ORF_ID e_value Gene_name EC_number CAZy COGs KEGG_ko KEGG_Pathway BRITE Description
PCJBFFDM_00001 0.0 dnaA - - L ko:K02313 ko02020,ko04112,map02020,map04112 ko00000,ko00001,ko03032,ko03036 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
PCJBFFDM_00002 1.09e-260 dnaN 2.7.7.7 - L ko:K02338 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
PCJBFFDM_00003 1.35e-299 recF - - L ko:K03629 ko03440,map03440 ko00000,ko00001,ko03400 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
PCJBFFDM_00004 1.01e-115 - - - S - - - Protein of unknown function (DUF721)
PCJBFFDM_00005 0.0 gyrB 5.99.1.3 - L ko:K02470 - ko00000,ko01000,ko03032,ko03400 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PCJBFFDM_00006 0.0 gyrA 5.99.1.3 - L ko:K02469 - ko00000,ko01000,ko03032,ko03400 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PCJBFFDM_00007 5.13e-106 - - - S - - - Transmembrane domain of unknown function (DUF3566)
PCJBFFDM_00008 0.0 gdhA 1.4.1.4 - E ko:K00262 ko00220,ko00250,ko00910,ko01100,map00220,map00250,map00910,map01100 ko00000,ko00001,ko01000 Belongs to the Glu Leu Phe Val dehydrogenases family
PCJBFFDM_00009 1.43e-93 mscL - - M ko:K03282 - ko00000,ko02000 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
PCJBFFDM_00013 3.41e-142 - - - S ko:K07043 - ko00000 Protein of unknown function DUF45
PCJBFFDM_00014 9.42e-239 ldh 1.1.1.27 - C ko:K00016 ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922 ko00000,ko00001,ko01000,ko04147 Belongs to the LDH MDH superfamily
PCJBFFDM_00015 6.78e-306 - - - P ko:K03699 - ko00000,ko02042 Transporter associated domain
PCJBFFDM_00016 1.67e-153 cah 4.2.1.1 - P ko:K01673 ko00910,map00910 ko00000,ko00001,ko01000 Reversible hydration of carbon dioxide
PCJBFFDM_00017 2.22e-231 - - - - - - - -
PCJBFFDM_00018 0.0 ppc 4.1.1.31 - H ko:K01595 ko00620,ko00680,ko00710,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00710,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
PCJBFFDM_00019 0.0 - - - S - - - Threonine/Serine exporter, ThrE
PCJBFFDM_00020 0.0 - - - E ko:K11928 - ko00000,ko02000 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
PCJBFFDM_00021 6.48e-263 trpS 6.1.1.2 - J ko:K01867 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the class-I aminoacyl-tRNA synthetase family
PCJBFFDM_00022 1.49e-64 - - - S - - - Protein of unknown function (DUF3073)
PCJBFFDM_00023 2.6e-81 - - - I - - - Sterol carrier protein
PCJBFFDM_00024 0.0 glgP 2.4.1.1 GT35 G ko:K00688 ko00500,ko01100,ko01110,ko02026,ko04217,ko04910,ko04922,ko04931,map00500,map01100,map01110,map02026,map04217,map04910,map04922,map04931 ko00000,ko00001,ko01000 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
PCJBFFDM_00025 1.33e-47 - - - - - - - -
PCJBFFDM_00026 4.68e-190 gluP 3.4.21.105 - S ko:K19225 - ko00000,ko01000,ko01002 Rhomboid family
PCJBFFDM_00027 5.58e-307 - - - L - - - ribosomal rna small subunit methyltransferase
PCJBFFDM_00028 2.28e-90 crgA - - D - - - Involved in cell division
PCJBFFDM_00029 6.45e-182 - - - S - - - Bacterial protein of unknown function (DUF881)
PCJBFFDM_00030 1.36e-266 srtB 3.4.22.70 - M ko:K07284 - ko00000,ko01000,ko01002,ko01011 Sortase family
PCJBFFDM_00031 2.92e-148 trpG 2.6.1.85, 4.1.3.27 - EH ko:K01658,ko:K01664 ko00400,ko00405,ko00790,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00400,map00405,map00790,map01100,map01110,map01130,map01230,map02024,map02025 ko00000,ko00001,ko00002,ko01000 para-aminobenzoate synthase glutamine amidotransferase component II
PCJBFFDM_00032 0.0 pknB 2.7.11.1 - KLT ko:K08884,ko:K12132 - ko00000,ko01000,ko01001 Protein tyrosine kinase
PCJBFFDM_00033 4.29e-227 pknA 2.7.11.1 - T ko:K08884,ko:K12132 - ko00000,ko01000,ko01001 Protein tyrosine kinase
PCJBFFDM_00034 0.0 pbpA - - M ko:K05364 ko00550,map00550 ko00000,ko00001,ko01011 penicillin-binding protein
PCJBFFDM_00035 0.0 rodA - - D ko:K03588 ko04112,map04112 ko00000,ko00001,ko02000,ko03036 Belongs to the SEDS family
PCJBFFDM_00036 0.0 pstP 3.1.3.16 - T ko:K20074 - ko00000,ko01000,ko01009 Sigma factor PP2C-like phosphatases
PCJBFFDM_00037 1.57e-108 fhaB - - T - - - Inner membrane component of T3SS, cytoplasmic domain
PCJBFFDM_00038 2.6e-168 fhaA - - T - - - Protein of unknown function (DUF2662)
PCJBFFDM_00039 0.0 pepX 3.4.14.5 - E ko:K01278 ko04974,map04974 ko00000,ko00001,ko01000,ko01002,ko04090,ko04147 Dipeptidyl peptidase IV (DPP IV) N-terminal region
PCJBFFDM_00040 7.37e-291 - - - T - - - Histidine kinase
PCJBFFDM_00041 4.46e-145 - - - K - - - helix_turn_helix, Lux Regulon
PCJBFFDM_00042 4.68e-243 pldB 3.1.1.5 - I ko:K01048 ko00564,map00564 ko00000,ko00001,ko01000 Serine aminopeptidase, S33
PCJBFFDM_00043 1.57e-215 - - - EG - - - EamA-like transporter family
PCJBFFDM_00044 8.46e-111 - - - S ko:K07118 - ko00000 NAD(P)H-binding
PCJBFFDM_00045 4.33e-58 - - - K - - - HxlR-like helix-turn-helix
PCJBFFDM_00047 0.0 tgt 2.4.2.29 - F ko:K00773 - ko00000,ko01000,ko03016 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
PCJBFFDM_00048 0.0 degP - - O ko:K08372 ko02020,map02020 ko00000,ko00001,ko01000,ko01002 Domain present in PSD-95, Dlg, and ZO-1/2.
PCJBFFDM_00049 0.0 - 3.6.3.4, 3.6.3.54 - P ko:K01533,ko:K17686 ko01524,ko04016,map01524,map04016 ko00000,ko00001,ko01000 E1-E2 ATPase
PCJBFFDM_00050 2.62e-239 ansA 3.5.1.1 - EJ ko:K01424 ko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110 ko00000,ko00001,ko01000 Asparaginase
PCJBFFDM_00051 0.0 fprA 1.18.1.2, 1.19.1.1 - C ko:K00528 - ko00000,ko01000 Pyridine nucleotide-disulphide oxidoreductase
PCJBFFDM_00052 3.13e-213 htpX - - O ko:K03799 - ko00000,ko00002,ko01000,ko01002 Belongs to the peptidase M48B family
PCJBFFDM_00054 4.38e-88 - - - K - - - Helix-turn-helix XRE-family like proteins
PCJBFFDM_00055 1.65e-217 - - - EG - - - EamA-like transporter family
PCJBFFDM_00056 0.0 - - - S ko:K01421 - ko00000 YhgE Pip domain protein
PCJBFFDM_00057 0.0 - - - S ko:K01421 - ko00000 YhgE Pip domain protein
PCJBFFDM_00058 2.49e-261 fbaA 4.1.2.13 - G ko:K01624 ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Fructose-bisphosphate aldolase class-II
PCJBFFDM_00059 2.21e-314 purA 6.3.4.4 - F ko:K01939 ko00230,ko00250,ko01100,map00230,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
PCJBFFDM_00060 0.0 - - - P ko:K03281 - ko00000 Voltage gated chloride channel
PCJBFFDM_00061 7.88e-231 crcB - - U ko:K06199 - ko00000,ko02000 Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PCJBFFDM_00062 5.18e-81 crcB - - U ko:K06199 - ko00000,ko02000 Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PCJBFFDM_00063 2.41e-41 livK - - E ko:K01999 ko02010,ko02024,map02010,map02024 ko00000,ko00001,ko00002,ko02000 Receptor family ligand binding region
PCJBFFDM_00064 5.58e-249 - - - K ko:K03484 - ko00000,ko03000 helix_turn _helix lactose operon repressor
PCJBFFDM_00065 0.0 gtfA 2.4.1.7 GH13 G ko:K00690 ko00500,map00500 ko00000,ko00001,ko01000 Domain of unknown function (DUF1964)
PCJBFFDM_00066 9.94e-14 - - - S - - - Protein of unknown function, DUF624
PCJBFFDM_00067 0.0 scrT - - G - - - Transporter major facilitator family protein
PCJBFFDM_00068 3.01e-309 - - - EGP - - - Sugar (and other) transporter
PCJBFFDM_00069 1.19e-258 ilvC 1.1.1.86 - H ko:K00053 ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00770,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
PCJBFFDM_00070 2.05e-257 ilvC 1.1.1.86 - H ko:K00053 ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00770,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
PCJBFFDM_00071 0.0 - 3.1.1.53 - E ko:K05970 - ko00000,ko01000 Carbohydrate esterase, sialic acid-specific acetylesterase
PCJBFFDM_00072 6.7e-196 - - - E - - - GDSL-like Lipase/Acylhydrolase family
PCJBFFDM_00073 0.0 bglA 3.2.1.21 - G ko:K05350 ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110 ko00000,ko00001,ko01000 Glycosyl hydrolase family 1
PCJBFFDM_00074 6.96e-278 - - - G - - - Bacterial extracellular solute-binding protein
PCJBFFDM_00075 1.36e-227 - - - U ko:K02025 - ko00000,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
PCJBFFDM_00076 1.97e-183 - - - U ko:K02026 - ko00000,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
PCJBFFDM_00077 0.0 - 3.2.1.25 - G ko:K01192 ko00511,ko04142,map00511,map04142 ko00000,ko00001,ko01000 beta-mannosidase
PCJBFFDM_00078 6.6e-231 - - - K - - - helix_turn _helix lactose operon repressor
PCJBFFDM_00079 1.57e-106 - - - S - - - Protein of unknown function, DUF624
PCJBFFDM_00080 0.0 - 3.2.1.22 - G ko:K07407 ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603 ko00000,ko00001,ko01000 Glycosyl hydrolase family 36 N-terminal domain
PCJBFFDM_00081 2.91e-131 - - - - - - - -
PCJBFFDM_00082 0.0 aroP - - E ko:K03293,ko:K11732 - ko00000,ko02000 aromatic amino acid transport protein AroP K03293
PCJBFFDM_00083 0.0 - - - V ko:K02004 - ko00000,ko00002,ko02000 FtsX-like permease family
PCJBFFDM_00084 1.42e-309 - - - P - - - Sodium/hydrogen exchanger family
PCJBFFDM_00085 1.4e-100 - - - S - - - Psort location Cytoplasmic, score 8.87
PCJBFFDM_00086 3.97e-239 - 3.4.22.70 - M ko:K07284 - ko00000,ko01000,ko01002,ko01011 Sortase family
PCJBFFDM_00087 0.0 - - - M - - - domain protein
PCJBFFDM_00088 1.74e-244 - - - M - - - LPXTG cell wall anchor motif
PCJBFFDM_00089 6.5e-115 - - - S - - - Psort location Cytoplasmic, score 8.87
PCJBFFDM_00090 0.0 - - - E ko:K03293 - ko00000 Amino acid permease
PCJBFFDM_00092 1.79e-214 thiG 2.8.1.10 - H ko:K03149 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko01000 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S
PCJBFFDM_00093 2.05e-166 thiF 2.7.7.73 - H ko:K03148 ko00730,ko01100,ko04122,map00730,map01100,map04122 ko00000,ko00001,ko01000 ThiF family
PCJBFFDM_00094 2.72e-34 thiS - - H ko:K03154 ko04122,map04122 ko00000,ko00001 ThiS family
PCJBFFDM_00095 5.57e-198 - - - C - - - Aldo/keto reductase family
PCJBFFDM_00096 2.63e-74 - - - K - - - helix_turn_helix multiple antibiotic resistance protein
PCJBFFDM_00097 0.0 - - - V ko:K06147 - ko00000,ko02000 ABC transporter, ATP-binding protein
PCJBFFDM_00098 0.0 - - - V ko:K06147 - ko00000,ko02000 ABC transporter transmembrane region
PCJBFFDM_00099 1.42e-154 - 2.7.1.180 - H ko:K03734 - ko00000,ko01000 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
PCJBFFDM_00100 1.26e-303 - - - G - - - MFS/sugar transport protein
PCJBFFDM_00101 0.0 - - - P ko:K07243 - ko00000,ko02000 Iron permease FTR1 family
PCJBFFDM_00102 7.78e-133 - - - P ko:K07230 - ko00000,ko02000 Fe2+ transport protein
PCJBFFDM_00103 1.62e-293 - - - S - - - Predicted membrane protein (DUF2318)
PCJBFFDM_00104 1.7e-287 - - - V ko:K02004 - ko00000,ko00002,ko02000 ABC transporter permease
PCJBFFDM_00105 2.38e-267 - - - V ko:K02004 - ko00000,ko00002,ko02000 FtsX-like permease family
PCJBFFDM_00106 1.69e-192 - - - V ko:K02003 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
PCJBFFDM_00107 4.79e-103 - - - S - - - FMN_bind
PCJBFFDM_00108 1.85e-118 - - - K - - - Psort location Cytoplasmic, score 8.87
PCJBFFDM_00109 0.0 - - - S ko:K01421 - ko00000 YhgE Pip domain protein
PCJBFFDM_00110 0.0 - - - S ko:K01421 - ko00000 YhgE Pip domain protein
PCJBFFDM_00111 1.73e-288 - - - S - - - Putative ABC-transporter type IV
PCJBFFDM_00112 2.38e-50 nrdH - - O ko:K06191 - ko00000 Glutaredoxin
PCJBFFDM_00113 0.0 - - - M - - - cell wall binding repeat
PCJBFFDM_00115 0.0 - - - E ko:K08659 - ko00000,ko01000,ko01002 Peptidase family C69
PCJBFFDM_00116 1.37e-249 - 2.7.8.12 - M ko:K09809 - ko00000,ko01000 Glycosyltransferase like family 2
PCJBFFDM_00117 2.42e-152 icaR - - K - - - Bacterial regulatory proteins, tetR family
PCJBFFDM_00118 1.43e-251 ftsY - - U ko:K03110 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
PCJBFFDM_00119 1.45e-302 amt - - U ko:K03320 - ko00000,ko02000 Ammonium Transporter Family
PCJBFFDM_00120 2.56e-72 glnB - - K ko:K04751 ko02020,map02020 ko00000,ko00001 Nitrogen regulatory protein P-II
PCJBFFDM_00121 0.0 glnD 2.7.7.59 - O ko:K00990 ko02020,map02020 ko00000,ko00001,ko01000 Nucleotidyltransferase domain
PCJBFFDM_00122 0.0 dnaB 3.6.4.12 - L ko:K02314 ko03030,ko04112,map03030,map04112 ko00000,ko00001,ko01000,ko03032 Participates in initiation and elongation during chromosome replication
PCJBFFDM_00123 0.0 murE - - M - - - Domain of unknown function (DUF1727)
PCJBFFDM_00124 1.14e-175 cobQ2 - - S ko:K07009 - ko00000 CobB/CobQ-like glutamine amidotransferase domain
PCJBFFDM_00125 4.06e-42 - - - S - - - granule-associated protein
PCJBFFDM_00126 0.0 - - - S ko:K03688 - ko00000 ABC1 family
PCJBFFDM_00127 1.6e-246 - - - K ko:K02529 - ko00000,ko03000 Periplasmic binding protein domain
PCJBFFDM_00128 5.38e-316 - - - G ko:K02027 - ko00000,ko00002,ko02000 Bacterial extracellular solute-binding protein
PCJBFFDM_00130 5.95e-214 - - - P ko:K02025,ko:K10189 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
PCJBFFDM_00131 3.39e-187 - - - G ko:K02026 - ko00000,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
PCJBFFDM_00132 0.0 - 3.2.1.185 GH127 S ko:K09955,ko:K18205 - ko00000,ko01000 Beta-L-arabinofuranosidase, GH127
PCJBFFDM_00133 0.0 - 3.2.1.187 GH121 DG ko:K18206 - ko00000,ko01000 Bacterial Ig-like domain (group 4)
PCJBFFDM_00134 0.0 - - - G - - - Bacterial Ig-like domain (group 4)
PCJBFFDM_00135 1.33e-262 glpQ 3.1.4.46 - C ko:K01126 ko00564,map00564 ko00000,ko00001,ko01000 Glycerophosphoryl diester phosphodiesterase family
PCJBFFDM_00136 6.66e-151 upp 2.4.2.9 - F ko:K00761 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko01000 Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
PCJBFFDM_00137 8.12e-134 - - - - - - - -
PCJBFFDM_00138 1.08e-287 mutT 3.6.1.55 - LT ko:K03574 - ko00000,ko01000,ko03400 Phosphoglycerate mutase family
PCJBFFDM_00139 0.0 ppk 2.7.4.1 - P ko:K00937 ko00190,ko03018,map00190,map03018 ko00000,ko00001,ko01000,ko03019 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
PCJBFFDM_00141 6.13e-182 - - - D - - - bacterial-type flagellum organization
PCJBFFDM_00142 1.46e-237 cpaF - - U ko:K02283 - ko00000,ko02035,ko02044 Type II IV secretion system protein
PCJBFFDM_00143 1.5e-162 - - - U ko:K12510 - ko00000,ko02044 Type ii secretion system
PCJBFFDM_00144 9.43e-116 - - - NU - - - Type II secretion system (T2SS), protein F
PCJBFFDM_00145 3.15e-56 - - - S - - - Protein of unknown function (DUF4244)
PCJBFFDM_00146 1.8e-79 - - - U - - - TadE-like protein
PCJBFFDM_00147 9.25e-71 - - - S - - - TIGRFAM helicase secretion neighborhood TadE-like protein
PCJBFFDM_00148 9.99e-273 - 2.7.1.107 - I ko:K07029 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 ko00000,ko00001,ko01000 Diacylglycerol kinase catalytic domain protein
PCJBFFDM_00149 6.51e-249 - - - S - - - Psort location CytoplasmicMembrane, score
PCJBFFDM_00150 1.57e-128 - - - K - - - Bacterial regulatory proteins, tetR family
PCJBFFDM_00151 0.0 dnaX 2.7.7.7 - L ko:K02343 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase III subunit gamma tau
PCJBFFDM_00152 3.18e-136 recR - - L ko:K06187 ko03440,map03440 ko00000,ko00001,ko03400 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
PCJBFFDM_00153 7.1e-175 ask 2.7.2.4 - E ko:K00928 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Amino acid kinase family
PCJBFFDM_00154 1.17e-125 ask 2.7.2.4 - E ko:K00928 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 ACT domain
PCJBFFDM_00155 5.73e-264 asd 1.2.1.11 - E ko:K00133 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
PCJBFFDM_00157 8.81e-148 - - - - - - - -
PCJBFFDM_00158 0.0 - - - S - - - Calcineurin-like phosphoesterase
PCJBFFDM_00159 0.0 leuA 2.3.3.13 - E ko:K01649 ko00290,ko00620,ko01100,ko01110,ko01210,ko01230,map00290,map00620,map01100,map01110,map01210,map01230 br01601,ko00000,ko00001,ko00002,ko01000 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
PCJBFFDM_00160 0.0 - 3.2.1.99 GH43 G ko:K06113 - ko00000,ko01000 C-terminal of Glycosyl hydrolases family 43
PCJBFFDM_00161 0.0 - 3.2.1.99 GH43 G ko:K06113 - ko00000,ko01000 C-terminal of Glycosyl hydrolases family 43
PCJBFFDM_00162 0.0 - - - G - - - Glycosyl hydrolases family 43
PCJBFFDM_00163 9.31e-251 - - - K - - - helix_turn _helix lactose operon repressor
PCJBFFDM_00164 8.04e-260 - - - G - - - Glycosyl hydrolases family 43
PCJBFFDM_00165 0.0 - - - G ko:K02027 - ko00000,ko00002,ko02000 Bacterial extracellular solute-binding protein
PCJBFFDM_00166 7.58e-217 - - - G ko:K02025 - ko00000,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
PCJBFFDM_00167 3.71e-206 - - - U ko:K02026 - ko00000,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
PCJBFFDM_00168 0.0 - - - S ko:K09955 - ko00000 Beta-L-arabinofuranosidase, GH127
PCJBFFDM_00169 0.0 pbp5 - - M - - - Transglycosylase
PCJBFFDM_00170 1.1e-276 ino1 5.5.1.4 - I ko:K01858 ko00521,ko00562,ko01100,ko01130,map00521,map00562,map01100,map01130 ko00000,ko00001,ko01000 Myo-inositol-1-phosphate synthase
PCJBFFDM_00171 1.55e-298 glf 5.4.99.9 - M ko:K01854 ko00052,ko00520,map00052,map00520 ko00000,ko00001,ko01000 UDP-galactopyranose mutase
PCJBFFDM_00172 2.61e-244 - - - I - - - PAP2 superfamily
PCJBFFDM_00173 0.0 topA 5.99.1.2 - L ko:K03168 - ko00000,ko01000,ko03032,ko03400 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
PCJBFFDM_00174 8.6e-145 tmk 2.7.4.9 - F ko:K00943 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
PCJBFFDM_00175 1.21e-250 holB 2.7.7.7 - L ko:K02341 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase III
PCJBFFDM_00176 2.06e-236 - - - K ko:K02529 - ko00000,ko03000 helix_turn _helix lactose operon repressor
PCJBFFDM_00177 6.22e-52 hpr - - G ko:K11189 - ko00000,ko02000 PTS HPr component phosphorylation site
PCJBFFDM_00178 0.0 ptsI 2.7.3.9 - G ko:K08483 ko02060,map02060 ko00000,ko00001,ko01000,ko02000 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
PCJBFFDM_00179 5.02e-139 - - - S ko:K06910 - ko00000 Phosphatidylethanolamine-binding protein
PCJBFFDM_00180 0.0 pepD - - E ko:K08659 - ko00000,ko01000,ko01002 Peptidase family C69
PCJBFFDM_00181 0.0 fhs 6.3.4.3 - F ko:K01938 ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Formate-tetrahydrofolate ligase
PCJBFFDM_00182 2.72e-82 - - - S - - - Macrophage migration inhibitory factor (MIF)
PCJBFFDM_00183 3.16e-125 - - - S - - - GtrA-like protein
PCJBFFDM_00184 0.0 - - - EGP - - - Major Facilitator Superfamily
PCJBFFDM_00185 1.24e-158 - - - G - - - Phosphoglycerate mutase family
PCJBFFDM_00186 1.86e-242 - - - - - - - -
PCJBFFDM_00187 2.17e-199 - - - S - - - Protein of unknown function (DUF805)
PCJBFFDM_00188 0.0 gltX 6.1.1.17 - J ko:K01885 ko00860,ko00970,ko01100,ko01110,ko01120,map00860,map00970,map01100,map01110,map01120 ko00000,ko00001,ko00002,ko01000,ko01007,ko02048,ko03016 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
PCJBFFDM_00191 0.0 - - - S - - - Calcineurin-like phosphoesterase
PCJBFFDM_00192 1.9e-180 ltbR - - K - - - Transcriptional regulator, IclR family, C-terminal domain protein
PCJBFFDM_00193 0.0 leuC 4.2.1.33, 4.2.1.35 - E ko:K01703 ko00290,ko00660,ko00966,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map00966,map01100,map01110,map01210,map01230 br01601,ko00000,ko00001,ko00002,ko01000 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
PCJBFFDM_00194 2.1e-169 leuD 4.2.1.33, 4.2.1.35 - E ko:K01704 ko00290,ko00660,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map01100,map01110,map01210,map01230 br01601,ko00000,ko00001,ko00002,ko01000 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
PCJBFFDM_00195 6.6e-259 pyr 1.3.98.1 - F ko:K00226 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Dihydroorotate dehydrogenase
PCJBFFDM_00196 0.0 murA 2.5.1.7 - M ko:K00790 ko00520,ko00550,ko01100,map00520,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PCJBFFDM_00197 4.08e-224 plsC2 2.3.1.51 - I ko:K00655 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko01004 Phosphate acyltransferases
PCJBFFDM_00198 1.31e-228 gpsA 1.1.1.94 - I ko:K00057 ko00564,ko01110,map00564,map01110 ko00000,ko00001,ko01000 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
PCJBFFDM_00199 1.56e-278 ddl 6.3.2.4 - F ko:K01921 ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502 ko00000,ko00001,ko01000,ko01011 Belongs to the D-alanine--D-alanine ligase family
PCJBFFDM_00200 1.58e-226 - - - S - - - CAAX protease self-immunity
PCJBFFDM_00201 1.96e-177 - - - M - - - Mechanosensitive ion channel
PCJBFFDM_00202 5.84e-293 - - - S - - - Psort location Cytoplasmic, score 8.87
PCJBFFDM_00203 2.18e-289 - - - S - - - Psort location Cytoplasmic, score 8.87
PCJBFFDM_00204 2.71e-160 - - - K - - - Bacterial regulatory proteins, tetR family
PCJBFFDM_00205 1.13e-293 - 2.6.1.1 - E ko:K11358 ko00220,ko00250,ko00270,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko01000,ko01007 Psort location Cytoplasmic, score 8.87
PCJBFFDM_00206 2.35e-211 gnd 1.1.1.343, 1.1.1.44 - G ko:K00033 ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 6-phosphogluconate dehydrogenase, C-terminal domain
PCJBFFDM_00208 5.57e-290 gnuT - - EG ko:K03299 - ko00000,ko02000 GntP family permease
PCJBFFDM_00209 9.76e-102 gntK 2.7.1.12 - F ko:K00851 ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko01000 Shikimate kinase
PCJBFFDM_00210 1.01e-165 gntR - - K - - - FCD
PCJBFFDM_00211 8.58e-307 - - - S ko:K06902 ko04138,map04138 ko00000,ko00001,ko02000,ko04131 Vacuole effluxer Atg22 like
PCJBFFDM_00212 0.0 - - - S - - - Psort location Cytoplasmic, score 8.87
PCJBFFDM_00213 1.82e-41 rpmB - - J ko:K02902 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal L28 family
PCJBFFDM_00214 0.0 recG 3.6.4.12 - L ko:K03655 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 helicase superfamily c-terminal domain
PCJBFFDM_00215 5.76e-111 rsmD 2.1.1.171 - L ko:K08316 - ko00000,ko01000,ko03009 Conserved hypothetical protein 95
PCJBFFDM_00216 3.94e-112 - - - K - - - helix_turn_helix, arabinose operon control protein
PCJBFFDM_00217 1.9e-182 - - - EGP - - - Major Facilitator Superfamily
PCJBFFDM_00218 3.21e-187 - - - I - - - alpha/beta hydrolase fold
PCJBFFDM_00219 1.36e-192 trmD 2.1.1.228 - J ko:K00554 - ko00000,ko01000,ko03016 Belongs to the RNA methyltransferase TrmD family
PCJBFFDM_00220 1.21e-135 rimM - - J ko:K02860 - ko00000,ko03009 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
PCJBFFDM_00221 5.05e-47 - - - S ko:K06960 - ko00000 Belongs to the UPF0109 family
PCJBFFDM_00222 7.94e-83 rpsP - - J ko:K02959 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011,ko03029 Belongs to the bacterial ribosomal protein bS16 family
PCJBFFDM_00223 6.82e-230 - - - S - - - Endonuclease/Exonuclease/phosphatase family
PCJBFFDM_00224 0.0 ffh 3.6.5.4 - U ko:K03106 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko01000,ko02044 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
PCJBFFDM_00225 0.0 cysS 6.1.1.16 - J ko:K01883 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the class-I aminoacyl-tRNA synthetase family
PCJBFFDM_00226 3.99e-194 - 6.3.5.2 - F ko:K01951 ko00230,ko00983,ko01100,map00230,map00983,map01100 ko00000,ko00001,ko00002,ko01000,ko01002 Peptidase C26
