-215 - - - K - - - Transcriptional regulator, LysR family
PBONODFP_01558 1.12e-262 - - - EGP - - - Major Facilitator Superfamily
PBONODFP_01559 2.09e-83 - - - - - - - -
PBONODFP_01560 2.63e-200 estA - - S - - - Putative esterase
PBONODFP_01561 3.15e-173 - - - K - - - UTRA domain
PBONODFP_01562 1.87e-316 pts29C - - G ko:K02761 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko02000 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PBONODFP_01563 1.62e-207 murQ 4.2.1.126 - G ko:K07106 ko00520,ko01100,map00520,map01100 ko00000,ko00001,ko01000 Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
PBONODFP_01564 1.69e-202 - - - G - - - BadF/BadG/BcrA/BcrD ATPase family
PBONODFP_01565 7.57e-268 - - - S ko:K09963 - ko00000 Bacterial protein of unknown function (DUF871)
PBONODFP_01566 0.0 bglH 3.2.1.86 GT1 G ko:K01223 ko00010,ko00500,map00010,map00500 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 1 family
PBONODFP_01567 0.0 bglP - - G ko:K02755,ko:K02756,ko:K02757 ko02060,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 phosphotransferase system
PBONODFP_01568 3.72e-200 bglG4 - - K ko:K03488 - ko00000,ko03000 CAT RNA binding domain
PBONODFP_01569 0.0 pbg9 3.2.1.86 GT1 G ko:K01223 ko00010,ko00500,map00010,map00500 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 1 family
PBONODFP_01570 0.0 bglH 3.2.1.86 GT1 G ko:K01223 ko00010,ko00500,map00010,map00500 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 1 family
PBONODFP_01571 0.0 pts33BCA - - G ko:K02755,ko:K02756,ko:K02757 ko02060,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 phosphotransferase system
PBONODFP_01572 1.07e-202 bglG5 - - K ko:K03488 - ko00000,ko03000 CAT RNA binding domain
PBONODFP_01573 3.21e-115 treP 2.4.1.64 GH65 G ko:K05342 ko00500,ko01100,map00500,map01100 ko00000,ko00001,ko01000 hydrolase, family 65, central catalytic
PBONODFP_01574 0.0 carB 6.3.5.5 - F ko:K01955 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Carbamoyl-phosphate synthase
PBONODFP_01575 9.1e-261 carA 6.3.5.5 - F ko:K01956 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Carbamoyl-phosphate synthetase glutamine chain
PBONODFP_01576 1.04e-243 argC 1.2.1.38 - E ko:K00145 ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
PBONODFP_01577 3.39e-294 argJ 2.3.1.1, 2.3.1.35 - E ko:K00620 ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
PBONODFP_01578 2.36e-166 argB 2.7.2.8 - F ko:K00930 ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the acetylglutamate kinase family. ArgB subfamily
PBONODFP_01579 4.66e-278 argD 2.6.1.11, 2.6.1.17 - E ko:K00821 ko00220,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00220,map00300,map01100,map01110,map01120,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 acetylornithine
PBONODFP_01580 2.63e-241 argF 2.1.3.3 - E ko:K00611 ko00220,ko01100,ko01110,ko01130,ko01230,map00220,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
PBONODFP_01581 1.3e-110 queT - - S - - - QueT transporter
PBONODFP_01582 4.87e-148 - - - S - - - (CBS) domain
PBONODFP_01583 0.0 - - - S - - - Putative peptidoglycan binding domain
PBONODFP_01584 1.13e-225 ldh 1.1.1.27 - C ko:K00016 ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922 ko00000,ko00001,ko01000,ko04147 Belongs to the LDH MDH superfamily. LDH family
PBONODFP_01585 8.29e-129 pth 3.1.1.29 - J ko:K01056 - ko00000,ko01000,ko03012 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
PBONODFP_01586 0.0 mfd - - L ko:K03723 ko03420,map03420 ko00000,ko00001,ko01000,ko03400 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
PBONODFP_01587 0.0 yabM - - S ko:K03328 - ko00000 Polysaccharide biosynthesis protein
PBONODFP_01588 7.72e-57 yabO - - J - - - S4 domain protein
PBONODFP_01590 2.02e-83 divIC - - D ko:K13052 - ko00000,ko03036 Septum formation initiator
PBONODFP_01591 1.07e-103 yabR - - J ko:K07571 - ko00000 RNA binding
PBONODFP_01592 0.0 tilS 2.4.2.8, 6.3.4.19 - J ko:K04075,ko:K15780 ko00230,ko01100,ko01110,map00230,map01100,map01110 ko00000,ko00001,ko01000,ko03016 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
PBONODFP_01593 4.3e-124 hpt 2.4.2.8 - F ko:K00760 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 ko00000,ko00001,ko01000 Belongs to the purine pyrimidine phosphoribosyltransferase family
PBONODFP_01594 0.0 ftsH - - O ko:K03798 - ko00000,ko00002,ko01000,ko01002,ko03110 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
PBONODFP_01595 1.93e-209 hslO - - O ko:K04083 - ko00000,ko03110 Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
PBONODFP_01596 2.53e-241 dus - - J ko:K05540 - ko00000,ko01000,ko03016 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PBONODFP_01597 0.0 lysS 6.1.1.6 - J ko:K04567 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the class-II aminoacyl-tRNA synthetase family
PBONODFP_01598 4.25e-33 - - - - - - - -
PBONODFP_01599 4.83e-50 - - - L ko:K07483 - ko00000 Transposase and inactivated derivatives
PBONODFP_01600 2.32e-198 is18 - - L - - - Integrase core domain
PBONODFP_01603 9.71e-31 - 3.4.22.70 - M ko:K07284 - ko00000,ko01000,ko01002,ko01011 Sortase family
PBONODFP_01606 7.16e-152 - - - O ko:K03696 ko01100,map01100 ko00000,ko03110 Belongs to the ClpA ClpB family
PBONODFP_01610 0.0 traI 5.99.1.2 - L ko:K03169 - ko00000,ko01000,ko03032 C-terminal repeat of topoisomerase
PBONODFP_01611 3.77e-18 XK27_07075 - - S ko:K07052 - ko00000 CAAX protease self-immunity
PBONODFP_01621 3.41e-52 - - - S - - - Protein of unknown function (DUF3102)
PBONODFP_01623 1.62e-118 - - - M - - - CHAP domain
PBONODFP_01625 4.08e-99 - - - S - - - COG0433 Predicted ATPase
PBONODFP_01626 3.14e-120 hpf - - J ko:K05808 - ko00000,ko03009 Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
PBONODFP_01627 0.0 secA - - U ko:K03070 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
PBONODFP_01628 8.03e-256 prfB - - J ko:K02836 - ko00000,ko03012 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
PBONODFP_01629 1.28e-276 minJ - - O - - - Domain present in PSD-95, Dlg, and ZO-1/2.
PBONODFP_01630 1.49e-170 phoP - - K ko:K07658 ko02020,map02020 ko00000,ko00001,ko00002,ko02022 response regulator
PBONODFP_01631 0.0 phoR 2.7.13.3 - T ko:K07636 ko02020,map02020 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Histidine kinase
PBONODFP_01632 6.91e-201 pstS - - P ko:K02040 ko02010,ko02020,ko05152,map02010,map02020,map05152 ko00000,ko00001,ko00002,ko02000 Phosphate
PBONODFP_01633 2.22e-206 pstC - - P ko:K02037 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 probably responsible for the translocation of the substrate across the membrane
PBONODFP_01634 5.04e-200 pstA - - P ko:K02038 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Phosphate transport system permease protein PstA
PBONODFP_01635 9.78e-190 pstB2 3.6.3.27 - P ko:K02036 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PBONODFP_01636 2.31e-179 pstB1 3.6.3.27 - P ko:K02036 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PBONODFP_01637 1.55e-150 phoU - - P ko:K02039 - ko00000 Plays a role in the regulation of phosphate uptake
PBONODFP_01638 2.78e-65 pspC - - KT ko:K03973 - ko00000,ko02048,ko03000 positive regulation of macromolecule biosynthetic process
PBONODFP_01639 2.87e-71 yvlD - - S ko:K08972 - ko00000 Mycobacterial 4 TMS phage holin, superfamily IV
PBONODFP_01640 2.55e-225 hprK - - F ko:K06023 - ko00000,ko01000 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
PBONODFP_01641 1.04e-211 lgt - - M ko:K13292 - ko00000,ko01000 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
PBONODFP_01642 2.82e-235 gpsA 1.1.1.94 - I ko:K00057 ko00564,ko01110,map00564,map01110 ko00000,ko00001,ko01000 Glycerol-3-phosphate dehydrogenase
PBONODFP_01643 1.13e-218 galU 2.7.7.9 - M ko:K00963 ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130 ko00000,ko00001,ko00002,ko01000 UTP-glucose-1-phosphate uridylyltransferase
PBONODFP_01644 1.06e-158 - - - T - - - Putative diguanylate phosphodiesterase
PBONODFP_01645 0.0 nox - - C - - - NADH oxidase
PBONODFP_01646 1.29e-206 ydaJ - - G - - - Belongs to the glycosyl hydrolase 8 (cellulase D) family
PBONODFP_01647 2.45e-310 - - - - - - - -
PBONODFP_01648 3.39e-256 - - - S - - - Protein conserved in bacteria
PBONODFP_01649 2.74e-277 ydaM - - M - - - Glycosyl transferase family group 2
PBONODFP_01651 4.23e-315 XK27_06930 - - V ko:K01421 - ko00000 domain protein
PBONODFP_01652 3.55e-72 mscL - - M ko:K03282 - ko00000,ko02000 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
PBONODFP_01653 2.07e-155 dgk2 - - F - - - deoxynucleoside kinase
PBONODFP_01654 5.45e-162 glpQ1 3.1.4.46 - C ko:K01126 ko00564,map00564 ko00000,ko00001,ko01000 glycerophosphoryl diester phosphodiesterase
PBONODFP_01655 0.0 ugpB - - G ko:K05813 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Bacterial extracellular solute-binding protein
PBONODFP_01656 3.05e-193 ugpE - - G ko:K05815 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter permease
PBONODFP_01657 2.27e-221 ugpA - - U ko:K02025,ko:K05814 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
PBONODFP_01658 1.24e-259 ugpC 3.6.3.20 - E ko:K05816,ko:K10112 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 Belongs to the ABC transporter superfamily
PBONODFP_01659 2.16e-109 - - - T - - - Belongs to the universal stress protein A family
PBONODFP_01660 0.0 pepV 3.5.1.18 - E ko:K01270,ko:K01274,ko:K01439 ko00300,ko00480,ko01100,ko01120,ko01230,map00300,map00480,map01100,map01120,map01230 ko00000,ko00001,ko00002,ko01000,ko01002 dipeptidase PepV
PBONODFP_01661 1.83e-194 nnrD 4.2.1.136, 5.1.99.6 - H ko:K17758,ko:K17759 - ko00000,ko01000 Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
PBONODFP_01662 5.04e-176 rsuA 5.4.99.19 - J ko:K06183 - ko00000,ko01000,ko03009 Belongs to the pseudouridine synthase RsuA family
PBONODFP_01663 0.0 ytgP - - S ko:K03328 - ko00000 Polysaccharide biosynthesis protein
PBONODFP_01664 0.0 leuS 6.1.1.4 - J ko:K01869 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Belongs to the class-I aminoacyl-tRNA synthetase family
PBONODFP_01665 6.19e-162 yodM 3.6.1.27 - I ko:K19302 ko00550,map00550 ko00000,ko00001,ko01000,ko01011 Acid phosphatase homologues
PBONODFP_01666 5.13e-138 mraW1 - - J - - - Putative rRNA methylase
PBONODFP_01667 9.32e-40 - - - - - - - -
PBONODFP_01668 0.0 tagE3 2.4.1.52 GT4 M ko:K00712 - ko00000,ko01000,ko01003 Glycosyl transferases group 1
PBONODFP_01669 0.0 tagE2 2.4.1.52 GT4 M ko:K00712 - ko00000,ko01000,ko01003 Glycosyl transferases group 1
PBONODFP_01670 7.22e-256 - - - S - - - Pfam Methyltransferase
PBONODFP_01671 5.81e-24 - - - N - - - Cell shape-determining protein MreB
PBONODFP_01673 3.16e-116 - - - M - - - Peptidase family S41
PBONODFP_01674 1.58e-277 - - - - - - - -
PBONODFP_01675 1.03e-240 yhaM - - S ko:K03698 - ko00000,ko01000,ko03019 Metal dependent phosphohydrolases with conserved 'HD' motif.
PBONODFP_01676 0.0 yhaN - - L - - - AAA domain
PBONODFP_01677 8.64e-294 yhaO - - L ko:K03547 - ko00000,ko03400 Ser Thr phosphatase family protein
PBONODFP_01678 9.94e-71 yheA - - S - - - Belongs to the UPF0342 family
PBONODFP_01679 0.0 pbp2A 2.4.1.129, 3.4.16.4 GT51 M ko:K12555 ko00550,ko01100,ko01501,map00550,map01100,map01501 ko00000,ko00001,ko01000,ko01003,ko01011 penicillin-binding protein
PBONODFP_01680 2.43e-18 - - - - - - - -
PBONODFP_01681 2.41e-101 argR - - K ko:K03402 - ko00000,ko03000 Regulates arginine biosynthesis genes
PBONODFP_01682 2.77e-271 arcT - - E - - - Aminotransferase
PBONODFP_01683 8.08e-133 argO - - S ko:K06895 - ko00000,ko02000 LysE type translocator
PBONODFP_01684 0.0 ydfD - - K ko:K18907 - ko00000,ko00002,ko01504,ko03000 Alanine-glyoxylate amino-transferase
PBONODFP_01685 1.65e-46 dltC2 6.1.1.13 - J ko:K14188 ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150 ko00000,ko00001,ko00002,ko01000,ko01504 Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PBONODFP_01686 1.41e-147 yciB - - M - - - ErfK YbiS YcfS YnhG
PBONODFP_01687 2.57e-273 - - - EGP ko:K08218 ko01501,map01501 ko00000,ko00001,ko00002,ko02000 Major facilitator Superfamily
PBONODFP_01688 3.61e-137 - - - - - - - -
PBONODFP_01689 0.0 yhcA - - V ko:K02003,ko:K02004 - ko00000,ko00002,ko02000 MacB-like periplasmic core domain
PBONODFP_01690 3.81e-105 - - - - - - - -
PBONODFP_01691 0.0 argS 6.1.1.19 - J ko:K01887 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Arginyl-tRNA synthetase
PBONODFP_01692 7.02e-103 yybD - - S ko:K02348 - ko00000 Acetyltransferase (GNAT) domain
PBONODFP_01695 1.79e-42 - - - - - - - -
PBONODFP_01696 8.98e-316 dinF - - V - - - MatE
PBONODFP_01697 0.0 - - - P - - - Sodium:sulfate symporter transmembrane region
PBONODFP_01698 0.0 astA 2.8.2.22 - M ko:K01023 - ko00000,ko01000 Arylsulfotransferase Ig-like domain
PBONODFP_01699 6.91e-234 nrnA 3.1.13.3, 3.1.3.7 - S ko:K06881 ko00920,ko01100,ko01120,map00920,map01100,map01120 ko00000,ko00001,ko01000,ko03400 DHHA1 domain
PBONODFP_01700 2.24e-146 cysC 2.7.1.25 - F ko:K00860 ko00230,ko00920,ko01100,ko01120,map00230,map00920,map01100,map01120 ko00000,ko00001,ko00002,ko01000 Catalyzes the synthesis of activated sulfate
PBONODFP_01701 8.91e-293 sat 2.7.7.4 - H ko:K00958 ko00230,ko00261,ko00450,ko00920,ko01100,ko01120,ko01130,map00230,map00261,map00450,map00920,map01100,map01120,map01130 ko00000,ko00001,ko00002,ko01000 the enzyme from Thermus thermophilus is dimeric and binds a zinc ion that is coordinated by cysteine and histidine residues that are not found in all related proteins but is found in some thermophilic organisms
PBONODFP_01702 0.0 - - - S - - - Protein conserved in bacteria
PBONODFP_01703 0.0 metE 2.1.1.14 - E ko:K00549 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
PBONODFP_01704 0.0 yitJ 1.5.1.20, 2.1.1.10 - E ko:K00297,ko:K00547 ko00270,ko00670,ko00720,ko01100,ko01110,ko01120,ko01200,ko01523,map00270,map00670,map00720,map01100,map01110,map01120,map01200,map01523 ko00000,ko00001,ko00002,ko01000 catalyzes the formation of 5,10-methylenetetrahydrofolate from 5-methyltetrahydrofolate and S-adenosyl-L-homocysteine and methionine from S-adenosyl-L-methionine and L-homocysteine
PBONODFP_01705 8.01e-77 - - - S - - - Protein of unknown function (DUF1516)
PBONODFP_01706 4.91e-117 gtcA1 - - S - - - Teichoic acid glycosylation protein
PBONODFP_01707 3.89e-237 - - - - - - - -
PBONODFP_01708 9.03e-16 - - - - - - - -
PBONODFP_01709 4.29e-87 - - - - - - - -
PBONODFP_01712 3.19e-50 - - - S - - - Haemolysin XhlA
PBONODFP_01713 4.46e-255 - - - M - - - Glycosyl hydrolases family 25
PBONODFP_01714 1.68e-33 - - - - - - - -
PBONODFP_01715 1.31e-107 - - - - - - - -
PBONODFP_01718 1.45e-126 - - - - - - - -
PBONODFP_01719 0.0 - - - S - - - Phage minor structural protein
PBONODFP_01720 1.15e-297 - - - S - - - Phage tail protein
PBONODFP_01721 0.0 - - - S - - - peptidoglycan catabolic process
PBONODFP_01722 5.58e-06 - - - - - - - -
PBONODFP_01724 6.37e-92 - - - S - - - Phage tail tube protein
PBONODFP_01726 1.14e-51 - - - - - - - -
PBONODFP_01727 3.45e-32 - - - S - - - Phage head-tail joining protein
PBONODFP_01728 9.27e-66 - - - S - - - Phage gp6-like head-tail connector protein
PBONODFP_01729 1.24e-263 - - - S - - - Phage capsid family
PBONODFP_01730 2.34e-156 - - - S - - - Clp protease
PBONODFP_01731 6.4e-280 - - - S - - - Phage portal protein
PBONODFP_01732 1.64e-35 - - - S - - - Protein of unknown function (DUF1056)
PBONODFP_01733 0.0 - - - S - - - Phage Terminase
PBONODFP_01734 8.75e-101 - - - S - - - Phage terminase, small subunit
PBONODFP_01737 2.95e-117 - - - L - - - HNH nucleases
PBONODFP_01741 2.19e-82 - - - S - - - Transcriptional regulator, RinA family
PBONODFP_01742 2.28e-25 - - - - - - - -
PBONODFP_01743 4.7e-42 - - - - - - - -
PBONODFP_01744 1.73e-15 - - - S - - - YopX protein
PBONODFP_01745 4.33e-05 - - - - - - - -
PBONODFP_01747 3e-61 - - - - - - - -
PBONODFP_01749 9.91e-170 - - - L ko:K02315 - ko00000,ko03032 IstB-like ATP binding protein
PBONODFP_01750 1.57e-94 - - - L - - - DnaD domain protein
PBONODFP_01751 1.37e-134 - - - S - - - Putative HNHc nuclease
PBONODFP_01754 7.64e-20 - - - - - - - -
PBONODFP_01756 3.83e-68 - - - S - - - Domain of unknown function (DUF771)
PBONODFP_01759 1.13e-72 - - - S - - - ORF6C domain
PBONODFP_01763 3.49e-30 - - - K - - - Helix-turn-helix XRE-family like proteins
PBONODFP_01764 6.22e-48 - - - S - - - Pfam:Peptidase_M78
PBONODFP_01770 3.03e-50 - - - S - - - Protein of unknown function (DUF4065)
PBONODFP_01771 3.18e-77 - - - L - - - Transposase
PBONODFP_01772 5.8e-46 - - - L - - - Putative transposase of IS4/5 family (DUF4096)
PBONODFP_01773 1.43e-271 - - - S - - - Phage integrase family
PBONODFP_01775 0.0 uvrA2 - - L - - - ABC transporter
PBONODFP_01776 7.12e-62 - - - - - - - -
PBONODFP_01777 8.82e-119 - - - - - - - -
PBONODFP_01778 2.2e-111 ohrR - - K ko:K18906 - ko00000,ko00002,ko01504,ko03000 helix_turn_helix multiple antibiotic resistance protein
PBONODFP_01779 1.06e-146 XK27_07085 - - S ko:K07052 - ko00000 CAAX protease self-immunity
PBONODFP_01780 4.56e-78 - - - - - - - -
PBONODFP_01781 5.37e-74 - - - - - - - -
PBONODFP_01782 1.82e-178 agrA - - K ko:K07707 ko02020,ko02024,map02020,map02024 ko00000,ko00001,ko00002,ko02022 LytTr DNA-binding domain
PBONODFP_01783 8.83e-285 pltK 2.7.13.3 - T ko:K07706 ko02020,ko02024,map02020,map02024 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 GHKL domain
PBONODFP_01784 7.83e-140 - - - - - - - -
PBONODFP_01785 4.65e-190 - - - S - - - Sucrose-6F-phosphate phosphohydrolase
PBONODFP_01786 1.55e-203 ydeD - - EG - - - COG0697 Permeases of the drug metabolite transporter (DMT) superfamily
PBONODFP_01787 5.48e-150 - - - GM - - - NAD(P)H-binding
PBONODFP_01788 2.12e-84 - - - K - - - helix_turn_helix, mercury resistance
PBONODFP_01789 3.86e-195 mrsA1 1.8.4.11 - O ko:K07304 - ko00000,ko01000 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PBONODFP_01791 6.05e-225 - - - K ko:K01990 - ko00000,ko00002,ko02000 LytTr DNA-binding domain
PBONODFP_01792 1.77e-200 - - - V ko:K01990 - ko00000,ko00002,ko02000 ABC transporter
PBONODFP_01793 9.16e-119 - - - V ko:K01992 - ko00000,ko00002,ko02000 Transport permease protein
PBONODFP_01795 3.65e-67 - - - S - - - Family of unknown function (DUF5388)
PBONODFP_01796 1.69e-190 soj - - D - - - CobQ CobB MinD ParA nucleotide binding domain protein
