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ORF_ID	e_value	Gene_name	EC_number	CAZy	COGs	KEGG_ko	KEGG_Pathway	BRITE	Description
CMLPILML_00001	9.37e-255	ychF	-	-	J	ko:K06942	-	ko00000,ko03009	ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
CMLPILML_00002	3.82e-191	-	-	-	S	-	-	-	Protein of unknown function (DUF1129)
CMLPILML_00003	0.0	-	-	-	V	ko:K06147,ko:K06148	-	ko00000,ko02000	ABC transporter, ATP-binding protein
CMLPILML_00004	8.86e-100	ndvA	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter
CMLPILML_00005	1.28e-197	noc	-	-	K	ko:K03497	-	ko00000,ko03000,ko03036,ko04812	Belongs to the ParB family
CMLPILML_00006	7.1e-177	soj	-	-	D	ko:K03496	-	ko00000,ko03036,ko04812	Sporulation initiation inhibitor
CMLPILML_00007	9.01e-198	spo0J	-	-	K	ko:K03497	-	ko00000,ko03000,ko03036,ko04812	Belongs to the ParB family
CMLPILML_00008	2.58e-58	yyzM	-	-	S	-	-	-	Bacterial protein of unknown function (DUF951)
CMLPILML_00009	1.09e-79	-	-	-	-	-	-	-	-
CMLPILML_00037	0.0	ltaS	2.7.8.20	-	M	ko:K19005	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
CMLPILML_00038	2.64e-154	cpoA	2.4.1.208	GT4	M	ko:K13677,ko:K13678	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000,ko01003	Glycosyltransferase, group 1 family protein
CMLPILML_00039	3.15e-232	mprF	-	-	S	ko:K07027	-	ko00000,ko02000	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
CMLPILML_00042	0.0	-	-	-	KL	-	-	-	domain protein
CMLPILML_00043	2.2e-195	-	-	-	-	-	-	-	-
CMLPILML_00044	0.0	-	2.1.1.72	-	V	ko:K03427	-	ko00000,ko01000,ko02048	type I restriction-modification system
CMLPILML_00045	2.86e-287	-	3.1.21.3	-	V	ko:K01154	-	ko00000,ko01000,ko02048	Type I restriction modification DNA specificity domain
CMLPILML_00046	2.91e-229	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
CMLPILML_00047	5.39e-152	-	-	-	V	-	-	-	Type I restriction modification DNA specificity domain
CMLPILML_00048	0.0	-	3.1.21.3	-	V	ko:K01153	-	ko00000,ko01000,ko02048	EcoEI R protein C-terminal
CMLPILML_00049	0.0	-	-	-	S	-	-	-	Protein of unknown function DUF262
CMLPILML_00050	0.0	-	-	-	C	-	-	-	FMN_bind
CMLPILML_00051	7.96e-135	-	-	-	-	-	-	-	-
CMLPILML_00052	3.51e-142	-	-	-	-	-	-	-	-
CMLPILML_00053	8.13e-207	XK27_10395	-	-	S	-	-	-	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CMLPILML_00054	1.66e-287	cca	2.7.7.72	-	J	ko:K00974	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
CMLPILML_00055	1.38e-147	hlyIII	-	-	S	ko:K11068	-	ko00000,ko02042	protein, hemolysin III
CMLPILML_00056	2.31e-196	degV3	-	-	S	-	-	-	Uncharacterised protein, DegV family COG1307
CMLPILML_00057	3.74e-48	yozE	-	-	S	-	-	-	Belongs to the UPF0346 family
CMLPILML_00058	0.0	ctpA	3.4.21.102	-	M	ko:K03797	-	ko00000,ko01000,ko01002	Belongs to the peptidase S41A family
CMLPILML_00059	4.91e-204	rbgA	-	-	S	ko:K14540	-	ko00000,ko03009	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
CMLPILML_00060	7.68e-173	rnhB	3.1.26.4	-	L	ko:K03470	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
CMLPILML_00061	1.3e-200	dprA	-	-	LU	ko:K04096	-	ko00000	DNA protecting protein DprA
CMLPILML_00062	0.0	topA	5.99.1.2	-	L	ko:K03168	-	ko00000,ko01000,ko03032,ko03400	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
CMLPILML_00063	1.9e-316	trmFO	2.1.1.74	-	J	ko:K04094	-	ko00000,ko01000,ko03016,ko03036	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
CMLPILML_00064	1.09e-221	xerC	-	-	D	ko:K03733,ko:K04763	-	ko00000,ko03036	Phage integrase, N-terminal SAM-like domain
CMLPILML_00065	7.75e-115	hslV	3.4.25.2	-	O	ko:K01419	-	ko00000,ko01000,ko01002	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
CMLPILML_00066	0.0	hslU	-	-	O	ko:K03667	-	ko00000,ko03110	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
CMLPILML_00067	3.03e-231	lacX	5.1.3.3	-	G	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Aldose 1-epimerase
CMLPILML_00068	1.19e-134	-	-	-	K	-	-	-	LysR substrate binding domain
CMLPILML_00069	1.17e-129	-	-	-	S	ko:K07038	-	ko00000	LexA-binding, inner membrane-associated putative hydrolase
CMLPILML_00071	6.86e-92	-	-	-	-	-	-	-	-
CMLPILML_00072	1.09e-230	-	-	-	S	-	-	-	Conserved hypothetical protein 698
CMLPILML_00073	5.9e-94	-	-	-	K	-	-	-	Transcriptional regulator
CMLPILML_00074	6.05e-69	-	-	-	-	-	-	-	-
CMLPILML_00075	3.75e-57	-	-	-	-	-	-	-	-
CMLPILML_00076	5.57e-55	-	-	-	K	ko:K15773	-	ko00000,ko02048,ko03000	peptidyl-tyrosine sulfation
CMLPILML_00077	2.08e-179	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
CMLPILML_00078	3.29e-146	ybbL	-	-	S	ko:K02068	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
CMLPILML_00079	2.18e-169	ybbM	-	-	S	ko:K02069	-	ko00000,ko00002,ko02000	Uncharacterised protein family (UPF0014)
CMLPILML_00080	6.43e-127	-	2.3.1.128	-	K	ko:K03790	-	ko00000,ko01000,ko03009	Acetyltransferase (GNAT) domain
CMLPILML_00081	3.18e-87	-	-	-	S	-	-	-	Protein of unknown function (DUF3021)
CMLPILML_00082	1.27e-99	-	-	-	K	-	-	-	LytTr DNA-binding domain
CMLPILML_00083	1.21e-144	ybbB	-	-	S	-	-	-	Protein of unknown function (DUF1211)
CMLPILML_00084	0.0	-	-	-	S	-	-	-	domain, Protein
CMLPILML_00086	0.0	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
CMLPILML_00087	0.0	-	-	-	M	-	-	-	domain protein
CMLPILML_00089	0.0	-	-	-	-	-	-	-	-
CMLPILML_00090	5.55e-143	-	-	-	S	ko:K07025	-	ko00000	Haloacid dehalogenase-like hydrolase
CMLPILML_00091	2.64e-154	yjhB	3.6.1.13	-	F	ko:K01515	ko00230,map00230	ko00000,ko00001,ko01000	NUDIX domain
CMLPILML_00092	7.35e-103	-	-	-	S	ko:K11621	ko02020,map02020	ko00000,ko00001	Putative adhesin
CMLPILML_00093	8.75e-317	brnQ	-	-	U	ko:K03311	-	ko00000	Component of the transport system for branched-chain amino acids
CMLPILML_00094	1.55e-17	tnpA1	-	-	L	-	-	-	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
CMLPILML_00095	9.19e-21	-	-	-	L	-	-	-	Plasmid pRiA4b ORF-3-like protein
CMLPILML_00096	5.79e-90	-	-	-	K	-	-	-	HxlR family
CMLPILML_00097	2.79e-64	-	-	-	-	-	-	-	-
CMLPILML_00098	1.73e-294	dgoD	4.2.1.6, 4.2.1.8	-	M	ko:K01684,ko:K08323	ko00040,ko00052,ko01100,ko01120,map00040,map00052,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Mandelate racemase muconate lactonizing enzyme
CMLPILML_00099	1.83e-15	dhrS4	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Oxidoreductase, short chain dehydrogenase reductase family protein
CMLPILML_00100	1.13e-98	dhrS4	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Oxidoreductase, short chain dehydrogenase reductase family protein
CMLPILML_00101	0.0	-	-	-	P	ko:K06147,ko:K06148	-	ko00000,ko02000	ABC transporter
CMLPILML_00102	0.0	-	-	-	V	ko:K06147,ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
CMLPILML_00103	3.13e-55	-	-	-	S	-	-	-	Cupin domain
CMLPILML_00104	1.41e-242	cbh	3.5.1.24	-	M	ko:K01442	ko00120,ko00121,ko01100,map00120,map00121,map01100	ko00000,ko00001,ko01000	Linear amide C-N hydrolase, choloylglycine hydrolase family protein
CMLPILML_00105	4.45e-42	-	3.2.1.31	-	G	ko:K01195	ko00040,ko00531,ko00860,ko00944,ko00983,ko01100,ko01110,ko04142,map00040,map00531,map00860,map00944,map00983,map01100,map01110,map04142	ko00000,ko00001,ko00002,ko01000	Belongs to the glycosyl hydrolase 2 family
CMLPILML_00106	2.4e-41	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
CMLPILML_00107	0.0	mgtA	3.6.3.2	-	P	ko:K01531	-	ko00000,ko01000	COG0474 Cation transport ATPase
CMLPILML_00108	5.26e-157	lmrA	3.6.3.44	-	V	ko:K02021,ko:K18104	ko01501,ko02010,map01501,map02010	ko00000,ko00001,ko00002,ko01000,ko01504,ko02000	ABC transporter
CMLPILML_00109	6.96e-201	-	-	-	C	-	-	-	Aldo keto reductase
CMLPILML_00111	1.24e-129	-	-	-	K	-	-	-	Transcriptional regulator C-terminal region
CMLPILML_00112	4.43e-296	-	-	-	E	-	-	-	Alpha/beta hydrolase of unknown function (DUF1100)
CMLPILML_00113	6.65e-152	-	-	-	GM	-	-	-	NAD(P)H-binding
CMLPILML_00114	8.01e-276	mdt(A)	-	-	EGP	ko:K08217	-	br01600,ko00000,ko01504,ko02000	Transmembrane secretion effector
CMLPILML_00115	2.78e-80	-	-	-	S	ko:K07090	-	ko00000	Sulfite exporter TauE/SafE
CMLPILML_00116	2.7e-43	-	-	-	G	ko:K03292	-	ko00000	Major facilitator Superfamily
CMLPILML_00117	0.0	npr	1.11.1.1	-	C	ko:K05910	-	ko00000,ko01000	NADH oxidase
CMLPILML_00118	5.09e-82	ribH	2.5.1.78	-	H	ko:K00794	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin
CMLPILML_00119	4.3e-38	ribBA	3.5.4.25, 4.1.99.12	-	H	ko:K14652	ko00740,ko00790,ko01100,ko01110,map00740,map00790,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate
CMLPILML_00120	9.67e-222	yobV3	-	-	K	-	-	-	WYL domain
CMLPILML_00121	5.89e-90	-	-	-	S	-	-	-	pyridoxamine 5-phosphate
CMLPILML_00122	2.06e-67	-	-	-	K	-	-	-	LytTr DNA-binding domain
CMLPILML_00123	0.0	cadA	3.6.3.3, 3.6.3.5	-	P	ko:K01534	-	ko00000,ko01000	E1-E2 ATPase
CMLPILML_00124	9.51e-47	-	-	-	C	-	-	-	Heavy-metal-associated domain
CMLPILML_00125	1.13e-125	dpsB	-	-	P	-	-	-	Belongs to the Dps family
CMLPILML_00126	1.24e-144	fnr	-	-	K	ko:K21562	-	ko00000,ko03000	Transcriptional regulator, Crp Fnr family
CMLPILML_00127	2.34e-124	-	-	-	K	-	-	-	Acetyltransferase (GNAT) family
CMLPILML_00128	7e-114	glxR	1.1.1.31	-	I	ko:K00020	ko00280,ko01100,map00280,map01100	ko00000,ko00001,ko01000	Dehydrogenase
CMLPILML_00129	2.69e-63	glxR	1.1.1.31	-	I	ko:K00020	ko00280,ko01100,map00280,map01100	ko00000,ko00001,ko01000	Dehydrogenase
CMLPILML_00130	1.4e-99	-	-	-	K	-	-	-	Transcriptional regulator
CMLPILML_00131	5.33e-90	ogt	2.1.1.63	-	L	ko:K00567,ko:K07443	-	ko00000,ko01000,ko03400	methylated-DNA-[protein]-cysteine S-methyltransferase activity
CMLPILML_00132	2.95e-112	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
CMLPILML_00133	1.46e-161	-	-	-	S	-	-	-	Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
CMLPILML_00134	1.43e-312	-	-	-	L	ko:K07478	-	ko00000	AAA C-terminal domain
CMLPILML_00135	2.63e-43	-	-	-	S	ko:K07045	-	ko00000	Amidohydrolase
CMLPILML_00136	6.34e-135	-	-	-	S	ko:K07045	-	ko00000	Amidohydrolase
CMLPILML_00137	7.15e-155	ybhL	-	-	S	ko:K06890	-	ko00000	Belongs to the BI1 family
CMLPILML_00138	3.31e-18	-	-	-	C	-	-	-	Aldo/keto reductase family
CMLPILML_00139	6.98e-94	-	-	-	C	-	-	-	Aldo/keto reductase family
CMLPILML_00140	1.53e-213	akr5f	1.1.1.346	-	S	ko:K06221	-	ko00000,ko01000	reductase
CMLPILML_00141	2.95e-160	nth2	-	-	L	ko:K07457	-	ko00000	Base excision DNA repair protein, HhH-GPD family
CMLPILML_00142	1.4e-148	maa3	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	transferase hexapeptide repeat
CMLPILML_00143	5.23e-151	plsY	2.3.1.15	-	I	ko:K08591	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
CMLPILML_00144	0.0	parE	-	-	L	ko:K02622	-	ko00000,ko01000,ko02048,ko03032,ko03036	Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
CMLPILML_00145	0.0	parC	-	-	L	ko:K02621	-	ko00000,ko01000,ko02048,ko03032,ko03036	Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
CMLPILML_00146	2.92e-231	-	-	-	K	-	-	-	Transcriptional regulator
CMLPILML_00147	3.5e-220	ppaC	3.6.1.1	-	C	ko:K15986	ko00190,map00190	ko00000,ko00001,ko01000	inorganic pyrophosphatase
CMLPILML_00148	0.0	recQ	3.6.4.12	-	L	ko:K03654	ko03018,map03018	ko00000,ko00001,ko01000,ko03400	ATP-dependent DNA helicase RecQ
CMLPILML_00149	6.77e-142	ppiB	5.2.1.8	-	G	ko:K03768	-	ko00000,ko01000,ko03110	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
CMLPILML_00150	1.5e-161	-	-	-	S	-	-	-	Protein of unknown function (DUF1275)
CMLPILML_00151	6.93e-261	xerS	-	-	L	ko:K03733	-	ko00000,ko03036	Belongs to the 'phage' integrase family
CMLPILML_00152	2.76e-214	lysR	-	-	K	-	-	-	Transcriptional regulator
CMLPILML_00153	3.45e-197	-	-	-	-	-	-	-	-
CMLPILML_00154	1.93e-209	-	-	-	S	-	-	-	EDD domain protein, DegV family
CMLPILML_00155	5.72e-85	-	-	-	-	-	-	-	-
CMLPILML_00156	0.0	FbpA	-	-	K	-	-	-	Fibronectin-binding protein
CMLPILML_00157	0.0	carB1	6.3.5.5	-	F	ko:K01955	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthase
CMLPILML_00158	4.62e-252	carA	6.3.5.5	-	F	ko:K01956	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthetase glutamine chain
CMLPILML_00159	1.01e-220	rluD	5.4.99.23	-	J	ko:K06180	-	ko00000,ko01000,ko03009	Responsible for synthesis of pseudouridine from uracil
CMLPILML_00160	9.07e-102	lspA	3.4.23.36	-	MU	ko:K03101	ko03060,map03060	ko00000,ko00001,ko01000,ko01002	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
CMLPILML_00161	0.0	fhs	6.3.4.3	-	F	ko:K01938	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Belongs to the formate--tetrahydrofolate ligase family
CMLPILML_00162	2.74e-77	-	-	-	-	-	-	-	-
CMLPILML_00163	7.03e-224	degV1	-	-	S	-	-	-	DegV family
CMLPILML_00164	1.52e-305	cpdA	-	-	S	-	-	-	Calcineurin-like phosphoesterase
CMLPILML_00165	1.61e-275	ypsC	-	-	L	ko:K07444	-	ko00000,ko01000	Belongs to the methyltransferase superfamily
CMLPILML_00166	1.37e-94	gpsB	-	-	D	-	-	-	Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
CMLPILML_00167	2.28e-137	ypsA	-	-	S	-	-	-	Belongs to the UPF0398 family
CMLPILML_00168	2.82e-153	recU	-	-	L	ko:K03700	-	ko00000,ko03400	Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
CMLPILML_00169	0.0	ponA	2.4.1.129, 3.4.16.4	GT51	M	ko:K05366	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01003,ko01011	penicillin-binding protein 1A
CMLPILML_00170	6.69e-149	nth	4.2.99.18	-	L	ko:K10773	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
CMLPILML_00171	2.06e-150	dnaD	-	-	L	ko:K02086	-	ko00000	DnaD domain protein
CMLPILML_00172	0.0	asnS	6.1.1.22	-	J	ko:K01893	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Asparaginyl-tRNA synthetase
CMLPILML_00173	5.37e-117	ypmB	-	-	S	-	-	-	Protein conserved in bacteria
CMLPILML_00174	0.0	dinG	3.6.4.12	-	L	ko:K03722	-	ko00000,ko01000,ko03400	helicase involved in DNA repair and perhaps also replication
CMLPILML_00175	0.0	addA	3.6.4.12	-	L	ko:K16898	-	ko00000,ko01000,ko03400	ATP-dependent helicase nuclease subunit A
CMLPILML_00176	0.0	rexB	3.6.4.12	-	L	ko:K16899	-	ko00000,ko01000,ko03400	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
CMLPILML_00177	1.8e-214	mvk	2.7.1.36	-	I	ko:K00869	ko00900,ko01100,ko01110,ko01130,ko04146,map00900,map01100,map01110,map01130,map04146	ko00000,ko00001,ko00002,ko01000	GHMP kinases N terminal domain
CMLPILML_00178	1.67e-223	mvaD	4.1.1.33	-	I	ko:K01597	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	diphosphomevalonate decarboxylase
CMLPILML_00179	2.53e-260	mvaK2	2.7.4.2	-	I	ko:K00938	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	phosphomevalonate kinase
CMLPILML_00180	2.24e-238	fni	5.3.3.2	-	C	ko:K01823	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
CMLPILML_00181	0.0	-	-	-	V	ko:K06147,ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
CMLPILML_00182	0.0	-	-	-	V	ko:K06147,ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
CMLPILML_00183	4.73e-203	-	2.3.1.81	-	V	ko:K00662	-	ko00000,ko01000,ko01504	Aminoglycoside 3-N-acetyltransferase
CMLPILML_00184	2e-207	rbsU	-	-	U	ko:K06216	-	ko00000,ko02000	ribose uptake protein RbsU
CMLPILML_00185	5.83e-87	rbsD	5.4.99.62	-	G	ko:K06726	ko02010,map02010	ko00000,ko00001,ko01000	Catalyzes the interconversion of beta-pyran and beta- furan forms of D-ribose
CMLPILML_00186	1.79e-110	-	-	-	S	-	-	-	ASCH
CMLPILML_00187	1.45e-173	-	-	-	F	-	-	-	Phosphorylase superfamily
CMLPILML_00188	4.43e-115	-	2.3.1.57	-	K	ko:K00657	ko00330,ko01100,ko04216,map00330,map01100,map04216	ko00000,ko00001,ko00002,ko01000	Acetyltransferase (GNAT) family
CMLPILML_00189	1.1e-129	rimL	-	-	J	ko:K03817	-	ko00000,ko01000,ko03009	Acetyltransferase (GNAT) domain
CMLPILML_00190	2.21e-57	-	-	-	-	ko:K07473	-	ko00000,ko02048	-
CMLPILML_00191	6.11e-68	-	-	-	S	ko:K19157	-	ko00000,ko01000,ko02048	endonuclease activity
CMLPILML_00192	1.76e-193	-	-	-	S	-	-	-	Fic/DOC family
CMLPILML_00193	4.3e-185	-	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Tyrosine phosphatase family
CMLPILML_00194	3.65e-54	-	-	-	-	-	-	-	-
CMLPILML_00195	1.39e-174	-	-	-	-	-	-	-	-
CMLPILML_00196	1.28e-82	-	-	-	-	-	-	-	-
CMLPILML_00197	9.1e-65	-	-	-	S	-	-	-	MazG-like family
CMLPILML_00198	7.8e-196	-	-	-	S	-	-	-	Protein of unknown function (DUF2785)
CMLPILML_00199	2.25e-31	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
CMLPILML_00200	1.43e-48	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
CMLPILML_00201	2.39e-64	-	-	-	-	-	-	-	-
CMLPILML_00202	0.0	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC transporter transmembrane region
CMLPILML_00203	1.01e-110	yfhC	-	-	C	-	-	-	nitroreductase
CMLPILML_00204	0.0	-	-	-	V	ko:K06147,ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
CMLPILML_00205	5.46e-193	-	-	-	K	-	-	-	Helix-turn-helix domain
CMLPILML_00206	1.1e-181	hflC	-	-	O	ko:K04087	-	ko00000,ko00002,ko01000	prohibitin homologues
CMLPILML_00207	2.21e-186	-	-	-	S	-	-	-	Protein of unknown function (DUF975)
CMLPILML_00208	8.4e-74	-	-	-	K	-	-	-	sequence-specific DNA binding
CMLPILML_00210	2.05e-136	yokL3	-	-	J	-	-	-	Acetyltransferase (GNAT) domain
CMLPILML_00211	1.15e-179	-	-	-	-	-	-	-	-
CMLPILML_00212	0.0	XK27_00340	3.1.3.5	-	F	ko:K01081	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the 5'-nucleotidase family
CMLPILML_00213	1.5e-56	-	-	-	G	-	-	-	Ribose/Galactose Isomerase
CMLPILML_00214	1.42e-66	-	-	-	-	-	-	-	-
CMLPILML_00215	1.81e-38	-	-	-	-	-	-	-	-
CMLPILML_00216	1.57e-152	-	-	-	C	-	-	-	nitroreductase
CMLPILML_00217	0.0	-	-	-	C	-	-	-	FMN_bind
CMLPILML_00218	8.2e-214	-	-	-	K	-	-	-	LysR substrate binding domain
CMLPILML_00219	9.14e-204	thrB	2.7.1.39	-	F	ko:K00872	ko00260,ko01100,ko01110,ko01120,ko01230,map00260,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
CMLPILML_00220	1.75e-294	hom	1.1.1.3	-	E	ko:K00003	ko00260,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00270,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	homoserine dehydrogenase
CMLPILML_00221	0.0	thrC	4.2.3.1	-	E	ko:K01733	ko00260,ko00750,ko01100,ko01110,ko01120,ko01230,map00260,map00750,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Threonine synthase
CMLPILML_00222	5.21e-254	asd	1.2.1.11	-	E	ko:K00133	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
CMLPILML_00223	0.0	lysC	2.7.2.4	-	E	ko:K00928	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the aspartokinase family
CMLPILML_00224	0.0	pepO	-	-	O	ko:K07386	-	ko00000,ko01000,ko01002	Peptidase family M13
CMLPILML_00225	0.0	ylbB	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter permease
CMLPILML_00226	6.34e-165	-	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
CMLPILML_00227	1.11e-163	alkD	-	-	L	-	-	-	DNA alkylation repair enzyme
CMLPILML_00228	0.0	ppc	4.1.1.31	-	H	ko:K01595	ko00620,ko00680,ko00710,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00710,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
CMLPILML_00229	1.02e-136	pncA	-	-	Q	-	-	-	Isochorismatase family
CMLPILML_00230	4.14e-121	pyrR	2.4.2.9	-	F	ko:K02825	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000,ko03000	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
CMLPILML_00231	0.0	carB	6.3.5.5	-	F	ko:K01955	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthase
CMLPILML_00232	2.26e-269	carA	6.3.5.5	-	F	ko:K01956	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthetase glutamine chain
CMLPILML_00233	3.11e-308	pyrC	3.5.2.3	-	F	ko:K01465	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
CMLPILML_00234	6.42e-237	pyrB	2.1.3.2	-	F	ko:K00609	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the ATCase OTCase family
CMLPILML_00235	2.9e-122	pyrR	2.4.2.9	-	F	ko:K02825	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000,ko03000	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
CMLPILML_00236	2.34e-217	pyrD	1.3.1.14, 1.3.98.1	-	F	ko:K00226,ko:K17828	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
CMLPILML_00237	2.49e-166	pyrF	4.1.1.23	-	F	ko:K01591	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
CMLPILML_00238	1.11e-153	pyrE	2.4.2.10	-	F	ko:K00762	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
CMLPILML_00239	0.0	-	-	-	I	-	-	-	Protein of unknown function (DUF2974)
CMLPILML_00240	4.51e-197	yxeH	-	-	S	-	-	-	hydrolase
CMLPILML_00241	2.48e-215	-	-	-	S	-	-	-	DUF218 domain
CMLPILML_00242	7.47e-70	ybjQ	-	-	S	-	-	-	Belongs to the UPF0145 family
CMLPILML_00243	2.49e-297	rsmF	-	-	J	-	-	-	NOL1 NOP2 sun family protein
CMLPILML_00244	8.88e-221	-	-	-	-	-	-	-	-
CMLPILML_00245	2.2e-171	-	-	-	-	-	-	-	-
CMLPILML_00246	1.27e-134	lepB	3.4.21.89	-	U	ko:K03100	ko02024,ko03060,map02024,map03060	ko00000,ko00001,ko01000,ko01002	Belongs to the peptidase S26 family
CMLPILML_00247	1.45e-30	-	-	-	-	-	-	-	-
CMLPILML_00248	1.55e-140	-	-	-	-	-	-	-	-
CMLPILML_00249	6.56e-185	-	-	-	-	-	-	-	-
CMLPILML_00250	1.46e-160	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
CMLPILML_00251	2.1e-78	lexA	-	-	K	ko:K07979	-	ko00000,ko03000	Transcriptional regulator, GntR family
CMLPILML_00252	1.88e-313	pepT	3.4.11.4	-	E	ko:K01258	-	ko00000,ko01000,ko01002	Cleaves the N-terminal amino acid of tripeptides
CMLPILML_00253	1.15e-195	yqfO	-	-	S	-	-	-	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
CMLPILML_00254	3.7e-155	trmK	2.1.1.217	-	S	ko:K06967	-	ko00000,ko01000,ko03016	SAM-dependent methyltransferase
