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ORF_ID	e_value	Gene_name	EC_number	CAZy	COGs	KEGG_ko	KEGG_Pathway	BRITE	Description
APMKGJCD_00001	4.46e-167	nagB	3.5.99.6	-	G	ko:K02564	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
APMKGJCD_00002	0.0	-	-	CBM50	NU	ko:K02395,ko:K19223	-	ko00000,ko01000,ko01002,ko01011,ko02035	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
APMKGJCD_00003	0.0	cadA	3.6.3.3, 3.6.3.5	-	P	ko:K01534	-	ko00000,ko01000	P-type ATPase
APMKGJCD_00004	4.81e-127	dpsB	-	-	P	-	-	-	Belongs to the Dps family
APMKGJCD_00005	2.09e-45	copZ	-	-	P	-	-	-	Heavy-metal-associated domain
APMKGJCD_00006	5.68e-258	tagH	3.6.3.40	-	GM	ko:K09693	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex TagGH involved in teichoic acids export. Responsible for energy coupling to the transport system
APMKGJCD_00007	3.14e-66	-	-	-	-	-	-	-	-
APMKGJCD_00008	9.38e-151	-	-	-	S	-	-	-	Iron Transport-associated domain
APMKGJCD_00009	1.43e-255	-	-	-	M	-	-	-	Iron Transport-associated domain
APMKGJCD_00010	9.62e-154	-	-	-	M	ko:K14193	ko05150,map05150	ko00000,ko00001	Iron Transport-associated domain
APMKGJCD_00011	1.12e-209	isdE	-	-	P	ko:K02016	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Periplasmic binding protein
APMKGJCD_00012	8.57e-222	isdF	-	-	U	ko:K02015	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
APMKGJCD_00013	3.16e-182	fepC	3.6.3.34	-	HP	ko:K02013	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
APMKGJCD_00014	8.23e-219	ppx	3.6.1.11, 3.6.1.40	-	FP	ko:K01524	ko00230,map00230	ko00000,ko00001,ko01000	exopolyphosphatase
APMKGJCD_00015	0.0	ppk	2.7.4.1	-	P	ko:K00937	ko00190,ko03018,map00190,map03018	ko00000,ko00001,ko01000,ko03019	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
APMKGJCD_00016	0.0	ppx3	3.6.1.11, 3.6.1.40	-	FP	ko:K01524	ko00230,map00230	ko00000,ko00001,ko01000	exopolyphosphatase
APMKGJCD_00017	1.51e-195	-	-	-	M	ko:K07271	-	ko00000,ko01000	LicD family
APMKGJCD_00018	1.13e-113	-	-	-	S	-	-	-	Domain of unknown function (DUF5067)
APMKGJCD_00019	8.55e-99	-	-	-	K	-	-	-	Transcriptional regulator
APMKGJCD_00020	2.39e-34	-	-	-	-	-	-	-	-
APMKGJCD_00021	3.21e-104	-	-	-	O	-	-	-	OsmC-like protein
APMKGJCD_00022	2.26e-33	-	-	-	-	-	-	-	-
APMKGJCD_00024	1.47e-74	-	-	-	S	ko:K08987	-	ko00000	Protein of unknown function (DUF1304)
APMKGJCD_00025	7.33e-115	-	-	-	-	-	-	-	-
APMKGJCD_00026	0.0	fumC	4.2.1.2	-	C	ko:K01679	ko00020,ko00620,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko04934,ko05200,ko05211,map00020,map00620,map00720,map01100,map01110,map01120,map01130,map01200,map04934,map05200,map05211	ko00000,ko00001,ko00002,ko01000	Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
APMKGJCD_00027	0.0	dapE	3.5.1.18	-	E	ko:K01439	ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Peptidase dimerisation domain
APMKGJCD_00028	8.03e-44	-	-	-	K	ko:K02529	-	ko00000,ko03000	helix_turn _helix lactose operon repressor
APMKGJCD_00029	1.66e-61	-	-	-	K	ko:K02529	-	ko00000,ko03000	helix_turn _helix lactose operon repressor
APMKGJCD_00030	3.14e-130	-	-	-	S	-	-	-	Putative glutamine amidotransferase
APMKGJCD_00031	3.52e-172	-	-	-	S	ko:K09936	ko02024,map02024	ko00000,ko00001,ko02000	protein conserved in bacteria
APMKGJCD_00032	1.01e-188	-	3.5.1.24	-	M	ko:K01442	ko00120,ko00121,ko01100,map00120,map00121,map01100	ko00000,ko00001,ko01000	Linear amide C-N hydrolases, choloylglycine hydrolase family
APMKGJCD_00033	9.45e-300	arcA	3.5.3.6	-	E	ko:K01478	ko00220,ko01100,ko01110,ko01130,map00220,map01100,map01110,map01130	ko00000,ko00001,ko01000	Arginine
APMKGJCD_00034	5.43e-57	-	-	-	-	-	-	-	-
APMKGJCD_00037	1.15e-189	yclJ	-	-	K	ko:K02483	-	ko00000,ko02022	response regulator
APMKGJCD_00038	0.0	yclK	-	-	T	-	-	-	Histidine kinase
APMKGJCD_00039	1.32e-269	ywbD	2.1.1.191	-	J	ko:K06969	-	ko00000,ko01000,ko03009	S-adenosylmethionine-dependent methyltransferase
APMKGJCD_00040	1.06e-198	glcU	-	-	U	ko:K05340	-	ko00000,ko02000	sugar transport
APMKGJCD_00041	0.0	pgi	5.3.1.9	-	G	ko:K01810	ko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the GPI family
APMKGJCD_00042	0.0	yfhO	-	-	S	-	-	-	Bacterial membrane protein YfhO
APMKGJCD_00043	8.95e-105	tspO	-	-	T	ko:K05770	ko04080,ko04214,ko04979,ko05166,map04080,map04214,map04979,map05166	ko00000,ko00001,ko02000	TspO/MBR family
APMKGJCD_00046	3.84e-259	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
APMKGJCD_00051	3.15e-134	-	-	-	L	-	-	-	DNA replication protein
APMKGJCD_00052	1.68e-309	-	-	-	S	-	-	-	Virulence-associated protein E
APMKGJCD_00053	8.12e-72	-	-	-	-	-	-	-	-
APMKGJCD_00056	8.5e-67	-	-	-	L	ko:K07451	-	ko00000,ko01000,ko02048	Phage-associated protein
APMKGJCD_00057	1.09e-99	-	-	-	L	-	-	-	overlaps another CDS with the same product name
APMKGJCD_00058	0.0	terL	-	-	S	-	-	-	overlaps another CDS with the same product name
APMKGJCD_00060	3.74e-245	-	-	-	S	-	-	-	Phage portal protein
APMKGJCD_00061	0.0	-	-	-	S	ko:K06904	-	ko00000	Caudovirus prohead serine protease
APMKGJCD_00062	1.56e-42	-	-	-	S	-	-	-	Phage gp6-like head-tail connector protein
APMKGJCD_00063	2.59e-55	-	-	-	-	-	-	-	-
APMKGJCD_00064	7.03e-40	cspA	-	-	K	ko:K03704	-	ko00000,ko03000	Cold shock protein
APMKGJCD_00065	2.65e-220	-	-	-	S	-	-	-	NAD:arginine ADP-ribosyltransferase
APMKGJCD_00066	3.95e-252	ysdE	-	-	P	-	-	-	Citrate transporter
APMKGJCD_00067	1.1e-157	-	-	-	T	-	-	-	Putative diguanylate phosphodiesterase
APMKGJCD_00068	1.16e-191	-	-	-	T	-	-	-	diguanylate cyclase
APMKGJCD_00069	3.9e-29	-	-	-	-	-	-	-	-
APMKGJCD_00070	5.22e-75	-	-	-	-	-	-	-	-
APMKGJCD_00071	0.0	ycfI	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter, ATP-binding protein
APMKGJCD_00072	0.0	yfiC	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter
APMKGJCD_00073	8.97e-253	ampC	-	-	V	-	-	-	Beta-lactamase
APMKGJCD_00074	9.09e-173	cobQ	-	-	S	ko:K07009	-	ko00000	glutamine amidotransferase
APMKGJCD_00075	0.0	murE2	6.3.2.13	-	M	ko:K01928	ko00300,ko00550,map00300,map00550	ko00000,ko00001,ko01000,ko01011	Mur ligase, middle domain
APMKGJCD_00076	7.63e-143	tdk	2.7.1.21	-	F	ko:K00857	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	thymidine kinase
APMKGJCD_00077	2.77e-249	prfA	-	-	J	ko:K02835	-	ko00000,ko03012	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
APMKGJCD_00078	4.34e-200	prmC	2.1.1.297	-	J	ko:K02493	-	ko00000,ko01000,ko03012	Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
APMKGJCD_00079	4.74e-243	ywlC	2.7.7.87	-	J	ko:K07566	-	ko00000,ko01000,ko03009,ko03016	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
APMKGJCD_00080	4.47e-295	glyA	2.1.2.1	-	E	ko:K00600	ko00260,ko00460,ko00630,ko00670,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko01523,map00260,map00460,map00630,map00670,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map01523	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
APMKGJCD_00081	1.3e-146	upp	2.4.2.9	-	F	ko:K00761	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
APMKGJCD_00082	1.55e-162	atpB	-	-	C	ko:K02108	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko03110	it plays a direct role in the translocation of protons across the membrane
APMKGJCD_00083	7.38e-37	atpE	-	-	C	ko:K02110	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
APMKGJCD_00084	6.24e-83	atpF	-	-	C	ko:K02109	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
APMKGJCD_00085	4.44e-117	atpH	-	-	C	ko:K02113	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
APMKGJCD_00086	0.0	atpA	3.6.3.14	-	C	ko:K02111	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko01000	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
APMKGJCD_00087	1.07e-208	atpG	-	-	C	ko:K02115	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
APMKGJCD_00088	0.0	atpD	3.6.3.14	-	C	ko:K02112	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko01000	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
APMKGJCD_00089	4.49e-88	atpC	-	-	C	ko:K02114	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Produces ATP from ADP in the presence of a proton gradient across the membrane
APMKGJCD_00090	1.11e-45	ywzB	-	-	S	-	-	-	Protein of unknown function (DUF1146)
APMKGJCD_00091	5e-310	murA	2.5.1.7	-	M	ko:K00790	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
APMKGJCD_00092	4.82e-230	mbl	-	-	D	ko:K03569	-	ko00000,ko02048,ko03036,ko04812	Cell shape determining protein MreB Mrl
APMKGJCD_00093	1.11e-69	ytjA	-	-	S	ko:K08998	-	ko00000	Could be involved in insertion of integral membrane proteins into the membrane
APMKGJCD_00094	9.66e-46	-	-	-	S	-	-	-	Protein of unknown function (DUF2969)
APMKGJCD_00095	4.52e-282	rodA	-	-	D	ko:K05837	-	ko00000,ko03036	Belongs to the SEDS family
APMKGJCD_00096	2.71e-66	gcsH2	-	-	E	ko:K02437	ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200	ko00000,ko00001,ko00002	glycine cleavage
APMKGJCD_00097	3.22e-185	-	-	-	O	-	-	-	Band 7 protein
APMKGJCD_00098	3.15e-229	-	-	-	S	-	-	-	Protein of unknown function (DUF2785)
APMKGJCD_00099	1.33e-277	ddl	6.3.2.4	-	F	ko:K01921	ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Belongs to the D-alanine--D-alanine ligase family
APMKGJCD_00100	0.0	-	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	Glycerophosphoryl diester phosphodiesterase family
APMKGJCD_00101	5.48e-204	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
APMKGJCD_00102	1.84e-25	uspA	-	-	T	-	-	-	universal stress protein
APMKGJCD_00103	1.1e-45	uspA	-	-	T	-	-	-	universal stress protein
APMKGJCD_00104	3.68e-55	-	-	-	-	-	-	-	-
APMKGJCD_00105	4.23e-306	rarA	-	-	L	ko:K07478	-	ko00000	recombination factor protein RarA
APMKGJCD_00106	1.07e-103	XK27_05190	-	-	S	-	-	-	Protein of unknown function (DUF1694)
APMKGJCD_00107	6.01e-147	yktB	-	-	S	-	-	-	Belongs to the UPF0637 family
APMKGJCD_00108	6.78e-81	-	-	-	KLT	-	-	-	serine threonine protein kinase
APMKGJCD_00109	5.1e-140	rpsD	-	-	J	ko:K02986	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
APMKGJCD_00110	7.76e-108	yebR	1.8.4.14	-	T	ko:K08968	ko00270,map00270	ko00000,ko00001,ko01000	GAF domain-containing protein
APMKGJCD_00111	0.0	ezrA	-	-	D	ko:K06286	-	ko00000,ko03036	modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
APMKGJCD_00112	2.79e-275	iscS2	2.8.1.7	-	E	ko:K04487	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko02048,ko03016,ko03029	Aminotransferase class V
APMKGJCD_00113	1.27e-290	thiI	2.8.1.4	-	H	ko:K03151	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko03016	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
APMKGJCD_00114	5.75e-119	tpx	1.11.1.15	-	O	ko:K11065	-	ko00000,ko01000	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
APMKGJCD_00115	0.0	valS	6.1.1.9	-	J	ko:K01873	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
APMKGJCD_00116	0.0	folC	6.3.2.12, 6.3.2.17	-	H	ko:K11754	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the folylpolyglutamate synthase family
APMKGJCD_00117	9.77e-152	radC	-	-	L	ko:K03630	-	ko00000	DNA repair protein
APMKGJCD_00118	1.71e-218	mreB	-	-	D	ko:K03569	-	ko00000,ko02048,ko03036,ko04812	cell shape determining protein MreB
APMKGJCD_00119	1.53e-184	mreC	-	-	M	ko:K03570	-	ko00000,ko03036	Involved in formation and maintenance of cell shape
APMKGJCD_00120	3.85e-120	mreD	-	-	M	ko:K03571	-	ko00000,ko03036	rod shape-determining protein MreD
APMKGJCD_00121	2.04e-150	minC	-	-	D	ko:K03610	-	ko00000,ko03036,ko04812	Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization
APMKGJCD_00122	1.57e-190	minD	-	-	D	ko:K03609	-	ko00000,ko03036,ko04812	Belongs to the ParA family
APMKGJCD_00123	5.65e-143	-	-	-	P	ko:K02029	-	ko00000,ko00002,ko02000	ABC transporter permease
APMKGJCD_00124	8.68e-121	glnQ	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
APMKGJCD_00125	1.85e-204	aatB	-	-	ET	ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter substrate-binding protein
APMKGJCD_00126	4.37e-302	ymfF	-	-	S	-	-	-	Peptidase M16 inactive domain protein
APMKGJCD_00127	1.19e-314	ymfH	-	-	S	-	-	-	Peptidase M16
APMKGJCD_00128	2.34e-151	ymfM	-	-	S	ko:K15539	-	ko00000	Domain of unknown function (DUF4115)
APMKGJCD_00129	2.25e-131	pgsA	2.7.8.5	-	I	ko:K00995	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
APMKGJCD_00130	6.06e-234	cinA	3.5.1.42	-	S	ko:K03742,ko:K03743	ko00760,map00760	ko00000,ko00001,ko01000	Belongs to the CinA family
APMKGJCD_00131	2.07e-35	cinA	3.5.1.42	-	S	ko:K03742,ko:K03743	ko00760,map00760	ko00000,ko00001,ko01000	Belongs to the CinA family
APMKGJCD_00132	3.34e-249	recA	-	-	L	ko:K03553	ko03440,map03440	ko00000,ko00001,ko00002,ko03400	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
APMKGJCD_00133	8.6e-118	folA	1.5.1.3	-	H	ko:K00287	ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523	ko00000,ko00001,ko00002,ko01000	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
APMKGJCD_00134	1.92e-240	thyA	2.1.1.45	-	F	ko:K00560	ko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523	ko00000,ko00001,ko00002,ko01000	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
APMKGJCD_00135	1.72e-84	yfmR	-	-	S	ko:K15738	-	ko00000,ko02000	ABC transporter, ATP-binding protein
APMKGJCD_00136	0.0	yfmR	-	-	S	ko:K15738	-	ko00000,ko02000	ABC transporter, ATP-binding protein
APMKGJCD_00137	5.3e-88	cca	2.7.7.72	-	J	ko:K00974	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
APMKGJCD_00138	3.64e-172	cca	2.7.7.72	-	J	ko:K00974	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
APMKGJCD_00139	8.9e-219	ypjC	-	-	S	-	-	-	Uncharacterised 5xTM membrane BCR, YitT family COG1284
APMKGJCD_00140	7.2e-274	XK27_05225	-	-	S	-	-	-	Tetratricopeptide repeat protein
APMKGJCD_00141	4.58e-54	hup	-	-	L	ko:K03530	-	ko00000,ko03032,ko03036,ko03400	Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
APMKGJCD_00142	2.78e-164	der	-	-	S	ko:K03977	-	ko00000,ko03009	GTPase that plays an essential role in the late steps of ribosome biogenesis
APMKGJCD_00143	1.1e-125	der	-	-	S	ko:K03977	-	ko00000,ko03009	GTPase that plays an essential role in the late steps of ribosome biogenesis
APMKGJCD_00144	2.29e-278	rpsA	-	-	J	ko:K02945	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein S1
APMKGJCD_00145	9.33e-153	cmk	2.7.4.25	-	F	ko:K00945	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the cytidylate kinase family. Type 1 subfamily
APMKGJCD_00146	4.61e-63	-	-	-	M	-	-	-	Lysin motif
APMKGJCD_00147	0.0	recQ	3.6.4.12	-	L	ko:K03654	ko03018,map03018	ko00000,ko00001,ko01000,ko03400	ATP-dependent DNA helicase RecQ
APMKGJCD_00148	9.21e-244	-	-	-	S	-	-	-	Helix-turn-helix domain
APMKGJCD_00149	1.11e-121	ribU	-	-	U	-	-	-	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
APMKGJCD_00150	2.58e-166	rluB	5.4.99.22	-	J	ko:K06178	-	ko00000,ko01000,ko03009	Belongs to the pseudouridine synthase RsuA family
APMKGJCD_00151	1.7e-133	scpB	-	-	D	ko:K06024	-	ko00000,ko03036	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
APMKGJCD_00152	1.54e-170	scpA	-	-	D	ko:K05896	-	ko00000,ko03036	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
APMKGJCD_00153	7.96e-94	ribT	-	-	K	ko:K02859	-	ko00000	COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
APMKGJCD_00154	2.17e-212	xerD	-	-	D	ko:K04763	-	ko00000,ko03036	recombinase XerD
APMKGJCD_00155	3.1e-214	yitL	-	-	S	ko:K00243	-	ko00000	S1 domain
APMKGJCD_00156	0.0	pyk	2.7.1.40	-	G	ko:K00873	ko00010,ko00230,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko04930,ko05165,ko05203,ko05230,map00010,map00230,map00620,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map04930,map05165,map05203,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Belongs to the pyruvate kinase family
APMKGJCD_00157	1.31e-160	tal2	2.2.1.2	-	H	ko:K00616	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Transaldolase/Fructose-6-phosphate aldolase
APMKGJCD_00158	0.0	dnaE	2.7.7.7	-	L	ko:K02337	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase
APMKGJCD_00159	2.08e-234	dnaE	2.7.7.7	-	L	ko:K02337	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase
APMKGJCD_00160	0.0	clpB	-	-	O	ko:K03695	ko04213,map04213	ko00000,ko00001,ko03110	Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
APMKGJCD_00161	3.57e-301	pepT	3.4.11.4	-	E	ko:K01258	-	ko00000,ko01000,ko01002	Cleaves the N-terminal amino acid of tripeptides
APMKGJCD_00162	3.19e-199	yqfO	-	-	S	-	-	-	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
APMKGJCD_00163	3.96e-163	trmK	2.1.1.217	-	S	ko:K06967	-	ko00000,ko01000,ko03016	SAM-dependent methyltransferase
APMKGJCD_00164	0.0	ydgH	-	-	S	ko:K06994	-	ko00000	MMPL family
APMKGJCD_00165	5.52e-112	-	-	-	K	-	-	-	Transcriptional regulator
APMKGJCD_00166	9.66e-252	sigA	-	-	K	ko:K03086	-	ko00000,ko03021	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
APMKGJCD_00167	0.0	dnaG	-	-	L	ko:K02316	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
APMKGJCD_00168	0.0	glyS	6.1.1.14	-	J	ko:K01879	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Glycyl-tRNA synthetase beta subunit
APMKGJCD_00169	7.13e-227	glyQ	6.1.1.14	-	J	ko:K01878	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	glycyl-tRNA synthetase alpha subunit
APMKGJCD_00170	7.51e-194	recO	-	-	L	ko:K03584	ko03440,map03440	ko00000,ko00001,ko03400	Involved in DNA repair and RecF pathway recombination
APMKGJCD_00171	1.27e-217	era	-	-	S	ko:K03595	-	ko00000,ko03009,ko03029	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
APMKGJCD_00172	1.93e-81	dgkA	2.7.1.107, 2.7.1.66	-	M	ko:K00887,ko:K00901	ko00550,ko00561,ko00564,ko01100,ko01110,ko04070,ko04072,ko05231,map00550,map00561,map00564,map01100,map01110,map04070,map04072,map05231	ko00000,ko00001,ko01000	Diacylglycerol kinase
APMKGJCD_00173	1.22e-112	ybeY	-	-	S	ko:K07042	-	ko00000,ko03009	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
APMKGJCD_00174	2.06e-232	phoH	-	-	T	ko:K06217	-	ko00000	phosphate starvation-inducible protein PhoH
APMKGJCD_00175	1.72e-94	yqeY	-	-	S	ko:K09117	-	ko00000	YqeY-like protein
APMKGJCD_00176	1.45e-89	ydeP	-	-	K	-	-	-	Transcriptional regulator, HxlR family
APMKGJCD_00177	2.2e-250	qor	1.1.1.1, 1.6.5.5	-	C	ko:K00001,ko:K00344	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily
APMKGJCD_00178	2.21e-30	rpsU	-	-	J	ko:K02970	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bS21 family
APMKGJCD_00179	1.69e-193	yqfL	2.7.11.33, 2.7.4.28	-	F	ko:K09773	-	ko00000,ko01000	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
APMKGJCD_00180	5.18e-221	nfo	3.1.21.2	-	L	ko:K01151	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
APMKGJCD_00181	1.46e-306	-	2.7.8.12	-	M	ko:K09809	-	ko00000,ko01000	glycerophosphotransferase
APMKGJCD_00182	1.84e-194	tagG	-	-	U	ko:K09692	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Transport permease protein
APMKGJCD_00183	5.77e-261	tagB	2.7.8.44	-	M	ko:K21285	-	ko00000,ko01000	CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
APMKGJCD_00184	1.65e-208	yitT	-	-	S	-	-	-	Uncharacterised 5xTM membrane BCR, YitT family COG1284
APMKGJCD_00185	8.23e-45	msrA	1.8.4.11, 1.8.4.12	-	O	ko:K07304,ko:K12267	-	ko00000,ko01000	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
APMKGJCD_00186	6.26e-69	msrA	1.8.4.11, 1.8.4.12	-	O	ko:K07304,ko:K12267	-	ko00000,ko01000	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
APMKGJCD_00187	0.0	ytgP	-	-	S	ko:K03328	-	ko00000	Polysaccharide biosynthesis protein
APMKGJCD_00188	2.2e-79	-	-	-	K	-	-	-	Helix-turn-helix domain
APMKGJCD_00189	0.0	-	3.4.19.1	-	E	ko:K01303	-	ko00000,ko01000,ko01002	Prolyl oligopeptidase family
APMKGJCD_00190	1.42e-218	panE	1.1.1.169	-	H	ko:K00077	ko00770,ko01100,ko01110,map00770,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
APMKGJCD_00191	7.46e-59	-	-	-	-	-	-	-	-
APMKGJCD_00192	3.64e-86	spxA	-	-	K	ko:K16509	-	ko00000	Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
APMKGJCD_00193	0.0	nhaP2	-	-	P	ko:K03316	-	ko00000	Sodium proton antiporter
APMKGJCD_00194	0.0	yfkN	3.1.3.6, 3.1.4.16	-	F	ko:K01119	ko00230,ko00240,map00230,map00240	ko00000,ko00001,ko01000	Belongs to the 5'-nucleotidase family
APMKGJCD_00195	0.0	astA	2.8.2.22	-	M	ko:K01023	-	ko00000,ko01000	Arylsulfotransferase Ig-like domain
APMKGJCD_00196	3.8e-152	-	-	-	S	-	-	-	Protein of unknown function (DUF1275)
APMKGJCD_00197	2.49e-200	rihA	-	-	F	ko:K01250	-	ko00000,ko01000	Inosine-uridine preferring nucleoside hydrolase
APMKGJCD_00199	1.71e-239	nupC	-	-	F	ko:K11535	-	ko00000,ko02000	Na+ dependent nucleoside transporter C-terminus
APMKGJCD_00200	1.78e-188	-	1.1.1.1	-	C	ko:K00001	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	alcohol dehydrogenase
APMKGJCD_00201	1.93e-95	-	-	-	S	-	-	-	Membrane
APMKGJCD_00202	1.25e-143	trpF	5.3.1.24	-	E	ko:K01817	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the TrpF family
APMKGJCD_00203	3.33e-155	psuK	2.7.1.83	-	G	ko:K16328	ko00240,map00240	ko00000,ko00001,ko01000	Phosphomethylpyrimidine kinase
APMKGJCD_00204	1.08e-139	psuK	2.7.1.83	-	GK	ko:K16328	ko00240,map00240	ko00000,ko00001,ko01000	Winged helix-turn-helix DNA-binding
APMKGJCD_00206	7.41e-229	-	-	-	K	ko:K02529,ko:K03435	-	ko00000,ko03000	helix_turn _helix lactose operon repressor
APMKGJCD_00207	1.48e-69	-	-	-	S	-	-	-	Pentapeptide repeats (8 copies)
APMKGJCD_00208	3.12e-129	ywlG	-	-	S	-	-	-	Belongs to the UPF0340 family
APMKGJCD_00209	5.54e-111	hmpT	-	-	S	-	-	-	ECF-type riboflavin transporter, S component
APMKGJCD_00210	6.56e-181	thiD	2.7.1.35	-	H	ko:K00868	ko00750,ko01100,map00750,map01100	ko00000,ko00001,ko01000	Phosphomethylpyrimidine kinase
APMKGJCD_00211	0.0	norG_2	-	-	K	-	-	-	Aminotransferase class I and II
APMKGJCD_00212	1.03e-284	ywtF_2	-	-	K	-	-	-	Cell envelope-related transcriptional attenuator domain
APMKGJCD_00213	6.08e-179	-	-	-	P	ko:K02049	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
APMKGJCD_00214	4.71e-189	-	-	-	P	ko:K02050	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
APMKGJCD_00215	6.03e-204	-	-	-	P	ko:K02050	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
APMKGJCD_00216	3.11e-290	rodA	-	-	D	ko:K05837	-	ko00000,ko03036	Cell cycle protein
APMKGJCD_00217	7.67e-124	-	-	-	-	-	-	-	-
APMKGJCD_00219	4.28e-93	-	4.4.1.5	-	E	ko:K01759	ko00620,map00620	ko00000,ko00001,ko01000	Glyoxalase
APMKGJCD_00220	6.12e-184	-	-	-	S	-	-	-	Membrane
APMKGJCD_00221	8.46e-239	tdh	1.1.1.14	-	C	ko:K00008	ko00040,ko00051,ko01100,map00040,map00051,map01100	ko00000,ko00001,ko00002,ko01000	Zinc-binding dehydrogenase
APMKGJCD_00222	1.81e-221	scrK	2.7.1.4	-	GK	ko:K00847	ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100	ko00000,ko00001,ko01000	ROK family
APMKGJCD_00223	3.55e-99	-	-	-	-	-	-	-	-
APMKGJCD_00224	2.71e-260	gldA	1.1.1.6	-	C	ko:K00005	ko00561,ko00640,ko01100,map00561,map00640,map01100	ko00000,ko00001,ko01000	dehydrogenase
APMKGJCD_00225	6.92e-73	ykkC	-	-	P	ko:K18924	-	ko00000,ko00002,ko02000	Small Multidrug Resistance protein
APMKGJCD_00226	6.51e-69	ykkD	-	-	P	ko:K18925	-	ko00000,ko00002,ko02000	Multidrug resistance protein
APMKGJCD_00227	8.42e-138	yokL3	-	-	J	-	-	-	Acetyltransferase (GNAT) domain
APMKGJCD_00228	8.63e-188	-	-	-	G	-	-	-	Belongs to the phosphoglycerate mutase family
APMKGJCD_00230	0.0	treP	2.4.1.64	GH65	G	ko:K05342	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	hydrolase, family 65, central catalytic
APMKGJCD_00231	7.09e-251	-	-	-	I	-	-	-	alpha/beta hydrolase fold
APMKGJCD_00232	0.0	xylP2	-	-	G	-	-	-	symporter
APMKGJCD_00233	8.2e-145	azo1	1.5.1.36, 1.7.1.6	-	S	ko:K03206,ko:K19784,ko:K22393	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	NADPH-dependent FMN reductase
APMKGJCD_00234	0.0	-	-	-	M	-	-	-	MucBP domain
APMKGJCD_00235	2.11e-93	-	-	-	-	-	-	-	-
APMKGJCD_00236	1.72e-36	-	-	-	K	ko:K07729	-	ko00000,ko03000	Transcriptional
APMKGJCD_00237	3.88e-285	-	-	-	LO	ko:K09384	-	ko00000	Uncharacterized conserved protein (DUF2075)
APMKGJCD_00238	1.11e-153	cah	4.2.1.1	-	P	ko:K01674	ko00910,map00910	ko00000,ko00001,ko01000	Eukaryotic-type carbonic anhydrase
APMKGJCD_00239	4.83e-31	-	-	-	-	-	-	-	-
APMKGJCD_00240	2.4e-102	-	-	-	-	-	-	-	-
APMKGJCD_00241	8.32e-147	lacA	2.3.1.18, 2.3.1.79	-	S	ko:K00633,ko:K00661	-	ko00000,ko01000	Maltose acetyltransferase
APMKGJCD_00242	7.83e-264	pmrB	-	-	EGP	-	-	-	Major Facilitator Superfamily
APMKGJCD_00243	2.89e-175	-	1.1.1.53	-	IQ	ko:K00038	ko00140,ko01100,map00140,map01100	ko00000,ko00001,ko01000	reductase
APMKGJCD_00244	1.06e-297	-	-	-	EK	-	-	-	Aminotransferase, class I
APMKGJCD_00245	0.0	fusA1	-	-	J	-	-	-	elongation factor G
APMKGJCD_00246	5.92e-164	-	-	-	F	-	-	-	glutamine amidotransferase
APMKGJCD_00247	1.79e-200	yhaZ	-	-	L	-	-	-	DNA alkylation repair enzyme
APMKGJCD_00248	1.61e-155	-	-	-	K	-	-	-	UTRA
APMKGJCD_00249	4.34e-237	-	-	-	O	-	-	-	ADP-ribosylglycohydrolase
APMKGJCD_00250	0.0	-	-	-	F	ko:K03457	-	ko00000	Belongs to the purine-cytosine permease (2.A.39) family
APMKGJCD_00251	6.96e-206	-	-	-	G	-	-	-	Belongs to the carbohydrate kinase PfkB family
APMKGJCD_00252	3.78e-218	pepI	3.4.11.5	-	E	ko:K01259	ko00330,map00330	ko00000,ko00001,ko01000,ko01002	Releases the N-terminal proline from various substrates
APMKGJCD_00253	4e-174	-	-	-	S	-	-	-	Protein of unknown function
APMKGJCD_00254	1.1e-276	-	-	-	EGP	ko:K08196	-	ko00000,ko02000	Major Facilitator
APMKGJCD_00255	2.26e-155	pyrF	4.1.1.23	-	F	ko:K01591	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
APMKGJCD_00256	1.03e-144	pyrE	2.4.2.10	-	F	ko:K00762	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
APMKGJCD_00257	4.49e-179	XK27_08125	-	-	S	ko:K09861	-	ko00000	Belongs to the UPF0246 family
APMKGJCD_00258	0.0	-	3.2.1.45	GH30	G	ko:K01201	ko00511,ko00600,ko01100,ko04142,map00511,map00600,map01100,map04142	ko00000,ko00001,ko01000	Glycosyl hydrolase family 30 TIM-barrel domain
APMKGJCD_00259	1.51e-202	-	-	-	K	-	-	-	Transcriptional regulator
APMKGJCD_00260	4.68e-09	-	-	-	S	-	-	-	Protein of unknown function (DUF2992)
APMKGJCD_00261	7.18e-43	-	-	-	S	-	-	-	Transglycosylase associated protein
APMKGJCD_00262	2.5e-52	-	-	-	-	-	-	-	-
APMKGJCD_00263	0.0	abfA	3.2.1.55	GH51	G	ko:K01209	ko00520,map00520	ko00000,ko00001,ko01000	Alpha-L-arabinofuranosidase C-terminus
APMKGJCD_00264	5.88e-200	-	-	-	EG	-	-	-	EamA-like transporter family
APMKGJCD_00265	2.63e-36	-	-	-	-	-	-	-	-
APMKGJCD_00266	2.17e-267	atoB	1.1.1.88, 2.3.1.9	-	I	ko:K00054,ko:K00626	ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the thiolase family
APMKGJCD_00267	6.26e-61	-	-	-	K	ko:K02529	-	ko00000,ko03000	helix_turn _helix lactose operon repressor
APMKGJCD_00268	5.22e-117	speA	4.1.1.17, 4.1.1.18, 4.1.1.19	-	E	ko:K01581,ko:K01582,ko:K01585	ko00310,ko00330,ko00480,ko00960,ko01100,ko01110,ko01130,map00310,map00330,map00480,map00960,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Orn/Lys/Arg decarboxylase, C-terminal domain
APMKGJCD_00269	0.0	speA	4.1.1.17, 4.1.1.18, 4.1.1.19	-	E	ko:K01581,ko:K01582,ko:K01585	ko00310,ko00330,ko00480,ko00960,ko01100,ko01110,ko01130,map00310,map00330,map00480,map00960,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Orn/Lys/Arg decarboxylase, C-terminal domain
APMKGJCD_00270	5.91e-243	potE	-	-	U	ko:K03756,ko:K03758	-	ko00000,ko02000	Amino acid permease
APMKGJCD_00272	1.16e-280	rny	-	-	S	ko:K18682	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	Endoribonuclease that initiates mRNA decay
APMKGJCD_00273	9.84e-192	ymdB	-	-	S	ko:K02029,ko:K02030,ko:K09769	-	ko00000,ko00002,ko02000	YmdB-like protein
APMKGJCD_00274	0.0	mutS	-	-	L	ko:K03555	ko03430,map03430	ko00000,ko00001,ko03400	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
APMKGJCD_00275	0.0	mutL	-	-	L	ko:K03572	ko03430,map03430	ko00000,ko00001,ko03400	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
APMKGJCD_00276	1.58e-139	ruvA	3.6.4.12	-	L	ko:K03550	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
APMKGJCD_00277	4.74e-243	ruvB	3.6.4.12	-	L	ko:K03551	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
APMKGJCD_00278	1.38e-254	queA	2.4.99.17	-	J	ko:K07568	-	ko00000,ko01000,ko03016	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
APMKGJCD_00279	6.46e-290	tgt	2.4.2.29	-	F	ko:K00773	-	ko00000,ko01000,ko03016	Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
APMKGJCD_00280	9.44e-52	yajC	-	-	U	ko:K03210	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Preprotein translocase
APMKGJCD_00281	1.11e-230	dinB	2.7.7.7	-	L	ko:K02346	-	ko00000,ko01000,ko03400	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
APMKGJCD_00282	3.17e-231	nrnA	3.1.13.3, 3.1.3.7	-	S	ko:K06881	ko00920,ko01100,ko01120,map00920,map01100,map01120	ko00000,ko00001,ko01000,ko03400	DHHA1 domain protein
APMKGJCD_00283	0.0	cshB	3.6.4.13	-	JKL	ko:K05592,ko:K18692	ko03018,map03018	ko00000,ko00001,ko01000,ko03009,ko03019	DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
APMKGJCD_00284	0.0	alaS	6.1.1.7	-	J	ko:K01872	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
APMKGJCD_00285	1.94e-59	yrzL	-	-	S	-	-	-	Belongs to the UPF0297 family
APMKGJCD_00286	1.43e-96	yrrK	-	-	J	ko:K07447	-	ko00000,ko01000	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
APMKGJCD_00287	2.47e-68	yrzB	-	-	S	-	-	-	Belongs to the UPF0473 family