PBONODFP_01797 1.21e-54 - - - - - - - -
PBONODFP_01798 9.79e-37 - - - - - - - -
PBONODFP_01799 0.0 traA - - L - - - MobA MobL family protein
PBONODFP_01800 0.0 traI 5.99.1.2 - L ko:K03169 - ko00000,ko01000,ko03032 This gene contains a nucleotide ambiguity which may be the result of a sequencing error
PBONODFP_01801 1.25e-42 - - - - - - - -
PBONODFP_01802 2.37e-252 - - - L - - - Psort location Cytoplasmic, score
PBONODFP_01803 1.55e-142 - - - L - - - DpnII restriction endonuclease
PBONODFP_01804 4.93e-124 - 2.1.1.72 - L ko:K00571 - ko00000,ko01000,ko02048 Belongs to the N(4) N(6)-methyltransferase family
PBONODFP_01805 1.25e-123 dpnM 2.1.1.72 - H ko:K06223 ko03430,map03430 ko00000,ko00001,ko01000,ko02048,ko03032,ko03400 Site-specific DNA-methyltransferase (adenine-specific)
PBONODFP_01806 1.15e-52 - - - L ko:K07483 - ko00000 Transposase
PBONODFP_01807 1.08e-97 - - - L - - - 4.5 Transposon and IS
PBONODFP_01808 7.29e-46 - - - V - - - VanZ like family
PBONODFP_01809 1.41e-129 tnpR - - L - - - Resolvase, N terminal domain
PBONODFP_01810 6.62e-197 cylA - - V ko:K11050 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 AAA domain, putative AbiEii toxin, Type IV TA system
PBONODFP_01811 8.08e-180 cylB - - V ko:K11051 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC-2 type transporter
PBONODFP_01812 1.76e-86 - - - K - - - Bacterial regulatory proteins, tetR family
PBONODFP_01814 0.0 - 4.2.1.53 - S ko:K10254 - ko00000,ko01000 Myosin-crossreactive antigen
PBONODFP_01816 1.95e-45 ydaT - - - - - - -
PBONODFP_01817 1.71e-101 - - - L - - - Transposase and inactivated derivatives, IS30 family
PBONODFP_01818 3.03e-164 - - - EGP ko:K08164 - ko00000,ko02000 Transporter
PBONODFP_01819 7.86e-242 - - - GM ko:K19426 - ko00000,ko01000 Polysaccharide pyruvyl transferase
PBONODFP_01820 3.12e-309 - - - EGP - - - Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family
PBONODFP_01821 6.96e-20 - - - S - - - Transglycosylase associated protein
PBONODFP_01822 2.41e-109 - - - S - - - Domain of unknown function (DUF4355)
PBONODFP_01823 7.62e-42 gpG - - - - - - -
PBONODFP_01824 1.08e-60 gpG - - - - - - -
PBONODFP_01825 0.0 frdA 1.3.5.4 - C ko:K00244 ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020 ko00000,ko00001,ko00002,ko01000 FAD binding domain
PBONODFP_01826 0.0 fumC 4.2.1.2 - C ko:K01679 ko00020,ko00620,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko04934,ko05200,ko05211,map00020,map00620,map00720,map01100,map01110,map01120,map01130,map01200,map04934,map05200,map05211 ko00000,ko00001,ko00002,ko01000 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
PBONODFP_01827 0.0 citF 2.8.3.10 - H ko:K01643 ko02020,map02020 ko00000,ko00001,ko01000 Citrate (pro-3S)-lyase alpha chain
PBONODFP_01828 3.32e-210 citE 4.1.3.34 - G ko:K01644 ko02020,map02020 ko00000,ko00001,ko01000 Belongs to the HpcH HpaI aldolase family
PBONODFP_01829 1.23e-58 citD - - C ko:K01646 ko02020,map02020 ko00000,ko00001 Covalent carrier of the coenzyme of citrate lyase
PBONODFP_01830 5.31e-242 citC 6.2.1.22 - H ko:K01910 ko02020,map02020 ko00000,ko00001,ko01000 Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
PBONODFP_01831 3.19e-263 mae 1.1.1.38 - C ko:K00027 ko00620,ko01200,ko02020,map00620,map01200,map02020 ko00000,ko00001,ko01000 Malic enzyme, NAD binding domain
PBONODFP_01832 7.14e-229 citR - - K - - - sugar-binding domain protein
PBONODFP_01833 0.0 citP - - P ko:K03319 - ko00000 Sodium:sulfate symporter transmembrane region
PBONODFP_01834 9.2e-215 ldh 1.1.1.27 - C ko:K00016 ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922 ko00000,ko00001,ko01000,ko04147 Belongs to the LDH MDH superfamily. LDH family
PBONODFP_01835 1.18e-66 - - - - - - - -
PBONODFP_01836 5.19e-223 mntA - - P ko:K19975,ko:K19976 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Belongs to the bacterial solute-binding protein 9 family
PBONODFP_01837 3.54e-180 mtsB - - U ko:K19972,ko:K19976 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC 3 transport family
PBONODFP_01838 2.04e-170 mntB 3.6.3.35 - P ko:K02074,ko:K09820,ko:K19973 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ABC transporter
PBONODFP_01839 1.57e-196 citG 2.4.2.52 - H ko:K05966 ko02020,map02020 ko00000,ko00001,ko01000 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase
PBONODFP_01840 1.28e-253 - - - K - - - Helix-turn-helix domain
PBONODFP_01841 5.21e-226 ttdA 4.2.1.32 - C ko:K03779 ko00630,map00630 ko00000,ko00001,ko01000 Fumarate hydratase (Fumerase)
PBONODFP_01842 1.41e-147 - 4.2.1.2, 4.2.1.32 - C ko:K01676,ko:K03780 ko00020,ko00620,ko00630,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00620,map00630,map00720,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the reversible hydration of fumarate to (S)- malate
PBONODFP_01843 3.05e-69 yitW - - S - - - Iron-sulfur cluster assembly protein
PBONODFP_01844 4.93e-275 - - - P ko:K03319 - ko00000 Sodium:sulfate symporter transmembrane region
PBONODFP_01845 1.82e-253 aroB 4.2.3.4 - E ko:K01735 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
PBONODFP_01846 3.3e-235 aroF 2.5.1.54 - E ko:K03856 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 DAHP synthetase I family
PBONODFP_01847 7.53e-208 aroE 1.1.1.25 - E ko:K00014 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
PBONODFP_01848 8.39e-275 tkt2 2.2.1.1 - H ko:K00615 ko00030,ko00710,ko01051,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01051,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
PBONODFP_01849 1.97e-110 - - - S - - - Pfam:DUF3816
PBONODFP_01850 1.21e-306 tyrS 6.1.1.1 - J ko:K01866 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
PBONODFP_01851 1.27e-143 - - - - - - - -
PBONODFP_01852 7.58e-244 - - - M ko:K07273 - ko00000 Glycosyl hydrolases family 25
PBONODFP_01853 3.84e-185 - - - S - - - Peptidase_C39 like family
PBONODFP_01854 1.04e-120 - - - S - - - Protein of unknown function (DUF1694)
PBONODFP_01855 3.38e-150 - - - S ko:K07150 - ko00000 Protein of unknown function (DUF554)
PBONODFP_01856 9.38e-189 - - - KT - - - helix_turn_helix, mercury resistance
PBONODFP_01857 3.41e-295 gltT - - U ko:K03309,ko:K11102 - ko00000,ko02000 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
PBONODFP_01858 1.86e-123 - - - S ko:K08996 - ko00000 Protein of unknown function (DUF1440)
PBONODFP_01859 1.2e-240 - - - V ko:K02004 - ko00000,ko00002,ko02000 ABC transporter permease
PBONODFP_01860 7.14e-157 - - - V ko:K02003 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
PBONODFP_01861 2.76e-117 - - - T ko:K16923 - ko00000,ko00002,ko02000 phosphorelay sensor kinase activity
PBONODFP_01862 2e-238 iunH3 3.2.2.1 - F ko:K01239 ko00230,ko00760,ko01100,map00230,map00760,map01100 ko00000,ko00001,ko01000 Inosine-uridine preferring nucleoside hydrolase
PBONODFP_01863 3.55e-127 ywjB - - H - - - RibD C-terminal domain
PBONODFP_01864 1.97e-258 napA - - P - - - Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
PBONODFP_01865 9.01e-155 - - - S - - - Membrane
PBONODFP_01866 2.11e-199 mleP3 - - S ko:K07088 - ko00000 Membrane transport protein
PBONODFP_01867 0.0 aspA 4.3.1.1 - E ko:K01744 ko00250,ko01100,map00250,map01100 ko00000,ko00001,ko01000 Fumarase C C-terminus
PBONODFP_01868 3.04e-261 - - - EGP - - - Major Facilitator Superfamily
PBONODFP_01869 7.22e-163 - 3.8.1.2 - S ko:K01560 ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120 ko00000,ko00001,ko01000 Haloacid dehalogenase-like hydrolase
PBONODFP_01870 0.0 ycnB - - U - - - Belongs to the major facilitator superfamily
PBONODFP_01871 5.1e-103 - - - S - - - Domain of unknown function (DUF4811)
PBONODFP_01872 0.0 gshR3 1.8.1.7 - C ko:K00383 ko00480,ko04918,map00480,map04918 ko00000,ko00001,ko01000 Glutathione reductase
PBONODFP_01873 1.22e-252 glxK 2.7.1.165 - G ko:K00865 ko00260,ko00561,ko00630,ko01100,ko01120,ko01130,map00260,map00561,map00630,map01100,map01120,map01130 ko00000,ko00001,ko01000 Belongs to the glycerate kinase type-1 family
PBONODFP_01874 4.68e-235 - - - D ko:K06889 - ko00000 Alpha beta
PBONODFP_01875 4.93e-211 crtM 2.5.1.32, 2.5.1.99 - I ko:K02291 ko00906,ko01062,ko01100,ko01110,map00906,map01062,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko01006 Squalene/phytoene synthase
PBONODFP_01876 0.0 - 1.3.99.26, 1.3.99.28, 1.3.99.29, 1.3.99.31 - Q ko:K10027 ko00906,ko01100,ko01110,map00906,map01100,map01110 ko00000,ko00001,ko01000 Flavin containing amine oxidoreductase
PBONODFP_01877 1.48e-152 yugP - - S ko:K06973 - ko00000 Putative neutral zinc metallopeptidase
PBONODFP_01878 1.03e-34 - - - - - - - -
PBONODFP_01879 3.84e-186 WQ51_01275 - - S - - - EDD domain protein, DegV family
PBONODFP_01880 2.88e-164 lrgB - - M ko:K05339 ko02020,map02020 ko00000,ko00001 LrgB-like family
PBONODFP_01881 4.14e-84 lrgA - - S ko:K05338 ko02020,map02020 ko00000,ko00001,ko02000 LrgA family
PBONODFP_01882 9.38e-134 - - - J - - - Acetyltransferase (GNAT) domain
PBONODFP_01883 7.93e-217 - 3.1.4.17, 3.1.4.53 - S ko:K01120,ko:K03651 ko00230,ko02025,map00230,map02025 ko00000,ko00001,ko01000 Calcineurin-like phosphoesterase
PBONODFP_01884 6.46e-49 - - - S - - - Phospholipase_D-nuclease N-terminal
PBONODFP_01885 1.28e-77 - - - S - - - Enterocin A Immunity
PBONODFP_01886 1.55e-114 perR - - P ko:K03711,ko:K09825 - ko00000,ko03000 Belongs to the Fur family
PBONODFP_01887 3.32e-135 - - - - - - - -
PBONODFP_01888 8.44e-304 - - - S - - - module of peptide synthetase
PBONODFP_01889 8.66e-130 - - - S - - - NADPH-dependent FMN reductase
PBONODFP_01891 1.46e-163 nth2 - - L ko:K07457 - ko00000 Base excision DNA repair protein, HhH-GPD family
PBONODFP_01892 0.0 pts28ABC - - G ko:K02755,ko:K02756,ko:K02757 ko02060,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 phosphotransferase system
PBONODFP_01893 8.79e-199 - - - GM - - - NmrA-like family
PBONODFP_01894 4.08e-101 - - - K - - - MerR family regulatory protein
PBONODFP_01895 2.11e-104 manR - - GKT ko:K02538,ko:K03491 - ko00000,ko03000 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PBONODFP_01896 5.55e-22 - - - G ko:K11203 - ko00000,ko00002,ko02000 PTS system, fructose subfamily
PBONODFP_01897 2.52e-35 - 2.7.1.202 - G ko:K02769 ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system, Lactose/Cellobiose specific IIB subunit
PBONODFP_01898 1.55e-07 - - - K - - - transcriptional regulator
PBONODFP_01899 3.08e-271 - - - S - - - membrane
PBONODFP_01900 6.13e-105 - - - K - - - Bacterial regulatory proteins, tetR family
PBONODFP_01901 0.0 - - - S - - - Zinc finger, swim domain protein
PBONODFP_01902 8.09e-146 - - - GM - - - epimerase
PBONODFP_01903 1.56e-90 - - - S - - - Protein of unknown function (DUF1722)
PBONODFP_01904 2.65e-93 spx2 - - P ko:K16509 - ko00000 ArsC family
PBONODFP_01905 5.1e-140 yjhB 3.6.1.13 - F ko:K01515 ko00230,map00230 ko00000,ko00001,ko01000 NUDIX domain
PBONODFP_01906 1.68e-176 - - - K ko:K22103 - ko00000,ko03000 DeoR C terminal sensor domain
PBONODFP_01907 0.0 nox - - P - - - Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
PBONODFP_01908 1.12e-265 dapE 3.5.1.18 - E ko:K01439 ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230 ko00000,ko00001,ko00002,ko01000 succinyl-diaminopimelate desuccinylase
PBONODFP_01909 4.38e-102 - - - K - - - Transcriptional regulator
PBONODFP_01910 1.54e-305 - - - U ko:K18926 - ko00000,ko00002,ko02000 Major Facilitator Superfamily
PBONODFP_01911 1.09e-310 eno 4.2.1.11 - G ko:K01689 ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066 ko00000,ko00001,ko00002,ko01000,ko03019,ko04147 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
PBONODFP_01912 0.0 - - - P - - - Cation transporter/ATPase, N-terminus
PBONODFP_01913 1.51e-232 - - - C - - - Zinc-binding dehydrogenase
PBONODFP_01914 6.09e-281 - - - I - - - transferase activity, transferring acyl groups other than amino-acyl groups
PBONODFP_01915 5.78e-268 - - - - - - - -
PBONODFP_01916 7.43e-119 yetL - - K - - - helix_turn_helix multiple antibiotic resistance protein
PBONODFP_01917 1.94e-83 - - - P - - - Rhodanese Homology Domain
PBONODFP_01918 0.0 pps 2.7.9.2 - H ko:K01007 ko00620,ko00680,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate
PBONODFP_01919 7.45e-178 puuD - - S ko:K07010 - ko00000,ko01002 peptidase C26
PBONODFP_01920 9.14e-265 thiP - - U - - - Belongs to the purine-cytosine permease (2.A.39) family
PBONODFP_01921 7.15e-148 thiE 2.5.1.3 - H ko:K00788 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko00002,ko01000 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)
PBONODFP_01922 8.33e-189 thiD 2.7.1.49, 2.7.4.7 - H ko:K00941 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko00002,ko01000 Phosphomethylpyrimidine kinase
PBONODFP_01923 1.87e-175 thiM 2.7.1.50 - H ko:K00878 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
PBONODFP_01924 6.09e-228 - - - C - - - Zinc-binding dehydrogenase
PBONODFP_01925 6.38e-194 larE - - S ko:K06864 - ko00000 NAD synthase
PBONODFP_01926 1.19e-170 glpF - - U ko:K02440 - ko00000,ko02000 Belongs to the MIP aquaporin (TC 1.A.8) family
PBONODFP_01927 6.32e-99 larC2 4.99.1.12 - S ko:K09121 - ko00000,ko01000 Protein of unknown function DUF111
PBONODFP_01928 2.03e-179 larC 4.99.1.12 - S ko:K09121 - ko00000,ko01000 Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2 ), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor- dependent enzymes
PBONODFP_01929 2.65e-162 larB - - S ko:K06898 - ko00000 AIR carboxylase
PBONODFP_01930 7.9e-306 larA 5.1.2.1 - S ko:K22373 ko00620,map00620 ko00000,ko00001,ko01000 Domain of unknown function (DUF2088)
PBONODFP_01931 1.39e-156 rcfB - - K - - - Crp-like helix-turn-helix domain
PBONODFP_01932 3.71e-235 cbiM - - P ko:K02007 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 PDGLE domain
PBONODFP_01933 8.38e-193 - - - P ko:K02008 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Cobalt transport protein
PBONODFP_01934 7.41e-167 - - - P ko:K02006 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter
PBONODFP_01935 1.67e-54 - - - - - - - -
PBONODFP_01936 5.9e-186 ant1 2.7.7.47 - H ko:K00984 - ko00000,ko01000,ko01504 Mediates bacterial resistance to the antibiotics streptomycin and spectomycin
PBONODFP_01937 4.07e-05 - - - - - - - -
PBONODFP_01938 5.67e-179 - - - - - - - -
PBONODFP_01939 0.0 oppA - - E ko:K02035,ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 Bacterial extracellular solute-binding proteins, family 5 Middle
PBONODFP_01940 2.38e-99 - - - - - - - -
PBONODFP_01941 2.14e-178 XK27_08125 - - S ko:K09861 - ko00000 Belongs to the UPF0246 family
PBONODFP_01942 9.78e-219 pepI 3.4.11.5 - E ko:K01259 ko00330,map00330 ko00000,ko00001,ko01000,ko01002 Releases the N-terminal proline from various substrates
PBONODFP_01943 5.98e-302 mepA - - V ko:K18908 - ko00000,ko00002,ko01504,ko02000 MATE efflux family protein
PBONODFP_01944 1.92e-67 - - - K - - - helix_turn_helix, Arsenical Resistance Operon Repressor
PBONODFP_01945 3.14e-230 - 1.1.1.1 - C ko:K00001 ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220 ko00000,ko00001,ko01000 nadph quinone reductase
PBONODFP_01946 1.4e-162 - - - S - - - DJ-1/PfpI family
PBONODFP_01947 7.65e-121 yfbM - - K - - - FR47-like protein
PBONODFP_01948 4.28e-195 - - - EG - - - EamA-like transporter family
PBONODFP_01949 4.73e-143 - - - S - - - Protein of unknown function
PBONODFP_01950 1.15e-07 - - - S - - - Protein of unknown function
PBONODFP_01951 0.0 fusA1 - - J - - - elongation factor G
PBONODFP_01952 1.34e-151 azoR - - C ko:K01118 - ko00000,ko01000 Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
PBONODFP_01953 1.67e-220 - - - K - - - WYL domain
PBONODFP_01954 3.06e-165 - - - F - - - glutamine amidotransferase
PBONODFP_01955 1.65e-106 - - - S - - - ASCH
PBONODFP_01956 0.0 hpaH 1.14.14.8, 1.14.14.9 - Q ko:K00483,ko:K16901 ko00350,ko00380,ko01120,ko01220,map00350,map00380,map01120,map01220 ko00000,ko00001,ko01000 4-hydroxyphenylacetate
PBONODFP_01957 3.97e-174 ptp1 3.1.3.48 - T ko:K01104 - ko00000,ko01000 Tyrosine phosphatase family
PBONODFP_01958 0.0 - - - S - - - Putative threonine/serine exporter
PBONODFP_01959 1.54e-248 pva1 3.5.1.24 - M ko:K01442 ko00120,ko00121,ko01100,map00120,map00121,map01100 ko00000,ko00001,ko01000 Linear amide C-N hydrolase, choloylglycine hydrolase family protein
PBONODFP_01960 3.83e-155 pgmB 5.4.2.6 - S ko:K01838 ko00500,map00500 ko00000,ko00001,ko01000 beta-phosphoglucomutase
PBONODFP_01961 0.0 - - - QT - - - PucR C-terminal helix-turn-helix domain
PBONODFP_01962 5.07e-157 ydgI - - C - - - Nitroreductase family
PBONODFP_01963 5.74e-204 adc 4.1.1.4 - Q ko:K01574 ko00072,ko00640,ko01100,map00072,map00640,map01100 ko00000,ko00001,ko00002,ko01000 Acetoacetate decarboxylase (ADC)
PBONODFP_01964 4.06e-211 - - - S - - - KR domain
PBONODFP_01965 4.48e-98 arsC 1.20.4.1 - T ko:K03741 - ko00000,ko01000 Belongs to the low molecular weight phosphotyrosine protein phosphatase family
PBONODFP_01966 2.49e-95 - - - C - - - FMN binding
PBONODFP_01967 1.46e-204 - - - K - - - LysR family
PBONODFP_01968 0.0 - - - P ko:K03319 - ko00000 Sodium:sulfate symporter transmembrane region
PBONODFP_01980 1.08e-117 traP 1.14.99.57 - S ko:K21481 - ko00000,ko01000 enzyme involved in biosynthesis of extracellular polysaccharides
PBONODFP_01981 2.81e-178 yhfI - - S - - - Metallo-beta-lactamase superfamily
PBONODFP_01982 9.28e-89 spxA - - K ko:K16509 - ko00000 Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
PBONODFP_01983 7.12e-170 mecA - - NOT ko:K16511 - ko00000 Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
PBONODFP_01984 3.19e-264 coiA - - S ko:K06198 - ko00000 Competence protein
PBONODFP_01985 0.0 pepF - - E ko:K08602 - ko00000,ko01000,ko01002 oligoendopeptidase F
PBONODFP_01986 2.24e-148 yjbH - - Q - - - Thioredoxin
PBONODFP_01987 9.08e-157 yjbM 2.7.6.5 - S ko:K07816 ko00230,map00230 ko00000,ko00001,ko01000 RelA SpoT domain protein
PBONODFP_01988 1.29e-193 nadK 2.7.1.23 - F ko:K00858 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko01000 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
PBONODFP_01989 1.09e-222 yjbO 5.4.99.23 - G ko:K06180 - ko00000,ko01000,ko03009 Responsible for synthesis of pseudouridine from uracil
PBONODFP_01990 7.21e-150 cutC - - P ko:K06201 - ko00000 Participates in the control of copper homeostasis