CMLPILML_00255	2.29e-254	sigA	-	-	K	ko:K03086	-	ko00000,ko03021	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
CMLPILML_00256	0.0	dnaG	-	-	L	ko:K02316	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
CMLPILML_00257	0.0	glyS	6.1.1.14	-	J	ko:K01879	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Glycyl-tRNA synthetase beta subunit
CMLPILML_00258	1.82e-228	glyQ	6.1.1.14	-	J	ko:K01878	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	glycyl-tRNA synthetase alpha subunit
CMLPILML_00259	4.14e-177	recO	-	-	L	ko:K03584	ko03440,map03440	ko00000,ko00001,ko03400	Involved in DNA repair and RecF pathway recombination
CMLPILML_00260	4.24e-217	era	-	-	S	ko:K03595	-	ko00000,ko03009,ko03029	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
CMLPILML_00261	4.52e-128	ybeY	-	-	S	ko:K07042	-	ko00000,ko03009	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
CMLPILML_00262	1.67e-222	phoH	-	-	T	ko:K06217	-	ko00000	phosphate starvation-inducible protein PhoH
CMLPILML_00263	3.98e-79	yqeY	-	-	S	ko:K09117	-	ko00000	YqeY-like protein
CMLPILML_00264	8.33e-31	rpsU	-	-	J	ko:K02970	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bS21 family
CMLPILML_00265	5.46e-200	yqfL	2.7.11.33, 2.7.4.28	-	F	ko:K09773	-	ko00000,ko01000	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
CMLPILML_00266	1.71e-206	yitT	-	-	S	-	-	-	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CMLPILML_00267	1.53e-139	msrA	1.8.4.11, 1.8.4.12	-	O	ko:K07304,ko:K12267	-	ko00000,ko01000	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
CMLPILML_00268	4.33e-185	-	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase family
CMLPILML_00269	1.14e-105	msrB	1.8.4.12	-	O	ko:K07305	-	ko00000,ko01000	peptide methionine sulfoxide reductase
CMLPILML_00270	3.88e-284	aspC	-	-	E	ko:K00841	ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase
CMLPILML_00271	1e-43	-	-	-	-	-	-	-	-
CMLPILML_00272	2.52e-210	htpX	-	-	O	ko:K03799	-	ko00000,ko00002,ko01000,ko01002	Peptidase family M48
CMLPILML_00274	1.33e-99	-	-	-	S	-	-	-	HIRAN
CMLPILML_00275	1.33e-09	licB2	2.7.1.196, 2.7.1.205	-	G	ko:K02760	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	pts system
CMLPILML_00276	1.53e-243	rfbD	1.1.1.133	-	M	ko:K00067	ko00521,ko00523,ko01130,map00521,map00523,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
CMLPILML_00277	3.48e-152	rfbC	5.1.3.13	-	M	ko:K01790	ko00521,ko00523,ko01130,map00521,map00523,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
CMLPILML_00278	1.66e-214	rfbA	2.7.7.24	-	H	ko:K00973	ko00521,ko00523,ko00525,ko01130,map00521,map00523,map00525,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
CMLPILML_00279	5e-268	rfbB	4.2.1.46	-	M	ko:K01710	ko00521,ko00523,ko00525,ko01055,ko01130,map00521,map00523,map00525,map01055,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
CMLPILML_00280	1.3e-286	-	-	-	KQ	-	-	-	helix_turn_helix, mercury resistance
CMLPILML_00281	5.27e-235	-	-	-	V	-	-	-	Abi-like protein
CMLPILML_00282	2.28e-31	tnpA1	-	-	L	-	-	-	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
CMLPILML_00283	7.2e-235	tnpA1	-	-	L	-	-	-	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
CMLPILML_00284	4.11e-229	-	-	-	S	-	-	-	Acyltransferase family
CMLPILML_00285	0.0	cps1C	-	-	S	ko:K03328	-	ko00000	Membrane protein involved in the export of O-antigen and teichoic acid
CMLPILML_00286	1.1e-281	glf	5.4.99.9	-	M	ko:K01854	ko00052,ko00520,map00052,map00520	ko00000,ko00001,ko01000	UDP-galactopyranose mutase
CMLPILML_00287	1.08e-270	-	-	-	-	-	-	-	-
CMLPILML_00288	7.35e-249	-	-	-	M	-	-	-	Glycosyl transferase family 2
CMLPILML_00289	5.88e-256	-	-	-	M	-	-	-	transferase activity, transferring glycosyl groups
CMLPILML_00290	6.33e-254	-	-	-	M	-	-	-	Glycosyl transferases group 1
CMLPILML_00291	4.29e-207	-	-	GT2	S	ko:K12990	ko02024,ko02025,map02024,map02025	ko00000,ko00001,ko01000,ko01003,ko01005	Glycosyl transferase family 2
CMLPILML_00292	5.28e-237	-	-	-	H	-	-	-	Glycosyl transferase family 11
CMLPILML_00293	3.49e-160	-	-	-	M	-	-	-	Glycosyltransferase sugar-binding region containing DXD motif
CMLPILML_00294	2.18e-117	-	-	-	S	-	-	-	Glycosyltransferase family 28 C-terminal domain
CMLPILML_00295	1.21e-108	-	-	-	M	-	-	-	Oligosaccharide biosynthesis protein Alg14 like
CMLPILML_00296	2.06e-157	epsE2	-	-	M	-	-	-	Bacterial sugar transferase
CMLPILML_00297	5.69e-187	ywqE	3.1.3.48	-	GM	ko:K01104	-	ko00000,ko01000	PHP domain protein
CMLPILML_00298	3.3e-162	ywqD	-	-	D	-	-	-	Capsular exopolysaccharide family
CMLPILML_00299	5.62e-193	epsB	-	-	M	-	-	-	biosynthesis protein
CMLPILML_00300	5.1e-220	brpA	-	-	K	-	-	-	Cell envelope-like function transcriptional attenuator common domain protein
CMLPILML_00301	2.58e-103	-	-	-	K	-	-	-	DNA-templated transcription, initiation
CMLPILML_00302	1.12e-212	-	-	-	-	-	-	-	-
CMLPILML_00303	3.15e-158	frnE	5.3.4.1	-	Q	ko:K01829	-	ko00000,ko01000	DSBA-like thioredoxin domain
CMLPILML_00304	6.2e-302	-	-	-	-	-	-	-	-
CMLPILML_00305	4.05e-102	-	-	-	S	-	-	-	Domain of unknown function (DUF4767)
CMLPILML_00306	1.29e-107	-	-	-	-	-	-	-	-
CMLPILML_00307	3.98e-116	ptpA	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
CMLPILML_00308	5.34e-134	engB	-	-	D	ko:K03978	-	ko00000,ko03036	Necessary for normal cell division and for the maintenance of normal septation
CMLPILML_00309	2.5e-296	clpX	-	-	O	ko:K03544	ko04112,map04112	ko00000,ko00001,ko03110	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
CMLPILML_00310	1.79e-278	tig	-	-	D	ko:K03545	-	ko00000	Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
CMLPILML_00311	6.94e-288	tuf	-	-	J	ko:K02358,ko:K15771	ko02010,map02010	ko00000,ko00001,ko00002,ko02000,ko03012,ko03029,ko04147	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
CMLPILML_00312	2e-206	-	-	-	-	-	-	-	-
CMLPILML_00313	0.0	rnjB	-	-	J	ko:K12574	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
CMLPILML_00314	1.44e-56	rpsO	-	-	J	ko:K02956	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
CMLPILML_00315	1.97e-46	rpsT	-	-	J	ko:K02968	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 16S ribosomal RNA
CMLPILML_00316	1.23e-229	holA	2.7.7.7	-	L	ko:K02340	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III delta subunit
CMLPILML_00317	0.0	comEC	-	-	S	ko:K02238	-	ko00000,ko00002,ko02044	Competence protein ComEC
CMLPILML_00318	5.23e-132	comEA	-	-	L	ko:K02237	-	ko00000,ko00002,ko02044	Competence protein ComEA
CMLPILML_00319	1.45e-236	lon	-	-	T	ko:K07177	ko02024,map02024	ko00000,ko00001,ko01002	Belongs to the peptidase S16 family
CMLPILML_00320	5.77e-113	coaD	2.7.7.3	-	H	ko:K00954	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
CMLPILML_00321	7.11e-124	rsmD	2.1.1.171	-	L	ko:K08316	-	ko00000,ko01000,ko03009	RNA methyltransferase, RsmD family
CMLPILML_00322	7.67e-69	ylbG	-	-	S	-	-	-	UPF0298 protein
CMLPILML_00323	1.66e-269	ftsW	-	-	D	ko:K03588	ko04112,map04112	ko00000,ko00001,ko02000,ko03036	Belongs to the SEDS family
CMLPILML_00324	0.0	typA	-	-	T	ko:K06207	-	ko00000	GTP-binding protein TypA
CMLPILML_00325	2.39e-132	def	3.5.1.88	-	J	ko:K01462	-	ko00000,ko01000	Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
CMLPILML_00326	1.53e-47	ykzG	-	-	S	-	-	-	Belongs to the UPF0356 family
CMLPILML_00327	0.0	rnjA	-	-	J	ko:K12574	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
CMLPILML_00328	5.63e-226	ytlR	-	-	I	-	-	-	Diacylglycerol kinase catalytic domain
CMLPILML_00329	0.0	recD2	3.1.11.5	-	L	ko:K03581	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
CMLPILML_00330	2.93e-150	-	-	-	S	-	-	-	repeat protein
CMLPILML_00331	4.52e-161	pgm	-	-	G	-	-	-	Phosphoglycerate mutase family
CMLPILML_00332	3e-278	mnmA	2.8.1.13	-	J	ko:K00566	ko04122,map04122	ko00000,ko00001,ko01000,ko03016	Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
CMLPILML_00333	1.8e-76	XK27_04120	-	-	S	-	-	-	Putative amino acid metabolism
CMLPILML_00334	4.29e-276	iscS	2.8.1.7	-	E	ko:K04487	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko02048,ko03016,ko03029	Aminotransferase class V
CMLPILML_00335	1.68e-163	mtnN	3.2.2.9	-	E	ko:K01243	ko00270,ko01100,ko01230,map00270,map01100,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
CMLPILML_00336	1.22e-23	-	-	-	-	-	-	-	-
CMLPILML_00337	3.65e-133	nudF	3.6.1.13	-	L	ko:K01515	ko00230,map00230	ko00000,ko00001,ko01000	ADP-ribose pyrophosphatase
CMLPILML_00338	3.24e-44	cspA	-	-	K	ko:K03704	-	ko00000,ko03000	'Cold-shock' DNA-binding domain
CMLPILML_00339	0.0	ileS	6.1.1.5	-	J	ko:K01870	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
CMLPILML_00340	2.05e-163	divIVA	-	-	D	ko:K04074	-	ko00000,ko03036	DivIVA domain protein
CMLPILML_00341	3.41e-188	ylmH	-	-	S	-	-	-	S4 domain protein
CMLPILML_00342	1.93e-47	ylmG	-	-	S	ko:K02221	-	ko00000,ko02044	YGGT family
CMLPILML_00343	4.43e-95	sepF	-	-	D	ko:K09772	-	ko00000,ko03036	Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
CMLPILML_00344	7.39e-309	ftsZ	-	-	D	ko:K03531	ko04112,map04112	ko00000,ko00001,ko02048,ko03036,ko04812	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
CMLPILML_00345	2.81e-313	ftsA	-	-	D	ko:K03590	ko04112,map04112	ko00000,ko00001,ko03036,ko04812	Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
CMLPILML_00346	4.13e-197	divIB	-	-	D	ko:K03589	ko04112,map04112	ko00000,ko00001,ko03036	Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
CMLPILML_00347	2.01e-267	murG	2.4.1.227	GT28	M	ko:K02563	ko00550,ko01100,ko01502,ko04112,map00550,map01100,map01502,map04112	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
CMLPILML_00348	0.0	murD	6.3.2.9	-	M	ko:K01925	ko00471,ko00550,ko01100,map00471,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
CMLPILML_00349	1.82e-226	mraY	2.7.8.13	-	M	ko:K01000	ko00550,ko01100,ko01502,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
CMLPILML_00350	0.0	pbpX	-	-	M	ko:K08724,ko:K12552,ko:K12556	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01011	Penicillin-binding Protein
CMLPILML_00351	3.95e-73	ftsL	-	-	D	-	-	-	Cell division protein FtsL
CMLPILML_00352	7.69e-226	rsmH	2.1.1.199	-	J	ko:K03438	-	ko00000,ko01000,ko03009	Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
CMLPILML_00353	1.33e-100	mraZ	-	-	K	ko:K03925	-	ko00000	Belongs to the MraZ family
CMLPILML_00354	7.67e-69	-	-	-	S	-	-	-	Protein of unknown function (DUF3397)
CMLPILML_00355	1.66e-19	-	-	-	S	-	-	-	Protein of unknown function (DUF4044)
CMLPILML_00356	9.8e-124	mreD	-	-	-	ko:K03571	-	ko00000,ko03036	-
CMLPILML_00357	2.88e-189	mreC	-	-	M	ko:K03570	-	ko00000,ko03036	Involved in formation and maintenance of cell shape
CMLPILML_00358	2.19e-225	mreB	-	-	D	ko:K03569	-	ko00000,ko02048,ko03036,ko04812	cell shape determining protein MreB
CMLPILML_00359	5.06e-144	radC	-	-	L	ko:K03630	-	ko00000	DNA repair protein
CMLPILML_00360	1.56e-160	-	-	-	S	-	-	-	Haloacid dehalogenase-like hydrolase
CMLPILML_00361	5.72e-301	folC	6.3.2.12, 6.3.2.17	-	H	ko:K11754	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the folylpolyglutamate synthase family
CMLPILML_00362	0.0	valS	6.1.1.9	-	J	ko:K01873	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
CMLPILML_00363	0.0	yoaB	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	P-type ATPase
CMLPILML_00364	4.76e-269	-	-	-	C	-	-	-	Glycerophosphoryl diester phosphodiesterase family
CMLPILML_00365	7.16e-161	rsuA	5.4.99.19	-	J	ko:K06183	-	ko00000,ko01000,ko03009	Belongs to the pseudouridine synthase RsuA family
CMLPILML_00366	2.67e-292	thiI	2.8.1.4	-	H	ko:K03151	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko03016	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CMLPILML_00367	4.29e-276	iscS2	2.8.1.7	-	E	ko:K04487	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko02048,ko03016,ko03029	Aminotransferase class V
CMLPILML_00368	0.0	ezrA	-	-	D	ko:K06286	-	ko00000,ko03036	modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
CMLPILML_00370	7.54e-143	rpsD	-	-	J	ko:K02986	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
CMLPILML_00371	1.21e-106	-	-	-	S	-	-	-	Protein of unknown function (DUF1694)
CMLPILML_00372	3.11e-307	rarA	-	-	L	ko:K07478	-	ko00000	recombination factor protein RarA
CMLPILML_00373	2.34e-08	-	-	-	-	-	-	-	-
CMLPILML_00374	3.9e-106	uspA	-	-	T	-	-	-	universal stress protein
CMLPILML_00375	3.34e-287	rodA	-	-	D	ko:K05837	-	ko00000,ko03036	Belongs to the SEDS family
CMLPILML_00376	3.08e-47	-	-	-	S	-	-	-	Protein of unknown function (DUF2969)
CMLPILML_00377	6.72e-70	ytjA	-	-	S	ko:K08998	-	ko00000	Could be involved in insertion of integral membrane proteins into the membrane
CMLPILML_00378	2.97e-21	-	-	-	S	-	-	-	DNA-directed RNA polymerase subunit beta
CMLPILML_00379	1.01e-228	mbl	-	-	D	ko:K03569	-	ko00000,ko02048,ko03036,ko04812	Cell shape determining protein MreB Mrl
CMLPILML_00380	3e-41	-	-	-	S	-	-	-	Protein of unknown function (DUF1146)
CMLPILML_00381	3.48e-93	atpC	-	-	C	ko:K02114	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Produces ATP from ADP in the presence of a proton gradient across the membrane
CMLPILML_00382	0.0	atpD	3.6.3.14	-	C	ko:K02112	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko01000	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
CMLPILML_00383	2.1e-220	atpG	-	-	C	ko:K02115	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
CMLPILML_00384	0.0	atpA	3.6.3.14	-	C	ko:K02111	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko01000	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
CMLPILML_00385	7.97e-121	atpH	-	-	C	ko:K02113	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
CMLPILML_00386	1.96e-79	atpF	-	-	C	ko:K02109	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
CMLPILML_00387	9.31e-36	atpE	-	-	C	ko:K02110	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
CMLPILML_00388	1.43e-162	atpB	-	-	C	ko:K02108	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko03110	it plays a direct role in the translocation of protons across the membrane
CMLPILML_00389	2.24e-147	upp	2.4.2.9	-	F	ko:K00761	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
CMLPILML_00390	9.87e-242	ywlC	2.7.7.87	-	J	ko:K07566	-	ko00000,ko01000,ko03009,ko03016	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
CMLPILML_00391	7.54e-204	prmC	2.1.1.297	-	J	ko:K02493	-	ko00000,ko01000,ko03012	Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
CMLPILML_00392	1.27e-250	prfA	-	-	J	ko:K02835	-	ko00000,ko03012	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
CMLPILML_00393	5.77e-145	tdk	2.7.1.21	-	F	ko:K00857	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	thymidine kinase
CMLPILML_00394	0.0	murE2	6.3.2.13	-	M	ko:K01928	ko00300,ko00550,map00300,map00550	ko00000,ko00001,ko01000,ko01011	Mur ligase, middle domain
CMLPILML_00395	2.07e-249	ampC	-	-	V	-	-	-	Beta-lactamase
CMLPILML_00398	2.98e-94	-	-	-	-	-	-	-	-
CMLPILML_00399	6.39e-141	-	-	-	EGP	-	-	-	Major Facilitator
CMLPILML_00400	2.79e-108	-	-	-	EGP	-	-	-	Major Facilitator
CMLPILML_00401	0.0	pgi	5.3.1.9	-	G	ko:K01810	ko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the GPI family
CMLPILML_00402	1.93e-139	vanZ	-	-	V	-	-	-	VanZ like family
CMLPILML_00403	0.0	ltaS	2.7.8.20	-	M	ko:K19005	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
CMLPILML_00404	0.0	yclK	-	-	T	-	-	-	Histidine kinase
CMLPILML_00405	6.61e-167	-	-	-	K	-	-	-	Transcriptional regulatory protein, C terminal
CMLPILML_00406	9.78e-89	-	-	-	S	-	-	-	SdpI/YhfL protein family
CMLPILML_00407	7.57e-245	manA	5.3.1.8	-	G	ko:K01809	ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	mannose-6-phosphate isomerase
CMLPILML_00408	1.62e-100	patB	4.4.1.8	-	E	ko:K14155	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko01000,ko01007	Aminotransferase, class I
CMLPILML_00409	4.11e-105	-	-	-	M	-	-	-	Protein of unknown function (DUF3737)
CMLPILML_00410	8.38e-36	sacB	2.4.1.10, 2.4.1.9	GH68	M	ko:K00692,ko:K20811	ko00500,ko01100,ko02020,map00500,map01100,map02020	ko00000,ko00001,ko01000,ko01003	Levansucrase/Invertase
CMLPILML_00411	1.27e-220	sacB	2.4.1.10, 2.4.1.9	GH68	M	ko:K00692,ko:K20811	ko00500,ko01100,ko02020,map00500,map01100,map02020	ko00000,ko00001,ko01000,ko01003	Levansucrase/Invertase
CMLPILML_00416	3.1e-276	metK	2.5.1.6	-	H	ko:K00789	ko00270,ko01100,ko01110,ko01230,map00270,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
CMLPILML_00417	0.0	mdr	-	-	EGP	-	-	-	Major Facilitator
CMLPILML_00418	1.7e-164	yodM	3.6.1.27	-	I	ko:K19302	ko00550,map00550	ko00000,ko00001,ko01000,ko01011	Acid phosphatase homologues
CMLPILML_00419	0.0	leuS	6.1.1.4	-	J	ko:K01869	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Belongs to the class-I aminoacyl-tRNA synthetase family
CMLPILML_00420	0.0	ytgP	-	-	S	ko:K03328	-	ko00000	Polysaccharide biosynthesis protein
CMLPILML_00421	1.82e-278	-	-	-	I	-	-	-	Protein of unknown function (DUF2974)
CMLPILML_00422	2.27e-164	-	-	-	-	-	-	-	-
CMLPILML_00423	1.32e-192	nnrD	4.2.1.136, 5.1.99.6	-	H	ko:K17758,ko:K17759	-	ko00000,ko01000	Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
CMLPILML_00424	1.96e-161	-	-	-	M	-	-	-	ErfK YbiS YcfS YnhG
CMLPILML_00425	5.83e-222	dacA	3.4.16.4	-	M	ko:K07258	ko00550,ko01100,map00550,map01100	ko00000,ko00001,ko01000,ko01002,ko01011	Belongs to the peptidase S11 family
CMLPILML_00426	0.0	argS	6.1.1.19	-	J	ko:K01887	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Arginyl-tRNA synthetase
CMLPILML_00427	3.12e-220	fba	4.1.2.13, 4.1.2.29	-	G	ko:K01624,ko:K03339	ko00010,ko00030,ko00051,ko00562,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00562,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Fructose-1,6-bisphosphate aldolase, class II
CMLPILML_00428	4.75e-67	-	-	-	-	-	-	-	-
CMLPILML_00429	4.65e-100	-	-	-	K	ko:K03827	-	ko00000,ko01000	Acetyltransferase (GNAT) domain
CMLPILML_00430	3.38e-76	-	-	-	S	-	-	-	Antibiotic biosynthesis monooxygenase
CMLPILML_00432	3.04e-123	hpt	2.4.2.8	-	F	ko:K00760	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the purine pyrimidine phosphoribosyltransferase family
CMLPILML_00433	3.72e-166	-	-	-	F	-	-	-	Glutamine amidotransferase class-I
CMLPILML_00434	9.45e-145	ylbE	-	-	GM	-	-	-	NAD(P)H-binding
CMLPILML_00435	2.16e-108	ytsP	1.8.4.14	-	T	ko:K08968	ko00270,map00270	ko00000,ko00001,ko01000	GAF domain-containing protein
CMLPILML_00436	8.55e-247	-	-	-	S	-	-	-	Bacteriocin helveticin-J
CMLPILML_00437	4.71e-139	tag	3.2.2.20	-	L	ko:K01246	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	glycosylase
CMLPILML_00438	3.31e-212	-	-	-	S	ko:K07088	-	ko00000	Membrane transport protein
CMLPILML_00439	4.43e-177	-	-	-	S	ko:K07052	-	ko00000	CAAX amino terminal protease
CMLPILML_00440	5.44e-187	glpF	-	-	U	ko:K02440	-	ko00000,ko02000	Belongs to the MIP aquaporin (TC 1.A.8) family
CMLPILML_00441	0.0	qacA	-	-	EGP	-	-	-	Major Facilitator
CMLPILML_00442	9.29e-182	qacA	-	-	EGP	-	-	-	Major Facilitator
CMLPILML_00443	8.38e-126	qacA	-	-	EGP	-	-	-	Major Facilitator
CMLPILML_00444	5.51e-123	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
CMLPILML_00445	0.0	-	4.2.1.53	-	S	ko:K10254	-	ko00000,ko01000	Myosin-crossreactive antigen
CMLPILML_00446	4.48e-102	-	-	-	K	-	-	-	acetyltransferase
CMLPILML_00447	1.57e-187	-	3.1.3.102, 3.1.3.104	-	S	ko:K20861	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Sucrose-6F-phosphate phosphohydrolase
CMLPILML_00448	4.86e-134	-	-	-	S	-	-	-	Protein of unknown function (DUF1440)
CMLPILML_00449	1.99e-193	-	-	-	S	-	-	-	hydrolase
CMLPILML_00450	1.44e-98	-	-	-	K	-	-	-	Transcriptional regulator
CMLPILML_00451	2.78e-79	-	-	-	K	-	-	-	Transcriptional regulator
CMLPILML_00452	2.57e-307	pyrP	-	-	F	ko:K02824	-	ko00000,ko02000	Permease
CMLPILML_00453	2.29e-176	-	-	-	K	ko:K02530	-	ko00000,ko03000	DeoR C terminal sensor domain
CMLPILML_00454	9.37e-96	lacA	5.3.1.26	-	G	ko:K01819	ko00052,ko01100,map00052,map01100	ko00000,ko00001,ko01000	Ribose/Galactose Isomerase
CMLPILML_00455	2.86e-137	-	5.3.1.26	-	G	ko:K01819	ko00052,ko01100,map00052,map01100	ko00000,ko00001,ko01000	Ribose/Galactose Isomerase
CMLPILML_00456	5.07e-166	-	-	-	S	-	-	-	Domain of unknown function (DUF4867)
CMLPILML_00457	1.71e-111	-	2.7.1.204	-	G	ko:K20112	ko02060,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
CMLPILML_00458	6.32e-68	-	2.7.1.204	-	G	ko:K20113	ko02060,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
CMLPILML_00459	0.0	gatC	-	-	G	ko:K20114	ko02060,map02060	ko00000,ko00001,ko00002,ko02000	PTS system sugar-specific permease component
CMLPILML_00460	3.59e-52	-	-	-	-	-	-	-	-
CMLPILML_00461	1.19e-195	lacT	-	-	K	ko:K02531	-	ko00000,ko03000	CAT RNA binding domain
CMLPILML_00462	6.12e-76	lacF	2.7.1.196, 2.7.1.205, 2.7.1.207	-	G	ko:K02759,ko:K02786	ko00052,ko00500,ko01100,ko02060,map00052,map00500,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIA subunit
CMLPILML_00463	0.0	lacE	2.7.1.207	-	G	ko:K02787,ko:K02788	ko00052,ko01100,ko02060,map00052,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphotransferase system, EIIC
CMLPILML_00464	0.0	lacG	3.2.1.21, 3.2.1.85	-	G	ko:K01220,ko:K05350	ko00052,ko00460,ko00500,ko00940,ko01100,ko01110,map00052,map00460,map00500,map00940,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