APMKGJCD_00288	1.62e-53	-	-	-	D	ko:K09888	-	ko00000,ko03036	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
APMKGJCD_00289	3.66e-115	cvpA	-	-	S	-	-	-	Colicin V production protein
APMKGJCD_00290	0.0	mutS2	-	-	L	ko:K07456	ko03430,map03430	ko00000,ko00001,ko03400	Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
APMKGJCD_00291	6.22e-72	trxA	-	-	O	ko:K03671	ko04621,ko05418,map04621,map05418	ko00000,ko00001,ko03110	Belongs to the thioredoxin family
APMKGJCD_00292	3.43e-118	yslB	-	-	S	-	-	-	Protein of unknown function (DUF2507)
APMKGJCD_00293	1.13e-187	murI	3.6.1.66, 5.1.1.3	-	M	ko:K01776,ko:K02428	ko00230,ko00471,ko01100,map00230,map00471,map01100	ko00000,ko00001,ko01000,ko01011	Provides the (R)-glutamate required for cell wall biosynthesis
APMKGJCD_00294	2.53e-139	rdgB	3.6.1.66	-	F	ko:K02428	ko00230,map00230	ko00000,ko00001,ko01000	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
APMKGJCD_00295	3.07e-129	ysnB	-	-	S	ko:K07095	-	ko00000	Phosphoesterase
APMKGJCD_00296	1.67e-110	ykuL	-	-	S	-	-	-	(CBS) domain
APMKGJCD_00298	1.12e-64	-	-	-	K	-	-	-	helix_turn_helix, Arsenical Resistance Operon Repressor
APMKGJCD_00299	2.7e-199	ykuT	-	-	M	ko:K16052,ko:K22044	-	ko00000,ko02000	mechanosensitive ion channel
APMKGJCD_00300	3.9e-82	ytxG	-	-	S	-	-	-	protein containing a divergent version of the methyl-accepting chemotaxis-like domain
APMKGJCD_00301	1.38e-73	-	-	-	-	-	-	-	-
APMKGJCD_00302	2.45e-270	pepQ	3.4.13.9	-	E	ko:K01271	-	ko00000,ko01000,ko01002	Creatinase/Prolidase N-terminal domain
APMKGJCD_00303	1.08e-173	-	-	-	I	-	-	-	alpha/beta hydrolase fold
APMKGJCD_00304	5.08e-221	draG	-	-	O	-	-	-	ADP-ribosylglycohydrolase
APMKGJCD_00305	6.17e-133	-	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	Maltose acetyltransferase
APMKGJCD_00307	2.45e-128	cadD	-	-	P	-	-	-	Cadmium resistance transporter
APMKGJCD_00308	3.26e-101	-	-	-	K	ko:K03827	-	ko00000,ko01000	Acetyltransferase (GNAT) domain
APMKGJCD_00309	1.19e-107	-	-	-	S	-	-	-	GtrA-like protein
APMKGJCD_00310	0.0	oppA	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding proteins, family 5 Middle
APMKGJCD_00311	1.57e-148	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
APMKGJCD_00312	1.75e-293	-	-	-	S	ko:K01421	-	ko00000	ABC-2 family transporter protein
APMKGJCD_00313	2.45e-185	hflC	-	-	O	ko:K04087	-	ko00000,ko00002,ko01000	prohibitin homologues
APMKGJCD_00314	5.88e-72	-	-	-	S	-	-	-	protein encoded in hypervariable junctions of pilus gene clusters
APMKGJCD_00315	2.7e-175	-	-	-	-	-	-	-	-
APMKGJCD_00316	1.05e-130	-	-	-	S	ko:K09962	-	ko00000	Nucleotidyltransferase
APMKGJCD_00317	1.71e-110	-	-	-	S	-	-	-	Protein of unknown function (DUF2798)
APMKGJCD_00318	2.19e-75	yuxO	-	-	Q	-	-	-	Thioesterase superfamily
APMKGJCD_00319	2.33e-199	menB	4.1.3.36	-	H	ko:K01661	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
APMKGJCD_00320	0.0	menE	6.2.1.26	-	H	ko:K01911	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Belongs to the ATP-dependent AMP-binding enzyme family. MenE subfamily
APMKGJCD_00321	1.44e-122	-	-	-	S	-	-	-	Protein of unknown function (DUF1097)
APMKGJCD_00322	1.93e-214	-	-	-	-	-	-	-	-
APMKGJCD_00323	0.0	murE	6.3.2.13, 6.3.2.7	-	M	ko:K01928,ko:K05362	ko00300,ko00550,ko01100,map00300,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
APMKGJCD_00324	0.0	lysS	6.1.1.6	-	J	ko:K04567	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-II aminoacyl-tRNA synthetase family
APMKGJCD_00325	5.6e-272	-	-	-	E	-	-	-	Major Facilitator Superfamily
APMKGJCD_00328	2.68e-129	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
APMKGJCD_00329	1.02e-231	-	-	-	C	-	-	-	nadph quinone reductase
APMKGJCD_00330	5.55e-137	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
APMKGJCD_00331	0.0	-	-	-	E	ko:K20265	ko02024,map02024	ko00000,ko00001,ko02000	amino acid
APMKGJCD_00332	0.0	-	4.1.1.15, 4.1.2.27	-	E	ko:K01580,ko:K01634	ko00250,ko00410,ko00430,ko00600,ko00650,ko01100,ko01110,ko01120,ko02024,ko04071,ko04727,ko04940,map00250,map00410,map00430,map00600,map00650,map01100,map01110,map01120,map02024,map04071,map04727,map04940	ko00000,ko00001,ko00002,ko01000	Belongs to the group II decarboxylase family
APMKGJCD_00333	0.0	gltX	6.1.1.24	-	J	ko:K09698	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
APMKGJCD_00335	7.51e-33	-	-	-	-	-	-	-	-
APMKGJCD_00336	2.85e-176	-	-	-	-	-	-	-	-
APMKGJCD_00337	6.4e-11	-	-	-	T	-	-	-	diguanylate cyclase
APMKGJCD_00338	2.15e-57	ccpA	-	-	K	ko:K02529	-	ko00000,ko03000	catabolite control protein A
APMKGJCD_00339	3.32e-160	ccpA	-	-	K	ko:K02529	-	ko00000,ko03000	catabolite control protein A
APMKGJCD_00340	4.11e-169	-	-	-	-	-	-	-	-
APMKGJCD_00341	5.41e-171	glnQ	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
APMKGJCD_00342	0.0	glnPH2	-	-	P	ko:K02029,ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter permease
APMKGJCD_00343	1.68e-169	yebC	-	-	K	-	-	-	Transcriptional regulatory protein
APMKGJCD_00344	6.51e-221	comGA	-	-	NU	ko:K02243	-	ko00000,ko00002,ko02044	Type II IV secretion system protein
APMKGJCD_00345	1.51e-217	comGB	-	-	NU	ko:K02244	-	ko00000,ko00002,ko02044	type II secretion system
APMKGJCD_00346	1.61e-64	comGC	-	-	U	ko:K02245	-	ko00000,ko00002,ko02044	competence protein ComGC
APMKGJCD_00347	3.21e-104	-	-	-	-	-	-	-	-
APMKGJCD_00349	8.38e-98	-	-	-	-	ko:K02248	-	ko00000,ko00002,ko02044	-
APMKGJCD_00350	4.88e-237	ytxK	2.1.1.72	-	L	ko:K00571	-	ko00000,ko01000,ko02048	N-6 DNA Methylase
APMKGJCD_00351	2.16e-282	ackA	2.7.2.1	-	F	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
APMKGJCD_00352	0.0	cycA	-	-	E	ko:K03293,ko:K11737	-	ko00000,ko02000	Amino acid permease
APMKGJCD_00353	3.16e-197	yeaE	-	-	S	-	-	-	Aldo keto
APMKGJCD_00354	6.48e-148	-	-	-	S	-	-	-	Calcineurin-like phosphoesterase
APMKGJCD_00355	0.0	yunD	3.1.3.5	-	F	ko:K01081	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the 5'-nucleotidase family
APMKGJCD_00356	2.6e-141	yutD	-	-	S	-	-	-	Protein of unknown function (DUF1027)
APMKGJCD_00357	6.64e-190	nagD	3.1.3.41	-	G	ko:K01101	ko00627,ko01120,map00627,map01120	ko00000,ko00001,ko01000	Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
APMKGJCD_00358	4.37e-154	-	-	-	S	-	-	-	Protein of unknown function (DUF1461)
APMKGJCD_00359	3.37e-119	-	-	-	S	-	-	-	WxL domain surface cell wall-binding
APMKGJCD_00360	0.0	-	-	-	S	-	-	-	Leucine-rich repeat (LRR) protein
APMKGJCD_00361	9.23e-177	-	-	-	M	-	-	-	domain protein
APMKGJCD_00362	4.46e-121	-	-	-	M	-	-	-	domain protein
APMKGJCD_00363	0.0	-	-	-	E	ko:K03294	-	ko00000	Amino Acid
APMKGJCD_00364	1.75e-185	dhrS4	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Oxidoreductase, short chain dehydrogenase reductase family protein
APMKGJCD_00365	1.19e-157	dedA	-	-	S	ko:K03975	-	ko00000	SNARE-like domain protein
APMKGJCD_00366	2.63e-115	pgpA	3.1.3.27	-	I	ko:K01095	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Phosphatidylglycerophosphatase A
APMKGJCD_00367	9.6e-143	ppiB	5.2.1.8	-	G	ko:K03768	-	ko00000,ko01000,ko03110	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
APMKGJCD_00368	4.82e-94	yugI	-	-	J	ko:K07570,ko:K07571	-	ko00000	general stress protein
APMKGJCD_00369	0.0	murC	6.3.2.8	-	M	ko:K01924	ko00471,ko00550,ko01100,map00471,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Belongs to the MurCDEF family
APMKGJCD_00370	0.0	sftA	-	-	D	ko:K03466	-	ko00000,ko03036	Belongs to the FtsK SpoIIIE SftA family
APMKGJCD_00371	2.41e-62	ytpR	-	-	J	ko:K06878	-	ko00000	Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
APMKGJCD_00372	4.44e-65	ytpR	-	-	J	ko:K06878	-	ko00000	Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
APMKGJCD_00373	2.29e-74	ytpP	-	-	CO	-	-	-	Thioredoxin
APMKGJCD_00374	3.29e-73	-	-	-	S	-	-	-	Small secreted protein
APMKGJCD_00375	2.3e-310	cycA	-	-	E	ko:K03293,ko:K11737	-	ko00000,ko02000	Amino acid permease
APMKGJCD_00376	3.86e-260	ald	1.4.1.1	-	C	ko:K00259	ko00250,ko00430,ko01100,map00250,map00430,map01100	ko00000,ko00001,ko01000	Belongs to the AlaDH PNT family
APMKGJCD_00377	1.85e-110	-	-	-	T	-	-	-	Belongs to the universal stress protein A family
APMKGJCD_00378	0.0	pepV	3.5.1.18	-	E	ko:K01270,ko:K01274,ko:K01439	ko00300,ko00480,ko01100,ko01120,ko01230,map00300,map00480,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000,ko01002	dipeptidase PepV
APMKGJCD_00379	1.89e-191	nnrD	4.2.1.136, 5.1.99.6	-	H	ko:K17758,ko:K17759	-	ko00000,ko01000	Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
APMKGJCD_00380	1.69e-161	-	5.4.99.19	-	J	ko:K06183	-	ko00000,ko01000,ko03009	pseudouridine synthase activity
APMKGJCD_00381	2.34e-279	ytgP	-	-	S	ko:K03328	-	ko00000	Polysaccharide biosynthesis protein
APMKGJCD_00382	1.98e-71	ytgP	-	-	S	ko:K03328	-	ko00000	Polysaccharide biosynthesis protein
APMKGJCD_00383	2.16e-68	-	-	-	-	-	-	-	-
APMKGJCD_00384	8.42e-188	-	-	-	S	-	-	-	NADPH-dependent FMN reductase
APMKGJCD_00385	4.14e-155	-	-	-	P	ko:K01990	-	ko00000,ko00002,ko02000	ABC-type multidrug transport system ATPase component
APMKGJCD_00386	0.0	leuS	6.1.1.4	-	J	ko:K01869	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Belongs to the class-I aminoacyl-tRNA synthetase family
APMKGJCD_00387	3.3e-151	yodM	3.6.1.27	-	I	ko:K19302	ko00550,map00550	ko00000,ko00001,ko01000,ko01011	Acid phosphatase homologues
APMKGJCD_00388	9.68e-134	ytqB	-	-	J	-	-	-	Putative rRNA methylase
APMKGJCD_00390	0.0	yijG	-	GT2	M	ko:K11936	ko02026,map02026	ko00000,ko00001,ko01000,ko01003,ko02000	Glycosyl transferase
APMKGJCD_00391	1.58e-116	-	-	-	-	-	-	-	-
APMKGJCD_00392	4.44e-131	-	-	-	T	-	-	-	EAL domain
APMKGJCD_00393	7.66e-166	mecA	-	-	NOT	ko:K16511	-	ko00000	Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
APMKGJCD_00394	3.6e-92	spxA	-	-	K	ko:K16509	-	ko00000	Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
APMKGJCD_00395	5.25e-178	yhfI	-	-	S	-	-	-	Metallo-beta-lactamase superfamily
APMKGJCD_00396	3.62e-121	traP	1.14.99.57	-	S	ko:K21481	-	ko00000,ko01000	enzyme involved in biosynthesis of extracellular polysaccharides
APMKGJCD_00397	4.82e-297	-	-	-	N	ko:K09384	-	ko00000	Uncharacterized conserved protein (DUF2075)
APMKGJCD_00416	4.96e-119	aguA2	3.5.3.12	-	E	ko:K10536	ko00330,ko01100,map00330,map01100	ko00000,ko00001,ko01000	agmatine deiminase
APMKGJCD_00417	2.92e-191	-	-	-	K	ko:K03481	-	ko00000,ko03000	Helix-turn-helix domain, rpiR family
APMKGJCD_00418	3.19e-208	mleR	-	-	K	-	-	-	LysR family
APMKGJCD_00419	0.0	mleS	1.1.1.38, 4.1.1.101	-	C	ko:K00027,ko:K22212	ko00620,ko01120,ko01200,ko02020,map00620,map01120,map01200,map02020	ko00000,ko00001,ko01000	Malic enzyme
APMKGJCD_00420	4.7e-215	mleP2	-	-	S	ko:K07088	-	ko00000	Sodium Bile acid symporter family
APMKGJCD_00421	1.93e-108	thiW	-	-	S	-	-	-	Thiamine-precursor transporter protein (ThiW)
APMKGJCD_00422	4.98e-272	-	-	-	EGP	-	-	-	Major Facilitator Superfamily
APMKGJCD_00423	6.9e-113	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
APMKGJCD_00424	7.99e-233	yxeA	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter permease
APMKGJCD_00425	1.89e-157	lolD	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
APMKGJCD_00426	2.68e-287	-	-	-	U	-	-	-	Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family
APMKGJCD_00427	6.9e-129	-	-	-	S	ko:K06910	-	ko00000	Phosphatidylethanolamine-binding protein
APMKGJCD_00428	2.79e-89	-	-	-	S	-	-	-	Protein of unknown function (DUF1398)
APMKGJCD_00429	1.35e-153	-	-	-	S	ko:K15770	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	GyrI-like small molecule binding domain
APMKGJCD_00430	2.08e-159	-	3.8.1.2	-	S	ko:K01560	ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120	ko00000,ko00001,ko01000	Haloacid dehalogenase-like hydrolase
APMKGJCD_00431	1.64e-283	dhaT	1.1.1.202	-	C	ko:K00086	ko00561,ko00640,map00561,map00640	ko00000,ko00001,ko01000	Dehydrogenase
APMKGJCD_00432	2.54e-220	yeaB	-	-	P	-	-	-	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
APMKGJCD_00433	6.64e-162	-	-	-	K	ko:K16326	-	ko00000,ko03000	Cyclic nucleotide-monophosphate binding domain
APMKGJCD_00434	6.88e-229	-	3.2.2.1, 3.2.2.8	-	F	ko:K01239,ko:K10213	ko00230,ko00240,ko00760,ko01100,map00230,map00240,map00760,map01100	ko00000,ko00001,ko01000	Nucleoside
APMKGJCD_00435	3.34e-270	mccF	-	-	V	-	-	-	LD-carboxypeptidase
APMKGJCD_00436	5.89e-90	-	-	-	K	-	-	-	Transcriptional regulator, HxlR family
APMKGJCD_00438	2.01e-287	-	-	-	C	-	-	-	Oxidoreductase
APMKGJCD_00439	3.42e-97	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
APMKGJCD_00440	9.95e-81	-	-	-	-	-	-	-	-
APMKGJCD_00441	2.87e-54	-	-	-	-	-	-	-	-
APMKGJCD_00442	3.25e-291	gltT	-	-	U	ko:K03309,ko:K11102	-	ko00000,ko02000	Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
APMKGJCD_00443	5.01e-138	ahpC	1.11.1.15	-	O	ko:K03386	ko04214,map04214	ko00000,ko00001,ko01000,ko04147	Peroxiredoxin
APMKGJCD_00444	1.84e-80	-	-	-	-	-	-	-	-
APMKGJCD_00445	5.26e-148	-	-	-	GM	-	-	-	NAD(P)H-binding
APMKGJCD_00446	3.28e-61	-	-	-	-	-	-	-	-
APMKGJCD_00448	5.81e-63	-	-	-	K	-	-	-	Helix-turn-helix domain
APMKGJCD_00451	0.0	gnd	1.1.1.343, 1.1.1.44	-	H	ko:K00033	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
APMKGJCD_00452	4.64e-96	-	-	-	K	-	-	-	Transcriptional regulator
APMKGJCD_00453	3.49e-102	-	-	-	S	ko:K02348	-	ko00000	Gnat family
APMKGJCD_00454	0.0	zwf	1.1.1.363, 1.1.1.49	-	G	ko:K00036	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,ko05230,map00030,map00480,map01100,map01110,map01120,map01130,map01200,map05230	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
APMKGJCD_00455	4.05e-205	-	2.3.1.81	-	V	ko:K00662	-	ko00000,ko01000,ko01504	Aminoglycoside 3-N-acetyltransferase
APMKGJCD_00456	7.54e-204	-	1.1.1.65	-	C	ko:K05275	ko00750,ko01100,ko01120,map00750,map01100,map01120	ko00000,ko00001,ko01000	Aldo keto reductase
APMKGJCD_00457	3.88e-149	-	-	-	-	-	-	-	-
APMKGJCD_00458	6.56e-273	yttB	-	-	EGP	-	-	-	Major Facilitator
APMKGJCD_00459	1.44e-311	glpT	-	-	G	ko:K02445	-	ko00000,ko02000	Major Facilitator Superfamily
APMKGJCD_00460	1.38e-174	nfrA	1.5.1.38	-	C	ko:K19285	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	nitroreductase
APMKGJCD_00461	1.39e-111	nrdI	-	-	F	ko:K03647	-	ko00000	Belongs to the NrdI family
APMKGJCD_00462	0.0	-	-	-	S	ko:K18231,ko:K19349	ko02010,map02010	br01600,ko00000,ko00001,ko01504,ko02000	ATPases associated with a variety of cellular activities
APMKGJCD_00463	0.0	lmrB	-	-	U	ko:K18926	-	ko00000,ko00002,ko02000	Belongs to the major facilitator superfamily
APMKGJCD_00465	8.38e-185	kduD	1.1.1.127	-	IQ	ko:K00065	ko00040,map00040	ko00000,ko00001,ko01000	Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
APMKGJCD_00466	3.8e-225	-	-	-	K	ko:K02525	-	ko00000,ko03000	Transcriptional regulator, LacI family
APMKGJCD_00467	1.01e-167	yhdP	-	-	S	-	-	-	Transporter associated domain
APMKGJCD_00468	1.87e-129	yhdP	-	-	S	-	-	-	Transporter associated domain
APMKGJCD_00469	1.62e-80	-	-	-	-	-	-	-	-
APMKGJCD_00470	5.23e-97	hsp1	-	-	O	ko:K13993	ko04141,map04141	ko00000,ko00001,ko03110	Belongs to the small heat shock protein (HSP20) family
APMKGJCD_00471	0.0	-	-	-	E	-	-	-	Amino Acid
APMKGJCD_00472	2.74e-207	yvgN	-	-	S	-	-	-	Aldo keto reductase
APMKGJCD_00473	6.97e-05	-	-	-	-	-	-	-	-
APMKGJCD_00474	0.0	yfgQ	-	-	P	ko:K12952	-	ko00000,ko01000	E1-E2 ATPase
APMKGJCD_00475	8.76e-121	-	-	-	K	-	-	-	Domain of unknown function (DUF1836)
APMKGJCD_00476	0.0	glpQ4	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	phosphodiesterase
APMKGJCD_00477	0.0	adhE	1.1.1.1, 1.2.1.10	-	C	ko:K04072	ko00010,ko00071,ko00350,ko00620,ko00625,ko00626,ko00650,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00620,map00625,map00626,map00650,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	belongs to the iron- containing alcohol dehydrogenase family
APMKGJCD_00478	3.32e-122	-	-	-	M	-	-	-	LysM domain protein
APMKGJCD_00479	0.0	-	-	-	M	-	-	-	Leucine-rich repeat (LRR) protein
APMKGJCD_00480	1.64e-88	-	-	-	M	-	-	-	LysM domain protein
APMKGJCD_00482	3.71e-76	lysM	-	-	M	-	-	-	LysM domain
APMKGJCD_00484	1.38e-126	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
APMKGJCD_00485	1.66e-212	kduI	5.3.1.17	-	G	ko:K01815	ko00040,map00040	ko00000,ko00001,ko01000	Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
APMKGJCD_00486	1.65e-220	kdgK	2.7.1.45	-	G	ko:K00874	ko00030,ko01100,ko01120,ko01200,map00030,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	pfkB family carbohydrate kinase
APMKGJCD_00487	3.85e-280	ackA	2.7.2.1	-	F	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
APMKGJCD_00488	9.44e-82	-	-	-	S	-	-	-	3D domain
APMKGJCD_00489	0.0	-	-	-	M	ko:K01992	-	ko00000,ko00002,ko02000	Exporter of polyketide antibiotics
APMKGJCD_00490	1.21e-213	ybhF_1	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter
APMKGJCD_00491	1.76e-153	yagB	-	-	S	ko:K06950	-	ko00000	Metal dependent phosphohydrolases with conserved 'HD' motif.
APMKGJCD_00492	2.58e-264	-	-	-	V	-	-	-	MatE
APMKGJCD_00493	0.0	uxaC	5.3.1.12	-	G	ko:K01812	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko00002,ko01000	glucuronate isomerase
APMKGJCD_00494	0.0	-	-	-	G	ko:K03292	-	ko00000	MFS/sugar transport protein
APMKGJCD_00495	0.0	-	3.2.1.20	GH31	G	ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 31 family
APMKGJCD_00496	1.03e-207	-	-	-	EG	ko:K16321	-	ko00000,ko02000	GntP family permease
APMKGJCD_00497	1.7e-104	eda	4.1.2.14, 4.1.3.42	-	G	ko:K01625	ko00030,ko00630,ko01100,ko01120,ko01200,map00030,map00630,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	KDPG and KHG aldolase
APMKGJCD_00498	2.17e-135	kdgK	2.7.1.45	-	G	ko:K00874	ko00030,ko01100,ko01120,ko01200,map00030,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	pfkB family carbohydrate kinase
APMKGJCD_00499	5.33e-305	uxaC	5.3.1.12	-	G	ko:K01812	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko00002,ko01000	glucuronate isomerase
APMKGJCD_00500	1.34e-45	-	-	-	-	-	-	-	-
APMKGJCD_00501	0.0	uxuT	-	-	G	ko:K03292,ko:K16210	-	ko00000,ko02000	MFS/sugar transport protein
APMKGJCD_00502	7.56e-119	kdgR	-	-	K	-	-	-	FCD domain
APMKGJCD_00503	1.02e-256	uxuA	4.2.1.8	-	G	ko:K01686	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the dehydration of D-mannonate
APMKGJCD_00504	0.0	uxuB	1.1.1.57	-	G	ko:K00040	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko00002,ko01000	Mannitol dehydrogenase C-terminal domain
APMKGJCD_00505	4.07e-214	yqhA	-	-	G	-	-	-	Aldose 1-epimerase
APMKGJCD_00506	3.17e-157	-	-	-	G	-	-	-	Belongs to the phosphoglycerate mutase family
APMKGJCD_00507	1.41e-240	-	-	-	C	-	-	-	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
APMKGJCD_00508	4.54e-222	gntK	2.7.1.12	-	G	ko:K00851	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko01000	Belongs to the FGGY kinase family
APMKGJCD_00509	3.28e-133	gntK	2.7.1.12	-	G	ko:K00851	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko01000	Belongs to the FGGY kinase family
APMKGJCD_00510	2.36e-217	gntZ	1.1.1.343, 1.1.1.44	-	G	ko:K00033	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Dehydrogenase
APMKGJCD_00511	3.03e-166	-	-	-	K	-	-	-	FCD domain
APMKGJCD_00512	1.04e-271	uxuA	4.2.1.8	-	G	ko:K01686	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the dehydration of D-mannonate
APMKGJCD_00513	7.78e-236	exuR	-	-	K	ko:K02529	-	ko00000,ko03000	Periplasmic binding protein domain
APMKGJCD_00514	0.0	-	-	-	G	ko:K03292	-	ko00000	MFS/sugar transport protein
APMKGJCD_00515	0.0	-	5.1.2.7	-	S	ko:K21619	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko01000	tagaturonate epimerase
APMKGJCD_00516	0.0	uxaC	5.3.1.12	-	G	ko:K01812	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko00002,ko01000	glucuronate isomerase
APMKGJCD_00517	3.37e-290	-	-	-	S	-	-	-	module of peptide synthetase
APMKGJCD_00519	0.0	-	-	-	EGP	-	-	-	Major Facilitator
APMKGJCD_00523	2.65e-177	-	-	-	-	-	-	-	-
APMKGJCD_00524	1.42e-118	ebsC	-	-	J	ko:K03976	-	ko00000,ko01000,ko03016	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
APMKGJCD_00525	3.02e-170	gntR1	-	-	K	-	-	-	UbiC transcription regulator-associated domain protein
APMKGJCD_00526	4.33e-161	zmp3	-	-	O	-	-	-	Zinc-dependent metalloprotease
APMKGJCD_00527	1.68e-109	greA	-	-	K	ko:K03624	-	ko00000,ko03021	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
APMKGJCD_00528	6.37e-102	-	-	-	-	-	-	-	-
APMKGJCD_00529	2.4e-181	agrA	-	-	K	ko:K07707	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko02022	LytTr DNA-binding domain
APMKGJCD_00530	1.53e-304	pltK	2.7.13.3	-	T	ko:K07706	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	GHKL domain
APMKGJCD_00531	2.35e-303	-	-	-	T	-	-	-	protein histidine kinase activity
APMKGJCD_00532	3.97e-173	-	-	-	IQ	-	-	-	Oxidoreductase, short chain dehydrogenase reductase family protein
APMKGJCD_00534	1.79e-214	rluA	5.4.99.23, 5.4.99.28, 5.4.99.29	-	J	ko:K06177,ko:K06180	-	ko00000,ko01000,ko03009,ko03016	Responsible for synthesis of pseudouridine from uracil
APMKGJCD_00535	1.4e-99	uspA3	-	-	T	-	-	-	universal stress protein
APMKGJCD_00536	1.36e-132	yeaB	-	-	P	-	-	-	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
APMKGJCD_00537	2.76e-115	-	-	-	EGP	-	-	-	Major Facilitator
APMKGJCD_00538	4.91e-88	-	-	-	EGP	-	-	-	Major Facilitator
APMKGJCD_00539	5.02e-16	-	-	-	K	-	-	-	transcriptional regulator
APMKGJCD_00540	2.7e-68	-	-	-	K	-	-	-	transcriptional regulator
APMKGJCD_00541	0.0	oppA1	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
APMKGJCD_00542	3.95e-224	oppC	-	-	EP	ko:K02034	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
APMKGJCD_00543	1.14e-229	oppB	-	-	P	ko:K02033,ko:K02034	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
APMKGJCD_00544	8.35e-230	oppF	-	-	P	ko:K02032	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
APMKGJCD_00545	6.49e-245	oppD	-	-	P	ko:K02031,ko:K15583	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
APMKGJCD_00546	6.65e-104	-	-	-	K	-	-	-	Winged helix-turn-helix transcription repressor, HrcA DNA-binding
APMKGJCD_00547	1.05e-250	lplA	6.3.1.20	-	H	ko:K03800	ko00785,ko01100,map00785,map01100	ko00000,ko00001,ko01000	Lipoate-protein ligase
APMKGJCD_00548	8.07e-91	-	-	-	-	-	-	-	-
APMKGJCD_00549	3.3e-63	-	-	-	-	-	-	-	-
APMKGJCD_00550	0.0	xylA	5.3.1.5	-	G	ko:K01805	ko00040,ko00051,ko01100,map00040,map00051,map01100	ko00000,ko00001,ko01000	Belongs to the xylose isomerase family
APMKGJCD_00551	0.0	xylB	2.7.1.17	-	G	ko:K00854	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko00002,ko01000	Xylulose kinase
APMKGJCD_00552	4.03e-288	xylT	-	-	EGP	-	-	-	Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family
APMKGJCD_00554	7.71e-182	budC	1.1.1.304, 1.1.1.76	-	IQ	ko:K03366	ko00650,map00650	ko00000,ko00001,ko01000	reductase
APMKGJCD_00555	1.52e-90	frataxin	-	-	S	ko:K05937	-	ko00000	Domain of unknown function (DU1801)
APMKGJCD_00556	5.17e-179	-	-	-	S	-	-	-	membrane
APMKGJCD_00557	2.79e-224	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
APMKGJCD_00558	1.53e-12	-	-	-	T	-	-	-	diguanylate cyclase
APMKGJCD_00559	3.67e-294	-	-	-	-	-	-	-	-
APMKGJCD_00561	5.81e-131	yobS	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
APMKGJCD_00562	2.05e-99	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
APMKGJCD_00563	5.66e-105	yphH	-	-	S	-	-	-	Cupin domain
APMKGJCD_00564	1.64e-72	yphJ	4.1.1.44	-	S	ko:K01607	ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220	ko00000,ko00001,ko01000	decarboxylase
APMKGJCD_00565	2.32e-193	-	-	-	G	-	-	-	Glycosyl hydrolases family 8
APMKGJCD_00566	2.88e-44	-	-	-	G	-	-	-	Glycosyl hydrolases family 8
APMKGJCD_00567	6.44e-214	-	3.5.1.28	-	M	ko:K01447	-	ko00000,ko01000	hydrolase, family 25
APMKGJCD_00568	1.11e-192	-	-	-	S	-	-	-	Zinc-dependent metalloprotease
APMKGJCD_00569	2.12e-136	tag	3.2.2.20	-	L	ko:K01246	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	glycosylase
APMKGJCD_00570	1.72e-267	sbcD	-	-	L	ko:K03547	-	ko00000,ko03400	SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity
APMKGJCD_00571	0.0	sbcC	-	-	L	ko:K03546	-	ko00000,ko03400	Putative exonuclease SbcCD, C subunit
APMKGJCD_00572	1.93e-241	pva2	3.5.1.24	-	M	ko:K01442	ko00120,ko00121,ko01100,map00120,map00121,map01100	ko00000,ko00001,ko01000	Linear amide C-N hydrolases, choloylglycine hydrolase family
APMKGJCD_00573	0.0	-	3.2.1.21, 3.2.1.52	GH3	G	ko:K01207,ko:K05349	ko00460,ko00500,ko00520,ko00531,ko00940,ko01100,ko01110,ko01501,map00460,map00500,map00520,map00531,map00940,map01100,map01110,map01501	ko00000,ko00001,ko00002,ko01000	hydrolase, family 3
APMKGJCD_00575	0.0	oppA	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
APMKGJCD_00576	1.62e-129	tag2	3.2.2.20	-	L	ko:K01246	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	glycosylase
APMKGJCD_00577	2.8e-188	-	-	-	P	ko:K02073	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the nlpA lipoprotein family
APMKGJCD_00578	1.87e-248	metN	-	-	P	ko:K02071	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
APMKGJCD_00579	2.02e-147	metI	-	-	P	ko:K02072	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
APMKGJCD_00580	1.27e-226	-	-	-	EG	-	-	-	EamA-like transporter family
APMKGJCD_00581	1.49e-43	-	-	-	-	-	-	-	-
APMKGJCD_00582	7.22e-237	tas	-	-	C	-	-	-	Aldo/keto reductase family
APMKGJCD_00583	3.46e-87	-	-	-	E	ko:K02437	ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200	ko00000,ko00001,ko00002	glycine cleavage
APMKGJCD_00584	3.24e-250	-	6.3.1.20	-	H	ko:K03800	ko00785,ko01100,map00785,map01100	ko00000,ko00001,ko01000	Lipoate-protein ligase
APMKGJCD_00585	2.56e-70	-	-	-	-	-	-	-	-
APMKGJCD_00586	0.0	-	-	-	M	-	-	-	domain, Protein
APMKGJCD_00587	0.0	oppA	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding proteins, family 5 Middle
APMKGJCD_00588	2.32e-282	mutY	-	-	L	ko:K03575	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	A G-specific adenine glycosylase
APMKGJCD_00589	2.63e-69	-	-	-	-	-	-	-	-
APMKGJCD_00590	1.47e-144	mhqD	-	-	S	ko:K06999	-	ko00000	Dienelactone hydrolase family
APMKGJCD_00591	2.32e-43	cspC	-	-	K	ko:K03704	-	ko00000,ko03000	Cold shock protein
APMKGJCD_00592	3.1e-51	-	-	-	S	-	-	-	Cytochrome B5
APMKGJCD_00594	6.14e-45	-	-	-	-	-	-	-	-
APMKGJCD_00596	6.1e-160	yrkL	-	-	S	-	-	-	Flavodoxin-like fold
APMKGJCD_00597	8.02e-25	-	-	-	-	-	-	-	-
APMKGJCD_00598	9.11e-196	thiD	2.7.1.49, 2.7.4.7	-	H	ko:K00941	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Phosphomethylpyrimidine kinase
APMKGJCD_00599	9.2e-64	-	-	-	-	-	-	-	-
APMKGJCD_00600	3.08e-306	codA	3.5.4.1	-	F	ko:K01485	ko00240,ko00330,ko01100,map00240,map00330,map01100	ko00000,ko00001,ko01000	cytosine deaminase
APMKGJCD_00601	1.89e-110	-	-	-	-	-	-	-	-
APMKGJCD_00602	6.64e-190	rnhA	3.1.26.4	-	L	ko:K03469	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
APMKGJCD_00603	6.33e-109	-	-	-	S	ko:K04750	-	ko00000	3-demethylubiquinone-9 3-methyltransferase
APMKGJCD_00604	3.21e-148	maa	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	Maltose O-acetyltransferase
APMKGJCD_00605	0.0	-	-	-	U	ko:K03451	-	ko00000	Belongs to the BCCT transporter (TC 2.A.15) family
APMKGJCD_00606	2.33e-103	-	-	-	T	-	-	-	Universal stress protein family
APMKGJCD_00607	3.02e-160	-	-	-	S	-	-	-	HAD-hyrolase-like
APMKGJCD_00608	2.9e-91	yeaO	-	-	S	-	-	-	Protein of unknown function, DUF488
APMKGJCD_00609	1.11e-152	yxlJ	3.2.2.21	-	L	ko:K03652	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Belongs to the DNA glycosylase MPG family
APMKGJCD_00610	1.99e-201	-	-	-	K	ko:K20480	ko02024,map02024	ko00000,ko00001,ko03000	Helix-turn-helix
APMKGJCD_00611	5.93e-180	menG	2.1.1.163, 2.1.1.201	-	H	ko:K03183	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
APMKGJCD_00612	3.47e-187	map	3.4.11.18	-	E	ko:K01265	-	ko00000,ko01000,ko01002	Methionine Aminopeptidase
APMKGJCD_00613	8.06e-33	-	-	-	-	-	-	-	-
APMKGJCD_00614	0.0	-	-	-	EGP	-	-	-	Major Facilitator
APMKGJCD_00615	2.02e-106	-	-	-	S	-	-	-	ASCH
APMKGJCD_00616	2.39e-169	-	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Enoyl-(Acyl carrier protein) reductase
APMKGJCD_00617	4.21e-163	aroE	1.1.1.25	-	E	ko:K00014	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
APMKGJCD_00618	1.92e-243	-	-	-	G	ko:K08177	-	ko00000,ko02000	Major Facilitator Superfamily
APMKGJCD_00619	7.57e-97	-	-	-	K	-	-	-	Transcriptional regulator, LysR family
APMKGJCD_00620	0.0	-	-	-	EP	-	-	-	Psort location Cytoplasmic, score
APMKGJCD_00621	5.05e-161	-	-	-	S	-	-	-	DJ-1/PfpI family
APMKGJCD_00622	6.28e-73	-	-	-	K	-	-	-	Transcriptional
APMKGJCD_00623	5.72e-239	-	1.1.1.1	-	C	ko:K00001	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	nadph quinone reductase
APMKGJCD_00624	2.69e-135	etfA	1.3.1.108	-	C	ko:K03522,ko:K22432	-	ko00000,ko01000,ko04147	Electron transfer flavoprotein FAD-binding domain
APMKGJCD_00625	1.06e-35	etfA	1.3.1.108	-	C	ko:K03522,ko:K22432	-	ko00000,ko01000,ko04147	Electron transfer flavoprotein FAD-binding domain
APMKGJCD_00626	3.03e-186	fixA	-	-	C	ko:K03521	-	ko00000	Electron transfer flavoprotein domain
APMKGJCD_00627	3.2e-265	-	1.3.8.1, 1.3.8.7	-	I	ko:K00248,ko:K00249,ko:K18244	ko00071,ko00280,ko00410,ko00640,ko00650,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko03320,map00071,map00280,map00410,map00640,map00650,map01100,map01110,map01120,map01130,map01200,map01212,map03320	ko00000,ko00001,ko00002,ko01000	Acyl-CoA dehydrogenase, C-terminal domain