PBONODFP_01991 6.5e-246 pgl 3.1.1.31 - G ko:K07404 ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Lactonase, 7-bladed beta-propeller
PBONODFP_01992 2.68e-75 srlB 2.7.1.198 - G ko:K02781 ko00051,ko02060,map00051,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system glucitol/sorbitol-specific IIA component
PBONODFP_01993 9.52e-264 XK27_05220 - - S - - - AI-2E family transporter
PBONODFP_01994 4.82e-55 rpsN - - J ko:K02954 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PBONODFP_01995 3.74e-206 rrmA 2.1.1.187 - H ko:K00563,ko:K10947 - ko00000,ko01000,ko03000,ko03009 Methyltransferase
PBONODFP_01997 2.17e-302 brnQ - - U ko:K03311 - ko00000 Component of the transport system for branched-chain amino acids
PBONODFP_01998 2.5e-147 - - - S ko:K07118 - ko00000 NAD(P)H-binding
PBONODFP_01999 4.97e-124 cspR 2.1.1.207 - J ko:K03216 - ko00000,ko01000,ko03016 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
PBONODFP_02000 0.0 ftsK - - D ko:K03466 - ko00000,ko03036 Belongs to the FtsK SpoIIIE SftA family
PBONODFP_02001 4.99e-224 - - - P ko:K03284 - ko00000,ko02000 CorA-like Mg2+ transporter protein
PBONODFP_02002 3.22e-82 - - - S - - - Protein of unknown function (DUF3397)
PBONODFP_02007 5.4e-118 - 2.4.2.7 - F ko:K00759 ko00230,ko01100,map00230,map01100 ko00000,ko00001,ko01000,ko04147 Phosphoribosyl transferase domain
PBONODFP_02008 3.15e-237 - - - P ko:K06901 - ko00000,ko02000 secondary active sulfate transmembrane transporter activity
PBONODFP_02009 8.45e-123 - - - - - - - -
PBONODFP_02010 1.58e-122 - - - K - - - Acetyltransferase (GNAT) domain
PBONODFP_02011 2.52e-201 prpA3 3.1.3.16 - T ko:K01090 - ko00000,ko01000 Calcineurin-like phosphoesterase superfamily domain
PBONODFP_02014 3.8e-292 mntH - - P ko:K03322 - ko00000,ko02000 H( )-stimulated, divalent metal cation uptake system
PBONODFP_02015 8.46e-239 hemH 4.99.1.1, 4.99.1.9 - H ko:K01772 ko00860,ko01100,ko01110,map00860,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Catalyzes the ferrous insertion into protoporphyrin IX
PBONODFP_02016 0.0 ybgF - - E ko:K02205,ko:K03293,ko:K16235,ko:K16236 - ko00000,ko02000 amino acid
PBONODFP_02017 7.89e-216 mmuM 2.1.1.10 - H ko:K00547 ko00270,ko01100,ko01110,map00270,map01100,map01110 ko00000,ko00001,ko01000 homocysteine S-methyltransferase
PBONODFP_02018 0.0 - 2.4.1.52 GT4 M ko:K00712 - ko00000,ko01000,ko01003 Glycosyl transferases group 1
PBONODFP_02019 3.21e-155 - - - - - - - -
PBONODFP_02020 2.78e-273 metK 2.5.1.6 - H ko:K00789 ko00270,ko01100,ko01110,ko01230,map00270,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
PBONODFP_02021 0.0 mdr - - EGP - - - Major Facilitator
PBONODFP_02024 5.98e-150 lepB 3.4.21.89 - U ko:K03100 ko02024,ko03060,map02024,map03060 ko00000,ko00001,ko01000,ko01002 Belongs to the peptidase S26 family
PBONODFP_02025 1.24e-138 thgA3 2.3.1.79 - S ko:K00661 - ko00000,ko01000 Maltose acetyltransferase
PBONODFP_02026 2.93e-151 nth 4.2.99.18 - L ko:K10773 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
PBONODFP_02028 1.74e-156 - - - V ko:K02003 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
PBONODFP_02029 0.0 ylbB - - V ko:K02004 - ko00000,ko00002,ko02000 ABC transporter permease
PBONODFP_02030 1.46e-299 dapE 3.5.1.18 - E ko:K01439 ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230 ko00000,ko00001,ko00002,ko01000 succinyl-diaminopimelate desuccinylase
PBONODFP_02031 7.37e-103 - - - K - - - transcriptional regulator, MerR family
PBONODFP_02032 2.27e-98 yphH - - S - - - Cupin domain
PBONODFP_02033 1.16e-72 cmd 4.1.1.44 - S ko:K01607 ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220 ko00000,ko00001,ko01000 Carboxymuconolactone decarboxylase family
PBONODFP_02034 3.63e-165 - - - S - - - Belongs to the short-chain dehydrogenases reductases (SDR) family
PBONODFP_02035 7.88e-269 natB - - CP ko:K01992 - ko00000,ko00002,ko02000 ABC-2 family transporter protein
PBONODFP_02036 4.23e-215 natA - - S ko:K01990 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
PBONODFP_02037 1.6e-119 adaB 2.1.1.63 - L ko:K00567,ko:K10778,ko:K13531 - ko00000,ko01000,ko03000,ko03400 Methyltransferase
PBONODFP_02038 9.57e-87 - - - M - - - LysM domain
PBONODFP_02040 0.0 tagE6 2.4.1.52 GT4 M ko:K00712 - ko00000,ko01000,ko01003 Glycosyl transferases group 1
PBONODFP_02041 0.0 tagE5 2.4.1.52 GT4 M ko:K00712 - ko00000,ko01000,ko01003 Poly(Glycerol-phosphate) alpha-glucosyltransferase
PBONODFP_02042 2.06e-194 rlrG - - K ko:K21900 - ko00000,ko03000 Transcriptional regulator
PBONODFP_02043 4.38e-222 - - - S - - - Conserved hypothetical protein 698
PBONODFP_02044 8.99e-133 ydaF - - J ko:K03817 - ko00000,ko01000,ko03009 Acetyltransferase (GNAT) domain
PBONODFP_02045 0.0 - - - M - - - Domain of unknown function (DUF5011)
PBONODFP_02046 0.0 glnP - - P ko:K02029,ko:K02030,ko:K10036 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter
PBONODFP_02047 9.36e-171 glnQ 3.6.3.21 - E ko:K02028 - ko00000,ko00002,ko01000,ko02000 ABC transporter, ATP-binding protein
PBONODFP_02048 7.98e-137 - - - - - - - -
PBONODFP_02049 1.98e-199 ycsE - - S - - - Sucrose-6F-phosphate phosphohydrolase
PBONODFP_02050 5.71e-174 ung 3.2.2.27 - L ko:K03648 ko03410,ko05340,map03410,map05340 ko00000,ko00001,ko01000,ko03400 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
PBONODFP_02051 1.23e-227 pta 2.3.1.8, 3.6.3.21 - C ko:K00625,ko:K02028 ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000,ko02000 phosphate acetyltransferase
PBONODFP_02052 1.29e-105 ydiB - - O ko:K06925 - ko00000,ko03016 Hydrolase, P-loop family
PBONODFP_02053 2.52e-114 - - - J - - - Acetyltransferase (GNAT) domain
PBONODFP_02054 2.41e-129 dnaQ 2.7.7.7 - L ko:K02342 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase III
PBONODFP_02055 1.03e-197 exoA 3.1.11.2 - L ko:K01142 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 exodeoxyribonuclease III
PBONODFP_02056 1.06e-192 ysjB - - S ko:K03810 - ko00000 Oxidoreductase family, NAD-binding Rossmann fold
PBONODFP_02057 6.24e-214 murB 1.3.1.98 - M ko:K00075 ko00520,ko00550,ko01100,map00520,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Cell wall formation
PBONODFP_02058 0.0 yvgP - - P ko:K03316 - ko00000 Sodium proton antiporter
PBONODFP_02059 3.07e-119 - - - K - - - helix_turn_helix multiple antibiotic resistance protein
PBONODFP_02060 6.9e-157 - - - S - - - Protein of unknown function (DUF1361)
PBONODFP_02061 8.33e-192 dacA 2.7.7.85 - S ko:K18672 - ko00000,ko01000 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
PBONODFP_02062 2.18e-182 ybbR - - S - - - YbbR-like protein
PBONODFP_02063 0.0 glmM 5.4.2.10 - G ko:K03431 ko00520,ko01100,ko01130,map00520,map01100,map01130 ko00000,ko00001,ko01000 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
PBONODFP_02064 0.0 glmS 2.6.1.16 - M ko:K00820 ko00250,ko00520,ko01100,ko01130,ko04931,map00250,map00520,map01100,map01130,map04931 ko00000,ko00001,ko01000,ko01002 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
PBONODFP_02065 3.15e-158 - - - T - - - EAL domain
PBONODFP_02066 1.33e-188 - 3.1.3.23 - S ko:K07757 - ko00000,ko01000 Sucrose-6F-phosphate phosphohydrolase
PBONODFP_02067 1.21e-135 - - - K - - - Bacterial regulatory proteins, tetR family
PBONODFP_02068 2.07e-263 galM 5.1.3.3 - G ko:K01785 ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the interconversion of alpha and beta anomers of maltose
PBONODFP_02069 3.38e-70 - - - - - - - -
PBONODFP_02070 2.49e-95 - - - - - - - -
PBONODFP_02071 2.87e-168 nfrA 1.5.1.38 - C ko:K19285 ko00740,ko01100,map00740,map01100 ko00000,ko00001,ko01000 nitroreductase
PBONODFP_02072 1.73e-178 - - - EGP - - - Transmembrane secretion effector
PBONODFP_02073 2.09e-42 - - - G ko:K08217 - br01600,ko00000,ko01504,ko02000 Transmembrane secretion effector
PBONODFP_02074 0.0 glpK 2.7.1.30 - F ko:K00864 ko00561,ko01100,ko03320,ko04626,map00561,map01100,map03320,map04626 ko00000,ko00001,ko01000,ko04147 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
PBONODFP_02075 4.13e-182 - - - - - - - -
PBONODFP_02077 5.45e-94 spx1 - - P ko:K16509 - ko00000 ArsC family
PBONODFP_02078 3.88e-46 - - - - - - - -
PBONODFP_02079 2.08e-117 - - - V - - - VanZ like family
PBONODFP_02080 1.06e-314 - - - EGP - - - Major Facilitator
PBONODFP_02081 4.45e-226 ppx 3.6.1.11, 3.6.1.40 - FP ko:K01524 ko00230,map00230 ko00000,ko00001,ko01000 exopolyphosphatase
PBONODFP_02082 0.0 ppk 2.7.4.1 - P ko:K00937 ko00190,ko03018,map00190,map03018 ko00000,ko00001,ko01000,ko03019 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
PBONODFP_02083 0.0 ppx3 3.6.1.11, 3.6.1.40 - FP ko:K01524 ko00230,map00230 ko00000,ko00001,ko01000 exopolyphosphatase
PBONODFP_02084 6.68e-197 licD - - M ko:K07271 - ko00000,ko01000 LicD family
PBONODFP_02085 6.16e-107 - - - K - - - Transcriptional regulator
PBONODFP_02086 1.36e-27 - - - - - - - -
PBONODFP_02087 1.79e-287 pbuG - - S ko:K06901 - ko00000,ko02000 permease
PBONODFP_02088 0.0 pox1 1.2.3.3 - EH ko:K00158 ko00620,ko01100,map00620,map01100 ko00000,ko00001,ko01000 Belongs to the TPP enzyme family
PBONODFP_02089 5.47e-198 ribC1 2.7.1.26, 2.7.7.2 - H ko:K11753 ko00740,ko01100,ko01110,map00740,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Belongs to the ribF family
PBONODFP_02090 0.0 pox2 1.2.3.3 - EH ko:K00158 ko00620,ko01100,map00620,map01100 ko00000,ko00001,ko01000 Belongs to the TPP enzyme family
PBONODFP_02091 6.37e-232 pepR 3.4.11.5 - E ko:K01259 ko00330,map00330 ko00000,ko00001,ko01000,ko01002 Releases the N-terminal proline from various substrates
PBONODFP_02092 1.23e-229 birA 6.3.4.15 - H ko:K03524 ko00780,ko01100,map00780,map01100 ko00000,ko00001,ko01000,ko03000 Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
PBONODFP_02093 0.0 oatA - - I - - - Acyltransferase
PBONODFP_02094 0.0 pepX 3.4.14.11 - E ko:K01281 - ko00000,ko01000,ko01002 Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
PBONODFP_02095 1.89e-90 - - - O - - - OsmC-like protein
PBONODFP_02096 1.09e-60 - - - - - - - -
PBONODFP_02097 0.0 yhdG - - E ko:K03294 - ko00000 Amino Acid
PBONODFP_02098 6.12e-115 - - - - - - - -
PBONODFP_02099 5.24e-191 pdxK 2.7.1.35 - H ko:K00868 ko00750,ko01100,map00750,map01100 ko00000,ko00001,ko01000 Phosphomethylpyrimidine kinase
PBONODFP_02100 1.24e-94 - - - F - - - Nudix hydrolase
PBONODFP_02101 1.48e-27 - - - - - - - -
PBONODFP_02102 6.02e-135 gmk2 2.7.4.8 - F ko:K00942 ko00230,ko01100,map00230,map01100 ko00000,ko00001,ko00002,ko01000 Guanylate kinase
PBONODFP_02103 2.02e-106 zur - - P ko:K02076,ko:K03711 - ko00000,ko03000 Belongs to the Fur family
PBONODFP_02104 8.84e-18 - 3.2.1.14 GH18 - ko:K01183 ko00520,ko01100,map00520,map01100 ko00000,ko00001,ko01000 -
PBONODFP_02105 1.01e-188 - - - - - - - -
PBONODFP_02106 6.94e-146 gph1 3.1.3.18 - S ko:K01091 ko00630,ko01100,ko01110,ko01130,map00630,map01100,map01110,map01130 ko00000,ko00001,ko01000 HAD hydrolase, family IA, variant
PBONODFP_02107 3.21e-268 aspC 2.6.1.57 - E ko:K00832,ko:K00841 ko00270,ko00300,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01230,map00270,map00300,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Aminotransferase
PBONODFP_02108 1.03e-217 ldhD 1.1.1.28 - CH ko:K03778 ko00620,ko01120,map00620,map01120 ko00000,ko00001,ko01000 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PBONODFP_02109 1.28e-54 - - - - - - - -
PBONODFP_02111 6.59e-172 glnQ - - E ko:K10041 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ABC transporter, ATP-binding protein
PBONODFP_02112 3.39e-190 glnH - - ET ko:K10039 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter substrate-binding protein
PBONODFP_02113 3.14e-140 glnM - - P ko:K10040 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter permease
PBONODFP_02114 1.27e-141 glnP - - P ko:K10040 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter permease
PBONODFP_02115 2.99e-109 - - - G ko:K02777 ko00010,ko00500,ko00520,ko02026,ko02060,ko05111,map00010,map00500,map00520,map02026,map02060,map05111 ko00000,ko00001,ko00002,ko01000,ko02000 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
PBONODFP_02116 1.34e-197 - - - K ko:K03488 - ko00000,ko03000 CAT RNA binding domain
PBONODFP_02117 0.0 - - - G ko:K02755,ko:K02756,ko:K02757 ko02060,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 phosphotransferase system, EIIB
PBONODFP_02118 9.06e-182 - 3.5.1.105 - G ko:K03478 - ko00000,ko01000 YdjC-like protein
PBONODFP_02119 9.38e-317 steT - - E ko:K03294 - ko00000 amino acid
PBONODFP_02120 2.98e-94 - - - K - - - helix_turn_helix multiple antibiotic resistance protein
PBONODFP_02121 8.87e-191 - - - S - - - Sulfite exporter TauE/SafE
PBONODFP_02122 3.08e-93 - - - K - - - MarR family
PBONODFP_02123 9.23e-269 - - - EGP - - - Major Facilitator Superfamily
PBONODFP_02124 2.93e-109 - - - S ko:K07090 - ko00000 membrane transporter protein
PBONODFP_02125 1.81e-128 - - - K - - - Bacterial regulatory proteins, tetR family
PBONODFP_02126 5.95e-300 hflX - - S ko:K03665 - ko00000,ko03009 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
PBONODFP_02127 4.6e-102 rppH3 - - F - - - NUDIX domain
PBONODFP_02128 3.5e-64 sugE - - U ko:K11741 - ko00000,ko02000 Multidrug resistance protein
PBONODFP_02129 1.61e-36 - - - - - - - -
PBONODFP_02130 1.35e-165 pgm3 - - G - - - Phosphoglycerate mutase family
PBONODFP_02131 2.07e-161 gpm2 - - G - - - Phosphoglycerate mutase family
PBONODFP_02132 0.0 yjbQ - - P ko:K03455,ko:K03499 - ko00000,ko02000 TrkA C-terminal domain protein
PBONODFP_02133 1.39e-225 - 3.6.1.55 - F ko:K03574 - ko00000,ko01000,ko03400 Belongs to the Nudix hydrolase family
PBONODFP_02134 6.4e-143 - - - S ko:K03975 - ko00000 SNARE associated Golgi protein
PBONODFP_02135 8.71e-111 ribE 2.5.1.9 - H ko:K00793 ko00740,ko01100,ko01110,map00740,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Riboflavin synthase
PBONODFP_02136 1.22e-217 ribD 1.1.1.193, 3.5.4.26 - H ko:K11752 ko00740,ko01100,ko01110,ko02024,map00740,map01100,map01110,map02024 ko00000,ko00001,ko00002,ko01000 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
PBONODFP_02137 0.0 - - - S - - - membrane
PBONODFP_02138 1.64e-89 - - - S - - - NUDIX domain
PBONODFP_02139 0.0 - - - M - - - 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
PBONODFP_02140 1.15e-235 ykoT - - M - - - Glycosyl transferase family 2
PBONODFP_02141 1.18e-100 - - - S ko:K03975 - ko00000 SNARE-like domain protein
PBONODFP_02142 5.57e-168 yfdH - GT2 M ko:K12999 - ko00000,ko01000,ko01003,ko01005 Glycosyltransferase, group 2 family protein
PBONODFP_02143 7.93e-79 - 3.6.1.27 - I ko:K19302 ko00550,map00550 ko00000,ko00001,ko01000,ko01011 phosphatase
PBONODFP_02144 1.73e-134 llrE - - K - - - Transcriptional regulatory protein, C terminal
PBONODFP_02145 3.72e-203 - - - T - - - Histidine kinase
PBONODFP_02146 2.27e-98 - 2.4.2.6 - F ko:K08728 ko00240,map00240 ko00000,ko00001,ko01000 Nucleoside 2-deoxyribosyltransferase
PBONODFP_02147 2.57e-128 - - - - - - - -
PBONODFP_02148 0.0 - 1.3.5.4 - C ko:K00244 ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020 ko00000,ko00001,ko00002,ko01000 FAD binding domain
PBONODFP_02149 9.9e-144 - - - S - - - NADPH-dependent FMN reductase
PBONODFP_02150 6.59e-227 - - - K - - - LysR substrate binding domain
PBONODFP_02151 5.62e-105 mutY - - L ko:K03575 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 A G-specific adenine glycosylase
PBONODFP_02152 1.7e-70 - - - - - - - -
PBONODFP_02153 1.41e-86 yeaO - - S - - - Protein of unknown function, DUF488
PBONODFP_02154 9.97e-94 spxA - - P ko:K16509 - ko00000 ArsC family
PBONODFP_02155 2.14e-86 - - - K ko:K22296 - ko00000,ko03000 Winged helix DNA-binding domain
PBONODFP_02156 1.85e-207 - - - GM - - - NmrA-like family
PBONODFP_02157 1.65e-112 pgpA - - I - - - Phosphatidylglycerophosphatase A
PBONODFP_02158 5e-215 - - - S - - - Alpha/beta hydrolase of unknown function (DUF915)
PBONODFP_02159 9.04e-317 cycA - - E ko:K03293,ko:K11737 - ko00000,ko02000 Amino acid permease
PBONODFP_02160 0.0 nhaC - - C ko:K03315 - ko00000,ko02000 Na H antiporter NhaC
PBONODFP_02161 3.58e-36 - - - S - - - Belongs to the LOG family
PBONODFP_02162 5.84e-255 glmS2 - - M - - - SIS domain
PBONODFP_02163 0.0 ade 3.5.4.2 - F ko:K01486 ko00230,ko01100,map00230,map01100 ko00000,ko00001,ko01000 Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
PBONODFP_02164 9.53e-285 - - - S - - - Uncharacterized protein conserved in bacteria (DUF2325)
PBONODFP_02165 1.08e-82 - - - S - - - YjbR
PBONODFP_02167 0.0 cadA - - P - - - P-type ATPase
PBONODFP_02168 0.0 - - - U ko:K03451 - ko00000 Belongs to the BCCT transporter (TC 2.A.15) family
PBONODFP_02169 3.73e-157 - - - E - - - GDSL-like Lipase/Acylhydrolase family
PBONODFP_02170 0.0 cadA 3.6.3.3, 3.6.3.5 - P ko:K01534 - ko00000,ko01000 P-type ATPase
PBONODFP_02171 8.08e-184 glpF - - U ko:K02440 - ko00000,ko02000 Belongs to the MIP aquaporin (TC 1.A.8) family
PBONODFP_02172 5.73e-73 trxA3 - - O ko:K03671 ko04621,ko05418,map04621,map05418 ko00000,ko00001,ko03110 Thioredoxin-like domain
PBONODFP_02173 4.82e-55 yrkD - - S - - - Metal-sensitive transcriptional repressor
PBONODFP_02174 1.34e-26 - - - - - - - -
PBONODFP_02175 1.43e-124 dpsB - - P - - - Belongs to the Dps family
PBONODFP_02176 2.98e-44 copZ - - P - - - Heavy-metal-associated domain
PBONODFP_02177 2.59e-152 rcfA - - K ko:K21562 - ko00000,ko03000 Transcriptional regulator, Crp Fnr family
PBONODFP_02178 0.0 pepO - - O ko:K07386 - ko00000,ko01000,ko01002 Peptidase family M13
PBONODFP_02179 5.23e-107 yoaA - - J - - - COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
PBONODFP_02180 0.0 nox 1.6.3.4 - C ko:K17869 - ko00000,ko01000 NADH oxidase
PBONODFP_02181 0.0 - - - S - - - Leucine-rich repeat (LRR) protein
PBONODFP_02182 1.83e-235 - - - S - - - Cell surface protein
PBONODFP_02183 7.12e-159 - - - S - - - WxL domain surface cell wall-binding
PBONODFP_02184 4.23e-129 - - - S - - - WxL domain surface cell wall-binding
PBONODFP_02185 1.58e-59 - - - - - - - -
PBONODFP_02186 1.72e-135 yezE - - K ko:K16137 - ko00000,ko03000 Bacterial regulatory proteins, tetR family
PBONODFP_02187 1.03e-65 - - - - - - - -
PBONODFP_02188 4.16e-314 - - - S - - - Putative metallopeptidase domain
PBONODFP_02189 1.64e-282 - - - S - - - associated with various cellular activities
PBONODFP_02190 1.95e-140 aqpZ - - U ko:K06188 - ko00000,ko02000 Belongs to the MIP aquaporin (TC 1.A.8) family
PBONODFP_02191 1.45e-145 ytpR - - J ko:K06878 - ko00000 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PBONODFP_02192 2.94e-71 ytzB - - S - - - Peptidase propeptide and YPEB domain
PBONODFP_02193 4.7e-156 trmB 2.1.1.33 - J ko:K03439 - ko00000,ko01000,ko03016 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
PBONODFP_02194 7.24e-197 ytmP - - M - - - Choline/ethanolamine kinase
PBONODFP_02195 9.53e-284 ecsB - - U ko:K01992 - ko00000,ko00002,ko02000 ABC transporter
PBONODFP_02196 1.1e-174 ecsA - - V ko:K01990 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
PBONODFP_02197 3.6e-106 hit - - FG ko:K02503 - ko00000,ko04147 histidine triad
PBONODFP_02198 6.76e-73 - - - - - - - -
PBONODFP_02199 4.43e-196 prsA 5.2.1.8 - M ko:K01802,ko:K07533 - ko00000,ko01000,ko03110 Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
PBONODFP_02200 5.76e-135 - - - S - - - WxL domain surface cell wall-binding
PBONODFP_02201 1.9e-136 - - - S - - - WxL domain surface cell wall-binding
PBONODFP_02202 3.36e-248 - - - S - - - Fn3-like domain
PBONODFP_02203 4.75e-80 - - - - - - - -
PBONODFP_02204 0.0 - - - - - - - -
PBONODFP_02205 5.19e-309 npr 1.11.1.1 - C ko:K05910 - ko00000,ko01000 NADH oxidase
PBONODFP_02206 4.89e-146 - - - K - - - Bacterial regulatory proteins, tetR family
PBONODFP_02207 9.47e-151 crp2 - - K ko:K10914,ko:K21562 ko02020,ko02024,ko02025,ko02026,ko05111,map02020,map02024,map02025,map02026,map05111 ko00000,ko00001,ko03000 helix_turn_helix, cAMP Regulatory protein
PBONODFP_02208 3.39e-138 - - - - - - - -
PBONODFP_02209 5.21e-137 - - - S ko:K09962 - ko00000 Nucleotidyltransferase
PBONODFP_02210 2.48e-106 ribH 2.5.1.78 - H ko:K00794 ko00740,ko01100,ko01110,map00740,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin
PBONODFP_02211 7.3e-106 ribA 3.5.4.25, 4.1.99.12 - H ko:K02858,ko:K14652 ko00740,ko00790,ko01100,ko01110,map00740,map00790,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate
PBONODFP_02212 8.68e-118 pts21A - - G ko:K02755 ko02060,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
PBONODFP_02213 2.05e-279 - - - T - - - Diguanylate cyclase, GGDEF domain
PBONODFP_02214 3.29e-162 - - - T - - - Putative diguanylate phosphodiesterase
PBONODFP_02215 3.83e-135 nrdG 1.97.1.4 - O ko:K04068 - ko00000,ko01000 Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PBONODFP_02216 0.0 nrdD 1.1.98.6 - F ko:K21636 ko00230,ko00240,ko01100,map00230,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Ribonucleoside-triphosphate reductase
PBONODFP_02217 3.68e-107 - - - - - - - -
PBONODFP_02218 8.48e-96 def2 3.5.1.88 - J ko:K01462 - ko00000,ko01000 Removes the formyl group from the N-terminal Met of newly synthesized proteins
PBONODFP_02219 6.48e-243 apbE 2.7.1.180 - H ko:K03734 - ko00000,ko01000 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
PBONODFP_02220 1.26e-245 dus - - J - - - Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PBONODFP_02221 3.7e-30 - - - - - - - -
PBONODFP_02222 6.36e-130 - - - - - - - -
PBONODFP_02223 5.12e-212 - - - K - - - LysR substrate binding domain
PBONODFP_02224 1.24e-313 - - - P - - - Sodium:sulfate symporter transmembrane region
PBONODFP_02225 0.0 - 4.1.1.98 - H ko:K03182 ko00130,ko01100,ko01110,map00130,map01100,map01110 ko00000,ko00001,ko00002,ko01000 3-octaprenyl-4-hydroxybenzoate carboxy-lyase
PBONODFP_02226 0.0 tcaA - - S ko:K21463 - ko00000 response to antibiotic
PBONODFP_02227 1.37e-182 - - - S - - - zinc-ribbon domain
PBONODFP_02228 5.03e-176 - - - M - - - Bacterial surface protein 26-residue PARCEL repeat (3 repeats)
PBONODFP_02229 0.0 - - - M - - - Domain of unknown function (DUF5011)
PBONODFP_02230 1.17e-101 fld - - C ko:K03839 - ko00000 Flavodoxin
PBONODFP_02231 0.0 - - - - ko:K21471 - ko00000,ko01000,ko01002,ko01011 -
PBONODFP_02232 3.1e-131 - 1.5.1.40 - S ko:K06988 - ko00000,ko01000 NADP oxidoreductase coenzyme F420-dependent
PBONODFP_02233 4.12e-226 serA1 - - EH - - - D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
PBONODFP_02234 2.8e-204 - - - EG - - - EamA-like transporter family
PBONODFP_02235 1.51e-235 ykpB 1.1.1.169 - H ko:K00077 ko00770,ko01100,ko01110,map00770,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
PBONODFP_02236 5.06e-196 - - - S - - - hydrolase
PBONODFP_02237 7.63e-107 - - - - - - - -
PBONODFP_02238 1.75e-156 pgm7 - - G - - - Phosphoglycerate mutase family
PBONODFP_02239 1.4e-181 epsV - - S - - - glycosyl transferase family 2
PBONODFP_02240 6.37e-169 gntR - - K ko:K03489 - ko00000,ko03000 UTRA
PBONODFP_02241 1.86e-64 pts20B 2.7.1.196, 2.7.1.205 - G ko:K02760 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system, Lactose/Cellobiose specific IIB subunit
PBONODFP_02242 2.73e-73 celC 2.7.1.196, 2.7.1.205 - G ko:K02759 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system, Lactose Cellobiose specific IIA subunit
PBONODFP_02243 0.0 pbg5 3.2.1.86 GT1 G ko:K01223 ko00010,ko00500,map00010,map00500 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 1 family
PBONODFP_02244 1.1e-148 - - - M - - - MucBP domain
PBONODFP_02245 2.81e-118 XK27_09665 - - G ko:K15640 - ko00000 Phosphoglycerate mutase family
PBONODFP_02247 9.97e-108 - - - L - - - PFAM Integrase catalytic region
PBONODFP_02248 1.44e-33 - - - L ko:K07483,ko:K09936 ko02024,map02024 ko00000,ko00001,ko02000 Helix-turn-helix domain
PBONODFP_02249 2.38e-102 - - - N ko:K09384 - ko00000 Uncharacterized conserved protein (DUF2075)
PBONODFP_02250 0.000211 - - - N ko:K09384 - ko00000 Uncharacterized conserved protein (DUF2075)
PBONODFP_02251 0.0 pepN 3.4.11.2 - E ko:K01256 ko00480,ko01100,map00480,map01100 ko00000,ko00001,ko01000,ko01002 aminopeptidase
PBONODFP_02252 3.1e-131 - - - G - - - Glycogen debranching enzyme
PBONODFP_02253 4.46e-63 - 2.7.1.196, 2.7.1.205 - G ko:K02759 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system, Lactose/Cellobiose specific IIA subunit
PBONODFP_02254 2.11e-211 yjdB - - S - - - Domain of unknown function (DUF4767)
PBONODFP_02255 4.76e-191 yisK 3.7.1.5, 4.1.1.68 - Q ko:K05921,ko:K16164 ko00350,ko01100,ko01120,ko01220,map00350,map01100,map01120,map01220 ko00000,ko00001,ko00002,ko01000 Fumarylacetoacetate (FAA) hydrolase family
PBONODFP_02256 1.04e-94 asp2 - - S - - - Asp23 family, cell envelope-related function
PBONODFP_02257 1.1e-93 asp1 - - S - - - Asp23 family, cell envelope-related function
PBONODFP_02258 5.74e-32 - - - - - - - -
PBONODFP_02259 1.95e-116 - - - - - - - -
PBONODFP_02260 1.81e-50 ydaS - - S - - - Transglycosylase associated protein
PBONODFP_02261 0.0 XK27_09800 - - I - - - Acyltransferase family
PBONODFP_02262 5.98e-60 - - - S - - - MORN repeat
PBONODFP_02263 6.35e-69 - - - - - - - -
PBONODFP_02264 9.14e-204 - - - S - - - Domain of unknown function (DUF4767)
PBONODFP_02265 2.57e-104 - - - - - - - -
PBONODFP_02266 1.99e-21 - - - D - - - nuclear chromosome segregation
PBONODFP_02267 5.11e-186 rfbA 2.7.7.24 - H ko:K00973 ko00521,ko00523,ko00525,ko01130,map00521,map00523,map00525,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
PBONODFP_02268 1.37e-140 rfbC 5.1.3.13 - M ko:K01790 ko00521,ko00523,ko01130,map00521,map00523,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
PBONODFP_02269 2.7e-260 rfbB 4.2.1.46 - M ko:K01710 ko00521,ko00523,ko00525,ko01055,ko01130,map00521,map00523,map00525,map01055,map01130 ko00000,ko00001,ko00002,ko01000 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
PBONODFP_02270 1.52e-182 rfbD 1.1.1.133 - M ko:K00067 ko00521,ko00523,ko01130,map00521,map00523,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
PBONODFP_02271 2.55e-66 rfbP - - M ko:K13012,ko:K19428 - ko00000,ko01000,ko01005 Bacterial sugar transferase
PBONODFP_02272 4.67e-161 epsB - - M - - - biosynthesis protein
PBONODFP_02273 6.73e-160 ywqD - - D - - - Capsular exopolysaccharide family
PBONODFP_02274 7.84e-178 ywqE 3.1.3.48 - GM ko:K01104 - ko00000,ko01000 PHP domain protein
PBONODFP_02275 3.99e-120 rfbP - - M ko:K13012,ko:K19428 - ko00000,ko01000,ko01005 Bacterial sugar transferase
PBONODFP_02276 3.17e-182 rgpAc - GT4 M ko:K12996 - ko00000,ko01000,ko01003,ko01005 group 1 family protein
PBONODFP_02277 3.27e-114 - - - G - - - Glycosyltransferase Family 4
PBONODFP_02278 3.44e-118 wefC - - M - - - Stealth protein CR2, conserved region 2
PBONODFP_02279 1.33e-54 - - - M - - - group 2 family protein
PBONODFP_02280 2.66e-247 - - - L - - - Transposase and inactivated derivatives, IS30 family
PBONODFP_02282 4.3e-79 - - GT2,GT4 M ko:K07272,ko:K20444 - ko00000,ko01000,ko01003,ko01005,ko02000 Rhamnan synthesis protein F
PBONODFP_02283 1.35e-45 - 2.3.1.79 - S ko:K00661 - ko00000,ko01000 Acetyltransferase (Isoleucine patch superfamily)
PBONODFP_02284 2.28e-121 - - - S ko:K03328 - ko00000 Membrane protein involved in the export of O-antigen and teichoic acid
PBONODFP_02285 0.0 helD 3.6.4.12 - L ko:K03657 ko03420,ko03430,map03420,map03430 ko00000,ko00001,ko01000,ko03400 DNA helicase
PBONODFP_02286 1.46e-211 fabK 1.3.1.9 - S ko:K02371 ko00061,ko01100,ko01212,map00061,map01100,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 Nitronate monooxygenase
PBONODFP_02287 1.22e-227 coaA 2.7.1.33 - F ko:K00867 ko00770,ko01100,map00770,map01100 ko00000,ko00001,ko00002,ko01000 Pantothenic acid kinase
PBONODFP_02288 0.0 guaA 6.3.5.2 - F ko:K01951 ko00230,ko00983,ko01100,map00230,map00983,map01100 ko00000,ko00001,ko00002,ko01000,ko01002 Catalyzes the synthesis of GMP from XMP
PBONODFP_02289 1.08e-71 - - - - - - - -
PBONODFP_02290 5.57e-83 - - - K - - - Helix-turn-helix domain
PBONODFP_02291 0.0 - - - L - - - AAA domain
PBONODFP_02292 2.01e-149 XK27_07075 - - V ko:K07052 - ko00000 CAAX protease self-immunity
PBONODFP_02293 1.85e-75 - - - K - - - HxlR-like helix-turn-helix
PBONODFP_02294 4.73e-302 yceJ - - EGP ko:K08221 - ko00000,ko02000 transporter
PBONODFP_02295 1.14e-292 - - - S - - - Cysteine-rich secretory protein family
PBONODFP_02296 1.59e-64 - - - K - - - Cro/C1-type HTH DNA-binding domain
PBONODFP_02298 9.25e-32 - - - U - - - Preprotein translocase subunit SecB
PBONODFP_02299 4.36e-264 potD - - P ko:K11069 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter
PBONODFP_02300 5.58e-181 potC - - P ko:K11070 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter permease
PBONODFP_02301 3.14e-190 potB - - P ko:K11071 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter permease
PBONODFP_02302 5.09e-263 potA 3.6.3.30, 3.6.3.31 - P ko:K02010,ko:K11072 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
PBONODFP_02303 4.3e-124 - - - K - - - Cupin domain
PBONODFP_02304 8.08e-110 - - - S - - - ASCH
PBONODFP_02305 1.88e-111 - - - K - - - GNAT family
PBONODFP_02306 2.14e-117 - - - K - - - acetyltransferase
PBONODFP_02307 2.06e-30 - - - - - - - -
PBONODFP_02308 5.05e-79 - - - K ko:K07979 - ko00000,ko03000 helix_turn_helix gluconate operon transcriptional repressor
PBONODFP_02309 1.85e-208 - - - V ko:K01990,ko:K16921 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter
PBONODFP_02310 1.79e-242 - - - - - - - -
PBONODFP_02311 0.0 acdH 1.1.1.1, 1.2.1.10, 1.2.1.87 - C ko:K04072,ko:K13922 ko00010,ko00071,ko00350,ko00620,ko00625,ko00626,ko00640,ko00650,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00620,map00625,map00626,map00640,map00650,map01100,map01110,map01120,map01130,map01220 ko00000,ko00001,ko01000 Aldehyde dehydrogenase family
PBONODFP_02312 8.16e-207 fba 4.1.2.13, 4.1.2.29 - G ko:K01624,ko:K03339 ko00010,ko00030,ko00051,ko00562,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00562,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Fructose-1,6-bisphosphate aldolase, class II
PBONODFP_02314 2.36e-305 xylP1 - - G - - - MFS/sugar transport protein
PBONODFP_02315 1.43e-170 hflC - - O ko:K04087 - ko00000,ko00002,ko01000 prohibitin homologues
PBONODFP_02316 7.28e-42 - - - - - - - -
PBONODFP_02317 0.0 pepD2 - - E ko:K08659 - ko00000,ko01000,ko01002 Dipeptidase
PBONODFP_02318 0.0 - - - M - - - domain protein
PBONODFP_02320 1.03e-201 - - - K ko:K20480 ko02024,map02024 ko00000,ko00001,ko03000 Helix-turn-helix
PBONODFP_02321 0.0 oppA - - E ko:K02035,ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter, substratebinding protein
PBONODFP_02322 0.0 oppA - - E ko:K02035,ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter, substratebinding protein
PBONODFP_02323 3.22e-103 yiaC - - K ko:K03826 - ko00000,ko01000 Acetyltransferase (GNAT) domain
PBONODFP_02324 1.45e-278 serA 1.1.1.399, 1.1.1.95 - EH ko:K00058 ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PBONODFP_02325 7.18e-259 serC 2.6.1.52 - E ko:K00831 ko00260,ko00680,ko00750,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map00750,map01100,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
PBONODFP_02326 2.73e-147 pgm1 - - G - - - phosphoglycerate mutase
PBONODFP_02327 7.12e-229 yghZ - - C ko:K19265 - ko00000,ko01000 Aldo keto reductase family protein
PBONODFP_02328 6.33e-46 - - - - - - - -
PBONODFP_02329 1.15e-79 - - - S - - - Domain of unknown function (DU1801)
PBONODFP_02330 6.48e-210 fbpA - - K - - - Domain of unknown function (DUF814)
PBONODFP_02331 3.69e-278 ackA 2.7.2.1 - F ko:K00925 ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PBONODFP_02332 3.81e-18 - - - - - - - -
PBONODFP_02333 3.18e-77 crcB - - U ko:K06199 - ko00000,ko02000 Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PBONODFP_02334 5.66e-74 crcB - - D ko:K06199 - ko00000,ko02000 Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PBONODFP_02335 0.0 - - - S ko:K18231,ko:K19349 ko02010,map02010 br01600,ko00000,ko00001,ko01504,ko02000 ATPases associated with a variety of cellular activities
PBONODFP_02336 8.68e-150 ykoC - - P ko:K16785 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 cobalt transport
PBONODFP_02337 0.0 - - - P ko:K16786,ko:K16787 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ABC transporter
PBONODFP_02338 2.02e-131 - - - S ko:K16925 - ko00000,ko00002,ko02000 ABC transporter permease
PBONODFP_02339 2.28e-114 gpo 1.11.1.9 - O ko:K00432 ko00480,ko00590,ko04918,map00480,map00590,map04918 ko00000,ko00001,ko01000 Belongs to the glutathione peroxidase family
PBONODFP_02340 2.16e-201 dkgB - - S - - - reductase
PBONODFP_02341 3.68e-102 greA - - K ko:K03624 - ko00000,ko03021 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PBONODFP_02342 1.2e-91 - - - - - - - -
PBONODFP_02343 2.32e-43 ygzD - - K ko:K07729 - ko00000,ko03000 Transcriptional
PBONODFP_02344 3.16e-170 nagB 3.5.99.6 - G ko:K02564 ko00520,ko01100,map00520,map01100 ko00000,ko00001,ko01000 Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
PBONODFP_02346 0.0 pepD1 - - E ko:K08659 - ko00000,ko01000,ko01002 Dipeptidase
PBONODFP_02347 0.0 mtlA 2.7.1.197 - G ko:K02799,ko:K02800 ko00051,ko02060,map00051,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system, Lactose/Cellobiose specific IIB subunit
PBONODFP_02348 0.0 mtlR - - K ko:K03483 - ko00000,ko03000 Mga helix-turn-helix domain
PBONODFP_02349 5.33e-103 mtlF 2.7.1.197 - G ko:K02798 ko00051,ko02060,map00051,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PBONODFP_02350 1.06e-281 mtlD 1.1.1.17 - C ko:K00009 ko00051,map00051 ko00000,ko00001,ko01000 mannitol-1-phosphate 5-dehydrogenase activity
PBONODFP_02351 1.21e-111 - - - - - - - -
PBONODFP_02352 4.81e-76 trxA - - O ko:K03671 ko04621,ko05418,map04621,map05418 ko00000,ko00001,ko03110 Belongs to the thioredoxin family
PBONODFP_02353 2.75e-52 - - - - - - - -
PBONODFP_02354 1.22e-125 - - - - - - - -
PBONODFP_02355 2.98e-90 - - - - - - - -
PBONODFP_02356 1.2e-106 ndk 2.7.4.6 - F ko:K00940 ko00230,ko00240,ko00983,ko01100,ko01110,ko01130,ko04016,map00230,map00240,map00983,map01100,map01110,map01130,map04016 ko00000,ko00001,ko00002,ko01000,ko04131 Belongs to the NDK family
PBONODFP_02357 0.0 - - - S ko:K13730 ko05100,map05100 ko00000,ko00001 Uncharacterized protein conserved in bacteria (DUF2252)
PBONODFP_02358 1.82e-126 - - - S ko:K19784 - ko00000 NADPH-dependent FMN reductase
PBONODFP_02359 7.42e-125 cysE 2.3.1.30 - E ko:K00640 ko00270,ko00920,ko01100,ko01110,ko01120,ko01200,ko01230,ko05111,map00270,map00920,map01100,map01110,map01120,map01200,map01230,map05111 ko00000,ko00001,ko00002,ko01000 Bacterial transferase hexapeptide (six repeats)
PBONODFP_02360 1e-268 mccB 4.4.1.1, 4.4.1.2, 4.4.1.8 - E ko:K01760,ko:K17217 ko00260,ko00270,ko00450,ko00920,ko01100,ko01110,ko01130,ko01230,map00260,map00270,map00450,map00920,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 cystathionine
PBONODFP_02361 1.3e-211 mccA 2.5.1.134, 2.5.1.47 - E ko:K01738,ko:K17216 ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the cysteine synthase cystathionine beta- synthase family
PBONODFP_02362 3.89e-202 map 3.4.11.18 - E ko:K01265 - ko00000,ko01000,ko01002 Methionine Aminopeptidase
PBONODFP_02363 1.27e-181 pnuC - - H ko:K03811 - ko00000,ko02000 nicotinamide mononucleotide transporter
PBONODFP_02364 7.55e-58 - - - S - - - Protein of unknown function (DUF2089)
PBONODFP_02365 6.35e-56 - - - - - - - -
PBONODFP_02366 1.68e-166 treR - - K ko:K03486 - ko00000,ko03000 UTRA
PBONODFP_02367 0.0 treC 3.2.1.93 GH13 G ko:K01226 ko00500,map00500 ko00000,ko00001,ko01000 Alpha amylase, catalytic domain protein
PBONODFP_02368 0.0 pts4ABC - - G ko:K02755,ko:K02756,ko:K02757 ko02060,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 phosphotransferase system
PBONODFP_02369 0.0 pts5ABC - - G ko:K02755,ko:K02756,ko:K02757 ko02060,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 phosphotransferase system, EIIB
PBONODFP_02370 2.13e-184 - - - - - - - -
PBONODFP_02371 1.78e-128 ubiX 2.5.1.129 - H ko:K03186 ko00130,ko00627,ko00940,ko01100,ko01110,ko01120,ko01220,map00130,map00627,map00940,map01100,map01110,map01120,map01220 ko00000,ko00001,ko00002,ko01000 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN
PBONODFP_02372 7.84e-92 - - - - - - - -
PBONODFP_02373 8.9e-96 ywnA - - K - - - Transcriptional regulator
PBONODFP_02374 5.2e-156 - - - K - - - Bacterial regulatory proteins, tetR family
PBONODFP_02375 5.71e-301 mntH - - P ko:K03322 - ko00000,ko02000 H( )-stimulated, divalent metal cation uptake system
PBONODFP_02376 1.15e-152 - - - - - - - -
PBONODFP_02377 2.92e-57 - - - - - - - -
PBONODFP_02378 1.55e-55 - - - - - - - -
PBONODFP_02379 0.0 ydiC - - EGP - - - Major Facilitator
PBONODFP_02380 2.2e-86 - - - K - - - helix_turn_helix, mercury resistance
PBONODFP_02381 1.82e-316 hpk2 - - T - - - Histidine kinase
PBONODFP_02382 3.28e-166 rrp2 - - K - - - Transcriptional regulatory protein, C terminal
PBONODFP_02383 2.42e-65 - - - - - - - -
PBONODFP_02384 1.13e-166 yidA - - K - - - Helix-turn-helix domain, rpiR family
PBONODFP_02385 1.81e-308 licC - - G ko:K02761 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko02000 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PBONODFP_02386 6.77e-75 - - - - - - - -
PBONODFP_02387 2.87e-56 - - - - - - - -
PBONODFP_02388 1.76e-236 brpA - - K - - - Cell envelope-like function transcriptional attenuator common domain protein
PBONODFP_02389 0.0 loxD 1.1.3.15 - C ko:K00104 ko00630,ko01100,ko01110,ko01120,ko01130,map00630,map01100,map01110,map01120,map01130 ko00000,ko00001,ko01000 FAD linked oxidases, C-terminal domain
PBONODFP_02390 4.28e-63 - - - - - - - -
PBONODFP_02391 2.04e-158 ywaC 2.7.6.5 - S ko:K00951,ko:K07816 ko00230,map00230 ko00000,ko00001,ko01000 RelA SpoT domain protein
PBONODFP_02392 1.17e-135 - - - K - - - transcriptional regulator
PBONODFP_02393 0.0 ydgH - - S ko:K06994 - ko00000 MMPL family
PBONODFP_02394 8.31e-139 tag 3.2.2.20 - L ko:K01246 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 glycosylase
PBONODFP_02395 0.0 - - - S - - - Leucine-rich repeat (LRR) protein
PBONODFP_02396 1.84e-295 vex3 - - V ko:K02004 - ko00000,ko00002,ko02000 MacB-like periplasmic core domain
PBONODFP_02397 4.87e-156 vex2 - - V ko:K02003 - ko00000,ko00002,ko02000 ABC transporter
PBONODFP_02398 1.13e-171 - - - V ko:K07052 - ko00000 CAAX protease self-immunity
PBONODFP_02399 4.75e-157 - - - S ko:K07052 - ko00000 CAAX protease self-immunity
PBONODFP_02400 7.98e-80 - - - M - - - Lysin motif
PBONODFP_02401 1.43e-82 - - - M - - - LysM domain protein
PBONODFP_02402 1.71e-87 gcsH1 - - E ko:K02437 ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200 ko00000,ko00001,ko00002 Glycine cleavage H-protein
PBONODFP_02403 6.1e-227 - - - - - - - -
PBONODFP_02404 2.8e-169 - - - - - - - -
PBONODFP_02405 0.0 uvrB3 3.1.12.1 - KL ko:K07464 - ko00000,ko01000,ko02048 DEAD_2
PBONODFP_02406 4.8e-74 - - - - - - - -
PBONODFP_02407 3.74e-284 ackA 2.7.2.1 - F ko:K00925 ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PBONODFP_02408 7.61e-102 - - - S ko:K02348 - ko00000 GNAT family
PBONODFP_02409 1.24e-99 - - - K - - - Transcriptional regulator
PBONODFP_02410 9.59e-288 yumB 1.6.99.3 - C ko:K03885 ko00190,map00190 ko00000,ko00001,ko01000 NADH dehydrogenase
PBONODFP_02411 6.01e-51 - - - - - - - -
PBONODFP_02413 4.39e-40 adk 2.7.4.3 - F ko:K00939 ko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000,ko04147 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
PBONODFP_02414 1.19e-45 infA - - J ko:K02518 - ko00000,ko03012 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
PBONODFP_02415 2.28e-77 rpsM - - J ko:K02952 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
PBONODFP_02416 7.71e-82 rpsK - - J ko:K02948 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
PBONODFP_02417 1.8e-219 rpoA 2.7.7.6 - K ko:K03040 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PBONODFP_02418 7.76e-81 rplQ - - J ko:K02879 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal protein L17
PBONODFP_02419 1.02e-233 hepT 2.5.1.30, 2.5.1.83 - H ko:K00805,ko:K21275 ko00900,ko01110,map00900,map01110 ko00000,ko00001,ko01000,ko01006 Belongs to the FPP GGPP synthase family
PBONODFP_02420 1.41e-122 hepA 2.5.1.30 - S ko:K00805 ko00900,ko01110,map00900,map01110 ko00000,ko00001,ko01000,ko01006 Heptaprenyl diphosphate synthase component I
PBONODFP_02421 5.37e-112 - - - S - - - NusG domain II
PBONODFP_02422 0.0 ndh 1.6.99.3 - C ko:K03885 ko00190,map00190 ko00000,ko00001,ko01000 NADH dehydrogenase
PBONODFP_02423 3.19e-194 - - - S - - - FMN_bind
PBONODFP_02424 1.07e-264 apbE 2.7.1.180 - H ko:K03734 - ko00000,ko01000 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
PBONODFP_02425 3.42e-198 ecfA1 - - P ko:K16786 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PBONODFP_02426 2.01e-211 ecfA2 - - P ko:K16787 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PBONODFP_02427 5.86e-185 ecfT - - U ko:K16785 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PBONODFP_02428 7.21e-193 truA 5.4.99.12 - J ko:K06173 - ko00000,ko01000,ko03016 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
PBONODFP_02429 4.58e-103 rplM - - J ko:K02871 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
PBONODFP_02430 8.98e-86 rpsI - - J ko:K02996 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the universal ribosomal protein uS9 family
PBONODFP_02431 8.51e-210 yitS - - S - - - Uncharacterised protein, DegV family COG1307
PBONODFP_02432 1.33e-122 - - - S - - - Membrane
PBONODFP_02433 3.4e-85 - - - K - - - Winged helix DNA-binding domain
PBONODFP_02434 2.5e-132 - - - L - - - Integrase
PBONODFP_02435 0.0 clpE - - O ko:K03697 - ko00000,ko03110 Belongs to the ClpA ClpB family
PBONODFP_02436 5.6e-41 - - - - - - - -
PBONODFP_02437 1.24e-52 ptsH - - G ko:K11189 - ko00000,ko02000 phosphocarrier protein HPR
PBONODFP_02438 0.0 ptsI 2.7.3.9 - G ko:K08483 ko02060,map02060 ko00000,ko00001,ko01000,ko02000 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
PBONODFP_02439 2.34e-284 pimB 2.4.1.337 GT4 M ko:K19002 ko00561,ko01100,map00561,map01100 ko00000,ko00001,ko01000,ko01003 Glycosyltransferase, group 1 family protein
PBONODFP_02440 2.04e-254 cpoA 2.4.1.208 GT4 M ko:K13677,ko:K13678 ko00561,ko01100,map00561,map01100 ko00000,ko00001,ko01000,ko01003 Glycosyltransferase, group 1 family protein
PBONODFP_02441 2.16e-241 mprF - - I ko:K07027 - ko00000,ko02000 Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
PBONODFP_02442 6.56e-292 dacA2 3.4.16.4 - M ko:K07258 ko00550,ko01100,map00550,map01100 ko00000,ko00001,ko01000,ko01002,ko01011 Belongs to the peptidase S11 family
PBONODFP_02443 7.9e-289 araT - - E ko:K00841 ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Aminotransferase
PBONODFP_02444 1.56e-46 ykuJ - - S - - - Protein of unknown function (DUF1797)
PBONODFP_02445 0.0 ltaS 2.7.8.20 - M ko:K19005 ko00561,ko01100,map00561,map01100 ko00000,ko00001,ko01000 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
PBONODFP_02446 5.95e-300 secY - - U ko:K03076 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
PBONODFP_02447 1.32e-91 rplO - - J ko:K02876 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds to the 23S rRNA
PBONODFP_02448 8.44e-34 rpmD - - J ko:K02907 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal protein L30
PBONODFP_02449 5.32e-109 rpsE - - J ko:K02988 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
PBONODFP_02450 1.75e-75 rplR - - J ko:K02881 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
PBONODFP_02451 2.14e-123 rplF - - J ko:K02933 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
PBONODFP_02452 4.99e-88 rpsH - - J ko:K02994 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
PBONODFP_02453 3.53e-123 rplE - - J ko:K02931 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
PBONODFP_02454 4.1e-67 rplX - - J ko:K02895 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
PBONODFP_02455 2.98e-78 rplN - - J ko:K02874 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
PBONODFP_02456 1.14e-53 rpsQ - - J ko:K02961 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
PBONODFP_02457 1.11e-33 rpmC - - J ko:K02904 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the universal ribosomal protein uL29 family
PBONODFP_02458 8.29e-100 rplP - - J ko:K02878 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
PBONODFP_02459 5.46e-152 rpsC - - J ko:K02982 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
PBONODFP_02460 3.59e-69 rplV - - J ko:K02890 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
PBONODFP_02461 1.07e-61 rpsS - - J ko:K02965 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
PBONODFP_02462 6.61e-193 rplB - - J ko:K02886 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
PBONODFP_02463 2.27e-59 rplW - - J ko:K02892 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
PBONODFP_02464 9.83e-141 rplD - - J ko:K02926 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms part of the polypeptide exit tunnel
PBONODFP_02465 4.34e-145 rplC - - J ko:K02906 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
PBONODFP_02466 4.46e-66 rpsJ - - J ko:K02946 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Involved in the binding of tRNA to the ribosomes
PBONODFP_02467 0.0 fusA - - J ko:K02355 - ko00000,ko03012,ko03029 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
PBONODFP_02468 1.19e-107 rpsG - - J ko:K02992 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
PBONODFP_02469 4.19e-92 rpsL - - J ko:K02950 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
PBONODFP_02470 8.58e-149 comC 3.4.23.43 - NOU ko:K02236 - ko00000,ko00002,ko01000,ko02044 Bacterial Peptidase A24 N-terminal domain
PBONODFP_02471 6.52e-124 divIVA - - D ko:K04074 - ko00000,ko03036 DivIVA domain protein
PBONODFP_02472 3.41e-186 ylmH - - S - - - S4 domain protein
PBONODFP_02473 6.45e-49 ylmG - - S ko:K02221 - ko00000,ko02044 YGGT family
PBONODFP_02474 1.56e-93 sepF - - D ko:K09772 - ko00000,ko03036 Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
PBONODFP_02475 9.39e-295 ftsZ - - D ko:K03531 ko04112,map04112 ko00000,ko00001,ko02048,ko03036,ko04812 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
PBONODFP_02476 3.55e-312 ftsA - - D ko:K03590 ko04112,map04112 ko00000,ko00001,ko03036,ko04812 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
PBONODFP_02477 2.34e-208 divIB - - D ko:K03589 ko04112,map04112 ko00000,ko00001,ko03036 Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
PBONODFP_02478 5e-253 murG 2.4.1.227 GT28 M ko:K02563 ko00550,ko01100,ko01502,ko04112,map00550,map01100,map01502,map04112 ko00000,ko00001,ko01000,ko01011 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
PBONODFP_02479 0.0 murD 6.3.2.9 - M ko:K01925 ko00471,ko00550,ko01100,map00471,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
PBONODFP_02480 2.81e-231 mraY 2.7.8.13 - M ko:K01000 ko00550,ko01100,ko01502,map00550,map01100,map01502 ko00000,ko00001,ko01000,ko01011 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
PBONODFP_02481 0.0 pbpX - - M ko:K08724,ko:K12552,ko:K12556 ko00550,ko01100,ko01501,map00550,map01100,map01501 ko00000,ko00001,ko01000,ko01011 Penicillin-binding Protein
PBONODFP_02482 7.01e-76 ftsL - - D - - - Cell division protein FtsL
PBONODFP_02483 8.62e-225 rsmH 2.1.1.199 - J ko:K03438 - ko00000,ko01000,ko03009 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
PBONODFP_02484 1.35e-100 mraZ - - K ko:K03925 - ko00000 Belongs to the MraZ family
PBONODFP_02485 2.49e-73 - - - S - - - Enterocin A Immunity
PBONODFP_02486 7.41e-315 purB 4.3.2.2 - F ko:K01756 ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
PBONODFP_02487 0.0 purA 6.3.4.4 - F ko:K01939 ko00230,ko00250,ko01100,map00230,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
PBONODFP_02488 7.21e-236 guaC 1.7.1.7 - F ko:K00364 ko00230,map00230 ko00000,ko00001,ko01000 Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
PBONODFP_02489 1.45e-187 ptp2 3.1.3.48 - T ko:K01104 - ko00000,ko01000 Tyrosine phosphatase family
PBONODFP_02490 0.0 cls - - I ko:K06131 ko00564,ko01100,map00564,map01100 ko00000,ko00001,ko01000 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PBONODFP_02492 1.88e-106 - - - - - - - -
PBONODFP_02493 0.0 yhdG - - E ko:K03294 - ko00000 C-terminus of AA_permease
PBONODFP_02495 0.0 kup - - P ko:K03549 - ko00000,ko02000 Transport of potassium into the cell
PBONODFP_02496 4.34e-211 yeaB - - P - - - Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
PBONODFP_02497 2.55e-227 ydbI - - K - - - AI-2E family transporter
PBONODFP_02498 1.56e-75 ccpB - - K - - - lacI family
PBONODFP_02499 4.13e-180 - - - S - - - Sucrose-6F-phosphate phosphohydrolase
PBONODFP_02500 1.81e-160 mipB 2.2.1.2 - H ko:K00616,ko:K08314 ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Transaldolase/Fructose-6-phosphate aldolase
PBONODFP_02501 5.85e-226 - - - K - - - sugar-binding domain protein
PBONODFP_02502 0.0 pflD 2.3.1.54 - C ko:K00656 ko00620,ko00640,ko00650,ko01100,ko01120,map00620,map00640,map00650,map01100,map01120 ko00000,ko00001,ko01000 Pyruvate formate lyase-like
PBONODFP_02503 1.38e-171 rdrA - - K ko:K22103 - ko00000,ko03000 DeoR C terminal sensor domain
PBONODFP_02504 2.08e-199 - 1.97.1.4 - C ko:K04069 - ko00000,ko01000 Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PBONODFP_02505 3.16e-232 - - - GK - - - ROK family
PBONODFP_02506 8.1e-200 - - - U ko:K05340 - ko00000,ko02000 sugar transport
PBONODFP_02507 2.43e-209 rnhA 3.1.26.4 - L ko:K03469 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PBONODFP_02508 1.23e-228 iunH1 3.2.2.1 - F ko:K01239 ko00230,ko00760,ko01100,map00230,map00760,map01100 ko00000,ko00001,ko01000 nucleoside hydrolase
PBONODFP_02509 2.57e-128 - - - C - - - Nitroreductase family
PBONODFP_02510 6.04e-217 - - - S - - - Polyphosphate kinase 2 (PPK2)
PBONODFP_02512 6.4e-143 - - - D ko:K19171 - ko00000,ko02048 COG0419 ATPase involved in DNA repair
PBONODFP_02514 3.28e-240 - - - L - - - DNA or RNA helicases of superfamily II
PBONODFP_02515 1.3e-148 - - - L ko:K07482 - ko00000 Transposase and inactivated derivatives, IS30 family
PBONODFP_02516 6.8e-123 tnpR1 - - L - - - Resolvase, N terminal domain
PBONODFP_02517 7.41e-74 - - - K - - - helix_turn_helix multiple antibiotic resistance protein
PBONODFP_02518 0.0 kup - - P ko:K03549 - ko00000,ko02000 Transport of potassium into the cell
PBONODFP_02519 8.1e-199 is18 - - L - - - Integrase core domain
PBONODFP_02520 3.53e-52 - - - L ko:K07483 - ko00000 Transposase and inactivated derivatives
PBONODFP_02521 1.39e-157 pnuC - - H ko:K03811 - ko00000,ko02000 nicotinamide mononucleotide transporter
PBONODFP_02522 0.0 ram2 3.2.1.40 - G ko:K05989 - ko00000,ko01000 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain
PBONODFP_02523 1.01e-277 metE 2.1.1.14 - E ko:K00549 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 methionine synthase, vitamin-B12 independent
PBONODFP_02524 3.3e-77 - - - P ko:K03297 - ko00000,ko02000 Small Multidrug Resistance protein
PBONODFP_02525 1.97e-60 qacH - - U ko:K03297 - ko00000,ko02000 Small Multidrug Resistance protein
PBONODFP_02526 2.94e-149 hlyIII - - S ko:K11068 - ko00000,ko02042 protein, hemolysin III
PBONODFP_02527 7.27e-73 - - - K ko:K21903 - ko00000,ko03000 helix_turn_helix, Arsenical Resistance Operon Repressor
PBONODFP_02528 7.52e-207 czcD - - P ko:K16264 - ko00000,ko02000 cation diffusion facilitator family transporter
PBONODFP_02529 8.03e-28 - - - - - - - -
PBONODFP_02530 3.91e-124 tag2 3.2.2.20 - L ko:K01246 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 glycosylase
PBONODFP_02531 3.94e-271 folP 2.5.1.15 - H ko:K00796 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko00002,ko01000 dihydropteroate synthase
PBONODFP_02532 6.2e-131 folQ 3.6.1.66 - F ko:K02428 ko00230,map00230 ko00000,ko00001,ko01000 Ham1 family
PBONODFP_02533 9.16e-317 folC 6.3.2.12, 6.3.2.17 - H ko:K11754 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the folylpolyglutamate synthase family
PBONODFP_02534 1.8e-134 folE 2.7.6.3, 3.5.4.16 - F ko:K00950,ko:K01495 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko00002,ko01000 GTP cyclohydrolase 1
PBONODFP_02535 1.59e-121 folK 2.7.6.3 - H ko:K00950 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko00002,ko01000 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
PBONODFP_02536 9.61e-84 folB 1.13.11.81, 4.1.2.25, 5.1.99.8 - H ko:K01633 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
PBONODFP_02537 1.73e-108 cvpA - - S - - - Colicin V production protein
PBONODFP_02538 5.61e-216 - - - P ko:K02077 - ko00000,ko00002,ko02000 Belongs to the bacterial solute-binding protein 9 family
PBONODFP_02539 4.41e-316 - - - EGP - - - Major Facilitator
PBONODFP_02540 0.0 cshA 3.6.4.13 - F ko:K05592 ko03018,map03018 ko00000,ko00001,ko01000,ko03009,ko03019 DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
PBONODFP_02541 0.0 murF 6.3.2.10 - M ko:K01929 ko00300,ko00550,ko01100,ko01502,map00300,map00550,map01100,map01502 ko00000,ko00001,ko01000,ko01011 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
PBONODFP_02542 1.84e-189 - - - - - - - -
PBONODFP_02543 5.58e-195 htpX - - O ko:K03799 - ko00000,ko00002,ko01000,ko01002 Belongs to the peptidase M48B family
PBONODFP_02544 5.35e-121 lemA - - S ko:K03744 - ko00000 LemA family
PBONODFP_02545 3.14e-164 srtA 3.4.22.70 - M ko:K07284 - ko00000,ko01000,ko01002,ko01011 sortase family
PBONODFP_02546 2.57e-274 - - - J - - - translation release factor activity
PBONODFP_02547 1.91e-55 rpmE2 - - J ko:K02909 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal protein L31
PBONODFP_02548 6.26e-306 rho - - K ko:K03628 ko03018,map03018 ko00000,ko00001,ko03019,ko03021 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
PBONODFP_02549 2.08e-302 murA 2.5.1.7 - M ko:K00790 ko00520,ko00550,ko01100,map00520,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PBONODFP_02550 4.01e-36 - - - - - - - -
PBONODFP_02551 5.47e-39 - - - S - - - YheO-like PAS domain
PBONODFP_02552 4.26e-54 - - - - - - - -
PBONODFP_02553 4.83e-98 copR - - K ko:K02171 ko01501,map01501 ko00000,ko00001,ko00002,ko01504,ko03000 Copper transport repressor CopY TcrY
PBONODFP_02554 0.0 copB 3.6.3.3, 3.6.3.4, 3.6.3.5, 3.6.3.54 - P ko:K01533,ko:K01534,ko:K17686 ko01524,ko04016,map01524,map04016 ko00000,ko00001,ko01000 P-type ATPase
PBONODFP_02555 4.38e-243 pva2 3.5.1.24 - M ko:K01442 ko00120,ko00121,ko01100,map00120,map00121,map01100 ko00000,ko00001,ko01000 Linear amide C-N hydrolases, choloylglycine hydrolase family
PBONODFP_02556 1.47e-144 - - - S - - - VIT family
PBONODFP_02557 2.66e-155 - - - S - - - membrane
PBONODFP_02558 3.29e-203 - - - EG - - - EamA-like transporter family
PBONODFP_02559 2.52e-107 - - - S ko:K02348 - ko00000 GNAT family
PBONODFP_02560 3.57e-150 - - - GM - - - NmrA-like family
PBONODFP_02561 4.79e-21 - - - - - - - -
PBONODFP_02562 2.27e-74 - - - - - - - -
PBONODFP_02563 3.22e-103 hsp3 - - O ko:K13993 ko04141,map04141 ko00000,ko00001,ko03110 Belongs to the small heat shock protein (HSP20) family
PBONODFP_02564 1.36e-112 - - - - - - - -
PBONODFP_02565 2.11e-82 - - - - - - - -
PBONODFP_02566 4.34e-198 aatB - - ET ko:K02030 - ko00000,ko00002,ko02000 ABC transporter substrate-binding protein
PBONODFP_02567 3.17e-149 glnQ 3.6.3.21 - E ko:K02028 - ko00000,ko00002,ko01000,ko02000 ABC transporter, ATP-binding protein
PBONODFP_02568 1.89e-141 yecS_2 - - P ko:K02029,ko:K02030 - ko00000,ko00002,ko02000 ABC transporter permease
PBONODFP_02569 1.23e-187 minD - - D ko:K03609 - ko00000,ko03036,ko04812 Belongs to the ParA family
PBONODFP_02570 2.2e-149 minC - - D ko:K03610 - ko00000,ko03036,ko04812 Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization
PBONODFP_02571 9.47e-115 mreD - - M ko:K03571 - ko00000,ko03036 rod shape-determining protein MreD
PBONODFP_02572 3.76e-184 mreC - - M ko:K03570 - ko00000,ko03036 Involved in formation and maintenance of cell shape
PBONODFP_02573 1.74e-211 mreB - - D ko:K03569 - ko00000,ko02048,ko03036,ko04812 cell shape determining protein MreB
PBONODFP_02574 1.35e-149 radC - - L ko:K03630 - ko00000 DNA repair protein
PBONODFP_02575 9.46e-315 folC 6.3.2.12, 6.3.2.17 - H ko:K11754 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the folylpolyglutamate synthase family
PBONODFP_02576 0.0 valS 6.1.1.9 - J ko:K01873 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
PBONODFP_02577 3.56e-116 tpx 1.11.1.15 - O ko:K11065 - ko00000,ko01000 Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
PBONODFP_02578 4.5e-299 gshF 6.3.2.2 - H ko:K01919,ko:K16786,ko:K16787 ko00270,ko00480,ko01100,ko02010,map00270,map00480,map01100,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 Belongs to the glutamate--cysteine ligase type 1 family
PBONODFP_02579 7.66e-292 thiI 2.8.1.4 - H ko:K03151 ko00730,ko01100,ko04122,map00730,map01100,map04122 ko00000,ko00001,ko01000,ko03016 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
PBONODFP_02580 2.22e-278 iscS2 2.8.1.7 - E ko:K04487 ko00730,ko01100,ko04122,map00730,map01100,map04122 ko00000,ko00001,ko01000,ko02048,ko03016,ko03029 Aminotransferase class V
PBONODFP_02581 0.0 ezrA - - D ko:K06286 - ko00000,ko03036 modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
PBONODFP_02582 5.28e-105 yebR 1.8.4.14 - T ko:K08968 ko00270,map00270 ko00000,ko00001,ko01000 GAF domain-containing protein
PBONODFP_02583 2.15e-137 rpsD - - J ko:K02986 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
PBONODFP_02584 4.02e-145 yktB - - S - - - Belongs to the UPF0637 family
PBONODFP_02585 1.15e-104 XK27_05190 - - S - - - Protein of unknown function (DUF1694)
PBONODFP_02586 1.57e-142 - - - S - - - Protein of unknown function (DUF1648)
PBONODFP_02587 5.51e-60 - - - K - - - helix_turn_helix, Arsenical Resistance Operon Repressor
PBONODFP_02588 1.19e-289 malL 3.2.1.10 GH13 G ko:K01182 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 COG0366 Glycosidases
PBONODFP_02589 3.43e-55 - 2.7.1.191 - G ko:K02793 ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system fructose IIA component
PBONODFP_02590 5.82e-139 - - - G ko:K02796 ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060 ko00000,ko00001,ko00002,ko02000 PTS system mannose fructose sorbose family IID component
PBONODFP_02591 4.54e-132 - - - G ko:K02795 ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060 ko00000,ko00001,ko00002,ko02000 PTS system sorbose-specific iic component
PBONODFP_02592 3.79e-85 - 2.7.1.191 - G ko:K02794 ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system sorbose subfamily IIB component
PBONODFP_02593 1.31e-119 - - - K - - - Periplasmic binding proteins and sugar binding domain of LacI family
PBONODFP_02594 0.0 gshAB 6.3.2.2 - H ko:K01919 ko00270,ko00480,ko01100,map00270,map00480,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the glutamate--cysteine ligase type 1 family
PBONODFP_02595 7.27e-303 rarA - - L ko:K07478 - ko00000 recombination factor protein RarA
PBONODFP_02596 1.34e-52 - - - - - - - -
PBONODFP_02597 2.37e-107 uspA - - T - - - universal stress protein
PBONODFP_02598 6.94e-262 bla2 3.5.2.6 - V ko:K17836 ko00311,ko01130,ko01501,map00311,map01130,map01501 ko00000,ko00001,ko00002,ko01000,ko01504 Beta-lactamase enzyme family
PBONODFP_02599 4.7e-207 - - - K - - - Helix-turn-helix XRE-family like proteins
PBONODFP_02600 0.0 glpQ3 3.1.4.46 - C ko:K01126 ko00564,map00564 ko00000,ko00001,ko01000 Glycerophosphoryl diester phosphodiesterase family
PBONODFP_02601 6.54e-273 ddl 6.3.2.4 - F ko:K01921 ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502 ko00000,ko00001,ko01000,ko01011 Belongs to the D-alanine--D-alanine ligase family
PBONODFP_02602 7.55e-242 - 1.1.1.1, 1.6.5.5 - C ko:K00001,ko:K00344 ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220 ko00000,ko00001,ko01000 Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily
PBONODFP_02603 3.26e-227 - - - S - - - Protein of unknown function (DUF2785)
PBONODFP_02604 3.34e-215 hicD3 1.1.1.27 - C ko:K00016 ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922 ko00000,ko00001,ko01000,ko04147 Belongs to the LDH MDH superfamily
PBONODFP_02605 3.03e-191 metQ - - M ko:K02072,ko:K02073 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Belongs to the nlpA lipoprotein family
PBONODFP_02606 2.1e-151 metI - - U ko:K02069,ko:K02072 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter permease
PBONODFP_02607 2.24e-239 metN - - P ko:K02071 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
PBONODFP_02608 3.2e-64 gcsH2 - - E ko:K02437 ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200 ko00000,ko00001,ko00002 glycine cleavage
PBONODFP_02609 2.15e-280 rodA - - D ko:K05837 - ko00000,ko03036 Belongs to the SEDS family
PBONODFP_02610 2.54e-46 - - - S - - - Protein of unknown function (DUF2969)
PBONODFP_02611 5.3e-58 ytjA - - S ko:K08998 - ko00000 Could be involved in insertion of integral membrane proteins into the membrane
PBONODFP_02612 1.44e-230 mbl - - D ko:K03569 - ko00000,ko02048,ko03036,ko04812 Cell shape determining protein MreB Mrl
PBONODFP_02613 1.68e-132 - - - J ko:K03817 - ko00000,ko01000,ko03009 Acetyltransferase (GNAT) domain
PBONODFP_02614 2.94e-315 murA 2.5.1.7 - M ko:K00790 ko00520,ko00550,ko01100,map00520,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PBONODFP_02615 5.95e-74 atpC - - C ko:K02114 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 Produces ATP from ADP in the presence of a proton gradient across the membrane
PBONODFP_02616 0.0 atpD 3.6.3.14 - C ko:K02112 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194,ko01000 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
PBONODFP_02617 9.14e-213 atpG - - C ko:K02115 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
PBONODFP_02618 0.0 atpA 3.6.3.14 - C ko:K02111 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194,ko01000 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
PBONODFP_02619 2.03e-118 atpH - - C ko:K02113 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PBONODFP_02620 5.41e-77 atpF - - C ko:K02109 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
PBONODFP_02621 1.81e-37 atpE - - C ko:K02110 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PBONODFP_02622 4.82e-165 atpB - - C ko:K02108 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194,ko03110 it plays a direct role in the translocation of protons across the membrane
PBONODFP_02623 2.49e-294 pyrP - - F ko:K02824 - ko00000,ko02000 Permease
PBONODFP_02624 7.81e-148 upp 2.4.2.9 - F ko:K00761 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko01000 Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
PBONODFP_02625 3.04e-297 glyA 2.1.2.1 - E ko:K00600 ko00260,ko00460,ko00630,ko00670,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko01523,map00260,map00460,map00630,map00670,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map01523 ko00000,ko00001,ko00002,ko01000 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
PBONODFP_02626 4.39e-244 ywlC 2.7.7.87 - J ko:K07566 - ko00000,ko01000,ko03009,ko03016 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
PBONODFP_02627 3.44e-204 prmC 2.1.1.297 - J ko:K02493 - ko00000,ko01000,ko03012 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
PBONODFP_02628 1.88e-251 prfA - - J ko:K02835 - ko00000,ko03012 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
PBONODFP_02629 1.54e-141 tdk 2.7.1.21 - F ko:K00857 ko00240,ko00983,ko01100,map00240,map00983,map01100 ko00000,ko00001,ko01000 thymidine kinase
PBONODFP_02630 0.0 murE2 6.3.2.13 - M ko:K01928 ko00300,ko00550,map00300,map00550 ko00000,ko00001,ko01000,ko01011 Domain of unknown function (DUF1727)
PBONODFP_02631 1.06e-174 cobQ - - S ko:K07009 - ko00000 glutamine amidotransferase
PBONODFP_02632 4.95e-250 manA 5.3.1.8 - G ko:K01809 ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 mannose-6-phosphate isomerase
PBONODFP_02633 2.65e-245 ampC - - V - - - Beta-lactamase
PBONODFP_02634 2.1e-41 - - - - - - - -
PBONODFP_02635 1.9e-260 ilvE 2.6.1.42 - E ko:K00826 ko00270,ko00280,ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00270,map00280,map00290,map00770,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Branched-chain amino acid aminotransferase
PBONODFP_02636 1.33e-77 - - - - - - - -
PBONODFP_02637 6.55e-183 - - - - - - - -
PBONODFP_02638 0.0 yfiC - - V ko:K06147 - ko00000,ko02000 ABC transporter
PBONODFP_02639 0.0 ycfI - - V ko:K06147 - ko00000,ko02000 ABC transporter, ATP-binding protein
PBONODFP_02640 1.81e-85 yxeA - - S - - - Protein of unknown function (DUF1093)
PBONODFP_02641 2.96e-182 icaB - - G - - - Polysaccharide deacetylase
PBONODFP_02646 4.03e-29 - - - - - - - -
PBONODFP_02647 2.11e-59 - - - S - - - Bacteriophage holin
PBONODFP_02648 3.75e-63 - - - - - - - -
PBONODFP_02649 1.73e-254 lysA2 - - M ko:K07273 - ko00000 Glycosyl hydrolases family 25
PBONODFP_02651 7.53e-94 - - - S - - - Protein of unknown function (DUF1617)
PBONODFP_02652 0.0 - - - LM - - - DNA recombination
PBONODFP_02653 8.96e-79 - - - - - - - -
PBONODFP_02654 0.0 - - - D - - - domain protein
PBONODFP_02655 3.76e-32 - - - - - - - -
PBONODFP_02656 1.42e-83 - - - - - - - -
PBONODFP_02657 7.42e-102 - - - S - - - Phage tail tube protein, TTP
PBONODFP_02658 3.49e-72 - - - - - - - -
PBONODFP_02659 5.34e-115 - - - - - - - -
PBONODFP_02660 9.63e-68 - - - - - - - -
PBONODFP_02661 1.68e-67 - - - - - - - -
PBONODFP_02663 2.08e-222 - - - S - - - Phage major capsid protein E
PBONODFP_02664 5.72e-64 - - - - - - - -
PBONODFP_02667 3.05e-41 - - - - - - - -
PBONODFP_02668 0.0 - - - S - - - Phage Mu protein F like protein
PBONODFP_02669 0.0 - - - S - - - Phage portal protein, SPP1 Gp6-like
PBONODFP_02670 7.61e-271 - - - S - - - Terminase-like family
PBONODFP_02671 2.04e-109 - - - L ko:K07474 - ko00000 Terminase small subunit
PBONODFP_02672 8.61e-34 - - - S - - - Protein of unknown function (DUF2829)
PBONODFP_02673 1.29e-261 - - - EGP - - - Transporter, major facilitator family protein
PBONODFP_02674 4.56e-154 lacA 2.3.1.18, 2.3.1.79 - S ko:K00633,ko:K00661 - ko00000,ko01000 Maltose acetyltransferase
PBONODFP_02675 8.5e-55 - - - - - - - -
PBONODFP_02676 9.91e-17 - - - L - - - LXG domain of WXG superfamily
PBONODFP_02677 2.09e-91 - - - S - - - Immunity protein 63
PBONODFP_02678 1.18e-24 - - - - - - - -
PBONODFP_02679 2.05e-90 - - - - - - - -
PBONODFP_02680 4.14e-25 - - - U - - - nuclease activity
PBONODFP_02681 8.53e-28 - - - - - - - -
PBONODFP_02682 3.31e-52 - - - - - - - -
PBONODFP_02683 5.89e-131 - - - S - - - ankyrin repeats
PBONODFP_02684 1.24e-11 - - - S - - - Immunity protein 22
PBONODFP_02685 3.15e-229 - - - - - - - -
PBONODFP_02687 2.85e-53 - - - - - - - -
PBONODFP_02688 4.9e-49 - - - S - - - Bacteriocin-protection, YdeI or OmpD-Associated
PBONODFP_02689 2.42e-127 - - - FG - - - HIT domain
PBONODFP_02690 1.05e-223 ydhF - - S - - - Aldo keto reductase
PBONODFP_02691 8.93e-71 - - - S - - - Pfam:DUF59
PBONODFP_02692 1.12e-206 pflA 1.97.1.4 - C ko:K04069 - ko00000,ko01000 Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PBONODFP_02693 0.0 pflB 2.3.1.54 - C ko:K00656 ko00620,ko00640,ko00650,ko01100,ko01120,map00620,map00640,map00650,map01100,map01120 ko00000,ko00001,ko01000 Pyruvate formate lyase-like
PBONODFP_02694 1.87e-249 - - - V - - - Beta-lactamase
PBONODFP_02695 6.21e-124 - - - V - - - VanZ like family
PBONODFP_02697 1.07e-208 - - - K - - - Transcriptional regulator
PBONODFP_02698 2.95e-207 akr5f 1.1.1.346 - S ko:K06221 - ko00000,ko01000 reductase
PBONODFP_02699 1.42e-212 - 1.1.1.346 - S ko:K06221 - ko00000,ko01000 Oxidoreductase, aldo keto reductase family protein
PBONODFP_02700 2.45e-101 - - - K - - - Winged helix DNA-binding domain
PBONODFP_02701 0.0 ycaM - - E - - - amino acid
PBONODFP_02702 2.55e-166 aroC1 4.2.1.10 - E ko:K03785 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Type I 3-dehydroquinase
PBONODFP_02703 4.3e-44 - - - - - - - -
PBONODFP_02704 4.94e-120 repE - - K - - - Primase C terminal 1 (PriCT-1)
PBONODFP_02705 1.55e-78 - - - D - - - AAA domain
PBONODFP_02707 3.68e-295 polYB 2.7.7.7 - L ko:K02346,ko:K03502 - ko00000,ko01000,ko03400 Belongs to the DNA polymerase type-Y family
PBONODFP_02708 3.41e-47 - - - - - - - -
PBONODFP_02709 8.88e-45 - - - - - - - -
PBONODFP_02710 1.22e-62 - - - KLT - - - serine threonine protein kinase
PBONODFP_02712 1.77e-201 - - - K - - - Helix-turn-helix domain, rpiR family
PBONODFP_02713 6.09e-228 - - - S - - - Oxidoreductase family, NAD-binding Rossmann fold
PBONODFP_02714 2.68e-254 yhhX - - S - - - Oxidoreductase family, C-terminal alpha/beta domain
PBONODFP_02715 0.0 nhaP2 - - P ko:K03316 - ko00000 Sodium proton antiporter
PBONODFP_02716 0.0 dxs 2.2.1.7 - H ko:K01662 ko00730,ko00900,ko01100,ko01110,ko01130,map00730,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
PBONODFP_02717 0.0 - - - M - - - domain protein
PBONODFP_02718 2.14e-174 glpF - - U ko:K02440 - ko00000,ko02000 Belongs to the MIP aquaporin (TC 1.A.8) family
PBONODFP_02719 0.0 glpD 1.1.3.21, 1.1.5.3 - C ko:K00105,ko:K00111 ko00564,ko01110,map00564,map01110 ko00000,ko00001,ko01000 C-terminal domain of alpha-glycerophosphate oxidase
PBONODFP_02720 7.19e-110 glpK 2.7.1.30 - F ko:K00864 ko00561,ko01100,ko03320,ko04626,map00561,map01100,map03320,map04626 ko00000,ko00001,ko01000,ko04147 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
PBONODFP_02721 5.96e-100 kipI - - E ko:K06351 - ko00000 Allophanate hydrolase subunit 1
PBONODFP_02722 1.88e-111 kipA - - E ko:K06350 - ko00000 Allophanate hydrolase subunit 2
PBONODFP_02723 7.98e-47 - - - I ko:K02160 ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212 ko00000,ko00001,ko00002 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
PBONODFP_02724 2.63e-274 accC 6.3.4.14, 6.4.1.2 - I ko:K01961 ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212 ko00000,ko00001,ko00002,ko01000 Acetyl-CoA carboxylase biotin carboxylase subunit
PBONODFP_02725 1.14e-164 ycsI - - S - - - Protein of unknown function (DUF1445)
PBONODFP_02726 3.54e-141 - - - S ko:K07160 - ko00000 LamB/YcsF family
PBONODFP_02727 2.56e-235 ycsG - - P - - - Natural resistance-associated macrophage protein
PBONODFP_02728 2.42e-28 tnpA1 - - L - - - PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
PBONODFP_02731 4.97e-127 soj - - D - - - CobQ CobB MinD ParA nucleotide binding domain protein
PBONODFP_02732 3.63e-270 msmK2 - - P ko:K10112 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Belongs to the ABC transporter superfamily
PBONODFP_02733 2.14e-314 - - - G ko:K10117 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Bacterial extracellular solute-binding protein
PBONODFP_02734 4.82e-193 - - - U ko:K10118 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
PBONODFP_02735 1.67e-182 - - - U ko:K10119 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
PBONODFP_02736 3.15e-162 lmrA 3.6.3.44 - V ko:K02021,ko:K18104 ko01501,ko02010,map01501,map02010 ko00000,ko00001,ko00002,ko01000,ko01504,ko02000 ABC transporter
PBONODFP_02737 7.52e-207 ypbG 2.7.1.2 - GK ko:K00845 ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 ROK family
PBONODFP_02738 8.76e-63 - - - K - - - HxlR-like helix-turn-helix
PBONODFP_02739 2.51e-145 - - - K - - - Transcriptional regulator C-terminal region
PBONODFP_02740 3.53e-227 - 4.1.1.52 - S ko:K22213 - ko00000,ko01000 Amidohydrolase
PBONODFP_02741 1.24e-165 - - - E - - - lipolytic protein G-D-S-L family
PBONODFP_02742 1.4e-205 yicL - - EG - - - EamA-like transporter family
PBONODFP_02743 3.08e-114 mleS 1.1.1.38, 4.1.1.101 - C ko:K00027,ko:K22212 ko00620,ko01120,ko01200,ko02020,map00620,map01120,map01200,map02020 ko00000,ko00001,ko01000 Malic enzyme
PBONODFP_02744 9.09e-213 mleP2 - - S ko:K07088 - ko00000 Sodium Bile acid symporter family
PBONODFP_02745 0.0 - - - E ko:K03294 - ko00000 Amino Acid
PBONODFP_02746 4.37e-128 - - - S - - - ECF transporter, substrate-specific component
PBONODFP_02747 6.07e-33 - - - - - - - -
PBONODFP_02748 0.0 - - - S ko:K06889 - ko00000 Alpha beta
PBONODFP_02749 0.0 cydA 1.10.3.14 - C ko:K00425 ko00190,ko01100,ko02020,map00190,map01100,map02020 ko00000,ko00001,ko00002,ko01000 ubiquinol oxidase
PBONODFP_02750 7.76e-234 cydB 1.10.3.14 - C ko:K00426 ko00190,ko01100,ko02020,map00190,map01100,map02020 ko00000,ko00001,ko00002,ko01000 Cytochrome d ubiquinol oxidase subunit II
PBONODFP_02751 0.0 cydC - - CO ko:K16013 ko02010,map02010 ko00000,ko00001,ko02000 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
PBONODFP_02752 0.0 cydD - - CO ko:K16012 ko02010,map02010 ko00000,ko00001,ko02000 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
PBONODFP_02753 1.89e-208 - - - S - - - L,D-transpeptidase catalytic domain
PBONODFP_02754 2.53e-233 hepT 2.5.1.30 - H ko:K00805 ko00900,ko01110,map00900,map01110 ko00000,ko00001,ko01000,ko01006 Belongs to the FPP GGPP synthase family
PBONODFP_02755 8.5e-213 menA 2.5.1.74 - H ko:K02548 ko00130,ko01100,ko01110,map00130,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko01006 1,4-dihydroxy-2-naphthoate
PBONODFP_02756 9.47e-236 - - - S - - - Oxidoreductase family, NAD-binding Rossmann fold
PBONODFP_02757 2.8e-145 acmA 3.2.1.17, 3.2.1.96 - NU ko:K01185,ko:K01227 ko00511,map00511 ko00000,ko00001,ko01000 mannosyl-glycoprotein
PBONODFP_02758 2.01e-134 xpt 2.4.2.22 - F ko:K03816 ko00230,ko01100,ko01110,map00230,map01100,map01110 ko00000,ko00001,ko01000 Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
PBONODFP_02759 1.13e-120 yebE - - S - - - UPF0316 protein
PBONODFP_02760 1.39e-279 purK2 6.3.4.18 - F ko:K01589 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
PBONODFP_02761 0.0 pcrA 3.6.4.12 - L ko:K03657 ko03420,ko03430,map03420,map03430 ko00000,ko00001,ko01000,ko03400 ATP-dependent DNA helicase
PBONODFP_02762 0.0 ligA 6.5.1.2 - L ko:K01972 ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430 ko00000,ko00001,ko01000,ko03032,ko03400 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
PBONODFP_02763 9.48e-263 camS - - S - - - sex pheromone
PBONODFP_02764 5.11e-67 gatC 6.3.5.6, 6.3.5.7 - J ko:K02435 ko00970,ko01100,map00970,map01100 ko00000,ko00001,ko01000,ko03029 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PBONODFP_02765 0.0 gatA 6.3.5.6, 6.3.5.7 - J ko:K02433 ko00970,ko01100,map00970,map01100 ko00000,ko00001,ko01000,ko03029 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
PBONODFP_02766 0.0 gatB 6.3.5.6, 6.3.5.7 - J ko:K02434 ko00970,ko01100,map00970,map01100 ko00000,ko00001,ko01000,ko03029 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PBONODFP_02767 1.59e-242 dagK 2.7.1.107 - G ko:K07029 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 ko00000,ko00001,ko01000 Lipid kinase
PBONODFP_02768 0.0 rumA_2 2.1.1.190 - J ko:K03215 - ko00000,ko01000,ko03009 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PBONODFP_02769 5.56e-130 yobS - - K - - - Bacterial regulatory proteins, tetR family
PBONODFP_02770 0.0 yfgQ - - P ko:K12952 - ko00000,ko01000 E1-E2 ATPase
PBONODFP_02771 7.06e-307 pts13C - - G ko:K02761 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko02000 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PBONODFP_02772 2.87e-215 - - - S - - - Alpha/beta hydrolase of unknown function (DUF915)
PBONODFP_02773 6.57e-195 gntR - - K - - - rpiR family
PBONODFP_02774 4.68e-187 lys - - M ko:K07273 - ko00000 Glycosyl hydrolases family 25
PBONODFP_02775 7.34e-83 - - - S - - - Domain of unknown function (DUF4828)
PBONODFP_02776 6.22e-43 cspP - - K ko:K03704 - ko00000,ko03000 'Cold-shock' DNA-binding domain
PBONODFP_02777 2.26e-244 mocA - - S - - - Oxidoreductase
PBONODFP_02778 9.46e-315 yfmL - - L - - - DEAD DEAH box helicase
PBONODFP_02780 3.93e-99 - - - T - - - Universal stress protein family
PBONODFP_02781 5.45e-314 pts14C - - G ko:K02761 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko02000 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PBONODFP_02782 1.93e-210 - - - S - - - Alpha/beta hydrolase of unknown function (DUF915)
PBONODFP_02784 7.62e-97 - - - - - - - -
PBONODFP_02785 2.9e-139 - - - - - - - -
PBONODFP_02786 0.0 gdhA 1.4.1.4 - E ko:K00262 ko00220,ko00250,ko00910,ko01100,map00220,map00250,map00910,map01100 ko00000,ko00001,ko01000 Belongs to the Glu Leu Phe Val dehydrogenases family
PBONODFP_02787 1.63e-281 pbpX - - V - - - Beta-lactamase
PBONODFP_02788 4.75e-267 mnaA 5.1.3.14 - G ko:K01791 ko00520,ko01100,ko05111,map00520,map01100,map05111 ko00000,ko00001,ko00002,ko01000,ko01005 Belongs to the UDP-N-acetylglucosamine 2-epimerase family
PBONODFP_02789 7.42e-202 rbn - - S ko:K07058 - ko00000 Belongs to the UPF0761 family
PBONODFP_02790 3.98e-169 glpF - - U ko:K02440 - ko00000,ko02000 Belongs to the MIP aquaporin (TC 1.A.8) family
PBONODFP_02791 7.7e-43 - - - E - - - Zn peptidase
PBONODFP_02792 1.6e-35 - - - K - - - Helix-turn-helix XRE-family like proteins
PBONODFP_02794 2.94e-190 cps3J - - M - - - Domain of unknown function (DUF4422)
PBONODFP_02795 5.98e-305 cps1C - - S ko:K03328 - ko00000 Membrane protein involved in the export of O-antigen and teichoic acid
PBONODFP_02796 1.38e-155 rfbP - - M ko:K13012,ko:K19428 - ko00000,ko01000,ko01005 Bacterial sugar transferase
PBONODFP_02797 9.02e-70 - - - - - - - -
PBONODFP_02798 1.04e-45 - - - S - - - Protein of unknown function (DUF2922)
PBONODFP_02799 8.39e-38 - - - - - - - -
PBONODFP_02800 4.14e-132 - - - K - - - DNA-templated transcription, initiation
PBONODFP_02801 9.42e-169 - - - - - - - -
PBONODFP_02802 4.1e-181 recX - - S ko:K03565 - ko00000,ko03400 Regulatory protein RecX
PBONODFP_02803 6.62e-138 ygaC - - J ko:K07586 - ko00000 Belongs to the UPF0374 family
PBONODFP_02804 1.6e-169 lytE - - M - - - NlpC/P60 family
PBONODFP_02805 3.97e-64 - - - K - - - sequence-specific DNA binding
PBONODFP_02806 7.17e-39 - - - S - - - Antitoxin component of a toxin-antitoxin (TA) module
PBONODFP_02807 1.67e-166 pbpX - - V - - - Beta-lactamase
PBONODFP_02808 8.52e-215 hdhL 1.1.1.27 - C ko:K00016 ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922 ko00000,ko00001,ko01000,ko04147 Belongs to the LDH MDH superfamily
PBONODFP_02809 1.13e-257 yueF - - S - - - AI-2E family transporter
PBONODFP_02810 6.04e-94 tagD 2.7.7.39 - IM ko:K00980 ko00564,map00564 ko00000,ko00001,ko01000 Glycerol-3-phosphate cytidylyltransferase
PBONODFP_02811 2.06e-285 gntP - - EG ko:K03299 - ko00000,ko02000 Gluconate
PBONODFP_02812 0.0 gntK 2.7.1.12 - G ko:K00851 ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko01000 Belongs to the FGGY kinase family
PBONODFP_02813 1.22e-218 gntZ 1.1.1.343, 1.1.1.44 - G ko:K00033 ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Dehydrogenase
PBONODFP_02814 0.0 gshR3 1.8.1.7 - C ko:K00383 ko00480,ko04918,map00480,map04918 ko00000,ko00001,ko01000 Glutathione reductase
PBONODFP_02815 0.0 prfC - - J ko:K02837 - ko00000,ko03012 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
PBONODFP_02816 0.0 - - - - - - - -
PBONODFP_02817 2.12e-252 - - - M - - - MucBP domain
PBONODFP_02818 1.36e-208 lysR5 - - K - - - LysR substrate binding domain
PBONODFP_02819 1.01e-172 - - - S ko:K07090 - ko00000 membrane transporter protein
PBONODFP_02820 3.85e-76 ywjH - - S - - - Protein of unknown function (DUF1634)
PBONODFP_02821 0.0 oppA - - E ko:K02035,ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter, substratebinding protein
PBONODFP_02822 3.44e-210 oppB - - P ko:K15581 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC-type dipeptide oligopeptide nickel transport systems, permease components
PBONODFP_02823 3.59e-241 oppC - - EP ko:K15582 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC-type dipeptide oligopeptide nickel transport systems, permease components
PBONODFP_02824 4.86e-258 oppD - - P ko:K15583 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 Belongs to the ABC transporter superfamily
PBONODFP_02825 5.67e-231 oppF - - P ko:K10823 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 Belongs to the ABC transporter superfamily
PBONODFP_02826 1.05e-27 - - - - - - - -
PBONODFP_02827 5.52e-55 - - - K - - - HxlR-like helix-turn-helix
PBONODFP_02828 1.26e-137 yoaZ - - S - - - intracellular protease amidase
PBONODFP_02829 1.04e-59 - - - S - - - Protein of unknown function (DUF3781)
PBONODFP_02830 1.57e-279 - - - S - - - Membrane
PBONODFP_02831 5.98e-85 - - - S - - - Protein of unknown function (DUF1093)
PBONODFP_02832 3.41e-31 - - - K - - - helix_turn_helix, mercury resistance
PBONODFP_02833 6.53e-53 pcaC 4.1.1.44 - S ko:K01607 ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220 ko00000,ko00001,ko01000 Carboxymuconolactone decarboxylase family
PBONODFP_02834 5.15e-16 - - - - - - - -
PBONODFP_02835 1.92e-127 pgsA 2.7.8.5 - I ko:K00995 ko00564,ko01100,map00564,map01100 ko00000,ko00001,ko01000 Belongs to the CDP-alcohol phosphatidyltransferase class-I family
PBONODFP_02836 5.74e-172 ymfM - - S ko:K15539 - ko00000 Helix-turn-helix domain
PBONODFP_02837 3.84e-316 ymfH - - S - - - Peptidase M16
PBONODFP_02838 1.44e-295 ymfF - - S - - - Peptidase M16 inactive domain protein
PBONODFP_02839 0.0 lysC 2.7.2.4 - E ko:K00928 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the aspartokinase family
PBONODFP_02840 0.0 - - - C - - - FMN_bind
PBONODFP_02841 1.57e-150 - - - S - - - Elongation factor G-binding protein, N-terminal
PBONODFP_02842 4.95e-86 - 4.1.2.50, 4.2.3.12 - H ko:K01737 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko00002,ko01000,ko03016 6-pyruvoyl tetrahydropterin synthase
PBONODFP_02843 1.91e-156 pnb - - C - - - nitroreductase
PBONODFP_02844 2e-155 ung2 - - L - - - Uracil-DNA glycosylase
PBONODFP_02845 8.48e-215 - - - L - - - Cleaves both 3' and 5' ssDNA extremities of branched DNA structures
PBONODFP_02846 1.77e-282 mdtG - - EGP ko:K08161 - ko00000,ko02000 Transporter, major facilitator family protein
PBONODFP_02847 0.0 - - - U - - - Belongs to the purine-cytosine permease (2.A.39) family
PBONODFP_02848 8.75e-85 - - - S - - - Protein of unknown function (DUF1398)
PBONODFP_02849 8.87e-66 - - - - - - - -
PBONODFP_02850 7.21e-35 - - - - - - - -
PBONODFP_02851 8.8e-315 lmrB - - U ko:K18926 - ko00000,ko00002,ko02000 Belongs to the major facilitator superfamily
PBONODFP_02853 1.48e-168 - - - U ko:K03205 ko03070,map03070 ko00000,ko00001,ko00002,ko02044 TraM recognition site of TraD and TraG
PBONODFP_02854 6.31e-05 ligA 6.5.1.2 - L ko:K01972 ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430 ko00000,ko00001,ko01000,ko03032,ko03400 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
PBONODFP_02855 2.66e-66 - - - S - - - Protein of unknown function (DUF975)
PBONODFP_02857 0.0 malL 3.2.1.10, 3.2.1.20 GH13,GH31 G ko:K01182,ko:K01187 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 Alpha amylase, catalytic domain protein
PBONODFP_02858 5.99e-213 mleR - - K - - - LysR substrate binding domain
PBONODFP_02859 1.94e-78 - - - M - - - Collagen binding domain
PBONODFP_02860 0.0 - - - I - - - acetylesterase activity
PBONODFP_02861 4.07e-232 - - - S ko:K07035 - ko00000 Phosphotransferase system, EIIC
PBONODFP_02862 3.49e-170 - - - S ko:K06889 - ko00000 Alpha/beta hydrolase family
PBONODFP_02863 4.29e-50 - - - - - - - -
PBONODFP_02865 1.38e-53 kup - - P ko:K03549 - ko00000,ko02000 Transport of potassium into the cell
PBONODFP_02866 0.0 kup - - P ko:K03549 - ko00000,ko02000 Transport of potassium into the cell
PBONODFP_02867 4.28e-84 ndoA - - L ko:K07171 - ko00000,ko01000,ko02048 Toxic component of a toxin-antitoxin (TA) module
PBONODFP_02868 5e-275 alr 5.1.1.1 - E ko:K01775 ko00473,ko01100,ko01502,map00473,map01100,map01502 ko00000,ko00001,ko01000,ko01011 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
PBONODFP_02869 9.32e-81 acpS 2.7.8.7 - I ko:K00997 ko00770,map00770 ko00000,ko00001,ko01000 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
PBONODFP_02870 2.34e-152 - - - L - - - HIRAN domain
PBONODFP_02871 1.24e-109 - 3.6.1.55 - F ko:K03574 - ko00000,ko01000,ko03400 NUDIX domain
PBONODFP_02872 0.0 yifK - - E ko:K03293 - ko00000 Amino acid permease
PBONODFP_02873 3.8e-161 - - - - - - - -
PBONODFP_02874 5.08e-192 - - - I - - - Alpha/beta hydrolase family
PBONODFP_02875 1.06e-195 pnuC - - H ko:K03811 - ko00000,ko02000 nicotinamide mononucleotide transporter
PBONODFP_02876 1.59e-247 ysdE - - P - - - Citrate transporter
PBONODFP_02877 1.53e-212 pphA 3.1.3.16 - T ko:K07313 - ko00000,ko01000 Calcineurin-like phosphoesterase
PBONODFP_02878 2.78e-71 - - - S - - - Cupin domain
PBONODFP_02879 9.02e-66 - - - S - - - Cupin 2, conserved barrel domain protein
PBONODFP_02880 1.39e-45 yqgQ - - S - - - Bacterial protein of unknown function (DUF910)
PBONODFP_02881 2.6e-231 glcK 2.7.1.2 - G ko:K00845 ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Glucokinase
PBONODFP_02882 1.62e-141 pepE 3.4.13.21 - E ko:K05995 - ko00000,ko01000,ko01002 Belongs to the peptidase S51 family
PBONODFP_02883 6.68e-89 yqhL - - P - - - Rhodanese-like protein
PBONODFP_02884 1.44e-31 WQ51_02665 - - S - - - Protein of unknown function (DUF3042)
PBONODFP_02885 9.07e-178 glpQ 3.1.4.46 - C ko:K01126 ko00564,map00564 ko00000,ko00001,ko01000 phosphodiesterase
PBONODFP_02886 1.33e-224 miaA 2.5.1.75 - F ko:K00791 ko00908,ko01100,ko01110,map00908,map01100,map01110 ko00000,ko00001,ko01000,ko01006,ko03016 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
PBONODFP_02887 7.79e-85 glnR - - K ko:K03713,ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000,ko03000 Transcriptional regulator
PBONODFP_02888 0.0 glnA 6.3.1.2 - E ko:K01915 ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727 ko00000,ko00001,ko01000,ko04147 glutamine synthetase
PBONODFP_02889 5.08e-205 - - - - - - - -
PBONODFP_02890 1.34e-232 - - - - - - - -
PBONODFP_02891 2.92e-126 - - - S - - - Protein conserved in bacteria
PBONODFP_02892 3.11e-73 - - - - - - - -
PBONODFP_02893 2.97e-41 - - - - - - - -
PBONODFP_02896 9.81e-27 - - - - - - - -
PBONODFP_02897 4.04e-125 - - - K - - - Transcriptional regulator
PBONODFP_02898 1.55e-66 rplU - - J ko:K02888 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This protein binds to 23S rRNA in the presence of protein L20
PBONODFP_02899 7.97e-71 ysxB - - J ko:K07584 - ko00000 Cysteine protease Prp
PBONODFP_02900 2.33e-61 rpmA - - J ko:K02899 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL27 family
PBONODFP_02901 2.46e-248 pepP 3.4.11.9, 3.4.13.9 - E ko:K01262,ko:K01271 - ko00000,ko01000,ko01002 Creatinase/Prolidase N-terminal domain
PBONODFP_02902 1.43e-129 efp - - J ko:K02356 - ko00000,ko03012 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
PBONODFP_02903 1.7e-96 WQ51_04310 - - S ko:K10947 - ko00000,ko03000 Asp23 family, cell envelope-related function
PBONODFP_02904 4.86e-92 nusB - - K ko:K03625 - ko00000,ko03009,ko03021 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
PBONODFP_02905 4.82e-194 folD 1.5.1.5, 3.5.4.9 - F ko:K01491 ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
PBONODFP_02906 2.81e-313 xseA 3.1.11.6 - L ko:K03601 ko03430,map03430 ko00000,ko00001,ko01000,ko03400 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PBONODFP_02907 7.55e-44 xseB 3.1.11.6 - L ko:K03602 ko03430,map03430 ko00000,ko00001,ko01000,ko03400 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PBONODFP_02908 6.68e-206 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29 - H ko:K13789 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000,ko01006 Belongs to the FPP GGPP synthase family
PBONODFP_02909 4.49e-192 rrmJ 2.1.1.226, 2.1.1.227 - J ko:K06442 - ko00000,ko01000,ko03009 Ribosomal RNA large subunit methyltransferase J
PBONODFP_02910 5.28e-100 argR2 - - K ko:K03402 - ko00000,ko03000 Regulates arginine biosynthesis genes
PBONODFP_02911 0.0 recN - - L ko:K03631 - ko00000,ko03400 May be involved in recombinational repair of damaged DNA
PBONODFP_02912 4.51e-284 opuCA - - E ko:K05847 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter, ATP-binding protein
PBONODFP_02913 7.11e-135 opuCB - - E ko:K05846 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter permease
PBONODFP_02914 6.31e-223 opuCC - - M ko:K05845 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Periplasmic glycine betaine choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)
PBONODFP_02915 1.36e-136 opuCD - - P ko:K05846 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
PBONODFP_02916 3.51e-74 - - - - - - - -
PBONODFP_02917 6.96e-145 gmk 2.7.4.8 - F ko:K00942 ko00230,ko01100,map00230,map01100 ko00000,ko00001,ko00002,ko01000 Essential for recycling GMP and indirectly, cGMP
PBONODFP_02918 3.93e-41 rpoZ 2.7.7.6 - K ko:K03060 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
PBONODFP_02919 1.24e-278 coaBC 4.1.1.36, 6.3.2.5 - H ko:K01598,ko:K13038 ko00770,ko01100,map00770,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
PBONODFP_02920 0.0 priA - - L ko:K04066 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
PBONODFP_02921 5.2e-225 fmt 2.1.2.9 - J ko:K00604 ko00670,ko00970,map00670,map00970 ko00000,ko00001,ko01000 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
PBONODFP_02922 0.0 sun 2.1.1.176 - J ko:K03500 - ko00000,ko01000,ko03009 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
PBONODFP_02923 1.62e-173 stp 3.1.3.16 - T ko:K20074 - ko00000,ko01000,ko01009 phosphatase
PBONODFP_02924 0.0 prkC 2.7.11.1 - KLT ko:K08884,ko:K12132 - ko00000,ko01000,ko01001 serine threonine protein kinase
PBONODFP_02925 1.21e-209 rsgA 3.1.3.100 - S ko:K06949 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko01000,ko03009 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
PBONODFP_02926 5.46e-152 rpe 5.1.3.1 - G ko:K01783 ko00030,ko00040,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the ribulose-phosphate 3-epimerase family
PBONODFP_02927 1.84e-160 thiN 2.7.6.2 - H ko:K00949 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko01000 thiamine pyrophosphokinase
PBONODFP_02928 1.61e-36 rpmB - - J ko:K02902 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL28 family
PBONODFP_02929 7.09e-76 yloU - - S - - - Asp23 family, cell envelope-related function
PBONODFP_02930 0.0 yloV - - S ko:K07030 - ko00000 DAK2 domain fusion protein YloV
PBONODFP_02931 0.0 recG 3.6.4.12 - L ko:K03655 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
PBONODFP_02932 2.17e-244 plsX 2.3.1.15 - I ko:K03621 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko01004 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
PBONODFP_02933 3.33e-47 acpP - - IQ ko:K02078 - ko00000,ko00001 Carrier of the growing fatty acid chain in fatty acid biosynthesis
PBONODFP_02934 4.49e-167 rnc 3.1.26.3 - J ko:K03685 ko03008,ko05205,map03008,map05205 ko00000,ko00001,ko01000,ko03009,ko03019,ko03036 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
PBONODFP_02935 0.0 smc - - D ko:K03529 - ko00000,ko03036 Required for chromosome condensation and partitioning
PBONODFP_02936 1.1e-297 ftsY - - U ko:K03110 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
PBONODFP_02937 1.46e-77 ylxM - - S ko:K09787 - ko00000 Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
PBONODFP_02938 9.38e-301 ffh 3.6.5.4 - U ko:K03106 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko01000,ko02044 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
PBONODFP_02939 1.6e-58 rpsP - - J ko:K02959 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011,ko03029 Belongs to the bacterial ribosomal protein bS16 family
PBONODFP_02940 9.99e-53 ylqC - - S ko:K06960 - ko00000 Belongs to the UPF0109 family
PBONODFP_02941 2.24e-123 rimM - - J ko:K02860 - ko00000,ko03009 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
PBONODFP_02942 1.57e-179 trmD 2.1.1.228 - J ko:K00554 - ko00000,ko01000,ko03016 Belongs to the RNA methyltransferase TrmD family
PBONODFP_02943 3.15e-78 rplS - - J ko:K02884 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
PBONODFP_02944 6.21e-68 - - - - - - - -
PBONODFP_02945 0.0 - - - M - - - LPXTG-motif cell wall anchor domain protein
PBONODFP_02946 9.06e-112 - - - - - - - -
PBONODFP_02947 1.18e-178 ecsA_2 - - V ko:K01990 - ko00000,ko00002,ko02000 AAA domain, putative AbiEii toxin, Type IV TA system
PBONODFP_02948 0.0 XK27_00765 - - - ko:K01992 - ko00000,ko00002,ko02000 -
PBONODFP_02949 0.0 trpE 4.1.3.27 - EH ko:K01657 ko00400,ko00405,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00400,map00405,map01100,map01110,map01130,map01230,map02024,map02025 ko00000,ko00001,ko00002,ko01000 Anthranilate synthase component I, N terminal region
PBONODFP_02950 8.08e-135 trpG 4.1.3.27 - EH ko:K01658 ko00400,ko00405,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00400,map00405,map01100,map01110,map01130,map01230,map02024,map02025 ko00000,ko00001,ko00002,ko01000 Peptidase C26
PBONODFP_02951 6.02e-190 trpD 2.4.2.18, 4.1.3.27 - F ko:K00766,ko:K13497 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
PBONODFP_02952 2.39e-18 trpD 2.4.2.18, 4.1.3.27 - F ko:K00766,ko:K13497 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
PBONODFP_02953 1.66e-156 trpC 4.1.1.48, 5.3.1.24 - E ko:K01609,ko:K13498 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the TrpC family
PBONODFP_02954 6.4e-142 trpF 5.3.1.24 - E ko:K01817 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the TrpF family
PBONODFP_02955 1.79e-287 trpB 4.2.1.20, 5.3.1.24 - E ko:K01696,ko:K01817 ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
PBONODFP_02956 4.82e-183 trpA 4.2.1.20 - E ko:K01695 ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
PBONODFP_02957 4.84e-125 entB - - Q - - - Isochorismatase family
PBONODFP_02958 2.9e-226 - 1.6.5.5 - C ko:K00344 - ko00000,ko01000 Zinc-binding dehydrogenase
PBONODFP_02959 2.3e-253 adhB 1.1.1.1 - E ko:K00001 ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220 ko00000,ko00001,ko01000 alcohol dehydrogenase
PBONODFP_02960 1.09e-79 - - - S - - - Protein of unknown function (DUF1648)
PBONODFP_02961 1.38e-185 yneD - - S - - - Belongs to the short-chain dehydrogenases reductases (SDR) family
PBONODFP_02962 8.02e-230 yneE - - K - - - Transcriptional regulator
PBONODFP_02963 8.55e-99 fabZ 4.2.1.59 - I ko:K02372 ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
PBONODFP_02964 1.97e-230 fabH 2.3.1.180 - I ko:K00648 ko00061,ko01100,ko01212,map00061,map01100,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
PBONODFP_02965 1.06e-48 acpP - - IQ ko:K02078 - ko00000,ko00001 Carrier of the growing fatty acid chain in fatty acid biosynthesis
PBONODFP_02966 4.93e-215 fabD 2.3.1.39 - I ko:K00645,ko:K15327,ko:K15329 ko00061,ko00333,ko01100,ko01130,ko01212,map00061,map00333,map01100,map01130,map01212 ko00000,ko00001,ko00002,ko01000,ko01004,ko01008 Malonyl CoA-acyl carrier protein transacylase
PBONODFP_02967 1.26e-162 fabG 1.1.1.100 - IQ ko:K00059 ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 reductase
PBONODFP_02968 1.54e-289 fabF 2.3.1.179 - I ko:K09458 ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
PBONODFP_02969 2.14e-95 accB - - I ko:K02160 ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212 ko00000,ko00001,ko00002 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
PBONODFP_02970 1.71e-91 fabZ2 4.2.1.59 - I ko:K02372 ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 FabA-like domain
PBONODFP_02971 0.0 accC 6.3.4.14, 6.4.1.2 - I ko:K01961 ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212 ko00000,ko00001,ko00002,ko01000 Acetyl-CoA carboxylase biotin carboxylase subunit
PBONODFP_02972 6.43e-203 accD 2.1.3.15, 6.4.1.2 - I ko:K01963 ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212 ko00000,ko00001,ko00002,ko01000 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
PBONODFP_02973 4.82e-179 accA 2.1.3.15, 6.4.1.2 - I ko:K01962 ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212 ko00000,ko00001,ko00002,ko01000 alpha subunit
PBONODFP_02974 7.68e-174 fabI 1.3.1.10, 1.3.1.9 - I ko:K00208 ko00061,ko00333,ko00780,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01100,map01130,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 Enoyl- acyl-carrier-protein reductase NADH
PBONODFP_02975 1.75e-129 - - - H ko:K06133 ko00770,map00770 ko00000,ko00001,ko01000 Belongs to the P-Pant transferase superfamily
PBONODFP_02976 3.64e-162 - - - S ko:K07150 - ko00000 Protein of unknown function (DUF554)
PBONODFP_02977 3.73e-207 - - - K - - - LysR substrate binding domain
PBONODFP_02978 4.94e-114 ykhA - - I - - - Thioesterase superfamily
PBONODFP_02979 5.36e-247 rsgA_2 3.1.3.100 - S ko:K06949 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko01000,ko03009 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
PBONODFP_02982 0.0 dtpT - - U ko:K03305 - ko00000 amino acid peptide transporter
PBONODFP_02983 1.5e-194 - - - S - - - Calcineurin-like phosphoesterase
PBONODFP_02987 3.43e-163 comFC - - S ko:K02242 - ko00000,ko00002,ko02044 Competence protein
PBONODFP_02988 0.0 comFA - - L ko:K02240 - ko00000,ko00002,ko02044 Helicase C-terminal domain protein
PBONODFP_02989 3.7e-149 yvyE 3.4.13.9 - S ko:K01271 - ko00000,ko01000,ko01002 YigZ family
PBONODFP_02990 1.35e-261 - - - C - - - Belongs to the LDH2 MDH2 oxidoreductase family
PBONODFP_02991 6.98e-68 citX 2.7.7.61 - HI ko:K05964 ko02020,map02020 ko00000,ko00001,ko01000 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase
PBONODFP_02992 4.54e-207 mleR2 - - K - - - LysR family transcriptional regulator
PBONODFP_02993 2.65e-214 mleR - - K - - - LysR family
PBONODFP_02994 1.58e-72 nudA - - S - - - ASCH
PBONODFP_02995 5.76e-212 psaA - - P ko:K02077,ko:K11707 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Belongs to the bacterial solute-binding protein 9 family
PBONODFP_02996 8.76e-121 - - - - - - - -
PBONODFP_02997 2.72e-155 tag 3.2.2.20 - L ko:K01246 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 Methyladenine glycosylase
PBONODFP_02998 1.35e-55 - - - S - - - COG NOG38524 non supervised orthologous group
PBONODFP_03002 2.27e-204 pbg4 3.2.1.86 GT1 G ko:K01223 ko00010,ko00500,map00010,map00500 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 1 family
PBONODFP_03003 9.35e-24 - - - - - - - -
PBONODFP_03004 1.07e-26 - - - - - - - -
PBONODFP_03005 1.56e-22 - - - - - - - -
PBONODFP_03006 3.26e-24 - - - - - - - -
PBONODFP_03007 6.58e-24 - - - - - - - -
PBONODFP_03009 7.29e-247 tagO 2.7.8.33, 2.7.8.35 - M ko:K02851 - ko00000,ko01000,ko01003,ko01005 transferase
PBONODFP_03010 0.0 ydaO - - E - - - amino acid
PBONODFP_03011 0.0 groL - - O ko:K04077 ko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152 ko00000,ko00001,ko03019,ko03029,ko03110,ko04147 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
PBONODFP_03012 9.82e-55 groS - - O ko:K04078 - ko00000,ko03029,ko03110 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
PBONODFP_03013 1.68e-140 ydiL - - S ko:K07052 - ko00000 CAAX protease self-immunity
PBONODFP_03014 3.67e-154 rex - - K ko:K01926 - ko00000,ko03000 Modulates transcription in response to changes in cellular NADH NAD( ) redox state
PBONODFP_03015 0.0 ydiF - - S ko:K06158 - ko00000,ko03012 ABC transporter, ATP-binding protein
PBONODFP_03016 3.62e-249 tsaD 2.3.1.234 - J ko:K01409 - ko00000,ko01000,ko03016 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
PBONODFP_03017 5.74e-108 rimI 2.3.1.128 - K ko:K03789 - ko00000,ko01000,ko03009 This enzyme acetylates the N-terminal alanine of ribosomal protein S18
PBONODFP_03018 4.66e-131 rimI 2.3.1.128 - K ko:K03789 - ko00000,ko01000,ko03009 Ribosomal-protein-alanine acetyltransferase
PBONODFP_03019 4.43e-163 yeaZ 2.3.1.234 - O ko:K01409,ko:K14742 - ko00000,ko01000,ko03016 Universal bacterial protein YeaZ
PBONODFP_03020 3.46e-242 phnD - - P ko:K02044 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Phosphonate ABC transporter
PBONODFP_03021 9.33e-177 phnC 3.6.3.28 - P ko:K02041 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
PBONODFP_03022 5.35e-177 phnE2 - - U ko:K02042 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Phosphonate ABC transporter permease
PBONODFP_03023 3.33e-184 phnE1 - - U ko:K02042 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter permease
PBONODFP_03024 1.62e-186 phnX 3.11.1.1 - E ko:K05306 ko00440,ko01100,ko01120,map00440,map01100,map01120 ko00000,ko00001,ko01000 Belongs to the HAD-like hydrolase superfamily. PhnX family
PBONODFP_03025 2.18e-269 phnW 2.6.1.37 - E ko:K03430 ko00440,ko01100,ko01120,map00440,map01100,map01120 ko00000,ko00001,ko01000,ko01007 Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. PhnW subfamily
PBONODFP_03026 2.86e-245 galE 5.1.3.2 - M ko:K01784 ko00052,ko00520,ko01100,map00052,map00520,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the NAD(P)-dependent epimerase dehydratase family
PBONODFP_03027 3.17e-191 fat 3.1.2.21 - I ko:K01071 ko00061,ko01100,map00061,map01100 ko00000,ko00001,ko01000,ko01004 Acyl-ACP thioesterase
PBONODFP_03028 2.64e-213 rsmI 2.1.1.198 - H ko:K07056 - ko00000,ko01000,ko03009 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
PBONODFP_03029 8.46e-77 yabA - - L - - - Involved in initiation control of chromosome replication
PBONODFP_03030 2.33e-239 holB 2.7.7.7 - L ko:K02341 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase III
PBONODFP_03031 1.39e-70 yaaQ - - S - - - Cyclic-di-AMP receptor
PBONODFP_03032 2.22e-153 tmk 2.7.4.9 - F ko:K00943 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
PBONODFP_03033 1.01e-51 yaaL - - S - - - Protein of unknown function (DUF2508)
PBONODFP_03034 6.22e-140 recR - - L ko:K06187 ko03440,map03440 ko00000,ko00001,ko03400 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
PBONODFP_03035 2.05e-62 yaaK - - S ko:K09747 - ko00000 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
PBONODFP_03036 0.0 dnaX 2.7.7.7 - L ko:K02343 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PBONODFP_03037 7.57e-119 tadA 3.5.4.33 - F ko:K11991 - ko00000,ko01000,ko03016 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
PBONODFP_03038 6.7e-141 rsmC 2.1.1.172 - J ko:K00564 - ko00000,ko01000,ko03009 Methyltransferase
PBONODFP_03039 8.42e-50 nrdH - - O ko:K06191 - ko00000 Glutaredoxin
PBONODFP_03040 0.0 nrdE 1.17.4.1 - F ko:K00525 ko00230,ko00240,ko01100,map00230,map00240,map01100 ko00000,ko00001,ko00002,ko01000,ko03400 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PBONODFP_03041 2.47e-253 nrdF 1.17.4.1 - F ko:K00526 ko00230,ko00240,ko01100,map00230,map00240,map01100 ko00000,ko00001,ko00002,ko01000,ko03400 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PBONODFP_03042 5.82e-141 yvdD 3.2.2.10 - S ko:K06966 ko00230,ko00240,map00230,map00240 ko00000,ko00001,ko01000 Belongs to the LOG family
PBONODFP_03043 5.03e-50 - - - K - - - Helix-turn-helix domain
PBONODFP_03044 0.0 mprF 2.3.2.3 - S ko:K14205 ko01503,ko02020,ko05150,map01503,map02020,map05150 ko00000,ko00001,ko00002,ko01000,ko01504 Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
PBONODFP_03045 1.78e-88 - - - L - - - nuclease
PBONODFP_03046 2.04e-226 - - - F ko:K15051 - ko00000 DNA/RNA non-specific endonuclease
PBONODFP_03047 2.76e-74 rplL - - J ko:K02935 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
PBONODFP_03048 3.72e-105 rplJ - - J ko:K02864 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
PBONODFP_03049 2.69e-158 rplA - - J ko:K02863 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
PBONODFP_03050 9.76e-93 rplK - - J ko:K02867 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
PBONODFP_03051 2.81e-202 - - - S - - - Alpha/beta hydrolase of unknown function (DUF915)
PBONODFP_03052 1.89e-128 nusG - - K ko:K02601 - ko00000,ko03009,ko03021 Participates in transcription elongation, termination and antitermination
PBONODFP_03053 1e-39 secE - - U ko:K03073 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
PBONODFP_03054 4.55e-31 rpmG - - J ko:K02913 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL33 family
PBONODFP_03055 1.12e-130 sigH - - K ko:K03088,ko:K03091,ko:K12296 ko02020,ko02024,map02020,map02024 ko00000,ko00001,ko03000,ko03021 Sigma-70 region 2
PBONODFP_03056 1.75e-126 yacP - - S ko:K06962 - ko00000 YacP-like NYN domain
PBONODFP_03057 1.49e-177 trmH 2.1.1.185 - J ko:K03218 - ko00000,ko01000,ko03009 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PBONODFP_03058 1.35e-92 mrnC - - J ko:K11145 - ko00000,ko01000,ko03009 Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
PBONODFP_03059 0.0 cysS 6.1.1.16 - J ko:K01883 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the class-I aminoacyl-tRNA synthetase family
PBONODFP_03060 0.0 gltX 6.1.1.24 - J ko:K09698 ko00970,ko01100,map00970,map01100 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
PBONODFP_03061 4.91e-265 yacL - - S - - - domain protein
PBONODFP_03062 0.0 radA - - O ko:K04485 - ko00000,ko03400 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
PBONODFP_03063 9.43e-127 dut 3.6.1.23 - F ko:K01520 ko00240,ko00983,ko01100,map00240,map00983,map01100 ko00000,ko00001,ko00002,ko01000,ko03400 dUTP diphosphatase
PBONODFP_03064 5.96e-69 yjdJ - - S ko:K06975 - ko00000 GCN5-related N-acetyl-transferase
PBONODFP_03065 1.62e-158 rpiA 5.3.1.6 - G ko:K01807 ko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
PBONODFP_03066 0.0 pepC 3.4.22.40 - E ko:K01372 - ko00000,ko01000,ko01002 Peptidase C1-like family
PBONODFP_03067 1.12e-147 zmp2 - - O - - - Zinc-dependent metalloprotease
PBONODFP_03068 1.11e-164 gpmA1 5.4.2.11 - G ko:K01834 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PBONODFP_03069 4.25e-227 - - - EG - - - EamA-like transporter family
PBONODFP_03070 7.53e-215 mleP2 - - S ko:K07088 - ko00000 Transporter, auxin efflux carrier (AEC) family protein
PBONODFP_03071 2.29e-234 brpA - - K - - - Cell envelope-like function transcriptional attenuator common domain protein
PBONODFP_03072 5e-177 accA1 2.1.3.15, 6.4.1.2 - I ko:K01962 ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212 ko00000,ko00001,ko00002,ko01000 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit
PBONODFP_03073 1.49e-183 accD1 2.1.3.15, 6.4.1.2 - I ko:K01963 ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212 ko00000,ko00001,ko00002,ko01000 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
PBONODFP_03074 1.7e-315 accC1 6.3.4.14, 6.4.1.2 - I ko:K01961 ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212 ko00000,ko00001,ko00002,ko01000 Biotin carboxylase C-terminal domain
PBONODFP_03075 3.77e-84 accB1 - - I ko:K02160 ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212 ko00000,ko00001,ko00002 Biotin-requiring enzyme
PBONODFP_03076 3.15e-229 fabH 2.3.1.180 - I ko:K00648 ko00061,ko01100,ko01212,map00061,map01100,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
PBONODFP_03077 1.83e-112 manX 2.7.1.191, 2.7.1.202 - G ko:K02769,ko:K02793,ko:K02794 ko00051,ko00520,ko01100,ko01120,ko02060,map00051,map00520,map01100,map01120,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system sorbose subfamily IIB component
PBONODFP_03078 7.19e-94 levD 2.7.1.191, 2.7.1.202 - G ko:K02793,ko:K02794,ko:K11194 ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system fructose IIA component
PBONODFP_03079 0.0 levR - - K - - - Sigma-54 interaction domain
PBONODFP_03080 9.05e-85 manO - - S - - - Domain of unknown function (DUF956)
PBONODFP_03081 1.87e-219 manN - - G ko:K02796 ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060 ko00000,ko00001,ko00002,ko02000 system, mannose fructose sorbose family IID component
PBONODFP_03082 4.51e-172 manM - - G ko:K02746,ko:K02795 ko00051,ko00052,ko00520,ko01100,ko02060,map00051,map00052,map00520,map01100,map02060 ko00000,ko00001,ko00002,ko02000 PTS system
PBONODFP_03083 6.46e-218 manL 2.7.1.191, 2.7.1.202 - G ko:K02769,ko:K02793,ko:K02794 ko00051,ko00520,ko01100,ko01120,ko02060,map00051,map00520,map01100,map01120,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system sorbose subfamily IIB component
PBONODFP_03084 5.27e-210 - - - G - - - Peptidase_C39 like family
PBONODFP_03086 4.34e-31 - - - - - - - -
PBONODFP_03090 8.77e-204 thrB 2.7.1.39 - F ko:K00872 ko00260,ko01100,ko01110,ko01120,ko01230,map00260,map01100,map01110,map01120,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
PBONODFP_03091 1.71e-302 hom 1.1.1.3 - E ko:K00003 ko00260,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00270,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 homoserine dehydrogenase
PBONODFP_03092 7.89e-109 ydcK - - S ko:K03095 - ko00000 Belongs to the SprT family
PBONODFP_03093 0.0 tex - - K ko:K06959 - ko00000 Tex-like protein N-terminal domain protein
PBONODFP_03094 6.3e-95 - - - - ko:K02029,ko:K02030 - ko00000,ko00002,ko02000 -
PBONODFP_03095 0.0 pacL 3.6.3.8 - P ko:K01537 - ko00000,ko01000 P-type ATPase
PBONODFP_03096 5.27e-197 nadE 6.3.1.5 - F ko:K01916 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
PBONODFP_03097 0.0 pncB 6.3.4.21 - F ko:K00763 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko01000 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
PBONODFP_03098 3.99e-177 tagA 2.4.1.187 GT26 F ko:K05946 ko05111,map05111 ko00000,ko00001,ko01000,ko01003 Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
PBONODFP_03099 5.41e-160 yvoA_2 - - K ko:K03710 - ko00000,ko03000 UbiC transcription regulator-associated domain protein
PBONODFP_03100 2.92e-280 nagA 3.5.1.25 - G ko:K01443 ko00520,ko01130,map00520,map01130 ko00000,ko00001,ko01000 Belongs to the metallo-dependent hydrolases superfamily. NagA family
PBONODFP_03101 1.53e-44 proC 1.5.1.2 - E ko:K00286 ko00330,ko01100,ko01110,ko01130,ko01230,map00330,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline

eggNOG-mapper v2.1.12 (Database: eggNOG v5.0.2, Mar. 2021 release)