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ORF_ID	e_value	Gene_name	EC_number	CAZy	COGs	KEGG_ko	KEGG_Pathway	BRITE	Description
BNEFENCH_00001	1.66e-42	yaaA	-	-	S	ko:K14761	-	ko00000,ko03009	S4 domain protein YaaA
BNEFENCH_00002	3.04e-258	recF	-	-	L	ko:K03629	ko03440,map03440	ko00000,ko00001,ko03400	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
BNEFENCH_00003	0.0	gyrB	5.99.1.3	-	L	ko:K02470	-	ko00000,ko01000,ko03032,ko03400	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
BNEFENCH_00004	0.0	gyrA	5.99.1.3	-	L	ko:K02469	-	ko00000,ko01000,ko03032,ko03400	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
BNEFENCH_00005	5.22e-163	deoC	4.1.2.4	-	F	ko:K01619	ko00030,map00030	ko00000,ko00001,ko01000	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
BNEFENCH_00006	1.23e-96	ssb	-	-	L	ko:K03111	ko03030,ko03430,ko03440,map03030,map03430,map03440	ko00000,ko00001,ko03029,ko03032,ko03400	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
BNEFENCH_00007	1.36e-65	rpsF	-	-	J	ko:K02990	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Binds together with S18 to 16S ribosomal RNA
BNEFENCH_00008	1.54e-114	ssb	-	-	L	ko:K03111	ko03030,ko03430,ko03440,map03030,map03430,map03440	ko00000,ko00001,ko03029,ko03032,ko03400	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
BNEFENCH_00009	3.26e-48	rpsR	-	-	J	ko:K02963	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
BNEFENCH_00010	0.0	cydA	1.10.3.14	-	C	ko:K00425	ko00190,ko01100,ko02020,map00190,map01100,map02020	ko00000,ko00001,ko00002,ko01000	Cytochrome bd terminal oxidase subunit I
BNEFENCH_00011	1.9e-227	-	-	-	C	-	-	-	Cytochrome bd terminal oxidase subunit II
BNEFENCH_00012	8.07e-40	-	-	-	-	-	-	-	-
BNEFENCH_00013	2.31e-136	-	-	-	S	-	-	-	Protein of unknown function (DUF1211)
BNEFENCH_00014	0.0	-	-	-	L	-	-	-	Transposase DDE domain
BNEFENCH_00017	1.87e-191	p40	-	-	D	ko:K21471	-	ko00000,ko01000,ko01002,ko01011	CHAP domain
BNEFENCH_00018	0.0	ylbB	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter permease
BNEFENCH_00019	1.02e-164	-	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
BNEFENCH_00020	9.71e-127	-	-	-	K	-	-	-	transcriptional regulator
BNEFENCH_00021	4.35e-197	-	-	-	G	-	-	-	Sucrose-6F-phosphate phosphohydrolase
BNEFENCH_00022	1.16e-63	-	-	-	-	-	-	-	-
BNEFENCH_00025	0.0	ybfG	-	-	M	-	-	-	peptidoglycan-binding domain-containing protein
BNEFENCH_00026	1.29e-67	ybfG	-	-	M	-	-	-	peptidoglycan-binding domain-containing protein
BNEFENCH_00027	1.38e-158	-	-	-	S	ko:K07090	-	ko00000	membrane transporter protein
BNEFENCH_00028	6.97e-133	-	-	-	S	-	-	-	Protein of unknown function (DUF1211)
BNEFENCH_00029	8.19e-212	-	-	-	P	-	-	-	CorA-like Mg2+ transporter protein
BNEFENCH_00030	3.84e-145	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
BNEFENCH_00032	2.37e-306	mntH	-	-	P	ko:K03322	-	ko00000,ko02000	H( )-stimulated, divalent metal cation uptake system
BNEFENCH_00033	1.12e-67	-	-	-	-	-	-	-	-
BNEFENCH_00035	2.12e-31	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
BNEFENCH_00036	0.0	pepD	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
BNEFENCH_00037	6.62e-143	-	-	-	S	-	-	-	Membrane
BNEFENCH_00038	4.32e-133	-	-	-	-	-	-	-	-
BNEFENCH_00039	1.71e-58	-	-	-	-	-	-	-	-
BNEFENCH_00040	0.0	ybfG	-	-	M	-	-	-	peptidoglycan-binding domain-containing protein
BNEFENCH_00041	9.28e-158	azlC	-	-	E	-	-	-	branched-chain amino acid
BNEFENCH_00042	1.83e-66	azlD	-	-	S	-	-	-	Branched-chain amino acid transport protein (AzlD)
BNEFENCH_00044	2.66e-35	-	-	-	-	-	-	-	-
BNEFENCH_00045	4.53e-185	-	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
BNEFENCH_00046	6.9e-150	eda	4.1.2.14, 4.1.3.42	-	G	ko:K01625	ko00030,ko00630,ko01100,ko01120,ko01200,map00030,map00630,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	KDPG and KHG aldolase
BNEFENCH_00047	1.82e-161	kdgR	-	-	K	-	-	-	FCD domain
BNEFENCH_00049	1.35e-71	ps105	-	-	-	-	-	-	-
BNEFENCH_00050	1.08e-54	-	-	-	K	-	-	-	Transcriptional activator, Rgg GadR MutR family
BNEFENCH_00051	5.44e-100	-	-	-	K	-	-	-	Transcriptional activator, Rgg GadR MutR family
BNEFENCH_00052	0.0	-	-	-	V	ko:K06147,ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
BNEFENCH_00053	2.19e-306	-	-	-	EGP	-	-	-	Major Facilitator
BNEFENCH_00055	0.0	ydgH	-	-	S	ko:K06994	-	ko00000	MMPL family
BNEFENCH_00056	2.34e-140	-	-	-	K	ko:K22106	-	ko00000,ko03000	Tetracycline repressor, C-terminal all-alpha domain
BNEFENCH_00058	3.93e-142	opuCD	-	-	P	ko:K05846	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
BNEFENCH_00059	1.02e-221	opuCC	-	-	M	ko:K05845	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Periplasmic glycine betaine choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)
BNEFENCH_00060	2.28e-136	opuCB	-	-	E	ko:K05846	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
BNEFENCH_00061	4.51e-281	opuCA	-	-	E	ko:K05847	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter, ATP-binding protein
BNEFENCH_00062	0.000666	-	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
BNEFENCH_00064	0.0	cadA	3.6.3.3, 3.6.3.5	-	P	ko:K01534	-	ko00000,ko01000	P-type ATPase
BNEFENCH_00065	2.09e-45	copZ	-	-	P	-	-	-	Heavy-metal-associated domain
BNEFENCH_00066	4.72e-128	dpsB	-	-	P	-	-	-	Belongs to the Dps family
BNEFENCH_00067	1.23e-149	flp	-	-	K	ko:K21562	-	ko00000,ko03000	helix_turn_helix, cAMP Regulatory protein
BNEFENCH_00068	6.56e-181	trpA	4.2.1.20	-	E	ko:K01695	ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
BNEFENCH_00069	7.1e-293	trpB	4.2.1.20, 5.3.1.24	-	E	ko:K01696,ko:K01817	ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
BNEFENCH_00070	1.11e-133	trpF	5.3.1.24	-	E	ko:K01817	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the TrpF family
BNEFENCH_00071	4.43e-177	trpC	4.1.1.48, 5.3.1.24	-	E	ko:K01609,ko:K13498	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the TrpC family
BNEFENCH_00072	1.19e-233	trpD	2.4.2.18, 4.1.3.27	-	F	ko:K00766,ko:K13497	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
BNEFENCH_00073	2.07e-262	-	-	-	-	-	-	-	-
BNEFENCH_00074	0.0	-	-	-	EGP	-	-	-	Major Facilitator
BNEFENCH_00075	1.04e-139	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
BNEFENCH_00077	6.98e-155	-	-	-	-	-	-	-	-
BNEFENCH_00080	2.48e-52	-	-	-	L	ko:K07483	-	ko00000	Transposase and inactivated derivatives
BNEFENCH_00081	3.58e-202	is18	-	-	L	-	-	-	Integrase core domain
BNEFENCH_00083	7.99e-184	plnD	-	-	K	ko:K07707	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko02022	LytTr DNA-binding domain
BNEFENCH_00084	7.34e-174	-	2.7.13.3	-	T	ko:K02476,ko:K07706	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	protein histidine kinase activity
BNEFENCH_00086	0.0	comA	-	-	V	ko:K06147,ko:K06148,ko:K12292,ko:K20344	ko02010,ko02020,ko02024,map02010,map02020,map02024	ko00000,ko00001,ko01000,ko02000	ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
BNEFENCH_00087	1.88e-308	mesE	-	-	M	ko:K12293,ko:K20345	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko02000	Transport protein ComB
BNEFENCH_00088	6.92e-81	-	-	-	-	-	-	-	-
BNEFENCH_00090	0.0	-	-	-	S	-	-	-	Putative threonine/serine exporter
BNEFENCH_00091	1.42e-58	spiA	-	-	K	-	-	-	TRANSCRIPTIONal
BNEFENCH_00092	2.5e-57	-	-	-	S	-	-	-	Enterocin A Immunity
BNEFENCH_00093	6.69e-61	-	-	-	S	-	-	-	Enterocin A Immunity
BNEFENCH_00094	2.99e-176	-	-	-	-	-	-	-	-
BNEFENCH_00095	9.6e-81	-	-	-	-	-	-	-	-
BNEFENCH_00096	2.05e-72	padR	-	-	K	ko:K10947	-	ko00000,ko03000	Transcriptional regulator PadR-like family
BNEFENCH_00097	1.51e-145	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
BNEFENCH_00098	5.7e-262	-	-	-	S	-	-	-	Protein of unknown function (DUF2974)
BNEFENCH_00099	1.88e-293	-	-	-	N	ko:K09384	-	ko00000	Uncharacterized conserved protein (DUF2075)
BNEFENCH_00100	6.33e-133	-	-	-	-	-	-	-	-
BNEFENCH_00101	0.0	-	-	-	M	-	-	-	domain protein
BNEFENCH_00102	5.21e-310	-	-	-	-	-	-	-	-
BNEFENCH_00103	0.0	-	-	-	M	-	-	-	Cna protein B-type domain
BNEFENCH_00104	2.21e-189	-	3.4.22.70	-	M	ko:K07284	-	ko00000,ko01000,ko01002,ko01011	Sortase family
BNEFENCH_00105	2.79e-295	-	-	-	S	-	-	-	Membrane
BNEFENCH_00106	5.16e-55	-	-	-	-	-	-	-	-
BNEFENCH_00108	7.71e-191	proB	2.7.2.11	-	F	ko:K00931	ko00330,ko00332,ko01100,ko01130,ko01230,map00330,map00332,map01100,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
BNEFENCH_00109	5.68e-280	proA	1.2.1.41	-	E	ko:K00147	ko00330,ko00332,ko01100,ko01110,ko01130,ko01230,map00330,map00332,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
BNEFENCH_00110	8.53e-287	-	-	-	EGP	-	-	-	Transmembrane secretion effector
BNEFENCH_00111	5.02e-52	-	-	-	-	-	-	-	-
BNEFENCH_00112	1.5e-44	-	-	-	-	-	-	-	-
BNEFENCH_00114	1.59e-28	yhjA	-	-	K	-	-	-	CsbD-like
BNEFENCH_00115	6.68e-262	lctO	1.13.12.4	-	C	ko:K00467,ko:K10530	ko00620,map00620	ko00000,ko00001,ko01000	L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases
BNEFENCH_00116	5.25e-61	-	-	-	-	-	-	-	-
BNEFENCH_00117	4.51e-261	-	-	-	S	-	-	-	Bacterial low temperature requirement A protein (LtrA)
BNEFENCH_00118	2.41e-158	gpmA1	5.4.2.11	-	G	ko:K01834	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
BNEFENCH_00119	3.6e-119	ccpN	-	-	K	-	-	-	Domain in cystathionine beta-synthase and other proteins.
BNEFENCH_00121	2.25e-07	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	abc transporter atp-binding protein
BNEFENCH_00123	3.52e-176	dapB	1.17.1.8	-	E	ko:K00215	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
BNEFENCH_00124	6.02e-216	dapA	4.3.3.7	-	E	ko:K01714	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
BNEFENCH_00125	1.83e-281	hipO	3.5.1.47	-	E	ko:K05823	ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000,ko01002	Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
BNEFENCH_00126	4.4e-116	dapH	2.3.1.117, 2.3.1.89	-	E	ko:K00674,ko:K05822	ko00300,ko01100,ko01110,ko01120,ko01230,map00300,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
BNEFENCH_00127	0.0	lysA	4.1.1.20	-	E	ko:K01586	ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
BNEFENCH_00128	0.0	lysC	2.7.2.4	-	E	ko:K00928	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the aspartokinase family
BNEFENCH_00129	1.46e-240	dapF	5.1.1.7	-	E	ko:K01778	ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
BNEFENCH_00130	9.67e-250	asd	1.2.1.11	-	E	ko:K00133	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
BNEFENCH_00131	8.13e-82	-	-	-	-	-	-	-	-
BNEFENCH_00132	1.58e-96	-	-	-	L	-	-	-	NUDIX domain
BNEFENCH_00133	2.45e-188	-	-	-	EG	-	-	-	EamA-like transporter family
BNEFENCH_00134	1.05e-128	-	-	-	V	-	-	-	ABC transporter transmembrane region
BNEFENCH_00135	6.49e-123	-	-	-	S	-	-	-	Phospholipase A2
BNEFENCH_00137	1.13e-87	-	-	-	K	-	-	-	Tetracyclin repressor, C-terminal all-alpha domain
BNEFENCH_00138	2.03e-73	-	-	-	V	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 type transporter
BNEFENCH_00140	1.5e-75	-	-	-	P	-	-	-	ABC-2 family transporter protein
BNEFENCH_00141	5.51e-127	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	AAA domain, putative AbiEii toxin, Type IV TA system
BNEFENCH_00142	0.0	yybT	-	-	T	-	-	-	signaling protein consisting of a modified GGDEF domain and a DHH domain
BNEFENCH_00143	1.35e-97	rplI	-	-	J	ko:K02939	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to the 23S rRNA
BNEFENCH_00144	0.0	dnaB	3.6.4.12	-	L	ko:K02314	ko03030,ko04112,map03030,map04112	ko00000,ko00001,ko01000,ko03032	Participates in initiation and elongation during chromosome replication
BNEFENCH_00145	1.56e-275	-	-	-	-	-	-	-	-
BNEFENCH_00146	0.0	pts32BC	2.7.1.211	-	G	ko:K02808,ko:K02809,ko:K02810	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
BNEFENCH_00147	9.57e-164	murQ	4.2.1.126	-	G	ko:K07106	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
BNEFENCH_00148	1.65e-152	yleF	-	-	K	-	-	-	Helix-turn-helix domain, rpiR family
BNEFENCH_00149	7.89e-119	-	-	-	K	-	-	-	Transcriptional regulator C-terminal region
BNEFENCH_00150	7.18e-145	-	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
BNEFENCH_00151	0.0	ylbB	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter permease
BNEFENCH_00152	5.77e-214	-	4.1.1.52	-	S	ko:K22213	-	ko00000,ko01000	Amidohydrolase
BNEFENCH_00153	9.64e-317	purA	6.3.4.4	-	F	ko:K01939	ko00230,ko00250,ko01100,map00230,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
BNEFENCH_00154	0.0	cadA	3.6.3.3, 3.6.3.5	-	P	ko:K01534	-	ko00000,ko01000	P-type ATPase
BNEFENCH_00155	4.34e-75	cadC5	-	-	K	ko:K21903	-	ko00000,ko03000	helix_turn_helix, Arsenical Resistance Operon Repressor
BNEFENCH_00156	0.0	-	3.6.3.6	-	P	ko:K01535	ko00190,map00190	ko00000,ko00001,ko01000	Cation transporter/ATPase, N-terminus
BNEFENCH_00157	3.31e-204	lysR5	-	-	K	-	-	-	LysR substrate binding domain
BNEFENCH_00158	1.24e-258	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
BNEFENCH_00159	1.91e-46	-	-	-	S	-	-	-	Phospholipase_D-nuclease N-terminal
BNEFENCH_00160	2.64e-214	yxlF	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter
BNEFENCH_00161	4.41e-169	-	-	-	S	ko:K01992	-	ko00000,ko00002,ko02000	COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component
BNEFENCH_00162	0.0	nrdD	1.1.98.6	-	F	ko:K21636	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Ribonucleoside-triphosphate reductase
BNEFENCH_00164	1.9e-131	-	-	-	K	-	-	-	Bacteriophage CI repressor helix-turn-helix domain
BNEFENCH_00165	0.0	-	-	-	-	-	-	-	-
BNEFENCH_00166	6.25e-303	yvdP	-	-	C	-	-	-	COG0277 FAD FMN-containing dehydrogenases
BNEFENCH_00167	2.15e-49	-	-	-	-	-	-	-	-
BNEFENCH_00168	3.78e-57	-	-	-	S	-	-	-	Protein of unknown function (DUF2089)
BNEFENCH_00169	2.14e-233	yveB	-	-	I	-	-	-	PAP2 superfamily
BNEFENCH_00170	6.46e-267	mccF	-	-	V	-	-	-	LD-carboxypeptidase
BNEFENCH_00171	2.67e-56	-	-	-	-	-	-	-	-
BNEFENCH_00172	2.61e-261	ddl	6.3.2.4	-	F	ko:K01921	ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Belongs to the D-alanine--D-alanine ligase family
BNEFENCH_00173	2.37e-115	adaB	2.1.1.63	-	L	ko:K00567,ko:K10778,ko:K13531	-	ko00000,ko01000,ko03000,ko03400	Methyltransferase
BNEFENCH_00174	1.66e-245	ldhD3	1.1.1.28	-	CH	ko:K03778	ko00620,ko01120,map00620,map01120	ko00000,ko00001,ko01000	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BNEFENCH_00175	9.97e-59	-	-	-	-	-	-	-	-
BNEFENCH_00176	6.94e-106	-	-	-	K	-	-	-	Transcriptional regulator
BNEFENCH_00177	1.12e-204	-	1.6.5.5	-	C	ko:K00344	-	ko00000,ko01000	alcohol dehydrogenase
BNEFENCH_00178	1.09e-70	-	-	-	S	ko:K08987	-	ko00000	Protein of unknown function (DUF1304)
BNEFENCH_00179	1.7e-72	-	-	-	S	-	-	-	Protein of unknown function (DUF1516)
BNEFENCH_00180	0.0	XK27_07275	-	-	S	ko:K06901	-	ko00000,ko02000	permease
BNEFENCH_00181	1.2e-61	-	-	-	S	ko:K09004	-	ko00000	DsrE/DsrF-like family
BNEFENCH_00182	2.04e-228	mhqA	-	-	E	ko:K15975	-	ko00000	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
BNEFENCH_00183	6.64e-39	-	-	-	-	-	-	-	-
BNEFENCH_00184	2.87e-132	yoaA	-	-	J	-	-	-	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BNEFENCH_00185	0.0	-	-	-	-	-	-	-	-
BNEFENCH_00187	4.92e-168	-	-	-	S	-	-	-	WxL domain surface cell wall-binding
BNEFENCH_00188	5.61e-169	-	-	-	S	-	-	-	WxL domain surface cell wall-binding
BNEFENCH_00189	2.43e-242	ynjC	-	-	S	-	-	-	Cell surface protein
BNEFENCH_00191	0.0	-	-	-	L	-	-	-	Mga helix-turn-helix domain
BNEFENCH_00192	9.36e-229	-	-	-	S	-	-	-	Protein of unknown function (DUF805)
BNEFENCH_00193	1.1e-76	-	-	-	-	-	-	-	-
BNEFENCH_00194	0.0	rarA	-	-	L	ko:K07478	-	ko00000	recombination factor protein RarA
BNEFENCH_00195	1.07e-282	ackA	2.7.2.1	-	F	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
BNEFENCH_00196	1.93e-203	pphA	3.1.3.16	-	T	ko:K07313	-	ko00000,ko01000	Calcineurin-like phosphoesterase superfamily domain
BNEFENCH_00197	4.32e-175	-	-	-	L	ko:K07457	-	ko00000	Base excision DNA repair protein, HhH-GPD family
BNEFENCH_00198	2.32e-69	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	abc transporter atp-binding protein
BNEFENCH_00199	7.18e-72	-	-	-	-	ko:K01992	-	ko00000,ko00002,ko02000	-
BNEFENCH_00200	0.0	yhgE	-	-	V	ko:K01421	-	ko00000	domain protein
BNEFENCH_00201	4.77e-130	yobS	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
BNEFENCH_00202	0.0	bmr3	-	-	EGP	-	-	-	Major Facilitator
BNEFENCH_00204	0.0	xfp	4.1.2.22, 4.1.2.9	-	G	ko:K01621	ko00030,ko00710,ko01100,ko01120,map00030,map00710,map01100,map01120	ko00000,ko00001,ko01000	Phosphoketolase
BNEFENCH_00205	0.0	oppA	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
BNEFENCH_00206	1.62e-25	-	-	-	-	-	-	-	-
BNEFENCH_00208	4.85e-102	-	-	-	S	-	-	-	NUDIX domain
BNEFENCH_00209	3.13e-275	-	-	-	S	-	-	-	nuclear-transcribed mRNA catabolic process, no-go decay
BNEFENCH_00210	2.76e-284	-	-	-	V	-	-	-	ABC transporter transmembrane region
BNEFENCH_00211	2.53e-141	ywdE	-	-	K	ko:K20375	ko02024,map02024	ko00000,ko00001,ko03000	Helix-turn-helix XRE-family like proteins
BNEFENCH_00212	0.0	fnq20	-	-	S	-	-	-	FAD-NAD(P)-binding
BNEFENCH_00213	0.0	nox	1.6.3.4	-	C	ko:K17869	-	ko00000,ko01000	NADH oxidase
BNEFENCH_00214	6.18e-150	-	-	-	-	-	-	-	-
BNEFENCH_00215	7.29e-288	-	-	-	S	ko:K06872	-	ko00000	TPM domain
BNEFENCH_00216	5.06e-177	yunE	-	-	S	ko:K07090	-	ko00000	Sulfite exporter TauE/SafE
BNEFENCH_00217	6.45e-74	ywjH	-	-	S	-	-	-	Protein of unknown function (DUF1634)
BNEFENCH_00218	1.47e-07	-	-	-	-	-	-	-	-
BNEFENCH_00219	1.47e-116	-	-	-	-	-	-	-	-
BNEFENCH_00220	4.67e-63	-	-	-	-	-	-	-	-
BNEFENCH_00221	1.63e-109	-	-	-	C	-	-	-	Flavodoxin
BNEFENCH_00222	5.54e-50	-	-	-	-	-	-	-	-
BNEFENCH_00223	2.82e-36	-	-	-	-	-	-	-	-
BNEFENCH_00224	2.35e-218	-	1.1.1.26	-	CH	ko:K00015	ko00630,ko01100,ko01110,ko01120,map00630,map01100,map01110,map01120	ko00000,ko00001,ko01000	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BNEFENCH_00225	5.46e-14	-	-	-	S	ko:K07006	-	ko00000	Pyridoxamine 5'-phosphate oxidase
BNEFENCH_00226	1.49e-71	-	-	-	S	ko:K07006	-	ko00000	Pyridoxamine 5'-phosphate oxidase
BNEFENCH_00227	4.95e-53	-	-	-	S	-	-	-	Transglycosylase associated protein
BNEFENCH_00228	1.16e-112	-	-	-	S	-	-	-	Protein conserved in bacteria
BNEFENCH_00229	4.15e-34	-	-	-	-	-	-	-	-
BNEFENCH_00230	2.01e-89	asp23	-	-	S	-	-	-	Asp23 family, cell envelope-related function
BNEFENCH_00231	1.97e-92	asp2	-	-	S	-	-	-	Asp23 family, cell envelope-related function
BNEFENCH_00232	2.66e-147	-	-	-	S	-	-	-	Protein of unknown function (DUF969)
BNEFENCH_00233	1.42e-195	-	-	-	S	-	-	-	Protein of unknown function (DUF979)
BNEFENCH_00234	6.93e-154	pcp	3.4.19.3	-	O	ko:K01304	-	ko00000,ko01000,ko01002	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
BNEFENCH_00235	6.15e-139	-	1.5.1.40	-	S	ko:K06988	-	ko00000,ko01000	NADP oxidoreductase coenzyme F420-dependent
BNEFENCH_00236	5.48e-164	cobQ	-	-	S	ko:K07009	-	ko00000	glutamine amidotransferase
BNEFENCH_00237	4.01e-87	-	-	-	-	-	-	-	-
BNEFENCH_00238	2.27e-167	rsmG	2.1.1.170	-	J	ko:K03501	-	ko00000,ko01000,ko03009,ko03036	Specifically methylates the N7 position of a guanine in 16S rRNA
BNEFENCH_00239	7.98e-188	noc	-	-	K	ko:K03497	-	ko00000,ko03000,ko03036,ko04812	Belongs to the ParB family
BNEFENCH_00240	6.08e-177	soj	-	-	D	ko:K03496	-	ko00000,ko03036,ko04812	Sporulation initiation inhibitor
BNEFENCH_00241	1.11e-201	spo0J	-	-	K	ko:K03497	-	ko00000,ko03000,ko03036,ko04812	Belongs to the ParB family
BNEFENCH_00242	3.26e-40	yyzM	-	-	S	-	-	-	Bacterial protein of unknown function (DUF951)
BNEFENCH_00243	9.76e-237	ychF	-	-	J	ko:K06942	-	ko00000,ko03009	ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
BNEFENCH_00244	3.16e-172	-	-	-	S	-	-	-	Protein of unknown function (DUF1129)
BNEFENCH_00245	0.0	guaB	1.1.1.205	-	F	ko:K00088	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
BNEFENCH_00246	2.05e-156	-	-	-	-	-	-	-	-
BNEFENCH_00247	1.68e-156	vanR	-	-	K	-	-	-	response regulator
BNEFENCH_00248	2.81e-278	hpk31	-	-	T	-	-	-	Histidine kinase
BNEFENCH_00249	3.9e-303	dacA	3.4.16.4	-	M	ko:K01286,ko:K07258	ko00550,ko01100,map00550,map01100	ko00000,ko00001,ko01000,ko01002,ko01011	Belongs to the peptidase S11 family
BNEFENCH_00250	1.02e-103	greA	-	-	K	ko:K03624	-	ko00000,ko03021	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
BNEFENCH_00251	0.0	murE	6.3.2.13, 6.3.2.7	-	M	ko:K01928,ko:K05362	ko00300,ko00550,ko01100,map00300,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
BNEFENCH_00252	2.71e-182	racD	5.1.1.13	-	G	ko:K01779	ko00250,ko01054,map00250,map01054	ko00000,ko00001,ko01000	Belongs to the aspartate glutamate racemases family
BNEFENCH_00253	1.59e-208	yvgN	-	-	C	-	-	-	Aldo keto reductase
BNEFENCH_00254	7.14e-187	iolR	-	-	K	ko:K06608,ko:K11534	-	ko00000,ko03000	COG1349 Transcriptional regulators of sugar metabolism
BNEFENCH_00255	0.0	iolT	-	-	EGP	ko:K06609	-	ko00000,ko02000	Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family
BNEFENCH_00256	0.0	iolA	1.2.1.18, 1.2.1.27	-	C	ko:K00140	ko00280,ko00410,ko00562,ko00640,ko01100,ko01200,map00280,map00410,map00562,map00640,map01100,map01200	ko00000,ko00001,ko00002,ko01000	Belongs to the aldehyde dehydrogenase family
BNEFENCH_00257	1.2e-200	iolB	5.3.1.30	-	G	ko:K03337	ko00562,ko01100,ko01120,map00562,map01100,map01120	ko00000,ko00001,ko01000	Involved in the isomerization of 5-deoxy-glucuronate (5DG) to 5-dehydro-2-deoxy-D-gluconate (DKG or 2-deoxy-5-keto-D- gluconate)
BNEFENCH_00258	2.68e-227	iolC	2.7.1.92	-	H	ko:K03338	ko00562,ko01100,ko01120,map00562,map01100,map01120	ko00000,ko00001,ko01000	Catalyzes the phosphorylation of 5-dehydro-2-deoxy-D- gluconate (2-deoxy-5-keto-D-gluconate or DKG) to 6-phospho-5- dehydro-2-deoxy-D-gluconate (DKGP)
BNEFENCH_00259	0.0	iolD	3.7.1.22	-	E	ko:K03336	ko00562,ko01100,ko01120,map00562,map01100,map01120	ko00000,ko00001,ko01000	Involved in the cleavage of the C1-C2 bond of 3D- (3,5 4)-trihydroxycyclohexane-1,2-dione (THcHDO) to yield 5-deoxy- glucuronate (5DG)
BNEFENCH_00260	9.62e-247	-	1.1.1.18, 1.1.1.369	-	S	ko:K00010	ko00521,ko00562,ko01100,ko01120,ko01130,map00521,map00562,map01100,map01120,map01130	ko00000,ko00001,ko01000	Oxidoreductase family, NAD-binding Rossmann fold
BNEFENCH_00261	3.93e-248	iolG2	1.1.1.18, 1.1.1.369	-	S	ko:K00010	ko00521,ko00562,ko01100,ko01120,ko01130,map00521,map00562,map01100,map01120,map01130	ko00000,ko00001,ko01000	Oxidoreductase family, C-terminal alpha/beta domain
BNEFENCH_00262	4.25e-222	iolE	4.2.1.44	-	G	ko:K03335	ko00562,ko01100,ko01120,map00562,map01100,map01120	ko00000,ko00001,ko01000	Catalyzes the dehydration of inosose (2-keto-myo- inositol, 2KMI or 2,4,6 3,5-pentahydroxycyclohexanone) to 3D- (3,5 4)-trihydroxycyclohexane-1,2-dione (D-2,3-diketo-4-deoxy-epi- inositol)
BNEFENCH_00263	1.4e-204	iolJ	4.1.2.13, 4.1.2.29	-	G	ko:K01624,ko:K03339	ko00010,ko00030,ko00051,ko00562,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00562,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Fructose-bisphosphate aldolase class-II
BNEFENCH_00264	8.67e-88	yodA	-	-	S	-	-	-	Tautomerase enzyme
BNEFENCH_00265	1.27e-186	gntR	-	-	K	-	-	-	rpiR family
BNEFENCH_00266	1.21e-215	gntZ	1.1.1.343, 1.1.1.44	-	G	ko:K00033	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Dehydrogenase
BNEFENCH_00267	0.0	gntK	2.7.1.12	-	G	ko:K00851	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko01000	Belongs to the FGGY kinase family
BNEFENCH_00268	1.86e-107	gntP	-	-	EG	ko:K03299	-	ko00000,ko02000	Gluconate
BNEFENCH_00269	1.93e-152	gntP	-	-	EG	ko:K03299	-	ko00000,ko02000	Gluconate
BNEFENCH_00270	3.74e-75	-	-	-	-	-	-	-	-
BNEFENCH_00271	3.39e-166	adcC	-	-	P	ko:K02074,ko:K09817,ko:K11710	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter
BNEFENCH_00272	4.21e-173	znuB	-	-	U	ko:K02075,ko:K09816	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC 3 transport family
BNEFENCH_00273	6.26e-211	prpA3	3.1.3.16	-	T	ko:K01090	-	ko00000,ko01000	Calcineurin-like phosphoesterase superfamily domain
BNEFENCH_00274	3.73e-206	glxR	1.1.1.31	-	I	ko:K00020	ko00280,ko01100,map00280,map01100	ko00000,ko00001,ko01000	Dehydrogenase
BNEFENCH_00275	0.0	pepF	-	-	E	ko:K08602	-	ko00000,ko01000,ko01002	oligoendopeptidase F
BNEFENCH_00276	1.39e-239	brpA	-	-	K	-	-	-	Cell envelope-like function transcriptional attenuator common domain protein
BNEFENCH_00277	9.22e-225	brnQ	-	-	U	ko:K03311	-	ko00000	Component of the transport system for branched-chain amino acids
BNEFENCH_00278	1.04e-68	brnQ	-	-	U	ko:K03311	-	ko00000	Component of the transport system for branched-chain amino acids
BNEFENCH_00279	3.46e-103	-	-	-	T	-	-	-	Sh3 type 3 domain protein
BNEFENCH_00280	1.55e-173	glcR	-	-	K	ko:K22103	-	ko00000,ko03000	DeoR C terminal sensor domain
BNEFENCH_00281	2.32e-188	-	-	-	M	-	-	-	Glycosyltransferase like family 2
BNEFENCH_00282	1.8e-173	-	-	-	S	-	-	-	Protein of unknown function (DUF975)
BNEFENCH_00283	4.42e-54	-	-	-	-	-	-	-	-
BNEFENCH_00284	1.26e-139	lepB	3.4.21.89	-	U	ko:K03100	ko02024,ko03060,map02024,map03060	ko00000,ko00001,ko01000,ko01002	Belongs to the peptidase S26 family
BNEFENCH_00285	4.8e-223	draG	-	-	O	-	-	-	ADP-ribosylglycohydrolase
BNEFENCH_00286	0.0	-	-	-	S	-	-	-	ABC transporter
BNEFENCH_00287	1.19e-174	ypaC	-	-	Q	-	-	-	Methyltransferase domain
BNEFENCH_00288	3.02e-71	trxA	-	-	O	ko:K03671	ko04621,ko05418,map04621,map05418	ko00000,ko00001,ko03110	Belongs to the thioredoxin family
BNEFENCH_00289	2.2e-176	-	-	-	S	-	-	-	Putative threonine/serine exporter
BNEFENCH_00290	2.51e-98	-	-	-	S	-	-	-	Threonine/Serine exporter, ThrE
BNEFENCH_00291	2.29e-273	livJ	-	-	E	ko:K01999	ko02010,ko02024,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Receptor family ligand binding region
BNEFENCH_00292	1.04e-191	livH	-	-	U	ko:K01997	ko02010,ko02024,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Branched-chain amino acid transport system / permease component
BNEFENCH_00293	3.16e-182	livM	-	-	E	ko:K01997,ko:K01998	ko02010,ko02024,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Branched-chain amino acid transport system / permease component
BNEFENCH_00294	3.01e-180	livG	-	-	E	ko:K01995	ko02010,ko02024,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Branched-chain amino acid ATP-binding cassette transporter
BNEFENCH_00295	1.16e-159	livF	-	-	E	ko:K01996	ko02010,ko02024,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter
BNEFENCH_00296	7.59e-214	-	-	-	S	-	-	-	Alpha/beta hydrolase of unknown function (DUF915)
BNEFENCH_00297	4.56e-303	pts14C	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
BNEFENCH_00298	4.1e-152	-	-	-	G	-	-	-	Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
BNEFENCH_00299	1.01e-149	deoC	4.1.2.4	-	F	ko:K01619	ko00030,map00030	ko00000,ko00001,ko01000	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
BNEFENCH_00300	3.24e-293	deoB	5.4.2.7	-	G	ko:K01839	ko00030,ko00230,map00030,map00230	ko00000,ko00001,ko01000	Phosphotransfer between the C1 and C5 carbon atoms of pentose
BNEFENCH_00301	3.14e-166	deoD	2.4.2.1	-	F	ko:K03784	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	Purine nucleoside phosphorylase
BNEFENCH_00302	4.51e-200	p75	-	-	M	ko:K21471	-	ko00000,ko01000,ko01002,ko01011	NlpC P60 family protein
BNEFENCH_00305	0.0	nox	1.6.3.4	-	C	ko:K17869	-	ko00000,ko01000	NADH oxidase
BNEFENCH_00306	7.14e-194	-	-	-	-	-	-	-	-
BNEFENCH_00307	2.79e-154	-	-	-	-	-	-	-	-
BNEFENCH_00308	0.0	uvrB3	3.1.12.1	-	KL	ko:K07464	-	ko00000,ko01000,ko02048	DEAD_2
BNEFENCH_00309	5.79e-306	-	-	-	G	ko:K02027	-	ko00000,ko00002,ko02000	Bacterial extracellular solute-binding protein
BNEFENCH_00310	9.04e-110	-	-	-	-	-	-	-	-
BNEFENCH_00311	0.0	strH	3.2.1.52	GH20	G	ko:K12373	ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142	ko00000,ko00001,ko00002,ko01000,ko03110	Gram-positive signal peptide protein, YSIRK family
BNEFENCH_00312	9.12e-249	manA	5.3.1.8	-	G	ko:K01809	ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	mannose-6-phosphate isomerase
BNEFENCH_00313	5.43e-167	-	-	-	K	ko:K03710	-	ko00000,ko03000	UTRA
BNEFENCH_00314	9.86e-282	agaS	-	-	G	ko:K02082	-	ko00000,ko01000	SIS domain
BNEFENCH_00315	1.3e-287	nagA	3.5.1.25	-	G	ko:K01443	ko00520,ko01130,map00520,map01130	ko00000,ko00001,ko01000	Belongs to the metallo-dependent hydrolases superfamily. NagA family
BNEFENCH_00316	0.0	bgaC	3.2.1.23	-	G	ko:K12308	ko00052,map00052	ko00000,ko00001,ko01000	Glycosyl hydrolases family 35
BNEFENCH_00317	5.61e-108	-	2.7.1.191	-	G	ko:K02794	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system sorbose subfamily IIB component
BNEFENCH_00318	4.68e-206	-	-	-	G	ko:K02795	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	PTS system sorbose-specific iic component
BNEFENCH_00319	3.66e-187	-	-	-	G	ko:K02796	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	PTS system mannose/fructose/sorbose family IID component
BNEFENCH_00320	2.72e-85	-	2.7.1.191	-	G	ko:K02793	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system fructose IIA component
BNEFENCH_00321	2.65e-287	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2325)
BNEFENCH_00322	4.54e-244	patB	4.4.1.8	-	E	ko:K14155	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko01000,ko01007	Aminotransferase, class I
BNEFENCH_00323	9.63e-246	-	3.4.11.9	-	E	ko:K01262	-	ko00000,ko01000,ko01002	Creatinase/Prolidase N-terminal domain
BNEFENCH_00324	0.0	-	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
BNEFENCH_00325	2.44e-77	-	2.7.1.196, 2.7.1.205	-	G	ko:K02760	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
BNEFENCH_00326	1.18e-67	-	2.7.1.196, 2.7.1.205	-	G	ko:K02759	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIA subunit
BNEFENCH_00327	1.21e-241	-	-	-	E	-	-	-	M42 glutamyl aminopeptidase
BNEFENCH_00328	0.0	-	-	-	GKT	ko:K03491	-	ko00000,ko03000	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
BNEFENCH_00329	9.99e-309	pepT	3.4.11.4	-	E	ko:K01258	-	ko00000,ko01000,ko01002	Cleaves the N-terminal amino acid of tripeptides
BNEFENCH_00330	0.0	oppA	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
BNEFENCH_00331	3.82e-141	-	-	-	S	ko:K03824	-	ko00000,ko01000	Acetyltransferase (GNAT) family
BNEFENCH_00333	4.57e-123	-	-	-	S	ko:K16925	-	ko00000,ko00002,ko02000	ABC-type cobalt transport system, permease component
BNEFENCH_00334	3.99e-313	-	-	-	P	ko:K16786,ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter
BNEFENCH_00335	2.8e-144	ykoC	-	-	P	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	cobalt transport
BNEFENCH_00336	1.19e-166	tenA	3.5.99.2	-	K	ko:K03707	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000,ko03000	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
BNEFENCH_00337	5.11e-107	thiW	-	-	S	-	-	-	Thiamine-precursor transporter protein (ThiW)
BNEFENCH_00338	3.39e-191	thiM	2.7.1.50	-	H	ko:K00878	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
BNEFENCH_00339	4.09e-136	thiE	2.5.1.3	-	H	ko:K00788	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)
BNEFENCH_00340	3.14e-189	thiD	2.7.1.49, 2.7.4.7	-	H	ko:K00941	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Phosphomethylpyrimidine kinase
BNEFENCH_00341	0.0	-	-	-	E	-	-	-	Amino acid permease
BNEFENCH_00342	1.16e-45	-	-	-	-	-	-	-	-
BNEFENCH_00343	2.08e-240	rbsR	-	-	K	ko:K02529	-	ko00000,ko03000	Periplasmic binding proteins and sugar binding domain of LacI family
BNEFENCH_00344	3.66e-85	rbsD	5.4.99.62	-	G	ko:K06726	ko02010,map02010	ko00000,ko00001,ko01000	Catalyzes the interconversion of beta-pyran and beta- furan forms of D-ribose
BNEFENCH_00345	0.0	rbsA	3.6.3.17	-	G	ko:K10441	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter
BNEFENCH_00346	4.84e-198	rbsC	-	-	U	ko:K10440	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
BNEFENCH_00347	1.41e-214	rbsB	-	-	G	ko:K10439	ko02010,ko02030,map02010,map02030	ko00000,ko00001,ko00002,ko02000	Periplasmic binding protein domain
BNEFENCH_00348	1.34e-207	rbsK	2.7.1.15	-	H	ko:K00852	ko00030,map00030	ko00000,ko00001,ko01000	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BNEFENCH_00349	3.61e-55	-	-	-	D	ko:K19159	-	ko00000,ko02048	Antitoxin component of a toxin-antitoxin (TA) module
BNEFENCH_00350	0.0	pbpC	-	-	M	ko:K21467	-	ko00000,ko01011	NTF2-like N-terminal transpeptidase domain
BNEFENCH_00351	4.58e-305	-	-	-	EGP	-	-	-	Major Facilitator
BNEFENCH_00352	5.39e-96	-	-	-	K	-	-	-	helix_turn_helix multiple antibiotic resistance protein
BNEFENCH_00353	1.89e-133	-	-	-	-	-	-	-	-
BNEFENCH_00354	4.22e-41	-	-	-	-	-	-	-	-
BNEFENCH_00355	3.9e-83	-	-	-	-	-	-	-	-
BNEFENCH_00356	2.01e-80	-	-	-	-	-	-	-	-
BNEFENCH_00357	0.0	frdC	1.3.5.1, 1.3.5.4	-	C	ko:K00239,ko:K00244	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,ko05134,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020,map05134	ko00000,ko00001,ko00002,ko01000	HI0933-like protein
BNEFENCH_00358	1.9e-249	-	-	-	GKT	-	-	-	transcriptional antiterminator
BNEFENCH_00359	3.38e-66	-	2.7.1.194	-	G	ko:K02822	ko00053,ko01100,ko01120,ko02060,map00053,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