APMKGJCD_00628	3.25e-251	galM1	5.1.3.3	-	G	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the interconversion of alpha and beta anomers of maltose
APMKGJCD_00629	0.0	pgm	5.4.2.2	-	G	ko:K01835	ko00010,ko00030,ko00052,ko00230,ko00500,ko00520,ko00521,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00052,map00230,map00500,map00520,map00521,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
APMKGJCD_00630	2.95e-50	-	-	-	-	-	-	-	-
APMKGJCD_00631	0.0	lacP	-	-	G	ko:K11104,ko:K16209	-	ko00000,ko02000	Transporter
APMKGJCD_00632	8.76e-282	galK	2.7.1.6	-	F	ko:K00849	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
APMKGJCD_00633	5.36e-247	galE	5.1.3.2	-	M	ko:K01784	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the NAD(P)-dependent epimerase dehydratase family
APMKGJCD_00634	0.0	galT	2.7.7.12	-	G	ko:K00965	ko00052,ko00520,ko01100,ko04917,map00052,map00520,map01100,map04917	ko00000,ko00001,ko00002,ko01000	UDP-glucose--hexose-1-phosphate uridylyltransferase
APMKGJCD_00635	3.73e-239	galR	-	-	K	ko:K02529	-	ko00000,ko03000	Transcriptional regulator
APMKGJCD_00637	0.0	rtpR	1.17.4.2	-	F	ko:K00527	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000	ribonucleoside-triphosphate reductase activity
APMKGJCD_00638	3.68e-119	-	-	-	S	-	-	-	Cob(I)alamin adenosyltransferase
APMKGJCD_00639	3.84e-54	pepO	-	-	O	ko:K07386	-	ko00000,ko01000,ko01002	Peptidase family M13
APMKGJCD_00640	0.0	-	-	-	M	-	-	-	domain protein
APMKGJCD_00641	1.18e-220	-	-	-	-	-	-	-	-
APMKGJCD_00643	0.0	pepO	-	-	O	ko:K07386	-	ko00000,ko01000,ko01002	Peptidase family M13
APMKGJCD_00644	2.17e-113	-	-	-	K	-	-	-	helix_turn_helix multiple antibiotic resistance protein
APMKGJCD_00645	3.63e-11	-	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
APMKGJCD_00646	5.42e-184	-	-	-	-	-	-	-	-
APMKGJCD_00647	5.18e-109	-	-	-	T	-	-	-	Belongs to the universal stress protein A family
APMKGJCD_00649	1.51e-236	yibE	-	-	S	-	-	-	overlaps another CDS with the same product name
APMKGJCD_00650	5.61e-151	yibF	-	-	S	-	-	-	overlaps another CDS with the same product name
APMKGJCD_00653	6.37e-236	-	3.2.1.96, 3.5.1.28	GH73	M	ko:K01227,ko:K01447,ko:K13714,ko:K13731	ko00511,ko05100,map00511,map05100	ko00000,ko00001,ko01000	N-acetylmuramoyl-L-alanine amidase
APMKGJCD_00654	2.56e-119	perR	-	-	P	ko:K03711,ko:K09825	-	ko00000,ko03000	Belongs to the Fur family
APMKGJCD_00655	1.41e-144	-	-	-	S	-	-	-	VIT family
APMKGJCD_00656	8.83e-151	-	-	-	S	-	-	-	membrane
APMKGJCD_00657	0.0	ybeC	-	-	E	-	-	-	amino acid
APMKGJCD_00658	4.23e-104	yoaA	-	-	J	-	-	-	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
APMKGJCD_00659	6.62e-209	pgl	3.1.1.31	-	G	ko:K07404	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Lactonase, 7-bladed beta-propeller
APMKGJCD_00660	2.61e-18	pgl	3.1.1.31	-	G	ko:K07404	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Lactonase, 7-bladed beta-propeller
APMKGJCD_00661	8.66e-227	-	-	-	-	-	-	-	-
APMKGJCD_00662	1.23e-159	-	-	-	-	-	-	-	-
APMKGJCD_00663	0.0	uvrB3	3.1.12.1	-	KL	ko:K07464	-	ko00000,ko01000,ko02048	DEAD_2
APMKGJCD_00664	5.26e-58	-	-	-	-	-	-	-	-
APMKGJCD_00665	1.35e-42	-	-	-	-	-	-	-	-
APMKGJCD_00666	2.61e-76	-	-	-	-	-	-	-	-
APMKGJCD_00667	3.04e-202	pstS	-	-	P	ko:K02040	ko02010,ko02020,ko05152,map02010,map02020,map05152	ko00000,ko00001,ko00002,ko02000	Phosphate
APMKGJCD_00668	4.2e-215	pstC	-	-	P	ko:K02037	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	probably responsible for the translocation of the substrate across the membrane
APMKGJCD_00669	4.53e-123	pstA	-	-	P	ko:K02038	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Phosphate transport system permease protein PstA
APMKGJCD_00670	1.3e-49	pstA	-	-	P	ko:K02038	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Phosphate transport system permease protein PstA
APMKGJCD_00671	5.9e-190	pstB2	3.6.3.27	-	P	ko:K02036	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
APMKGJCD_00672	8.43e-262	potD	-	-	P	ko:K11069	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
APMKGJCD_00673	5.98e-174	potC	-	-	P	ko:K11070	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
APMKGJCD_00674	2.91e-189	potB	-	-	P	ko:K11071	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
APMKGJCD_00675	2.01e-267	potA	3.6.3.30, 3.6.3.31	-	P	ko:K02010,ko:K11072	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
APMKGJCD_00676	8.39e-54	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
APMKGJCD_00677	1.95e-41	yfhR3	-	-	S	ko:K06889	-	ko00000	Serine hydrolase (FSH1)
APMKGJCD_00678	2.9e-53	yfhR3	-	-	S	ko:K06889	-	ko00000	Serine hydrolase (FSH1)
APMKGJCD_00679	8.66e-229	-	-	-	U	ko:K07241	-	ko00000,ko02000	High-affinity nickel-transport protein
APMKGJCD_00680	2.21e-160	glpF	-	-	U	ko:K02440	-	ko00000,ko02000	Belongs to the MIP aquaporin (TC 1.A.8) family
APMKGJCD_00681	8.69e-193	larE	-	-	S	ko:K06864	-	ko00000	NAD synthase
APMKGJCD_00682	2.04e-294	larC	4.99.1.12	-	S	ko:K09121	-	ko00000,ko01000	Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2 ), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor- dependent enzymes
APMKGJCD_00683	1.37e-172	larB	-	-	S	ko:K06898	-	ko00000	AIR carboxylase
APMKGJCD_00684	7.27e-303	larA	5.1.2.1	-	S	ko:K22373	ko00620,map00620	ko00000,ko00001,ko01000	Domain of unknown function (DUF2088)
APMKGJCD_00685	4.67e-163	rcfB	-	-	K	-	-	-	Crp-like helix-turn-helix domain
APMKGJCD_00686	0.0	gadB	4.1.1.15, 4.1.2.27	-	E	ko:K01580,ko:K01634	ko00250,ko00410,ko00430,ko00600,ko00650,ko01100,ko01110,ko01120,ko02024,ko04071,ko04727,ko04940,map00250,map00410,map00430,map00600,map00650,map01100,map01110,map01120,map02024,map04071,map04727,map04940	ko00000,ko00001,ko00002,ko01000	Belongs to the group II decarboxylase family
APMKGJCD_00687	7.93e-91	yqeB	-	-	S	-	-	-	Pyrimidine dimer DNA glycosylase
APMKGJCD_00688	1.42e-85	-	-	-	S	-	-	-	Protein of unknown function (DUF1722)
APMKGJCD_00689	2.52e-196	-	-	-	C	-	-	-	Aldo keto reductase
APMKGJCD_00690	7.25e-206	yitS	-	-	S	-	-	-	Uncharacterised protein, DegV family COG1307
APMKGJCD_00691	4.58e-309	-	-	-	S	-	-	-	Putative threonine/serine exporter
APMKGJCD_00693	3.46e-268	natB	-	-	CP	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 family transporter protein
APMKGJCD_00694	1.8e-215	natA	-	-	S	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
APMKGJCD_00695	1.82e-316	pbuX	-	-	F	ko:K03458,ko:K16169	-	ko00000,ko02000	xanthine permease
APMKGJCD_00696	9.57e-36	-	-	-	-	-	-	-	-
APMKGJCD_00697	3.19e-240	ansB	3.5.1.1	-	EJ	ko:K01424	ko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110	ko00000,ko00001,ko01000	Asparaginase
APMKGJCD_00698	2.81e-125	-	-	-	-	-	-	-	-
APMKGJCD_00699	4.38e-100	-	-	-	-	-	-	-	-
APMKGJCD_00700	3.56e-55	-	-	-	-	-	-	-	-
APMKGJCD_00702	1.59e-10	-	-	-	-	-	-	-	-
APMKGJCD_00703	4.78e-79	-	-	-	-	-	-	-	-
APMKGJCD_00704	5.69e-154	tenA	3.5.99.2	-	K	ko:K03707	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000,ko03000	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
APMKGJCD_00705	4.31e-149	-	-	-	P	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Cobalt transport protein
APMKGJCD_00706	0.0	-	-	-	P	ko:K16786,ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter
APMKGJCD_00707	1.8e-124	-	-	-	S	ko:K16925	-	ko00000,ko00002,ko02000	ABC transporter permease
APMKGJCD_00708	2.96e-216	-	3.4.16.4	-	M	ko:K07258	ko00550,ko01100,map00550,map01100	ko00000,ko00001,ko01000,ko01002,ko01011	Belongs to the peptidase S11 family
APMKGJCD_00709	3.71e-281	-	3.4.16.4	-	M	ko:K07258	ko00550,ko01100,map00550,map01100	ko00000,ko00001,ko01000,ko01002,ko01011	Belongs to the peptidase S11 family
APMKGJCD_00710	2.53e-173	cat	2.3.1.28	-	V	ko:K19271	-	br01600,ko00000,ko01000,ko01504	Chloramphenicol acetyltransferase
APMKGJCD_00711	6.84e-80	-	-	-	S	-	-	-	LuxR family transcriptional regulator
APMKGJCD_00712	4.01e-185	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2087)
APMKGJCD_00713	4.94e-305	-	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
APMKGJCD_00714	6.68e-198	-	-	-	S	-	-	-	Alpha/beta hydrolase of unknown function (DUF915)
APMKGJCD_00715	7.18e-193	-	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
APMKGJCD_00716	7.94e-126	-	-	-	-	-	-	-	-
APMKGJCD_00717	6.95e-10	-	-	-	-	-	-	-	-
APMKGJCD_00718	1.06e-229	iunH1	3.2.2.1	-	F	ko:K01239	ko00230,ko00760,ko01100,map00230,map00760,map01100	ko00000,ko00001,ko01000	nucleoside hydrolase
APMKGJCD_00719	2.86e-244	-	-	-	S	-	-	-	Protease prsW family
APMKGJCD_00720	1.7e-186	-	-	-	S	-	-	-	Alpha/beta hydrolase of unknown function (DUF915)
APMKGJCD_00721	8.68e-231	yumC	1.18.1.2, 1.19.1.1	-	C	ko:K21567	-	ko00000,ko01000	Ferredoxin--NADP reductase
APMKGJCD_00722	0.0	ltaS	2.7.8.20	-	M	ko:K19005	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
APMKGJCD_00723	2.32e-159	pgm3	-	-	G	-	-	-	phosphoglycerate mutase family
APMKGJCD_00724	3.26e-101	yyaT	-	-	K	ko:K02348	-	ko00000	protein acetylation
APMKGJCD_00725	3.35e-89	lytE	-	-	M	ko:K21471	-	ko00000,ko01000,ko01002,ko01011	NlpC P60 family
APMKGJCD_00726	1.69e-107	-	-	-	K	-	-	-	MerR family regulatory protein
APMKGJCD_00727	3.27e-118	-	-	-	K	-	-	-	Transcriptional regulator PadR-like family
APMKGJCD_00728	0.0	ydiC1	-	-	EGP	-	-	-	Major Facilitator
APMKGJCD_00729	0.0	ydgH	-	-	S	ko:K06994	-	ko00000	MMPL family
APMKGJCD_00730	2.21e-21	-	-	-	-	-	-	-	-
APMKGJCD_00731	2.77e-172	-	1.1.1.304, 1.1.1.76	-	IQ	ko:K03366	ko00650,map00650	ko00000,ko00001,ko01000	reductase
APMKGJCD_00732	2.01e-242	-	3.5.1.24	-	M	ko:K01442	ko00120,ko00121,ko01100,map00120,map00121,map01100	ko00000,ko00001,ko01000	Linear amide C-N hydrolase, choloylglycine hydrolase family protein
APMKGJCD_00733	5.46e-233	-	-	-	S	-	-	-	DUF218 domain
APMKGJCD_00734	1.77e-143	acmA	-	-	NU	-	-	-	mannosyl-glycoprotein
APMKGJCD_00735	1.5e-312	-	3.4.16.4	-	V	ko:K01286	-	ko00000,ko01000	SH3-like domain
APMKGJCD_00736	4.93e-164	-	-	-	P	-	-	-	integral membrane protein, YkoY family
APMKGJCD_00737	1.71e-204	glxR	1.1.1.31	-	I	ko:K00020	ko00280,ko01100,map00280,map01100	ko00000,ko00001,ko01000	Dehydrogenase
APMKGJCD_00739	1.14e-177	XK27_08845	-	-	S	ko:K05833	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
APMKGJCD_00740	1.27e-196	XK27_08840	-	-	U	ko:K05832	-	ko00000,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
APMKGJCD_00741	1.68e-228	ABC-SBP	-	-	S	ko:K01989	-	ko00000,ko00002,ko02000	ABC transporter
APMKGJCD_00742	2.96e-209	-	-	-	S	-	-	-	Uncharacterised protein, DegV family COG1307
APMKGJCD_00743	2.09e-108	XK27_00670	-	-	S	ko:K01989	-	ko00000,ko00002,ko02000	ABC transporter
APMKGJCD_00744	1.02e-90	XK27_00670	-	-	S	ko:K01989	-	ko00000,ko00002,ko02000	ABC transporter
APMKGJCD_00745	8.13e-215	WQ51_06230	-	-	U	ko:K05832	-	ko00000,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
APMKGJCD_00746	9.34e-155	-	-	-	S	ko:K05833	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
APMKGJCD_00747	3.27e-159	XK27_07075	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
APMKGJCD_00748	1.57e-89	-	-	-	E	-	-	-	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
APMKGJCD_00749	3.79e-306	-	-	-	S	-	-	-	ABC transporter, ATP-binding protein
APMKGJCD_00750	5.7e-51	-	-	-	S	-	-	-	ABC transporter, ATP-binding protein
APMKGJCD_00751	4.19e-113	yciB	-	-	M	-	-	-	ErfK YbiS YcfS YnhG
APMKGJCD_00752	9.02e-228	-	3.4.11.5	-	E	ko:K01259	ko00330,map00330	ko00000,ko00001,ko01000,ko01002	Releases the N-terminal proline from various substrates
APMKGJCD_00753	0.0	pepX	3.4.14.11	-	E	ko:K01281	-	ko00000,ko01000,ko01002	Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
APMKGJCD_00754	0.0	yhdG	-	-	E	ko:K03294	-	ko00000	Amino Acid
APMKGJCD_00755	6.89e-97	apfA	3.6.1.61	-	F	ko:K18445	ko00230,map00230	ko00000,ko00001,ko01000	Nudix hydrolase
APMKGJCD_00756	1.3e-97	gmk2	2.7.4.8	-	F	ko:K00942	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko00002,ko01000	Guanylate kinase
APMKGJCD_00757	2.62e-109	zur	-	-	P	ko:K02076,ko:K03711	-	ko00000,ko03000	Belongs to the Fur family
APMKGJCD_00758	4.52e-47	-	3.2.1.14	GH18	-	ko:K01183	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	-
APMKGJCD_00759	1.87e-219	-	-	-	-	-	-	-	-
APMKGJCD_00760	8.35e-175	glnQ	-	-	E	ko:K10041	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
APMKGJCD_00761	3.69e-194	glnH	-	-	ET	ko:K10039	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
APMKGJCD_00762	1.5e-142	glnM	-	-	P	ko:K10040	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
APMKGJCD_00763	1.13e-140	glnP	-	-	P	ko:K10040	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
APMKGJCD_00764	2.4e-296	hflX	-	-	S	ko:K03665	-	ko00000,ko03009	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
APMKGJCD_00765	0.0	oppA	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
APMKGJCD_00766	0.0	oppA	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
APMKGJCD_00767	4.08e-63	oppB	-	-	P	ko:K15581	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC-type dipeptide oligopeptide nickel transport systems, permease components
APMKGJCD_00768	5.3e-128	oppB	-	-	P	ko:K15581	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC-type dipeptide oligopeptide nickel transport systems, permease components
APMKGJCD_00769	1.11e-238	oppC	-	-	EP	ko:K15582	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC-type dipeptide oligopeptide nickel transport systems, permease components
APMKGJCD_00770	1.24e-259	oppD	-	-	P	ko:K02031,ko:K15583	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
APMKGJCD_00771	9.38e-229	oppF	-	-	P	ko:K10823	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
APMKGJCD_00772	3.18e-155	pgm3	-	-	G	-	-	-	phosphoglycerate mutase
APMKGJCD_00773	0.0	yjbQ	-	-	P	ko:K03455,ko:K03499	-	ko00000,ko02000	TrkA C-terminal domain protein
APMKGJCD_00774	0.0	helD	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	DNA helicase
APMKGJCD_00775	1.68e-225	coaA	2.7.1.33	-	F	ko:K00867	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Pantothenic acid kinase
APMKGJCD_00776	6.78e-136	-	-	-	K	-	-	-	acetyltransferase
APMKGJCD_00777	1.58e-27	guaA	6.3.5.2	-	F	ko:K01951	ko00230,ko00983,ko01100,map00230,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko01002	Catalyzes the synthesis of GMP from XMP
APMKGJCD_00778	1.36e-315	guaA	6.3.5.2	-	F	ko:K01951	ko00230,ko00983,ko01100,map00230,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko01002	Catalyzes the synthesis of GMP from XMP
APMKGJCD_00779	0.0	rafA	3.2.1.22	-	G	ko:K07407	ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603	ko00000,ko00001,ko01000	alpha-galactosidase
APMKGJCD_00780	2.56e-95	-	-	-	S	-	-	-	Iron-sulphur cluster biosynthesis
APMKGJCD_00781	0.0	pepN	3.4.11.2	-	E	ko:K01256	ko00480,ko01100,map00480,map01100	ko00000,ko00001,ko01000,ko01002	aminopeptidase
APMKGJCD_00782	0.0	arcD	-	-	E	ko:K03758	-	ko00000,ko02000	Arginine ornithine antiporter
APMKGJCD_00783	2.86e-184	pepDA	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
APMKGJCD_00784	1.09e-154	pepDA	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
APMKGJCD_00785	1.2e-122	-	1.5.1.40	-	S	ko:K06988	-	ko00000,ko01000	NADP oxidoreductase coenzyme F420-dependent
APMKGJCD_00786	1.56e-93	-	-	-	K	-	-	-	Transcriptional regulator
APMKGJCD_00787	0.0	recQ	3.6.4.12	-	L	ko:K03654	ko03018,map03018	ko00000,ko00001,ko01000,ko03400	ATP-dependent DNA helicase RecQ
APMKGJCD_00788	0.0	abfA	3.2.1.55	GH51	G	ko:K01209	ko00520,map00520	ko00000,ko00001,ko01000	Alpha-L-arabinofuranosidase C-terminus
APMKGJCD_00789	1.12e-303	lacY	-	-	G	ko:K02532	-	ko00000,ko02000	Oligosaccharide H symporter
APMKGJCD_00790	1.43e-256	abf	-	-	G	-	-	-	Belongs to the glycosyl hydrolase 43 family
APMKGJCD_00791	1.96e-223	-	-	-	K	-	-	-	transcriptional regulator, ArsR family
APMKGJCD_00792	4.67e-116	maa	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	Maltose acetyltransferase
APMKGJCD_00793	2.23e-250	araR	-	-	K	ko:K02103	-	ko00000,ko03000	Transcriptional regulator
APMKGJCD_00794	0.0	araP	-	-	U	-	-	-	Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family
APMKGJCD_00795	0.0	araB	2.7.1.16	-	G	ko:K00853	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko01000	carbohydrate kinase FGGY
APMKGJCD_00796	2.23e-177	araD	5.1.3.4	-	G	ko:K03077	ko00040,ko00053,ko01100,ko01120,map00040,map00053,map01100,map01120	ko00000,ko00001,ko00002,ko01000	links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source
APMKGJCD_00797	0.0	araA	5.3.1.4	-	G	ko:K01804	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko01000	Catalyzes the conversion of L-arabinose to L-ribulose
APMKGJCD_00798	7.86e-119	maa	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	Maltose O-acetyltransferase
APMKGJCD_00801	5.12e-71	-	-	-	S	ko:K02437	ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200	ko00000,ko00001,ko00002	Glycine cleavage H-protein
APMKGJCD_00802	4.38e-210	yjbO	5.4.99.23	-	J	ko:K06180	-	ko00000,ko01000,ko03009	Responsible for synthesis of pseudouridine from uracil
APMKGJCD_00803	2.05e-181	yejC	-	-	S	-	-	-	Protein of unknown function (DUF1003)
APMKGJCD_00804	1.04e-136	-	-	-	K	ko:K06977	-	ko00000	acetyltransferase
APMKGJCD_00805	5.39e-111	nimA	-	-	S	ko:K07005	-	ko00000	resistance protein
APMKGJCD_00806	1.99e-116	paiA	2.3.1.57	-	K	ko:K22441	-	ko00000,ko01000	Acetyltransferase (GNAT) domain
APMKGJCD_00807	7.06e-93	-	-	-	-	-	-	-	-
APMKGJCD_00808	3.04e-278	-	-	-	EGP	-	-	-	Transmembrane secretion effector
APMKGJCD_00809	5.06e-298	pyrP	-	-	F	ko:K02824	-	ko00000,ko02000	Permease
APMKGJCD_00810	8.01e-66	azlD	-	-	S	-	-	-	Branched-chain amino acid transport protein (AzlD)
APMKGJCD_00811	1.38e-138	azlC	-	-	E	-	-	-	branched-chain amino acid
APMKGJCD_00812	5.16e-50	-	-	-	K	-	-	-	MerR HTH family regulatory protein
APMKGJCD_00813	5.93e-152	-	-	-	S	-	-	-	Domain of unknown function (DUF4811)
APMKGJCD_00814	0.0	ycnB	-	-	U	-	-	-	Belongs to the major facilitator superfamily
APMKGJCD_00815	1.73e-97	-	-	-	K	-	-	-	MerR HTH family regulatory protein
APMKGJCD_00816	3.51e-131	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
APMKGJCD_00817	4.51e-205	-	-	-	P	ko:K16264	-	ko00000,ko02000	cation diffusion facilitator family transporter
APMKGJCD_00818	1.46e-155	mntR	-	-	K	ko:K03709	-	ko00000,ko03000	iron dependent repressor
APMKGJCD_00819	1.41e-165	-	-	-	S	-	-	-	Putative threonine/serine exporter
APMKGJCD_00820	7.85e-96	-	-	-	S	-	-	-	Threonine/Serine exporter, ThrE
APMKGJCD_00821	2.5e-155	-	-	-	I	-	-	-	phosphatase
APMKGJCD_00822	1.4e-191	-	-	-	I	-	-	-	alpha/beta hydrolase fold
APMKGJCD_00824	0.0	lysP	-	-	E	ko:K03293,ko:K11733	-	ko00000,ko02000	amino acid
APMKGJCD_00825	2.42e-147	dgk2	-	-	F	-	-	-	deoxynucleoside kinase
APMKGJCD_00826	2.57e-290	serS	6.1.1.11	-	J	ko:K01875	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
APMKGJCD_00835	2.31e-100	ctsR	-	-	K	ko:K03708	-	ko00000,ko03000	Belongs to the CtsR family
APMKGJCD_00836	0.0	clpC	-	-	O	ko:K03696	ko01100,map01100	ko00000,ko03110	Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
APMKGJCD_00837	3.31e-136	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
APMKGJCD_00838	0.0	rpoB	2.7.7.6	-	K	ko:K03043	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
APMKGJCD_00839	0.0	rpoC	2.7.7.6	-	K	ko:K03046	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
APMKGJCD_00840	1.03e-155	comC	3.4.23.43	-	NOU	ko:K02236	-	ko00000,ko00002,ko01000,ko02044	Bacterial Peptidase A24 N-terminal domain
APMKGJCD_00841	1.46e-92	rpsL	-	-	J	ko:K02950	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
APMKGJCD_00842	7.17e-109	rpsG	-	-	J	ko:K02992	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
APMKGJCD_00843	0.0	fusA	-	-	J	ko:K02355	-	ko00000,ko03012,ko03029	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
APMKGJCD_00844	4.54e-301	mepA	-	-	V	ko:K18908	-	ko00000,ko00002,ko01504,ko02000	MATE efflux family protein
APMKGJCD_00845	4.46e-66	rpsJ	-	-	J	ko:K02946	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Involved in the binding of tRNA to the ribosomes
APMKGJCD_00846	1.19e-150	rplC	-	-	J	ko:K02906	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
APMKGJCD_00847	5.45e-138	rplD	-	-	J	ko:K02926	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the polypeptide exit tunnel
APMKGJCD_00848	4.65e-58	rplW	-	-	J	ko:K02892	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
APMKGJCD_00849	1.63e-199	rplB	-	-	J	ko:K02886	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
APMKGJCD_00850	7.56e-62	rpsS	-	-	J	ko:K02965	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
APMKGJCD_00851	9.77e-73	rplV	-	-	J	ko:K02890	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
APMKGJCD_00852	1.63e-154	rpsC	-	-	J	ko:K02982	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
APMKGJCD_00853	3.95e-98	rplP	-	-	J	ko:K02878	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
APMKGJCD_00854	3.87e-34	rpmC	-	-	J	ko:K02904	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uL29 family
APMKGJCD_00855	3.69e-54	rpsQ	-	-	J	ko:K02961	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
APMKGJCD_00856	1.04e-78	rplN	-	-	J	ko:K02874	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
APMKGJCD_00857	4.1e-67	rplX	-	-	J	ko:K02895	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
APMKGJCD_00858	3.53e-123	rplE	-	-	J	ko:K02931	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
APMKGJCD_00859	3.78e-88	rpsH	-	-	J	ko:K02994	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
APMKGJCD_00860	1.24e-122	rplF	-	-	J	ko:K02933	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
APMKGJCD_00861	8.69e-76	rplR	-	-	J	ko:K02881	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
APMKGJCD_00862	3.46e-110	rpsE	-	-	J	ko:K02988	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
APMKGJCD_00863	1.2e-33	rpmD	-	-	J	ko:K02907	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L30
APMKGJCD_00864	6.79e-90	rplO	-	-	J	ko:K02876	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to the 23S rRNA
APMKGJCD_00865	1.66e-304	secY	-	-	U	ko:K03076	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
APMKGJCD_00866	5.07e-158	adk	2.7.4.3	-	F	ko:K00939	ko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
APMKGJCD_00867	2.92e-46	infA	-	-	J	ko:K02518	-	ko00000,ko03012	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
APMKGJCD_00868	2.37e-79	rpsM	-	-	J	ko:K02952	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
APMKGJCD_00869	6.34e-81	rpsK	-	-	J	ko:K02948	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
APMKGJCD_00870	2.1e-219	rpoA	2.7.7.6	-	K	ko:K03040	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
APMKGJCD_00871	6.64e-82	rplQ	-	-	J	ko:K02879	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L17
APMKGJCD_00872	6.89e-195	ecfA1	-	-	P	ko:K16786	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
APMKGJCD_00873	3.08e-208	ecfA2	-	-	P	ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
APMKGJCD_00874	1.38e-183	ecfT	-	-	U	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
APMKGJCD_00875	1.11e-193	truA	5.4.99.12	-	J	ko:K06173	-	ko00000,ko01000,ko03016	Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
APMKGJCD_00876	6.51e-103	rplM	-	-	J	ko:K02871	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
APMKGJCD_00877	3.52e-83	rpsI	-	-	J	ko:K02996	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uS9 family
APMKGJCD_00878	1.72e-246	manA	5.3.1.8	-	G	ko:K01809	ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	mannose-6-phosphate isomerase
APMKGJCD_00879	1.73e-304	ktrB	-	-	P	ko:K03498	-	ko00000,ko02000	Potassium uptake protein
APMKGJCD_00880	2.3e-150	ktrA	-	-	P	ko:K03499	-	ko00000,ko02000	domain protein
APMKGJCD_00881	8.28e-256	ribD	1.1.1.193, 3.5.4.26	-	H	ko:K11752	ko00740,ko01100,ko01110,ko02024,map00740,map01100,map01110,map02024	ko00000,ko00001,ko00002,ko01000	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
APMKGJCD_00882	1.57e-134	ribE	2.5.1.9	-	H	ko:K00793	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Riboflavin synthase
APMKGJCD_00883	5.5e-282	ribA	3.5.4.25, 4.1.99.12	-	H	ko:K02858,ko:K14652	ko00740,ko00790,ko01100,ko01110,map00740,map00790,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate
APMKGJCD_00884	3.4e-103	ribH	2.5.1.78	-	H	ko:K00794	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin
APMKGJCD_00885	7.66e-252	asnA	6.3.1.1	-	F	ko:K01914	ko00250,ko00460,ko01100,ko01110,ko01230,map00250,map00460,map01100,map01110,map01230	ko00000,ko00001,ko01000	aspartate--ammonia ligase
APMKGJCD_00886	0.0	-	-	-	E	ko:K03294	-	ko00000	Amino Acid
APMKGJCD_00887	1.16e-239	lplL	6.3.1.20	-	H	ko:K03800	ko00785,ko01100,map00785,map01100	ko00000,ko00001,ko01000	Bacterial lipoate protein ligase C-terminus
APMKGJCD_00888	7.03e-207	brpA	-	-	K	-	-	-	Cell envelope-like function transcriptional attenuator common domain protein
APMKGJCD_00889	1.39e-119	epsB	-	-	M	-	-	-	biosynthesis protein
APMKGJCD_00890	3.32e-167	ywqD	-	-	D	-	-	-	Capsular exopolysaccharide family
APMKGJCD_00891	8.94e-155	ywqE	3.1.3.48	-	GM	ko:K01104	-	ko00000,ko01000	PHP domain protein
APMKGJCD_00892	1.51e-133	cps2D	5.1.3.2, 5.1.3.25	-	M	ko:K01784,ko:K17947	ko00052,ko00520,ko00523,ko01100,ko01130,map00052,map00520,map00523,map01100,map01130	ko00000,ko00001,ko00002,ko01000	RmlD substrate binding domain
APMKGJCD_00893	7.83e-83	tuaA	-	-	M	-	-	-	Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
APMKGJCD_00894	1.11e-88	cps4F	-	-	M	-	-	-	Glycosyl transferases group 1
APMKGJCD_00896	2.03e-66	wzx	-	-	S	ko:K03328	-	ko00000	COG2244 Membrane protein involved in the export of O-antigen and teichoic acid
APMKGJCD_00897	3.29e-12	-	-	-	S	-	-	-	Protein of unknown function C-terminal (DUF3324)
APMKGJCD_00899	1.66e-45	-	-	-	L	-	-	-	Putative transposase of IS4/5 family (DUF4096)
APMKGJCD_00900	2.26e-85	-	-	-	L	-	-	-	Transposase
APMKGJCD_00901	5.3e-49	-	-	-	L	-	-	-	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
APMKGJCD_00902	3.96e-183	soj	-	-	D	-	-	-	CobQ CobB MinD ParA nucleotide binding domain protein
APMKGJCD_00903	7.12e-32	-	-	-	S	-	-	-	Family of unknown function (DUF5388)
APMKGJCD_00904	8.95e-222	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
APMKGJCD_00905	7.33e-170	is18	-	-	L	-	-	-	COG2801 Transposase and inactivated derivatives
APMKGJCD_00906	0.0	clpL	-	-	O	ko:K04086	-	ko00000,ko03110	C-terminal, D2-small domain, of ClpB protein
APMKGJCD_00907	4.55e-185	-	-	-	L	ko:K07482	-	ko00000	Integrase core domain
APMKGJCD_00908	5.45e-278	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
APMKGJCD_00909	1.53e-260	npr	1.11.1.1	-	C	ko:K05910	-	ko00000,ko01000	Pyridine nucleotide-disulphide oxidoreductase
APMKGJCD_00910	2.9e-45	ydaT	-	-	-	-	-	-	-
APMKGJCD_00912	5.82e-124	tnpR1	-	-	L	-	-	-	Resolvase, N terminal domain
APMKGJCD_00913	2.29e-222	epsH	-	-	M	-	-	-	Glycosyl transferase family 2
APMKGJCD_00914	6.89e-82	-	-	-	M	-	-	-	Glycosyl transferases group 1
APMKGJCD_00915	9.69e-40	-	-	-	L	-	-	-	PFAM Integrase catalytic region
APMKGJCD_00917	1.4e-54	-	-	-	-	-	-	-	-
APMKGJCD_00918	8.42e-55	-	-	-	L	ko:K07483	-	ko00000	Transposase and inactivated derivatives
APMKGJCD_00919	3.62e-162	is18	-	-	L	-	-	-	COG2801 Transposase and inactivated derivatives
APMKGJCD_00920	1.75e-143	aqpZ	-	-	U	ko:K06188	-	ko00000,ko02000	Belongs to the MIP aquaporin (TC 1.A.8) family
APMKGJCD_00921	5.98e-72	-	-	-	S	-	-	-	Domain of unknown function (DU1801)
APMKGJCD_00922	0.0	epsA	-	-	I	-	-	-	PAP2 superfamily
APMKGJCD_00923	1.58e-91	def2	3.5.1.88	-	J	ko:K01462	-	ko00000,ko01000	Removes the formyl group from the N-terminal Met of newly synthesized proteins
APMKGJCD_00924	9.15e-207	-	-	-	K	-	-	-	LysR substrate binding domain
APMKGJCD_00925	0.0	yclC	4.1.1.61, 4.1.1.98	-	H	ko:K01612,ko:K03182,ko:K16874	ko00130,ko00365,ko00627,ko01100,ko01110,ko01120,ko01220,map00130,map00365,map00627,map01100,map01110,map01120,map01220	ko00000,ko00001,ko00002,ko01000	3-octaprenyl-4-hydroxybenzoate carboxy-lyase
APMKGJCD_00926	1.87e-126	ubiX	2.5.1.129	-	H	ko:K03186	ko00130,ko00627,ko00940,ko01100,ko01110,ko01120,ko01220,map00130,map00627,map00940,map01100,map01110,map01120,map01220	ko00000,ko00001,ko00002,ko01000	Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN
APMKGJCD_00927	2.34e-93	-	-	-	-	-	-	-	-
APMKGJCD_00928	2.71e-205	-	-	-	P	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC-type cobalt transport system permease component CbiQ and related transporters
APMKGJCD_00929	0.0	-	-	-	S	ko:K16786,ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	AAA domain, putative AbiEii toxin, Type IV TA system
APMKGJCD_00930	8.08e-147	-	-	-	S	ko:K16927	-	ko00000,ko00002,ko02000	ECF-type riboflavin transporter, S component
APMKGJCD_00931	1.43e-229	-	-	-	U	-	-	-	FFAT motif binding
APMKGJCD_00932	4.79e-90	-	-	-	S	-	-	-	Domain of unknown function (DUF4430)
APMKGJCD_00933	1.27e-71	-	-	-	K	-	-	-	helix_turn_helix, arabinose operon control protein
APMKGJCD_00934	2.6e-54	pduN	-	-	CQ	ko:K04028	-	ko00000	Ethanolamine utilisation protein EutN/carboxysome
APMKGJCD_00935	2.43e-172	namA	-	-	C	-	-	-	Oxidoreductase
APMKGJCD_00936	3.31e-264	-	-	-	EGP	-	-	-	Major Facilitator