CMLPILML_00465	3.04e-258	-	-	-	S	-	-	-	PFAM Archaeal ATPase
CMLPILML_00466	1.31e-211	-	-	-	K	-	-	-	LysR family
CMLPILML_00467	0.0	-	-	-	C	-	-	-	FMN_bind
CMLPILML_00468	0.0	-	-	-	P	ko:K03319	-	ko00000	Sodium:sulfate symporter transmembrane region
CMLPILML_00469	1.08e-216	glsA	3.5.1.2	-	E	ko:K01425	ko00220,ko00250,ko00471,ko01100,ko04724,ko04727,ko04964,ko05206,ko05230,map00220,map00250,map00471,map01100,map04724,map04727,map04964,map05206,map05230	ko00000,ko00001,ko01000	Belongs to the glutaminase family
CMLPILML_00470	1.23e-144	-	-	-	I	-	-	-	Acid phosphatase homologues
CMLPILML_00471	2.3e-276	pmrA	-	-	EGP	ko:K08161	-	ko00000,ko02000	MFS_1 like family
CMLPILML_00472	7.95e-45	-	-	-	-	-	-	-	-
CMLPILML_00473	4.11e-95	rmaE	-	-	K	-	-	-	helix_turn_helix multiple antibiotic resistance protein
CMLPILML_00474	1.64e-108	-	-	-	-	-	-	-	-
CMLPILML_00475	5.75e-267	pepA	-	-	E	-	-	-	M42 glutamyl aminopeptidase
CMLPILML_00477	5.16e-115	-	2.7.1.191	-	G	ko:K02794	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system sorbose subfamily IIB component
CMLPILML_00478	1.4e-155	-	-	-	G	ko:K02795	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	PTS system sorbose-specific iic component
CMLPILML_00479	1.49e-194	-	-	-	G	ko:K02796	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	PTS system mannose/fructose/sorbose family IID component
CMLPILML_00480	2.38e-94	-	2.7.1.191	-	G	ko:K02793	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system fructose IIA component
CMLPILML_00481	0.0	malL	3.2.1.10	GH13	G	ko:K01182	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Alpha amylase, catalytic domain protein
CMLPILML_00482	5.45e-232	-	-	-	K	ko:K02529	-	ko00000,ko03000	helix_turn _helix lactose operon repressor
CMLPILML_00483	0.0	-	3.2.1.177	GH31	G	ko:K01811	-	ko00000,ko01000	Glycosyl hydrolases family 31
CMLPILML_00484	0.0	dtpT	-	-	U	ko:K03305	-	ko00000	amino acid peptide transporter
CMLPILML_00485	2.81e-265	-	-	-	EGP	ko:K08196	-	ko00000,ko02000	Major Facilitator
CMLPILML_00486	2.6e-202	-	-	-	S	-	-	-	Alpha beta hydrolase
CMLPILML_00487	2.27e-98	-	-	-	K	-	-	-	Transcriptional regulator, MarR family
CMLPILML_00488	0.0	XK27_09600	-	-	V	ko:K06147,ko:K18891	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter, ATP-binding protein
CMLPILML_00489	0.0	XK27_09605	-	-	V	ko:K18892	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter transmembrane region
CMLPILML_00490	6.61e-190	peb1A	-	-	ET	ko:K10039	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
CMLPILML_00491	4.37e-176	glnQ	-	-	E	ko:K10041	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
CMLPILML_00492	1.18e-191	peb1A	-	-	ET	ko:K10039	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
CMLPILML_00493	1.5e-142	glnM	-	-	P	ko:K10040	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
CMLPILML_00494	7.95e-140	glnP	-	-	P	ko:K10040	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
CMLPILML_00495	1.77e-199	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
CMLPILML_00496	0.0	treC	3.2.1.93	GH13	G	ko:K01226	ko00500,map00500	ko00000,ko00001,ko01000	Alpha amylase, catalytic domain protein
CMLPILML_00497	3.51e-167	treR	-	-	K	ko:K03486	-	ko00000,ko03000	UTRA
CMLPILML_00498	0.0	treB	-	-	G	ko:K02755,ko:K02756,ko:K02757	ko02060,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
CMLPILML_00499	1.16e-128	-	-	-	S	-	-	-	Putative adhesin
CMLPILML_00500	9.28e-146	udk	2.7.1.48	-	F	ko:K00876	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	Cytidine monophosphokinase
CMLPILML_00501	9.09e-204	-	-	-	EGP	-	-	-	Major facilitator superfamily
CMLPILML_00502	9.4e-100	-	-	-	EGP	-	-	-	Major facilitator superfamily
CMLPILML_00504	7.42e-75	-	-	-	S	-	-	-	Enterocin A Immunity
CMLPILML_00505	0.0	pacL	-	-	P	-	-	-	Cation transporter/ATPase, N-terminus
CMLPILML_00506	1.36e-207	-	-	-	S	-	-	-	Phospholipase, patatin family
CMLPILML_00507	0.0	glnPH2	-	-	P	ko:K02029,ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter permease
CMLPILML_00508	2.68e-170	glnQ	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
CMLPILML_00509	2.8e-124	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
CMLPILML_00510	2.89e-206	pstS	-	-	P	ko:K02040	ko02010,ko02020,ko05152,map02010,map02020,map05152	ko00000,ko00001,ko00002,ko02000	Phosphate
CMLPILML_00511	1.24e-216	pstC	-	-	P	ko:K02037	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	probably responsible for the translocation of the substrate across the membrane
CMLPILML_00512	2.05e-200	pstA	-	-	P	ko:K02038	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Phosphate transport system permease protein PstA
CMLPILML_00513	3.84e-190	pstB2	3.6.3.27	-	P	ko:K02036	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
CMLPILML_00514	2.13e-179	pstB1	3.6.3.27	-	P	ko:K02036	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
CMLPILML_00515	4.1e-152	phoU	-	-	P	ko:K02039	-	ko00000	Plays a role in the regulation of phosphate uptake
CMLPILML_00516	0.0	-	-	-	S	-	-	-	C4-dicarboxylate anaerobic carrier
CMLPILML_00517	1.15e-109	dps	-	-	P	ko:K04047	-	ko00000,ko03036	Belongs to the Dps family
CMLPILML_00519	1.58e-212	rbsK	2.7.1.15	-	H	ko:K00852	ko00030,map00030	ko00000,ko00001,ko01000	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CMLPILML_00520	8.05e-166	rpiA	5.3.1.6	-	G	ko:K01807	ko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
CMLPILML_00521	5.75e-224	rihC	3.2.2.1	-	F	ko:K01239,ko:K01250,ko:K12700	ko00230,ko00760,ko01100,map00230,map00760,map01100	ko00000,ko00001,ko01000	Nucleoside
CMLPILML_00522	2.4e-172	gntR	-	-	K	-	-	-	UbiC transcription regulator-associated domain protein
CMLPILML_00523	7.47e-70	-	-	-	S	-	-	-	Enterocin A Immunity
CMLPILML_00524	3.92e-178	-	-	-	K	ko:K22103	-	ko00000,ko03000	DeoR C terminal sensor domain
CMLPILML_00525	0.0	xfp	4.1.2.22, 4.1.2.9	-	G	ko:K01621	ko00030,ko00710,ko01100,ko01120,map00030,map00710,map01100,map01120	ko00000,ko00001,ko01000	Phosphoketolase
CMLPILML_00526	1.24e-153	-	-	-	C	-	-	-	nitroreductase
CMLPILML_00527	8.05e-171	-	-	-	-	-	-	-	-
CMLPILML_00528	0.0	yhdP	-	-	S	-	-	-	Transporter associated domain
CMLPILML_00529	1.22e-132	hpt	2.4.2.8	-	F	ko:K00760	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the purine pyrimidine phosphoribosyltransferase family
CMLPILML_00530	2.29e-299	-	-	-	E	ko:K03294	-	ko00000	amino acid
CMLPILML_00531	3.55e-176	lys	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
CMLPILML_00532	1.35e-278	yfmL	-	-	L	-	-	-	DEAD DEAH box helicase
CMLPILML_00533	0.0	chbC	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
CMLPILML_00536	1.64e-277	mnaA	5.1.3.14	-	G	ko:K01791	ko00520,ko01100,ko05111,map00520,map01100,map05111	ko00000,ko00001,ko00002,ko01000,ko01005	Belongs to the UDP-N-acetylglucosamine 2-epimerase family
CMLPILML_00537	3.13e-113	gtcA1	-	-	S	-	-	-	Teichoic acid glycosylation protein
CMLPILML_00538	4.75e-101	ykuP	-	-	C	ko:K03839	-	ko00000	Flavodoxin
CMLPILML_00539	2.09e-207	map	3.4.11.18	-	E	ko:K01265	-	ko00000,ko01000,ko01002	Methionine Aminopeptidase
CMLPILML_00540	6.47e-214	rbn	-	-	S	ko:K07058	-	ko00000	Belongs to the UPF0761 family
CMLPILML_00541	1.94e-217	galU	2.7.7.9	-	M	ko:K00963	ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	UTP-glucose-1-phosphate uridylyltransferase
CMLPILML_00542	3.18e-199	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
CMLPILML_00543	1.02e-230	proV	-	-	E	ko:K05847	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter, ATP-binding protein
CMLPILML_00544	0.0	-	-	-	EM	ko:K05845,ko:K05846	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Periplasmic glycine betaine choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)
CMLPILML_00545	4.54e-91	-	-	-	O	-	-	-	OsmC-like protein
CMLPILML_00546	1.52e-28	ltrA	-	-	S	-	-	-	Bacterial low temperature requirement A protein (LtrA)
CMLPILML_00547	2.97e-149	-	-	-	T	-	-	-	Region found in RelA / SpoT proteins
CMLPILML_00548	1.44e-149	dltr	-	-	K	-	-	-	response regulator
CMLPILML_00549	3.86e-300	sptS	-	-	T	-	-	-	Histidine kinase
CMLPILML_00550	0.0	pepX	3.4.14.11	-	E	ko:K01281	-	ko00000,ko01000,ko01002	Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
CMLPILML_00551	2.75e-74	-	-	-	-	-	-	-	-
CMLPILML_00552	8.93e-90	-	-	-	-	-	-	-	-
CMLPILML_00553	0.0	pepN	3.4.11.2	-	E	ko:K01256	ko00480,ko01100,map00480,map01100	ko00000,ko00001,ko01000,ko01002	aminopeptidase
CMLPILML_00554	1.1e-184	-	-	-	S	-	-	-	haloacid dehalogenase-like hydrolase
CMLPILML_00555	1.13e-158	-	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
CMLPILML_00557	0.0	glmS	2.6.1.16	-	M	ko:K00820	ko00250,ko00520,ko01100,ko01130,ko04931,map00250,map00520,map01100,map01130,map04931	ko00000,ko00001,ko01000,ko01002	Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
CMLPILML_00558	2.46e-95	-	-	-	-	-	-	-	-
CMLPILML_00559	6.22e-140	-	-	-	D	ko:K04095	-	ko00000,ko03036	Fic/DOC family
CMLPILML_00560	1.78e-289	-	-	-	I	-	-	-	transferase activity, transferring acyl groups other than amino-acyl groups
CMLPILML_00561	5.65e-277	-	-	-	S	-	-	-	Phage integrase family
CMLPILML_00563	5.91e-41	-	-	-	S	-	-	-	Domain of unknown function (DUF4393)
CMLPILML_00564	4.99e-48	-	-	-	-	-	-	-	-
CMLPILML_00565	2.19e-155	-	-	-	V	-	-	-	Abi-like protein
CMLPILML_00567	8.78e-26	-	-	-	S	-	-	-	Domain of unknown function (DUF4145)
CMLPILML_00569	1.3e-91	-	-	-	K	-	-	-	Peptidase S24-like
CMLPILML_00572	1.15e-22	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
CMLPILML_00573	1.18e-25	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
CMLPILML_00576	1.86e-133	-	-	-	K	ko:K07741	-	ko00000	BRO family, N-terminal domain
CMLPILML_00577	2.81e-40	-	-	-	-	-	-	-	-
CMLPILML_00580	7.4e-23	-	-	-	-	-	-	-	-
CMLPILML_00582	1.71e-41	-	-	-	-	-	-	-	-
CMLPILML_00585	1.84e-129	-	-	-	L	-	-	-	Psort location Cytoplasmic, score
CMLPILML_00590	9.73e-20	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
CMLPILML_00591	1.82e-32	-	-	-	-	-	-	-	-
CMLPILML_00600	1.16e-102	-	-	-	S	-	-	-	Phage transcriptional regulator, ArpU family
CMLPILML_00601	1.11e-112	-	-	-	S	-	-	-	HNH endonuclease
CMLPILML_00602	2.09e-85	-	-	-	L	-	-	-	Phage terminase, small subunit
CMLPILML_00603	3.76e-51	yoeB	-	-	S	ko:K19158	-	ko00000,ko01000,ko02048	YoeB-like toxin of bacterial type II toxin-antitoxin system
CMLPILML_00604	2.31e-48	-	-	-	D	ko:K19159	-	ko00000,ko02048	Antitoxin component of a toxin-antitoxin (TA) module
CMLPILML_00605	1.58e-305	-	-	-	S	-	-	-	Phage Terminase
CMLPILML_00607	1.91e-204	-	-	-	S	-	-	-	Phage portal protein
CMLPILML_00608	4.39e-144	-	-	-	S	-	-	-	Clp protease
CMLPILML_00609	2.92e-248	-	-	-	S	-	-	-	Phage capsid family
CMLPILML_00610	1.47e-52	-	-	-	S	-	-	-	Phage gp6-like head-tail connector protein
CMLPILML_00616	0.0	-	-	-	L	-	-	-	Phage tail tape measure protein TP901
CMLPILML_00617	9.36e-152	-	-	-	S	-	-	-	Phage tail protein
CMLPILML_00618	1.94e-241	-	-	-	S	-	-	-	Phage minor structural protein
CMLPILML_00619	4.62e-67	-	-	-	S	-	-	-	N-acetylmuramoyl-L-alanine amidase activity
CMLPILML_00625	3.38e-134	-	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
CMLPILML_00626	6.07e-14	-	-	-	-	-	-	-	-
CMLPILML_00627	2.83e-165	pnb	-	-	C	-	-	-	nitroreductase
CMLPILML_00628	5.18e-128	-	-	-	S	-	-	-	Domain of unknown function (DUF4811)
CMLPILML_00629	0.0	ycnB	-	-	U	-	-	-	Belongs to the major facilitator superfamily
CMLPILML_00630	4.6e-102	-	-	-	K	-	-	-	MerR HTH family regulatory protein
CMLPILML_00631	0.0	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
CMLPILML_00632	6.93e-81	-	-	-	S	ko:K07006	-	ko00000	Pyridoxamine 5'-phosphate oxidase
CMLPILML_00633	0.0	pepC4	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	Peptidase C1-like family
CMLPILML_00634	7.29e-215	-	-	-	GK	-	-	-	ROK family
CMLPILML_00635	1.12e-211	-	-	-	K	-	-	-	helix_turn_helix, arabinose operon control protein
CMLPILML_00636	8.33e-225	-	-	-	I	-	-	-	Carboxylesterase family
CMLPILML_00637	2.31e-264	-	-	-	P	-	-	-	Major Facilitator Superfamily
CMLPILML_00638	0.0	-	-	-	S	-	-	-	Predicted membrane protein (DUF2207)
CMLPILML_00639	4.63e-74	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
CMLPILML_00640	1.59e-77	-	-	-	-	-	-	-	-
CMLPILML_00641	3.41e-193	pdxK	2.7.1.35	-	H	ko:K00868	ko00750,ko01100,map00750,map01100	ko00000,ko00001,ko01000	Phosphomethylpyrimidine kinase
CMLPILML_00642	4.96e-121	-	-	-	S	-	-	-	ECF-type riboflavin transporter, S component
CMLPILML_00643	4.18e-38	dmpI	5.3.2.6	-	G	ko:K01821	ko00362,ko00621,ko00622,ko01100,ko01120,ko01220,map00362,map00621,map00622,map01100,map01120,map01220	ko00000,ko00001,ko00002,ko01000	Belongs to the 4-oxalocrotonate tautomerase family
CMLPILML_00644	4.08e-18	-	-	-	-	-	-	-	-
CMLPILML_00645	2.59e-313	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2325)
CMLPILML_00646	1.89e-192	-	-	-	S	-	-	-	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CMLPILML_00647	1.23e-84	yusI	1.20.4.1	-	P	ko:K00537	-	ko00000,ko01000	Belongs to the ArsC family
CMLPILML_00648	1.67e-66	rplU	-	-	J	ko:K02888	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein binds to 23S rRNA in the presence of protein L20
CMLPILML_00649	9.89e-64	rpmA	-	-	J	ko:K02899	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL27 family
CMLPILML_00650	1.56e-257	pepP	3.4.11.9, 3.4.13.9	-	E	ko:K01262,ko:K01271	-	ko00000,ko01000,ko01002	Creatinase/Prolidase N-terminal domain
CMLPILML_00651	6.05e-133	efp	-	-	J	ko:K02356	-	ko00000,ko03012	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
CMLPILML_00652	1.47e-95	WQ51_04310	-	-	S	ko:K10947	-	ko00000,ko03000	Asp23 family, cell envelope-related function
CMLPILML_00653	1.42e-88	nusB	-	-	K	ko:K03625	-	ko00000,ko03009,ko03021	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
CMLPILML_00654	2.23e-197	folD	1.5.1.5, 3.5.4.9	-	F	ko:K01491	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
CMLPILML_00655	0.0	xseA	3.1.11.6	-	L	ko:K03601	ko03430,map03430	ko00000,ko00001,ko01000,ko03400	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
CMLPILML_00656	1.93e-46	xseB	3.1.11.6	-	L	ko:K03602	ko03430,map03430	ko00000,ko00001,ko01000,ko03400	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
CMLPILML_00657	1.71e-204	ispA	2.5.1.1, 2.5.1.10, 2.5.1.29	-	H	ko:K13789	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko01006	Belongs to the FPP GGPP synthase family
CMLPILML_00658	1.85e-199	rrmJ	2.1.1.226, 2.1.1.227	-	J	ko:K06442	-	ko00000,ko01000,ko03009	Ribosomal RNA large subunit methyltransferase J
CMLPILML_00659	0.0	recN	-	-	L	ko:K03631	-	ko00000,ko03400	May be involved in recombinational repair of damaged DNA
CMLPILML_00660	8.55e-64	-	-	-	-	-	-	-	-
CMLPILML_00661	5.97e-145	gmk	2.7.4.8	-	F	ko:K00942	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko00002,ko01000	Essential for recycling GMP and indirectly, cGMP
CMLPILML_00662	1.63e-43	rpoZ	2.7.7.6	-	K	ko:K03060	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
CMLPILML_00663	0.0	priA	-	-	L	ko:K04066	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
CMLPILML_00664	8.3e-225	fmt	2.1.2.9	-	J	ko:K00604	ko00670,ko00970,map00670,map00970	ko00000,ko00001,ko01000	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
CMLPILML_00665	1.55e-310	sun	2.1.1.176	-	J	ko:K03500	-	ko00000,ko01000,ko03009	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
CMLPILML_00666	2.6e-180	stp	3.1.3.16	-	T	ko:K20074	-	ko00000,ko01000,ko01009	phosphatase
CMLPILML_00667	0.0	prkC	2.7.11.1	-	KLT	ko:K08884,ko:K12132	-	ko00000,ko01000,ko01001	serine threonine protein kinase
CMLPILML_00668	9.56e-211	rsgA	3.1.3.100	-	S	ko:K06949	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000,ko03009	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
CMLPILML_00669	1.11e-155	rpe	5.1.3.1	-	G	ko:K01783	ko00030,ko00040,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the ribulose-phosphate 3-epimerase family
CMLPILML_00670	4.49e-158	thiN	2.7.6.2	-	H	ko:K00949	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000	thiamine pyrophosphokinase
CMLPILML_00671	9.04e-34	rpmB	-	-	J	ko:K02902	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL28 family
CMLPILML_00672	8.29e-75	yloU	-	-	S	-	-	-	Asp23 family, cell envelope-related function
CMLPILML_00673	0.0	yloV	-	-	S	ko:K07030	-	ko00000	DAK2 domain fusion protein YloV
CMLPILML_00674	0.0	recG	3.6.4.12	-	L	ko:K03655	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
CMLPILML_00675	1.01e-234	plsX	2.3.1.15	-	I	ko:K03621	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
CMLPILML_00676	6.2e-48	acpP	-	-	IQ	ko:K02078	-	ko00000,ko00001	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CMLPILML_00677	4.35e-244	oppD	-	-	P	ko:K02031	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
CMLPILML_00678	2.91e-229	oppF	-	-	P	ko:K02032	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
CMLPILML_00679	3.16e-232	oppB	-	-	P	ko:K02033,ko:K02034	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
CMLPILML_00680	2.73e-209	oppC5	-	-	P	ko:K02034	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
CMLPILML_00681	0.0	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
CMLPILML_00682	2.49e-261	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
CMLPILML_00683	3.29e-110	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
CMLPILML_00684	5.24e-159	rnc	3.1.26.3	-	J	ko:K03685	ko03008,ko05205,map03008,map05205	ko00000,ko00001,ko01000,ko03009,ko03019,ko03036	Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
CMLPILML_00685	0.0	smc	-	-	D	ko:K03529	-	ko00000,ko03036	Required for chromosome condensation and partitioning
CMLPILML_00686	1.78e-241	ftsY	-	-	U	ko:K03110	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
CMLPILML_00687	0.0	pepD2	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
CMLPILML_00688	2.45e-75	ylxM	-	-	S	ko:K09787	-	ko00000	Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
CMLPILML_00689	4.67e-290	ffh	3.6.5.4	-	U	ko:K03106	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko01000,ko02044	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
CMLPILML_00690	1.37e-59	rpsP	-	-	J	ko:K02959	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Belongs to the bacterial ribosomal protein bS16 family
CMLPILML_00691	8.79e-125	rimM	-	-	J	ko:K02860	-	ko00000,ko03009	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
CMLPILML_00692	3.13e-175	trmD	2.1.1.228	-	J	ko:K00554	-	ko00000,ko01000,ko03016	Belongs to the RNA methyltransferase TrmD family
CMLPILML_00693	2.61e-76	rplS	-	-	J	ko:K02884	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
CMLPILML_00694	3.68e-151	sipS3	3.4.21.89	-	U	ko:K03100	ko02024,ko03060,map02024,map03060	ko00000,ko00001,ko01000,ko01002	Belongs to the peptidase S26 family
CMLPILML_00695	1.68e-98	apfA	3.6.1.61	-	F	ko:K18445	ko00230,map00230	ko00000,ko00001,ko01000	Nudix hydrolase
CMLPILML_00696	1.35e-149	ung2	3.2.2.27	-	L	ko:K21929	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Uracil-DNA glycosylase
CMLPILML_00697	3.88e-147	lexA	3.4.21.88	-	K	ko:K01356	-	ko00000,ko00002,ko01000,ko01002,ko03400	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
CMLPILML_00698	9.78e-46	ynzC	-	-	S	-	-	-	UPF0291 protein
CMLPILML_00699	3.41e-41	XK26_06720	-	-	S	ko:K09976	-	ko00000	Uncharacterised protein family (UPF0154)
CMLPILML_00700	0.0	mdlA	-	-	V	ko:K06148,ko:K18889	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
CMLPILML_00701	0.0	mdlB	-	-	V	ko:K06147,ko:K18890	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
CMLPILML_00702	1.31e-286	cfa	2.1.1.79	-	M	ko:K00574	-	ko00000,ko01000	cyclopropane-fatty-acyl-phospholipid synthase
CMLPILML_00703	3.62e-151	plsC	2.3.1.51	-	I	ko:K00655	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Acyltransferase
CMLPILML_00704	1.87e-249	yabB	2.1.1.223	-	L	ko:K07461,ko:K15460	-	ko00000,ko01000,ko03016	Methyltransferase small domain
CMLPILML_00705	1.07e-180	rpsB	-	-	J	ko:K02967	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uS2 family
CMLPILML_00706	4.15e-234	tsf	-	-	J	ko:K02357	-	ko00000,ko03012,ko03029	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
CMLPILML_00707	7.13e-169	pyrH	2.7.4.22	-	F	ko:K09903	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphorylation of UMP to UDP
CMLPILML_00708	2.87e-120	frr	-	-	J	ko:K02838	-	ko00000,ko03012	Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
CMLPILML_00709	1.7e-175	uppS	2.5.1.31	-	H	ko:K00806	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
CMLPILML_00710	3.37e-178	cdsA	2.7.7.41	-	S	ko:K00981	ko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070	ko00000,ko00001,ko00002,ko01000	Belongs to the CDS family
CMLPILML_00711	3.14e-293	rseP	-	-	M	ko:K11749	ko02024,ko04112,map02024,map04112	ko00000,ko00001,ko01000,ko01002	zinc metalloprotease
CMLPILML_00712	0.0	proS	6.1.1.15	-	J	ko:K01881	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
CMLPILML_00713	0.0	polC	2.7.7.7	-	L	ko:K03763	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
CMLPILML_00714	2.25e-107	rimP	-	-	J	ko:K09748	-	ko00000,ko03009	Required for maturation of 30S ribosomal subunits