PCJBFFDM_00227 0.0 yjjK - - S ko:K15738 - ko00000,ko02000 ABC transporter
PCJBFFDM_00228 5.43e-122 - - - - - - - -
PCJBFFDM_00230 1.54e-118 ilvN 2.2.1.6 - E ko:K01653 ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 ACT domain
PCJBFFDM_00231 0.0 ilvB 2.2.1.6 - H ko:K01652 ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Thiamine pyrophosphate enzyme, central domain
PCJBFFDM_00232 8.48e-178 rnc 3.1.26.3 - J ko:K03685 ko03008,ko05205,map03008,map05205 ko00000,ko00001,ko01000,ko03009,ko03019,ko03036 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
PCJBFFDM_00233 8.1e-36 rpmF - - J ko:K02911 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011,ko03029 Belongs to the bacterial ribosomal protein bL32 family
PCJBFFDM_00234 1.03e-147 - - - S ko:K07040 - ko00000 Uncharacterized ACR, COG1399
PCJBFFDM_00235 8.17e-169 - - - - - - - -
PCJBFFDM_00236 6.03e-114 coaD 2.7.7.3 - H ko:K00954 ko00770,ko01100,map00770,map01100 ko00000,ko00001,ko00002,ko01000 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
PCJBFFDM_00237 1.02e-76 - - - S - - - Protein of unknown function (DUF3039)
PCJBFFDM_00238 6.86e-249 - - - C ko:K19265 - ko00000,ko01000 Aldo/keto reductase family
PCJBFFDM_00239 2.47e-101 - - - K - - - MerR, DNA binding
PCJBFFDM_00240 2.49e-156 rdgB 3.6.1.66 - F ko:K02428 ko00230,map00230 ko00000,ko00001,ko01000 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
PCJBFFDM_00241 2.31e-180 rph 2.7.7.56 - J ko:K00989 - ko00000,ko01000,ko03016 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
PCJBFFDM_00242 0.0 pncB 6.3.4.21 - F ko:K00763 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko01000 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
PCJBFFDM_00243 7.23e-301 - - - V ko:K12554 ko00550,ko01100,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Psort location Cytoplasmic, score 8.87
PCJBFFDM_00244 1.1e-296 - - - V ko:K12554 ko00550,ko01100,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Psort location Cytoplasmic, score 8.87
PCJBFFDM_00247 7.15e-232 - - - S ko:K07088 - ko00000 Auxin Efflux Carrier
PCJBFFDM_00248 0.0 pgi 5.3.1.9 - G ko:K01810 ko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the GPI family
PCJBFFDM_00249 3.37e-79 rplS - - J ko:K02884 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
PCJBFFDM_00250 1.4e-158 lepB 3.4.21.89 - U ko:K03100 ko02024,ko03060,map02024,map03060 ko00000,ko00001,ko01000,ko01002 Belongs to the peptidase S26 family
PCJBFFDM_00251 2.21e-176 rnhB 3.1.26.4 - L ko:K03470 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PCJBFFDM_00252 1.13e-165 lolD - - V ko:K02003 - ko00000,ko00002,ko02000 ATPases associated with a variety of cellular activities
PCJBFFDM_00253 0.0 - - - V - - - Efflux ABC transporter, permease protein
PCJBFFDM_00254 3.73e-212 - - - S ko:K07088 - ko00000 Transporter, auxin efflux carrier (AEC) family protein
PCJBFFDM_00255 6.81e-293 dapE 3.5.1.18 - E ko:K01439 ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230 ko00000,ko00001,ko00002,ko01000 Peptidase dimerisation domain
PCJBFFDM_00256 0.0 rne 3.1.26.12 - J ko:K08300,ko:K08301 ko03018,map03018 ko00000,ko00001,ko00002,ko01000,ko03009,ko03019 Ribonuclease E/G family
PCJBFFDM_00257 1.19e-61 rplU - - J ko:K02888 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This protein binds to 23S rRNA in the presence of protein L20
PCJBFFDM_00258 3.53e-52 rpmA - - J ko:K02899 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal L27 protein
PCJBFFDM_00259 0.0 obg - - S ko:K03979 - ko00000,ko01000,ko03009 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
PCJBFFDM_00260 3.06e-261 proB 2.7.2.11 - E ko:K00931 ko00330,ko00332,ko01100,ko01130,ko01230,map00330,map00332,map01100,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
PCJBFFDM_00261 4.69e-296 aspC 2.6.1.1, 2.6.1.2, 2.6.1.66 - E ko:K00812,ko:K08969,ko:K14260 ko00220,ko00250,ko00270,ko00290,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00290,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 DegT/DnrJ/EryC1/StrS aminotransferase family
PCJBFFDM_00263 3.48e-44 secE - - U ko:K03073 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
PCJBFFDM_00264 4.5e-168 nusG - - K ko:K02601 - ko00000,ko03009,ko03021 Participates in transcription elongation, termination and antitermination
PCJBFFDM_00265 5.21e-95 rplK - - J ko:K02867 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
PCJBFFDM_00266 1.18e-157 rplA - - J ko:K02863 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
PCJBFFDM_00267 7.46e-183 - - - QT - - - PucR C-terminal helix-turn-helix domain
PCJBFFDM_00268 0.0 - - - - - - - -
PCJBFFDM_00269 2.27e-185 birA 6.3.4.15 - H ko:K03524 ko00780,ko01100,map00780,map01100 ko00000,ko00001,ko01000,ko03000 Biotin/lipoate A/B protein ligase family
PCJBFFDM_00270 7.34e-115 bioY - - S ko:K03523 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 BioY family
PCJBFFDM_00271 0.0 accC 6.3.4.14, 6.4.1.2, 6.4.1.3 - I ko:K11263 ko00061,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200,map01212 ko00000,ko00001,ko00002,ko01000 Carbamoyl-phosphate synthase L chain, ATP binding domain protein
PCJBFFDM_00272 0.0 pccB - - I - - - Carboxyl transferase domain
PCJBFFDM_00273 0.0 fas - - I ko:K11533 ko00061,ko01100,ko01212,ko04931,map00061,map01100,map01212,map04931 ko00000,ko00001,ko00002,ko01000,ko01004 Beta-ketoacyl synthase, C-terminal domain
PCJBFFDM_00275 1.77e-107 acpS 2.7.8.7 - I ko:K00997 ko00770,map00770 ko00000,ko00001,ko01000 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
PCJBFFDM_00276 0.0 ams 2.4.1.4 GH13 G ko:K05341 ko00500,map00500 ko00000,ko00001,ko01000 Alpha amylase, catalytic domain
PCJBFFDM_00278 1.89e-151 - - - - - - - -
PCJBFFDM_00279 2.04e-56 rpsO - - J ko:K02956 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
PCJBFFDM_00280 0.0 pnp 2.7.7.8 - J ko:K00962 ko00230,ko00240,ko03018,map00230,map00240,map03018 ko00000,ko00001,ko00002,ko01000,ko03016,ko03019 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction
PCJBFFDM_00281 8.51e-118 lemA - - S ko:K03744 - ko00000 LemA family
PCJBFFDM_00282 0.0 - - - S - - - Predicted membrane protein (DUF2207)
PCJBFFDM_00283 1.53e-217 - - - C - - - Oxidoreductase, aldo keto reductase family protein
PCJBFFDM_00284 0.0 - - - O ko:K08303 ko05120,map05120 ko00000,ko00001,ko01000,ko01002 Peptidase family U32 C-terminal domain
PCJBFFDM_00285 4.67e-234 yfiH - - Q ko:K05810 - ko00000,ko01000 Multi-copper polyphenol oxidoreductase laccase
PCJBFFDM_00286 9.79e-193 ispD 1.1.1.405, 2.7.7.40, 2.7.7.60 - I ko:K00991,ko:K21681 ko00040,ko00900,ko01100,ko01110,ko01130,map00040,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP)
PCJBFFDM_00287 8.36e-162 pcp 3.4.19.3 - O ko:K01304 - ko00000,ko01000,ko01002 Removes 5-oxoproline from various penultimate amino acid residues except L-proline
PCJBFFDM_00288 7.66e-147 - - - D - - - nuclear chromosome segregation
PCJBFFDM_00289 0.0 pepC2 3.4.22.40 - E ko:K01372 - ko00000,ko01000,ko01002 Peptidase C1-like family
PCJBFFDM_00290 4.41e-270 aroG 2.5.1.54 - E ko:K01626 ko00400,ko01100,ko01110,ko01130,ko01230,ko02024,map00400,map01100,map01110,map01130,map01230,map02024 ko00000,ko00001,ko00002,ko01000 Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
PCJBFFDM_00291 1.44e-281 aroG 2.5.1.54 - E ko:K01626 ko00400,ko01100,ko01110,ko01130,ko01230,ko02024,map00400,map01100,map01110,map01130,map01230,map02024 ko00000,ko00001,ko00002,ko01000 Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
PCJBFFDM_00292 4.26e-158 mtnN 3.2.2.9 - E ko:K01243 ko00270,ko01100,ko01230,map00270,map01100,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
PCJBFFDM_00293 6.84e-279 phoR 2.7.13.3 - T ko:K07636,ko:K07768 ko02020,map02020 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 His Kinase A (phosphoacceptor) domain
PCJBFFDM_00294 2.31e-166 regX3 - - KT ko:K07776 ko02020,map02020 ko00000,ko00001,ko00002,ko02022 Transcriptional regulatory protein, C terminal
PCJBFFDM_00295 5.23e-257 pstS - - P ko:K02040 ko02010,ko02020,ko05152,map02010,map02020,map05152 ko00000,ko00001,ko00002,ko02000 Part of the ABC transporter complex PstSACB involved in phosphate import
PCJBFFDM_00296 2.6e-209 pstC - - P ko:K02037 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 probably responsible for the translocation of the substrate across the membrane
PCJBFFDM_00297 1.92e-218 pstA - - P ko:K02038 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Phosphate transport system permease
PCJBFFDM_00298 6.41e-190 pstB 3.6.3.27 - P ko:K02036 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PCJBFFDM_00299 9.03e-184 - - - P ko:K02077 - ko00000,ko00002,ko02000 Zinc-uptake complex component A periplasmic
PCJBFFDM_00300 9.45e-315 - - - S ko:K06901 - ko00000,ko02000 Permease family
PCJBFFDM_00301 5.91e-114 rplJ - - J ko:K02864 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
PCJBFFDM_00302 5.66e-69 rplL - - J ko:K02935 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
PCJBFFDM_00303 2.17e-231 - - - T - - - Forkhead associated domain
PCJBFFDM_00304 0.0 - - - L - - - Superfamily I DNA and RNA helicases and helicase subunits
PCJBFFDM_00305 2.8e-47 - - - - - - - -
PCJBFFDM_00306 3.71e-117 - - - NO - - - SAF
PCJBFFDM_00307 2.78e-41 - - - S - - - Putative regulatory protein
PCJBFFDM_00308 1.23e-129 ygfA 6.3.3.2 - H ko:K01934 ko00670,ko01100,map00670,map01100 ko00000,ko00001,ko01000 5-formyltetrahydrofolate cyclo-ligase family
PCJBFFDM_00309 6.34e-155 rimJ 2.3.1.128 - J ko:K03790 - ko00000,ko01000,ko03009 Acetyltransferase (GNAT) domain
PCJBFFDM_00310 4.21e-215 - - - - - - - -
PCJBFFDM_00311 3.49e-63 groS - - O ko:K04078 - ko00000,ko03029,ko03110 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
PCJBFFDM_00315 7.79e-35 rpmG - - J ko:K02913 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal protein L33
PCJBFFDM_00316 2.35e-267 murB 1.3.1.98 - M ko:K00075 ko00520,ko00550,ko01100,map00520,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Cell wall formation
PCJBFFDM_00317 0.0 - - - E ko:K03294 - ko00000 aromatic amino acid transport protein AroP K03293
PCJBFFDM_00318 2.61e-78 fdxA - - C ko:K05524 - ko00000 4Fe-4S binding domain
PCJBFFDM_00319 6.53e-271 dapC - - E - - - Aminotransferase class I and II
PCJBFFDM_00320 1.74e-41 - 3.1.1.53 - G ko:K05970 - ko00000,ko01000 Glycosyl hydrolase family 2, sugar binding domain protein
PCJBFFDM_00321 0.0 - - - G - - - Psort location Cytoplasmic, score 8.87
PCJBFFDM_00322 3.23e-298 - 3.2.1.156 GH8 G ko:K15531 - ko00000,ko01000 CBM9 module, glycoside hydrolase family 8 protein and carbohydrate esterase family 4 protein K01238
PCJBFFDM_00323 0.0 - - - G - - - candidate polyfunctional acetylxylan esterase b-xylosidase A-L-arabinofuranosidase, CBM9 module, glycoside hydrolase family 43 protein and carbohydrate esterase family 6 protein K01238
PCJBFFDM_00324 0.0 - - CE10 I ko:K03929 - ko00000,ko01000 Belongs to the type-B carboxylesterase lipase family
PCJBFFDM_00326 1.07e-283 dinB 2.7.7.7 - L ko:K02346 - ko00000,ko01000,ko03400 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
PCJBFFDM_00327 0.0 - - - M ko:K07282 - ko00000 Bacterial capsule synthesis protein PGA_cap
PCJBFFDM_00328 1.35e-237 pdxB - - EH - - - Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PCJBFFDM_00329 7.75e-145 yigZ - - S - - - Uncharacterized protein family UPF0029
PCJBFFDM_00330 1.05e-158 - - - - - - - -
PCJBFFDM_00331 0.0 malQ 2.4.1.25 GH77 G ko:K00705 ko00500,ko01100,map00500,map01100 ko00000,ko00001,ko01000 4-alpha-glucanotransferase
PCJBFFDM_00332 2.26e-104 rplM - - J ko:K02871 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
PCJBFFDM_00333 1.21e-99 rpsI - - J ko:K02996 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the universal ribosomal protein uS9 family
PCJBFFDM_00334 0.0 glgX 3.2.1.196, 3.2.1.68 CBM48,GH13 G ko:K01214,ko:K02438 ko00500,ko01100,ko01110,map00500,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Belongs to the glycosyl hydrolase 13 family
PCJBFFDM_00335 2.55e-100 - - - E - - - Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PCJBFFDM_00336 2.01e-275 - - - GK - - - transcriptional repressor of nag (N-acetylglucosamine) operon K02565
PCJBFFDM_00337 3.02e-305 csbX - - EGP - - - Major Facilitator Superfamily
PCJBFFDM_00338 2.11e-250 - 1.1.1.9 - C ko:K05351 ko00040,ko01100,map00040,map01100 ko00000,ko00001,ko00002,ko01000 Zinc-binding dehydrogenase
PCJBFFDM_00339 4.86e-233 - - - K - - - helix_turn_helix, arabinose operon control protein
PCJBFFDM_00340 0.0 adhE 1.1.1.1, 1.2.1.10, 1.2.1.81 - C ko:K04072,ko:K15515 ko00010,ko00071,ko00350,ko00620,ko00625,ko00626,ko00650,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00620,map00625,map00626,map00650,map01100,map01110,map01120,map01130,map01220 ko00000,ko00001,ko01000 belongs to the iron- containing alcohol dehydrogenase family
PCJBFFDM_00341 5.42e-67 rpsJ - - J ko:K02946 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Involved in the binding of tRNA to the ribosomes
PCJBFFDM_00342 1.64e-151 rplC - - J ko:K02906 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
PCJBFFDM_00343 3.02e-151 rplD - - J ko:K02926 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms part of the polypeptide exit tunnel
PCJBFFDM_00344 8.86e-62 rplW - - J ko:K02892 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
PCJBFFDM_00345 2.71e-195 rplB - - J ko:K02886 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
PCJBFFDM_00346 3.44e-63 rpsS - - J ko:K02965 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
PCJBFFDM_00347 5.42e-75 rplV - - J ko:K02890 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
PCJBFFDM_00348 2.74e-147 rpsC - - J ko:K02982 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
PCJBFFDM_00349 3.85e-98 rplP - - J ko:K02878 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
PCJBFFDM_00350 1.37e-50 rpmC - - J ko:K02904 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the universal ribosomal protein uL29 family
PCJBFFDM_00351 5.52e-55 rpsQ - - J ko:K02961 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
PCJBFFDM_00352 2.55e-79 rplN - - J ko:K02874 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
PCJBFFDM_00353 1.81e-67 rplX - - J ko:K02895 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
PCJBFFDM_00354 1.6e-133 rplE - - J ko:K02931 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
PCJBFFDM_00355 4.1e-39 rpsN - - J ko:K02954 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PCJBFFDM_00356 3.93e-90 rpsH - - J ko:K02994 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
PCJBFFDM_00357 5.66e-124 rplF - - J ko:K02933 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
PCJBFFDM_00358 1.86e-77 rplR - - J ko:K02881 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
PCJBFFDM_00359 5.14e-130 rpsE - - J ko:K02988 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
PCJBFFDM_00360 1.24e-35 rpmD - - J ko:K02907 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal protein L30p/L7e
PCJBFFDM_00361 4.21e-95 rplO - - J ko:K02876 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 binds to the 23S rRNA
PCJBFFDM_00362 5.9e-314 secY - - U ko:K03076 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
PCJBFFDM_00363 3e-127 adk 2.7.4.3 - F ko:K00939 ko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000,ko04147 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
PCJBFFDM_00364 6.91e-45 infA - - J ko:K02518 - ko00000,ko03012 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
PCJBFFDM_00365 1.47e-20 rpmJ - - J ko:K02919 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL36 family
PCJBFFDM_00366 6.96e-83 rpsM - - J ko:K02952 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
PCJBFFDM_00367 1.48e-85 rpsK - - J ko:K02948 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
PCJBFFDM_00368 6.43e-238 rpoA 2.7.7.6 - K ko:K03040 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PCJBFFDM_00369 1.21e-87 rplQ - - J ko:K02879 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal protein L17
PCJBFFDM_00370 1.29e-232 truA 5.4.99.12 - J ko:K06173 - ko00000,ko01000,ko03016 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
PCJBFFDM_00372 3.63e-141 - - - - - - - -
PCJBFFDM_00373 4.21e-243 nusA - - K ko:K02600 - ko00000,ko03009,ko03021 Participates in both transcription termination and antitermination
PCJBFFDM_00374 0.0 infB - - J ko:K02519 - ko00000,ko03012,ko03029 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
PCJBFFDM_00375 1.9e-98 rbfA - - J ko:K02834 - ko00000,ko03009 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
PCJBFFDM_00376 4.09e-240 truB 5.4.99.25 - J ko:K03177 - ko00000,ko01000,ko03016 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
PCJBFFDM_00377 3.95e-275 ribF 2.7.1.26, 2.7.7.2 - H ko:K11753 ko00740,ko01100,ko01110,map00740,map01100,map01110 ko00000,ko00001,ko00002,ko01000 riboflavin kinase
PCJBFFDM_00378 0.0 radA - - O ko:K04485 - ko00000,ko03400 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
PCJBFFDM_00379 2.31e-140 - - - - - - - -
PCJBFFDM_00380 5.05e-07 - - - S - - - Mitochondrial domain of unknown function (DUF1713)
PCJBFFDM_00381 2.41e-163 rpiA 5.3.1.6 - G ko:K01807 ko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
PCJBFFDM_00382 4.23e-276 rnhA 3.1.26.4 - L ko:K03469 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PCJBFFDM_00383 0.0 - - - T - - - GHKL domain
PCJBFFDM_00384 2.94e-195 - - - T - - - LytTr DNA-binding domain
PCJBFFDM_00385 0.0 pgm 5.4.2.2 - G ko:K01835 ko00010,ko00030,ko00052,ko00230,ko00500,ko00520,ko00521,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00052,map00230,map00500,map00520,map00521,map01100,map01110,map01120,map01130 ko00000,ko00001,ko00002,ko01000 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
PCJBFFDM_00386 0.0 ptsG - - G ko:K02755,ko:K02756,ko:K02757 ko02060,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 pts system, glucose-specific IIABC component
PCJBFFDM_00387 3.44e-204 arbG - - K ko:K03488 - ko00000,ko03000 CAT RNA binding domain
PCJBFFDM_00388 2.42e-263 - - - I - - - Diacylglycerol kinase catalytic domain
PCJBFFDM_00389 4.35e-312 serS 6.1.1.11 - J ko:K01875 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
PCJBFFDM_00391 1.68e-239 - - - O - - - ADP-ribosylglycohydrolase
PCJBFFDM_00392 1.86e-242 - - - G - - - pfkB family carbohydrate kinase
PCJBFFDM_00393 0.0 - - - U ko:K03457 - ko00000 Permease for cytosine/purines, uracil, thiamine, allantoin
PCJBFFDM_00394 8.3e-134 - - - Q - - - Isochorismatase family
PCJBFFDM_00395 8.88e-273 - - - S - - - Choline/ethanolamine kinase
PCJBFFDM_00396 0.0 - - - E ko:K16238 - ko00000,ko02000 Amino acid permease
PCJBFFDM_00397 0.0 - - - H - - - Aminotransferase class-III
PCJBFFDM_00398 1.18e-181 - - - K ko:K03489,ko:K03710 - ko00000,ko03000 UTRA
PCJBFFDM_00399 6.84e-156 tcsR3 - - K - - - helix_turn_helix, Lux Regulon
PCJBFFDM_00400 0.0 tcsS3 - - KT - - - PspC domain
PCJBFFDM_00401 8e-195 pspC - - KT - - - PspC domain
PCJBFFDM_00402 3.18e-120 - - - - - - - -
PCJBFFDM_00403 7.16e-147 - - - S - - - Protein of unknown function (DUF4125)
PCJBFFDM_00404 0.0 - - - S - - - Domain of unknown function (DUF4037)
PCJBFFDM_00405 2.9e-275 - - - EGP ko:K08156,ko:K19577 - ko00000,ko02000 Major Facilitator Superfamily
PCJBFFDM_00407 0.0 lysS 6.1.1.6 - J ko:K04567 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the class-II aminoacyl-tRNA synthetase family
PCJBFFDM_00408 1.13e-242 - - - K ko:K02529 - ko00000,ko03000 helix_turn _helix lactose operon repressor
PCJBFFDM_00409 0.0 - - - G ko:K03292 - ko00000 Psort location CytoplasmicMembrane, score 10.00
PCJBFFDM_00410 2.99e-125 - - - S ko:K06889 - ko00000 Serine aminopeptidase, S33
PCJBFFDM_00411 9.62e-270 menA 2.5.1.74 - H ko:K02548 ko00130,ko01100,ko01110,map00130,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko01006 Belongs to the MenA family. Type 1 subfamily
PCJBFFDM_00412 1.83e-178 gpmA 5.4.2.11 - G ko:K01834 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PCJBFFDM_00413 0.0 - 4.2.1.53 - S ko:K10254 - ko00000,ko01000 MCRA family
PCJBFFDM_00414 8.62e-133 phoU - - P ko:K02039 - ko00000 Plays a role in the regulation of phosphate uptake
PCJBFFDM_00415 1.5e-273 senX3 2.7.13.3 - T ko:K07768 ko02020,map02020 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 ATPase histidine kinase DNA gyrase B HSP90 domain protein
PCJBFFDM_00416 3.36e-55 - - - - - - - -
PCJBFFDM_00417 5.66e-279 serC 2.6.1.52 - E ko:K00831 ko00260,ko00680,ko00750,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map00750,map01100,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
PCJBFFDM_00418 6.95e-212 - - - S - - - CHAP domain
PCJBFFDM_00419 2.95e-135 - - - M ko:K21471 - ko00000,ko01000,ko01002,ko01011 NlpC/P60 family
PCJBFFDM_00420 3.51e-240 - - - T - - - Universal stress protein family
PCJBFFDM_00421 1.07e-94 - - - O - - - OsmC-like protein
PCJBFFDM_00422 6.89e-232 thyA 2.1.1.45 - F ko:K00560 ko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523 ko00000,ko00001,ko00002,ko01000 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
PCJBFFDM_00423 1.29e-161 folA 1.5.1.3 - H ko:K00287 ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523 ko00000,ko00001,ko00002,ko01000 dihydrofolate reductase
PCJBFFDM_00424 0.0 - - - J ko:K18220 - br01600,ko00000,ko01504 elongation factor G
PCJBFFDM_00425 8.88e-112 ptpA 3.1.3.48 - T ko:K01104 - ko00000,ko01000 low molecular weight
PCJBFFDM_00427 3.01e-254 galE 5.1.3.2 - M ko:K01784 ko00052,ko00520,ko01100,map00052,map00520,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the NAD(P)-dependent epimerase dehydratase family
PCJBFFDM_00428 1.08e-216 trmB 2.1.1.33 - J ko:K03439 - ko00000,ko01000,ko03016 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
PCJBFFDM_00432 0.0 - 5.1.3.2 - GM ko:K01784 ko00052,ko00520,ko01100,map00052,map00520,map01100 ko00000,ko00001,ko00002,ko01000 ADP-glyceromanno-heptose 6-epimerase activity
PCJBFFDM_00433 8.5e-213 - - - - - - - -
PCJBFFDM_00434 0.0 - - - S - - - Uncharacterised protein conserved in bacteria (DUF2194)
PCJBFFDM_00435 0.0 - - GT4 M ko:K21011 ko02025,map02025 ko00000,ko00001,ko01003 Domain of unknown function (DUF3492)
PCJBFFDM_00436 0.0 - - - S ko:K21012 ko02025,map02025 ko00000,ko00001 Putative exopolysaccharide Exporter (EPS-E)
PCJBFFDM_00437 0.0 - - - M ko:K06330 - ko00000 CotH kinase protein
PCJBFFDM_00438 6.72e-204 - - - P - - - VTC domain
PCJBFFDM_00439 2.54e-144 - - - S - - - Domain of unknown function (DUF4956)
PCJBFFDM_00440 0.0 - 3.1.4.52 - T ko:K14051 ko02024,ko02026,map02024,map02026 ko00000,ko00001,ko01000 Putative diguanylate phosphodiesterase
PCJBFFDM_00441 1.73e-270 fucO 1.1.1.77, 1.1.99.37, 1.2.98.1 - C ko:K00048,ko:K17067 ko00625,ko00630,ko00640,ko00680,ko01120,ko01200,map00625,map00630,map00640,map00680,map01120,map01200 ko00000,ko00001,ko01000 Iron-containing alcohol dehydrogenase
PCJBFFDM_00442 3.15e-230 - - - M - - - Glycosyltransferase like family 2
PCJBFFDM_00443 1.95e-314 - - - S - - - AI-2E family transporter
PCJBFFDM_00444 7.67e-293 - - - M - - - Glycosyl transferase family 21
PCJBFFDM_00445 6.78e-297 dacB 3.4.16.4 - M ko:K07259 ko00550,map00550 ko00000,ko00001,ko01000,ko01002,ko01011 D-Ala-D-Ala carboxypeptidase 3 (S13) family
PCJBFFDM_00446 1.33e-253 tilS 2.4.2.8, 6.3.4.19 - J ko:K00760,ko:K04075 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 ko00000,ko00001,ko01000,ko03016 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
PCJBFFDM_00447 1.72e-128 hpt 2.4.2.8 - F ko:K00760 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 ko00000,ko00001,ko01000 Belongs to the purine pyrimidine phosphoribosyltransferase family
PCJBFFDM_00448 0.0 ftsH - - O ko:K03798 - ko00000,ko00002,ko01000,ko01002,ko03110 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
PCJBFFDM_00449 2.51e-150 folE 3.5.4.16 - H ko:K01495 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko00002,ko01000 GTP cyclohydrolase
PCJBFFDM_00450 1.19e-197 folP 2.5.1.15 - H ko:K00796 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
PCJBFFDM_00451 0.0 folK 2.7.6.3, 4.1.2.25 - H ko:K00950,ko:K13940 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
PCJBFFDM_00452 1.05e-121 - - - S - - - Protein of unknown function (DUF3180)
PCJBFFDM_00453 9.2e-211 tesB - - I ko:K10805 ko01040,map01040 ko00000,ko00001,ko01000,ko01004 Thioesterase-like superfamily
PCJBFFDM_00454 0.0 yjjK - - S - - - ATP-binding cassette protein, ChvD family
PCJBFFDM_00455 1.1e-230 - - - V - - - Beta-lactamase
PCJBFFDM_00456 1.39e-92 fms 3.5.1.88 - J ko:K01462 - ko00000,ko01000 Removes the formyl group from the N-terminal Met of newly synthesized proteins
PCJBFFDM_00457 8.38e-221 - 1.1.1.193, 3.5.4.26 - H ko:K11752 ko00740,ko01100,ko01110,ko02024,map00740,map01100,map01110,map02024 ko00000,ko00001,ko00002,ko01000 Cytidine and deoxycytidylate deaminase zinc-binding region
PCJBFFDM_00459 3.39e-98 - - - S - - - Protein conserved in bacteria
PCJBFFDM_00460 0.0 - - - S - - - Amidohydrolase family
PCJBFFDM_00461 0.0 - 2.5.1.49 - H ko:K01740 ko00270,ko01100,map00270,map01100 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score 9.98
PCJBFFDM_00462 0.0 xylA 5.3.1.5 - G ko:K01805 ko00040,ko00051,ko01100,map00040,map00051,map01100 ko00000,ko00001,ko01000 Belongs to the xylose isomerase family
PCJBFFDM_00463 0.0 - 3.2.1.37, 3.2.1.55 GH43,GH51 G ko:K01198,ko:K01209 ko00520,ko01100,map00520,map01100 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 43 family
PCJBFFDM_00464 5.88e-233 - - - K ko:K02529,ko:K17640 - ko00000,ko03000 Bacterial regulatory proteins, lacI family
PCJBFFDM_00465 1e-308 - - - G ko:K02027,ko:K10117 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter periplasmic binding protein YcjN precursor K02027
PCJBFFDM_00466 8.4e-237 - - - U ko:K02025,ko:K10118 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
PCJBFFDM_00467 4.06e-212 - - - P ko:K02026,ko:K10119,ko:K17243 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
PCJBFFDM_00468 0.0 - 3.2.1.37 GH43 G ko:K01198 ko00520,ko01100,map00520,map01100 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 43 family
PCJBFFDM_00469 0.0 - 3.1.1.53 - G ko:K05970 - ko00000,ko01000 Glycosyl hydrolase family 2, sugar binding domain protein
PCJBFFDM_00470 7.2e-13 - - CE10 I ko:K03929 - ko00000,ko01000 Belongs to the type-B carboxylesterase lipase family
PCJBFFDM_00471 5.75e-143 maa 2.3.1.18, 2.3.1.79 - S ko:K00633,ko:K00661 - ko00000,ko01000 Bacterial transferase hexapeptide repeat protein
PCJBFFDM_00472 0.0 xylB 2.7.1.17 - G ko:K00854 ko00040,ko01100,map00040,map01100 ko00000,ko00001,ko00002,ko01000 FGGY family of carbohydrate kinases, C-terminal domain
PCJBFFDM_00473 1.21e-285 xylR - - GK - - - ROK family
PCJBFFDM_00475 2.63e-48 rpmE - - J ko:K02909 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds the 23S rRNA
PCJBFFDM_00476 4.95e-248 prfA - - J ko:K02835 - ko00000,ko03012 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
PCJBFFDM_00477 3.12e-221 prmC 2.1.1.297 - J ko:K02493 - ko00000,ko01000,ko03012 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
PCJBFFDM_00478 1.94e-278 - - - E ko:K01999 ko02010,ko02024,map02010,map02024 ko00000,ko00001,ko00002,ko02000 Receptor family ligand binding region
PCJBFFDM_00479 8.89e-199 - - - U ko:K01997 ko02010,ko02024,map02010,map02024 ko00000,ko00001,ko00002,ko02000 Belongs to the binding-protein-dependent transport system permease family
PCJBFFDM_00480 1.53e-249 - - - U ko:K01998 ko02010,ko02024,map02010,map02024 ko00000,ko00001,ko00002,ko02000 Belongs to the binding-protein-dependent transport system permease family
PCJBFFDM_00481 1.19e-192 livG - - E ko:K01995 ko02010,ko02024,map02010,map02024 ko00000,ko00001,ko00002,ko02000 Branched-chain amino acid ATP-binding cassette transporter
PCJBFFDM_00482 8.3e-160 livF - - E ko:K01995,ko:K01996 ko02010,ko02024,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ATPases associated with a variety of cellular activities
PCJBFFDM_00483 2.44e-147 ywlC 2.7.7.87 - J ko:K07566 - ko00000,ko01000,ko03009,ko03016 Belongs to the SUA5 family
PCJBFFDM_00484 1.27e-253 rfe 2.7.8.33, 2.7.8.35 - M ko:K02851 - ko00000,ko01000,ko01003,ko01005 Glycosyl transferase family 4
PCJBFFDM_00485 0.0 guaB 1.1.1.205 - F ko:K00088 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko04147 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth
PCJBFFDM_00486 2.61e-154 orn - - L ko:K13288 ko03008,map03008 ko00000,ko00001,ko01000,ko03009,ko03019 3'-to-5' exoribonuclease specific for small oligoribonucleotides
PCJBFFDM_00487 2.51e-208 - - - S - - - Sucrose-6F-phosphate phosphohydrolase
PCJBFFDM_00488 0.0 - - - L - - - PIF1-like helicase
PCJBFFDM_00489 0.0 proS 6.1.1.15 - J ko:K01881 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
PCJBFFDM_00490 5.12e-128 ssb2 - - L ko:K03111 ko03030,ko03430,ko03440,map03030,map03430,map03440 ko00000,ko00001,ko03029,ko03032,ko03400 Single-strand binding protein family
PCJBFFDM_00491 0.0 pepO 3.4.24.11, 3.4.24.71 - O ko:K01389,ko:K01415,ko:K07386 ko04614,ko04640,ko04974,ko05010,map04614,map04640,map04974,map05010 ko00000,ko00001,ko01000,ko01002,ko04090,ko04147 Peptidase family M13
PCJBFFDM_00492 5.71e-193 map 3.4.11.18 - E ko:K01265 - ko00000,ko01000,ko01002 Methionine aminopeptidase
PCJBFFDM_00493 9.67e-317 gltA 2.3.3.1 - C ko:K01647 ko00020,ko00630,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map01100,map01110,map01120,map01130,map01200,map01210,map01230 br01601,ko00000,ko00001,ko00002,ko01000 Citrate synthase, C-terminal domain
PCJBFFDM_00494 9.11e-216 dapD 2.3.1.117 - E ko:K00674 ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2- amino-6-oxopimelate using succinyl-CoA
PCJBFFDM_00495 2.04e-105 rlmH 2.1.1.177 - J ko:K00783 - ko00000,ko01000,ko03009 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
PCJBFFDM_00496 1.2e-262 prfB - - J ko:K02836 - ko00000,ko03012 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
PCJBFFDM_00497 3.54e-240 ftsE - - D ko:K09812 ko02010,map02010 ko00000,ko00001,ko00002,ko02000,ko03036 Cell division ATP-binding protein FtsE
PCJBFFDM_00498 7.75e-206 ftsX - - D ko:K09811 ko02010,map02010 ko00000,ko00001,ko00002,ko02000,ko03036 Part of the ABC transporter FtsEX involved in cellular division
PCJBFFDM_00499 4.33e-227 - - - D ko:K21471 - ko00000,ko01000,ko01002,ko01011 CHAP domain protein
PCJBFFDM_00500 5e-106 smpB - - J ko:K03664 - ko00000 the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
PCJBFFDM_00501 1.44e-205 glnH - - ET ko:K02030 - ko00000,ko00002,ko02000 ABC transporter, substrate-binding protein, family 3
PCJBFFDM_00502 2.26e-53 glnH - - ET ko:K02030 - ko00000,ko00002,ko02000 ABC transporter, substrate-binding protein, family 3
PCJBFFDM_00503 5.84e-205 glnH - - ET ko:K02030 - ko00000,ko00002,ko02000 ABC transporter, substrate-binding protein, family 3
PCJBFFDM_00504 3.7e-214 yecS - - E ko:K02029 - ko00000,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
PCJBFFDM_00505 5.24e-187 tcyC 3.6.3.21 - E ko:K02028,ko:K02029 - ko00000,ko00002,ko01000,ko02000 ATPases associated with a variety of cellular activities
PCJBFFDM_00506 0.0 glmS 2.6.1.16 - M ko:K00820 ko00250,ko00520,ko01100,ko01130,ko04931,map00250,map00520,map01100,map01130,map04931 ko00000,ko00001,ko01000,ko01002 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
PCJBFFDM_00507 7.21e-187 - 5.4.99.28, 5.4.99.29 - J ko:K06177 - ko00000,ko01000,ko03009,ko03016 RNA pseudouridylate synthase
PCJBFFDM_00508 1.19e-59 sstT - - E ko:K07862 - ko00000,ko02000 Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
PCJBFFDM_00509 2.47e-207 sstT - - E ko:K07862 - ko00000,ko02000 Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
PCJBFFDM_00510 5.33e-243 - - - K - - - Periplasmic binding protein domain
PCJBFFDM_00511 2.86e-216 - - - G ko:K02025 - ko00000,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
PCJBFFDM_00512 1.02e-232 - - - G ko:K02026 - ko00000,ko00002,ko02000 ABC transporter permease
PCJBFFDM_00513 0.0 bga1 3.2.1.23 - G ko:K12308 ko00052,map00052 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score 8.87
PCJBFFDM_00514 0.0 abfA1 3.2.1.55 GH51 G ko:K01209 ko00520,map00520 ko00000,ko00001,ko01000 arabinose metabolic process
PCJBFFDM_00515 0.0 - - - G ko:K02027 - ko00000,ko00002,ko02000 Bacterial extracellular solute-binding protein
PCJBFFDM_00516 0.0 - - - G ko:K02027 - ko00000,ko00002,ko02000 Bacterial extracellular solute-binding protein
PCJBFFDM_00517 8.78e-157 - - - K - - - Transcriptional regulatory protein, C terminal
PCJBFFDM_00518 2.42e-183 - - - T - - - His Kinase A (phosphoacceptor) domain
PCJBFFDM_00519 3.81e-107 - - - S - - - SnoaL-like domain
PCJBFFDM_00520 1.29e-183 coaX 2.7.1.33 - H ko:K03525 ko00770,ko01100,map00770,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
PCJBFFDM_00521 1.48e-302 coaBC 4.1.1.36, 6.3.2.5 - H ko:K13038 ko00770,ko01100,map00770,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
PCJBFFDM_00522 0.0 - - - E ko:K02035 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter, substrate-binding protein, family 5
PCJBFFDM_00523 2.12e-208 - - - P ko:K02033 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
PCJBFFDM_00524 1.22e-197 - - - EP ko:K02034 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
PCJBFFDM_00525 2.18e-173 - - - EP ko:K02031 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 oligopeptide transport protein of the ABC superfamily, ATP-binding component
PCJBFFDM_00526 1.71e-176 - - - E ko:K02032 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 ATPases associated with a variety of cellular activities
PCJBFFDM_00527 1.19e-235 cbs 2.5.1.47, 4.2.1.22 - E ko:K01697,ko:K01738 ko00260,ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00260,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Pyridoxal-phosphate dependent enzyme
PCJBFFDM_00528 1.63e-280 metB 2.5.1.48 - E ko:K01739 ko00270,ko00450,ko00920,ko01100,ko01110,ko01130,ko01230,map00270,map00450,map00920,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Cys/Met metabolism PLP-dependent enzyme
PCJBFFDM_00529 0.0 - - - V ko:K02003,ko:K02004 - ko00000,ko00002,ko02000 ATPases associated with a variety of cellular activities
PCJBFFDM_00530 0.0 recQ 3.6.4.12 - L ko:K03654 ko03018,map03018 ko00000,ko00001,ko01000,ko03400 ATP-dependent DNA helicase RecQ
PCJBFFDM_00531 1.29e-117 luxS 4.4.1.21 - H ko:K07173 ko00270,ko01100,ko01230,ko02024,ko02026,ko05111,map00270,map01100,map01230,map02024,map02026,map05111 ko00000,ko00001,ko00002,ko01000 Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
PCJBFFDM_00532 1.94e-132 cysE - - J - - - COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
PCJBFFDM_00533 0.0 aap1 - - E ko:K03294 - ko00000 aromatic amino acid transport protein AroP K03293
PCJBFFDM_00534 0.0 alr 5.1.1.1 - M ko:K01775 ko00473,ko01100,ko01502,map00473,map01100,map01502 ko00000,ko00001,ko01000,ko01011 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
PCJBFFDM_00535 0.0 dnaG - - L ko:K02316 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
PCJBFFDM_00536 3.15e-276 - - - P - - - Citrate transporter
PCJBFFDM_00538 0.0 tetM - - J ko:K18220 - br01600,ko00000,ko01504 Elongation factor G, domain IV
PCJBFFDM_00542 9.5e-142 - - - S - - - Acetyltransferase (GNAT) family
PCJBFFDM_00543 4.1e-143 glnP2 - - E ko:K02029 - ko00000,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
PCJBFFDM_00544 2.49e-156 glnP - - E ko:K02029,ko:K10040 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
PCJBFFDM_00545 4.13e-191 glnQ 3.6.3.21 - E ko:K02028 - ko00000,ko00002,ko01000,ko02000 ATP binding protein of ABC transporter for glutamate aspartate K02028
PCJBFFDM_00546 4.29e-200 glnH - - ET ko:K02030,ko:K10039 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Bacterial periplasmic substrate-binding proteins
PCJBFFDM_00547 0.0 - 3.2.1.22 - G ko:K07407 ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score 8.87
PCJBFFDM_00548 1.31e-242 - - - K ko:K02529 - ko00000,ko03000 Periplasmic binding protein domain
PCJBFFDM_00549 4.72e-303 - - - G ko:K02027 - ko00000,ko00002,ko02000 Bacterial extracellular solute-binding protein
PCJBFFDM_00550 8.47e-191 - - - U ko:K02025,ko:K10189,ko:K10241 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
PCJBFFDM_00551 1.25e-203 - - - P ko:K02026 - ko00000,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
PCJBFFDM_00552 0.0 - 3.2.1.185 GH127 S ko:K09955,ko:K18205 - ko00000,ko01000 Beta-L-arabinofuranosidase, GH127
PCJBFFDM_00553 0.0 - - - JM - - - Carbohydrate binding module (family 6)
PCJBFFDM_00554 1.51e-314 - - - G - - - Transporter major facilitator family protein
PCJBFFDM_00555 4.81e-253 - 1.1.1.169 - H ko:K00077 ko00770,ko01100,ko01110,map00770,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
PCJBFFDM_00556 1.56e-197 metQ - - M ko:K02073 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 NLPA lipoprotein
PCJBFFDM_00557 7.55e-243 metN - - P ko:K02071 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
PCJBFFDM_00558 2.4e-134 - - - P ko:K02072 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Psort location CytoplasmicMembrane, score 9.99
PCJBFFDM_00559 1.06e-280 - 2.6.1.1, 2.6.1.2, 2.6.1.66, 2.6.1.83 - E ko:K00812,ko:K08969,ko:K10206,ko:K14260,ko:K14261 ko00220,ko00250,ko00270,ko00290,ko00300,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00290,map00300,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Aminotransferase class I and II
PCJBFFDM_00560 6.44e-91 metC1 4.4.1.8 - E ko:K01760 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Cys/Met metabolism PLP-dependent enzyme
PCJBFFDM_00561 5.35e-20 - - - P - - - Belongs to the ABC transporter superfamily
PCJBFFDM_00562 2.83e-57 - - - O - - - Glutaredoxin
PCJBFFDM_00563 1.55e-177 hflK - - O - - - prohibitin homologues
PCJBFFDM_00564 1.36e-169 - - - V ko:K02003,ko:K02004 - ko00000,ko00002,ko02000 ATPases associated with a variety of cellular activities
PCJBFFDM_00565 6.25e-220 - - - M - - - Conserved repeat domain
PCJBFFDM_00566 0.0 - - - V ko:K02004 - ko00000,ko00002,ko02000 MacB-like periplasmic core domain
PCJBFFDM_00567 0.0 dxs 2.2.1.7 - H ko:K01662 ko00730,ko00900,ko01100,ko01110,ko01130,map00730,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
PCJBFFDM_00568 3.84e-233 yogA - - C - - - Zinc-binding dehydrogenase
PCJBFFDM_00569 2.09e-110 purE 5.4.99.18 - F ko:K01588 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
PCJBFFDM_00570 1.93e-286 purK 6.3.4.18 - F ko:K01589 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
PCJBFFDM_00571 7.41e-117 fur - - P ko:K03711 - ko00000,ko03000 Belongs to the Fur family
PCJBFFDM_00572 0.0 - - - M - - - Psort location CytoplasmicMembrane, score 9.26
PCJBFFDM_00573 7.75e-258 - 2.7.1.83 - G ko:K16328 ko00240,map00240 ko00000,ko00001,ko01000 pfkB family carbohydrate kinase
PCJBFFDM_00574 4.55e-242 yeiI 2.7.1.15, 2.7.1.45, 2.7.1.83 - G ko:K00852,ko:K00874,ko:K16328 ko00030,ko00240,ko01100,ko01120,ko01200,map00030,map00240,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 pfkB family carbohydrate kinase
PCJBFFDM_00575 1.06e-165 trpF 5.3.1.24 - E ko:K01817 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 N-(5'phosphoribosyl)anthranilate (PRA) isomerase
PCJBFFDM_00576 1.05e-273 - - - C ko:K19954 - ko00000,ko01000 Iron-containing alcohol dehydrogenase
PCJBFFDM_00577 8.1e-236 rihB 3.2.2.1, 3.2.2.8 - F ko:K01239,ko:K01250,ko:K10213 ko00230,ko00240,ko00760,ko01100,map00230,map00240,map00760,map01100 ko00000,ko00001,ko01000 Inosine-uridine preferring nucleoside hydrolase
PCJBFFDM_00578 7.78e-314 - - - EGP - - - Major Facilitator Superfamily
PCJBFFDM_00579 8.42e-299 purD 6.3.3.1, 6.3.4.13 - F ko:K01945,ko:K11788 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Belongs to the GARS family
PCJBFFDM_00580 1.07e-242 purM 6.3.3.1 - F ko:K01933 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Phosphoribosylformylglycinamidine cyclo-ligase
PCJBFFDM_00581 0.0 purF 2.4.2.14 - F ko:K00764 ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000,ko01002 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
PCJBFFDM_00582 0.0 - - - L ko:K03502 - ko00000,ko03400 DNA-damage repair protein (DNA polymerase IV) K00961
PCJBFFDM_00583 1.79e-46 - - - - - - - -
PCJBFFDM_00584 0.0 purL 6.3.5.3 - F ko:K01952 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 CobB/CobQ-like glutamine amidotransferase domain
PCJBFFDM_00585 2.68e-173 purC 6.3.2.6 - F ko:K01923 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Belongs to the SAICAR synthetase family
PCJBFFDM_00586 3.1e-272 purT 2.1.2.2 - F ko:K08289 ko00230,ko00670,ko01100,ko01110,ko01130,map00230,map00670,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
PCJBFFDM_00587 1.46e-284 - - - M - - - Glycosyl transferase 4-like domain
PCJBFFDM_00588 9.25e-247 ltaE 4.1.2.48 - E ko:K01620 ko00260,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko01000 Beta-eliminating lyase
PCJBFFDM_00590 5.25e-241 - - - S ko:K03453 - ko00000 SBF-like CPA transporter family (DUF4137)
PCJBFFDM_00591 5.77e-81 rpsL - - J ko:K02950 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
PCJBFFDM_00592 9.4e-105 rpsG - - J ko:K02992 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
PCJBFFDM_00593 0.0 fusA - - J ko:K02355 - ko00000,ko03012,ko03029 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
PCJBFFDM_00594 2.12e-295 tuf - - J ko:K02358 - ko00000,ko03012,ko03029,ko04147 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
PCJBFFDM_00595 2.2e-134 efp - - J ko:K02356 - ko00000,ko03012 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
PCJBFFDM_00596 7.03e-98 nusB - - K ko:K03625 - ko00000,ko03009,ko03021 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
PCJBFFDM_00597 4.13e-296 carA 6.3.5.5 - F ko:K01956 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the CarA family
PCJBFFDM_00598 0.0 carB 6.3.5.5 - EF ko:K01955 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Carbamoyl-phosphate synthetase large chain, oligomerisation domain
PCJBFFDM_00599 1.42e-218 pyrF 4.1.1.23 - F ko:K01591 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Essential for recycling GMP and indirectly, cGMP
PCJBFFDM_00600 3.1e-138 gmk 2.7.4.8 - F ko:K00942 ko00230,ko01100,map00230,map01100 ko00000,ko00001,ko00002,ko01000 Essential for recycling GMP and indirectly, cGMP
PCJBFFDM_00602 0.0 ilvD 4.2.1.9 - H ko:K01687 ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00770,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the IlvD Edd family
PCJBFFDM_00603 5.45e-61 rpoZ 2.7.7.6 - K ko:K03060 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
PCJBFFDM_00604 7.42e-291 metK 2.5.1.6 - H ko:K00789 ko00270,ko01100,ko01110,ko01230,map00270,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
PCJBFFDM_00605 0.0 priA - - L ko:K04066 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
PCJBFFDM_00606 1.23e-172 - 3.8.1.2 - S ko:K01560,ko:K07025 ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120 ko00000,ko00001,ko01000 Haloacid dehalogenase-like hydrolase
PCJBFFDM_00607 1.01e-228 fmt 2.1.2.9 - J ko:K00604 ko00670,ko00970,map00670,map00970 ko00000,ko00001,ko01000 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
PCJBFFDM_00608 4.49e-159 serB 3.1.3.3 - E ko:K01079 ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko01009 haloacid dehalogenase-like hydrolase
PCJBFFDM_00609 0.0 arc - - O ko:K13527 ko03050,map03050 ko00000,ko00001,ko00002,ko03051 AAA ATPase forming ring-shaped complexes
PCJBFFDM_00610 0.0 dop 3.5.1.119 - S ko:K20814 - ko00000,ko01000,ko03051 Pup-ligase protein
PCJBFFDM_00611 8.18e-206 - 3.1.3.25 - G ko:K01092 ko00521,ko00562,ko01100,ko04070,map00521,map00562,map01100,map04070 ko00000,ko00001,ko00002,ko01000 Inositol monophosphatase family
PCJBFFDM_00612 5.14e-34 pup - - S ko:K13570 - ko00000,ko04121 Protein modifier that is covalently attached to lysine residues of substrate proteins, thereby targeting them for proteasomal degradation. The tagging system is termed pupylation
PCJBFFDM_00613 0.0 pafA 6.3.1.19 - O ko:K13571 - ko00000,ko00002,ko01000,ko03051 Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine
PCJBFFDM_00614 7.66e-181 - - - C - - - FMN binding
PCJBFFDM_00615 4.52e-77 - - - - - - - -
PCJBFFDM_00616 4.7e-57 hup - - L ko:K03530 - ko00000,ko03032,ko03036,ko03400 Belongs to the bacterial histone-like protein family
PCJBFFDM_00617 0.0 - - - S - - - Lysylphosphatidylglycerol synthase TM region
PCJBFFDM_00618 0.0 purB 4.3.2.2 - F ko:K01756 ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Adenylosuccinate lyase C-terminal
PCJBFFDM_00619 0.0 - - - S - - - PGAP1-like protein
PCJBFFDM_00620 7.03e-104 - - - - - - - -
PCJBFFDM_00621 7.17e-234 - - - S ko:K07114 - ko00000,ko02000 von Willebrand factor (vWF) type A domain
PCJBFFDM_00622 4.19e-241 - - - S ko:K07114 - ko00000,ko02000 von Willebrand factor (vWF) type A domain
PCJBFFDM_00623 3.29e-121 - - - - - - - -
PCJBFFDM_00624 3.01e-224 - - - S - - - Protein of unknown function DUF58
PCJBFFDM_00625 1.31e-233 moxR - - S ko:K03924 - ko00000,ko01000 ATPase family associated with various cellular activities (AAA)
PCJBFFDM_00626 9.46e-176 ung 3.2.2.27 - L ko:K03648 ko03410,ko05340,map03410,map05340 ko00000,ko00001,ko01000,ko03400 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
PCJBFFDM_00627 1.99e-116 - - - S - - - LytR cell envelope-related transcriptional attenuator
PCJBFFDM_00628 0.0 groL - - O ko:K04077 ko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152 ko00000,ko00001,ko03019,ko03029,ko03110,ko04147 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
PCJBFFDM_00629 1.74e-38 - - - S - - - Proteins of 100 residues with WXG
PCJBFFDM_00630 5.06e-168 - - - - - - - -
PCJBFFDM_00631 2.04e-169 phoP - - KT ko:K02483 - ko00000,ko02022 Response regulator receiver domain protein
PCJBFFDM_00632 0.0 phoR 2.7.13.3 - T ko:K02484 - ko00000,ko01000,ko01001,ko02022 ATPase histidine kinase DNA gyrase B HSP90 domain protein
PCJBFFDM_00633 6.1e-88 cspB - - K ko:K03704 - ko00000,ko03000 'Cold-shock' DNA-binding domain
PCJBFFDM_00634 4.98e-243 - - - S - - - Protein of unknown function (DUF3027)
PCJBFFDM_00635 1.36e-242 uspA - - T - - - Belongs to the universal stress protein A family
PCJBFFDM_00636 0.0 clpC - - O ko:K03696 ko01100,map01100 ko00000,ko03110 ATPase family associated with various cellular activities (AAA)
PCJBFFDM_00637 0.0 codA 3.5.4.1, 3.5.4.21 - F ko:K01485,ko:K03365 ko00240,ko00330,ko01100,map00240,map00330,map01100 ko00000,ko00001,ko01000 Amidohydrolase family
PCJBFFDM_00638 0.0 - - - QT - - - Purine catabolism regulatory protein-like family
PCJBFFDM_00639 7.96e-316 proP - - EGP ko:K03762 - ko00000,ko02000 Sugar (and other) transporter
PCJBFFDM_00640 5.73e-179 - 3.5.2.10 - S ko:K01470 ko00330,map00330 ko00000,ko00001,ko01000 Creatinine amidohydrolase
PCJBFFDM_00641 1.25e-299 - - - S - - - Domain of Unknown Function (DUF349)
PCJBFFDM_00642 0.0 hisS 6.1.1.21 - J ko:K01892 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Histidyl-tRNA synthetase
PCJBFFDM_00643 0.0 aspS 6.1.1.12 - J ko:K01876 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
PCJBFFDM_00644 0.0 glnP - - E ko:K02029,ko:K02030 - ko00000,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
PCJBFFDM_00645 1.01e-179 glnQ 3.6.3.21 - E ko:K02028 - ko00000,ko00002,ko01000,ko02000 ATPases associated with a variety of cellular activities
PCJBFFDM_00646 7.87e-186 gluA - - E ko:K10008 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ATP-binding protein of ABC transporter for glutamate K02028
PCJBFFDM_00647 1.78e-196 gluB - - ET ko:K10005 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Belongs to the bacterial solute-binding protein 3 family
PCJBFFDM_00648 1.04e-144 gluC - - E ko:K10006 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
PCJBFFDM_00649 4.31e-258 gluD - - E ko:K10007 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
PCJBFFDM_00650 2.85e-243 - - - S - - - Polyphosphate kinase 2 (PPK2)
PCJBFFDM_00651 0.0 - - - L - - - DEAD DEAH box helicase
PCJBFFDM_00652 0.0 rarA - - L ko:K07478 - ko00000 Recombination factor protein RarA
PCJBFFDM_00653 4.83e-173 mtrA - - KT ko:K07670 ko02020,map02020 ko00000,ko00001,ko00002,ko02022 Transcriptional regulatory protein, C terminal
PCJBFFDM_00654 0.0 mtrB 2.7.13.3 - T ko:K07636,ko:K07654 ko02020,map02020 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PCJBFFDM_00655 0.0 lpqB - - S - - - Lipoprotein LpqB beta-propeller domain
PCJBFFDM_00656 4.37e-219 - - - G ko:K02058,ko:K10439 ko02010,ko02030,map02010,map02030 ko00000,ko00001,ko00002,ko02000 Periplasmic binding protein domain
PCJBFFDM_00657 0.0 - 3.6.3.17 - G ko:K02056,ko:K10441 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ATPases associated with a variety of cellular activities
PCJBFFDM_00658 2.87e-231 ytfT - - U ko:K02057,ko:K10440 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Branched-chain amino acid transport system / permease component
PCJBFFDM_00659 1.77e-219 - - - U ko:K02057,ko:K10440,ko:K17209 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Branched-chain amino acid transport system / permease component
PCJBFFDM_00660 0.0 - - - EGP - - - Major Facilitator Superfamily
PCJBFFDM_00661 0.0 dppA - - E ko:K02035,ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter, substrate-binding protein, family 5
PCJBFFDM_00662 1.25e-147 clpP1 3.4.21.92 - O ko:K01358 ko04112,ko04212,map04112,map04212 ko00000,ko00001,ko01000,ko01002 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
PCJBFFDM_00663 9.35e-161 clpP 3.4.21.92 - O ko:K01358 ko04112,ko04212,map04112,map04212 ko00000,ko00001,ko01000,ko01002 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
PCJBFFDM_00664 5.76e-308 clpX - - O ko:K03544 ko04112,map04112 ko00000,ko00001,ko03110 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
PCJBFFDM_00667 2.92e-315 nhaA - - P ko:K03313 - ko00000,ko02000 Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
PCJBFFDM_00668 1.23e-151 safC - - S - - - O-methyltransferase
PCJBFFDM_00669 1.96e-225 sdhB 1.3.5.1, 1.3.5.4 - C ko:K00240 ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 4Fe-4S dicluster domain
PCJBFFDM_00670 0.0 sdhA 1.3.5.1, 1.3.5.4, 1.4.3.16 - C ko:K00239,ko:K00278 ko00020,ko00190,ko00250,ko00650,ko00720,ko00760,ko01100,ko01110,ko01120,ko01130,ko01200,ko05134,map00020,map00190,map00250,map00650,map00720,map00760,map01100,map01110,map01120,map01130,map01200,map05134 ko00000,ko00001,ko00002,ko01000 Succinate dehydrogenase flavoprotein subunit
PCJBFFDM_00671 0.0 dprA - - LU ko:K04096 - ko00000 DNA recombination-mediator protein A
PCJBFFDM_00672 0.0 comM - - O ko:K07391 - ko00000 Magnesium chelatase, subunit ChlI C-terminal
PCJBFFDM_00673 1.85e-108 yraN - - L ko:K07460 - ko00000 Belongs to the UPF0102 family
PCJBFFDM_00674 1.06e-211 pdxY 2.7.1.35 - H ko:K00868 ko00750,ko01100,map00750,map01100 ko00000,ko00001,ko01000 Phosphomethylpyrimidine kinase
PCJBFFDM_00675 0.0 - 2.5.1.49 - E ko:K01740 ko00270,ko01100,map00270,map01100 ko00000,ko00001,ko01000 Aminotransferase class-V
PCJBFFDM_00676 1.88e-124 - - - S - - - ECF-type riboflavin transporter, S component
PCJBFFDM_00677 0.0 ykoD - - P ko:K16784,ko:K16786,ko:K16787 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 AAA domain, putative AbiEii toxin, Type IV TA system
PCJBFFDM_00678 1.1e-192 cbiQ - - P ko:K16785 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Cobalt transport protein
PCJBFFDM_00679 2.42e-245 asnC - - K ko:K03718 - ko00000,ko03000 helix_turn_helix ASNC type
PCJBFFDM_00680 1.28e-182 - - - V ko:K02003 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
PCJBFFDM_00681 0.0 - - - MV ko:K02004 - ko00000,ko00002,ko02000 MacB-like periplasmic core domain
PCJBFFDM_00682 5.8e-167 - - - K - - - helix_turn_helix, Lux Regulon
PCJBFFDM_00683 0.0 - - - T - - - Histidine kinase
PCJBFFDM_00684 0.0 pip 3.4.11.5 - S ko:K01259 ko00330,map00330 ko00000,ko00001,ko01000,ko01002 alpha/beta hydrolase fold
PCJBFFDM_00685 5.78e-176 proC 1.5.1.2 - E ko:K00286 ko00330,ko01100,ko01110,ko01130,ko01230,map00330,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
PCJBFFDM_00686 3.03e-257 ychF - - J ko:K06942 - ko00000,ko03009 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
PCJBFFDM_00687 6.19e-24 yccF - - S - - - Inner membrane component domain
PCJBFFDM_00688 2.7e-17 - - - - - - - -
PCJBFFDM_00689 0.0 - - - U - - - Drug resistance MFS transporter, drug H antiporter-2 family
PCJBFFDM_00690 1.71e-36 - - - - - - - -
PCJBFFDM_00691 1.7e-127 - - - - - - - -
PCJBFFDM_00692 5.28e-208 - - - S - - - Conserved hypothetical protein 698
PCJBFFDM_00693 1.03e-235 nhaC - - C ko:K03315 - ko00000,ko02000 Na H antiporter family protein
PCJBFFDM_00694 2.89e-200 - - - C ko:K07138 - ko00000 Domain of unknown function (DUF362)
PCJBFFDM_00695 5.87e-104 - - - F - - - uridine kinase
PCJBFFDM_00696 1.26e-103 - - - S - - - ECF transporter, substrate-specific component
PCJBFFDM_00697 4.58e-184 - - - S ko:K07090 - ko00000 Sulfite exporter TauE/SafE
PCJBFFDM_00698 3.4e-175 - - - K - - - helix_turn_helix, arabinose operon control protein
PCJBFFDM_00699 3.19e-200 - - - G - - - Phosphoglycerate mutase family
PCJBFFDM_00700 1.67e-289 rutG - - F ko:K02824,ko:K03458 - ko00000,ko02000 Permease family
PCJBFFDM_00701 3.13e-163 - - - S - - - Enoyl-(Acyl carrier protein) reductase
PCJBFFDM_00702 0.0 - - - JKL - - - helicase superfamily c-terminal domain
PCJBFFDM_00703 3.34e-173 - - - V ko:K02069 - ko00000,ko00002,ko02000 Uncharacterised protein family (UPF0014)
PCJBFFDM_00704 7.02e-183 - - - V ko:K02068 - ko00000,ko00002,ko02000 ATPases associated with a variety of cellular activities
PCJBFFDM_00705 6.77e-306 - - - S - - - Putative esterase
PCJBFFDM_00706 0.0 lysX - - S - - - Uncharacterised conserved protein (DUF2156)
PCJBFFDM_00707 0.0 gnd 1.1.1.343, 1.1.1.44 - H ko:K00033 ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
PCJBFFDM_00708 3.41e-188 - - - S ko:K07124 - ko00000 Belongs to the short-chain dehydrogenases reductases (SDR) family
PCJBFFDM_00709 1.5e-301 - 4.4.1.8 - E ko:K14155 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 ko00000,ko00001,ko01000,ko01007 Aminotransferase, class I II
PCJBFFDM_00710 0.0 zwf 1.1.1.363, 1.1.1.49 - G ko:K00036 ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,ko05230,map00030,map00480,map01100,map01110,map01120,map01130,map01200,map05230 ko00000,ko00001,ko00002,ko01000,ko04147 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
PCJBFFDM_00711 5.43e-233 opcA - - G - - - Glucose-6-phosphate dehydrogenase subunit
PCJBFFDM_00712 5.83e-187 pgl 3.1.1.31 - G ko:K01057 ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
PCJBFFDM_00713 2.81e-106 dtd - - J ko:K07560 - ko00000,ko01000,ko03016 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
PCJBFFDM_00714 6.06e-135 - - - M - - - Protein of unknown function (DUF3737)
PCJBFFDM_00715 2.1e-175 - - - E - - - AzlC protein
PCJBFFDM_00716 1.96e-71 azlD - - E - - - Branched-chain amino acid transport protein (AzlD)
PCJBFFDM_00717 0.0 cstA - - T ko:K06200 - ko00000 5TM C-terminal transporter carbon starvation CstA
PCJBFFDM_00718 1.2e-53 - - - S - - - Selenoprotein, putative
PCJBFFDM_00719 1.12e-229 - 3.2.1.52 - G ko:K01207 ko00520,ko00531,ko01100,ko01501,map00520,map00531,map01100,map01501 ko00000,ko00001,ko00002,ko01000 Glycosyl hydrolase family 3 N-terminal domain protein
PCJBFFDM_00720 0.0 - - - S ko:K09118 - ko00000 Uncharacterised protein family (UPF0182)
PCJBFFDM_00721 4.83e-129 - 2.3.1.183 - M ko:K03823 ko00440,ko01130,map00440,map01130 ko00000,ko00001,ko01000 Acetyltransferase (GNAT) domain
PCJBFFDM_00722 1.42e-145 pth 3.1.1.29 - J ko:K01056 - ko00000,ko01000,ko03012 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
PCJBFFDM_00723 0.0 mfd - - L ko:K03723 ko03420,map03420 ko00000,ko00001,ko01000,ko03400 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
PCJBFFDM_00724 7.13e-313 eno 4.2.1.11 - G ko:K01689 ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066 ko00000,ko00001,ko00002,ko01000,ko03019,ko04147 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
PCJBFFDM_00725 2.81e-96 - - - D - - - Septum formation initiator
PCJBFFDM_00726 2.3e-133 - - - S ko:K09009 - ko00000 Protein of unknown function (DUF501)
PCJBFFDM_00727 4.49e-233 ppx 3.6.1.11, 3.6.1.40 - FP ko:K01524 ko00230,map00230 ko00000,ko00001,ko01000 Ppx/GppA phosphatase family
PCJBFFDM_00729 1.58e-120 - - - - - - - -
PCJBFFDM_00730 0.0 sdaA 4.3.1.17 - E ko:K01752 ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230 ko00000,ko00001,ko01000 Serine dehydratase alpha chain
PCJBFFDM_00731 1.12e-95 fkbP 5.2.1.8 - G ko:K01802 - ko00000,ko01000 Peptidyl-prolyl cis-trans
PCJBFFDM_00732 2.04e-105 greA - - K ko:K03624 - ko00000,ko03021 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PCJBFFDM_00733 1.34e-200 hlyIII - - S ko:K11068 - ko00000,ko02042 Haemolysin-III related
PCJBFFDM_00734 0.0 pdtaS 2.7.13.3 - T ko:K00936 - ko00000,ko00002,ko01000,ko01001,ko02022 ATPase histidine kinase DNA gyrase B HSP90 domain protein
PCJBFFDM_00735 3.32e-61 whiB - - K ko:K18955 - ko00000,ko03000 Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA
PCJBFFDM_00736 0.0 - - - D ko:K03466 - ko00000,ko03036 FtsK/SpoIIIE family
PCJBFFDM_00737 1.94e-218 lytR2 - - K - - - Cell envelope-related transcriptional attenuator domain
PCJBFFDM_00739 5.03e-301 yvhJ - - K - - - Cell envelope-related transcriptional attenuator domain
PCJBFFDM_00740 5.69e-72 whiB2 - - K ko:K18955 - ko00000,ko03000 Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA
PCJBFFDM_00741 0.0 - - - S - - - Glycosyl transferase, family 2
PCJBFFDM_00742 2.18e-289 - - - - - - - -
PCJBFFDM_00743 6.14e-93 - - - S - - - Zincin-like metallopeptidase
PCJBFFDM_00744 1.22e-194 - - - T - - - Eukaryotic phosphomannomutase
PCJBFFDM_00745 1.14e-176 pyrE_1 - - S - - - Phosphoribosyl transferase domain
PCJBFFDM_00746 1.99e-238 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
PCJBFFDM_00747 1.74e-165 cseB - - T - - - Response regulator receiver domain protein
PCJBFFDM_00748 0.0 glgB 2.4.1.18 CBM48,GH13 G ko:K00700 ko00500,ko01100,ko01110,map00500,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko04147 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
PCJBFFDM_00749 8.46e-133 carD - - K ko:K07736 - ko00000,ko03000 CarD-like/TRCF domain
PCJBFFDM_00750 3.22e-114 ispF 2.7.7.60, 4.6.1.12 - H ko:K01770,ko:K12506 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP)
PCJBFFDM_00751 1.58e-179 znuB - - U ko:K02075 - ko00000,ko00002,ko02000 ABC 3 transport family
PCJBFFDM_00752 7.98e-205 - - - P ko:K02074 - ko00000,ko00002,ko02000 ATPases associated with a variety of cellular activities
PCJBFFDM_00753 2.2e-235 - - - P ko:K02077 - ko00000,ko00002,ko02000 Zinc-uptake complex component A periplasmic
PCJBFFDM_00754 9.54e-208 folD 1.5.1.5, 3.5.4.9 - F ko:K01491 ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
PCJBFFDM_00755 0.0 rpsA - - J ko:K02945 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal protein S1
PCJBFFDM_00756 1.09e-149 coaE 2.7.1.24 - H ko:K00859 ko00770,ko01100,map00770,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
PCJBFFDM_00757 0.0 uvrB - - L ko:K03702 ko03420,map03420 ko00000,ko00001,ko03400 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
PCJBFFDM_00759 2.25e-202 terC - - P ko:K05794 - ko00000 Integral membrane protein, TerC family
PCJBFFDM_00760 0.0 pyk 2.7.1.40 - G ko:K00873 ko00010,ko00230,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko04930,ko05165,ko05203,ko05230,map00010,map00230,map00620,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map04930,map05165,map05203,map05230 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Pyruvate kinase
PCJBFFDM_00762 5.06e-88 - 5.99.1.2 - L ko:K03169 - ko00000,ko01000,ko03032 DNA topoisomerase
PCJBFFDM_00763 2.55e-29 - - - - - - - -
PCJBFFDM_00766 8.53e-114 - - - KL - - - Type III restriction enzyme res subunit
PCJBFFDM_00767 3.82e-211 - 5.1.3.15 - G ko:K01792 ko00010,ko01100,ko01110,ko01120,ko01130,map00010,map01100,map01110,map01120,map01130 ko00000,ko00001,ko01000 Aldose 1-epimerase
PCJBFFDM_00768 1.01e-154 pdtaR - - T ko:K22010 - ko00000,ko00002,ko02022 Response regulator receiver domain protein
PCJBFFDM_00769 0.0 polA 2.7.7.7 - L ko:K02335 ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440 ko00000,ko00001,ko01000,ko03032,ko03400 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
PCJBFFDM_00770 1.74e-222 - - - L - - - NIF3 (NGG1p interacting factor 3)
PCJBFFDM_00771 4.34e-159 - - - L - - - NUDIX domain
PCJBFFDM_00772 0.0 glgX 3.2.1.68 CBM48,GH13 G ko:K01214 ko00500,ko01100,ko01110,map00500,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Belongs to the glycosyl hydrolase 13 family
PCJBFFDM_00773 1.18e-271 - - - - - - - -
PCJBFFDM_00775 3.16e-87 - - - L - - - Phage integrase family
PCJBFFDM_00776 5.93e-85 - - - L - - - Phage integrase family
PCJBFFDM_00777 3.34e-50 - - - - - - - -
PCJBFFDM_00778 3.91e-140 - - - K - - - Fic/DOC family
PCJBFFDM_00779 6.25e-136 - 2.7.7.7 - L ko:K02342 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 Exonuclease, DNA polymerase III, epsilon subunit family
PCJBFFDM_00781 1.03e-19 - - - K - - - Cro/C1-type HTH DNA-binding domain
PCJBFFDM_00784 1.63e-29 - - - - - - - -
PCJBFFDM_00787 3.55e-64 ssb - - L ko:K03111 ko03030,ko03430,ko03440,map03030,map03430,map03440 ko00000,ko00001,ko03029,ko03032,ko03400 Single-strand binding protein family
PCJBFFDM_00789 2.18e-10 - - - - - - - -
PCJBFFDM_00792 1.52e-33 - - - K - - - Transcriptional regulator
PCJBFFDM_00793 1.75e-33 - - - V - - - HNH endonuclease
PCJBFFDM_00796 1.29e-85 - - - - - - - -
PCJBFFDM_00797 6.63e-78 - - - - - - - -
PCJBFFDM_00798 9.3e-74 - - - - - - - -
PCJBFFDM_00801 3.54e-22 - - - V - - - HNH nucleases
PCJBFFDM_00803 1.07e-145 - - - S - - - phage terminase, large subunit
PCJBFFDM_00805 3.99e-101 - - - S - - - Phage portal protein, SPP1 Gp6-like
PCJBFFDM_00807 5.59e-137 - - - - - - - -
PCJBFFDM_00816 4.7e-35 - - - N - - - domain, Protein
PCJBFFDM_00819 2.23e-75 - - - S - - - Transglycosylase SLT domain
PCJBFFDM_00820 7.17e-44 - - - - - - - -
PCJBFFDM_00821 5.76e-16 - - - - - - - -
PCJBFFDM_00822 2.38e-161 - - - - - - - -
PCJBFFDM_00824 1.36e-48 - - - - - - - -
PCJBFFDM_00829 3.35e-54 - - - M - - - Glycosyl hydrolases family 25
PCJBFFDM_00831 0.0 aroA 2.5.1.19 - E ko:K00800 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
PCJBFFDM_00832 4.56e-93 - - - K - - - Acetyltransferase (GNAT) domain
PCJBFFDM_00833 1.33e-99 - - - K ko:K03826 - ko00000,ko01000 Acetyltransferase (GNAT) domain
PCJBFFDM_00834 0.0 guaA 6.3.5.2 - F ko:K01951 ko00230,ko00983,ko01100,map00230,map00983,map01100 ko00000,ko00001,ko00002,ko01000,ko01002 Catalyzes the synthesis of GMP from XMP
PCJBFFDM_00835 0.0 xfp 4.1.2.22, 4.1.2.9 - G ko:K01621 ko00030,ko00710,ko01100,ko01120,map00030,map00710,map01100,map01120 ko00000,ko00001,ko01000 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase
PCJBFFDM_00836 0.0 pta 2.3.1.8 - C ko:K13788 ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 phosphate acetyltransferase
PCJBFFDM_00837 8.03e-296 ackA 2.7.2.1 - H ko:K00925 ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PCJBFFDM_00838 0.0 yrhL - - I - - - Psort location CytoplasmicMembrane, score 9.99
PCJBFFDM_00839 6.08e-312 pbuX - - F ko:K03458 - ko00000 Permease family
PCJBFFDM_00840 2.66e-138 xpt 2.4.2.22 - F ko:K03816 ko00230,ko01100,ko01110,map00230,map01100,map01110 ko00000,ko00001,ko01000 Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
PCJBFFDM_00841 0.0 pcrA 3.6.4.12 - L ko:K03657 ko03420,ko03430,map03420,map03430 ko00000,ko00001,ko01000,ko03400 DNA helicase
PCJBFFDM_00842 3.23e-80 - - - S - - - Domain of unknown function (DUF4418)
PCJBFFDM_00843 8.69e-277 - - - V ko:K02004 - ko00000,ko00002,ko02000 FtsX-like permease family
PCJBFFDM_00844 6.35e-193 - - - V ko:K02003 - ko00000,ko00002,ko02000 ABC transporter
PCJBFFDM_00845 3.17e-142 rpsD - - J ko:K02986 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
PCJBFFDM_00846 1.97e-74 - - - S ko:K08972 - ko00000 Mycobacterial 4 TMS phage holin, superfamily IV
PCJBFFDM_00847 9.46e-167 - 5.4.2.12 - G ko:K15634 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Phosphoglycerate mutase family
PCJBFFDM_00848 8.09e-79 - - - S - - - Bacterial protein of unknown function (DUF948)
PCJBFFDM_00849 6.83e-50 - - - - - - - -
PCJBFFDM_00850 0.0 alaS 6.1.1.7 - J ko:K01872 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
PCJBFFDM_00851 1.06e-106 ruvX - - L ko:K07447 - ko00000,ko01000 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
PCJBFFDM_00852 2.36e-253 mltG - - S ko:K07082 - ko00000 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
PCJBFFDM_00853 3.69e-95 - 3.4.23.43 - S ko:K02654 - ko00000,ko00002,ko01000,ko01002,ko02035,ko02044 Type IV leader peptidase family
PCJBFFDM_00854 1.64e-282 aroC 4.2.3.5 - E ko:K01736 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
PCJBFFDM_00855 0.0 aroB 2.7.1.71, 4.2.3.4 - H ko:K01735,ko:K13829 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
PCJBFFDM_00856 3.9e-105 aroQ 4.2.1.10 - E ko:K03786 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes a trans-dehydration via an enolate intermediate
PCJBFFDM_00857 0.0 - 3.2.1.1, 3.2.1.41 CBM48,GH13 M ko:K01176,ko:K01200 ko00500,ko01100,ko01110,ko04973,map00500,map01100,map01110,map04973 ko00000,ko00001,ko01000 Aamy_C
PCJBFFDM_00858 0.0 pyrG 6.3.4.2 - F ko:K01937 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
PCJBFFDM_00859 0.0 - - - S - - - L,D-transpeptidase catalytic domain
PCJBFFDM_00860 0.0 sufB - - O ko:K09014 - ko00000 FeS assembly protein SufB
PCJBFFDM_00861 4.32e-299 sufD - - O ko:K09015 - ko00000 FeS assembly protein SufD
PCJBFFDM_00862 1.14e-183 sufC - - O ko:K09013 - ko00000,ko02000 FeS assembly ATPase SufC
PCJBFFDM_00863 2.64e-304 sufS 2.8.1.7, 4.4.1.16 - E ko:K11717 ko00450,ko01100,map00450,map01100 ko00000,ko00001,ko01000 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
PCJBFFDM_00864 2.58e-131 iscU - - C ko:K04488 - ko00000 SUF system FeS assembly protein, NifU family
PCJBFFDM_00865 3.77e-139 - - - S - - - Iron-sulfur cluster assembly protein
PCJBFFDM_00866 5.57e-310 glgC 2.7.7.27 - H ko:K00975 ko00500,ko00520,ko01100,ko01110,ko02026,map00500,map00520,map01100,map01110,map02026 ko00000,ko00001,ko00002,ko01000 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
PCJBFFDM_00867 5e-207 spoU2 - - J - - - SpoU rRNA Methylase family
PCJBFFDM_00869 9.78e-188 - 2.1.1.193 - J ko:K09761 - ko00000,ko01000,ko03009 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
PCJBFFDM_00870 1.81e-74 hit - - FG ko:K02503 - ko00000,ko04147 Scavenger mRNA decapping enzyme C-term binding
PCJBFFDM_00871 4.06e-267 phoH - - T ko:K06217 - ko00000 PhoH-like protein
PCJBFFDM_00872 1.14e-133 ybeY - - S ko:K07042 - ko00000,ko03009 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
PCJBFFDM_00873 0.0 corC - - S - - - CBS domain
PCJBFFDM_00874 2.58e-228 era - - S ko:K03595 - ko00000,ko03009,ko03029 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
PCJBFFDM_00875 0.0 fadD2 6.2.1.3 - I ko:K01897 ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920 ko00000,ko00001,ko00002,ko01000,ko01004,ko04147 AMP-binding enzyme
PCJBFFDM_00876 3.43e-260 pntA 1.6.1.2 - C ko:K00324 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko01000 NAD(P) transhydrogenase subunit alpha part 1 K00324
PCJBFFDM_00877 1.02e-57 pntAB 1.6.1.2 - C ko:K00324 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko01000 4TM region of pyridine nucleotide transhydrogenase, mitoch
PCJBFFDM_00878 0.0 pntB 1.6.1.2 - C ko:K00325 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko01000 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
PCJBFFDM_00879 0.0 - - - S - - - Psort location Cytoplasmic, score 8.87
PCJBFFDM_00881 1.17e-288 - - - G - - - Transmembrane secretion effector
PCJBFFDM_00882 4.33e-154 - - - K - - - Bacterial regulatory proteins, tetR family
PCJBFFDM_00884 3.96e-53 nrdH - - O ko:K06191 - ko00000 Glutaredoxin
PCJBFFDM_00885 2.67e-96 nrdI - - F ko:K03647 - ko00000 Probably involved in ribonucleotide reductase function
PCJBFFDM_00886 0.0 nrdE 1.17.4.1 - F ko:K00525 ko00230,ko00240,ko01100,map00230,map00240,map01100 ko00000,ko00001,ko00002,ko01000,ko03400 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PCJBFFDM_00888 5.12e-243 nrdF 1.17.4.1 - F ko:K00526 ko00230,ko00240,ko01100,map00230,map00240,map01100 ko00000,ko00001,ko00002,ko01000,ko03400 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PCJBFFDM_00889 0.0 uvrA3 - - L ko:K03701 ko03420,map03420 ko00000,ko00001,ko03400 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
PCJBFFDM_00890 2.17e-40 - - - EGP ko:K08177,ko:K19577 - ko00000,ko02000 Major facilitator Superfamily
PCJBFFDM_00891 9.97e-36 yhjX - - EGP ko:K08177 - ko00000,ko02000 Major facilitator Superfamily
PCJBFFDM_00892 1.08e-249 - - - S ko:K06889 - ko00000 alpha beta
PCJBFFDM_00893 1.29e-127 ctc - - J ko:K02897 ko03010,map03010 ko00000,ko00001,ko00002,ko03011 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
PCJBFFDM_00894 1.47e-121 - - - D ko:K06199 - ko00000,ko02000 Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PCJBFFDM_00895 1e-76 crcB - - U ko:K06199 - ko00000,ko02000 Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PCJBFFDM_00896 1.11e-96 - - - K - - - Acetyltransferase (GNAT) domain
PCJBFFDM_00898 8.14e-290 ilvE 2.6.1.42 - E ko:K00826 ko00270,ko00280,ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00270,map00280,map00290,map00770,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Amino-transferase class IV
PCJBFFDM_00899 3.02e-174 - - - S - - - UPF0126 domain
PCJBFFDM_00900 7.89e-46 rpsT - - J ko:K02968 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds directly to 16S ribosomal RNA
PCJBFFDM_00901 0.0 lepA - - M ko:K03596 ko05134,map05134 ko00000,ko00001 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
PCJBFFDM_00902 7.41e-297 hemN - - H - - - Involved in the biosynthesis of porphyrin-containing compound
PCJBFFDM_00903 3.27e-186 - 1.1.1.100 - IQ ko:K00059 ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 Oxidoreductase, short chain dehydrogenase reductase family protein
PCJBFFDM_00904 0.0 - - - C - - - Acyl-CoA reductase (LuxC)
PCJBFFDM_00905 3.03e-277 - - - H - - - long-chain-fatty-acid--luciferin-component ligase, acyl-protein synthase
PCJBFFDM_00906 3.31e-299 - - - F - - - Psort location CytoplasmicMembrane, score 10.00
PCJBFFDM_00907 0.0 gltB 1.4.1.13, 1.4.1.14, 1.4.7.1 - E ko:K00265,ko:K00284 ko00250,ko00630,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00250,map00630,map00910,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko01000 glutamate synthase NADPH large subunit
PCJBFFDM_00908 0.0 gltD 1.4.1.13, 1.4.1.14 - C ko:K00266 ko00250,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00250,map00910,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko01000 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
PCJBFFDM_00909 3.85e-98 - - - - - - - -
PCJBFFDM_00910 0.0 glgA 2.4.1.342 GT4 G ko:K16148 ko00500,ko01100,map00500,map01100 ko00000,ko00001,ko01000,ko01003 Starch synthase catalytic domain
PCJBFFDM_00911 1.11e-202 ylmA 3.6.3.34 - P ko:K02013 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ATPases associated with a variety of cellular activities
PCJBFFDM_00912 9.73e-254 trmI 2.1.1.219, 2.1.1.220 - J ko:K07442 - ko00000,ko01000,ko03016 Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
PCJBFFDM_00913 1.67e-128 sixA - - T ko:K08296 - ko00000,ko01000 Phosphoglycerate mutase family
PCJBFFDM_00914 0.0 metE 2.1.1.14 - E ko:K00549 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
PCJBFFDM_00915 5.77e-202 metF 1.5.1.20 - E ko:K00297 ko00670,ko00720,ko01100,ko01120,ko01200,ko01523,map00670,map00720,map01100,map01120,map01200,map01523 ko00000,ko00001,ko00002,ko01000 Methylenetetrahydrofolate reductase
PCJBFFDM_00916 0.0 glnE 2.7.7.42, 2.7.7.89 - H ko:K00982 - ko00000,ko01000 Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell
PCJBFFDM_00917 8.48e-241 pyrB 2.1.3.2 - F ko:K00609 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the ATCase OTCase family
PCJBFFDM_00918 1.06e-96 pyrI - - F ko:K00610 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002 Aspartate carbamoyltransferase regulatory chain, allosteric domain protein
PCJBFFDM_00919 0.0 pyrC 3.5.2.3 - F ko:K01465 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
PCJBFFDM_00920 5.87e-228 pyrF 4.1.1.23 - F ko:K01591 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the OMP decarboxylase family. Type 2 subfamily
PCJBFFDM_00921 5.08e-198 pyrK - - C ko:K02823 ko00240,ko01100,map00240,map01100 ko00000,ko00001 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B
PCJBFFDM_00922 8.22e-230 pyrD 1.3.1.14 - F ko:K17828 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
PCJBFFDM_00923 9.36e-160 pyrE 2.4.2.10 - F ko:K00762 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
PCJBFFDM_00924 6.03e-210 - - - K - - - Bacterial regulatory helix-turn-helix protein, lysR family
PCJBFFDM_00925 0.0 thiC 4.1.99.17 - H ko:K03147 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
PCJBFFDM_00926 1.36e-140 - - - J - - - Acetyltransferase (GNAT) domain
PCJBFFDM_00927 4.36e-89 arsC 1.20.4.1, 2.8.4.2 - T ko:K03741,ko:K18701 - ko00000,ko01000 Belongs to the low molecular weight phosphotyrosine protein phosphatase family
PCJBFFDM_00928 7.71e-278 - 2.1.1.14 - E ko:K00549 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score 8.87
PCJBFFDM_00929 3.66e-157 - 2.3.1.18, 2.3.1.79 - S ko:K00633,ko:K00661 - ko00000,ko01000 Maltose acetyltransferase
PCJBFFDM_00930 6.64e-67 - - - K - - - helix_turn_helix, Arsenical Resistance Operon Repressor
PCJBFFDM_00931 4.13e-180 - - - S - - - SdpI/YhfL protein family
PCJBFFDM_00932 3.2e-157 - 3.8.1.2 - S ko:K01560,ko:K07025 ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120 ko00000,ko00001,ko01000 Haloacid dehalogenase-like hydrolase
PCJBFFDM_00933 0.0 nnrD 4.2.1.136, 5.1.99.6 - H ko:K17758,ko:K17759 - ko00000,ko01000 Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
PCJBFFDM_00934 3.1e-160 - - - V ko:K02003 - ko00000,ko00002,ko02000 ABC transporter
PCJBFFDM_00937 1.8e-83 - - - - - - - -
PCJBFFDM_00938 9.76e-125 - - - M - - - Peptidase family M23
PCJBFFDM_00939 0.0 fadD1 6.2.1.3 - I ko:K01897 ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920 ko00000,ko00001,ko00002,ko01000,ko01004,ko04147 AMP-binding enzyme
PCJBFFDM_00940 0.0 - - - G - - - ABC transporter substrate-binding protein
PCJBFFDM_00941 1.58e-305 icd 1.1.1.42 - C ko:K00031 ko00020,ko00480,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,ko04146,map00020,map00480,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230,map04146 br01601,ko00000,ko00001,ko00002,ko01000 Belongs to the isocitrate and isopropylmalate dehydrogenases family
PCJBFFDM_00942 2.74e-266 guaB3 1.1.1.205 - F ko:K00088 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko04147 IMP dehydrogenase family protein
PCJBFFDM_00943 4.75e-138 dnaQ 2.7.7.7 - L ko:K02342 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 Exonuclease, DNA polymerase III, epsilon subunit family
PCJBFFDM_00944 3.58e-93 - - - U ko:K06956 - ko00000 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
PCJBFFDM_00945 2.71e-316 glmU 2.3.1.157, 2.7.7.23 - M ko:K04042 ko00520,ko01100,ko01130,map00520,map01100,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
PCJBFFDM_00946 3.94e-88 rsfS - - J ko:K09710 - ko00000,ko03009 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
PCJBFFDM_00947 7.33e-183 gpmB 3.1.3.85, 5.4.2.11 - G ko:K01834,ko:K22306 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Phosphoglycerate mutase family
PCJBFFDM_00948 2.54e-169 - - - - - - - -
PCJBFFDM_00950 6.91e-298 - - - K - - - Fic/DOC family
PCJBFFDM_00951 1.17e-92 pdxH - - S ko:K07006 - ko00000 Pfam:Pyridox_oxidase
PCJBFFDM_00952 0.0 - - - M - - - domain protein
PCJBFFDM_00955 1.72e-210 gpmB 3.1.3.85, 5.4.2.11 - G ko:K01834,ko:K22306 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Phosphoglycerate mutase family
PCJBFFDM_00956 1.48e-219 corA - - P ko:K03284 - ko00000,ko02000 CorA-like Mg2+ transporter protein
PCJBFFDM_00957 1.93e-182 - - - ET ko:K10005 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Bacterial periplasmic substrate-binding proteins
PCJBFFDM_00958 0.0 leuS 6.1.1.4 - J ko:K01869 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Belongs to the class-I aminoacyl-tRNA synthetase family
PCJBFFDM_00959 4.58e-137 comEA - - L ko:K02237 - ko00000,ko00002,ko02044 Helix-hairpin-helix motif
PCJBFFDM_00960 0.0 comEC - - S ko:K02238 - ko00000,ko00002,ko02044 Competence protein
PCJBFFDM_00961 2.13e-228 holA 2.7.7.7 - L ko:K02340 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase III delta subunit
PCJBFFDM_00962 7.17e-119 tsaE - - S ko:K06925 - ko00000,ko03016 Threonylcarbamoyl adenosine biosynthesis protein TsaE
PCJBFFDM_00963 6.89e-190 yeaZ - - O ko:K14742 - ko00000,ko03016 Glycoprotease family
PCJBFFDM_00964 1.73e-133 rimI 2.3.1.128 - K ko:K03789 - ko00000,ko01000,ko03009 FR47-like protein
PCJBFFDM_00965 6.55e-250 tsaD 2.3.1.234 - O ko:K01409 - ko00000,ko01000,ko03016 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
PCJBFFDM_00967 4.62e-152 yoaP - - E - - - YoaP-like
PCJBFFDM_00968 7.51e-238 cbh 3.5.1.24 - M ko:K01442 ko00120,ko00121,ko01100,map00120,map00121,map01100 ko00000,ko00001,ko01000 Linear amide C-N hydrolase, choloylglycine hydrolase family protein
PCJBFFDM_00969 3.51e-154 - - - S ko:K16925 - ko00000,ko00002,ko02000 ABC-type cobalt transport system, permease component
PCJBFFDM_00970 1.11e-92 - - - K - - - MerR family regulatory protein
PCJBFFDM_00971 2.21e-253 adh 1.1.1.1 - C ko:K00001 ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220 ko00000,ko00001,ko01000 Zinc-binding dehydrogenase
PCJBFFDM_00972 3.1e-184 - 4.1.1.44 - S ko:K01607 ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220 ko00000,ko00001,ko01000 Carboxymuconolactone decarboxylase family
PCJBFFDM_00973 3.17e-283 - 2.1.1.14 - E ko:K00549 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score 8.87
PCJBFFDM_00974 5.77e-100 - - - S - - - Psort location CytoplasmicMembrane, score
PCJBFFDM_00975 3.16e-234 - - - P - - - Cation efflux family
PCJBFFDM_00978 4.3e-174 - - - - ko:K03646 - ko00000,ko02000 -
PCJBFFDM_00979 6.87e-204 - - - - - - - -
PCJBFFDM_00980 4.49e-185 mazG 3.6.1.66 - S ko:K02428,ko:K02499 ko00230,map00230 ko00000,ko00001,ko01000,ko03036 Psort location Cytoplasmic, score 8.87
PCJBFFDM_00981 0.0 - 3.4.22.40 - E ko:K01372 - ko00000,ko01000,ko01002 Peptidase C1-like family
PCJBFFDM_00982 7.23e-226 - - - S - - - IMP dehydrogenase activity
PCJBFFDM_00983 0.0 ybiT - - S ko:K06158 - ko00000,ko03012 ABC transporter
PCJBFFDM_00984 4.74e-145 pncA 3.5.1.19 - Q ko:K08281 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko01000 Isochorismatase family
PCJBFFDM_00985 4.53e-88 ogt 2.1.1.63 - L ko:K00567,ko:K07443 - ko00000,ko01000,ko03400 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
PCJBFFDM_00987 2.77e-19 - - - - - - - -
PCJBFFDM_00988 0.0 - - - S - - - Psort location Cytoplasmic, score 8.87
PCJBFFDM_00989 2.79e-180 - - - S - - - Domain of unknown function (DUF4194)
PCJBFFDM_00991 3.54e-177 - - - S - - - Psort location Cytoplasmic, score 8.87
PCJBFFDM_00993 0.0 uvrA - - L ko:K03701 ko03420,map03420 ko00000,ko00001,ko03400 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
PCJBFFDM_00994 0.0 uvrC - - L ko:K03703 ko03420,map03420 ko00000,ko00001,ko03400 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
PCJBFFDM_00995 1.7e-233 aroE 1.1.1.25 - E ko:K00014 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Shikimate dehydrogenase substrate binding domain
PCJBFFDM_00996 1.54e-218 yvcJ - - S ko:K06958 - ko00000,ko03019 Displays ATPase and GTPase activities
PCJBFFDM_00997 2.1e-219 whiA - - K ko:K09762 - ko00000 May be required for sporulation
PCJBFFDM_00998 3.72e-281 pgk 2.7.2.3, 5.3.1.1 - F ko:K00927,ko:K01803 ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko04147 Phosphoglycerate kinase
PCJBFFDM_00999 4.01e-191 tpiA 5.3.1.1 - G ko:K01803 ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko04147 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
PCJBFFDM_01000 2.47e-44 secG - - U ko:K03075 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Preprotein translocase SecG subunit
PCJBFFDM_01001 1.58e-208 - - - S - - - Sucrose-6F-phosphate phosphohydrolase
PCJBFFDM_01002 0.0 aspC 2.6.1.1, 2.6.1.2, 2.6.1.66 - E ko:K00812,ko:K08969,ko:K14260 ko00220,ko00250,ko00270,ko00290,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00290,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Aminotransferase, class I II
PCJBFFDM_01004 3.6e-38 - - - H ko:K03811 - ko00000,ko02000 Nicotinamide mononucleotide transporter
PCJBFFDM_01005 3.29e-89 - - - H ko:K03811 - ko00000,ko02000 Nicotinamide mononucleotide transporter
PCJBFFDM_01006 1.86e-60 - - - H - - - ATPase kinase involved in NAD metabolism
PCJBFFDM_01007 4.69e-260 tal 2.2.1.2 - H ko:K00616 ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
PCJBFFDM_01008 0.0 tkt 2.2.1.1 - H ko:K00615 ko00030,ko00710,ko01051,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01051,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the transketolase family
PCJBFFDM_01009 3.25e-250 hrcA - - K ko:K03705 - ko00000,ko03000 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
PCJBFFDM_01010 7.8e-262 dnaJ - - O ko:K03686 - ko00000,ko03029,ko03110 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
PCJBFFDM_01011 1.58e-201 - - - G - - - Fructosamine kinase
PCJBFFDM_01012 1.44e-199 uppP 3.6.1.27 - V ko:K06153 ko00550,map00550 ko00000,ko00001,ko01000,ko01011 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
PCJBFFDM_01013 5.61e-200 - - - S - - - PAC2 family
PCJBFFDM_01021 3.74e-48 - - - - - - - -
PCJBFFDM_01022 2.22e-98 garA - - T - - - Inner membrane component of T3SS, cytoplasmic domain
PCJBFFDM_01023 5.29e-145 merR2 - - K - - - helix_turn_helix, mercury resistance
PCJBFFDM_01024 1.54e-80 - - - - - - - -
PCJBFFDM_01025 5.93e-181 nt5e 3.1.3.18 - S ko:K01091 ko00630,ko01100,ko01110,ko01130,map00630,map01100,map01110,map01130 ko00000,ko00001,ko01000 HAD-hyrolase-like
PCJBFFDM_01026 2.24e-81 rbpA - - K - - - Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters
PCJBFFDM_01027 0.0 helY - - L ko:K03727 - ko00000,ko01000 DEAD DEAH box helicase
PCJBFFDM_01028 2.4e-73 - - - - - - - -
PCJBFFDM_01029 0.0 - - - K - - - WYL domain
PCJBFFDM_01030 0.0 ugp 2.7.7.9 - G ko:K00963 ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130 ko00000,ko00001,ko00002,ko01000 UTP-glucose-1-phosphate uridylyltransferase
PCJBFFDM_01032 8.64e-92 - - - - - - - -
PCJBFFDM_01033 0.0 der - - F ko:K03977 - ko00000,ko03009 GTPase that plays an essential role in the late steps of ribosome biogenesis
PCJBFFDM_01034 9.79e-184 rluB 5.4.99.19, 5.4.99.22 - J ko:K06178,ko:K06183 - ko00000,ko01000,ko03009 Belongs to the pseudouridine synthase RsuA family
PCJBFFDM_01035 8.38e-208 - - - U ko:K06188 - ko00000,ko02000 Belongs to the MIP aquaporin (TC 1.A.8) family
PCJBFFDM_01036 1.69e-48 - - - - - - - -
PCJBFFDM_01037 0.0 purH 2.1.2.3, 3.5.4.10 - F ko:K00602 ko00230,ko00670,ko01100,ko01110,ko01130,ko01523,map00230,map00670,map01100,map01110,map01130,map01523 ko00000,ko00001,ko00002,ko01000,ko04147 Bifunctional purine biosynthesis protein PurH
PCJBFFDM_01038 1.8e-316 - - - - - - - -
PCJBFFDM_01039 1.82e-204 sucD 6.2.1.5 - C ko:K01902 ko00020,ko00640,ko00660,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00640,map00660,map00720,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
PCJBFFDM_01040 1.11e-280 sucC 6.2.1.5 - F ko:K01903 ko00020,ko00640,ko00660,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00640,map00660,map00720,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit
PCJBFFDM_01041 5.27e-130 apt 2.4.2.7 - F ko:K00759 ko00230,ko01100,map00230,map01100 ko00000,ko00001,ko01000,ko04147 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
PCJBFFDM_01042 3.98e-83 yajC - - U ko:K03210 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Preprotein translocase subunit
PCJBFFDM_01043 9.7e-256 ruvB 3.6.4.12 - L ko:K03551 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
PCJBFFDM_01044 1.34e-137 ruvA 3.6.4.12 - L ko:K03550 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
PCJBFFDM_01045 2.73e-129 ruvC 3.1.22.4 - L ko:K01159 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
PCJBFFDM_01046 2.38e-172 yebC - - K - - - transcriptional regulatory protein
PCJBFFDM_01047 1.17e-143 pgsA1 2.7.8.11, 2.7.8.5 - I ko:K00995,ko:K00999 ko00562,ko00564,ko01100,ko04070,map00562,map00564,map01100,map04070 ko00000,ko00001,ko01000 CDP-alcohol phosphatidyltransferase
PCJBFFDM_01048 0.0 thrS 6.1.1.3 - J ko:K01868 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
PCJBFFDM_01049 3.22e-182 - - - S - - - Bacterial protein of unknown function (DUF881)
PCJBFFDM_01050 2.68e-64 sbp - - S - - - Protein of unknown function (DUF1290)
PCJBFFDM_01051 2.27e-222 - - - S - - - Bacterial protein of unknown function (DUF881)
PCJBFFDM_01052 6.93e-133 pgsA2 2.7.8.41, 2.7.8.5 - I ko:K00995,ko:K08744 ko00564,ko01100,map00564,map01100 ko00000,ko00001,ko01000 Belongs to the CDP-alcohol phosphatidyltransferase class-I family
PCJBFFDM_01053 1.24e-199 hisG 2.4.2.17 - F ko:K00765,ko:K02502 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 ATP phosphoribosyltransferase
PCJBFFDM_01054 1.2e-54 hisE 3.6.1.31 - E ko:K01523 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Phosphoribosyl-ATP pyrophosphohydrolase
PCJBFFDM_01055 2.25e-137 rpe 5.1.3.1 - G ko:K01783 ko00030,ko00040,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Ribulose-phosphate 3-epimerase
PCJBFFDM_01056 2.39e-231 lgt - - M - - - Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
PCJBFFDM_01057 6.18e-205 trpA 4.2.1.20 - E ko:K01695 ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
PCJBFFDM_01058 0.0 trpB 4.2.1.20 - E ko:K01696 ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
PCJBFFDM_01059 0.0 trpE 4.1.3.27 - E ko:K01657 ko00400,ko00405,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00400,map00405,map01100,map01110,map01130,map01230,map02024,map02025 ko00000,ko00001,ko00002,ko01000 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
PCJBFFDM_01060 1.12e-95 hisI 3.5.4.19, 3.6.1.31 - E ko:K01496,ko:K11755 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
PCJBFFDM_01061 5.63e-178 hisF 4.1.3.27 - E ko:K01657,ko:K02500 ko00340,ko00400,ko00405,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00340,map00400,map00405,map01100,map01110,map01130,map01230,map02024,map02025 ko00000,ko00001,ko00002,ko01000 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
PCJBFFDM_01062 1.86e-286 rlmN 2.1.1.192 - J ko:K06941 - ko00000,ko01000,ko03009 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs
PCJBFFDM_01063 5.62e-228 cdsA 2.7.7.41 - I ko:K00981 ko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070 ko00000,ko00001,ko00002,ko01000 Cytidylyltransferase family
PCJBFFDM_01064 4.41e-119 frr - - J ko:K02838 - ko00000,ko03012 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
PCJBFFDM_01065 2.04e-172 pyrH 2.7.4.22 - F ko:K09903 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko01000 Catalyzes the reversible phosphorylation of UMP to UDP
PCJBFFDM_01067 6.23e-184 tsf - - J ko:K02357 - ko00000,ko03012,ko03029 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
PCJBFFDM_01068 7.95e-183 rpsB - - J ko:K02967 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the universal ribosomal protein uS2 family
PCJBFFDM_01069 1.22e-107 def 3.5.1.88 - J ko:K01462 - ko00000,ko01000 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
PCJBFFDM_01070 0.0 fadD3 6.2.1.3 - I ko:K01897 ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920 ko00000,ko00001,ko00002,ko01000,ko01004,ko04147 long-chain-fatty acid CoA ligase
PCJBFFDM_01071 1.25e-157 - - - - - - - -
PCJBFFDM_01073 1.67e-241 prs 2.7.6.1 - F ko:K00948 ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PCJBFFDM_01074 1.1e-180 nadD 2.7.7.18 - H ko:K00969 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
PCJBFFDM_01075 5.54e-131 - - - - - - - -
PCJBFFDM_01076 5.01e-311 proA 1.2.1.41 - E ko:K00147 ko00330,ko00332,ko01100,ko01110,ko01130,ko01230,map00330,map00332,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
PCJBFFDM_01077 0.0 glyA 2.1.2.1 - E ko:K00600 ko00260,ko00460,ko00630,ko00670,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko01523,map00260,map00460,map00630,map00670,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map01523 ko00000,ko00001,ko00002,ko01000 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
PCJBFFDM_01078 0.0 thrC 4.2.3.1 - E ko:K01733 ko00260,ko00750,ko01100,ko01110,ko01120,ko01230,map00260,map00750,map01100,map01110,map01120,map01230 ko00000,ko00001,ko00002,ko01000 Threonine synthase N terminus
PCJBFFDM_01079 2.93e-297 - - - EGP - - - Transporter major facilitator family protein
PCJBFFDM_01080 6.3e-140 - - - E - - - haloacid dehalogenase-like hydrolase
PCJBFFDM_01081 9.31e-221 - - - G - - - Fic/DOC family
PCJBFFDM_01082 7.82e-182 - - - - - - - -
PCJBFFDM_01083 9.96e-209 - 1.1.1.127 - IQ ko:K00065 ko00040,map00040 ko00000,ko00001,ko01000 Enoyl-(Acyl carrier protein) reductase
PCJBFFDM_01084 1.26e-214 - - - S - - - Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
PCJBFFDM_01085 2.43e-100 - 3.4.13.22 - S ko:K08641,ko:K11206 ko01502,ko02020,map01502,map02020 ko00000,ko00001,ko00002,ko01000,ko01002,ko01011,ko01504 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
PCJBFFDM_01087 2.31e-122 bcp 1.11.1.15 - O ko:K03564 - ko00000,ko01000 Redoxin
PCJBFFDM_01088 0.000284 - - - S ko:K07005 - ko00000 Pyridoxamine 5'-phosphate oxidase
PCJBFFDM_01089 1.04e-122 - - - S ko:K07005 - ko00000 Pyridoxamine 5'-phosphate oxidase
PCJBFFDM_01090 0.0 - - - S - - - Histidine phosphatase superfamily (branch 2)
PCJBFFDM_01091 1.13e-59 - - - L - - - transposition
PCJBFFDM_01092 1.07e-30 - - - C - - - Acetamidase/Formamidase family
PCJBFFDM_01093 5.29e-78 - - - K ko:K07979 - ko00000,ko03000 helix_turn_helix gluconate operon transcriptional repressor
PCJBFFDM_01094 5.83e-223 - - - V ko:K01990 - ko00000,ko00002,ko02000 ATPases associated with a variety of cellular activities
PCJBFFDM_01095 1.92e-151 - - - S - - - ABC-2 family transporter protein
PCJBFFDM_01096 5.07e-158 - - - S - - - Haloacid dehalogenase-like hydrolase
PCJBFFDM_01097 0.0 recN - - L ko:K03631 - ko00000,ko03400 May be involved in recombinational repair of damaged DNA
PCJBFFDM_01098 2.71e-228 nadK 2.7.1.23 - H ko:K00858 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko01000 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
PCJBFFDM_01099 0.0 trkH - - P ko:K03498 - ko00000,ko02000 Cation transport protein
PCJBFFDM_01100 1.25e-150 trkA - - P ko:K03499 - ko00000,ko02000 TrkA-N domain
PCJBFFDM_01101 4.79e-173 tlyA 2.1.1.226, 2.1.1.227 - J ko:K06442 - ko00000,ko01000,ko03009 Ribosomal RNA large subunit methyltransferase J
PCJBFFDM_01102 2.65e-246 - - - G - - - Haloacid dehalogenase-like hydrolase
PCJBFFDM_01103 1.36e-222 - - - L - - - Tetratricopeptide repeat
PCJBFFDM_01104 1.91e-316 tyrS 6.1.1.1 - J ko:K01866 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
PCJBFFDM_01105 0.0 - - - S - - - Protein of unknown function (DUF975)
PCJBFFDM_01106 1.17e-180 - - - S - - - Putative ABC-transporter type IV
PCJBFFDM_01107 4.08e-123 - - - S ko:K06950 - ko00000 Metal dependent phosphohydrolases with conserved 'HD' motif.
PCJBFFDM_01108 0.0 argH 4.3.2.1 - E ko:K01755 ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,map00220,map00250,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000,ko04147 argininosuccinate lyase
PCJBFFDM_01109 5.05e-302 argG 6.3.4.5 - E ko:K01940 ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,ko05418,map00220,map00250,map01100,map01110,map01130,map01230,map05418 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the argininosuccinate synthase family. Type 1 subfamily
PCJBFFDM_01110 5.46e-109 argR - - K ko:K03402 - ko00000,ko03000 Regulates arginine biosynthesis genes
PCJBFFDM_01111 2.32e-235 argF 2.1.3.3 - E ko:K00611 ko00220,ko01100,ko01110,ko01130,ko01230,map00220,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
PCJBFFDM_01112 5.56e-305 argD 2.6.1.11, 2.6.1.17 - E ko:K00821 ko00220,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00220,map00300,map01100,map01110,map01120,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Aminotransferase class-III
PCJBFFDM_01113 5.02e-228 argB 2.7.2.8 - E ko:K00930 ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the acetylglutamate kinase family. ArgB subfamily
PCJBFFDM_01114 1.33e-273 argJ 2.3.1.1, 2.3.1.35 - E ko:K00620 ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
PCJBFFDM_01115 3.32e-263 argC 1.2.1.38 - E ko:K00145 ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
PCJBFFDM_01116 3.81e-148 - - - - - - - -
PCJBFFDM_01117 0.0 pheT 6.1.1.20 - J ko:K01890 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Phenylalanyl-tRNA synthetase beta
PCJBFFDM_01118 9.1e-261 pheS 6.1.1.20 - J ko:K01889 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
PCJBFFDM_01119 7.78e-202 tsnR - - J ko:K03437 - ko00000,ko03016 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PCJBFFDM_01120 5.23e-125 yvdD 3.2.2.10 - S ko:K06966 ko00230,ko00240,map00230,map00240 ko00000,ko00001,ko01000 Possible lysine decarboxylase
PCJBFFDM_01122 2.06e-25 - - - - - - - -
PCJBFFDM_01124 2.76e-15 - - - L ko:K07451 - ko00000,ko01000,ko02048 HNH endonuclease
PCJBFFDM_01125 9.27e-146 - - - L - - - Uracil DNA glycosylase superfamily
PCJBFFDM_01126 1.52e-19 - - - V - - - Type II restriction enzyme, methylase subunits
PCJBFFDM_01127 0.0 glnA 6.3.1.2 - E ko:K01915 ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727 ko00000,ko00001,ko01000,ko04147 glutamine synthetase
PCJBFFDM_01128 5.03e-183 - - - S - - - Domain of unknown function (DUF4191)
PCJBFFDM_01129 7.43e-314 lpdA 1.8.1.4 - C ko:K00382 ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200 br01601,ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
PCJBFFDM_01130 1.66e-126 - - - S - - - Protein of unknown function (DUF3043)
PCJBFFDM_01131 0.0 argE - - E - - - Peptidase dimerisation domain
PCJBFFDM_01132 1.27e-186 ykoC - - P ko:K16785 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Cobalt transport protein
PCJBFFDM_01133 0.0 ykoD - - P ko:K16785,ko:K16786,ko:K16787 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ATPases associated with a variety of cellular activities
PCJBFFDM_01134 3.23e-110 ykoE - - S ko:K16925 - ko00000,ko00002,ko02000 ABC-type cobalt transport system, permease component
PCJBFFDM_01135 3.91e-259 mrp - - D ko:K03593 - ko00000,ko03029,ko03036 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP
PCJBFFDM_01136 0.0 ligA 6.5.1.2 - L ko:K01972 ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430 ko00000,ko00001,ko01000,ko03032,ko03400 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
PCJBFFDM_01137 0.0 - - - S - - - Tetratricopeptide repeat
PCJBFFDM_01138 0.0 - - - M - - - 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
PCJBFFDM_01139 0.0 - 2.8.2.22 - S ko:K01023 - ko00000,ko01000 Arylsulfotransferase Ig-like domain
PCJBFFDM_01140 6.33e-186 - - - P ko:K16784 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ATPases associated with a variety of cellular activities
PCJBFFDM_01141 2.37e-280 - - - E - - - Aminotransferase class I and II
PCJBFFDM_01142 3.28e-181 ppgK 2.7.1.2, 2.7.1.63 - GK ko:K00845,ko:K00886 ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 ROK family
PCJBFFDM_01143 9.03e-258 - - - S - - - Glycosyltransferase, group 2 family protein
PCJBFFDM_01144 3.17e-188 tenA 3.5.99.2 - K ko:K03707 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko01000,ko03000 Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
PCJBFFDM_01145 3.73e-63 - - - J ko:K07574 - ko00000,ko03009 CRS1_YhbY
PCJBFFDM_01146 0.0 - - - GP ko:K16785,ko:K16786,ko:K16787 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ABC transporter, ATP-binding protein
PCJBFFDM_01147 2.78e-139 - - - U - - - Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
PCJBFFDM_01148 0.0 - - - KL - - - Psort location Cytoplasmic, score 8.87
PCJBFFDM_01149 4.94e-149 - - - U ko:K10716 - ko00000,ko02000 Ion channel
PCJBFFDM_01150 3.87e-238 - - - EH - - - D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
PCJBFFDM_01151 1.05e-107 dtd - - J ko:K07560 - ko00000,ko01000,ko03016 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
PCJBFFDM_01152 4.22e-158 - - - S - - - alpha beta
PCJBFFDM_01154 1.54e-67 - - - S - - - Protein of unknown function DUF262
PCJBFFDM_01155 1.99e-244 - - - S - - - Protein of unknown function DUF262
PCJBFFDM_01156 1.08e-174 - - - S - - - Protein of unknown function DUF262
PCJBFFDM_01158 1.91e-242 - - - - - - - -
PCJBFFDM_01159 0.0 - 3.4.21.53 - O ko:K01338 ko04112,map04112 ko00000,ko00001,ko01000,ko01002 Putative ATP-dependent Lon protease
PCJBFFDM_01160 0.0 - - - H - - - PglZ domain
PCJBFFDM_01161 0.0 - 3.6.4.12 - K ko:K03655 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Putative DNA-binding domain
PCJBFFDM_01162 5.24e-65 - - - - - - - -
PCJBFFDM_01163 0.0 - - - LV - - - DNA restriction-modification system
PCJBFFDM_01164 0.0 - - - K - - - RNA-binding protein homologous to eukaryotic snRNP
PCJBFFDM_01165 2.54e-159 - - - S - - - Domain of unknown function (DUF1788)
PCJBFFDM_01166 5.78e-148 - - - S - - - Putative inner membrane protein (DUF1819)
PCJBFFDM_01168 1.96e-164 - - - E - - - Psort location Cytoplasmic, score 8.87
PCJBFFDM_01169 2.19e-167 - - - S - - - DUF218 domain
PCJBFFDM_01170 1.99e-300 tig - - D ko:K03545 - ko00000 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
PCJBFFDM_01171 4.88e-299 rnd 3.1.13.5 - J ko:K03684 - ko00000,ko01000,ko03016 3'-5' exonuclease
PCJBFFDM_01172 3.3e-102 - - - S - - - Protein of unknown function (DUF3000)
PCJBFFDM_01173 1.76e-210 pflA 1.97.1.4 - C ko:K04069 - ko00000,ko01000 Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PCJBFFDM_01174 0.0 pflB 2.3.1.54 - C ko:K00656 ko00620,ko00640,ko00650,ko01100,ko01120,map00620,map00640,map00650,map01100,map01120 ko00000,ko00001,ko01000 Pyruvate formate lyase-like
PCJBFFDM_01175 1.28e-41 - - - - - - - -
PCJBFFDM_01176 0.0 nadE 6.3.5.1 - H ko:K01950 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
PCJBFFDM_01177 1.3e-285 - - - S - - - Peptidase dimerisation domain
PCJBFFDM_01178 1.35e-199 - - - S - - - Sucrose-6F-phosphate phosphohydrolase
PCJBFFDM_01179 1.28e-191 metQ - - P ko:K02073 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 NLPA lipoprotein
PCJBFFDM_01180 4.13e-188 metN - - P ko:K02071 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
PCJBFFDM_01181 1.59e-144 metI - - P ko:K02072 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
PCJBFFDM_01182 2.16e-98 - - - - - - - -
PCJBFFDM_01184 1.24e-129 - - - V - - - Abi-like protein
PCJBFFDM_01185 2.26e-81 - - - L - - - Helix-turn-helix domain
PCJBFFDM_01187 0.0 - - - S - - - LPXTG-motif cell wall anchor domain protein
PCJBFFDM_01188 1.02e-312 dinF - - V - - - MatE
PCJBFFDM_01189 7.75e-130 ppiA 5.2.1.8 - G ko:K03767,ko:K03768 ko01503,ko04217,map01503,map04217 ko00000,ko00001,ko01000,ko03110,ko04147 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
PCJBFFDM_01190 0.0 relA 2.7.6.5, 3.1.7.2 - KT ko:K00951,ko:K01139 ko00230,map00230 ko00000,ko00001,ko01000,ko03009 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
PCJBFFDM_01191 5.02e-110 dut 3.6.1.23 - F ko:K01520 ko00240,ko00983,ko01100,map00240,map00983,map01100 ko00000,ko00001,ko00002,ko01000,ko03400 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA
PCJBFFDM_01192 8.5e-63 - - - S - - - Domain of unknown function (DUF4193)
PCJBFFDM_01193 1.94e-228 - - - S - - - Protein of unknown function (DUF3071)
PCJBFFDM_01194 3.82e-295 - - - S - - - Type I phosphodiesterase / nucleotide pyrophosphatase
PCJBFFDM_01195 0.0 gyrA2 5.99.1.3 - L ko:K02469 - ko00000,ko01000,ko03032,ko03400 DNA topoisomerase (ATP-hydrolyzing)
PCJBFFDM_01196 0.0 lhr - - L ko:K03724 - ko00000,ko01000,ko03400 DEAD DEAH box helicase
PCJBFFDM_01197 2.53e-42 - - - K ko:K07727 - ko00000,ko03000 Cro/C1-type HTH DNA-binding domain
PCJBFFDM_01198 7.86e-103 - - - S - - - Protein of unknown function (DUF2975)
PCJBFFDM_01199 2.11e-307 - - - T - - - Domain of unknown function (DUF4173)
PCJBFFDM_01200 8.52e-287 - - - G - - - Major Facilitator Superfamily
PCJBFFDM_01201 0.0 gyrB2 5.99.1.3 - L ko:K02470 - ko00000,ko01000,ko03032,ko03400 DNA topoisomerase (ATP-hydrolyzing)
PCJBFFDM_01202 3.32e-226 sigA - - K ko:K03086 - ko00000,ko03021 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
PCJBFFDM_01203 2.12e-151 - - - - - - - -
PCJBFFDM_01204 2.2e-252 idsA 2.5.1.1, 2.5.1.10, 2.5.1.29 - H ko:K13787 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000,ko01006 Belongs to the FPP GGPP synthase family
PCJBFFDM_01205 0.0 pknL 2.7.11.1 - KLT ko:K08884,ko:K12132 - ko00000,ko01000,ko01001 PASTA
PCJBFFDM_01206 4.33e-171 plsC2 2.3.1.51 - I ko:K00655 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko01004 Phosphate acyltransferases
PCJBFFDM_01207 4.49e-129 - - - - - - - -
PCJBFFDM_01208 3.23e-247 trpD 2.4.2.18 - F ko:K00766 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
PCJBFFDM_01209 0.0 secA - - U ko:K03070 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
PCJBFFDM_01210 5.45e-153 hpf - - J ko:K05808 - ko00000,ko03009 Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
PCJBFFDM_01211 9.05e-160 recX - - S ko:K03565 - ko00000,ko03400 Modulates RecA activity
PCJBFFDM_01212 4.97e-271 recA - - L ko:K03553 ko03440,map03440 ko00000,ko00001,ko00002,ko03400 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
PCJBFFDM_01213 7.07e-61 - - - S - - - Protein of unknown function (DUF3046)
PCJBFFDM_01214 3.83e-104 - - - K - - - Helix-turn-helix XRE-family like proteins
PCJBFFDM_01215 1.17e-125 cinA 3.5.1.42 - S ko:K03743 ko00760,map00760 ko00000,ko00001,ko01000 Belongs to the CinA family
PCJBFFDM_01216 1.29e-159 pgsA 2.7.8.41, 2.7.8.5 - I ko:K00995,ko:K08744 ko00564,ko01100,map00564,map01100 ko00000,ko00001,ko01000 Belongs to the CDP-alcohol phosphatidyltransferase class-I family
PCJBFFDM_01217 0.0 ftsK - - D ko:K03466 - ko00000,ko03036 FtsK SpoIIIE family protein
PCJBFFDM_01218 9.64e-248 miaA 2.5.1.75 - F ko:K00791 ko00908,ko01100,ko01110,map00908,map01100,map01110 ko00000,ko00001,ko01000,ko01006,ko03016 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
PCJBFFDM_01219 0.0 miaB 2.8.4.3 - H ko:K06168 - ko00000,ko01000,ko03016 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
PCJBFFDM_01220 6.96e-201 ywaC 2.7.6.5 - S ko:K07816 ko00230,map00230 ko00000,ko00001,ko01000 Region found in RelA / SpoT proteins
PCJBFFDM_01221 6.83e-228 - - - EG - - - EamA-like transporter family
PCJBFFDM_01222 4.11e-170 - - - S ko:K06890 - ko00000 Belongs to the BI1 family
PCJBFFDM_01223 9.48e-146 - - - S - - - Domain of unknown function (DUF5067)
PCJBFFDM_01224 3.12e-310 - - - T - - - Histidine kinase
PCJBFFDM_01225 8.7e-166 - - - K - - - helix_turn_helix, Lux Regulon
PCJBFFDM_01226 0.0 - - - S - - - Protein of unknown function DUF262
PCJBFFDM_01227 3.27e-150 - - - K - - - helix_turn_helix, Lux Regulon
PCJBFFDM_01228 2.58e-311 - - - T - - - Histidine kinase
PCJBFFDM_01229 1.72e-242 - - - V ko:K01990 - ko00000,ko00002,ko02000 ATPases associated with a variety of cellular activities
PCJBFFDM_01230 1.48e-287 - - - V ko:K01992 - ko00000,ko00002,ko02000 ABC-2 family transporter protein
PCJBFFDM_01231 2.39e-293 - - - V ko:K01992 - ko00000,ko00002,ko02000 ABC-2 family transporter protein
PCJBFFDM_01232 4.7e-267 - - - K - - - helix_turn_helix, arabinose operon control protein
PCJBFFDM_01233 5.47e-151 - 2.3.1.18, 2.3.1.79 - S ko:K00633,ko:K00661 - ko00000,ko01000 Bacterial transferase hexapeptide repeat protein
PCJBFFDM_01234 0.0 - - - V - - - Psort location CytoplasmicMembrane, score 9.99
PCJBFFDM_01235 0.0 acnA 4.2.1.3 - C ko:K01681 ko00020,ko00630,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230 br01601,ko00000,ko00001,ko00002,ko01000 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
PCJBFFDM_01236 0.0 ctpE - - P ko:K12952 - ko00000,ko01000 E1-E2 ATPase
PCJBFFDM_01237 2.14e-98 - - - - - - - -
PCJBFFDM_01238 4.58e-308 rumA 2.1.1.190 - J ko:K03215 - ko00000,ko01000,ko03009 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PCJBFFDM_01239 1.09e-171 - - - S - - - Protein of unknown function (DUF3159)
PCJBFFDM_01240 1.49e-193 - - - S - - - Protein of unknown function (DUF3710)
PCJBFFDM_01241 1.67e-219 xth 3.1.11.2 - L ko:K01142 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 Endonuclease/Exonuclease/phosphatase family
PCJBFFDM_01242 0.0 - - - EP ko:K02031,ko:K02032 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 Oligopeptide/dipeptide transporter, C-terminal region
PCJBFFDM_01243 1.18e-223 dppC - - EP ko:K02034,ko:K15582 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 N-terminal TM domain of oligopeptide transport permease C
PCJBFFDM_01244 1.45e-206 dppB - - EP ko:K02033,ko:K15581 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
PCJBFFDM_01245 0.0 dppA - - E ko:K02035,ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter, substrate-binding protein, family 5
PCJBFFDM_01246 2.28e-219 xerC - - D ko:K03733,ko:K04763 - ko00000,ko03036 Belongs to the 'phage' integrase family. XerC subfamily
PCJBFFDM_01248 2.11e-46 - - - - - - - -
PCJBFFDM_01249 2.11e-250 tyrA 1.3.1.12 - E ko:K00210,ko:K04517 ko00400,ko00401,ko01100,ko01110,ko01130,ko01230,map00400,map00401,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Prephenate dehydrogenase
PCJBFFDM_01250 1.59e-244 pheA 4.2.1.51, 5.4.99.5 - E ko:K04518,ko:K14170 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Prephenate dehydratase
PCJBFFDM_01251 1.43e-135 - - - - - - - -
PCJBFFDM_01252 0.0 typA - - T ko:K06207 - ko00000 Elongation factor G C-terminus
PCJBFFDM_01253 9.2e-317 nanT - - U ko:K03290,ko:K08178,ko:K08369 - ko00000,ko02000 Sugar (and other) transporter
PCJBFFDM_01254 6.41e-193 - 3.6.1.55 - F ko:K03574 - ko00000,ko01000,ko03400 NUDIX hydrolase
PCJBFFDM_01255 8.39e-196 soj - - D ko:K03496 - ko00000,ko03036,ko04812 CobQ CobB MinD ParA nucleotide binding domain protein
PCJBFFDM_01256 2.12e-224 xerD - - D ko:K03733,ko:K04763 - ko00000,ko03036 recombinase XerD
PCJBFFDM_01257 7.76e-81 rplT - - J ko:K02887 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
PCJBFFDM_01258 3.31e-35 rpmI - - J ko:K02916 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal protein L35
PCJBFFDM_01259 1.86e-139 infC - - J ko:K02520 - ko00000,ko03012,ko03029 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
PCJBFFDM_01260 2.3e-142 - 2.7.6.2 - H ko:K00949 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko01000 Thiamin pyrophosphokinase, vitamin B1 binding domain
PCJBFFDM_01261 4.82e-254 gap 1.2.1.12 - G ko:K00134 ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
PCJBFFDM_01262 8.17e-114 ybaK - - J ko:K03976 - ko00000,ko01000,ko03016 Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
PCJBFFDM_01263 1.33e-219 ispH 1.17.7.4 - IM ko:K03527 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
PCJBFFDM_01264 3.72e-238 - 5.1.3.3 - G ko:K01785 ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130 ko00000,ko00001,ko00002,ko01000 Aldose 1-epimerase
PCJBFFDM_01265 1.03e-48 - - - - - - - -
PCJBFFDM_01266 7.83e-127 sigH - - K ko:K03088 - ko00000,ko03021 Belongs to the sigma-70 factor family. ECF subfamily
PCJBFFDM_01267 0.0 murE 6.3.2.13 - M ko:K01928 ko00300,ko00550,map00300,map00550 ko00000,ko00001,ko01000,ko01011 Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
PCJBFFDM_01268 1.35e-239 - - - V - - - Acetyltransferase (GNAT) domain
PCJBFFDM_01269 0.0 folC 6.3.2.12, 6.3.2.17 - H ko:K11754 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko00002,ko01000 Mur ligase middle domain
PCJBFFDM_01270 0.0 pepP 3.4.11.9 - E ko:K01262 - ko00000,ko01000,ko01002 Aminopeptidase P, N-terminal domain
PCJBFFDM_01271 2.52e-124 - - - F - - - NUDIX domain
PCJBFFDM_01272 0.0 - - - P ko:K02031,ko:K02032 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 Belongs to the ABC transporter superfamily
PCJBFFDM_01273 5.18e-255 dppC - - EP ko:K02034 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
PCJBFFDM_01274 1.15e-242 dppB - - EP ko:K02033 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
PCJBFFDM_01275 0.0 - - - E ko:K02035 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 Bacterial extracellular solute-binding proteins, family 5 Middle
PCJBFFDM_01276 6.36e-277 - 2.7.1.2 - GK ko:K00845 ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 ROK family
PCJBFFDM_01277 1.65e-212 - 2.7.1.4 - G ko:K00847 ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100 ko00000,ko00001,ko01000 pfkB family carbohydrate kinase
PCJBFFDM_01278 5.88e-278 - - - S ko:K09704 - ko00000 Metal-independent alpha-mannosidase (GH125)
PCJBFFDM_01280 1.19e-315 - - - G - - - N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase)
PCJBFFDM_01281 3.24e-180 ftsQ - - D ko:K03589 ko04112,map04112 ko00000,ko00001,ko03036 Cell division protein FtsQ
PCJBFFDM_01282 0.0 murC 6.3.2.8 - M ko:K01924 ko00471,ko00550,ko01100,map00471,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Belongs to the MurCDEF family
PCJBFFDM_01283 1.05e-273 murG 2.4.1.227, 6.3.2.8 GT28 M ko:K01924,ko:K02563 ko00471,ko00550,ko01100,ko01502,ko04112,map00471,map00550,map01100,map01502,map04112 ko00000,ko00001,ko01000,ko01011 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
PCJBFFDM_01284 4.97e-259 ftsW 2.4.1.227 GT28 D ko:K02563,ko:K03588 ko00550,ko01100,ko01502,ko04112,map00550,map01100,map01502,map04112 ko00000,ko00001,ko01000,ko01011,ko02000,ko03036 Belongs to the SEDS family
PCJBFFDM_01285 0.0 murD 6.3.2.9 - M ko:K01925 ko00471,ko00550,ko01100,map00471,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
PCJBFFDM_01286 1.38e-251 mraY 2.7.8.13 - M ko:K01000 ko00550,ko01100,ko01502,map00550,map01100,map01502 ko00000,ko00001,ko01000,ko01011 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
PCJBFFDM_01287 0.0 murF 6.3.2.10 - M ko:K01929 ko00300,ko00550,ko01100,ko01502,map00300,map00550,map01100,map01502 ko00000,ko00001,ko01000,ko01011 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
PCJBFFDM_01288 1.04e-191 - - - M - - - Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
PCJBFFDM_01289 0.0 ftsI 3.4.16.4 - M ko:K03587 ko00550,ko01501,map00550,map01501 ko00000,ko00001,ko01000,ko01011,ko03036 Penicillin-binding protein, transpeptidase domain protein
PCJBFFDM_01290 7.27e-82 - - - D - - - Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
PCJBFFDM_01291 1.41e-242 rsmH 2.1.1.199 - J ko:K03438 - ko00000,ko01000,ko03009 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
PCJBFFDM_01292 5.51e-118 mraZ - - K ko:K03925 - ko00000 Belongs to the MraZ family
PCJBFFDM_01293 0.0 - - - L - - - DNA helicase
PCJBFFDM_01294 1.19e-276 serA 1.1.1.399, 1.1.1.95 - EH ko:K00058 ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko04147 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
PCJBFFDM_01295 2.49e-110 nrdR - - K ko:K07738 - ko00000,ko03000 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
PCJBFFDM_01296 8.85e-72 - - - M - - - Lysin motif
PCJBFFDM_01297 6.88e-170 lexA 3.4.21.88 - K ko:K01356 - ko00000,ko00002,ko01000,ko01002,ko03400 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
PCJBFFDM_01298 3.34e-192 czcD - - P ko:K16264 - ko00000,ko02000 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
PCJBFFDM_01299 3.25e-225 ldh 1.1.1.27, 1.1.1.37 - C ko:K00016,ko:K00024 ko00010,ko00020,ko00270,ko00620,ko00630,ko00640,ko00680,ko00710,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko04922,map00010,map00020,map00270,map00620,map00630,map00640,map00680,map00710,map00720,map01100,map01110,map01120,map01130,map01200,map04922 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the LDH MDH superfamily. LDH family
PCJBFFDM_01300 0.0 hflX - - S ko:K03665 - ko00000,ko03009 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
PCJBFFDM_01301 9.35e-145 rsmC 2.1.1.172 - J ko:K00564 - ko00000,ko01000,ko03009 Ribosomal protein L11 methyltransferase (PrmA)
PCJBFFDM_01302 0.0 hrpA 3.6.4.13 - L ko:K03578 - ko00000,ko01000 Helicase associated domain (HA2) Add an annotation
PCJBFFDM_01303 6.43e-242 - - - - - - - -
PCJBFFDM_01304 5.89e-237 - - - V - - - N-Acetylmuramoyl-L-alanine amidase
PCJBFFDM_01305 1.12e-127 - - - - - - - -
PCJBFFDM_01306 4.58e-71 - - - T - - - helix_turn_helix, Lux Regulon
PCJBFFDM_01307 8.03e-13 - - - T - - - Histidine kinase
PCJBFFDM_01308 3.05e-153 - - - V ko:K02003,ko:K09810 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ATPases associated with a variety of cellular activities
PCJBFFDM_01309 1.74e-277 - - - EGP ko:K18567,ko:K19577 - ko00000,ko02000 Major Facilitator Superfamily
PCJBFFDM_01310 2.02e-218 - - - M - - - Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses
PCJBFFDM_01311 2.49e-306 - - - S - - - Domain of unknown function (DUF5067)
PCJBFFDM_01312 0.0 glnA2 6.3.1.2 - E ko:K01915 ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727 ko00000,ko00001,ko01000,ko04147 glutamine synthetase
PCJBFFDM_01313 2.38e-167 hisA 5.3.1.16, 5.3.1.24 - E ko:K01814,ko:K01817 ko00340,ko00400,ko01100,ko01110,ko01130,ko01230,map00340,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Histidine biosynthesis protein
PCJBFFDM_01314 1.77e-156 hisH - - E ko:K02501 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
PCJBFFDM_01315 1.15e-163 - - - - - - - -
PCJBFFDM_01316 4.56e-142 hisB 3.1.3.15, 4.2.1.19 - E ko:K01089,ko:K01693 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Imidazoleglycerol-phosphate dehydratase
PCJBFFDM_01317 1.36e-287 hisC 2.6.1.9 - E ko:K00817 ko00340,ko00350,ko00360,ko00400,ko00401,ko00960,ko01100,ko01110,ko01130,ko01230,map00340,map00350,map00360,map00400,map00401,map00960,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
PCJBFFDM_01318 0.0 hisD 1.1.1.23 - E ko:K00013 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
PCJBFFDM_01319 0.0 dnaE 2.7.7.7 - L ko:K02337 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase III alpha subunit
PCJBFFDM_01320 3.52e-225 rluD 5.4.99.23 - J ko:K06180 - ko00000,ko01000,ko03009 Responsible for synthesis of pseudouridine from uracil
PCJBFFDM_01321 5.61e-121 lspA 3.4.23.36 - MU ko:K03101 ko03060,map03060 ko00000,ko00001,ko01000,ko01002 This protein specifically catalyzes the removal of signal peptides from prolipoproteins
PCJBFFDM_01322 2.23e-65 - - - V - - - DivIVA protein
PCJBFFDM_01323 9.14e-55 - - - S ko:K02221 - ko00000,ko02044 YGGT family
PCJBFFDM_01324 5.84e-105 sepF - - D ko:K09772 - ko00000,ko03036 Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
PCJBFFDM_01325 4.66e-279 ftsZ - - D ko:K03531 ko04112,map04112 ko00000,ko00001,ko02048,ko03036,ko04812 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
PCJBFFDM_01326 5.34e-310 dus - - J - - - Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PCJBFFDM_01327 0.0 glyQS 6.1.1.14 - J ko:K01880 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Catalyzes the attachment of glycine to tRNA(Gly)
PCJBFFDM_01328 3.3e-137 - - - S ko:K02664 - ko00000,ko02035,ko02044 Pilus assembly protein, PilO
PCJBFFDM_01329 1.98e-211 - - - NU - - - PFAM Fimbrial assembly family protein
PCJBFFDM_01330 5.34e-245 pilM - - NU ko:K02662 - ko00000,ko02035,ko02044 Type IV pilus assembly protein PilM;
PCJBFFDM_01331 2.69e-195 pppA 3.4.23.43 - NOU ko:K02654 - ko00000,ko00002,ko01000,ko01002,ko02035,ko02044 Bacterial Peptidase A24 N-terminal domain
PCJBFFDM_01332 0.0 - - - - - - - -
PCJBFFDM_01333 1.23e-293 tapC - - U ko:K02653 - ko00000,ko02035,ko02044 Type II secretion system (T2SS), protein F
PCJBFFDM_01334 2.3e-51 - - - NU ko:K02650 ko02020,map02020 ko00000,ko00001,ko02035,ko02044 Prokaryotic N-terminal methylation motif
PCJBFFDM_01335 5.17e-134 - - - S - - - Prokaryotic N-terminal methylation motif
PCJBFFDM_01336 5.88e-176 - - - NU ko:K02671 - ko00000,ko02035,ko02044 Prokaryotic N-terminal methylation motif
PCJBFFDM_01337 0.0 pilB - - NU ko:K02652 - ko00000,ko02035,ko02044 Type II/IV secretion system protein
PCJBFFDM_01338 0.0 pilT - - NU ko:K02669 - ko00000,ko02035,ko02044 Type II/IV secretion system protein
PCJBFFDM_01339 0.0 - - - - - - - -
PCJBFFDM_01340 6.62e-198 thiM 2.7.1.50 - H ko:K00878 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
PCJBFFDM_01341 6.69e-172 thiE 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 - H ko:K03147,ko:K14153 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko00002,ko01000 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)
PCJBFFDM_01342 4.31e-194 thiD 2.7.1.49, 2.7.4.7 - H ko:K00941 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko00002,ko01000 Phosphomethylpyrimidine kinase
PCJBFFDM_01343 3.37e-79 - - - S - - - Thiamine-binding protein
PCJBFFDM_01344 5.33e-246 - - - K ko:K02529 - ko00000,ko03000 helix_turn _helix lactose operon repressor
PCJBFFDM_01345 1.54e-307 lacY - - P ko:K02532 - ko00000,ko02000 LacY proton/sugar symporter
PCJBFFDM_01346 0.0 fosC 3.2.1.26 GH32 G ko:K01193 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 32 family
PCJBFFDM_01347 1.43e-189 - - - P - - - Binding-protein-dependent transport system inner membrane component
PCJBFFDM_01348 4.99e-262 - - - P - - - NMT1/THI5 like
PCJBFFDM_01349 6.6e-294 - - - F - - - nucleoside hydrolase
PCJBFFDM_01350 8.46e-197 uppS 2.5.1.31, 2.5.1.86, 2.5.1.88 - H ko:K00806,ko:K14215,ko:K21273 ko00900,ko01110,map00900,map01110 ko00000,ko00001,ko01000,ko01006 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
PCJBFFDM_01351 4.14e-173 recO - - L ko:K03584 ko03440,map03440 ko00000,ko00001,ko03400 Involved in DNA repair and RecF pathway recombination
PCJBFFDM_01352 0.0 - - - I - - - acetylesterase activity
PCJBFFDM_01353 1.93e-286 ispG 1.17.7.1, 1.17.7.3 - I ko:K03526 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
PCJBFFDM_01354 2.8e-276 dxr 1.1.1.267 - I ko:K00099 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP)
PCJBFFDM_01355 0.0 - - - NU - - - Tfp pilus assembly protein FimV
PCJBFFDM_01357 3.68e-97 - - - S - - - Protein of unknown function (DUF3052)
PCJBFFDM_01358 3.48e-197 sdrC - - T ko:K07177 ko02024,map02024 ko00000,ko00001,ko01002 Belongs to the peptidase S16 family
PCJBFFDM_01359 0.0 - - - S - - - Zincin-like metallopeptidase
PCJBFFDM_01360 0.0 uvrD2 3.6.4.12 - L ko:K03657 ko03420,ko03430,map03420,map03430 ko00000,ko00001,ko01000,ko03400 DNA helicase
PCJBFFDM_01361 0.0 mphA - - S - - - Aminoglycoside phosphotransferase
PCJBFFDM_01362 4.61e-44 - - - S - - - Protein of unknown function (DUF3107)
PCJBFFDM_01363 4.79e-221 PPA1328 3.1.3.97, 3.1.4.57 - S ko:K07053,ko:K20859 ko00440,map00440 ko00000,ko00001,ko01000 DNA polymerase alpha chain like domain
PCJBFFDM_01364 6.1e-151 - - - S - - - Vitamin K epoxide reductase
PCJBFFDM_01365 1.8e-216 dapF 5.1.1.7 - E ko:K01778 ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine
PCJBFFDM_01366 1.07e-186 murI 5.1.1.3 - M ko:K01776 ko00471,ko01100,map00471,map01100 ko00000,ko00001,ko01000,ko01011 Provides the (R)-glutamate required for cell wall biosynthesis
PCJBFFDM_01367 7.53e-20 - - - S ko:K07001 - ko00000 lipid catabolic process
PCJBFFDM_01368 0.0 dppA - - E ko:K02035,ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter, substrate-binding protein, family 5
PCJBFFDM_01369 1.05e-226 iaaA 3.4.19.5 - E ko:K13051 - ko00000,ko01000,ko01002 Asparaginase
PCJBFFDM_01370 2.29e-204 - - - S - - - Patatin-like phospholipase
PCJBFFDM_01371 3.07e-239 - - - K - - - LysR substrate binding domain protein
PCJBFFDM_01372 7.79e-306 - 4.4.1.8 - E ko:K00842,ko:K14155 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 ko00000,ko00001,ko01000,ko01007 Aminotransferase, class I II
PCJBFFDM_01373 4.1e-160 - - - S ko:K06999 - ko00000 Phospholipase/Carboxylesterase
PCJBFFDM_01374 1.88e-62 cas2 - - L ko:K09951 - ko00000,ko02048 CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
PCJBFFDM_01375 1.01e-251 cas1 - - L ko:K15342 - ko00000,ko02048,ko03400 CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
PCJBFFDM_01376 1.99e-167 cas4 3.1.12.1 - L ko:K07464,ko:K15342 - ko00000,ko01000,ko02048,ko03400 Domain of unknown function DUF83
PCJBFFDM_01377 1.69e-196 - - - L ko:K19118 - ko00000,ko02048 CRISPR-associated protein Cas7
PCJBFFDM_01378 0.0 - - - M ko:K19117 - ko00000,ko02048 CRISPR-associated protein (Cas_Csd1)
PCJBFFDM_01379 2.61e-177 cas5d - - S ko:K19119 - ko00000,ko02048 CRISPR-associated protein (Cas_Cas5)
PCJBFFDM_01380 0.0 cas3 - - L ko:K07012 - ko00000,ko01000,ko02048 DEAD-like helicases superfamily
PCJBFFDM_01381 0.0 ileS 6.1.1.5 - J ko:K01870 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
PCJBFFDM_01382 0.0 gph - - G ko:K16209 - ko00000,ko02000 Psort location CytoplasmicMembrane, score 10.00
PCJBFFDM_01383 7.21e-237 - - - K ko:K02529 - ko00000,ko03000 Transcriptional regulator, LacI family
PCJBFFDM_01384 0.0 - - - V ko:K06147 - ko00000,ko02000 ABC transporter transmembrane region
PCJBFFDM_01385 0.0 - - - V ko:K06147 - ko00000,ko02000 ABC transporter, ATP-binding protein
PCJBFFDM_01386 1.65e-134 - - - K - - - MarR family
PCJBFFDM_01387 0.0 bglB 3.2.1.21 GH3 G ko:K05349 ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110 ko00000,ko00001,ko01000 Glycosyl hydrolase family 3 N-terminal domain protein
PCJBFFDM_01388 1.42e-137 - - - K - - - Bacterial regulatory proteins, tetR family
PCJBFFDM_01389 8.64e-259 glxK 2.7.1.165 - G ko:K00865 ko00260,ko00561,ko00630,ko01100,ko01120,ko01130,map00260,map00561,map00630,map01100,map01120,map01130 ko00000,ko00001,ko01000 Belongs to the glycerate kinase type-1 family
PCJBFFDM_01390 4.93e-231 - - - G - - - Transporter major facilitator family protein
PCJBFFDM_01391 0.0 - 3.2.1.40 - E ko:K05989 - ko00000,ko01000 Bacterial alpha-L-rhamnosidase C-terminal domain
PCJBFFDM_01392 2.32e-271 - - - U ko:K06610 - ko00000,ko02000 Sugar (and other) transporter
PCJBFFDM_01393 6.21e-147 - - - K ko:K02529 - ko00000,ko03000 Periplasmic binding protein domain
PCJBFFDM_01394 3.04e-18 - - - K - - - helix_turn_helix, mercury resistance
PCJBFFDM_01395 7.7e-277 - - - U ko:K08168,ko:K18926 - ko00000,ko00002,ko01504,ko02000 Major Facilitator Superfamily
PCJBFFDM_01396 0.0 bgl2 3.2.1.21 GH3 G ko:K05349 ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110 ko00000,ko00001,ko01000 Fibronectin type III-like domain
PCJBFFDM_01397 3.67e-138 - - - K - - - Bacterial regulatory proteins, tetR family
PCJBFFDM_01398 1.73e-307 - 3.2.1.4, 3.2.1.58 GH5,GH9 G ko:K01179,ko:K01210 ko00500,ko01100,map00500,map01100 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 5 (cellulase A) family
PCJBFFDM_01399 0.0 - 3.2.1.37 GH43 G ko:K01198 ko00520,ko01100,map00520,map01100 ko00000,ko00001,ko01000 Glycosyl hydrolases family 43
PCJBFFDM_01400 0.0 - 3.2.1.4, 3.2.1.58 GH5,GH9 G ko:K01179,ko:K01210 ko00500,ko01100,map00500,map01100 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 5 (cellulase A) family
PCJBFFDM_01401 0.0 - 3.2.1.55 GH51 G ko:K01209 ko00520,map00520 ko00000,ko00001,ko01000 Alpha-L-arabinofuranosidase C-terminus
PCJBFFDM_01402 6.41e-286 - - - G - - - MFS/sugar transport protein
PCJBFFDM_01403 4.55e-124 - - - K - - - transcriptional regulator
PCJBFFDM_01404 0.0 - 3.2.1.45 GH30 G ko:K01201 ko00511,ko00600,ko01100,ko04142,map00511,map00600,map01100,map04142 ko00000,ko00001,ko01000 Glycosyl hydrolase family 30 TIM-barrel domain
PCJBFFDM_01405 5.39e-308 - - - G - - - Transporter major facilitator family protein
PCJBFFDM_01406 1.99e-145 - - - K - - - Bacterial regulatory proteins, tetR family
PCJBFFDM_01407 0.0 - 3.2.1.23 - G ko:K12308 ko00052,map00052 ko00000,ko00001,ko01000 Beta-galactosidase trimerisation domain
PCJBFFDM_01408 5.5e-148 - - - K - - - Bacterial regulatory proteins, tetR family
PCJBFFDM_01409 0.0 egtA 6.3.2.2 - H ko:K01919 ko00270,ko00480,ko01100,map00270,map00480,map01100 ko00000,ko00001,ko00002,ko01000 Glutamate-cysteine ligase family 2(GCS2)
PCJBFFDM_01410 0.0 hgdC - - I - - - CoA enzyme activase uncharacterised domain (DUF2229)
PCJBFFDM_01411 2.93e-199 - - - I - - - BadF/BadG/BcrA/BcrD ATPase family
PCJBFFDM_01412 3.18e-179 nrdG 1.97.1.4 - O ko:K04068 - ko00000,ko01000 Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PCJBFFDM_01413 0.0 nrdD 1.1.98.6 - F ko:K21636 ko00230,ko00240,ko01100,map00230,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Anaerobic ribonucleoside-triphosphate reductase
PCJBFFDM_01414 3.66e-312 xseA 3.1.11.6 - L ko:K03601 ko03430,map03430 ko00000,ko00001,ko01000,ko03400 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PCJBFFDM_01415 3.42e-55 xseB 3.1.11.6 - L ko:K03602 ko03430,map03430 ko00000,ko00001,ko01000,ko03400 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PCJBFFDM_01417 1.38e-251 - - - S ko:K18353 ko01502,ko02020,map01502,map02020 ko00000,ko00001,ko00002,ko01504 Endonuclease/Exonuclease/phosphatase family
PCJBFFDM_01419 9.87e-47 VY92_01845 - - L ko:K07491 - ko00000 Transposase IS200 like
PCJBFFDM_01421 9.9e-129 tmp1 - - S - - - Domain of unknown function (DUF4391)
PCJBFFDM_01422 1.11e-214 ppx1 3.6.1.11, 3.6.1.40 - FP ko:K01524 ko00230,map00230 ko00000,ko00001,ko01000 Ppx/GppA phosphatase family
PCJBFFDM_01423 2.12e-296 aspB 2.6.1.1, 2.6.1.2, 2.6.1.66 - E ko:K00812,ko:K08969,ko:K14260 ko00220,ko00250,ko00270,ko00290,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00290,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Aminotransferase class-V
PCJBFFDM_01424 3.85e-92 vsr - - L ko:K07458 - ko00000,ko01000,ko03400 May nick specific sequences that contain T G mispairs resulting from m5C-deamination
PCJBFFDM_01425 2.63e-240 - - - S - - - Oxidoreductase family, NAD-binding Rossmann fold
PCJBFFDM_01426 0.0 - 3.6.4.12 - L ko:K03658 - ko00000,ko01000,ko03400 Psort location Cytoplasmic, score 8.87
PCJBFFDM_01427 5.11e-256 - - - V - - - Domain of unknown function (DUF3427)
PCJBFFDM_01428 2.94e-99 - - - - - - - -
PCJBFFDM_01429 8.64e-97 - - - S - - - Bacterial PH domain
PCJBFFDM_01430 4.93e-310 - - - S - - - zinc finger
PCJBFFDM_01432 0.0 - 3.2.1.24 GH38 G ko:K01191 ko00511,map00511 ko00000,ko00001,ko01000,ko04131 Alpha mannosidase, middle domain
PCJBFFDM_01433 7.02e-48 - 3.2.1.24 GH38 G ko:K01191 ko00511,map00511 ko00000,ko00001,ko01000,ko04131 Alpha mannosidase, middle domain
PCJBFFDM_01434 1.34e-15 - - - S - - - Unextendable partial coding region
PCJBFFDM_01436 5.12e-05 - - - - - - - -
PCJBFFDM_01437 0.0 - - - L - - - Psort location Cytoplasmic, score
PCJBFFDM_01438 6.67e-158 def 3.5.1.88 - J ko:K01462 - ko00000,ko01000 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
PCJBFFDM_01439 0.0 glmM 5.4.2.10 - G ko:K03431 ko00520,ko01100,ko01130,map00520,map01100,map01130 ko00000,ko00001,ko01000 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
PCJBFFDM_01440 0.0 pepN 3.4.11.2 - E ko:K01256,ko:K08776 ko00480,ko01100,map00480,map01100 ko00000,ko00001,ko01000,ko01002 Peptidase family M1 domain
PCJBFFDM_01441 0.0 rnj - - J ko:K12574 ko03018,map03018 ko00000,ko00001,ko01000,ko03019 An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PCJBFFDM_01442 1.67e-222 dapA 4.3.3.7 - E ko:K01714 ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
PCJBFFDM_01443 0.0 - 3.6.3.4, 3.6.3.54 - P ko:K01533,ko:K17686 ko01524,ko04016,map01524,map04016 ko00000,ko00001,ko01000 E1-E2 ATPase
PCJBFFDM_01444 6.79e-52 csoR - - S ko:K21600 - ko00000,ko03000 Metal-sensitive transcriptional repressor
PCJBFFDM_01445 1.3e-170 dapB 1.17.1.8 - E ko:K00215 ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
PCJBFFDM_01446 4.01e-314 - - - G - - - Major Facilitator Superfamily
PCJBFFDM_01447 0.0 uvrD2 3.6.4.12 - L ko:K03657 ko03420,ko03430,map03420,map03430 ko00000,ko00001,ko01000,ko03400 Belongs to the helicase family. UvrD subfamily
PCJBFFDM_01448 0.0 - - - L - - - PD-(D/E)XK nuclease superfamily
PCJBFFDM_01449 0.0 pknK 2.7.11.1 - KLT ko:K12132 - ko00000,ko01000,ko01001 Protein tyrosine kinase
PCJBFFDM_01450 0.0 - - - S - - - Fibronectin type 3 domain
PCJBFFDM_01451 8.99e-301 - - - S ko:K03924 - ko00000,ko01000 ATPase family associated with various cellular activities (AAA)
PCJBFFDM_01452 2.31e-282 - - - S - - - Protein of unknown function DUF58
PCJBFFDM_01453 0.0 - - - E - - - Transglutaminase-like superfamily
PCJBFFDM_01454 2.01e-209 - 3.1.3.16 - T ko:K20074 - ko00000,ko01000,ko01009 Sigma factor PP2C-like phosphatases
PCJBFFDM_01455 3.64e-147 - - - B - - - Belongs to the OprB family
PCJBFFDM_01456 1.82e-129 - - - T - - - Forkhead associated domain
PCJBFFDM_01457 0.0 rpoC 2.7.7.6 - K ko:K03046 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PCJBFFDM_01458 0.0 rpoB 2.7.7.6 - K ko:K03043 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PCJBFFDM_01459 1e-137 - - - - - - - -
PCJBFFDM_01460 8.97e-233 mutY - - L ko:K03575 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 FES
PCJBFFDM_01461 2.24e-162 spoU 2.1.1.207 - J ko:K03216 - ko00000,ko01000,ko03016 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
PCJBFFDM_01462 0.0 - - - S ko:K09157 - ko00000 UPF0210 protein
PCJBFFDM_01463 3.12e-56 - - - T ko:K07166 - ko00000 Belongs to the UPF0237 family
PCJBFFDM_01464 0.0 - 3.2.1.26 GH32 G ko:K01193 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 32 family
PCJBFFDM_01465 5.17e-250 - - - K ko:K02529 - ko00000,ko03000 helix_turn _helix lactose operon repressor
PCJBFFDM_01466 1.1e-158 - - - S - - - Protein of unknown function, DUF624
PCJBFFDM_01467 1.54e-219 - - - G ko:K17320 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
PCJBFFDM_01468 7.73e-230 - - - G ko:K17319 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
PCJBFFDM_01469 0.0 - - - G ko:K17318 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Bacterial extracellular solute-binding protein
PCJBFFDM_01470 6.59e-294 galK 2.7.1.6, 2.7.7.12 - G ko:K00849,ko:K00965 ko00052,ko00520,ko01100,ko04917,map00052,map00520,map01100,map04917 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the GHMP kinase family. GalK subfamily
PCJBFFDM_01471 0.0 galT 2.7.7.12 - C ko:K00965 ko00052,ko00520,ko01100,ko04917,map00052,map00520,map01100,map04917 ko00000,ko00001,ko00002,ko01000 Galactose-1-phosphate uridyl transferase, N-terminal domain
PCJBFFDM_01472 1.13e-181 - - - K - - - DeoR C terminal sensor domain
PCJBFFDM_01473 1.41e-289 pyrD 1.3.5.2, 1.3.98.1 - F ko:K00226,ko:K00254 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor
PCJBFFDM_01474 6.88e-279 namA - - C - - - NADH:flavin oxidoreductase / NADH oxidase family
PCJBFFDM_01475 0.0 pon1 - - M - - - Transglycosylase
PCJBFFDM_01476 3.02e-170 crp - - K ko:K10914 ko02020,ko02024,ko02025,ko02026,ko05111,map02020,map02024,map02025,map02026,map05111 ko00000,ko00001,ko03000 helix_turn_helix, cAMP Regulatory protein
PCJBFFDM_01477 2.12e-274 lplA 6.3.1.20 - H ko:K03800 ko00785,ko01100,map00785,map01100 ko00000,ko00001,ko01000 Biotin/lipoate A/B protein ligase family
PCJBFFDM_01478 9.27e-136 - - - J - - - TM2 domain
PCJBFFDM_01479 9.62e-247 leuB 1.1.1.85 - CE ko:K00052 ko00290,ko00660,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map01100,map01110,map01210,map01230 br01601,ko00000,ko00001,ko00002,ko01000 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate
PCJBFFDM_01480 0.0 ptrB 3.4.21.83 - E ko:K01354 ko05142,ko05143,map05142,map05143 ko00000,ko00001,ko01000,ko01002 Peptidase, S9A B C family, catalytic domain protein
PCJBFFDM_01481 1.07e-301 - - - S - - - Uncharacterized conserved protein (DUF2183)
PCJBFFDM_01482 1.36e-91 gcvH - - E ko:K02437 ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200 ko00000,ko00001,ko00002 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein
PCJBFFDM_01483 2.08e-265 nudC 3.6.1.22 - L ko:K03426 ko00760,ko01100,ko04146,map00760,map01100,map04146 ko00000,ko00001,ko01000 NADH pyrophosphatase zinc ribbon domain
PCJBFFDM_01484 2.63e-205 - - - I - - - Alpha/beta hydrolase family
PCJBFFDM_01485 1.95e-147 - - - F - - - Domain of unknown function (DUF4916)
PCJBFFDM_01486 4.09e-80 trxA 1.8.1.9 - O ko:K00384,ko:K03671 ko00450,ko04621,ko05418,map00450,map04621,map05418 ko00000,ko00001,ko01000,ko03110 Belongs to the thioredoxin family
PCJBFFDM_01487 6.77e-224 - - - S ko:K21688 - ko00000 G5
PCJBFFDM_01488 7.02e-114 - - - - - - - -
PCJBFFDM_01489 1.91e-93 - - - - - - - -
PCJBFFDM_01490 4.77e-38 - - - K - - - Cro/C1-type HTH DNA-binding domain
PCJBFFDM_01491 1.44e-98 - - - - - - - -
PCJBFFDM_01492 6.38e-125 etp 3.1.3.48 - T ko:K01104 - ko00000,ko01000 Low molecular weight phosphatase family
PCJBFFDM_01493 0.0 wcoI - - DM - - - Psort location CytoplasmicMembrane, score
PCJBFFDM_01494 0.0 - - - G - - - Belongs to the glycosyl hydrolase 31 family
PCJBFFDM_01495 5.43e-189 - - - P ko:K02026,ko:K10190 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
PCJBFFDM_01496 1.11e-208 - - - P ko:K02025 - ko00000,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
PCJBFFDM_01497 0.0 - - - G ko:K02027 - ko00000,ko00002,ko02000 Bacterial extracellular solute-binding protein
PCJBFFDM_01498 8.42e-237 - - - K - - - Psort location Cytoplasmic, score
PCJBFFDM_01499 1.14e-22 yccF - - S - - - Inner membrane component domain
PCJBFFDM_01500 0.0 - - - S - - - Psort location CytoplasmicMembrane, score 9.99
PCJBFFDM_01501 3.22e-104 - - - S ko:K07341 - ko00000,ko02048 Fic/DOC family
PCJBFFDM_01502 4.21e-116 - - - S - - - Protein of unknown function (DUF4065)
PCJBFFDM_01503 1.48e-10 - - - S - - - GIY-YIG catalytic domain
PCJBFFDM_01504 1.84e-59 - - - S - - - Bacteriophage abortive infection AbiH
PCJBFFDM_01505 0.0 - - - C - - - Domain of unknown function (DUF4365)
PCJBFFDM_01506 2.41e-149 - - - K - - - SIR2-like domain
PCJBFFDM_01507 2.86e-214 rfbA 2.7.7.24 - H ko:K00973 ko00521,ko00523,ko00525,ko01130,map00521,map00523,map00525,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
PCJBFFDM_01508 0.0 rfbD 1.1.1.133, 5.1.3.13 - M ko:K00067,ko:K01790 ko00521,ko00523,ko01130,map00521,map00523,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
PCJBFFDM_01509 1.96e-237 rfbB 4.2.1.46 - M ko:K01710 ko00521,ko00523,ko00525,ko01055,ko01130,map00521,map00523,map00525,map01055,map01130 ko00000,ko00001,ko00002,ko01000 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
PCJBFFDM_01510 8.14e-141 - 5.1.3.2 - GM ko:K01784 ko00052,ko00520,ko01100,map00052,map00520,map01100 ko00000,ko00001,ko00002,ko01000 3-beta hydroxysteroid dehydrogenase/isomerase family
PCJBFFDM_01511 1.45e-42 - - - GM - - - Bacterial transferase hexapeptide (six repeats)
PCJBFFDM_01512 6.8e-210 - - - M - - - Capsular polysaccharide synthesis protein
PCJBFFDM_01513 1.46e-234 - - - M - - - Glycosyl transferase 4-like domain
PCJBFFDM_01514 7.5e-150 - - - S - - - Polysaccharide biosynthesis protein
PCJBFFDM_01515 1.69e-28 - - - S - - - Protein conserved in bacteria
PCJBFFDM_01517 1.34e-64 - 2.3.1.30 - E ko:K00640 ko00270,ko00920,ko01100,ko01110,ko01120,ko01200,ko01230,ko05111,map00270,map00920,map01100,map01110,map01120,map01200,map01230,map05111 ko00000,ko00001,ko00002,ko01000 Hexapeptide repeat of succinyl-transferase
PCJBFFDM_01518 7.1e-139 - - - GM - - - GDP-mannose 4,6 dehydratase
PCJBFFDM_01519 1.44e-76 - - - M - - - Glycosyl transferases group 1
PCJBFFDM_01520 3.03e-254 ugd 1.1.1.22 - M ko:K00012 ko00040,ko00053,ko00520,ko01100,map00040,map00053,map00520,map01100 ko00000,ko00001,ko00002,ko01000 UDP binding domain
PCJBFFDM_01521 9.37e-204 - - - M - - - epimerase dehydratase
PCJBFFDM_01522 1.42e-224 - - - M - - - Domain of unknown function (DUF1972)
PCJBFFDM_01523 1.04e-51 - - - V - - - Abi-like protein
PCJBFFDM_01524 1.94e-241 - - - - - - - -
PCJBFFDM_01525 0.0 - - - M - - - Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
PCJBFFDM_01526 0.0 - - - H - - - Protein of unknown function (DUF4012)
PCJBFFDM_01527 2.25e-241 staP - - S ko:K18353 ko01502,ko02020,map01502,map02020 ko00000,ko00001,ko00002,ko01504 Endonuclease/Exonuclease/phosphatase family
PCJBFFDM_01528 1.46e-62 - - - - - - - -
PCJBFFDM_01529 0.0 - - - U - - - Drug resistance MFS transporter, drug H antiporter-2 family
PCJBFFDM_01530 3.01e-312 - - - T - - - Diguanylate cyclase (GGDEF) domain protein
PCJBFFDM_01531 3.49e-155 - - - L - - - Protein of unknown function (DUF1524)
PCJBFFDM_01532 2.98e-212 - - - S - - - Oxidoreductase, aldo keto reductase family protein
PCJBFFDM_01533 1.73e-305 mntH - - P ko:K03322 - ko00000,ko02000 H( )-stimulated, divalent metal cation uptake system
PCJBFFDM_01534 8.33e-254 - - - K - - - helix_turn _helix lactose operon repressor
PCJBFFDM_01535 0.0 bga1 3.2.1.23 - G ko:K12308 ko00052,map00052 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score 8.87
PCJBFFDM_01536 5.88e-232 - - - G ko:K02026 - ko00000,ko00002,ko02000 ABC transporter permease
PCJBFFDM_01537 3.4e-204 - - - G ko:K02025 - ko00000,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
PCJBFFDM_01538 0.0 - - - G ko:K02027 - ko00000,ko00002,ko02000 Bacterial extracellular solute-binding protein
PCJBFFDM_01539 7.32e-165 pdxT 4.3.3.6 - H ko:K08681 ko00750,map00750 ko00000,ko00001,ko01000 Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
PCJBFFDM_01540 6.62e-199 pdxS 4.3.3.6 - H ko:K06215 ko00750,map00750 ko00000,ko00001,ko01000 Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
PCJBFFDM_01541 0.0 - - - V ko:K06147,ko:K06148,ko:K16013 ko02010,map02010 ko00000,ko00001,ko02000 ABC transporter transmembrane region
PCJBFFDM_01542 0.0 fadD 6.2.1.3 - I ko:K01897 ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920 ko00000,ko00001,ko00002,ko01000,ko01004,ko04147 AMP-binding enzyme
PCJBFFDM_01543 0.0 araA 5.3.1.4 - G ko:K01804 ko00040,ko01100,map00040,map01100 ko00000,ko00001,ko01000 Catalyzes the conversion of L-arabinose to L-ribulose
PCJBFFDM_01544 1.1e-167 araD 5.1.3.4 - G ko:K03077 ko00040,ko00053,ko01100,ko01120,map00040,map00053,map01100,map01120 ko00000,ko00001,ko00002,ko01000 Class II Aldolase and Adducin N-terminal domain
PCJBFFDM_01545 0.0 araB - - G - - - FGGY family of carbohydrate kinases, C-terminal domain
PCJBFFDM_01546 6.03e-270 - - - K - - - helix_turn _helix lactose operon repressor
PCJBFFDM_01547 0.0 maf - - DF ko:K06287 - ko00000 Maf-like protein
PCJBFFDM_01548 1.35e-240 thrB 2.7.1.39 - E ko:K00872 ko00260,ko01100,ko01110,ko01120,ko01230,map00260,map01100,map01110,map01120,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
PCJBFFDM_01549 2.79e-306 hom 1.1.1.3, 2.7.2.4 - E ko:K00003,ko:K12524 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Homoserine dehydrogenase
PCJBFFDM_01550 0.0 lysA 4.1.1.20 - E ko:K01586 ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
PCJBFFDM_01551 0.0 argS 6.1.1.19 - J ko:K01887 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Arginyl-tRNA synthetase
PCJBFFDM_01552 0.0 - - - E ko:K16235 - ko00000,ko02000 amino acid
PCJBFFDM_01553 9.75e-85 psp1 3.5.99.10 - J ko:K09022 - ko00000,ko01000 Endoribonuclease L-PSP
PCJBFFDM_01555 1.41e-156 - - - S - - - CYTH
PCJBFFDM_01556 9.17e-217 ybbN - - O ko:K05838 - ko00000,ko03110 Tetratricopeptide repeat
PCJBFFDM_01557 9.79e-233 - - - - - - - -
PCJBFFDM_01558 2.16e-266 - - - - - - - -
PCJBFFDM_01559 2.27e-192 - 5.2.1.8 - M ko:K01802 - ko00000,ko01000 FKBP-type peptidyl-prolyl cis-trans isomerase
PCJBFFDM_01560 1.32e-156 nucS - - L ko:K07503 - ko00000,ko01000 Cleaves both 3' and 5' ssDNA extremities of branched DNA structures
PCJBFFDM_01561 2.73e-60 atpC - - C ko:K02114 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 Produces ATP from ADP in the presence of a proton gradient across the membrane
PCJBFFDM_01562 0.0 atpD 3.6.3.14 - C ko:K02112 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194,ko01000 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
PCJBFFDM_01563 5.5e-210 atpG - - C ko:K02115 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
PCJBFFDM_01564 0.0 atpA 3.6.3.14 - C ko:K02111 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194,ko01000 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
PCJBFFDM_01565 3.82e-190 atpH - - C ko:K02109,ko:K02113 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PCJBFFDM_01566 6.4e-93 atpF - - C ko:K02109 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
PCJBFFDM_01567 9.64e-42 atpE - - C ko:K02110 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PCJBFFDM_01568 6.89e-190 atpB - - C ko:K02108 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194,ko03110 it plays a direct role in the translocation of protons across the membrane
PCJBFFDM_01569 1.2e-264 metAA 2.3.1.46 - E ko:K00651 ko00270,ko00920,ko01100,ko01110,ko01230,map00270,map00920,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
PCJBFFDM_01571 0.0 frc 2.8.3.15, 2.8.3.16 - C ko:K07544,ko:K07749 ko00623,ko01100,ko01120,ko01220,map00623,map01100,map01120,map01220 ko00000,ko00001,ko00002,ko01000 Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
PCJBFFDM_01572 1.17e-247 - - - S ko:K07088 - ko00000 Membrane transport protein
PCJBFFDM_01573 0.0 oxc 4.1.1.8 - EH ko:K01577 ko00630,ko01100,map00630,map01100 ko00000,ko00001,ko01000 Thiamine pyrophosphate enzyme, central domain
PCJBFFDM_01574 3.8e-224 - - - M - - - LPXTG-motif cell wall anchor domain protein
PCJBFFDM_01575 0.0 glgE 2.4.99.16 GH13 G ko:K16147 ko00500,ko01100,map00500,map01100 ko00000,ko00001,ko01000 Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1- 4)- glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB
PCJBFFDM_01576 2.28e-118 ppa 3.6.1.1 - C ko:K01507 ko00190,map00190 ko00000,ko00001,ko01000 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
PCJBFFDM_01577 1.22e-127 mntP - - P - - - Probably functions as a manganese efflux pump
PCJBFFDM_01578 7.68e-174 - - - - - - - -
PCJBFFDM_01579 1.1e-172 glnR - - KT - - - Transcriptional regulatory protein, C terminal
PCJBFFDM_01580 9.55e-158 nth 4.2.99.18 - L ko:K10773 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
PCJBFFDM_01581 0.0 - - - E ko:K02035 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 Bacterial extracellular solute-binding proteins, family 5 Middle
PCJBFFDM_01582 0.0 valS 6.1.1.9 - J ko:K01873 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
PCJBFFDM_01583 0.0 - - - S - - - domain protein
PCJBFFDM_01584 6.95e-91 tyrA 5.4.99.5 - E ko:K04092 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Chorismate mutase type II
PCJBFFDM_01585 1.09e-104 lrp_3 - - K ko:K03719 - ko00000,ko03000,ko03036 helix_turn_helix ASNC type
PCJBFFDM_01586 0.0 rho - - K ko:K03628 ko03018,map03018 ko00000,ko00001,ko03019,ko03021 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
PCJBFFDM_01587 0.0 - - - H - - - Flavin containing amine oxidoreductase
PCJBFFDM_01588 1.43e-67 - - - S - - - Protein of unknown function (DUF2469)
PCJBFFDM_01589 1.4e-261 - - - J - - - Acetyltransferase (GNAT) domain
PCJBFFDM_01590 0.0 gatB 6.3.5.6, 6.3.5.7 - J ko:K02434 ko00970,ko01100,map00970,map01100 ko00000,ko00001,ko01000,ko03029 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PCJBFFDM_01591 0.0 gatA 6.3.5.6, 6.3.5.7 - F ko:K02433 ko00970,ko01100,map00970,map01100 ko00000,ko00001,ko01000,ko03029 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
PCJBFFDM_01592 1.35e-62 gatC 6.3.5.6, 6.3.5.7 - J ko:K02435 ko00970,ko01100,map00970,map01100 ko00000,ko00001,ko01000,ko03029 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PCJBFFDM_01593 1.46e-167 - - - K - - - Psort location Cytoplasmic, score
PCJBFFDM_01594 2.97e-167 trmH 2.1.1.34 - J ko:K00556 - ko00000,ko01000,ko03016 RNA methyltransferase TrmH family
PCJBFFDM_01595 4.93e-134 pyrE1 - - F - - - Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
PCJBFFDM_01596 2.8e-261 rmuC - - S ko:K09760 - ko00000 RmuC family
PCJBFFDM_01597 6.12e-184 - 3.6.3.54 - P ko:K17686 ko01524,ko04016,map01524,map04016 ko00000,ko00001,ko01000 Heavy metal translocating P-type atpase
PCJBFFDM_01598 0.0 clpB - - O ko:K03695,ko:K03696 ko01100,ko04213,map01100,map04213 ko00000,ko00001,ko03110 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
PCJBFFDM_01599 3.34e-210 - - - Q - - - Fumarylacetoacetate (FAA) hydrolase family
PCJBFFDM_01600 7.14e-190 - - - S ko:K06997 - ko00000 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
PCJBFFDM_01601 1.63e-104 - - - - - - - -
PCJBFFDM_01602 2.21e-267 gluQ 6.1.1.17 - J ko:K01885 ko00860,ko00970,ko01100,ko01110,ko01120,map00860,map00970,map01100,map01110,map01120 ko00000,ko00001,ko00002,ko01000,ko01007,ko02048,ko03016 Belongs to the class-I aminoacyl-tRNA synthetase family
PCJBFFDM_01603 7.96e-67 - - - M - - - Protein of unknown function (DUF3152)
PCJBFFDM_01605 1.1e-177 glpF - - U ko:K02440 - ko00000,ko02000 Belongs to the MIP aquaporin (TC 1.A.8) family
PCJBFFDM_01607 1.16e-92 rplI - - J ko:K02939 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds to the 23S rRNA
PCJBFFDM_01608 3.05e-48 rpsR - - J ko:K02963 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
PCJBFFDM_01609 5.64e-107 ssb - - L ko:K03111 ko03030,ko03430,ko03440,map03030,map03430,map03440 ko00000,ko00001,ko03029,ko03032,ko03400 Single-stranded DNA-binding protein
PCJBFFDM_01610 7.12e-62 rpsF - - J ko:K02990 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011,ko03029 Binds together with S18 to 16S ribosomal RNA
PCJBFFDM_01611 5.12e-242 prs 2.7.6.1 - F ko:K00948 ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PCJBFFDM_01612 1.37e-224 rbsK 2.7.1.15 - H ko:K00852 ko00030,map00030 ko00000,ko00001,ko01000 Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PCJBFFDM_01613 0.0 - - - EGP ko:K08168 - ko00000,ko00002,ko01504,ko02000 Major Facilitator Superfamily
PCJBFFDM_01614 1.58e-215 iunH2 3.2.2.1 - F ko:K01239 ko00230,ko00760,ko01100,map00230,map00760,map01100 ko00000,ko00001,ko01000 Inosine-uridine preferring nucleoside hydrolase
PCJBFFDM_01615 3.02e-253 - - - K ko:K02529 - ko00000,ko03000 helix_turn _helix lactose operon repressor
PCJBFFDM_01616 2.33e-85 - - - - - - - -
PCJBFFDM_01617 2.5e-258 rfbB 4.2.1.46 - M ko:K01710 ko00521,ko00523,ko00525,ko01055,ko01130,map00521,map00523,map00525,map01055,map01130 ko00000,ko00001,ko00002,ko01000 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
PCJBFFDM_01618 0.0 - - - M - - - Psort location CytoplasmicMembrane, score 9.26
PCJBFFDM_01619 1.19e-263 ugd 1.1.1.22 - M ko:K00012 ko00040,ko00053,ko00520,ko01100,map00040,map00053,map00520,map01100 ko00000,ko00001,ko00002,ko01000 UDP binding domain
PCJBFFDM_01620 0.0 - - - M - - - Glycosyl transferase family 8
PCJBFFDM_01621 1.82e-165 tagG - - U ko:K01992 - ko00000,ko00002,ko02000 Transport permease protein
PCJBFFDM_01622 1.22e-210 - - - GM ko:K01990 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
PCJBFFDM_01623 1.04e-33 - - - M - - - Glycosyltransferase like family 2
PCJBFFDM_01624 0.0 - - - M - - - Glycosyl transferase family 8
PCJBFFDM_01625 6.55e-15 - - - - - - - -
PCJBFFDM_01626 1.63e-265 - - - - - - - -
PCJBFFDM_01627 1.51e-145 - - - I - - - Acyltransferase family
PCJBFFDM_01628 5.87e-205 - - - M - - - Glycosyl transferase family 2
PCJBFFDM_01629 0.0 - - - M - - - Glycosyl hydrolases family 25
PCJBFFDM_01630 1.38e-53 - - - M - - - Glycosyl hydrolases family 25
PCJBFFDM_01631 0.0 - - - S ko:K07133 - ko00000 AAA domain
PCJBFFDM_01632 2.03e-107 - - - - - - - -
PCJBFFDM_01633 0.0 - 3.1.1.53 - E ko:K05970 - ko00000,ko01000 Carbohydrate esterase, sialic acid-specific acetylesterase
PCJBFFDM_01634 1.08e-76 - - - - - - - -
PCJBFFDM_01635 4.34e-104 - - - - - - - -
PCJBFFDM_01636 4.61e-222 - - - - - - - -
PCJBFFDM_01637 1.87e-175 - - - L ko:K07454 - ko00000 HNH endonuclease
PCJBFFDM_01639 6.29e-220 - - - S - - - Domain of unknown function (DUF4928)
PCJBFFDM_01640 5.58e-292 - 2.1.1.37 - L ko:K00558 ko00270,ko01100,ko05206,map00270,map01100,map05206 ko00000,ko00001,ko00002,ko01000,ko02048,ko03032,ko03036 Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family
PCJBFFDM_01642 2.78e-218 - - - T - - - AAA domain
PCJBFFDM_01643 4.73e-237 - - - T ko:K06919 - ko00000 regulation of circadian rhythm
PCJBFFDM_01644 1.4e-36 - - - - - - - -
PCJBFFDM_01645 2.81e-122 intA - - L - - - Phage integrase, N-terminal SAM-like domain
PCJBFFDM_01646 1.14e-76 intA - - L - - - Phage integrase, N-terminal SAM-like domain
PCJBFFDM_01648 1.32e-200 - - - EGP - - - Major Facilitator Superfamily
PCJBFFDM_01649 2.08e-42 yuxJ - - EGP - - - Major facilitator Superfamily
PCJBFFDM_01651 0.0 - - - S - - - Psort location CytoplasmicMembrane, score 9.99
PCJBFFDM_01652 4.62e-309 - - - V - - - ABC transporter permease
PCJBFFDM_01653 7.65e-235 - - - V ko:K02003 - ko00000,ko00002,ko02000 ABC transporter
PCJBFFDM_01654 7.79e-193 - - - T ko:K06950 - ko00000 HD domain
PCJBFFDM_01655 1.17e-214 - - - S - - - Glutamine amidotransferase domain
PCJBFFDM_01656 0.0 kup - - P ko:K03549 - ko00000,ko02000 Transport of potassium into the cell
PCJBFFDM_01657 1.4e-234 tatD - - L ko:K03424 - ko00000,ko01000 TatD related DNase
PCJBFFDM_01658 0.0 - - - G - - - Alpha-L-arabinofuranosidase C-terminus
PCJBFFDM_01659 2.66e-293 - - - G - - - Alpha galactosidase A
PCJBFFDM_01660 1.08e-289 - - - K - - - helix_turn _helix lactose operon repressor
PCJBFFDM_01661 0.0 - 3.2.1.22 - G ko:K07407 ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score 8.87
PCJBFFDM_01662 6.8e-162 - - - - - - - -
PCJBFFDM_01663 0.0 - - - V ko:K06147 - ko00000,ko02000 ABC transporter
PCJBFFDM_01664 0.0 - - - V ko:K06147 - ko00000,ko02000 ABC transporter
PCJBFFDM_01665 7.33e-272 - - - I - - - Hydrolase, alpha beta domain protein
PCJBFFDM_01666 0.000996 - - - S ko:K07133 - ko00000 Psort location Cytoplasmic, score
PCJBFFDM_01667 3.18e-197 - - - I - - - alpha/beta hydrolase fold
PCJBFFDM_01668 3.22e-296 - - - M - - - Protein of unknown function (DUF2961)
PCJBFFDM_01669 0.0 - - - M - - - probably involved in cell wall
PCJBFFDM_01670 0.0 - 3.2.1.14 GH18 S ko:K01183 ko00520,ko01100,map00520,map01100 ko00000,ko00001,ko01000 Carbohydrate binding domain
PCJBFFDM_01671 0.0 - - - T - - - Diguanylate cyclase, GGDEF domain
PCJBFFDM_01672 4.75e-78 - - - T - - - Diguanylate cyclase, GGDEF domain
PCJBFFDM_01673 9.38e-238 - - - K ko:K02529 - ko00000,ko03000 Transcriptional regulator, LacI family
PCJBFFDM_01674 2.52e-291 nagA 3.5.1.25 - G ko:K01443 ko00520,ko01130,map00520,map01130 ko00000,ko00001,ko01000 Amidohydrolase family
PCJBFFDM_01675 5.46e-192 nagB 3.5.99.6 - G ko:K02564 ko00520,ko01100,map00520,map01100 ko00000,ko00001,ko01000 Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
PCJBFFDM_01676 0.0 - - - G - - - Glycosyl hydrolase family 20, domain 2
PCJBFFDM_01677 3.94e-221 - 2.7.1.2 - GK ko:K00845 ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 ROK family
PCJBFFDM_01678 4.26e-73 - - - G ko:K02026 - ko00000,ko00002,ko02000 ABC transporter permease
PCJBFFDM_01679 9.67e-172 - - - G ko:K02025 - ko00000,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
PCJBFFDM_01680 8.19e-223 - - - G ko:K02026 - ko00000,ko00002,ko02000 ABC transporter permease
PCJBFFDM_01681 3.91e-267 - - - GK - - - ROK family
PCJBFFDM_01682 0.0 gph - - G ko:K16209 - ko00000,ko02000 Psort location CytoplasmicMembrane, score 10.00
PCJBFFDM_01683 0.0 - 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score 8.87
PCJBFFDM_01684 1.99e-175 - 3.5.99.2 - K ko:K03707 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko01000,ko03000 Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway. Thus, catalyzes the conversion of 4-amino-5-aminomethyl-2-methylpyrimidine to 4-amino- 5-hydroxymethyl-2-methylpyrimidine (HMP)
PCJBFFDM_01686 0.0 lacZ3 - - G - - - Belongs to the glycosyl hydrolase 2 family
PCJBFFDM_01687 0.0 metG 6.1.1.10 - J ko:K01874 ko00450,ko00970,map00450,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
PCJBFFDM_01688 7.95e-139 - - - - - - - -
PCJBFFDM_01690 1.04e-245 rsmI 2.1.1.198 - H ko:K07056 - ko00000,ko01000,ko03009 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
PCJBFFDM_01691 9.63e-22 - 3.2.1.78 GH26 G ko:K01218 ko00051,ko02024,map00051,map02024 ko00000,ko00001,ko01000 Glycosyl hydrolase family 26
PCJBFFDM_01692 1.1e-161 dedA1 - - S ko:K03975 - ko00000 SNARE associated Golgi protein
PCJBFFDM_01694 4.86e-166 - - - S - - - HAD hydrolase, family IA, variant 3
PCJBFFDM_01695 6.08e-63 - - - - - - - -
PCJBFFDM_01696 3.11e-144 hspR - - K ko:K13640 - ko00000,ko03000 transcriptional regulator, MerR family
PCJBFFDM_01697 1.14e-232 dnaJ - - O ko:K03686,ko:K05516 - ko00000,ko03029,ko03036,ko03110 DnaJ molecular chaperone homology domain
PCJBFFDM_01698 4.47e-104 grpE - - O ko:K03687 - ko00000,ko03029,ko03110 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
PCJBFFDM_01699 0.0 dnaK - - O ko:K04043 ko03018,ko04212,ko05152,map03018,map04212,map05152 ko00000,ko00001,ko03019,ko03029,ko03110,ko04147 Heat shock 70 kDa protein
PCJBFFDM_01700 5.66e-187 - - - S - - - Mitochondrial biogenesis AIM24
PCJBFFDM_01701 1.13e-68 strK 3.1.3.1, 3.1.3.39 - P ko:K01077,ko:K04342 ko00521,ko00730,ko00790,ko01100,ko01130,ko02020,map00521,map00730,map00790,map01100,map01130,map02020 ko00000,ko00001,ko00002,ko00537,ko01000,ko04147 Alkaline phosphatase homologues
PCJBFFDM_01702 4.48e-178 - - - S ko:K07090 - ko00000 membrane transporter protein
PCJBFFDM_01703 8.02e-77 - 3.4.22.70 - M ko:K07284 - ko00000,ko01000,ko01002,ko01011 Sortase family
PCJBFFDM_01704 1.07e-93 - 3.4.22.70 - M ko:K07284 - ko00000,ko01000,ko01002,ko01011 Sortase family
PCJBFFDM_01705 5.79e-246 - - - K - - - Psort location Cytoplasmic, score
PCJBFFDM_01706 2.24e-166 traX - - S - - - TraX protein
PCJBFFDM_01707 8.69e-186 - - - S ko:K07025 - ko00000 HAD-hyrolase-like
PCJBFFDM_01708 0.0 apuB 3.2.1.41, 3.2.1.68 CBM48,GH13 G ko:K01200,ko:K01214 ko00500,ko01100,ko01110,map00500,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Belongs to the glycosyl hydrolase 13 family
PCJBFFDM_01709 0.0 malQ 2.4.1.25 GH77 G ko:K00705 ko00500,ko01100,map00500,map01100 ko00000,ko00001,ko01000 4-alpha-glucanotransferase
PCJBFFDM_01710 3.22e-18 - - - S - - - Transposon-encoded protein TnpV
PCJBFFDM_01711 1.16e-140 pepE 3.4.13.21 - E ko:K05995 - ko00000,ko01000,ko01002 Peptidase family S51
PCJBFFDM_01712 8.49e-138 - - - S - - - Protein of unknown function, DUF624
PCJBFFDM_01713 2.6e-195 - - - G ko:K02026,ko:K10119 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter permease
PCJBFFDM_01714 2.23e-198 msmF - - G ko:K10118 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
PCJBFFDM_01715 1.39e-234 - - - K - - - Psort location Cytoplasmic, score
PCJBFFDM_01716 8.4e-237 - - - K - - - Periplasmic binding protein-like domain
PCJBFFDM_01717 0.0 - 3.2.1.20 GH31 G ko:K01187 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 Alpha-amylase domain
PCJBFFDM_01718 0.0 amyE - - G ko:K10117 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Bacterial extracellular solute-binding protein
PCJBFFDM_01719 4.88e-177 gpm2 3.1.3.73 - G ko:K02226 ko00860,ko01100,map00860,map01100 ko00000,ko00001,ko00002,ko01000 Phosphoglycerate mutase family
PCJBFFDM_01720 2.94e-80 - - - S - - - Protein of unknown function (DUF4235)
PCJBFFDM_01721 2.87e-71 nfrA - - C - - - Nitroreductase family
PCJBFFDM_01722 2e-88 nfrA - - C - - - Nitroreductase family
PCJBFFDM_01723 1.66e-59 - - - - - - - -
PCJBFFDM_01724 2.83e-16 - - - S - - - Unextendable partial coding region
PCJBFFDM_01726 1.99e-109 - - - K - - - Cro/C1-type HTH DNA-binding domain
PCJBFFDM_01727 0.0 pacL2 3.6.3.8 - P ko:K01537 - ko00000,ko01000 Cation transporter/ATPase, N-terminus
PCJBFFDM_01728 0.0 - 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score 8.87
PCJBFFDM_01729 1.65e-193 - - - S - - - Short repeat of unknown function (DUF308)
PCJBFFDM_01730 5.55e-66 - - - S - - - Antitoxin component of a toxin-antitoxin (TA) module
PCJBFFDM_01731 1.44e-72 - - - DJ ko:K06218 - ko00000,ko02048 Addiction module toxin, RelE StbE family
PCJBFFDM_01732 6.49e-19 - - - S - - - Psort location Extracellular, score 8.82
PCJBFFDM_01733 2.35e-295 - - - EGP - - - Transmembrane secretion effector
PCJBFFDM_01734 1.48e-223 rlmB 2.1.1.185 - J ko:K03218 - ko00000,ko01000,ko03009 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PCJBFFDM_01735 0.0 - - - KLT - - - Domain of unknown function (DUF4032)
PCJBFFDM_01736 1.26e-268 ugpC - - E ko:K10112 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Belongs to the ABC transporter superfamily
PCJBFFDM_01737 2.51e-168 - - - K - - - LytTr DNA-binding domain
PCJBFFDM_01738 2.79e-316 - - - T - - - GHKL domain
PCJBFFDM_01739 1.81e-133 - - - - - - - -
PCJBFFDM_01740 1.19e-273 - - - P ko:K03281 - ko00000 Voltage gated chloride channel
PCJBFFDM_01741 1.91e-63 - - - S ko:K07133 - ko00000 Psort location Cytoplasmic, score
PCJBFFDM_01742 6.29e-178 - - - - - - - -
PCJBFFDM_01743 3.7e-214 - 3.4.22.70 - M ko:K07284 - ko00000,ko01000,ko01002,ko01011 Sortase family
PCJBFFDM_01744 0.0 - - - M - - - LPXTG-motif cell wall anchor domain protein
PCJBFFDM_01745 0.0 - - - S - - - LPXTG-motif cell wall anchor domain protein
PCJBFFDM_01746 5.41e-127 - - - S - - - GtrA-like protein
PCJBFFDM_01747 0.0 - 3.2.1.21 GH3 G ko:K05349 ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110 ko00000,ko00001,ko01000 Glycosyl hydrolase family 3 N-terminal domain protein
PCJBFFDM_01748 2.47e-156 - 3.6.1.27 - I ko:K19302 ko00550,map00550 ko00000,ko00001,ko01000,ko01011 Psort location CytoplasmicMembrane, score
PCJBFFDM_01749 2.55e-106 ypeA 2.3.1.1 - K ko:K22477 ko00220,ko01210,ko01230,map00220,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score 8.87
PCJBFFDM_01750 1.84e-147 vex - - V ko:K02003 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
PCJBFFDM_01751 7.08e-273 - - - V ko:K02004 - ko00000,ko00002,ko02000 Efflux ABC transporter, permease protein
PCJBFFDM_01752 1.89e-305 - - - V ko:K02004 - ko00000,ko00002,ko02000 ABC transporter permease
PCJBFFDM_01753 1.15e-41 gph - - G ko:K16209 - ko00000,ko02000 Psort location CytoplasmicMembrane, score 10.00
PCJBFFDM_01754 1.35e-54 - 3.6.4.12 - K ko:K03655 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Putative ATP-dependent DNA helicase recG C-terminal
PCJBFFDM_01755 7.74e-296 - - - EGP ko:K08177 - ko00000,ko02000 Major Facilitator Superfamily
PCJBFFDM_01756 0.0 - 1.8.1.9 - C ko:K00384 ko00450,map00450 ko00000,ko00001,ko01000 Thioredoxin domain
PCJBFFDM_01757 1.22e-138 ahpC 1.11.1.15 - O ko:K03386 ko04214,map04214 ko00000,ko00001,ko01000,ko04147 C-terminal domain of 1-Cys peroxiredoxin
PCJBFFDM_01758 3.94e-16 - - - S - - - Unextendable partial coding region
PCJBFFDM_01760 8.22e-110 - - - I - - - alpha/beta hydrolase fold
PCJBFFDM_01762 1.57e-186 cobB2 - - K ko:K12410 - ko00000,ko01000 Sir2 family
PCJBFFDM_01763 1.76e-296 ilvA 4.3.1.19 - E ko:K01754 ko00260,ko00290,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00290,map01100,map01110,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Pyridoxal-phosphate dependent enzyme
PCJBFFDM_01764 0.0 - 3.2.1.10 GH13 G ko:K01182 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 Alpha amylase, catalytic domain protein
PCJBFFDM_01765 1.51e-198 - - - G ko:K10119 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
PCJBFFDM_01766 1.01e-203 - - - G ko:K10118 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
PCJBFFDM_01767 4.11e-311 - - - G ko:K10117 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Bacterial extracellular solute-binding protein
PCJBFFDM_01768 5.18e-295 - - - GK - - - ROK family
PCJBFFDM_01769 0.0 - 3.2.1.22 - G ko:K07407 ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603 ko00000,ko00001,ko01000 Glycosyl hydrolase family 36 N-terminal domain
PCJBFFDM_01770 2.32e-100 tadA 3.5.4.1, 3.5.4.33 - FJ ko:K01485,ko:K11991 ko00240,ko00330,ko01100,map00240,map00330,map01100 ko00000,ko00001,ko01000,ko03016 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
PCJBFFDM_01771 0.0 nhaP - - P ko:K03316 - ko00000 Sodium/hydrogen exchanger family
PCJBFFDM_01772 4.9e-198 - - - S ko:K06999 - ko00000 Phospholipase/Carboxylesterase
PCJBFFDM_01773 2.99e-144 dcd 3.5.4.13 - F ko:K01494 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the dCTP deaminase family
PCJBFFDM_01774 4.65e-35 - - - - - - - -
PCJBFFDM_01776 0.0 - 3.2.1.21 GH3 G ko:K05349 ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110 ko00000,ko00001,ko01000 Fibronectin type III-like domain
PCJBFFDM_01777 0.0 - - - KLT - - - Protein tyrosine kinase
PCJBFFDM_01778 6.32e-211 - - - O - - - Thioredoxin
PCJBFFDM_01780 5.75e-205 rpfB - - S ko:K21688 - ko00000 G5
PCJBFFDM_01781 1.22e-219 ksgA 2.1.1.182 - J ko:K02528 - ko00000,ko01000,ko03009 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
PCJBFFDM_01782 4.39e-214 ispE 2.7.1.148 - F ko:K00919 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
PCJBFFDM_01783 8.42e-142 - - - S - - - LytR cell envelope-related transcriptional attenuator
PCJBFFDM_01784 0.0 pcnA 2.7.7.19, 2.7.7.72 - J ko:K00970,ko:K00974 ko03013,ko03018,map03013,map03018 ko00000,ko00001,ko01000,ko03016,ko03019 Probable RNA and SrmB- binding site of polymerase A
PCJBFFDM_01785 6.34e-156 mutT4 - - L - - - Belongs to the Nudix hydrolase family
PCJBFFDM_01786 0.0 - - - M - - - Conserved repeat domain
PCJBFFDM_01787 0.0 mviN - - KLT ko:K03980 - ko00000,ko01011,ko02000 MviN-like protein
PCJBFFDM_01788 0.0 - - - KLT ko:K03980 - ko00000,ko01011,ko02000 MviN-like protein
PCJBFFDM_01789 6.29e-17 - - - S ko:K07133 - ko00000 Domain of unknown function (DUF4143)
PCJBFFDM_01790 1.85e-156 - - - S - - - 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C)
PCJBFFDM_01792 5.61e-20 - - - S - - - Psort location Extracellular, score 8.82
PCJBFFDM_01793 6.95e-231 trxB 1.8.1.9 - C ko:K00384 ko00450,map00450 ko00000,ko00001,ko01000 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
PCJBFFDM_01794 8.92e-280 parB - - K ko:K03497 - ko00000,ko03000,ko03036,ko04812 Belongs to the ParB family
PCJBFFDM_01795 3.04e-221 parA - - D ko:K03496 - ko00000,ko03036,ko04812 CobQ CobB MinD ParA nucleotide binding domain protein
PCJBFFDM_01796 8.05e-169 rsmG 2.1.1.170 - J ko:K03501 - ko00000,ko01000,ko03009,ko03036 Specifically methylates the N7 position of a guanine in 16S rRNA
PCJBFFDM_01797 1.06e-117 jag - - S ko:K06346 - ko00000 Putative single-stranded nucleic acids-binding domain
PCJBFFDM_01798 2.26e-244 yidC - - U ko:K03217 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044,ko03029 Membrane protein insertase, YidC Oxa1 family
PCJBFFDM_01799 1.39e-57 rnpA 3.1.26.5 - J ko:K03536 - ko00000,ko01000,ko03016 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
PCJBFFDM_01800 2.68e-19 rpmH - - J ko:K02914 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL34 family

eggNOG-mapper v2.1.12 (Database: eggNOG v5.0.2, Mar. 2021 release)