APMKGJCD_00937	4.46e-258	-	-	-	EGP	-	-	-	Major Facilitator
APMKGJCD_00938	2.52e-202	dkgB	-	-	S	-	-	-	reductase
APMKGJCD_00940	4.08e-62	-	-	-	-	-	-	-	-
APMKGJCD_00941	7.16e-122	-	-	-	V	-	-	-	VanZ like family
APMKGJCD_00942	2.39e-108	ohrR	-	-	K	-	-	-	Transcriptional regulator
APMKGJCD_00943	4.3e-158	-	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
APMKGJCD_00944	3.58e-51	-	-	-	-	-	-	-	-
APMKGJCD_00945	9.72e-227	-	1.1.1.26	-	CH	ko:K00015	ko00630,ko01100,ko01110,ko01120,map00630,map01100,map01110,map01120	ko00000,ko00001,ko01000	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
APMKGJCD_00946	0.0	trePP	2.4.1.216, 2.4.1.8	GH65	G	ko:K00691,ko:K03731	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	Glycosyl hydrolase family 65 central catalytic domain
APMKGJCD_00947	1.82e-153	pgmB	5.4.2.6	-	S	ko:K01838	ko00500,map00500	ko00000,ko00001,ko01000	beta-phosphoglucomutase
APMKGJCD_00948	1.28e-57	-	-	-	S	-	-	-	haloacid dehalogenase-like hydrolase
APMKGJCD_00949	4.08e-114	-	-	-	S	-	-	-	haloacid dehalogenase-like hydrolase
APMKGJCD_00950	1.03e-155	dgk2	-	-	F	-	-	-	Deoxynucleoside kinase
APMKGJCD_00951	1.39e-74	XK27_08430	-	-	S	-	-	-	Staphylococcal protein of unknown function (DUF960)
APMKGJCD_00952	0.0	mdr	-	-	EGP	-	-	-	Major Facilitator
APMKGJCD_00953	3.39e-274	metK	2.5.1.6	-	H	ko:K00789	ko00270,ko01100,ko01110,ko01230,map00270,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
APMKGJCD_00954	1.42e-156	-	-	-	-	-	-	-	-
APMKGJCD_00955	2.78e-82	-	-	-	-	-	-	-	-
APMKGJCD_00956	1.54e-135	-	-	-	-	-	-	-	-
APMKGJCD_00957	2.83e-69	ybjQ	-	-	S	-	-	-	Belongs to the UPF0145 family
APMKGJCD_00958	1.01e-119	-	-	-	O	-	-	-	Zinc-dependent metalloprotease
APMKGJCD_00971	2.83e-58	-	-	-	L	ko:K07473	-	ko00000,ko02048	Addiction module antitoxin, RelB DinJ family
APMKGJCD_00972	5.39e-79	-	-	-	-	-	-	-	-
APMKGJCD_00973	8.4e-69	-	-	-	T	-	-	-	AMP binding
APMKGJCD_00974	5.62e-214	yycB	-	-	P	ko:K03449	-	ko00000,ko02000	Transporter, major facilitator family protein
APMKGJCD_00975	3.81e-213	isp	-	-	L	-	-	-	Transposase
APMKGJCD_00976	2.01e-53	-	-	-	-	-	-	-	-
APMKGJCD_00977	1.39e-36	-	-	-	-	-	-	-	-
APMKGJCD_00978	0.0	-	-	-	L	-	-	-	MobA MobL family protein
APMKGJCD_00979	5.99e-40	-	-	-	-	-	-	-	-
APMKGJCD_00980	2.43e-119	-	-	-	-	-	-	-	-
APMKGJCD_00981	1.53e-65	-	-	-	S	-	-	-	Cag pathogenicity island, type IV secretory system
APMKGJCD_00982	2.56e-69	-	-	-	-	-	-	-	-
APMKGJCD_00983	5.96e-137	-	-	-	-	-	-	-	-
APMKGJCD_00984	0.0	-	3.2.1.10, 3.2.1.20	GH13,GH31	G	ko:K01182,ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Alpha amylase, catalytic domain protein
APMKGJCD_00985	0.0	-	-	-	G	ko:K16211	-	ko00000,ko02000	Major Facilitator
APMKGJCD_00986	7.38e-228	cytR	-	-	K	ko:K02529,ko:K03604	-	ko00000,ko03000	Transcriptional regulator, LacI family
APMKGJCD_00988	3.6e-107	-	-	-	-	-	-	-	-
APMKGJCD_00989	0.0	oppA	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
APMKGJCD_00990	1.4e-110	cas9	-	-	L	ko:K09952	-	ko00000,ko01000,ko02048	CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
APMKGJCD_00991	1.13e-56	-	-	-	L	-	-	-	Cleaves both 3' and 5' ssDNA extremities of branched DNA structures
APMKGJCD_00992	3.93e-109	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
APMKGJCD_00993	0.0	XK27_00340	3.1.3.5	-	F	ko:K01081	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the 5'-nucleotidase family
APMKGJCD_00994	9.05e-88	-	-	-	-	-	-	-	-
APMKGJCD_00995	1.76e-33	-	-	-	S	-	-	-	CRISPR-associated protein (Cas_Csn2)
APMKGJCD_00996	1.04e-41	cas2	-	-	L	ko:K09951	-	ko00000,ko02048	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
APMKGJCD_00997	4.6e-118	cas1	-	-	L	ko:K15342	-	ko00000,ko02048,ko03400	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
APMKGJCD_00998	0.0	cas9	-	-	L	ko:K09952	-	ko00000,ko01000,ko02048	CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
APMKGJCD_00999	2.16e-45	yiaC	-	-	K	ko:K03826	-	ko00000,ko01000	Acetyltransferase (GNAT) domain
APMKGJCD_01000	5.56e-82	-	-	-	-	-	-	-	-
APMKGJCD_01001	9.99e-44	-	-	-	-	-	-	-	-
APMKGJCD_01002	5.79e-218	-	-	-	L	-	-	-	Initiator Replication protein
APMKGJCD_01003	2.14e-112	-	-	-	S	-	-	-	Protein of unknown function, DUF536
APMKGJCD_01004	1.15e-109	dps	-	-	P	ko:K04047	-	ko00000,ko03036	Belongs to the Dps family
APMKGJCD_01006	1.56e-58	-	-	-	S	-	-	-	Acetyltransferase (GNAT) domain
APMKGJCD_01007	2.59e-77	-	-	-	S	-	-	-	Bacterial toxin of type II toxin-antitoxin system, YafQ
APMKGJCD_01008	1.11e-59	-	-	-	D	ko:K19159	-	ko00000,ko02048	Antitoxin component of a toxin-antitoxin (TA) module
APMKGJCD_01009	2.18e-138	-	-	-	L	-	-	-	Integrase
APMKGJCD_01010	5.82e-10	hisK	3.1.3.15	-	E	ko:K04486	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Histidinol phosphatase and related hydrolases of the PHP family
APMKGJCD_01011	2.97e-110	-	-	-	K	-	-	-	FR47-like protein
APMKGJCD_01012	4.89e-63	-	-	-	-	-	-	-	-
APMKGJCD_01013	0.0	-	-	-	L	ko:K07487	-	ko00000	Transposase
APMKGJCD_01014	3.66e-253	dpnM	2.1.1.72	-	H	ko:K06223	ko03430,map03430	ko00000,ko00001,ko01000,ko02048,ko03032,ko03400	Site-specific DNA-methyltransferase (adenine-specific)
APMKGJCD_01015	1.35e-141	pcp	3.4.19.3	-	O	ko:K01304	-	ko00000,ko01000,ko01002	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
APMKGJCD_01016	0.0	lmrA	3.6.3.44	-	V	ko:K02021,ko:K18104	ko01501,ko02010,map01501,map02010	ko00000,ko00001,ko00002,ko01000,ko01504,ko02000	ABC transporter
APMKGJCD_01017	2.41e-124	-	-	-	K	-	-	-	Transcriptional regulator, MarR family
APMKGJCD_01018	1.56e-74	-	-	-	S	ko:K07090	-	ko00000	membrane transporter protein
APMKGJCD_01019	7.97e-247	aspS	6.1.1.12	-	J	ko:K01876	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
APMKGJCD_01020	1.29e-179	aspS	6.1.1.12	-	J	ko:K01876	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
APMKGJCD_01021	6.85e-315	hisS	6.1.1.21	-	J	ko:K01892	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	histidyl-tRNA synthetase
APMKGJCD_01022	9.84e-128	-	-	-	-	-	-	-	-
APMKGJCD_01023	3.46e-206	lytH	3.5.1.28	-	M	ko:K01448	ko01503,map01503	ko00000,ko00001,ko00002,ko01000,ko01011,ko03036	N-acetylmuramoyl-L-alanine amidase
APMKGJCD_01024	1.26e-209	-	-	-	G	-	-	-	Fructosamine kinase
APMKGJCD_01025	3.17e-149	-	-	-	S	-	-	-	HAD-hyrolase-like
APMKGJCD_01026	2.24e-98	dtd	-	-	J	ko:K07560	-	ko00000,ko01000,ko03016	rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
APMKGJCD_01027	0.0	relA	2.7.6.5	-	KT	ko:K00951	ko00230,map00230	ko00000,ko00001,ko01000	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
APMKGJCD_01028	9.64e-81	-	-	-	-	-	-	-	-
APMKGJCD_01029	7.68e-173	rsmE	2.1.1.193	-	J	ko:K09761	-	ko00000,ko01000,ko03009	Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
APMKGJCD_01030	7.74e-231	prmA	-	-	J	ko:K02687	-	ko00000,ko01000,ko03009	Ribosomal protein L11 methyltransferase
APMKGJCD_01031	1.79e-71	-	-	-	-	-	-	-	-
APMKGJCD_01032	7.94e-65	mscL	-	-	M	ko:K03282	-	ko00000,ko02000	Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
APMKGJCD_01033	8.28e-84	-	-	-	-	-	-	-	-
APMKGJCD_01035	7.67e-56	-	-	-	-	-	-	-	-
APMKGJCD_01037	2.82e-281	cfa	2.1.1.79	-	M	ko:K00574	-	ko00000,ko01000	cyclopropane-fatty-acyl-phospholipid synthase
APMKGJCD_01039	2.29e-12	-	-	-	-	-	-	-	-
APMKGJCD_01040	1.61e-70	asp2	-	-	S	-	-	-	Asp23 family, cell envelope-related function
APMKGJCD_01041	3.04e-86	-	-	-	S	-	-	-	Asp23 family, cell envelope-related function
APMKGJCD_01042	1.71e-33	-	-	-	-	-	-	-	-
APMKGJCD_01043	2.33e-92	-	-	-	-	-	-	-	-
APMKGJCD_01044	9.29e-40	-	-	-	S	-	-	-	Transglycosylase associated protein
APMKGJCD_01045	1.35e-239	lysA2	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
APMKGJCD_01048	5.49e-38	-	-	-	-	-	-	-	-
APMKGJCD_01055	4.63e-87	-	-	-	S	-	-	-	Baseplate J-like protein
APMKGJCD_01058	5.36e-38	-	-	-	-	-	-	-	-
APMKGJCD_01059	3.31e-10	-	-	-	-	-	-	-	-
APMKGJCD_01060	3.64e-38	-	-	-	M	-	-	-	LysM domain
APMKGJCD_01061	8.31e-179	-	-	-	M	-	-	-	tape measure
APMKGJCD_01062	2.07e-197	-	-	-	L	-	-	-	Phage tail tape measure protein TP901
APMKGJCD_01065	1.45e-30	-	-	-	-	-	-	-	-
APMKGJCD_01069	5.25e-37	-	-	-	-	-	-	-	-
APMKGJCD_01077	8.73e-63	-	-	-	S	-	-	-	Phage portal protein, SPP1 Gp6-like
APMKGJCD_01078	2.32e-166	-	-	-	S	-	-	-	Terminase RNaseH-like domain
APMKGJCD_01079	1.48e-43	-	-	-	S	-	-	-	DNA packaging
APMKGJCD_01090	6.79e-54	-	-	-	S	-	-	-	Endodeoxyribonuclease RusA
APMKGJCD_01091	2.08e-68	-	-	-	K	ko:K07741	-	ko00000	AntA/AntB antirepressor
APMKGJCD_01093	3.9e-104	pi112	-	-	L	-	-	-	PDDEXK-like domain of unknown function (DUF3799)
APMKGJCD_01094	2.39e-80	-	-	-	L	ko:K07455	-	ko00000,ko03400	RecT family
APMKGJCD_01104	3.01e-10	-	-	-	K	-	-	-	sequence-specific DNA binding
APMKGJCD_01105	6.61e-48	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
APMKGJCD_01106	1.13e-59	-	-	-	E	-	-	-	IrrE N-terminal-like domain
APMKGJCD_01108	5.07e-41	-	-	-	-	-	-	-	-
APMKGJCD_01109	4.22e-22	-	-	-	-	-	-	-	-
APMKGJCD_01110	3.62e-25	-	-	-	-	-	-	-	-
APMKGJCD_01112	2.95e-29	-	-	-	-	-	-	-	-
APMKGJCD_01113	3.33e-94	-	-	-	S	-	-	-	AAA ATPase domain
APMKGJCD_01114	2.74e-161	-	2.1.1.72	-	L	ko:K06223	ko03430,map03430	ko00000,ko00001,ko01000,ko02048,ko03032,ko03400	DNA methyltransferase
APMKGJCD_01117	7.44e-168	int7	-	-	L	-	-	-	Belongs to the 'phage' integrase family
APMKGJCD_01118	0.0	lepA	-	-	M	ko:K03596	ko05134,map05134	ko00000,ko00001	Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
APMKGJCD_01119	0.0	dltD	-	-	M	ko:K03740	ko01503,ko02020,ko05150,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01504	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
APMKGJCD_01120	1.02e-46	dltC	6.1.1.13	-	J	ko:K14188	ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01000,ko01504	Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
APMKGJCD_01121	8.72e-301	dltB	-	-	M	ko:K03739	ko01503,ko02020,ko05150,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01504	MBOAT, membrane-bound O-acyltransferase family
APMKGJCD_01122	0.0	dltA	6.1.1.13	-	H	ko:K03367	ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01000,ko01504	Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
APMKGJCD_01123	8.25e-25	dltX	-	-	S	-	-	-	D-Ala-teichoic acid biosynthesis protein
APMKGJCD_01124	2e-248	dnaJ	-	-	O	ko:K03686	-	ko00000,ko03029,ko03110	ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
APMKGJCD_01125	0.0	dnaK	-	-	O	ko:K04043	ko03018,ko04212,ko05152,map03018,map04212,map05152	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	Heat shock 70 kDa protein
APMKGJCD_01126	6.17e-124	grpE	-	-	O	ko:K03687	-	ko00000,ko03029,ko03110	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
APMKGJCD_01127	8.18e-243	hrcA	-	-	K	ko:K03705	-	ko00000,ko03000	Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
APMKGJCD_01128	1.02e-230	ribF	2.7.1.26, 2.7.7.2	-	H	ko:K11753	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Belongs to the ribF family
APMKGJCD_01129	2.19e-219	truB	5.4.99.25	-	J	ko:K03177,ko:K03483	-	ko00000,ko01000,ko03000,ko03016	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
APMKGJCD_01130	1.77e-74	rbfA	-	-	J	ko:K02834	-	ko00000,ko03009	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
APMKGJCD_01131	0.0	infB	-	-	J	ko:K02519	-	ko00000,ko03012,ko03029	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
APMKGJCD_01132	4.88e-60	ylxQ	-	-	J	-	-	-	ribosomal protein
APMKGJCD_01133	2.64e-63	ylxR	-	-	K	ko:K07742	-	ko00000	Protein of unknown function (DUF448)
APMKGJCD_01134	2.34e-252	nusA	-	-	K	ko:K02600	-	ko00000,ko03009,ko03021	Participates in both transcription termination and antitermination
APMKGJCD_01135	3.03e-106	rimP	-	-	J	ko:K09748	-	ko00000,ko03009	Required for maturation of 30S ribosomal subunits
APMKGJCD_01136	4.41e-52	-	-	-	-	-	-	-	-
APMKGJCD_01137	7.36e-61	polC	2.7.7.7	-	L	ko:K03763	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
APMKGJCD_01138	0.0	polC	2.7.7.7	-	L	ko:K03763	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
APMKGJCD_01139	0.0	proS	6.1.1.15	-	J	ko:K01881	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
APMKGJCD_01140	8.39e-297	rseP	-	-	M	ko:K11749	ko02024,ko04112,map02024,map04112	ko00000,ko00001,ko01000,ko01002	zinc metalloprotease
APMKGJCD_01141	6.8e-178	cdsA	2.7.7.41	-	I	ko:K00981	ko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070	ko00000,ko00001,ko00002,ko01000	Belongs to the CDS family
APMKGJCD_01142	6.92e-191	uppS	2.5.1.31	-	H	ko:K00806	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
APMKGJCD_01143	3.42e-97	-	-	-	-	-	-	-	-
APMKGJCD_01144	2.32e-110	frr	-	-	J	ko:K02838	-	ko00000,ko03012	Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
APMKGJCD_01145	2.12e-165	pyrH	2.7.4.22	-	F	ko:K09903	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphorylation of UMP to UDP
APMKGJCD_01146	2.79e-197	tsf	-	-	J	ko:K02357	-	ko00000,ko03012,ko03029	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
APMKGJCD_01147	9.38e-187	rpsB	-	-	J	ko:K02967	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uS2 family
APMKGJCD_01148	9.81e-175	-	-	-	S	ko:K07025	-	ko00000	Haloacid dehalogenase-like hydrolase
APMKGJCD_01149	7.5e-237	ldhD	1.1.1.28	-	CH	ko:K03778	ko00620,ko01120,map00620,map01120	ko00000,ko00001,ko01000	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
APMKGJCD_01150	3.01e-58	yazA	-	-	L	ko:K07461	-	ko00000	GIY-YIG catalytic domain protein
APMKGJCD_01151	1.02e-176	yabB	2.1.1.223	-	L	ko:K07461,ko:K15460	-	ko00000,ko01000,ko03016	Methyltransferase small domain
APMKGJCD_01152	3.58e-155	plsC	2.3.1.51	-	I	ko:K00655	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Acyltransferase
APMKGJCD_01153	0.0	mdlB	-	-	V	ko:K06147,ko:K18890	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
APMKGJCD_01154	0.0	mdlA	-	-	V	ko:K06148,ko:K18889	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
APMKGJCD_01155	1.61e-44	XK26_06720	-	-	S	ko:K09976	-	ko00000	Uncharacterised protein family (UPF0154)
APMKGJCD_01156	2.61e-49	ynzC	-	-	S	-	-	-	UPF0291 protein
APMKGJCD_01157	2.41e-142	lexA	3.4.21.88	-	K	ko:K01356	-	ko00000,ko00002,ko01000,ko01002,ko03400	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
APMKGJCD_01158	1.66e-100	-	-	-	F	-	-	-	nucleoside 2-deoxyribosyltransferase
APMKGJCD_01159	1.12e-109	-	-	-	-	-	-	-	-
APMKGJCD_01160	7.73e-277	mvaS	2.3.3.10	-	I	ko:K01641	ko00072,ko00280,ko00650,ko00900,ko01100,ko01110,ko01130,map00072,map00280,map00650,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Hydroxymethylglutaryl-CoA synthase
APMKGJCD_01161	1.26e-213	-	-	-	S	-	-	-	Polyphosphate nucleotide phosphotransferase, PPK2 family
APMKGJCD_01162	1.63e-159	pgm3	-	-	G	-	-	-	phosphoglycerate mutase
APMKGJCD_01163	2.94e-34	pspC	-	-	KT	ko:K03973	-	ko00000,ko02048,ko03000	PspC domain
APMKGJCD_01164	5.07e-108	ndk	2.7.4.6	-	F	ko:K00940	ko00230,ko00240,ko00983,ko01100,ko01110,ko01130,ko04016,map00230,map00240,map00983,map01100,map01110,map01130,map04016	ko00000,ko00001,ko00002,ko01000,ko04131	Belongs to the NDK family
APMKGJCD_01170	1.42e-50	-	-	-	M	-	-	-	hydrolase, family 25
APMKGJCD_01173	1.36e-30	-	-	-	S	-	-	-	Phage minor structural protein
APMKGJCD_01175	2.15e-12	-	-	-	S	-	-	-	Phage tail protein
APMKGJCD_01176	1.84e-167	-	-	-	D	-	-	-	domain protein
APMKGJCD_01180	9.27e-39	-	-	-	S	-	-	-	exonuclease activity
APMKGJCD_01183	3.89e-112	-	-	-	S	-	-	-	Phage capsid family
APMKGJCD_01184	1.83e-65	-	-	-	S	-	-	-	Clp protease
APMKGJCD_01185	6.42e-78	-	-	-	S	-	-	-	Phage portal protein
APMKGJCD_01187	2.26e-226	-	-	-	S	-	-	-	Phage Terminase
APMKGJCD_01188	8.92e-47	-	-	-	L	-	-	-	Phage terminase, small subunit
APMKGJCD_01190	1.83e-10	-	-	-	S	-	-	-	Transcriptional regulator, RinA family
APMKGJCD_01191	6.02e-54	-	-	-	S	-	-	-	HicB_like antitoxin of bacterial toxin-antitoxin system
APMKGJCD_01192	1.2e-14	-	-	-	N	-	-	-	HicA toxin of bacterial toxin-antitoxin,
APMKGJCD_01193	1.69e-31	-	-	-	-	-	-	-	-
APMKGJCD_01195	4.11e-50	-	-	-	S	-	-	-	VRR_NUC
APMKGJCD_01196	2.15e-165	-	-	-	S	ko:K06919	-	ko00000	Virulence-associated protein E
APMKGJCD_01197	4.16e-102	-	-	-	L	-	-	-	Bifunctional DNA primase/polymerase, N-terminal
APMKGJCD_01199	6.9e-96	-	-	-	L	-	-	-	AAA domain
APMKGJCD_01200	4.88e-210	-	-	-	L	-	-	-	Helicase C-terminal domain protein
APMKGJCD_01201	5.31e-63	-	-	-	S	-	-	-	Siphovirus Gp157
APMKGJCD_01206	1.79e-36	-	-	-	-	-	-	-	-
APMKGJCD_01208	5.14e-23	-	-	-	-	-	-	-	-
APMKGJCD_01209	8.23e-16	-	-	-	S	-	-	-	YozE SAM-like fold
APMKGJCD_01212	1.93e-45	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
APMKGJCD_01213	4.04e-64	-	-	-	E	-	-	-	IrrE N-terminal-like domain
APMKGJCD_01215	7.01e-171	dcm	2.1.1.37	-	L	ko:K00558	ko00270,ko01100,ko05206,map00270,map01100,map05206	ko00000,ko00001,ko00002,ko01000,ko02048,ko03032,ko03036	Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family
APMKGJCD_01216	1.12e-121	-	-	-	S	-	-	-	Protein of unknown function DUF262
APMKGJCD_01217	4.17e-31	-	-	-	-	-	-	-	-
APMKGJCD_01218	7.89e-79	int3	-	-	L	-	-	-	Belongs to the 'phage' integrase family
APMKGJCD_01220	4.78e-91	-	-	-	S	-	-	-	TIR domain
APMKGJCD_01221	1.12e-213	-	-	-	I	-	-	-	Diacylglycerol kinase catalytic domain
APMKGJCD_01222	5.89e-98	-	-	-	-	-	-	-	-
APMKGJCD_01223	6.11e-11	-	-	-	K	-	-	-	CsbD-like
APMKGJCD_01224	7.24e-102	-	-	-	T	-	-	-	Universal stress protein family
APMKGJCD_01225	3.06e-120	apt	2.4.2.7	-	F	ko:K00759	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000,ko04147	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
APMKGJCD_01226	0.0	recJ	-	-	L	ko:K07462	ko03410,ko03430,ko03440,map03410,map03430,map03440	ko00000,ko00001,ko01000,ko03400	Single-stranded-DNA-specific exonuclease RecJ
APMKGJCD_01227	4.43e-72	yrvD	-	-	S	-	-	-	Pfam:DUF1049
APMKGJCD_01228	1.19e-230	rnz	3.1.26.11	-	J	ko:K00784	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
APMKGJCD_01229	1.36e-37	-	-	-	-	-	-	-	-
APMKGJCD_01230	6.61e-74	-	-	-	-	-	-	-	-
APMKGJCD_01231	4.94e-70	-	-	-	-	-	-	-	-
APMKGJCD_01232	2.81e-314	obg	-	-	S	ko:K03979	-	ko00000,ko01000,ko03009	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
APMKGJCD_01233	0.0	uvrC	-	-	L	ko:K03703	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
APMKGJCD_01234	1.21e-22	-	-	-	-	-	-	-	-
APMKGJCD_01235	4.51e-69	-	-	-	S	-	-	-	mazG nucleotide pyrophosphohydrolase
APMKGJCD_01236	3.22e-141	engB	-	-	D	ko:K03978	-	ko00000,ko03036	Necessary for normal cell division and for the maintenance of normal septation
APMKGJCD_01237	5.91e-298	clpX	-	-	O	ko:K03544	ko04112,map04112	ko00000,ko00001,ko03110	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
APMKGJCD_01238	1.02e-298	tig	-	-	D	ko:K03545	-	ko00000	Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
APMKGJCD_01239	9.97e-288	tuf	-	-	J	ko:K02358,ko:K15771	ko02010,map02010	ko00000,ko00001,ko00002,ko02000,ko03012,ko03029,ko04147	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
APMKGJCD_01240	2.17e-213	-	-	-	S	-	-	-	Tetratricopeptide repeat
APMKGJCD_01241	0.0	rnjB	-	-	J	ko:K12574	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
APMKGJCD_01242	2.9e-56	rpsO	-	-	J	ko:K02956	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
APMKGJCD_01243	8e-45	rpsT	-	-	J	ko:K02968	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 16S ribosomal RNA
APMKGJCD_01244	1.99e-237	holA	2.7.7.7	-	L	ko:K02340	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III delta subunit
APMKGJCD_01245	0.0	comEC	-	-	S	ko:K02238	-	ko00000,ko00002,ko02044	Competence protein ComEC
APMKGJCD_01246	7.41e-117	comEB	3.5.4.12	-	F	ko:K01493	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko02044	ComE operon protein 2
APMKGJCD_01247	1.43e-154	comEA	-	-	L	ko:K02237	-	ko00000,ko00002,ko02044	Competence protein ComEA
APMKGJCD_01248	1.18e-253	lon	-	-	T	ko:K07177	ko02024,map02024	ko00000,ko00001,ko01002	Belongs to the peptidase S16 family
APMKGJCD_01249	1.05e-108	coaD	2.7.7.3	-	H	ko:K00954	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
APMKGJCD_01250	6.8e-129	rsmD	2.1.1.171	-	L	ko:K08316	-	ko00000,ko01000,ko03009	RNA methyltransferase, RsmD family
APMKGJCD_01251	1.33e-57	ylbG	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2129)
APMKGJCD_01252	3.1e-269	ftsW	-	-	D	ko:K03588	ko04112,map04112	ko00000,ko00001,ko02000,ko03036	Belongs to the SEDS family
APMKGJCD_01253	0.0	typA	-	-	T	ko:K06207	-	ko00000	GTP-binding protein TypA
APMKGJCD_01254	1.33e-184	suhB	3.1.3.25	-	G	ko:K01092	ko00521,ko00562,ko01100,ko04070,map00521,map00562,map01100,map04070	ko00000,ko00001,ko00002,ko01000	Belongs to the inositol monophosphatase superfamily
APMKGJCD_01255	7.2e-61	yktA	-	-	S	-	-	-	Belongs to the UPF0223 family
APMKGJCD_01256	1.16e-209	-	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	L-malate dehydrogenase activity
APMKGJCD_01257	0.0	pdhD	1.8.1.4	-	C	ko:K00382	ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000,ko04147	Dehydrogenase
APMKGJCD_01258	1.21e-287	pdhC	2.3.1.12	-	C	ko:K00627	ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
APMKGJCD_01259	1.15e-232	pdhB	1.2.4.1	-	C	ko:K00162	ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04922,ko05230,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200,map04066,map04922,map05230	br01601,ko00000,ko00001,ko00002,ko01000	Transketolase, C-terminal domain protein
APMKGJCD_01260	4.77e-271	pdhA	1.2.4.1	-	C	ko:K00161	ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04922,ko05230,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200,map04066,map04922,map05230	br01601,ko00000,ko00001,ko00002,ko01000	Dehydrogenase E1 component
APMKGJCD_01261	9.7e-133	def	3.5.1.88	-	J	ko:K01462	-	ko00000,ko01000	Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
APMKGJCD_01262	9.18e-105	-	-	-	-	-	-	-	-
APMKGJCD_01263	9.82e-45	ykzG	-	-	S	-	-	-	Belongs to the UPF0356 family
APMKGJCD_01264	0.0	rnjA	-	-	J	ko:K12574	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
APMKGJCD_01265	2.84e-239	-	-	-	I	-	-	-	Diacylglycerol kinase catalytic
APMKGJCD_01266	6.66e-39	-	-	-	-	-	-	-	-
APMKGJCD_01267	8.77e-210	-	-	-	M	ko:K21471	-	ko00000,ko01000,ko01002,ko01011	NlpC P60 family protein
APMKGJCD_01268	4.06e-220	ypuA	-	-	S	-	-	-	Protein of unknown function (DUF1002)
APMKGJCD_01269	4.08e-216	ykfC	3.4.14.13	-	M	ko:K20742	-	ko00000,ko01000,ko01002	NlpC/P60 family
APMKGJCD_01270	0.0	tkt2	2.2.1.1	-	H	ko:K00615	ko00030,ko00710,ko01051,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01051,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
APMKGJCD_01271	3.56e-206	rbsK	2.7.1.15	-	H	ko:K00852	ko00030,map00030	ko00000,ko00001,ko01000	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
APMKGJCD_01272	8.04e-237	-	-	-	K	ko:K02529	-	ko00000,ko03000	helix_turn _helix lactose operon repressor
APMKGJCD_01273	2.74e-242	yghZ	-	-	C	ko:K19265	-	ko00000,ko01000	Aldo keto reductase family protein
APMKGJCD_01274	5.89e-203	murQ	4.2.1.126	-	G	ko:K07106	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
APMKGJCD_01275	0.0	oppA	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
APMKGJCD_01276	0.0	nylA	3.5.1.4	-	J	ko:K01426	ko00330,ko00360,ko00380,ko00627,ko00643,ko01120,map00330,map00360,map00380,map00627,map00643,map01120	ko00000,ko00001,ko01000	Belongs to the amidase family
APMKGJCD_01277	1.99e-205	yckB	-	-	ET	ko:K02030,ko:K02424	ko02010,map02010	ko00000,ko00001,ko00002,ko02000,ko02035	Belongs to the bacterial solute-binding protein 3 family
APMKGJCD_01278	6.33e-157	yckA	-	-	E	ko:K10009	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
APMKGJCD_01279	3.99e-165	-	-	-	S	-	-	-	Protein of unknown function (DUF1275)
APMKGJCD_01280	4.45e-227	prs2	2.7.6.1	-	F	ko:K00948	ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
APMKGJCD_01281	0.0	recD2	3.1.11.5	-	L	ko:K03581	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
APMKGJCD_01282	1.88e-152	-	-	-	S	-	-	-	repeat protein
APMKGJCD_01283	9.09e-156	pgm6	-	-	G	-	-	-	phosphoglycerate mutase
APMKGJCD_01284	1.09e-283	mnmA	2.8.1.13	-	J	ko:K00566	ko04122,map04122	ko00000,ko00001,ko01000,ko03016	Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
APMKGJCD_01285	1.79e-77	XK27_04120	-	-	S	-	-	-	Putative amino acid metabolism
APMKGJCD_01286	2.86e-288	iscS	2.8.1.7	-	E	ko:K04487	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko02048,ko03016,ko03029	Aminotransferase class V
APMKGJCD_01287	3.68e-161	mtnN	3.2.2.9	-	E	ko:K01243	ko00270,ko01100,ko01230,map00270,map01100,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
APMKGJCD_01288	1.36e-47	-	-	-	-	-	-	-	-
APMKGJCD_01289	2.49e-123	nudF	3.6.1.13	-	L	ko:K01515	ko00230,map00230	ko00000,ko00001,ko01000	ADP-ribose pyrophosphatase
APMKGJCD_01290	4.08e-47	cspB	-	-	K	ko:K03704	-	ko00000,ko03000	Cold shock protein
APMKGJCD_01291	0.0	ileS	6.1.1.5	-	J	ko:K01870	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
APMKGJCD_01292	3.87e-134	divIVA	-	-	D	ko:K04074	-	ko00000,ko03036	DivIVA domain protein
APMKGJCD_01293	7.18e-187	ylmH	-	-	S	-	-	-	S4 domain protein
APMKGJCD_01294	3.42e-55	ylmG	-	-	S	ko:K02221	-	ko00000,ko02044	YGGT family
APMKGJCD_01295	2.58e-98	sepF	-	-	D	ko:K09772	-	ko00000,ko03036	Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
APMKGJCD_01296	1.48e-287	ftsZ	-	-	D	ko:K03531	ko04112,map04112	ko00000,ko00001,ko02048,ko03036,ko04812	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
APMKGJCD_01297	7.41e-311	ftsA	-	-	D	ko:K03590	ko04112,map04112	ko00000,ko00001,ko03036,ko04812	Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
APMKGJCD_01298	9.4e-198	divIB	-	-	D	ko:K03589	ko04112,map04112	ko00000,ko00001,ko03036	Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
APMKGJCD_01299	2.92e-257	murG	2.4.1.227	GT28	M	ko:K02563	ko00550,ko01100,ko01502,ko04112,map00550,map01100,map01502,map04112	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
APMKGJCD_01300	0.0	murD	6.3.2.9	-	M	ko:K01925	ko00471,ko00550,ko01100,map00471,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
APMKGJCD_01301	3.06e-236	mraY	2.7.8.13	-	M	ko:K01000	ko00550,ko01100,ko01502,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
APMKGJCD_01302	0.0	pbpX	-	-	M	ko:K08724,ko:K12552,ko:K12556	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01011	Penicillin-binding Protein
APMKGJCD_01303	7.35e-81	ftsL	-	-	D	-	-	-	Cell division protein FtsL
APMKGJCD_01304	1.23e-226	rsmH	2.1.1.199	-	J	ko:K03438	-	ko00000,ko01000,ko03009	Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
APMKGJCD_01305	1.38e-102	mraZ	-	-	K	ko:K03925	-	ko00000	Belongs to the MraZ family
APMKGJCD_01306	8.72e-80	-	-	-	S	-	-	-	Protein of unknown function (DUF3397)
APMKGJCD_01307	4.92e-18	-	-	-	S	-	-	-	Protein of unknown function (DUF4044)
APMKGJCD_01308	0.0	ftsK	-	-	D	ko:K03466	-	ko00000,ko03036	Belongs to the FtsK SpoIIIE SftA family
APMKGJCD_01309	1.72e-125	cspR	2.1.1.207	-	J	ko:K03216	-	ko00000,ko01000,ko03016	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
APMKGJCD_01310	3.2e-207	rrmA	2.1.1.187	-	H	ko:K00563,ko:K10947	-	ko00000,ko01000,ko03000,ko03009	Methyltransferase
APMKGJCD_01311	1.84e-262	XK27_05220	-	-	S	-	-	-	AI-2E family transporter
APMKGJCD_01312	3.71e-139	cutC	-	-	P	ko:K06201	-	ko00000	Participates in the control of copper homeostasis
APMKGJCD_01313	4.02e-19	-	2.4.1.52	GT4	M	ko:K00712	-	ko00000,ko01000,ko01003	Glycosyl transferases group 1
APMKGJCD_01314	0.0	tagE3	2.4.1.52	GT4	M	ko:K00712	-	ko00000,ko01000,ko01003	Glycosyl transferases group 1
APMKGJCD_01315	0.0	tagE2	2.4.1.52	GT4	M	ko:K00712	-	ko00000,ko01000,ko01003	Glycosyl transferases group 1
APMKGJCD_01316	1.11e-37	-	-	-	-	-	-	-	-
APMKGJCD_01317	2.22e-83	-	-	-	S	-	-	-	Pfam Methyltransferase
APMKGJCD_01318	2.97e-79	-	-	-	M	-	-	-	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
APMKGJCD_01319	1.23e-34	-	-	-	S	-	-	-	Pfam Methyltransferase
APMKGJCD_01320	4.63e-62	-	-	-	S	-	-	-	Pfam Methyltransferase
APMKGJCD_01321	7.1e-223	yjbO	5.4.99.23	-	G	ko:K06180	-	ko00000,ko01000,ko03009	Responsible for synthesis of pseudouridine from uracil
APMKGJCD_01322	1.29e-193	nadK	2.7.1.23	-	F	ko:K00858	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
APMKGJCD_01323	9.43e-154	yjbM	2.7.6.5	-	S	ko:K07816	ko00230,map00230	ko00000,ko00001,ko01000	RelA SpoT domain protein
APMKGJCD_01324	1.7e-148	yjbH	-	-	Q	-	-	-	Thioredoxin
APMKGJCD_01325	3.19e-204	degV1	-	-	S	-	-	-	DegV family
APMKGJCD_01326	0.0	pepF	-	-	E	ko:K08602	-	ko00000,ko01000,ko01002	oligoendopeptidase F
APMKGJCD_01327	3.22e-270	coiA	-	-	S	ko:K06198	-	ko00000	Competence protein
APMKGJCD_01328	7.82e-160	trmB	2.1.1.33	-	J	ko:K03439	-	ko00000,ko01000,ko03016	Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
APMKGJCD_01329	7.79e-193	ytmP	-	-	M	-	-	-	Choline/ethanolamine kinase
APMKGJCD_01330	5.74e-284	ecsB	-	-	U	ko:K01992	-	ko00000,ko00002,ko02000	ABC transporter
APMKGJCD_01331	2.85e-173	ecsA	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
APMKGJCD_01332	5.29e-109	hit	-	-	FG	ko:K02503	-	ko00000,ko04147	histidine triad
APMKGJCD_01333	1.78e-67	-	-	-	-	-	-	-	-
APMKGJCD_01334	8.85e-195	prsA	5.2.1.8	-	M	ko:K07533	-	ko00000,ko01000,ko03110	Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
APMKGJCD_01335	4.89e-238	yhaM	-	-	S	ko:K03698	-	ko00000,ko01000,ko03019	Metal dependent phosphohydrolases with conserved 'HD' motif.