CMLPILML_00715	6.72e-277	nusA	-	-	K	ko:K02600	-	ko00000,ko03009,ko03021	Participates in both transcription termination and antitermination
CMLPILML_00716	2.17e-62	ylxR	-	-	K	ko:K07742	-	ko00000	Protein of unknown function (DUF448)
CMLPILML_00717	2.2e-62	-	-	-	J	-	-	-	ribosomal protein
CMLPILML_00718	0.0	infB	-	-	J	ko:K02519	-	ko00000,ko03012,ko03029	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
CMLPILML_00719	6.74e-80	rbfA	-	-	J	ko:K02834	-	ko00000,ko03009	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
CMLPILML_00720	2.1e-214	truB	5.4.99.25	-	J	ko:K03177,ko:K03483	-	ko00000,ko01000,ko03000,ko03016	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
CMLPILML_00721	4.29e-226	ribF	2.7.1.26, 2.7.7.2	-	H	ko:K11753	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Belongs to the ribF family
CMLPILML_00722	0.0	yjcA	-	-	S	ko:K19350	ko02010,map02010	ko00000,ko00001,ko01504,ko02000	ABC transporter
CMLPILML_00723	1.71e-155	-	-	-	S	-	-	-	GyrI-like small molecule binding domain
CMLPILML_00724	4.59e-248	hrcA	-	-	K	ko:K03705	-	ko00000,ko03000	Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
CMLPILML_00725	9.65e-111	grpE	-	-	O	ko:K03687	-	ko00000,ko03029,ko03110	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
CMLPILML_00726	0.0	dnaK	-	-	O	ko:K04043	ko03018,ko04212,ko05152,map03018,map04212,map05152	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	Heat shock 70 kDa protein
CMLPILML_00727	9.97e-252	dnaJ	-	-	O	ko:K03686	-	ko00000,ko03029,ko03110	ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
CMLPILML_00728	0.0	lepA	-	-	M	ko:K03596	ko05134,map05134	ko00000,ko00001	Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
CMLPILML_00729	6.6e-159	srtA	3.4.22.70	-	M	ko:K07284	-	ko00000,ko01000,ko01002,ko01011	sortase family
CMLPILML_00730	0.0	recJ	-	-	L	ko:K07462	ko03410,ko03430,ko03440,map03410,map03430,map03440	ko00000,ko00001,ko01000,ko03400	Single-stranded-DNA-specific exonuclease RecJ
CMLPILML_00731	1.02e-124	apt	2.4.2.7	-	F	ko:K00759	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000,ko04147	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
CMLPILML_00732	0.0	potE	-	-	E	-	-	-	Amino Acid
CMLPILML_00733	0.0	cls	-	-	I	ko:K06131	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CMLPILML_00734	1.21e-244	thyA	2.1.1.45	-	F	ko:K00560	ko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523	ko00000,ko00001,ko00002,ko01000	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
CMLPILML_00735	3.2e-126	folA	1.5.1.3	-	H	ko:K00287	ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523	ko00000,ko00001,ko00002,ko01000	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
CMLPILML_00736	0.0	-	-	-	G	ko:K16211	-	ko00000,ko02000	Major Facilitator
CMLPILML_00737	0.0	-	-	-	P	-	-	-	Cation transporter/ATPase, N-terminus
CMLPILML_00738	4.36e-204	lysR5	-	-	K	-	-	-	LysR substrate binding domain
CMLPILML_00740	5.12e-132	-	-	-	I	-	-	-	PAP2 superfamily
CMLPILML_00741	6.08e-312	eno	4.2.1.11	-	G	ko:K01689	ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066	ko00000,ko00001,ko00002,ko01000,ko03019,ko04147	Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
CMLPILML_00742	9.84e-41	-	-	-	S	-	-	-	Sugar efflux transporter for intercellular exchange
CMLPILML_00743	0.0	ykpA	-	-	S	-	-	-	ABC transporter, ATP-binding protein
CMLPILML_00744	4.03e-64	-	-	-	K	-	-	-	Helix-turn-helix domain
CMLPILML_00745	1.33e-194	-	-	-	F	ko:K15051	-	ko00000	DNA/RNA non-specific endonuclease
CMLPILML_00746	5.81e-125	-	-	-	L	-	-	-	nuclease
CMLPILML_00747	5.71e-201	metQ	-	-	P	ko:K02073	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the nlpA lipoprotein family
CMLPILML_00748	9.17e-242	metN	-	-	P	ko:K02071	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
CMLPILML_00749	2.57e-126	metI	-	-	P	ko:K02072	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
CMLPILML_00750	0.0	fumC	4.2.1.2	-	C	ko:K01679	ko00020,ko00620,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko04934,ko05200,ko05211,map00020,map00620,map00720,map01100,map01110,map01120,map01130,map01200,map04934,map05200,map05211	ko00000,ko00001,ko00002,ko01000	Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
CMLPILML_00751	0.0	frdA	1.3.5.4	-	C	ko:K00244	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	ko00000,ko00001,ko00002,ko01000	FAD binding domain
CMLPILML_00752	1.54e-217	ldh	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	Belongs to the LDH MDH superfamily. LDH family
CMLPILML_00753	0.0	-	-	-	S	-	-	-	Putative threonine/serine exporter
CMLPILML_00754	4.36e-242	ansA	3.5.1.1	-	EJ	ko:K01424	ko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110	ko00000,ko00001,ko01000	L-asparaginase, type I
CMLPILML_00755	0.0	aha1	-	-	P	ko:K12952	-	ko00000,ko01000	E1-E2 ATPase
CMLPILML_00756	0.0	-	-	-	S	-	-	-	Bacterial membrane protein, YfhO
CMLPILML_00757	1.7e-113	ybaK	-	-	S	ko:K03976	-	ko00000,ko01000,ko03016	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
CMLPILML_00758	4.27e-223	prmA	-	-	J	ko:K02687	-	ko00000,ko01000,ko03009	Ribosomal protein L11 methyltransferase
CMLPILML_00759	2.32e-86	-	-	-	-	-	-	-	-
CMLPILML_00760	0.0	relA	2.7.6.5	-	KT	ko:K00951	ko00230,map00230	ko00000,ko00001,ko01000	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
CMLPILML_00761	2.88e-96	dtd	-	-	J	ko:K07560	-	ko00000,ko01000,ko03016	rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
CMLPILML_00762	4.28e-312	hisS	6.1.1.21	-	J	ko:K01892	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	histidyl-tRNA synthetase
CMLPILML_00763	0.0	aspS	6.1.1.12	-	J	ko:K01876	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
CMLPILML_00764	3.8e-118	-	-	-	-	-	-	-	-
CMLPILML_00765	1.22e-107	-	3.6.1.55	-	F	ko:K03574	-	ko00000,ko01000,ko03400	NUDIX domain
CMLPILML_00766	3.4e-58	-	-	-	-	-	-	-	-
CMLPILML_00767	2.11e-89	-	-	-	-	-	-	-	-
CMLPILML_00768	4.27e-85	-	-	-	S	-	-	-	Domain of unknown function DUF1828
CMLPILML_00769	2.98e-140	-	-	-	S	-	-	-	Rib/alpha-like repeat
CMLPILML_00770	4.62e-316	yagE	-	-	E	-	-	-	amino acid
CMLPILML_00771	4.45e-150	-	-	-	GM	-	-	-	NmrA-like family
CMLPILML_00772	3.3e-137	apl	3.1.3.1	-	S	ko:K01077	ko00730,ko00790,ko01100,ko02020,map00730,map00790,map01100,map02020	ko00000,ko00001,ko00002,ko00537,ko01000,ko04147	SNARE associated Golgi protein
CMLPILML_00773	1.01e-222	iunH	3.2.2.1	-	F	ko:K01239	ko00230,ko00760,ko01100,map00230,map00760,map01100	ko00000,ko00001,ko01000	inosine-uridine preferring nucleoside hydrolase
CMLPILML_00774	0.0	uvrC	-	-	L	ko:K03703	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
CMLPILML_00775	1.08e-305	obg	-	-	S	ko:K03979	-	ko00000,ko01000,ko03009	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
CMLPILML_00776	0.0	oatA	-	-	I	-	-	-	Acyltransferase
CMLPILML_00777	3.39e-226	rnz	3.1.26.11	-	J	ko:K00784	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
CMLPILML_00778	5.02e-185	-	-	-	S	ko:K07124	-	ko00000	Belongs to the short-chain dehydrogenases reductases (SDR) family
CMLPILML_00779	1.1e-62	-	-	-	S	-	-	-	Lipopolysaccharide assembly protein A domain
CMLPILML_00780	5.51e-38	rpmF	-	-	J	ko:K02911	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Belongs to the bacterial ribosomal protein bL32 family
CMLPILML_00781	0.0	yfkN	3.1.3.6, 3.1.4.16	-	F	ko:K01119	ko00230,ko00240,map00230,map00240	ko00000,ko00001,ko01000	Belongs to the 5'-nucleotidase family
CMLPILML_00782	1.57e-37	-	-	-	S	-	-	-	Protein of unknown function (DUF2929)
CMLPILML_00783	0.0	dnaE	2.7.7.7	-	L	ko:K02337	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase
CMLPILML_00785	1.19e-231	pfkA	2.7.1.11	-	F	ko:K00850	ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04152,ko05230,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04152,map05230	ko00000,ko00001,ko00002,ko01000,ko01009,ko03019	Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
CMLPILML_00786	0.0	pyk	2.7.1.40	-	G	ko:K00873	ko00010,ko00230,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko04930,ko05165,ko05203,ko05230,map00010,map00230,map00620,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map04930,map05165,map05203,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Belongs to the pyruvate kinase family
CMLPILML_00787	1.65e-211	yitL	-	-	S	ko:K00243	-	ko00000	S1 domain
CMLPILML_00788	1.17e-218	xerD	-	-	D	ko:K04763	-	ko00000,ko03036	recombinase XerD
CMLPILML_00789	5.61e-82	ribT	-	-	K	ko:K02859	-	ko00000	acetyltransferase
CMLPILML_00790	5.22e-174	scpA	-	-	D	ko:K05896	-	ko00000,ko03036	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
CMLPILML_00791	3.57e-136	scpB	-	-	D	ko:K06024	-	ko00000,ko03036	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
CMLPILML_00792	8.87e-168	rluB	5.4.99.22	-	J	ko:K06178	-	ko00000,ko01000,ko03009	Belongs to the pseudouridine synthase RsuA family
CMLPILML_00793	1.39e-94	-	-	-	M	-	-	-	Lysin motif
CMLPILML_00794	7.54e-126	ribU	-	-	U	-	-	-	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
CMLPILML_00795	1.03e-151	cmk	2.7.4.25	-	F	ko:K00945	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the cytidylate kinase family. Type 1 subfamily
CMLPILML_00796	5.27e-280	rpsA	-	-	J	ko:K02945	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein S1
CMLPILML_00797	1.6e-306	der	-	-	S	ko:K03977	-	ko00000,ko03009	GTPase that plays an essential role in the late steps of ribosome biogenesis
CMLPILML_00798	7.91e-55	hup	-	-	L	ko:K03530	-	ko00000,ko03032,ko03036,ko03400	Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
CMLPILML_00799	1.27e-296	XK27_05225	-	-	S	-	-	-	Tetratricopeptide repeat protein
CMLPILML_00800	1.2e-182	XK27_08840	-	-	U	ko:K05832	-	ko00000,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
CMLPILML_00801	1.55e-174	XK27_08845	-	-	S	ko:K05833	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
CMLPILML_00802	0.0	-	-	-	E	-	-	-	amino acid
CMLPILML_00803	1.28e-54	rpmE	-	-	J	ko:K02909	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L31
CMLPILML_00804	0.0	murF	6.3.2.10	-	M	ko:K01929	ko00300,ko00550,ko01100,ko01502,map00300,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
CMLPILML_00805	0.0	cshA	3.6.4.13	-	F	ko:K05592	ko03018,map03018	ko00000,ko00001,ko01000,ko03009,ko03019	DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
CMLPILML_00806	3.03e-80	acpS	2.7.8.7	-	I	ko:K00997	ko00770,map00770	ko00000,ko00001,ko01000	Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
CMLPILML_00807	1.69e-278	alr	5.1.1.1, 5.1.1.5	-	E	ko:K01775,ko:K20707	ko00473,ko01100,ko01502,map00473,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
CMLPILML_00808	5.46e-161	-	-	-	S	-	-	-	(CBS) domain
CMLPILML_00809	2.31e-231	ldh	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	Belongs to the LDH MDH superfamily. LDH family
CMLPILML_00810	2.68e-134	pth	3.1.1.29	-	J	ko:K01056	-	ko00000,ko01000,ko03012	The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
CMLPILML_00811	0.0	mfd	-	-	L	ko:K03723	ko03420,map03420	ko00000,ko00001,ko01000,ko03400	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
CMLPILML_00812	8.68e-47	yabO	-	-	J	-	-	-	S4 domain protein
CMLPILML_00813	5.29e-78	divIC	-	-	D	ko:K13052	-	ko00000,ko03036	Septum formation initiator
CMLPILML_00814	3.27e-80	-	-	-	J	ko:K07571	-	ko00000	S1 RNA binding domain
CMLPILML_00815	0.0	tilS	2.4.2.8, 6.3.4.19	-	J	ko:K04075,ko:K15780	ko00230,ko01100,ko01110,map00230,map01100,map01110	ko00000,ko00001,ko01000,ko03016	Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
CMLPILML_00816	0.0	ftsH	-	-	O	ko:K03798	-	ko00000,ko00002,ko01000,ko01002,ko03110	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
CMLPILML_00817	0.0	-	-	-	S	-	-	-	membrane
CMLPILML_00818	1.66e-207	hslO	-	-	O	ko:K04083	-	ko00000,ko03110	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
CMLPILML_00819	1.36e-245	dus	-	-	J	ko:K05540	-	ko00000,ko01000,ko03016	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
CMLPILML_00820	0.0	lysS	6.1.1.6	-	J	ko:K04567	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-II aminoacyl-tRNA synthetase family
CMLPILML_00823	0.0	clpC	-	-	O	ko:K03696	ko01100,map01100	ko00000,ko03110	Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
CMLPILML_00824	0.0	rpoB	2.7.7.6	-	K	ko:K03043	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
CMLPILML_00825	0.0	rpoC	2.7.7.6	-	K	ko:K03046	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
CMLPILML_00826	1.28e-154	comC	3.4.23.43	-	NOU	ko:K02236	-	ko00000,ko00002,ko01000,ko02044	Bacterial Peptidase A24 N-terminal domain
CMLPILML_00827	3.6e-92	rpsL	-	-	J	ko:K02950	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
CMLPILML_00828	1.14e-105	rpsG	-	-	J	ko:K02992	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
CMLPILML_00829	0.0	fusA	-	-	J	ko:K02355	-	ko00000,ko03012,ko03029	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
CMLPILML_00830	6.34e-66	rpsJ	-	-	J	ko:K02946	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Involved in the binding of tRNA to the ribosomes
CMLPILML_00831	5.06e-144	rplC	-	-	J	ko:K02906	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
CMLPILML_00832	3.16e-136	rplD	-	-	J	ko:K02926	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the polypeptide exit tunnel
CMLPILML_00833	7.29e-61	rplW	-	-	J	ko:K02892	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
CMLPILML_00834	4.88e-199	rplB	-	-	J	ko:K02886	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
CMLPILML_00835	6.08e-63	rpsS	-	-	J	ko:K02965	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
CMLPILML_00836	9.07e-73	rplV	-	-	J	ko:K02890	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
CMLPILML_00837	7.46e-157	rpsC	-	-	J	ko:K02982	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
CMLPILML_00838	4.26e-98	rplP	-	-	J	ko:K02878	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
CMLPILML_00839	2.92e-34	rpmC	-	-	J	ko:K02904	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uL29 family
CMLPILML_00840	7.74e-56	rpsQ	-	-	J	ko:K02961	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
CMLPILML_00841	6.02e-78	rplN	-	-	J	ko:K02874	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
CMLPILML_00842	1.67e-46	rplX	-	-	J	ko:K02895	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
CMLPILML_00843	4.3e-124	rplE	-	-	J	ko:K02931	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
CMLPILML_00844	1.73e-40	rpsN	-	-	J	ko:K02954	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
CMLPILML_00845	1.32e-88	rpsH	-	-	J	ko:K02994	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
CMLPILML_00846	6.14e-122	rplF	-	-	J	ko:K02933	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
CMLPILML_00847	1.09e-74	rplR	-	-	J	ko:K02881	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
CMLPILML_00848	9.33e-107	rpsE	-	-	J	ko:K02988	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
CMLPILML_00849	3.44e-33	rpmD	-	-	J	ko:K02907	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L30
CMLPILML_00850	8.21e-92	rplO	-	-	J	ko:K02876	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to the 23S rRNA
CMLPILML_00851	2.42e-299	secY	-	-	U	ko:K03076	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
CMLPILML_00852	4.87e-155	adk	2.7.4.3	-	F	ko:K00939	ko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
CMLPILML_00853	4.46e-46	infA	-	-	J	ko:K02518	-	ko00000,ko03012	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
CMLPILML_00854	1.89e-21	rpmJ	-	-	J	ko:K02919	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL36 family
CMLPILML_00855	1.92e-73	rpsM	-	-	J	ko:K02952	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
CMLPILML_00856	4.46e-81	rpsK	-	-	J	ko:K02948	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
CMLPILML_00857	2.19e-219	rpoA	2.7.7.6	-	K	ko:K03040	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
CMLPILML_00858	3.85e-81	rplQ	-	-	J	ko:K02879	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L17
CMLPILML_00859	1.1e-200	ecfA1	-	-	P	ko:K16786	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
CMLPILML_00860	1.86e-208	ecfA2	-	-	P	ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
CMLPILML_00861	2.19e-180	ecfT	-	-	U	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
CMLPILML_00862	8.78e-195	truA	5.4.99.12	-	J	ko:K06173	-	ko00000,ko01000,ko03016	Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
CMLPILML_00863	7.82e-102	rplM	-	-	J	ko:K02871	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
CMLPILML_00864	7.96e-85	rpsI	-	-	J	ko:K02996	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uS9 family
CMLPILML_00865	1.8e-104	-	-	-	-	-	-	-	-
CMLPILML_00866	5.1e-206	-	-	-	GM	-	-	-	NmrA-like family
CMLPILML_00867	1.27e-141	-	3.5.1.124	-	S	ko:K03152	-	ko00000,ko01000,ko01002	DJ-1/PfpI family
CMLPILML_00868	1.83e-165	-	-	-	G	-	-	-	Belongs to the phosphoglycerate mutase family
CMLPILML_00869	5.56e-70	czrA	-	-	K	ko:K22043	-	ko00000,ko03000	Transcriptional regulator, ArsR family
CMLPILML_00870	5.88e-199	-	-	-	P	ko:K16264	-	ko00000,ko02000	cation diffusion facilitator family transporter
CMLPILML_00871	2.66e-56	-	-	-	-	-	-	-	-
CMLPILML_00872	1.33e-35	-	-	-	-	-	-	-	-
CMLPILML_00873	5.21e-164	gpmA1	5.4.2.11	-	G	ko:K01834	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
CMLPILML_00874	1.2e-236	-	-	-	S	-	-	-	AAA domain
CMLPILML_00875	0.0	pepC	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	Peptidase C1-like family
CMLPILML_00876	7.41e-131	dut	3.6.1.23	-	F	ko:K01520	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	dUTP diphosphatase
CMLPILML_00877	5.16e-221	radA	-	-	O	ko:K04485	-	ko00000,ko03400	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
CMLPILML_00878	1.17e-66	radA	-	-	O	ko:K04485	-	ko00000,ko03400	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
CMLPILML_00879	0.0	gltX	6.1.1.24	-	J	ko:K09698	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
CMLPILML_00880	0.0	cysS	6.1.1.16	-	J	ko:K01883	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-I aminoacyl-tRNA synthetase family
CMLPILML_00881	2.73e-102	mrnC	-	-	J	ko:K11145	-	ko00000,ko01000,ko03009	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
CMLPILML_00882	1.62e-179	trmH	2.1.1.185	-	J	ko:K03218	-	ko00000,ko01000,ko03009	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CMLPILML_00883	4.51e-199	lacT	-	-	K	ko:K02531	-	ko00000,ko03000	PRD domain
CMLPILML_00884	5.42e-75	lacF	2.7.1.196, 2.7.1.205, 2.7.1.207	-	G	ko:K02759,ko:K02786	ko00052,ko00500,ko01100,ko02060,map00052,map00500,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIA subunit
CMLPILML_00885	0.0	lacE	2.7.1.207	-	G	ko:K02787,ko:K02788	ko00052,ko01100,ko02060,map00052,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphotransferase system, EIIC
CMLPILML_00886	0.0	lacG	3.2.1.21, 3.2.1.85	-	G	ko:K01220,ko:K05350	ko00052,ko00460,ko00500,ko00940,ko01100,ko01110,map00052,map00460,map00500,map00940,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
CMLPILML_00887	3.38e-128	-	-	-	K	ko:K03091	-	ko00000,ko03021	sigma factor activity
CMLPILML_00888	1.19e-45	-	-	-	-	-	-	-	-
CMLPILML_00889	0.0	gntK	2.7.1.12	-	G	ko:K00851	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko01000	Belongs to the FGGY kinase family
CMLPILML_00890	6.78e-270	glxK	2.7.1.165	-	G	ko:K00865	ko00260,ko00561,ko00630,ko01100,ko01120,ko01130,map00260,map00561,map00630,map01100,map01120,map01130	ko00000,ko00001,ko01000	Belongs to the glycerate kinase type-1 family
CMLPILML_00891	0.0	dxs	2.2.1.7	-	H	ko:K01662	ko00730,ko00900,ko01100,ko01110,ko01130,map00730,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
CMLPILML_00892	8.29e-292	-	-	-	G	-	-	-	Major Facilitator Superfamily
CMLPILML_00893	6.02e-246	hepT	2.5.1.30, 2.5.1.83	-	H	ko:K00805,ko:K21275	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	Belongs to the FPP GGPP synthase family
CMLPILML_00894	1.48e-27	rpmG	-	-	J	ko:K02913	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL33 family
CMLPILML_00895	9.78e-18	secE	-	-	U	ko:K03073	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
CMLPILML_00896	2.58e-131	nusG	-	-	K	ko:K02601	-	ko00000,ko03009,ko03021	Participates in transcription elongation, termination and antitermination
CMLPILML_00897	2.69e-90	rplK	-	-	J	ko:K02867	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
CMLPILML_00898	6.1e-160	rplA	-	-	J	ko:K02863	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
CMLPILML_00899	5.35e-140	yecS_2	-	-	P	ko:K02029,ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter permease
CMLPILML_00900	5.25e-149	glnQ	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	ABC transporter
CMLPILML_00901	5.9e-188	aatB	-	-	ET	ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter substrate-binding protein
CMLPILML_00902	2.35e-126	rplJ	-	-	J	ko:K02864	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
CMLPILML_00903	3.25e-72	rplL	-	-	J	ko:K02935	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
CMLPILML_00904	1.02e-198	-	-	-	P	ko:K10716	-	ko00000,ko02000	Ion transport protein
CMLPILML_00905	3.25e-44	-	-	-	-	-	-	-	-