BNEFENCH_00360	5.62e-292	-	-	-	S	ko:K03475	ko00053,ko01100,ko01120,ko02060,map00053,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko02000	PTS system sugar-specific permease component
BNEFENCH_00361	1.19e-88	-	-	-	-	-	-	-	-
BNEFENCH_00362	6.47e-208	-	4.1.2.13	-	G	ko:K01624	ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Fructose-bisphosphate aldolase class-II
BNEFENCH_00363	7.78e-150	-	-	-	S	-	-	-	Zeta toxin
BNEFENCH_00364	3.2e-203	-	-	-	K	-	-	-	Sugar-specific transcriptional regulator TrmB
BNEFENCH_00365	1.12e-189	-	-	-	S	-	-	-	Sulfite exporter TauE/SafE
BNEFENCH_00366	2.9e-229	-	4.3.1.12	-	E	ko:K01750	ko00330,ko01110,ko01130,ko01230,map00330,map01110,map01130,map01230	ko00000,ko00001,ko01000	Ornithine cyclodeaminase/mu-crystallin family
BNEFENCH_00367	1.11e-190	-	3.1.1.24	-	S	ko:K01055	ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220	ko00000,ko00001,ko00002,ko01000	Alpha/beta hydrolase family
BNEFENCH_00370	4.73e-303	-	-	-	C	-	-	-	FAD dependent oxidoreductase
BNEFENCH_00371	3.54e-120	-	-	-	K	-	-	-	Transcriptional regulator, LysR family
BNEFENCH_00372	2.16e-203	XK27_10120	-	-	K	-	-	-	S-adenosyl-l-methionine hydroxide adenosyltransferase
BNEFENCH_00373	1.05e-127	-	-	-	S	ko:K16924	-	ko00000,ko00002,ko02000	UPF0397 protein
BNEFENCH_00374	0.0	ykoD	-	-	P	ko:K16786,ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
BNEFENCH_00375	2.69e-190	cbiQ	-	-	P	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	cobalt transport
BNEFENCH_00376	2.39e-28	-	-	-	K	-	-	-	helix_turn_helix, arabinose operon control protein
BNEFENCH_00377	4.51e-57	-	-	-	-	-	-	-	-
BNEFENCH_00378	0.0	-	-	-	K	-	-	-	Sigma-54 interaction domain
BNEFENCH_00379	4.78e-95	-	-	-	G	ko:K02744	ko00052,ko02060,map00052,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system fructose IIA component
BNEFENCH_00380	2.66e-117	-	2.7.1.191	-	G	ko:K02794	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system sorbose subfamily IIB component
BNEFENCH_00381	4.54e-195	levC	-	-	M	ko:K02795	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	PTS system sorbose-specific iic component
BNEFENCH_00382	2.15e-199	levD	-	-	G	ko:K02771	ko00051,ko02060,map00051,map02060	ko00000,ko00001,ko00002,ko02000	PTS system mannose/fructose/sorbose family IID component
BNEFENCH_00383	9.35e-74	-	-	-	-	-	-	-	-
BNEFENCH_00384	0.0	-	3.2.1.65	GH32	G	ko:K01212	ko00500,map00500	ko00000,ko00001,ko01000	Glycosyl hydrolases family 32
BNEFENCH_00386	1.83e-156	-	-	-	S	-	-	-	Haloacid dehalogenase-like hydrolase
BNEFENCH_00387	2.38e-173	-	-	-	K	ko:K03436	-	ko00000,ko03000	DeoR C terminal sensor domain
BNEFENCH_00388	1.14e-143	-	4.1.2.43	-	G	ko:K08093	ko00030,ko00680,ko01100,ko01120,ko01200,ko01230,map00030,map00680,map01100,map01120,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Orotidine 5'-phosphate decarboxylase / HUMPS family
BNEFENCH_00389	7.85e-124	-	5.3.1.27	-	M	ko:K08094	ko00030,ko00680,ko01100,ko01120,ko01200,ko01230,map00030,map00680,map01100,map01120,map01200,map01230	ko00000,ko00001,ko00002,ko01000	SIS domain
BNEFENCH_00390	0.0	-	2.7.1.197	-	G	ko:K02798,ko:K02799,ko:K02800	ko00051,ko02060,map00051,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
BNEFENCH_00391	4.34e-281	mtlD	1.1.1.17	-	C	ko:K00009	ko00051,map00051	ko00000,ko00001,ko01000	mannitol-1-phosphate 5-dehydrogenase activity
BNEFENCH_00392	4.5e-239	-	1.5.1.28	-	C	ko:K04940	-	ko00000,ko01000	NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain
BNEFENCH_00393	1.8e-166	yxeO	-	-	E	ko:K16960,ko:K16963	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter
BNEFENCH_00394	2.56e-73	-	-	-	ET	ko:K16957	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial periplasmic substrate-binding proteins
BNEFENCH_00395	3.8e-114	-	-	-	ET	ko:K16957	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial periplasmic substrate-binding proteins
BNEFENCH_00396	6.06e-147	ytmL	-	-	P	ko:K16958,ko:K16959	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
BNEFENCH_00397	4.25e-150	-	-	-	P	ko:K16958	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
BNEFENCH_00398	1.31e-303	proP	-	-	EGP	ko:K03761,ko:K03762	-	ko00000,ko02000	Sugar (and other) transporter
BNEFENCH_00400	1.33e-17	-	-	-	S	-	-	-	YvrJ protein family
BNEFENCH_00401	1.3e-181	-	-	-	M	-	-	-	hydrolase, family 25
BNEFENCH_00402	1.26e-112	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
BNEFENCH_00403	3.29e-237	yxeA	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter permease
BNEFENCH_00404	5.82e-153	lolD	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
BNEFENCH_00405	0.0	npr	1.11.1.1	-	C	ko:K05910	-	ko00000,ko01000	NADH oxidase
BNEFENCH_00406	7.51e-194	-	-	-	S	-	-	-	hydrolase
BNEFENCH_00407	1.49e-58	-	-	-	S	ko:K19157	-	ko00000,ko01000,ko02048	Bacterial toxin of type II toxin-antitoxin system, YafQ
BNEFENCH_00408	1.15e-237	-	-	-	K	ko:K02529	-	ko00000,ko03000	Periplasmic binding proteins and sugar binding domain of LacI family
BNEFENCH_00409	8.56e-109	-	2.7.1.191	-	G	ko:K02794	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system sorbose subfamily IIB component
BNEFENCH_00410	2.18e-177	-	-	-	G	ko:K02795	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	PTS system sorbose-specific iic component
BNEFENCH_00411	7.9e-196	-	-	-	G	ko:K02796	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	PTS system mannose/fructose/sorbose family IID component
BNEFENCH_00412	0.0	-	-	-	G	-	-	-	Belongs to the glycosyl hydrolase 31 family
BNEFENCH_00413	8.75e-90	-	2.7.1.191	-	G	ko:K02793	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system fructose IIA component
BNEFENCH_00414	0.0	malL	3.2.1.10	GH13	G	ko:K01182	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Alpha amylase, catalytic domain protein
BNEFENCH_00415	0.0	-	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter
BNEFENCH_00416	0.0	-	-	-	V	ko:K06147,ko:K06148	-	ko00000,ko02000	ABC transporter transmembrane region
BNEFENCH_00418	0.0	pip	-	-	V	ko:K01421	-	ko00000	domain protein
BNEFENCH_00419	6.39e-200	metQ1	-	-	P	ko:K02073	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the nlpA lipoprotein family
BNEFENCH_00420	5.84e-253	-	3.5.1.24	-	M	ko:K01442	ko00120,ko00121,ko01100,map00120,map00121,map01100	ko00000,ko00001,ko01000	Linear amide C-N hydrolases, choloylglycine hydrolase family
BNEFENCH_00421	1.75e-105	-	-	-	-	-	-	-	-
BNEFENCH_00422	0.0	l1n	4.2.1.53	-	S	ko:K10254	-	ko00000,ko01000	Myosin-crossreactive antigen
BNEFENCH_00423	7.24e-23	-	-	-	-	-	-	-	-
BNEFENCH_00424	2.03e-130	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
BNEFENCH_00425	2.1e-78	dhaM	2.7.1.121	-	S	ko:K05881	ko00561,map00561	ko00000,ko00001,ko01000,ko02000	PTS system fructose IIA component
BNEFENCH_00426	2.35e-132	dhaL	2.7.1.121	-	S	ko:K05879	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Dak2
BNEFENCH_00427	1.03e-242	dhaK	2.7.1.121	-	G	ko:K05878	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Dak1 domain
BNEFENCH_00428	1.44e-99	-	-	-	O	-	-	-	OsmC-like protein
BNEFENCH_00431	0.0	-	-	-	L	-	-	-	Exonuclease
BNEFENCH_00432	5.14e-65	yczG	-	-	K	-	-	-	Helix-turn-helix domain
BNEFENCH_00433	3.52e-256	yceJ	-	-	EGP	ko:K08221	-	ko00000,ko02000	transporter
BNEFENCH_00434	9.08e-135	ydfF	-	-	K	-	-	-	Transcriptional
BNEFENCH_00435	2.19e-136	tag	3.2.2.20	-	L	ko:K01246	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	glycosylase
BNEFENCH_00436	5.36e-215	fba	4.1.2.13, 4.1.2.29	-	G	ko:K01624,ko:K03339	ko00010,ko00030,ko00051,ko00562,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00562,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Fructose-1,6-bisphosphate aldolase, class II
BNEFENCH_00437	0.0	cidC	1.2.3.3	-	EH	ko:K00158	ko00620,ko01100,map00620,map01100	ko00000,ko00001,ko01000	Belongs to the TPP enzyme family
BNEFENCH_00438	5.8e-248	pbpE	-	-	V	-	-	-	Beta-lactamase
BNEFENCH_00439	3.81e-191	ykfB	5.1.1.20	-	M	ko:K19802	-	ko00000,ko01000	Belongs to the mandelate racemase muconate lactonizing enzyme family
BNEFENCH_00440	3.17e-185	-	-	-	H	-	-	-	Protein of unknown function (DUF1698)
BNEFENCH_00441	3.29e-183	puuD	-	-	S	ko:K07010	-	ko00000,ko01002	peptidase C26
BNEFENCH_00442	0.0	-	6.3.1.2	-	E	ko:K01915	ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727	ko00000,ko00001,ko01000,ko04147	Glutamine synthetase, catalytic domain
BNEFENCH_00443	3.28e-280	-	-	-	S	ko:K07045	-	ko00000	Amidohydrolase
BNEFENCH_00444	0.0	-	-	-	E	-	-	-	Amino acid permease
BNEFENCH_00445	9.74e-98	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
BNEFENCH_00446	1.36e-206	-	-	-	S	-	-	-	reductase
BNEFENCH_00447	1.68e-253	adh3	-	-	C	-	-	-	Zinc-binding dehydrogenase
BNEFENCH_00448	1.85e-75	ydeP	-	-	K	-	-	-	Transcriptional regulator, HxlR family
BNEFENCH_00449	1.38e-123	-	-	-	-	-	-	-	-
BNEFENCH_00450	0.0	-	3.2.1.21, 3.2.1.85, 3.2.1.86	GT1	G	ko:K01220,ko:K01223,ko:K05350	ko00010,ko00052,ko00460,ko00500,ko00940,ko01100,ko01110,map00010,map00052,map00460,map00500,map00940,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
BNEFENCH_00451	1.54e-75	-	2.7.1.196, 2.7.1.205	-	G	ko:K02759	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIA subunit
BNEFENCH_00452	5.16e-289	-	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
BNEFENCH_00453	4.8e-66	licB2	2.7.1.196, 2.7.1.205	-	G	ko:K02760	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
BNEFENCH_00454	0.0	-	-	-	GKT	ko:K03491	-	ko00000,ko03000	Mga helix-turn-helix domain
BNEFENCH_00455	3.38e-78	tnpR1	-	-	L	-	-	-	Resolvase, N terminal domain
BNEFENCH_00456	5.05e-26	tnpR1	-	-	L	-	-	-	Resolvase, N terminal domain
BNEFENCH_00457	2.29e-45	-	3.4.22.70	-	M	ko:K07284	-	ko00000,ko01000,ko01002,ko01011	Sortase family
BNEFENCH_00458	4.78e-164	XK27_12140	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
BNEFENCH_00459	0.0	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
BNEFENCH_00460	7.73e-164	-	-	-	K	ko:K20488	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko02022	Transcriptional regulatory protein, C terminal
BNEFENCH_00461	3.45e-251	-	2.7.13.3	-	T	ko:K20487	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BNEFENCH_00462	8.89e-177	-	-	-	V	-	-	-	ATPases associated with a variety of cellular activities
BNEFENCH_00463	6.25e-268	-	-	-	-	ko:K01992	-	ko00000,ko00002,ko02000	-
BNEFENCH_00464	6.88e-119	-	-	-	-	-	-	-	-
BNEFENCH_00465	0.0	prtP	3.4.21.96	-	O	ko:K01361	-	ko00000,ko01000,ko01002,ko03110	Belongs to the peptidase S8 family
BNEFENCH_00466	0.0	prtP	3.4.21.96	-	O	ko:K01361	-	ko00000,ko01000,ko01002,ko03110	Belongs to the peptidase S8 family
BNEFENCH_00467	0.0	pepN	3.4.11.2	-	E	ko:K01256	ko00480,ko01100,map00480,map01100	ko00000,ko00001,ko01000,ko01002	aminopeptidase
BNEFENCH_00468	0.0	ycaM	-	-	E	-	-	-	amino acid
BNEFENCH_00469	1.66e-117	-	-	-	S	ko:K08996	-	ko00000	Protein of unknown function (DUF1440)
BNEFENCH_00470	4.74e-211	-	-	-	K	-	-	-	Transcriptional regulator, LysR family
BNEFENCH_00471	4.66e-206	-	-	-	G	-	-	-	Xylose isomerase-like TIM barrel
BNEFENCH_00472	3.6e-180	-	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Enoyl-(Acyl carrier protein) reductase
BNEFENCH_00473	1.31e-208	aroE	1.1.1.25	-	E	ko:K00014	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
BNEFENCH_00474	2.58e-274	-	-	-	EGP	-	-	-	Major Facilitator Superfamily
BNEFENCH_00475	4.06e-213	aroE	1.1.1.25	-	E	ko:K00014	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
BNEFENCH_00476	2.74e-206	metA	2.3.1.46	-	E	ko:K00651	ko00270,ko00920,ko01100,ko01110,ko01230,map00270,map00920,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Transfers an acetyl group from acetyl-CoA to
BNEFENCH_00477	1.27e-221	cysK	2.5.1.47	-	E	ko:K01738	ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the cysteine synthase cystathionine beta- synthase family
BNEFENCH_00478	2.14e-24	-	-	-	-	-	-	-	-
BNEFENCH_00480	5.52e-286	int3	-	-	L	-	-	-	Belongs to the 'phage' integrase family
BNEFENCH_00484	1.4e-172	-	-	-	-	-	-	-	-
BNEFENCH_00486	1.51e-80	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
BNEFENCH_00489	2.33e-201	ps305	-	-	S	-	-	-	Protein of unknown function (Hypoth_ymh)
BNEFENCH_00490	2.23e-179	-	-	-	S	-	-	-	ORF6N domain
BNEFENCH_00492	3.94e-58	-	-	-	S	-	-	-	Domain of unknown function (DUF1883)
BNEFENCH_00498	7.76e-181	-	-	-	L	-	-	-	Helix-turn-helix domain
BNEFENCH_00499	1.27e-20	pi346	-	-	L	ko:K02315	-	ko00000,ko03032	IstB-like ATP binding protein
BNEFENCH_00500	4.1e-161	pi346	-	-	L	ko:K02315	-	ko00000,ko03032	IstB-like ATP binding protein
BNEFENCH_00502	5.45e-94	-	-	-	-	-	-	-	-
BNEFENCH_00503	1.23e-171	-	-	-	-	-	-	-	-
BNEFENCH_00506	2.76e-104	-	-	-	-	-	-	-	-
BNEFENCH_00508	0.000324	-	-	-	S	-	-	-	CsbD-like
BNEFENCH_00509	8.18e-206	-	-	-	-	-	-	-	-
BNEFENCH_00510	3.44e-64	-	-	-	-	-	-	-	-
BNEFENCH_00511	8.29e-74	-	-	-	-	-	-	-	-
BNEFENCH_00513	8.71e-59	-	-	-	L	ko:K07483	-	ko00000	4.5 Transposon and IS
BNEFENCH_00514	8.49e-198	-	-	-	L	ko:K07497	-	ko00000	4.5 Transposon and IS
BNEFENCH_00516	2.03e-62	-	-	-	V	-	-	-	HNH nucleases
BNEFENCH_00517	8.11e-60	-	-	-	L	-	-	-	Single-strand binding protein family
BNEFENCH_00518	2.34e-122	-	-	-	-	-	-	-	-
BNEFENCH_00521	5.76e-27	-	-	-	-	-	-	-	-
BNEFENCH_00522	4.05e-93	-	-	-	-	-	-	-	-
BNEFENCH_00523	1.28e-96	-	-	-	L	-	-	-	COG3547 Transposase and inactivated derivatives
BNEFENCH_00525	1.75e-08	-	-	-	M	-	-	-	Collagen binding domain
BNEFENCH_00526	0.0	yvcC	-	-	M	-	-	-	Cna protein B-type domain
BNEFENCH_00527	7.65e-164	-	-	-	M	-	-	-	domain protein
BNEFENCH_00528	9.78e-92	-	-	-	M	-	-	-	LPXTG cell wall anchor motif
BNEFENCH_00529	6.61e-256	-	3.4.22.70	-	M	ko:K07284	-	ko00000,ko01000,ko01002,ko01011	Sortase family
BNEFENCH_00530	2.37e-91	-	-	-	S	ko:K07006	-	ko00000	Pyridoxamine 5'-phosphate oxidase
BNEFENCH_00531	5.11e-93	yqeB	-	-	S	-	-	-	Pyrimidine dimer DNA glycosylase
BNEFENCH_00532	2.22e-60	-	-	-	L	-	-	-	BRCA1 C Terminus (BRCT) domain
BNEFENCH_00533	3.83e-147	-	-	-	L	-	-	-	Resolvase, N terminal domain
BNEFENCH_00534	2.97e-185	-	-	-	S	ko:K07048	-	ko00000	Phosphotriesterase family
BNEFENCH_00535	2.29e-274	dgoD	4.2.1.6, 4.2.1.8	-	M	ko:K01684,ko:K08323	ko00040,ko00052,ko01100,ko01120,map00040,map00052,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Mandelate racemase muconate lactonizing enzyme
BNEFENCH_00536	5.67e-296	-	-	-	G	ko:K02775	ko00052,ko01100,ko02060,map00052,map01100,map02060	ko00000,ko00001,ko00002,ko02000	PTS system sugar-specific permease component
BNEFENCH_00537	7.8e-52	-	2.7.1.200	-	G	ko:K02774	ko00052,ko01100,ko02060,map00052,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BNEFENCH_00538	1.43e-89	-	2.7.1.200, 2.7.1.202	-	G	ko:K02768,ko:K02769,ko:K02770,ko:K02773	ko00051,ko00052,ko01100,ko01120,ko02060,map00051,map00052,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphoenolpyruvate-dependent sugar phosphotransferase system
BNEFENCH_00539	2.14e-119	kdgA	4.1.2.14, 4.1.3.42	-	G	ko:K01625	ko00030,ko00630,ko01100,ko01120,ko01200,map00030,map00630,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	KDPG and KHG aldolase
BNEFENCH_00540	0.0	-	-	-	G	-	-	-	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
BNEFENCH_00541	1.93e-210	-	4.1.2.13	-	G	ko:K01624	ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Fructose-bisphosphate aldolase class-II
BNEFENCH_00542	8.81e-146	-	4.1.2.13	-	G	ko:K01624	ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Fructose-bisphosphate aldolase class-II
BNEFENCH_00543	1.82e-214	-	-	-	G	ko:K02770	ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko02000	Phosphotransferase System
BNEFENCH_00544	2.61e-58	-	2.7.1.202	-	G	ko:K02769	ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
BNEFENCH_00545	7.45e-82	-	2.7.1.202	-	GT	ko:K02768	ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
BNEFENCH_00546	3.65e-152	-	-	-	K	ko:K02530	-	ko00000,ko03000	DeoR C terminal sensor domain
BNEFENCH_00547	2.34e-168	scrK	2.7.1.4	-	GK	ko:K00847	ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100	ko00000,ko00001,ko01000	ROK family
BNEFENCH_00548	1.56e-53	polYB	2.7.7.7	-	L	ko:K02346,ko:K03502	-	ko00000,ko01000,ko03400	Belongs to the DNA polymerase type-Y family
BNEFENCH_00549	5.06e-68	polYB	2.7.7.7	-	L	ko:K02346,ko:K03502	-	ko00000,ko01000,ko03400	Belongs to the DNA polymerase type-Y family
BNEFENCH_00551	2.82e-26	-	-	-	S	-	-	-	Family of unknown function (DUF5388)
BNEFENCH_00552	3.31e-137	soj	-	-	D	-	-	-	CobQ CobB MinD ParA nucleotide binding domain protein
BNEFENCH_00553	4.74e-98	-	-	-	S	-	-	-	Replication initiator protein A (RepA) N-terminus
BNEFENCH_00566	6.78e-42	-	-	-	-	-	-	-	-
BNEFENCH_00567	3.52e-260	-	-	-	-	-	-	-	-
BNEFENCH_00568	3.5e-296	-	-	-	M	-	-	-	Domain of unknown function (DUF5011)
BNEFENCH_00571	0.0	-	-	-	U	ko:K03205	ko03070,map03070	ko00000,ko00001,ko00002,ko02044	TraM recognition site of TraD and TraG
BNEFENCH_00572	0.0	-	-	-	S	-	-	-	domain, Protein
BNEFENCH_00574	1.77e-137	-	-	-	-	-	-	-	-
BNEFENCH_00575	0.0	-	-	-	S	-	-	-	COG0433 Predicted ATPase
BNEFENCH_00576	2.45e-244	-	-	-	M	ko:K21471,ko:K21472	-	ko00000,ko01000,ko01002,ko01011	cysteine-type peptidase activity
BNEFENCH_00583	1.17e-286	-	-	-	S	-	-	-	COG0790 FOG TPR repeat, SEL1 subfamily
BNEFENCH_00585	0.0	-	-	-	L	-	-	-	Protein of unknown function (DUF3991)
BNEFENCH_00586	1.67e-45	-	-	-	L	-	-	-	Transposase, IS116 IS110 IS902 family
BNEFENCH_00587	0.0	-	1.8.1.7	-	C	ko:K00383,ko:K21739	ko00480,ko04918,map00480,map04918	ko00000,ko00001,ko01000	Pyridine nucleotide-disulfide oxidoreductase
BNEFENCH_00588	1.28e-74	-	-	-	T	-	-	-	Calcineurin-like phosphoesterase superfamily domain
BNEFENCH_00589	2.45e-245	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
BNEFENCH_00590	2.94e-199	-	-	-	L	ko:K07497	-	ko00000	4.5 Transposon and IS
BNEFENCH_00591	8.06e-232	-	-	-	M	-	-	-	Glycosyl hydrolases family 25
BNEFENCH_00592	1.8e-272	mccB	4.4.1.1, 4.4.1.2, 4.4.1.8	-	E	ko:K01760,ko:K17217	ko00260,ko00270,ko00450,ko00920,ko01100,ko01110,ko01130,ko01230,map00260,map00270,map00450,map00920,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	cystathionine
BNEFENCH_00593	6.84e-186	tcyA	-	-	ET	ko:K02424	ko02010,map02010	ko00000,ko00001,ko00002,ko02000,ko02035	Belongs to the bacterial solute-binding protein 3 family
BNEFENCH_00594	2.87e-157	tcyB	-	-	E	ko:K10009	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
BNEFENCH_00595	8.16e-43	-	-	-	-	-	-	-	-
BNEFENCH_00596	0.0	brnQ	-	-	U	ko:K03311	-	ko00000	Component of the transport system for branched-chain amino acids
BNEFENCH_00597	1.14e-151	-	-	-	S	-	-	-	WxL domain surface cell wall-binding
BNEFENCH_00598	6.03e-198	-	-	-	S	-	-	-	Cell surface protein
BNEFENCH_00599	5.11e-58	-	-	-	-	-	-	-	-
BNEFENCH_00600	1.33e-249	-	-	-	S	-	-	-	Leucine-rich repeat (LRR) protein
BNEFENCH_00601	2.64e-151	-	-	-	S	-	-	-	WxL domain surface cell wall-binding
BNEFENCH_00602	2.68e-75	-	-	-	-	-	-	-	-
BNEFENCH_00603	2.02e-137	-	-	-	N	-	-	-	WxL domain surface cell wall-binding
BNEFENCH_00604	0.0	-	-	-	S	-	-	-	Leucine-rich repeat (LRR) protein
BNEFENCH_00605	6.94e-225	yicL	-	-	EG	-	-	-	EamA-like transporter family
BNEFENCH_00606	0.0	-	-	-	-	-	-	-	-
BNEFENCH_00607	3.03e-186	CcmA5	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter
BNEFENCH_00608	3.7e-71	-	-	-	S	-	-	-	ECF-type riboflavin transporter, S component
BNEFENCH_00609	5.45e-31	-	-	-	S	-	-	-	ECF-type riboflavin transporter, S component
BNEFENCH_00610	1.83e-192	pdxK	2.7.1.35	-	H	ko:K00868	ko00750,ko01100,map00750,map01100	ko00000,ko00001,ko01000	Phosphomethylpyrimidine kinase
BNEFENCH_00611	1.86e-209	metF	1.5.1.20	-	C	ko:K00297	ko00670,ko00720,ko01100,ko01120,ko01200,ko01523,map00670,map00720,map01100,map01120,map01200,map01523	ko00000,ko00001,ko00002,ko01000	Methylenetetrahydrofolate reductase
BNEFENCH_00612	0.0	metE	2.1.1.14	-	E	ko:K00549	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
BNEFENCH_00613	0.0	XK27_09600	-	-	V	ko:K06147,ko:K18891	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter, ATP-binding protein
BNEFENCH_00614	0.0	-	-	-	V	ko:K06147,ko:K18892	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
BNEFENCH_00615	3.34e-286	oxlT	-	-	P	ko:K08177	-	ko00000,ko02000	Major Facilitator Superfamily
BNEFENCH_00616	5.43e-167	treR	-	-	K	ko:K03486	-	ko00000,ko03000	UTRA
BNEFENCH_00617	0.0	treC	3.2.1.93	GH13	G	ko:K01226	ko00500,map00500	ko00000,ko00001,ko01000	Alpha amylase, catalytic domain protein
BNEFENCH_00618	0.0	treB	-	-	G	ko:K02755,ko:K02756,ko:K02757	ko02060,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
BNEFENCH_00619	1.51e-283	sstT	-	-	U	ko:K07862	-	ko00000,ko02000	Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
BNEFENCH_00620	0.0	-	-	-	E	ko:K03294	-	ko00000	Amino Acid
BNEFENCH_00621	1.13e-221	ldh	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	lactate/malate dehydrogenase, alpha/beta C-terminal domain
BNEFENCH_00622	9.32e-317	gdhA	1.4.1.4	-	E	ko:K00262	ko00220,ko00250,ko00910,ko01100,map00220,map00250,map00910,map01100	ko00000,ko00001,ko01000	Belongs to the Glu Leu Phe Val dehydrogenases family
BNEFENCH_00623	3.08e-43	cspA	-	-	K	ko:K03704	-	ko00000,ko03000	'Cold-shock' DNA-binding domain
BNEFENCH_00624	2.1e-89	-	-	-	-	-	-	-	-
BNEFENCH_00625	1.37e-99	-	-	-	O	-	-	-	OsmC-like protein
BNEFENCH_00626	0.0	yjcA	-	-	S	ko:K19350	ko02010,map02010	ko00000,ko00001,ko01504,ko02000	ABC transporter
BNEFENCH_00627	2.73e-147	ylbE	-	-	GM	-	-	-	NAD(P)H-binding
BNEFENCH_00628	9.12e-201	-	-	-	S	-	-	-	Aldo/keto reductase family
BNEFENCH_00629	9.04e-317	yifK	-	-	E	ko:K03293	-	ko00000	Amino acid permease
BNEFENCH_00630	0.0	-	-	-	S	-	-	-	Protein of unknown function (DUF3800)
BNEFENCH_00631	9.95e-167	nhaK	-	-	P	ko:K03316	-	ko00000	Sodium proton antiporter
BNEFENCH_00632	9.35e-230	nhaK	-	-	P	ko:K03316	-	ko00000	Sodium proton antiporter
BNEFENCH_00633	5.49e-78	-	-	-	S	-	-	-	Protein of unknown function (DUF3021)
BNEFENCH_00634	1.2e-95	-	-	-	K	-	-	-	LytTr DNA-binding domain
BNEFENCH_00635	5.16e-190	-	-	-	V	ko:K11051	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC-2 type transporter
BNEFENCH_00636	4.54e-209	-	-	-	V	ko:K01990,ko:K11050	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
BNEFENCH_00637	2.92e-186	-	-	-	S	-	-	-	Alpha/beta hydrolase of unknown function (DUF915)
BNEFENCH_00638	2.71e-159	cah	4.2.1.1	-	P	ko:K01674	ko00910,map00910	ko00000,ko00001,ko01000	Eukaryotic-type carbonic anhydrase
BNEFENCH_00639	1.06e-69	ybjQ	-	-	S	-	-	-	Belongs to the UPF0145 family
BNEFENCH_00640	2.92e-203	-	-	-	C	-	-	-	nadph quinone reductase
BNEFENCH_00641	2.09e-315	amt	-	-	P	ko:K03320	-	ko00000,ko02000	ammonium transporter
BNEFENCH_00642	9.75e-228	ywbN	-	-	P	ko:K07223,ko:K16301	-	ko00000,ko01000,ko02000	Peroxidase
BNEFENCH_00643	6.35e-154	yqgG	-	-	S	ko:K07507	-	ko00000,ko02000	MgtC family
BNEFENCH_00644	6.52e-153	endA	-	-	F	ko:K15051	-	ko00000	DNA RNA non-specific endonuclease
BNEFENCH_00645	5.67e-21	-	-	-	M	-	-	-	Peptidoglycan-binding domain 1 protein
BNEFENCH_00647	0.0	ykpA	-	-	S	-	-	-	ABC transporter, ATP-binding protein
BNEFENCH_00648	0.0	-	-	-	L	-	-	-	ATPase domain of DNA mismatch repair MUTS family
BNEFENCH_00649	1.48e-144	ung2	-	-	L	-	-	-	Uracil-DNA glycosylase
BNEFENCH_00650	7.75e-170	glpF	-	-	U	ko:K02440	-	ko00000,ko02000	Belongs to the MIP aquaporin (TC 1.A.8) family
BNEFENCH_00651	0.0	glpD	1.1.3.21, 1.1.5.3	-	C	ko:K00105,ko:K00111	ko00564,ko01110,map00564,map01110	ko00000,ko00001,ko01000	C-terminal domain of alpha-glycerophosphate oxidase
BNEFENCH_00652	0.0	glpK	2.7.1.30	-	F	ko:K00864	ko00561,ko01100,ko03320,ko04626,map00561,map01100,map03320,map04626	ko00000,ko00001,ko01000,ko04147	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
BNEFENCH_00653	4.62e-91	-	-	-	M	-	-	-	Glycosyltransferase like family 2
BNEFENCH_00654	1.37e-64	-	-	-	M	-	-	-	Glycosyltransferase like family 2
BNEFENCH_00655	3.82e-65	-	-	-	M	-	-	-	Glycosyltransferase like family 2
BNEFENCH_00656	7.26e-208	lacT	-	-	K	ko:K02531	-	ko00000,ko03000	PRD domain
BNEFENCH_00657	0.0	lacE	2.7.1.207	-	G	ko:K02787,ko:K02788	ko00052,ko01100,ko02060,map00052,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphotransferase system, EIIC
BNEFENCH_00658	0.0	lacG	3.2.1.21, 3.2.1.85, 3.2.1.86	GT1	G	ko:K01220,ko:K01223,ko:K05350	ko00010,ko00052,ko00460,ko00500,ko00940,ko01100,ko01110,map00010,map00052,map00460,map00500,map00940,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
BNEFENCH_00659	2.65e-67	lacF	2.7.1.196, 2.7.1.205, 2.7.1.207	-	G	ko:K02759,ko:K02786	ko00052,ko00500,ko01100,ko02060,map00052,map00500,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIA subunit
BNEFENCH_00660	6.67e-282	galK	2.7.1.6	-	F	ko:K00849	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
BNEFENCH_00661	1.73e-246	galE	5.1.3.2	-	M	ko:K01784	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the NAD(P)-dependent epimerase dehydratase family
BNEFENCH_00662	0.0	galT	2.7.7.12	-	G	ko:K00965	ko00052,ko00520,ko01100,ko04917,map00052,map00520,map01100,map04917	ko00000,ko00001,ko00002,ko01000	UDP-glucose--hexose-1-phosphate uridylyltransferase
BNEFENCH_00663	1.39e-217	msmR	-	-	K	ko:K02529	-	ko00000,ko03000	Transcriptional regulator
BNEFENCH_00664	3.94e-250	galM	5.1.3.3	-	G	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the interconversion of alpha and beta anomers of maltose
BNEFENCH_00667	2.76e-110	-	2.7.1.204	-	G	ko:K20112	ko02060,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
BNEFENCH_00668	2.68e-67	-	2.7.1.204	-	G	ko:K20113	ko02060,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
BNEFENCH_00669	0.0	gatC	-	-	G	ko:K20114	ko02060,map02060	ko00000,ko00001,ko00002,ko02000	PTS system sugar-specific permease component
BNEFENCH_00670	9.83e-37	-	-	-	-	-	-	-	-
BNEFENCH_00671	4.48e-160	-	-	-	S	-	-	-	Domain of unknown function (DUF4867)
BNEFENCH_00672	7.11e-225	lacC	2.7.1.144	-	H	ko:K00917	ko00052,ko01100,map00052,map01100	ko00000,ko00001,ko01000	pfkB family carbohydrate kinase
BNEFENCH_00673	1.03e-239	lacD	4.1.2.40	-	G	ko:K01635	ko00052,ko01100,ko02024,map00052,map01100,map02024	ko00000,ko00001,ko01000	Belongs to the aldolase LacD family
BNEFENCH_00674	1.3e-121	lacB	5.3.1.26	-	G	ko:K01819	ko00052,ko01100,map00052,map01100	ko00000,ko00001,ko01000	Ribose/Galactose Isomerase
BNEFENCH_00675	1.25e-96	lacA	5.3.1.26	-	G	ko:K01819	ko00052,ko01100,map00052,map01100	ko00000,ko00001,ko01000	Ribose/Galactose Isomerase
BNEFENCH_00676	4.13e-181	-	-	-	K	ko:K02530	-	ko00000,ko03000	DeoR C terminal sensor domain
BNEFENCH_00677	3.73e-150	-	-	-	S	-	-	-	HAD hydrolase, family IA, variant
BNEFENCH_00678	1.08e-268	sbcD	-	-	L	ko:K03547	-	ko00000,ko03400	SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity
BNEFENCH_00679	0.0	sbcC	-	-	L	ko:K03546	-	ko00000,ko03400	Putative exonuclease SbcCD, C subunit
BNEFENCH_00680	6.8e-21	-	-	-	-	-	-	-	-
BNEFENCH_00681	7.42e-112	hsp1	-	-	O	ko:K13993	ko04141,map04141	ko00000,ko00001,ko03110	Belongs to the small heat shock protein (HSP20) family
BNEFENCH_00683	3.1e-270	mutY	-	-	L	ko:K03575	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	A G-specific adenine glycosylase
BNEFENCH_00684	2.23e-191	-	-	-	I	-	-	-	alpha/beta hydrolase fold
BNEFENCH_00685	1.5e-156	yrkL	-	-	S	-	-	-	Flavodoxin-like fold
BNEFENCH_00687	2.6e-113	-	-	-	S	-	-	-	Short repeat of unknown function (DUF308)
BNEFENCH_00688	1.92e-153	-	-	-	S	-	-	-	Psort location Cytoplasmic, score
BNEFENCH_00689	9.5e-199	thiD	2.7.1.49, 2.7.4.7	-	H	ko:K00941	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Phosphomethylpyrimidine kinase
BNEFENCH_00690	1.94e-251	-	-	-	-	-	-	-	-
BNEFENCH_00692	8.05e-149	-	-	-	S	ko:K07118	-	ko00000	NAD(P)H-binding
BNEFENCH_00693	0.0	bglB	3.2.1.21, 3.2.1.52	GH3	G	ko:K01207,ko:K05349	ko00460,ko00500,ko00520,ko00531,ko00940,ko01100,ko01110,ko01501,map00460,map00500,map00520,map00531,map00940,map01100,map01110,map01501	ko00000,ko00001,ko00002,ko01000	hydrolase, family 3
BNEFENCH_00694	3.73e-214	XK27_00670	-	-	S	ko:K01989,ko:K05832	-	ko00000,ko00002,ko02000	ABC transporter substrate binding protein
BNEFENCH_00695	2.07e-213	XK27_00670	-	-	S	ko:K01989,ko:K05832	-	ko00000,ko00002,ko02000	ABC transporter
BNEFENCH_00696	2.78e-207	WQ51_06230	-	-	U	ko:K05832	-	ko00000,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
BNEFENCH_00697	9.65e-180	-	-	-	S	ko:K05833	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
BNEFENCH_00698	1.43e-223	-	1.1.1.1	-	C	ko:K00001	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	Zinc-binding dehydrogenase
BNEFENCH_00699	0.0	pacL3	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	Cation transporter/ATPase, N-terminus
BNEFENCH_00700	8.07e-233	ykcC	-	GT2	M	ko:K20534	-	ko00000,ko01000,ko01005,ko02000	Glycosyl transferase family 2
BNEFENCH_00701	0.0	ykcB	-	-	M	-	-	-	Dolichyl-phosphate-mannose-protein mannosyltransferase
BNEFENCH_00702	3.08e-93	-	-	-	S	-	-	-	GtrA-like protein
BNEFENCH_00703	3.91e-159	ciaR	-	-	K	ko:K14983	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko02022	cheY-homologous receiver domain
BNEFENCH_00704	4.26e-309	ciaH	2.7.13.3	-	T	ko:K14982	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	His Kinase A (phosphoacceptor) domain
BNEFENCH_00705	2.42e-88	-	-	-	S	-	-	-	Belongs to the HesB IscA family
BNEFENCH_00706	0.0	-	-	-	QT	-	-	-	PucR C-terminal helix-turn-helix domain
BNEFENCH_00707	1.12e-208	-	-	-	S	-	-	-	KR domain
BNEFENCH_00708	1.41e-204	adc	4.1.1.4	-	Q	ko:K01574	ko00072,ko00640,ko01100,map00072,map00640,map01100	ko00000,ko00001,ko00002,ko01000	Acetoacetate decarboxylase (ADC)
BNEFENCH_00709	2.41e-156	ydgI	-	-	C	-	-	-	Nitroreductase family
BNEFENCH_00710	1.24e-260	lldD	1.13.12.4	-	C	ko:K00467	ko00620,map00620	ko00000,ko00001,ko01000	IMP dehydrogenase / GMP reductase domain
BNEFENCH_00713	6.22e-243	-	-	-	K	-	-	-	DNA-binding helix-turn-helix protein
BNEFENCH_00714	1.17e-77	-	-	-	K	ko:K10947	-	ko00000,ko03000	Transcriptional regulator PadR-like family
BNEFENCH_00715	2.7e-62	ygbF	-	-	S	-	-	-	Sugar efflux transporter for intercellular exchange
BNEFENCH_00716	4.91e-55	-	-	-	-	-	-	-	-
BNEFENCH_00717	2.02e-245	-	1.1.1.1, 1.6.5.5	-	C	ko:K00001,ko:K00344	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily
BNEFENCH_00719	1.32e-71	-	-	-	-	-	-	-	-
BNEFENCH_00720	1.03e-103	-	-	-	-	-	-	-	-
BNEFENCH_00721	5.77e-267	XK27_05220	-	-	S	-	-	-	AI-2E family transporter
BNEFENCH_00722	1.58e-33	-	-	-	-	-	-	-	-
BNEFENCH_00723	9.86e-146	lexA	3.4.21.88	-	K	ko:K01356	-	ko00000,ko00002,ko01000,ko01002,ko03400	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
BNEFENCH_00724	8.86e-60	-	-	-	-	-	-	-	-
BNEFENCH_00725	2.43e-213	mleP2	-	-	S	ko:K07088	-	ko00000	Transporter, auxin efflux carrier (AEC) family protein
BNEFENCH_00726	8.37e-116	-	-	-	S	-	-	-	Flavin reductase like domain
BNEFENCH_00727	6.83e-91	-	-	-	-	-	-	-	-
BNEFENCH_00728	3.12e-129	fthC	6.3.3.2	-	H	ko:K01934	ko00670,ko01100,map00670,map01100	ko00000,ko00001,ko01000	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
BNEFENCH_00729	1.99e-80	yeaO	-	-	S	-	-	-	Protein of unknown function, DUF488
BNEFENCH_00730	2.2e-223	-	-	-	P	ko:K03284	-	ko00000,ko02000	CorA-like Mg2+ transporter protein
BNEFENCH_00731	4.86e-201	mleR	-	-	K	-	-	-	LysR family
BNEFENCH_00732	0.0	mleS	1.1.1.38, 4.1.1.101	-	C	ko:K00027,ko:K22212	ko00620,ko01120,ko01200,ko02020,map00620,map01120,map01200,map02020	ko00000,ko00001,ko01000	Malic enzyme
BNEFENCH_00733	3.58e-217	mleP	-	-	S	ko:K07088	-	ko00000	Sodium Bile acid symporter family
BNEFENCH_00734	8.23e-117	tpx	1.11.1.15	-	O	ko:K11065	-	ko00000,ko01000	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
BNEFENCH_00735	2.28e-113	-	-	-	C	-	-	-	FMN binding
BNEFENCH_00736	7.65e-223	-	-	-	K	ko:K20373,ko:K20374	ko02024,map02024	ko00000,ko00001,ko03000	Helix-turn-helix XRE-family like proteins
BNEFENCH_00737	0.0	-	-	-	V	-	-	-	ABC transporter transmembrane region
BNEFENCH_00738	0.0	pepF	-	-	E	-	-	-	Oligopeptidase F
BNEFENCH_00739	3.86e-78	-	-	-	-	-	-	-	-
BNEFENCH_00740	1.55e-169	-	-	-	IQ	-	-	-	Belongs to the short-chain dehydrogenases reductases (SDR) family
BNEFENCH_00741	4.06e-107	ndk	2.7.4.6	-	F	ko:K00940	ko00230,ko00240,ko00983,ko01100,ko01110,ko01130,ko04016,map00230,map00240,map00983,map01100,map01110,map01130,map04016	ko00000,ko00001,ko00002,ko01000,ko04131	Belongs to the NDK family
BNEFENCH_00742	0.0	yfgQ	-	-	P	ko:K12952	-	ko00000,ko01000	E1-E2 ATPase
BNEFENCH_00743	1.82e-229	-	3.4.11.5	-	I	ko:K01259	ko00330,map00330	ko00000,ko00001,ko01000,ko01002	carboxylic ester hydrolase activity
BNEFENCH_00744	1.69e-58	-	-	-	-	-	-	-	-
BNEFENCH_00745	4.89e-122	-	-	-	J	-	-	-	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BNEFENCH_00746	6.56e-255	napA	-	-	P	-	-	-	Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