APMKGJCD_01336	0.0	yhaN	-	-	L	-	-	-	AAA domain
APMKGJCD_01337	2.3e-297	yhaO	-	-	L	ko:K03547	-	ko00000,ko03400	Ser Thr phosphatase family protein
APMKGJCD_01338	2.44e-71	yheA	-	-	S	-	-	-	Belongs to the UPF0342 family
APMKGJCD_01339	0.0	pbp2A	2.4.1.129, 3.4.16.4	GT51	M	ko:K12555	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01003,ko01011	penicillin-binding protein
APMKGJCD_01340	4.85e-102	argR	-	-	K	ko:K03402	-	ko00000,ko03000	Regulates arginine biosynthesis genes
APMKGJCD_01341	0.0	argS	6.1.1.19	-	J	ko:K01887	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Arginyl-tRNA synthetase
APMKGJCD_01343	3.49e-24	-	-	-	-	-	-	-	-
APMKGJCD_01344	1.53e-305	-	3.2.1.96, 3.5.1.28	GH73	M	ko:K01227,ko:K01447,ko:K13714,ko:K13731	ko00511,ko05100,map00511,map05100	ko00000,ko00001,ko01000	N-acetylmuramoyl-L-alanine amidase
APMKGJCD_01345	2.14e-127	ywjB	-	-	H	-	-	-	RibD C-terminal domain
APMKGJCD_01346	4.57e-71	-	-	-	S	-	-	-	Protein of unknown function (DUF1516)
APMKGJCD_01347	3.16e-170	racX	5.1.1.13	-	M	ko:K01779	ko00250,ko01054,map00250,map01054	ko00000,ko00001,ko01000	Belongs to the aspartate glutamate racemases family
APMKGJCD_01348	0.0	yxbA	6.3.1.12	-	S	ko:K17810	-	ko00000,ko01000	ATP-grasp enzyme
APMKGJCD_01349	0.0	asnB	6.3.5.4	-	E	ko:K01953	ko00250,ko01100,ko01110,map00250,map01100,map01110	ko00000,ko00001,ko01000,ko01002	Asparagine synthase
APMKGJCD_01350	2.01e-141	rcfA	-	-	K	ko:K21562	-	ko00000,ko03000	Transcriptional regulator, Crp Fnr family
APMKGJCD_01351	0.0	-	-	-	E	-	-	-	Peptidase family C69
APMKGJCD_01352	1.18e-50	-	-	-	-	-	-	-	-
APMKGJCD_01353	0.0	-	-	-	-	-	-	-	-
APMKGJCD_01356	0.0	-	-	-	L	ko:K03701	ko03420,map03420	ko00000,ko00001,ko03400	ABC transporter
APMKGJCD_01357	7.31e-110	-	-	-	L	ko:K07497	-	ko00000	PFAM Integrase catalytic region
APMKGJCD_01358	4.6e-229	-	-	-	M	-	-	-	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
APMKGJCD_01359	2.16e-82	-	-	-	K	-	-	-	helix_turn_helix multiple antibiotic resistance protein
APMKGJCD_01361	1.56e-211	cps1C	-	-	S	ko:K03328	-	ko00000	Membrane protein involved in the export of O-antigen and teichoic acid
APMKGJCD_01363	2.45e-68	repA	-	-	S	-	-	-	Replication initiator protein A
APMKGJCD_01364	2.79e-224	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
APMKGJCD_01365	8.84e-305	tyrS	6.1.1.1	-	J	ko:K01866	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
APMKGJCD_01366	2.55e-304	mntH	-	-	P	ko:K03322	-	ko00000,ko02000	H( )-stimulated, divalent metal cation uptake system
APMKGJCD_01367	2.97e-41	-	-	-	-	-	-	-	-
APMKGJCD_01368	1.66e-75	-	-	-	K	-	-	-	Winged helix DNA-binding domain
APMKGJCD_01369	0.0	-	-	-	S	ko:K13730	ko05100,map05100	ko00000,ko00001	Uncharacterized protein conserved in bacteria (DUF2252)
APMKGJCD_01370	0.0	-	-	-	K	-	-	-	Mga helix-turn-helix domain
APMKGJCD_01371	2.65e-48	-	-	-	-	-	-	-	-
APMKGJCD_01372	0.0	-	-	-	U	ko:K03457	-	ko00000	Belongs to the purine-cytosine permease (2.A.39) family
APMKGJCD_01373	1e-101	-	2.4.2.6	-	F	ko:K08728	ko00240,map00240	ko00000,ko00001,ko01000	Nucleoside 2-deoxyribosyltransferase
APMKGJCD_01374	7.7e-110	ydbS	-	-	S	ko:K09167	-	ko00000	Bacterial PH domain
APMKGJCD_01375	0.0	ydbT	-	-	S	ko:K08981	-	ko00000	Bacterial PH domain
APMKGJCD_01376	1.03e-264	glxK	2.7.1.165	-	G	ko:K00865	ko00260,ko00561,ko00630,ko01100,ko01120,ko01130,map00260,map00561,map00630,map01100,map01120,map01130	ko00000,ko00001,ko01000	Belongs to the glycerate kinase type-1 family
APMKGJCD_01377	6.98e-273	yojA	-	-	EG	ko:K03299	-	ko00000,ko02000	GntP family permease
APMKGJCD_01378	5.8e-248	-	-	-	KT	ko:K02647	-	ko00000,ko03000	Putative sugar diacid recognition
APMKGJCD_01379	1.23e-225	-	-	-	-	ko:K16919	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	-
APMKGJCD_01380	6.18e-207	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
APMKGJCD_01381	2.63e-82	ytrA	-	-	K	ko:K07979	-	ko00000,ko03000	helix_turn_helix gluconate operon transcriptional repressor
APMKGJCD_01382	2.29e-164	-	-	-	S	-	-	-	Protein of unknown function (DUF975)
APMKGJCD_01383	4.86e-174	-	-	-	S	-	-	-	B3/4 domain
APMKGJCD_01384	0.0	-	2.8.2.22	-	M	ko:K01023	-	ko00000,ko01000	Arylsulfotransferase Ig-like domain
APMKGJCD_01385	7.27e-42	-	-	-	-	-	-	-	-
APMKGJCD_01386	3.04e-231	iunH5	3.2.2.1	-	F	ko:K01239	ko00230,ko00760,ko01100,map00230,map00760,map01100	ko00000,ko00001,ko01000	inosine-uridine preferring nucleoside hydrolase
APMKGJCD_01387	3.59e-212	oroP	-	-	S	ko:K09936	ko02024,map02024	ko00000,ko00001,ko02000	Putative inner membrane exporter, YdcZ
APMKGJCD_01388	0.0	ykpA	-	-	S	-	-	-	ABC transporter, ATP-binding protein
APMKGJCD_01389	2.83e-202	-	-	-	K	-	-	-	helix_turn_helix, arabinose operon control protein
APMKGJCD_01390	1.31e-267	blt	-	-	EGP	ko:K08153	-	ko00000,ko00002,ko02000	transporter
APMKGJCD_01391	1.49e-197	-	-	-	K	-	-	-	LysR substrate binding domain
APMKGJCD_01392	1.35e-208	-	-	-	S	-	-	-	Conserved hypothetical protein 698
APMKGJCD_01393	2.63e-128	cadD	-	-	P	-	-	-	Cadmium resistance transporter
APMKGJCD_01394	1e-69	czrA	-	-	K	ko:K22043	-	ko00000,ko03000	Transcriptional regulator, ArsR family
APMKGJCD_01395	0.0	sufI	-	-	Q	-	-	-	Multicopper oxidase
APMKGJCD_01396	3.01e-154	-	-	-	S	-	-	-	SNARE associated Golgi protein
APMKGJCD_01397	0.0	cadA	-	-	P	-	-	-	P-type ATPase
APMKGJCD_01398	4.45e-269	-	-	-	M	-	-	-	Collagen binding domain
APMKGJCD_01399	4.75e-92	-	-	-	S	-	-	-	Iron-sulphur cluster biosynthesis
APMKGJCD_01400	2.35e-80	-	-	-	K	-	-	-	Transcriptional regulator, GntR family
APMKGJCD_01401	0.0	-	-	-	Q	ko:K02004	-	ko00000,ko00002,ko02000	FtsX-like permease family
APMKGJCD_01402	1.14e-175	cysA	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
APMKGJCD_01403	3.04e-233	ydhF	-	-	S	-	-	-	Aldo keto reductase
APMKGJCD_01404	1.07e-264	ytbD	-	-	EGP	ko:K19577	-	ko00000,ko02000	Major Facilitator
APMKGJCD_01405	3.95e-82	ytcD	-	-	K	-	-	-	Transcriptional regulator, HxlR family
APMKGJCD_01406	5.59e-221	-	-	-	-	-	-	-	-
APMKGJCD_01407	0.0	tagB	2.7.8.12	-	M	ko:K09809	-	ko00000,ko01000	glycerophosphotransferase
APMKGJCD_01408	3.78e-95	-	-	-	K	-	-	-	Transcriptional regulator
APMKGJCD_01409	6.61e-196	-	-	-	GM	-	-	-	NmrA-like family
APMKGJCD_01410	3.5e-171	fabG1	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
APMKGJCD_01411	1.09e-160	-	-	-	IQ	-	-	-	Enoyl-(Acyl carrier protein) reductase
APMKGJCD_01412	1.2e-65	-	-	-	S	ko:K07090	-	ko00000	membrane transporter protein
APMKGJCD_01413	5.88e-89	-	-	-	S	ko:K07090	-	ko00000	membrane transporter protein
APMKGJCD_01414	2.06e-75	-	-	-	E	-	-	-	dipeptidase activity
APMKGJCD_01415	8.86e-303	-	-	-	E	-	-	-	dipeptidase activity
APMKGJCD_01416	7.16e-40	-	-	-	K	-	-	-	acetyltransferase
APMKGJCD_01417	2.14e-60	-	-	-	K	-	-	-	acetyltransferase
APMKGJCD_01418	1.5e-183	lytE	-	-	M	-	-	-	NlpC/P60 family
APMKGJCD_01419	2.3e-96	-	-	-	P	-	-	-	ArsC family
APMKGJCD_01420	6.73e-316	-	-	-	M	-	-	-	Parallel beta-helix repeats
APMKGJCD_01421	1.7e-84	-	-	-	K	-	-	-	MarR family
APMKGJCD_01422	1.91e-193	-	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
APMKGJCD_01423	9.16e-202	-	-	-	S	-	-	-	Alpha/beta hydrolase of unknown function (DUF915)
APMKGJCD_01424	6.8e-193	galM1	5.1.3.3	-	G	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the interconversion of alpha and beta anomers of maltose
APMKGJCD_01425	5.85e-56	rpsN	-	-	J	ko:K02954	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
APMKGJCD_01426	3.64e-99	-	-	-	-	-	-	-	-
APMKGJCD_01427	0.0	mapA	2.4.1.8	GH65	G	ko:K00691	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	hydrolase, family 65, central catalytic
APMKGJCD_01428	0.0	malT	-	-	G	ko:K16211	-	ko00000,ko02000	Major Facilitator
APMKGJCD_01429	2.31e-230	malR1	-	-	K	ko:K02529	-	ko00000,ko03000	Transcriptional regulator, LacI family
APMKGJCD_01430	9.7e-309	ciaH	2.7.13.3	-	T	ko:K14982	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	His Kinase A (phosphoacceptor) domain
APMKGJCD_01431	4.29e-160	ciaR	-	-	K	ko:K14983	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko02022	cheY-homologous receiver domain
APMKGJCD_01432	0.0	-	-	-	S	-	-	-	membrane
APMKGJCD_01434	2.46e-229	napA	-	-	P	-	-	-	Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
APMKGJCD_01435	2.36e-38	-	-	-	S	-	-	-	Protein of unknown function (DUF2929)
APMKGJCD_01436	2.11e-68	ywaC	2.7.6.5	-	S	ko:K00951,ko:K07816	ko00230,map00230	ko00000,ko00001,ko01000	RelA SpoT domain protein
APMKGJCD_01437	9.9e-22	-	-	-	T	-	-	-	Region found in RelA / SpoT proteins
APMKGJCD_01438	1.56e-294	mdtG	-	-	EGP	ko:K08161	-	ko00000,ko02000	Transporter, major facilitator family protein
APMKGJCD_01439	7.15e-179	-	-	-	IQ	-	-	-	Oxidoreductase, short chain dehydrogenase reductase family protein
APMKGJCD_01440	2.07e-75	-	-	-	S	-	-	-	Protein of unknown function (DUF1634)
APMKGJCD_01441	6.5e-185	-	-	-	S	ko:K07090	-	ko00000	membrane transporter protein
APMKGJCD_01442	4.53e-203	lysR5	-	-	K	-	-	-	LysR substrate binding domain
APMKGJCD_01443	1.08e-216	-	-	-	S	-	-	-	Alpha/beta hydrolase of unknown function (DUF915)
APMKGJCD_01444	0.0	pts14C	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
APMKGJCD_01445	4.43e-208	-	-	-	-	-	-	-	-
APMKGJCD_01446	1.44e-113	luxS	4.4.1.21	-	H	ko:K07173	ko00270,ko01100,ko01230,ko02024,ko02026,ko05111,map00270,map01100,map01230,map02024,map02026,map05111	ko00000,ko00001,ko00002,ko01000	Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
APMKGJCD_01447	9.97e-211	-	-	-	I	-	-	-	Carboxylesterase family
APMKGJCD_01448	8.33e-193	-	-	-	-	-	-	-	-
APMKGJCD_01449	2.22e-78	crcB	-	-	U	ko:K06199	-	ko00000,ko02000	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
APMKGJCD_01450	3.13e-86	crcB1	-	-	U	ko:K06199	-	ko00000,ko02000	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
APMKGJCD_01451	2.72e-51	yrkD	-	-	S	-	-	-	Metal-sensitive transcriptional repressor
APMKGJCD_01452	6.89e-75	trxA	-	-	O	ko:K03671	ko04621,ko05418,map04621,map05418	ko00000,ko00001,ko03110	Belongs to the thioredoxin family
APMKGJCD_01453	0.0	nox	-	-	C	-	-	-	NADH oxidase
APMKGJCD_01454	1.1e-198	degV	-	-	S	-	-	-	Uncharacterised protein, DegV family COG1307
APMKGJCD_01455	1.8e-306	mntH	-	-	P	ko:K03322	-	ko00000,ko02000	H( )-stimulated, divalent metal cation uptake system
APMKGJCD_01456	3.62e-166	-	1.1.1.53	-	IQ	ko:K00038	ko00140,ko01100,map00140,map01100	ko00000,ko00001,ko01000	reductase
APMKGJCD_01457	2.71e-103	eda	4.1.2.14, 4.1.3.42	-	G	ko:K01625	ko00030,ko00630,ko01100,ko01120,ko01200,map00030,map00630,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	KDPG and KHG aldolase
APMKGJCD_01458	7.91e-140	kdgK	2.7.1.45	-	G	ko:K00874	ko00030,ko01100,ko01120,ko01200,map00030,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	pfkB family carbohydrate kinase
APMKGJCD_01459	2.12e-162	kdgT	-	-	P	ko:K02526	-	ko00000,ko02000	2-keto-3-deoxygluconate permease
APMKGJCD_01460	5.12e-177	kduD	1.1.1.127	-	IQ	ko:K00065	ko00040,map00040	ko00000,ko00001,ko01000	Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
APMKGJCD_01461	1.6e-185	kduI	5.3.1.17	-	G	ko:K01815	ko00040,map00040	ko00000,ko00001,ko01000	Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
APMKGJCD_01462	3.4e-07	-	-	-	-	-	-	-	-
APMKGJCD_01463	2.32e-64	-	-	-	G	-	-	-	Xylose isomerase domain protein TIM barrel
APMKGJCD_01464	1.36e-128	-	-	-	K	-	-	-	Bacterial transcriptional regulator
APMKGJCD_01465	0.0	gabD	1.2.1.16, 1.2.1.20, 1.2.1.79	-	C	ko:K00135	ko00250,ko00310,ko00350,ko00650,ko00760,ko01100,ko01120,map00250,map00310,map00350,map00650,map00760,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Belongs to the aldehyde dehydrogenase family
APMKGJCD_01466	7.64e-131	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
APMKGJCD_01467	2.62e-121	ogt	2.1.1.63	-	L	ko:K00567	-	ko00000,ko01000,ko03400	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
APMKGJCD_01468	9.3e-292	yumB	1.6.99.3	-	C	ko:K03885	ko00190,map00190	ko00000,ko00001,ko01000	NADH dehydrogenase
APMKGJCD_01469	2.61e-148	-	-	-	GM	-	-	-	NAD(P)H-binding
APMKGJCD_01470	2.54e-52	-	-	-	-	-	-	-	-
APMKGJCD_01471	2.22e-168	rrp2	-	-	K	-	-	-	Transcriptional regulatory protein, C terminal
APMKGJCD_01472	2.93e-314	hpk2	-	-	T	-	-	-	Histidine kinase
APMKGJCD_01473	1.23e-56	-	-	-	-	-	-	-	-
APMKGJCD_01474	3.7e-96	-	-	-	-	-	-	-	-
APMKGJCD_01475	0.0	pox2	1.2.3.3	-	EH	ko:K00158	ko00620,ko01100,map00620,map01100	ko00000,ko00001,ko01000	Belongs to the TPP enzyme family
APMKGJCD_01476	9.85e-208	-	-	-	P	-	-	-	CorA-like Mg2+ transporter protein
APMKGJCD_01477	1.5e-179	pnuC	-	-	H	ko:K03811	-	ko00000,ko02000	nicotinamide mononucleotide transporter
APMKGJCD_01478	2.16e-75	-	-	-	K	-	-	-	Winged helix-turn-helix DNA-binding
APMKGJCD_01479	0.0	malL	3.2.1.20	GH31	G	ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Alpha amylase, catalytic domain protein
APMKGJCD_01480	1.45e-157	vex2	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter
APMKGJCD_01481	3.69e-276	yclI	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	FtsX-like permease family
APMKGJCD_01482	1.3e-264	XK27_05220	-	-	S	-	-	-	AI-2E family transporter
APMKGJCD_01483	5.2e-139	-	-	-	-	-	-	-	-
APMKGJCD_01484	0.0	-	-	-	M	ko:K07273	-	ko00000	hydrolase, family 25
APMKGJCD_01485	1.37e-247	ykoT	-	-	M	-	-	-	Glycosyl transferase family 2
APMKGJCD_01486	0.0	-	-	-	M	-	-	-	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
APMKGJCD_01487	2.41e-166	-	-	-	M	-	-	-	Protein of unknown function (DUF3737)
APMKGJCD_01488	4.37e-287	patB	4.4.1.8	-	E	ko:K14155	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko01000,ko01007	Aminotransferase, class I
APMKGJCD_01489	5.26e-234	ywbN	-	-	P	ko:K07223,ko:K16301	-	ko00000,ko01000,ko02000	Peroxidase
APMKGJCD_01490	4.37e-284	-	-	-	EGP	ko:K08161	-	ko00000,ko02000	Transporter, major facilitator family protein
APMKGJCD_01491	1.03e-58	-	-	-	-	-	-	-	-
APMKGJCD_01492	2.09e-287	opuCA	-	-	E	ko:K05847	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter, ATP-binding protein
APMKGJCD_01493	1.39e-136	opuCB	-	-	E	ko:K05846	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
APMKGJCD_01494	4.28e-225	opuCC	-	-	M	ko:K05845	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Periplasmic glycine betaine choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)
APMKGJCD_01495	3.23e-141	opuCD	-	-	P	ko:K05846	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
APMKGJCD_01496	7.3e-303	-	-	-	-	-	-	-	-
APMKGJCD_01497	4.93e-38	-	-	-	-	-	-	-	-
APMKGJCD_01498	2.95e-295	-	-	-	-	-	-	-	-
APMKGJCD_01499	5.02e-87	yodA	-	-	S	-	-	-	Tautomerase enzyme
APMKGJCD_01500	0.0	uvrA2	-	-	L	-	-	-	ABC transporter
APMKGJCD_01501	1.16e-129	-	-	-	S	ko:K08996	-	ko00000	Protein of unknown function (DUF1440)
APMKGJCD_01502	0.0	xylP1	-	-	G	ko:K03292	-	ko00000	MFS/sugar transport protein
APMKGJCD_01503	6.75e-66	-	-	-	K	-	-	-	helix_turn_helix multiple antibiotic resistance protein
APMKGJCD_01504	1.54e-51	-	-	-	-	-	-	-	-
APMKGJCD_01505	1.38e-89	cdd	3.5.4.5	-	F	ko:K01489	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis
APMKGJCD_01506	3.35e-137	-	3.4.21.89	-	U	ko:K03100	ko02024,ko03060,map02024,map03060	ko00000,ko00001,ko01000,ko01002	Belongs to the peptidase S26 family
APMKGJCD_01507	0.0	l1n	4.2.1.53	-	S	ko:K10254	-	ko00000,ko01000	Myosin-crossreactive antigen
APMKGJCD_01508	2.42e-160	-	-	-	-	-	-	-	-
APMKGJCD_01509	0.0	oatA	-	-	I	-	-	-	Acyltransferase
APMKGJCD_01510	1.72e-245	add	3.5.4.2, 3.5.4.4	-	F	ko:K01488,ko:K02029,ko:K21053	ko00230,ko01100,ko05340,map00230,map01100,map05340	ko00000,ko00001,ko00002,ko01000,ko02000	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
APMKGJCD_01511	1.41e-205	-	-	-	L	-	-	-	Phage integrase, N-terminal SAM-like domain
APMKGJCD_01512	6.2e-204	icaB	-	-	G	-	-	-	Polysaccharide deacetylase
APMKGJCD_01514	4.56e-87	-	-	-	S	-	-	-	Cupredoxin-like domain
APMKGJCD_01515	0.0	copA	3.6.3.3, 3.6.3.4, 3.6.3.5, 3.6.3.54	-	P	ko:K01533,ko:K01534,ko:K17686	ko01524,ko04016,map01524,map04016	ko00000,ko00001,ko01000	P-type ATPase
APMKGJCD_01516	6.98e-205	morA	-	-	S	-	-	-	reductase
APMKGJCD_01517	2.57e-290	dacA2	3.4.16.4	-	M	ko:K07258	ko00550,ko01100,map00550,map01100	ko00000,ko00001,ko01000,ko01002,ko01011	Belongs to the peptidase S11 family
APMKGJCD_01518	1.72e-103	atkY	-	-	K	ko:K02171	ko01501,map01501	ko00000,ko00001,ko00002,ko01504,ko03000	Copper transport repressor CopY TcrY
APMKGJCD_01519	0.0	copB	3.6.3.3, 3.6.3.4, 3.6.3.5, 3.6.3.54	-	P	ko:K01533,ko:K01534,ko:K17686	ko01524,ko04016,map01524,map04016	ko00000,ko00001,ko01000	P-type ATPase
APMKGJCD_01520	8.25e-217	-	-	-	EG	-	-	-	EamA-like transporter family
APMKGJCD_01521	4.18e-155	-	-	-	S	-	-	-	Elongation factor G-binding protein, N-terminal
APMKGJCD_01522	2.1e-136	maa	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	Maltose O-acetyltransferase
APMKGJCD_01523	1.47e-197	-	-	-	-	-	-	-	-
APMKGJCD_01524	0.0	pepD1	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
APMKGJCD_01526	0.0	pacL1	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	P-type ATPase
APMKGJCD_01527	3.92e-110	-	-	-	K	-	-	-	MarR family
APMKGJCD_01528	9.34e-130	-	-	-	S	-	-	-	NADPH-dependent FMN reductase
APMKGJCD_01529	7.55e-265	metE	2.1.1.14	-	E	ko:K00549	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	methionine synthase, vitamin-B12 independent
APMKGJCD_01530	0.0	-	-	-	EM	ko:K05845,ko:K05846	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Periplasmic glycine betaine choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)
APMKGJCD_01531	2.83e-209	proV	-	-	E	ko:K05847	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter, ATP-binding protein
APMKGJCD_01532	3.05e-90	-	-	-	K	ko:K03719	-	ko00000,ko03000,ko03036	AsnC family
APMKGJCD_01533	2.16e-238	adhP	1.1.1.1	-	C	ko:K00001,ko:K13953	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	alcohol dehydrogenase
APMKGJCD_01534	5.81e-290	dapE	3.5.1.18	-	E	ko:K01439	ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000	succinyl-diaminopimelate desuccinylase
APMKGJCD_01535	0.0	-	-	-	S	-	-	-	Leucine-rich repeat (LRR) protein
APMKGJCD_01536	1.53e-86	-	-	-	S	-	-	-	WxL domain surface cell wall-binding
APMKGJCD_01537	1.19e-152	-	-	-	-	-	-	-	-
APMKGJCD_01538	1.75e-311	yifK	-	-	E	ko:K03293	-	ko00000	Amino acid permease
APMKGJCD_01539	2.42e-127	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
APMKGJCD_01540	6.75e-96	-	-	-	C	-	-	-	Flavodoxin
APMKGJCD_01541	5.33e-287	fabV	1.3.1.44, 1.3.1.9	-	I	ko:K00209	ko00061,ko00650,ko01100,ko01120,ko01200,ko01212,map00061,map00650,map01100,map01120,map01200,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	NAD(P)H binding domain of trans-2-enoyl-CoA reductase
APMKGJCD_01542	1.07e-240	dus	-	-	J	-	-	-	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
APMKGJCD_01543	4.97e-206	-	-	-	S	-	-	-	Putative adhesin
APMKGJCD_01544	1.89e-120	-	-	-	S	-	-	-	Protein of unknown function (DUF1700)
APMKGJCD_01545	3.74e-73	-	-	-	K	ko:K10947	-	ko00000,ko03000	Transcriptional regulator PadR-like family
APMKGJCD_01546	4.14e-137	pncA	-	-	Q	-	-	-	Isochorismatase family
APMKGJCD_01547	1.45e-186	srfJ1	3.2.1.45	GH30	M	ko:K01201	ko00511,ko00600,ko01100,ko04142,map00511,map00600,map01100,map04142	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 30 family
APMKGJCD_01548	3.99e-28	srfJ1	3.2.1.45	GH30	M	ko:K01201	ko00511,ko00600,ko01100,ko04142,map00511,map00600,map01100,map04142	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 30 family
APMKGJCD_01549	4.82e-196	-	-	-	G	-	-	-	MFS/sugar transport protein
APMKGJCD_01550	9.39e-307	lacZ3	3.2.1.23	-	G	ko:K01190,ko:K12308	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	Beta-galactosidase trimerisation domain
APMKGJCD_01551	1.75e-100	-	-	-	K	-	-	-	AraC-like ligand binding domain
APMKGJCD_01552	9.2e-300	-	3.2.1.21, 3.2.1.52	GH3	G	ko:K01207,ko:K05349	ko00460,ko00500,ko00520,ko00531,ko00940,ko01100,ko01110,ko01501,map00460,map00500,map00520,map00531,map00940,map01100,map01110,map01501	ko00000,ko00001,ko00002,ko01000	Fibronectin type III-like domain
APMKGJCD_01553	6.43e-106	-	-	-	G	-	-	-	Peptidase_C39 like family
APMKGJCD_01554	7.8e-58	-	-	-	G	-	-	-	Peptidase_C39 like family
APMKGJCD_01555	2.05e-256	-	-	-	M	-	-	-	NlpC/P60 family
APMKGJCD_01556	0.0	glpK	2.7.1.30	-	F	ko:K00864	ko00561,ko01100,ko03320,ko04626,map00561,map01100,map03320,map04626	ko00000,ko00001,ko01000,ko04147	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
APMKGJCD_01557	1.27e-147	nth2	-	-	L	ko:K07457	-	ko00000	Base excision DNA repair protein, HhH-GPD family
APMKGJCD_01558	1.68e-50	-	-	-	-	-	-	-	-
APMKGJCD_01559	1.19e-173	puuD	-	-	S	ko:K07010	-	ko00000,ko01002	peptidase C26
APMKGJCD_01560	6.12e-156	-	-	-	S	-	-	-	Membrane
APMKGJCD_01561	0.0	-	-	-	O	-	-	-	Pro-kumamolisin, activation domain
APMKGJCD_01562	1.36e-213	-	-	-	I	-	-	-	Alpha beta
APMKGJCD_01563	3.29e-190	-	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Tyrosine phosphatase family
APMKGJCD_01564	1.19e-231	-	-	-	D	ko:K06889	-	ko00000	Alpha beta
APMKGJCD_01565	2.16e-126	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
APMKGJCD_01566	6.84e-311	purB	4.3.2.2	-	F	ko:K01756	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
APMKGJCD_01567	0.0	purA	6.3.4.4	-	F	ko:K01939	ko00230,ko00250,ko01100,map00230,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
APMKGJCD_01568	4.91e-240	guaC	1.7.1.7	-	F	ko:K00364	ko00230,map00230	ko00000,ko00001,ko01000	Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
APMKGJCD_01569	0.0	mntH	-	-	P	ko:K03322	-	ko00000,ko02000	H( )-stimulated, divalent metal cation uptake system
APMKGJCD_01570	1.11e-71	usp1	-	-	T	-	-	-	Universal stress protein family
APMKGJCD_01571	1.29e-132	-	-	-	K	ko:K03709	-	ko00000,ko03000	Helix-turn-helix diphteria tox regulatory element
APMKGJCD_01572	2.87e-126	-	-	-	P	-	-	-	Cadmium resistance transporter
APMKGJCD_01573	5.74e-120	-	-	-	-	-	-	-	-
APMKGJCD_01574	1.83e-96	-	-	-	-	-	-	-	-
APMKGJCD_01575	5.75e-103	yybA	-	-	K	-	-	-	Transcriptional regulator
APMKGJCD_01576	5.15e-100	-	-	-	S	ko:K02348	-	ko00000	Gnat family
APMKGJCD_01577	1.25e-239	-	1.1.1.219	-	GM	ko:K00091	-	ko00000,ko01000	Male sterility protein
APMKGJCD_01578	2.28e-132	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
APMKGJCD_01579	1.64e-108	padR	-	-	K	-	-	-	Virulence activator alpha C-term
APMKGJCD_01580	7.47e-133	padC	-	-	Q	ko:K13727	-	ko00000,ko01000	Phenolic acid decarboxylase
APMKGJCD_01582	1.71e-61	-	3.6.1.55	-	F	ko:K03574	-	ko00000,ko01000,ko03400	NUDIX domain
APMKGJCD_01583	1.22e-34	-	3.6.1.55	-	F	ko:K03574	-	ko00000,ko01000,ko03400	NUDIX domain
APMKGJCD_01585	0.0	-	-	-	S	-	-	-	response to antibiotic
APMKGJCD_01586	2.83e-182	-	-	-	S	-	-	-	zinc-ribbon domain
APMKGJCD_01587	2.24e-123	-	-	-	K	-	-	-	Acetyltransferase (GNAT) family
APMKGJCD_01588	6.94e-160	-	-	-	T	-	-	-	Putative diguanylate phosphodiesterase
APMKGJCD_01589	8.88e-132	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
APMKGJCD_01590	3.66e-280	-	-	-	S	-	-	-	ABC-2 family transporter protein
APMKGJCD_01591	6.8e-161	dctR	-	-	K	ko:K02475,ko:K11692	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	cheY-homologous receiver domain
APMKGJCD_01592	0.0	yufL	2.7.13.3	-	T	ko:K02476,ko:K11614	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Single cache domain 3
APMKGJCD_01593	7.56e-242	idhA	1.1.1.28	-	CH	ko:K03778	ko00620,ko01120,map00620,map01120	ko00000,ko00001,ko01000	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
APMKGJCD_01594	1.78e-243	-	-	-	S	ko:K07088	-	ko00000	Membrane transport protein
APMKGJCD_01595	0.0	nhaC	-	-	C	ko:K03315	-	ko00000,ko02000	Na H antiporter NhaC
APMKGJCD_01596	1.9e-121	-	-	-	S	-	-	-	Acetyltransferase (GNAT) family
APMKGJCD_01597	3.82e-91	-	-	-	-	-	-	-	-
APMKGJCD_01598	1.25e-216	-	-	-	C	-	-	-	Aldo keto reductase
APMKGJCD_01599	2.16e-77	-	-	-	-	-	-	-	-
APMKGJCD_01600	1.35e-162	-	-	-	P	ko:K10716	-	ko00000,ko02000	Ion channel
APMKGJCD_01601	1.68e-151	-	3.5.1.18	-	E	ko:K01439	ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000	succinyl-diaminopimelate desuccinylase
APMKGJCD_01602	4.38e-90	-	3.5.1.18	-	E	ko:K01439	ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000	succinyl-diaminopimelate desuccinylase
APMKGJCD_01603	2.26e-125	yxkA	-	-	S	ko:K06910	-	ko00000	Phosphatidylethanolamine-binding protein
APMKGJCD_01604	6.41e-118	usp5	-	-	T	-	-	-	universal stress protein
APMKGJCD_01605	0.0	-	-	-	S	-	-	-	membrane
APMKGJCD_01606	8.02e-171	pnuC	-	-	H	ko:K03811	-	ko00000,ko02000	nicotinamide mononucleotide transporter
APMKGJCD_01607	4.23e-153	ybhL	-	-	S	ko:K06890	-	ko00000	Belongs to the BI1 family
APMKGJCD_01608	1.7e-299	-	-	-	F	ko:K03458	-	ko00000	Permease
APMKGJCD_01609	0.0	guaD	3.5.4.3	-	F	ko:K01487	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000	Amidohydrolase family
APMKGJCD_01610	0.0	polA	2.7.7.7	-	L	ko:K02335	ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440	ko00000,ko00001,ko01000,ko03032,ko03400	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
APMKGJCD_01611	1.66e-210	fpg	3.2.2.23, 4.2.99.18	-	L	ko:K10563	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
APMKGJCD_01612	2.06e-143	coaE	2.7.1.24	-	F	ko:K00859	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
APMKGJCD_01613	4.94e-114	nrdR	-	-	K	ko:K07738	-	ko00000,ko03000	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
APMKGJCD_01614	2.42e-314	dnaB	-	-	L	ko:K03346	-	ko00000,ko03032	replication initiation and membrane attachment
APMKGJCD_01615	7.27e-193	dnaI	-	-	L	ko:K11144	-	ko00000,ko03032	Primosomal protein DnaI
APMKGJCD_01616	0.0	thrS	6.1.1.3	-	J	ko:K01868	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
APMKGJCD_01617	2.31e-101	infC	-	-	J	ko:K02520	-	ko00000,ko03012,ko03029	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
APMKGJCD_01618	2.41e-37	rpmI	-	-	J	ko:K02916	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL35 family
APMKGJCD_01619	6.09e-72	rplT	-	-	J	ko:K02887	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
APMKGJCD_01620	2.6e-134	yqeG	-	-	S	ko:K07015	-	ko00000	HAD phosphatase, family IIIA
APMKGJCD_01621	9.12e-285	yqeH	-	-	S	ko:K06948	-	ko00000,ko03009	Ribosome biogenesis GTPase YqeH
APMKGJCD_01622	1.5e-64	yhbY	-	-	J	ko:K07574	-	ko00000,ko03009	RNA-binding protein
APMKGJCD_01623	8.57e-141	nadD	2.7.7.18	-	H	ko:K00969	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
APMKGJCD_01624	3.19e-125	yqeK	-	-	H	-	-	-	Hydrolase, HD family
APMKGJCD_01625	3.15e-78	rsfS	-	-	J	ko:K09710	-	ko00000,ko03009	Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
APMKGJCD_01626	2.15e-182	yqeM	-	-	Q	-	-	-	Methyltransferase
APMKGJCD_01627	7.73e-278	ylbM	-	-	S	-	-	-	Belongs to the UPF0348 family
APMKGJCD_01628	4.1e-124	ylbN	-	-	S	ko:K07040	-	ko00000	Uncharacterized ACR, COG1399
APMKGJCD_01629	4.39e-39	rpmF	-	-	J	ko:K02911	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Belongs to the bacterial ribosomal protein bL32 family
APMKGJCD_01630	5.74e-106	-	3.1.3.23	-	S	ko:K07757	-	ko00000,ko01000	Sucrose-6F-phosphate phosphohydrolase
APMKGJCD_01631	5.57e-70	czrA	-	-	K	ko:K22043	-	ko00000,ko03000	Transcriptional regulator, ArsR family
APMKGJCD_01632	8.69e-149	-	-	-	O	-	-	-	Zinc-dependent metalloprotease
APMKGJCD_01633	4.42e-248	adhP	1.1.1.1	-	C	ko:K00001,ko:K13953	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	alcohol dehydrogenase
APMKGJCD_01634	3.25e-154	csrR	-	-	K	-	-	-	response regulator
APMKGJCD_01635	0.0	arlS	2.7.13.3	-	T	ko:K18940	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
APMKGJCD_01636	2.35e-92	yxeA	-	-	S	-	-	-	Protein of unknown function (DUF1093)
APMKGJCD_01637	4.32e-204	yidC	-	-	U	ko:K03217	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044,ko03029	Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
APMKGJCD_01638	3.93e-59	acyP	3.6.1.7	-	C	ko:K01512	ko00620,ko00627,ko01120,map00620,map00627,map01120	ko00000,ko00001,ko01000	Belongs to the acylphosphatase family
APMKGJCD_01639	5.03e-181	spoU	-	-	J	ko:K03437	-	ko00000,ko03016	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
APMKGJCD_01640	8.56e-119	-	-	-	S	ko:K06950	-	ko00000	Metal dependent phosphohydrolases with conserved 'HD' motif.