CMLPILML_00906	3.19e-145	rsmC	2.1.1.172	-	J	ko:K00564	-	ko00000,ko01000,ko03009	Methyltransferase
CMLPILML_00907	6.96e-33	-	-	-	-	-	-	-	-
CMLPILML_00908	2.52e-106	tadA	3.5.4.33	-	F	ko:K11991	-	ko00000,ko01000,ko03016	Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
CMLPILML_00909	0.0	dnaX	2.7.7.7	-	L	ko:K02343	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
CMLPILML_00910	9.41e-69	yaaK	-	-	S	ko:K09747	-	ko00000	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
CMLPILML_00911	1.53e-140	recR	-	-	L	ko:K06187	ko03440,map03440	ko00000,ko00001,ko03400	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
CMLPILML_00912	3.68e-45	-	-	-	S	-	-	-	Protein of unknown function (DUF2508)
CMLPILML_00913	7.09e-147	tmk	2.7.4.9	-	F	ko:K00943	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
CMLPILML_00914	8.23e-70	yaaQ	-	-	S	-	-	-	Cyclic-di-AMP receptor
CMLPILML_00915	1.39e-197	holB	2.7.7.7	-	L	ko:K02341	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III
CMLPILML_00916	3.89e-77	yabA	-	-	L	-	-	-	Involved in initiation control of chromosome replication
CMLPILML_00917	8.76e-201	rsmI	2.1.1.198	-	H	ko:K07056	-	ko00000,ko01000,ko03009	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
CMLPILML_00918	2.57e-168	fat	3.1.2.21	-	I	ko:K01071	ko00061,ko01100,map00061,map01100	ko00000,ko00001,ko01000,ko01004	Acyl-ACP thioesterase
CMLPILML_00919	8.12e-113	-	-	-	S	-	-	-	ECF transporter, substrate-specific component
CMLPILML_00920	3.02e-170	yeaZ	2.3.1.234	-	O	ko:K01409,ko:K14742	-	ko00000,ko01000,ko03016	Universal bacterial protein YeaZ
CMLPILML_00921	3.43e-127	rimI	2.3.1.128	-	K	ko:K03789	-	ko00000,ko01000,ko03009	Ribosomal-protein-alanine acetyltransferase
CMLPILML_00922	8.61e-251	tsaD	2.3.1.234	-	J	ko:K01409	-	ko00000,ko01000,ko03016	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
CMLPILML_00923	6.62e-11	-	-	-	D	-	-	-	nuclear chromosome segregation
CMLPILML_00924	2.34e-11	-	-	-	D	-	-	-	nuclear chromosome segregation
CMLPILML_00925	6.8e-219	-	-	-	-	-	-	-	-
CMLPILML_00926	1.29e-80	-	-	-	-	-	-	-	-
CMLPILML_00927	3.27e-306	eriC	-	-	P	ko:K03281	-	ko00000	chloride
CMLPILML_00928	1.49e-64	-	-	-	-	-	-	-	-
CMLPILML_00929	1.2e-128	-	-	-	S	-	-	-	Protein of unknown function (DUF3990)
CMLPILML_00930	8.5e-242	guaC	1.7.1.7	-	F	ko:K00364	ko00230,map00230	ko00000,ko00001,ko01000	Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
CMLPILML_00931	0.0	purA	6.3.4.4	-	F	ko:K01939	ko00230,ko00250,ko01100,map00230,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
CMLPILML_00932	3.38e-315	purB	4.3.2.2	-	F	ko:K01756	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
CMLPILML_00933	1.53e-102	apfA	3.6.1.61	-	F	ko:K18445	ko00230,map00230	ko00000,ko00001,ko01000	NUDIX domain
CMLPILML_00934	2.75e-64	-	-	-	L	ko:K07473	-	ko00000,ko02048	bacterial-type proximal promoter sequence-specific DNA binding
CMLPILML_00935	1.01e-71	-	-	-	S	ko:K19157	-	ko00000,ko01000,ko02048	Bacterial toxin of type II toxin-antitoxin system, YafQ
CMLPILML_00936	3.25e-298	bbsF_1	2.8.3.19	-	C	ko:K18702	-	ko00000,ko01000	Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
CMLPILML_00937	2.19e-196	-	-	-	K	-	-	-	helix_turn_helix, arabinose operon control protein
CMLPILML_00938	0.0	bglC1	3.2.1.21, 3.2.1.52	GH3	G	ko:K01207,ko:K05349	ko00460,ko00500,ko00520,ko00531,ko00940,ko01100,ko01110,ko01501,map00460,map00500,map00520,map00531,map00940,map01100,map01110,map01501	ko00000,ko00001,ko00002,ko01000	hydrolase, family 3
CMLPILML_00939	0.0	scrA5	2.7.1.211	-	G	ko:K02808,ko:K02809,ko:K02810	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
CMLPILML_00940	0.0	-	3.2.1.26	GH32	G	ko:K01193	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Glycosyl hydrolases family 32
CMLPILML_00941	6.18e-199	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
CMLPILML_00942	1.51e-100	-	-	-	-	-	-	-	-
CMLPILML_00943	0.0	ydiF	-	-	S	ko:K06158	-	ko00000,ko03012	ABC transporter, ATP-binding protein
CMLPILML_00944	1.45e-150	rex	-	-	K	ko:K01926	-	ko00000,ko03000	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
CMLPILML_00945	1.55e-133	-	3.2.2.10	-	S	ko:K06966	ko00230,ko00240,map00230,map00240	ko00000,ko00001,ko01000	Belongs to the LOG family
CMLPILML_00946	1.05e-102	-	-	-	K	-	-	-	LytTr DNA-binding domain
CMLPILML_00947	2.75e-167	-	-	-	S	-	-	-	membrane
CMLPILML_00948	3.69e-59	groS	-	-	O	ko:K04078	-	ko00000,ko03029,ko03110	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
CMLPILML_00949	0.0	groL	-	-	O	ko:K04077	ko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
CMLPILML_00950	5.96e-09	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
CMLPILML_00951	0.0	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
CMLPILML_00952	0.0	nisT	-	-	V	ko:K06147,ko:K20485	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko02000	ABC transporter
CMLPILML_00953	0.0	mutS	-	-	L	ko:K03555	ko03430,map03430	ko00000,ko00001,ko03400	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
CMLPILML_00954	0.0	mutL	-	-	L	ko:K03572	ko03430,map03430	ko00000,ko00001,ko03400	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
CMLPILML_00955	1.26e-131	ruvA	3.6.4.12	-	L	ko:K03550	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
CMLPILML_00956	1.16e-239	ruvB	3.6.4.12	-	L	ko:K03551	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
CMLPILML_00957	1.08e-67	yajC	-	-	U	ko:K03210	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Preprotein translocase
CMLPILML_00958	0.0	zwf	1.1.1.363, 1.1.1.49	-	G	ko:K00036	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,ko05230,map00030,map00480,map01100,map01110,map01120,map01130,map01200,map05230	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
CMLPILML_00959	1.79e-267	dinB	2.7.7.7	-	L	ko:K02346	-	ko00000,ko01000,ko03400	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
CMLPILML_00960	2.44e-234	nrnA	3.1.13.3, 3.1.3.7	-	S	ko:K06881	ko00920,ko01100,ko01120,map00920,map01100,map01120	ko00000,ko00001,ko01000,ko03400	DHHA1 domain protein
CMLPILML_00961	3.84e-299	cshB	3.6.4.13	-	JKL	ko:K05592,ko:K18692	ko03018,map03018	ko00000,ko00001,ko01000,ko03009,ko03019	DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
CMLPILML_00962	0.0	alaS	6.1.1.7	-	J	ko:K01872	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
CMLPILML_00963	1.08e-56	yrzL	-	-	S	-	-	-	Belongs to the UPF0297 family
CMLPILML_00964	1.01e-95	yrrK	-	-	J	ko:K07447	-	ko00000,ko01000	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
CMLPILML_00965	1.27e-66	yrzB	-	-	S	-	-	-	Belongs to the UPF0473 family
CMLPILML_00966	1.33e-118	cvpA	-	-	S	-	-	-	Colicin V production protein
CMLPILML_00967	0.0	mutS2	-	-	L	ko:K07456	ko03430,map03430	ko00000,ko00001,ko03400	Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
CMLPILML_00968	8.93e-71	trxA	-	-	O	ko:K03671	ko04621,ko05418,map04621,map05418	ko00000,ko00001,ko03110	Belongs to the thioredoxin family
CMLPILML_00969	2.57e-90	yslB	-	-	S	-	-	-	Protein of unknown function (DUF2507)
CMLPILML_00970	1.14e-186	murI	3.6.1.66, 5.1.1.3	-	M	ko:K01776,ko:K02428	ko00230,ko00471,ko01100,map00230,map00471,map01100	ko00000,ko00001,ko01000,ko01011	Provides the (R)-glutamate required for cell wall biosynthesis
CMLPILML_00971	4.91e-150	rdgB	3.6.1.66	-	F	ko:K02428	ko00230,map00230	ko00000,ko00001,ko01000	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
CMLPILML_00972	1.06e-280	ackA	2.7.2.1	-	F	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
CMLPILML_00973	1.51e-203	ykuT	-	-	M	ko:K16052,ko:K22044	-	ko00000,ko02000	mechanosensitive ion channel
CMLPILML_00974	2.54e-33	ytxG	-	-	S	-	-	-	protein containing a divergent version of the methyl-accepting chemotaxis-like domain
CMLPILML_00975	1.47e-67	-	-	-	-	-	-	-	-
CMLPILML_00976	1.54e-270	pepQ	3.4.13.9	-	E	ko:K01271	-	ko00000,ko01000,ko01002	Creatinase/Prolidase N-terminal domain
CMLPILML_00977	2.52e-229	ccpA	-	-	K	ko:K02529	-	ko00000,ko03000	catabolite control protein A
CMLPILML_00978	0.0	-	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter transmembrane region
CMLPILML_00979	0.0	pbp1B	2.4.1.129	GT51	M	ko:K03693,ko:K12551	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01003,ko01011	Penicillin binding protein transpeptidase domain
CMLPILML_00980	0.0	pepV	3.5.1.18	-	E	ko:K01270,ko:K01274,ko:K01439	ko00300,ko00480,ko01100,ko01120,ko01230,map00300,map00480,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000,ko01002	dipeptidase PepV
CMLPILML_00981	0.0	-	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	glycerophosphoryl diester phosphodiesterase
CMLPILML_00982	3.99e-74	-	-	-	-	-	-	-	-
CMLPILML_00983	0.0	sasH	3.1.3.5, 3.1.3.6, 3.1.4.16, 3.6.1.45	-	F	ko:K01081,ko:K01119,ko:K07004,ko:K08693,ko:K11751	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the 5'-nucleotidase family
CMLPILML_00984	1.44e-127	yutD	-	-	S	-	-	-	Protein of unknown function (DUF1027)
CMLPILML_00985	4.87e-190	nagD	3.1.3.41	-	G	ko:K01101	ko00627,ko01120,map00627,map01120	ko00000,ko00001,ko01000	Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
CMLPILML_00986	1.62e-135	-	-	-	S	-	-	-	Protein of unknown function (DUF1461)
CMLPILML_00987	1.45e-151	dedA	-	-	S	ko:K03975	-	ko00000	SNARE-like domain protein
CMLPILML_00988	2.17e-230	yumC	1.18.1.2, 1.19.1.1	-	C	ko:K21567	-	ko00000,ko01000	Ferredoxin--NADP reductase
CMLPILML_00989	2.37e-79	yugI	-	-	J	ko:K07570	-	ko00000	general stress protein
CMLPILML_00990	3e-82	-	-	-	M	-	-	-	Glycosyltransferase like family 2
CMLPILML_00991	5.7e-160	-	-	-	S	-	-	-	Alpha/beta hydrolase family
CMLPILML_00992	9.68e-83	-	-	-	-	-	-	-	-
CMLPILML_00993	7.71e-231	prs2	2.7.6.1	-	F	ko:K00948	ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
CMLPILML_00994	8.76e-283	-	-	-	S	-	-	-	CAAX protease self-immunity
CMLPILML_00995	4.1e-307	aapA	-	-	E	ko:K03293,ko:K11737	-	ko00000,ko02000	Amino acid permease
CMLPILML_00996	4.09e-126	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
CMLPILML_00997	8.47e-180	-	-	-	-	-	-	-	-
CMLPILML_00998	0.0	-	-	-	S	-	-	-	Cysteine-rich secretory protein family
CMLPILML_00999	6.59e-265	ddl	6.3.2.4	-	F	ko:K01921	ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Belongs to the D-alanine--D-alanine ligase family
CMLPILML_01000	1.03e-151	-	-	-	-	-	-	-	-
CMLPILML_01001	0.0	nhaP3	-	-	P	ko:K03316	-	ko00000	Sodium proton antiporter
CMLPILML_01002	1.02e-239	yibE	-	-	S	-	-	-	overlaps another CDS with the same product name
CMLPILML_01003	1.61e-155	yibF	-	-	S	-	-	-	overlaps another CDS with the same product name
CMLPILML_01004	6.44e-201	-	-	-	I	-	-	-	alpha/beta hydrolase fold
CMLPILML_01005	0.0	-	-	-	G	-	-	-	Belongs to the glycosyl hydrolase 31 family
CMLPILML_01006	2.04e-167	-	-	-	K	ko:K03710	-	ko00000,ko03000	UTRA
CMLPILML_01007	5.87e-276	agaS	-	-	G	ko:K02082	-	ko00000,ko01000	SIS domain
CMLPILML_01008	2.64e-291	nagA	3.5.1.25	-	G	ko:K01443	ko00520,ko01130,map00520,map01130	ko00000,ko00001,ko01000	Belongs to the metallo-dependent hydrolases superfamily. NagA family
CMLPILML_01009	5.59e-109	-	2.7.1.191	-	G	ko:K02794	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system sorbose subfamily IIB component
CMLPILML_01010	1.87e-196	-	-	-	G	ko:K02795	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	PTS system sorbose-specific iic component
CMLPILML_01011	2.13e-190	-	-	-	G	ko:K02796	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	PTS system mannose/fructose/sorbose family IID component
CMLPILML_01012	1.6e-89	-	2.7.1.191	-	G	ko:K02793	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system fructose IIA component
CMLPILML_01013	3.49e-23	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
CMLPILML_01014	8.35e-277	-	-	-	S	-	-	-	zinc-ribbon domain
CMLPILML_01015	4.51e-17	-	-	-	-	-	-	-	-
CMLPILML_01016	5.62e-216	-	-	-	-	-	-	-	-
CMLPILML_01017	3.82e-114	ntd	2.4.2.6	-	F	ko:K08728	ko00240,map00240	ko00000,ko00001,ko01000	Nucleoside
CMLPILML_01018	1.89e-129	-	2.7.1.200, 2.7.1.204	-	G	ko:K02773,ko:K20112	ko00052,ko01100,ko02060,map00052,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
CMLPILML_01019	4.26e-171	-	-	-	K	-	-	-	UTRA domain
CMLPILML_01020	3.05e-192	-	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Tyrosine phosphatase family
CMLPILML_01021	4.96e-113	usp5	-	-	T	-	-	-	universal stress protein
CMLPILML_01023	9.6e-217	phnD	-	-	P	ko:K02044	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Phosphonate ABC transporter
CMLPILML_01024	2.58e-181	phnC	3.6.3.28	-	P	ko:K02041	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
CMLPILML_01025	2.46e-169	phnB	-	-	P	ko:K02042	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
CMLPILML_01026	8.69e-189	-	-	-	P	ko:K02042	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
CMLPILML_01027	6.97e-107	-	-	-	-	-	-	-	-
CMLPILML_01028	0.0	-	-	-	S	-	-	-	Calcineurin-like phosphoesterase
CMLPILML_01029	0.0	asnB	6.3.5.4	-	E	ko:K01953	ko00250,ko01100,ko01110,map00250,map01100,map01110	ko00000,ko00001,ko01000,ko01002	Asparagine synthase
CMLPILML_01030	0.0	yxbA	6.3.1.12	-	S	ko:K17810	-	ko00000,ko01000	ATP-grasp enzyme
CMLPILML_01031	2.3e-83	-	-	-	-	-	-	-	-
CMLPILML_01032	0.0	nrdD	1.1.98.6	-	F	ko:K21636	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Ribonucleoside-triphosphate reductase
CMLPILML_01033	8.75e-177	nrdG	1.97.1.4	-	O	ko:K04068	-	ko00000,ko01000	Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
CMLPILML_01034	1.83e-134	yitW	-	-	S	-	-	-	Iron-sulfur cluster assembly protein
CMLPILML_01035	4.42e-292	XK27_04775	-	-	S	ko:K09155	-	ko00000	PAS domain
CMLPILML_01036	0.0	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
CMLPILML_01037	0.0	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
CMLPILML_01038	2.19e-290	yqjV	-	-	EGP	-	-	-	Major Facilitator Superfamily
CMLPILML_01039	9.39e-238	lacD	4.1.2.40	-	G	ko:K01635	ko00052,ko01100,ko02024,map00052,map01100,map02024	ko00000,ko00001,ko01000	Belongs to the aldolase LacD family
CMLPILML_01040	0.0	-	-	-	D	-	-	-	transport
CMLPILML_01041	9.83e-175	rpl	-	-	K	-	-	-	Helix-turn-helix domain, rpiR family
CMLPILML_01042	6.42e-210	fruK-1	2.7.1.56	-	H	ko:K00882	ko00051,map00051	ko00000,ko00001,ko01000	pfkB family carbohydrate kinase
CMLPILML_01043	0.0	fruC	2.7.1.202	-	GT	ko:K02769,ko:K02770	ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
CMLPILML_01044	0.0	pepO	-	-	O	ko:K07386	-	ko00000,ko01000,ko01002	Peptidase family M13
CMLPILML_01045	0.0	-	-	-	S	-	-	-	Bacterial membrane protein, YfhO
CMLPILML_01046	0.0	pckA	4.1.1.49	-	H	ko:K01610	ko00010,ko00020,ko00620,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00710,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Phosphoenolpyruvate carboxykinase
CMLPILML_01047	0.0	kup	-	-	P	ko:K03549	-	ko00000,ko02000	Transport of potassium into the cell
CMLPILML_01048	0.0	kup	-	-	P	ko:K03549	-	ko00000,ko02000	Transport of potassium into the cell
CMLPILML_01049	1.06e-95	-	-	-	-	-	-	-	-
CMLPILML_01050	1.47e-162	-	-	-	-	-	-	-	-
CMLPILML_01051	1.75e-39	-	-	-	-	-	-	-	-
CMLPILML_01052	3.38e-46	-	-	-	S	-	-	-	Protein of unknown function (DUF2922)
CMLPILML_01053	0.0	-	-	-	NU	-	-	-	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
CMLPILML_01054	0.0	lysA2	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
CMLPILML_01055	2.55e-185	-	2.7.1.56	-	G	ko:K00882	ko00051,map00051	ko00000,ko00001,ko01000	pfkB family carbohydrate kinase
CMLPILML_01056	0.0	yjbQ	-	-	P	ko:K03455,ko:K03499	-	ko00000,ko02000	TrkA C-terminal domain protein
CMLPILML_01057	6.12e-230	-	-	-	S	-	-	-	Oxidoreductase family, NAD-binding Rossmann fold
CMLPILML_01058	2.11e-175	-	-	-	-	-	-	-	-
CMLPILML_01059	3.41e-193	-	-	-	-	-	-	-	-
CMLPILML_01060	2.22e-97	XK27_04775	-	-	S	ko:K09155	-	ko00000	PAS domain
CMLPILML_01061	1.11e-171	gpmA	5.4.2.11	-	G	ko:K01834	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
CMLPILML_01062	4.38e-56	rpsN	-	-	J	ko:K02954	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
CMLPILML_01063	5.36e-92	-	-	-	S	-	-	-	GtrA-like protein
CMLPILML_01064	1.56e-227	yfdH	-	GT2	M	ko:K12999	-	ko00000,ko01000,ko01003,ko01005	Glycosyltransferase, group 2 family protein
CMLPILML_01065	7.1e-152	-	-	-	-	-	-	-	-
CMLPILML_01066	2.21e-195	-	-	-	U	ko:K05340	-	ko00000,ko02000	sugar transport
CMLPILML_01067	4.25e-219	-	-	-	G	-	-	-	Aldose 1-epimerase
CMLPILML_01068	3.28e-260	brpA	-	-	K	-	-	-	Cell envelope-like function transcriptional attenuator common domain protein
CMLPILML_01069	1.13e-145	plsY1	2.3.1.15	-	I	ko:K08591	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
CMLPILML_01070	0.0	XK27_08315	-	-	M	-	-	-	Sulfatase
CMLPILML_01071	9.21e-309	tyrS	6.1.1.1	-	J	ko:K01866	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
CMLPILML_01073	0.0	pepC1	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	aminopeptidase
CMLPILML_01074	2.24e-160	ypgQ	-	-	S	ko:K06950	-	ko00000	Metal dependent phosphohydrolases with conserved 'HD' motif.
CMLPILML_01075	0.0	pepE	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	aminopeptidase
CMLPILML_01076	8.46e-81	-	-	-	-	-	-	-	-
CMLPILML_01077	4.87e-101	greA	-	-	K	ko:K03624	-	ko00000,ko03021	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
CMLPILML_01078	1.47e-100	-	-	-	O	ko:K13993	ko04141,map04141	ko00000,ko00001,ko03110	Belongs to the small heat shock protein (HSP20) family
CMLPILML_01079	0.0	pbg4	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
CMLPILML_01080	2.08e-105	-	-	-	-	-	-	-	-
CMLPILML_01081	1.29e-315	celD	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
CMLPILML_01082	3.99e-166	gntR	-	-	K	ko:K03489	-	ko00000,ko03000	UTRA
CMLPILML_01083	2.83e-57	-	-	-	S	-	-	-	Domain of unknown function (DUF3284)
CMLPILML_01084	0.0	-	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
CMLPILML_01085	1.1e-172	-	-	-	K	ko:K03492	-	ko00000,ko03000	UTRA
CMLPILML_01086	1.76e-68	-	2.7.1.196, 2.7.1.205	-	G	ko:K02759	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose Cellobiose specific IIA subunit
CMLPILML_01087	2.42e-70	ptcB	2.7.1.196, 2.7.1.205	-	G	ko:K02760	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
CMLPILML_01088	0.0	pts23C	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
CMLPILML_01089	0.0	pbg6	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
CMLPILML_01090	3.8e-202	ypbG	2.7.1.2	-	GK	ko:K00845	ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	ROK family
CMLPILML_01091	2.21e-148	-	-	-	-	-	-	-	-
CMLPILML_01093	2.85e-147	-	-	-	E	-	-	-	Belongs to the SOS response-associated peptidase family
CMLPILML_01094	4.06e-247	trpS	6.1.1.2	-	J	ko:K01867	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-I aminoacyl-tRNA synthetase family
CMLPILML_01095	6.82e-119	comEB	3.5.4.12	-	F	ko:K01493	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko02044	MafB19-like deaminase
CMLPILML_01096	1.52e-129	-	-	-	S	ko:K06872	-	ko00000	TPM domain
CMLPILML_01097	1.44e-114	mgtA	3.6.3.2	-	P	ko:K01531	-	ko00000,ko01000	COG0474 Cation transport ATPase
CMLPILML_01098	0.0	metG	6.1.1.10	-	J	ko:K01874	ko00450,ko00970,map00450,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CMLPILML_01099	2.07e-189	tatD	-	-	L	ko:K03424	-	ko00000,ko01000	hydrolase, TatD family
CMLPILML_01100	1.6e-127	rnmV	3.1.26.8	-	J	ko:K05985	-	ko00000,ko01000	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
CMLPILML_01101	3.56e-206	ksgA	2.1.1.182	-	J	ko:K02528	-	ko00000,ko01000,ko03009	Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
CMLPILML_01102	2.99e-49	veg	-	-	S	-	-	-	Biofilm formation stimulator VEG
CMLPILML_01103	7.77e-196	purR	-	-	F	ko:K09685	-	ko00000,ko03000	pur operon repressor
CMLPILML_01104	0.0	glmU	2.3.1.157, 2.7.7.23	-	M	ko:K04042	ko00520,ko01100,ko01130,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
CMLPILML_01105	9.21e-223	prs	2.7.6.1	-	F	ko:K00948	ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
CMLPILML_01106	1.05e-227	yvdE	-	-	K	-	-	-	helix_turn _helix lactose operon repressor
CMLPILML_01107	0.0	malA1	3.2.1.10, 3.2.1.20	GH13,GH31	G	ko:K01182,ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Alpha amylase, catalytic domain
CMLPILML_01108	0.0	nplT	3.2.1.133, 3.2.1.135, 3.2.1.54	GH13	G	ko:K01208	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 13 family
CMLPILML_01109	0.0	mapA	2.4.1.8	GH65	G	ko:K00691	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	hydrolase, family 65, central catalytic
CMLPILML_01110	6.6e-150	pgmB	5.4.2.6	-	S	ko:K01838	ko00500,map00500	ko00000,ko00001,ko01000	beta-phosphoglucomutase
CMLPILML_01111	5.55e-268	msmX	-	-	P	ko:K10112	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
CMLPILML_01112	1.58e-293	malE	-	-	G	ko:K15770	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding protein
CMLPILML_01113	0.0	malF	-	-	P	ko:K15771	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
CMLPILML_01114	2.93e-199	malG	-	-	P	ko:K15772	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
CMLPILML_01115	0.0	dexB	3.2.1.70	-	G	ko:K01215	-	ko00000,ko01000	Alpha amylase, catalytic domain protein
CMLPILML_01116	0.0	-	-	-	S	ko:K06885	-	ko00000	Metal dependent phosphohydrolases with conserved 'HD' motif.
CMLPILML_01117	4.73e-96	-	-	-	S	-	-	-	Domain of unknown function (DUF1934)
CMLPILML_01118	3.78e-92	rpoE	-	-	K	ko:K03048	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko03021,ko03400	Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
CMLPILML_01119	0.0	pyrG	6.3.4.2	-	F	ko:K01937	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
CMLPILML_01120	6.24e-306	murA	2.5.1.7	-	M	ko:K00790	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
CMLPILML_01121	4.58e-305	pbuX	-	-	F	ko:K03458,ko:K16169	-	ko00000,ko02000	xanthine permease
CMLPILML_01122	1.66e-136	xpt	2.4.2.22	-	F	ko:K03816	ko00230,ko01100,ko01110,map00230,map01100,map01110	ko00000,ko00001,ko01000	Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
CMLPILML_01123	1.59e-172	-	-	-	K	-	-	-	DNA-binding helix-turn-helix protein
CMLPILML_01124	0.0	guaA	6.3.5.2	-	F	ko:K01951	ko00230,ko00983,ko01100,map00230,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko01002	Catalyzes the synthesis of GMP from XMP
CMLPILML_01126	5.2e-229	-	-	-	K	-	-	-	Helix-turn-helix
CMLPILML_01127	7.98e-50	-	-	-	-	-	-	-	-
CMLPILML_01128	9.94e-90	doc	-	-	S	ko:K07341	-	ko00000,ko02048	Fic/DOC family
CMLPILML_01129	1.63e-121	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
CMLPILML_01130	6.29e-146	-	-	-	S	-	-	-	Flavodoxin-like fold
CMLPILML_01131	7.78e-63	yjdF3	-	-	S	-	-	-	Protein of unknown function (DUF2992)
CMLPILML_01133	9.45e-67	-	-	-	-	-	-	-	-
CMLPILML_01134	5.66e-67	-	-	-	S	-	-	-	Domain of unknown function (DUF4160)
CMLPILML_01135	3.72e-86	yjdF3	-	-	S	-	-	-	Protein of unknown function (DUF2992)
CMLPILML_01136	2.08e-127	ogt	2.1.1.63	-	L	ko:K00567	-	ko00000,ko01000,ko03400	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
CMLPILML_01137	1.97e-123	-	-	-	-	-	-	-	-
CMLPILML_01138	0.0	frc	2.8.3.16	-	C	ko:K07749	-	ko00000,ko01000	Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
CMLPILML_01139	0.0	spxB	1.2.3.3, 1.2.5.1, 2.2.1.6, 4.1.1.8	-	EH	ko:K00156,ko:K00158,ko:K01577,ko:K01652	ko00290,ko00620,ko00630,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00620,map00630,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the TPP enzyme family
CMLPILML_01140	9.92e-266	ywkB	-	-	S	ko:K07088	-	ko00000	Membrane transport protein
CMLPILML_01141	1.64e-52	-	-	-	-	-	-	-	-
CMLPILML_01142	4.86e-28	-	4.2.1.11	-	G	ko:K01689	ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066	ko00000,ko00001,ko00002,ko01000,ko03019,ko04147	Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
CMLPILML_01143	3.68e-238	-	4.2.1.11	-	G	ko:K01689	ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066	ko00000,ko00001,ko00002,ko01000,ko03019,ko04147	Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
CMLPILML_01144	1.67e-101	-	-	-	S	ko:K11621	ko02020,map02020	ko00000,ko00001	Putative adhesin
CMLPILML_01145	4.92e-104	-	-	-	-	-	-	-	-
CMLPILML_01147	0.0	pepDA	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
CMLPILML_01148	2.21e-294	glyA	2.1.2.1	-	E	ko:K00600	ko00260,ko00460,ko00630,ko00670,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko01523,map00260,map00460,map00630,map00670,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map01523	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
CMLPILML_01149	0.0	rafA	3.2.1.22	-	G	ko:K07407	ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603	ko00000,ko00001,ko01000	alpha-galactosidase
CMLPILML_01150	3.24e-51	-	3.1.21.3	-	V	ko:K01154	-	ko00000,ko01000,ko02048	Type I restriction
CMLPILML_01151	3.88e-50	-	3.1.21.3	-	L	ko:K01154	-	ko00000,ko01000,ko02048	Type I restriction modification DNA specificity domain
CMLPILML_01152	0.0	hsdM	2.1.1.72	-	V	ko:K03427	-	ko00000,ko01000,ko02048	type I restriction-modification system
CMLPILML_01153	4.26e-32	-	-	-	K	-	-	-	Cro/C1-type HTH DNA-binding domain
CMLPILML_01154	3.22e-137	-	-	-	F	-	-	-	helicase superfamily c-terminal domain
CMLPILML_01157	6.8e-32	-	-	-	-	-	-	-	-
CMLPILML_01158	3.92e-38	-	-	-	-	-	-	-	-
CMLPILML_01159	2.69e-256	-	-	-	L	-	-	-	Protein of unknown function (DUF2800)
CMLPILML_01160	1.44e-123	-	-	-	S	-	-	-	Protein of unknown function (DUF2815)
CMLPILML_01161	0.0	-	2.7.7.7	-	L	ko:K02334	-	ko00000,ko01000	DNA polymerase
CMLPILML_01162	2.81e-88	-	-	-	S	-	-	-	Psort location Cytoplasmic, score
CMLPILML_01163	0.0	-	-	-	S	ko:K06919	-	ko00000	Phage plasmid primase, P4
CMLPILML_01164	1.06e-62	-	-	-	S	-	-	-	VRR_NUC
CMLPILML_01165	0.0	-	-	-	L	-	-	-	SNF2 family N-terminal domain
CMLPILML_01166	3.56e-113	-	-	-	-	-	-	-	-
CMLPILML_01167	2.4e-130	-	-	-	-	-	-	-	-
CMLPILML_01168	8.18e-309	-	-	-	KL	-	-	-	DNA methylase
CMLPILML_01169	3.2e-150	-	-	-	S	-	-	-	Psort location Cytoplasmic, score
CMLPILML_01170	2.05e-42	-	-	-	S	-	-	-	Domain of unknown function (DUF5049)
CMLPILML_01171	0.0	-	-	-	S	-	-	-	overlaps another CDS with the same product name
CMLPILML_01172	4.58e-308	-	-	-	S	-	-	-	Phage portal protein
CMLPILML_01173	4.66e-156	-	3.4.21.92	-	OU	ko:K01358	ko04112,ko04212,map04112,map04212	ko00000,ko00001,ko01000,ko01002	Belongs to the peptidase S14 family
CMLPILML_01174	1.58e-282	-	-	-	S	-	-	-	Phage capsid family
CMLPILML_01175	3.08e-57	-	-	-	S	-	-	-	Phage gp6-like head-tail connector protein
CMLPILML_01176	1.29e-88	-	-	-	S	-	-	-	Phage head-tail joining protein
CMLPILML_01177	5.95e-92	-	-	-	S	-	-	-	Bacteriophage holin family
CMLPILML_01178	3.19e-186	-	-	-	M	-	-	-	Glycosyl hydrolases family 25
CMLPILML_01179	3.04e-48	-	-	-	-	-	-	-	-
CMLPILML_01180	0.0	-	-	-	L	-	-	-	Recombinase zinc beta ribbon domain
CMLPILML_01181	0.0	-	-	-	L	-	-	-	Recombinase
CMLPILML_01182	8.23e-23	-	2.1.1.303	-	K	ko:K04096,ko:K20421	ko01059,ko01130,map01059,map01130	ko00000,ko00001,ko00002,ko01000	DNA-binding transcription factor activity
CMLPILML_01183	1.21e-35	-	-	-	M	-	-	-	domain protein
CMLPILML_01184	0.0	rumA_2	2.1.1.190	-	J	ko:K03215	-	ko00000,ko01000,ko03009	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
CMLPILML_01185	6.34e-156	-	-	-	S	ko:K01992,ko:K20491	ko02010,ko02020,ko02024,map02010,map02020,map02024	ko00000,ko00001,ko00002,ko02000	ABC-2 family transporter protein
CMLPILML_01186	3.41e-168	spaF	-	-	V	ko:K01990,ko:K20490	ko02010,ko02020,ko02024,map02010,map02020,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, ATP-binding protein
CMLPILML_01187	2.12e-309	nhaC	-	-	C	ko:K03315	-	ko00000,ko02000	Na H antiporter NhaC
CMLPILML_01188	1.36e-209	XK27_10120	-	-	K	-	-	-	S-adenosyl-l-methionine hydroxide adenosyltransferase
CMLPILML_01189	1.8e-123	-	-	-	S	ko:K16924	-	ko00000,ko00002,ko02000	UPF0397 protein
CMLPILML_01190	0.0	ykoD	-	-	P	ko:K16786,ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
CMLPILML_01191	5.56e-183	cbiQ	-	-	P	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	cobalt transport
CMLPILML_01192	3.27e-153	ybhL	-	-	S	ko:K06890	-	ko00000	Belongs to the BI1 family
CMLPILML_01193	0.0	rtpR	1.17.4.2	-	F	ko:K00527	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000	ribonucleoside-triphosphate reductase activity
CMLPILML_01194	3.15e-85	-	-	-	S	-	-	-	Domain of unknown function (DUF4430)
CMLPILML_01195	1.19e-113	-	-	-	S	ko:K16927	-	ko00000,ko00002,ko02000	ECF transporter, substrate-specific component
CMLPILML_01196	5.03e-122	-	-	-	S	-	-	-	Cob(I)alamin adenosyltransferase
CMLPILML_01197	1.86e-165	-	-	-	L	-	-	-	Helix-turn-helix domain
CMLPILML_01198	7.5e-29	-	-	-	L	ko:K07497	-	ko00000	hmm pf00665
CMLPILML_01199	1.61e-49	-	-	-	L	ko:K07497	-	ko00000	hmm pf00665
CMLPILML_01200	1.51e-194	-	-	-	S	-	-	-	hydrolase
CMLPILML_01202	1.86e-215	dagK	2.7.1.107	-	G	ko:K07029	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko01000	Lipid kinase
CMLPILML_01203	0.0	gatB	6.3.5.6, 6.3.5.7	-	J	ko:K02434	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
CMLPILML_01204	0.0	gatA	6.3.5.6, 6.3.5.7	-	J	ko:K02433	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
CMLPILML_01205	1.29e-64	gatC	6.3.5.6, 6.3.5.7	-	J	ko:K02435	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
CMLPILML_01206	4.64e-265	camS	-	-	S	-	-	-	sex pheromone
CMLPILML_01207	0.0	ligA	6.5.1.2	-	L	ko:K01972	ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430	ko00000,ko00001,ko01000,ko03032,ko03400	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
CMLPILML_01208	0.0	pcrA	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	ATP-dependent DNA helicase
CMLPILML_01209	3.07e-149	acmA	3.2.1.17, 3.2.1.96	-	NU	ko:K01185,ko:K01227	ko00511,map00511	ko00000,ko00001,ko01000	mannosyl-glycoprotein
CMLPILML_01210	4.37e-131	-	-	-	S	-	-	-	ECF transporter, substrate-specific component
CMLPILML_01212	8.17e-112	ydcK	-	-	S	ko:K03095	-	ko00000	Belongs to the SprT family
CMLPILML_01213	7.2e-174	-	-	-	M	-	-	-	Glycosyltransferase sugar-binding region containing DXD motif
CMLPILML_01214	0.0	epsU	-	-	S	ko:K03328	-	ko00000	Polysaccharide biosynthesis protein
CMLPILML_01215	1.79e-292	-	-	-	M	-	-	-	CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
CMLPILML_01216	1.29e-189	-	-	-	-	-	-	-	-
CMLPILML_01217	0.0	-	-	-	V	-	-	-	ABC transporter transmembrane region
CMLPILML_01218	0.0	pacL	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	P-type ATPase
CMLPILML_01219	6.16e-197	nadE	6.3.1.5	-	F	ko:K01916	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
CMLPILML_01220	0.0	pncB	6.3.4.21	-	F	ko:K00763	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
CMLPILML_01221	1.68e-67	-	-	-	M	-	-	-	Glycosyltransferase like family 2
CMLPILML_01222	0.0	-	-	-	M	-	-	-	Glycosyltransferase like family 2
CMLPILML_01223	7.18e-259	-	-	-	M	-	-	-	Glycosyl transferases group 1
CMLPILML_01224	1.75e-182	tagA	2.4.1.187	GT26	F	ko:K05946	ko05111,map05111	ko00000,ko00001,ko01000,ko01003	Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
CMLPILML_01225	2.31e-87	tagD	2.7.7.39	-	IM	ko:K00980	ko00564,map00564	ko00000,ko00001,ko01000	Glycerol-3-phosphate cytidylyltransferase
CMLPILML_01226	6.31e-159	gntR1	-	-	K	ko:K03710	-	ko00000,ko03000	UTRA
CMLPILML_01227	2.15e-246	-	-	-	-	-	-	-	-
CMLPILML_01228	1.44e-69	XK27_05625	-	-	P	-	-	-	Rhodanese Homology Domain
CMLPILML_01231	1.53e-214	-	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	lactate/malate dehydrogenase, alpha/beta C-terminal domain
CMLPILML_01232	1.43e-187	-	-	-	K	-	-	-	SIS domain
CMLPILML_01234	3.9e-243	XK27_10475	-	-	S	-	-	-	Oxidoreductase family, NAD-binding Rossmann fold
CMLPILML_01235	7.78e-80	-	-	-	S	-	-	-	Bacterial protein of unknown function (DUF898)
CMLPILML_01237	2.22e-159	-	-	-	M	-	-	-	LysM domain protein
CMLPILML_01238	4.59e-175	-	-	-	M	-	-	-	LysM domain protein
CMLPILML_01239	1.83e-175	-	-	-	S	-	-	-	Putative ABC-transporter type IV
CMLPILML_01240	1.45e-232	-	-	-	M	-	-	-	Glycosyl hydrolases family 25
CMLPILML_01241	1.73e-87	-	-	-	S	-	-	-	Pfam:Phage_holin_6_1
CMLPILML_01242	5.31e-58	-	-	-	-	-	-	-	-
CMLPILML_01243	1e-84	-	-	-	-	-	-	-	-
CMLPILML_01245	3.59e-113	-	-	-	-	-	-	-	-
CMLPILML_01246	0.0	-	-	-	-	-	-	-	-
CMLPILML_01247	3.5e-126	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2313)
CMLPILML_01248	8.59e-271	-	-	-	S	-	-	-	Baseplate J-like protein
CMLPILML_01249	9.94e-79	-	-	-	S	-	-	-	Protein of unknown function (DUF2634)
CMLPILML_01250	6.7e-72	-	-	-	S	-	-	-	Protein of unknown function (DUF2577)
CMLPILML_01251	2.21e-253	-	-	-	S	-	-	-	N-acetylmuramoyl-L-alanine amidase activity
CMLPILML_01252	8.91e-154	xkdP	-	-	S	-	-	-	protein containing LysM domain
CMLPILML_01253	0.0	-	-	-	S	-	-	-	phage tail tape measure protein
CMLPILML_01254	1.57e-88	xkdN	-	-	S	-	-	-	Phage XkdN-like tail assembly chaperone protein, TAC
CMLPILML_01255	3.04e-110	-	-	-	S	-	-	-	Phage tail tube protein
CMLPILML_01256	1.67e-307	-	-	-	S	-	-	-	Phage tail sheath C-terminal domain
CMLPILML_01257	8.81e-39	-	-	-	-	-	-	-	-
CMLPILML_01258	4.75e-91	-	-	-	-	-	-	-	-
CMLPILML_01259	5.61e-98	-	-	-	S	-	-	-	Bacteriophage HK97-gp10, putative tail-component
CMLPILML_01260	1.55e-79	-	-	-	-	-	-	-	-
CMLPILML_01261	7.13e-87	-	-	-	-	-	-	-	-
CMLPILML_01262	2.94e-242	-	-	-	-	-	-	-	-
CMLPILML_01263	1.48e-117	-	-	-	S	-	-	-	viral scaffold
CMLPILML_01264	6.92e-282	-	-	-	S	-	-	-	Phage Mu protein F like protein
CMLPILML_01265	0.0	-	-	-	S	-	-	-	Phage portal protein, SPP1 Gp6-like
CMLPILML_01266	1.01e-314	-	-	-	S	-	-	-	DNA packaging
CMLPILML_01267	3.95e-115	-	-	-	S	-	-	-	Terminase small subunit
CMLPILML_01268	2.06e-152	-	-	-	-	-	-	-	-
CMLPILML_01270	4.56e-154	-	-	-	C	-	-	-	Domain of unknown function (DUF4145)
CMLPILML_01271	4.13e-65	-	-	-	K	-	-	-	chromosome segregation
CMLPILML_01273	1.83e-123	-	-	-	-	-	-	-	-
CMLPILML_01274	3.18e-16	-	-	-	-	-	-	-	-
CMLPILML_01275	2.62e-40	-	-	-	-	-	-	-	-
CMLPILML_01276	1.97e-48	-	-	-	-	-	-	-	-
CMLPILML_01277	2.42e-30	-	-	-	-	-	-	-	-
CMLPILML_01278	4.17e-102	-	-	-	L	-	-	-	Endodeoxyribonuclease RusA
CMLPILML_01283	5.21e-41	-	-	-	-	-	-	-	-
CMLPILML_01285	8.57e-163	-	-	-	K	ko:K07741	-	ko00000	AntA/AntB antirepressor
CMLPILML_01287	1.79e-26	-	-	-	S	-	-	-	sequence-specific DNA binding
CMLPILML_01288	3.23e-51	-	-	-	L	-	-	-	Helix-turn-helix domain
CMLPILML_01289	1.78e-170	-	-	-	S	-	-	-	Protein of unknown function (DUF1071)
CMLPILML_01291	1.15e-73	-	-	-	-	-	-	-	-
CMLPILML_01292	1.73e-22	-	-	-	-	-	-	-	-
CMLPILML_01297	1.39e-70	-	-	-	S	-	-	-	Domain of unknown function (DUF771)
CMLPILML_01298	3.93e-07	-	-	-	K	-	-	-	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
CMLPILML_01299	1.98e-72	-	-	-	K	-	-	-	Helix-turn-helix domain
CMLPILML_01300	5.98e-105	-	-	-	S	-	-	-	Pfam:Peptidase_M78
CMLPILML_01301	4.6e-128	-	-	-	S	-	-	-	Domain of Unknown Function with PDB structure (DUF3862)
CMLPILML_01303	7.41e-156	-	-	-	S	-	-	-	Phage integrase family
CMLPILML_01304	7.85e-80	psiE	-	-	S	ko:K13256	-	ko00000	Phosphate-starvation-inducible E
CMLPILML_01305	1.7e-122	-	-	-	K	-	-	-	acetyltransferase
CMLPILML_01306	7.35e-198	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
CMLPILML_01308	1.53e-210	yvgN	-	-	C	-	-	-	Aldo keto reductase
CMLPILML_01309	1.45e-313	-	1.8.1.7	-	C	ko:K00383,ko:K21739	ko00480,ko04918,map00480,map04918	ko00000,ko00001,ko01000	Pyridine nucleotide-disulfide oxidoreductase
CMLPILML_01310	5.96e-173	galE	5.1.3.2	-	M	ko:K01784	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the NAD(P)-dependent epimerase dehydratase family
CMLPILML_01311	6.31e-223	trxB	1.8.1.9	-	C	ko:K00384	ko00450,map00450	ko00000,ko00001,ko01000	Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
CMLPILML_01312	2.67e-239	gpsA	1.1.1.94	-	I	ko:K00057	ko00564,ko01110,map00564,map01110	ko00000,ko00001,ko01000	Glycerol-3-phosphate dehydrogenase
CMLPILML_01313	6.19e-202	lgt	-	-	M	ko:K13292	-	ko00000,ko01000	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
CMLPILML_01314	6.07e-225	hprK	-	-	F	ko:K06023	-	ko00000,ko01000	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
CMLPILML_01315	2.64e-49	-	-	-	-	-	-	-	-
CMLPILML_01316	8.75e-236	prfB	-	-	J	ko:K02836	-	ko00000,ko03012	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
CMLPILML_01317	0.0	secA	-	-	U	ko:K03070	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
CMLPILML_01318	2.35e-125	hpf	-	-	J	ko:K05808	-	ko00000,ko03009	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
CMLPILML_01319	1.29e-162	comFC	-	-	S	ko:K02242	-	ko00000,ko00002,ko02044	Competence protein
CMLPILML_01320	2.75e-308	comFA	-	-	L	ko:K02240	-	ko00000,ko00002,ko02044	Helicase C-terminal domain protein
CMLPILML_01321	1.39e-156	yvyE	3.4.13.9	-	S	ko:K01271	-	ko00000,ko01000,ko01002	YigZ family
CMLPILML_01322	2.33e-262	tagO	2.7.8.33, 2.7.8.35	-	M	ko:K02851	-	ko00000,ko01000,ko01003,ko01005	transferase
CMLPILML_01323	1.38e-312	rny	-	-	S	ko:K18682	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	Endoribonuclease that initiates mRNA decay
CMLPILML_01324	1.73e-249	recA	-	-	L	ko:K03553	ko03440,map03440	ko00000,ko00001,ko00002,ko03400	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
CMLPILML_01325	7.62e-126	pgsA	2.7.8.5	-	I	ko:K00995	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
CMLPILML_01326	1.85e-172	ymfM	-	-	S	ko:K15539	-	ko00000	Helix-turn-helix domain
CMLPILML_01327	3.01e-166	fabG	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Enoyl-(Acyl carrier protein) reductase
CMLPILML_01328	2.58e-296	ymfH	-	-	S	-	-	-	Peptidase M16
CMLPILML_01329	3.51e-292	ymfF	-	-	S	-	-	-	Peptidase M16 inactive domain protein
CMLPILML_01330	0.0	ftsK	-	-	D	ko:K03466	-	ko00000,ko03036	Belongs to the FtsK SpoIIIE SftA family
CMLPILML_01331	8.29e-100	-	-	-	S	-	-	-	Protein of unknown function (DUF1149)
CMLPILML_01332	1.88e-135	cspR	2.1.1.207	-	J	ko:K03216	-	ko00000,ko01000,ko03016	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
CMLPILML_01333	4.6e-271	XK27_05220	-	-	S	-	-	-	AI-2E family transporter
CMLPILML_01334	1.88e-88	srlB	2.7.1.198	-	G	ko:K02781	ko00051,ko02060,map00051,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system glucitol/sorbitol-specific IIA component
CMLPILML_01335	6.1e-256	pgl	3.1.1.31	-	G	ko:K07404	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Lactonase, 7-bladed beta-propeller
CMLPILML_01336	5.46e-300	-	-	-	N	ko:K09384	-	ko00000	Uncharacterized conserved protein (DUF2075)
CMLPILML_01337	0.0	mycA	4.2.1.53	-	S	ko:K10254	-	ko00000,ko01000	Myosin-crossreactive antigen
CMLPILML_01338	2.38e-221	rluD2	5.4.99.23	-	J	ko:K06180	-	ko00000,ko01000,ko03009	Responsible for synthesis of pseudouridine from uracil
CMLPILML_01339	2.24e-194	nadK	2.7.1.23	-	F	ko:K00858	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
CMLPILML_01340	1.7e-146	yjbM	2.7.6.5	-	S	ko:K07816	ko00230,map00230	ko00000,ko00001,ko01000	RelA SpoT domain protein
CMLPILML_01341	8.77e-144	-	-	-	S	-	-	-	CYTH
CMLPILML_01342	2.2e-139	yjbH	-	-	Q	-	-	-	Thioredoxin
CMLPILML_01343	4.94e-209	coiA	-	-	S	ko:K06198	-	ko00000	Competence protein
CMLPILML_01344	2.82e-154	mecA	-	-	NOT	ko:K16511	-	ko00000	Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
CMLPILML_01345	1e-88	spxA	-	-	K	ko:K16509	-	ko00000	Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
CMLPILML_01346	0.0	ptsI	2.7.3.9	-	G	ko:K08483	ko02060,map02060	ko00000,ko00001,ko01000,ko02000	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
CMLPILML_01347	7.45e-54	ptsH	-	-	G	ko:K11189	-	ko00000,ko02000	phosphocarrier protein HPR
CMLPILML_01348	4.33e-36	-	-	-	-	-	-	-	-
CMLPILML_01349	0.0	clpE	-	-	O	ko:K03697	-	ko00000,ko03110	Belongs to the ClpA ClpB family
CMLPILML_01350	2.17e-59	XK27_09445	-	-	S	-	-	-	Domain of unknown function (DUF1827)
CMLPILML_01351	0.0	prfC	-	-	J	ko:K02837	-	ko00000,ko03012	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
CMLPILML_01352	4.69e-202	hlyX	-	-	S	ko:K03699	-	ko00000,ko02042	Transporter associated domain
CMLPILML_01353	8.42e-102	-	-	-	-	-	-	-	-
CMLPILML_01354	4.08e-117	-	-	-	-	-	-	-	-
CMLPILML_01355	6.36e-147	ygaC	-	-	J	ko:K07586	-	ko00000	Belongs to the UPF0374 family
CMLPILML_01356	1.1e-187	recX	-	-	S	ko:K03565	-	ko00000,ko03400	Regulatory protein RecX
CMLPILML_01357	0.0	rumA_1	2.1.1.190, 2.1.1.35	-	J	ko:K00557,ko:K03215	-	ko00000,ko01000,ko03009,ko03016	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
CMLPILML_01358	2.41e-279	mvaS	2.3.3.10	-	I	ko:K01641	ko00072,ko00280,ko00650,ko00900,ko01100,ko01110,ko01130,map00072,map00280,map00650,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Hydroxymethylglutaryl-CoA synthase
CMLPILML_01359	5.82e-283	mvaA	1.1.1.88, 2.3.1.9	-	C	ko:K00054,ko:K00626	ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the HMG-CoA reductase family
CMLPILML_01360	4.31e-278	atoB	1.1.1.88, 2.3.1.9	-	I	ko:K00054,ko:K00626	ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the thiolase family
CMLPILML_01361	5.22e-228	ybcH	-	-	D	ko:K06889	-	ko00000	Alpha beta
CMLPILML_01363	6.93e-195	supH	-	-	S	-	-	-	haloacid dehalogenase-like hydrolase
CMLPILML_01364	1.34e-261	-	-	-	EGP	-	-	-	Major Facilitator Superfamily
CMLPILML_01365	0.0	glnA	6.3.1.2	-	E	ko:K01915	ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727	ko00000,ko00001,ko01000,ko04147	glutamine synthetase
CMLPILML_01366	3.2e-214	miaA	2.5.1.75	-	F	ko:K00791	ko00908,ko01100,ko01110,map00908,map01100,map01110	ko00000,ko00001,ko01000,ko01006,ko03016	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
CMLPILML_01367	1.18e-26	-	-	-	S	-	-	-	Protein of unknown function (DUF3042)
CMLPILML_01368	1.47e-76	yqhL	-	-	P	-	-	-	Rhodanese-like protein
CMLPILML_01369	1.15e-47	yqgQ	-	-	S	-	-	-	Bacterial protein of unknown function (DUF910)
CMLPILML_01370	9.32e-154	gluP	3.4.21.105	-	S	ko:K19225	-	ko00000,ko01000,ko01002	Rhomboid family
CMLPILML_01371	1.17e-119	fthC	6.3.3.2	-	H	ko:K01934	ko00670,ko01100,map00670,map01100	ko00000,ko00001,ko01000	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
CMLPILML_01372	3.09e-29	rpmG	-	-	J	ko:K02913	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL33 family
CMLPILML_01373	0.0	pbp2b	-	-	M	ko:K00687,ko:K12553,ko:K21465,ko:K21466	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01011	Penicillin-binding Protein
CMLPILML_01374	0.0	-	-	-	S	-	-	-	membrane
CMLPILML_01375	3.09e-96	greA	-	-	K	ko:K03624	-	ko00000,ko03021	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
CMLPILML_01376	1.11e-261	mltG	-	-	S	ko:K07082	-	ko00000	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
CMLPILML_01377	0.0	pheT	6.1.1.20	-	J	ko:K01890	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
CMLPILML_01378	9.43e-260	pheS	6.1.1.20	-	J	ko:K01889	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
CMLPILML_01379	1.01e-83	yodB	-	-	K	-	-	-	Transcriptional regulator, HxlR family
CMLPILML_01380	6.34e-178	spoU	-	-	J	ko:K03437	-	ko00000,ko03016	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CMLPILML_01381	8.53e-59	acyP	3.6.1.7	-	C	ko:K01512	ko00620,ko00627,ko01120,map00620,map00627,map01120	ko00000,ko00001,ko01000	Belongs to the acylphosphatase family
CMLPILML_01382	2.72e-216	yidC	-	-	U	ko:K03217	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044,ko03029	Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
CMLPILML_01383	0.0	arlS	2.7.13.3	-	T	ko:K18940	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
CMLPILML_01384	3.11e-169	csrR	-	-	K	-	-	-	response regulator
CMLPILML_01385	7.11e-124	ylbN	-	-	S	ko:K07040	-	ko00000	Uncharacterized ACR, COG1399
CMLPILML_01386	1.45e-279	ylbM	-	-	S	-	-	-	Belongs to the UPF0348 family
CMLPILML_01387	1.78e-77	rsfS	-	-	J	ko:K09710	-	ko00000,ko03009	Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
CMLPILML_01388	2.26e-142	yqeK	-	-	H	-	-	-	Hydrolase, HD family
CMLPILML_01389	1.16e-153	nadD	2.7.7.18	-	H	ko:K00969	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
CMLPILML_01390	1.94e-269	yqeH	-	-	S	ko:K06948	-	ko00000,ko03009	Ribosome biogenesis GTPase YqeH
CMLPILML_01391	1.25e-119	yqeG	-	-	S	ko:K07015	-	ko00000	HAD phosphatase, family IIIA
CMLPILML_01392	2.75e-244	add	3.5.4.2, 3.5.4.4	-	F	ko:K01488,ko:K02029,ko:K21053	ko00230,ko01100,ko05340,map00230,map01100,map05340	ko00000,ko00001,ko00002,ko01000,ko02000	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
CMLPILML_01393	3.54e-75	rplT	-	-	J	ko:K02887	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
CMLPILML_01394	9.64e-38	rpmI	-	-	J	ko:K02916	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL35 family
CMLPILML_01395	1.29e-112	infC	-	-	J	ko:K02520	-	ko00000,ko03012,ko03029	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
CMLPILML_01396	8.85e-170	-	-	-	S	ko:K01992	-	ko00000,ko00002,ko02000	domain protein
CMLPILML_01397	5.34e-218	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter
CMLPILML_01398	1.82e-97	-	-	-	S	-	-	-	Protein of unknown function (DUF3021)
CMLPILML_01399	6.56e-95	-	-	-	K	-	-	-	LytTr DNA-binding domain
CMLPILML_01400	0.0	thrS	6.1.1.3	-	J	ko:K01868	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
CMLPILML_01401	4.54e-210	dnaI	-	-	L	ko:K11144	-	ko00000,ko03032	Primosomal protein DnaI
CMLPILML_01402	0.0	dnaB2	-	-	L	ko:K03346	-	ko00000,ko03032	Replication initiation and membrane attachment
CMLPILML_01403	5.92e-107	nrdR	-	-	K	ko:K07738	-	ko00000,ko03000	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
CMLPILML_01404	6.46e-137	coaE	2.7.1.24	-	F	ko:K00859	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
CMLPILML_01405	2.85e-206	fpg	3.2.2.23, 4.2.99.18	-	L	ko:K10563	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
CMLPILML_01406	0.0	polA	2.7.7.7	-	L	ko:K02335	ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440	ko00000,ko00001,ko01000,ko03032,ko03400	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
CMLPILML_01407	6.03e-292	dpaL	4.3.1.15	-	E	ko:K01751	-	ko00000,ko01000	Pyridoxal-phosphate dependent enzyme
CMLPILML_01408	4.61e-284	-	-	-	EGP	-	-	-	Major Facilitator
CMLPILML_01409	6.53e-90	-	-	-	K	-	-	-	Transcriptional regulator
CMLPILML_01410	1.92e-17	-	-	-	-	-	-	-	-
CMLPILML_01411	5.98e-100	frlR1	-	-	K	ko:K03710,ko:K10711	-	ko00000,ko03000	UTRA
CMLPILML_01412	0.0	murC	6.3.2.8	-	M	ko:K01924	ko00471,ko00550,ko01100,map00471,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Belongs to the MurCDEF family
CMLPILML_01413	7.5e-153	cutC	-	-	P	ko:K06201	-	ko00000	Participates in the control of copper homeostasis
CMLPILML_01414	1.23e-249	-	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
CMLPILML_01415	8.76e-121	-	-	-	S	-	-	-	Glycine/sarcosine/betaine reductase selenoprotein B (GRDB)
CMLPILML_01416	2.92e-231	asnA2	3.5.1.1	-	E	ko:K01424	ko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110	ko00000,ko00001,ko01000	Asparaginase
CMLPILML_01417	0.0	-	-	-	E	-	-	-	Peptidase family M20/M25/M40
CMLPILML_01418	8.28e-169	-	-	-	K	ko:K03710	-	ko00000,ko03000	UTRA
CMLPILML_01419	6.18e-157	XK27_10290	-	-	J	ko:K06878	-	ko00000	Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
CMLPILML_01420	4.28e-71	ytpP	-	-	CO	-	-	-	Thioredoxin
CMLPILML_01421	3.11e-19	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
CMLPILML_01422	1.34e-53	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
CMLPILML_01423	3.87e-161	trmB	2.1.1.33	-	J	ko:K03439	-	ko00000,ko01000,ko03016	Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
CMLPILML_01424	3.63e-289	ecsB	-	-	U	ko:K01992	-	ko00000,ko00002,ko02000	ABC transporter
CMLPILML_01425	3.26e-173	ecsA	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
CMLPILML_01426	1.01e-100	hit	-	-	FG	ko:K02503	-	ko00000,ko04147	Scavenger mRNA decapping enzyme C-term binding
CMLPILML_01427	4.48e-90	-	-	-	-	-	-	-	-
CMLPILML_01428	2.42e-72	-	-	-	S	-	-	-	YtxH-like protein
CMLPILML_01429	5.88e-201	prsA	5.2.1.8	-	M	ko:K07533	-	ko00000,ko01000,ko03110	Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
CMLPILML_01430	1.3e-238	yhaM	-	-	S	ko:K03698	-	ko00000,ko01000,ko03019	Metal dependent phosphohydrolases with conserved 'HD' motif.
CMLPILML_01431	0.0	yhaN	-	-	L	-	-	-	AAA domain
CMLPILML_01432	5.64e-295	yhaO	-	-	L	ko:K03547	-	ko00000,ko03400	Ser Thr phosphatase family protein
CMLPILML_01433	3.16e-73	yheA	-	-	S	-	-	-	Belongs to the UPF0342 family
CMLPILML_01434	0.0	pbp2A	2.4.1.129, 3.4.16.4	GT51	M	ko:K12555	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01003,ko01011	penicillin-binding protein
CMLPILML_01435	1.07e-207	rluA	5.4.99.23, 5.4.99.28, 5.4.99.29	-	J	ko:K06177,ko:K06180	-	ko00000,ko01000,ko03009,ko03016	Responsible for synthesis of pseudouridine from uracil
CMLPILML_01437	0.0	polYB	2.7.7.7	-	L	ko:K02346,ko:K03502	-	ko00000,ko01000,ko03400	Belongs to the DNA polymerase type-Y family
CMLPILML_01438	1.43e-87	-	-	-	-	-	-	-	-
CMLPILML_01439	1.11e-123	-	-	-	L	-	-	-	NUDIX domain
CMLPILML_01440	2.08e-196	-	2.7.1.95	-	F	ko:K00897	-	ko00000,ko01000,ko01504	Belongs to the aminoglycoside phosphotransferase family
CMLPILML_01441	2.11e-253	flp	-	-	V	-	-	-	Beta-lactamase
CMLPILML_01443	0.0	hsdR	3.1.21.3	-	V	ko:K01153	-	ko00000,ko01000,ko02048	Subunit R is required for both nuclease and ATPase activities, but not for modification
CMLPILML_01444	0.0	dnaA	-	-	L	ko:K02313	ko02020,ko04112,map02020,map04112	ko00000,ko00001,ko03032,ko03036	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
CMLPILML_01445	2.08e-263	dnaN	2.7.7.7	-	L	ko:K02338	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
CMLPILML_01446	1.04e-27	yaaA	-	-	S	ko:K14761	-	ko00000,ko03009	S4 domain
CMLPILML_01447	4.56e-266	recF	-	-	L	ko:K03629	ko03440,map03440	ko00000,ko00001,ko03400	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
CMLPILML_01448	0.0	gyrB	5.99.1.3	-	L	ko:K02470	-	ko00000,ko01000,ko03032,ko03400	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
CMLPILML_01449	0.0	gyrA	5.99.1.3	-	L	ko:K02469	-	ko00000,ko01000,ko03032,ko03400	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
CMLPILML_01450	4.55e-64	rpsF	-	-	J	ko:K02990	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Binds together with S18 to 16S ribosomal RNA
CMLPILML_01451	7.47e-112	ssb	-	-	L	ko:K03111	ko03030,ko03430,ko03440,map03030,map03430,map03440	ko00000,ko00001,ko03029,ko03032,ko03400	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
CMLPILML_01452	2.5e-47	rpsR	-	-	J	ko:K02963	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
CMLPILML_01453	1.12e-213	corA	-	-	P	ko:K03284	-	ko00000,ko02000	CorA-like Mg2+ transporter protein
CMLPILML_01454	0.0	yybT	-	-	T	-	-	-	signaling protein consisting of a modified GGDEF domain and a DHH domain
CMLPILML_01455	8.13e-99	rplI	-	-	J	ko:K02939	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to the 23S rRNA
CMLPILML_01456	0.0	dnaB	3.6.4.12	-	L	ko:K02314	ko03030,ko04112,map03030,map04112	ko00000,ko00001,ko01000,ko03032	Participates in initiation and elongation during chromosome replication
CMLPILML_01457	2.56e-218	scrK	2.7.1.4	-	GK	ko:K00847	ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100	ko00000,ko00001,ko01000	ROK family
CMLPILML_01458	1.19e-280	-	-	-	I	-	-	-	Protein of unknown function (DUF2974)
CMLPILML_01459	0.0	-	-	-	-	-	-	-	-
CMLPILML_01460	2.64e-151	-	-	-	S	ko:K07507	-	ko00000,ko02000	MgtC family
CMLPILML_01462	6.94e-146	-	-	-	S	-	-	-	HAD hydrolase, family IA, variant
CMLPILML_01463	7.49e-29	-	-	-	K	ko:K07729	-	ko00000,ko03000	Helix-turn-helix XRE-family like proteins
CMLPILML_01464	4.18e-118	-	-	-	S	-	-	-	Protein of unknown function (DUF3278)
CMLPILML_01465	1.39e-256	ydhF	-	-	S	-	-	-	Aldo keto reductase
CMLPILML_01467	5.09e-285	-	-	-	S	-	-	-	Sterol carrier protein domain
CMLPILML_01468	6.39e-150	-	-	-	S	ko:K07118	-	ko00000	NAD(P)H-binding
CMLPILML_01469	2.7e-169	-	-	-	S	-	-	-	Protein of unknown function (DUF975)
CMLPILML_01470	3.71e-177	ysaA	3.1.3.5, 3.8.1.2	-	S	ko:K01560,ko:K07025,ko:K08723	ko00230,ko00240,ko00361,ko00625,ko00760,ko01100,ko01110,ko01120,map00230,map00240,map00361,map00625,map00760,map01100,map01110,map01120	ko00000,ko00001,ko01000	Haloacid dehalogenase-like hydrolase
CMLPILML_01471	4.34e-198	yitS	-	-	S	-	-	-	EDD domain protein, DegV family
CMLPILML_01472	1.92e-26	-	-	-	-	-	-	-	-
CMLPILML_01473	0.0	fusA1	-	-	J	-	-	-	elongation factor G
CMLPILML_01474	1.72e-214	-	-	-	P	ko:K03284	-	ko00000,ko02000	CorA-like Mg2+ transporter protein
CMLPILML_01475	3.18e-19	-	-	-	S	-	-	-	CsbD-like
CMLPILML_01476	1.29e-54	-	-	-	S	-	-	-	Transglycosylase associated protein
CMLPILML_01477	9.2e-207	xth	3.1.11.2	-	L	ko:K01142	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	exodeoxyribonuclease III
CMLPILML_01478	0.0	-	-	-	L	-	-	-	Helicase C-terminal domain protein
CMLPILML_01479	4.93e-212	-	-	-	S	-	-	-	Alpha beta hydrolase
CMLPILML_01480	3.66e-54	-	-	-	-	-	-	-	-
CMLPILML_01481	2.88e-229	ydbI	-	-	K	-	-	-	AI-2E family transporter
CMLPILML_01482	0.0	-	1.8.1.7	-	C	ko:K00383	ko00480,ko04918,map00480,map04918	ko00000,ko00001,ko01000	pyridine nucleotide-disulfide oxidoreductase
CMLPILML_01483	2.28e-271	guaB	1.1.1.205	-	F	ko:K00088	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
CMLPILML_01484	1.8e-135	-	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase
CMLPILML_01485	1.71e-246	ldhA	1.1.1.28	-	C	ko:K03778,ko:K18347	ko00620,ko01120,ko01502,ko02020,map00620,map01120,map01502,map02020	ko00000,ko00001,ko00002,ko01000,ko01504	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CMLPILML_01486	0.0	-	-	-	S	-	-	-	domain, Protein
CMLPILML_01487	0.0	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
CMLPILML_01488	0.0	-	-	-	E	ko:K03294	-	ko00000	Amino Acid
CMLPILML_01489	0.0	clpE	-	-	O	ko:K03697,ko:K04086	-	ko00000,ko03110	AAA domain (Cdc48 subfamily)
CMLPILML_01490	1.76e-199	-	-	-	S	-	-	-	Alpha/beta hydrolase of unknown function (DUF915)
CMLPILML_01491	4.61e-308	pts13C	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
CMLPILML_01492	7.34e-54	-	-	-	-	-	-	-	-
CMLPILML_01493	1.52e-274	-	-	-	E	-	-	-	Major Facilitator Superfamily
CMLPILML_01494	2.47e-223	pbpX2	-	-	V	-	-	-	Beta-lactamase
CMLPILML_01495	0.0	dltD	-	-	M	ko:K03740	ko01503,ko02020,ko05150,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01504	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
CMLPILML_01496	3.63e-50	dltC	6.1.1.13	-	J	ko:K14188	ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01000,ko01504	Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
CMLPILML_01497	9.88e-305	dltB	-	-	M	ko:K03739	ko01503,ko02020,ko05150,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01504	MBOAT, membrane-bound O-acyltransferase family
CMLPILML_01498	0.0	dltA	6.1.1.13	-	H	ko:K03367	ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01000,ko01504	Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
CMLPILML_01499	9.7e-07	dltX	-	-	S	-	-	-	D-Ala-teichoic acid biosynthesis protein
CMLPILML_01500	4.82e-60	-	-	-	-	-	-	-	-
CMLPILML_01501	5.68e-260	-	-	-	S	-	-	-	Membrane
CMLPILML_01502	7.91e-78	-	-	-	-	-	-	-	-
CMLPILML_01503	8.97e-66	-	-	-	-	-	-	-	-
CMLPILML_01504	9.94e-60	-	-	-	-	-	-	-	-
CMLPILML_01506	2.47e-112	ykuL	-	-	S	-	-	-	(CBS) domain
CMLPILML_01507	0.0	cadA	-	-	P	-	-	-	P-type ATPase
CMLPILML_01508	1.39e-257	napA	-	-	P	-	-	-	Sodium/hydrogen exchanger family
CMLPILML_01510	0.0	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC transporter transmembrane region
CMLPILML_01511	1.24e-204	mutR	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
CMLPILML_01512	3.3e-36	-	-	-	-	-	-	-	-
CMLPILML_01513	8.28e-47	-	-	-	-	-	-	-	-
CMLPILML_01514	1.03e-155	pcp	3.4.19.3	-	O	ko:K01304	-	ko00000,ko01000,ko01002	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
CMLPILML_01515	1.75e-202	-	-	-	S	-	-	-	Protein of unknown function (DUF979)
CMLPILML_01516	3.9e-147	-	-	-	S	-	-	-	Protein of unknown function (DUF969)
CMLPILML_01517	1.66e-303	-	-	-	G	ko:K02775	ko00052,ko01100,ko02060,map00052,map01100,map02060	ko00000,ko00001,ko00002,ko02000	PTS system sugar-specific permease component
CMLPILML_01518	0.0	-	-	-	G	ko:K02775	ko00052,ko01100,ko02060,map00052,map01100,map02060	ko00000,ko00001,ko00002,ko02000	PTS system Galactitol-specific IIC component
CMLPILML_01519	8.25e-63	-	-	-	S	ko:K08996	-	ko00000	Protein of unknown function (DUF1440)
CMLPILML_01520	8.24e-137	-	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
CMLPILML_01521	7.17e-258	-	-	-	S	-	-	-	DUF218 domain
CMLPILML_01522	0.0	-	-	-	V	ko:K02003,ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
CMLPILML_01523	0.0	cydA	1.10.3.14	-	C	ko:K00425	ko00190,ko01100,ko02020,map00190,map01100,map02020	ko00000,ko00001,ko00002,ko01000	ubiquinol oxidase
CMLPILML_01524	1.05e-231	cydB	1.10.3.14	-	C	ko:K00426	ko00190,ko01100,ko02020,map00190,map01100,map02020	ko00000,ko00001,ko00002,ko01000	Cytochrome d ubiquinol oxidase subunit II
CMLPILML_01525	0.0	cydC	-	-	CO	ko:K16013	ko02010,map02010	ko00000,ko00001,ko02000	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
CMLPILML_01526	0.0	cydD	-	-	CO	ko:K16012	ko02010,map02010	ko00000,ko00001,ko02000	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
CMLPILML_01527	6.33e-226	menA	2.5.1.74	-	H	ko:K02548	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01006	1,4-dihydroxy-2-naphthoate
CMLPILML_01528	4.97e-313	-	-	-	G	ko:K02027	-	ko00000,ko00002,ko02000	Bacterial extracellular solute-binding protein
CMLPILML_01529	2.01e-214	phnD	-	-	P	ko:K02044	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter, phosphonate, periplasmic substrate-binding protein
CMLPILML_01530	2.8e-256	tcsA	-	-	S	ko:K02058,ko:K07335	-	ko00000,ko00002,ko02000	ABC transporter substrate-binding protein PnrA-like
CMLPILML_01531	8.85e-226	-	3.4.11.5	-	I	ko:K01259	ko00330,map00330	ko00000,ko00001,ko01000,ko01002	Releases the N-terminal proline from various substrates
CMLPILML_01532	9.29e-250	-	-	-	V	-	-	-	Beta-lactamase
CMLPILML_01533	0.0	pts29C	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
CMLPILML_01534	1.05e-203	gspK	-	-	G	-	-	-	BadF/BadG/BcrA/BcrD ATPase family
CMLPILML_01535	1.04e-270	-	-	-	S	ko:K09963	-	ko00000	Bacterial protein of unknown function (DUF871)
CMLPILML_01536	1.84e-196	-	-	-	S	-	-	-	Putative esterase
CMLPILML_01537	1.13e-249	ykfB	5.1.1.20	-	M	ko:K19802	-	ko00000,ko01000	Belongs to the mandelate racemase muconate lactonizing enzyme family
CMLPILML_01538	1.05e-171	-	3.5.2.6	-	V	ko:K17836	ko00311,ko01130,ko01501,map00311,map01130,map01501	ko00000,ko00001,ko00002,ko01000,ko01504	Beta-lactamase enzyme family
CMLPILML_01539	9.42e-202	murQ	4.2.1.126	-	G	ko:K07106	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
CMLPILML_01540	9.68e-173	-	-	-	S	ko:K07090	-	ko00000	membrane transporter protein
CMLPILML_01541	7.88e-24	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
CMLPILML_01542	2.53e-206	-	-	-	S	-	-	-	Aldo/keto reductase family
CMLPILML_01543	1.26e-172	nagB	3.5.99.6	-	G	ko:K02564	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
CMLPILML_01544	8.74e-155	dak	2.7.1.76	-	F	ko:K10353	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000	deoxynucleoside kinase
CMLPILML_01545	4.15e-162	dgk2	2.7.1.76	-	F	ko:K10353	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000	deoxynucleoside kinase
CMLPILML_01546	1.45e-303	lctO	1.13.12.4	-	C	ko:K00467,ko:K10530	ko00620,map00620	ko00000,ko00001,ko01000	L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases
CMLPILML_01547	6.61e-295	pbuG	-	-	S	ko:K06901	-	ko00000,ko02000	permease
CMLPILML_01549	1.78e-162	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
CMLPILML_01550	5.76e-296	pbuG	-	-	S	ko:K06901	-	ko00000,ko02000	permease
CMLPILML_01551	1.58e-60	-	-	-	I	-	-	-	bis(5'-adenosyl)-triphosphatase activity
CMLPILML_01552	7.1e-293	pbuG	-	-	S	ko:K06901	-	ko00000,ko02000	permease
CMLPILML_01553	8.45e-92	def2	3.5.1.88	-	J	ko:K01462	-	ko00000,ko01000	Removes the formyl group from the N-terminal Met of newly synthesized proteins
CMLPILML_01554	1.37e-116	-	-	-	-	-	-	-	-
CMLPILML_01555	2.26e-117	-	-	-	-	-	-	-	-
CMLPILML_01556	3.09e-102	atkY	-	-	K	ko:K02171	ko01501,map01501	ko00000,ko00001,ko00002,ko01504,ko03000	Penicillinase repressor
CMLPILML_01557	4.35e-86	-	-	-	S	-	-	-	Cupredoxin-like domain
CMLPILML_01558	6.31e-65	-	-	-	S	-	-	-	Cupredoxin-like domain
CMLPILML_01559	0.0	copA	3.6.3.3, 3.6.3.5, 3.6.3.54	-	P	ko:K01534,ko:K17686	ko01524,ko04016,map01524,map04016	ko00000,ko00001,ko01000	P-type ATPase
CMLPILML_01560	3.17e-200	ywdE	-	-	K	ko:K20375	ko02024,map02024	ko00000,ko00001,ko03000	Helix-turn-helix XRE-family like proteins
CMLPILML_01561	0.0	pepO	-	-	O	ko:K07386	-	ko00000,ko01000,ko01002	Peptidase family M13
CMLPILML_01562	0.0	-	-	-	E	-	-	-	Amino acid permease
CMLPILML_01563	0.0	speA	4.1.1.17, 4.1.1.18, 4.1.1.19	-	E	ko:K01581,ko:K01582,ko:K01585	ko00310,ko00330,ko00480,ko00960,ko01100,ko01110,ko01130,map00310,map00330,map00480,map00960,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Orn/Lys/Arg decarboxylase, C-terminal domain
CMLPILML_01564	1.67e-315	ynbB	-	-	P	-	-	-	aluminum resistance
CMLPILML_01565	1.13e-98	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
CMLPILML_01566	2.63e-296	-	-	-	EGP	ko:K08368	-	ko00000,ko02000	Sugar (and other) transporter
CMLPILML_01567	7.94e-90	-	-	-	S	-	-	-	Iron-sulphur cluster biosynthesis
CMLPILML_01568	0.0	mutS1	-	-	L	ko:K07456	ko03430,map03430	ko00000,ko00001,ko03400	Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
CMLPILML_01569	1.98e-149	crp2	-	-	K	ko:K10914,ko:K21562	ko02020,ko02024,ko02025,ko02026,ko05111,map02020,map02024,map02025,map02026,map05111	ko00000,ko00001,ko03000	helix_turn_helix, cAMP Regulatory protein
CMLPILML_01570	9.66e-138	-	-	-	-	-	-	-	-
CMLPILML_01571	3.24e-196	ywdE	-	-	K	ko:K20375	ko02024,map02024	ko00000,ko00001,ko03000	Transcriptional regulator
CMLPILML_01572	7.78e-267	-	-	-	EGP	-	-	-	Major facilitator Superfamily
CMLPILML_01573	0.0	eriC	-	-	P	ko:K03281	-	ko00000	chloride
CMLPILML_01574	0.0	gnd	1.1.1.343, 1.1.1.44	-	H	ko:K00033	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
CMLPILML_01575	0.0	pox1	1.2.3.3	-	EH	ko:K00158	ko00620,ko01100,map00620,map01100	ko00000,ko00001,ko01000	Belongs to the TPP enzyme family
CMLPILML_01576	0.0	gidA	-	-	D	ko:K03495	-	ko00000,ko03016,ko03036	NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
CMLPILML_01577	0.0	mnmE	-	-	S	ko:K03650	-	ko00000,ko01000,ko03016	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
CMLPILML_01578	1.7e-201	yidC	-	-	U	ko:K03217	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044,ko03029	Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
CMLPILML_01579	3.62e-79	rnpA	3.1.26.5	-	J	ko:K03536	-	ko00000,ko01000,ko03016	RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
CMLPILML_01580	6.59e-23	rpmH	-	-	J	ko:K02914	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL34 family
CMLPILML_01581	0.0	-	-	-	M	-	-	-	Rib/alpha-like repeat
CMLPILML_01582	7.94e-202	bglG5	-	-	K	ko:K03488	-	ko00000,ko03000	CAT RNA binding domain
CMLPILML_01583	0.0	pts33BCA	-	-	G	ko:K02755,ko:K02756,ko:K02757	ko02060,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
CMLPILML_01584	0.0	-	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
CMLPILML_01585	2.22e-206	-	-	-	EG	-	-	-	EamA-like transporter family
CMLPILML_01586	0.0	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
CMLPILML_01587	0.0	uvrA2	-	-	L	ko:K03701	ko03420,map03420	ko00000,ko00001,ko03400	excinuclease ABC, A subunit
CMLPILML_01588	1.73e-89	-	-	-	-	-	-	-	-
CMLPILML_01589	1.2e-30	-	-	-	M	-	-	-	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
CMLPILML_01590	4.41e-116	luxS	4.4.1.21	-	H	ko:K07173	ko00270,ko01100,ko01230,ko02024,ko02026,ko05111,map00270,map01100,map01230,map02024,map02026,map05111	ko00000,ko00001,ko00002,ko01000	Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
CMLPILML_01591	2.47e-275	metE	2.1.1.14	-	E	ko:K00549	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	methionine synthase, vitamin-B12 independent
CMLPILML_01592	3.52e-303	tcyP	-	-	U	ko:K06956	-	ko00000	Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
CMLPILML_01593	4.63e-169	-	-	-	S	-	-	-	PAS domain
CMLPILML_01594	5.83e-205	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
CMLPILML_01595	1.29e-69	mscL	-	-	M	ko:K03282	-	ko00000,ko02000	Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
CMLPILML_01596	3.06e-06	-	-	-	M	-	-	-	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
CMLPILML_01597	0.0	-	-	-	M	-	-	-	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
CMLPILML_01598	1.7e-188	pnuC	-	-	H	ko:K03811	-	ko00000,ko02000	nicotinamide mononucleotide transporter
CMLPILML_01599	1.83e-124	-	-	-	S	-	-	-	PAS domain
CMLPILML_01600	3.53e-314	yqjE	3.4.11.14, 3.4.11.4	-	E	ko:K01258,ko:K01263	-	ko00000,ko01000,ko01002	Cleaves the N-terminal amino acid of tripeptides
CMLPILML_01601	1.16e-97	-	-	-	S	-	-	-	Protein of unknown function (DUF3290)
CMLPILML_01602	7.18e-145	yviA	-	-	S	-	-	-	Protein of unknown function (DUF421)
CMLPILML_01603	5.38e-180	-	-	-	K	-	-	-	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
CMLPILML_01604	1.2e-236	-	2.7.7.7	-	L	ko:K02342	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	EXOIII
CMLPILML_01605	6.36e-257	ltrA	-	-	S	-	-	-	Bacterial low temperature requirement A protein (LtrA)
CMLPILML_01606	1.43e-97	dkgB	-	-	S	-	-	-	reductase
CMLPILML_01607	3.26e-17	dkgB	-	-	S	-	-	-	reductase
CMLPILML_01608	1.46e-202	endA	-	-	F	ko:K15051	-	ko00000	DNA RNA non-specific endonuclease
CMLPILML_01609	0.0	pepD1	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
CMLPILML_01610	9.81e-259	malK	-	-	P	ko:K10112,ko:K17240	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ATPases associated with a variety of cellular activities
CMLPILML_01611	4.34e-202	-	-	-	P	ko:K02025	-	ko00000,ko00002,ko02000	ABC-type sugar transport systems, permease components
CMLPILML_01612	3.39e-189	-	-	-	P	ko:K02026	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
CMLPILML_01613	0.0	-	-	-	S	-	-	-	Zn-dependent metallo-hydrolase RNA specificity domain
CMLPILML_01614	1.38e-311	-	-	-	G	ko:K02027	-	ko00000,ko00002,ko02000	Bacterial extracellular solute-binding protein
CMLPILML_01615	7.83e-74	-	-	-	S	ko:K08987	-	ko00000	Protein of unknown function (DUF1304)
CMLPILML_01616	1.84e-100	yybA	-	-	K	-	-	-	Transcriptional regulator
CMLPILML_01617	2.29e-125	XK27_03150	2.3.1.57	-	K	ko:K22441	-	ko00000,ko01000	Acetyltransferase (GNAT) domain
CMLPILML_01618	1.27e-104	yjcF	-	-	S	-	-	-	Acetyltransferase (GNAT) domain
CMLPILML_01619	1.59e-214	-	-	-	G	-	-	-	BadF/BadG/BcrA/BcrD ATPase family
CMLPILML_01620	8.18e-216	-	3.5.2.6	-	V	ko:K17836	ko00311,ko01130,ko01501,map00311,map01130,map01501	ko00000,ko00001,ko00002,ko01000,ko01504	Beta-lactamase enzyme family
CMLPILML_01621	3.6e-127	yobS	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
CMLPILML_01622	0.0	ydgH	-	-	S	ko:K06994	-	ko00000	MMPL family
CMLPILML_01623	3.15e-175	-	-	-	S	-	-	-	haloacid dehalogenase-like hydrolase
CMLPILML_01624	3.24e-159	-	-	-	S	-	-	-	SNARE associated Golgi protein
CMLPILML_01625	1.05e-229	-	-	-	-	-	-	-	-
CMLPILML_01626	0.0	gabD	1.2.1.16, 1.2.1.20, 1.2.1.79	-	C	ko:K00135	ko00250,ko00310,ko00350,ko00650,ko00760,ko01100,ko01120,map00250,map00310,map00350,map00650,map00760,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Belongs to the aldehyde dehydrogenase family
CMLPILML_01627	1.73e-184	plcR	-	-	K	ko:K20480	ko02024,map02024	ko00000,ko00001,ko03000	Helix-turn-helix
CMLPILML_01628	6.43e-196	-	-	-	I	-	-	-	alpha/beta hydrolase fold
CMLPILML_01629	1.03e-138	-	-	-	S	-	-	-	SNARE associated Golgi protein
CMLPILML_01630	3.29e-132	yjcK	2.3.1.128	-	J	ko:K03790	-	ko00000,ko01000,ko03009	Acetyltransferase (GNAT) domain
CMLPILML_01631	1.3e-301	serS	6.1.1.11	-	J	ko:K01875	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
CMLPILML_01632	0.0	ndvA	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter
CMLPILML_01633	2.39e-156	vanR	-	-	K	-	-	-	response regulator
CMLPILML_01634	1.85e-264	-	-	-	T	-	-	-	His Kinase A (phosphoacceptor) domain
CMLPILML_01635	0.0	murE	6.3.2.13, 6.3.2.7	-	M	ko:K01928,ko:K05362	ko00300,ko00550,ko01100,map00300,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
CMLPILML_01636	1.29e-184	racD	5.1.1.13	-	M	ko:K01779	ko00250,ko01054,map00250,map01054	ko00000,ko00001,ko01000	Belongs to the aspartate glutamate racemases family
CMLPILML_01637	9.23e-214	natA	-	-	S	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
CMLPILML_01638	1.07e-282	natB	-	-	CP	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 family transporter protein
CMLPILML_01639	0.0	agl	3.2.1.20	GH31	G	ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 31 family
CMLPILML_01640	4.79e-56	agl	3.2.1.20	GH31	G	ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 31 family
CMLPILML_01641	2.29e-175	fruR	-	-	K	ko:K03436	-	ko00000,ko03000	DeoR C terminal sensor domain
CMLPILML_01642	5.13e-214	pfkB	2.7.1.56	-	H	ko:K00882	ko00051,map00051	ko00000,ko00001,ko01000	Belongs to the carbohydrate kinase PfkB family. LacC subfamily
CMLPILML_01643	0.0	fruA	2.7.1.202	-	GT	ko:K02768,ko:K02769,ko:K02770	ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphotransferase System
CMLPILML_01644	0.0	-	-	-	M	-	-	-	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
CMLPILML_01645	2.02e-179	-	3.1.3.102, 3.1.3.104, 3.1.3.23	-	G	ko:K07757,ko:K20861	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Sucrose-6F-phosphate phosphohydrolase
CMLPILML_01646	4.8e-57	-	-	-	K	ko:K21903	-	ko00000,ko03000	helix_turn_helix, Arsenical Resistance Operon Repressor
CMLPILML_01647	3.83e-211	-	-	-	P	ko:K02077	-	ko00000,ko00002,ko02000	Belongs to the bacterial solute-binding protein 9 family
CMLPILML_01648	2.22e-152	adcC	-	-	P	ko:K02074,ko:K09817,ko:K11710	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter
CMLPILML_01649	8.87e-174	znuB	-	-	U	ko:K02075,ko:K09816	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC 3 transport family
CMLPILML_01650	0.0	lctP	-	-	C	ko:K03303	-	ko00000,ko02000	L-lactate permease
CMLPILML_01652	0.0	pepF	-	-	E	ko:K08602	-	ko00000,ko01000,ko01002	oligoendopeptidase F
CMLPILML_01653	1.04e-271	brpA	-	-	K	-	-	-	Cell envelope-like function transcriptional attenuator common domain protein
CMLPILML_01654	5.64e-54	-	-	-	-	-	-	-	-
CMLPILML_01655	9.18e-83	-	-	-	-	-	-	-	-
CMLPILML_01656	0.0	-	-	-	S	-	-	-	ABC transporter, ATP-binding protein
CMLPILML_01657	9.33e-179	-	-	-	S	-	-	-	Putative threonine/serine exporter
CMLPILML_01658	1.1e-103	-	-	-	S	-	-	-	Threonine/Serine exporter, ThrE
CMLPILML_01659	5.2e-54	-	-	-	-	-	-	-	-
CMLPILML_01660	3.75e-79	-	-	-	T	ko:K07171	-	ko00000,ko01000,ko02048	PemK-like, MazF-like toxin of type II toxin-antitoxin system
CMLPILML_01661	6.76e-106	-	-	-	-	-	-	-	-
CMLPILML_01662	3.52e-232	nrdF	1.17.4.1	-	F	ko:K00526	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CMLPILML_01663	3.86e-107	nrdI	-	-	F	ko:K03647	-	ko00000	NrdI Flavodoxin like
CMLPILML_01664	3.86e-143	-	-	-	-	-	-	-	-
CMLPILML_01665	0.0	-	-	-	S	-	-	-	O-antigen ligase like membrane protein
CMLPILML_01666	3.52e-58	-	-	-	-	-	-	-	-
CMLPILML_01667	5.01e-128	gmk2	2.7.4.8	-	F	ko:K00942	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko00002,ko01000	Guanylate kinase
CMLPILML_01669	3.06e-194	-	-	-	M	ko:K21471	-	ko00000,ko01000,ko01002,ko01011	NlpC P60 family protein
CMLPILML_01670	4.24e-298	-	-	-	S	-	-	-	Putative peptidoglycan binding domain
CMLPILML_01671	3.7e-299	hflX	-	-	S	ko:K03665	-	ko00000,ko03009	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
CMLPILML_01672	0.0	-	-	-	E	-	-	-	Amino Acid
CMLPILML_01673	4.63e-173	cysA	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
CMLPILML_01674	0.0	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	FtsX-like permease family
CMLPILML_01675	6.19e-162	gpm2	-	-	G	-	-	-	Phosphoglycerate mutase family
CMLPILML_01676	6e-35	-	-	-	-	-	-	-	-
CMLPILML_01677	5.76e-70	-	-	-	-	-	-	-	-
CMLPILML_01678	6.23e-191	exoA	3.1.11.2	-	L	ko:K01142	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	exodeoxyribonuclease III
CMLPILML_01679	0.0	ptsG	2.7.1.199, 2.7.1.208	-	G	ko:K02777,ko:K02778,ko:K02779,ko:K02790,ko:K02791	ko00010,ko00500,ko00520,ko02026,ko02060,ko05111,map00010,map00500,map00520,map02026,map02060,map05111	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system, EIIB
CMLPILML_01680	1.77e-67	ptsG	2.7.1.199, 2.7.1.208	-	G	ko:K02777,ko:K02778,ko:K02779,ko:K02790,ko:K02791	ko00010,ko00500,ko00520,ko02026,ko02060,ko05111,map00010,map00500,map00520,map02026,map02060,map05111	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system, EIIB
CMLPILML_01681	2.81e-165	nanE	5.1.3.9	-	G	ko:K01788	ko00520,map00520	ko00000,ko00001,ko01000	Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
CMLPILML_01682	1.38e-186	-	-	-	K	-	-	-	Helix-turn-helix domain, rpiR family
CMLPILML_01683	4.84e-60	dacA	3.4.16.4	-	M	ko:K07258	ko00550,ko01100,map00550,map01100	ko00000,ko00001,ko01000,ko01002,ko01011	Belongs to the peptidase S11 family
CMLPILML_01684	0.0	-	-	-	M	-	-	-	ErfK YbiS YcfS YnhG
CMLPILML_01685	4.12e-316	pacL3	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	P-type ATPase
CMLPILML_01686	4.02e-208	pacL3	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	P-type ATPase
CMLPILML_01688	7.5e-153	XK27_08875	-	-	O	-	-	-	PFAM peptidase M10A and M12B, matrixin and adamalysin
CMLPILML_01689	0.0	helD	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	DNA helicase
CMLPILML_01690	9.08e-176	-	-	-	S	-	-	-	Peptidase_C39 like family
CMLPILML_01691	1.97e-159	-	-	-	K	-	-	-	Helix-turn-helix domain, rpiR family
CMLPILML_01692	4.36e-105	-	-	-	L	-	-	-	MgsA AAA+ ATPase C terminal
CMLPILML_01693	3.14e-311	lacE	2.7.1.207	-	G	ko:K02761,ko:K02787,ko:K02788	ko00052,ko00500,ko01100,ko02060,map00052,map00500,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
CMLPILML_01694	9.65e-135	-	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase
CMLPILML_01695	7.9e-212	coaA	2.7.1.33	-	F	ko:K00867	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Pantothenic acid kinase
CMLPILML_01696	3.93e-134	efp	-	-	J	ko:K02356	-	ko00000,ko03012	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
CMLPILML_01697	6.61e-190	yycI	-	-	S	-	-	-	YycH protein
CMLPILML_01698	6.41e-193	vicX	3.1.26.11	-	S	ko:K00784	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	domain protein
CMLPILML_01699	1.04e-263	htrA	3.4.21.107	-	O	ko:K04771	ko01503,ko02020,map01503,map02020	ko00000,ko00001,ko00002,ko01000,ko01002,ko03110	serine protease
CMLPILML_01700	3.66e-108	rlmH	2.1.1.177	-	J	ko:K00783	-	ko00000,ko01000,ko03009	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
CMLPILML_01701	2.2e-142	-	-	-	P	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Cobalt transport protein
CMLPILML_01702	0.0	-	-	-	S	ko:K16786,ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
CMLPILML_01703	3.01e-124	ykoE	-	-	S	ko:K16925	-	ko00000,ko00002,ko02000	ABC-type cobalt transport system, permease component
CMLPILML_01704	3.49e-219	-	-	-	K	-	-	-	helix_turn_helix, arabinose operon control protein
CMLPILML_01705	5.77e-191	htpX	-	-	O	ko:K03799	-	ko00000,ko00002,ko01000,ko01002	Belongs to the peptidase M48B family
CMLPILML_01706	7.65e-125	lemA	-	-	S	ko:K03744	-	ko00000	LemA family
CMLPILML_01707	4.66e-240	ysdE	-	-	P	-	-	-	Citrate transporter
CMLPILML_01708	6.45e-91	-	-	-	S	-	-	-	Iron-sulphur cluster biosynthesis
CMLPILML_01709	1.14e-23	-	-	-	-	-	-	-	-
CMLPILML_01710	1.57e-199	-	-	-	-	-	-	-	-
CMLPILML_01712	4.47e-313	-	-	-	M	-	-	-	Glycosyl transferase
CMLPILML_01713	1.09e-272	-	-	-	G	-	-	-	Glycosyl hydrolases family 8
CMLPILML_01714	2.61e-153	yfbR	-	-	S	ko:K07023	-	ko00000	HD containing hydrolase-like enzyme
CMLPILML_01715	2.73e-208	-	-	-	L	-	-	-	HNH nucleases
CMLPILML_01716	7.38e-177	glnQ	-	-	E	ko:K17076	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
CMLPILML_01717	0.0	XK27_05795	-	-	P	ko:K17073,ko:K17074	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
CMLPILML_01718	3.97e-136	yxlJ	3.2.2.21	-	L	ko:K03652	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Belongs to the DNA glycosylase MPG family
CMLPILML_01719	5.23e-85	yeaO	-	-	S	-	-	-	Protein of unknown function, DUF488
CMLPILML_01720	2.16e-168	terC	-	-	P	-	-	-	Integral membrane protein TerC family
CMLPILML_01721	5.26e-123	adaB	2.1.1.63	-	L	ko:K00567,ko:K10778,ko:K13531	-	ko00000,ko01000,ko03000,ko03400	6-O-methylguanine DNA methyltransferase, DNA binding domain
CMLPILML_01722	1.63e-172	cobB	-	-	K	ko:K12410	-	ko00000,ko01000	SIR2 family
CMLPILML_01723	1.33e-104	-	-	-	-	-	-	-	-
CMLPILML_01724	0.0	cls	-	-	I	ko:K06131	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CMLPILML_01725	1.81e-159	yugP	-	-	S	ko:K06973	-	ko00000	Putative neutral zinc metallopeptidase
CMLPILML_01726	2.39e-225	-	-	-	S	-	-	-	Alpha/beta hydrolase of unknown function (DUF915)
CMLPILML_01727	3.86e-187	rnhA	3.1.26.4	-	L	ko:K03469	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
CMLPILML_01728	4.75e-219	-	-	-	S	-	-	-	Protein of unknown function (DUF1002)
CMLPILML_01729	1.5e-85	-	-	-	M	-	-	-	Glycosyltransferase like family 2
CMLPILML_01730	0.0	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
CMLPILML_01731	0.0	-	-	-	M	-	-	-	domain protein
CMLPILML_01732	0.0	-	-	-	E	ko:K20265	ko02024,map02024	ko00000,ko00001,ko02000	amino acid
CMLPILML_01733	1.37e-220	-	-	-	K	-	-	-	LysR substrate binding domain
CMLPILML_01734	0.0	-	1.3.5.4	-	C	ko:K00244	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	ko00000,ko00001,ko00002,ko01000	FAD binding domain
CMLPILML_01735	1.55e-309	brnQ	-	-	U	ko:K03311	-	ko00000	Component of the transport system for branched-chain amino acids
CMLPILML_01736	1.1e-170	menG	2.1.1.163, 2.1.1.201	-	H	ko:K03183	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
CMLPILML_01737	4.14e-229	pepR	3.4.11.5	-	E	ko:K01259	ko00330,map00330	ko00000,ko00001,ko01000,ko01002	Releases the N-terminal proline from various substrates
CMLPILML_01738	1.18e-124	-	-	-	S	-	-	-	Peptidase propeptide and YPEB domain
CMLPILML_01739	1.24e-192	-	3.5.1.24	-	M	ko:K01442	ko00120,ko00121,ko01100,map00120,map00121,map01100	ko00000,ko00001,ko01000	Linear amide C-N hydrolases, choloylglycine hydrolase family
CMLPILML_01740	1.33e-19	-	3.5.1.24	-	M	ko:K01442	ko00120,ko00121,ko01100,map00120,map00121,map01100	ko00000,ko00001,ko01000	Linear amide C-N hydrolases, choloylglycine hydrolase family
CMLPILML_01741	0.0	-	-	-	P	-	-	-	Major Facilitator Superfamily
CMLPILML_01742	2.13e-75	-	-	-	P	-	-	-	Major Facilitator Superfamily
CMLPILML_01743	2.48e-166	-	-	-	P	-	-	-	Major Facilitator Superfamily
CMLPILML_01744	1.42e-211	arbZ	-	-	I	-	-	-	Phosphate acyltransferases
CMLPILML_01745	2.51e-236	-	-	-	M	-	-	-	Glycosyl transferase family 8
CMLPILML_01746	3.05e-235	-	-	-	M	-	-	-	Glycosyl transferase family 8
CMLPILML_01747	9.16e-202	arbx	-	-	M	-	-	-	Glycosyl transferase family 8
CMLPILML_01748	7.51e-194	-	-	-	I	-	-	-	Acyl-transferase
CMLPILML_01751	3.03e-167	yycF	-	-	K	ko:K07668	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	response regulator
CMLPILML_01752	4.37e-119	vicK	2.7.13.3	-	T	ko:K07652	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
CMLPILML_01753	1.8e-134	-	-	-	-	-	-	-	-
CMLPILML_01754	1.41e-120	-	-	-	-	-	-	-	-
CMLPILML_01755	3.3e-201	ycsE	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
CMLPILML_01756	7.98e-172	ung	3.2.2.27	-	L	ko:K03648	ko03410,ko05340,map03410,map05340	ko00000,ko00001,ko01000,ko03400	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
CMLPILML_01757	1.82e-229	pta	2.3.1.8, 3.6.3.21	-	C	ko:K00625,ko:K02028	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000,ko02000	phosphate acetyltransferase
CMLPILML_01758	2.49e-110	ydiB	-	-	O	ko:K06925	-	ko00000,ko03016	Hydrolase, P-loop family
CMLPILML_01759	3.17e-129	dnaQ	2.7.7.7	-	L	ko:K02342	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III
CMLPILML_01760	3.45e-211	murB	1.3.1.98	-	M	ko:K00075	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation
CMLPILML_01761	1.25e-264	potA	3.6.3.30, 3.6.3.31	-	P	ko:K02010,ko:K11072	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
CMLPILML_01762	1.04e-180	potB	-	-	P	ko:K11071	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
CMLPILML_01763	5.35e-176	potC	-	-	P	ko:K11070	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
CMLPILML_01764	1.71e-266	potD	-	-	P	ko:K11069	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
CMLPILML_01765	1.29e-196	dacA	2.7.7.85	-	S	ko:K18672	-	ko00000,ko01000	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
CMLPILML_01766	1.55e-224	ybbR	-	-	S	-	-	-	YbbR-like protein
CMLPILML_01767	0.0	glmM	5.4.2.10	-	G	ko:K03431	ko00520,ko01100,ko01130,map00520,map01100,map01130	ko00000,ko00001,ko01000	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
CMLPILML_01768	8.42e-191	-	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
CMLPILML_01769	2.49e-87	crcB1	-	-	U	ko:K06199	-	ko00000,ko02000	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
CMLPILML_01770	1.13e-81	crcB	-	-	U	ko:K06199	-	ko00000,ko02000	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
CMLPILML_01771	7.23e-242	-	-	-	S	-	-	-	Putative adhesin
CMLPILML_01772	5.95e-149	-	-	-	-	-	-	-	-
CMLPILML_01773	1.07e-192	-	-	-	S	-	-	-	Alpha/beta hydrolase family
CMLPILML_01774	2.74e-210	-	-	-	P	ko:K02077	-	ko00000,ko00002,ko02000	Belongs to the bacterial solute-binding protein 9 family
CMLPILML_01775	5.59e-276	coaBC	4.1.1.36, 6.3.2.5	-	H	ko:K01598,ko:K13038	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
CMLPILML_01776	1.11e-126	-	-	-	S	-	-	-	VanZ like family
CMLPILML_01777	2.13e-171	yebC	-	-	K	-	-	-	Transcriptional regulatory protein
CMLPILML_01778	7.04e-230	comGA	-	-	NU	ko:K02243	-	ko00000,ko00002,ko02044	Type II IV secretion system protein
CMLPILML_01779	1.65e-226	comGB	-	-	NU	ko:K02244	-	ko00000,ko00002,ko02044	type II secretion system
CMLPILML_01780	4.94e-54	comGC	-	-	U	ko:K02245,ko:K02456	ko03070,ko05111,map03070,map05111	ko00000,ko00001,ko00002,ko02044	Required for transformation and DNA binding
CMLPILML_01781	1.45e-88	-	-	-	-	ko:K02246	-	ko00000,ko00002,ko02044	-
CMLPILML_01783	3.17e-113	-	-	-	U	ko:K02248	-	ko00000,ko00002,ko02044	Putative Competence protein ComGF
CMLPILML_01784	1.48e-186	ytxK	2.1.1.72	-	L	ko:K00571	-	ko00000,ko01000,ko02048	N-6 DNA Methylase
CMLPILML_01785	2.51e-33	ytxK	2.1.1.72	-	L	ko:K00571	-	ko00000,ko01000,ko02048	N-6 DNA Methylase
CMLPILML_01786	5.13e-287	ackA	2.7.2.1	-	F	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
CMLPILML_01788	1.02e-14	sacB	2.4.1.10, 2.4.1.9	GH68	M	ko:K00692,ko:K20811	ko00500,ko01100,ko02020,map00500,map01100,map02020	ko00000,ko00001,ko01000,ko01003	Levansucrase/Invertase
CMLPILML_01789	2.39e-229	lacR	-	-	K	ko:K02529	-	ko00000,ko03000	Transcriptional regulator
CMLPILML_01790	1.77e-286	galK	2.7.1.6	-	F	ko:K00849	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
CMLPILML_01791	0.0	galT	2.7.7.12	-	G	ko:K00965	ko00052,ko00520,ko01100,ko04917,map00052,map00520,map01100,map04917	ko00000,ko00001,ko00002,ko01000	UDP-glucose--hexose-1-phosphate uridylyltransferase
CMLPILML_01792	1.66e-247	galM	5.1.3.3	-	G	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the interconversion of alpha and beta anomers of maltose
CMLPILML_01793	0.0	pgm	5.4.2.2	-	G	ko:K01835	ko00010,ko00030,ko00052,ko00230,ko00500,ko00520,ko00521,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00052,map00230,map00500,map00520,map00521,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
CMLPILML_01794	0.0	uvrB	-	-	L	ko:K03702	ko03420,map03420	ko00000,ko00001,ko03400	damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
CMLPILML_01795	0.0	uvrA	-	-	L	ko:K03701	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
CMLPILML_01796	1.44e-117	-	-	-	S	-	-	-	Short repeat of unknown function (DUF308)
CMLPILML_01797	3.19e-206	yvcJ	-	-	S	ko:K06958	-	ko00000,ko03019	Displays ATPase and GTPase activities
CMLPILML_01798	1.88e-246	yvcK	-	-	S	-	-	-	Required for morphogenesis under gluconeogenic growth conditions
CMLPILML_01799	8.24e-220	whiA	-	-	K	ko:K09762	-	ko00000	May be required for sporulation
CMLPILML_01800	3.74e-130	clpP	3.4.21.92	-	O	ko:K01358	ko04112,ko04212,map04112,map04212	ko00000,ko00001,ko01000,ko01002	Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
CMLPILML_01801	0.0	ycaM	-	-	E	-	-	-	amino acid
CMLPILML_01803	2.15e-237	cggR	-	-	K	ko:K05311	-	ko00000,ko03000	Putative sugar-binding domain
CMLPILML_01804	4.74e-243	gap	1.2.1.12	-	G	ko:K00134	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
CMLPILML_01805	1.42e-286	pgk	2.7.2.3	-	F	ko:K00927	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the phosphoglycerate kinase family
CMLPILML_01806	8.39e-182	tpiA	5.3.1.1	-	G	ko:K01803	ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
CMLPILML_01807	1.18e-311	eno	4.2.1.11	-	G	ko:K01689	ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066	ko00000,ko00001,ko00002,ko01000,ko03019,ko04147	Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
CMLPILML_01808	1.07e-39	secG	-	-	U	ko:K03075	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Preprotein translocase
CMLPILML_01809	0.0	rnr	-	-	J	ko:K12573	ko03018,map03018	ko00000,ko00001,ko01000,ko03016,ko03019	3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
CMLPILML_01810	7.24e-102	smpB	-	-	J	ko:K03664	-	ko00000	the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
CMLPILML_01811	1.38e-138	-	-	-	K	ko:K06977	-	ko00000	acetyltransferase
CMLPILML_01813	2.49e-201	-	-	-	-	-	-	-	-
CMLPILML_01814	5.74e-71	aroD	1.1.1.25, 4.2.1.10	-	E	ko:K03785,ko:K13832	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	3-dehydroquinate dehydratase activity
CMLPILML_01815	4.62e-223	-	-	-	C	-	-	-	Domain of unknown function (DUF4931)
CMLPILML_01816	9.8e-197	-	-	-	K	-	-	-	Helix-turn-helix domain, rpiR family
CMLPILML_01817	2.92e-183	-	3.5.2.6	-	V	ko:K17836	ko00311,ko01130,ko01501,map00311,map01130,map01501	ko00000,ko00001,ko00002,ko01000,ko01504	Beta-lactamase enzyme family
CMLPILML_01818	0.0	glpQ	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	Membrane domain of glycerophosphoryl diester phosphodiesterase
CMLPILML_01819	6.19e-208	-	-	-	O	-	-	-	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CMLPILML_01820	4.68e-168	-	-	-	-	-	-	-	-
CMLPILML_01821	4.81e-69	-	-	-	-	-	-	-	-
CMLPILML_01822	3.01e-181	XK27_08125	-	-	S	ko:K09861	-	ko00000	Belongs to the UPF0246 family
CMLPILML_01823	1.58e-138	-	-	-	S	-	-	-	Protein of unknown function (DUF975)
CMLPILML_01824	1.53e-181	-	-	-	S	ko:K06889	-	ko00000	Alpha/beta hydrolase family
CMLPILML_01825	8.8e-149	-	-	-	G	-	-	-	Phosphoglycerate mutase family
CMLPILML_01826	9.98e-146	-	-	-	G	-	-	-	phosphoglycerate mutase
CMLPILML_01827	2.72e-119	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
CMLPILML_01828	2.91e-234	yxeA	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter permease
CMLPILML_01829	3.67e-154	lolD	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
CMLPILML_01830	5.09e-203	-	-	-	K	ko:K03488	-	ko00000,ko03000	CAT RNA binding domain
CMLPILML_01831	0.0	-	-	-	G	ko:K02755,ko:K02756,ko:K02757	ko02060,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
CMLPILML_01832	0.0	-	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
CMLPILML_01833	0.0	pepD4	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
CMLPILML_01834	6.73e-51	-	-	-	-	-	-	-	-
CMLPILML_01835	6.92e-141	-	-	-	K	-	-	-	WHG domain
CMLPILML_01836	9.4e-128	azo1	1.5.1.36, 1.7.1.6	-	S	ko:K03206,ko:K19784,ko:K22393	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	NADPH-dependent FMN reductase
CMLPILML_01837	4.45e-128	azr	1.5.1.36	-	S	ko:K22394	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	NADPH-dependent FMN reductase
CMLPILML_01838	3.26e-254	-	4.2.1.126	-	S	ko:K07106,ko:K09963	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Bacterial protein of unknown function (DUF871)
CMLPILML_01839	1.06e-192	-	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Tyrosine phosphatase family
CMLPILML_01840	1.33e-227	apbE	2.7.1.180	-	H	ko:K03734	-	ko00000,ko01000	Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
CMLPILML_01841	1.5e-123	cvpA	-	-	S	-	-	-	Colicin V production protein
CMLPILML_01843	1.51e-236	manL	2.7.1.191	-	G	ko:K02793,ko:K02794	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system sorbose subfamily IIB component
CMLPILML_01844	1.23e-166	manY	-	-	G	ko:K02746,ko:K02795	ko00051,ko00052,ko00520,ko01100,ko02060,map00051,map00052,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	PTS system
CMLPILML_01845	2.46e-219	manN	-	-	G	ko:K02796	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	system, mannose fructose sorbose family IID component
CMLPILML_01846	4.26e-86	-	-	-	S	-	-	-	Domain of unknown function (DUF956)
CMLPILML_01847	0.0	yifK	-	-	E	ko:K03293	-	ko00000	Amino acid permease
CMLPILML_01848	1.01e-311	yifK	-	-	E	ko:K03293	-	ko00000	Amino acid permease
CMLPILML_01849	1.02e-177	puuD	-	-	S	ko:K07010	-	ko00000,ko01002	peptidase C26
CMLPILML_01850	6.26e-306	-	-	-	E	-	-	-	amino acid
CMLPILML_01851	3.99e-299	-	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
CMLPILML_01852	6.86e-246	asnA	6.3.1.1	-	F	ko:K01914	ko00250,ko00460,ko01100,ko01110,ko01230,map00250,map00460,map01100,map01110,map01230	ko00000,ko00001,ko01000	aspartate--ammonia ligase
CMLPILML_01853	1.52e-207	-	-	-	EG	-	-	-	EamA-like transporter family
CMLPILML_01854	0.0	yhdG	-	-	E	ko:K03294	-	ko00000	Amino Acid
CMLPILML_01855	8.43e-170	cobQ	-	-	S	ko:K07009	-	ko00000	glutamine amidotransferase
CMLPILML_01856	1.38e-192	thiD	2.7.1.49, 2.7.4.7	-	H	ko:K00941	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Phosphomethylpyrimidine kinase
CMLPILML_01857	2.82e-188	-	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Tyrosine phosphatase family
CMLPILML_01858	1.19e-236	scrR	-	-	K	ko:K02529,ko:K03484	-	ko00000,ko03000	Transcriptional regulator, LacI family
CMLPILML_01859	0.0	scrB	3.2.1.26	GH32	G	ko:K01193	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	invertase
CMLPILML_01860	0.0	scrA	2.7.1.211	-	G	ko:K02808,ko:K02809,ko:K02810	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
CMLPILML_01861	1.59e-120	ymdB	-	-	S	-	-	-	Macro domain protein
CMLPILML_01862	0.0	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC transporter transmembrane region
CMLPILML_01863	2.4e-160	puuD	-	-	S	ko:K07010	-	ko00000,ko01002	peptidase C26
CMLPILML_01864	1.31e-287	mdtG2	-	-	EGP	ko:K08161	-	ko00000,ko02000	Transporter, major facilitator family protein
CMLPILML_01865	6.11e-129	-	4.1.1.44	-	S	ko:K01607	ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220	ko00000,ko00001,ko01000	decarboxylase
CMLPILML_01866	0.0	-	-	-	S	-	-	-	TerB-C domain
CMLPILML_01867	0.0	-	-	-	P	-	-	-	P-loop Domain of unknown function (DUF2791)
CMLPILML_01868	0.0	-	-	-	L	ko:K03724	-	ko00000,ko01000,ko03400	DEAD DEAH box helicase
CMLPILML_01869	1.75e-296	cycA	-	-	E	ko:K03293,ko:K11737	-	ko00000,ko02000	Amino acid permease
CMLPILML_01870	3.99e-256	adhE	1.1.1.1, 1.2.1.10	-	C	ko:K04072	ko00010,ko00071,ko00350,ko00620,ko00625,ko00626,ko00650,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00620,map00625,map00626,map00650,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	belongs to the iron- containing alcohol dehydrogenase family
CMLPILML_01871	0.0	adhE	1.1.1.1, 1.2.1.10	-	C	ko:K04072	ko00010,ko00071,ko00350,ko00620,ko00625,ko00626,ko00650,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00620,map00625,map00626,map00650,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	belongs to the iron- containing alcohol dehydrogenase family
CMLPILML_01872	1.41e-93	-	-	-	-	-	-	-	-