BNEFENCH_00747	7.46e-157	XK27_05175	3.1.3.18	-	S	ko:K01091	ko00630,ko01100,ko01110,ko01130,map00630,map01100,map01110,map01130	ko00000,ko00001,ko01000	haloacid dehalogenase-like hydrolase
BNEFENCH_00748	6.42e-101	-	-	-	K	-	-	-	Transcriptional regulator
BNEFENCH_00749	2.81e-230	ybcH	-	-	D	ko:K06889	-	ko00000	Alpha beta
BNEFENCH_00750	3.83e-109	nrdI	-	-	F	ko:K03647	-	ko00000	Belongs to the NrdI family
BNEFENCH_00751	1.77e-199	dkgB	-	-	S	-	-	-	reductase
BNEFENCH_00752	6.77e-201	-	-	-	-	-	-	-	-
BNEFENCH_00753	6.16e-199	-	-	-	S	-	-	-	Alpha beta hydrolase
BNEFENCH_00754	7.76e-152	yviA	-	-	S	-	-	-	Protein of unknown function (DUF421)
BNEFENCH_00755	2.6e-96	-	-	-	S	-	-	-	Protein of unknown function (DUF3290)
BNEFENCH_00757	1.39e-282	metE	2.1.1.14	-	E	ko:K00549	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	methionine synthase, vitamin-B12 independent
BNEFENCH_00758	1.69e-112	luxS	4.4.1.21	-	H	ko:K07173	ko00270,ko01100,ko01230,ko02024,ko02026,ko05111,map00270,map01100,map01230,map02024,map02026,map05111	ko00000,ko00001,ko00002,ko01000	Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
BNEFENCH_00759	1.3e-136	yjbF	-	-	S	-	-	-	SNARE associated Golgi protein
BNEFENCH_00760	2.95e-133	ruvA	3.6.4.12	-	L	ko:K03550	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
BNEFENCH_00761	1.59e-241	ruvB	3.6.4.12	-	L	ko:K03551	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
BNEFENCH_00762	4.54e-264	queA	2.4.99.17	-	J	ko:K07568	-	ko00000,ko01000,ko03016	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
BNEFENCH_00763	3.46e-289	tgt	2.4.2.29	-	F	ko:K00773	-	ko00000,ko01000,ko03016	Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
BNEFENCH_00764	1.83e-87	yajC	-	-	U	ko:K03210	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Preprotein translocase
BNEFENCH_00765	0.0	adhE	1.1.1.1, 1.2.1.10	-	C	ko:K04072	ko00010,ko00071,ko00350,ko00620,ko00625,ko00626,ko00650,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00620,map00625,map00626,map00650,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	belongs to the iron- containing alcohol dehydrogenase family
BNEFENCH_00766	2.06e-150	mntR	-	-	K	ko:K03709	-	ko00000,ko03000	Helix-turn-helix diphteria tox regulatory element
BNEFENCH_00767	0.0	zwf	1.1.1.363, 1.1.1.49	-	G	ko:K00036	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,ko05230,map00030,map00480,map01100,map01110,map01120,map01130,map01200,map05230	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
BNEFENCH_00768	7.25e-264	dinB	2.7.7.7	-	L	ko:K02346	-	ko00000,ko01000,ko03400	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
BNEFENCH_00769	1.13e-307	ytoI	-	-	K	-	-	-	DRTGG domain
BNEFENCH_00770	3.03e-229	nrnA	3.1.13.3, 3.1.3.7	-	S	ko:K06881	ko00920,ko01100,ko01120,map00920,map01100,map01120	ko00000,ko00001,ko01000,ko03400	DHHA1 domain protein
BNEFENCH_00771	0.0	cshB	3.6.4.13	-	JKL	ko:K05592,ko:K18692	ko03018,map03018	ko00000,ko00001,ko01000,ko03009,ko03019	DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
BNEFENCH_00772	1.55e-223	-	-	-	-	-	-	-	-
BNEFENCH_00773	0.0	alaS	6.1.1.7	-	J	ko:K01872	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
BNEFENCH_00775	4.89e-58	yrzL	-	-	S	-	-	-	Belongs to the UPF0297 family
BNEFENCH_00776	2.67e-96	yrrK	-	-	J	ko:K07447	-	ko00000,ko01000	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
BNEFENCH_00777	1.3e-69	yrzB	-	-	S	-	-	-	Belongs to the UPF0473 family
BNEFENCH_00778	2.84e-48	-	-	-	D	ko:K09888	-	ko00000,ko03036	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
BNEFENCH_00779	5.42e-119	cvpA	-	-	S	-	-	-	Colicin V production protein
BNEFENCH_00780	0.0	mutS2	-	-	L	ko:K07456	ko03430,map03430	ko00000,ko00001,ko03400	Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
BNEFENCH_00781	3.64e-70	trxA	-	-	O	ko:K03671	ko04621,ko05418,map04621,map05418	ko00000,ko00001,ko03110	Belongs to the thioredoxin family
BNEFENCH_00782	1.04e-27	dltX	-	-	S	-	-	-	D-Ala-teichoic acid biosynthesis protein
BNEFENCH_00783	0.0	dltA	6.1.1.13	-	H	ko:K03367	ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01000,ko01504	Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
BNEFENCH_00784	1.99e-303	dltB	-	-	M	ko:K03739	ko01503,ko02020,ko05150,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01504	MBOAT, membrane-bound O-acyltransferase family
BNEFENCH_00785	6.97e-49	dltC	6.1.1.13	-	J	ko:K14188	ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01000,ko01504	Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
BNEFENCH_00786	8.29e-312	dltD	-	-	M	ko:K03740	ko01503,ko02020,ko05150,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01504	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
BNEFENCH_00787	6.77e-111	yslB	-	-	S	-	-	-	Protein of unknown function (DUF2507)
BNEFENCH_00788	0.0	murI	3.6.1.66, 5.1.1.3	-	M	ko:K01776,ko:K02428	ko00230,ko00471,ko01100,map00230,map00471,map01100	ko00000,ko00001,ko01000,ko01011	Provides the (R)-glutamate required for cell wall biosynthesis
BNEFENCH_00789	1.64e-125	ysnB	-	-	S	ko:K07095	-	ko00000	Phosphoesterase
BNEFENCH_00790	1.9e-175	gla	-	-	U	ko:K02440	-	ko00000,ko02000	Major intrinsic protein
BNEFENCH_00791	2.67e-111	ykuL	-	-	S	-	-	-	CBS domain
BNEFENCH_00792	1.62e-199	-	-	-	S	ko:K08974	-	ko00000	Domain of unknown function (DUF368)
BNEFENCH_00793	6.86e-198	ykuT	-	-	M	ko:K16052,ko:K22044	-	ko00000,ko02000	mechanosensitive ion channel
BNEFENCH_00794	1.49e-46	ytxG	-	-	S	-	-	-	protein containing a divergent version of the methyl-accepting chemotaxis-like domain
BNEFENCH_00795	4.84e-114	ytxH	-	-	S	-	-	-	YtxH-like protein
BNEFENCH_00796	7.49e-117	yrxA	-	-	S	ko:K07105	-	ko00000	3H domain
BNEFENCH_00797	1.8e-273	pepQ	3.4.13.9	-	E	ko:K01271	-	ko00000,ko01000,ko01002	Creatinase/Prolidase N-terminal domain
BNEFENCH_00798	3.03e-232	ccpA	-	-	K	ko:K02529	-	ko00000,ko03000	catabolite control protein A
BNEFENCH_00799	0.0	pbp1B	2.4.1.129	GT51	M	ko:K03693,ko:K12551	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01003,ko01011	Penicillin binding protein transpeptidase domain
BNEFENCH_00800	8.72e-163	yfnB	3.8.1.2	-	S	ko:K01560,ko:K07025	ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120	ko00000,ko00001,ko01000	HAD-hyrolase-like
BNEFENCH_00801	5.87e-177	birA	6.3.4.15	-	H	ko:K03524	ko00780,ko01100,map00780,map01100	ko00000,ko00001,ko01000,ko03000	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
BNEFENCH_00802	0.0	pepV	3.5.1.18	-	E	ko:K01270,ko:K01274,ko:K01439	ko00300,ko00480,ko01100,ko01120,ko01230,map00300,map00480,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000,ko01002	dipeptidase PepV
BNEFENCH_00803	0.0	glpQ	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	Glycerophosphoryl diester phosphodiesterase family
BNEFENCH_00804	9.98e-73	-	-	-	-	-	-	-	-
BNEFENCH_00805	1.7e-240	yibE	-	-	S	-	-	-	overlaps another CDS with the same product name
BNEFENCH_00806	1.33e-150	yibF	-	-	S	-	-	-	overlaps another CDS with the same product name
BNEFENCH_00807	7.41e-148	-	-	-	S	-	-	-	Calcineurin-like phosphoesterase
BNEFENCH_00808	0.0	yunD	3.1.3.5	-	F	ko:K01081	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the 5'-nucleotidase family
BNEFENCH_00809	2.93e-150	yutD	-	-	S	-	-	-	Protein of unknown function (DUF1027)
BNEFENCH_00810	1.34e-186	nagD	3.1.3.41	-	G	ko:K01101	ko00627,ko01120,map00627,map01120	ko00000,ko00001,ko01000	Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
BNEFENCH_00811	6.43e-146	-	-	-	S	-	-	-	Protein of unknown function (DUF1461)
BNEFENCH_00812	8.69e-149	dedA	-	-	S	ko:K03975	-	ko00000	SNARE-like domain protein
BNEFENCH_00813	2.26e-115	pgpA	3.1.3.27	-	I	ko:K01095	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Phosphatidylglycerophosphatase A
BNEFENCH_00814	6.41e-236	yumC	1.18.1.2, 1.19.1.1	-	C	ko:K21567	-	ko00000,ko01000	Ferredoxin--NADP reductase
BNEFENCH_00815	2.99e-140	ppiB	5.2.1.8	-	G	ko:K03768	-	ko00000,ko01000,ko03110	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
BNEFENCH_00816	1.17e-82	yugI	-	-	J	ko:K07570	-	ko00000	general stress protein
BNEFENCH_00842	8.3e-123	sigH	-	-	K	ko:K03088,ko:K03091,ko:K12296	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko03000,ko03021	DNA-templated transcription, initiation
BNEFENCH_00843	0.0	ybeC	-	-	E	-	-	-	amino acid
BNEFENCH_00845	1.09e-294	pimB	2.4.1.337	GT4	M	ko:K19002	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000,ko01003	Glycosyltransferase, group 1 family protein
BNEFENCH_00846	4.62e-252	cpoA	2.4.1.208	GT4	M	ko:K13677,ko:K13678	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000,ko01003	Glycosyltransferase, group 1 family protein
BNEFENCH_00847	1.58e-220	mprF	-	-	I	ko:K07027	-	ko00000,ko02000	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
BNEFENCH_00849	2.32e-279	araT	-	-	E	ko:K00841	ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase
BNEFENCH_00850	1.52e-57	ykuJ	-	-	S	-	-	-	Protein of unknown function (DUF1797)
BNEFENCH_00851	0.0	ltaS	2.7.8.20	-	M	ko:K19005	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
BNEFENCH_00852	8.92e-105	perR	-	-	P	ko:K03711,ko:K09825	-	ko00000,ko03000	Belongs to the Fur family
BNEFENCH_00853	0.0	-	3.2.1.10, 3.2.1.20	GH13,GH31	G	ko:K01182,ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Alpha amylase, catalytic domain protein
BNEFENCH_00854	1.12e-206	-	-	-	J	-	-	-	Methyltransferase domain
BNEFENCH_00855	5.43e-185	rdrB	-	-	K	ko:K02444,ko:K22103	-	ko00000,ko03000	DeoR C terminal sensor domain
BNEFENCH_00856	7.5e-59	pts36A	2.7.1.200	-	G	ko:K02773	ko00052,ko01100,ko02060,map00052,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
BNEFENCH_00857	5.31e-69	-	2.7.1.200	-	G	ko:K02774	ko00052,ko01100,ko02060,map00052,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
BNEFENCH_00858	0.0	pts36C	-	-	G	ko:K02775	ko00052,ko01100,ko02060,map00052,map01100,map02060	ko00000,ko00001,ko00002,ko02000	PTS system sugar-specific permease component
BNEFENCH_00859	5.04e-174	-	4.1.2.17	-	G	ko:K01628	ko00051,ko01120,map00051,map01120	ko00000,ko00001,ko01000	Class II Aldolase and Adducin N-terminal domain
BNEFENCH_00860	1.1e-172	-	-	-	K	ko:K03492	-	ko00000,ko03000	UbiC transcription regulator-associated domain protein
BNEFENCH_00861	5.53e-60	-	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
BNEFENCH_00862	4.29e-226	-	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
BNEFENCH_00863	0.0	mngB	3.2.1.170	GH38	G	ko:K15524	-	ko00000,ko01000	Glycosyl hydrolases family 38 N-terminal domain
BNEFENCH_00864	1.62e-313	-	-	-	S	ko:K09704	-	ko00000	Metal-independent alpha-mannosidase (GH125)
BNEFENCH_00865	2.12e-195	ypbG	2.7.1.2	-	GK	ko:K00845	ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	ROK family
BNEFENCH_00866	0.0	bgl	3.2.1.21, 3.2.1.85, 3.2.1.86	GT1	G	ko:K01220,ko:K01223,ko:K05350	ko00010,ko00052,ko00460,ko00500,ko00940,ko01100,ko01110,map00010,map00052,map00460,map00500,map00940,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
BNEFENCH_00867	2.99e-65	ptcB	2.7.1.196, 2.7.1.205	-	G	ko:K02760	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
BNEFENCH_00868	5.54e-59	celC	2.7.1.196, 2.7.1.205	-	G	ko:K02759	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIA subunit
BNEFENCH_00869	0.0	-	-	-	G	-	-	-	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
BNEFENCH_00870	5.89e-138	-	4.1.2.14, 4.1.3.42	-	G	ko:K01625	ko00030,ko00630,ko01100,ko01120,ko01200,map00030,map00630,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	KDPG and KHG aldolase
BNEFENCH_00871	1.69e-102	-	2.7.1.200	-	GT	ko:K02773	ko00052,ko01100,ko02060,map00052,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
BNEFENCH_00872	2.9e-61	sgcB	2.7.1.200	-	G	ko:K02774	ko00052,ko01100,ko02060,map00052,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
BNEFENCH_00873	1.15e-313	-	-	-	G	ko:K02775	ko00052,ko01100,ko02060,map00052,map01100,map02060	ko00000,ko00001,ko00002,ko02000	PTS system sugar-specific permease component
BNEFENCH_00874	7.24e-287	dgoD	4.2.1.6, 4.2.1.8	-	M	ko:K01684,ko:K08323	ko00040,ko00052,ko01100,ko01120,map00040,map00052,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Mandelate racemase muconate lactonizing enzyme
BNEFENCH_00875	2.01e-116	-	-	-	-	-	-	-	-
BNEFENCH_00877	2.03e-34	-	-	-	T	-	-	-	PFAM SpoVT AbrB
BNEFENCH_00878	7.55e-170	-	-	-	L	-	-	-	Transposase, IS116 IS110 IS902 family
BNEFENCH_00879	0.0	glpK	2.7.1.30	-	F	ko:K00864	ko00561,ko01100,ko03320,ko04626,map00561,map01100,map03320,map04626	ko00000,ko00001,ko01000,ko04147	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
BNEFENCH_00880	2.36e-167	rpl	-	-	K	-	-	-	Helix-turn-helix domain, rpiR family
BNEFENCH_00881	7.67e-223	fruK-1	2.7.1.56	-	H	ko:K00882	ko00051,map00051	ko00000,ko00001,ko01000	pfkB family carbohydrate kinase
BNEFENCH_00882	0.0	fruC	2.7.1.202	-	GT	ko:K02769,ko:K02770	ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
BNEFENCH_00883	5.24e-116	-	-	-	-	-	-	-	-
BNEFENCH_00884	4.42e-154	ydfK	-	-	S	ko:K07150	-	ko00000	Protein of unknown function (DUF554)
BNEFENCH_00885	2.66e-233	recA	-	-	L	ko:K03553	ko03440,map03440	ko00000,ko00001,ko00002,ko03400	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
BNEFENCH_00886	3.35e-288	-	-	-	EK	-	-	-	Aminotransferase, class I
BNEFENCH_00887	8.49e-211	-	-	-	K	-	-	-	LysR substrate binding domain
BNEFENCH_00888	3.81e-115	rnhA	3.1.26.4	-	L	ko:K03469	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
BNEFENCH_00889	7.22e-197	yitU	3.1.3.104	-	S	ko:K21064	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	hydrolase
BNEFENCH_00890	4.48e-161	gpmB	-	-	G	ko:K15640	-	ko00000	Phosphoglycerate mutase family
BNEFENCH_00891	3.43e-138	-	-	-	S	-	-	-	Protein of unknown function (DUF1275)
BNEFENCH_00892	1.99e-16	-	-	-	-	-	-	-	-
BNEFENCH_00893	4.04e-79	-	-	-	-	-	-	-	-
BNEFENCH_00894	6.84e-186	-	-	-	S	-	-	-	hydrolase
BNEFENCH_00895	6.25e-246	yghZ	-	-	C	ko:K19265	-	ko00000,ko01000	Aldo keto reductase family protein
BNEFENCH_00896	0.0	uvrA3	-	-	L	ko:K03701	ko03420,map03420	ko00000,ko00001,ko03400	excinuclease ABC
BNEFENCH_00897	1.06e-90	-	-	-	K	-	-	-	MarR family
BNEFENCH_00898	3.47e-147	yagB	-	-	S	ko:K06950	-	ko00000	Metal dependent phosphohydrolases with conserved 'HD' motif.
BNEFENCH_00900	1.15e-147	-	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
BNEFENCH_00901	6.52e-222	ydiA	-	-	P	ko:K11041	ko05150,map05150	ko00000,ko00001,ko02042	Voltage-dependent anion channel
BNEFENCH_00902	1.62e-192	rlrG	-	-	K	ko:K21900	-	ko00000,ko03000	Transcriptional regulator
BNEFENCH_00903	0.0	-	-	-	L	-	-	-	DNA helicase
BNEFENCH_00905	0.0	choS	-	-	EM	ko:K05845,ko:K05846	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Periplasmic glycine betaine choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)
BNEFENCH_00906	6.07e-225	proV	-	-	E	ko:K05847	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter, ATP-binding protein
BNEFENCH_00907	7.49e-316	gshR	1.8.1.7	-	C	ko:K00383	ko00480,ko04918,map00480,map04918	ko00000,ko00001,ko01000	Glutathione reductase
BNEFENCH_00908	7.28e-25	-	-	-	V	-	-	-	ATPases associated with a variety of cellular activities
BNEFENCH_00909	2.22e-170	-	-	-	V	-	-	-	ATPases associated with a variety of cellular activities
BNEFENCH_00910	7.8e-189	-	-	-	V	-	-	-	efflux transmembrane transporter activity
BNEFENCH_00911	2.86e-244	trpS	6.1.1.2	-	J	ko:K01867	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-I aminoacyl-tRNA synthetase family
BNEFENCH_00912	1.15e-132	lemA	-	-	S	ko:K03744	-	ko00000	LemA family
BNEFENCH_00913	7.19e-157	-	-	-	S	ko:K06872	-	ko00000	TPM domain
BNEFENCH_00914	5.58e-306	dinF	-	-	V	-	-	-	MatE
BNEFENCH_00915	2.76e-120	ywnH	2.3.1.183	-	M	ko:K03823	ko00440,ko01130,map00440,map01130	ko00000,ko00001,ko01000	Acetyltransferase (GNAT) domain
BNEFENCH_00916	6.93e-197	-	-	-	Q	-	-	-	Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
BNEFENCH_00917	2.04e-223	ydhF	-	-	S	-	-	-	Aldo keto reductase
BNEFENCH_00918	0.0	ppx3	3.6.1.11, 3.6.1.40	-	FP	ko:K01524	ko00230,map00230	ko00000,ko00001,ko01000	exopolyphosphatase
BNEFENCH_00919	0.0	ppk	2.7.4.1	-	P	ko:K00937	ko00190,ko03018,map00190,map03018	ko00000,ko00001,ko01000,ko03019	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
BNEFENCH_00920	2.57e-223	ppx	3.6.1.11, 3.6.1.40	-	FP	ko:K01524	ko00230,map00230	ko00000,ko00001,ko01000	exopolyphosphatase
BNEFENCH_00921	5.77e-204	ypuA	-	-	S	-	-	-	Protein of unknown function (DUF1002)
BNEFENCH_00922	4.7e-50	-	-	-	-	-	-	-	-
BNEFENCH_00923	3.21e-125	yxkA	-	-	S	ko:K06910	-	ko00000	Phosphatidylethanolamine-binding protein
BNEFENCH_00924	3.77e-218	-	-	-	-	-	-	-	-
BNEFENCH_00925	6.41e-24	-	-	-	-	-	-	-	-
BNEFENCH_00926	4.66e-164	cobB	-	-	K	ko:K12410	-	ko00000,ko01000	Sir2 family
BNEFENCH_00927	9.14e-139	yiiE	-	-	S	-	-	-	Protein of unknown function (DUF1211)
BNEFENCH_00928	3.11e-218	-	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	Belongs to the LDH MDH superfamily
BNEFENCH_00929	2.58e-117	-	3.6.1.55	-	F	ko:K03574	-	ko00000,ko01000,ko03400	NUDIX domain
BNEFENCH_00930	9.84e-195	yunF	-	-	F	-	-	-	Protein of unknown function DUF72
BNEFENCH_00931	4.11e-223	pepI	3.4.11.5	-	E	ko:K01259	ko00330,map00330	ko00000,ko00001,ko01000,ko01002	Releases the N-terminal proline from various substrates
BNEFENCH_00932	0.0	metG	6.1.1.10	-	J	ko:K01874	ko00450,ko00970,map00450,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BNEFENCH_00933	0.0	-	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter
BNEFENCH_00934	0.0	-	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter
BNEFENCH_00935	1.18e-198	-	-	-	T	-	-	-	GHKL domain
BNEFENCH_00936	1.67e-159	-	-	-	T	ko:K07705	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	LytTr DNA-binding domain
BNEFENCH_00937	4.98e-220	yqhA	-	-	G	-	-	-	Aldose 1-epimerase
BNEFENCH_00938	1.35e-239	lacD	4.1.2.40	-	G	ko:K01635	ko00052,ko01100,ko02024,map00052,map01100,map02024	ko00000,ko00001,ko01000	Belongs to the aldolase LacD family
BNEFENCH_00939	3e-103	manR	2.7.1.194, 2.7.1.200, 2.7.1.202, 2.7.1.204	-	G	ko:K02538,ko:K02768,ko:K02769,ko:K02770,ko:K02773,ko:K02806,ko:K02821,ko:K03491,ko:K11201,ko:K20112	ko00051,ko00052,ko00053,ko01100,ko01120,ko02060,map00051,map00052,map00053,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000,ko03000	phosphoenolpyruvate-dependent sugar phosphotransferase system
BNEFENCH_00940	7.18e-187	tatD	-	-	L	ko:K03424	-	ko00000,ko01000	hydrolase, TatD family
BNEFENCH_00941	7.92e-129	rnmV	3.1.26.8	-	J	ko:K05985	-	ko00000,ko01000	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
BNEFENCH_00942	2.04e-202	ksgA	2.1.1.182	-	J	ko:K02528	-	ko00000,ko01000,ko03009	Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
BNEFENCH_00943	4.13e-51	veg	-	-	S	-	-	-	Biofilm formation stimulator VEG
BNEFENCH_00944	6.63e-232	ispE	2.7.1.148	-	F	ko:K00919,ko:K16924	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko02000	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
BNEFENCH_00945	1.99e-205	czcD	-	-	P	ko:K16264	-	ko00000,ko02000	cation diffusion facilitator family transporter
BNEFENCH_00946	1.38e-156	ybbM	-	-	S	ko:K02069	-	ko00000,ko00002,ko02000	Uncharacterised protein family (UPF0014)
BNEFENCH_00947	1.29e-154	ybbL	-	-	S	ko:K02068	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
BNEFENCH_00948	1.01e-193	purR	-	-	F	ko:K09685	-	ko00000,ko03000	pur operon repressor
BNEFENCH_00949	8.48e-285	ysaA	-	-	V	-	-	-	RDD family
BNEFENCH_00950	3.29e-299	glmU	2.3.1.157, 2.7.7.23	-	M	ko:K04042	ko00520,ko01100,ko01130,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
BNEFENCH_00951	2.2e-225	prs	2.7.6.1	-	F	ko:K00948	ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
BNEFENCH_00952	3.78e-74	nudA	-	-	S	-	-	-	ASCH
BNEFENCH_00953	1.68e-104	-	-	-	E	-	-	-	glutamate:sodium symporter activity
BNEFENCH_00954	1.31e-77	mscL	-	-	M	ko:K03282	-	ko00000,ko02000	Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
BNEFENCH_00955	3.04e-237	-	-	-	S	-	-	-	DUF218 domain
BNEFENCH_00956	1.41e-103	mutT	3.6.1.55	-	L	ko:K03574	-	ko00000,ko01000,ko03400	NUDIX domain
BNEFENCH_00957	0.0	ywfO	-	-	S	ko:K06885	-	ko00000	HD domain protein
BNEFENCH_00958	4.89e-201	lipL	2.3.1.200, 2.3.1.204	-	H	ko:K16869,ko:K18821	-	ko00000,ko01000	biotin lipoate A B protein ligase
BNEFENCH_00959	3.48e-103	ywiB	-	-	S	-	-	-	Domain of unknown function (DUF1934)
BNEFENCH_00960	1.15e-111	rpoE	-	-	K	ko:K03048	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko03021,ko03400	Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
BNEFENCH_00961	3.42e-202	ybbB	-	-	S	-	-	-	Protein of unknown function (DUF1211)
BNEFENCH_00962	0.0	pyrG	6.3.4.2	-	F	ko:K01937	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
BNEFENCH_00963	9.48e-300	murA	2.5.1.7	-	M	ko:K00790	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
BNEFENCH_00964	2.28e-57	rpmE2	-	-	J	ko:K02909	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L31
BNEFENCH_00965	2.29e-87	-	-	-	-	-	-	-	-
BNEFENCH_00966	2.61e-163	-	-	-	-	-	-	-	-
BNEFENCH_00967	4.35e-159	-	-	-	S	-	-	-	Tetratricopeptide repeat
BNEFENCH_00968	1.94e-07	-	-	-	-	-	-	-	-
BNEFENCH_00969	4.87e-187	-	-	-	-	-	-	-	-
BNEFENCH_00970	0.0	murF	6.3.2.10	-	M	ko:K01929	ko00300,ko00550,ko01100,ko01502,map00300,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
BNEFENCH_00971	0.0	cshA	3.6.4.13	-	F	ko:K05592	ko03018,map03018	ko00000,ko00001,ko01000,ko03009,ko03019	DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
BNEFENCH_00972	2.63e-82	acpS	2.7.8.7	-	I	ko:K00997	ko00770,map00770	ko00000,ko00001,ko01000	Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
BNEFENCH_00973	2.69e-276	alr	5.1.1.1	-	E	ko:K01775	ko00473,ko01100,ko01502,map00473,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
BNEFENCH_00974	3.28e-44	-	-	-	-	-	-	-	-
BNEFENCH_00975	5.68e-83	ndoA	-	-	L	ko:K07171	-	ko00000,ko01000,ko02048	Toxic component of a toxin-antitoxin (TA) module
BNEFENCH_00976	1.63e-111	queT	-	-	S	-	-	-	QueT transporter
BNEFENCH_00977	0.0	gltA	1.4.1.13, 1.4.1.14, 1.4.7.1	-	E	ko:K00265,ko:K00284	ko00250,ko00630,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00250,map00630,map00910,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko01000	GXGXG motif
BNEFENCH_00978	0.0	gltD	1.4.1.13, 1.4.1.14	-	E	ko:K00266	ko00250,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00250,map00910,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko01000	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
BNEFENCH_00979	8.05e-167	yciB	-	-	M	-	-	-	ErfK YbiS YcfS YnhG
BNEFENCH_00980	1.34e-154	-	-	-	S	-	-	-	(CBS) domain
BNEFENCH_00981	0.0	-	-	-	S	-	-	-	Putative peptidoglycan binding domain
BNEFENCH_00982	5.04e-232	ldh	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	Belongs to the LDH MDH superfamily. LDH family
BNEFENCH_00983	4.28e-131	pth	3.1.1.29	-	J	ko:K01056	-	ko00000,ko01000,ko03012	The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
BNEFENCH_00984	0.0	mfd	-	-	L	ko:K03723	ko03420,map03420	ko00000,ko00001,ko01000,ko03400	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
BNEFENCH_00985	0.0	yabM	-	-	S	ko:K03328	-	ko00000	Polysaccharide biosynthesis protein
BNEFENCH_00986	1.99e-53	yabO	-	-	J	-	-	-	S4 domain protein
BNEFENCH_00987	7.17e-87	divIC	-	-	D	ko:K05589,ko:K13052	-	ko00000,ko03036	cell cycle
BNEFENCH_00988	1.17e-105	yabR	-	-	J	ko:K07571	-	ko00000	RNA binding
BNEFENCH_00989	1.09e-309	tilS	2.4.2.8, 6.3.4.19	-	J	ko:K04075,ko:K15780	ko00230,ko01100,ko01110,map00230,map01100,map01110	ko00000,ko00001,ko01000,ko03016	Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
BNEFENCH_00990	1.14e-124	hpt	2.4.2.8	-	F	ko:K00760	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the purine pyrimidine phosphoribosyltransferase family
BNEFENCH_00991	0.0	ftsH	-	-	O	ko:K03798	-	ko00000,ko00002,ko01000,ko01002,ko03110	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
BNEFENCH_00992	0.0	-	-	-	S	-	-	-	Leucine-rich repeat (LRR) protein
BNEFENCH_00993	1.67e-250	-	-	-	S	-	-	-	Protein of unknown function C-terminal (DUF3324)
BNEFENCH_00994	9.64e-243	-	-	-	S	-	-	-	Bacterial protein of unknown function (DUF916)
BNEFENCH_00995	1.52e-208	-	-	-	S	-	-	-	WxL domain surface cell wall-binding
BNEFENCH_00996	5.11e-209	hslO	-	-	O	ko:K04083	-	ko00000,ko03110	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
BNEFENCH_00997	5.32e-242	dus	-	-	J	ko:K05540	-	ko00000,ko01000,ko03016	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
BNEFENCH_00998	0.0	lysS	6.1.1.6	-	J	ko:K04567	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-II aminoacyl-tRNA synthetase family
BNEFENCH_00999	5.93e-12	-	-	-	-	-	-	-	-
BNEFENCH_01004	1.14e-90	-	-	-	-	-	-	-	-
BNEFENCH_01005	7.89e-268	metK	2.5.1.6	-	H	ko:K00789	ko00270,ko01100,ko01110,ko01230,map00270,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
BNEFENCH_01006	0.0	mdr	-	-	EGP	-	-	-	Major Facilitator
BNEFENCH_01007	6.89e-107	-	-	-	K	-	-	-	MerR HTH family regulatory protein
BNEFENCH_01008	0.0	ycnB	-	-	U	-	-	-	Belongs to the major facilitator superfamily
BNEFENCH_01009	8.79e-154	-	-	-	S	-	-	-	Domain of unknown function (DUF4811)
BNEFENCH_01010	7.4e-155	yodM	3.6.1.27	-	I	ko:K19302	ko00550,map00550	ko00000,ko00001,ko01000,ko01011	Acid phosphatase homologues
BNEFENCH_01011	0.0	leuS	6.1.1.4	-	J	ko:K01869	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Belongs to the class-I aminoacyl-tRNA synthetase family
BNEFENCH_01012	0.0	ytgP	-	-	S	ko:K03328	-	ko00000	Polysaccharide biosynthesis protein
BNEFENCH_01013	9.39e-167	rsuA	5.4.99.19	-	J	ko:K06183	-	ko00000,ko01000,ko03009	Belongs to the pseudouridine synthase RsuA family
BNEFENCH_01014	9.15e-45	yhcC	-	-	S	ko:K07069	-	ko00000	Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082)
BNEFENCH_01015	4.78e-183	nnrD	4.2.1.136, 5.1.99.6	-	H	ko:K17758,ko:K17759	-	ko00000,ko01000	Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
BNEFENCH_01016	2.55e-121	-	-	-	F	-	-	-	NUDIX domain
BNEFENCH_01018	1.18e-275	int3	-	-	L	-	-	-	Belongs to the 'phage' integrase family
BNEFENCH_01019	1.58e-27	-	-	-	-	-	-	-	-
BNEFENCH_01020	4.26e-85	-	-	-	S	-	-	-	MTH538 TIR-like domain (DUF1863)
BNEFENCH_01021	3.4e-32	-	-	-	S	-	-	-	Protein of unknown function (DUF4231)
BNEFENCH_01022	5.48e-13	-	-	-	-	-	-	-	-
BNEFENCH_01023	1.95e-110	-	-	-	J	ko:K10716	-	ko00000,ko02000	Ion transport protein
BNEFENCH_01025	1.03e-21	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
BNEFENCH_01027	4.65e-126	-	-	-	K	-	-	-	ORF6N domain
BNEFENCH_01029	3.74e-52	-	-	-	S	-	-	-	Domain of unknown function (DUF771)
BNEFENCH_01032	1.13e-215	yqaJ	-	-	L	-	-	-	YqaJ-like viral recombinase domain
BNEFENCH_01034	6.45e-208	recT	-	-	L	ko:K07455	-	ko00000,ko03400	RecT family
BNEFENCH_01035	1.65e-47	-	-	-	K	ko:K07727	-	ko00000,ko03000	Transcriptional regulator
BNEFENCH_01036	8.89e-159	-	-	-	L	-	-	-	Transcriptional regulator
BNEFENCH_01037	7.49e-196	pi346	-	-	L	ko:K02315	-	ko00000,ko03032	IstB-like ATP binding protein
BNEFENCH_01038	3.15e-95	rusA	-	-	L	-	-	-	Endodeoxyribonuclease RusA
BNEFENCH_01039	4.8e-52	-	-	-	-	-	-	-	-
BNEFENCH_01041	2.74e-96	-	-	-	-	-	-	-	-
BNEFENCH_01043	2.75e-09	-	-	-	S	-	-	-	GcrA cell cycle regulator
BNEFENCH_01044	1.45e-89	-	-	-	V	-	-	-	HNH endonuclease
BNEFENCH_01045	1.43e-80	-	-	-	-	-	-	-	-
BNEFENCH_01046	0.0	-	-	-	S	-	-	-	overlaps another CDS with the same product name
BNEFENCH_01047	9.79e-298	-	-	-	S	-	-	-	Phage portal protein
BNEFENCH_01048	2.39e-164	clpP	3.4.21.92	-	OU	ko:K01358	ko04112,ko04212,map04112,map04212	ko00000,ko00001,ko01000,ko01002	Belongs to the peptidase S14 family
BNEFENCH_01049	4.76e-288	-	-	-	S	-	-	-	Phage capsid family
BNEFENCH_01051	9.08e-71	-	-	-	-	-	-	-	-
BNEFENCH_01052	3.92e-76	-	-	-	S	-	-	-	Phage head-tail joining protein
BNEFENCH_01053	1.28e-75	-	-	-	-	-	-	-	-
BNEFENCH_01054	3.16e-89	-	-	-	-	-	-	-	-
BNEFENCH_01055	1.91e-151	-	-	-	-	-	-	-	-
BNEFENCH_01056	5.81e-80	-	-	-	-	-	-	-	-
BNEFENCH_01057	0.0	-	-	-	D	-	-	-	Phage tail tape measure protein
BNEFENCH_01058	5.04e-164	-	-	-	S	-	-	-	phage tail
BNEFENCH_01059	0.0	-	-	-	LM	-	-	-	gp58-like protein
BNEFENCH_01060	6.87e-93	-	-	-	-	-	-	-	-
BNEFENCH_01061	1.82e-50	-	-	-	-	-	-	-	-
BNEFENCH_01062	5.76e-61	-	-	-	-	-	-	-	-
BNEFENCH_01063	1.33e-71	hol	-	-	S	-	-	-	Bacteriophage holin
BNEFENCH_01065	6.53e-252	-	-	-	M	-	-	-	Bacteriophage peptidoglycan hydrolase
BNEFENCH_01066	0.0	tagE2	2.4.1.52	GT4	M	ko:K00712	-	ko00000,ko01000,ko01003	Glycosyl transferases group 1
BNEFENCH_01067	0.0	tagE3	2.4.1.52	GT4	M	ko:K00712	-	ko00000,ko01000,ko01003	Glycosyl transferases group 1
BNEFENCH_01068	9.78e-112	gpo	1.11.1.9	-	O	ko:K00432	ko00480,ko00590,ko04918,map00480,map00590,map04918	ko00000,ko00001,ko01000	Belongs to the glutathione peroxidase family
BNEFENCH_01071	1.82e-297	patB	4.4.1.8	-	E	ko:K14155	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko01000,ko01007	Aminotransferase, class I
BNEFENCH_01072	0.0	cpdA	-	-	S	-	-	-	Calcineurin-like phosphoesterase
BNEFENCH_01073	5.05e-52	XK27_08630	-	-	T	ko:K07166	-	ko00000	Belongs to the UPF0237 family
BNEFENCH_01074	3.93e-312	XK27_08635	-	-	S	ko:K09157	-	ko00000	UPF0210 protein
BNEFENCH_01075	4.22e-273	coiA	-	-	S	ko:K06198	-	ko00000	Competence protein
BNEFENCH_01076	1.84e-147	yjbH	-	-	Q	-	-	-	Thioredoxin
BNEFENCH_01077	7.28e-138	-	-	-	S	-	-	-	CYTH
BNEFENCH_01078	1.19e-158	yjbM	2.7.6.5	-	S	ko:K07816	ko00230,map00230	ko00000,ko00001,ko01000	RelA SpoT domain protein
BNEFENCH_01079	1.05e-193	nadK	2.7.1.23	-	F	ko:K00858	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
BNEFENCH_01080	1.22e-219	yjbO	5.4.99.23	-	G	ko:K06180	-	ko00000,ko01000,ko03009	Responsible for synthesis of pseudouridine from uracil
BNEFENCH_01081	4.86e-259	apbE	2.7.1.180	-	H	ko:K03734	-	ko00000,ko01000	Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
BNEFENCH_01082	5.06e-145	cutC	-	-	P	ko:K06201	-	ko00000	Participates in the control of copper homeostasis
BNEFENCH_01083	1.09e-183	uppP	3.6.1.27	-	V	ko:K06153	ko00550,map00550	ko00000,ko00001,ko01000,ko01011	Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
BNEFENCH_01084	1.72e-242	-	-	-	L	ko:K07482	-	ko00000	PFAM Integrase, catalytic core
BNEFENCH_01085	3.81e-253	pgl	3.1.1.31	-	G	ko:K07404	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Lactonase, 7-bladed beta-propeller
BNEFENCH_01086	2e-82	srlB	2.7.1.198	-	G	ko:K02781	ko00051,ko02060,map00051,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system glucitol/sorbitol-specific IIA component
BNEFENCH_01087	4.12e-56	rpsN	-	-	J	ko:K02954	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
BNEFENCH_01088	4.94e-245	guaC	1.7.1.7	-	F	ko:K00364	ko00230,map00230	ko00000,ko00001,ko01000	Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
BNEFENCH_01089	1.94e-219	corA	-	-	P	ko:K03284	-	ko00000,ko02000	CorA-like Mg2+ transporter protein
BNEFENCH_01090	4.68e-198	rrmA	2.1.1.187	-	H	ko:K00563,ko:K10947	-	ko00000,ko01000,ko03000,ko03009	Methyltransferase
BNEFENCH_01091	3.21e-125	cspR	2.1.1.207	-	J	ko:K03216	-	ko00000,ko01000,ko03016	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
BNEFENCH_01092	4.04e-94	-	-	-	S	-	-	-	Protein of unknown function (DUF1149)
BNEFENCH_01093	0.0	ftsK	-	-	D	ko:K03466	-	ko00000,ko03036	Belongs to the FtsK SpoIIIE SftA family
BNEFENCH_01094	1.1e-294	ymfF	-	-	S	-	-	-	Peptidase M16 inactive domain protein
BNEFENCH_01095	3.24e-308	ymfH	-	-	S	-	-	-	Peptidase M16
BNEFENCH_01096	3.01e-166	fabG	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Enoyl-(Acyl carrier protein) reductase
BNEFENCH_01097	4.66e-169	ymfM	-	-	S	ko:K15539	-	ko00000	Helix-turn-helix domain
BNEFENCH_01098	2.85e-135	pgsA	2.7.8.5	-	I	ko:K00995	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
BNEFENCH_01099	5.21e-294	cinA	3.5.1.42	-	S	ko:K03742,ko:K03743	ko00760,map00760	ko00000,ko00001,ko01000	Belongs to the CinA family
BNEFENCH_01100	8.81e-242	recA	-	-	L	ko:K03553	ko03440,map03440	ko00000,ko00001,ko00002,ko03400	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
BNEFENCH_01101	7.95e-317	rny	-	-	S	ko:K18682	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	Endoribonuclease that initiates mRNA decay
BNEFENCH_01102	4.86e-150	yvyE	3.4.13.9	-	S	ko:K01271	-	ko00000,ko01000,ko01002	YigZ family
BNEFENCH_01103	4.32e-297	comFA	-	-	L	ko:K02240	-	ko00000,ko00002,ko02044	Helicase C-terminal domain protein
BNEFENCH_01104	4.32e-104	comFC	-	-	S	ko:K02242	-	ko00000,ko00002,ko02044	Competence protein
BNEFENCH_01105	3.24e-126	hpf	-	-	J	ko:K05808	-	ko00000,ko03009	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
BNEFENCH_01106	0.0	secA	-	-	U	ko:K03070	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
BNEFENCH_01107	8.69e-239	prfB	-	-	J	ko:K02836	-	ko00000,ko03012	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
BNEFENCH_01108	1.28e-160	ftsE	-	-	D	ko:K09812	ko02010,map02010	ko00000,ko00001,ko00002,ko02000,ko03036	ABC transporter
BNEFENCH_01110	7.77e-259	minJ	-	-	O	-	-	-	Domain present in PSD-95, Dlg, and ZO-1/2.
BNEFENCH_01111	1.83e-168	phoP	-	-	K	ko:K07658	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	response regulator
BNEFENCH_01112	0.0	phoR	2.7.13.3	-	T	ko:K07636	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
BNEFENCH_01113	1.76e-196	pstS	-	-	P	ko:K02040	ko02010,ko02020,ko05152,map02010,map02020,map05152	ko00000,ko00001,ko00002,ko02000	Phosphate
BNEFENCH_01114	4.48e-205	pstC	-	-	P	ko:K02037	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	probably responsible for the translocation of the substrate across the membrane
BNEFENCH_01115	1.06e-201	pstA	-	-	P	ko:K02038	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Phosphate transport system permease protein PstA
BNEFENCH_01116	9.06e-192	pstB2	3.6.3.27	-	P	ko:K02036	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
BNEFENCH_01117	3.54e-180	pstB1	3.6.3.27	-	P	ko:K02036	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
BNEFENCH_01118	3.82e-156	phoU	-	-	P	ko:K02039	-	ko00000	Plays a role in the regulation of phosphate uptake
BNEFENCH_01119	0.0	yvlB	-	-	S	-	-	-	Putative adhesin
BNEFENCH_01120	7.43e-50	-	-	-	-	-	-	-	-
BNEFENCH_01121	2.99e-57	yvlD	-	-	S	ko:K08972	-	ko00000	Mycobacterial 4 TMS phage holin, superfamily IV
BNEFENCH_01122	8.27e-223	hprK	-	-	F	ko:K06023	-	ko00000,ko01000	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
BNEFENCH_01123	7.94e-202	lgt	-	-	M	ko:K13292	-	ko00000,ko01000	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
BNEFENCH_01124	1.8e-249	gpsA	1.1.1.94	-	I	ko:K00057	ko00564,ko01110,map00564,map01110	ko00000,ko00001,ko01000	Glycerol-3-phosphate dehydrogenase
BNEFENCH_01125	1.43e-226	trxB	1.8.1.9	-	C	ko:K00384	ko00450,map00450	ko00000,ko00001,ko01000	Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
BNEFENCH_01126	0.0	pgm	5.4.2.2	-	G	ko:K01835	ko00010,ko00030,ko00052,ko00230,ko00500,ko00520,ko00521,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00052,map00230,map00500,map00520,map00521,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
BNEFENCH_01127	5.25e-147	-	-	-	T	-	-	-	Transcriptional regulatory protein, C terminal
BNEFENCH_01128	4.73e-215	-	-	-	T	-	-	-	His Kinase A (phosphoacceptor) domain
BNEFENCH_01129	1.47e-118	-	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter
BNEFENCH_01130	0.0	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	FtsX-like permease family
BNEFENCH_01131	3.5e-138	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	FtsX-like permease family
BNEFENCH_01132	1.99e-153	yfbR	-	-	S	ko:K07023	-	ko00000	HD containing hydrolase-like enzyme
BNEFENCH_01133	0.0	uvrB	-	-	L	ko:K03702	ko03420,map03420	ko00000,ko00001,ko03400	damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
BNEFENCH_01134	0.0	uvrA	-	-	L	ko:K03701	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
BNEFENCH_01135	2.56e-111	-	-	-	S	-	-	-	Short repeat of unknown function (DUF308)
BNEFENCH_01136	8.53e-213	yvcJ	-	-	S	ko:K06958	-	ko00000,ko03019	Displays ATPase and GTPase activities
BNEFENCH_01137	2.99e-248	yvcK	-	-	S	-	-	-	Required for morphogenesis under gluconeogenic growth conditions
BNEFENCH_01138	9.63e-220	whiA	-	-	K	ko:K09762	-	ko00000	May be required for sporulation
BNEFENCH_01139	7.84e-106	ohrR	-	-	K	ko:K18906	-	ko00000,ko00002,ko01504,ko03000	helix_turn_helix multiple antibiotic resistance protein
BNEFENCH_01140	5.97e-132	clpP	3.4.21.92	-	O	ko:K01358	ko04112,ko04212,map04112,map04212	ko00000,ko00001,ko01000,ko01002	Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
BNEFENCH_01143	5.52e-241	cggR	-	-	K	ko:K05311	-	ko00000,ko03000	Putative sugar-binding domain
BNEFENCH_01144	2.1e-247	gap	1.2.1.12	-	G	ko:K00134	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
BNEFENCH_01145	2.16e-282	pgk	2.7.2.3	-	F	ko:K00927	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the phosphoglycerate kinase family
BNEFENCH_01146	2.81e-180	tpiA	5.3.1.1	-	G	ko:K01803	ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
BNEFENCH_01147	2.05e-313	eno	4.2.1.11	-	G	ko:K01689	ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066	ko00000,ko00001,ko00002,ko01000,ko03019,ko04147	Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
BNEFENCH_01148	1.74e-291	mdt(A)	-	-	EGP	ko:K08217	-	br01600,ko00000,ko01504,ko02000	Transmembrane secretion effector
BNEFENCH_01149	3.66e-61	-	-	-	-	-	-	-	-
BNEFENCH_01150	0.0	eriC	-	-	P	ko:K03281	-	ko00000	chloride
BNEFENCH_01151	5.04e-43	secG	-	-	U	ko:K03075	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Preprotein translocase
BNEFENCH_01152	4.01e-181	est	3.1.1.1	-	S	ko:K03928	-	ko00000,ko01000	Serine aminopeptidase, S33
BNEFENCH_01153	0.0	rnr	-	-	J	ko:K12573	ko03018,map03018	ko00000,ko00001,ko01000,ko03016,ko03019	3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
BNEFENCH_01154	4.47e-108	smpB	-	-	J	ko:K03664	-	ko00000	the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
BNEFENCH_01155	2.69e-227	yvdE	-	-	K	-	-	-	helix_turn _helix lactose operon repressor
BNEFENCH_01156	0.0	malA1	3.2.1.10, 3.2.1.20	GH13,GH31	G	ko:K01182,ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Alpha amylase, catalytic domain
BNEFENCH_01157	0.0	nplT	3.2.1.133, 3.2.1.135, 3.2.1.54	GH13	G	ko:K01208	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 13 family
BNEFENCH_01158	0.0	mapA	2.4.1.8	GH65	G	ko:K00691	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	hydrolase, family 65, central catalytic
BNEFENCH_01159	2.02e-154	-	5.4.2.6	-	S	ko:K01838	ko00500,map00500	ko00000,ko00001,ko01000	Haloacid dehalogenase-like hydrolase
BNEFENCH_01160	1e-21	msmX	-	-	P	ko:K10112	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
BNEFENCH_01161	7.87e-16	msmX	-	-	P	ko:K10112	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
BNEFENCH_01162	2.33e-23	-	-	-	-	-	-	-	-
BNEFENCH_01163	1.13e-32	-	-	-	K	ko:K07729	-	ko00000,ko03000	Helix-turn-helix XRE-family like proteins
BNEFENCH_01164	1.25e-306	YSH1	-	-	S	ko:K12574	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	Metallo-beta-lactamase superfamily
BNEFENCH_01165	8.67e-312	-	-	-	G	ko:K02027	-	ko00000,ko00002,ko02000	Bacterial extracellular solute-binding protein
BNEFENCH_01166	1.1e-188	malF	-	-	G	ko:K02026	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
BNEFENCH_01167	7.01e-213	-	-	-	P	ko:K02025	-	ko00000,ko00002,ko02000	ABC-type sugar transport systems, permease components
BNEFENCH_01168	3.08e-248	malK	-	-	P	ko:K10112,ko:K17240	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ATPases associated with a variety of cellular activities
BNEFENCH_01169	1.21e-134	-	-	-	K	ko:K06977	-	ko00000	Acetyltransferase (GNAT) domain
BNEFENCH_01170	7.57e-119	-	-	-	-	-	-	-	-
BNEFENCH_01171	4e-203	ycsE	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
BNEFENCH_01172	1.45e-166	ung	3.2.2.27	-	L	ko:K03648	ko03410,ko05340,map03410,map05340	ko00000,ko00001,ko01000,ko03400	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
BNEFENCH_01173	1.75e-227	pta	2.3.1.8, 3.6.3.21	-	C	ko:K00625,ko:K02028	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000,ko02000	phosphate acetyltransferase
BNEFENCH_01174	3.18e-106	ydiB	-	-	O	ko:K06925	-	ko00000,ko03016	Hydrolase, P-loop family
BNEFENCH_01176	1.71e-209	ysdB	-	-	S	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
BNEFENCH_01177	2.34e-271	ysdA	-	-	CP	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 family transporter protein
BNEFENCH_01178	4.66e-128	dnaQ	2.7.7.7	-	L	ko:K02342	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III
BNEFENCH_01179	4.71e-193	exoA	3.1.11.2	-	L	ko:K01142	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	exodeoxyribonuclease III
BNEFENCH_01180	4.74e-213	murB	1.3.1.98	-	M	ko:K00075	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation
BNEFENCH_01181	0.0	yvgP	-	-	P	ko:K03316	-	ko00000	Sodium proton antiporter
BNEFENCH_01182	1.97e-124	-	-	-	K	-	-	-	Cupin domain
BNEFENCH_01183	9.1e-263	potA	3.6.3.30, 3.6.3.31	-	P	ko:K02010,ko:K11072	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
BNEFENCH_01184	1.44e-189	potB	-	-	P	ko:K11071	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
BNEFENCH_01185	5.82e-187	potC	-	-	P	ko:K11070	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
BNEFENCH_01186	8.49e-267	potD	-	-	P	ko:K11069	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
BNEFENCH_01188	0.0	pacL	-	-	P	-	-	-	Cation transporter/ATPase, N-terminus
BNEFENCH_01189	2.42e-144	-	-	-	K	-	-	-	Transcriptional regulator
BNEFENCH_01190	3.98e-242	-	-	-	V	ko:K01992	-	ko00000,ko00002,ko02000	ABC transporter
BNEFENCH_01191	1.09e-169	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	AAA domain, putative AbiEii toxin, Type IV TA system
BNEFENCH_01192	3.82e-195	dacA	2.7.7.85	-	S	ko:K18672	-	ko00000,ko01000	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
BNEFENCH_01193	6.44e-216	ybbR	-	-	S	-	-	-	YbbR-like protein
BNEFENCH_01194	0.0	glmM	5.4.2.10	-	G	ko:K03431	ko00520,ko01100,ko01130,map00520,map01100,map01130	ko00000,ko00001,ko01000	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
BNEFENCH_01195	0.0	glmS	2.6.1.16	-	M	ko:K00820	ko00250,ko00520,ko01100,ko01130,ko04931,map00250,map00520,map01100,map01130,map04931	ko00000,ko00001,ko01000,ko01002	Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
BNEFENCH_01197	0.0	pepF2	-	-	E	-	-	-	Oligopeptidase F
BNEFENCH_01198	3.35e-106	-	-	-	S	-	-	-	VanZ like family
BNEFENCH_01199	5.85e-169	yebC	-	-	K	-	-	-	Transcriptional regulatory protein
BNEFENCH_01200	1.02e-196	comGA	-	-	NU	ko:K02243	-	ko00000,ko00002,ko02044	Type II IV secretion system protein
BNEFENCH_01201	1.55e-69	comGB	-	-	NU	ko:K02244	-	ko00000,ko00002,ko02044	type II secretion system
BNEFENCH_01202	8.04e-118	comGB	-	-	NU	ko:K02244	-	ko00000,ko00002,ko02044	type II secretion system
BNEFENCH_01203	1e-35	-	-	-	-	ko:K02245	-	ko00000,ko00002,ko02044	-
BNEFENCH_01205	1.56e-30	-	-	-	-	-	-	-	-
BNEFENCH_01206	2.01e-24	-	-	-	-	ko:K02248	-	ko00000,ko00002,ko02044	-
BNEFENCH_01208	3.06e-238	ytxK	2.1.1.72	-	L	ko:K00571	-	ko00000,ko01000,ko02048	N-6 DNA Methylase
BNEFENCH_01210	8.54e-81	-	-	-	-	-	-	-	-
BNEFENCH_01211	0.0	cycA	-	-	E	ko:K03293,ko:K11737	-	ko00000,ko02000	Amino acid permease
BNEFENCH_01212	7.51e-191	arbV	-	-	I	-	-	-	Phosphate acyltransferases
BNEFENCH_01213	8.22e-212	arbx	-	-	M	-	-	-	Glycosyl transferase family 8
BNEFENCH_01214	1.63e-233	arbY	-	-	M	-	-	-	family 8
BNEFENCH_01215	2.18e-212	arbZ	-	-	I	-	-	-	Phosphate acyltransferases
BNEFENCH_01216	0.0	rafA	3.2.1.22	-	G	ko:K07407	ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603	ko00000,ko00001,ko01000	alpha-galactosidase
BNEFENCH_01219	6.55e-93	-	-	-	S	-	-	-	SdpI/YhfL protein family
BNEFENCH_01220	3.55e-174	yclJ	-	-	K	ko:K02483	-	ko00000,ko02022	response regulator
BNEFENCH_01221	0.0	yclK	-	-	T	-	-	-	Histidine kinase
BNEFENCH_01222	1.56e-95	-	-	-	S	-	-	-	acetyltransferase
BNEFENCH_01223	5.2e-20	-	-	-	-	-	-	-	-
BNEFENCH_01224	7.36e-94	pheB	5.4.99.5	-	S	ko:K06209	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the UPF0735 family
BNEFENCH_01225	1.53e-88	-	-	-	-	-	-	-	-
BNEFENCH_01226	8.56e-74	-	-	-	-	-	-	-	-
BNEFENCH_01227	0.0	polYB	2.7.7.7	-	L	ko:K02346,ko:K03502	-	ko00000,ko01000,ko03400	Belongs to the DNA polymerase type-Y family
BNEFENCH_01229	4.19e-265	tcaA	-	-	S	ko:K21463	-	ko00000	response to antibiotic
BNEFENCH_01230	8.27e-179	-	3.1.1.5	-	E	ko:K10804	ko01040,map01040	ko00000,ko00001,ko01000,ko01004	GDSL-like Lipase/Acylhydrolase
BNEFENCH_01231	5.81e-35	-	-	-	S	-	-	-	Bacterial protein of unknown function (DUF898)
BNEFENCH_01233	0.0	pcrA	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	ATP-dependent DNA helicase
BNEFENCH_01234	0.0	ligA	6.5.1.2	-	L	ko:K01972	ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430	ko00000,ko00001,ko01000,ko03032,ko03400	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
BNEFENCH_01235	4.26e-271	camS	-	-	S	-	-	-	sex pheromone
BNEFENCH_01236	3.61e-61	gatC	6.3.5.6, 6.3.5.7	-	J	ko:K02435	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
BNEFENCH_01237	0.0	gatA	6.3.5.6, 6.3.5.7	-	J	ko:K02433	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
BNEFENCH_01238	0.0	gatB	6.3.5.6, 6.3.5.7	-	J	ko:K02434	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
BNEFENCH_01239	1.66e-246	dagK	2.7.1.107	-	G	ko:K07029	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko01000	Lipid kinase
BNEFENCH_01240	0.0	rumA_2	2.1.1.190	-	J	ko:K03215	-	ko00000,ko01000,ko03009	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
BNEFENCH_01241	1.53e-279	yttB	-	-	EGP	-	-	-	Major Facilitator
BNEFENCH_01242	2.53e-190	-	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
BNEFENCH_01243	1.72e-210	-	-	-	S	-	-	-	Polyphosphate nucleotide phosphotransferase, PPK2 family
BNEFENCH_01244	0.0	pepO	-	-	O	ko:K07386	-	ko00000,ko01000,ko01002	Peptidase family M13
BNEFENCH_01245	0.0	-	-	-	EGP	-	-	-	Major Facilitator
BNEFENCH_01246	5.98e-105	-	-	-	K	-	-	-	Acetyltransferase (GNAT) family
BNEFENCH_01247	1.17e-212	yitS	-	-	S	-	-	-	Uncharacterised protein, DegV family COG1307
BNEFENCH_01248	1.37e-165	hflC	-	-	O	ko:K04087	-	ko00000,ko00002,ko01000	prohibitin homologues
BNEFENCH_01249	4.3e-40	-	-	-	-	-	-	-	-
BNEFENCH_01250	5.67e-177	-	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
BNEFENCH_01251	9.39e-80	-	-	-	S	-	-	-	Protein of unknown function (DUF1093)
BNEFENCH_01252	1.9e-79	-	-	-	S	-	-	-	Domain of unknown function (DUF4828)
BNEFENCH_01253	2.69e-227	mocA	-	-	S	-	-	-	Oxidoreductase
BNEFENCH_01254	1.47e-287	yfmL	-	-	L	-	-	-	DEAD DEAH box helicase
BNEFENCH_01255	7.9e-74	chbA	2.7.1.196, 2.7.1.205	-	G	ko:K02759	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphoenolpyruvate-dependent sugar phosphotransferase system
BNEFENCH_01256	4.49e-93	-	-	-	S	-	-	-	Domain of unknown function (DUF3284)
BNEFENCH_01258	1.04e-06	-	-	-	-	-	-	-	-
BNEFENCH_01259	0.0	recQ	3.6.4.12	-	L	ko:K03654	ko03018,map03018	ko00000,ko00001,ko01000,ko03400	ATP-dependent DNA helicase RecQ
BNEFENCH_01260	1.92e-304	pepS	-	-	E	ko:K19689	-	ko00000,ko01000,ko01002	Thermophilic metalloprotease (M29)
BNEFENCH_01261	2.96e-144	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
BNEFENCH_01262	0.0	-	-	-	S	ko:K13730	ko05100,map05100	ko00000,ko00001	Uncharacterized protein conserved in bacteria (DUF2252)
BNEFENCH_01263	9.73e-230	rbn	-	-	S	ko:K07058	-	ko00000	Belongs to the UPF0761 family
BNEFENCH_01264	1.24e-103	fld	-	-	C	ko:K03839	-	ko00000	Flavodoxin
BNEFENCH_01265	1.16e-204	map	3.4.11.18	-	E	ko:K01265	-	ko00000,ko01000,ko01002	Methionine Aminopeptidase
BNEFENCH_01266	3.04e-258	-	-	-	M	-	-	-	Glycosyltransferase like family 2
BNEFENCH_01268	1.02e-20	-	-	-	-	-	-	-	-
BNEFENCH_01269	1.09e-253	mvaK2	2.7.4.2	-	I	ko:K00938	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	phosphomevalonate kinase
BNEFENCH_01270	1.31e-216	galU	2.7.7.9	-	M	ko:K00963	ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	UTP-glucose-1-phosphate uridylyltransferase
BNEFENCH_01271	7.54e-61	-	-	-	M	-	-	-	NLP P60 protein
BNEFENCH_01272	4.88e-139	-	-	-	M	-	-	-	Glycosyl hydrolases family 25
BNEFENCH_01273	1.32e-74	-	-	-	M	-	-	-	O-Antigen ligase
BNEFENCH_01274	1.43e-98	-	-	-	M	-	-	-	Glycosyl transferases group 1
BNEFENCH_01275	7.04e-185	cps2I	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
BNEFENCH_01276	1.57e-123	-	-	-	M	-	-	-	group 2 family protein
BNEFENCH_01277	1.74e-153	-	4.2.1.46	-	GM	ko:K01710	ko00521,ko00523,ko00525,ko01055,ko01130,map00521,map00523,map00525,map01055,map01130	ko00000,ko00001,ko00002,ko01000	Male sterility protein
BNEFENCH_01278	6.19e-132	-	2.7.7.60	-	I	ko:K00991	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
BNEFENCH_01279	7.3e-147	licD3	-	-	M	ko:K07271	-	ko00000,ko01000	LicD family
BNEFENCH_01280	2.47e-106	wcaA	-	-	M	-	-	-	Glycosyl transferase family 2
BNEFENCH_01281	2.37e-250	cps2E	-	-	M	-	-	-	Bacterial sugar transferase
BNEFENCH_01282	2.12e-252	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
BNEFENCH_01284	2.87e-167	-	-	-	N	-	-	-	domain, Protein
BNEFENCH_01285	0.0	-	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
BNEFENCH_01286	0.0	bglH	-	-	G	ko:K02755,ko:K02756,ko:K02757	ko02060,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
BNEFENCH_01287	2.49e-191	licT2	-	-	K	ko:K03488	-	ko00000,ko03000	CAT RNA binding domain
BNEFENCH_01288	0.0	-	-	-	S	-	-	-	Bacterial membrane protein YfhO
BNEFENCH_01289	0.0	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
BNEFENCH_01290	1.36e-216	yfdH	-	GT2	M	ko:K12999	-	ko00000,ko01000,ko01003,ko01005	Glycosyltransferase, group 2 family protein
BNEFENCH_01291	7.34e-134	-	-	-	-	-	-	-	-
BNEFENCH_01292	8.49e-217	yqjA	-	-	S	-	-	-	Putative aromatic acid exporter C-terminal domain
BNEFENCH_01294	6.22e-43	cspC	-	-	K	ko:K03704	-	ko00000,ko03000	Cold shock protein
BNEFENCH_01295	3.95e-108	yvbK	-	-	K	-	-	-	GNAT family
BNEFENCH_01296	1.45e-149	acmA	3.2.1.17, 3.2.1.96	-	NU	ko:K01185,ko:K01227	ko00511,map00511	ko00000,ko00001,ko01000	mannosyl-glycoprotein
BNEFENCH_01297	2.27e-132	xpt	2.4.2.22	-	F	ko:K03816	ko00230,ko01100,ko01110,map00230,map01100,map01110	ko00000,ko00001,ko01000	Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
BNEFENCH_01298	2.96e-301	pbuX	-	-	F	ko:K03458,ko:K16169	-	ko00000,ko02000	xanthine permease
BNEFENCH_01299	6.67e-261	purK2	6.3.4.18	-	F	ko:K01589	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
BNEFENCH_01300	9.74e-315	purB	4.3.2.2	-	F	ko:K01756	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
BNEFENCH_01301	7.65e-136	-	-	-	-	-	-	-	-
BNEFENCH_01302	6.04e-137	-	-	-	-	-	-	-	-
BNEFENCH_01303	0.0	ltaS	2.7.8.20	-	M	ko:K19005	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
BNEFENCH_01304	1.31e-142	vanZ	-	-	V	-	-	-	VanZ like family
BNEFENCH_01305	4.66e-196	glcU	-	-	U	ko:K05340	-	ko00000,ko02000	sugar transport
BNEFENCH_01306	0.0	pgi	5.3.1.9	-	G	ko:K01810	ko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the GPI family
BNEFENCH_01307	6e-288	-	-	-	L	-	-	-	Pfam:Integrase_AP2
BNEFENCH_01310	4.34e-41	-	-	-	-	-	-	-	-
BNEFENCH_01311	5.03e-95	-	-	-	S	-	-	-	Pyridoxamine 5'-phosphate oxidase
BNEFENCH_01314	2.32e-145	-	-	-	S	-	-	-	Domain of Unknown Function with PDB structure (DUF3862)
BNEFENCH_01316	7.07e-32	-	-	-	S	-	-	-	sequence-specific DNA binding
BNEFENCH_01317	2.02e-14	-	-	-	K	-	-	-	Helix-turn-helix domain
BNEFENCH_01321	4.28e-125	-	-	-	-	-	-	-	-
BNEFENCH_01323	4.2e-22	-	-	-	-	-	-	-	-
BNEFENCH_01326	4.16e-200	recT	-	-	L	ko:K07455	-	ko00000,ko03400	RecT family
BNEFENCH_01327	1.59e-191	pi112	-	-	L	-	-	-	PDDEXK-like domain of unknown function (DUF3799)
BNEFENCH_01328	1.13e-205	-	-	-	L	-	-	-	Replication initiation and membrane attachment
BNEFENCH_01330	1.29e-83	-	-	-	S	-	-	-	Hypothetical protein (DUF2513)
BNEFENCH_01332	3.53e-08	-	-	-	K	-	-	-	Cro/C1-type HTH DNA-binding domain
BNEFENCH_01333	1.64e-88	-	-	-	-	-	-	-	-
BNEFENCH_01334	6.88e-75	-	-	-	S	-	-	-	Protein of unknown function (DUF1064)
BNEFENCH_01335	1.21e-36	-	-	-	-	-	-	-	-
BNEFENCH_01338	2.53e-88	-	-	-	S	-	-	-	Protein of unknown function (DUF1642)
BNEFENCH_01340	2.25e-28	-	-	-	-	-	-	-	-
BNEFENCH_01342	5.65e-25	-	-	-	-	-	-	-	-
BNEFENCH_01344	1.13e-48	-	-	-	S	-	-	-	YopX protein
BNEFENCH_01346	1.7e-67	-	-	-	-	-	-	-	-
BNEFENCH_01347	7.95e-60	-	-	-	-	-	-	-	-
BNEFENCH_01348	3.87e-18	-	-	-	-	-	-	-	-
BNEFENCH_01349	5.29e-285	-	-	-	S	-	-	-	GcrA cell cycle regulator
BNEFENCH_01350	1.19e-67	-	-	-	-	-	-	-	-
BNEFENCH_01351	4.36e-120	-	-	-	L	ko:K07474	-	ko00000	Terminase small subunit
BNEFENCH_01352	4.59e-315	-	-	-	S	-	-	-	Terminase-like family
BNEFENCH_01353	0.0	-	-	-	S	-	-	-	Phage portal protein
BNEFENCH_01354	2.3e-230	-	-	-	S	-	-	-	head morphogenesis protein, SPP1 gp7 family
BNEFENCH_01355	6.1e-110	-	-	-	S	-	-	-	Domain of unknown function (DUF4355)
BNEFENCH_01356	2.99e-65	-	-	-	-	-	-	-	-
BNEFENCH_01357	1.44e-237	-	-	-	S	-	-	-	Phage major capsid protein E
BNEFENCH_01358	3.88e-75	-	-	-	S	-	-	-	Phage gp6-like head-tail connector protein
BNEFENCH_01359	2.71e-66	-	-	-	-	-	-	-	-
BNEFENCH_01360	1e-71	-	-	-	S	-	-	-	Bacteriophage HK97-gp10, putative tail-component
BNEFENCH_01361	4.75e-92	-	-	-	S	-	-	-	Protein of unknown function (DUF3168)
BNEFENCH_01362	4.68e-131	-	-	-	S	-	-	-	Phage tail tube protein
BNEFENCH_01363	6.85e-67	-	-	-	S	-	-	-	Phage tail assembly chaperone protein, TAC
BNEFENCH_01364	1.57e-73	-	-	-	-	-	-	-	-
BNEFENCH_01365	0.0	-	-	-	S	-	-	-	phage tail tape measure protein
BNEFENCH_01366	1.04e-302	-	-	-	S	-	-	-	Phage tail protein
BNEFENCH_01367	0.0	-	-	-	S	-	-	-	peptidoglycan catabolic process
BNEFENCH_01369	1.57e-69	-	-	-	-	-	-	-	-
BNEFENCH_01370	2.88e-62	hol	-	-	S	-	-	-	Bacteriophage holin
BNEFENCH_01371	3.77e-246	-	3.5.1.28	-	M	ko:K01447	-	ko00000,ko01000	N-acetylmuramoyl-L-alanine amidase
BNEFENCH_01373	1.11e-206	-	-	-	-	-	-	-	-
BNEFENCH_01374	1.26e-79	-	-	-	S	-	-	-	Domain of unknown function DUF1829
BNEFENCH_01375	4.53e-64	-	-	-	S	-	-	-	Domain of unknown function DUF1829
BNEFENCH_01376	2.12e-63	ycnE	-	-	S	-	-	-	Antibiotic biosynthesis monooxygenase
BNEFENCH_01378	4.65e-195	-	-	-	F	ko:K15051	-	ko00000	DNA/RNA non-specific endonuclease
BNEFENCH_01379	2.73e-71	-	-	-	S	-	-	-	Pfam Transposase IS66
BNEFENCH_01380	2.76e-294	-	-	GT2,GT4	M	ko:K20444	-	ko00000,ko01000,ko01005,ko02000	Glycosyl transferases group 1
BNEFENCH_01381	3.64e-219	ysjB	-	-	S	ko:K03810	-	ko00000	Oxidoreductase family, NAD-binding Rossmann fold
BNEFENCH_01382	5.68e-110	guaD	-	-	FJ	-	-	-	MafB19-like deaminase
BNEFENCH_01384	2.11e-103	tspO	-	-	T	ko:K05770	ko04080,ko04214,ko04979,ko05166,map04080,map04214,map04979,map05166	ko00000,ko00001,ko02000	TspO/MBR family
BNEFENCH_01385	1.53e-19	-	-	-	-	-	-	-	-
BNEFENCH_01386	4.42e-271	yttB	-	-	EGP	-	-	-	Major Facilitator
BNEFENCH_01387	4.36e-136	-	-	-	S	-	-	-	Protein of unknown function (DUF1211)
BNEFENCH_01388	0.0	pepD2	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
BNEFENCH_01391	4.1e-163	pgm7	-	-	G	-	-	-	Phosphoglycerate mutase family
BNEFENCH_01392	2.61e-154	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
BNEFENCH_01393	0.0	ycfI	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter, ATP-binding protein
BNEFENCH_01394	0.0	yfiC	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter
BNEFENCH_01395	1.75e-179	-	-	-	S	-	-	-	NADPH-dependent FMN reductase
BNEFENCH_01396	1.31e-208	catE	1.13.11.2	-	S	ko:K07104	ko00361,ko00362,ko00622,ko00643,ko01100,ko01120,ko01220,map00361,map00362,map00622,map00643,map01100,map01120,map01220	ko00000,ko00001,ko00002,ko01000	glyoxalase
BNEFENCH_01397	9.13e-252	ampC	-	-	V	-	-	-	Beta-lactamase
BNEFENCH_01398	0.0	murE2	6.3.2.13	-	M	ko:K01928	ko00300,ko00550,map00300,map00550	ko00000,ko00001,ko01000,ko01011	Domain of unknown function (DUF1727)
BNEFENCH_01399	4.41e-143	tdk	2.7.1.21	-	F	ko:K00857	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	thymidine kinase
BNEFENCH_01400	3.51e-251	prfA	-	-	J	ko:K02835	-	ko00000,ko03012	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
BNEFENCH_01401	3.85e-195	prmC	2.1.1.297	-	J	ko:K02493	-	ko00000,ko01000,ko03012	Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
BNEFENCH_01402	9.87e-238	ywlC	2.7.7.87	-	J	ko:K07566	-	ko00000,ko01000,ko03009,ko03016	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
BNEFENCH_01403	4.49e-298	glyA	2.1.2.1	-	E	ko:K00600	ko00260,ko00460,ko00630,ko00670,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko01523,map00260,map00460,map00630,map00670,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map01523	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
BNEFENCH_01404	3.05e-145	upp	2.4.2.9	-	F	ko:K00761	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
BNEFENCH_01405	1.23e-162	atpB	-	-	C	ko:K02108	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko03110	it plays a direct role in the translocation of protons across the membrane
BNEFENCH_01406	2.57e-37	atpE	-	-	C	ko:K02110	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
BNEFENCH_01407	1.13e-83	atpF	-	-	C	ko:K02109	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
BNEFENCH_01408	4.59e-115	atpH	-	-	C	ko:K02113	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
BNEFENCH_01409	0.0	atpA	3.6.3.14	-	C	ko:K02111	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko01000	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
BNEFENCH_01410	1.92e-211	atpG	-	-	C	ko:K02115	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
BNEFENCH_01411	0.0	atpD	3.6.3.14	-	C	ko:K02112	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko01000	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
BNEFENCH_01412	1.88e-91	atpC	-	-	C	ko:K02114	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Produces ATP from ADP in the presence of a proton gradient across the membrane
BNEFENCH_01413	8.38e-42	-	-	-	S	-	-	-	Protein of unknown function (DUF1146)
BNEFENCH_01414	4.12e-228	mbl	-	-	D	ko:K03569	-	ko00000,ko02048,ko03036,ko04812	Cell shape determining protein MreB Mrl
BNEFENCH_01415	1.37e-26	-	-	-	S	-	-	-	DNA-directed RNA polymerase subunit beta
BNEFENCH_01416	1.14e-72	ytjA	-	-	S	ko:K08998	-	ko00000	Could be involved in insertion of integral membrane proteins into the membrane
BNEFENCH_01417	8.37e-42	-	-	-	S	-	-	-	Protein of unknown function (DUF2969)
BNEFENCH_01418	1.41e-285	rodA	-	-	D	ko:K05837	-	ko00000,ko03036	Belongs to the SEDS family
BNEFENCH_01419	4.19e-65	gcsH2	-	-	E	ko:K02437	ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200	ko00000,ko00001,ko00002	glycine cleavage
BNEFENCH_01420	1.3e-283	-	3.5.1.18	-	E	ko:K01439	ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000	succinyl-diaminopimelate desuccinylase
BNEFENCH_01421	2.67e-186	-	-	-	P	ko:K02073	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the nlpA lipoprotein family
BNEFENCH_01423	8.04e-192	-	-	-	P	ko:K02073	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the nlpA lipoprotein family
BNEFENCH_01424	2.09e-243	metN	-	-	P	ko:K02071	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
BNEFENCH_01425	1.31e-149	metI	-	-	P	ko:K02072	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
BNEFENCH_01426	4.15e-184	sufC	-	-	O	ko:K09013	-	ko00000,ko02000	FeS assembly ATPase SufC
BNEFENCH_01427	3.88e-243	sufD	-	-	O	ko:K07033,ko:K09015	-	ko00000	FeS assembly protein SufD
BNEFENCH_01428	4e-279	sufS	2.8.1.7, 4.4.1.16	-	E	ko:K11717	ko00450,ko01100,map00450,map01100	ko00000,ko00001,ko01000	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
BNEFENCH_01429	2.01e-102	nifU	-	-	C	ko:K04488	-	ko00000	SUF system FeS assembly protein, NifU family
BNEFENCH_01430	0.0	sufB	-	-	O	ko:K07033,ko:K09014	-	ko00000	assembly protein SufB
BNEFENCH_01431	4.73e-31	-	-	-	-	-	-	-	-
BNEFENCH_01432	9.85e-88	-	-	-	S	-	-	-	Protein of unknown function (DUF1694)
BNEFENCH_01433	3.03e-231	-	-	-	S	-	-	-	Protein of unknown function (DUF2785)
BNEFENCH_01434	1.06e-149	yhfA	-	-	S	-	-	-	HAD hydrolase, family IA, variant 3
BNEFENCH_01435	2.7e-200	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
BNEFENCH_01436	2.86e-108	uspA	-	-	T	-	-	-	universal stress protein
BNEFENCH_01437	1.65e-52	-	-	-	-	-	-	-	-
BNEFENCH_01438	3.91e-305	rarA	-	-	L	ko:K07478	-	ko00000	recombination factor protein RarA
BNEFENCH_01439	0.0	gshAB	6.3.2.2	-	H	ko:K01919	ko00270,ko00480,ko01100,map00270,map00480,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the glutamate--cysteine ligase type 1 family
BNEFENCH_01440	2.76e-99	XK27_05190	-	-	S	-	-	-	Protein of unknown function (DUF1694)
BNEFENCH_01441	2.85e-141	yktB	-	-	S	-	-	-	Belongs to the UPF0637 family
BNEFENCH_01442	1.02e-158	sdaAB	4.3.1.17	-	E	ko:K01752	ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230	ko00000,ko00001,ko01000	Serine dehydratase beta chain
BNEFENCH_01443	4.62e-193	sdaAA	4.3.1.17	-	E	ko:K01752	ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230	ko00000,ko00001,ko01000	L-serine dehydratase, iron-sulfur-dependent, alpha subunit
BNEFENCH_01444	1.89e-157	-	-	-	G	-	-	-	alpha-ribazole phosphatase activity
BNEFENCH_01445	1.63e-196	mrsA1	1.8.4.11	-	O	ko:K07304	-	ko00000,ko01000	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
BNEFENCH_01446	2.87e-219	-	-	-	IQ	-	-	-	NAD dependent epimerase/dehydratase family
BNEFENCH_01447	4.16e-178	pnuC	-	-	H	ko:K03811	-	ko00000,ko02000	nicotinamide mononucleotide transporter
BNEFENCH_01448	2.05e-173	-	-	-	F	-	-	-	deoxynucleoside kinase
BNEFENCH_01449	8.16e-203	hisK	3.1.3.15	-	E	ko:K04486	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Histidinol phosphatase and related hydrolases of the PHP family
BNEFENCH_01450	0.0	oppA	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
BNEFENCH_01451	1.44e-201	-	-	-	T	-	-	-	GHKL domain
BNEFENCH_01452	4.47e-155	-	-	-	T	-	-	-	Transcriptional regulatory protein, C terminal
BNEFENCH_01453	1.36e-216	bcrA	-	-	V	ko:K01990,ko:K19309	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	AAA domain, putative AbiEii toxin, Type IV TA system
BNEFENCH_01454	1.04e-141	-	-	-	S	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 family transporter protein
BNEFENCH_01455	3.86e-203	-	-	-	K	-	-	-	Transcriptional regulator
BNEFENCH_01456	7.79e-102	yphH	-	-	S	-	-	-	Cupin domain
BNEFENCH_01457	1.07e-72	yphJ	4.1.1.44	-	S	ko:K01607	ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220	ko00000,ko00001,ko01000	decarboxylase
BNEFENCH_01458	1.51e-146	-	-	-	GM	-	-	-	NAD(P)H-binding
BNEFENCH_01459	1.94e-54	-	-	-	K	-	-	-	helix_turn_helix, Arsenical Resistance Operon Repressor
BNEFENCH_01460	2.25e-156	gst	2.5.1.18	-	O	ko:K00799	ko00480,ko00980,ko00982,ko00983,ko01524,ko05200,ko05204,ko05225,ko05418,map00480,map00980,map00982,map00983,map01524,map05200,map05204,map05225,map05418	ko00000,ko00001,ko01000,ko02000	Glutathione S-transferase, C-terminal domain
BNEFENCH_01461	1.49e-137	-	-	-	K	-	-	-	Psort location Cytoplasmic, score
BNEFENCH_01462	8.9e-216	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
BNEFENCH_01463	3.03e-115	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
BNEFENCH_01464	5.34e-160	-	-	-	T	-	-	-	Histidine kinase
BNEFENCH_01465	2.65e-110	-	-	-	K	ko:K07720	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	helix_turn_helix, arabinose operon control protein
BNEFENCH_01466	3.72e-194	-	-	-	P	ko:K02012	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding protein
BNEFENCH_01467	1.71e-196	fbpC	3.6.3.30	-	P	ko:K02010	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	TOBE domain
BNEFENCH_01468	8.21e-314	sfuB	-	-	P	ko:K02011	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
BNEFENCH_01469	1.39e-197	degV	-	-	S	-	-	-	Uncharacterised protein, DegV family COG1307
BNEFENCH_01470	1.63e-132	desR	-	-	K	ko:K02479,ko:K07693	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	helix_turn_helix, Lux Regulon
BNEFENCH_01471	1.29e-192	desK	2.7.13.3	-	T	ko:K07778	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
BNEFENCH_01472	1.58e-121	XK27_09830	-	-	V	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 type transporter
BNEFENCH_01473	8.17e-156	yvfR	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter
BNEFENCH_01474	6.56e-274	-	-	-	-	-	-	-	-
BNEFENCH_01475	2.97e-86	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
BNEFENCH_01476	1.57e-62	-	-	-	S	-	-	-	Protein of unknown function (DUF2568)
BNEFENCH_01477	3.24e-36	-	-	-	S	-	-	-	Protein of unknown function C-terminus (DUF2399)
BNEFENCH_01478	3.43e-155	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
BNEFENCH_01479	1.23e-57	-	-	-	L	ko:K07473	-	ko00000,ko02048	RelB antitoxin
BNEFENCH_01480	8.76e-63	-	-	-	S	-	-	-	ParE toxin of type II toxin-antitoxin system, parDE
BNEFENCH_01482	0.0	tex	-	-	K	ko:K06959	-	ko00000	Tex-like protein N-terminal domain protein
BNEFENCH_01483	5.74e-69	-	-	-	-	-	-	-	-
BNEFENCH_01485	8.39e-26	-	-	-	L	ko:K07484	-	ko00000	Transposase IS66 family
BNEFENCH_01486	1.11e-167	-	-	-	L	ko:K07484	-	ko00000	Transposase IS66 family
BNEFENCH_01487	6.13e-47	-	-	-	L	-	-	-	Transposase IS66 family
BNEFENCH_01488	3.31e-60	-	-	-	L	-	-	-	Transposase IS66 family
BNEFENCH_01491	9.81e-59	-	-	-	L	ko:K07484	-	ko00000	IS66 Orf2 like protein
BNEFENCH_01493	4.33e-206	-	-	-	T	-	-	-	Nacht domain
BNEFENCH_01495	1.04e-88	-	-	-	K	-	-	-	Cro/C1-type HTH DNA-binding domain
BNEFENCH_01496	1.52e-142	rpsD	-	-	J	ko:K02986	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
BNEFENCH_01497	2.04e-110	yebR	1.8.4.14	-	T	ko:K08968	ko00270,map00270	ko00000,ko00001,ko01000	GAF domain-containing protein
BNEFENCH_01498	0.0	ezrA	-	-	D	ko:K06286	-	ko00000,ko03036	modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
BNEFENCH_01499	6.1e-272	iscS2	2.8.1.7	-	E	ko:K04487	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko02048,ko03016,ko03029	Aminotransferase class V
BNEFENCH_01500	4.95e-288	thiI	2.8.1.4	-	H	ko:K03151	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko03016	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
BNEFENCH_01501	1.24e-148	rex	-	-	K	ko:K01926	-	ko00000,ko03000	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
BNEFENCH_01502	0.0	valS	6.1.1.9	-	J	ko:K01873	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
BNEFENCH_01503	4.42e-308	folC	6.3.2.12, 6.3.2.17	-	H	ko:K11754	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the folylpolyglutamate synthase family
BNEFENCH_01504	1.98e-148	-	-	-	S	-	-	-	Haloacid dehalogenase-like hydrolase
BNEFENCH_01505	1.97e-152	radC	-	-	L	ko:K03630	-	ko00000	DNA repair protein
BNEFENCH_01506	2.78e-228	mreB	-	-	D	ko:K03569	-	ko00000,ko02048,ko03036,ko04812	cell shape determining protein MreB
BNEFENCH_01507	1.88e-191	mreC	-	-	M	ko:K03570	-	ko00000,ko03036	Involved in formation and maintenance of cell shape
BNEFENCH_01508	1.23e-112	mreD	-	-	M	ko:K03571	-	ko00000,ko03036	rod shape-determining protein MreD
BNEFENCH_01509	3.14e-147	minC	-	-	D	ko:K03610	-	ko00000,ko03036,ko04812	Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization
BNEFENCH_01510	8.63e-182	minD	-	-	D	ko:K03609	-	ko00000,ko03036,ko04812	Belongs to the ParA family
BNEFENCH_01511	4.79e-142	yecS_2	-	-	P	ko:K02029,ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter permease
BNEFENCH_01512	3.29e-146	glnQ	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	ABC transporter
BNEFENCH_01513	2.32e-193	aatB	-	-	ET	ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter substrate-binding protein
BNEFENCH_01514	0.0	cls	-	-	I	ko:K06131	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BNEFENCH_01515	7.11e-60	-	-	-	-	-	-	-	-
BNEFENCH_01516	1.61e-101	mraZ	-	-	K	ko:K03925	-	ko00000	Belongs to the MraZ family
BNEFENCH_01517	3.92e-218	rsmH	2.1.1.199	-	J	ko:K03438	-	ko00000,ko01000,ko03009	Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
BNEFENCH_01518	1.6e-68	ftsL	-	-	D	-	-	-	cell division protein FtsL
BNEFENCH_01519	0.0	pbpX	-	-	M	ko:K08724,ko:K12552,ko:K12556	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01011	Penicillin-binding Protein
BNEFENCH_01520	1.33e-230	mraY	2.7.8.13	-	M	ko:K01000	ko00550,ko01100,ko01502,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
BNEFENCH_01521	0.0	murD	6.3.2.9	-	M	ko:K01925	ko00471,ko00550,ko01100,map00471,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
BNEFENCH_01522	4e-259	murG	2.4.1.227	GT28	M	ko:K02563	ko00550,ko01100,ko01502,ko04112,map00550,map01100,map01502,map04112	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
BNEFENCH_01523	3.57e-201	divIB	-	-	D	ko:K03589	ko04112,map04112	ko00000,ko00001,ko03036	Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
BNEFENCH_01524	1.44e-311	ftsA	-	-	D	ko:K03590	ko04112,map04112	ko00000,ko00001,ko03036,ko04812	Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
BNEFENCH_01525	3.25e-291	ftsZ	-	-	D	ko:K03531	ko04112,map04112	ko00000,ko00001,ko02048,ko03036,ko04812	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
BNEFENCH_01526	7.24e-102	sepF	-	-	D	ko:K09772	-	ko00000,ko03036	Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
BNEFENCH_01527	5.58e-60	ylmG	-	-	S	ko:K02221	-	ko00000,ko02044	integral membrane protein
BNEFENCH_01528	1.45e-186	ylmH	-	-	S	-	-	-	S4 domain protein
BNEFENCH_01529	2.48e-116	divIVA	-	-	D	ko:K04074	-	ko00000,ko03036	DivIVA protein
BNEFENCH_01530	0.0	ileS	6.1.1.5	-	J	ko:K01870	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
BNEFENCH_01531	4.62e-48	cspB	-	-	K	ko:K03704	-	ko00000,ko03000	Cold shock protein
BNEFENCH_01532	5.93e-207	pstS	-	-	P	ko:K02040	ko02010,ko02020,ko05152,map02010,map02020,map05152	ko00000,ko00001,ko00002,ko02000	Phosphate
BNEFENCH_01533	0.0	ydiC1	-	-	EGP	-	-	-	Major Facilitator
BNEFENCH_01534	7.29e-270	yaaN	-	-	P	-	-	-	Toxic anion resistance protein (TelA)
BNEFENCH_01535	5.42e-149	-	-	-	S	-	-	-	5-bromo-4-chloroindolyl phosphate hydrolysis protein
BNEFENCH_01536	3.69e-124	nudF	3.6.1.13	-	L	ko:K01515	ko00230,map00230	ko00000,ko00001,ko01000	ADP-ribose pyrophosphatase
BNEFENCH_01537	2.45e-40	-	-	-	-	-	-	-	-
BNEFENCH_01538	1.95e-159	mtnN	3.2.2.9	-	E	ko:K01243	ko00270,ko01100,ko01230,map00270,map01100,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
BNEFENCH_01539	2.81e-278	iscS	2.8.1.7	-	E	ko:K04487	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko02048,ko03016,ko03029	Aminotransferase class V
BNEFENCH_01540	2.45e-75	XK27_04120	-	-	S	-	-	-	Putative amino acid metabolism
BNEFENCH_01541	0.0	uvrA2	-	-	L	-	-	-	ABC transporter
BNEFENCH_01542	0.0	mnmA	2.8.1.13	-	J	ko:K00566	ko04122,map04122	ko00000,ko00001,ko01000,ko03016	Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
BNEFENCH_01543	4.69e-159	pgm6	-	-	G	-	-	-	phosphoglycerate mutase
BNEFENCH_01544	4.64e-151	-	-	-	S	-	-	-	repeat protein
BNEFENCH_01545	0.0	recD2	3.1.11.5	-	L	ko:K03581	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
BNEFENCH_01546	2.86e-312	-	-	-	S	-	-	-	Sterol carrier protein domain
BNEFENCH_01547	1.15e-232	ytlR	-	-	I	-	-	-	Diacylglycerol kinase catalytic domain
BNEFENCH_01548	0.0	rnjA	-	-	J	ko:K12574	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
BNEFENCH_01549	2.02e-43	ykzG	-	-	S	-	-	-	Belongs to the UPF0356 family
BNEFENCH_01550	1.11e-95	-	-	-	-	-	-	-	-
BNEFENCH_01551	1.42e-62	-	-	-	-	-	-	-	-
BNEFENCH_01552	4.82e-132	def	3.5.1.88	-	J	ko:K01462	-	ko00000,ko01000	Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
BNEFENCH_01553	5.13e-112	-	-	-	S	-	-	-	E1-E2 ATPase
BNEFENCH_01554	1.42e-267	pdhA	1.2.4.1	-	C	ko:K00161	ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04922,ko05230,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200,map04066,map04922,map05230	br01601,ko00000,ko00001,ko00002,ko01000	Dehydrogenase E1 component
BNEFENCH_01555	2.7e-231	pdhB	1.2.4.1	-	C	ko:K00162	ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04922,ko05230,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200,map04066,map04922,map05230	br01601,ko00000,ko00001,ko00002,ko01000	Transketolase, C-terminal domain protein
BNEFENCH_01556	0.0	pdhC	2.3.1.12	-	C	ko:K00627	ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
BNEFENCH_01557	0.0	pdhD	1.8.1.4	-	C	ko:K00382	ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000,ko04147	Dehydrogenase
BNEFENCH_01558	4.32e-202	-	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	L-malate dehydrogenase activity
BNEFENCH_01559	6.15e-62	yktA	-	-	S	-	-	-	Belongs to the UPF0223 family
BNEFENCH_01560	3.56e-189	suhB	3.1.3.25	-	G	ko:K01092	ko00521,ko00562,ko01100,ko04070,map00521,map00562,map01100,map04070	ko00000,ko00001,ko00002,ko01000	Belongs to the inositol monophosphatase superfamily
BNEFENCH_01561	0.0	typA	-	-	T	ko:K06207	-	ko00000	GTP-binding protein TypA
BNEFENCH_01562	4.76e-269	ftsW	-	-	D	ko:K03588	ko04112,map04112	ko00000,ko00001,ko02000,ko03036	Belongs to the SEDS family
BNEFENCH_01563	0.0	pyc	6.4.1.1	-	C	ko:K01958	ko00020,ko00620,ko00720,ko01100,ko01120,ko01200,ko01230,map00020,map00620,map00720,map01100,map01120,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
BNEFENCH_01564	2.43e-83	ylbG	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2129)
BNEFENCH_01565	9.93e-130	rsmD	2.1.1.171	-	L	ko:K08316	-	ko00000,ko01000,ko03009	RNA methyltransferase, RsmD family
BNEFENCH_01566	1.08e-113	coaD	2.7.7.3	-	H	ko:K00954	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
BNEFENCH_01567	1.82e-233	lon	-	-	T	ko:K07177	ko02024,map02024	ko00000,ko00001,ko01002	Belongs to the peptidase S16 family
BNEFENCH_01568	3.64e-148	comEA	-	-	L	ko:K02237	-	ko00000,ko00002,ko02044	Competence protein ComEA
BNEFENCH_01569	0.0	comEC	-	-	S	ko:K02238	-	ko00000,ko00002,ko02044	Competence protein ComEC
BNEFENCH_01570	5.08e-222	holA	2.7.7.7	-	L	ko:K02340	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III delta subunit
BNEFENCH_01571	1.44e-47	rpsT	-	-	J	ko:K02968	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 16S ribosomal RNA
BNEFENCH_01573	5e-57	rpsO	-	-	J	ko:K02956	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
BNEFENCH_01574	1.09e-61	-	-	-	-	-	-	-	-
BNEFENCH_01575	0.0	rnjB	-	-	J	ko:K12574	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
BNEFENCH_01576	1.3e-211	-	-	-	S	-	-	-	Tetratricopeptide repeat
BNEFENCH_01577	4.73e-286	tuf	-	-	J	ko:K02358,ko:K15771	ko02010,map02010	ko00000,ko00001,ko00002,ko02000,ko03012,ko03029,ko04147	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
BNEFENCH_01578	0.0	yknV	-	-	V	ko:K11085	ko02010,map02010	ko00000,ko00001,ko01000,ko02000	ABC transporter
BNEFENCH_01579	2.74e-287	tig	-	-	D	ko:K03545	-	ko00000	Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
BNEFENCH_01580	1.19e-296	clpX	-	-	O	ko:K03544	ko04112,map04112	ko00000,ko00001,ko03110	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
BNEFENCH_01581	2.74e-138	engB	-	-	D	ko:K03978	-	ko00000,ko03036	Necessary for normal cell division and for the maintenance of normal septation
BNEFENCH_01582	2.28e-63	-	-	-	S	-	-	-	mazG nucleotide pyrophosphohydrolase
BNEFENCH_01583	3.33e-28	-	-	-	-	-	-	-	-
BNEFENCH_01584	0.0	glnPH2	-	-	P	ko:K02029,ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter permease
BNEFENCH_01585	1.89e-172	glnQ	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
BNEFENCH_01586	0.0	uvrC	-	-	L	ko:K03703	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
BNEFENCH_01587	0.0	fruA	2.7.1.202	-	GT	ko:K02768,ko:K02769,ko:K02770	ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphotransferase System
BNEFENCH_01588	2.76e-218	pfkB	2.7.1.56	-	H	ko:K00882	ko00051,map00051	ko00000,ko00001,ko01000	Belongs to the carbohydrate kinase PfkB family. LacC subfamily
BNEFENCH_01589	2.78e-170	fruR	-	-	K	ko:K03436	-	ko00000,ko03000	DeoR C terminal sensor domain
BNEFENCH_01590	3.37e-309	obg	-	-	S	ko:K03979	-	ko00000,ko01000,ko03009	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
BNEFENCH_01591	0.0	oatA	-	-	I	-	-	-	Acyltransferase
BNEFENCH_01592	2.71e-233	rnz	3.1.26.11	-	J	ko:K00784	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
BNEFENCH_01593	1.83e-183	yqjQ	-	-	S	ko:K07124	-	ko00000	Enoyl-(Acyl carrier protein) reductase
BNEFENCH_01594	2.47e-65	-	-	-	S	-	-	-	Lipopolysaccharide assembly protein A domain
BNEFENCH_01595	0.0	clpB	-	-	O	ko:K03695	ko04213,map04213	ko00000,ko00001,ko03110	Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
BNEFENCH_01596	1.35e-38	rpmF	-	-	J	ko:K02911	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Belongs to the bacterial ribosomal protein bL32 family
BNEFENCH_01597	6.3e-123	-	-	-	K	-	-	-	Domain of unknown function (DUF1836)
BNEFENCH_01598	0.0	ycjM	3.1.3.5, 3.1.3.6, 3.1.4.16	-	F	ko:K01119,ko:K08693	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	5'-nucleotidase, C-terminal domain
BNEFENCH_01599	2.47e-184	-	-	-	-	-	-	-	-
BNEFENCH_01600	8.1e-36	-	-	-	S	-	-	-	Protein of unknown function (DUF2929)
BNEFENCH_01601	0.0	dnaE	2.7.7.7	-	L	ko:K02337	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase
BNEFENCH_01602	2.21e-227	pfkA	2.7.1.11	-	F	ko:K00850	ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04152,ko05230,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04152,map05230	ko00000,ko00001,ko00002,ko01000,ko01009,ko03019	Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
BNEFENCH_01603	0.0	pyk	2.7.1.40	-	G	ko:K00873	ko00010,ko00230,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko04930,ko05165,ko05203,ko05230,map00010,map00230,map00620,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map04930,map05165,map05203,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Belongs to the pyruvate kinase family
BNEFENCH_01604	2.5e-94	ytwI	-	-	S	-	-	-	Protein of unknown function (DUF441)
BNEFENCH_01605	5.96e-207	yitL	-	-	S	ko:K00243	-	ko00000	S1 domain
BNEFENCH_01606	9.95e-211	xerD	-	-	D	ko:K04763	-	ko00000,ko03036	recombinase XerD
BNEFENCH_01607	1.59e-88	ribT	-	-	K	ko:K02859	-	ko00000	COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
BNEFENCH_01608	1.07e-159	scpA	-	-	D	ko:K05896	-	ko00000,ko03036	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
BNEFENCH_01609	8.74e-139	scpB	-	-	D	ko:K06024	-	ko00000,ko03036	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
BNEFENCH_01610	6.35e-175	rluB	5.4.99.22	-	J	ko:K06178	-	ko00000,ko01000,ko03009	Belongs to the pseudouridine synthase RsuA family
BNEFENCH_01611	1.52e-123	ribU	-	-	U	-	-	-	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
BNEFENCH_01612	1.16e-60	fer	-	-	C	ko:K05337	-	ko00000	4Fe-4S single cluster domain of Ferredoxin I
BNEFENCH_01613	4.14e-231	-	-	-	S	-	-	-	Helix-turn-helix domain
BNEFENCH_01614	0.0	recQ	3.6.4.12	-	L	ko:K03654	ko03018,map03018	ko00000,ko00001,ko01000,ko03400	ATP-dependent DNA helicase RecQ
BNEFENCH_01615	1.68e-104	-	-	-	M	-	-	-	Lysin motif
BNEFENCH_01616	2.04e-149	cmk	2.7.4.25	-	F	ko:K00945	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the cytidylate kinase family. Type 1 subfamily
BNEFENCH_01617	1.72e-303	rpsA	-	-	J	ko:K02945	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein S1
BNEFENCH_01618	7.41e-312	der	-	-	S	ko:K03977	-	ko00000,ko03009	GTPase that plays an essential role in the late steps of ribosome biogenesis
BNEFENCH_01619	1.2e-54	hup	-	-	L	ko:K03530	-	ko00000,ko03032,ko03036,ko03400	Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
BNEFENCH_01620	1.52e-302	XK27_05225	-	-	S	-	-	-	Tetratricopeptide repeat protein
BNEFENCH_01621	8.71e-200	ypjC	-	-	S	-	-	-	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BNEFENCH_01622	2.16e-283	cca	2.7.7.72	-	J	ko:K00974	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
BNEFENCH_01623	2.95e-110	-	-	-	-	-	-	-	-
BNEFENCH_01624	0.0	yfmR	-	-	S	ko:K15738	-	ko00000,ko02000	ABC transporter, ATP-binding protein
BNEFENCH_01625	1.41e-242	thyA	2.1.1.45	-	F	ko:K00560	ko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523	ko00000,ko00001,ko00002,ko01000	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
BNEFENCH_01626	3e-118	folA	1.5.1.3	-	H	ko:K00287	ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523	ko00000,ko00001,ko00002,ko01000	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
BNEFENCH_01627	1.51e-147	hlyIII	-	-	S	ko:K11068	-	ko00000,ko02042	protein, hemolysin III
BNEFENCH_01628	4.02e-189	WQ51_01275	-	-	S	-	-	-	EDD domain protein, DegV family
BNEFENCH_01629	1.39e-195	XK27_03630	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase
BNEFENCH_01630	2.61e-146	ypmS	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2140)
BNEFENCH_01631	6.11e-111	msrA	1.8.4.11	-	C	ko:K07304	-	ko00000,ko01000	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
BNEFENCH_01632	2.95e-54	yozE	-	-	S	-	-	-	Belongs to the UPF0346 family
BNEFENCH_01633	9.98e-315	ctpA	3.4.21.102	-	M	ko:K03797	-	ko00000,ko01000,ko01002	Belongs to the peptidase S41A family
BNEFENCH_01634	6.17e-16	-	-	-	-	-	-	-	-
BNEFENCH_01635	3.97e-19	XK27_01125	-	-	L	ko:K07484	-	ko00000	PFAM IS66 Orf2 family protein
BNEFENCH_01637	7.39e-16	-	-	-	L	-	-	-	Transposase IS66 family
BNEFENCH_01640	1.32e-11	-	3.6.3.55	-	P	ko:K01990,ko:K06857,ko:K10038	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	tungstate ion transport
BNEFENCH_01641	2.14e-16	-	-	-	V	ko:K07451	-	ko00000,ko01000,ko02048	endonuclease activity
BNEFENCH_01642	5.1e-205	rbgA	-	-	S	ko:K14540	-	ko00000,ko03009	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
BNEFENCH_01643	3.4e-177	rnhB	3.1.26.4	-	L	ko:K03470	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
BNEFENCH_01644	1.05e-185	dprA	-	-	LU	ko:K04096	-	ko00000	DNA protecting protein DprA
BNEFENCH_01645	0.0	topA	5.99.1.2	-	L	ko:K03168	-	ko00000,ko01000,ko03032,ko03400	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
BNEFENCH_01646	0.0	trmFO	2.1.1.74	-	J	ko:K04094	-	ko00000,ko01000,ko03016,ko03036	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
BNEFENCH_01647	1.66e-216	xerC	-	-	D	ko:K03733,ko:K04763	-	ko00000,ko03036	Belongs to the 'phage' integrase family. XerC subfamily
BNEFENCH_01648	2.06e-119	hslV	3.4.25.2	-	O	ko:K01419	-	ko00000,ko01000,ko01002	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
BNEFENCH_01649	0.0	hslU	-	-	O	ko:K03667	-	ko00000,ko03110	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
BNEFENCH_01650	2.19e-218	lacX	5.1.3.3	-	G	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Aldose 1-epimerase
BNEFENCH_01651	6.92e-141	plsY	2.3.1.15	-	I	ko:K08591	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
BNEFENCH_01652	0.0	parE	-	-	L	ko:K02622	-	ko00000,ko01000,ko02048,ko03032,ko03036	Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
BNEFENCH_01653	0.0	parC	-	-	L	ko:K02621	-	ko00000,ko01000,ko02048,ko03032,ko03036	Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
BNEFENCH_01654	0.0	pflB	2.3.1.54	-	C	ko:K00656	ko00620,ko00640,ko00650,ko01100,ko01120,map00620,map00640,map00650,map01100,map01120	ko00000,ko00001,ko01000	Pyruvate formate lyase-like
BNEFENCH_01655	1.48e-216	pflA	1.97.1.4	-	C	ko:K04069	-	ko00000,ko01000	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
BNEFENCH_01656	2.6e-232	-	-	-	K	-	-	-	LysR substrate binding domain
BNEFENCH_01657	3.24e-220	ppaC	3.6.1.1	-	C	ko:K15986	ko00190,map00190	ko00000,ko00001,ko01000	inorganic pyrophosphatase
BNEFENCH_01658	6.01e-269	xerS	-	-	L	ko:K04763	-	ko00000,ko03036	Belongs to the 'phage' integrase family
BNEFENCH_01659	7.18e-79	-	-	-	-	-	-	-	-
BNEFENCH_01660	0.0	XK27_05700	-	-	V	ko:K02004,ko:K19084	ko02010,ko02020,map02010,map02020	ko00000,ko00001,ko00002,ko02000	FtsX-like permease family
BNEFENCH_01661	1.55e-175	XK27_05695	-	-	V	ko:K02003,ko:K19083	ko02010,ko02020,map02010,map02020	ko00000,ko00001,ko00002,ko02000	ABC transporter, ATP-binding protein
BNEFENCH_01662	2.01e-218	kinG	-	-	T	-	-	-	Histidine kinase-like ATPases
BNEFENCH_01663	2.9e-158	-	-	-	T	-	-	-	Transcriptional regulatory protein, C terminal
BNEFENCH_01664	6.44e-242	-	-	-	EGP	ko:K08217	-	br01600,ko00000,ko01504,ko02000	Transmembrane secretion effector
BNEFENCH_01665	5.88e-62	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
BNEFENCH_01666	6.86e-83	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
BNEFENCH_01667	2.92e-144	-	-	-	C	-	-	-	Nitroreductase family
BNEFENCH_01668	2.22e-256	hisC	2.6.1.9	-	E	ko:K00817	ko00340,ko00350,ko00360,ko00400,ko00401,ko00960,ko01100,ko01110,ko01130,ko01230,map00340,map00350,map00360,map00400,map00401,map00960,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
BNEFENCH_01669	6.09e-70	hisE	3.6.1.31	-	E	ko:K01523	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	phosphoribosyl-ATP diphosphatase activity
BNEFENCH_01670	5.84e-77	hisI	3.5.4.19, 3.6.1.31	-	E	ko:K01496,ko:K11755	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
BNEFENCH_01671	1.42e-169	hisF	-	-	E	ko:K02500	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
BNEFENCH_01672	2.66e-158	hisA	5.3.1.16	-	E	ko:K01814	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
BNEFENCH_01673	4.89e-146	hisH	-	-	E	ko:K02501	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
BNEFENCH_01674	3.22e-135	hisB	4.2.1.19	-	E	ko:K01693	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	imidazoleglycerol-phosphate dehydratase
BNEFENCH_01675	3.4e-294	hisD	1.1.1.23	-	E	ko:K00013	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
BNEFENCH_01676	2.81e-142	hisG	2.4.2.17	-	F	ko:K00765,ko:K02502	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity
BNEFENCH_01677	3.15e-277	hisZ	-	-	E	ko:K02502	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
BNEFENCH_01678	1.99e-260	hisC	2.6.1.9	-	E	ko:K00817	ko00340,ko00350,ko00360,ko00400,ko00401,ko00960,ko01100,ko01110,ko01130,ko01230,map00340,map00350,map00360,map00400,map00401,map00960,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
BNEFENCH_01679	3.35e-129	-	3.6.1.13	-	L	ko:K01515	ko00230,map00230	ko00000,ko00001,ko01000	Belongs to the Nudix hydrolase family
BNEFENCH_01680	2.95e-205	-	-	-	S	-	-	-	EDD domain protein, DegV family
BNEFENCH_01681	0.0	FbpA	-	-	K	-	-	-	Fibronectin-binding protein
BNEFENCH_01682	1.73e-66	-	-	-	S	-	-	-	MazG-like family
BNEFENCH_01683	8.21e-250	pfoS/R	-	-	S	ko:K07035	-	ko00000	Phosphotransferase system, EIIC
BNEFENCH_01684	2.13e-227	panE	1.1.1.169	-	H	ko:K00077	ko00770,ko01100,ko01110,map00770,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
BNEFENCH_01685	7.77e-282	bfmBB	2.3.1.12, 2.3.1.168	-	C	ko:K00627,ko:K09699	ko00010,ko00020,ko00280,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00280,map00620,map00640,map01100,map01110,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
BNEFENCH_01686	3.05e-234	bfmBAB	1.2.4.4	-	C	ko:K00167,ko:K21417	ko00280,ko00640,ko01100,ko01110,ko01130,map00280,map00640,map01100,map01110,map01130	br01601,ko00000,ko00001,ko00002,ko01000	Transketolase, pyrimidine binding domain
BNEFENCH_01687	5.29e-238	bfmBAA	1.2.4.4	-	C	ko:K00166	ko00280,ko00640,ko01100,ko01110,ko01130,map00280,map00640,map01100,map01110,map01130	br01601,ko00000,ko00001,ko00002,ko01000	Dehydrogenase E1 component
BNEFENCH_01688	0.0	bfmBC	1.8.1.4	-	C	ko:K00382	ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000,ko04147	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
BNEFENCH_01689	6.41e-261	buk	2.7.2.7	-	C	ko:K00929	ko00650,ko01100,map00650,map01100	ko00000,ko00001,ko01000	Acetokinase family
BNEFENCH_01690	2.03e-189	ptb	2.3.1.19	-	C	ko:K00634	ko00650,ko01100,map00650,map01100	ko00000,ko00001,ko01000	Phosphate acetyl/butaryl transferase
BNEFENCH_01691	1.02e-145	pyrE	2.4.2.10	-	F	ko:K00762	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
BNEFENCH_01692	3.8e-163	pyrF	4.1.1.23	-	F	ko:K01591	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
BNEFENCH_01693	1.63e-199	pyrD	1.3.1.14, 1.3.98.1	-	F	ko:K00226,ko:K17828	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
BNEFENCH_01694	0.0	carB	6.3.5.5	-	F	ko:K01955	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthase
BNEFENCH_01695	5.32e-267	carA	6.3.5.5	-	F	ko:K01956	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthetase glutamine chain
BNEFENCH_01696	2e-302	pyrC	3.5.2.3	-	F	ko:K01465	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
BNEFENCH_01697	4.42e-228	pyrB	2.1.3.2	-	F	ko:K00609	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the ATCase OTCase family
BNEFENCH_01698	1.64e-299	pyrP	-	-	F	ko:K02824	-	ko00000,ko02000	Permease
BNEFENCH_01699	1.05e-125	pyrR	2.4.2.9	-	F	ko:K02825	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000,ko03000	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
BNEFENCH_01700	6.04e-221	rluD	5.4.99.23	-	J	ko:K06180	-	ko00000,ko01000,ko03009	Responsible for synthesis of pseudouridine from uracil
BNEFENCH_01701	2.41e-106	lspA	3.4.23.36	-	MU	ko:K03101	ko03060,map03060	ko00000,ko00001,ko01000,ko01002	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
BNEFENCH_01702	0.0	fhs	6.3.4.3	-	F	ko:K01938	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Belongs to the formate--tetrahydrofolate ligase family
BNEFENCH_01703	8.5e-61	-	-	-	S	-	-	-	Family of unknown function (DUF5322)
BNEFENCH_01704	3.93e-90	rnhA	3.1.26.4	-	L	ko:K03469	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Ribonuclease HI
BNEFENCH_01705	1.21e-142	XK27_02070	-	-	S	ko:K07078	-	ko00000	Nitroreductase family
BNEFENCH_01706	0.0	cls	-	-	I	ko:K06131	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BNEFENCH_01707	1.91e-63	-	-	-	-	-	-	-	-
BNEFENCH_01708	0.0	-	-	-	S	-	-	-	Mga helix-turn-helix domain
BNEFENCH_01709	8.72e-52	nrdH	-	-	O	ko:K06191	-	ko00000	Glutaredoxin
BNEFENCH_01710	0.0	nrdE	1.17.4.1	-	F	ko:K00525	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
BNEFENCH_01711	8.83e-242	nrdF	1.17.4.1	-	F	ko:K00526	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
BNEFENCH_01712	7.8e-206	lysR	-	-	K	-	-	-	Transcriptional regulator
BNEFENCH_01713	0.0	pepO	-	-	O	ko:K07386	-	ko00000,ko01000,ko01002	Peptidase family M13
BNEFENCH_01714	1.42e-248	lplA	6.3.1.20	-	H	ko:K03800	ko00785,ko01100,map00785,map01100	ko00000,ko00001,ko01000	Lipoate-protein ligase
BNEFENCH_01715	7.29e-46	-	-	-	-	-	-	-	-
BNEFENCH_01716	7.36e-222	serA	1.1.1.399, 1.1.1.95	-	EH	ko:K00058	ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
BNEFENCH_01717	9.39e-278	ypsC	-	-	L	ko:K07444	-	ko00000,ko01000	Belongs to the methyltransferase superfamily
BNEFENCH_01718	7.09e-88	gpsB	-	-	D	-	-	-	Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
BNEFENCH_01719	2.19e-136	ypsA	-	-	S	-	-	-	Belongs to the UPF0398 family
BNEFENCH_01720	5.12e-157	recU	-	-	L	ko:K03700	-	ko00000,ko03400	Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
BNEFENCH_01721	0.0	ponA	2.4.1.129, 3.4.16.4	GT51	M	ko:K05366	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01003,ko01011	penicillin-binding protein 1A
BNEFENCH_01722	6e-76	comEB	3.5.4.12	-	F	ko:K01493	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko02044	ComE operon protein 2
BNEFENCH_01723	1.08e-147	nth	4.2.99.18	-	L	ko:K10773	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
BNEFENCH_01724	3.19e-146	dnaD	-	-	L	ko:K02086	-	ko00000	DnaD domain protein
BNEFENCH_01725	0.0	asnS	6.1.1.22	-	J	ko:K01893	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Asparaginyl-tRNA synthetase
BNEFENCH_01726	1.34e-278	aspB	2.6.1.1, 2.6.1.14	-	E	ko:K00812,ko:K22457	ko00220,ko00250,ko00270,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko01000,ko01007	Aminotransferase
BNEFENCH_01727	3.5e-112	ypmB	-	-	S	-	-	-	Protein conserved in bacteria
BNEFENCH_01729	0.0	dinG	3.6.4.12	-	L	ko:K03722	-	ko00000,ko01000,ko03400	helicase involved in DNA repair and perhaps also replication
BNEFENCH_01730	0.0	addA	3.6.4.12	-	L	ko:K16898	-	ko00000,ko01000,ko03400	ATP-dependent helicase nuclease subunit A
BNEFENCH_01731	0.0	rexB	3.6.4.12	-	L	ko:K16899	-	ko00000,ko01000,ko03400	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
BNEFENCH_01732	1.31e-215	mvk	2.7.1.36	-	I	ko:K00869	ko00900,ko01100,ko01110,ko01130,ko04146,map00900,map01100,map01110,map01130,map04146	ko00000,ko00001,ko00002,ko01000	mevalonate kinase
BNEFENCH_01733	3.82e-231	mvaD	4.1.1.33	-	I	ko:K01597	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	diphosphomevalonate decarboxylase
BNEFENCH_01734	4.56e-244	fni	5.3.3.2	-	C	ko:K01823	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
BNEFENCH_01735	0.0	rsmF	-	-	J	-	-	-	NOL1 NOP2 sun family protein
BNEFENCH_01736	9.31e-224	-	-	-	-	-	-	-	-
BNEFENCH_01737	1.06e-182	-	-	-	-	-	-	-	-
BNEFENCH_01738	2.32e-79	yitW	-	-	S	-	-	-	Iron-sulfur cluster assembly protein
BNEFENCH_01739	2.03e-35	dmpI	5.3.2.6	-	G	ko:K01821	ko00362,ko00621,ko00622,ko01100,ko01120,ko01220,map00362,map00621,map00622,map01100,map01120,map01220	ko00000,ko00001,ko00002,ko01000	Belongs to the 4-oxalocrotonate tautomerase family
BNEFENCH_01740	4.01e-191	yqfO	-	-	S	-	-	-	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
BNEFENCH_01741	2.29e-160	trmK	2.1.1.217	-	S	ko:K06967	-	ko00000,ko01000,ko03016	SAM-dependent methyltransferase
BNEFENCH_01742	9.19e-249	sigA	-	-	K	ko:K03086	-	ko00000,ko03021	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
BNEFENCH_01743	0.0	dnaG	-	-	L	ko:K02316	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
BNEFENCH_01744	0.0	glyS	6.1.1.14	-	J	ko:K01879	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Glycyl-tRNA synthetase beta subunit
BNEFENCH_01745	1.48e-219	glyQ	6.1.1.14	-	J	ko:K01878	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	glycyl-tRNA synthetase alpha subunit
BNEFENCH_01746	6.23e-46	sip	-	-	L	-	-	-	Phage integrase family
BNEFENCH_01750	1.69e-15	-	-	-	-	-	-	-	-
BNEFENCH_01751	4.99e-72	-	-	-	-	-	-	-	-
BNEFENCH_01752	3.64e-70	-	-	-	-	-	-	-	-
BNEFENCH_01753	2.87e-181	recO	-	-	L	ko:K03584	ko03440,map03440	ko00000,ko00001,ko03400	Involved in DNA repair and RecF pathway recombination
BNEFENCH_01754	2.76e-216	era	-	-	S	ko:K03595	-	ko00000,ko03009,ko03029	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
BNEFENCH_01755	1.38e-84	cdd	3.5.4.5	-	F	ko:K01489	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis
BNEFENCH_01756	6.78e-82	dgkA	2.7.1.107, 2.7.1.66	-	M	ko:K00887,ko:K00901	ko00550,ko00561,ko00564,ko01100,ko01110,ko04070,ko04072,ko05231,map00550,map00561,map00564,map01100,map01110,map04070,map04072,map05231	ko00000,ko00001,ko01000	Diacylglycerol kinase
BNEFENCH_01757	1.03e-106	ybeY	-	-	S	ko:K07042	-	ko00000,ko03009	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
BNEFENCH_01758	3.27e-229	phoH	-	-	T	ko:K06217	-	ko00000	phosphate starvation-inducible protein PhoH
BNEFENCH_01760	1.81e-88	yqeY	-	-	S	ko:K09117	-	ko00000	YqeY-like protein
BNEFENCH_01761	3.98e-29	rpsU	-	-	J	ko:K02970	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bS21 family
BNEFENCH_01762	8.44e-199	yqfL	2.7.11.33, 2.7.4.28	-	F	ko:K09773	-	ko00000,ko01000	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
BNEFENCH_01763	1.37e-207	nfo	3.1.21.2	-	L	ko:K01151	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
BNEFENCH_01764	3.1e-216	yitT	-	-	S	-	-	-	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BNEFENCH_01765	7.56e-108	msrB	1.8.4.12	-	O	ko:K07305	-	ko00000,ko01000	peptide methionine sulfoxide reductase
BNEFENCH_01766	0.0	aspS	6.1.1.12	-	J	ko:K01876	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
BNEFENCH_01767	3.25e-311	hisS	6.1.1.21	-	J	ko:K01892	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	histidyl-tRNA synthetase
BNEFENCH_01768	3.9e-48	XK27_04345	3.6.1.1	-	C	ko:K01507	ko00190,map00190	ko00000,ko00001,ko01000	Inorganic pyrophosphatase
BNEFENCH_01769	7.04e-217	-	-	-	C	-	-	-	nadph quinone reductase
BNEFENCH_01770	2.52e-52	-	-	-	-	-	-	-	-
BNEFENCH_01771	5.6e-26	-	-	-	-	-	-	-	-
BNEFENCH_01772	5.67e-191	-	-	-	K	-	-	-	Helix-turn-helix
BNEFENCH_01773	0.0	-	-	-	-	-	-	-	-
BNEFENCH_01774	3.28e-199	-	-	-	V	-	-	-	ABC transporter
BNEFENCH_01775	1.95e-108	-	-	-	FG	-	-	-	adenosine 5'-monophosphoramidase activity
BNEFENCH_01776	3.28e-313	lytH	3.5.1.28	-	M	ko:K01448	ko01503,map01503	ko00000,ko00001,ko00002,ko01000,ko01011,ko03036	N-acetylmuramoyl-L-alanine amidase
BNEFENCH_01777	1.35e-150	-	-	-	J	-	-	-	HAD-hyrolase-like
BNEFENCH_01778	1.59e-99	dtd	-	-	J	ko:K07560	-	ko00000,ko01000,ko03016	rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
BNEFENCH_01779	0.0	relA	2.7.6.5	-	KT	ko:K00951	ko00230,map00230	ko00000,ko00001,ko01000	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
BNEFENCH_01780	5.49e-58	-	-	-	-	-	-	-	-
BNEFENCH_01781	3.13e-170	rsmE	2.1.1.193	-	J	ko:K09761	-	ko00000,ko01000,ko03009	Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
BNEFENCH_01782	6.78e-220	prmA	-	-	J	ko:K02687	-	ko00000,ko01000,ko03009	Ribosomal protein L11 methyltransferase
BNEFENCH_01783	1.17e-111	XK27_03960	-	-	S	-	-	-	Protein of unknown function (DUF3013)
BNEFENCH_01784	1.68e-134	-	3.2.2.21	-	L	ko:K03652	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Belongs to the DNA glycosylase MPG family
BNEFENCH_01785	2.23e-50	-	-	-	-	-	-	-	-
BNEFENCH_01786	8.05e-33	-	-	-	S	-	-	-	Protein of unknown function (DUF1093)
BNEFENCH_01787	1.11e-35	-	-	-	S	-	-	-	Protein of unknown function (DUF1093)
BNEFENCH_01788	6.1e-27	-	-	-	-	-	-	-	-
BNEFENCH_01789	1.72e-64	-	-	-	-	-	-	-	-
BNEFENCH_01790	1.79e-59	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
BNEFENCH_01793	5.15e-142	-	-	-	S	-	-	-	Flavodoxin-like fold
BNEFENCH_01794	1.48e-128	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
BNEFENCH_01795	2.69e-186	hutG	3.5.3.8	-	E	ko:K01479	ko00340,ko01100,map00340,map01100	ko00000,ko00001,ko00002,ko01000	N-formylglutamate amidohydrolase
BNEFENCH_01796	1.66e-71	XK27_08430	-	-	S	-	-	-	Staphylococcal protein of unknown function (DUF960)
BNEFENCH_01797	2.86e-118	ybaK	-	-	S	ko:K03976	-	ko00000,ko01000,ko03016	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
BNEFENCH_01798	1.7e-123	apt	2.4.2.7	-	F	ko:K00759	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000,ko04147	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
BNEFENCH_01799	0.0	recJ	-	-	L	ko:K07462	ko03410,ko03430,ko03440,map03410,map03430,map03440	ko00000,ko00001,ko01000,ko03400	Single-stranded-DNA-specific exonuclease RecJ
BNEFENCH_01800	8.85e-76	-	-	-	-	-	-	-	-
BNEFENCH_01801	5.87e-109	-	-	-	S	-	-	-	ASCH
BNEFENCH_01802	1.54e-32	-	-	-	-	-	-	-	-
BNEFENCH_01803	0.0	lepA	-	-	M	ko:K03596	ko05134,map05134	ko00000,ko00001	Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
BNEFENCH_01804	9.45e-261	dnaJ	-	-	O	ko:K03686	-	ko00000,ko03029,ko03110	ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
BNEFENCH_01805	0.0	dnaK	-	-	O	ko:K04043	ko03018,ko04212,ko05152,map03018,map04212,map05152	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	Heat shock 70 kDa protein
BNEFENCH_01806	3.18e-127	grpE	-	-	O	ko:K03687	-	ko00000,ko03029,ko03110	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
BNEFENCH_01807	1.6e-246	hrcA	-	-	K	ko:K03705	-	ko00000,ko03000	Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
BNEFENCH_01808	8.81e-288	hemN	-	-	H	-	-	-	Involved in the biosynthesis of porphyrin-containing compound
BNEFENCH_01809	9.76e-229	ribF	2.7.1.26, 2.7.7.2	-	H	ko:K11753	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Belongs to the ribF family
BNEFENCH_01810	2.83e-213	truB	5.4.99.25	-	J	ko:K03177,ko:K03483	-	ko00000,ko01000,ko03000,ko03016	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
BNEFENCH_01811	4.46e-183	terC	-	-	P	-	-	-	Integral membrane protein TerC family
BNEFENCH_01812	1.27e-76	rbfA	-	-	J	ko:K02834	-	ko00000,ko03009	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
BNEFENCH_01813	0.0	infB	-	-	J	ko:K02519	-	ko00000,ko03012,ko03029	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
BNEFENCH_01814	1.29e-60	ylxQ	-	-	J	-	-	-	ribosomal protein
BNEFENCH_01815	9.63e-61	ylxR	-	-	K	ko:K07742	-	ko00000	Protein of unknown function (DUF448)
BNEFENCH_01816	4.13e-277	nusA	-	-	K	ko:K02600	-	ko00000,ko03009,ko03021	Participates in both transcription termination and antitermination
BNEFENCH_01817	1.33e-110	rimP	-	-	J	ko:K09748	-	ko00000,ko03009	Required for maturation of 30S ribosomal subunits
BNEFENCH_01818	0.0	polC	2.7.7.7	-	L	ko:K03763	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
BNEFENCH_01819	0.0	proS	6.1.1.15	-	J	ko:K01881	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
BNEFENCH_01820	3.52e-292	rseP	-	-	M	ko:K11749	ko02024,ko04112,map02024,map04112	ko00000,ko00001,ko01000,ko01002	zinc metalloprotease
BNEFENCH_01821	8.94e-178	cdsA	2.7.7.41	-	S	ko:K00981	ko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070	ko00000,ko00001,ko00002,ko01000	Belongs to the CDS family
BNEFENCH_01822	6.38e-181	uppS	2.5.1.31	-	H	ko:K00806	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
BNEFENCH_01823	1.73e-121	frr	-	-	J	ko:K02838	-	ko00000,ko03012	Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
BNEFENCH_01824	5.86e-167	pyrH	2.7.4.22	-	F	ko:K09903	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphorylation of UMP to UDP
BNEFENCH_01825	1.63e-200	tsf	-	-	J	ko:K02357	-	ko00000,ko03012,ko03029	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
BNEFENCH_01826	1.18e-182	rpsB	-	-	J	ko:K02967	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uS2 family
BNEFENCH_01827	1.88e-61	yazA	-	-	L	ko:K07461	-	ko00000	GIY-YIG catalytic domain protein
BNEFENCH_01828	2.05e-168	yabB	2.1.1.223	-	L	ko:K07461,ko:K15460	-	ko00000,ko01000,ko03016	Methyltransferase small domain
BNEFENCH_01829	8.45e-160	plsC	2.3.1.51	-	I	ko:K00655	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Acyltransferase
BNEFENCH_01830	1.36e-292	yhdG	-	-	E	ko:K03294	-	ko00000	Amino Acid
BNEFENCH_01831	4.28e-181	yejC	-	-	S	-	-	-	Protein of unknown function (DUF1003)
BNEFENCH_01832	0.0	mdlB	-	-	V	ko:K06147,ko:K18890	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
BNEFENCH_01833	0.0	mdlA	-	-	V	ko:K06148,ko:K18889	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
BNEFENCH_01834	1.39e-40	yneF	-	-	S	ko:K09976	-	ko00000	UPF0154 protein
BNEFENCH_01835	2.84e-48	ynzC	-	-	S	-	-	-	UPF0291 protein
BNEFENCH_01836	9.42e-28	-	-	-	-	-	-	-	-
BNEFENCH_01837	4.71e-74	rplS	-	-	J	ko:K02884	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
BNEFENCH_01838	6.15e-186	trmD	2.1.1.228	-	J	ko:K00554	-	ko00000,ko01000,ko03016	Belongs to the RNA methyltransferase TrmD family
BNEFENCH_01839	2.16e-120	rimM	-	-	J	ko:K02860	-	ko00000,ko03009	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
BNEFENCH_01840	1.55e-51	ylqC	-	-	S	ko:K06960	-	ko00000	Belongs to the UPF0109 family
BNEFENCH_01841	2.97e-59	rpsP	-	-	J	ko:K02959	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Belongs to the bacterial ribosomal protein bS16 family
BNEFENCH_01842	3.57e-302	ffh	3.6.5.4	-	U	ko:K03106	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko01000,ko02044	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
BNEFENCH_01843	7.32e-75	ylxM	-	-	S	ko:K09787	-	ko00000	Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
BNEFENCH_01845	7.91e-70	-	-	-	-	-	-	-	-
BNEFENCH_01846	2.6e-232	ftsY	-	-	U	ko:K03110	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
BNEFENCH_01847	0.0	smc	-	-	D	ko:K03529	-	ko00000,ko03036	Required for chromosome condensation and partitioning
BNEFENCH_01848	2.8e-161	rnc	3.1.26.3	-	J	ko:K03685	ko03008,ko05205,map03008,map05205	ko00000,ko00001,ko01000,ko03009,ko03019,ko03036	Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
BNEFENCH_01849	0.0	oppA1	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
BNEFENCH_01850	1.8e-197	oppC	-	-	EP	ko:K02034	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
BNEFENCH_01851	3.2e-216	oppB	-	-	P	ko:K02033,ko:K02034	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
BNEFENCH_01852	5.65e-229	oppF	-	-	P	ko:K02032	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
BNEFENCH_01853	1.22e-246	oppD	-	-	P	ko:K02031,ko:K15583	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
BNEFENCH_01854	3.21e-49	acpP	-	-	IQ	ko:K02078	-	ko00000,ko00001	Carrier of the growing fatty acid chain in fatty acid biosynthesis
BNEFENCH_01855	1.41e-241	plsX	2.3.1.15	-	I	ko:K03621	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
BNEFENCH_01856	0.0	recG	3.6.4.12	-	L	ko:K03655	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
BNEFENCH_01857	0.0	yloV	-	-	S	ko:K07030	-	ko00000	DAK2 domain fusion protein YloV
BNEFENCH_01858	5.83e-75	yloU	-	-	S	-	-	-	Asp23 family, cell envelope-related function
BNEFENCH_01859	2.29e-36	rpmB	-	-	J	ko:K02902	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL28 family
BNEFENCH_01860	2.62e-166	thiN	2.7.6.2	-	H	ko:K00949	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000	thiamine pyrophosphokinase
BNEFENCH_01861	4.16e-151	rpe	5.1.3.1	-	G	ko:K01783	ko00030,ko00040,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the ribulose-phosphate 3-epimerase family
BNEFENCH_01862	4.61e-220	rsgA	3.1.3.100	-	S	ko:K06949	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000,ko03009	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
BNEFENCH_01863	0.0	prkC	2.7.11.1	-	KLT	ko:K08884,ko:K12132	-	ko00000,ko01000,ko01001	serine threonine protein kinase
BNEFENCH_01864	5.22e-174	stp	3.1.3.16	-	T	ko:K20074	-	ko00000,ko01000,ko01009	phosphatase
BNEFENCH_01865	0.0	sun	2.1.1.176	-	J	ko:K03500	-	ko00000,ko01000,ko03009	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
BNEFENCH_01866	9.71e-226	fmt	2.1.2.9	-	J	ko:K00604	ko00670,ko00970,map00670,map00970	ko00000,ko00001,ko01000	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
BNEFENCH_01867	0.0	priA	-	-	L	ko:K04066	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
BNEFENCH_01868	1.38e-275	coaBC	4.1.1.36, 6.3.2.5	-	H	ko:K01598,ko:K13038	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
BNEFENCH_01869	1.77e-47	rpoZ	2.7.7.6	-	K	ko:K03060	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
BNEFENCH_01870	2.52e-148	gmk	2.7.4.8	-	F	ko:K00942	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko00002,ko01000	Essential for recycling GMP and indirectly, cGMP
BNEFENCH_01871	2.34e-117	-	-	-	S	ko:K07001	-	ko00000	Patatin-like phospholipase
BNEFENCH_01872	1.57e-65	-	-	-	-	-	-	-	-
BNEFENCH_01874	0.0	recN	-	-	L	ko:K03631	-	ko00000,ko03400	May be involved in recombinational repair of damaged DNA
BNEFENCH_01875	4.19e-96	argR2	-	-	K	ko:K03402	-	ko00000,ko03000	Regulates arginine biosynthesis genes
BNEFENCH_01876	8.09e-197	rrmJ	2.1.1.226, 2.1.1.227	-	J	ko:K06442	-	ko00000,ko01000,ko03009	Ribosomal RNA large subunit methyltransferase J
BNEFENCH_01877	3.67e-189	ispA	2.5.1.1, 2.5.1.10, 2.5.1.29	-	H	ko:K13789	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko01006	Belongs to the FPP GGPP synthase family
BNEFENCH_01878	1.42e-43	xseB	3.1.11.6	-	L	ko:K03602	ko03430,map03430	ko00000,ko00001,ko01000,ko03400	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
BNEFENCH_01879	3.14e-295	xseA	3.1.11.6	-	L	ko:K03601	ko03430,map03430	ko00000,ko00001,ko01000,ko03400	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
BNEFENCH_01880	1.05e-191	folD	1.5.1.5, 3.5.4.9	-	F	ko:K01491	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
BNEFENCH_01881	6.72e-88	nusB	-	-	K	ko:K03625	-	ko00000,ko03009,ko03021	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
BNEFENCH_01882	9.44e-99	WQ51_04310	-	-	S	ko:K10947	-	ko00000,ko03000	Asp23 family, cell envelope-related function
BNEFENCH_01883	6.06e-132	efp	-	-	J	ko:K02356	-	ko00000,ko03012	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
BNEFENCH_01885	3.55e-258	pepP	3.4.11.9, 3.4.13.9	-	E	ko:K01262,ko:K01271	-	ko00000,ko01000,ko01002	Creatinase/Prolidase N-terminal domain
BNEFENCH_01886	1.6e-63	rpmA	-	-	J	ko:K02899	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL27 family
BNEFENCH_01887	1.77e-74	ysxB	-	-	J	ko:K07584	-	ko00000	Cysteine protease Prp
BNEFENCH_01888	5.83e-67	rplU	-	-	J	ko:K02888	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein binds to 23S rRNA in the presence of protein L20
BNEFENCH_01889	1.17e-16	-	-	-	-	-	-	-	-
BNEFENCH_01892	0.0	pepX	3.4.14.11	-	E	ko:K01281	-	ko00000,ko01000,ko01002	Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
BNEFENCH_01893	0.0	glnA	6.3.1.2	-	E	ko:K01915	ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727	ko00000,ko00001,ko01000,ko04147	glutamine synthetase
BNEFENCH_01894	1.32e-80	glnR	-	-	K	ko:K03713,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000,ko03000	Transcriptional regulator
BNEFENCH_01895	0.0	speA	4.1.1.17, 4.1.1.18, 4.1.1.19	-	E	ko:K01581,ko:K01582,ko:K01585	ko00310,ko00330,ko00480,ko00960,ko01100,ko01110,ko01130,map00310,map00330,map00480,map00960,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Orn/Lys/Arg decarboxylase, C-terminal domain
BNEFENCH_01896	1.65e-304	ynbB	-	-	P	-	-	-	aluminum resistance
BNEFENCH_01897	6.3e-222	miaA	2.5.1.75	-	F	ko:K00791	ko00908,ko01100,ko01110,map00908,map01100,map01110	ko00000,ko00001,ko01000,ko01006,ko03016	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
BNEFENCH_01898	3.33e-35	WQ51_02665	-	-	S	-	-	-	Protein of unknown function (DUF3042)
BNEFENCH_01899	1.93e-96	yqhL	-	-	P	-	-	-	Rhodanese-like protein
BNEFENCH_01900	1.13e-228	glcK	2.7.1.2	-	G	ko:K00845	ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Glucokinase
BNEFENCH_01901	3.93e-54	yqgQ	-	-	S	-	-	-	Bacterial protein of unknown function (DUF910)
BNEFENCH_01902	1.33e-157	gluP	3.4.21.105	-	S	ko:K19225	-	ko00000,ko01000,ko01002	Peptidase, S54 family
BNEFENCH_01903	0.0	pbp2b	-	-	M	ko:K00687,ko:K12553,ko:K21465,ko:K21466	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01011	Penicillin-binding Protein
BNEFENCH_01904	0.0	-	-	-	S	-	-	-	Bacterial membrane protein YfhO
BNEFENCH_01905	1.15e-71	yneR	-	-	S	-	-	-	Belongs to the HesB IscA family
BNEFENCH_01906	2.04e-149	vraR	-	-	K	ko:K07694,ko:K11618	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	helix_turn_helix, Lux Regulon
BNEFENCH_01907	3.81e-231	vraS	2.7.13.3	-	T	ko:K07681,ko:K11617	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
BNEFENCH_01908	1.1e-164	yvqF	-	-	S	ko:K11622	ko02020,map02020	ko00000,ko00001	Cell wall-active antibiotics response 4TMS YvqF
BNEFENCH_01909	1.05e-101	greA	-	-	K	ko:K03624	-	ko00000,ko03021	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
BNEFENCH_01910	3.43e-148	udk	2.7.1.48	-	F	ko:K00876	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	Cytidine monophosphokinase
BNEFENCH_01911	4.36e-264	mltG	-	-	S	ko:K07082	-	ko00000	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
BNEFENCH_01912	0.0	pheT	6.1.1.20	-	J	ko:K01890	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
BNEFENCH_01913	3.55e-259	pheS	6.1.1.20	-	J	ko:K01889	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
BNEFENCH_01914	1.2e-87	yodB	-	-	K	-	-	-	Transcriptional regulator, HxlR family
BNEFENCH_01915	3.09e-122	XK27_09705	-	-	S	ko:K06950	-	ko00000	Metal dependent phosphohydrolases with conserved 'HD' motif.
BNEFENCH_01916	4.47e-178	spoU	-	-	J	ko:K03437	-	ko00000,ko03016	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
BNEFENCH_01917	4.17e-60	acyP	3.6.1.7	-	C	ko:K01512	ko00620,ko00627,ko01120,map00620,map00627,map01120	ko00000,ko00001,ko01000	Belongs to the acylphosphatase family
BNEFENCH_01918	2.58e-228	yidC	-	-	U	ko:K03217	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044,ko03029	Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
BNEFENCH_01919	0.0	arlS	2.7.13.3	-	T	ko:K18940	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
BNEFENCH_01920	1.01e-157	csrR	-	-	K	-	-	-	response regulator
BNEFENCH_01921	0.0	gnd	1.1.1.343, 1.1.1.44	-	H	ko:K00033	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
BNEFENCH_01922	1.41e-52	-	-	-	S	-	-	-	Psort location Cytoplasmic, score
BNEFENCH_01923	9e-127	ylbN	-	-	S	ko:K07040	-	ko00000	Uncharacterized ACR, COG1399
BNEFENCH_01924	3.76e-267	ylbM	-	-	S	-	-	-	Belongs to the UPF0348 family
BNEFENCH_01925	6.9e-178	yccK	-	-	Q	-	-	-	ubiE/COQ5 methyltransferase family
BNEFENCH_01926	1.18e-78	rsfS	-	-	J	ko:K09710	-	ko00000,ko03009	Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
BNEFENCH_01927	3.21e-142	yqeK	-	-	H	-	-	-	Hydrolase, HD family
BNEFENCH_01928	2.72e-157	nadD	2.7.7.18	-	H	ko:K00969	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
BNEFENCH_01929	3.95e-65	yhbY	-	-	J	ko:K07574	-	ko00000,ko03009	RNA-binding protein
BNEFENCH_01930	2.04e-260	yqeH	-	-	S	ko:K06948	-	ko00000,ko03009	Ribosome biogenesis GTPase YqeH
BNEFENCH_01931	6.63e-127	yqeG	-	-	S	ko:K07015	-	ko00000	HAD phosphatase, family IIIA
BNEFENCH_01932	6.81e-221	ykcA	-	-	E	-	-	-	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
BNEFENCH_01933	5.53e-243	mhqA_2	-	-	E	ko:K15975	-	ko00000	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
BNEFENCH_01934	2.14e-157	mhqD	-	-	S	ko:K06999	-	ko00000	Dienelactone hydrolase family
BNEFENCH_01935	5.03e-230	-	-	-	C	-	-	-	Alcohol dehydrogenase GroES-like domain
BNEFENCH_01936	2.37e-129	-	3.2.2.10	-	S	ko:K06966	ko00230,ko00240,map00230,map00240	ko00000,ko00001,ko01000	Belongs to the LOG family
BNEFENCH_01937	1.02e-74	rplT	-	-	J	ko:K02887	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
BNEFENCH_01938	1.13e-36	rpmI	-	-	J	ko:K02916	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL35 family
BNEFENCH_01939	7.46e-101	infC	-	-	J	ko:K02520	-	ko00000,ko03012,ko03029	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
BNEFENCH_01940	1.62e-165	-	-	-	S	-	-	-	SseB protein N-terminal domain
BNEFENCH_01941	5.3e-70	-	-	-	-	-	-	-	-
BNEFENCH_01942	1.27e-134	yrgI	5.4.2.11	-	G	ko:K01834	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Histidine phosphatase superfamily (branch 1)
BNEFENCH_01943	0.0	thrS	6.1.1.3	-	J	ko:K01868	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
BNEFENCH_01944	2.02e-219	dnaI	-	-	L	ko:K11144	-	ko00000,ko03032	Primosomal protein DnaI
BNEFENCH_01945	0.0	dnaB	-	-	L	ko:K03346	-	ko00000,ko03032	replication initiation and membrane attachment
BNEFENCH_01946	2.06e-103	nrdR	-	-	K	ko:K07738	-	ko00000,ko03000	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
BNEFENCH_01947	2.71e-130	coaE	2.7.1.24	-	F	ko:K00859	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
BNEFENCH_01948	2.07e-202	fpg	3.2.2.23, 4.2.99.18	-	L	ko:K10563	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
BNEFENCH_01949	0.0	polA	2.7.7.7	-	L	ko:K02335	ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440	ko00000,ko00001,ko01000,ko03032,ko03400	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
BNEFENCH_01950	4.93e-153	ybhL	-	-	S	ko:K06890	-	ko00000	Inhibitor of apoptosis-promoting Bax1
BNEFENCH_01951	0.0	murC	6.3.2.8	-	M	ko:K01924	ko00471,ko00550,ko01100,map00471,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Belongs to the MurCDEF family
BNEFENCH_01952	0.0	sftA	-	-	D	ko:K03466	-	ko00000,ko03036	Belongs to the FtsK SpoIIIE SftA family
BNEFENCH_01953	5.26e-148	XK27_10290	-	-	J	ko:K06878	-	ko00000	Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
BNEFENCH_01954	5.32e-73	ytpP	-	-	CO	-	-	-	Thioredoxin
BNEFENCH_01956	8.13e-157	trmB	2.1.1.33	-	J	ko:K03439	-	ko00000,ko01000,ko03016	Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
BNEFENCH_01957	3.71e-188	ytmP	-	-	M	-	-	-	Choline/ethanolamine kinase
BNEFENCH_01958	3.95e-273	ecsB	-	-	U	ko:K01992	-	ko00000,ko00002,ko02000	ABC transporter
BNEFENCH_01959	2.4e-172	ecsA	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
BNEFENCH_01960	2.56e-98	hit	-	-	FG	ko:K02503	-	ko00000,ko04147	histidine triad
BNEFENCH_01961	5.77e-81	-	-	-	S	-	-	-	YtxH-like protein
BNEFENCH_01962	5.26e-205	prsA	5.2.1.8	-	M	ko:K07533	-	ko00000,ko01000,ko03110	Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
BNEFENCH_01963	8.42e-232	yhaM	-	-	S	ko:K03698	-	ko00000,ko01000,ko03019	Metal dependent phosphohydrolases with conserved 'HD' motif.
BNEFENCH_01964	5.98e-72	-	-	-	S	-	-	-	Control of competence regulator ComK, YlbF/YmcA
BNEFENCH_01965	0.0	pbp2A	2.4.1.129, 3.4.16.4	GT51	M	ko:K12555	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01003,ko01011	penicillin-binding protein
BNEFENCH_01966	5.27e-198	rluA	5.4.99.23, 5.4.99.28, 5.4.99.29	-	J	ko:K06177,ko:K06180	-	ko00000,ko01000,ko03009,ko03016	Responsible for synthesis of pseudouridine from uracil
BNEFENCH_01967	3.31e-98	argR1	-	-	K	ko:K03402	-	ko00000,ko03000	Regulates arginine biosynthesis genes
BNEFENCH_01968	0.0	argS	6.1.1.19	-	J	ko:K01887	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Arginyl-tRNA synthetase
BNEFENCH_01970	1.97e-88	-	-	-	-	-	-	-	-
BNEFENCH_01971	1.16e-31	-	-	-	-	-	-	-	-
BNEFENCH_01972	1.23e-225	pyrD	1.3.5.2, 1.3.98.1	-	F	ko:K00226,ko:K00254	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of dihydroorotate to orotate
BNEFENCH_01973	0.0	glpQ4	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	phosphodiesterase
BNEFENCH_01974	1.44e-157	mecA	-	-	NOT	ko:K16511	-	ko00000	Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
BNEFENCH_01975	1.13e-89	spxA	-	-	K	ko:K16509	-	ko00000	Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
BNEFENCH_01976	5.44e-175	yhfI	-	-	S	-	-	-	Metallo-beta-lactamase superfamily
BNEFENCH_01977	7.88e-121	traP	1.14.99.57, 6.2.1.3	-	S	ko:K01897,ko:K21481	ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920	ko00000,ko00001,ko00002,ko01000,ko01004,ko04147	heme oxygenase (decyclizing) activity
BNEFENCH_01978	0.0	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter (permease)
BNEFENCH_01979	6.57e-177	-	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter
BNEFENCH_01980	1.57e-159	rrp1	-	-	K	ko:K02483	-	ko00000,ko02022	response regulator
BNEFENCH_01981	1.3e-261	-	-	-	T	ko:K19168	-	ko00000,ko02048	His Kinase A (phosphoacceptor) domain
BNEFENCH_01982	1.54e-141	nrdG	1.97.1.4	-	O	ko:K04068	-	ko00000,ko01000	Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
BNEFENCH_01983	0.0	copB	3.6.3.3, 3.6.3.4, 3.6.3.5	-	P	ko:K01533,ko:K01534	-	ko00000,ko01000	P-type ATPase
BNEFENCH_01984	1.37e-99	copR	-	-	K	ko:K02171	ko01501,map01501	ko00000,ko00001,ko00002,ko01504,ko03000	Copper transport repressor CopY TcrY
BNEFENCH_01985	1.06e-297	purD	6.3.4.13	-	F	ko:K01945	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the GARS family
BNEFENCH_01986	0.0	purH	2.1.2.3, 3.5.4.10	-	F	ko:K00602	ko00230,ko00670,ko01100,ko01110,ko01130,ko01523,map00230,map00670,map01100,map01110,map01130,map01523	ko00000,ko00001,ko00002,ko01000,ko04147	Bifunctional purine biosynthesis protein PurH
BNEFENCH_01987	9.63e-130	purN	2.1.2.2	-	F	ko:K11175	ko00230,ko00670,ko01100,ko01110,ko01130,map00230,map00670,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
BNEFENCH_01988	3.28e-233	purM	6.3.3.1	-	F	ko:K01933	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Phosphoribosylformylglycinamidine cyclo-ligase
BNEFENCH_01989	0.0	purF	2.4.2.14	-	F	ko:K00764	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko01002	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
BNEFENCH_01990	0.0	purL	6.3.5.3	-	F	ko:K01952	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
BNEFENCH_01991	1.63e-163	purQ	6.3.5.3	-	F	ko:K01952	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
BNEFENCH_01992	3.46e-54	purS	6.3.5.3	-	F	ko:K01952	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
BNEFENCH_01993	4.48e-170	purC	6.3.2.6	-	F	ko:K01923	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the SAICAR synthetase family
BNEFENCH_01994	6.78e-271	purK	6.3.4.18	-	F	ko:K01589	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
BNEFENCH_01995	2.66e-102	purE	5.4.99.18	-	F	ko:K01588	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
BNEFENCH_01996	3.87e-135	thiT	-	-	S	ko:K16789	-	ko00000,ko02000	Thiamine transporter protein (Thia_YuaJ)
BNEFENCH_01997	0.0	iolT	-	-	EGP	ko:K06609	-	ko00000,ko02000	Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family
BNEFENCH_01998	0.0	ptsI	2.7.3.9	-	G	ko:K08483	ko02060,map02060	ko00000,ko00001,ko01000,ko02000	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
BNEFENCH_01999	1.02e-51	ptsH	-	-	G	ko:K11189	-	ko00000,ko02000	phosphocarrier protein HPR
BNEFENCH_02000	9.5e-39	-	-	-	-	-	-	-	-
BNEFENCH_02001	0.0	clpE	-	-	O	ko:K03697,ko:K04086	-	ko00000,ko03110	Belongs to the ClpA ClpB family
BNEFENCH_02002	3.36e-61	XK27_09445	-	-	S	-	-	-	Domain of unknown function (DUF1827)
BNEFENCH_02004	0.0	prfC	-	-	J	ko:K02837	-	ko00000,ko03012	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
BNEFENCH_02005	1.22e-307	hlyX	-	-	S	ko:K03699	-	ko00000,ko02042	Transporter associated domain
BNEFENCH_02006	2.41e-261	yueF	-	-	S	-	-	-	AI-2E family transporter
BNEFENCH_02007	4.61e-97	yjcF	-	-	S	-	-	-	Acetyltransferase (GNAT) domain
BNEFENCH_02008	3.19e-122	-	-	-	-	-	-	-	-
BNEFENCH_02009	2.23e-134	ygaC	-	-	J	ko:K07586	-	ko00000	Belongs to the UPF0374 family
BNEFENCH_02010	2.67e-180	recX	-	-	S	ko:K03565	-	ko00000,ko03400	Regulatory protein RecX
BNEFENCH_02011	0.0	frvR	-	-	K	ko:K02538,ko:K03483,ko:K09685,ko:K18531	-	ko00000,ko03000	transcriptional antiterminator
BNEFENCH_02012	6.46e-83	-	-	-	-	-	-	-	-
BNEFENCH_02013	0.0	rumA_1	2.1.1.190, 2.1.1.35	-	J	ko:K00557,ko:K03215	-	ko00000,ko01000,ko03009,ko03016	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
BNEFENCH_02014	1.68e-103	-	-	-	F	-	-	-	Nucleoside 2-deoxyribosyltransferase
BNEFENCH_02015	3.85e-172	-	-	-	K	ko:K03489	-	ko00000,ko03000	UTRA
BNEFENCH_02016	0.0	bglA	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
BNEFENCH_02017	0.0	celD	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
BNEFENCH_02018	1.45e-103	-	-	-	-	-	-	-	-
BNEFENCH_02019	7.89e-66	celC	2.7.1.196, 2.7.1.205	-	G	ko:K02759	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIA subunit
BNEFENCH_02020	6.27e-67	ptcB	2.7.1.196, 2.7.1.205	-	G	ko:K02760	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
BNEFENCH_02021	0.0	poxL	1.2.3.3	-	EH	ko:K00158	ko00620,ko01100,map00620,map01100	ko00000,ko00001,ko01000	Belongs to the TPP enzyme family
BNEFENCH_02022	5.25e-279	mvaS	2.3.3.10	-	I	ko:K01641	ko00072,ko00280,ko00650,ko00900,ko01100,ko01110,ko01130,map00072,map00280,map00650,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Hydroxymethylglutaryl-CoA synthase
BNEFENCH_02023	4.66e-267	mvaA	1.1.1.88, 2.3.1.9	-	C	ko:K00054,ko:K00626	ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the HMG-CoA reductase family
BNEFENCH_02024	2.33e-264	atoB	1.1.1.88, 2.3.1.9	-	I	ko:K00054,ko:K00626	ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the thiolase family
BNEFENCH_02025	7.23e-66	-	-	-	-	-	-	-	-
BNEFENCH_02026	2.34e-205	-	-	-	G	-	-	-	Xylose isomerase domain protein TIM barrel
BNEFENCH_02027	4.44e-134	-	-	-	V	ko:K07448	-	ko00000,ko02048	Restriction endonuclease
BNEFENCH_02028	9.15e-201	-	5.1.3.3	-	G	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	converts alpha-aldose to the beta-anomer
BNEFENCH_02029	3.11e-271	-	3.5.1.18	-	E	ko:K01439	ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000	succinyl-diaminopimelate desuccinylase
BNEFENCH_02030	2.06e-130	-	-	-	S	-	-	-	ECF transporter, substrate-specific component
BNEFENCH_02032	5.69e-105	-	-	-	K	-	-	-	Acetyltransferase GNAT Family
BNEFENCH_02033	6.72e-111	ydcK	-	-	S	ko:K03095	-	ko00000	Belongs to the SprT family
BNEFENCH_02034	2.36e-167	XK27_08845	-	-	S	ko:K05833	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
BNEFENCH_02035	4.68e-187	XK27_08840	-	-	U	ko:K05832	-	ko00000,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
BNEFENCH_02036	1.43e-197	XK27_08835	-	-	S	ko:K01989	-	ko00000,ko00002,ko02000	ABC transporter
BNEFENCH_02038	5.58e-94	-	-	-	-	-	-	-	-
BNEFENCH_02039	0.0	pacL	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	P-type ATPase
BNEFENCH_02040	1.97e-277	-	-	-	V	-	-	-	Beta-lactamase
BNEFENCH_02041	3.41e-193	nadE	6.3.1.5	-	F	ko:K01916	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
BNEFENCH_02042	2.6e-279	-	-	-	V	-	-	-	Beta-lactamase
BNEFENCH_02043	0.0	pncB	6.3.4.21	-	F	ko:K00763	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
BNEFENCH_02044	1.62e-161	yvoA_2	-	-	K	ko:K03710	-	ko00000,ko03000	UbiC transcription regulator-associated domain protein
BNEFENCH_02045	7.45e-280	nagA	3.5.1.25	-	G	ko:K01443	ko00520,ko01130,map00520,map01130	ko00000,ko00001,ko01000	Belongs to the metallo-dependent hydrolases superfamily. NagA family
BNEFENCH_02046	7.6e-176	proC	1.5.1.2	-	E	ko:K00286	ko00330,ko01100,ko01110,ko01130,ko01230,map00330,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
BNEFENCH_02047	0.0	yuxL	3.4.19.1	-	E	ko:K01303	-	ko00000,ko01000,ko01002	Prolyl oligopeptidase family
BNEFENCH_02050	8.48e-203	-	-	-	S	-	-	-	Calcineurin-like phosphoesterase
BNEFENCH_02051	0.0	dtpT	-	-	U	ko:K03305	-	ko00000	amino acid peptide transporter
BNEFENCH_02052	0.0	-	-	-	V	ko:K02003,ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
BNEFENCH_02053	6.98e-87	-	-	-	-	-	-	-	-
BNEFENCH_02054	6.13e-100	-	-	-	S	-	-	-	function, without similarity to other proteins
BNEFENCH_02055	0.0	-	-	-	G	-	-	-	MFS/sugar transport protein
BNEFENCH_02056	7.56e-292	-	3.2.1.51	GH29	G	ko:K01206	ko00511,map00511	ko00000,ko00001,ko01000,ko04147	Alpha-L-fucosidase
BNEFENCH_02057	3.32e-76	-	-	-	-	-	-	-	-
BNEFENCH_02058	0.0	pckA	4.1.1.49	-	C	ko:K01610	ko00010,ko00020,ko00620,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00710,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Phosphoenolpyruvate carboxykinase
BNEFENCH_02059	6.28e-25	-	-	-	S	-	-	-	Virus attachment protein p12 family
BNEFENCH_02060	0.0	feoB	-	-	P	ko:K04759	-	ko00000,ko02000	transporter of a GTP-driven Fe(2 ) uptake system
BNEFENCH_02061	8.35e-91	-	-	-	P	ko:K04758	-	ko00000,ko02000	FeoA
BNEFENCH_02062	8.24e-168	-	-	-	E	-	-	-	lipolytic protein G-D-S-L family
BNEFENCH_02065	4.34e-151	-	-	-	S	ko:K07118	-	ko00000	NAD(P)H-binding
BNEFENCH_02066	8.14e-79	-	-	-	S	-	-	-	MucBP domain
BNEFENCH_02067	9.73e-109	-	-	-	-	-	-	-	-
BNEFENCH_02069	1.89e-294	serS	6.1.1.11	-	J	ko:K01875	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
BNEFENCH_02070	0.0	-	-	-	K	-	-	-	Mga helix-turn-helix domain
BNEFENCH_02071	0.0	-	-	-	K	-	-	-	Mga helix-turn-helix domain
BNEFENCH_02072	0.0	lysP	-	-	E	ko:K03293,ko:K11733	-	ko00000,ko02000	amino acid
BNEFENCH_02074	2.4e-169	budA	4.1.1.5	-	Q	ko:K01575	ko00650,ko00660,map00650,map00660	ko00000,ko00001,ko01000	Alpha-acetolactate decarboxylase
BNEFENCH_02075	0.0	alsS	2.2.1.6	-	EH	ko:K01652	ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the TPP enzyme family
BNEFENCH_02076	4.81e-127	-	-	-	-	-	-	-	-
BNEFENCH_02077	8.44e-128	yjcK	2.3.1.128	-	J	ko:K03790	-	ko00000,ko01000,ko03009	Acetyltransferase (GNAT) domain
BNEFENCH_02078	9.61e-246	-	-	-	S	-	-	-	Protein of unknown function C-terminal (DUF3324)
BNEFENCH_02079	8.02e-114	-	-	-	-	-	-	-	-
BNEFENCH_02080	1.43e-25	rpmG	-	-	J	ko:K02913	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL33 family
BNEFENCH_02081	5.98e-150	sodA	1.15.1.1	-	C	ko:K04564	ko04013,ko04068,ko04146,ko04211,ko04212,ko04213,ko05016,map04013,map04068,map04146,map04211,map04212,map04213,map05016	ko00000,ko00001,ko01000	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
BNEFENCH_02082	3.2e-201	yjbO	5.4.99.23	-	J	ko:K06180	-	ko00000,ko01000,ko03009	Responsible for synthesis of pseudouridine from uracil
BNEFENCH_02083	1.25e-201	-	-	-	I	-	-	-	alpha/beta hydrolase fold
BNEFENCH_02084	6.45e-41	-	-	-	-	-	-	-	-
BNEFENCH_02085	7.43e-97	-	-	-	-	-	-	-	-
BNEFENCH_02086	6.65e-198	citG	2.4.2.52	-	H	ko:K05966	ko02020,map02020	ko00000,ko00001,ko01000	2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase
BNEFENCH_02087	4.14e-163	citR	-	-	K	-	-	-	FCD
BNEFENCH_02088	0.0	oadA	4.1.1.3	-	C	ko:K01571	ko00620,ko01100,map00620,map01100	ko00000,ko00001,ko01000,ko02000	Conserved carboxylase domain
BNEFENCH_02089	1.89e-120	citX	2.7.7.61	-	HI	ko:K05964	ko02020,map02020	ko00000,ko00001,ko01000	Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase
BNEFENCH_02090	0.0	citF	2.8.3.10	-	H	ko:K01643	ko02020,map02020	ko00000,ko00001,ko01000	Citrate (pro-3S)-lyase alpha chain
BNEFENCH_02091	7.46e-201	citE	4.1.3.34	-	G	ko:K01644	ko02020,map02020	ko00000,ko00001,ko01000	Belongs to the HpcH HpaI aldolase family
BNEFENCH_02092	3.41e-65	citD	-	-	C	ko:K01646	ko02020,map02020	ko00000,ko00001	Covalent carrier of the coenzyme of citrate lyase
BNEFENCH_02093	1.28e-229	citC	6.2.1.22	-	H	ko:K01910	ko02020,map02020	ko00000,ko00001,ko01000	Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
BNEFENCH_02094	3.26e-07	-	-	-	-	-	-	-	-
BNEFENCH_02095	1.13e-250	oadB	4.1.1.3	-	C	ko:K01572	ko00620,ko01100,map00620,map01100	ko00000,ko00001,ko01000,ko02000	Na+-transporting oxaloacetate decarboxylase beta subunit
BNEFENCH_02096	2.06e-60	oadG	-	-	I	-	-	-	Biotin-requiring enzyme
BNEFENCH_02097	9.08e-71	-	-	-	-	-	-	-	-
BNEFENCH_02098	1.43e-307	citM	-	-	C	ko:K03300	-	ko00000	Citrate transporter
BNEFENCH_02099	3.61e-55	-	-	-	-	-	-	-	-
BNEFENCH_02100	2.68e-135	kptA	-	-	J	ko:K07559	-	ko00000,ko01000,ko03016	Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP- ribose 1''-2''-cyclic phosphate (APPR P). May function as an ADP- ribosylase
BNEFENCH_02101	2.1e-114	-	-	-	K	-	-	-	GNAT family
BNEFENCH_02102	3.85e-137	-	1.5.1.40	-	S	ko:K06988	-	ko00000,ko01000	NADP oxidoreductase coenzyme F420-dependent
BNEFENCH_02103	1.13e-75	padR	-	-	K	ko:K10947	-	ko00000,ko03000	Transcriptional regulator PadR-like family
BNEFENCH_02104	2e-112	ORF00048	-	-	-	-	-	-	-
BNEFENCH_02105	1.43e-173	nfrA	1.5.1.38	-	C	ko:K19285	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	nitroreductase
BNEFENCH_02106	2.75e-214	ybhF_1	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter
BNEFENCH_02107	0.0	-	-	-	M	ko:K01992	-	ko00000,ko00002,ko02000	Exporter of polyketide antibiotics
BNEFENCH_02108	9.83e-148	-	-	-	K	ko:K09017	-	ko00000,ko03000	Transcriptional regulator
BNEFENCH_02109	0.0	-	-	-	EGP	-	-	-	Major Facilitator
BNEFENCH_02110	1.65e-160	-	-	-	S	ko:K07090	-	ko00000	membrane transporter protein
BNEFENCH_02111	7.12e-232	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
BNEFENCH_02112	4.73e-209	-	-	-	S	-	-	-	Alpha beta hydrolase
BNEFENCH_02113	2.73e-80	lexA	-	-	K	ko:K07979	-	ko00000,ko03000	Transcriptional regulator, GntR family
BNEFENCH_02114	5.6e-162	yhcG	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
BNEFENCH_02115	1.32e-15	-	-	-	-	-	-	-	-
BNEFENCH_02116	1.77e-174	-	-	-	-	-	-	-	-
BNEFENCH_02117	1.5e-112	-	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
BNEFENCH_02118	2.48e-123	ydaF	-	-	J	ko:K03817	-	ko00000,ko01000,ko03009	Acetyltransferase (GNAT) domain
BNEFENCH_02119	7.79e-203	-	-	-	P	ko:K10823	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Oligopeptide/dipeptide transporter, C-terminal region
BNEFENCH_02120	1.61e-253	-	-	-	P	ko:K15583	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Oligopeptide/dipeptide transporter, C-terminal region
BNEFENCH_02122	1.08e-222	-	-	-	EP	ko:K02034,ko:K15582	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	COG1173 ABC-type dipeptide oligopeptide nickel transport systems, permease components
BNEFENCH_02123	1.2e-214	-	-	-	P	ko:K15581	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
BNEFENCH_02124	0.0	-	-	-	E	ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding proteins, family 5 Middle
BNEFENCH_02125	5.31e-125	-	-	-	S	-	-	-	DJ-1/PfpI family
BNEFENCH_02126	2.12e-70	-	-	-	K	-	-	-	Transcriptional
BNEFENCH_02127	3.73e-49	-	-	-	-	-	-	-	-
BNEFENCH_02128	0.0	-	-	-	V	-	-	-	ABC transporter transmembrane region
BNEFENCH_02129	1.57e-274	-	-	-	V	ko:K06147,ko:K06148,ko:K11085,ko:K18889	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter transmembrane region
BNEFENCH_02131	1.32e-88	-	-	-	S	-	-	-	Iron-sulphur cluster biosynthesis
BNEFENCH_02132	3.05e-19	-	2.7.1.39	-	S	ko:K02204	ko00260,ko01100,ko01110,ko01120,ko01230,map00260,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Phosphotransferase enzyme family
BNEFENCH_02133	0.0	-	-	-	M	-	-	-	LysM domain
BNEFENCH_02134	1.95e-172	zmp3	-	-	O	-	-	-	Zinc-dependent metalloprotease
BNEFENCH_02135	0.0	guaA	6.3.5.2	-	F	ko:K01951	ko00230,ko00983,ko01100,map00230,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko01002	Catalyzes the synthesis of GMP from XMP
BNEFENCH_02136	6.6e-228	coaA	2.7.1.33	-	F	ko:K00867	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Pantothenic acid kinase
BNEFENCH_02138	5.62e-55	-	-	-	-	-	-	-	-
BNEFENCH_02139	0.0	pepDA	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
BNEFENCH_02140	5.02e-110	ykhA	3.1.2.20	-	I	ko:K01073	-	ko00000,ko01000	Thioesterase superfamily
BNEFENCH_02141	0.0	helD	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	DNA helicase
BNEFENCH_02142	4.33e-29	-	-	-	-	-	-	-	-
BNEFENCH_02143	0.0	yjbQ	-	-	P	ko:K03455,ko:K03499	-	ko00000,ko02000	TrkA C-terminal domain protein
BNEFENCH_02144	1.97e-230	pepR	3.4.11.5	-	E	ko:K01259	ko00330,map00330	ko00000,ko00001,ko01000,ko01002	Releases the N-terminal proline from various substrates
BNEFENCH_02145	1.51e-104	yjhE	-	-	S	-	-	-	Phage tail protein
BNEFENCH_02146	2.2e-307	mntH	-	-	P	ko:K03322	-	ko00000,ko02000	H( )-stimulated, divalent metal cation uptake system
BNEFENCH_02147	1.16e-239	hemH	4.99.1.1, 4.99.1.9	-	H	ko:K01772	ko00860,ko01100,ko01110,map00860,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the ferrous insertion into protoporphyrin IX
BNEFENCH_02148	4.03e-164	gpm2	-	-	G	-	-	-	Phosphoglycerate mutase family
BNEFENCH_02149	0.0	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	FtsX-like permease family
BNEFENCH_02150	1.09e-173	cysA	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
BNEFENCH_02151	0.0	-	-	-	E	-	-	-	Amino Acid
BNEFENCH_02152	4.73e-209	-	-	-	I	-	-	-	Diacylglycerol kinase catalytic domain
BNEFENCH_02153	2.17e-302	hflX	-	-	S	ko:K03665	-	ko00000,ko03009	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
BNEFENCH_02154	2.51e-167	nodB3	-	-	G	-	-	-	Polysaccharide deacetylase
BNEFENCH_02155	1.99e-33	-	-	-	S	-	-	-	Acyltransferase family
BNEFENCH_02157	1.49e-58	-	-	-	-	-	-	-	-
BNEFENCH_02159	2.54e-110	-	-	-	S	-	-	-	Bacterial membrane protein, YfhO
BNEFENCH_02160	3.93e-126	-	-	-	V	-	-	-	Beta-lactamase
BNEFENCH_02161	2.5e-191	cps2D	5.1.3.2, 5.1.3.25	-	M	ko:K01784,ko:K17947	ko00052,ko00520,ko00523,ko01100,ko01130,map00052,map00520,map00523,map01100,map01130	ko00000,ko00001,ko00002,ko01000	RmlD substrate binding domain
BNEFENCH_02162	6.51e-141	glnP	-	-	P	ko:K10040	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
BNEFENCH_02163	1.44e-141	glnM	-	-	P	ko:K10040	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
BNEFENCH_02164	2.05e-189	glnH	-	-	ET	ko:K10039	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
BNEFENCH_02165	6.35e-174	glnQ	-	-	E	ko:K10041	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
BNEFENCH_02166	2.65e-223	-	-	-	-	-	-	-	-
BNEFENCH_02168	3.91e-109	zur	-	-	P	ko:K02076,ko:K03711	-	ko00000,ko03000	Belongs to the Fur family
BNEFENCH_02169	2.69e-14	-	-	-	-	-	-	-	-
BNEFENCH_02170	7.28e-144	gmk2	2.7.4.8	-	F	ko:K00942	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko00002,ko01000	Guanylate kinase
BNEFENCH_02171	2.85e-89	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
BNEFENCH_02172	1.55e-194	spl	-	-	M	ko:K21471	-	ko00000,ko01000,ko01002,ko01011	NlpC/P60 family
BNEFENCH_02173	3.13e-312	tyrS	6.1.1.1	-	J	ko:K01866	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
BNEFENCH_02174	1.32e-221	yeaB	-	-	P	-	-	-	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
BNEFENCH_02175	5.83e-73	-	-	-	K	-	-	-	helix_turn_helix, Arsenical Resistance Operon Repressor
BNEFENCH_02176	2.2e-222	apbE	2.7.1.180	-	H	ko:K03734	-	ko00000,ko01000	Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
BNEFENCH_02177	0.0	malZ	3.2.1.20, 3.2.1.41	CBM48,GH13,GH31	G	ko:K01187,ko:K01200	ko00052,ko00500,ko01100,ko01110,map00052,map00500,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 13 family
BNEFENCH_02178	0.0	glgP	2.4.1.1	GT35	G	ko:K00688	ko00500,ko01100,ko01110,ko02026,ko04217,ko04910,ko04922,ko04931,map00500,map01100,map01110,map02026,map04217,map04910,map04922,map04931	ko00000,ko00001,ko01000	Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
BNEFENCH_02179	0.0	glgA	2.4.1.21	GT5	F	ko:K00703	ko00500,ko01100,ko01110,ko02026,map00500,map01100,map01110,map02026	ko00000,ko00001,ko00002,ko01000,ko01003	Synthesizes alpha-1,4-glucan chains using ADP-glucose
BNEFENCH_02180	2.27e-253	glgD	2.7.7.27	-	G	ko:K00975	ko00500,ko00520,ko01100,ko01110,ko02026,map00500,map00520,map01100,map01110,map02026	ko00000,ko00001,ko00002,ko01000	Nucleotidyl transferase
BNEFENCH_02181	4.81e-255	glgC	2.7.7.27	-	H	ko:K00975	ko00500,ko00520,ko01100,ko01110,ko02026,map00500,map00520,map01100,map01110,map02026	ko00000,ko00001,ko00002,ko01000	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
BNEFENCH_02182	0.0	glgB	2.4.1.18	CBM48,GH13	G	ko:K00700	ko00500,ko01100,ko01110,map00500,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
BNEFENCH_02183	2.5e-261	ilvE	2.6.1.42	-	E	ko:K00826	ko00270,ko00280,ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00270,map00280,map00290,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Branched-chain amino acid aminotransferase
BNEFENCH_02184	4.28e-131	-	-	-	M	-	-	-	Sortase family
BNEFENCH_02185	3.79e-186	-	-	-	S	-	-	-	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BNEFENCH_02186	0.0	fbp	3.1.3.11	-	G	ko:K04041	ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	phosphatase activity
BNEFENCH_02187	1.94e-86	spx2	-	-	P	ko:K16509	-	ko00000	ArsC family
BNEFENCH_02188	0.0	clpE	-	-	O	ko:K03697,ko:K04086	-	ko00000,ko03110	associated with various cellular activities
BNEFENCH_02189	1.15e-185	ywqE	3.1.3.48	-	GM	ko:K01104	-	ko00000,ko01000	PHP domain protein
BNEFENCH_02190	2.02e-194	brpA	-	-	K	-	-	-	Cell envelope-like function transcriptional attenuator common domain protein
BNEFENCH_02191	1.56e-05	tnpA1	-	-	L	-	-	-	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
BNEFENCH_02192	1.11e-300	-	-	-	L	ko:K07485	-	ko00000	Transposase
BNEFENCH_02193	7.78e-96	rfbP	-	-	M	ko:K13012,ko:K19428	-	ko00000,ko01000,ko01005	Bacterial sugar transferase
BNEFENCH_02194	1.62e-54	-	-	-	M	-	-	-	Glycosyl transferase 4-like
BNEFENCH_02195	1.77e-134	ywqD	-	-	D	-	-	-	Capsular exopolysaccharide family
BNEFENCH_02196	9.13e-160	epsB	-	-	M	-	-	-	biosynthesis protein
BNEFENCH_02197	3.86e-165	rfbB	4.2.1.46	-	M	ko:K01710	ko00521,ko00523,ko00525,ko01055,ko01130,map00521,map00523,map00525,map01055,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
BNEFENCH_02198	3.68e-170	-	-	-	E	-	-	-	lipolytic protein G-D-S-L family
BNEFENCH_02199	6.97e-105	ccl	-	-	S	-	-	-	QueT transporter
BNEFENCH_02200	3.64e-160	fabG	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Enoyl-(Acyl carrier protein) reductase
BNEFENCH_02201	2.1e-49	XK27_01315	-	-	S	-	-	-	Protein of unknown function (DUF2829)
BNEFENCH_02202	5.4e-63	-	-	-	K	-	-	-	sequence-specific DNA binding
BNEFENCH_02203	2.15e-151	gpm5	-	-	G	-	-	-	Phosphoglycerate mutase family
BNEFENCH_02204	3.15e-230	oppF	-	-	P	ko:K10823	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
BNEFENCH_02205	4.99e-251	oppD	-	-	P	ko:K02031,ko:K15583	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
BNEFENCH_02206	3.01e-227	oppC	-	-	EP	ko:K15582	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BNEFENCH_02207	1.4e-208	oppB	-	-	P	ko:K15581	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BNEFENCH_02208	0.0	oppA	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
BNEFENCH_02209	0.0	-	-	-	EGP	-	-	-	Major Facilitator Superfamily
BNEFENCH_02210	4.1e-130	efp	-	-	J	ko:K02356	-	ko00000,ko03012	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
BNEFENCH_02211	1.9e-170	lutC	-	-	S	ko:K00782	-	ko00000	LUD domain
BNEFENCH_02212	0.0	lutB	-	-	C	ko:K18929	-	ko00000	4Fe-4S dicluster domain
BNEFENCH_02213	8.08e-189	lutA	-	-	C	ko:K18928	-	ko00000	Cysteine-rich domain
BNEFENCH_02214	2.39e-109	-	-	-	-	-	-	-	-
BNEFENCH_02215	1.09e-68	-	2.7.1.196, 2.7.1.205	-	G	ko:K02759	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphotransferase system cellobiose-specific component IIA
BNEFENCH_02216	2.09e-267	ybhE	-	-	S	ko:K09963	-	ko00000	Bacterial protein of unknown function (DUF871)
BNEFENCH_02217	1.89e-89	-	-	-	S	-	-	-	Domain of unknown function (DUF3284)
BNEFENCH_02219	1.24e-173	-	-	-	L	-	-	-	Transposase IS66 family
BNEFENCH_02220	3.59e-138	-	-	-	L	-	-	-	Transposase IS66 family
BNEFENCH_02221	2.15e-65	-	-	-	L	ko:K07484	-	ko00000	IS66 Orf2 like protein
BNEFENCH_02222	1.07e-14	-	-	-	-	-	-	-	-
BNEFENCH_02223	0.0	chbC	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
BNEFENCH_02224	0.0	galA	3.2.1.22	-	G	ko:K07407	ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603	ko00000,ko00001,ko01000	alpha-galactosidase
BNEFENCH_02225	7.42e-174	XK27_08125	-	-	S	ko:K09861	-	ko00000	Belongs to the UPF0246 family
BNEFENCH_02226	1.68e-175	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2087)
BNEFENCH_02227	0.0	-	3.1.11.5	-	L	ko:K03581	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Helix-hairpin-helix containing domain
BNEFENCH_02228	3.57e-102	-	-	-	-	-	-	-	-
BNEFENCH_02229	1.07e-75	-	-	-	S	-	-	-	WxL domain surface cell wall-binding
BNEFENCH_02230	2.79e-185	frlD1	2.7.1.218	-	G	ko:K10710	-	ko00000,ko01000	pfkB family carbohydrate kinase
BNEFENCH_02231	8.49e-62	hyuA	-	-	EQ	-	-	-	Hydantoinase/oxoprolinase N-terminal region
BNEFENCH_02232	3.73e-173	-	-	-	-	-	-	-	-
BNEFENCH_02233	0.0	-	-	-	S	-	-	-	Protein of unknown function (DUF1524)
BNEFENCH_02234	0.000159	hsdS	3.1.21.3	-	V	ko:K01154	-	ko00000,ko01000,ko02048	type I restriction modification DNA specificity domain
BNEFENCH_02235	1.89e-213	hsdM	2.1.1.72	-	V	ko:K03427	-	ko00000,ko01000,ko02048	type I restriction-modification system
BNEFENCH_02236	0.0	hsdR	3.1.21.3	-	V	ko:K01153	-	ko00000,ko01000,ko02048	Subunit R is required for both nuclease and ATPase activities, but not for modification
BNEFENCH_02237	7.43e-97	-	-	-	-	-	-	-	-
BNEFENCH_02238	2.13e-200	-	-	-	-	-	-	-	-
BNEFENCH_02239	1.98e-47	-	-	-	-	-	-	-	-
BNEFENCH_02240	0.0	pts26BCA	2.7.1.211	-	G	ko:K02808,ko:K02809,ko:K02810	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
BNEFENCH_02241	0.0	malL	3.2.1.20	GH31	G	ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Alpha amylase, catalytic domain protein
BNEFENCH_02242	1.44e-230	purR2	-	-	K	ko:K02529	-	ko00000,ko03000	Periplasmic binding proteins and sugar binding domain of LacI family
BNEFENCH_02243	0.0	scrB	3.2.1.26	GH32	G	ko:K01193	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	invertase
BNEFENCH_02244	3.47e-210	-	-	-	GM	-	-	-	NmrA-like family
BNEFENCH_02245	3.95e-297	cfa	2.1.1.79	-	M	ko:K00574	-	ko00000,ko01000	cyclopropane-fatty-acyl-phospholipid synthase
BNEFENCH_02246	1.33e-181	accA	2.1.3.15, 6.4.1.2	-	I	ko:K01962	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002,ko01000	alpha subunit
BNEFENCH_02247	1.24e-193	accD	2.1.3.15, 6.4.1.2	-	I	ko:K01963	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002,ko01000	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
BNEFENCH_02248	0.0	accC	6.3.4.14, 6.4.1.2	-	I	ko:K01961	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002,ko01000	Acetyl-CoA carboxylase biotin carboxylase subunit
BNEFENCH_02249	3.23e-98	fabZ	4.2.1.59	-	I	ko:K02372	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
BNEFENCH_02250	8.8e-93	accB	-	-	I	ko:K02160	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002	first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
BNEFENCH_02251	5.73e-283	fabF	2.3.1.179	-	I	ko:K09458	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
BNEFENCH_02252	6.79e-163	fabG	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	reductase
BNEFENCH_02253	8.45e-210	fabD	2.3.1.39	-	I	ko:K00645,ko:K15327,ko:K15329	ko00061,ko00333,ko01100,ko01130,ko01212,map00061,map00333,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004,ko01008	Malonyl CoA-acyl carrier protein transacylase
BNEFENCH_02254	4.56e-220	fabK	1.3.1.9	-	S	ko:K02371	ko00061,ko01100,ko01212,map00061,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Nitronate monooxygenase
BNEFENCH_02255	1.38e-45	acpP	-	-	IQ	ko:K02078	-	ko00000,ko00001	Carrier of the growing fatty acid chain in fatty acid biosynthesis
BNEFENCH_02256	3.96e-226	fabH	2.3.1.180	-	I	ko:K00648	ko00061,ko01100,ko01212,map00061,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
BNEFENCH_02257	2.44e-99	-	-	-	K	-	-	-	Winged helix DNA-binding domain
BNEFENCH_02258	4.59e-93	-	4.2.1.59	-	I	ko:K02372	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	FabA-like domain
BNEFENCH_02259	2.44e-244	-	-	-	E	-	-	-	Alpha/beta hydrolase family
BNEFENCH_02260	2.17e-287	-	-	-	C	-	-	-	Iron-containing alcohol dehydrogenase
BNEFENCH_02261	2.84e-63	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2316)
BNEFENCH_02262	1.92e-88	-	-	-	K	ko:K18909	-	ko00000,ko00002,ko01504,ko03000	MarR family
BNEFENCH_02263	5.76e-14	tcaA	-	-	S	ko:K21463	-	ko00000	response to antibiotic
BNEFENCH_02264	7.17e-216	-	-	-	S	-	-	-	Putative esterase
BNEFENCH_02265	7.12e-254	-	-	-	-	-	-	-	-
BNEFENCH_02266	2.09e-136	-	-	-	K	-	-	-	Transcriptional regulator, MarR family
BNEFENCH_02267	0.0	lmrA	3.6.3.44	-	V	ko:K02021,ko:K18104	ko01501,ko02010,map01501,map02010	ko00000,ko00001,ko00002,ko01000,ko01504,ko02000	ABC transporter
BNEFENCH_02268	8.02e-107	-	-	-	F	-	-	-	NUDIX domain
BNEFENCH_02269	1.91e-167	gpmA	5.4.2.11	-	G	ko:K01834	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
BNEFENCH_02270	4.74e-30	-	-	-	-	-	-	-	-
BNEFENCH_02271	8.98e-209	-	-	-	S	-	-	-	zinc-ribbon domain
BNEFENCH_02272	2.41e-261	pbpX	-	-	V	-	-	-	Beta-lactamase
BNEFENCH_02273	4.01e-240	ydbI	-	-	K	-	-	-	AI-2E family transporter
BNEFENCH_02274	4.31e-166	srtA	3.4.22.70	-	M	ko:K07284	-	ko00000,ko01000,ko01002,ko01011	Sortase family
BNEFENCH_02275	8.13e-85	gtcA2	-	-	S	-	-	-	Teichoic acid glycosylation protein
BNEFENCH_02276	2.38e-222	-	-	-	I	-	-	-	Diacylglycerol kinase catalytic domain
BNEFENCH_02277	0.0	-	1.2.3.3	-	EH	ko:K00158	ko00620,ko01100,map00620,map01100	ko00000,ko00001,ko01000	Belongs to the TPP enzyme family
BNEFENCH_02278	3.51e-216	gbuC	-	-	E	ko:K02001,ko:K02002	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	glycine betaine
BNEFENCH_02279	5.82e-189	gbuB	-	-	E	ko:K02001	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	glycine betaine
BNEFENCH_02280	9.19e-285	gbuA	3.6.3.32	-	E	ko:K02000	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	glycine betaine
BNEFENCH_02281	1.39e-176	sfsA	-	-	S	ko:K06206	-	ko00000	Belongs to the SfsA family
BNEFENCH_02282	2.6e-96	usp1	-	-	T	-	-	-	Universal stress protein family
BNEFENCH_02283	0.0	yxbA	6.3.1.12	-	S	ko:K17810	-	ko00000,ko01000	ATP-grasp enzyme
BNEFENCH_02284	1.23e-192	thrB	2.7.1.39	-	F	ko:K00872	ko00260,ko01100,ko01110,ko01120,ko01230,map00260,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
BNEFENCH_02285	0.0	thrC	4.2.3.1	-	E	ko:K01733	ko00260,ko00750,ko01100,ko01110,ko01120,ko01230,map00260,map00750,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Threonine synthase
BNEFENCH_02286	4.59e-290	hom	1.1.1.3	-	E	ko:K00003	ko00260,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00270,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	homoserine dehydrogenase
BNEFENCH_02287	0.0	-	2.7.2.4	-	E	ko:K00928	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the aspartokinase family
BNEFENCH_02288	1.07e-268	floL	-	-	S	ko:K07192	ko04910,map04910	ko00000,ko00001,ko03036,ko04131,ko04147	SPFH domain / Band 7 family
BNEFENCH_02289	1.88e-51	-	-	-	-	-	-	-	-
BNEFENCH_02290	3.38e-219	pfoSR	-	-	S	ko:K07035	-	ko00000	Phosphotransferase system, EIIC
BNEFENCH_02291	2.39e-224	ldhD	1.1.1.28	-	CH	ko:K03778	ko00620,ko01120,map00620,map01120	ko00000,ko00001,ko01000	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BNEFENCH_02292	2.69e-276	aspC	2.6.1.57	-	E	ko:K00832,ko:K00841	ko00270,ko00300,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01230,map00270,map00300,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase
BNEFENCH_02293	3.74e-69	-	-	-	-	-	-	-	-
BNEFENCH_02294	9.39e-166	WQ51_05710	-	-	S	-	-	-	Mitochondrial biogenesis AIM24
BNEFENCH_02295	2.8e-94	-	-	-	FG	ko:K02503	-	ko00000,ko04147	Scavenger mRNA decapping enzyme C-term binding
BNEFENCH_02296	0.0	asnB	6.3.5.4	-	E	ko:K01953	ko00250,ko01100,ko01110,map00250,map01100,map01110	ko00000,ko00001,ko01000,ko01002	Asparagine synthase
BNEFENCH_02298	6.76e-116	-	-	-	P	ko:K05814	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC-type sugar transport systems, permease components
BNEFENCH_02299	4.95e-269	ugpC	3.6.3.20	-	E	ko:K05816,ko:K10112	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Belongs to the ABC transporter superfamily
BNEFENCH_02300	0.0	nadC2	6.3.4.21	-	F	ko:K00763	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
BNEFENCH_02301	1.09e-138	pncA	-	-	Q	-	-	-	Isochorismatase family
BNEFENCH_02302	5.44e-174	-	-	-	F	-	-	-	NUDIX domain
BNEFENCH_02303	3.41e-186	-	3.5.2.6	-	V	ko:K17836	ko00311,ko01130,ko01501,map00311,map01130,map01501	ko00000,ko00001,ko00002,ko01000,ko01504	Beta-lactamase enzyme family
BNEFENCH_02304	3.08e-243	ykfB	5.1.1.20	-	M	ko:K19802	-	ko00000,ko01000	Belongs to the mandelate racemase muconate lactonizing enzyme family
BNEFENCH_02305	6.03e-247	-	-	-	V	-	-	-	Beta-lactamase
BNEFENCH_02306	1.43e-197	murQ	4.2.1.126	-	G	ko:K07106	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
BNEFENCH_02307	3.72e-210	-	-	-	K	-	-	-	Helix-turn-helix domain, rpiR family
BNEFENCH_02308	1.37e-104	-	2.7.1.191	-	G	ko:K02794	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system sorbose subfamily IIB component
BNEFENCH_02309	1.56e-192	-	-	-	G	ko:K02796	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	PTS system mannose/fructose/sorbose family IID component
BNEFENCH_02310	8.76e-177	XK27_08455	-	-	G	ko:K02795	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	PTS system sorbose-specific iic component
BNEFENCH_02311	1.02e-226	-	-	-	S	-	-	-	endonuclease exonuclease phosphatase family protein
BNEFENCH_02312	7.92e-192	-	-	-	S	-	-	-	Putative transposase
BNEFENCH_02313	8.89e-218	nrnA	3.1.13.3, 3.1.3.7	-	S	ko:K06881	ko00920,ko01100,ko01120,map00920,map01100,map01120	ko00000,ko00001,ko01000,ko03400	DHHA1 domain protein
BNEFENCH_02314	1.52e-144	-	-	-	Q	-	-	-	Methyltransferase
BNEFENCH_02315	6.06e-61	sugE	-	-	U	ko:K11741	-	ko00000,ko02000	Multidrug resistance protein
BNEFENCH_02316	1.5e-171	-	-	-	S	-	-	-	-acetyltransferase
BNEFENCH_02317	3.92e-120	yfbM	-	-	K	-	-	-	FR47-like protein
BNEFENCH_02318	2.42e-122	-	-	-	E	-	-	-	HAD-hyrolase-like
BNEFENCH_02319	1.3e-239	-	1.1.1.1	-	C	ko:K00001	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	nadph quinone reductase
BNEFENCH_02320	1.56e-177	ptp1	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Tyrosine phosphatase family
BNEFENCH_02321	1.11e-118	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
BNEFENCH_02322	7.83e-108	yiaC	-	-	K	ko:K03826	-	ko00000,ko01000	Acetyltransferase (GNAT) domain
BNEFENCH_02323	1.34e-98	-	-	-	K	ko:K03830	-	ko00000,ko01000	Acetyltransferase (GNAT) domain
BNEFENCH_02324	1.01e-105	rlmH	2.1.1.177	-	J	ko:K00783	-	ko00000,ko01000,ko03009	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
BNEFENCH_02325	2.57e-252	ysdE	-	-	P	-	-	-	Citrate transporter
BNEFENCH_02326	1.23e-90	-	-	-	-	-	-	-	-
BNEFENCH_02327	0.0	dapE	3.5.1.18	-	E	ko:K01439	ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Peptidase dimerisation domain
BNEFENCH_02328	0.0	oppA	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
BNEFENCH_02329	1.43e-133	-	-	-	-	-	-	-	-
BNEFENCH_02330	0.0	cadA	-	-	P	-	-	-	P-type ATPase
BNEFENCH_02331	1.8e-99	hsp3	-	-	O	ko:K13993	ko04141,map04141	ko00000,ko00001,ko03110	Belongs to the small heat shock protein (HSP20) family
BNEFENCH_02332	2.35e-92	-	-	-	S	-	-	-	Iron-sulphur cluster biosynthesis
BNEFENCH_02333	1.14e-282	htrA	3.4.21.107	-	O	ko:K04771	ko01503,ko02020,map01503,map02020	ko00000,ko00001,ko00002,ko01000,ko01002,ko03110	serine protease
BNEFENCH_02334	1.24e-195	vicX	3.1.26.11	-	S	ko:K00784	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	domain protein
BNEFENCH_02335	1.05e-182	yycI	-	-	S	-	-	-	YycH protein
BNEFENCH_02336	0.0	yycH	-	-	S	-	-	-	YycH protein
BNEFENCH_02337	0.0	vicK	2.7.13.3	-	T	ko:K07652	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
BNEFENCH_02338	3.03e-168	yycF	-	-	K	ko:K07668	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	response regulator
BNEFENCH_02339	5.03e-156	-	1.11.1.10	-	S	ko:K00433	-	ko00000,ko01000	Alpha/beta hydrolase family
BNEFENCH_02340	0.0	arpJ	-	-	P	ko:K02029,ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter permease
BNEFENCH_02341	1.63e-298	argG	6.3.4.5	-	E	ko:K01940	ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,ko05418,map00220,map00250,map01100,map01110,map01130,map01230,map05418	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the argininosuccinate synthase family. Type 1 subfamily
BNEFENCH_02342	0.0	argH	4.3.2.1	-	E	ko:K01755	ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,map00220,map00250,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	argininosuccinate lyase
BNEFENCH_02343	5.58e-272	ybhE	-	-	S	ko:K09963	-	ko00000	Bacterial protein of unknown function (DUF871)
BNEFENCH_02344	9.09e-97	-	-	-	S	-	-	-	Domain of unknown function (DUF3284)
BNEFENCH_02345	3.86e-133	chbC	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
BNEFENCH_02346	1.13e-155	chbC	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
BNEFENCH_02347	1.97e-168	gntR	-	-	K	ko:K03489	-	ko00000,ko03000	UTRA
BNEFENCH_02348	5.86e-68	pts20B	2.7.1.196, 2.7.1.205	-	G	ko:K02760	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
BNEFENCH_02349	6.88e-71	celC	2.7.1.196, 2.7.1.205	-	G	ko:K02759	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose Cellobiose specific IIA subunit
BNEFENCH_02350	6.11e-139	yokL3	-	-	J	-	-	-	Acetyltransferase (GNAT) domain
BNEFENCH_02351	1.84e-110	-	-	-	F	-	-	-	NUDIX domain
BNEFENCH_02352	1.76e-115	-	-	-	S	-	-	-	AAA domain
BNEFENCH_02353	3.88e-147	ycaC	-	-	Q	-	-	-	Isochorismatase family
BNEFENCH_02354	0.0	-	-	-	EGP	-	-	-	Major Facilitator Superfamily
BNEFENCH_02355	5.62e-274	yycB	-	-	P	ko:K03449	-	ko00000,ko02000	Transporter, major facilitator family protein
BNEFENCH_02356	4.25e-220	iolS	-	-	C	ko:K06607	-	ko00000,ko01000	Aldo keto reductase
BNEFENCH_02357	1.08e-84	manO	-	-	S	-	-	-	Domain of unknown function (DUF956)
BNEFENCH_02358	1.73e-216	manN	-	-	G	ko:K02796,ko:K02815	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	system, mannose fructose sorbose family IID component
BNEFENCH_02359	1.57e-171	manM	-	-	G	ko:K02746,ko:K02795,ko:K02814	ko00051,ko00052,ko00520,ko01100,ko02060,map00051,map00052,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	PTS system
BNEFENCH_02360	8.35e-230	manL	2.7.1.191, 2.7.1.202	-	G	ko:K02769,ko:K02793,ko:K02794	ko00051,ko00520,ko01100,ko01120,ko02060,map00051,map00520,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system sorbose subfamily IIB component
BNEFENCH_02361	9.77e-279	-	-	-	EGP	-	-	-	Major facilitator Superfamily
BNEFENCH_02362	7.28e-243	-	-	-	K	ko:K20373	ko02024,map02024	ko00000,ko00001,ko03000	Helix-turn-helix XRE-family like proteins
BNEFENCH_02363	8.33e-193	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
BNEFENCH_02364	3.06e-204	ywdE	-	-	K	ko:K20375	ko02024,map02024	ko00000,ko00001,ko03000	Helix-turn-helix XRE-family like proteins
BNEFENCH_02366	0.0	XK27_05795	-	-	P	ko:K17073,ko:K17074	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
BNEFENCH_02367	3.81e-172	glnQ	-	-	E	ko:K17076	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
BNEFENCH_02368	4.51e-41	-	-	-	-	-	-	-	-
BNEFENCH_02369	9.94e-304	-	-	-	G	ko:K02027	-	ko00000,ko00002,ko02000	Bacterial extracellular solute-binding protein
BNEFENCH_02370	1.33e-166	-	-	-	S	-	-	-	Protein of unknown function (DUF975)
BNEFENCH_02371	5.96e-53	-	-	-	S	-	-	-	Iron-sulphur cluster biosynthesis
BNEFENCH_02372	1.4e-69	-	-	-	-	-	-	-	-
BNEFENCH_02373	8.68e-106	ydbS	-	-	S	ko:K09167	-	ko00000	Bacterial PH domain
BNEFENCH_02374	0.0	ydbT	-	-	S	ko:K08981	-	ko00000	Bacterial PH domain
BNEFENCH_02375	7.76e-186	-	-	-	S	-	-	-	AAA ATPase domain
BNEFENCH_02376	1.08e-212	-	-	-	G	-	-	-	Phosphotransferase enzyme family
BNEFENCH_02377	1.09e-170	glnQ	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
BNEFENCH_02378	0.0	glnP	-	-	P	ko:K02029,ko:K02030,ko:K10036	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
BNEFENCH_02379	0.0	glnP	-	-	P	ko:K02029,ko:K02030,ko:K10036	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
BNEFENCH_02380	9.37e-129	ydaF	-	-	J	ko:K03817	-	ko00000,ko01000,ko03009	Acetyltransferase (GNAT) domain
BNEFENCH_02381	2.22e-137	-	-	-	S	ko:K06384	-	ko00000	Stage II sporulation protein M
BNEFENCH_02382	1.23e-180	-	-	-	S	ko:K03924	-	ko00000,ko01000	ATPase family associated with various cellular activities (AAA)
BNEFENCH_02383	8.74e-235	-	-	-	S	-	-	-	Protein of unknown function DUF58
BNEFENCH_02384	0.0	yebA	-	-	E	-	-	-	Transglutaminase/protease-like homologues
BNEFENCH_02385	2.11e-273	-	-	-	M	-	-	-	Glycosyl transferases group 1
BNEFENCH_02386	1.34e-126	thgA3	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	Maltose acetyltransferase
BNEFENCH_02387	1.75e-185	-	3.1.3.102, 3.1.3.104, 3.1.3.23	-	G	ko:K07757,ko:K20861	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Sucrose-6F-phosphate phosphohydrolase
BNEFENCH_02388	0.0	aspA	4.3.1.1	-	E	ko:K01744	ko00250,ko01100,map00250,map01100	ko00000,ko00001,ko01000	Fumarase C C-terminus
BNEFENCH_02389	4.78e-146	-	-	-	S	-	-	-	Bacteriocin-protection, YdeI or OmpD-Associated
BNEFENCH_02390	1.49e-61	yjdF3	-	-	S	-	-	-	Protein of unknown function (DUF2992)
BNEFENCH_02391	3.65e-272	mae	1.1.1.38	-	C	ko:K00027	ko00620,ko01200,ko02020,map00620,map01200,map02020	ko00000,ko00001,ko01000	Malic enzyme, NAD binding domain
BNEFENCH_02392	7.32e-290	malP	-	-	C	ko:K11616	ko02020,map02020	ko00000,ko00001	2-hydroxycarboxylate transporter family
BNEFENCH_02393	0.0	dpiB	2.7.13.3	-	T	ko:K02476,ko:K11614	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Single cache domain 3
BNEFENCH_02394	6.07e-155	malR	-	-	KT	ko:K02475,ko:K11615	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	cheY-homologous receiver domain
BNEFENCH_02395	1.56e-194	-	-	-	I	-	-	-	NAD binding domain of 6-phosphogluconate dehydrogenase
BNEFENCH_02396	1.3e-115	M1-431	-	-	S	-	-	-	Protein of unknown function (DUF1706)
BNEFENCH_02397	6.42e-86	-	-	-	-	-	-	-	-
BNEFENCH_02398	1.58e-284	yagE	-	-	E	-	-	-	Amino acid permease
BNEFENCH_02399	2.36e-217	-	-	-	O	-	-	-	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BNEFENCH_02400	4.59e-29	-	-	-	V	-	-	-	Domain of unknown function (DUF3883)
BNEFENCH_02401	0.0	-	-	-	L	-	-	-	Transposase DDE domain
BNEFENCH_02403	6.9e-262	-	-	-	S	-	-	-	Calcineurin-like phosphoesterase
BNEFENCH_02404	6.42e-208	menA	2.5.1.74	-	H	ko:K02548	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01006	1,4-dihydroxy-2-naphthoate
BNEFENCH_02405	3.26e-226	hepT	2.5.1.30	-	H	ko:K00805	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	Belongs to the FPP GGPP synthase family
BNEFENCH_02406	1.92e-283	ackA	2.7.2.1	-	F	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
BNEFENCH_02407	9.96e-212	ysdB	-	-	S	ko:K01990	-	ko00000,ko00002,ko02000	abc transporter atp-binding protein
BNEFENCH_02408	2.61e-280	ysdA	-	-	CP	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 family transporter protein
BNEFENCH_02409	6.81e-86	ytrA	-	-	K	ko:K07979	-	ko00000,ko03000	helix_turn_helix gluconate operon transcriptional repressor
BNEFENCH_02410	9.19e-209	CcmA	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter
BNEFENCH_02411	2.13e-143	-	-	-	I	-	-	-	ABC-2 family transporter protein
BNEFENCH_02412	2.06e-187	gdh	1.1.1.47	-	IQ	ko:K00034	ko00030,ko01120,ko01200,map00030,map01120,map01200	ko00000,ko00001,ko01000	reductase
BNEFENCH_02413	7.48e-260	ald1	1.4.1.1	-	C	ko:K00259	ko00250,ko00430,ko01100,map00250,map00430,map01100	ko00000,ko00001,ko01000	Belongs to the AlaDH PNT family
BNEFENCH_02414	3.18e-240	ilvA	4.3.1.19	-	E	ko:K01754	ko00260,ko00290,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00290,map01100,map01110,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
BNEFENCH_02415	0.0	-	-	-	S	-	-	-	OPT oligopeptide transporter protein
BNEFENCH_02416	8.34e-83	-	-	-	S	-	-	-	Coenzyme PQQ synthesis protein D (PqqD)
BNEFENCH_02417	0.0	pepD3	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
BNEFENCH_02418	0.0	gshR3	1.8.1.7	-	C	ko:K00383	ko00480,ko04918,map00480,map04918	ko00000,ko00001,ko01000	Glutathione reductase
BNEFENCH_02419	0.0	lmrB	-	-	U	ko:K18926	-	ko00000,ko00002,ko02000	Belongs to the major facilitator superfamily
BNEFENCH_02420	4.96e-127	-	-	-	K	ko:K18939	-	ko00000,ko00002,ko03000	Bacterial regulatory proteins, tetR family
BNEFENCH_02421	0.0	bglH	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
BNEFENCH_02422	0.0	bglP	-	-	G	ko:K02755,ko:K02756,ko:K02757	ko02060,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
BNEFENCH_02423	2.51e-200	bglG4	-	-	K	ko:K03488	-	ko00000,ko03000	CAT RNA binding domain
BNEFENCH_02424	0.0	msbA9	-	-	V	ko:K06148	-	ko00000,ko02000	ABC transporter transmembrane region
BNEFENCH_02425	0.0	cydD1	-	-	CO	ko:K06147,ko:K06148	-	ko00000,ko02000	ABC transporter transmembrane region
BNEFENCH_02426	3.15e-98	-	-	-	S	-	-	-	NusG domain II
BNEFENCH_02427	2.71e-206	-	-	-	M	-	-	-	Peptidoglycan-binding domain 1 protein
BNEFENCH_02428	1.1e-155	-	-	-	S	-	-	-	CRISPR-associated protein (Cas_Csn2)
BNEFENCH_02429	2.84e-62	cas2	-	-	L	ko:K09951	-	ko00000,ko02048	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
BNEFENCH_02430	1.73e-215	cas1	-	-	L	ko:K15342	-	ko00000,ko02048,ko03400	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
BNEFENCH_02431	0.0	cas9	-	-	L	ko:K09952	-	ko00000,ko01000,ko02048	CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
BNEFENCH_02432	1.68e-183	-	-	-	-	-	-	-	-
BNEFENCH_02433	1.88e-275	-	-	-	S	-	-	-	Membrane
BNEFENCH_02434	6.76e-84	-	-	-	S	-	-	-	Protein of unknown function (DUF1093)
BNEFENCH_02435	6.43e-66	-	-	-	-	-	-	-	-
BNEFENCH_02436	0.0	cydD	-	-	CO	ko:K16012	ko02010,map02010	ko00000,ko00001,ko02000	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
BNEFENCH_02437	0.0	cydC	-	-	CO	ko:K16013	ko02010,map02010	ko00000,ko00001,ko02000	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
BNEFENCH_02438	2.5e-233	cydB	1.10.3.14	-	C	ko:K00426	ko00190,ko01100,ko02020,map00190,map01100,map02020	ko00000,ko00001,ko00002,ko01000	Cytochrome d ubiquinol oxidase subunit II
BNEFENCH_02439	0.0	cydA	1.10.3.14	-	C	ko:K00425	ko00190,ko01100,ko02020,map00190,map01100,map02020	ko00000,ko00001,ko00002,ko01000	ubiquinol oxidase
BNEFENCH_02441	1.73e-305	pdp	2.4.2.2	-	F	ko:K00756	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	pyrimidine-nucleoside phosphorylase
BNEFENCH_02442	1.86e-245	add	3.5.4.2, 3.5.4.4	-	F	ko:K01488,ko:K02029,ko:K21053	ko00230,ko01100,ko05340,map00230,map01100,map05340	ko00000,ko00001,ko00002,ko01000,ko02000	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
BNEFENCH_02443	6.98e-53	-	-	-	-	-	-	-	-
BNEFENCH_02444	1.22e-112	-	-	-	-	-	-	-	-
BNEFENCH_02445	6.71e-34	-	-	-	-	-	-	-	-
BNEFENCH_02446	1.72e-213	-	-	-	EG	-	-	-	EamA-like transporter family
BNEFENCH_02447	2.96e-145	tag	3.2.2.20	-	L	ko:K01246	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	glycosylase
BNEFENCH_02448	9.59e-101	usp5	-	-	T	-	-	-	universal stress protein
BNEFENCH_02449	3.25e-74	-	-	-	K	-	-	-	Helix-turn-helix domain
BNEFENCH_02450	1.83e-186	ptp3	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Tyrosine phosphatase family
BNEFENCH_02451	6.69e-287	queG	1.17.99.6	-	C	ko:K18979	-	ko00000,ko01000,ko03016	Domain of unknown function (DUF1730)
BNEFENCH_02452	1.54e-84	-	-	-	-	-	-	-	-
BNEFENCH_02453	7.09e-113	bioY	-	-	S	ko:K03523	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	BioY family
BNEFENCH_02454	5.77e-93	adhR	-	-	K	-	-	-	helix_turn_helix, mercury resistance
BNEFENCH_02455	4.3e-106	-	-	-	C	-	-	-	Flavodoxin
BNEFENCH_02456	1.09e-252	adh2	1.1.1.1	-	E	ko:K00001	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	alcohol dehydrogenase
BNEFENCH_02457	6.48e-147	-	-	-	GM	-	-	-	NmrA-like family
BNEFENCH_02459	2.29e-131	-	-	-	Q	-	-	-	methyltransferase
BNEFENCH_02460	5.19e-135	-	-	-	T	-	-	-	Sh3 type 3 domain protein
BNEFENCH_02461	2.34e-152	-	-	-	F	-	-	-	glutamine amidotransferase
BNEFENCH_02462	1.05e-173	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2263)
BNEFENCH_02463	0.0	yhdP	-	-	S	-	-	-	Transporter associated domain
BNEFENCH_02464	0.0	ycnB	-	-	U	-	-	-	Belongs to the major facilitator superfamily
BNEFENCH_02465	8.38e-80	-	-	-	S	-	-	-	Domain of unknown function (DUF4811)
BNEFENCH_02466	4.8e-128	maf	-	-	D	ko:K06287	-	ko00000	nucleoside-triphosphate diphosphatase activity
BNEFENCH_02467	0.0	mutL	-	-	L	ko:K03572	ko03430,map03430	ko00000,ko00001,ko03400	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
BNEFENCH_02468	0.0	mutS	-	-	L	ko:K03555	ko03430,map03430	ko00000,ko00001,ko03400	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
BNEFENCH_02469	0.0	ydaO	-	-	E	-	-	-	amino acid
BNEFENCH_02470	5.32e-75	-	-	-	S	-	-	-	Domain of unknown function (DUF1827)
BNEFENCH_02471	0.0	groL	-	-	O	ko:K04077	ko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
BNEFENCH_02472	1.7e-59	groS	-	-	O	ko:K04078	-	ko00000,ko03029,ko03110	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
BNEFENCH_02473	1.01e-141	ydiL	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
BNEFENCH_02474	1.01e-251	brpA	-	-	K	-	-	-	Cell envelope-like function transcriptional attenuator common domain protein
BNEFENCH_02475	1.21e-222	-	-	-	-	-	-	-	-
BNEFENCH_02476	1.63e-201	-	-	-	V	ko:K01990,ko:K16921	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
BNEFENCH_02477	4.97e-81	ytrA	-	-	K	ko:K07979	-	ko00000,ko03000	helix_turn_helix gluconate operon transcriptional repressor
BNEFENCH_02478	1.1e-151	rex	-	-	K	ko:K01926	-	ko00000,ko03000	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
BNEFENCH_02479	0.0	ydiF	-	-	S	ko:K06158	-	ko00000,ko03012	ABC transporter, ATP-binding protein
BNEFENCH_02480	1.55e-68	ptcB	2.7.1.196, 2.7.1.205	-	G	ko:K02760	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
BNEFENCH_02481	5.99e-243	tsaD	2.3.1.234	-	J	ko:K01409	-	ko00000,ko01000,ko03016	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
BNEFENCH_02482	8.44e-130	rimI	2.3.1.128	-	K	ko:K03789	-	ko00000,ko01000,ko03009	Ribosomal-protein-alanine acetyltransferase
BNEFENCH_02483	3.82e-168	yeaZ	2.3.1.234	-	O	ko:K01409,ko:K14742	-	ko00000,ko01000,ko03016	Universal bacterial protein YeaZ
BNEFENCH_02484	3.43e-95	-	-	-	-	-	-	-	-
BNEFENCH_02485	1.4e-116	-	-	-	T	-	-	-	ECF transporter, substrate-specific component
BNEFENCH_02486	7.46e-233	ansB	3.5.1.1	-	EJ	ko:K01424	ko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110	ko00000,ko00001,ko01000	Asparaginase
BNEFENCH_02487	3.86e-185	fat	3.1.2.21	-	I	ko:K01071	ko00061,ko01100,map00061,map01100	ko00000,ko00001,ko01000,ko01004	Acyl-ACP thioesterase
BNEFENCH_02488	1.23e-191	rsmI	2.1.1.198	-	H	ko:K07056	-	ko00000,ko01000,ko03009	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
BNEFENCH_02489	7.92e-76	yabA	-	-	L	-	-	-	Involved in initiation control of chromosome replication
BNEFENCH_02490	4.59e-223	holB	2.7.7.7	-	L	ko:K02341	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III
BNEFENCH_02491	1.14e-69	yaaQ	-	-	S	-	-	-	Cyclic-di-AMP receptor
BNEFENCH_02492	5.06e-149	tmk	2.7.4.9	-	F	ko:K00943	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
BNEFENCH_02493	2.95e-46	-	-	-	S	-	-	-	Protein of unknown function (DUF2508)
BNEFENCH_02494	1.26e-139	recR	-	-	L	ko:K06187	ko03440,map03440	ko00000,ko00001,ko03400	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
BNEFENCH_02495	7e-49	yaaK	-	-	S	ko:K09747	-	ko00000	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
BNEFENCH_02496	0.0	dnaX	2.7.7.7	-	L	ko:K02343	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
BNEFENCH_02497	4.38e-118	tadA	3.5.4.33	-	F	ko:K11991	-	ko00000,ko01000,ko03016	Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
BNEFENCH_02498	9.05e-67	-	-	-	-	-	-	-	-
BNEFENCH_02499	2.44e-141	rsmC	2.1.1.172	-	J	ko:K00564	-	ko00000,ko01000,ko03009	Methyltransferase
BNEFENCH_02500	0.0	mprF	2.3.2.3	-	S	ko:K14205	ko01503,ko02020,ko05150,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01000,ko01504	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
BNEFENCH_02501	3.3e-59	-	-	-	-	-	-	-	-
BNEFENCH_02502	1.49e-225	ccpB	-	-	K	-	-	-	lacI family
BNEFENCH_02503	0.0	prtB	3.4.21.96	-	O	ko:K01361	-	ko00000,ko01000,ko01002,ko03110	Belongs to the peptidase S8 family
BNEFENCH_02504	2.41e-205	-	5.2.1.8	-	M	ko:K07533	-	ko00000,ko01000,ko03110	Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
BNEFENCH_02505	1.37e-74	rplL	-	-	J	ko:K02935	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
BNEFENCH_02506	7.23e-108	rplJ	-	-	J	ko:K02864	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
BNEFENCH_02507	1.92e-283	mdtG	-	-	EGP	ko:K08161	-	ko00000,ko02000	Transporter, major facilitator family protein
BNEFENCH_02508	1.93e-196	-	-	-	K	-	-	-	acetyltransferase
BNEFENCH_02509	1.4e-86	-	-	-	-	-	-	-	-
BNEFENCH_02510	1.19e-277	yceI	-	-	G	ko:K08369	-	ko00000,ko02000	Sugar (and other) transporter
BNEFENCH_02511	0.0	gabD	1.2.1.16, 1.2.1.20, 1.2.1.79	-	C	ko:K00135	ko00250,ko00310,ko00350,ko00650,ko00760,ko01100,ko01120,map00250,map00310,map00350,map00650,map00760,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Belongs to the aldehyde dehydrogenase family
BNEFENCH_02512	1.89e-158	rplA	-	-	J	ko:K02863	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
BNEFENCH_02513	6.87e-93	rplK	-	-	J	ko:K02867	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
BNEFENCH_02514	0.0	mgtA	3.6.3.2	-	P	ko:K01531	-	ko00000,ko01000	COG0474 Cation transport ATPase
BNEFENCH_02515	0.0	nylA	3.5.1.4	-	J	ko:K01426	ko00330,ko00360,ko00380,ko00627,ko00643,ko01120,map00330,map00360,map00380,map00627,map00643,map01120	ko00000,ko00001,ko01000	Belongs to the amidase family
BNEFENCH_02516	3.48e-86	frataxin	-	-	S	ko:K05937	-	ko00000	Domain of unknown function (DU1801)
BNEFENCH_02517	2.94e-118	yvqK	2.5.1.17	-	S	ko:K00798	ko00860,ko01100,map00860,map01100	ko00000,ko00001,ko00002,ko01000	Cobalamin adenosyltransferase
BNEFENCH_02518	1.31e-123	-	-	-	S	ko:K16927	-	ko00000,ko00002,ko02000	ECF transporter, substrate-specific component
BNEFENCH_02519	1.76e-82	-	-	-	S	-	-	-	Domain of unknown function (DUF4430)
BNEFENCH_02520	0.0	rtpR	1.17.4.2	-	F	ko:K00527	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000	ribonucleoside-triphosphate reductase activity
BNEFENCH_02521	3.77e-102	-	-	-	F	-	-	-	Nucleoside 2-deoxyribosyltransferase
BNEFENCH_02522	1.71e-205	-	-	-	S	-	-	-	Alpha/beta hydrolase of unknown function (DUF915)
BNEFENCH_02523	2.29e-130	nusG	-	-	K	ko:K02601	-	ko00000,ko03009,ko03021	Participates in transcription elongation, termination and antitermination
BNEFENCH_02524	2.09e-30	secE	-	-	U	ko:K03073	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
BNEFENCH_02525	4.4e-29	rpmG	-	-	J	ko:K02913	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL33 family
BNEFENCH_02526	4.58e-220	menA	2.5.1.74	-	H	ko:K02548	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01006	1,4-dihydroxy-2-naphthoate
BNEFENCH_02527	7.83e-213	menA	2.5.1.74	-	M	ko:K02548	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01006	UbiA prenyltransferase family
BNEFENCH_02528	4.22e-247	apbE	2.7.1.180	-	H	ko:K03734	-	ko00000,ko01000	Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
BNEFENCH_02529	6.86e-187	cad	-	-	S	ko:K20379	ko02024,map02024	ko00000,ko00001	FMN_bind
BNEFENCH_02530	0.0	ndh	1.6.99.3	-	C	ko:K03885	ko00190,map00190	ko00000,ko00001,ko01000	NADH dehydrogenase
BNEFENCH_02531	1.6e-103	-	-	-	S	-	-	-	NusG domain II
BNEFENCH_02532	1.03e-127	hepA	2.5.1.30	-	S	ko:K00805	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	Heptaprenyl diphosphate synthase component I
BNEFENCH_02533	1.05e-228	hepT	2.5.1.30, 2.5.1.83	-	H	ko:K00805,ko:K21275	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	Belongs to the FPP GGPP synthase family
BNEFENCH_02534	6.6e-158	-	1.5.1.40	-	S	ko:K06988	-	ko00000,ko01000	Rossmann-like domain
BNEFENCH_02535	1.48e-248	XK27_00915	-	-	C	-	-	-	Luciferase-like monooxygenase
BNEFENCH_02537	5.04e-127	yacP	-	-	S	ko:K06962	-	ko00000	YacP-like NYN domain
BNEFENCH_02538	3.82e-182	trmH	2.1.1.185	-	J	ko:K03218	-	ko00000,ko01000,ko03009	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
BNEFENCH_02539	4.83e-98	mrnC	-	-	J	ko:K11145	-	ko00000,ko01000,ko03009	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
BNEFENCH_02540	0.0	cysS	6.1.1.16	-	J	ko:K01883	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-I aminoacyl-tRNA synthetase family
BNEFENCH_02541	0.0	loxD	1.1.3.15	-	C	ko:K00104	ko00630,ko01100,ko01110,ko01120,ko01130,map00630,map01100,map01110,map01120,map01130	ko00000,ko00001,ko01000	FAD linked oxidases, C-terminal domain
BNEFENCH_02542	2.65e-139	-	-	-	-	-	-	-	-
BNEFENCH_02544	0.0	gltX	6.1.1.24	-	J	ko:K09698	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
BNEFENCH_02545	4.9e-239	XK27_10475	-	-	S	-	-	-	Oxidoreductase family, NAD-binding Rossmann fold
BNEFENCH_02546	8.66e-152	rpiA1	5.3.1.6	-	G	ko:K01807	ko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
BNEFENCH_02547	1.73e-182	-	-	-	K	-	-	-	SIS domain
BNEFENCH_02548	2.64e-145	yhfC	-	-	S	-	-	-	Putative membrane peptidase family (DUF2324)
BNEFENCH_02549	5.58e-226	-	-	-	S	-	-	-	Membrane
BNEFENCH_02550	5.31e-82	-	-	-	K	-	-	-	helix_turn_helix gluconate operon transcriptional repressor
BNEFENCH_02551	2.86e-287	inlJ	-	-	M	-	-	-	MucBP domain
BNEFENCH_02552	5.49e-261	yacL	-	-	S	-	-	-	domain protein
BNEFENCH_02553	0.0	radA	-	-	O	ko:K04485	-	ko00000,ko03400	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
BNEFENCH_02554	4.85e-130	dut	3.6.1.23	-	F	ko:K01520	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	dUTPase
BNEFENCH_02555	1.22e-67	yjdJ	-	-	S	ko:K06975	-	ko00000	GCN5-related N-acetyl-transferase
BNEFENCH_02556	5.93e-93	-	-	-	S	-	-	-	Protein of unknown function (DUF805)
BNEFENCH_02557	0.0	pepE	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	aminopeptidase
BNEFENCH_02558	0.0	pepC	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	Peptidase C1-like family
BNEFENCH_02559	1.09e-253	-	-	-	-	ko:K01992	-	ko00000,ko00002,ko02000	-
BNEFENCH_02560	7.42e-277	-	-	-	S	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 family transporter protein
BNEFENCH_02561	5.79e-214	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
BNEFENCH_02562	0.0	kup	-	-	P	ko:K03549	-	ko00000,ko02000	Transport of potassium into the cell
BNEFENCH_02563	0.0	ppdK	2.7.9.1	-	G	ko:K01006	ko00620,ko00710,ko00720,ko01100,ko01120,ko01200,map00620,map00710,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Belongs to the PEP-utilizing enzyme family
BNEFENCH_02565	1.62e-12	-	-	-	-	-	-	-	-
BNEFENCH_02569	1.33e-182	-	-	-	S	-	-	-	CAAX protease self-immunity
BNEFENCH_02571	1.55e-72	-	-	-	-	-	-	-	-
BNEFENCH_02573	1.96e-71	-	-	-	S	-	-	-	Enterocin A Immunity
BNEFENCH_02574	3.07e-135	-	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	Maltose acetyltransferase
BNEFENCH_02578	1.45e-231	ydhF	-	-	S	-	-	-	Aldo keto reductase
BNEFENCH_02579	3.51e-166	-	-	-	S	-	-	-	Belongs to the short-chain dehydrogenases reductases (SDR) family
BNEFENCH_02580	2.12e-273	yqiG	-	-	C	-	-	-	Oxidoreductase
BNEFENCH_02582	0.0	fumC	4.2.1.2	-	C	ko:K01679	ko00020,ko00620,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko04934,ko05200,ko05211,map00020,map00620,map00720,map01100,map01110,map01120,map01130,map01200,map04934,map05200,map05211	ko00000,ko00001,ko00002,ko01000	Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
BNEFENCH_02583	2.2e-173	-	-	-	-	-	-	-	-
BNEFENCH_02584	6.42e-28	-	-	-	-	-	-	-	-
BNEFENCH_02585	0.0	mntH	-	-	P	ko:K03322	-	ko00000,ko02000	H( )-stimulated, divalent metal cation uptake system
BNEFENCH_02586	0.0	atp2C1	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	P-type ATPase
BNEFENCH_02587	9.77e-74	-	-	-	-	-	-	-	-
BNEFENCH_02588	1.04e-304	-	-	-	EGP	-	-	-	Major Facilitator Superfamily
BNEFENCH_02589	0.0	sufI	-	-	Q	-	-	-	Multicopper oxidase
BNEFENCH_02590	1.53e-35	-	-	-	-	-	-	-	-
BNEFENCH_02591	2.22e-144	-	-	-	P	-	-	-	Cation efflux family
BNEFENCH_02592	1.23e-69	czrA	-	-	K	ko:K22043	-	ko00000,ko03000	Transcriptional regulator, ArsR family
BNEFENCH_02593	6.58e-226	mntA	-	-	P	ko:K19975,ko:K19976	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the bacterial solute-binding protein 9 family
BNEFENCH_02594	5.89e-185	mtsB	-	-	U	ko:K19972,ko:K19976	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC 3 transport family
BNEFENCH_02595	3.38e-170	-	3.6.3.35	-	P	ko:K19973	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	AAA domain, putative AbiEii toxin, Type IV TA system
BNEFENCH_02596	0.0	aldA	1.2.1.21, 1.2.1.22	-	C	ko:K07248	ko00620,ko00630,ko01120,map00620,map00630,map01120	ko00000,ko00001,ko01000	Belongs to the aldehyde dehydrogenase family
BNEFENCH_02597	6.85e-55	rpsN	-	-	J	ko:K02954	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
BNEFENCH_02598	6.75e-215	psaA	-	-	P	ko:K02077,ko:K11707	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the bacterial solute-binding protein 9 family
BNEFENCH_02599	2.83e-152	-	-	-	GM	-	-	-	NmrA-like family
BNEFENCH_02600	4.01e-146	yjhB	3.6.1.13	-	F	ko:K01515	ko00230,map00230	ko00000,ko00001,ko01000	NUDIX domain
BNEFENCH_02601	2.87e-101	-	-	-	-	-	-	-	-
BNEFENCH_02602	0.0	-	-	-	M	-	-	-	domain protein
BNEFENCH_02603	5.12e-212	psaA	-	-	P	ko:K02077,ko:K11707	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the bacterial solute-binding protein 9 family
BNEFENCH_02604	2.1e-27	-	-	-	-	-	-	-	-
BNEFENCH_02607	1.46e-152	-	-	-	-	-	-	-	-
BNEFENCH_02611	1.02e-67	crcB	-	-	U	ko:K06199	-	ko00000,ko02000	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
BNEFENCH_02612	1.25e-88	crcB1	-	-	U	ko:K06199	-	ko00000,ko02000	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
BNEFENCH_02613	2.94e-192	-	-	-	L	-	-	-	Uncharacterised protein family (UPF0236)
BNEFENCH_02614	3.34e-47	eno	4.2.1.11	-	G	ko:K01689	ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066	ko00000,ko00001,ko00002,ko01000,ko03019,ko04147	phosphopyruvate hydratase activity
BNEFENCH_02615	1.99e-212	phnD	-	-	P	ko:K02044	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Phosphonate ABC transporter
BNEFENCH_02616	1.49e-178	phnC	3.6.3.28	-	P	ko:K02041	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
BNEFENCH_02617	2.46e-174	phnB	-	-	P	ko:K02042	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
BNEFENCH_02618	1.97e-188	ptxC	-	-	P	ko:K02042	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
BNEFENCH_02619	7.35e-224	ssuA	-	-	P	ko:K02051,ko:K15553	ko00920,ko02010,map00920,map02010	ko00000,ko00001,ko00002,ko02000	NMT1-like family
BNEFENCH_02620	0.0	-	6.2.1.48	-	IQ	ko:K02182	-	ko00000,ko01000	AMP-binding enzyme C-terminal domain
BNEFENCH_02621	1.06e-296	-	-	-	I	-	-	-	Acyltransferase family
BNEFENCH_02622	1.17e-154	ssuB	-	-	P	ko:K15555	ko00920,ko02010,map00920,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATPases associated with a variety of cellular activities
BNEFENCH_02623	6.89e-191	ssuC	-	-	U	ko:K15554	ko00920,ko02010,map00920,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
BNEFENCH_02624	1.13e-174	XK27_06950	-	-	S	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 family transporter protein
BNEFENCH_02625	8.58e-173	XK27_06945	-	-	S	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 family transporter protein
BNEFENCH_02626	3.51e-169	-	-	-	S	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter
BNEFENCH_02627	1.15e-60	-	-	-	S	-	-	-	Protein of unknown function (DUF2785)
BNEFENCH_02628	5.29e-126	-	-	-	-	-	-	-	-
BNEFENCH_02629	1.02e-71	-	-	-	-	-	-	-	-
BNEFENCH_02630	5.47e-158	repE	-	-	K	-	-	-	Primase C terminal 1 (PriCT-1)
BNEFENCH_02631	3.61e-09	-	-	-	D	-	-	-	PFAM Cobyrinic acid a,c-diamide synthase
BNEFENCH_02632	6.16e-85	is18	-	-	L	-	-	-	Integrase core domain
BNEFENCH_02633	3.43e-09	-	-	-	L	ko:K07483	-	ko00000	transposase activity
BNEFENCH_02634	5.03e-15	-	-	-	M	-	-	-	Cna B domain protein
BNEFENCH_02635	4.65e-23	-	-	-	M	-	-	-	Gram-positive pilin subunit D1, N-terminal
BNEFENCH_02636	1.16e-10	-	-	-	M	-	-	-	Gram-positive pilin subunit D1, N-terminal
BNEFENCH_02637	1.37e-139	-	3.4.22.70	-	M	ko:K07284	-	ko00000,ko01000,ko01002,ko01011	Sortase family
BNEFENCH_02639	1.67e-160	-	-	-	L	-	-	-	Transposase DDE domain group 1
BNEFENCH_02641	3.24e-122	-	-	-	L	-	-	-	COG1484 DNA replication protein
BNEFENCH_02642	5.48e-199	-	-	-	L	-	-	-	Transposase and inactivated derivatives
BNEFENCH_02643	1.19e-98	-	-	-	L	-	-	-	Initiator Replication protein
BNEFENCH_02645	7.82e-06	-	-	-	-	-	-	-	-
BNEFENCH_02647	1.12e-268	ybfG	-	-	M	-	-	-	peptidoglycan-binding domain-containing protein
BNEFENCH_02652	3.24e-122	-	-	-	L	-	-	-	COG1484 DNA replication protein
BNEFENCH_02653	5.48e-199	-	-	-	L	-	-	-	Transposase and inactivated derivatives
BNEFENCH_02654	1.05e-56	-	2.4.1.52	GT4	M	ko:K00712	-	ko00000,ko01000,ko01003	Glycosyl transferases group 1
BNEFENCH_02656	1.86e-113	-	-	-	L	-	-	-	Transposase DDE domain
BNEFENCH_02657	5.72e-103	-	-	-	L	-	-	-	Transposase DDE domain
BNEFENCH_02659	8.08e-23	-	-	-	L	-	-	-	Transposase
BNEFENCH_02660	1.49e-197	-	-	-	L	-	-	-	PFAM Integrase catalytic
BNEFENCH_02661	5.72e-123	-	-	-	U	-	-	-	AAA domain
BNEFENCH_02662	1.05e-57	tnpA1	-	-	L	-	-	-	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
BNEFENCH_02663	1.4e-84	rfbP	-	-	M	ko:K13012,ko:K19428	-	ko00000,ko01000,ko01005	Bacterial sugar transferase
BNEFENCH_02664	3.97e-41	-	-	-	S	ko:K07011	-	ko00000	Glycosyl transferase family 2
BNEFENCH_02665	2.73e-165	rfbD	1.1.1.133	-	M	ko:K00067	ko00521,ko00523,ko01130,map00521,map00523,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
BNEFENCH_02666	6.58e-215	rfbB	4.2.1.46	-	M	ko:K01710	ko00521,ko00523,ko00525,ko01055,ko01130,map00521,map00523,map00525,map01055,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
BNEFENCH_02667	2.45e-128	rfbC	5.1.3.13	-	M	ko:K01790	ko00521,ko00523,ko01130,map00521,map00523,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
BNEFENCH_02668	6.02e-174	rfbA	2.7.7.24	-	H	ko:K00973	ko00521,ko00523,ko00525,ko01130,map00521,map00523,map00525,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
BNEFENCH_02669	2.56e-58	wbbK	-	-	M	-	-	-	transferase activity, transferring glycosyl groups
BNEFENCH_02670	2.62e-77	-	-	-	M	-	-	-	Glycosyl transferases group 1
BNEFENCH_02672	2.06e-29	-	-	-	M	-	-	-	Glycosyltransferase like family 2
BNEFENCH_02673	3.17e-58	-	-	-	S	-	-	-	Polysaccharide pyruvyl transferase
BNEFENCH_02674	1.66e-41	murB	1.3.1.98	-	M	ko:K00075	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation
BNEFENCH_02675	3.72e-140	-	-	-	S	-	-	-	Polysaccharide biosynthesis protein
BNEFENCH_02676	1.76e-15	-	-	-	-	-	-	-	-
BNEFENCH_02677	1.02e-63	-	-	-	L	ko:K07484	-	ko00000	IS66 Orf2 like protein
BNEFENCH_02678	1.39e-140	-	-	-	L	-	-	-	Transposase IS66 family
BNEFENCH_02679	6.08e-84	rpsI	-	-	J	ko:K02996	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uS9 family
BNEFENCH_02680	2.98e-104	rplM	-	-	J	ko:K02871	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
BNEFENCH_02681	5.95e-140	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
BNEFENCH_02682	7.16e-236	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	FtsX-like permease family
BNEFENCH_02683	8.64e-163	lolD	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
BNEFENCH_02684	1.5e-44	-	-	-	-	-	-	-	-
BNEFENCH_02685	8.89e-169	tipA	-	-	K	-	-	-	TipAS antibiotic-recognition domain
BNEFENCH_02686	1.39e-178	truA	5.4.99.12	-	J	ko:K06173	-	ko00000,ko01000,ko03016	Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
BNEFENCH_02687	1.13e-181	ecfT	-	-	U	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
BNEFENCH_02688	1.92e-202	ecfA2	-	-	P	ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
BNEFENCH_02689	1.15e-197	ecfA1	-	-	P	ko:K16786	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
BNEFENCH_02690	1.92e-139	-	-	-	-	-	-	-	-
BNEFENCH_02691	5.46e-81	rplQ	-	-	J	ko:K02879	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L17
BNEFENCH_02692	1.26e-218	rpoA	2.7.7.6	-	K	ko:K03040	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
BNEFENCH_02693	3.82e-82	rpsK	-	-	J	ko:K02948	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
BNEFENCH_02694	5.37e-76	rpsM	-	-	J	ko:K02952	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
BNEFENCH_02695	6.38e-20	rpmJ	-	-	J	ko:K02919	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL36 family
BNEFENCH_02696	4.15e-46	infA	-	-	J	ko:K02518	-	ko00000,ko03012	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
BNEFENCH_02697	1.29e-155	adk	2.7.4.3	-	F	ko:K00939	ko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
BNEFENCH_02698	4.06e-303	secY	-	-	U	ko:K03076	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
BNEFENCH_02699	4.07e-92	rplO	-	-	J	ko:K02876	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to the 23S rRNA
BNEFENCH_02700	2.6e-33	rpmD	-	-	J	ko:K02907	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L30
BNEFENCH_02701	5.74e-109	rpsE	-	-	J	ko:K02988	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
BNEFENCH_02702	3.26e-76	rplR	-	-	J	ko:K02881	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
BNEFENCH_02703	2.61e-123	rplF	-	-	J	ko:K02933	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
BNEFENCH_02704	1.32e-88	rpsH	-	-	J	ko:K02994	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
BNEFENCH_02705	8.67e-124	rplE	-	-	J	ko:K02931	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
BNEFENCH_02706	4.1e-67	rplX	-	-	J	ko:K02895	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
BNEFENCH_02707	1.73e-77	rplN	-	-	J	ko:K02874	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
BNEFENCH_02708	5.93e-55	rpsQ	-	-	J	ko:K02961	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
BNEFENCH_02709	3.55e-33	rpmC	-	-	J	ko:K02904	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uL29 family
BNEFENCH_02710	1.38e-98	rplP	-	-	J	ko:K02878	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
BNEFENCH_02711	6.88e-152	rpsC	-	-	J	ko:K02982	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
BNEFENCH_02712	4.5e-73	rplV	-	-	J	ko:K02890	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
BNEFENCH_02713	5.26e-63	rpsS	-	-	J	ko:K02965	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
BNEFENCH_02714	7.23e-201	rplB	-	-	J	ko:K02886	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
BNEFENCH_02715	1.02e-61	rplW	-	-	J	ko:K02892	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
BNEFENCH_02716	1.98e-140	rplD	-	-	J	ko:K02926	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the polypeptide exit tunnel
BNEFENCH_02717	1.15e-145	rplC	-	-	J	ko:K02906	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
BNEFENCH_02718	4.46e-66	rpsJ	-	-	J	ko:K02946	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Involved in the binding of tRNA to the ribosomes
BNEFENCH_02719	3.63e-90	psiE	-	-	S	ko:K13256	-	ko00000	Phosphate-starvation-inducible E
BNEFENCH_02720	2.38e-138	ahpC	1.11.1.15	-	O	ko:K03386	ko04214,map04214	ko00000,ko00001,ko01000,ko04147	C-terminal domain of 1-Cys peroxiredoxin
BNEFENCH_02721	1.44e-256	-	-	-	K	-	-	-	WYL domain
BNEFENCH_02722	0.0	fusA	-	-	J	ko:K02355	-	ko00000,ko03012,ko03029	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
BNEFENCH_02723	2.06e-108	rpsG	-	-	J	ko:K02992	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
BNEFENCH_02724	1.11e-92	rpsL	-	-	J	ko:K02950	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
BNEFENCH_02725	0.0	-	-	-	M	-	-	-	domain protein
BNEFENCH_02726	0.0	-	-	-	M	-	-	-	domain protein
BNEFENCH_02727	1.27e-47	-	3.4.23.43	-	-	ko:K02236	-	ko00000,ko00002,ko01000,ko02044	-
BNEFENCH_02728	0.0	rpoC	2.7.7.6	-	K	ko:K03046	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
BNEFENCH_02729	0.0	rpoB	2.7.7.6	-	K	ko:K03043	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
BNEFENCH_02730	0.0	clpC	-	-	O	ko:K03696	ko01100,map01100	ko00000,ko03110	Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
BNEFENCH_02731	4.32e-105	ctsR	-	-	K	ko:K03708	-	ko00000,ko03000	Belongs to the CtsR family
BNEFENCH_02741	5.45e-146	alkD	-	-	L	-	-	-	DNA alkylation repair enzyme
BNEFENCH_02742	7.16e-163	rpiA	5.3.1.6	-	G	ko:K01807	ko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
BNEFENCH_02743	1.75e-60	-	-	-	M	-	-	-	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
BNEFENCH_02744	8.74e-161	-	-	-	H	-	-	-	Pfam:Transaldolase
BNEFENCH_02745	9.11e-84	-	2.7.1.198	-	G	ko:K02781	ko00051,ko02060,map00051,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system glucitol/sorbitol-specific IIA component
BNEFENCH_02746	2.82e-259	srlE	2.7.1.198	-	G	ko:K02782,ko:K02783	ko00051,ko02060,map00051,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Sorbitol phosphotransferase enzyme II N-terminus
BNEFENCH_02747	2.36e-130	srlA	-	-	G	ko:K02783	ko00051,ko02060,map00051,map02060	ko00000,ko00001,ko00002,ko02000	PTS system enzyme II sorbitol-specific factor
BNEFENCH_02748	2.63e-115	srlM1	-	-	K	-	-	-	Glucitol operon activator protein (GutM)
BNEFENCH_02749	0.0	srlM	-	-	GKT	ko:K03491	-	ko00000,ko03000	Mga helix-turn-helix domain
BNEFENCH_02750	1.68e-184	srlD2	1.1.1.140	-	IQ	ko:K00068	ko00051,map00051	ko00000,ko00001,ko01000	NAD dependent epimerase/dehydratase family
BNEFENCH_02751	4.97e-93	araD	5.1.3.4	-	G	ko:K03077	ko00040,ko00053,ko01100,ko01120,map00040,map00053,map01100,map01120	ko00000,ko00001,ko00002,ko01000	links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source
BNEFENCH_02752	9.31e-56	araD	5.1.3.4	-	G	ko:K03077	ko00040,ko00053,ko01100,ko01120,map00040,map00053,map01100,map01120	ko00000,ko00001,ko00002,ko01000	links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source
BNEFENCH_02753	2.92e-193	-	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
BNEFENCH_02754	3.53e-76	sga	5.1.3.22	-	G	ko:K03079	ko00040,ko00053,ko01100,ko01120,map00040,map00053,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Xylose isomerase-like TIM barrel
BNEFENCH_02755	1.32e-111	sga	5.1.3.22	-	G	ko:K03079	ko00040,ko00053,ko01100,ko01120,map00040,map00053,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Xylose isomerase-like TIM barrel
BNEFENCH_02756	1.05e-92	-	-	-	K	-	-	-	DeoR C terminal sensor domain
BNEFENCH_02757	1.4e-58	-	-	-	L	ko:K07483	-	ko00000	Homeodomain-like domain
BNEFENCH_02758	1.86e-87	-	-	-	L	ko:K07497	-	ko00000	transposition
BNEFENCH_02759	1.47e-122	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
BNEFENCH_02760	3.85e-51	-	-	-	V	-	-	-	Domain of unknown function (DUF3883)
BNEFENCH_02764	6.41e-283	sip	-	-	L	-	-	-	Belongs to the 'phage' integrase family
BNEFENCH_02765	1.03e-37	-	-	-	K	-	-	-	Cro/C1-type HTH DNA-binding domain
BNEFENCH_02767	6.61e-79	-	-	-	-	-	-	-	-
BNEFENCH_02768	5.45e-26	-	-	-	-	-	-	-	-
BNEFENCH_02769	4.38e-35	-	-	-	-	-	-	-	-
BNEFENCH_02770	5.2e-46	-	-	-	-	-	-	-	-
BNEFENCH_02771	5.98e-26	-	-	-	-	-	-	-	-
BNEFENCH_02772	4.2e-203	-	-	-	L	-	-	-	Bifunctional DNA primase/polymerase, N-terminal
BNEFENCH_02773	0.0	-	-	-	S	-	-	-	Virulence-associated protein E
BNEFENCH_02776	4.66e-105	terS	-	-	L	-	-	-	Phage terminase, small subunit
BNEFENCH_02777	0.0	terL	-	-	S	-	-	-	overlaps another CDS with the same product name
BNEFENCH_02778	1.48e-29	-	-	-	-	-	-	-	-
BNEFENCH_02779	2.93e-279	-	-	-	S	-	-	-	Phage portal protein
BNEFENCH_02780	0.0	-	-	-	S	ko:K06904	-	ko00000	Phage capsid family
BNEFENCH_02781	2.28e-63	-	-	-	S	-	-	-	Phage gp6-like head-tail connector protein
BNEFENCH_02782	4.82e-18	-	-	-	S	-	-	-	Phage head-tail joining protein
BNEFENCH_02783	2.3e-23	-	-	-	-	-	-	-	-
BNEFENCH_02784	1.4e-35	ytgB	-	-	S	-	-	-	Transglycosylase associated protein
BNEFENCH_02786	1.87e-217	prs2	2.7.6.1	-	F	ko:K00948	ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
BNEFENCH_02787	2.32e-233	-	-	-	D	ko:K06889	-	ko00000	Alpha beta
BNEFENCH_02788	2.16e-238	lipA	-	-	I	-	-	-	Carboxylesterase family
BNEFENCH_02789	1.68e-275	mtlD	1.1.1.17	-	C	ko:K00009	ko00051,map00051	ko00000,ko00001,ko01000	mannitol-1-phosphate 5-dehydrogenase activity
BNEFENCH_02790	9.2e-101	mtlF	2.7.1.197	-	G	ko:K02798	ko00051,ko02060,map00051,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
BNEFENCH_02791	0.0	mtlR	-	-	K	ko:K03483	-	ko00000,ko03000	Mga helix-turn-helix domain
BNEFENCH_02792	0.0	mtlA	2.7.1.197	-	G	ko:K02799,ko:K02800	ko00051,ko02060,map00051,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
BNEFENCH_02793	2.09e-169	nagB	3.5.99.6	-	G	ko:K02564	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
BNEFENCH_02794	1.84e-190	-	-	-	S	-	-	-	haloacid dehalogenase-like hydrolase
BNEFENCH_02795	3.44e-58	-	-	-	-	-	-	-	-
BNEFENCH_02796	6.72e-19	-	-	-	-	-	-	-	-
BNEFENCH_02797	1.51e-238	hlyD3	-	-	M	ko:K02005	-	ko00000	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BNEFENCH_02798	2.9e-160	-	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter
BNEFENCH_02799	2.95e-264	yknZ	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	MacB-like periplasmic core domain
BNEFENCH_02800	0.0	-	-	-	M	-	-	-	Leucine rich repeats (6 copies)
BNEFENCH_02801	1.05e-253	ypjH	-	-	C	ko:K08317	-	ko00000,ko01000	dehydrogenase
BNEFENCH_02802	1.53e-288	amd	-	-	E	-	-	-	Peptidase family M20/M25/M40
BNEFENCH_02803	1.48e-104	-	-	-	S	-	-	-	Threonine/Serine exporter, ThrE
BNEFENCH_02804	3.8e-175	labL	-	-	S	-	-	-	Putative threonine/serine exporter
BNEFENCH_02806	0.0	gidA	-	-	D	ko:K03495	-	ko00000,ko03016,ko03036	NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
BNEFENCH_02807	0.0	mnmE	-	-	S	ko:K03650	-	ko00000,ko01000,ko03016	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
BNEFENCH_02808	8.23e-170	jag	-	-	S	ko:K06346	-	ko00000	R3H domain protein
BNEFENCH_02809	1.04e-177	yidC	-	-	U	ko:K03217	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044,ko03029	Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
BNEFENCH_02810	2.99e-77	rnpA	3.1.26.5	-	J	ko:K03536	-	ko00000,ko01000,ko03016	RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
BNEFENCH_02811	3.26e-23	rpmH	-	-	J	ko:K02914	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL34 family
BNEFENCH_02812	0.0	dnaA	-	-	L	ko:K02313	ko02020,ko04112,map02020,map04112	ko00000,ko00001,ko03032,ko03036	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
BNEFENCH_02813	1.02e-260	dnaN	2.7.7.7	-	L	ko:K02338	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
BNEFENCH_02814	3.83e-201	-	-	-	F	ko:K15051	-	ko00000	DNA/RNA non-specific endonuclease
BNEFENCH_02816	1.94e-125	-	3.1.21.3	-	V	ko:K01154	-	ko00000,ko01000,ko02048	Type I restriction modification DNA specificity domain
BNEFENCH_02817	0.0	hsdM	2.1.1.72	-	V	ko:K03427	-	ko00000,ko01000,ko02048	type I restriction-modification system
BNEFENCH_02818	2.05e-154	hsdR	3.1.21.3	-	V	ko:K01153	-	ko00000,ko01000,ko02048	Subunit R is required for both nuclease and ATPase activities, but not for modification
BNEFENCH_02819	0.0	hsdR	3.1.21.3	-	V	ko:K01153	-	ko00000,ko01000,ko02048	Subunit R is required for both nuclease and ATPase activities, but not for modification
BNEFENCH_02822	6.3e-138	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
BNEFENCH_02824	1.51e-173	nfrA	1.5.1.38	-	C	ko:K19285	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	nitroreductase
BNEFENCH_02825	3.4e-37	-	-	-	-	-	-	-	-
BNEFENCH_02826	1.02e-107	-	-	-	L	-	-	-	Belongs to the N(4) N(6)-methyltransferase family
BNEFENCH_02829	2.26e-212	mccA	2.5.1.134, 2.5.1.47	-	E	ko:K01738,ko:K17216	ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the cysteine synthase cystathionine beta- synthase family
BNEFENCH_02830	1.28e-273	mccB	4.4.1.1, 4.4.1.2, 4.4.1.8	-	E	ko:K01760,ko:K17217	ko00260,ko00270,ko00450,ko00920,ko01100,ko01110,ko01130,ko01230,map00260,map00270,map00450,map00920,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	cystathionine
BNEFENCH_02831	3.38e-128	cysE	2.3.1.30	-	E	ko:K00640	ko00270,ko00920,ko01100,ko01110,ko01120,ko01200,ko01230,ko05111,map00270,map00920,map01100,map01110,map01120,map01200,map01230,map05111	ko00000,ko00001,ko00002,ko01000	Bacterial transferase hexapeptide (six repeats)
BNEFENCH_02832	2.05e-178	-	-	-	L	-	-	-	Transposase DDE domain
BNEFENCH_02833	2.56e-41	-	-	-	L	-	-	-	Putative transposase of IS4/5 family (DUF4096)
BNEFENCH_02834	3.16e-67	-	-	-	L	-	-	-	Transposase DDE domain
BNEFENCH_02836	2.94e-99	-	-	-	L	-	-	-	Initiator Replication protein
BNEFENCH_02838	1.21e-06	-	-	-	-	-	-	-	-
BNEFENCH_02840	3.55e-162	tnp1216	-	-	L	ko:K07498	-	ko00000	DDE domain
BNEFENCH_02841	4.99e-31	-	-	-	-	-	-	-	-
BNEFENCH_02843	2.43e-36	pinR1	-	-	L	-	-	-	Helix-turn-helix domain of Hin and related proteins, a family of DNA-binding domains unique to bacteria and represented by the Hin protein of Salmonella. The basic HTH domain is a simple fold comprised of three core helices that form a right-handed
BNEFENCH_02844	2.25e-71	-	-	-	L	-	-	-	Resolvase, N terminal domain
BNEFENCH_02845	3.83e-61	-	-	-	L	-	-	-	BRCA1 C Terminus (BRCT) domain
BNEFENCH_02846	1.69e-98	-	-	-	L	-	-	-	Initiator Replication protein
BNEFENCH_02848	2.07e-165	-	3.1.21.3	-	V	ko:K01154	-	ko00000,ko01000,ko02048	Type I restriction modification DNA specificity domain
BNEFENCH_02850	2.14e-163	tnp1216	-	-	L	ko:K07498	-	ko00000	DDE domain
BNEFENCH_02852	2.16e-44	-	2.7.1.208	-	G	ko:K02777,ko:K20107,ko:K20108	ko00010,ko00500,ko00520,ko02026,ko02060,ko05111,map00010,map00500,map00520,map02026,map02060,map05111	ko00000,ko00001,ko00002,ko01000,ko02000	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
BNEFENCH_02853	4.91e-15	-	-	-	-	-	-	-	-
BNEFENCH_02855	4.81e-105	-	-	-	L	-	-	-	Protein involved in initiation of plasmid replication
BNEFENCH_02856	0.0	treB	-	-	G	ko:K02755,ko:K02756,ko:K02757	ko02060,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
BNEFENCH_02857	0.0	treC	3.2.1.93	GH13	G	ko:K01226	ko00500,map00500	ko00000,ko00001,ko01000	Alpha amylase, catalytic domain protein
BNEFENCH_02858	1.82e-165	treR	-	-	K	ko:K03486	-	ko00000,ko03000	UTRA
BNEFENCH_02859	2.11e-68	-	-	-	L	-	-	-	Initiator Replication protein
BNEFENCH_02863	1.19e-67	ybfG	-	-	M	-	-	-	peptidoglycan-binding domain-containing protein
BNEFENCH_02864	5.68e-164	tnp1216	-	-	L	ko:K07498	-	ko00000	DDE domain
BNEFENCH_02865	1.23e-56	-	-	-	M	-	-	-	Glycosyl transferases group 1
BNEFENCH_02867	1.68e-177	nfrA	1.5.1.38	-	C	ko:K19285	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	nitroreductase
BNEFENCH_02868	2.93e-190	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
BNEFENCH_02869	2.79e-225	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
BNEFENCH_02870	3.29e-73	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
BNEFENCH_02871	3.84e-65	-	-	-	S	-	-	-	Bacterial toxin of type II toxin-antitoxin system, YafQ
BNEFENCH_02872	4.96e-44	-	-	-	L	-	-	-	RelB antitoxin
BNEFENCH_02873	2.4e-62	-	-	-	L	-	-	-	Putative transposase of IS4/5 family (DUF4096)
BNEFENCH_02874	1.92e-71	-	-	-	-	-	-	-	-
BNEFENCH_02875	1.29e-84	-	-	-	-	-	-	-	-
BNEFENCH_02876	6.94e-218	-	1.1.1.29	-	CH	ko:K00018	ko00260,ko00630,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,map00260,map00630,map00680,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BNEFENCH_02877	1.58e-87	-	-	-	L	-	-	-	Psort location Cytoplasmic, score
BNEFENCH_02878	1.9e-18	-	-	-	L	-	-	-	Psort location Cytoplasmic, score
BNEFENCH_02879	2.81e-149	ybbL	-	-	S	ko:K02068	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
BNEFENCH_02880	2.44e-165	ybbM	-	-	S	ko:K02069	-	ko00000,ko00002,ko02000	Uncharacterised protein family (UPF0014)