APMKGJCD_01641	4.69e-46	yodB	-	-	K	-	-	-	Transcriptional regulator, HxlR family
APMKGJCD_01642	1.45e-258	pheS	6.1.1.20	-	J	ko:K01889	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
APMKGJCD_01643	0.0	pheT	6.1.1.20	-	J	ko:K01890	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
APMKGJCD_01644	7.58e-267	mltG	-	-	S	ko:K07082	-	ko00000	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
APMKGJCD_01645	5.67e-155	udk	2.7.1.48	-	F	ko:K00876	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	Cytidine monophosphokinase
APMKGJCD_01646	6.68e-93	greA	-	-	K	ko:K03624	-	ko00000,ko03021	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
APMKGJCD_01647	8.94e-75	yneR	-	-	S	-	-	-	Belongs to the HesB IscA family
APMKGJCD_01648	0.0	-	-	-	S	-	-	-	membrane
APMKGJCD_01649	5.88e-38	-	-	-	S	ko:K09779	-	ko00000	Domain of unknown function (DUF378)
APMKGJCD_01650	0.0	pbp2b	-	-	M	ko:K00687,ko:K12553,ko:K21465,ko:K21466	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01011	Penicillin-binding Protein
APMKGJCD_01651	5.33e-30	rpmG	-	-	J	ko:K02913	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL33 family
APMKGJCD_01652	5.42e-128	fthC	6.3.3.2	-	H	ko:K01934	ko00670,ko01100,map00670,map01100	ko00000,ko00001,ko01000	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
APMKGJCD_01653	6.85e-155	gluP	3.4.21.105	-	S	ko:K19225	-	ko00000,ko01000,ko01002	Peptidase, S54 family
APMKGJCD_01654	9.85e-49	yqgQ	-	-	S	-	-	-	Bacterial protein of unknown function (DUF910)
APMKGJCD_01655	2.81e-232	glcK	2.7.1.2	-	G	ko:K00845	ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Glucokinase
APMKGJCD_01656	1.11e-92	yqhL	-	-	P	-	-	-	Rhodanese-like protein
APMKGJCD_01657	1.01e-31	WQ51_02665	-	-	S	-	-	-	Protein of unknown function (DUF3042)
APMKGJCD_01658	2.92e-182	glpQ	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	phosphodiesterase
APMKGJCD_01659	5.17e-220	miaA	2.5.1.75	-	F	ko:K00791	ko00908,ko01100,ko01110,map00908,map01100,map01110	ko00000,ko00001,ko01000,ko01006,ko03016	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
APMKGJCD_01660	7.74e-86	glnR	-	-	K	ko:K03713,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000,ko03000	Transcriptional regulator
APMKGJCD_01661	0.0	glnA	6.3.1.2	-	E	ko:K01915	ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727	ko00000,ko00001,ko01000,ko04147	glutamine synthetase
APMKGJCD_01662	1.11e-201	-	-	-	-	-	-	-	-
APMKGJCD_01663	7.15e-230	-	-	-	-	-	-	-	-
APMKGJCD_01664	7.73e-127	-	-	-	S	-	-	-	Protein conserved in bacteria
APMKGJCD_01665	8.42e-124	-	-	-	K	-	-	-	Transcriptional regulator
APMKGJCD_01666	5.22e-65	rplU	-	-	J	ko:K02888	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein binds to 23S rRNA in the presence of protein L20
APMKGJCD_01667	7.92e-76	ysxB	-	-	J	ko:K07584	-	ko00000	Cysteine protease Prp
APMKGJCD_01668	8.46e-65	rpmA	-	-	J	ko:K02899	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL27 family
APMKGJCD_01669	7.11e-253	pepP	3.4.11.9, 3.4.13.9	-	E	ko:K01262,ko:K01271	-	ko00000,ko01000,ko01002	Creatinase/Prolidase N-terminal domain
APMKGJCD_01670	5.18e-128	efp	-	-	J	ko:K02356	-	ko00000,ko03012	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
APMKGJCD_01671	8.9e-96	WQ51_04310	-	-	S	ko:K10947	-	ko00000,ko03000	Asp23 family, cell envelope-related function
APMKGJCD_01672	2.79e-97	nusB	-	-	K	ko:K03625	-	ko00000,ko03009,ko03021	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
APMKGJCD_01673	3.85e-201	folD	1.5.1.5, 3.5.4.9	-	F	ko:K01491	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
APMKGJCD_01674	3.16e-312	xseA	3.1.11.6	-	L	ko:K03601	ko03430,map03430	ko00000,ko00001,ko01000,ko03400	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
APMKGJCD_01675	1.65e-47	xseB	3.1.11.6	-	L	ko:K03602	ko03430,map03430	ko00000,ko00001,ko01000,ko03400	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
APMKGJCD_01676	3.09e-213	ispA	2.5.1.1, 2.5.1.10, 2.5.1.29	-	H	ko:K13789	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko01006	Belongs to the FPP GGPP synthase family
APMKGJCD_01677	3.41e-191	rrmJ	2.1.1.226, 2.1.1.227	-	J	ko:K06442	-	ko00000,ko01000,ko03009	Ribosomal RNA large subunit methyltransferase J
APMKGJCD_01678	9.88e-100	argR2	-	-	K	ko:K03402	-	ko00000,ko03000	Regulates arginine biosynthesis genes
APMKGJCD_01679	0.0	recN	-	-	L	ko:K03631	-	ko00000,ko03400	May be involved in recombinational repair of damaged DNA
APMKGJCD_01681	6.94e-70	-	-	-	-	-	-	-	-
APMKGJCD_01682	2.35e-134	gmk	2.7.4.8	-	F	ko:K00942	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko00002,ko01000	Essential for recycling GMP and indirectly, cGMP
APMKGJCD_01683	2.53e-42	rpoZ	2.7.7.6	-	K	ko:K03060	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
APMKGJCD_01684	9.37e-276	coaBC	4.1.1.36, 6.3.2.5	-	H	ko:K01598,ko:K13038	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
APMKGJCD_01685	0.0	priA	-	-	L	ko:K04066	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
APMKGJCD_01686	1.32e-221	fmt	2.1.2.9	-	J	ko:K00604	ko00670,ko00970,map00670,map00970	ko00000,ko00001,ko01000	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
APMKGJCD_01687	4.18e-315	sun	2.1.1.176	-	J	ko:K03500	-	ko00000,ko01000,ko03009	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
APMKGJCD_01688	8.97e-171	stp	3.1.3.16	-	T	ko:K20074	-	ko00000,ko01000,ko01009	phosphatase
APMKGJCD_01689	0.0	prkC	2.7.11.1	-	KLT	ko:K08884,ko:K12132	-	ko00000,ko01000,ko01001	serine threonine protein kinase
APMKGJCD_01690	4.57e-214	rsgA	3.1.3.100	-	S	ko:K06949	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000,ko03009	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
APMKGJCD_01691	1.34e-152	rpe	5.1.3.1	-	G	ko:K01783	ko00030,ko00040,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the ribulose-phosphate 3-epimerase family
APMKGJCD_01692	1.77e-165	thiN	2.7.6.2	-	H	ko:K00949	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000	thiamine pyrophosphokinase
APMKGJCD_01693	4.64e-36	rpmB	-	-	J	ko:K02902	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL28 family
APMKGJCD_01694	1.43e-75	yloU	-	-	S	-	-	-	Asp23 family, cell envelope-related function
APMKGJCD_01695	0.0	yloV	-	-	S	ko:K07030	-	ko00000	DAK2 domain fusion protein YloV
APMKGJCD_01696	0.0	recG	3.6.4.12	-	L	ko:K03655	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
APMKGJCD_01697	1.11e-240	plsX	2.3.1.15	-	I	ko:K03621	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
APMKGJCD_01698	9.76e-50	acpP	-	-	IQ	ko:K02078	-	ko00000,ko00001	Carrier of the growing fatty acid chain in fatty acid biosynthesis
APMKGJCD_01699	5.47e-167	rnc	3.1.26.3	-	J	ko:K03685	ko03008,ko05205,map03008,map05205	ko00000,ko00001,ko01000,ko03009,ko03019,ko03036	Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
APMKGJCD_01700	0.0	smc	-	-	D	ko:K03529	-	ko00000,ko03036	Required for chromosome condensation and partitioning
APMKGJCD_01701	2.74e-233	ftsY	-	-	U	ko:K03110	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
APMKGJCD_01702	3.13e-55	ylxM	-	-	S	ko:K09787	-	ko00000	Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
APMKGJCD_01703	3.49e-280	ffh	3.6.5.4	-	U	ko:K03106	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko01000,ko02044	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
APMKGJCD_01704	0.0	pacL	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	P-type ATPase
APMKGJCD_01705	1.55e-272	-	-	-	S	-	-	-	associated with various cellular activities
APMKGJCD_01706	0.0	-	-	-	S	-	-	-	Putative metallopeptidase domain
APMKGJCD_01707	7.31e-65	-	-	-	-	-	-	-	-
APMKGJCD_01708	3.48e-58	rpsP	-	-	J	ko:K02959	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Belongs to the bacterial ribosomal protein bS16 family
APMKGJCD_01709	6.46e-54	ylqC	-	-	S	ko:K06960	-	ko00000	Belongs to the UPF0109 family
APMKGJCD_01710	5.09e-119	rimM	-	-	J	ko:K02860	-	ko00000,ko03009	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
APMKGJCD_01711	7.45e-182	trmD	2.1.1.228	-	J	ko:K00554	-	ko00000,ko01000,ko03016	Belongs to the RNA methyltransferase TrmD family
APMKGJCD_01712	2.13e-76	rplS	-	-	J	ko:K02884	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
APMKGJCD_01713	2.36e-19	-	-	-	M	-	-	-	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
APMKGJCD_01714	9.21e-99	fabZ	4.2.1.59	-	I	ko:K02372	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
APMKGJCD_01715	2.5e-104	-	-	-	K	-	-	-	Transcriptional regulator
APMKGJCD_01716	5.45e-232	fabH	2.3.1.180	-	I	ko:K00648	ko00061,ko01100,ko01212,map00061,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
APMKGJCD_01717	1.84e-49	acpP	-	-	IQ	ko:K02078	-	ko00000,ko00001	Carrier of the growing fatty acid chain in fatty acid biosynthesis
APMKGJCD_01718	7.29e-214	fabD	2.3.1.39	-	I	ko:K00645,ko:K15327,ko:K15329	ko00061,ko00333,ko01100,ko01130,ko01212,map00061,map00333,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004,ko01008	Malonyl CoA-acyl carrier protein transacylase
APMKGJCD_01719	2.74e-157	fabG	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	reductase
APMKGJCD_01720	8.3e-293	fabF	2.3.1.179	-	I	ko:K09458	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
APMKGJCD_01721	5.03e-95	accB	-	-	I	ko:K02160	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002	first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
APMKGJCD_01722	2e-94	fabZ2	4.2.1.59	-	I	ko:K02372	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	FabA-like domain
APMKGJCD_01723	0.0	accC	6.3.4.14, 6.4.1.2	-	I	ko:K01961	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002,ko01000	Acetyl-CoA carboxylase biotin carboxylase subunit
APMKGJCD_01724	9.5e-201	accD	2.1.3.15, 6.4.1.2	-	I	ko:K01963	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002,ko01000	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
APMKGJCD_01725	6.89e-183	accA	2.1.3.15, 6.4.1.2	-	I	ko:K01962	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002,ko01000	alpha subunit
APMKGJCD_01726	7.68e-174	fabI	1.3.1.10, 1.3.1.9	-	I	ko:K00208	ko00061,ko00333,ko00780,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Enoyl- acyl-carrier-protein reductase NADH
APMKGJCD_01727	4.85e-187	birA	6.3.4.15	-	H	ko:K03524	ko00780,ko01100,map00780,map01100	ko00000,ko00001,ko01000,ko03000	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
APMKGJCD_01728	6.62e-111	bioY	-	-	S	ko:K03523	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	BioY family
APMKGJCD_01729	1.25e-67	-	-	-	S	-	-	-	MazG nucleotide pyrophosphohydrolase domain
APMKGJCD_01730	5.51e-118	entB	-	-	Q	-	-	-	Isochorismatase family
APMKGJCD_01731	1.92e-102	-	-	-	S	-	-	-	Protein of unknown function (DUF3021)
APMKGJCD_01732	2.57e-74	-	-	-	K	-	-	-	LytTr DNA-binding domain
APMKGJCD_01733	2.1e-65	-	-	-	N	ko:K18843	-	ko00000,ko02048	PFAM Uncharacterised protein family UPF0150
APMKGJCD_01734	4.35e-187	-	-	-	S	-	-	-	Cysteine-rich secretory protein family
APMKGJCD_01737	1.04e-141	-	-	-	S	-	-	-	DJ-1/PfpI family
APMKGJCD_01738	1.31e-268	-	1.1.1.90	-	C	ko:K00055	ko00350,ko00360,ko00622,ko00623,ko01100,ko01120,ko01220,map00350,map00360,map00622,map00623,map01100,map01120,map01220	ko00000,ko00001,ko00002,ko01000	Zn-dependent alcohol dehydrogenases, class III
APMKGJCD_01739	6.38e-192	-	-	-	K	-	-	-	LysR substrate binding domain
APMKGJCD_01740	2.28e-57	-	-	-	K	-	-	-	MerR, DNA binding
APMKGJCD_01741	7.26e-241	-	-	-	C	-	-	-	Aldo/keto reductase family
APMKGJCD_01742	1.98e-243	rsgA_2	3.1.3.100	-	S	ko:K06949	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000,ko03009	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
APMKGJCD_01743	0.0	katA	1.11.1.6	-	C	ko:K03781	ko00380,ko00630,ko01110,ko01130,ko01200,ko04011,ko04016,ko04068,ko04146,ko04211,ko04212,ko04213,ko05014,map00380,map00630,map01110,map01130,map01200,map04011,map04016,map04068,map04146,map04211,map04212,map04213,map05014	ko00000,ko00001,ko00002,ko01000	Belongs to the catalase family
APMKGJCD_01744	3.15e-131	-	-	-	J	ko:K03817	-	ko00000,ko01000,ko03009	Acetyltransferase (GNAT) domain
APMKGJCD_01745	2.14e-91	-	-	-	-	-	-	-	-
APMKGJCD_01747	3.69e-192	-	-	-	K	-	-	-	Helix-turn-helix
APMKGJCD_01748	0.0	potE	-	-	E	-	-	-	Amino Acid
APMKGJCD_01749	9.87e-52	pepD4	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
APMKGJCD_01750	5.76e-253	pepD4	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
APMKGJCD_01751	2.96e-198	yitT	-	-	S	-	-	-	Uncharacterised 5xTM membrane BCR, YitT family COG1284
APMKGJCD_01752	1.22e-36	dmpI	5.3.2.6	-	G	ko:K01821	ko00362,ko00621,ko00622,ko01100,ko01120,ko01220,map00362,map00621,map00622,map01100,map01120,map01220	ko00000,ko00001,ko00002,ko01000	Belongs to the 4-oxalocrotonate tautomerase family
APMKGJCD_01753	0.0	glpK	2.7.1.30	-	F	ko:K00864	ko00561,ko01100,ko03320,ko04626,map00561,map01100,map03320,map04626	ko00000,ko00001,ko01000,ko04147	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
APMKGJCD_01755	2.47e-74	-	-	-	S	-	-	-	Protein of unknown function (DUF2975)
APMKGJCD_01756	6.21e-39	yozG	-	-	K	ko:K07727	-	ko00000,ko03000	Transcriptional regulator
APMKGJCD_01757	1.71e-284	-	-	-	-	-	-	-	-
APMKGJCD_01758	1.41e-136	-	-	-	-	-	-	-	-
APMKGJCD_01759	4.14e-259	icaA	-	-	M	-	-	-	Glycosyl transferase family group 2
APMKGJCD_01760	5.82e-73	-	-	-	M	-	-	-	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
APMKGJCD_01761	3.1e-143	-	-	-	M	-	-	-	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
APMKGJCD_01762	0.0	yhcA	-	-	V	ko:K02003,ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
APMKGJCD_01763	3.09e-133	-	-	-	K	-	-	-	Psort location Cytoplasmic, score
APMKGJCD_01764	8.26e-92	arsC	1.20.4.1	-	T	ko:K03741	-	ko00000,ko01000	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
APMKGJCD_01765	6.09e-53	-	-	-	S	-	-	-	Mor transcription activator family
APMKGJCD_01766	2.33e-56	-	-	-	S	-	-	-	Mor transcription activator family
APMKGJCD_01767	6.64e-162	-	3.5.1.28	-	M	ko:K01448	ko01503,map01503	ko00000,ko00001,ko00002,ko01000,ko01011,ko03036	N-acetylmuramoyl-L-alanine amidase
APMKGJCD_01769	9.32e-165	ybhF_2	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	AAA domain, putative AbiEii toxin, Type IV TA system
APMKGJCD_01770	9.15e-250	-	-	-	V	ko:K01992	-	ko00000,ko00002,ko02000	ABC transporter
APMKGJCD_01771	7.75e-145	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
APMKGJCD_01772	2.14e-226	lctO	1.13.12.4	-	C	ko:K00467,ko:K10530	ko00620,map00620	ko00000,ko00001,ko01000	L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases
APMKGJCD_01773	1.45e-78	-	-	-	S	-	-	-	Belongs to the HesB IscA family
APMKGJCD_01774	3.19e-210	nhaK	-	-	P	ko:K03316	-	ko00000	Sodium proton antiporter
APMKGJCD_01776	8.88e-39	yycB	-	-	P	ko:K03449	-	ko00000,ko02000	Major Facilitator Superfamily
APMKGJCD_01777	0.0	kup	-	-	P	ko:K03549	-	ko00000,ko02000	Transport of potassium into the cell
APMKGJCD_01778	8.1e-236	-	-	-	C	-	-	-	Zinc-binding dehydrogenase
APMKGJCD_01779	5.39e-23	-	-	-	GM	-	-	-	Male sterility protein
APMKGJCD_01780	5.8e-92	-	-	-	GM	-	-	-	Male sterility protein
APMKGJCD_01781	3.48e-103	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
APMKGJCD_01782	1.61e-87	-	-	-	K	ko:K18909	-	ko00000,ko00002,ko01504,ko03000	MarR family
APMKGJCD_01783	5.2e-26	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2316)
APMKGJCD_01784	1.97e-253	adhB	1.1.1.1	-	E	ko:K00001	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	alcohol dehydrogenase
APMKGJCD_01785	3.18e-49	-	-	-	K	-	-	-	Transcriptional regulator
APMKGJCD_01786	1e-37	-	-	-	K	-	-	-	Transcriptional regulator
APMKGJCD_01787	2.85e-209	akr5f	1.1.1.346	-	S	ko:K06221	-	ko00000,ko01000	reductase
APMKGJCD_01788	5.34e-212	-	1.1.1.346	-	S	ko:K06221	-	ko00000,ko01000	Oxidoreductase, aldo keto reductase family protein
APMKGJCD_01789	5.96e-94	-	-	-	-	-	-	-	-
APMKGJCD_01790	1.96e-273	dapE	3.5.1.18	-	E	ko:K01439	ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000	succinyl-diaminopimelate desuccinylase
APMKGJCD_01791	2.07e-196	yitU	3.1.3.104	-	S	ko:K21064	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	hydrolase
APMKGJCD_01792	0.0	rsmF	-	-	J	-	-	-	NOL1 NOP2 sun family protein
APMKGJCD_01793	7.01e-244	fni	5.3.3.2	-	C	ko:K01823	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
APMKGJCD_01794	1.29e-261	mvaK2	2.7.4.2	-	I	ko:K00938	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	phosphomevalonate kinase
APMKGJCD_01795	2.91e-230	mvaD	4.1.1.33	-	I	ko:K01597	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	diphosphomevalonate decarboxylase
APMKGJCD_01796	1.74e-222	mvk	2.7.1.36	-	I	ko:K00869	ko00900,ko01100,ko01110,ko01130,ko04146,map00900,map01100,map01110,map01130,map04146	ko00000,ko00001,ko00002,ko01000	mevalonate kinase
APMKGJCD_01797	0.0	dinG	3.6.4.12	-	L	ko:K03722	-	ko00000,ko01000,ko03400	helicase involved in DNA repair and perhaps also replication
APMKGJCD_01798	1.53e-113	ypmB	-	-	S	-	-	-	Protein conserved in bacteria
APMKGJCD_01799	1.13e-271	aspB	2.6.1.1, 2.6.1.14	-	E	ko:K00812,ko:K22457	ko00220,ko00250,ko00270,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko01000,ko01007	Aminotransferase
APMKGJCD_01800	1.33e-159	dnaD	-	-	L	ko:K02086	-	ko00000	Replication initiation and membrane attachment
APMKGJCD_01801	2.51e-115	yetL	-	-	K	-	-	-	helix_turn_helix multiple antibiotic resistance protein
APMKGJCD_01802	2.29e-81	-	-	-	P	-	-	-	Rhodanese Homology Domain
APMKGJCD_01803	0.0	ponA	2.4.1.129, 3.4.16.4	GT51	M	ko:K05366	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01003,ko01011	penicillin-binding protein 1A
APMKGJCD_01804	9.96e-147	recU	-	-	L	ko:K03700	-	ko00000,ko03400	Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
APMKGJCD_01805	1.96e-138	ypsA	-	-	S	-	-	-	Belongs to the UPF0398 family
APMKGJCD_01806	7e-52	gpsB	-	-	D	-	-	-	Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
APMKGJCD_01808	8.39e-281	ypsC	-	-	L	ko:K07444	-	ko00000,ko01000	Belongs to the methyltransferase superfamily
APMKGJCD_01809	2.51e-90	-	-	-	FG	ko:K02503	-	ko00000,ko04147	Scavenger mRNA decapping enzyme C-term binding
APMKGJCD_01810	1.67e-315	amt	-	-	P	ko:K03320	-	ko00000,ko02000	ammonium transporter
APMKGJCD_01811	1.17e-38	-	-	-	-	-	-	-	-
APMKGJCD_01812	9.92e-108	-	3.6.1.55	-	F	ko:K03574	-	ko00000,ko01000,ko03400	Belongs to the Nudix hydrolase family
APMKGJCD_01813	1.16e-72	-	-	-	-	-	-	-	-
APMKGJCD_01814	1.35e-164	-	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
APMKGJCD_01815	1.06e-112	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
APMKGJCD_01816	1.79e-144	XK27_02070	-	-	S	ko:K07078	-	ko00000	Nitroreductase family
APMKGJCD_01817	2.26e-266	yurR	1.4.5.1	-	E	ko:K00285	ko00360,map00360	ko00000,ko00001,ko01000	FAD dependent oxidoreductase
APMKGJCD_01818	1.59e-90	rnhA	3.1.26.4	-	L	ko:K03469	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Ribonuclease HI
APMKGJCD_01819	1.53e-74	esbA	-	-	S	-	-	-	Family of unknown function (DUF5322)
APMKGJCD_01820	0.0	fhs	6.3.4.3	-	F	ko:K01938	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Belongs to the formate--tetrahydrofolate ligase family
APMKGJCD_01821	7.74e-106	lspA	3.4.23.36	-	MU	ko:K03101	ko03060,map03060	ko00000,ko00001,ko01000,ko01002	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
APMKGJCD_01822	3.12e-221	rluD	5.4.99.23	-	J	ko:K06180	-	ko00000,ko01000,ko03009	Responsible for synthesis of pseudouridine from uracil
APMKGJCD_01823	6.85e-115	pyrR	2.4.2.9	-	F	ko:K02825	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000,ko03000	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
APMKGJCD_01824	8.1e-261	carA	6.3.5.5	-	F	ko:K01956	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the CarA family
APMKGJCD_01825	0.0	pyrAB2	6.3.5.5	-	F	ko:K01955	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthase
APMKGJCD_01826	0.0	FbpA	-	-	K	-	-	-	Fibronectin-binding protein
APMKGJCD_01827	2.12e-92	-	-	-	K	-	-	-	Transcriptional regulator
APMKGJCD_01828	5.4e-253	npp	-	-	S	-	-	-	type I phosphodiesterase nucleotide pyrophosphatase
APMKGJCD_01829	3.29e-298	yxiO	-	-	S	ko:K06902	ko04138,map04138	ko00000,ko00001,ko02000,ko04131	Vacuole effluxer Atg22 like
APMKGJCD_01830	2.83e-203	-	-	-	S	-	-	-	EDD domain protein, DegV family
APMKGJCD_01831	1.14e-113	-	-	-	S	-	-	-	ECF transporter, substrate-specific component
APMKGJCD_01832	2.46e-97	gtcA	-	-	S	-	-	-	Teichoic acid glycosylation protein
APMKGJCD_01833	6.2e-114	ysaA	-	-	V	-	-	-	VanZ like family
APMKGJCD_01834	4.56e-120	-	-	-	V	-	-	-	VanZ like family
APMKGJCD_01835	2.15e-153	nth	4.2.99.18	-	L	ko:K10773	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
APMKGJCD_01836	5.66e-188	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
APMKGJCD_01837	3.15e-229	-	-	-	C	-	-	-	Zinc-binding dehydrogenase
APMKGJCD_01838	1.02e-191	pphA	3.1.3.16	-	T	ko:K07313	-	ko00000,ko01000	Calcineurin-like phosphoesterase
APMKGJCD_01839	4.15e-170	-	-	-	Q	-	-	-	Methyltransferase domain
APMKGJCD_01840	0.0	-	-	-	-	-	-	-	-
APMKGJCD_01841	1.9e-257	xerS	-	-	L	ko:K04763	-	ko00000,ko03036	Belongs to the 'phage' integrase family
APMKGJCD_01842	3.93e-99	rppH3	-	-	F	-	-	-	NUDIX domain
APMKGJCD_01843	1.34e-130	msrA	1.8.4.11, 1.8.4.12	-	O	ko:K07304,ko:K12267	-	ko00000,ko01000	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
APMKGJCD_01844	1e-106	msrB	1.8.4.12	-	O	ko:K07305	-	ko00000,ko01000	peptide methionine sulfoxide reductase
APMKGJCD_01845	1.47e-125	XK27_08875	-	-	O	-	-	-	PFAM peptidase M10A and M12B, matrixin and adamalysin
APMKGJCD_01846	1.94e-216	ppaC	3.6.1.1	-	C	ko:K15986	ko00190,map00190	ko00000,ko00001,ko01000	inorganic pyrophosphatase
APMKGJCD_01847	4.34e-235	-	-	-	K	-	-	-	Transcriptional regulator
APMKGJCD_01848	1.2e-102	parC	-	-	L	ko:K02621	-	ko00000,ko01000,ko02048,ko03032,ko03036	Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
APMKGJCD_01849	0.0	parC	-	-	L	ko:K02621	-	ko00000,ko01000,ko02048,ko03032,ko03036	Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
APMKGJCD_01850	0.0	parE	-	-	L	ko:K02622	-	ko00000,ko01000,ko02048,ko03032,ko03036	Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
APMKGJCD_01851	5.45e-138	plsY	2.3.1.15	-	I	ko:K08591	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
APMKGJCD_01852	3.49e-214	lacX	5.1.3.3	-	G	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Aldose 1-epimerase
APMKGJCD_01853	0.0	hslU	-	-	O	ko:K03667	-	ko00000,ko03110	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
APMKGJCD_01854	1.68e-121	hslV	3.4.25.2	-	O	ko:K01419	-	ko00000,ko01000,ko01002	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
APMKGJCD_01855	5.87e-228	xerC	-	-	D	ko:K03733,ko:K04763	-	ko00000,ko03036	Belongs to the 'phage' integrase family. XerC subfamily
APMKGJCD_01856	1.52e-35	topA	5.99.1.2	-	L	ko:K03168	-	ko00000,ko01000,ko03032,ko03400	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
APMKGJCD_01857	0.0	topA	5.99.1.2	-	L	ko:K03168	-	ko00000,ko01000,ko03032,ko03400	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
APMKGJCD_01858	4.76e-215	dprA	-	-	LU	ko:K04096	-	ko00000	DNA protecting protein DprA
APMKGJCD_01859	1.45e-174	rnhB	3.1.26.4	-	L	ko:K03470	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
APMKGJCD_01860	2.42e-203	rbgA	-	-	S	ko:K14540	-	ko00000,ko03009	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
APMKGJCD_01862	9.5e-98	abiGI	-	-	K	-	-	-	Psort location Cytoplasmic, score
APMKGJCD_01865	8.7e-165	-	-	-	-	-	-	-	-
APMKGJCD_01866	6.56e-48	yozE	-	-	S	-	-	-	Belongs to the UPF0346 family
APMKGJCD_01867	9.91e-137	ypmS	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2140)
APMKGJCD_01868	1.47e-214	XK27_03630	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase
APMKGJCD_01869	1.23e-190	WQ51_01275	-	-	S	-	-	-	EDD domain protein, DegV family
APMKGJCD_01870	1.06e-147	hlyIII	-	-	S	ko:K11068	-	ko00000,ko02042	protein, hemolysin III
APMKGJCD_01873	4.54e-70	-	2.7.1.196, 2.7.1.205	-	G	ko:K02760	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
APMKGJCD_01874	0.0	dtpT	-	-	U	ko:K03305	-	ko00000	amino acid peptide transporter
APMKGJCD_01875	5.29e-193	-	-	-	S	-	-	-	Calcineurin-like phosphoesterase
APMKGJCD_01878	8.13e-172	proC	1.5.1.2	-	E	ko:K00286	ko00330,ko01100,ko01110,ko01130,ko01230,map00330,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
APMKGJCD_01879	1.56e-276	nagA	3.5.1.25	-	G	ko:K01443	ko00520,ko01130,map00520,map01130	ko00000,ko00001,ko01000	Belongs to the metallo-dependent hydrolases superfamily. NagA family
APMKGJCD_01880	2.79e-162	yvoA_2	-	-	K	ko:K03710	-	ko00000,ko03000	UbiC transcription regulator-associated domain protein
APMKGJCD_01881	9.21e-120	yfbM	-	-	K	-	-	-	FR47-like protein
APMKGJCD_01882	1.34e-180	tagA	2.4.1.187	GT26	F	ko:K05946	ko05111,map05111	ko00000,ko00001,ko01000,ko01003	Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
APMKGJCD_01883	0.0	pncB	6.3.4.21	-	F	ko:K00763	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
APMKGJCD_01884	9.45e-196	nadE	6.3.1.5	-	F	ko:K01916	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
APMKGJCD_01885	3.12e-95	-	-	-	-	ko:K02029,ko:K02030	-	ko00000,ko00002,ko02000	-
APMKGJCD_01886	0.0	tex	-	-	K	ko:K06959	-	ko00000	Tex-like protein N-terminal domain protein
APMKGJCD_01887	2.19e-22	tex	-	-	K	ko:K06959	-	ko00000	Tex-like protein N-terminal domain protein
APMKGJCD_01888	1.75e-115	ydcK	-	-	S	ko:K03095	-	ko00000	Belongs to the SprT family
APMKGJCD_01889	2.07e-203	thrB	2.7.1.39	-	F	ko:K00872	ko00260,ko01100,ko01110,ko01120,ko01230,map00260,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
APMKGJCD_01891	2.61e-64	-	4.1.1.52, 4.2.1.83	-	E	ko:K07045,ko:K10220,ko:K22213	ko00362,ko01120,map00362,map01120	ko00000,ko00001,ko01000	amidohydrolase
APMKGJCD_01893	9.17e-131	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
APMKGJCD_01894	6.05e-98	-	-	-	K	-	-	-	MarR family
APMKGJCD_01895	3.56e-313	dinF	-	-	V	-	-	-	MatE
APMKGJCD_01896	4.36e-142	-	-	-	S	-	-	-	HAD hydrolase, family IA, variant
APMKGJCD_01897	1.31e-71	levD	2.7.1.191, 2.7.1.202	-	G	ko:K02793,ko:K02794,ko:K11194	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system fructose IIA component
APMKGJCD_01898	1.41e-77	manX	2.7.1.191, 2.7.1.202	-	G	ko:K02769,ko:K02793,ko:K02794	ko00051,ko00520,ko01100,ko01120,ko02060,map00051,map00520,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system sorbose subfamily IIB component
APMKGJCD_01899	1.13e-175	manM	-	-	G	ko:K02746,ko:K02795	ko00051,ko00052,ko00520,ko01100,ko02060,map00051,map00052,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	PTS system
APMKGJCD_01900	1.29e-197	manN	-	-	G	ko:K02796,ko:K02815	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	system, mannose fructose sorbose family IID component
APMKGJCD_01901	4.76e-227	ydbI	-	-	K	-	-	-	AI-2E family transporter
APMKGJCD_01902	3.05e-214	-	-	-	T	-	-	-	diguanylate cyclase
APMKGJCD_01903	9.45e-152	-	-	-	T	-	-	-	Putative diguanylate phosphodiesterase
APMKGJCD_01904	2.02e-131	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
APMKGJCD_01905	0.0	XK27_06930	-	-	V	ko:K01421	-	ko00000	domain protein
APMKGJCD_01906	3.61e-214	psaA	-	-	P	ko:K02077,ko:K11707	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the bacterial solute-binding protein 9 family
APMKGJCD_01907	1.11e-260	brpA	-	-	K	-	-	-	Cell envelope-like function transcriptional attenuator common domain protein
APMKGJCD_01908	5.71e-212	mleP2	-	-	S	ko:K07088	-	ko00000	Transporter, auxin efflux carrier (AEC) family protein
APMKGJCD_01909	5.41e-231	-	-	-	EG	-	-	-	EamA-like transporter family
APMKGJCD_01910	8.39e-159	gpmA	5.4.2.11	-	G	ko:K01834	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
APMKGJCD_01911	5.86e-294	-	-	-	V	-	-	-	Beta-lactamase
APMKGJCD_01912	0.0	pepC	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	Peptidase C1-like family
APMKGJCD_01914	1.63e-163	rpiA	5.3.1.6	-	G	ko:K01807	ko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
APMKGJCD_01915	1.42e-74	-	-	-	-	-	-	-	-
APMKGJCD_01916	2.6e-129	dut	3.6.1.23	-	F	ko:K01520	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	dUTP diphosphatase
APMKGJCD_01917	0.0	radA	-	-	O	ko:K04485	-	ko00000,ko03400	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
APMKGJCD_01918	2.11e-272	yacL	-	-	S	-	-	-	domain protein
APMKGJCD_01919	0.0	gltX	6.1.1.24	-	J	ko:K09698	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
APMKGJCD_01920	0.0	cysS	6.1.1.16	-	J	ko:K01883	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-I aminoacyl-tRNA synthetase family
APMKGJCD_01921	7.28e-92	mrnC	-	-	J	ko:K11145	-	ko00000,ko01000,ko03009	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
APMKGJCD_01922	5.21e-178	trmH	2.1.1.185	-	J	ko:K03218	-	ko00000,ko01000,ko03009	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
APMKGJCD_01923	1.04e-116	yacP	-	-	S	ko:K06962	-	ko00000	YacP-like NYN domain
APMKGJCD_01924	1.37e-129	sigH	-	-	K	ko:K03088,ko:K03091,ko:K12296	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko03000,ko03021	Sigma-70 region 2
APMKGJCD_01925	1.27e-34	secE	-	-	U	ko:K03073	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
APMKGJCD_01926	1.61e-127	nusG	-	-	K	ko:K02601	-	ko00000,ko03009,ko03021	Participates in transcription elongation, termination and antitermination
APMKGJCD_01927	4.14e-94	rplK	-	-	J	ko:K02867	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
APMKGJCD_01928	1.75e-160	rplA	-	-	J	ko:K02863	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
APMKGJCD_01929	1.3e-110	rplJ	-	-	J	ko:K02864	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
APMKGJCD_01930	7.9e-74	rplL	-	-	J	ko:K02935	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
APMKGJCD_01931	4.26e-46	mprF	2.3.2.3	-	S	ko:K14205	ko01503,ko02020,ko05150,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01000,ko01504	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
APMKGJCD_01932	0.0	mprF	2.3.2.3	-	S	ko:K14205	ko01503,ko02020,ko05150,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01000,ko01504	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
APMKGJCD_01933	7.64e-142	yvdD	3.2.2.10	-	S	ko:K06966	ko00230,ko00240,map00230,map00240	ko00000,ko00001,ko01000	Belongs to the LOG family
APMKGJCD_01934	2.44e-109	-	1.1.1.157	-	I	ko:K00074	ko00360,ko00362,ko00650,ko01100,ko01120,map00360,map00362,map00650,map01100,map01120	ko00000,ko00001,ko01000	3-hydroxyacyl-CoA dehydrogenase
APMKGJCD_01935	7.02e-97	-	1.1.1.157	-	I	ko:K00074	ko00360,ko00362,ko00650,ko01100,ko01120,map00360,map00362,map00650,map01100,map01120	ko00000,ko00001,ko01000	3-hydroxyacyl-CoA dehydrogenase
APMKGJCD_01936	4.42e-249	nrdF	1.17.4.1	-	F	ko:K00526	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
APMKGJCD_01937	0.0	nrdE	1.17.4.1	-	F	ko:K00525	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
APMKGJCD_01938	9.51e-51	nrdH	-	-	O	ko:K06191	-	ko00000	Glutaredoxin
APMKGJCD_01939	1.36e-145	rsmC	2.1.1.172	-	J	ko:K00564	-	ko00000,ko01000,ko03009	Methyltransferase
APMKGJCD_01940	2.2e-123	tadA	3.5.4.33	-	F	ko:K11991	-	ko00000,ko01000,ko03016	Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
APMKGJCD_01941	0.0	dnaX	2.7.7.7	-	L	ko:K02343	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
APMKGJCD_01942	6.48e-56	yaaK	-	-	S	ko:K09747	-	ko00000	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
APMKGJCD_01943	2.17e-140	recR	-	-	L	ko:K06187	ko03440,map03440	ko00000,ko00001,ko03400	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
APMKGJCD_01944	2.48e-52	yaaL	-	-	S	-	-	-	Protein of unknown function (DUF2508)
APMKGJCD_01945	2.72e-145	tmk	2.7.4.9	-	F	ko:K00943	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
APMKGJCD_01946	1.44e-72	yaaQ	-	-	S	-	-	-	Cyclic-di-AMP receptor
APMKGJCD_01947	9.74e-231	holB	2.7.7.7	-	L	ko:K02341	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III
APMKGJCD_01948	3.21e-62	yabA	-	-	L	-	-	-	Involved in initiation control of chromosome replication
APMKGJCD_01949	4.05e-210	rsmI	2.1.1.198	-	H	ko:K07056	-	ko00000,ko01000,ko03009	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
APMKGJCD_01950	9.84e-183	fat	3.1.2.21	-	I	ko:K01071	ko00061,ko01100,map00061,map01100	ko00000,ko00001,ko01000,ko01004	Acyl-ACP thioesterase
APMKGJCD_01951	1.01e-163	yeaZ	2.3.1.234	-	O	ko:K01409,ko:K14742	-	ko00000,ko01000,ko03016	Universal bacterial protein YeaZ
APMKGJCD_01952	4.04e-142	rimI	2.3.1.128	-	K	ko:K03789	-	ko00000,ko01000,ko03009	Ribosomal-protein-alanine acetyltransferase
APMKGJCD_01953	1.74e-250	tsaD	2.3.1.234	-	J	ko:K01409	-	ko00000,ko01000,ko03016	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
APMKGJCD_01954	3.26e-275	yycB	-	-	P	ko:K03449	-	ko00000,ko02000	Transporter, major facilitator family protein
APMKGJCD_01955	8.86e-62	-	-	-	K	-	-	-	helix_turn_helix, Arsenical Resistance Operon Repressor
APMKGJCD_01956	0.0	ydiF	-	-	S	ko:K06158	-	ko00000,ko03012	ABC transporter, ATP-binding protein
APMKGJCD_01957	5.69e-147	rex	-	-	K	ko:K01926	-	ko00000,ko03000	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
APMKGJCD_01958	1.56e-60	groS	-	-	O	ko:K04078	-	ko00000,ko03029,ko03110	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
APMKGJCD_01959	0.0	groL	-	-	O	ko:K04077	ko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
APMKGJCD_01960	0.0	ydaO	-	-	E	-	-	-	amino acid
APMKGJCD_01961	1.8e-180	lrgB	-	-	M	ko:K05339	ko02020,map02020	ko00000,ko00001	LrgB-like family
APMKGJCD_01962	1.17e-91	lrgA	-	-	S	ko:K05338	ko02020,map02020	ko00000,ko00001,ko02000	LrgA family
APMKGJCD_01963	6.19e-243	tagO	2.7.8.33, 2.7.8.35	-	M	ko:K02851	-	ko00000,ko01000,ko01003,ko01005	transferase
APMKGJCD_01964	1.75e-149	yvyE	3.4.13.9	-	S	ko:K01271	-	ko00000,ko01000,ko01002	YigZ family
APMKGJCD_01965	4.56e-313	comFA	-	-	L	ko:K02240	-	ko00000,ko00002,ko02044	Helicase C-terminal domain protein
APMKGJCD_01966	8.73e-164	comFC	-	-	S	ko:K02242	-	ko00000,ko00002,ko02044	Competence protein
APMKGJCD_01967	3.5e-126	hpf	-	-	J	ko:K05808	-	ko00000,ko03009	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
APMKGJCD_01968	0.0	secA	-	-	U	ko:K03070	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
APMKGJCD_01969	1.13e-236	prfB	-	-	J	ko:K02836	-	ko00000,ko03012	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
APMKGJCD_01970	1.25e-284	minJ	-	-	O	-	-	-	Domain present in PSD-95, Dlg, and ZO-1/2.
APMKGJCD_01971	2.91e-165	phoP	-	-	K	ko:K07658	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	response regulator
APMKGJCD_01972	0.0	phoR	2.7.13.3	-	T	ko:K07636	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
APMKGJCD_01973	2.25e-207	pstS	-	-	P	ko:K02040	ko02010,ko02020,ko05152,map02010,map02020,map05152	ko00000,ko00001,ko00002,ko02000	Phosphate
APMKGJCD_01974	5.18e-200	pstC	-	-	P	ko:K02037	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	probably responsible for the translocation of the substrate across the membrane
APMKGJCD_01975	1.68e-198	pstA	-	-	P	ko:K02038	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Phosphate transport system permease protein PstA
APMKGJCD_01976	5.46e-194	pstB2	3.6.3.27	-	P	ko:K02036	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
APMKGJCD_01977	6.12e-180	pstB1	3.6.3.27	-	P	ko:K02036	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
APMKGJCD_01978	1.68e-155	phoU	-	-	P	ko:K02039	-	ko00000	Plays a role in the regulation of phosphate uptake
APMKGJCD_01979	5.88e-72	-	-	-	KT	ko:K03973	-	ko00000,ko02048,ko03000	PspC domain protein
APMKGJCD_01980	7.21e-50	yvlD	-	-	S	ko:K08972	-	ko00000	Mycobacterial 4 TMS phage holin, superfamily IV
APMKGJCD_01981	4.08e-219	hprK	-	-	F	ko:K06023	-	ko00000,ko01000	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
APMKGJCD_01982	3.2e-69	lgt	-	-	M	ko:K13292	-	ko00000,ko01000	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
APMKGJCD_01983	1.3e-115	lgt	-	-	M	ko:K13292	-	ko00000,ko01000	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
APMKGJCD_01984	2.14e-234	gpsA	1.1.1.94	-	I	ko:K00057	ko00564,ko01110,map00564,map01110	ko00000,ko00001,ko01000	Glycerol-3-phosphate dehydrogenase
APMKGJCD_01985	1.73e-215	galU	2.7.7.9	-	M	ko:K00963	ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	UTP-glucose-1-phosphate uridylyltransferase
APMKGJCD_01986	1.33e-193	trxB	1.8.1.9	-	C	ko:K00384	ko00450,map00450	ko00000,ko00001,ko01000	Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
APMKGJCD_01987	3.17e-149	yfbR	-	-	S	ko:K07023	-	ko00000	HD containing hydrolase-like enzyme
APMKGJCD_01988	3.05e-121	-	-	-	K	-	-	-	acetyltransferase
APMKGJCD_01989	0.0	uvrB	-	-	L	ko:K03702	ko03420,map03420	ko00000,ko00001,ko03400	damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
APMKGJCD_01990	1.06e-28	uvrA	-	-	L	ko:K03701	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
APMKGJCD_01991	0.0	uvrA	-	-	L	ko:K03701	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
APMKGJCD_01992	2.03e-118	-	-	-	S	-	-	-	Short repeat of unknown function (DUF308)
APMKGJCD_01993	5.33e-211	yvcJ	-	-	S	ko:K06958	-	ko00000,ko03019	Displays ATPase and GTPase activities
APMKGJCD_01994	3.47e-244	yvcK	-	-	S	-	-	-	Required for morphogenesis under gluconeogenic growth conditions
APMKGJCD_01995	4.23e-217	whiA	-	-	K	ko:K09762	-	ko00000	May be required for sporulation
APMKGJCD_01996	2.08e-133	clpP	3.4.21.92	-	O	ko:K01358	ko04112,ko04212,map04112,map04212	ko00000,ko00001,ko01000,ko01002	Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
APMKGJCD_01997	3.75e-98	-	-	-	K	-	-	-	LytTr DNA-binding domain
APMKGJCD_01998	1.88e-162	-	-	-	S	-	-	-	membrane
APMKGJCD_02000	3.44e-139	-	-	-	S	-	-	-	ECF transporter, substrate-specific component
APMKGJCD_02002	8.45e-239	cggR	-	-	K	ko:K05311	-	ko00000,ko03000	Putative sugar-binding domain
APMKGJCD_02003	8.53e-245	gap	1.2.1.12	-	G	ko:K00134	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
APMKGJCD_02004	7.88e-287	pgk	2.7.2.3	-	F	ko:K00927	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the phosphoglycerate kinase family
APMKGJCD_02005	5.46e-179	tpiA	5.3.1.1	-	G	ko:K01803	ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
APMKGJCD_02006	1.89e-316	eno	4.2.1.11	-	G	ko:K01689	ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066	ko00000,ko00001,ko00002,ko01000,ko03019,ko04147	Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
APMKGJCD_02008	0.0	eriC	-	-	P	ko:K03281	-	ko00000	chloride
APMKGJCD_02009	1.06e-44	secG	-	-	U	ko:K03075	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Preprotein translocase
APMKGJCD_02010	3.69e-181	est	3.1.1.1	-	S	ko:K03928	-	ko00000,ko01000	Serine aminopeptidase, S33
APMKGJCD_02011	0.0	rnr	-	-	J	ko:K12573	ko03018,map03018	ko00000,ko00001,ko01000,ko03016,ko03019	3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
APMKGJCD_02012	4.3e-106	smpB	-	-	J	ko:K03664	-	ko00000	the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
APMKGJCD_02013	1.18e-169	glnQ	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
APMKGJCD_02014	2.56e-134	-	-	-	-	-	-	-	-
APMKGJCD_02015	2.24e-180	ung	3.2.2.27	-	L	ko:K03648	ko03410,ko05340,map03410,map05340	ko00000,ko00001,ko01000,ko03400	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
APMKGJCD_02016	4.83e-229	pta	2.3.1.8, 3.6.3.21	-	C	ko:K00625,ko:K02028	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000,ko02000	phosphate acetyltransferase
APMKGJCD_02017	1.34e-109	ydiB	-	-	O	ko:K06925	-	ko00000,ko03016	Hydrolase, P-loop family
APMKGJCD_02018	4.77e-99	-	-	-	J	-	-	-	Acetyltransferase (GNAT) domain
APMKGJCD_02019	8.93e-249	tas3	-	-	C	ko:K19265	-	ko00000,ko01000	Aldo keto reductase family protein
APMKGJCD_02020	7.18e-131	dnaQ	2.7.7.7	-	L	ko:K02342	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III
APMKGJCD_02021	4.03e-195	exoA	3.1.11.2	-	L	ko:K01142	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	exodeoxyribonuclease III
APMKGJCD_02022	2.34e-210	murB	1.3.1.98	-	M	ko:K00075	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation
APMKGJCD_02023	0.0	yvgP	-	-	P	ko:K03316	-	ko00000	Sodium proton antiporter
APMKGJCD_02024	1.34e-158	-	-	-	S	-	-	-	Protein of unknown function (DUF1361)
APMKGJCD_02025	5.67e-196	dacA	2.7.7.85	-	S	ko:K18672	-	ko00000,ko01000	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
APMKGJCD_02026	1.32e-193	ybbR	-	-	S	-	-	-	YbbR-like protein
APMKGJCD_02027	0.0	glmM	5.4.2.10	-	G	ko:K03431	ko00520,ko01100,ko01130,map00520,map01100,map01130	ko00000,ko00001,ko01000	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
APMKGJCD_02028	0.0	glmS	2.6.1.16	-	M	ko:K00820	ko00250,ko00520,ko01100,ko01130,ko04931,map00250,map00520,map01100,map01130,map04931	ko00000,ko00001,ko01000,ko01002	Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
APMKGJCD_02029	3.46e-18	-	-	-	-	-	-	-	-
APMKGJCD_02031	1.34e-109	lytE	-	-	M	-	-	-	NlpC P60 family
APMKGJCD_02032	1.31e-86	yxeI	3.5.1.24	-	M	ko:K01442	ko00120,ko00121,ko01100,map00120,map00121,map01100	ko00000,ko00001,ko01000	Linear amide C-N hydrolase, choloylglycine hydrolase family protein
APMKGJCD_02033	3.42e-123	yxeI	3.5.1.24	-	M	ko:K01442	ko00120,ko00121,ko01100,map00120,map00121,map01100	ko00000,ko00001,ko01000	Linear amide C-N hydrolase, choloylglycine hydrolase family protein
APMKGJCD_02034	5.95e-147	-	-	-	-	-	-	-	-
APMKGJCD_02035	2.29e-128	aad	3.4.13.22	-	E	ko:K08641	ko01502,ko02020,map01502,map02020	ko00000,ko00001,ko00002,ko01000,ko01002,ko01011,ko01504	Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
APMKGJCD_02036	5.64e-144	nnrE	5.1.99.6	-	H	ko:K17759	-	ko00000,ko01000	Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S- specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX
APMKGJCD_02037	1.93e-101	-	-	-	K	ko:K06075	-	ko00000,ko03000	Winged helix DNA-binding domain
APMKGJCD_02038	3.56e-68	-	-	-	-	-	-	-	-
APMKGJCD_02040	6.65e-269	-	-	-	S	ko:K15051	-	ko00000	DNA/RNA non-specific endonuclease
APMKGJCD_02041	5.02e-29	-	-	-	S	-	-	-	SEC-C Motif Domain Protein
APMKGJCD_02043	0.0	brnQ	-	-	U	ko:K03311	-	ko00000	Component of the transport system for branched-chain amino acids
APMKGJCD_02044	0.0	-	-	-	E	-	-	-	Amino acid permease
APMKGJCD_02045	3.43e-204	nanK	-	-	GK	-	-	-	ROK family
APMKGJCD_02046	0.0	brnQ	-	-	U	ko:K03311	-	ko00000	Component of the transport system for branched-chain amino acids
APMKGJCD_02047	2.21e-253	-	-	-	S	-	-	-	DUF218 domain
APMKGJCD_02048	1.86e-210	-	-	-	-	-	-	-	-
APMKGJCD_02049	9.09e-97	-	-	-	K	-	-	-	Transcriptional regulator
APMKGJCD_02050	0.0	pepF2	-	-	E	-	-	-	Oligopeptidase F
APMKGJCD_02051	9.03e-229	ybcH	-	-	D	ko:K06889	-	ko00000	Alpha beta
APMKGJCD_02052	1.9e-164	-	-	-	S	-	-	-	Protein of unknown function (DUF1275)
APMKGJCD_02053	0.0	cpdB	-	-	S	ko:K18682	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	Endoribonuclease that initiates mRNA decay
APMKGJCD_02054	4.45e-315	rarA	-	-	L	ko:K07478	-	ko00000	recombination factor protein RarA
APMKGJCD_02055	3.32e-203	-	-	-	C	-	-	-	Aldo keto reductase
APMKGJCD_02056	5.72e-283	xylR	-	-	GK	-	-	-	ROK family
APMKGJCD_02057	3.68e-171	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
APMKGJCD_02058	3.41e-177	XK27_00890	-	-	S	ko:K08974	-	ko00000	Domain of unknown function (DUF368)
APMKGJCD_02059	7.85e-102	-	-	-	P	ko:K03284	-	ko00000,ko02000	CorA-like Mg2+ transporter protein
APMKGJCD_02060	3.65e-35	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
APMKGJCD_02062	5.53e-43	-	-	-	-	-	-	-	-
APMKGJCD_02066	7.04e-118	-	-	-	-	-	-	-	-
APMKGJCD_02067	0.0	rumA_1	2.1.1.190, 2.1.1.35	-	J	ko:K00557,ko:K03215	-	ko00000,ko01000,ko03009,ko03016	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
APMKGJCD_02068	2.93e-151	ybbL	-	-	S	ko:K02068	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
APMKGJCD_02069	2.26e-166	yjkA	-	-	S	ko:K02069	-	ko00000,ko00002,ko02000	Uncharacterised protein family (UPF0014)
APMKGJCD_02070	1.01e-191	yneD	-	-	S	-	-	-	Enoyl-(Acyl carrier protein) reductase
APMKGJCD_02071	4.25e-176	thiM	2.7.1.50	-	H	ko:K00878	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
APMKGJCD_02072	2.91e-190	thiD	2.7.1.49, 2.7.4.7	-	H	ko:K00941	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Phosphomethylpyrimidine kinase
APMKGJCD_02073	9.74e-146	thiE	2.5.1.3	-	H	ko:K00788	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)
APMKGJCD_02074	2.81e-44	-	-	-	V	ko:K02003,ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
APMKGJCD_02075	1.71e-287	-	-	-	V	ko:K02003,ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
APMKGJCD_02076	2.64e-83	polYB	2.7.7.7	-	L	ko:K02346,ko:K03502	-	ko00000,ko01000,ko03400	Belongs to the DNA polymerase type-Y family
APMKGJCD_02077	3.78e-122	polYB	2.7.7.7	-	L	ko:K02346,ko:K03502	-	ko00000,ko01000,ko03400	Belongs to the DNA polymerase type-Y family
APMKGJCD_02078	7.36e-74	-	-	-	-	-	-	-	-
APMKGJCD_02079	1.24e-86	-	-	-	-	-	-	-	-
APMKGJCD_02080	3.57e-260	-	-	-	-	-	-	-	-
APMKGJCD_02081	6.58e-130	-	-	-	K	-	-	-	DNA-templated transcription, initiation
APMKGJCD_02082	3.42e-37	-	-	-	-	-	-	-	-
APMKGJCD_02084	1.79e-213	-	-	-	K	-	-	-	LysR substrate binding domain
APMKGJCD_02085	1.23e-286	-	-	-	EK	-	-	-	Aminotransferase, class I
APMKGJCD_02086	7.42e-114	-	-	-	-	-	-	-	-
APMKGJCD_02087	4.33e-89	-	-	-	-	-	-	-	-
APMKGJCD_02088	0.0	-	-	-	-	-	-	-	-
APMKGJCD_02089	6.4e-149	-	-	-	-	-	-	-	-
APMKGJCD_02091	2.61e-83	-	-	-	K	-	-	-	HxlR-like helix-turn-helix
APMKGJCD_02092	6.01e-54	-	-	-	-	-	-	-	-
APMKGJCD_02093	1.3e-124	-	-	-	-	-	-	-	-
APMKGJCD_02094	2.39e-59	-	-	-	-	-	-	-	-
APMKGJCD_02095	6.14e-147	-	-	-	GM	-	-	-	NmrA-like family
APMKGJCD_02096	1.46e-198	-	5.4.2.7	-	G	ko:K01839	ko00030,ko00230,map00030,map00230	ko00000,ko00001,ko01000	Metalloenzyme superfamily
APMKGJCD_02097	1.8e-288	nupG	-	-	F	ko:K16323	-	ko00000,ko02000	Nucleoside
APMKGJCD_02098	7.77e-283	pbuO_1	-	-	S	ko:K06901	-	ko00000,ko02000	Permease family
APMKGJCD_02099	5.58e-218	rihA	3.2.2.1	-	F	ko:K01239,ko:K01250,ko:K12700	ko00230,ko00760,ko01100,map00230,map00760,map01100	ko00000,ko00001,ko01000	Nucleoside
APMKGJCD_02100	1.73e-213	-	3.1.4.17, 3.1.4.53	-	S	ko:K01120,ko:K03651	ko00230,ko02025,map00230,map02025	ko00000,ko00001,ko01000	Calcineurin-like phosphoesterase
APMKGJCD_02101	2.3e-170	rsmG	2.1.1.170	-	J	ko:K03501	-	ko00000,ko01000,ko03009,ko03036	Specifically methylates the N7 position of a guanine in 16S rRNA
APMKGJCD_02102	1.18e-190	noc	-	-	K	ko:K03497	-	ko00000,ko03000,ko03036,ko04812	Belongs to the ParB family
APMKGJCD_02103	3.52e-176	soj	-	-	D	ko:K03496	-	ko00000,ko03036,ko04812	Sporulation initiation inhibitor
APMKGJCD_02104	1.02e-199	spo0J	-	-	K	ko:K03497	-	ko00000,ko03000,ko03036,ko04812	Belongs to the ParB family
APMKGJCD_02105	1.15e-43	yyzM	-	-	S	-	-	-	Bacterial protein of unknown function (DUF951)
APMKGJCD_02106	1.62e-255	ychF	-	-	J	ko:K06942	-	ko00000,ko03009	ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
APMKGJCD_02107	2.48e-170	-	-	-	S	-	-	-	Protein of unknown function (DUF1129)
APMKGJCD_02108	3.1e-138	-	-	-	-	-	-	-	-
APMKGJCD_02109	4.95e-268	guaB	1.1.1.205	-	F	ko:K00088	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
APMKGJCD_02110	4.64e-159	vanR	-	-	K	-	-	-	response regulator
APMKGJCD_02111	1.68e-275	hpk31	-	-	T	-	-	-	Histidine kinase
APMKGJCD_02112	8.91e-306	dacA	3.4.16.4	-	M	ko:K07258	ko00550,ko01100,map00550,map01100	ko00000,ko00001,ko01000,ko01002,ko01011	Belongs to the peptidase S11 family
APMKGJCD_02113	4.55e-221	yhgE	-	-	V	ko:K01421	-	ko00000	domain protein
APMKGJCD_02114	0.0	gshR3	1.8.1.7	-	C	ko:K00383	ko00480,ko04918,map00480,map04918	ko00000,ko00001,ko01000	Glutathione reductase
APMKGJCD_02115	1.08e-112	ywnH	2.3.1.183	-	M	ko:K03823	ko00440,ko01130,map00440,map01130	ko00000,ko00001,ko01000	Acetyltransferase (GNAT) domain
APMKGJCD_02116	2.86e-176	azlC	-	-	E	-	-	-	AzlC protein
APMKGJCD_02117	1.3e-71	-	-	-	S	-	-	-	branched-chain amino acid
APMKGJCD_02118	3.99e-303	cfa	2.1.1.79	-	M	ko:K00574	-	ko00000,ko01000	cyclopropane-fatty-acyl-phospholipid synthase
APMKGJCD_02119	4.72e-168	-	-	-	-	-	-	-	-
APMKGJCD_02120	1.37e-273	xylR	-	-	GK	-	-	-	ROK family
APMKGJCD_02121	1.26e-105	ydbI	-	-	K	-	-	-	AI-2E family transporter
APMKGJCD_02122	2.33e-104	ydbI	-	-	K	-	-	-	AI-2E family transporter
APMKGJCD_02123	0.0	-	-	-	M	-	-	-	domain protein
APMKGJCD_02124	3.05e-169	gpmA	5.4.2.11	-	G	ko:K01834	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
APMKGJCD_02125	1.17e-110	yafP	-	-	K	ko:K03830	-	ko00000,ko01000	Acetyltransferase (GNAT) domain
APMKGJCD_02126	4.28e-53	-	-	-	-	-	-	-	-
APMKGJCD_02127	5.12e-51	-	-	-	S	-	-	-	Protein of unknown function (DUF3781)
APMKGJCD_02128	2.31e-283	-	-	-	U	-	-	-	Belongs to the major facilitator superfamily
APMKGJCD_02129	1.08e-217	-	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Tyrosine phosphatase family
APMKGJCD_02130	2.16e-136	-	3.5.1.124	-	S	ko:K03152	-	ko00000,ko01000,ko01002	DJ-1/PfpI family
APMKGJCD_02131	2.74e-265	-	-	-	-	-	-	-	-
APMKGJCD_02133	1.12e-45	arcT	-	-	E	-	-	-	Dipeptidase
APMKGJCD_02134	1.05e-164	XK27_07210	-	-	S	-	-	-	B3 4 domain
APMKGJCD_02135	2.27e-85	lysM	-	-	M	-	-	-	LysM domain
APMKGJCD_02136	1.54e-124	laaE	-	-	K	-	-	-	Transcriptional regulator PadR-like family
APMKGJCD_02137	4.16e-227	-	-	-	U	-	-	-	Major Facilitator Superfamily
APMKGJCD_02138	0.0	asnS	6.1.1.22	-	J	ko:K01893	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Asparaginyl-tRNA synthetase
APMKGJCD_02139	5.64e-202	-	-	-	-	-	-	-	-
APMKGJCD_02140	4.26e-45	-	-	-	S	-	-	-	Transglycosylase associated protein
APMKGJCD_02141	1.23e-119	-	-	-	-	-	-	-	-
APMKGJCD_02142	1.02e-34	-	-	-	-	-	-	-	-
APMKGJCD_02143	4.16e-93	-	-	-	S	-	-	-	Asp23 family, cell envelope-related function
APMKGJCD_02144	5.5e-83	asp2	-	-	S	-	-	-	Asp23 family, cell envelope-related function
APMKGJCD_02145	3e-86	-	-	-	K	-	-	-	HxlR-like helix-turn-helix
APMKGJCD_02146	5.65e-171	-	-	-	S	-	-	-	KR domain
APMKGJCD_02147	2.96e-147	-	-	-	-	-	-	-	-
APMKGJCD_02148	7.26e-202	map	3.4.11.18	-	E	ko:K01265	-	ko00000,ko01000,ko01002	Methionine Aminopeptidase
APMKGJCD_02149	3.03e-188	-	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
APMKGJCD_02150	1.41e-264	-	-	-	EGP	ko:K02030,ko:K07552	-	ko00000,ko00002,ko02000	Drug resistance transporter Bcr CflA subfamily
APMKGJCD_02151	1.19e-112	gpo	1.11.1.9	-	O	ko:K00432	ko00480,ko00590,ko04918,map00480,map00590,map04918	ko00000,ko00001,ko01000	Belongs to the glutathione peroxidase family
APMKGJCD_02152	1.61e-225	-	3.5.2.6	-	V	ko:K17836	ko00311,ko01130,ko01501,map00311,map01130,map01501	ko00000,ko00001,ko00002,ko01000,ko01504	Beta-lactamase enzyme family
APMKGJCD_02153	2.63e-82	lexA	-	-	K	ko:K07979	-	ko00000,ko03000	Transcriptional regulator, GntR family
APMKGJCD_02154	4.11e-161	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
APMKGJCD_02155	3.47e-165	-	-	-	-	-	-	-	-
APMKGJCD_02156	7.14e-183	-	-	-	T	-	-	-	Tyrosine phosphatase family
APMKGJCD_02157	3.4e-51	-	-	-	S	ko:K07090	-	ko00000	membrane transporter protein
APMKGJCD_02158	2.62e-89	-	-	-	L	ko:K07483,ko:K07497	-	ko00000	Helix-turn-helix domain
APMKGJCD_02160	1.11e-122	-	-	-	I	-	-	-	NUDIX domain
APMKGJCD_02161	1.4e-147	yviA	-	-	S	-	-	-	Protein of unknown function (DUF421)
APMKGJCD_02162	1.79e-96	-	-	-	S	-	-	-	Protein of unknown function (DUF3290)
APMKGJCD_02163	4.57e-212	ropB	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
APMKGJCD_02164	1.1e-278	-	-	-	EGP	-	-	-	Transmembrane secretion effector
APMKGJCD_02165	0.0	gshR	1.8.1.7	-	C	ko:K00383	ko00480,ko04918,map00480,map04918	ko00000,ko00001,ko01000	Glutathione reductase
APMKGJCD_02166	2.98e-49	ygbF	-	-	S	-	-	-	Sugar efflux transporter for intercellular exchange
APMKGJCD_02168	2.14e-260	napA	-	-	P	-	-	-	Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
APMKGJCD_02169	1.54e-47	-	-	-	-	-	-	-	-
APMKGJCD_02170	9.4e-178	-	-	-	G	-	-	-	Xylose isomerase domain protein TIM barrel
APMKGJCD_02171	2.26e-294	gntT	-	-	EG	-	-	-	Citrate transporter
APMKGJCD_02172	1.38e-226	kdgK	2.7.1.45	-	G	ko:K00874	ko00030,ko01100,ko01120,ko01200,map00030,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	pfkB family carbohydrate kinase
APMKGJCD_02173	5.45e-138	-	4.1.2.43	-	G	ko:K08093	ko00030,ko00680,ko01100,ko01120,ko01200,ko01230,map00030,map00680,map01100,map01120,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Orotidine 5'-phosphate decarboxylase HUMPS family
APMKGJCD_02174	2.02e-113	hxlB	5.3.1.27	-	M	ko:K08094	ko00030,ko00680,ko01100,ko01120,ko01200,ko01230,map00030,map00680,map01100,map01120,map01200,map01230	ko00000,ko00001,ko00002,ko01000	sugar phosphate isomerase involved in capsule formation
APMKGJCD_02175	2.57e-226	kdgR	-	-	K	ko:K02525	-	ko00000,ko03000	helix_turn _helix lactose operon repressor
APMKGJCD_02176	3.57e-72	-	-	-	-	-	-	-	-
APMKGJCD_02177	1.99e-109	-	-	-	-	-	-	-	-
APMKGJCD_02178	0.0	-	-	-	L	-	-	-	DNA helicase
APMKGJCD_02180	1.16e-243	trpS	6.1.1.2	-	J	ko:K01867	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-I aminoacyl-tRNA synthetase family
APMKGJCD_02181	1.08e-216	ppx	3.6.1.11, 3.6.1.40	-	FP	ko:K01524	ko00230,map00230	ko00000,ko00001,ko01000	exopolyphosphatase
APMKGJCD_02182	4.02e-283	mvaA	1.1.1.88, 2.3.1.9	-	C	ko:K00054,ko:K00626	ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the HMG-CoA reductase family
APMKGJCD_02183	1.56e-228	-	-	-	-	-	-	-	-
APMKGJCD_02184	1.69e-167	cobB	-	-	K	ko:K12410	-	ko00000,ko01000	SIR2 family
APMKGJCD_02185	8.41e-67	-	-	-	-	-	-	-	-
APMKGJCD_02186	6.98e-205	yunF	-	-	F	-	-	-	Protein of unknown function DUF72
APMKGJCD_02187	0.0	metG	6.1.1.10	-	J	ko:K01874	ko00450,ko00970,map00450,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
APMKGJCD_02188	1.63e-187	tatD	-	-	L	ko:K03424	-	ko00000,ko01000	hydrolase, TatD family
APMKGJCD_02189	9.98e-128	rnmV	3.1.26.8	-	J	ko:K05985	-	ko00000,ko01000	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
APMKGJCD_02190	4.9e-208	ksgA	2.1.1.182	-	J	ko:K02528	-	ko00000,ko01000,ko03009	Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
APMKGJCD_02191	1.14e-48	veg	-	-	S	-	-	-	Biofilm formation stimulator VEG
APMKGJCD_02192	3.2e-207	ispE	2.7.1.148	-	F	ko:K00919,ko:K16924	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko02000	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
APMKGJCD_02193	3.94e-144	ung2	-	-	L	-	-	-	Uracil-DNA glycosylase
APMKGJCD_02194	0.0	yicI	3.2.1.177	GH31	G	ko:K01811	-	ko00000,ko01000	Belongs to the glycosyl hydrolase 31 family
APMKGJCD_02195	0.0	xylP	-	-	G	ko:K03292	-	ko00000	MFS/sugar transport protein
APMKGJCD_02196	1.21e-267	xylR	-	-	GK	-	-	-	ROK family
APMKGJCD_02197	0.0	bglA	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
APMKGJCD_02198	4.21e-213	ypbG	2.7.1.2	-	GK	ko:K00845	ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	ROK family
APMKGJCD_02199	2.88e-118	-	-	-	-	-	-	-	-
APMKGJCD_02201	3.13e-70	-	-	-	V	ko:K01992	-	ko00000,ko00002,ko02000	Transport permease protein
APMKGJCD_02202	1.64e-114	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter
APMKGJCD_02203	1.31e-106	-	-	-	KTV	ko:K01990	-	ko00000,ko00002,ko02000	abc transporter atp-binding protein
APMKGJCD_02204	2.31e-214	-	-	-	S	ko:K06889	-	ko00000	Prolyl oligopeptidase family
APMKGJCD_02205	9.27e-219	psaA	-	-	P	ko:K02077,ko:K11707	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the bacterial solute-binding protein 9 family
APMKGJCD_02206	1.02e-168	adcC	-	-	P	ko:K02074,ko:K09817,ko:K11710	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter
APMKGJCD_02207	2.09e-173	znuB	-	-	U	ko:K02075,ko:K09816	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC 3 transport family
APMKGJCD_02209	4.16e-185	purR	-	-	F	ko:K09685	-	ko00000,ko03000	pur operon repressor
APMKGJCD_02210	7.66e-308	glmU	2.3.1.157, 2.7.7.23	-	M	ko:K04042	ko00520,ko01100,ko01130,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
APMKGJCD_02211	2.8e-229	prs	2.7.6.1	-	F	ko:K00948	ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
APMKGJCD_02212	9e-74	-	-	-	S	-	-	-	Domain of unknown function (DUF3899)
APMKGJCD_02213	1.15e-94	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
APMKGJCD_02214	3.81e-169	gntR	-	-	K	-	-	-	UbiC transcription regulator-associated domain protein
APMKGJCD_02215	0.0	xpkA	4.1.2.22, 4.1.2.9	-	G	ko:K01621	ko00030,ko00710,ko01100,ko01120,map00030,map00710,map01100,map01120	ko00000,ko00001,ko01000	Phosphoketolase
APMKGJCD_02216	1.17e-182	yxeH	-	-	S	-	-	-	hydrolase
APMKGJCD_02217	0.0	ywfO	-	-	S	ko:K06885	-	ko00000	HD domain protein
APMKGJCD_02218	1.56e-191	lipL	2.3.1.200, 2.3.1.204	-	H	ko:K16869,ko:K18821	-	ko00000,ko01000	biotin lipoate A B protein ligase
APMKGJCD_02219	1.22e-102	ywiB	-	-	S	-	-	-	Domain of unknown function (DUF1934)
APMKGJCD_02220	3.8e-78	rpoE	-	-	K	ko:K03048	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko03021,ko03400	Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
APMKGJCD_02221	0.0	pyrG	6.3.4.2	-	F	ko:K01937	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
APMKGJCD_02222	0.0	-	-	-	S	-	-	-	Leucine-rich repeat (LRR) protein
APMKGJCD_02223	1.86e-228	-	-	-	-	-	-	-	-
APMKGJCD_02224	2.41e-51	-	-	-	-	-	-	-	-
APMKGJCD_02225	4.67e-95	-	-	-	K	-	-	-	Transcriptional regulator
APMKGJCD_02226	0.0	spxB	1.2.3.3, 1.2.5.1, 2.2.1.6, 4.1.1.8	-	EH	ko:K00156,ko:K00158,ko:K01577,ko:K01652	ko00290,ko00620,ko00630,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00620,map00630,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the TPP enzyme family
APMKGJCD_02227	1.44e-166	budA	4.1.1.5	-	H	ko:K01575	ko00650,ko00660,map00650,map00660	ko00000,ko00001,ko01000	Belongs to the alpha-acetolactate decarboxylase family
APMKGJCD_02228	1.96e-18	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
APMKGJCD_02229	0.0	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
APMKGJCD_02230	1.21e-302	murA	2.5.1.7	-	M	ko:K00790	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
APMKGJCD_02231	3.24e-57	rpmE2	-	-	J	ko:K02909	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L31
APMKGJCD_02232	8.23e-157	srtA	3.4.22.70	-	M	ko:K07284	-	ko00000,ko01000,ko01002,ko01011	sortase family
APMKGJCD_02236	2.48e-79	-	-	-	S	-	-	-	Leucine-rich repeat (LRR) protein
APMKGJCD_02240	3.13e-46	-	-	-	S	-	-	-	WxL domain surface cell wall-binding
APMKGJCD_02241	1.59e-140	-	-	-	S	-	-	-	Cell surface protein
APMKGJCD_02242	6.23e-127	XK27_00720	-	-	S	ko:K13730	ko05100,map05100	ko00000,ko00001	regulation of response to stimulus
APMKGJCD_02243	8.44e-315	-	-	-	S	-	-	-	Leucine-rich repeat (LRR) protein
APMKGJCD_02244	4.67e-114	ptpA	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
APMKGJCD_02245	2.17e-127	lemA	-	-	S	ko:K03744	-	ko00000	LemA family
APMKGJCD_02246	6.57e-198	htpX	-	-	O	ko:K03799	-	ko00000,ko00002,ko01000,ko01002	Belongs to the peptidase M48B family
APMKGJCD_02247	1.91e-192	-	-	-	-	-	-	-	-
APMKGJCD_02248	0.0	murF	6.3.2.10	-	M	ko:K01929	ko00300,ko00550,ko01100,ko01502,map00300,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
APMKGJCD_02249	0.0	cshA	3.6.4.13	-	F	ko:K05592	ko03018,map03018	ko00000,ko00001,ko01000,ko03009,ko03019	DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
APMKGJCD_02250	1.23e-273	-	-	-	S	-	-	-	nuclear-transcribed mRNA catabolic process, no-go decay
APMKGJCD_02251	9.61e-84	acpS	2.7.8.7	-	I	ko:K00997	ko00770,map00770	ko00000,ko00001,ko01000	Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
APMKGJCD_02252	1.74e-274	alr	5.1.1.1	-	E	ko:K01775	ko00473,ko01100,ko01502,map00473,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
APMKGJCD_02254	1.45e-80	ndoA	-	-	L	ko:K07171	-	ko00000,ko01000,ko02048	Toxic component of a toxin-antitoxin (TA) module
APMKGJCD_02255	7.47e-148	-	-	-	S	-	-	-	(CBS) domain
APMKGJCD_02257	0.0	-	-	-	S	-	-	-	Putative peptidoglycan binding domain
APMKGJCD_02258	5.62e-225	ldh	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	Belongs to the LDH MDH superfamily. LDH family
APMKGJCD_02259	1.28e-132	pth	3.1.1.29	-	J	ko:K01056	-	ko00000,ko01000,ko03012	The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
APMKGJCD_02260	0.0	mfd	-	-	L	ko:K03723	ko03420,map03420	ko00000,ko00001,ko01000,ko03400	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
APMKGJCD_02261	0.0	yabM	-	-	S	ko:K03328	-	ko00000	Polysaccharide biosynthesis protein
APMKGJCD_02262	7.09e-53	yabO	-	-	J	-	-	-	S4 domain protein
APMKGJCD_02263	2.21e-28	divIC	-	-	D	ko:K13052	-	ko00000,ko03036	Septum formation initiator
APMKGJCD_02264	4.64e-124	yabR	-	-	J	ko:K07571	-	ko00000	RNA binding
APMKGJCD_02265	0.0	tilS	2.4.2.8, 6.3.4.19	-	J	ko:K04075,ko:K15780	ko00230,ko01100,ko01110,map00230,map01100,map01110	ko00000,ko00001,ko01000,ko03016	Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
APMKGJCD_02266	5.23e-125	hpt	2.4.2.8	-	F	ko:K00760	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the purine pyrimidine phosphoribosyltransferase family
APMKGJCD_02267	0.0	ftsH	-	-	O	ko:K03798	-	ko00000,ko00002,ko01000,ko01002,ko03110	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
APMKGJCD_02268	2.74e-209	hslO	-	-	O	ko:K04083	-	ko00000,ko03110	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
APMKGJCD_02269	3.38e-123	dus	-	-	J	ko:K05540	-	ko00000,ko01000,ko03016	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
APMKGJCD_02270	1.13e-108	dus	-	-	J	ko:K05540	-	ko00000,ko01000,ko03016	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
APMKGJCD_02272	5.2e-108	rlmH	2.1.1.177	-	J	ko:K00783	-	ko00000,ko01000,ko03009	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
APMKGJCD_02273	1.03e-274	htrA	3.4.21.107	-	O	ko:K04771	ko01503,ko02020,map01503,map02020	ko00000,ko00001,ko00002,ko01000,ko01002,ko03110	serine protease
APMKGJCD_02274	2.33e-200	vicX	3.1.26.11	-	S	ko:K00784	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	domain protein
APMKGJCD_02275	3.54e-195	yycI	-	-	S	-	-	-	YycH protein
APMKGJCD_02276	4.78e-307	yycH	-	-	S	-	-	-	YycH protein
APMKGJCD_02277	4.83e-70	vicK	2.7.13.3	-	T	ko:K07652	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
APMKGJCD_02278	0.0	vicK	2.7.13.3	-	T	ko:K07652	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
APMKGJCD_02279	1.19e-170	yycF	-	-	K	ko:K07668	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	response regulator
APMKGJCD_02281	2.67e-166	-	-	-	E	-	-	-	Matrixin
APMKGJCD_02282	1.43e-52	-	-	-	-	-	-	-	-
APMKGJCD_02283	0.0	oppA	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
APMKGJCD_02284	1.18e-37	-	-	-	-	-	-	-	-
APMKGJCD_02285	1.82e-270	yttB	-	-	EGP	-	-	-	Major Facilitator
APMKGJCD_02286	7.2e-130	-	-	-	S	-	-	-	NADPH-dependent FMN reductase
APMKGJCD_02287	0.0	dnaB	3.6.4.12	-	L	ko:K02314	ko03030,ko04112,map03030,map04112	ko00000,ko00001,ko01000,ko03032	Participates in initiation and elongation during chromosome replication
APMKGJCD_02289	2.22e-92	rplI	-	-	J	ko:K02939	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to the 23S rRNA
APMKGJCD_02290	0.0	yybT	-	-	T	-	-	-	signaling protein consisting of a modified GGDEF domain and a DHH domain
APMKGJCD_02291	1.96e-93	-	-	-	S	ko:K07090	-	ko00000	membrane transporter protein
APMKGJCD_02292	8.93e-130	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
APMKGJCD_02293	0.0	oppA	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
APMKGJCD_02294	2.37e-294	-	-	-	Q	-	-	-	Imidazolonepropionase and related amidohydrolases
APMKGJCD_02295	9.06e-185	-	-	-	-	-	-	-	-
APMKGJCD_02296	0.0	oppA	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
APMKGJCD_02297	2.68e-296	-	-	-	Q	-	-	-	Imidazolonepropionase and related amidohydrolases
APMKGJCD_02298	1.33e-47	rpsR	-	-	J	ko:K02963	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
APMKGJCD_02299	5.15e-104	ssb	-	-	L	ko:K03111	ko03030,ko03430,ko03440,map03030,map03430,map03440	ko00000,ko00001,ko03029,ko03032,ko03400	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
APMKGJCD_02300	1.36e-65	rpsF	-	-	J	ko:K02990	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Binds together with S18 to 16S ribosomal RNA
APMKGJCD_02301	0.0	gyrA	5.99.1.3	-	L	ko:K02469	-	ko00000,ko01000,ko03032,ko03400	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
APMKGJCD_02302	0.0	gyrB	5.99.1.3	-	L	ko:K02470	-	ko00000,ko01000,ko03032,ko03400	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
APMKGJCD_02303	2.66e-270	recF	-	-	L	ko:K03629	ko03440,map03440	ko00000,ko00001,ko03400	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
APMKGJCD_02304	9.18e-49	yaaA	-	-	S	ko:K14761	-	ko00000,ko03009	S4 domain protein YaaA
APMKGJCD_02305	2.74e-265	dnaN	2.7.7.7	-	L	ko:K02338	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
APMKGJCD_02306	0.0	dnaA	-	-	L	ko:K02313	ko02020,ko04112,map02020,map04112	ko00000,ko00001,ko03032,ko03036	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
APMKGJCD_02307	1.61e-20	rpmH	-	-	J	ko:K02914	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL34 family
APMKGJCD_02308	9.04e-78	rnpA	3.1.26.5	-	J	ko:K03536	-	ko00000,ko01000,ko03016	RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
APMKGJCD_02309	1.67e-185	yidC	-	-	U	ko:K03217	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044,ko03029	Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
APMKGJCD_02310	2.25e-149	jag	-	-	S	ko:K06346	-	ko00000	R3H domain protein
APMKGJCD_02311	0.0	mnmE	-	-	S	ko:K03650	-	ko00000,ko01000,ko03016	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
APMKGJCD_02312	0.0	gidA	-	-	D	ko:K03495	-	ko00000,ko03016,ko03036	NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
APMKGJCD_02313	1.89e-82	-	-	-	-	-	-	-	-
APMKGJCD_02314	1.18e-50	-	-	-	-	-	-	-	-
APMKGJCD_02315	1.76e-162	yfnB	3.8.1.2	-	S	ko:K01560,ko:K07025	ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120	ko00000,ko00001,ko01000	HAD-hyrolase-like
APMKGJCD_02316	5.5e-51	-	-	-	-	-	-	-	-
APMKGJCD_02317	8.07e-314	brnQ	-	-	U	ko:K03311	-	ko00000	Component of the transport system for branched-chain amino acids
APMKGJCD_02318	1.29e-149	-	-	-	S	ko:K07118	-	ko00000	NAD(P)H-binding
APMKGJCD_02319	4.33e-127	-	-	-	J	-	-	-	Acetyltransferase (GNAT) domain
APMKGJCD_02320	2.51e-120	ykhA	3.1.2.20	-	I	ko:K01073	-	ko00000,ko01000	Thioesterase superfamily
APMKGJCD_02321	5.8e-290	-	-	-	S	-	-	-	module of peptide synthetase
APMKGJCD_02322	1.9e-278	tcaB	-	-	EGP	ko:K07552	-	ko00000,ko02000	Drug resistance transporter Bcr CflA subfamily
APMKGJCD_02323	3.92e-141	sip3	3.4.21.89	-	U	ko:K03100	ko02024,ko03060,map02024,map03060	ko00000,ko00001,ko01000,ko01002	Belongs to the peptidase S26 family
APMKGJCD_02324	3.29e-104	-	-	-	K	-	-	-	helix_turn_helix multiple antibiotic resistance protein
APMKGJCD_02325	0.0	pepE	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	aminopeptidase
APMKGJCD_02326	1.34e-146	nt5e	3.1.3.18	-	L	ko:K01091	ko00630,ko01100,ko01110,ko01130,map00630,map01100,map01110,map01130	ko00000,ko00001,ko01000	haloacid dehalogenase-like hydrolase
APMKGJCD_02327	1.06e-68	-	-	-	-	-	-	-	-
APMKGJCD_02330	8.3e-117	-	-	-	-	-	-	-	-
APMKGJCD_02331	1.69e-193	-	-	-	F	ko:K15051	-	ko00000	DNA/RNA non-specific endonuclease
APMKGJCD_02332	2.12e-30	-	-	-	-	-	-	-	-
APMKGJCD_02333	0.0	cls	-	-	I	ko:K06131	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
APMKGJCD_02334	1.04e-216	rhaS2	-	-	K	-	-	-	Transcriptional regulator, AraC family
APMKGJCD_02335	0.0	-	-	-	G	ko:K03292	-	ko00000	MFS/sugar transport protein
APMKGJCD_02336	0.0	xynB	3.2.1.37	GH43	G	ko:K01198	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 43 family
APMKGJCD_02337	0.0	-	-	-	S	-	-	-	Predicted membrane protein (DUF2207)
APMKGJCD_02340	9.8e-113	ccl	-	-	S	-	-	-	QueT transporter
APMKGJCD_02341	0.0	yfhO	-	-	S	-	-	-	Bacterial membrane protein YfhO
APMKGJCD_02342	1.31e-216	-	2.5.1.74	-	H	ko:K02548	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01006	UbiA prenyltransferase family
APMKGJCD_02343	1.93e-170	drrB	-	-	U	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 type transporter
APMKGJCD_02344	1.46e-212	drrA	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter
APMKGJCD_02345	8.73e-122	-	-	-	K	-	-	-	helix_turn_helix multiple antibiotic resistance protein
APMKGJCD_02346	2.46e-290	pbuG	-	-	S	ko:K06901	-	ko00000,ko02000	permease
APMKGJCD_02347	6.64e-233	iolS	-	-	C	ko:K06607	-	ko00000,ko01000	Aldo keto reductase
APMKGJCD_02348	1.58e-133	-	-	-	GM	-	-	-	NAD(P)H-binding
APMKGJCD_02349	3.66e-77	-	-	-	-	-	-	-	-
APMKGJCD_02350	1.26e-242	-	-	-	L	ko:K07482	-	ko00000	Helix-turn-helix domain
APMKGJCD_02351	1.57e-236	pgdA	3.5.1.104	-	G	ko:K22278	-	ko00000,ko01000	polysaccharide deacetylase
APMKGJCD_02352	3.82e-277	-	3.5.1.18	-	E	ko:K01439	ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000	succinyl-diaminopimelate desuccinylase
APMKGJCD_02353	0.0	rexB	3.6.4.12	-	L	ko:K16899	-	ko00000,ko01000,ko03400	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
APMKGJCD_02354	0.0	addA	3.6.4.12	-	L	ko:K16898	-	ko00000,ko01000,ko03400	ATP-dependent helicase nuclease subunit A
APMKGJCD_02355	3.48e-215	-	-	-	-	-	-	-	-
APMKGJCD_02356	5.05e-184	-	-	-	K	-	-	-	Helix-turn-helix domain
APMKGJCD_02358	5.44e-99	-	-	-	M	-	-	-	domain protein
APMKGJCD_02359	6.09e-277	-	-	-	M	-	-	-	domain protein
APMKGJCD_02360	3.09e-120	qorB	1.6.5.2	-	GM	ko:K19267	ko00130,ko01110,map00130,map01110	ko00000,ko00001,ko01000	NmrA-like family
APMKGJCD_02361	1.49e-93	ywnA	-	-	K	-	-	-	Transcriptional regulator
APMKGJCD_02362	0.0	lacL	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 2 family
APMKGJCD_02363	9.12e-237	lacM	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	beta-galactosidase
APMKGJCD_02364	2.29e-273	msmK2	-	-	P	ko:K10112	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
APMKGJCD_02365	0.0	-	-	-	G	ko:K10117	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding protein
APMKGJCD_02366	5.87e-194	-	-	-	U	ko:K10118	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
APMKGJCD_02367	1.67e-182	-	-	-	U	ko:K10119	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
APMKGJCD_02368	1.04e-182	rfbB	4.2.1.46	-	M	ko:K01710	ko00521,ko00523,ko00525,ko01055,ko01130,map00521,map00523,map00525,map01055,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
APMKGJCD_02369	8.36e-230	serA	1.1.1.399, 1.1.1.95	-	EH	ko:K00058	ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
APMKGJCD_02370	0.0	cydA	1.10.3.14	-	C	ko:K00425	ko00190,ko01100,ko02020,map00190,map01100,map02020	ko00000,ko00001,ko00002,ko01000	ubiquinol oxidase
APMKGJCD_02371	6.5e-224	cydB	1.10.3.14	-	C	ko:K00426	ko00190,ko01100,ko02020,map00190,map01100,map02020	ko00000,ko00001,ko00002,ko01000	Cytochrome d ubiquinol oxidase subunit II
APMKGJCD_02372	4.51e-287	cydC	-	-	CO	ko:K16013	ko02010,map02010	ko00000,ko00001,ko02000	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
APMKGJCD_02373	2.35e-38	cydC	-	-	CO	ko:K16013	ko02010,map02010	ko00000,ko00001,ko02000	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
APMKGJCD_02374	0.0	cydD	-	-	CO	ko:K16012	ko02010,map02010	ko00000,ko00001,ko02000	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
APMKGJCD_02375	5e-227	hepT	2.5.1.30	-	H	ko:K00805	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	Belongs to the FPP GGPP synthase family
APMKGJCD_02376	4.33e-205	menA	2.5.1.74	-	H	ko:K02548	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01006	1,4-dihydroxy-2-naphthoate
APMKGJCD_02377	2.26e-129	xpt	2.4.2.22	-	F	ko:K03816	ko00230,ko01100,ko01110,map00230,map01100,map01110	ko00000,ko00001,ko01000	Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
APMKGJCD_02378	1.74e-274	purK2	6.3.4.18	-	F	ko:K01589	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
APMKGJCD_02379	0.0	pcrA	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	ATP-dependent DNA helicase
APMKGJCD_02380	0.0	ligA	6.5.1.2	-	L	ko:K01972	ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430	ko00000,ko00001,ko01000,ko03032,ko03400	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
APMKGJCD_02381	1.33e-257	camS	-	-	S	-	-	-	sex pheromone
APMKGJCD_02382	4.8e-66	gatC	6.3.5.6, 6.3.5.7	-	J	ko:K02435	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
APMKGJCD_02383	0.0	gatA	6.3.5.6, 6.3.5.7	-	J	ko:K02433	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
APMKGJCD_02384	0.0	gatB	6.3.5.6, 6.3.5.7	-	J	ko:K02434	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
APMKGJCD_02385	1.76e-234	dagK	2.7.1.107	-	G	ko:K07029	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko01000	Lipid kinase
APMKGJCD_02386	0.0	rumA_2	2.1.1.190	-	J	ko:K03215	-	ko00000,ko01000,ko03009	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
APMKGJCD_02387	4.78e-56	eutP	-	-	E	ko:K04029	-	ko00000	Ethanolamine utilisation - propanediol utilisation
APMKGJCD_02388	7.75e-170	glpF	-	-	U	ko:K02440	-	ko00000,ko02000	Belongs to the MIP aquaporin (TC 1.A.8) family
APMKGJCD_02389	1.71e-264	-	-	-	K	-	-	-	helix_turn_helix, arabinose operon control protein
APMKGJCD_02390	1.47e-55	-	-	-	CQ	-	-	-	BMC
APMKGJCD_02391	6.34e-166	pduB	-	-	E	-	-	-	BMC
APMKGJCD_02392	0.0	pduC	4.2.1.28	-	Q	ko:K01699	ko00640,map00640	ko00000,ko00001,ko01000	Dehydratase large subunit
APMKGJCD_02393	3.39e-166	pduD	4.2.1.28	-	Q	ko:K13919	ko00640,map00640	ko00000,ko00001,ko01000	Dehydratase medium subunit
APMKGJCD_02394	2.23e-119	pduE	4.2.1.28	-	Q	ko:K13920	ko00640,map00640	ko00000,ko00001,ko01000	Dehydratase small subunit
APMKGJCD_02395	0.0	pduG	-	-	D	-	-	-	Diol dehydratase reactivase ATPase-like domain
APMKGJCD_02396	9.81e-77	pduH	-	-	S	-	-	-	Dehydratase medium subunit
APMKGJCD_02397	8.27e-111	-	-	-	CQ	-	-	-	BMC
APMKGJCD_02398	3.38e-56	pduJ	-	-	CQ	-	-	-	BMC
APMKGJCD_02399	4.18e-147	pduL	2.3.1.222	-	Q	ko:K13923	ko00640,map00640	ko00000,ko00001,ko01000	Involved in 1,2-propanediol (1,2-PD) degradation by catalyzing the conversion of propanoyl-CoA to propanoyl-phosphate
APMKGJCD_02400	7.49e-117	-	-	-	S	-	-	-	Putative propanediol utilisation
APMKGJCD_02401	1.27e-55	pduN	-	-	CQ	ko:K04028	-	ko00000	Ethanolamine utilisation protein EutN/carboxysome
APMKGJCD_02402	7.33e-135	-	-	-	S	-	-	-	Cobalamin adenosyltransferase
APMKGJCD_02403	1.18e-104	pduO	-	-	S	-	-	-	Haem-degrading
APMKGJCD_02404	0.0	pduP	1.2.1.87	-	C	ko:K13922	ko00640,map00640	ko00000,ko00001,ko01000	Aldehyde dehydrogenase family
APMKGJCD_02405	1.87e-269	pduQ	-	-	C	ko:K13921	ko00640,map00640	ko00000,ko00001	Iron-containing alcohol dehydrogenase
APMKGJCD_02406	1.64e-281	ackA	2.7.2.1	-	F	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
APMKGJCD_02407	1.47e-72	-	-	-	E	ko:K04031	-	ko00000	BMC
APMKGJCD_02408	1.87e-248	namA	-	-	C	-	-	-	Oxidoreductase
APMKGJCD_02409	1.69e-186	-	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Pfam:Y_phosphatase3C
APMKGJCD_02410	1.06e-76	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
APMKGJCD_02411	1.27e-50	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
APMKGJCD_02412	1.05e-155	deoC	4.1.2.4	-	F	ko:K01619	ko00030,map00030	ko00000,ko00001,ko01000	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
APMKGJCD_02413	2.68e-296	deoB	5.4.2.7	-	G	ko:K01839	ko00030,ko00230,map00030,map00230	ko00000,ko00001,ko01000	Phosphotransfer between the C1 and C5 carbon atoms of pentose
APMKGJCD_02414	1.23e-166	deoD	2.4.2.1	-	F	ko:K03784	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	Purine nucleoside phosphorylase
APMKGJCD_02415	6.79e-222	deoR	-	-	K	ko:K05346	-	ko00000,ko03000	sugar-binding domain protein
APMKGJCD_02416	1.09e-307	pdp	2.4.2.2	-	F	ko:K00756	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	pyrimidine-nucleoside phosphorylase
APMKGJCD_02417	0.0	gshA	6.3.2.2	-	H	ko:K01919	ko00270,ko00480,ko01100,map00270,map00480,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the glutamate--cysteine ligase type 1 family
APMKGJCD_02418	5.83e-87	rbsD	5.4.99.62	-	G	ko:K06726	ko02010,map02010	ko00000,ko00001,ko01000	Catalyzes the interconversion of beta-pyran and beta- furan forms of D-ribose
APMKGJCD_02419	0.0	fucP	-	-	G	ko:K02429	-	ko00000,ko02000	Major Facilitator Superfamily
APMKGJCD_02420	2.1e-304	-	-	-	E	ko:K03294	-	ko00000	amino acid
APMKGJCD_02421	4.42e-292	gntP	-	-	EG	ko:K03299	-	ko00000,ko02000	Gluconate
APMKGJCD_02422	0.0	gntK	2.7.1.12	-	G	ko:K00851	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko01000	Belongs to the FGGY kinase family
APMKGJCD_02423	8.34e-195	gntR	-	-	K	-	-	-	rpiR family
APMKGJCD_02424	5.71e-190	lys	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
APMKGJCD_02425	2.89e-84	-	-	-	S	-	-	-	Domain of unknown function (DUF4828)
APMKGJCD_02426	4.05e-242	mocA	-	-	S	-	-	-	Oxidoreductase
APMKGJCD_02427	2.15e-298	yfmL	-	-	L	-	-	-	DEAD DEAH box helicase
APMKGJCD_02430	7.84e-101	-	-	-	T	-	-	-	Universal stress protein family
APMKGJCD_02431	2.22e-296	gntP	-	-	EG	ko:K03299	-	ko00000,ko02000	Gluconate
APMKGJCD_02432	1.87e-203	csbB	-	GT2	M	ko:K20534	-	ko00000,ko01000,ko01005,ko02000	Glycosyltransferase like family 2
APMKGJCD_02433	1.05e-272	mnaA	5.1.3.14	-	G	ko:K01791	ko00520,ko01100,ko05111,map00520,map01100,map05111	ko00000,ko00001,ko00002,ko01000,ko01005	Belongs to the UDP-N-acetylglucosamine 2-epimerase family
APMKGJCD_02434	1.3e-201	-	-	-	S	-	-	-	Nuclease-related domain
APMKGJCD_02435	1.56e-203	rbn	-	-	S	ko:K07058	-	ko00000	Belongs to the UPF0761 family
APMKGJCD_02436	2.17e-102	ykuP	-	-	C	ko:K03839	-	ko00000	Flavodoxin
APMKGJCD_02437	8.69e-187	recX	-	-	S	ko:K03565	-	ko00000,ko03400	Regulatory protein RecX
APMKGJCD_02438	8.66e-161	pbpX2	-	-	V	-	-	-	Beta-lactamase
APMKGJCD_02439	7.93e-97	pbpX2	-	-	V	-	-	-	Beta-lactamase
APMKGJCD_02440	2.15e-52	-	-	-	S	-	-	-	Bacteriocin-protection, YdeI or OmpD-Associated
APMKGJCD_02441	1.5e-140	ygaC	-	-	J	ko:K07586	-	ko00000	Belongs to the UPF0374 family
APMKGJCD_02442	1.54e-251	yueF	-	-	S	-	-	-	AI-2E family transporter
APMKGJCD_02443	2.51e-98	tagD	2.7.7.39	-	IM	ko:K00980	ko00564,map00564	ko00000,ko00001,ko01000	Glycerol-3-phosphate cytidylyltransferase
APMKGJCD_02444	1.06e-201	-	-	-	-	-	-	-	-
APMKGJCD_02445	0.0	tagF	2.7.8.12	-	M	ko:K09809	-	ko00000,ko01000	glycerophosphotransferase
APMKGJCD_02446	6.28e-118	-	-	-	-	-	-	-	-
APMKGJCD_02447	0.0	prfC	-	-	J	ko:K02837	-	ko00000,ko03012	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
APMKGJCD_02448	0.0	-	-	-	S	-	-	-	Leucine-rich repeat (LRR) protein
APMKGJCD_02449	0.0	nox	1.6.3.4	-	C	ko:K17869	-	ko00000,ko01000	NADH oxidase
APMKGJCD_02450	6.5e-45	pepD2	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
APMKGJCD_02451	3.24e-283	pepD2	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
APMKGJCD_02452	0.0	pacL3	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	Cation transporter/ATPase, N-terminus
APMKGJCD_02453	1.12e-272	-	-	-	G	-	-	-	MucBP domain
APMKGJCD_02454	0.0	clpE	-	-	O	ko:K03697	-	ko00000,ko03110	Belongs to the ClpA ClpB family
APMKGJCD_02455	3.61e-42	-	-	-	-	-	-	-	-
APMKGJCD_02456	2.6e-54	ptsH	-	-	G	ko:K11189	-	ko00000,ko02000	phosphocarrier protein HPR
APMKGJCD_02457	1.96e-34	ptsI	2.7.3.9	-	G	ko:K08483	ko02060,map02060	ko00000,ko00001,ko01000,ko02000	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
APMKGJCD_02458	0.0	ptsI	2.7.3.9	-	G	ko:K08483	ko02060,map02060	ko00000,ko00001,ko01000,ko02000	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
APMKGJCD_02459	2e-285	pimB	2.4.1.337	GT4	M	ko:K19002	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000,ko01003	Glycosyltransferase, group 1 family protein
APMKGJCD_02460	7.33e-248	cpoA	2.4.1.208	GT4	M	ko:K13677,ko:K13678	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000,ko01003	Glycosyltransferase, group 1 family protein
APMKGJCD_02461	6.38e-235	mprF	-	-	S	ko:K07027	-	ko00000,ko02000	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
APMKGJCD_02462	3.96e-49	ykuJ	-	-	S	-	-	-	Protein of unknown function (DUF1797)
APMKGJCD_02463	0.0	ltaS	2.7.8.20	-	M	ko:K19005	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily