ORF_ID e_value Gene_name EC_number CAZy COGs KEGG_ko KEGG_Pathway BRITE Description
PMDBBNKE_00001 1.44e-278 - - - C - - - Belongs to the aldehyde dehydrogenase family
PMDBBNKE_00002 5.97e-157 ung2 - - L - - - Uracil-DNA glycosylase
PMDBBNKE_00003 2.24e-155 pnb - - C - - - nitroreductase
PMDBBNKE_00004 2.02e-85 - 4.1.2.50, 4.2.3.12 - H ko:K01737 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko00002,ko01000,ko03016 6-pyruvoyl tetrahydropterin synthase
PMDBBNKE_00005 2.14e-148 - - - S - - - Elongation factor G-binding protein, N-terminal
PMDBBNKE_00006 0.0 - - - C - - - FMN_bind
PMDBBNKE_00007 0.0 - - - P ko:K03319 - ko00000 Sodium:sulfate symporter transmembrane region
PMDBBNKE_00008 2.55e-101 - - - K - - - LysR family
PMDBBNKE_00009 4.28e-83 - - - K - - - LysR family
PMDBBNKE_00010 1.69e-93 - - - C - - - FMN binding
PMDBBNKE_00011 1.82e-97 arsC 1.20.4.1 - T ko:K03741 - ko00000,ko01000 Belongs to the low molecular weight phosphotyrosine protein phosphatase family
PMDBBNKE_00012 3.34e-210 - - - S - - - KR domain
PMDBBNKE_00013 9.51e-203 adc 4.1.1.4 - Q ko:K01574 ko00072,ko00640,ko01100,map00072,map00640,map01100 ko00000,ko00001,ko00002,ko01000 Acetoacetate decarboxylase (ADC)
PMDBBNKE_00014 5.07e-157 ydgI - - C - - - Nitroreductase family
PMDBBNKE_00015 0.0 - - - QT - - - PucR C-terminal helix-turn-helix domain
PMDBBNKE_00016 2.22e-154 pgmB 5.4.2.6 - S ko:K01838 ko00500,map00500 ko00000,ko00001,ko01000 beta-phosphoglucomutase
PMDBBNKE_00017 2.28e-250 pva1 3.5.1.24 - M ko:K01442 ko00120,ko00121,ko01100,map00120,map00121,map01100 ko00000,ko00001,ko01000 Linear amide C-N hydrolase, choloylglycine hydrolase family protein
PMDBBNKE_00018 0.0 - - - S - - - Putative threonine/serine exporter
PMDBBNKE_00019 6.86e-175 ptp1 3.1.3.48 - T ko:K01104 - ko00000,ko01000 Tyrosine phosphatase family
PMDBBNKE_00020 0.0 hpaH 1.14.14.8, 1.14.14.9 - Q ko:K00483,ko:K16901 ko00350,ko00380,ko01120,ko01220,map00350,map00380,map01120,map01220 ko00000,ko00001,ko01000 4-hydroxyphenylacetate
PMDBBNKE_00021 1.65e-106 - - - S - - - ASCH
PMDBBNKE_00022 1.25e-164 - - - F - - - glutamine amidotransferase
PMDBBNKE_00023 1.88e-216 - - - K - - - WYL domain
PMDBBNKE_00024 6.65e-152 azoR - - C ko:K01118 - ko00000,ko01000 Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
PMDBBNKE_00025 0.0 fusA1 - - J - - - elongation factor G
PMDBBNKE_00026 3.66e-59 - - - S - - - Protein of unknown function
PMDBBNKE_00027 2.84e-81 - - - S - - - Protein of unknown function
PMDBBNKE_00028 4.28e-195 - - - EG - - - EamA-like transporter family
PMDBBNKE_00029 7.65e-121 yfbM - - K - - - FR47-like protein
PMDBBNKE_00030 1.4e-162 - - - S - - - DJ-1/PfpI family
PMDBBNKE_00031 3.42e-234 - 1.1.1.1 - C ko:K00001 ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220 ko00000,ko00001,ko01000 nadph quinone reductase
PMDBBNKE_00032 1.92e-67 - - - K - - - helix_turn_helix, Arsenical Resistance Operon Repressor
PMDBBNKE_00033 6.97e-301 mepA - - V ko:K18908 - ko00000,ko00002,ko01504,ko02000 MATE efflux family protein
PMDBBNKE_00034 3.5e-217 pepI 3.4.11.5 - E ko:K01259 ko00330,map00330 ko00000,ko00001,ko01000,ko01002 Releases the N-terminal proline from various substrates
PMDBBNKE_00035 7.76e-181 XK27_08125 - - S ko:K09861 - ko00000 Belongs to the UPF0246 family
PMDBBNKE_00036 2.38e-99 - - - - - - - -
PMDBBNKE_00037 0.0 oppA - - E ko:K02035,ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 Bacterial extracellular solute-binding proteins, family 5 Middle
PMDBBNKE_00038 5.9e-181 - - - - - - - -
PMDBBNKE_00039 4.07e-05 - - - - - - - -
PMDBBNKE_00040 2.92e-186 ant1 2.7.7.47 - H ko:K00984 - ko00000,ko01000,ko01504 Mediates bacterial resistance to the antibiotics streptomycin and spectomycin
PMDBBNKE_00041 1.67e-54 - - - - - - - -
PMDBBNKE_00042 7.41e-167 - - - P ko:K02006 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter
PMDBBNKE_00043 8.38e-193 - - - P ko:K02008 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Cobalt transport protein
PMDBBNKE_00044 1.84e-235 cbiM - - P ko:K02007 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 PDGLE domain
PMDBBNKE_00045 1.39e-156 rcfB - - K - - - Crp-like helix-turn-helix domain
PMDBBNKE_00046 7.9e-306 larA 5.1.2.1 - S ko:K22373 ko00620,map00620 ko00000,ko00001,ko01000 Domain of unknown function (DUF2088)
PMDBBNKE_00047 2.65e-162 larB - - S ko:K06898 - ko00000 AIR carboxylase
PMDBBNKE_00048 2.03e-179 larC 4.99.1.12 - S ko:K09121 - ko00000,ko01000 Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2 ), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor- dependent enzymes
PMDBBNKE_00049 6.32e-99 larC2 4.99.1.12 - S ko:K09121 - ko00000,ko01000 Protein of unknown function DUF111
PMDBBNKE_00050 1.19e-170 glpF - - U ko:K02440 - ko00000,ko02000 Belongs to the MIP aquaporin (TC 1.A.8) family
PMDBBNKE_00051 3.69e-193 larE - - S ko:K06864 - ko00000 NAD synthase
PMDBBNKE_00052 4.79e-225 - - - C - - - Zinc-binding dehydrogenase
PMDBBNKE_00053 2.27e-176 thiM 2.7.1.50 - H ko:K00878 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
PMDBBNKE_00054 9.72e-188 thiD 2.7.1.49, 2.7.4.7 - H ko:K00941 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko00002,ko01000 Phosphomethylpyrimidine kinase
PMDBBNKE_00055 7.67e-143 thiE 2.5.1.3 - H ko:K00788 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko00002,ko01000 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)
PMDBBNKE_00056 9.14e-265 thiP - - U - - - Belongs to the purine-cytosine permease (2.A.39) family
PMDBBNKE_00057 7.45e-178 puuD - - S ko:K07010 - ko00000,ko01002 peptidase C26
PMDBBNKE_00058 0.0 - - - L - - - HIRAN domain
PMDBBNKE_00059 1.24e-109 - 3.6.1.55 - F ko:K03574 - ko00000,ko01000,ko03400 NUDIX domain
PMDBBNKE_00060 0.0 yifK - - E ko:K03293 - ko00000 Amino acid permease
PMDBBNKE_00061 8.96e-160 - - - - - - - -
PMDBBNKE_00062 5.08e-192 - - - I - - - Alpha/beta hydrolase family
PMDBBNKE_00063 0.0 pacL1 3.6.3.8 - P ko:K01537 - ko00000,ko01000 P-type ATPase
PMDBBNKE_00064 1.29e-181 - - - F - - - Phosphorylase superfamily
PMDBBNKE_00065 2.92e-38 pspC - - KT ko:K03973 - ko00000,ko02048,ko03000 PspC domain
PMDBBNKE_00066 5.13e-144 azo1 1.5.1.36, 1.7.1.6 - S ko:K03206,ko:K19784,ko:K22393 ko00740,ko01100,map00740,map01100 ko00000,ko00001,ko01000 NADPH-dependent FMN reductase
PMDBBNKE_00067 1.27e-98 - - - K - - - Transcriptional regulator
PMDBBNKE_00068 2.31e-95 hsp1 - - O ko:K13993 ko04141,map04141 ko00000,ko00001,ko03110 Belongs to the small heat shock protein (HSP20) family
PMDBBNKE_00069 2.14e-39 - - - S - - - Protein of unknown function (DUF3021)
PMDBBNKE_00070 4.14e-97 - - - K - - - LytTr DNA-binding domain
PMDBBNKE_00071 5.38e-290 - - - EGP ko:K08161 - ko00000,ko02000 Transporter, major facilitator family protein
PMDBBNKE_00072 3.98e-68 - - - K - - - helix_turn_helix, Arsenical Resistance Operon Repressor
PMDBBNKE_00073 2.79e-274 yycB - - P ko:K03449 - ko00000,ko02000 Transporter, major facilitator family protein
PMDBBNKE_00075 2.16e-204 morA - - S - - - reductase
PMDBBNKE_00076 9.59e-212 - 1.1.1.65 - C ko:K05275 ko00750,ko01100,ko01120,map00750,map01100,map01120 ko00000,ko00001,ko01000 Aldo keto reductase
PMDBBNKE_00077 7.84e-106 - - - F - - - Nucleoside 2-deoxyribosyltransferase like
PMDBBNKE_00078 0.0 l1n 4.2.1.53 - S ko:K10254 - ko00000,ko01000 Myosin-crossreactive antigen
PMDBBNKE_00079 4.03e-132 - - - - - - - -
PMDBBNKE_00080 0.0 - - - - - - - -
PMDBBNKE_00081 5.33e-267 - - - C - - - Oxidoreductase
PMDBBNKE_00082 3.28e-193 cbiQ - - P ko:K16785 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 cobalt transport
PMDBBNKE_00083 0.0 ykoD - - P ko:K16786,ko:K16787 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ABC transporter, ATP-binding protein
PMDBBNKE_00084 2.57e-128 - - - S ko:K16924 - ko00000,ko00002,ko02000 UPF0397 protein
PMDBBNKE_00085 4.37e-167 - - - K ko:K03492 - ko00000,ko03000 UbiC transcription regulator-associated domain protein
PMDBBNKE_00086 4.14e-72 - - - K - - - Transcriptional regulator PadR-like family
PMDBBNKE_00087 7.71e-183 - - - - - - - -
PMDBBNKE_00088 3.16e-191 - - - - - - - -
PMDBBNKE_00089 3.37e-115 - - - - - - - -
PMDBBNKE_00090 1.01e-184 dhrS4 1.1.1.100 - IQ ko:K00059 ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 Oxidoreductase, short chain dehydrogenase reductase family protein
PMDBBNKE_00091 1.04e-218 ybhF_1 - - V ko:K01990 - ko00000,ko00002,ko02000 ABC transporter
PMDBBNKE_00092 0.0 - - - M ko:K01992 - ko00000,ko00002,ko02000 Exporter of polyketide antibiotics
PMDBBNKE_00093 9.77e-152 - - - K ko:K09017 - ko00000,ko03000 Transcriptional regulator
PMDBBNKE_00094 0.0 etfA 1.3.1.108 - C ko:K03522,ko:K22432 - ko00000,ko01000,ko04147 Electron transfer flavoprotein FAD-binding domain
PMDBBNKE_00095 2.04e-99 - - - T - - - ECF transporter, substrate-specific component
PMDBBNKE_00097 1.85e-121 XK27_02085 - - K - - - Bacterial regulatory proteins, tetR family
PMDBBNKE_00098 2.35e-243 dhaK2 2.7.1.28, 2.7.1.29, 4.6.1.15 - G ko:K00863 ko00051,ko00561,ko00680,ko01100,ko01120,ko01200,ko04622,map00051,map00561,map00680,map01100,map01120,map01200,map04622 ko00000,ko00001,ko00002,ko01000 Dak1 domain
PMDBBNKE_00099 9.52e-240 dhaK 2.7.1.121 - G ko:K05878 ko00561,ko01100,map00561,map01100 ko00000,ko00001,ko01000 Dak1 domain
PMDBBNKE_00100 2.75e-131 dhaL 2.7.1.121 - S ko:K05879 ko00561,ko01100,map00561,map01100 ko00000,ko00001,ko01000 Dak2
PMDBBNKE_00101 6.76e-75 dhaM 2.7.1.121 - S ko:K05881 ko00561,map00561 ko00000,ko00001,ko01000,ko02000 PTS system fructose IIA component
PMDBBNKE_00102 4e-172 glpF - - U ko:K02440 - ko00000,ko02000 Belongs to the MIP aquaporin (TC 1.A.8) family
PMDBBNKE_00103 2.65e-245 malR1 - - K ko:K02529 - ko00000,ko03000 Transcriptional regulator, LacI family
PMDBBNKE_00104 1.83e-231 yvdE - - K - - - helix_turn _helix lactose operon repressor
PMDBBNKE_00105 0.0 malA1 3.2.1.10, 3.2.1.20 GH13,GH31 G ko:K01182,ko:K01187 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 Alpha amylase, catalytic domain
PMDBBNKE_00106 4.69e-299 mdxE - - G ko:K02027,ko:K15770,ko:K17237 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Bacterial extracellular solute-binding protein
PMDBBNKE_00107 8.8e-301 malC - - P ko:K15771 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
PMDBBNKE_00108 2.83e-206 malD - - P ko:K15772 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter permease
PMDBBNKE_00109 1.75e-191 malA - - S - - - maltodextrose utilization protein MalA
PMDBBNKE_00110 0.0 malS 3.2.1.1 GH13 G ko:K01176 ko00500,ko01100,ko04973,map00500,map01100,map04973 ko00000,ko00001,ko01000 Glycogen debranching enzyme, glucanotransferase domain
PMDBBNKE_00111 2.44e-267 msmX - - P ko:K10112 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Belongs to the ABC transporter superfamily
PMDBBNKE_00112 0.0 mapA 2.4.1.8 GH65 G ko:K00691 ko00500,ko01100,map00500,map01100 ko00000,ko00001,ko01000 hydrolase, family 65, central catalytic
PMDBBNKE_00113 0.0 - 3.2.1.96 - G ko:K01227 ko00511,map00511 ko00000,ko00001,ko01000 Glycosyl hydrolase family 85
PMDBBNKE_00114 8.23e-61 ygbF - - S - - - Sugar efflux transporter for intercellular exchange
PMDBBNKE_00115 8.91e-216 scrK 2.7.1.4 - GK ko:K00847 ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100 ko00000,ko00001,ko01000 ROK family
PMDBBNKE_00116 0.0 scrA 2.7.1.211 - G ko:K02808,ko:K02809,ko:K02810 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 phosphotransferase system
PMDBBNKE_00117 0.0 scrB 3.2.1.26 GH32 G ko:K01193 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 invertase
PMDBBNKE_00118 2.4e-230 scrR - - K ko:K02529,ko:K03484 - ko00000,ko03000 Transcriptional regulator, LacI family
PMDBBNKE_00119 0.0 - 3.2.1.10, 3.2.1.20 GH13,GH31 G ko:K01182,ko:K01187 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 Alpha amylase, catalytic domain protein
PMDBBNKE_00120 1.91e-83 - 1.1.1.1 - C ko:K00001 ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220 ko00000,ko00001,ko01000 nadph quinone reductase
PMDBBNKE_00121 5.6e-103 - 1.1.1.1 - C ko:K00001 ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220 ko00000,ko00001,ko01000 nadph quinone reductase
PMDBBNKE_00122 0.0 nhaC - - C ko:K03315 - ko00000,ko02000 Na H antiporter NhaC
PMDBBNKE_00123 0.0 malL 3.2.1.10, 3.2.1.20 GH13,GH31 G ko:K01182,ko:K01187 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 Alpha amylase, catalytic domain protein
PMDBBNKE_00124 4.92e-212 mleR - - K - - - LysR substrate binding domain
PMDBBNKE_00125 0.0 - - - M - - - domain protein
PMDBBNKE_00127 1.03e-201 - - - K ko:K20480 ko02024,map02024 ko00000,ko00001,ko03000 Helix-turn-helix
PMDBBNKE_00128 0.0 oppA - - E ko:K02035,ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter, substratebinding protein
PMDBBNKE_00129 0.0 oppA - - E ko:K02035,ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter, substratebinding protein
PMDBBNKE_00130 1.31e-102 yiaC - - K ko:K03826 - ko00000,ko01000 Acetyltransferase (GNAT) domain
PMDBBNKE_00131 1.19e-277 serA 1.1.1.399, 1.1.1.95 - EH ko:K00058 ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PMDBBNKE_00132 1.24e-259 serC 2.6.1.52 - E ko:K00831 ko00260,ko00680,ko00750,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map00750,map01100,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
PMDBBNKE_00133 2.73e-147 pgm1 - - G - - - phosphoglycerate mutase
PMDBBNKE_00134 1.01e-228 yghZ - - C ko:K19265 - ko00000,ko01000 Aldo keto reductase family protein
PMDBBNKE_00135 6.33e-46 - - - - - - - -
PMDBBNKE_00136 4.69e-79 - - - S - - - Domain of unknown function (DU1801)
PMDBBNKE_00137 6.21e-208 fbpA - - K - - - Domain of unknown function (DUF814)
PMDBBNKE_00138 2.6e-278 ackA 2.7.2.1 - F ko:K00925 ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PMDBBNKE_00139 3.81e-18 - - - - - - - -
PMDBBNKE_00140 3.18e-77 crcB - - U ko:K06199 - ko00000,ko02000 Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PMDBBNKE_00141 5.66e-74 crcB - - D ko:K06199 - ko00000,ko02000 Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PMDBBNKE_00142 0.0 - - - S ko:K18231,ko:K19349 ko02010,map02010 br01600,ko00000,ko00001,ko01504,ko02000 ATPases associated with a variety of cellular activities
PMDBBNKE_00143 3.54e-149 ykoC - - P ko:K16785 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 cobalt transport
PMDBBNKE_00144 0.0 - - - P ko:K16786,ko:K16787 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ABC transporter
PMDBBNKE_00145 1.43e-131 - - - S ko:K16925 - ko00000,ko00002,ko02000 ABC transporter permease
PMDBBNKE_00146 6.07e-117 gpo 1.11.1.9 - O ko:K00432 ko00480,ko00590,ko04918,map00480,map00590,map04918 ko00000,ko00001,ko01000 Belongs to the glutathione peroxidase family
PMDBBNKE_00147 5.3e-202 dkgB - - S - - - reductase
PMDBBNKE_00148 1.28e-102 greA - - K ko:K03624 - ko00000,ko03021 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PMDBBNKE_00149 1.2e-91 - - - - - - - -
PMDBBNKE_00150 3.16e-170 nagB 3.5.99.6 - G ko:K02564 ko00520,ko01100,map00520,map01100 ko00000,ko00001,ko01000 Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
PMDBBNKE_00152 0.0 pepD1 - - E ko:K08659 - ko00000,ko01000,ko01002 Dipeptidase
PMDBBNKE_00153 0.0 mtlA 2.7.1.197 - G ko:K02799,ko:K02800 ko00051,ko02060,map00051,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system, Lactose/Cellobiose specific IIB subunit
PMDBBNKE_00154 0.0 mtlR - - K ko:K03483 - ko00000,ko03000 Mga helix-turn-helix domain
PMDBBNKE_00155 5.33e-103 mtlF 2.7.1.197 - G ko:K02798 ko00051,ko02060,map00051,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PMDBBNKE_00156 2.61e-282 mtlD 1.1.1.17 - C ko:K00009 ko00051,map00051 ko00000,ko00001,ko01000 mannitol-1-phosphate 5-dehydrogenase activity
PMDBBNKE_00157 1.21e-111 - - - - - - - -
PMDBBNKE_00158 1.96e-75 trxA - - O ko:K03671 ko04621,ko05418,map04621,map05418 ko00000,ko00001,ko03110 Belongs to the thioredoxin family
PMDBBNKE_00159 7.19e-68 - - - - - - - -
PMDBBNKE_00160 1.22e-125 - - - - - - - -
PMDBBNKE_00161 2.98e-90 - - - - - - - -
PMDBBNKE_00162 2.41e-106 ndk 2.7.4.6 - F ko:K00940 ko00230,ko00240,ko00983,ko01100,ko01110,ko01130,ko04016,map00230,map00240,map00983,map01100,map01110,map01130,map04016 ko00000,ko00001,ko00002,ko01000,ko04131 Belongs to the NDK family
PMDBBNKE_00163 0.0 - - - S ko:K13730 ko05100,map05100 ko00000,ko00001 Uncharacterized protein conserved in bacteria (DUF2252)
PMDBBNKE_00164 2.21e-127 - - - S ko:K19784 - ko00000 NADPH-dependent FMN reductase
PMDBBNKE_00165 1.89e-159 - - - K - - - helix_turn_helix gluconate operon transcriptional repressor
PMDBBNKE_00166 4.08e-291 pts3C - - G ko:K02761 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko02000 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PMDBBNKE_00167 6.14e-53 - - - - - - - -
PMDBBNKE_00168 7.59e-269 - - - S ko:K09963 - ko00000 Bacterial protein of unknown function (DUF871)
PMDBBNKE_00169 3.63e-271 dho 3.5.2.3 - S ko:K01465 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Amidohydrolase family
PMDBBNKE_00170 5.06e-259 selA 2.9.1.1 - H ko:K01042 ko00450,ko00970,map00450,map00970 ko00000,ko00001,ko01000 L-seryl-tRNA selenium transferase
PMDBBNKE_00171 1.22e-166 - 4.1.2.14 - S ko:K17463 ko00030,ko01100,ko01120,map00030,map01100,map01120 ko00000,ko00001,ko00002,ko01000 KDGP aldolase
PMDBBNKE_00172 2.02e-245 - 2.7.1.45 - G ko:K00874 ko00030,ko01100,ko01120,ko01200,map00030,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 pfkB family carbohydrate kinase
PMDBBNKE_00173 3.68e-125 cysE 2.3.1.30 - E ko:K00640 ko00270,ko00920,ko01100,ko01110,ko01120,ko01200,ko01230,ko05111,map00270,map00920,map01100,map01110,map01120,map01200,map01230,map05111 ko00000,ko00001,ko00002,ko01000 Bacterial transferase hexapeptide (six repeats)
PMDBBNKE_00174 5.78e-268 mccB 4.4.1.1, 4.4.1.2, 4.4.1.8 - E ko:K01760,ko:K17217 ko00260,ko00270,ko00450,ko00920,ko01100,ko01110,ko01130,ko01230,map00260,map00270,map00450,map00920,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 cystathionine
PMDBBNKE_00175 1.3e-211 mccA 2.5.1.134, 2.5.1.47 - E ko:K01738,ko:K17216 ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the cysteine synthase cystathionine beta- synthase family
PMDBBNKE_00176 6.72e-203 map 3.4.11.18 - E ko:K01265 - ko00000,ko01000,ko01002 Methionine Aminopeptidase
PMDBBNKE_00177 1.27e-181 pnuC - - H ko:K03811 - ko00000,ko02000 nicotinamide mononucleotide transporter
PMDBBNKE_00178 7.55e-58 - - - S - - - Protein of unknown function (DUF2089)
PMDBBNKE_00179 2.21e-56 - - - - - - - -
PMDBBNKE_00180 1.68e-166 treR - - K ko:K03486 - ko00000,ko03000 UTRA
PMDBBNKE_00181 0.0 treC 3.2.1.93 GH13 G ko:K01226 ko00500,map00500 ko00000,ko00001,ko01000 Alpha amylase, catalytic domain protein
PMDBBNKE_00182 0.0 pts4ABC - - G ko:K02755,ko:K02756,ko:K02757 ko02060,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 phosphotransferase system
PMDBBNKE_00183 0.0 pts5ABC - - G ko:K02755,ko:K02756,ko:K02757 ko02060,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 phosphotransferase system, EIIB
PMDBBNKE_00184 2.6e-185 - - - - - - - -
PMDBBNKE_00185 6.2e-129 ubiX 2.5.1.129 - H ko:K03186 ko00130,ko00627,ko00940,ko01100,ko01110,ko01120,ko01220,map00130,map00627,map00940,map01100,map01110,map01120,map01220 ko00000,ko00001,ko00002,ko01000 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN
PMDBBNKE_00186 7.84e-92 - - - - - - - -
PMDBBNKE_00187 8.9e-96 ywnA - - K - - - Transcriptional regulator
PMDBBNKE_00188 5.2e-156 - - - K - - - Bacterial regulatory proteins, tetR family
PMDBBNKE_00189 4.02e-301 mntH - - P ko:K03322 - ko00000,ko02000 H( )-stimulated, divalent metal cation uptake system
PMDBBNKE_00190 2.6e-149 - - - - - - - -
PMDBBNKE_00191 2.81e-55 - - - - - - - -
PMDBBNKE_00192 1.55e-55 - - - - - - - -
PMDBBNKE_00193 0.0 ydiC - - EGP - - - Major Facilitator
PMDBBNKE_00194 2.2e-86 - - - K - - - helix_turn_helix, mercury resistance
PMDBBNKE_00195 1.4e-314 hpk2 - - T - - - Histidine kinase
PMDBBNKE_00196 3.28e-166 rrp2 - - K - - - Transcriptional regulatory protein, C terminal
PMDBBNKE_00197 9.86e-65 - - - - - - - -
PMDBBNKE_00198 1.96e-167 yidA - - K - - - Helix-turn-helix domain, rpiR family
PMDBBNKE_00199 3.96e-310 licC - - G ko:K02761 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko02000 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PMDBBNKE_00200 3.35e-75 - - - - - - - -
PMDBBNKE_00201 2.87e-56 - - - - - - - -
PMDBBNKE_00202 1.76e-236 brpA - - K - - - Cell envelope-like function transcriptional attenuator common domain protein
PMDBBNKE_00203 0.0 loxD 1.1.3.15 - C ko:K00104 ko00630,ko01100,ko01110,ko01120,ko01130,map00630,map01100,map01110,map01120,map01130 ko00000,ko00001,ko01000 FAD linked oxidases, C-terminal domain
PMDBBNKE_00204 1.49e-63 - - - - - - - -
PMDBBNKE_00205 2.04e-158 ywaC 2.7.6.5 - S ko:K00951,ko:K07816 ko00230,map00230 ko00000,ko00001,ko01000 RelA SpoT domain protein
PMDBBNKE_00206 1.17e-135 - - - K - - - transcriptional regulator
PMDBBNKE_00207 0.0 ydgH - - S ko:K06994 - ko00000 MMPL family
PMDBBNKE_00208 8.31e-139 tag 3.2.2.20 - L ko:K01246 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 glycosylase
PMDBBNKE_00209 0.0 - - - S - - - Leucine-rich repeat (LRR) protein
PMDBBNKE_00210 5.74e-32 - - - S - - - Leucine-rich repeat (LRR) protein
PMDBBNKE_00211 1.76e-293 vex3 - - V ko:K02004 - ko00000,ko00002,ko02000 MacB-like periplasmic core domain
PMDBBNKE_00212 4.87e-156 vex2 - - V ko:K02003 - ko00000,ko00002,ko02000 ABC transporter
PMDBBNKE_00213 1.13e-171 - - - V ko:K07052 - ko00000 CAAX protease self-immunity
PMDBBNKE_00214 8.03e-70 - - - S ko:K07052 - ko00000 CAAX protease self-immunity
PMDBBNKE_00215 3.64e-33 - - - S ko:K07052 - ko00000 CAAX protease self-immunity
PMDBBNKE_00216 2.02e-38 - - - L ko:K07487 - ko00000 Transposase
PMDBBNKE_00217 6.46e-111 - - - - - - - -
PMDBBNKE_00218 5.53e-205 - - - S - - - Domain of unknown function (DUF4767)
PMDBBNKE_00219 6.35e-69 - - - - - - - -
PMDBBNKE_00220 3.61e-61 - - - S - - - MORN repeat
PMDBBNKE_00221 0.0 XK27_09800 - - I - - - Acyltransferase family
PMDBBNKE_00222 1.81e-50 ydaS - - S - - - Transglycosylase associated protein
PMDBBNKE_00223 1.95e-116 - - - - - - - -
PMDBBNKE_00224 5.74e-32 - - - - - - - -
PMDBBNKE_00225 1.1e-93 asp1 - - S - - - Asp23 family, cell envelope-related function
PMDBBNKE_00226 1.04e-94 asp2 - - S - - - Asp23 family, cell envelope-related function
PMDBBNKE_00227 2.02e-192 yisK 3.7.1.5, 4.1.1.68 - Q ko:K05921,ko:K16164 ko00350,ko01100,ko01120,ko01220,map00350,map01100,map01120,map01220 ko00000,ko00001,ko00002,ko01000 Fumarylacetoacetate (FAA) hydrolase family
PMDBBNKE_00228 2.11e-211 yjdB - - S - - - Domain of unknown function (DUF4767)
PMDBBNKE_00229 4.46e-63 - 2.7.1.196, 2.7.1.205 - G ko:K02759 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system, Lactose/Cellobiose specific IIA subunit
PMDBBNKE_00230 2.19e-131 - - - G - - - Glycogen debranching enzyme
PMDBBNKE_00231 0.0 pepN 3.4.11.2 - E ko:K01256 ko00480,ko01100,map00480,map01100 ko00000,ko00001,ko01000,ko01002 aminopeptidase
PMDBBNKE_00232 0.0 hsdR 3.1.21.3 - V ko:K01153 - ko00000,ko01000,ko02048 Subunit R is required for both nuclease and ATPase activities, but not for modification
PMDBBNKE_00233 1.55e-73 hsdM 2.1.1.72 - V ko:K03427 - ko00000,ko01000,ko02048 type I restriction-modification system
PMDBBNKE_00234 1.45e-276 hsdM 2.1.1.72 - V ko:K03427 - ko00000,ko01000,ko02048 type I restriction-modification system
PMDBBNKE_00235 1.23e-11 - 3.1.21.3 - V ko:K01154 - ko00000,ko01000,ko02048 Type I restriction modification DNA specificity domain
PMDBBNKE_00236 1.75e-79 - 3.1.21.3 - V ko:K01154 - ko00000,ko01000,ko02048 Type I restriction modification DNA specificity domain
PMDBBNKE_00237 6.29e-220 - - - L - - - Belongs to the 'phage' integrase family
PMDBBNKE_00238 8.97e-63 hsdS 3.1.21.3 - V ko:K01154 - ko00000,ko01000,ko02048 type I restriction modification DNA specificity domain protein
PMDBBNKE_00239 2.31e-117 XK27_09665 - - G ko:K15640 - ko00000 Phosphoglycerate mutase family
PMDBBNKE_00240 0.0 - - - M - - - MucBP domain
PMDBBNKE_00241 1.42e-08 - - - - - - - -
PMDBBNKE_00242 1.27e-115 - - - S - - - AAA domain
PMDBBNKE_00243 1.83e-180 - - - K - - - sequence-specific DNA binding
PMDBBNKE_00244 1.09e-123 - - - K - - - Helix-turn-helix domain
PMDBBNKE_00245 1.6e-219 - - - K - - - Transcriptional regulator
PMDBBNKE_00246 0.0 - - - C - - - FMN_bind
PMDBBNKE_00248 4.3e-106 - - - K - - - Transcriptional regulator
PMDBBNKE_00249 4.71e-149 azoR - - I ko:K01118 - ko00000,ko01000 Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
PMDBBNKE_00250 0.0 asnS 6.1.1.22 - J ko:K01893 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Asparaginyl-tRNA synthetase
PMDBBNKE_00251 3.39e-255 asnA 6.3.1.1 - F ko:K01914 ko00250,ko00460,ko01100,ko01110,ko01230,map00250,map00460,map01100,map01110,map01230 ko00000,ko00001,ko01000 aspartate--ammonia ligase
PMDBBNKE_00252 0.0 pepDA - - E ko:K08659 - ko00000,ko01000,ko01002 Dipeptidase
PMDBBNKE_00253 1.32e-290 - - - L - - - DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
PMDBBNKE_00254 9.05e-55 - - - - - - - -
PMDBBNKE_00255 4.95e-44 - - - L - - - leucine-zipper of insertion element IS481
PMDBBNKE_00256 0.0 recQ 3.6.4.12 - L ko:K03654 ko03018,map03018 ko00000,ko00001,ko01000,ko03400 ATP-dependent DNA helicase RecQ
PMDBBNKE_00257 1.65e-209 rluD2 5.4.99.23 - J ko:K06180 - ko00000,ko01000,ko03009 Responsible for synthesis of pseudouridine from uracil
PMDBBNKE_00258 5.06e-68 - - - K - - - helix_turn_helix, Arsenical Resistance Operon Repressor
PMDBBNKE_00259 8.34e-179 - - - S - - - NADPH-dependent FMN reductase
PMDBBNKE_00260 3.91e-244 - - - - - - - -
PMDBBNKE_00261 2.41e-280 yibE - - S - - - overlaps another CDS with the same product name
PMDBBNKE_00262 8.44e-163 yibF - - S - - - overlaps another CDS with the same product name
PMDBBNKE_00263 1.22e-132 - - - K - - - FR47-like protein
PMDBBNKE_00264 1.5e-156 gpm5 - - G - - - Phosphoglycerate mutase family
PMDBBNKE_00265 3.33e-64 - - - - - - - -
PMDBBNKE_00266 3.48e-245 - - - I - - - alpha/beta hydrolase fold
PMDBBNKE_00267 0.0 xylP2 - - G - - - symporter
PMDBBNKE_00268 0.0 murE 6.3.2.13 - M ko:K01928 ko00300,ko00550,map00300,map00550 ko00000,ko00001,ko01000,ko01011 Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
PMDBBNKE_00269 1.2e-281 dapG 2.7.2.4 - E ko:K00928 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Amino acid kinase family
PMDBBNKE_00270 0.0 asnB 6.3.5.4 - E ko:K01953 ko00250,ko01100,ko01110,map00250,map01100,map01110 ko00000,ko00001,ko01000,ko01002 Asparagine synthase
PMDBBNKE_00271 2.41e-66 azlD - - S - - - Branched-chain amino acid transport protein (AzlD)
PMDBBNKE_00272 1.43e-155 azlC - - E - - - branched-chain amino acid
PMDBBNKE_00273 1.75e-47 - - - K - - - MerR HTH family regulatory protein
PMDBBNKE_00274 5.92e-170 - - - - - - - -
PMDBBNKE_00275 2.72e-152 - - - S - - - Domain of unknown function (DUF4811)
PMDBBNKE_00276 0.0 ycnB - - U - - - Belongs to the major facilitator superfamily
PMDBBNKE_00277 7.79e-112 - - - K - - - MerR HTH family regulatory protein
PMDBBNKE_00278 1.36e-77 - - - - - - - -
PMDBBNKE_00279 2.94e-155 mntR - - K ko:K03709 - ko00000,ko03000 iron dependent repressor
PMDBBNKE_00280 1.78e-42 cspC - - K ko:K03704 - ko00000,ko03000 Cold shock protein
PMDBBNKE_00281 4.6e-169 - - - S - - - Putative threonine/serine exporter
PMDBBNKE_00282 7.76e-100 - - - S - - - Threonine/Serine exporter, ThrE
PMDBBNKE_00283 2.34e-242 brpA - - K - - - Cell envelope-like function transcriptional attenuator common domain protein
PMDBBNKE_00284 2.05e-153 - - - I - - - phosphatase
PMDBBNKE_00285 3.88e-198 - - - I - - - alpha/beta hydrolase fold
PMDBBNKE_00286 3.03e-129 yjcK 2.3.1.128 - J ko:K03790 - ko00000,ko01000,ko03009 Acetyltransferase (GNAT) domain
PMDBBNKE_00287 1.7e-118 - - - K - - - Transcriptional regulator
PMDBBNKE_00288 0.0 alsS 2.2.1.6 - EH ko:K01652 ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the TPP enzyme family
PMDBBNKE_00289 0.0 lysP - - E ko:K03293,ko:K11733 - ko00000,ko02000 amino acid
PMDBBNKE_00290 1.29e-153 dacB 3.4.17.14 - M ko:K07260 ko00550,ko01100,ko01502,ko02020,map00550,map01100,map01502,map02020 ko00000,ko00001,ko00002,ko01000,ko01002,ko01011,ko01504 D-alanyl-D-alanine carboxypeptidase
PMDBBNKE_00291 1.11e-148 dgk2 - - F - - - deoxynucleoside kinase
PMDBBNKE_00292 1.62e-294 serS 6.1.1.11 - J ko:K01875 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
PMDBBNKE_00300 9.78e-102 ctsR - - K ko:K03708 - ko00000,ko03000 Belongs to the CtsR family
PMDBBNKE_00301 0.0 clpC - - O ko:K03696 ko01100,map01100 ko00000,ko03110 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
PMDBBNKE_00302 6.72e-140 - - - K - - - Bacterial regulatory proteins, tetR family
PMDBBNKE_00303 0.0 rpoB 2.7.7.6 - K ko:K03043 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PMDBBNKE_00304 0.0 rpoC 2.7.7.6 - K ko:K03046 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PMDBBNKE_00305 8.58e-149 comC 3.4.23.43 - NOU ko:K02236 - ko00000,ko00002,ko01000,ko02044 Bacterial Peptidase A24 N-terminal domain
PMDBBNKE_00306 4.19e-92 rpsL - - J ko:K02950 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
PMDBBNKE_00307 1.19e-107 rpsG - - J ko:K02992 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
PMDBBNKE_00308 0.0 fusA - - J ko:K02355 - ko00000,ko03012,ko03029 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
PMDBBNKE_00309 4.46e-66 rpsJ - - J ko:K02946 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Involved in the binding of tRNA to the ribosomes
PMDBBNKE_00310 4.34e-145 rplC - - J ko:K02906 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
PMDBBNKE_00311 9.83e-141 rplD - - J ko:K02926 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms part of the polypeptide exit tunnel
PMDBBNKE_00312 2.27e-59 rplW - - J ko:K02892 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
PMDBBNKE_00313 6.61e-193 rplB - - J ko:K02886 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
PMDBBNKE_00314 1.85e-62 rpsS - - J ko:K02965 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
PMDBBNKE_00315 3.59e-69 rplV - - J ko:K02890 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
PMDBBNKE_00316 5.46e-152 rpsC - - J ko:K02982 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
PMDBBNKE_00317 8.29e-100 rplP - - J ko:K02878 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
PMDBBNKE_00318 1.11e-33 rpmC - - J ko:K02904 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the universal ribosomal protein uL29 family
PMDBBNKE_00319 1.96e-54 rpsQ - - J ko:K02961 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
PMDBBNKE_00320 2.98e-78 rplN - - J ko:K02874 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
PMDBBNKE_00321 4.1e-67 rplX - - J ko:K02895 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
PMDBBNKE_00322 3.53e-123 rplE - - J ko:K02931 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
PMDBBNKE_00323 4.99e-88 rpsH - - J ko:K02994 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
PMDBBNKE_00324 2.14e-123 rplF - - J ko:K02933 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
PMDBBNKE_00325 1.75e-75 rplR - - J ko:K02881 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
PMDBBNKE_00326 5.32e-109 rpsE - - J ko:K02988 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
PMDBBNKE_00327 8.44e-34 rpmD - - J ko:K02907 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal protein L30
PMDBBNKE_00328 1.32e-91 rplO - - J ko:K02876 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds to the 23S rRNA
PMDBBNKE_00329 5.95e-300 secY - - U ko:K03076 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
PMDBBNKE_00330 1.84e-160 adk 2.7.4.3 - F ko:K00939 ko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000,ko04147 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
PMDBBNKE_00331 1.19e-45 infA - - J ko:K02518 - ko00000,ko03012 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
PMDBBNKE_00332 9.65e-79 rpsM - - J ko:K02952 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
PMDBBNKE_00333 7.71e-82 rpsK - - J ko:K02948 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
PMDBBNKE_00334 2.19e-220 rpoA 2.7.7.6 - K ko:K03040 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PMDBBNKE_00335 7.76e-81 rplQ - - J ko:K02879 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal protein L17
PMDBBNKE_00336 1.02e-233 hepT 2.5.1.30, 2.5.1.83 - H ko:K00805,ko:K21275 ko00900,ko01110,map00900,map01110 ko00000,ko00001,ko01000,ko01006 Belongs to the FPP GGPP synthase family
PMDBBNKE_00337 1.41e-122 hepA 2.5.1.30 - S ko:K00805 ko00900,ko01110,map00900,map01110 ko00000,ko00001,ko01000,ko01006 Heptaprenyl diphosphate synthase component I
PMDBBNKE_00338 5.37e-112 - - - S - - - NusG domain II
PMDBBNKE_00339 0.0 ndh 1.6.99.3 - C ko:K03885 ko00190,map00190 ko00000,ko00001,ko01000 NADH dehydrogenase
PMDBBNKE_00340 3.19e-194 - - - S - - - FMN_bind
PMDBBNKE_00341 1.07e-264 apbE 2.7.1.180 - H ko:K03734 - ko00000,ko01000 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
PMDBBNKE_00342 1.98e-197 ecfA1 - - P ko:K16786 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PMDBBNKE_00343 2.85e-211 ecfA2 - - P ko:K16787 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PMDBBNKE_00344 9.72e-184 ecfT - - U ko:K16785 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PMDBBNKE_00345 3.06e-194 truA 5.4.99.12 - J ko:K06173 - ko00000,ko01000,ko03016 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
PMDBBNKE_00346 4.58e-103 rplM - - J ko:K02871 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
PMDBBNKE_00347 8.98e-86 rpsI - - J ko:K02996 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the universal ribosomal protein uS9 family
PMDBBNKE_00348 2.44e-209 yitS - - S - - - Uncharacterised protein, DegV family COG1307
PMDBBNKE_00349 1e-234 - - - S - - - Membrane
PMDBBNKE_00350 2.61e-259 - - - C - - - Belongs to the LDH2 MDH2 oxidoreductase family
PMDBBNKE_00351 0.0 tkt2 2.2.1.1 - H ko:K00615 ko00030,ko00710,ko01051,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01051,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
PMDBBNKE_00352 2.35e-211 aroE 1.1.1.25 - E ko:K00014 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
PMDBBNKE_00353 3.3e-235 aroF 2.5.1.54 - E ko:K03856 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 DAHP synthetase I family
PMDBBNKE_00354 1.23e-251 aroB 4.2.3.4 - E ko:K01735 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
PMDBBNKE_00355 0.0 - - - P ko:K03319 - ko00000 Sodium:sulfate symporter transmembrane region
PMDBBNKE_00356 1.51e-69 yitW - - S - - - Iron-sulfur cluster assembly protein
PMDBBNKE_00357 2.01e-147 - 4.2.1.2, 4.2.1.32 - C ko:K01676,ko:K03780 ko00020,ko00620,ko00630,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00620,map00630,map00720,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the reversible hydration of fumarate to (S)- malate
PMDBBNKE_00358 3.01e-225 ttdA 4.2.1.32 - C ko:K03779 ko00630,map00630 ko00000,ko00001,ko01000 Fumarate hydratase (Fumerase)
PMDBBNKE_00359 6.33e-254 - - - K - - - Helix-turn-helix domain
PMDBBNKE_00360 9.07e-196 citG 2.4.2.52 - H ko:K05966 ko02020,map02020 ko00000,ko00001,ko01000 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase
PMDBBNKE_00361 2.04e-170 mntB 3.6.3.35 - P ko:K02074,ko:K09820,ko:K19973 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ABC transporter
PMDBBNKE_00362 3.54e-180 mtsB - - U ko:K19972,ko:K19976 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC 3 transport family
PMDBBNKE_00363 1.22e-221 mntA - - P ko:K19975,ko:K19976 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Belongs to the bacterial solute-binding protein 9 family
PMDBBNKE_00364 1.18e-66 - - - - - - - -
PMDBBNKE_00365 9.2e-215 ldh 1.1.1.27 - C ko:K00016 ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922 ko00000,ko00001,ko01000,ko04147 Belongs to the LDH MDH superfamily. LDH family
PMDBBNKE_00366 0.0 citP - - P ko:K03319 - ko00000 Sodium:sulfate symporter transmembrane region
PMDBBNKE_00367 8.69e-230 citR - - K - - - sugar-binding domain protein
PMDBBNKE_00368 3.19e-263 mae 1.1.1.38 - C ko:K00027 ko00620,ko01200,ko02020,map00620,map01200,map02020 ko00000,ko00001,ko01000 Malic enzyme, NAD binding domain
PMDBBNKE_00369 2.52e-240 citC 6.2.1.22 - H ko:K01910 ko02020,map02020 ko00000,ko00001,ko01000 Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
PMDBBNKE_00370 1.23e-58 citD - - C ko:K01646 ko02020,map02020 ko00000,ko00001 Covalent carrier of the coenzyme of citrate lyase
PMDBBNKE_00371 3.32e-210 citE 4.1.3.34 - G ko:K01644 ko02020,map02020 ko00000,ko00001,ko01000 Belongs to the HpcH HpaI aldolase family
PMDBBNKE_00372 0.0 citF 2.8.3.10 - H ko:K01643 ko02020,map02020 ko00000,ko00001,ko01000 Citrate (pro-3S)-lyase alpha chain
PMDBBNKE_00374 0.0 fumC 4.2.1.2 - C ko:K01679 ko00020,ko00620,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko04934,ko05200,ko05211,map00020,map00620,map00720,map01100,map01110,map01120,map01130,map01200,map04934,map05200,map05211 ko00000,ko00001,ko00002,ko01000 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
PMDBBNKE_00375 0.0 frdA 1.3.5.4 - C ko:K00244 ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020 ko00000,ko00001,ko00002,ko01000 FAD binding domain
PMDBBNKE_00376 1.98e-122 citX 2.7.7.61 - HI ko:K05964 ko02020,map02020 ko00000,ko00001,ko01000 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase
PMDBBNKE_00377 4.35e-205 mleR2 - - K - - - LysR family transcriptional regulator
PMDBBNKE_00378 6.5e-215 mleR - - K - - - LysR family
PMDBBNKE_00379 0.0 mleS 1.1.1.38, 4.1.1.101 - C ko:K00027,ko:K22212 ko00620,ko01120,ko01200,ko02020,map00620,map01120,map01200,map02020 ko00000,ko00001,ko01000 Malic enzyme
PMDBBNKE_00380 2.6e-212 mleP2 - - S ko:K07088 - ko00000 Sodium Bile acid symporter family
PMDBBNKE_00381 0.0 - - - E ko:K03294 - ko00000 Amino Acid
PMDBBNKE_00382 4.37e-128 - - - S - - - ECF transporter, substrate-specific component
PMDBBNKE_00383 2.56e-34 - - - - - - - -
PMDBBNKE_00384 0.0 - - - S ko:K06889 - ko00000 Alpha beta
PMDBBNKE_00385 0.0 cydA 1.10.3.14 - C ko:K00425 ko00190,ko01100,ko02020,map00190,map01100,map02020 ko00000,ko00001,ko00002,ko01000 ubiquinol oxidase
PMDBBNKE_00386 7.76e-234 cydB 1.10.3.14 - C ko:K00426 ko00190,ko01100,ko02020,map00190,map01100,map02020 ko00000,ko00001,ko00002,ko01000 Cytochrome d ubiquinol oxidase subunit II
PMDBBNKE_00387 0.0 cydC - - CO ko:K16013 ko02010,map02010 ko00000,ko00001,ko02000 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
PMDBBNKE_00388 0.0 cydD - - CO ko:K16012 ko02010,map02010 ko00000,ko00001,ko02000 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
PMDBBNKE_00389 7.68e-208 - - - S - - - L,D-transpeptidase catalytic domain
PMDBBNKE_00390 2.11e-233 hepT 2.5.1.30 - H ko:K00805 ko00900,ko01110,map00900,map01110 ko00000,ko00001,ko01000,ko01006 Belongs to the FPP GGPP synthase family
PMDBBNKE_00391 8.5e-213 menA 2.5.1.74 - H ko:K02548 ko00130,ko01100,ko01110,map00130,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko01006 1,4-dihydroxy-2-naphthoate
PMDBBNKE_00392 9.47e-236 - - - S - - - Oxidoreductase family, NAD-binding Rossmann fold
PMDBBNKE_00393 5.66e-145 acmA 3.2.1.17, 3.2.1.96 - NU ko:K01185,ko:K01227 ko00511,map00511 ko00000,ko00001,ko01000 mannosyl-glycoprotein
PMDBBNKE_00394 2.01e-134 xpt 2.4.2.22 - F ko:K03816 ko00230,ko01100,ko01110,map00230,map01100,map01110 ko00000,ko00001,ko01000 Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
PMDBBNKE_00395 1.13e-120 yebE - - S - - - UPF0316 protein
PMDBBNKE_00396 1.39e-279 purK2 6.3.4.18 - F ko:K01589 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
PMDBBNKE_00397 0.0 pcrA 3.6.4.12 - L ko:K03657 ko03420,ko03430,map03420,map03430 ko00000,ko00001,ko01000,ko03400 ATP-dependent DNA helicase
PMDBBNKE_00398 0.0 ligA 6.5.1.2 - L ko:K01972 ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430 ko00000,ko00001,ko01000,ko03032,ko03400 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
PMDBBNKE_00399 9.48e-263 camS - - S - - - sex pheromone
PMDBBNKE_00400 5.11e-67 gatC 6.3.5.6, 6.3.5.7 - J ko:K02435 ko00970,ko01100,map00970,map01100 ko00000,ko00001,ko01000,ko03029 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PMDBBNKE_00401 0.0 gatA 6.3.5.6, 6.3.5.7 - J ko:K02433 ko00970,ko01100,map00970,map01100 ko00000,ko00001,ko01000,ko03029 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
PMDBBNKE_00402 0.0 gatB 6.3.5.6, 6.3.5.7 - J ko:K02434 ko00970,ko01100,map00970,map01100 ko00000,ko00001,ko01000,ko03029 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PMDBBNKE_00403 1.59e-242 dagK 2.7.1.107 - G ko:K07029 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 ko00000,ko00001,ko01000 Lipid kinase
PMDBBNKE_00404 0.0 rumA_2 2.1.1.190 - J ko:K03215 - ko00000,ko01000,ko03009 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PMDBBNKE_00405 5.56e-130 yobS - - K - - - Bacterial regulatory proteins, tetR family
PMDBBNKE_00406 0.0 yfgQ - - P ko:K12952 - ko00000,ko01000 E1-E2 ATPase
PMDBBNKE_00407 7.06e-307 pts13C - - G ko:K02761 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko02000 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PMDBBNKE_00408 2.87e-215 - - - S - - - Alpha/beta hydrolase of unknown function (DUF915)
PMDBBNKE_00409 6.57e-195 gntR - - K - - - rpiR family
PMDBBNKE_00410 1.1e-185 lys - - M ko:K07273 - ko00000 Glycosyl hydrolases family 25
PMDBBNKE_00411 7.34e-83 - - - S - - - Domain of unknown function (DUF4828)
PMDBBNKE_00412 6.22e-43 cspP - - K ko:K03704 - ko00000,ko03000 'Cold-shock' DNA-binding domain
PMDBBNKE_00413 4.57e-244 mocA - - S - - - Oxidoreductase
PMDBBNKE_00414 5.62e-316 yfmL - - L - - - DEAD DEAH box helicase
PMDBBNKE_00416 3.93e-99 - - - T - - - Universal stress protein family
PMDBBNKE_00417 1.56e-313 pts14C - - G ko:K02761 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko02000 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PMDBBNKE_00418 1.12e-209 - - - S - - - Alpha/beta hydrolase of unknown function (DUF915)
PMDBBNKE_00420 7.62e-97 - - - - - - - -
PMDBBNKE_00421 2.9e-139 - - - - - - - -
PMDBBNKE_00422 0.0 gdhA 1.4.1.4 - E ko:K00262 ko00220,ko00250,ko00910,ko01100,map00220,map00250,map00910,map01100 ko00000,ko00001,ko01000 Belongs to the Glu Leu Phe Val dehydrogenases family
PMDBBNKE_00423 1.15e-281 pbpX - - V - - - Beta-lactamase
PMDBBNKE_00424 4.75e-267 mnaA 5.1.3.14 - G ko:K01791 ko00520,ko01100,ko05111,map00520,map01100,map05111 ko00000,ko00001,ko00002,ko01000,ko01005 Belongs to the UDP-N-acetylglucosamine 2-epimerase family
PMDBBNKE_00425 1.01e-199 rbn - - S ko:K07058 - ko00000 Belongs to the UPF0761 family
PMDBBNKE_00426 3.98e-169 glpF - - U ko:K02440 - ko00000,ko02000 Belongs to the MIP aquaporin (TC 1.A.8) family
PMDBBNKE_00427 6.08e-277 glf 5.4.99.9 - M ko:K01854 ko00052,ko00520,map00052,map00520 ko00000,ko00001,ko01000 UDP-galactopyranose mutase
PMDBBNKE_00429 2.23e-10 cap5B - - D - - - NUBPL iron-transfer P-loop NTPase
PMDBBNKE_00430 7.12e-09 - - - V - - - Beta-lactamase
PMDBBNKE_00431 1.43e-28 - - - S - - - O-antigen ligase like membrane protein
PMDBBNKE_00432 1.16e-99 cps3J - - M - - - Domain of unknown function (DUF4422)
PMDBBNKE_00433 2.84e-117 - - GT4 M ko:K02840 ko00540,ko01100,map00540,map01100 ko00000,ko00001,ko00002,ko01000,ko01003,ko01005 Glycosyl transferases group 1
PMDBBNKE_00434 1.4e-62 - 2.7.8.12 - M ko:K09809 - ko00000,ko01000 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
PMDBBNKE_00435 6.89e-68 - - - S ko:K07011 - ko00000 Glycosyltransferase like family 2
PMDBBNKE_00436 2.02e-214 - - - S ko:K03328 - ko00000 Membrane protein involved in the export of O-antigen and teichoic acid
PMDBBNKE_00437 1.33e-82 tagD 2.7.7.39 - IM ko:K00980 ko00564,map00564 ko00000,ko00001,ko01000 Glycerol-3-phosphate cytidylyltransferase
PMDBBNKE_00438 5.05e-130 - - - M - - - Parallel beta-helix repeats
PMDBBNKE_00439 8.79e-239 rfbB 4.2.1.46 - M ko:K01710 ko00521,ko00523,ko00525,ko01055,ko01130,map00521,map00523,map00525,map01055,map01130 ko00000,ko00001,ko00002,ko01000 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
PMDBBNKE_00440 3.69e-130 - - - L - - - Integrase
PMDBBNKE_00441 8.87e-168 epsB - - M - - - biosynthesis protein
PMDBBNKE_00442 6.79e-163 ywqD - - D - - - Capsular exopolysaccharide family
PMDBBNKE_00443 1.69e-184 ywqE 3.1.3.48 - GM ko:K01104 - ko00000,ko01000 PHP domain protein
PMDBBNKE_00444 1.33e-226 cps2D 5.1.3.2, 5.1.3.25 - M ko:K01784,ko:K17947 ko00052,ko00520,ko00523,ko01100,ko01130,map00052,map00520,map00523,map01100,map01130 ko00000,ko00001,ko00002,ko01000 RmlD substrate binding domain
PMDBBNKE_00445 8.38e-160 tuaA - - M - - - Bacterial sugar transferase
PMDBBNKE_00446 1.47e-166 cps4F - - M - - - Glycosyl transferases group 1
PMDBBNKE_00447 1.54e-159 cps4G - - M - - - Glycosyltransferase Family 4
PMDBBNKE_00448 2.96e-218 - - - - - - - -
PMDBBNKE_00449 2.08e-167 cps4I - - M - - - Glycosyltransferase like family 2
PMDBBNKE_00450 5.71e-57 - - - GM ko:K19426 - ko00000,ko01000 Polysaccharide pyruvyl transferase
PMDBBNKE_00451 2.34e-105 cps2J - - S - - - Polysaccharide biosynthesis protein
PMDBBNKE_00452 1e-28 cps2K - - L ko:K07473 - ko00000,ko02048 bacterial-type proximal promoter sequence-specific DNA binding
PMDBBNKE_00453 5.79e-34 - - - M - - - domain protein
PMDBBNKE_00454 8.73e-110 - - - M - - - domain protein
PMDBBNKE_00455 3.59e-39 - - - M - - - domain protein
PMDBBNKE_00456 8.11e-173 - - - M ko:K21493 - ko00000,ko01000,ko02048 self proteolysis
PMDBBNKE_00457 3.23e-58 - - - - - - - -
PMDBBNKE_00459 4.52e-153 - - - - - - - -
PMDBBNKE_00460 3.07e-48 - - - - - - - -
PMDBBNKE_00461 9.17e-41 - - - - - - - -
PMDBBNKE_00462 2.67e-173 - - - - - - - -
PMDBBNKE_00463 9.94e-142 - - - - - - - -
PMDBBNKE_00464 0.000143 - - - U ko:K15125 ko05133,map05133 ko00000,ko00001,ko00536 Large exoproteins involved in heme utilization or adhesion
PMDBBNKE_00465 2.87e-192 - - - L - - - Transposase and inactivated derivatives, IS30 family
PMDBBNKE_00467 6.19e-108 - - - - - - - -
PMDBBNKE_00469 8.72e-73 - - - S - - - Immunity protein 63
PMDBBNKE_00470 7.72e-35 - - - S - - - Barstar (barnase inhibitor)
PMDBBNKE_00471 8.92e-219 cps3A - - S ko:K07011 - ko00000 Glycosyltransferase like family 2
PMDBBNKE_00472 3.01e-225 - - - S - - - Glycosyltransferase like family 2
PMDBBNKE_00473 2.81e-282 glf 5.4.99.9 - M ko:K01854 ko00052,ko00520,map00052,map00520 ko00000,ko00001,ko01000 UDP-galactopyranose mutase
PMDBBNKE_00474 1.6e-259 cps3D - - - - - - -
PMDBBNKE_00475 2.92e-145 cps3E - - - - - - -
PMDBBNKE_00476 1.73e-207 cps3F - - - - - - -
PMDBBNKE_00477 1.03e-264 cps3H - - - - - - -
PMDBBNKE_00478 5.06e-260 cps3I - - G - - - Acyltransferase family
PMDBBNKE_00479 8.42e-190 cps3J - - M - - - Domain of unknown function (DUF4422)
PMDBBNKE_00480 2.91e-176 - - - K - - - helix_turn_helix, arabinose operon control protein
PMDBBNKE_00481 0.0 - - - M - - - domain protein
PMDBBNKE_00482 5.36e-97 - - - K - - - helix_turn_helix multiple antibiotic resistance protein
PMDBBNKE_00483 0.0 cps1C - - S ko:K03328 - ko00000 Membrane protein involved in the export of O-antigen and teichoic acid
PMDBBNKE_00484 1.38e-155 rfbP - - M ko:K13012,ko:K19428 - ko00000,ko01000,ko01005 Bacterial sugar transferase
PMDBBNKE_00485 9.02e-70 - - - - - - - -
PMDBBNKE_00486 1.04e-45 - - - S - - - Protein of unknown function (DUF2922)
PMDBBNKE_00487 1.95e-41 - - - - - - - -
PMDBBNKE_00488 1.35e-34 - - - - - - - -
PMDBBNKE_00489 6.87e-131 - - - K - - - DNA-templated transcription, initiation
PMDBBNKE_00490 7.74e-168 - - - - - - - -
PMDBBNKE_00491 1.01e-181 recX - - S ko:K03565 - ko00000,ko03400 Regulatory protein RecX
PMDBBNKE_00492 6.62e-138 ygaC - - J ko:K07586 - ko00000 Belongs to the UPF0374 family
PMDBBNKE_00493 9.64e-171 lytE - - M - - - NlpC/P60 family
PMDBBNKE_00494 5.64e-64 - - - K - - - sequence-specific DNA binding
PMDBBNKE_00495 7.17e-39 - - - S - - - Antitoxin component of a toxin-antitoxin (TA) module
PMDBBNKE_00496 4.02e-166 pbpX - - V - - - Beta-lactamase
PMDBBNKE_00497 4.22e-215 hdhL 1.1.1.27 - C ko:K00016 ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922 ko00000,ko00001,ko01000,ko04147 Belongs to the LDH MDH superfamily
PMDBBNKE_00498 1.13e-257 yueF - - S - - - AI-2E family transporter
PMDBBNKE_00499 6.04e-94 tagD 2.7.7.39 - IM ko:K00980 ko00564,map00564 ko00000,ko00001,ko01000 Glycerol-3-phosphate cytidylyltransferase
PMDBBNKE_00500 7.89e-290 gntP - - EG ko:K03299 - ko00000,ko02000 Gluconate
PMDBBNKE_00501 0.0 gntK 2.7.1.12 - G ko:K00851 ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko01000 Belongs to the FGGY kinase family
PMDBBNKE_00502 1.22e-218 gntZ 1.1.1.343, 1.1.1.44 - G ko:K00033 ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Dehydrogenase
PMDBBNKE_00503 0.0 gshR3 1.8.1.7 - C ko:K00383 ko00480,ko04918,map00480,map04918 ko00000,ko00001,ko01000 Glutathione reductase
PMDBBNKE_00504 0.0 prfC - - J ko:K02837 - ko00000,ko03012 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
PMDBBNKE_00505 0.0 - - - - - - - -
PMDBBNKE_00506 1.49e-252 - - - M - - - MucBP domain
PMDBBNKE_00507 1.36e-208 lysR5 - - K - - - LysR substrate binding domain
PMDBBNKE_00508 1.01e-172 - - - S ko:K07090 - ko00000 membrane transporter protein
PMDBBNKE_00509 3.85e-76 ywjH - - S - - - Protein of unknown function (DUF1634)
PMDBBNKE_00510 0.0 oppA - - E ko:K02035,ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter, substratebinding protein
PMDBBNKE_00511 3.44e-210 oppB - - P ko:K15581 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC-type dipeptide oligopeptide nickel transport systems, permease components
PMDBBNKE_00512 3.59e-241 oppC - - EP ko:K15582 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC-type dipeptide oligopeptide nickel transport systems, permease components
PMDBBNKE_00513 4.86e-258 oppD - - P ko:K15583 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 Belongs to the ABC transporter superfamily
PMDBBNKE_00514 5.67e-231 oppF - - P ko:K10823 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 Belongs to the ABC transporter superfamily
PMDBBNKE_00515 3.4e-85 - - - K - - - Winged helix DNA-binding domain
PMDBBNKE_00516 2.5e-132 - - - L - - - Integrase
PMDBBNKE_00517 0.0 clpE - - O ko:K03697 - ko00000,ko03110 Belongs to the ClpA ClpB family
PMDBBNKE_00518 5.6e-41 - - - - - - - -
PMDBBNKE_00519 1.24e-52 ptsH - - G ko:K11189 - ko00000,ko02000 phosphocarrier protein HPR
PMDBBNKE_00520 0.0 ptsI 2.7.3.9 - G ko:K08483 ko02060,map02060 ko00000,ko00001,ko01000,ko02000 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
PMDBBNKE_00521 1.41e-285 pimB 2.4.1.337 GT4 M ko:K19002 ko00561,ko01100,map00561,map01100 ko00000,ko00001,ko01000,ko01003 Glycosyltransferase, group 1 family protein
PMDBBNKE_00522 2.04e-254 cpoA 2.4.1.208 GT4 M ko:K13677,ko:K13678 ko00561,ko01100,map00561,map01100 ko00000,ko00001,ko01000,ko01003 Glycosyltransferase, group 1 family protein
PMDBBNKE_00523 2.16e-241 mprF - - I ko:K07027 - ko00000,ko02000 Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
PMDBBNKE_00524 2.29e-292 dacA2 3.4.16.4 - M ko:K07258 ko00550,ko01100,map00550,map01100 ko00000,ko00001,ko01000,ko01002,ko01011 Belongs to the peptidase S11 family
PMDBBNKE_00525 1.22e-292 araT - - E ko:K00841 ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Aminotransferase
PMDBBNKE_00526 1.56e-46 ykuJ - - S - - - Protein of unknown function (DUF1797)
PMDBBNKE_00527 0.0 ltaS 2.7.8.20 - M ko:K19005 ko00561,ko01100,map00561,map01100 ko00000,ko00001,ko01000 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
PMDBBNKE_00539 3.26e-119 - 2.4.2.7 - F ko:K00759 ko00230,ko01100,map00230,map01100 ko00000,ko00001,ko01000,ko04147 Phosphoribosyl transferase domain
PMDBBNKE_00540 1.82e-236 - - - P ko:K06901 - ko00000,ko02000 secondary active sulfate transmembrane transporter activity
PMDBBNKE_00541 1.25e-124 - - - - - - - -
PMDBBNKE_00542 1.58e-122 - - - K - - - Acetyltransferase (GNAT) domain
PMDBBNKE_00543 1.46e-200 prpA3 3.1.3.16 - T ko:K01090 - ko00000,ko01000 Calcineurin-like phosphoesterase superfamily domain
PMDBBNKE_00545 5.39e-292 mntH - - P ko:K03322 - ko00000,ko02000 H( )-stimulated, divalent metal cation uptake system
PMDBBNKE_00546 2.95e-239 hemH 4.99.1.1, 4.99.1.9 - H ko:K01772 ko00860,ko01100,ko01110,map00860,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Catalyzes the ferrous insertion into protoporphyrin IX
PMDBBNKE_00547 0.0 ybgF - - E ko:K02205,ko:K03293,ko:K16235,ko:K16236 - ko00000,ko02000 amino acid
PMDBBNKE_00548 6.48e-215 mmuM 2.1.1.10 - H ko:K00547 ko00270,ko01100,ko01110,map00270,map01100,map01110 ko00000,ko00001,ko01000 homocysteine S-methyltransferase
PMDBBNKE_00549 0.0 - 2.4.1.52 GT4 M ko:K00712 - ko00000,ko01000,ko01003 Glycosyl transferases group 1
PMDBBNKE_00550 5.79e-158 - - - - - - - -
PMDBBNKE_00551 2.78e-273 metK 2.5.1.6 - H ko:K00789 ko00270,ko01100,ko01110,ko01230,map00270,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
PMDBBNKE_00552 0.0 mdr - - EGP - - - Major Facilitator
PMDBBNKE_00553 1.5e-303 - - - N - - - Cell shape-determining protein MreB
PMDBBNKE_00554 0.0 - - - S - - - Pfam Methyltransferase
PMDBBNKE_00555 0.0 tagE2 2.4.1.52 GT4 M ko:K00712 - ko00000,ko01000,ko01003 Glycosyl transferases group 1
PMDBBNKE_00556 0.0 tagE3 2.4.1.52 GT4 M ko:K00712 - ko00000,ko01000,ko01003 Glycosyl transferases group 1
PMDBBNKE_00557 2.68e-39 - - - - - - - -
PMDBBNKE_00558 7.15e-121 mraW1 - - J - - - Putative rRNA methylase
PMDBBNKE_00559 2.07e-160 yodM 3.6.1.27 - I ko:K19302 ko00550,map00550 ko00000,ko00001,ko01000,ko01011 Acid phosphatase homologues
PMDBBNKE_00560 0.0 leuS 6.1.1.4 - J ko:K01869 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Belongs to the class-I aminoacyl-tRNA synthetase family
PMDBBNKE_00561 0.0 ytgP - - S ko:K03328 - ko00000 Polysaccharide biosynthesis protein
PMDBBNKE_00562 5.04e-176 rsuA 5.4.99.19 - J ko:K06183 - ko00000,ko01000,ko03009 Belongs to the pseudouridine synthase RsuA family
PMDBBNKE_00563 5.24e-194 nnrD 4.2.1.136, 5.1.99.6 - H ko:K17758,ko:K17759 - ko00000,ko01000 Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
PMDBBNKE_00564 0.0 pepV 3.5.1.18 - E ko:K01270,ko:K01274,ko:K01439 ko00300,ko00480,ko01100,ko01120,ko01230,map00300,map00480,map01100,map01120,map01230 ko00000,ko00001,ko00002,ko01000,ko01002 dipeptidase PepV
PMDBBNKE_00565 2.16e-109 - - - T - - - Belongs to the universal stress protein A family
PMDBBNKE_00566 1.02e-258 ugpC 3.6.3.20 - E ko:K05816,ko:K10112 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 Belongs to the ABC transporter superfamily
PMDBBNKE_00567 2.27e-221 ugpA - - U ko:K02025,ko:K05814 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
PMDBBNKE_00568 3.05e-193 ugpE - - G ko:K05815 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter permease
PMDBBNKE_00569 1.55e-136 ugpB - - G ko:K05813 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Bacterial extracellular solute-binding protein
PMDBBNKE_00570 8e-176 ugpB - - G ko:K05813 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Bacterial extracellular solute-binding protein
PMDBBNKE_00571 5.45e-162 glpQ1 3.1.4.46 - C ko:K01126 ko00564,map00564 ko00000,ko00001,ko01000 glycerophosphoryl diester phosphodiesterase
PMDBBNKE_00572 2.07e-155 dgk2 - - F - - - deoxynucleoside kinase
PMDBBNKE_00573 3.55e-72 mscL - - M ko:K03282 - ko00000,ko02000 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
PMDBBNKE_00574 0.0 XK27_06930 - - V ko:K01421 - ko00000 domain protein
PMDBBNKE_00576 3.63e-164 - - - V ko:K01992 - ko00000,ko00002,ko02000 Transport permease protein
PMDBBNKE_00577 3.06e-201 - - - V ko:K01990 - ko00000,ko00002,ko02000 ABC transporter
PMDBBNKE_00578 1.73e-224 - - - K ko:K01990 - ko00000,ko00002,ko02000 LytTr DNA-binding domain
PMDBBNKE_00579 4.03e-197 mrsA1 1.8.4.11 - O ko:K07304 - ko00000,ko01000 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PMDBBNKE_00580 5.2e-85 - - - K - - - helix_turn_helix, mercury resistance
PMDBBNKE_00581 1.64e-151 - - - GM - - - NAD(P)H-binding
PMDBBNKE_00582 6.59e-205 ydeD - - EG - - - COG0697 Permeases of the drug metabolite transporter (DMT) superfamily
PMDBBNKE_00583 1.97e-191 - - - S - - - Sucrose-6F-phosphate phosphohydrolase
PMDBBNKE_00584 7.83e-140 - - - - - - - -
PMDBBNKE_00585 8.83e-285 pltK 2.7.13.3 - T ko:K07706 ko02020,ko02024,map02020,map02024 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 GHKL domain
PMDBBNKE_00586 9.01e-179 agrA - - K ko:K07707 ko02020,ko02024,map02020,map02024 ko00000,ko00001,ko00002,ko02022 LytTr DNA-binding domain
PMDBBNKE_00587 5.37e-74 - - - - - - - -
PMDBBNKE_00588 4.56e-78 - - - - - - - -
PMDBBNKE_00589 1.23e-145 XK27_07085 - - S ko:K07052 - ko00000 CAAX protease self-immunity
PMDBBNKE_00590 2.2e-111 ohrR - - K ko:K18906 - ko00000,ko00002,ko01504,ko03000 helix_turn_helix multiple antibiotic resistance protein
PMDBBNKE_00591 2.95e-117 - - - - - - - -
PMDBBNKE_00592 7.12e-62 - - - - - - - -
PMDBBNKE_00593 0.0 uvrA2 - - L - - - ABC transporter
PMDBBNKE_00595 1.67e-270 int2 - - L - - - Belongs to the 'phage' integrase family
PMDBBNKE_00602 6.22e-48 - - - S - - - Pfam:Peptidase_M78
PMDBBNKE_00603 3.11e-30 - - - K - - - Helix-turn-helix XRE-family like proteins
PMDBBNKE_00605 2.89e-78 - - - S - - - ORF6C domain
PMDBBNKE_00608 3.03e-74 - - - S - - - Domain of unknown function (DUF771)
PMDBBNKE_00613 2.15e-169 - - - S - - - Putative HNHc nuclease
PMDBBNKE_00614 2.18e-93 - - - L - - - DnaD domain protein
PMDBBNKE_00615 8.38e-187 - - - L ko:K02315 - ko00000,ko03032 IstB-like ATP binding protein
PMDBBNKE_00617 5.65e-60 - - - - - - - -
PMDBBNKE_00618 1.02e-23 - - - - - - - -
PMDBBNKE_00619 2.95e-33 - - - S - - - YopX protein
PMDBBNKE_00621 5.23e-26 - - - - - - - -
PMDBBNKE_00622 1.29e-83 - - - S - - - Transcriptional regulator, RinA family
PMDBBNKE_00624 1.02e-18 - - - - - - - -
PMDBBNKE_00625 1.91e-88 - - - L - - - HNH nucleases
PMDBBNKE_00626 7.67e-37 - - - S - - - HNH endonuclease
PMDBBNKE_00627 3.31e-103 - - - L - - - Phage terminase, small subunit
PMDBBNKE_00628 0.0 - - - S - - - Phage Terminase
PMDBBNKE_00629 7.82e-34 - - - S - - - Protein of unknown function (DUF1056)
PMDBBNKE_00630 7.27e-286 - - - S - - - Phage portal protein
PMDBBNKE_00631 2.04e-163 - - - S - - - Clp protease
PMDBBNKE_00632 9.11e-266 - - - S - - - Phage capsid family
PMDBBNKE_00633 7.06e-70 - - - S - - - Phage gp6-like head-tail connector protein
PMDBBNKE_00634 1.48e-33 - - - S - - - Phage head-tail joining protein
PMDBBNKE_00635 1.14e-51 - - - - - - - -
PMDBBNKE_00637 6.37e-92 - - - S - - - Phage tail tube protein
PMDBBNKE_00639 5.58e-06 - - - - - - - -
PMDBBNKE_00640 0.0 - - - S - - - peptidoglycan catabolic process
PMDBBNKE_00641 4.85e-292 - - - S - - - Phage tail protein
PMDBBNKE_00642 9.97e-210 - - - S - - - Phage minor structural protein
PMDBBNKE_00643 8.35e-126 - - - S - - - Phage minor structural protein
PMDBBNKE_00647 2.04e-70 - - - - - - - -
PMDBBNKE_00648 4.95e-225 - - - M - - - Glycosyl hydrolases family 25
PMDBBNKE_00649 3.19e-50 - - - S - - - Haemolysin XhlA
PMDBBNKE_00652 4.29e-87 - - - - - - - -
PMDBBNKE_00653 9.03e-16 - - - - - - - -
PMDBBNKE_00654 3.89e-237 - - - - - - - -
PMDBBNKE_00655 4.91e-117 gtcA1 - - S - - - Teichoic acid glycosylation protein
PMDBBNKE_00656 8.01e-77 - - - S - - - Protein of unknown function (DUF1516)
PMDBBNKE_00657 0.0 yitJ 1.5.1.20, 2.1.1.10 - E ko:K00297,ko:K00547 ko00270,ko00670,ko00720,ko01100,ko01110,ko01120,ko01200,ko01523,map00270,map00670,map00720,map01100,map01110,map01120,map01200,map01523 ko00000,ko00001,ko00002,ko01000 catalyzes the formation of 5,10-methylenetetrahydrofolate from 5-methyltetrahydrofolate and S-adenosyl-L-homocysteine and methionine from S-adenosyl-L-methionine and L-homocysteine
PMDBBNKE_00658 0.0 metE 2.1.1.14 - E ko:K00549 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
PMDBBNKE_00659 0.0 - - - S - - - Protein conserved in bacteria
PMDBBNKE_00660 5.16e-292 sat 2.7.7.4 - H ko:K00958 ko00230,ko00261,ko00450,ko00920,ko01100,ko01120,ko01130,map00230,map00261,map00450,map00920,map01100,map01120,map01130 ko00000,ko00001,ko00002,ko01000 the enzyme from Thermus thermophilus is dimeric and binds a zinc ion that is coordinated by cysteine and histidine residues that are not found in all related proteins but is found in some thermophilic organisms
PMDBBNKE_00661 9.14e-146 cysC 2.7.1.25 - F ko:K00860 ko00230,ko00920,ko01100,ko01120,map00230,map00920,map01100,map01120 ko00000,ko00001,ko00002,ko01000 Catalyzes the synthesis of activated sulfate
PMDBBNKE_00662 1.79e-225 nrnA 3.1.13.3, 3.1.3.7 - S ko:K06881 ko00920,ko01100,ko01120,map00920,map01100,map01120 ko00000,ko00001,ko01000,ko03400 DHHA1 domain
PMDBBNKE_00663 0.0 astA 2.8.2.22 - M ko:K01023 - ko00000,ko01000 Arylsulfotransferase Ig-like domain
PMDBBNKE_00664 0.0 - - - P - - - Sodium:sulfate symporter transmembrane region
PMDBBNKE_00665 2.69e-316 dinF - - V - - - MatE
PMDBBNKE_00666 1.79e-42 - - - - - - - -
PMDBBNKE_00669 3.48e-103 yybD - - S ko:K02348 - ko00000 Acetyltransferase (GNAT) domain
PMDBBNKE_00670 0.0 argS 6.1.1.19 - J ko:K01887 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Arginyl-tRNA synthetase
PMDBBNKE_00671 4.64e-106 - - - - - - - -
PMDBBNKE_00672 0.0 yhcA - - V ko:K02003,ko:K02004 - ko00000,ko00002,ko02000 MacB-like periplasmic core domain
PMDBBNKE_00673 6.25e-138 - - - - - - - -
PMDBBNKE_00674 0.0 celR - - K - - - PRD domain
PMDBBNKE_00675 2.7e-104 - - - S - - - Domain of unknown function (DUF3284)
PMDBBNKE_00676 2.37e-68 lacF 2.7.1.196, 2.7.1.205, 2.7.1.207 - G ko:K02759,ko:K02786 ko00052,ko00500,ko01100,ko02060,map00052,map00500,map01100,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system, Lactose/Cellobiose specific IIA subunit
PMDBBNKE_00677 4.9e-64 - 2.7.1.196, 2.7.1.205 - G ko:K02760 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system, Lactose/Cellobiose specific IIB subunit
PMDBBNKE_00678 1.5e-310 - - - G ko:K02761 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko02000 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PMDBBNKE_00679 0.0 - 3.2.1.86 GT1 G ko:K01223 ko00010,ko00500,map00010,map00500 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 1 family
PMDBBNKE_00680 2.62e-43 - - - EGP ko:K08218 ko01501,map01501 ko00000,ko00001,ko00002,ko02000 Major facilitator Superfamily
PMDBBNKE_00681 7.43e-202 - - - EGP ko:K08218 ko01501,map01501 ko00000,ko00001,ko00002,ko02000 Major facilitator Superfamily
PMDBBNKE_00682 1.72e-148 yciB - - M - - - ErfK YbiS YcfS YnhG
PMDBBNKE_00683 1.65e-46 dltC2 6.1.1.13 - J ko:K14188 ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150 ko00000,ko00001,ko00002,ko01000,ko01504 Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PMDBBNKE_00684 0.0 ydfD - - K ko:K18907 - ko00000,ko00002,ko01504,ko03000 Alanine-glyoxylate amino-transferase
PMDBBNKE_00685 8.08e-133 argO - - S ko:K06895 - ko00000,ko02000 LysE type translocator
PMDBBNKE_00686 2.77e-271 arcT - - E - - - Aminotransferase
PMDBBNKE_00687 2.07e-102 argR - - K ko:K03402 - ko00000,ko03000 Regulates arginine biosynthesis genes
PMDBBNKE_00688 2.43e-18 - - - - - - - -
PMDBBNKE_00689 0.0 pbp2A 2.4.1.129, 3.4.16.4 GT51 M ko:K12555 ko00550,ko01100,ko01501,map00550,map01100,map01501 ko00000,ko00001,ko01000,ko01003,ko01011 penicillin-binding protein
PMDBBNKE_00690 9.94e-71 yheA - - S - - - Belongs to the UPF0342 family
PMDBBNKE_00691 4.47e-296 yhaO - - L ko:K03547 - ko00000,ko03400 Ser Thr phosphatase family protein
PMDBBNKE_00692 0.0 yhaN - - L - - - AAA domain
PMDBBNKE_00693 1.03e-240 yhaM - - S ko:K03698 - ko00000,ko01000,ko03019 Metal dependent phosphohydrolases with conserved 'HD' motif.
PMDBBNKE_00694 7.82e-278 - - - - - - - -
PMDBBNKE_00695 1.39e-232 - - - M - - - Peptidase family S41
PMDBBNKE_00696 6.59e-227 - - - K - - - LysR substrate binding domain
PMDBBNKE_00697 9.9e-144 - - - S - - - NADPH-dependent FMN reductase
PMDBBNKE_00698 0.0 - 1.3.5.4 - C ko:K00244 ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020 ko00000,ko00001,ko00002,ko01000 FAD binding domain
PMDBBNKE_00699 3e-127 - - - - - - - -
PMDBBNKE_00700 3.36e-100 - 2.4.2.6 - F ko:K08728 ko00240,map00240 ko00000,ko00001,ko01000 Nucleoside 2-deoxyribosyltransferase
PMDBBNKE_00701 5.27e-203 - - - T - - - Histidine kinase
PMDBBNKE_00702 1.73e-134 llrE - - K - - - Transcriptional regulatory protein, C terminal
PMDBBNKE_00703 7.93e-79 - 3.6.1.27 - I ko:K19302 ko00550,map00550 ko00000,ko00001,ko01000,ko01011 phosphatase
PMDBBNKE_00704 2.26e-167 yfdH - GT2 M ko:K12999 - ko00000,ko01000,ko01003,ko01005 Glycosyltransferase, group 2 family protein
PMDBBNKE_00705 1.18e-100 - - - S ko:K03975 - ko00000 SNARE-like domain protein
PMDBBNKE_00706 3.3e-235 ykoT - - M - - - Glycosyl transferase family 2
PMDBBNKE_00707 0.0 - - - M - - - 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
PMDBBNKE_00708 5.72e-90 - - - S - - - NUDIX domain
PMDBBNKE_00709 0.0 - - - S - - - membrane
PMDBBNKE_00710 1.22e-217 ribD 1.1.1.193, 3.5.4.26 - H ko:K11752 ko00740,ko01100,ko01110,ko02024,map00740,map01100,map01110,map02024 ko00000,ko00001,ko00002,ko01000 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
PMDBBNKE_00711 8.71e-111 ribE 2.5.1.9 - H ko:K00793 ko00740,ko01100,ko01110,map00740,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Riboflavin synthase
PMDBBNKE_00712 5.12e-285 ribA 3.5.4.25, 4.1.99.12 - H ko:K02858,ko:K14652 ko00740,ko00790,ko01100,ko01110,map00740,map00790,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate
PMDBBNKE_00713 1.23e-106 ribH 2.5.1.78 - H ko:K00794 ko00740,ko01100,ko01110,map00740,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin
PMDBBNKE_00714 5.21e-137 - - - S ko:K09962 - ko00000 Nucleotidyltransferase
PMDBBNKE_00715 3.39e-138 - - - - - - - -
PMDBBNKE_00716 2.71e-150 crp2 - - K ko:K10914,ko:K21562 ko02020,ko02024,ko02025,ko02026,ko05111,map02020,map02024,map02025,map02026,map05111 ko00000,ko00001,ko03000 helix_turn_helix, cAMP Regulatory protein
PMDBBNKE_00717 4.89e-146 - - - K - - - Bacterial regulatory proteins, tetR family
PMDBBNKE_00718 5.19e-309 npr 1.11.1.1 - C ko:K05910 - ko00000,ko01000 NADH oxidase
PMDBBNKE_00719 0.0 - - - - - - - -
PMDBBNKE_00720 4.75e-80 - - - - - - - -
PMDBBNKE_00721 3.36e-248 - - - S - - - Fn3-like domain
PMDBBNKE_00722 2.31e-137 - - - S - - - WxL domain surface cell wall-binding
PMDBBNKE_00723 5.76e-135 - - - S - - - WxL domain surface cell wall-binding
PMDBBNKE_00724 1.09e-196 prsA 5.2.1.8 - M ko:K01802,ko:K07533 - ko00000,ko01000,ko03110 Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
PMDBBNKE_00725 7.9e-72 - - - - - - - -
PMDBBNKE_00726 3.6e-106 hit - - FG ko:K02503 - ko00000,ko04147 histidine triad
PMDBBNKE_00727 1.1e-174 ecsA - - V ko:K01990 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
PMDBBNKE_00728 8.17e-285 ecsB - - U ko:K01992 - ko00000,ko00002,ko02000 ABC transporter
PMDBBNKE_00729 7.24e-197 ytmP - - M - - - Choline/ethanolamine kinase
PMDBBNKE_00730 4.7e-156 trmB 2.1.1.33 - J ko:K03439 - ko00000,ko01000,ko03016 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
PMDBBNKE_00731 2.94e-71 ytzB - - S - - - Peptidase propeptide and YPEB domain
PMDBBNKE_00732 1.45e-145 ytpR - - J ko:K06878 - ko00000 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PMDBBNKE_00733 0.0 sftA - - D ko:K03466 - ko00000,ko03036 Belongs to the FtsK SpoIIIE SftA family
PMDBBNKE_00734 0.0 murC 6.3.2.8 - M ko:K01924 ko00471,ko00550,ko01100,map00471,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Belongs to the MurCDEF family
PMDBBNKE_00735 3.04e-29 - - - S - - - Virus attachment protein p12 family
PMDBBNKE_00736 0.0 feoB - - P ko:K04759 - ko00000,ko02000 transporter of a GTP-driven Fe(2 ) uptake system
PMDBBNKE_00737 2.87e-47 feoA - - P ko:K04758 - ko00000,ko02000 FeoA domain
PMDBBNKE_00738 1.1e-184 sufC - - O ko:K09013 - ko00000,ko02000 FeS assembly ATPase SufC
PMDBBNKE_00739 8.63e-310 sufD - - O ko:K07033,ko:K09015 - ko00000 FeS assembly protein SufD
PMDBBNKE_00740 1.83e-298 sufS 2.8.1.7, 4.4.1.16 - E ko:K11717 ko00450,ko01100,map00450,map01100 ko00000,ko00001,ko01000 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
PMDBBNKE_00741 2.71e-108 nifU - - C ko:K04488 - ko00000 SUF system FeS assembly protein, NifU family
PMDBBNKE_00742 0.0 sufB - - O ko:K07033,ko:K09014 - ko00000 assembly protein SufB
PMDBBNKE_00743 4.07e-60 - - - S - - - Iron-sulfur cluster assembly protein
PMDBBNKE_00744 1.04e-141 - - - K ko:K20480 ko02024,map02024 ko00000,ko00001,ko03000 Helix-turn-helix
PMDBBNKE_00745 8.51e-155 ybhL - - S ko:K06890 - ko00000 Belongs to the BI1 family
PMDBBNKE_00746 0.0 polA 2.7.7.7 - L ko:K02335 ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440 ko00000,ko00001,ko01000,ko03032,ko03400 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
PMDBBNKE_00747 3.19e-202 fpg 3.2.2.23, 4.2.99.18 - L ko:K10563 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
PMDBBNKE_00748 3.88e-133 coaE 2.7.1.24 - F ko:K00859 ko00770,ko01100,map00770,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
PMDBBNKE_00749 1.58e-117 nrdR - - K ko:K07738 - ko00000,ko03000 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
PMDBBNKE_00750 8.92e-317 dnaB - - L ko:K03346 - ko00000,ko03032 replication initiation and membrane attachment
PMDBBNKE_00751 6.05e-221 dnaI - - L ko:K11144 - ko00000,ko03032 Primosomal protein DnaI
PMDBBNKE_00752 0.0 thrS 6.1.1.3 - J ko:K01868 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
PMDBBNKE_00753 2.37e-109 infC - - J ko:K02520 - ko00000,ko03012,ko03029 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
PMDBBNKE_00754 6.92e-37 rpmI - - J ko:K02916 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL35 family
PMDBBNKE_00755 6.88e-73 rplT - - J ko:K02887 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
PMDBBNKE_00756 2.76e-74 - - - - - - - -
PMDBBNKE_00757 8.2e-306 - - - L ko:K07478 - ko00000 AAA C-terminal domain
PMDBBNKE_00758 4.11e-166 qor 1.1.1.1, 1.6.5.5 - C ko:K00001,ko:K00344 ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220 ko00000,ko00001,ko01000 Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily
PMDBBNKE_00759 1.64e-83 ydeP - - K - - - Transcriptional regulator, HxlR family
PMDBBNKE_00760 2.39e-175 racD 5.1.1.13 - G ko:K01779 ko00250,ko01054,map00250,map01054 ko00000,ko00001,ko01000 Belongs to the aspartate glutamate racemases family
PMDBBNKE_00761 9.51e-317 yijG - GT2 M ko:K11936 ko02026,map02026 ko00000,ko00001,ko01000,ko01003,ko02000 Glycosyl transferase
PMDBBNKE_00762 1.81e-113 - - - - - - - -
PMDBBNKE_00763 5.7e-127 yqeG - - S ko:K07015 - ko00000 HAD phosphatase, family IIIA
PMDBBNKE_00764 3.81e-276 yqeH - - S ko:K06948 - ko00000,ko03009 Ribosome biogenesis GTPase YqeH
PMDBBNKE_00765 2.19e-67 yhbY - - J ko:K07574 - ko00000,ko03009 RNA-binding protein
PMDBBNKE_00766 4.19e-153 nadD 2.7.7.18 - H ko:K00969 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
PMDBBNKE_00767 1.71e-149 yqeK - - H - - - Hydrolase, HD family
PMDBBNKE_00768 1.06e-76 rsfS - - J ko:K09710 - ko00000,ko03009 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
PMDBBNKE_00769 6.65e-180 yqeM - - Q - - - Methyltransferase
PMDBBNKE_00770 3.55e-279 ylbM - - S - - - Belongs to the UPF0348 family
PMDBBNKE_00771 3.66e-127 ylbN - - S ko:K07040 - ko00000 Uncharacterized ACR, COG1399
PMDBBNKE_00772 1.3e-125 - - - S - - - Peptidase propeptide and YPEB domain
PMDBBNKE_00773 8.93e-223 yeaB - - P - - - Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
PMDBBNKE_00774 0.0 gnd 1.1.1.343, 1.1.1.44 - H ko:K00033 ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
PMDBBNKE_00775 3.12e-311 rarA - - L ko:K07478 - ko00000 recombination factor protein RarA
PMDBBNKE_00776 1.38e-155 csrR - - K - - - response regulator
PMDBBNKE_00777 0.0 arlS 2.7.13.3 - T ko:K18940 ko02020,map02020 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Histidine kinase
PMDBBNKE_00778 1.93e-218 ubiA 2.5.1.74 - H ko:K02548 ko00130,ko01100,ko01110,map00130,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko01006 1,4-dihydroxy-2-naphthoate
PMDBBNKE_00779 0.0 sbcC - - L ko:K03546 - ko00000,ko03400 Putative exonuclease SbcCD, C subunit
PMDBBNKE_00780 2.36e-289 sbcD - - L ko:K03547 - ko00000,ko03400 SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity
PMDBBNKE_00781 1.21e-129 - - - S - - - SdpI/YhfL protein family
PMDBBNKE_00782 1.4e-208 yidC - - U ko:K03217 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044,ko03029 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PMDBBNKE_00783 1.37e-59 acyP 3.6.1.7 - C ko:K01512 ko00620,ko00627,ko01120,map00620,map00627,map01120 ko00000,ko00001,ko01000 Belongs to the acylphosphatase family
PMDBBNKE_00784 4.46e-179 spoU - - J ko:K03437 - ko00000,ko03016 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PMDBBNKE_00785 1.72e-120 XK27_09705 - - S ko:K06950 - ko00000 Metal dependent phosphohydrolases with conserved 'HD' motif.
PMDBBNKE_00786 1.09e-83 yodB - - K - - - Transcriptional regulator, HxlR family
PMDBBNKE_00787 6.88e-257 pheS 6.1.1.20 - J ko:K01889 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
PMDBBNKE_00788 0.0 pheT 6.1.1.20 - J ko:K01890 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PMDBBNKE_00789 6.11e-249 mltG - - S ko:K07082 - ko00000 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
PMDBBNKE_00790 7.5e-146 udk 2.7.1.48 - F ko:K00876 ko00240,ko00983,ko01100,map00240,map00983,map01100 ko00000,ko00001,ko01000 Cytidine monophosphokinase
PMDBBNKE_00791 1.09e-105 greA - - K ko:K03624 - ko00000,ko03021 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PMDBBNKE_00792 9.72e-146 - - - S - - - membrane
PMDBBNKE_00793 5.72e-99 - - - K - - - LytTr DNA-binding domain
PMDBBNKE_00794 6.12e-72 yneR - - S - - - Belongs to the HesB IscA family
PMDBBNKE_00795 0.0 - - - S - - - membrane
PMDBBNKE_00796 0.0 pbp2b - - M ko:K00687,ko:K12553,ko:K21465,ko:K21466 ko00550,ko01100,ko01501,map00550,map01100,map01501 ko00000,ko00001,ko01000,ko01011 Penicillin-binding Protein
PMDBBNKE_00797 5.33e-30 rpmG - - J ko:K02913 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL33 family
PMDBBNKE_00798 9.29e-132 fthC 6.3.3.2 - H ko:K01934 ko00670,ko01100,map00670,map01100 ko00000,ko00001,ko01000 Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
PMDBBNKE_00799 3.52e-153 gluP 3.4.21.105 - S ko:K19225 - ko00000,ko01000,ko01002 Peptidase, S54 family
PMDBBNKE_00800 6.33e-46 yqgQ - - S - - - Bacterial protein of unknown function (DUF910)
PMDBBNKE_00801 2.6e-231 glcK 2.7.1.2 - G ko:K00845 ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Glucokinase
PMDBBNKE_00802 4.65e-141 pepE 3.4.13.21 - E ko:K05995 - ko00000,ko01000,ko01002 Belongs to the peptidase S51 family
PMDBBNKE_00803 6.68e-89 yqhL - - P - - - Rhodanese-like protein
PMDBBNKE_00804 1.44e-31 WQ51_02665 - - S - - - Protein of unknown function (DUF3042)
PMDBBNKE_00805 1.83e-177 glpQ 3.1.4.46 - C ko:K01126 ko00564,map00564 ko00000,ko00001,ko01000 phosphodiesterase
PMDBBNKE_00806 1.33e-224 miaA 2.5.1.75 - F ko:K00791 ko00908,ko01100,ko01110,map00908,map01100,map01110 ko00000,ko00001,ko01000,ko01006,ko03016 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
PMDBBNKE_00807 7.79e-85 glnR - - K ko:K03713,ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000,ko03000 Transcriptional regulator
PMDBBNKE_00808 0.0 glnA 6.3.1.2 - E ko:K01915 ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727 ko00000,ko00001,ko01000,ko04147 glutamine synthetase
PMDBBNKE_00809 4.11e-206 - - - - - - - -
PMDBBNKE_00810 1.34e-232 - - - - - - - -
PMDBBNKE_00811 3.55e-127 - - - S - - - Protein conserved in bacteria
PMDBBNKE_00812 7.63e-74 - - - - - - - -
PMDBBNKE_00813 2.97e-41 - - - - - - - -
PMDBBNKE_00816 9.81e-27 - - - - - - - -
PMDBBNKE_00817 8.15e-125 - - - K - - - Transcriptional regulator
PMDBBNKE_00818 1.55e-66 rplU - - J ko:K02888 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This protein binds to 23S rRNA in the presence of protein L20
PMDBBNKE_00819 7.97e-71 ysxB - - J ko:K07584 - ko00000 Cysteine protease Prp
PMDBBNKE_00820 2.33e-61 rpmA - - J ko:K02899 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL27 family
PMDBBNKE_00821 6.04e-249 pepP 3.4.11.9, 3.4.13.9 - E ko:K01262,ko:K01271 - ko00000,ko01000,ko01002 Creatinase/Prolidase N-terminal domain
PMDBBNKE_00822 1.43e-129 efp - - J ko:K02356 - ko00000,ko03012 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
PMDBBNKE_00823 1.7e-96 WQ51_04310 - - S ko:K10947 - ko00000,ko03000 Asp23 family, cell envelope-related function
PMDBBNKE_00824 9.43e-90 nusB - - K ko:K03625 - ko00000,ko03009,ko03021 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
PMDBBNKE_00825 4.82e-194 folD 1.5.1.5, 3.5.4.9 - F ko:K01491 ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
PMDBBNKE_00826 3.99e-313 xseA 3.1.11.6 - L ko:K03601 ko03430,map03430 ko00000,ko00001,ko01000,ko03400 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PMDBBNKE_00827 7.55e-44 xseB 3.1.11.6 - L ko:K03602 ko03430,map03430 ko00000,ko00001,ko01000,ko03400 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PMDBBNKE_00828 5.49e-205 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29 - H ko:K13789 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000,ko01006 Belongs to the FPP GGPP synthase family
PMDBBNKE_00829 4.49e-192 rrmJ 2.1.1.226, 2.1.1.227 - J ko:K06442 - ko00000,ko01000,ko03009 Ribosomal RNA large subunit methyltransferase J
PMDBBNKE_00830 5.28e-100 argR2 - - K ko:K03402 - ko00000,ko03000 Regulates arginine biosynthesis genes
PMDBBNKE_00831 0.0 recN - - L ko:K03631 - ko00000,ko03400 May be involved in recombinational repair of damaged DNA
PMDBBNKE_00832 4.51e-284 opuCA - - E ko:K05847 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter, ATP-binding protein
PMDBBNKE_00833 7.11e-135 opuCB - - E ko:K05846 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter permease
PMDBBNKE_00834 3.8e-224 opuCC - - M ko:K05845 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Periplasmic glycine betaine choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)
PMDBBNKE_00835 1.36e-136 opuCD - - P ko:K05846 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
PMDBBNKE_00836 2.38e-72 - - - - - - - -
PMDBBNKE_00837 6.96e-145 gmk 2.7.4.8 - F ko:K00942 ko00230,ko01100,map00230,map01100 ko00000,ko00001,ko00002,ko01000 Essential for recycling GMP and indirectly, cGMP
PMDBBNKE_00838 3.93e-41 rpoZ 2.7.7.6 - K ko:K03060 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
PMDBBNKE_00839 5.04e-278 coaBC 4.1.1.36, 6.3.2.5 - H ko:K01598,ko:K13038 ko00770,ko01100,map00770,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
PMDBBNKE_00840 0.0 priA - - L ko:K04066 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
PMDBBNKE_00841 1.49e-224 fmt 2.1.2.9 - J ko:K00604 ko00670,ko00970,map00670,map00970 ko00000,ko00001,ko01000 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
PMDBBNKE_00842 0.0 sun 2.1.1.176 - J ko:K03500 - ko00000,ko01000,ko03009 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
PMDBBNKE_00843 1.62e-173 stp 3.1.3.16 - T ko:K20074 - ko00000,ko01000,ko01009 phosphatase
PMDBBNKE_00844 0.0 prkC 2.7.11.1 - KLT ko:K08884,ko:K12132 - ko00000,ko01000,ko01001 serine threonine protein kinase
PMDBBNKE_00845 9.9e-209 rsgA 3.1.3.100 - S ko:K06949 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko01000,ko03009 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
PMDBBNKE_00846 2.22e-151 rpe 5.1.3.1 - G ko:K01783 ko00030,ko00040,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the ribulose-phosphate 3-epimerase family
PMDBBNKE_00847 2.61e-160 thiN 2.7.6.2 - H ko:K00949 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko01000 thiamine pyrophosphokinase
PMDBBNKE_00848 1.61e-36 rpmB - - J ko:K02902 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL28 family
PMDBBNKE_00849 7.09e-76 yloU - - S - - - Asp23 family, cell envelope-related function
PMDBBNKE_00850 0.0 yloV - - S ko:K07030 - ko00000 DAK2 domain fusion protein YloV
PMDBBNKE_00851 0.0 recG 3.6.4.12 - L ko:K03655 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
PMDBBNKE_00852 1.79e-243 plsX 2.3.1.15 - I ko:K03621 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko01004 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
PMDBBNKE_00853 3.33e-47 acpP - - IQ ko:K02078 - ko00000,ko00001 Carrier of the growing fatty acid chain in fatty acid biosynthesis
PMDBBNKE_00854 4.49e-167 rnc 3.1.26.3 - J ko:K03685 ko03008,ko05205,map03008,map05205 ko00000,ko00001,ko01000,ko03009,ko03019,ko03036 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
PMDBBNKE_00855 0.0 smc - - D ko:K03529 - ko00000,ko03036 Required for chromosome condensation and partitioning
PMDBBNKE_00856 2.34e-278 ftsY - - U ko:K03110 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
PMDBBNKE_00857 1.46e-77 ylxM - - S ko:K09787 - ko00000 Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
PMDBBNKE_00858 7.69e-300 ffh 3.6.5.4 - U ko:K03106 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko01000,ko02044 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
PMDBBNKE_00859 1.6e-58 rpsP - - J ko:K02959 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011,ko03029 Belongs to the bacterial ribosomal protein bS16 family
PMDBBNKE_00860 9.99e-53 ylqC - - S ko:K06960 - ko00000 Belongs to the UPF0109 family
PMDBBNKE_00861 2.24e-123 rimM - - J ko:K02860 - ko00000,ko03009 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
PMDBBNKE_00862 1.57e-179 trmD 2.1.1.228 - J ko:K00554 - ko00000,ko01000,ko03016 Belongs to the RNA methyltransferase TrmD family
PMDBBNKE_00863 3.15e-78 rplS - - J ko:K02884 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
PMDBBNKE_00864 1.03e-66 - - - - - - - -
PMDBBNKE_00865 0.0 - - - M - - - LPXTG-motif cell wall anchor domain protein
PMDBBNKE_00866 1.1e-112 - - - - - - - -
PMDBBNKE_00867 2.05e-179 ecsA_2 - - V ko:K01990 - ko00000,ko00002,ko02000 AAA domain, putative AbiEii toxin, Type IV TA system
PMDBBNKE_00868 0.0 XK27_00765 - - - ko:K01992 - ko00000,ko00002,ko02000 -
PMDBBNKE_00870 0.0 trpE 4.1.3.27 - EH ko:K01657 ko00400,ko00405,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00400,map00405,map01100,map01110,map01130,map01230,map02024,map02025 ko00000,ko00001,ko00002,ko01000 Anthranilate synthase component I, N terminal region
PMDBBNKE_00871 8.08e-135 trpG 4.1.3.27 - EH ko:K01658 ko00400,ko00405,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00400,map00405,map01100,map01110,map01130,map01230,map02024,map02025 ko00000,ko00001,ko00002,ko01000 Peptidase C26
PMDBBNKE_00872 4.06e-224 trpD 2.4.2.18, 4.1.3.27 - F ko:K00766,ko:K13497 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
PMDBBNKE_00873 6.06e-159 trpC 4.1.1.48, 5.3.1.24 - E ko:K01609,ko:K13498 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the TrpC family
PMDBBNKE_00874 1.51e-140 trpF 5.3.1.24 - E ko:K01817 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the TrpF family
PMDBBNKE_00875 5.13e-287 trpB 4.2.1.20, 5.3.1.24 - E ko:K01696,ko:K01817 ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
PMDBBNKE_00876 2.79e-182 trpA 4.2.1.20 - E ko:K01695 ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
PMDBBNKE_00877 1.45e-126 entB - - Q - - - Isochorismatase family
PMDBBNKE_00878 3.53e-227 - 1.6.5.5 - C ko:K00344 - ko00000,ko01000 Zinc-binding dehydrogenase
PMDBBNKE_00879 1.95e-88 ybbJ - - K - - - Acetyltransferase (GNAT) family
PMDBBNKE_00880 1.62e-276 - - - E - - - glutamate:sodium symporter activity
PMDBBNKE_00881 1.61e-272 hipO1 - - E ko:K21613 - ko00000,ko01000,ko01002 Peptidase family M20/M25/M40
PMDBBNKE_00882 1.56e-251 adhB 1.1.1.1 - E ko:K00001 ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220 ko00000,ko00001,ko01000 alcohol dehydrogenase
PMDBBNKE_00883 2.12e-77 - - - S - - - Protein of unknown function (DUF1648)
PMDBBNKE_00884 6.84e-186 yneD - - S - - - Belongs to the short-chain dehydrogenases reductases (SDR) family
PMDBBNKE_00885 8.02e-230 yneE - - K - - - Transcriptional regulator
PMDBBNKE_00886 8.55e-99 fabZ 4.2.1.59 - I ko:K02372 ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
PMDBBNKE_00887 1.97e-230 fabH 2.3.1.180 - I ko:K00648 ko00061,ko01100,ko01212,map00061,map01100,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
PMDBBNKE_00888 6.16e-48 acpP - - IQ ko:K02078 - ko00000,ko00001 Carrier of the growing fatty acid chain in fatty acid biosynthesis
PMDBBNKE_00889 2.97e-216 fabD 2.3.1.39 - I ko:K00645,ko:K15327,ko:K15329 ko00061,ko00333,ko01100,ko01130,ko01212,map00061,map00333,map01100,map01130,map01212 ko00000,ko00001,ko00002,ko01000,ko01004,ko01008 Malonyl CoA-acyl carrier protein transacylase
PMDBBNKE_00890 1.26e-162 fabG 1.1.1.100 - IQ ko:K00059 ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 reductase
PMDBBNKE_00891 4.42e-289 fabF 2.3.1.179 - I ko:K09458 ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
PMDBBNKE_00892 5.25e-96 accB - - I ko:K02160 ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212 ko00000,ko00001,ko00002 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
PMDBBNKE_00893 7.23e-93 fabZ2 4.2.1.59 - I ko:K02372 ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 FabA-like domain
PMDBBNKE_00894 0.0 accC 6.3.4.14, 6.4.1.2 - I ko:K01961 ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212 ko00000,ko00001,ko00002,ko01000 Acetyl-CoA carboxylase biotin carboxylase subunit
PMDBBNKE_00895 2.62e-202 accD 2.1.3.15, 6.4.1.2 - I ko:K01963 ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212 ko00000,ko00001,ko00002,ko01000 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
PMDBBNKE_00896 1.96e-178 accA 2.1.3.15, 6.4.1.2 - I ko:K01962 ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212 ko00000,ko00001,ko00002,ko01000 alpha subunit
PMDBBNKE_00897 5.4e-174 fabI 1.3.1.10, 1.3.1.9 - I ko:K00208 ko00061,ko00333,ko00780,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01100,map01130,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 Enoyl- acyl-carrier-protein reductase NADH
PMDBBNKE_00898 1.01e-128 - - - H ko:K06133 ko00770,map00770 ko00000,ko00001,ko01000 Belongs to the P-Pant transferase superfamily
PMDBBNKE_00899 3.64e-162 - - - S ko:K07150 - ko00000 Protein of unknown function (DUF554)
PMDBBNKE_00900 1.07e-206 - - - K - - - LysR substrate binding domain
PMDBBNKE_00901 4.94e-114 ykhA - - I - - - Thioesterase superfamily
PMDBBNKE_00902 2.66e-247 rsgA_2 3.1.3.100 - S ko:K06949 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko01000,ko03009 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
PMDBBNKE_00903 2.46e-120 - - - K - - - transcriptional regulator
PMDBBNKE_00904 0.0 - - - EGP - - - Major Facilitator
PMDBBNKE_00905 6.56e-193 - - - O - - - Band 7 protein
PMDBBNKE_00906 8.14e-47 - - - L - - - Pfam:Integrase_AP2
PMDBBNKE_00910 1.19e-13 - - - - - - - -
PMDBBNKE_00912 2.1e-71 - - - - - - - -
PMDBBNKE_00913 1.42e-39 - - - - - - - -
PMDBBNKE_00914 1.69e-276 cfa 2.1.1.79 - M ko:K00574 - ko00000,ko01000 cyclopropane-fatty-acyl-phospholipid synthase
PMDBBNKE_00915 9.96e-147 - 1.14.99.53 AA10 S ko:K21713 - ko00000,ko01000 Lytic polysaccharide mono-oxygenase, cellulose-degrading
PMDBBNKE_00916 3.16e-64 ycnE - - S - - - Antibiotic biosynthesis monooxygenase
PMDBBNKE_00917 2.05e-55 - - - - - - - -
PMDBBNKE_00918 4.98e-107 tspO - - T ko:K05770 ko04080,ko04214,ko04979,ko05166,map04080,map04214,map04979,map05166 ko00000,ko00001,ko02000 TspO/MBR family
PMDBBNKE_00919 3.05e-99 - - - T - - - Belongs to the universal stress protein A family
PMDBBNKE_00920 3.92e-87 - - - S - - - Protein of unknown function (DUF805)
PMDBBNKE_00921 1.79e-211 - - - I - - - Diacylglycerol kinase catalytic domain
PMDBBNKE_00922 6.16e-48 - - - - - - - -
PMDBBNKE_00923 5.79e-21 - - - - - - - -
PMDBBNKE_00924 2.22e-55 - - - S - - - transglycosylase associated protein
PMDBBNKE_00925 4e-40 - - - S - - - CsbD-like
PMDBBNKE_00926 1.06e-53 - - - - - - - -
PMDBBNKE_00927 0.0 pepD4 - - E ko:K08659 - ko00000,ko01000,ko01002 Dipeptidase
PMDBBNKE_00928 4.87e-37 dmpI 5.3.2.6 - G ko:K01821 ko00362,ko00621,ko00622,ko01100,ko01120,ko01220,map00362,map00621,map00622,map01100,map01120,map01220 ko00000,ko00001,ko00002,ko01000 Belongs to the 4-oxalocrotonate tautomerase family
PMDBBNKE_00929 0.0 lysA 4.1.1.20 - E ko:K01586 ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
PMDBBNKE_00930 2.1e-218 - 2.5.1.74 - H ko:K02548 ko00130,ko01100,ko01110,map00130,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko01006 UbiA prenyltransferase family
PMDBBNKE_00931 5.03e-182 - - - U ko:K10716 - ko00000,ko02000 Ion channel
PMDBBNKE_00932 1.52e-67 - - - - - - - -
PMDBBNKE_00933 2.12e-57 - - - - - - - -
PMDBBNKE_00934 0.0 gabT 2.6.1.19, 5.1.1.21 - E ko:K00823,ko:K20708 ko00250,ko00410,ko00640,ko00650,ko01100,ko01120,map00250,map00410,map00640,map00650,map01100,map01120 ko00000,ko00001,ko00002,ko01000,ko01007 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
PMDBBNKE_00935 0.0 - - - E ko:K03294 - ko00000 Amino Acid
PMDBBNKE_00936 3.86e-192 yitU 3.1.3.104 - S ko:K21064 ko00740,ko01100,ko01110,map00740,map01100,map01110 ko00000,ko00001,ko00002,ko01000 hydrolase
PMDBBNKE_00937 0.0 rsmF - - J - - - NOL1 NOP2 sun family protein
PMDBBNKE_00938 2.39e-157 - - - S - - - Domain of unknown function (DUF4767)
PMDBBNKE_00939 0.0 malT - - G ko:K16211 - ko00000,ko02000 Major Facilitator
PMDBBNKE_00940 0.0 mapA 2.4.1.8 GH65 G ko:K00691 ko00500,ko01100,map00500,map01100 ko00000,ko00001,ko01000 hydrolase, family 65, central catalytic
PMDBBNKE_00941 9.23e-245 galM2 5.1.3.3 - G ko:K01785 ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the interconversion of alpha and beta anomers of maltose
PMDBBNKE_00942 1.01e-249 fni 5.3.3.2 - C ko:K01823 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
PMDBBNKE_00943 1.77e-262 mvaK2 2.7.4.2 - I ko:K00938 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 phosphomevalonate kinase
PMDBBNKE_00944 1.1e-230 mvaD 4.1.1.33 - I ko:K01597 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 diphosphomevalonate decarboxylase
PMDBBNKE_00945 1.48e-217 mvk 2.7.1.36 - I ko:K00869 ko00900,ko01100,ko01110,ko01130,ko04146,map00900,map01100,map01110,map01130,map04146 ko00000,ko00001,ko00002,ko01000 mevalonate kinase
PMDBBNKE_00946 0.0 dinG 3.6.4.12 - L ko:K03722 - ko00000,ko01000,ko03400 helicase involved in DNA repair and perhaps also replication
PMDBBNKE_00947 2.53e-107 ypmB - - S - - - protein conserved in bacteria
PMDBBNKE_00948 3.1e-289 aspB 2.6.1.1, 2.6.1.14 - E ko:K00812,ko:K22457 ko00220,ko00250,ko00270,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko01000,ko01007 Aminotransferase
PMDBBNKE_00949 0.0 asnS 6.1.1.22 - J ko:K01893 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Asparaginyl-tRNA synthetase
PMDBBNKE_00950 1.13e-165 dnaD - - L ko:K02086 - ko00000 Replication initiation and membrane attachment
PMDBBNKE_00952 2.32e-238 metN - - P ko:K02071 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
PMDBBNKE_00953 2.45e-142 metI - - P ko:K02072 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter permease
PMDBBNKE_00954 1.3e-202 metQ1 - - P ko:K02073 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Belongs to the nlpA lipoprotein family
PMDBBNKE_00955 5.32e-109 - - - T - - - Universal stress protein family
PMDBBNKE_00956 0.0 ftpA - - P ko:K02011 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
PMDBBNKE_00957 3.28e-233 ftpB - - P ko:K02012 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Bacterial extracellular solute-binding protein
PMDBBNKE_00958 2.8e-229 phnT 3.6.3.30 - P ko:K02010 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ATPases associated with a variety of cellular activities
PMDBBNKE_00959 0.0 ponA 2.4.1.129, 3.4.16.4 GT51 M ko:K05366 ko00550,ko01100,ko01501,map00550,map01100,map01501 ko00000,ko00001,ko01000,ko01003,ko01011 penicillin-binding protein 1A
PMDBBNKE_00960 3.6e-152 recU - - L ko:K03700 - ko00000,ko03400 Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
PMDBBNKE_00961 2.12e-142 ypsA - - S - - - Belongs to the UPF0398 family
PMDBBNKE_00962 9.98e-75 gpsB - - D - - - Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
PMDBBNKE_00964 4.11e-282 ypsC - - L ko:K07444 - ko00000,ko01000 Belongs to the methyltransferase superfamily
PMDBBNKE_00966 1.7e-185 yitV - - S ko:K06889 - ko00000 COG1073 Hydrolases of the alpha beta superfamily
PMDBBNKE_00967 2.26e-95 - - - S - - - SnoaL-like domain
PMDBBNKE_00968 3.2e-254 - - - M - - - Glycosyltransferase, group 2 family protein
PMDBBNKE_00969 2.85e-266 mccF - - V - - - LD-carboxypeptidase
PMDBBNKE_00970 1.66e-101 - - - K - - - Acetyltransferase (GNAT) domain
PMDBBNKE_00971 6.1e-312 - - - M ko:K07273 - ko00000 hydrolase, family 25
PMDBBNKE_00972 1.44e-234 - - - V - - - LD-carboxypeptidase
PMDBBNKE_00973 1.99e-159 - - - - ko:K01992 - ko00000,ko00002,ko02000 -
PMDBBNKE_00974 3.99e-158 - - - P ko:K01990 - ko00000,ko00002,ko02000 ATPases associated with a variety of cellular activities
PMDBBNKE_00975 1.37e-248 - - - - - - - -
PMDBBNKE_00976 1.5e-186 - - - S - - - hydrolase activity, acting on ester bonds
PMDBBNKE_00977 1.47e-268 yurR 1.4.5.1 - E ko:K00285 ko00360,map00360 ko00000,ko00001,ko01000 FAD dependent oxidoreductase
PMDBBNKE_00978 3.28e-87 rnhA 3.1.26.4 - L ko:K03469 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 Ribonuclease HI
PMDBBNKE_00979 5.04e-82 esbA - - S - - - Family of unknown function (DUF5322)
PMDBBNKE_00980 0.0 fhs 6.3.4.3 - F ko:K01938 ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Belongs to the formate--tetrahydrofolate ligase family
PMDBBNKE_00981 1.65e-97 lspA 3.4.23.36 - MU ko:K03101 ko03060,map03060 ko00000,ko00001,ko01000,ko01002 This protein specifically catalyzes the removal of signal peptides from prolipoproteins
PMDBBNKE_00982 9.72e-225 rluD 5.4.99.23 - J ko:K06180 - ko00000,ko01000,ko03009 Responsible for synthesis of pseudouridine from uracil
PMDBBNKE_00983 1.9e-115 pyrR 2.4.2.9 - F ko:K02825 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko01000,ko03000 Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
PMDBBNKE_00984 4.89e-263 carA 6.3.5.5 - F ko:K01956 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the CarA family
PMDBBNKE_00985 0.0 carB 6.3.5.5 - F ko:K01955 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Carbamoyl-phosphate synthase
PMDBBNKE_00986 0.0 - - - S - - - Bacterial membrane protein, YfhO
PMDBBNKE_00987 2.01e-145 - - - G - - - Phosphoglycerate mutase family
PMDBBNKE_00988 1.9e-93 frataxin - - S ko:K05937 - ko00000 Domain of unknown function (DU1801)
PMDBBNKE_00991 1.92e-168 cat 2.3.1.28 - V ko:K19271 - br01600,ko00000,ko01000,ko01504 Chloramphenicol acetyltransferase
PMDBBNKE_00992 2.08e-92 - - - S - - - LuxR family transcriptional regulator
PMDBBNKE_00993 1.19e-176 - - - S - - - Uncharacterized protein conserved in bacteria (DUF2087)
PMDBBNKE_00995 1.87e-117 - - - F - - - NUDIX domain
PMDBBNKE_00996 6.19e-208 - - - V ko:K01990 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
PMDBBNKE_00997 9.28e-171 - - - S ko:K01992 - ko00000,ko00002,ko02000 ABC-2 family transporter protein
PMDBBNKE_00998 0.0 FbpA - - K - - - Fibronectin-binding protein
PMDBBNKE_00999 1.97e-87 - - - K - - - Transcriptional regulator
PMDBBNKE_01000 1.11e-205 - - - S - - - EDD domain protein, DegV family
PMDBBNKE_01001 2.47e-101 yjcF 3.5.4.33, 4.4.1.8 - K ko:K02348,ko:K11991,ko:K14155 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 ko00000,ko00001,ko01000,ko01007,ko03016 protein acetylation
PMDBBNKE_01002 2.9e-170 - - - S - - - Protein of unknown function (DUF975)
PMDBBNKE_01003 3.03e-40 - - - - - - - -
PMDBBNKE_01004 5.59e-64 - - - - - - - -
PMDBBNKE_01005 6.64e-189 - - - C - - - Domain of unknown function (DUF4931)
PMDBBNKE_01006 3.87e-264 pmrB - - EGP - - - Major Facilitator Superfamily
PMDBBNKE_01008 1.33e-67 XK27_08430 - - S - - - Staphylococcal protein of unknown function (DUF960)
PMDBBNKE_01009 2.98e-166 yejC - - S - - - Protein of unknown function (DUF1003)
PMDBBNKE_01010 2.59e-177 XK27_00890 - - S ko:K08974 - ko00000 Domain of unknown function (DUF368)
PMDBBNKE_01011 4.31e-312 aapA - - E ko:K03293,ko:K11737 - ko00000,ko02000 Amino acid permease
PMDBBNKE_01012 1.3e-174 - - - - - - - -
PMDBBNKE_01013 7.79e-78 - - - - - - - -
PMDBBNKE_01014 0.0 lctP - - C ko:K03303 - ko00000,ko02000 L-lactate permease
PMDBBNKE_01015 6.75e-290 - - - - - - - -
PMDBBNKE_01016 2.91e-164 tarI 2.7.7.40, 2.7.7.60 - I ko:K00991,ko:K21030 ko00040,ko00900,ko01100,ko01110,ko01130,map00040,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of the cytidylyl group of CTP to D-ribitol 5-phosphate
PMDBBNKE_01017 2.44e-242 tarJ 1.1.1.137, 1.1.1.405 - E ko:K05352,ko:K21680 ko00040,ko01100,map00040,map01100 ko00000,ko00001,ko01000 Catalyzes the NADPH dependent reduction of D-ribulose 5- phosphate to D-ribitol 5-phosphate
PMDBBNKE_01018 3.21e-247 tarK 2.7.8.14, 2.7.8.46, 2.7.8.47 - H ko:K18704,ko:K21592 - ko00000,ko01000 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
PMDBBNKE_01019 0.0 tarL 2.7.8.14, 2.7.8.47 - H ko:K18704 - ko00000,ko01000 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
PMDBBNKE_01020 2.6e-118 paiA 2.3.1.57 - K ko:K22441 - ko00000,ko01000 Acetyltransferase (GNAT) domain
PMDBBNKE_01021 1.6e-93 - - - K - - - helix_turn_helix multiple antibiotic resistance protein
PMDBBNKE_01022 3.22e-304 gshR1 1.8.1.7 - C ko:K00383 ko00480,ko04918,map00480,map04918 ko00000,ko00001,ko01000 Glutathione reductase
PMDBBNKE_01023 1.98e-66 - - - - - - - -
PMDBBNKE_01024 4.49e-315 - - - M - - - Glycosyl transferase family group 2
PMDBBNKE_01025 0.0 - - - M - - - 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
PMDBBNKE_01026 5.95e-203 - - - L - - - Phage integrase, N-terminal SAM-like domain
PMDBBNKE_01027 1.07e-43 - - - S - - - YozE SAM-like fold
PMDBBNKE_01028 9.17e-126 msrA 1.8.4.11, 1.8.4.12 - O ko:K07304,ko:K12267 - ko00000,ko01000 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PMDBBNKE_01029 3.8e-105 msrB 1.8.4.12 - O ko:K07305 - ko00000,ko01000 peptide methionine sulfoxide reductase
PMDBBNKE_01030 3.21e-215 ppaC 3.6.1.1 - C ko:K15986 ko00190,map00190 ko00000,ko00001,ko01000 inorganic pyrophosphatase
PMDBBNKE_01031 1.56e-227 - - - K - - - Transcriptional regulator
PMDBBNKE_01032 0.0 parC - - L ko:K02621 - ko00000,ko01000,ko02048,ko03032,ko03036 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PMDBBNKE_01033 0.0 parE - - L ko:K02622 - ko00000,ko01000,ko02048,ko03032,ko03036 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PMDBBNKE_01034 2.4e-137 plsY 2.3.1.15 - I ko:K08591 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko01004 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
PMDBBNKE_01035 1.27e-217 lacX 5.1.3.3 - G ko:K01785 ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130 ko00000,ko00001,ko00002,ko01000 Aldose 1-epimerase
PMDBBNKE_01036 0.0 hslU - - O ko:K03667 - ko00000,ko03110 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
PMDBBNKE_01037 6.84e-121 hslV 3.4.25.2 - O ko:K01419 - ko00000,ko01000,ko01002 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
PMDBBNKE_01038 1.5e-227 xerC - - D ko:K03733,ko:K04763 - ko00000,ko03036 Belongs to the 'phage' integrase family. XerC subfamily
PMDBBNKE_01039 0.0 trmFO 2.1.1.74 - J ko:K04094 - ko00000,ko01000,ko03016,ko03036 Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
PMDBBNKE_01040 0.0 topA 5.99.1.2 - L ko:K03168 - ko00000,ko01000,ko03032,ko03400 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
PMDBBNKE_01041 1.1e-200 dprA - - LU ko:K04096 - ko00000 DNA protecting protein DprA
PMDBBNKE_01042 2.04e-175 rnhB 3.1.26.4 - L ko:K03470 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PMDBBNKE_01043 1.85e-206 rbgA - - S ko:K14540 - ko00000,ko03009 Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
PMDBBNKE_01045 5.13e-292 XK27_05470 - - E - - - Methionine synthase
PMDBBNKE_01046 7.05e-219 cpsY - - K - - - Transcriptional regulator, LysR family
PMDBBNKE_01047 1.23e-160 - 1.5.1.40 - S ko:K06988 - ko00000,ko01000 NADP oxidoreductase coenzyme F420-dependent
PMDBBNKE_01048 2.48e-252 XK27_00915 - - C - - - Luciferase-like monooxygenase
PMDBBNKE_01049 0.0 qacA - - EGP - - - Major Facilitator
PMDBBNKE_01050 0.0 ctpA 3.4.21.102 - M ko:K03797 - ko00000,ko01000,ko01002 Belongs to the peptidase S41A family
PMDBBNKE_01051 9.33e-48 yozE - - S - - - Belongs to the UPF0346 family
PMDBBNKE_01052 3.29e-147 ypmS - - S - - - Uncharacterized protein conserved in bacteria (DUF2140)
PMDBBNKE_01053 2.4e-208 XK27_03630 - - E - - - GDSL-like Lipase/Acylhydrolase
PMDBBNKE_01054 2.88e-189 WQ51_01275 - - S - - - EDD domain protein, DegV family
PMDBBNKE_01055 1.8e-119 folA 1.5.1.3 - H ko:K00287 ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523 ko00000,ko00001,ko00002,ko01000 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
PMDBBNKE_01056 6.7e-241 thyA 2.1.1.45 - F ko:K00560 ko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523 ko00000,ko00001,ko00002,ko01000 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
PMDBBNKE_01057 0.0 yfmR - - S ko:K15738 - ko00000,ko02000 ABC transporter, ATP-binding protein
PMDBBNKE_01058 6.46e-109 - - - - - - - -
PMDBBNKE_01059 8.95e-292 cca 2.7.7.72 - J ko:K00974 ko03013,map03013 ko00000,ko00001,ko01000,ko03016 Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
PMDBBNKE_01060 1.39e-185 dapB 1.17.1.8 - E ko:K00215 ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
PMDBBNKE_01061 3.71e-192 - 3.1.3.102, 3.1.3.104 - S ko:K20861 ko00740,ko01100,ko01110,map00740,map01100,map01110 ko00000,ko00001,ko00002,ko01000 hydrolase
PMDBBNKE_01062 5.96e-284 XK27_05225 - - S - - - Tetratricopeptide repeat protein
PMDBBNKE_01063 5.57e-55 hup - - L ko:K03530 - ko00000,ko03032,ko03036,ko03400 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
PMDBBNKE_01064 2.06e-314 der - - S ko:K03977 - ko00000,ko03009 GTPase that plays an essential role in the late steps of ribosome biogenesis
PMDBBNKE_01065 1.98e-281 rpsA - - J ko:K02945 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal protein S1
PMDBBNKE_01066 1.27e-151 cmk 2.7.4.25 - F ko:K00945 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the cytidylate kinase family. Type 1 subfamily
PMDBBNKE_01067 1.25e-39 - - - M - - - Lysin motif
PMDBBNKE_01068 0.0 recQ 3.6.4.12 - L ko:K03654 ko03018,map03018 ko00000,ko00001,ko01000,ko03400 ATP-dependent DNA helicase RecQ
PMDBBNKE_01069 3.38e-252 - - - S - - - Helix-turn-helix domain
PMDBBNKE_01070 5.28e-125 ribU - - U - - - Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
PMDBBNKE_01071 2.69e-167 rluB 5.4.99.22 - J ko:K06178 - ko00000,ko01000,ko03009 Belongs to the pseudouridine synthase RsuA family
PMDBBNKE_01072 1.3e-132 scpB - - D ko:K06024 - ko00000,ko03036 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
PMDBBNKE_01073 1.18e-174 scpA - - D ko:K05896 - ko00000,ko03036 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
PMDBBNKE_01074 3.99e-92 ribT - - K ko:K02859 - ko00000 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PMDBBNKE_01075 3.13e-211 xerD - - D ko:K04763 - ko00000,ko03036 recombinase XerD
PMDBBNKE_01076 7.94e-218 yitL - - S ko:K00243 - ko00000 S1 domain
PMDBBNKE_01077 2.51e-98 ytwI - - S - - - Protein of unknown function (DUF441)
PMDBBNKE_01078 0.0 pyk 2.7.1.40 - G ko:K00873 ko00010,ko00230,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko04930,ko05165,ko05203,ko05230,map00010,map00230,map00620,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map04930,map05165,map05203,map05230 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Belongs to the pyruvate kinase family
PMDBBNKE_01079 8.69e-230 pfkA 2.7.1.11 - F ko:K00850 ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04152,ko05230,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04152,map05230 ko00000,ko00001,ko00002,ko01000,ko01009,ko03019 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
PMDBBNKE_01080 0.0 dnaE 2.7.7.7 - L ko:K02337 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase
PMDBBNKE_01081 2.02e-39 - - - S - - - Protein of unknown function (DUF2929)
PMDBBNKE_01082 0.0 clpB - - O ko:K03695 ko04213,map04213 ko00000,ko00001,ko03110 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
PMDBBNKE_01083 3.17e-299 pepT 3.4.11.4 - E ko:K01258 - ko00000,ko01000,ko01002 Cleaves the N-terminal amino acid of tripeptides
PMDBBNKE_01084 3.25e-251 yqfO - - S - - - Belongs to the GTP cyclohydrolase I type 2 NIF3 family
PMDBBNKE_01085 8.34e-165 trmK 2.1.1.217 - S ko:K06967 - ko00000,ko01000,ko03016 SAM-dependent methyltransferase
PMDBBNKE_01086 1.75e-295 - - - M - - - O-Antigen ligase
PMDBBNKE_01087 8.81e-166 drrB - - U ko:K01992 - ko00000,ko00002,ko02000 ABC-2 type transporter
PMDBBNKE_01088 2.08e-213 drrA - - V ko:K01990 - ko00000,ko00002,ko02000 ABC transporter
PMDBBNKE_01089 2.74e-112 - - - K - - - helix_turn_helix multiple antibiotic resistance protein
PMDBBNKE_01090 0.0 pps 2.7.9.2 - H ko:K01007 ko00620,ko00680,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate
PMDBBNKE_01091 2.65e-81 - - - P - - - Rhodanese Homology Domain
PMDBBNKE_01092 7.43e-119 yetL - - K - - - helix_turn_helix multiple antibiotic resistance protein
PMDBBNKE_01093 1.93e-266 - - - - - - - -
PMDBBNKE_01094 5.21e-278 - - - I - - - transferase activity, transferring acyl groups other than amino-acyl groups
PMDBBNKE_01095 1.51e-232 - - - C - - - Zinc-binding dehydrogenase
PMDBBNKE_01096 0.0 - - - P - - - Cation transporter/ATPase, N-terminus
PMDBBNKE_01097 2.2e-310 eno 4.2.1.11 - G ko:K01689 ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066 ko00000,ko00001,ko00002,ko01000,ko03019,ko04147 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
PMDBBNKE_01098 2.66e-306 - - - U ko:K18926 - ko00000,ko00002,ko02000 Major Facilitator Superfamily
PMDBBNKE_01099 4.38e-102 - - - K - - - Transcriptional regulator
PMDBBNKE_01100 7.87e-266 dapE 3.5.1.18 - E ko:K01439 ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230 ko00000,ko00001,ko00002,ko01000 succinyl-diaminopimelate desuccinylase
PMDBBNKE_01101 0.0 nox - - P - - - Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
PMDBBNKE_01102 1.68e-176 - - - K ko:K22103 - ko00000,ko03000 DeoR C terminal sensor domain
PMDBBNKE_01103 1.25e-140 yjhB 3.6.1.13 - F ko:K01515 ko00230,map00230 ko00000,ko00001,ko01000 NUDIX domain
PMDBBNKE_01104 2.65e-93 spx2 - - P ko:K16509 - ko00000 ArsC family
PMDBBNKE_01105 1.56e-90 - - - S - - - Protein of unknown function (DUF1722)
PMDBBNKE_01106 4.88e-147 - - - GM - - - epimerase
PMDBBNKE_01107 0.0 - - - S - - - Zinc finger, swim domain protein
PMDBBNKE_01108 5.04e-155 - 3.1.3.18 - S ko:K01091 ko00630,ko01100,ko01110,ko01130,map00630,map01100,map01110,map01130 ko00000,ko00001,ko01000 haloacid dehalogenase-like hydrolase
PMDBBNKE_01109 2.31e-132 thgA3 2.3.1.18, 2.3.1.79 - S ko:K00633,ko:K00661 - ko00000,ko01000 Maltose O-acetyltransferase
PMDBBNKE_01110 2.49e-167 - - - K - - - Helix-turn-helix domain, rpiR family
PMDBBNKE_01111 6.46e-207 - - - S - - - Alpha beta hydrolase
PMDBBNKE_01112 5.89e-145 - - - GM - - - NmrA-like family
PMDBBNKE_01113 9.69e-99 - - - S - - - Uncharacterized protein conserved in bacteria (DUF2255)
PMDBBNKE_01114 3.86e-205 - - - K - - - Transcriptional regulator
PMDBBNKE_01115 1.04e-218 cryZ 1.1.1.1 - C ko:K00001 ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220 ko00000,ko00001,ko01000 nadph quinone reductase
PMDBBNKE_01116 1.58e-21 - - - S - - - Alpha beta hydrolase
PMDBBNKE_01117 0.0 nox4 - - C - - - Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
PMDBBNKE_01118 9.11e-134 desR - - K ko:K02479,ko:K07693 ko02020,map02020 ko00000,ko00001,ko00002,ko02022 helix_turn_helix, Lux Regulon
PMDBBNKE_01119 7.78e-261 desK 2.7.13.3 - T ko:K07778 ko02020,map02020 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Histidine kinase
PMDBBNKE_01120 7.05e-172 XK27_09830 - - V ko:K01992 - ko00000,ko00002,ko02000 ABC-2 type transporter
PMDBBNKE_01121 3.43e-203 yvfR - - V ko:K01990 - ko00000,ko00002,ko02000 ABC transporter
PMDBBNKE_01123 6.64e-109 - - - K ko:K03827 - ko00000,ko01000 Acetyltransferase (GNAT) domain
PMDBBNKE_01124 9.55e-95 - - - K - - - MarR family
PMDBBNKE_01125 1.49e-147 - - - S - - - Psort location CytoplasmicMembrane, score
PMDBBNKE_01126 4.36e-208 - - - V ko:K01990 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
PMDBBNKE_01127 2.11e-170 - - - S ko:K01992 - ko00000,ko00002,ko02000 ABC-2 family transporter protein
PMDBBNKE_01128 5.21e-254 - - - - - - - -
PMDBBNKE_01129 2.59e-256 - - - - - - - -
PMDBBNKE_01130 2.45e-213 - - - V ko:K01990 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
PMDBBNKE_01131 1.18e-85 ytrA - - K ko:K07979 - ko00000,ko03000 helix_turn_helix gluconate operon transcriptional repressor
PMDBBNKE_01132 1.74e-251 sigA - - K ko:K03086 - ko00000,ko03021 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
PMDBBNKE_01133 0.0 dnaG - - L ko:K02316 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
PMDBBNKE_01134 0.0 glyS 6.1.1.14 - J ko:K01879 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Glycyl-tRNA synthetase beta subunit
PMDBBNKE_01135 8.64e-224 glyQ 6.1.1.14 - J ko:K01878 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 glycyl-tRNA synthetase alpha subunit
PMDBBNKE_01136 4.71e-188 recO - - L ko:K03584 ko03440,map03440 ko00000,ko00001,ko03400 Involved in DNA repair and RecF pathway recombination
PMDBBNKE_01137 4.58e-216 era - - S ko:K03595 - ko00000,ko03009,ko03029 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
PMDBBNKE_01138 1.15e-94 dgkA 2.7.1.107, 2.7.1.66 - M ko:K00887,ko:K00901 ko00550,ko00561,ko00564,ko01100,ko01110,ko04070,ko04072,ko05231,map00550,map00561,map00564,map01100,map01110,map04070,map04072,map05231 ko00000,ko00001,ko01000 Diacylglycerol kinase
PMDBBNKE_01139 7.7e-110 ybeY - - S ko:K07042 - ko00000,ko03009 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
PMDBBNKE_01140 4.81e-229 phoH - - T ko:K06217 - ko00000 phosphate starvation-inducible protein PhoH
PMDBBNKE_01141 9.21e-94 yqeY - - S ko:K09117 - ko00000 YqeY-like protein
PMDBBNKE_01142 1.09e-30 rpsU - - J ko:K02970 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bS21 family
PMDBBNKE_01143 2.32e-194 yqfL 2.7.11.33, 2.7.4.28 - F ko:K09773 - ko00000,ko01000 Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
PMDBBNKE_01144 3.65e-166 - - - C - - - Enoyl-(Acyl carrier protein) reductase
PMDBBNKE_01145 7.36e-220 nfo 3.1.21.2 - L ko:K01151 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
PMDBBNKE_01146 5.49e-286 tagB 2.7.8.44 - M ko:K21285 - ko00000,ko01000 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
PMDBBNKE_01147 4.35e-204 yitT - - S - - - Uncharacterised 5xTM membrane BCR, YitT family COG1284
PMDBBNKE_01148 2.61e-132 msrA 1.8.4.11, 1.8.4.12 - O ko:K07304,ko:K12267 - ko00000,ko01000 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PMDBBNKE_01149 0.0 aspS 6.1.1.12 - J ko:K01876 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
PMDBBNKE_01150 2.47e-310 hisS 6.1.1.21 - J ko:K01892 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 histidyl-tRNA synthetase
PMDBBNKE_01151 2.83e-200 lytH 3.5.1.28 - M ko:K01448 ko01503,map01503 ko00000,ko00001,ko00002,ko01000,ko01011,ko03036 N-acetylmuramoyl-L-alanine amidase
PMDBBNKE_01152 3.23e-214 - - - G - - - Fructosamine kinase
PMDBBNKE_01153 5.97e-151 yjcF - - J - - - HAD-hyrolase-like
PMDBBNKE_01154 8.2e-102 dtd - - J ko:K07560 - ko00000,ko01000,ko03016 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
PMDBBNKE_01155 0.0 relA 2.7.6.5 - KT ko:K00951 ko00230,map00230 ko00000,ko00001,ko01000 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
PMDBBNKE_01156 2.56e-76 - - - - - - - -
PMDBBNKE_01157 3.13e-172 rsmE 2.1.1.193 - J ko:K09761 - ko00000,ko01000,ko03009 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
PMDBBNKE_01158 2.04e-226 prmA - - J ko:K02687 - ko00000,ko01000,ko03009 Ribosomal protein L11 methyltransferase
PMDBBNKE_01159 1.11e-147 yxlJ 3.2.2.21 - L ko:K03652 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 Belongs to the DNA glycosylase MPG family
PMDBBNKE_01160 4.78e-65 - - - - - - - -
PMDBBNKE_01161 1.73e-67 - - - - - - - -
PMDBBNKE_01162 0.0 lepA - - M ko:K03596 ko05134,map05134 ko00000,ko00001 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
PMDBBNKE_01163 1.68e-312 dltD - - M ko:K03740 ko01503,ko02020,ko05150,map01503,map02020,map05150 ko00000,ko00001,ko00002,ko01504 Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
PMDBBNKE_01164 5.75e-47 dltC 6.1.1.13 - J ko:K14188 ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150 ko00000,ko00001,ko00002,ko01000,ko01504 Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PMDBBNKE_01165 1.14e-297 dltB - - M ko:K03739 ko01503,ko02020,ko05150,map01503,map02020,map05150 ko00000,ko00001,ko00002,ko01504 MBOAT, membrane-bound O-acyltransferase family
PMDBBNKE_01166 0.0 dltA 6.1.1.13 - H ko:K03367 ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150 ko00000,ko00001,ko00002,ko01000,ko01504 Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PMDBBNKE_01167 8.59e-27 dltX - - S - - - D-Ala-teichoic acid biosynthesis protein
PMDBBNKE_01168 2e-264 pbpX2 - - V - - - Beta-lactamase
PMDBBNKE_01169 2.54e-266 dnaJ - - O ko:K03686 - ko00000,ko03029,ko03110 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
PMDBBNKE_01170 0.0 dnaK - - O ko:K04043 ko03018,ko04212,ko05152,map03018,map04212,map05152 ko00000,ko00001,ko03019,ko03029,ko03110,ko04147 Heat shock 70 kDa protein
PMDBBNKE_01171 4.94e-115 grpE - - O ko:K03687 - ko00000,ko03029,ko03110 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
PMDBBNKE_01172 4.42e-248 hrcA - - K ko:K03705 - ko00000,ko03000 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
PMDBBNKE_01173 1.19e-169 budA 4.1.1.5 - Q ko:K01575 ko00650,ko00660,map00650,map00660 ko00000,ko00001,ko01000 Alpha-acetolactate decarboxylase
PMDBBNKE_01174 7.56e-242 ribF 2.7.1.26, 2.7.7.2 - H ko:K11753 ko00740,ko01100,ko01110,map00740,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Belongs to the ribF family
PMDBBNKE_01175 6.29e-221 truB 5.4.99.25 - J ko:K03177,ko:K03483 - ko00000,ko01000,ko03000,ko03016 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
PMDBBNKE_01176 1.45e-114 aroK 2.7.1.71 - F ko:K00891 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
PMDBBNKE_01177 8.88e-248 tyrA 1.3.1.12 - E ko:K04517 ko00400,ko00401,ko01100,ko01110,ko01130,ko01230,map00400,map00401,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 prephenate dehydrogenase
PMDBBNKE_01178 8.18e-303 aroA 2.5.1.19 - E ko:K00800 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
PMDBBNKE_01179 1.63e-121 - - - - - - - -
PMDBBNKE_01180 9.01e-276 aroC 4.2.3.5 - E ko:K01736 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
PMDBBNKE_01181 0.0 - - - G - - - Major Facilitator
PMDBBNKE_01182 3.04e-71 rbfA - - J ko:K02834 - ko00000,ko03009 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
PMDBBNKE_01183 0.0 infB - - J ko:K02519 - ko00000,ko03012,ko03029 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
PMDBBNKE_01184 5.46e-62 ylxQ - - J - - - ribosomal protein
PMDBBNKE_01185 2.95e-65 ylxR - - K ko:K07742 - ko00000 Protein of unknown function (DUF448)
PMDBBNKE_01186 4.46e-275 nusA - - K ko:K02600 - ko00000,ko03009,ko03021 Participates in both transcription termination and antitermination
PMDBBNKE_01187 9.74e-108 rimP - - J ko:K09748 - ko00000,ko03009 Required for maturation of 30S ribosomal subunits
PMDBBNKE_01188 0.0 polC 2.7.7.7 - L ko:K03763 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PMDBBNKE_01189 0.0 proS 6.1.1.15 - J ko:K01881 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
PMDBBNKE_01190 4.64e-294 rseP - - M ko:K11749 ko02024,ko04112,map02024,map04112 ko00000,ko00001,ko01000,ko01002 zinc metalloprotease
PMDBBNKE_01191 1.13e-175 cdsA 2.7.7.41 - I ko:K00981 ko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070 ko00000,ko00001,ko00002,ko01000 Belongs to the CDS family
PMDBBNKE_01192 3.17e-190 uppS 2.5.1.31 - H ko:K00806 ko00900,ko01110,map00900,map01110 ko00000,ko00001,ko01000,ko01006 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
PMDBBNKE_01193 9.83e-113 frr - - J ko:K02838 - ko00000,ko03012 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
PMDBBNKE_01194 3.01e-165 pyrH 2.7.4.22 - F ko:K09903 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko01000 Catalyzes the reversible phosphorylation of UMP to UDP
PMDBBNKE_01195 1.88e-194 tsf - - J ko:K02357 - ko00000,ko03012,ko03029 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
PMDBBNKE_01196 6.33e-185 rpsB - - J ko:K02967 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the universal ribosomal protein uS2 family
PMDBBNKE_01197 2.92e-172 - - - S ko:K07025 - ko00000 Haloacid dehalogenase-like hydrolase
PMDBBNKE_01198 1.92e-239 ldhD 1.1.1.28 - CH ko:K03778 ko00620,ko01120,map00620,map01120 ko00000,ko00001,ko01000 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PMDBBNKE_01199 1.02e-66 yazA - - L ko:K07461 - ko00000 GIY-YIG catalytic domain protein
PMDBBNKE_01200 1.14e-175 yabB 2.1.1.223 - L ko:K07461,ko:K15460 - ko00000,ko01000,ko03016 Methyltransferase small domain
PMDBBNKE_01201 8.8e-155 plsC 2.3.1.51 - I ko:K00655 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko01004 Acyltransferase
PMDBBNKE_01202 3.96e-44 XK26_06720 - - S ko:K09976 - ko00000 Uncharacterised protein family (UPF0154)
PMDBBNKE_01203 7.68e-48 ynzC - - S - - - UPF0291 protein
PMDBBNKE_01204 7.22e-149 lexA 3.4.21.88 - K ko:K01356 - ko00000,ko00002,ko01000,ko01002,ko03400 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
PMDBBNKE_01205 7.8e-123 - - - - - - - -
PMDBBNKE_01206 6.35e-276 mvaS 2.3.3.10 - I ko:K01641 ko00072,ko00280,ko00650,ko00900,ko01100,ko01110,ko01130,map00072,map00280,map00650,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Hydroxymethylglutaryl-CoA synthase
PMDBBNKE_01207 1.01e-100 - - - - - - - -
PMDBBNKE_01208 3.81e-87 - - - - - - - -
PMDBBNKE_01209 2.3e-226 csbB - GT2 M ko:K20534 - ko00000,ko01000,ko01005,ko02000 Glycosyltransferase like family 2
PMDBBNKE_01210 8.9e-131 - - - L - - - Helix-turn-helix domain
PMDBBNKE_01211 1.89e-282 ywtF_2 - - K - - - Cell envelope-related transcriptional attenuator domain
PMDBBNKE_01212 3.82e-184 - - - P ko:K02049 - ko00000,ko00002,ko02000 ATPases associated with a variety of cellular activities
PMDBBNKE_01213 0.0 - - - P ko:K02050 - ko00000,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
PMDBBNKE_01214 8.37e-51 - - - P ko:K02050 - ko00000,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
PMDBBNKE_01215 2.38e-294 rodA - - D ko:K05837 - ko00000,ko03036 Cell cycle protein
PMDBBNKE_01217 2.74e-43 - 3.6.1.13 - F ko:K01515 ko00230,map00230 ko00000,ko00001,ko01000 Hydrolase, nudix family
PMDBBNKE_01218 2.41e-05 - - - L ko:K07483 - ko00000 transposase activity
PMDBBNKE_01219 1.75e-43 - - - - - - - -
PMDBBNKE_01220 1.02e-183 - - - Q - - - Methyltransferase
PMDBBNKE_01221 2.84e-75 ybjQ - - S - - - Belongs to the UPF0145 family
PMDBBNKE_01222 2.87e-270 - - - EGP - - - Major facilitator Superfamily
PMDBBNKE_01223 4.57e-135 - - - K - - - Helix-turn-helix domain
PMDBBNKE_01224 1.52e-120 apt 2.4.2.7 - F ko:K00759 ko00230,ko01100,map00230,map01100 ko00000,ko00001,ko01000,ko04147 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
PMDBBNKE_01225 0.0 recJ - - L ko:K07462 ko03410,ko03430,ko03440,map03410,map03430,map03440 ko00000,ko00001,ko01000,ko03400 Single-stranded-DNA-specific exonuclease RecJ
PMDBBNKE_01226 1.84e-67 - - - S - - - Lipopolysaccharide assembly protein A domain
PMDBBNKE_01227 7.93e-177 - - - S ko:K07124 - ko00000 Belongs to the short-chain dehydrogenases reductases (SDR) family
PMDBBNKE_01228 2.05e-228 rnz 3.1.26.11 - J ko:K00784 ko03013,map03013 ko00000,ko00001,ko01000,ko03016 Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
PMDBBNKE_01229 6.62e-62 - - - - - - - -
PMDBBNKE_01230 1.55e-311 obg - - S ko:K03979 - ko00000,ko01000,ko03009 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
PMDBBNKE_01231 3.02e-175 fruR - - K ko:K03436 - ko00000,ko03000 DeoR C terminal sensor domain
PMDBBNKE_01232 4.24e-218 pfkB 2.7.1.56 - H ko:K00882 ko00051,map00051 ko00000,ko00001,ko01000 Belongs to the carbohydrate kinase PfkB family. LacC subfamily
PMDBBNKE_01233 0.0 fruA 2.7.1.202 - GT ko:K02768,ko:K02769,ko:K02770 ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 Phosphotransferase System
PMDBBNKE_01234 0.0 - 3.1.4.53 - S ko:K03651 ko00230,ko02025,map00230,map02025 ko00000,ko00001,ko01000 Calcineurin-like phosphoesterase
PMDBBNKE_01235 0.0 cps4J - - S - - - MatE
PMDBBNKE_01236 4.82e-228 cps4I - - M - - - Glycosyltransferase like family 2
PMDBBNKE_01237 2.32e-298 - - - - - - - -
PMDBBNKE_01238 1.94e-244 cps4G - - M - - - Glycosyltransferase Family 4
PMDBBNKE_01239 1.4e-259 cps4F - - M - - - Glycosyl transferases group 1
PMDBBNKE_01240 2.33e-164 tuaA - - M - - - Bacterial sugar transferase
PMDBBNKE_01241 8.71e-231 cps4D 5.1.3.2, 5.1.3.25 - M ko:K01784,ko:K17947 ko00052,ko00520,ko00523,ko01100,ko01130,map00052,map00520,map00523,map01100,map01130 ko00000,ko00001,ko00002,ko01000 RmlD substrate binding domain
PMDBBNKE_01242 5.54e-189 ywqE 3.1.3.48 - GM ko:K01104 - ko00000,ko01000 PHP domain protein
PMDBBNKE_01243 4.97e-157 ywqD - - D - - - Capsular exopolysaccharide family
PMDBBNKE_01244 4.89e-161 epsB - - M - - - biosynthesis protein
PMDBBNKE_01245 0.0 uvrC - - L ko:K03703 ko03420,map03420 ko00000,ko00001,ko03400 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
PMDBBNKE_01246 3.97e-173 glnQ 3.6.3.21 - E ko:K02028 - ko00000,ko00002,ko01000,ko02000 ABC transporter, ATP-binding protein
PMDBBNKE_01247 0.0 glnPH2 - - P ko:K02029,ko:K02030 - ko00000,ko00002,ko02000 ABC transporter permease
PMDBBNKE_01248 5.12e-31 - - - - - - - -
PMDBBNKE_01249 6.47e-95 - - - S - - - Iron-sulphur cluster biosynthesis
PMDBBNKE_01250 1.3e-65 - - - S - - - mazG nucleotide pyrophosphohydrolase
PMDBBNKE_01251 9.6e-143 engB - - D ko:K03978 - ko00000,ko03036 Necessary for normal cell division and for the maintenance of normal septation
PMDBBNKE_01252 7.8e-300 clpX - - O ko:K03544 ko04112,map04112 ko00000,ko00001,ko03110 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
PMDBBNKE_01253 6.48e-288 tig - - D ko:K03545 - ko00000 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
PMDBBNKE_01254 4.38e-286 tuf - - J ko:K02358,ko:K15771 ko02010,map02010 ko00000,ko00001,ko00002,ko02000,ko03012,ko03029,ko04147 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
PMDBBNKE_01255 3.4e-203 - - - S - - - Tetratricopeptide repeat
PMDBBNKE_01256 0.0 rnjB - - J ko:K12574 ko03018,map03018 ko00000,ko00001,ko01000,ko03019 An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PMDBBNKE_01257 1.29e-200 dapA 4.3.3.7 - E ko:K01714 ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
PMDBBNKE_01258 3.02e-259 - - - EGP - - - Major Facilitator Superfamily
PMDBBNKE_01259 2.9e-56 rpsO - - J ko:K02956 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
PMDBBNKE_01260 1.18e-46 rpsT - - J ko:K02968 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds directly to 16S ribosomal RNA
PMDBBNKE_01261 5.09e-241 holA 2.7.7.7 - L ko:K02340 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase III delta subunit
PMDBBNKE_01262 0.0 comEC - - S ko:K02238 - ko00000,ko00002,ko02044 Competence protein ComEC
PMDBBNKE_01263 7.1e-116 comEB 3.5.4.12 - F ko:K01493 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000,ko02044 ComE operon protein 2
PMDBBNKE_01264 2.56e-162 comEA - - L ko:K02237 - ko00000,ko00002,ko02044 Competence protein ComEA
PMDBBNKE_01265 1.05e-251 lon - - T ko:K07177 ko02024,map02024 ko00000,ko00001,ko01002 Belongs to the peptidase S16 family
PMDBBNKE_01266 2.99e-109 coaD 2.7.7.3 - H ko:K00954 ko00770,ko01100,map00770,map01100 ko00000,ko00001,ko00002,ko01000 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
PMDBBNKE_01267 9.66e-129 rsmD 2.1.1.171 - L ko:K08316 - ko00000,ko01000,ko03009 RNA methyltransferase, RsmD family
PMDBBNKE_01268 1.91e-66 ylbG - - S - - - Uncharacterized protein conserved in bacteria (DUF2129)
PMDBBNKE_01269 0.0 pyc 6.4.1.1 - C ko:K01958 ko00020,ko00620,ko00720,ko01100,ko01120,ko01200,ko01230,map00020,map00620,map00720,map01100,map01120,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
PMDBBNKE_01270 2.51e-261 ftsW - - D ko:K03588 ko04112,map04112 ko00000,ko00001,ko02000,ko03036 Belongs to the SEDS family
PMDBBNKE_01271 0.0 - - - - - - - -
PMDBBNKE_01272 0.0 icaA - - M - - - Glycosyl transferase family group 2
PMDBBNKE_01273 9.51e-135 - - - - - - - -
PMDBBNKE_01274 9.43e-259 - - - - - - - -
PMDBBNKE_01275 0.0 typA - - T ko:K06207 - ko00000 GTP-binding protein TypA
PMDBBNKE_01276 1.23e-177 suhB 3.1.3.25 - G ko:K01092 ko00521,ko00562,ko01100,ko04070,map00521,map00562,map01100,map04070 ko00000,ko00001,ko00002,ko01000 Belongs to the inositol monophosphatase superfamily
PMDBBNKE_01277 2.64e-62 yktA - - S - - - Belongs to the UPF0223 family
PMDBBNKE_01278 2.15e-209 - 1.1.1.27 - C ko:K00016 ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922 ko00000,ko00001,ko01000,ko04147 L-malate dehydrogenase activity
PMDBBNKE_01279 0.0 pdhD 1.8.1.4 - C ko:K00382 ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200 br01601,ko00000,ko00001,ko00002,ko01000,ko04147 Dehydrogenase
PMDBBNKE_01280 2.36e-285 pdhC 2.3.1.12 - C ko:K00627 ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200 br01601,ko00000,ko00001,ko00002,ko01000 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
PMDBBNKE_01281 6.35e-230 pdhB 1.2.4.1 - C ko:K00162 ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04922,ko05230,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200,map04066,map04922,map05230 br01601,ko00000,ko00001,ko00002,ko01000 Transketolase, C-terminal domain protein
PMDBBNKE_01282 4.94e-268 pdhA 1.2.4.1 - C ko:K00161 ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04922,ko05230,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200,map04066,map04922,map05230 br01601,ko00000,ko00001,ko00002,ko01000 Dehydrogenase E1 component
PMDBBNKE_01283 1.61e-131 def 3.5.1.88 - J ko:K01462 - ko00000,ko01000 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
PMDBBNKE_01284 6.45e-111 - - - - - - - -
PMDBBNKE_01285 4.86e-45 ykzG - - S - - - Belongs to the UPF0356 family
PMDBBNKE_01286 0.0 rnjA - - J ko:K12574 ko03018,map03018 ko00000,ko00001,ko01000,ko03019 An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PMDBBNKE_01287 5.96e-241 ytlR - - I - - - Diacylglycerol kinase catalytic domain
PMDBBNKE_01288 2.16e-39 - - - - - - - -
PMDBBNKE_01289 2.28e-169 - - - M ko:K21471 - ko00000,ko01000,ko01002,ko01011 NlpC P60 family protein
PMDBBNKE_01290 5.35e-220 prs2 2.7.6.1 - F ko:K00948 ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PMDBBNKE_01291 0.0 recD2 3.1.11.5 - L ko:K03581 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
PMDBBNKE_01292 5.87e-155 - - - S - - - repeat protein
PMDBBNKE_01293 2.41e-157 pgm6 - - G - - - phosphoglycerate mutase
PMDBBNKE_01294 0.0 - - - N - - - domain, Protein
PMDBBNKE_01295 1.22e-248 - - - S - - - Bacterial protein of unknown function (DUF916)
PMDBBNKE_01296 4.17e-153 - - - N - - - WxL domain surface cell wall-binding
PMDBBNKE_01297 4.64e-150 ktrA - - P ko:K03499 - ko00000,ko02000 domain protein
PMDBBNKE_01298 9.64e-307 ktrB - - P ko:K03498 - ko00000,ko02000 Potassium uptake protein
PMDBBNKE_01299 3.19e-285 mnmA 2.8.1.13 - J ko:K00566 ko04122,map04122 ko00000,ko00001,ko01000,ko03016 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
PMDBBNKE_01300 4.94e-75 XK27_04120 - - S - - - Putative amino acid metabolism
PMDBBNKE_01301 3.69e-278 iscS 2.8.1.7 - E ko:K04487 ko00730,ko01100,ko04122,map00730,map01100,map04122 ko00000,ko00001,ko01000,ko02048,ko03016,ko03029 Aminotransferase class V
PMDBBNKE_01302 5.85e-158 mtnN 3.2.2.9 - E ko:K01243 ko00270,ko01100,ko01230,map00270,map01100,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
PMDBBNKE_01303 7.74e-47 - - - - - - - -
PMDBBNKE_01304 3.51e-125 nudF 3.6.1.13 - L ko:K01515 ko00230,map00230 ko00000,ko00001,ko01000 ADP-ribose pyrophosphatase
PMDBBNKE_01305 5.74e-241 dapF 5.1.1.7 - E ko:K01778 ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
PMDBBNKE_01306 2.05e-20 - - - S - - - Protein of unknown function (DUF3021)
PMDBBNKE_01307 2.57e-47 - - - K - - - LytTr DNA-binding domain
PMDBBNKE_01308 1.47e-100 - - - U ko:K11051 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC-2 type transporter
PMDBBNKE_01309 3.64e-101 cylA - - V ko:K11050 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 abc transporter atp-binding protein
PMDBBNKE_01310 0.0 ileS 6.1.1.5 - J ko:K01870 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
PMDBBNKE_01311 6.52e-124 divIVA - - D ko:K04074 - ko00000,ko03036 DivIVA domain protein
PMDBBNKE_01312 2.06e-187 ylmH - - S - - - S4 domain protein
PMDBBNKE_01313 6.45e-49 ylmG - - S ko:K02221 - ko00000,ko02044 YGGT family
PMDBBNKE_01314 1.56e-93 sepF - - D ko:K09772 - ko00000,ko03036 Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
PMDBBNKE_01315 9.39e-295 ftsZ - - D ko:K03531 ko04112,map04112 ko00000,ko00001,ko02048,ko03036,ko04812 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
PMDBBNKE_01316 3.55e-312 ftsA - - D ko:K03590 ko04112,map04112 ko00000,ko00001,ko03036,ko04812 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
PMDBBNKE_01317 2.34e-208 divIB - - D ko:K03589 ko04112,map04112 ko00000,ko00001,ko03036 Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
PMDBBNKE_01318 5e-253 murG 2.4.1.227 GT28 M ko:K02563 ko00550,ko01100,ko01502,ko04112,map00550,map01100,map01502,map04112 ko00000,ko00001,ko01000,ko01011 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
PMDBBNKE_01319 0.0 murD 6.3.2.9 - M ko:K01925 ko00471,ko00550,ko01100,map00471,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
PMDBBNKE_01320 2.81e-231 mraY 2.7.8.13 - M ko:K01000 ko00550,ko01100,ko01502,map00550,map01100,map01502 ko00000,ko00001,ko01000,ko01011 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
PMDBBNKE_01321 0.0 pbpX - - M ko:K08724,ko:K12552,ko:K12556 ko00550,ko01100,ko01501,map00550,map01100,map01501 ko00000,ko00001,ko01000,ko01011 Penicillin-binding Protein
PMDBBNKE_01322 7.01e-76 ftsL - - D - - - Cell division protein FtsL
PMDBBNKE_01323 2.12e-225 rsmH 2.1.1.199 - J ko:K03438 - ko00000,ko01000,ko03009 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
PMDBBNKE_01324 1.35e-100 mraZ - - K ko:K03925 - ko00000 Belongs to the MraZ family
PMDBBNKE_01325 3.22e-82 - - - S - - - Protein of unknown function (DUF3397)
PMDBBNKE_01326 4.1e-223 - - - P ko:K03284 - ko00000,ko02000 CorA-like Mg2+ transporter protein
PMDBBNKE_01327 2.03e-07 - - - L ko:K07487 - ko00000 Transposase
PMDBBNKE_01328 0.0 ftsK - - D ko:K03466 - ko00000,ko03036 Belongs to the FtsK SpoIIIE SftA family
PMDBBNKE_01329 1.66e-122 cspR 2.1.1.207 - J ko:K03216 - ko00000,ko01000,ko03016 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
PMDBBNKE_01330 1.44e-146 - - - S ko:K07118 - ko00000 NAD(P)H-binding
PMDBBNKE_01331 2.17e-302 brnQ - - U ko:K03311 - ko00000 Component of the transport system for branched-chain amino acids
PMDBBNKE_01333 1.12e-207 rrmA 2.1.1.187 - H ko:K00563,ko:K10947 - ko00000,ko01000,ko03000,ko03009 Methyltransferase
PMDBBNKE_01334 4.82e-55 rpsN - - J ko:K02954 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PMDBBNKE_01335 2.24e-262 XK27_05220 - - S - - - AI-2E family transporter
PMDBBNKE_01336 2.68e-75 srlB 2.7.1.198 - G ko:K02781 ko00051,ko02060,map00051,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system glucitol/sorbitol-specific IIA component
PMDBBNKE_01337 5.57e-247 pgl 3.1.1.31 - G ko:K07404 ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Lactonase, 7-bladed beta-propeller
PMDBBNKE_01338 2.51e-150 cutC - - P ko:K06201 - ko00000 Participates in the control of copper homeostasis
PMDBBNKE_01339 1.09e-222 yjbO 5.4.99.23 - G ko:K06180 - ko00000,ko01000,ko03009 Responsible for synthesis of pseudouridine from uracil
PMDBBNKE_01340 1.29e-193 nadK 2.7.1.23 - F ko:K00858 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko01000 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
PMDBBNKE_01341 9.08e-157 yjbM 2.7.6.5 - S ko:K07816 ko00230,map00230 ko00000,ko00001,ko01000 RelA SpoT domain protein
PMDBBNKE_01342 2.24e-148 yjbH - - Q - - - Thioredoxin
PMDBBNKE_01343 0.0 pepF - - E ko:K08602 - ko00000,ko01000,ko01002 oligoendopeptidase F
PMDBBNKE_01344 2.34e-266 coiA - - S ko:K06198 - ko00000 Competence protein
PMDBBNKE_01345 7.12e-170 mecA - - NOT ko:K16511 - ko00000 Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
PMDBBNKE_01346 9.28e-89 spxA - - K ko:K16509 - ko00000 Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
PMDBBNKE_01347 3.28e-177 yhfI - - S - - - Metallo-beta-lactamase superfamily
PMDBBNKE_01348 1.08e-117 traP 1.14.99.57 - S ko:K21481 - ko00000,ko01000 enzyme involved in biosynthesis of extracellular polysaccharides
PMDBBNKE_01368 1.11e-84 - - - - - - - -
PMDBBNKE_01369 2e-98 yugI - - J ko:K07570,ko:K07571 - ko00000 general stress protein
PMDBBNKE_01370 5.16e-141 ppiB 5.2.1.8 - G ko:K03768 - ko00000,ko01000,ko03110 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
PMDBBNKE_01371 7.18e-153 dedA - - S ko:K03975 - ko00000 SNARE-like domain protein
PMDBBNKE_01372 3.86e-150 - - - S - - - Protein of unknown function (DUF1461)
PMDBBNKE_01373 7.18e-189 nagD 3.1.3.41 - G ko:K01101 ko00627,ko01120,map00627,map01120 ko00000,ko00001,ko01000 Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
PMDBBNKE_01374 6.53e-115 yutD - - S - - - Protein of unknown function (DUF1027)
PMDBBNKE_01375 0.0 yunD 3.1.3.5 - F ko:K01081 ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110 ko00000,ko00001,ko01000 Belongs to the 5'-nucleotidase family
PMDBBNKE_01376 4.75e-150 - - - S - - - Calcineurin-like phosphoesterase
PMDBBNKE_01377 0.0 cycA - - E ko:K03293,ko:K11737 - ko00000,ko02000 Amino acid permease
PMDBBNKE_01378 4.7e-282 ackA 2.7.2.1 - F ko:K00925 ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PMDBBNKE_01379 1.56e-236 ytxK 2.1.1.72 - L ko:K00571 - ko00000,ko01000,ko02048 N-6 DNA Methylase
PMDBBNKE_01381 6.46e-113 - - - S - - - Prokaryotic N-terminal methylation motif
PMDBBNKE_01382 3.03e-27 - - - - ko:K02671 - ko00000,ko02035,ko02044 -
PMDBBNKE_01383 1.5e-108 - - - NU ko:K02246 - ko00000,ko00002,ko02044 general secretion pathway protein
PMDBBNKE_01384 1.97e-72 comGC - - U ko:K02245 - ko00000,ko00002,ko02044 competence protein ComGC
PMDBBNKE_01385 6.2e-242 comGB - - NU ko:K02244 - ko00000,ko00002,ko02044 type II secretion system
PMDBBNKE_01386 6.3e-225 comGA - - NU ko:K02243 - ko00000,ko00002,ko02044 Type II IV secretion system protein
PMDBBNKE_01387 2.06e-205 rbsK 2.7.1.15 - H ko:K00852 ko00030,map00030 ko00000,ko00001,ko01000 Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PMDBBNKE_01388 2.21e-168 yebC - - K - - - Transcriptional regulatory protein
PMDBBNKE_01389 2.44e-65 - - - S ko:K09004 - ko00000 DsrE/DsrF-like family
PMDBBNKE_01390 7.88e-211 - - - G - - - Xylose isomerase domain protein TIM barrel
PMDBBNKE_01391 5.44e-232 ccpA - - K ko:K02529 - ko00000,ko03000 catabolite control protein A
PMDBBNKE_01392 1.55e-275 pepQ 3.4.13.9 - E ko:K01271 - ko00000,ko01000,ko01002 Creatinase/Prolidase N-terminal domain
PMDBBNKE_01393 9.11e-106 - - - K - - - helix_turn_helix, mercury resistance
PMDBBNKE_01394 1.6e-96 - - - - - - - -
PMDBBNKE_01395 1.88e-75 ytxG - - S - - - protein containing a divergent version of the methyl-accepting chemotaxis-like domain
PMDBBNKE_01396 2.31e-202 ykuT - - M ko:K16052,ko:K22044 - ko00000,ko02000 mechanosensitive ion channel
PMDBBNKE_01397 4.54e-287 hipO 3.5.1.47 - E ko:K05823 ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000,ko01002 Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
PMDBBNKE_01398 2.29e-112 dapH 2.3.1.117, 2.3.1.89 - E ko:K00674,ko:K05822 ko00300,ko01100,ko01110,ko01120,ko01230,map00300,map01100,map01110,map01120,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
PMDBBNKE_01399 7.94e-114 ykuL - - S - - - (CBS) domain
PMDBBNKE_01400 4.53e-122 ysnB - - S ko:K07095 - ko00000 Phosphoesterase
PMDBBNKE_01401 8.49e-144 rdgB 3.6.1.66 - F ko:K02428 ko00230,map00230 ko00000,ko00001,ko01000 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
PMDBBNKE_01402 5.06e-194 murI 3.6.1.66, 5.1.1.3 - M ko:K01776,ko:K02428 ko00230,ko00471,ko01100,map00230,map00471,map01100 ko00000,ko00001,ko01000,ko01011 Provides the (R)-glutamate required for cell wall biosynthesis
PMDBBNKE_01403 1.45e-161 yslB - - S - - - Protein of unknown function (DUF2507)
PMDBBNKE_01404 3e-69 trxA - - O ko:K03671 ko04621,ko05418,map04621,map05418 ko00000,ko00001,ko03110 Belongs to the thioredoxin family
PMDBBNKE_01405 0.0 mutS2 - - L ko:K07456 ko03430,map03430 ko00000,ko00001,ko03400 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
PMDBBNKE_01406 1.06e-49 - - - D ko:K09888 - ko00000,ko03036 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
PMDBBNKE_01407 1.31e-63 yrzB - - S - - - Belongs to the UPF0473 family
PMDBBNKE_01408 5.39e-96 yrrK - - J ko:K07447 - ko00000,ko01000 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
PMDBBNKE_01409 5e-57 yrzL - - S - - - Belongs to the UPF0297 family
PMDBBNKE_01410 0.0 alaS 6.1.1.7 - J ko:K01872 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
PMDBBNKE_01411 2.79e-316 cshB 3.6.4.13 - JKL ko:K05592,ko:K18692 ko03018,map03018 ko00000,ko00001,ko01000,ko03009,ko03019 DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
PMDBBNKE_01412 8.32e-227 nrnA 3.1.13.3, 3.1.3.7 - S ko:K06881 ko00920,ko01100,ko01120,map00920,map01100,map01120 ko00000,ko00001,ko01000,ko03400 DHHA1 domain protein
PMDBBNKE_01413 2.48e-276 dinB 2.7.7.7 - L ko:K02346 - ko00000,ko01000,ko03400 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
PMDBBNKE_01414 1.32e-63 yajC - - U ko:K03210 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Preprotein translocase
PMDBBNKE_01415 9.91e-289 tgt 2.4.2.29 - F ko:K00773 - ko00000,ko01000,ko03016 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
PMDBBNKE_01416 5.87e-256 queA 2.4.99.17 - J ko:K07568 - ko00000,ko01000,ko03016 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
PMDBBNKE_01417 2.62e-239 ruvB 3.6.4.12 - L ko:K03551 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
PMDBBNKE_01418 2.83e-138 ruvA 3.6.4.12 - L ko:K03550 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
PMDBBNKE_01419 2.07e-118 - - - - - - - -
PMDBBNKE_01420 0.0 yfhO - - S - - - Bacterial membrane protein YfhO
PMDBBNKE_01421 1.35e-93 - - - - - - - -
PMDBBNKE_01422 0.0 mutL - - L ko:K03572 ko03430,map03430 ko00000,ko00001,ko03400 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
PMDBBNKE_01423 0.0 mutS - - L ko:K03555 ko03430,map03430 ko00000,ko00001,ko03400 that it carries out the mismatch recognition step. This protein has a weak ATPase activity
PMDBBNKE_01424 6.18e-197 ymdB - - S ko:K02029,ko:K02030,ko:K09769 - ko00000,ko00002,ko02000 YmdB-like protein
PMDBBNKE_01425 6.57e-291 rny - - S ko:K18682 ko03018,map03018 ko00000,ko00001,ko01000,ko03019 Endoribonuclease that initiates mRNA decay
PMDBBNKE_01426 2.43e-264 recA - - L ko:K03553 ko03440,map03440 ko00000,ko00001,ko00002,ko03400 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
PMDBBNKE_01427 4.47e-294 cinA 3.5.1.42 - S ko:K03742,ko:K03743 ko00760,map00760 ko00000,ko00001,ko01000 Belongs to the CinA family
PMDBBNKE_01428 1.92e-127 pgsA 2.7.8.5 - I ko:K00995 ko00564,ko01100,map00564,map01100 ko00000,ko00001,ko01000 Belongs to the CDP-alcohol phosphatidyltransferase class-I family
PMDBBNKE_01429 5.74e-172 ymfM - - S ko:K15539 - ko00000 Helix-turn-helix domain
PMDBBNKE_01430 0.0 ymfH - - S - - - Peptidase M16
PMDBBNKE_01431 8.72e-297 ymfF - - S - - - Peptidase M16 inactive domain protein
PMDBBNKE_01432 0.0 lysC 2.7.2.4 - E ko:K00928 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the aspartokinase family
PMDBBNKE_01433 2.61e-199 aatB - - ET ko:K02030 - ko00000,ko00002,ko02000 ABC transporter substrate-binding protein
PMDBBNKE_01434 3.17e-149 glnQ 3.6.3.21 - E ko:K02028 - ko00000,ko00002,ko01000,ko02000 ABC transporter, ATP-binding protein
PMDBBNKE_01435 1.89e-141 yecS_2 - - P ko:K02029,ko:K02030 - ko00000,ko00002,ko02000 ABC transporter permease
PMDBBNKE_01436 1.23e-187 minD - - D ko:K03609 - ko00000,ko03036,ko04812 Belongs to the ParA family
PMDBBNKE_01437 5.41e-150 minC - - D ko:K03610 - ko00000,ko03036,ko04812 Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization
PMDBBNKE_01438 9.47e-115 mreD - - M ko:K03571 - ko00000,ko03036 rod shape-determining protein MreD
PMDBBNKE_01439 3.76e-184 mreC - - M ko:K03570 - ko00000,ko03036 Involved in formation and maintenance of cell shape
PMDBBNKE_01440 1.74e-211 mreB - - D ko:K03569 - ko00000,ko02048,ko03036,ko04812 cell shape determining protein MreB
PMDBBNKE_01441 1.15e-150 radC - - L ko:K03630 - ko00000 DNA repair protein
PMDBBNKE_01442 9.36e-317 folC 6.3.2.12, 6.3.2.17 - H ko:K11754 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the folylpolyglutamate synthase family
PMDBBNKE_01443 0.0 valS 6.1.1.9 - J ko:K01873 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
PMDBBNKE_01444 3.56e-116 tpx 1.11.1.15 - O ko:K11065 - ko00000,ko01000 Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
PMDBBNKE_01445 4.31e-297 gshF 6.3.2.2 - H ko:K01919,ko:K16786,ko:K16787 ko00270,ko00480,ko01100,ko02010,map00270,map00480,map01100,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 Belongs to the glutamate--cysteine ligase type 1 family
PMDBBNKE_01446 7.66e-292 thiI 2.8.1.4 - H ko:K03151 ko00730,ko01100,ko04122,map00730,map01100,map04122 ko00000,ko00001,ko01000,ko03016 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
PMDBBNKE_01447 2.22e-278 iscS2 2.8.1.7 - E ko:K04487 ko00730,ko01100,ko04122,map00730,map01100,map04122 ko00000,ko00001,ko01000,ko02048,ko03016,ko03029 Aminotransferase class V
PMDBBNKE_01448 0.0 ezrA - - D ko:K06286 - ko00000,ko03036 modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
PMDBBNKE_01449 5.28e-105 yebR 1.8.4.14 - T ko:K08968 ko00270,map00270 ko00000,ko00001,ko01000 GAF domain-containing protein
PMDBBNKE_01450 2.15e-137 rpsD - - J ko:K02986 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
PMDBBNKE_01451 1.64e-144 yktB - - S - - - Belongs to the UPF0637 family
PMDBBNKE_01452 4e-105 XK27_05190 - - S - - - Protein of unknown function (DUF1694)
PMDBBNKE_01453 1.57e-142 - - - S - - - Protein of unknown function (DUF1648)
PMDBBNKE_01454 4.54e-59 - - - K - - - helix_turn_helix, Arsenical Resistance Operon Repressor
PMDBBNKE_01455 7.24e-291 malL 3.2.1.10 GH13 G ko:K01182 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 COG0366 Glycosidases
PMDBBNKE_01456 3.43e-55 - 2.7.1.191 - G ko:K02793 ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system fructose IIA component
PMDBBNKE_01457 5.82e-139 - - - G ko:K02796 ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060 ko00000,ko00001,ko00002,ko02000 PTS system mannose fructose sorbose family IID component
PMDBBNKE_01458 4.54e-132 - - - G ko:K02795 ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060 ko00000,ko00001,ko00002,ko02000 PTS system sorbose-specific iic component
PMDBBNKE_01459 3.79e-85 - 2.7.1.191 - G ko:K02794 ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system sorbose subfamily IIB component
PMDBBNKE_01460 1.31e-119 - - - K - - - Periplasmic binding proteins and sugar binding domain of LacI family
PMDBBNKE_01461 0.0 gshAB 6.3.2.2 - H ko:K01919 ko00270,ko00480,ko01100,map00270,map00480,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the glutamate--cysteine ligase type 1 family
PMDBBNKE_01462 2.96e-302 rarA - - L ko:K07478 - ko00000 recombination factor protein RarA
PMDBBNKE_01463 1.34e-52 - - - - - - - -
PMDBBNKE_01464 2.37e-107 uspA - - T - - - universal stress protein
PMDBBNKE_01465 1.91e-259 bla2 3.5.2.6 - V ko:K17836 ko00311,ko01130,ko01501,map00311,map01130,map01501 ko00000,ko00001,ko00002,ko01000,ko01504 Beta-lactamase enzyme family
PMDBBNKE_01466 4.7e-207 - - - K - - - Helix-turn-helix XRE-family like proteins
PMDBBNKE_01467 0.0 glpQ3 3.1.4.46 - C ko:K01126 ko00564,map00564 ko00000,ko00001,ko01000 Glycerophosphoryl diester phosphodiesterase family
PMDBBNKE_01468 6.54e-273 ddl 6.3.2.4 - F ko:K01921 ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502 ko00000,ko00001,ko01000,ko01011 Belongs to the D-alanine--D-alanine ligase family
PMDBBNKE_01469 7.55e-242 - 1.1.1.1, 1.6.5.5 - C ko:K00001,ko:K00344 ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220 ko00000,ko00001,ko01000 Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily
PMDBBNKE_01470 1.88e-226 - - - S - - - Protein of unknown function (DUF2785)
PMDBBNKE_01471 3.34e-215 hicD3 1.1.1.27 - C ko:K00016 ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922 ko00000,ko00001,ko01000,ko04147 Belongs to the LDH MDH superfamily
PMDBBNKE_01472 1.23e-190 metQ - - M ko:K02072,ko:K02073 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Belongs to the nlpA lipoprotein family
PMDBBNKE_01473 2.1e-151 metI - - U ko:K02069,ko:K02072 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter permease
PMDBBNKE_01474 2.24e-239 metN - - P ko:K02071 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
PMDBBNKE_01475 3.2e-64 gcsH2 - - E ko:K02437 ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200 ko00000,ko00001,ko00002 glycine cleavage
PMDBBNKE_01476 2.15e-280 rodA - - D ko:K05837 - ko00000,ko03036 Belongs to the SEDS family
PMDBBNKE_01477 2.54e-46 - - - S - - - Protein of unknown function (DUF2969)
PMDBBNKE_01478 1.52e-57 ytjA - - S ko:K08998 - ko00000 Could be involved in insertion of integral membrane proteins into the membrane
PMDBBNKE_01479 1.44e-230 mbl - - D ko:K03569 - ko00000,ko02048,ko03036,ko04812 Cell shape determining protein MreB Mrl
PMDBBNKE_01480 1.68e-132 - - - J ko:K03817 - ko00000,ko01000,ko03009 Acetyltransferase (GNAT) domain
PMDBBNKE_01481 2.94e-315 murA 2.5.1.7 - M ko:K00790 ko00520,ko00550,ko01100,map00520,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PMDBBNKE_01482 5.95e-74 atpC - - C ko:K02114 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 Produces ATP from ADP in the presence of a proton gradient across the membrane
PMDBBNKE_01483 0.0 atpD 3.6.3.14 - C ko:K02112 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194,ko01000 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
PMDBBNKE_01484 9.14e-213 atpG - - C ko:K02115 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
PMDBBNKE_01485 0.0 atpA 3.6.3.14 - C ko:K02111 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194,ko01000 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
PMDBBNKE_01486 2.03e-118 atpH - - C ko:K02113 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PMDBBNKE_01487 5.41e-77 atpF - - C ko:K02109 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
PMDBBNKE_01488 1.81e-37 atpE - - C ko:K02110 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PMDBBNKE_01489 4.82e-165 atpB - - C ko:K02108 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194,ko03110 it plays a direct role in the translocation of protons across the membrane
PMDBBNKE_01490 2.49e-294 pyrP - - F ko:K02824 - ko00000,ko02000 Permease
PMDBBNKE_01491 7.81e-148 upp 2.4.2.9 - F ko:K00761 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko01000 Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
PMDBBNKE_01492 2.49e-296 glyA 2.1.2.1 - E ko:K00600 ko00260,ko00460,ko00630,ko00670,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko01523,map00260,map00460,map00630,map00670,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map01523 ko00000,ko00001,ko00002,ko01000 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
PMDBBNKE_01493 4.39e-244 ywlC 2.7.7.87 - J ko:K07566 - ko00000,ko01000,ko03009,ko03016 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
PMDBBNKE_01494 5.96e-205 prmC 2.1.1.297 - J ko:K02493 - ko00000,ko01000,ko03012 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
PMDBBNKE_01495 1.88e-251 prfA - - J ko:K02835 - ko00000,ko03012 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
PMDBBNKE_01496 1.54e-141 tdk 2.7.1.21 - F ko:K00857 ko00240,ko00983,ko01100,map00240,map00983,map01100 ko00000,ko00001,ko01000 thymidine kinase
PMDBBNKE_01497 0.0 murE2 6.3.2.13 - M ko:K01928 ko00300,ko00550,map00300,map00550 ko00000,ko00001,ko01000,ko01011 Domain of unknown function (DUF1727)
PMDBBNKE_01498 1.83e-175 cobQ - - S ko:K07009 - ko00000 glutamine amidotransferase
PMDBBNKE_01499 4.95e-250 manA 5.3.1.8 - G ko:K01809 ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 mannose-6-phosphate isomerase
PMDBBNKE_01500 1.12e-246 ampC - - V - - - Beta-lactamase
PMDBBNKE_01501 8.57e-41 - - - - - - - -
PMDBBNKE_01502 1.9e-260 ilvE 2.6.1.42 - E ko:K00826 ko00270,ko00280,ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00270,map00280,map00290,map00770,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Branched-chain amino acid aminotransferase
PMDBBNKE_01503 1.33e-77 - - - - - - - -
PMDBBNKE_01504 5.37e-182 - - - - - - - -
PMDBBNKE_01505 0.0 yfiC - - V ko:K06147 - ko00000,ko02000 ABC transporter
PMDBBNKE_01506 0.0 ycfI - - V ko:K06147 - ko00000,ko02000 ABC transporter, ATP-binding protein
PMDBBNKE_01507 1.81e-85 yxeA - - S - - - Protein of unknown function (DUF1093)
PMDBBNKE_01508 2.96e-182 icaB - - G - - - Polysaccharide deacetylase
PMDBBNKE_01511 2.89e-100 - - - - - - - -
PMDBBNKE_01512 1.54e-62 - - - S - - - Bacteriophage holin
PMDBBNKE_01513 3.09e-62 - - - - - - - -
PMDBBNKE_01514 2.15e-262 lysA2 - - M ko:K07273 - ko00000 Glycosyl hydrolases family 25
PMDBBNKE_01516 6.19e-93 - - - S - - - Protein of unknown function (DUF1617)
PMDBBNKE_01517 0.0 - - - LM - - - DNA recombination
PMDBBNKE_01518 2.29e-81 - - - - - - - -
PMDBBNKE_01519 0.0 - - - D - - - domain protein
PMDBBNKE_01520 1.42e-83 - - - - - - - -
PMDBBNKE_01521 1.75e-100 - - - S - - - Phage tail tube protein, TTP
PMDBBNKE_01522 4.96e-72 - - - - - - - -
PMDBBNKE_01523 7.59e-115 - - - - - - - -
PMDBBNKE_01524 9.63e-68 - - - - - - - -
PMDBBNKE_01525 5.01e-69 - - - - - - - -
PMDBBNKE_01527 2.08e-222 - - - S - - - Phage major capsid protein E
PMDBBNKE_01528 1.4e-66 - - - - - - - -
PMDBBNKE_01531 3.05e-41 - - - - - - - -
PMDBBNKE_01532 0.0 - - - S - - - Phage Mu protein F like protein
PMDBBNKE_01533 4.98e-51 - - - J ko:K07584 - ko00000 Cysteine protease Prp
PMDBBNKE_01534 0.0 - - - S - - - Phage portal protein, SPP1 Gp6-like
PMDBBNKE_01535 1.78e-305 - - - S - - - Terminase-like family
PMDBBNKE_01536 5.06e-84 - - - L ko:K07474 - ko00000 Terminase small subunit
PMDBBNKE_01537 7.31e-19 - - - - - - - -
PMDBBNKE_01539 1.35e-25 - - - S - - - KTSC domain
PMDBBNKE_01542 3.86e-107 - - - S - - - Phage transcriptional regulator, ArpU family
PMDBBNKE_01543 7.37e-08 - - - - - - - -
PMDBBNKE_01544 5.7e-87 - - - L - - - Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC
PMDBBNKE_01545 1.58e-81 - - - - - - - -
PMDBBNKE_01546 6.14e-122 - - - - - - - -
PMDBBNKE_01547 2.2e-65 - - - - - - - -
PMDBBNKE_01548 2.43e-196 - - - L - - - DnaD domain protein
PMDBBNKE_01549 2.33e-174 pi112 - - L - - - PDDEXK-like domain of unknown function (DUF3799)
PMDBBNKE_01550 4.31e-198 - - - L ko:K07455 - ko00000,ko03400 RecT family
PMDBBNKE_01551 1.44e-90 - - - - - - - -
PMDBBNKE_01553 7.2e-109 - - - - - - - -
PMDBBNKE_01554 4.47e-70 - - - - - - - -
PMDBBNKE_01557 1.13e-36 - - - K - - - Cro/C1-type HTH DNA-binding domain
PMDBBNKE_01558 8.29e-51 - - - K ko:K07729 - ko00000,ko03000 sequence-specific DNA binding
PMDBBNKE_01561 4.44e-27 - - - S - - - protein disulfide oxidoreductase activity
PMDBBNKE_01563 1.63e-19 - - - S ko:K15051 - ko00000 DNA/RNA non-specific endonuclease
PMDBBNKE_01567 3.86e-17 - - - M - - - LysM domain
PMDBBNKE_01572 2.78e-48 - - - S - - - Domain of unknown function DUF1829
PMDBBNKE_01573 9.38e-279 int3 - - L - - - Belongs to the 'phage' integrase family
PMDBBNKE_01575 1.98e-40 - - - - - - - -
PMDBBNKE_01577 1.28e-51 - - - - - - - -
PMDBBNKE_01578 9.28e-58 - - - - - - - -
PMDBBNKE_01579 1.27e-109 - - - K - - - MarR family
PMDBBNKE_01580 0.0 - - - D - - - nuclear chromosome segregation
PMDBBNKE_01581 0.0 inlJ - - M - - - MucBP domain
PMDBBNKE_01582 6.58e-24 - - - - - - - -
PMDBBNKE_01583 3.26e-24 - - - - - - - -
PMDBBNKE_01584 3.67e-18 - - - - - - - -
PMDBBNKE_01585 1.07e-26 - - - - - - - -
PMDBBNKE_01586 9.35e-24 - - - - - - - -
PMDBBNKE_01587 9.35e-24 - - - - - - - -
PMDBBNKE_01588 2.16e-26 - - - - - - - -
PMDBBNKE_01589 4.63e-24 - - - - - - - -
PMDBBNKE_01590 0.0 - 3.6.3.44 - P ko:K18104 ko01501,ko02010,map01501,map02010 ko00000,ko00001,ko00002,ko01000,ko01504,ko02000 ABC transporter transmembrane region
PMDBBNKE_01591 0.0 - 2.4.1.52 GT4 M ko:K00712 - ko00000,ko01000,ko01003 Glycosyl transferases group 1
PMDBBNKE_01592 0.0 - - - V ko:K02003,ko:K02004 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
PMDBBNKE_01593 2.1e-33 - - - - - - - -
PMDBBNKE_01594 0.0 pgi 5.3.1.9 - G ko:K01810 ko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the GPI family
PMDBBNKE_01595 2.51e-200 glcU - - U ko:K05340 - ko00000,ko02000 sugar transport
PMDBBNKE_01596 5.23e-277 ywbD 2.1.1.191 - J ko:K06969 - ko00000,ko01000,ko03009 S-adenosylmethionine-dependent methyltransferase
PMDBBNKE_01597 0.0 yclK - - T - - - Histidine kinase
PMDBBNKE_01598 1.45e-173 yclJ - - K ko:K02483 - ko00000,ko02022 response regulator
PMDBBNKE_01599 2.12e-308 XK27_08635 - - S ko:K09157 - ko00000 UPF0210 protein
PMDBBNKE_01600 1.06e-51 XK27_08630 - - T ko:K07166 - ko00000 Belongs to the UPF0237 family
PMDBBNKE_01601 1.26e-218 - - - EG - - - EamA-like transporter family
PMDBBNKE_01603 6.24e-120 - - - S - - - ECF-type riboflavin transporter, S component
PMDBBNKE_01604 1.31e-64 - - - - - - - -
PMDBBNKE_01605 6.83e-274 yceI - - EGP ko:K08369 - ko00000,ko02000 Major Facilitator
PMDBBNKE_01606 8.05e-178 - - - F - - - NUDIX domain
PMDBBNKE_01607 2.68e-32 - - - - - - - -
PMDBBNKE_01609 8.16e-207 - - - S - - - Alpha/beta hydrolase of unknown function (DUF915)
PMDBBNKE_01610 4.27e-223 ykfC 3.4.14.13 - M ko:K20742 - ko00000,ko01000,ko01002 NlpC/P60 family
PMDBBNKE_01611 4.17e-107 - - - K ko:K03719 - ko00000,ko03000,ko03036 AsnC family
PMDBBNKE_01612 2.29e-48 - - - - - - - -
PMDBBNKE_01613 1.11e-45 - - - - - - - -
PMDBBNKE_01614 4.86e-279 - - - T - - - diguanylate cyclase
PMDBBNKE_01615 0.0 - - - S - - - ABC transporter, ATP-binding protein
PMDBBNKE_01616 9.24e-140 - - - K ko:K06977 - ko00000 acetyltransferase
PMDBBNKE_01617 9.95e-108 - - - E - - - Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PMDBBNKE_01623 1.71e-35 - - - - - - - -
PMDBBNKE_01625 7.9e-229 - - - S ko:K06904 - ko00000 Phage capsid family
PMDBBNKE_01626 5.23e-145 - - - S - - - Phage portal protein
PMDBBNKE_01628 3.96e-159 terL - - S - - - overlaps another CDS with the same product name
PMDBBNKE_01629 9.2e-62 - - - - - - - -
PMDBBNKE_01630 0.0 nagE 2.7.1.193, 2.7.1.199, 2.7.1.208 - G ko:K02777,ko:K02802,ko:K02803,ko:K02804,ko:K20107,ko:K20108,ko:K20116,ko:K20117,ko:K20118 ko00010,ko00500,ko00520,ko02026,ko02060,ko05111,map00010,map00500,map00520,map02026,map02060,map05111 ko00000,ko00001,ko00002,ko01000,ko02000 phosphotransferase system, EIIB
PMDBBNKE_01631 3.39e-178 panE1 1.1.1.169 - H ko:K00077 ko00770,ko01100,ko01110,map00770,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
PMDBBNKE_01632 3.15e-52 panE1 1.1.1.169 - H ko:K00077 ko00770,ko01100,ko01110,map00770,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
PMDBBNKE_01633 3.45e-209 - - - S - - - Uncharacterised protein, DegV family COG1307
PMDBBNKE_01634 8.69e-295 hom 1.1.1.3 - E ko:K00003 ko00260,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00270,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Homoserine dehydrogenase
PMDBBNKE_01635 6.08e-312 metY 2.5.1.49 - E ko:K01740 ko00270,ko01100,map00270,map01100 ko00000,ko00001,ko01000 Catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol
PMDBBNKE_01636 1.26e-212 metAA 2.3.1.46 - E ko:K00651 ko00270,ko00920,ko01100,ko01110,ko01230,map00270,map00920,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Transfers an acetyl group from acetyl-CoA to
PMDBBNKE_01637 1.13e-225 ABC-SBP - - S ko:K01989 - ko00000,ko00002,ko02000 ABC transporter
PMDBBNKE_01638 6.03e-196 XK27_08840 - - U ko:K05832 - ko00000,ko00002,ko02000 Belongs to the binding-protein-dependent transport system permease family
PMDBBNKE_01639 1.32e-178 XK27_08845 - - S ko:K05833 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
PMDBBNKE_01640 0.0 npr 1.11.1.1 - C ko:K05910 - ko00000,ko01000 NADH oxidase
PMDBBNKE_01641 2.34e-203 glxR 1.1.1.31 - I ko:K00020 ko00280,ko01100,map00280,map01100 ko00000,ko00001,ko01000 Dehydrogenase
PMDBBNKE_01642 1.01e-176 yceF - - P ko:K05794 - ko00000 membrane
PMDBBNKE_01643 7.09e-125 - 2.3.1.79 - S ko:K00661 - ko00000,ko01000 Maltose acetyltransferase
PMDBBNKE_01644 3.68e-256 hisC 2.6.1.9 - E ko:K00817 ko00340,ko00350,ko00360,ko00400,ko00401,ko00960,ko01100,ko01110,ko01130,ko01230,map00340,map00350,map00360,map00400,map00401,map00960,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
PMDBBNKE_01645 1.07e-68 hisE 3.6.1.31 - E ko:K01523 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 phosphoribosyl-ATP diphosphatase activity
PMDBBNKE_01646 2.49e-77 hisI 3.5.4.19, 3.6.1.31 - E ko:K01496,ko:K11755 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
PMDBBNKE_01647 3e-171 hisF - - E ko:K02500 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
PMDBBNKE_01648 6.84e-166 hisA 5.3.1.16 - E ko:K01814 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
PMDBBNKE_01649 2.23e-142 hisH - - E ko:K02501 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
PMDBBNKE_01650 2.46e-139 hisB 4.2.1.19 - E ko:K01693 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 imidazoleglycerol-phosphate dehydratase
PMDBBNKE_01651 1.92e-299 hisD 1.1.1.23 - E ko:K00013 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
PMDBBNKE_01652 1.69e-151 hisG 2.4.2.17 - F ko:K00765,ko:K02502 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity
PMDBBNKE_01653 1.39e-276 hisZ - - E ko:K02502 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002 Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
PMDBBNKE_01654 7.54e-207 hisK 3.1.3.15 - E ko:K04486 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Histidinol phosphate phosphatase, HisJ
PMDBBNKE_01655 3.72e-283 ysaA - - V - - - RDD family
PMDBBNKE_01656 7.28e-213 corA - - P ko:K03284 - ko00000,ko02000 CorA-like Mg2+ transporter protein
PMDBBNKE_01657 1.71e-67 - - - S - - - Domain of unknown function (DU1801)
PMDBBNKE_01658 2.54e-17 rmeB - - K - - - transcriptional regulator, MerR family
PMDBBNKE_01659 1.69e-255 asd 1.2.1.11 - E ko:K00133 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
PMDBBNKE_01660 1.35e-236 yxeI 3.5.1.24 - M ko:K01442 ko00120,ko00121,ko01100,map00120,map00121,map01100 ko00000,ko00001,ko01000 Linear amide C-N hydrolase, choloylglycine hydrolase family protein
PMDBBNKE_01661 1.45e-46 - - - - - - - -
PMDBBNKE_01662 3.1e-144 - - - S - - - Protein of unknown function (DUF1211)
PMDBBNKE_01663 0.0 ydgH - - S ko:K06994 - ko00000 MMPL family
PMDBBNKE_01664 0.0 - - - M - - - domain protein
PMDBBNKE_01665 3e-98 yjcF - - S - - - Acetyltransferase (GNAT) domain
PMDBBNKE_01666 0.0 ltaS 2.7.8.20 - M ko:K19005 ko00561,ko01100,map00561,map01100 ko00000,ko00001,ko01000 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
PMDBBNKE_01667 0.0 glpQ4 3.1.4.46 - C ko:K01126 ko00564,map00564 ko00000,ko00001,ko01000 phosphodiesterase
PMDBBNKE_01668 4.01e-236 yumC 1.18.1.2, 1.19.1.1 - C ko:K21567 - ko00000,ko01000 Ferredoxin--NADP reductase
PMDBBNKE_01669 2.14e-183 - - - S - - - Alpha/beta hydrolase of unknown function (DUF915)
PMDBBNKE_01670 4.32e-247 - - - S - - - domain, Protein
PMDBBNKE_01671 6.04e-217 - - - S - - - Polyphosphate kinase 2 (PPK2)
PMDBBNKE_01672 2.57e-128 - - - C - - - Nitroreductase family
PMDBBNKE_01673 1.23e-228 iunH1 3.2.2.1 - F ko:K01239 ko00230,ko00760,ko01100,map00230,map00760,map01100 ko00000,ko00001,ko01000 nucleoside hydrolase
PMDBBNKE_01674 2.43e-209 rnhA 3.1.26.4 - L ko:K03469 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PMDBBNKE_01675 1.91e-198 - - - U ko:K05340 - ko00000,ko02000 sugar transport
PMDBBNKE_01676 1.79e-92 - - - GK - - - ROK family
PMDBBNKE_01677 1.13e-112 - - - GK - - - ROK family
PMDBBNKE_01678 2.08e-199 - 1.97.1.4 - C ko:K04069 - ko00000,ko01000 Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PMDBBNKE_01679 1.18e-172 rdrA - - K ko:K22103 - ko00000,ko03000 DeoR C terminal sensor domain
PMDBBNKE_01680 0.0 pflD 2.3.1.54 - C ko:K00656 ko00620,ko00640,ko00650,ko01100,ko01120,map00620,map00640,map00650,map01100,map01120 ko00000,ko00001,ko01000 Pyruvate formate lyase-like
PMDBBNKE_01681 4.3e-228 - - - K - - - sugar-binding domain protein
PMDBBNKE_01682 1.81e-160 mipB 2.2.1.2 - H ko:K00616,ko:K08314 ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Transaldolase/Fructose-6-phosphate aldolase
PMDBBNKE_01683 2.13e-182 - - - S - - - Sucrose-6F-phosphate phosphohydrolase
PMDBBNKE_01684 2.89e-224 ccpB - - K - - - lacI family
PMDBBNKE_01685 1.51e-202 - - - K - - - Helix-turn-helix domain, rpiR family
PMDBBNKE_01686 5e-227 - - - S - - - Oxidoreductase family, NAD-binding Rossmann fold
PMDBBNKE_01687 1.89e-254 yhhX - - S - - - Oxidoreductase family, C-terminal alpha/beta domain
PMDBBNKE_01688 0.0 nhaP2 - - P ko:K03316 - ko00000 Sodium proton antiporter
PMDBBNKE_01689 0.0 dxs 2.2.1.7 - H ko:K01662 ko00730,ko00900,ko01100,ko01110,ko01130,map00730,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
PMDBBNKE_01690 9.38e-139 pncA - - Q - - - Isochorismatase family
PMDBBNKE_01691 2.66e-172 - - - - - - - -
PMDBBNKE_01692 5e-162 skfE - - V ko:K01990 - ko00000,ko00002,ko02000 ABC transporter
PMDBBNKE_01693 8.34e-86 lexA - - K ko:K07979 - ko00000,ko03000 Transcriptional regulator, GntR family
PMDBBNKE_01694 7.2e-61 - - - S - - - Enterocin A Immunity
PMDBBNKE_01695 3.25e-223 ybcH - - D ko:K06889 - ko00000 Alpha beta
PMDBBNKE_01696 0.0 pepF2 - - E - - - Oligopeptidase F
PMDBBNKE_01697 1.4e-95 - - - K - - - Transcriptional regulator
PMDBBNKE_01698 1.86e-210 - - - - - - - -
PMDBBNKE_01699 1.23e-75 - - - - - - - -
PMDBBNKE_01700 1.44e-65 - - - - - - - -
PMDBBNKE_01701 0.0 spxB 1.2.3.3 - EH ko:K00158 ko00620,ko01100,map00620,map01100 ko00000,ko00001,ko01000 Belongs to the TPP enzyme family
PMDBBNKE_01702 4.09e-89 - - - - - - - -
PMDBBNKE_01703 1.19e-186 - - - S ko:K06889 - ko00000 Dienelactone hydrolase family
PMDBBNKE_01704 2.84e-73 ytpP - - CO - - - Thioredoxin
PMDBBNKE_01705 6.69e-263 metB 2.5.1.48 - E ko:K01739 ko00270,ko00450,ko00920,ko01100,ko01110,ko01130,ko01230,map00270,map00450,map00920,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Cys/Met metabolism PLP-dependent enzyme
PMDBBNKE_01706 3.89e-62 - - - - - - - -
PMDBBNKE_01707 1.57e-71 - - - - - - - -
PMDBBNKE_01708 6.94e-106 - - - S - - - Protein of unknown function (DUF2798)
PMDBBNKE_01709 4.05e-98 - - - - - - - -
PMDBBNKE_01710 4.15e-78 - - - - - - - -
PMDBBNKE_01711 4.26e-250 lplA 6.3.1.20 - H ko:K03800 ko00785,ko01100,map00785,map01100 ko00000,ko00001,ko01000 Lipoate-protein ligase
PMDBBNKE_01712 0.0 acm2 3.2.1.17 - NU ko:K01185 - ko00000,ko01000 Bacterial SH3 domain
PMDBBNKE_01713 1.63e-95 - - - G ko:K02744 ko00052,ko02060,map00052,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system fructose IIA component
PMDBBNKE_01714 3.82e-188 agaD - - G ko:K02747,ko:K02796,ko:K10986 ko00051,ko00052,ko00520,ko01100,ko02060,map00051,map00052,map00520,map01100,map02060 ko00000,ko00001,ko00002,ko02000 PTS system mannose/fructose/sorbose family IID component
PMDBBNKE_01715 6.07e-184 - - - G ko:K02746,ko:K10985 ko00052,ko02060,map00052,map02060 ko00000,ko00001,ko00002,ko02000 PTS system sorbose-specific iic component
PMDBBNKE_01716 1.49e-112 - 2.7.1.191 - K ko:K02745,ko:K02794,ko:K10984 ko00051,ko00052,ko00520,ko01100,ko02060,map00051,map00052,map00520,map01100,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system sorbose subfamily IIB component
PMDBBNKE_01717 5.87e-166 - - - K ko:K03710 - ko00000,ko03000 helix_turn_helix gluconate operon transcriptional repressor
PMDBBNKE_01718 2.51e-103 uspA3 - - T - - - universal stress protein
PMDBBNKE_01719 1.84e-205 rluA 5.4.99.23, 5.4.99.28, 5.4.99.29 - J ko:K06177,ko:K06180 - ko00000,ko01000,ko03009,ko03016 Responsible for synthesis of pseudouridine from uracil
PMDBBNKE_01720 4.05e-64 - - - K - - - Cro/C1-type HTH DNA-binding domain
PMDBBNKE_01721 1.38e-30 - - - S - - - Protein of unknown function (DUF2929)
PMDBBNKE_01722 3.07e-284 - - - M - - - Glycosyl transferases group 1
PMDBBNKE_01723 0.0 xfp 4.1.2.22, 4.1.2.9 - G ko:K01621 ko00030,ko00710,ko01100,ko01120,map00030,map00710,map01100,map01120 ko00000,ko00001,ko01000 Phosphoketolase
PMDBBNKE_01724 3.74e-205 - - - S - - - Putative esterase
PMDBBNKE_01725 3.53e-169 - - - K - - - Transcriptional regulator
PMDBBNKE_01726 4.75e-117 ybaK - - S ko:K03976 - ko00000,ko01000,ko03016 Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
PMDBBNKE_01727 1.74e-178 - - - - - - - -
PMDBBNKE_01728 4.85e-151 yagB - - S ko:K06950 - ko00000 Metal dependent phosphohydrolases with conserved 'HD' motif.
PMDBBNKE_01729 8.05e-179 rrp8 - - K - - - LytTr DNA-binding domain
PMDBBNKE_01730 1.7e-118 - - - K - - - Domain of unknown function (DUF1836)
PMDBBNKE_01731 5.4e-80 - - - - - - - -
PMDBBNKE_01732 7.48e-96 hsp2 - - O ko:K13993 ko04141,map04141 ko00000,ko00001,ko03110 Belongs to the small heat shock protein (HSP20) family
PMDBBNKE_01733 2.97e-76 - - - - - - - -
PMDBBNKE_01734 0.0 yhdP - - S - - - Transporter associated domain
PMDBBNKE_01735 1.18e-114 nrdI - - F ko:K03647 - ko00000 Belongs to the NrdI family
PMDBBNKE_01736 0.0 nhaP3 - - P ko:K03316 - ko00000 Sodium proton antiporter
PMDBBNKE_01737 1.17e-270 yttB - - EGP - - - Major Facilitator
PMDBBNKE_01738 4.71e-81 - - - K - - - helix_turn_helix, mercury resistance
PMDBBNKE_01739 8.91e-220 - - - C - - - Zinc-binding dehydrogenase
PMDBBNKE_01740 4.71e-74 - - - S - - - SdpI/YhfL protein family
PMDBBNKE_01741 0.0 zwf 1.1.1.363, 1.1.1.49 - G ko:K00036 ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,ko05230,map00030,map00480,map01100,map01110,map01120,map01130,map01200,map05230 ko00000,ko00001,ko00002,ko01000,ko04147 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
PMDBBNKE_01742 0.0 gabR - - K ko:K00375 - ko00000,ko03000 Bacterial regulatory proteins, gntR family
PMDBBNKE_01743 2.91e-277 araT2 - - E ko:K00841 ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Aminotransferase
PMDBBNKE_01744 1.46e-131 dapA 4.3.3.7 - E ko:K01714 ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
PMDBBNKE_01745 3.59e-26 - - - - - - - -
PMDBBNKE_01746 2.09e-169 - - - S ko:K07090 - ko00000 membrane transporter protein
PMDBBNKE_01747 5.73e-208 mleR - - K - - - LysR family
PMDBBNKE_01748 1.29e-148 - - - GM - - - NAD(P)H-binding
PMDBBNKE_01749 3.86e-124 - - - K - - - Acetyltransferase (GNAT) family
PMDBBNKE_01750 0.0 addA 3.6.4.12 - L ko:K16898 - ko00000,ko01000,ko03400 ATP-dependent helicase nuclease subunit A
PMDBBNKE_01751 0.0 rexB 3.6.4.12 - L ko:K16899 - ko00000,ko01000,ko03400 The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
PMDBBNKE_01752 5.46e-218 oroP - - S ko:K09936 ko02024,map02024 ko00000,ko00001,ko02000 Putative inner membrane exporter, YdcZ
PMDBBNKE_01753 6.64e-146 pyrE 2.4.2.10 - F ko:K00762 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
PMDBBNKE_01754 1.09e-161 pyrF 4.1.1.23 - F ko:K01591 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
PMDBBNKE_01755 4.24e-218 pyrD 1.3.1.14, 1.3.98.1 - F ko:K00226,ko:K17828 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
PMDBBNKE_01756 0.0 carB 6.3.5.5 - F ko:K01955 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Carbamoyl-phosphate synthase
PMDBBNKE_01757 2.36e-272 carA 6.3.5.5 - F ko:K01956 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Carbamoyl-phosphate synthetase glutamine chain
PMDBBNKE_01758 1.95e-309 pyrC 3.5.2.3 - F ko:K01465 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
PMDBBNKE_01759 1.22e-220 pyrB 2.1.3.2 - F ko:K00609 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the ATCase OTCase family
PMDBBNKE_01760 7.13e-123 pyrR 2.4.2.9 - F ko:K02825 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko01000,ko03000 Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
PMDBBNKE_01761 0.0 pucR_2 - - QT ko:K09684 - ko00000,ko03000 Purine catabolism regulatory protein-like family
PMDBBNKE_01762 3.1e-305 pbuX - - F ko:K03458,ko:K16169 - ko00000,ko02000 xanthine permease
PMDBBNKE_01763 5.67e-280 pbuG - - S ko:K06901 - ko00000,ko02000 Permease family
PMDBBNKE_01764 2.24e-206 - - - GM - - - NmrA-like family
PMDBBNKE_01765 1.25e-199 - - - T - - - EAL domain
PMDBBNKE_01766 2.62e-121 - - - - - - - -
PMDBBNKE_01767 0.0 yijG - GT2 M ko:K11936 ko02026,map02026 ko00000,ko00001,ko01000,ko01003,ko02000 Glycosyl transferase
PMDBBNKE_01768 4.17e-163 - - - E - - - Methionine synthase
PMDBBNKE_01769 2.71e-280 purD 6.3.4.13 - F ko:K01945 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Belongs to the GARS family
PMDBBNKE_01770 0.0 purH 2.1.2.3, 3.5.4.10 - F ko:K00602 ko00230,ko00670,ko01100,ko01110,ko01130,ko01523,map00230,map00670,map01100,map01110,map01130,map01523 ko00000,ko00001,ko00002,ko01000,ko04147 Bifunctional purine biosynthesis protein PurH
PMDBBNKE_01771 5.35e-133 purN 2.1.2.2 - F ko:K11175 ko00230,ko00670,ko01100,ko01110,ko01130,map00230,map00670,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
PMDBBNKE_01772 5.35e-246 purM 6.3.3.1 - F ko:K01933 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Phosphoribosylformylglycinamidine cyclo-ligase
PMDBBNKE_01773 0.0 purF 2.4.2.14 - F ko:K00764 ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000,ko01002 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
PMDBBNKE_01774 0.0 purL 6.3.5.3 - F ko:K01952 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PMDBBNKE_01775 1.63e-162 purQ 6.3.5.3 - F ko:K01952 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PMDBBNKE_01776 1.17e-55 purS 6.3.5.3 - F ko:K01952 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PMDBBNKE_01777 3.39e-168 purC 6.3.2.6 - F ko:K01923 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Belongs to the SAICAR synthetase family
PMDBBNKE_01778 1e-270 purK 6.3.4.18 - F ko:K01589 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
PMDBBNKE_01779 3.77e-104 purE 5.4.99.18 - F ko:K01588 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
PMDBBNKE_01780 7.9e-305 XK27_09615 1.5.1.36 - S ko:K19784,ko:K22393 ko00740,ko01100,map00740,map01100 ko00000,ko00001,ko01000 reductase
PMDBBNKE_01781 9.92e-143 - - - S - - - NADPH-dependent FMN reductase
PMDBBNKE_01782 1.65e-242 lplL 6.3.1.20 - H ko:K03800 ko00785,ko01100,map00785,map01100 ko00000,ko00001,ko01000 Bacterial lipoate protein ligase C-terminus
PMDBBNKE_01783 2.04e-189 ptp3 3.1.3.48 - T ko:K01104 - ko00000,ko01000 Tyrosine phosphatase family
PMDBBNKE_01784 5.95e-153 cah 4.2.1.1 - P ko:K01674 ko00910,map00910 ko00000,ko00001,ko01000 Eukaryotic-type carbonic anhydrase
PMDBBNKE_01785 4.15e-191 - - - S - - - Alpha/beta hydrolase of unknown function (DUF915)
PMDBBNKE_01786 3.7e-233 ansB 3.5.1.1 - EJ ko:K01424 ko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110 ko00000,ko00001,ko01000 Asparaginase
PMDBBNKE_01787 2.05e-178 cysA - - V ko:K02003 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
PMDBBNKE_01788 0.0 - - - V ko:K02004 - ko00000,ko00002,ko02000 FtsX-like permease family
PMDBBNKE_01789 4.76e-56 - - - - - - - -
PMDBBNKE_01790 8.2e-81 - - - K - - - Transcriptional regulator, GntR family
PMDBBNKE_01791 7.89e-212 - - - V ko:K01990 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
PMDBBNKE_01792 3.41e-190 - - - - - - - -
PMDBBNKE_01793 2.7e-104 usp5 - - T - - - universal stress protein
PMDBBNKE_01794 1.08e-47 - - - - - - - -
PMDBBNKE_01795 4.02e-95 gtcA - - S - - - Teichoic acid glycosylation protein
PMDBBNKE_01796 1.76e-114 - - - - - - - -
PMDBBNKE_01797 4.87e-66 - - - - - - - -
PMDBBNKE_01798 4.79e-13 - - - - - - - -
PMDBBNKE_01799 5.02e-298 patB 4.4.1.8 - E ko:K14155 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 ko00000,ko00001,ko01000,ko01007 Aminotransferase, class I
PMDBBNKE_01800 1.16e-110 - - - F - - - belongs to the nudix hydrolase family
PMDBBNKE_01801 1.52e-151 - - - - - - - -
PMDBBNKE_01802 1.21e-69 - - - - - - - -
PMDBBNKE_01804 0.0 nplT 3.2.1.133, 3.2.1.135, 3.2.1.54 GH13 G ko:K01208 ko00500,ko01100,map00500,map01100 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 13 family
PMDBBNKE_01805 0.0 thrC 4.2.3.1 - E ko:K01733 ko00260,ko00750,ko01100,ko01110,ko01120,ko01230,map00260,map00750,map01100,map01110,map01120,map01230 ko00000,ko00001,ko00002,ko01000 Threonine synthase
PMDBBNKE_01806 4.65e-186 - - - S - - - Sucrose-6F-phosphate phosphohydrolase
PMDBBNKE_01807 1.67e-40 - - - S - - - Pentapeptide repeats (8 copies)
PMDBBNKE_01808 1.76e-143 - 2.3.1.79 - S ko:K00661 - ko00000,ko01000 Maltose acetyltransferase
PMDBBNKE_01809 2.28e-132 - 3.6.1.13 - L ko:K01515 ko00230,map00230 ko00000,ko00001,ko01000 Belongs to the Nudix hydrolase family
PMDBBNKE_01810 2.26e-91 - - - FG - - - Scavenger mRNA decapping enzyme C-term binding
PMDBBNKE_01811 1.62e-173 fabG 1.1.1.100 - IQ ko:K00059 ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 Enoyl-(Acyl carrier protein) reductase
PMDBBNKE_01812 3.94e-49 XK27_01315 - - S - - - Protein of unknown function (DUF2829)
PMDBBNKE_01813 9.97e-269 ybhE - - S ko:K09963 - ko00000 Bacterial protein of unknown function (DUF871)
PMDBBNKE_01814 4.43e-294 - - - S - - - Sterol carrier protein domain
PMDBBNKE_01815 1.58e-285 - - - EGP - - - Transmembrane secretion effector
PMDBBNKE_01816 3.74e-115 yrxA - - S ko:K07105 - ko00000 3H domain
PMDBBNKE_01817 0.0 nadC2 6.3.4.21 - F ko:K00763 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko01000 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
PMDBBNKE_01818 9.69e-149 - - - K - - - Transcriptional regulator
PMDBBNKE_01819 8.66e-173 - - - V ko:K01990 - ko00000,ko00002,ko02000 AAA domain, putative AbiEii toxin, Type IV TA system
PMDBBNKE_01820 9.82e-111 dps - - P ko:K04047 - ko00000,ko03036 Belongs to the Dps family
PMDBBNKE_01822 9.04e-78 yafQ - - S ko:K19157 - ko00000,ko01000,ko02048 endonuclease activity
PMDBBNKE_01823 1.11e-59 - - - D ko:K19159 - ko00000,ko02048 Antitoxin component of a toxin-antitoxin (TA) module
PMDBBNKE_01824 5.09e-128 - - - L - - - Integrase
PMDBBNKE_01825 3.2e-74 - - - - - - - -
PMDBBNKE_01827 0.0 cadA 3.6.3.3, 3.6.3.5 - P ko:K01534 - ko00000,ko01000 P-type ATPase
PMDBBNKE_01828 4.68e-183 glpF - - U ko:K02440 - ko00000,ko02000 Belongs to the MIP aquaporin (TC 1.A.8) family
PMDBBNKE_01830 1.92e-71 trxA3 - - O ko:K03671 ko04621,ko05418,map04621,map05418 ko00000,ko00001,ko03110 Thioredoxin-like domain
PMDBBNKE_01831 3.27e-53 yrkD - - S - - - Metal-sensitive transcriptional repressor
PMDBBNKE_01832 1.67e-25 - - - - - - - -
PMDBBNKE_01833 1.37e-124 dpsB - - P - - - Belongs to the Dps family
PMDBBNKE_01834 9.47e-43 copZ - - P - - - Heavy-metal-associated domain
PMDBBNKE_01835 4.29e-173 - - - V ko:K01990 - ko00000,ko00002,ko02000 AAA domain, putative AbiEii toxin, Type IV TA system
PMDBBNKE_01836 9.53e-317 dsdA 4.3.1.18 - E ko:K01753 ko00260,map00260 ko00000,ko00001,ko01000 Belongs to the serine threonine dehydratase family. DsdA subfamily
PMDBBNKE_01837 0.0 pbg4 3.2.1.86 GT1 G ko:K01223 ko00010,ko00500,map00010,map00500 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 1 family
PMDBBNKE_01838 0.0 pbg5 3.2.1.86 GT1 G ko:K01223 ko00010,ko00500,map00010,map00500 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 1 family
PMDBBNKE_01839 6.7e-74 celC 2.7.1.196, 2.7.1.205 - G ko:K02759 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system, Lactose Cellobiose specific IIA subunit
PMDBBNKE_01840 1.86e-64 pts20B 2.7.1.196, 2.7.1.205 - G ko:K02760 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system, Lactose/Cellobiose specific IIB subunit
PMDBBNKE_01841 7.44e-168 gntR - - K ko:K03489 - ko00000,ko03000 UTRA
PMDBBNKE_01842 1.4e-181 epsV - - S - - - glycosyl transferase family 2
PMDBBNKE_01843 1.75e-156 pgm7 - - G - - - Phosphoglycerate mutase family
PMDBBNKE_01844 7.63e-107 - - - - - - - -
PMDBBNKE_01845 5.06e-196 - - - S - - - hydrolase
PMDBBNKE_01846 1.51e-235 ykpB 1.1.1.169 - H ko:K00077 ko00770,ko01100,ko01110,map00770,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
PMDBBNKE_01847 9.35e-203 - - - EG - - - EamA-like transporter family
PMDBBNKE_01848 4.12e-226 serA1 - - EH - - - D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
PMDBBNKE_01849 3.78e-132 - 1.5.1.40 - S ko:K06988 - ko00000,ko01000 NADP oxidoreductase coenzyme F420-dependent
PMDBBNKE_01850 0.0 - - - - ko:K21471 - ko00000,ko01000,ko01002,ko01011 -
PMDBBNKE_01851 1.17e-101 fld - - C ko:K03839 - ko00000 Flavodoxin
PMDBBNKE_01852 0.0 - - - M - - - Domain of unknown function (DUF5011)
PMDBBNKE_01853 1.08e-81 - - - M - - - Domain of unknown function (DUF5011)
PMDBBNKE_01854 0.0 - - - M - - - Bacterial surface protein 26-residue PARCEL repeat (3 repeats)
PMDBBNKE_01855 4.3e-44 - - - - - - - -
PMDBBNKE_01856 5.59e-163 aroC1 4.2.1.10 - E ko:K03785 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Type I 3-dehydroquinase
PMDBBNKE_01857 0.0 ycaM - - E - - - amino acid
PMDBBNKE_01858 2e-100 - - - K - - - Winged helix DNA-binding domain
PMDBBNKE_01859 8.21e-212 - 1.1.1.346 - S ko:K06221 - ko00000,ko01000 Oxidoreductase, aldo keto reductase family protein
PMDBBNKE_01860 5.11e-208 akr5f 1.1.1.346 - S ko:K06221 - ko00000,ko01000 reductase
PMDBBNKE_01861 1.3e-209 - - - K - - - Transcriptional regulator
PMDBBNKE_01863 1.97e-110 - - - S - - - Pfam:DUF3816
PMDBBNKE_01864 1.21e-306 tyrS 6.1.1.1 - J ko:K01866 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
PMDBBNKE_01865 1.54e-144 - - - - - - - -
PMDBBNKE_01866 2.52e-242 - - - M ko:K07273 - ko00000 Glycosyl hydrolases family 25
PMDBBNKE_01867 1.57e-184 - - - S - - - Peptidase_C39 like family
PMDBBNKE_01868 1.04e-120 - - - S - - - Protein of unknown function (DUF1694)
PMDBBNKE_01869 3.38e-150 - - - S ko:K07150 - ko00000 Protein of unknown function (DUF554)
PMDBBNKE_01870 9.38e-189 - - - KT - - - helix_turn_helix, mercury resistance
PMDBBNKE_01871 3.41e-295 gltT - - U ko:K03309,ko:K11102 - ko00000,ko02000 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
PMDBBNKE_01872 1.86e-123 - - - S ko:K08996 - ko00000 Protein of unknown function (DUF1440)
PMDBBNKE_01873 1.63e-238 - - - V ko:K02004 - ko00000,ko00002,ko02000 ABC transporter permease
PMDBBNKE_01874 7.14e-157 - - - V ko:K02003 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
PMDBBNKE_01875 1.12e-116 - - - T ko:K16923 - ko00000,ko00002,ko02000 phosphorelay sensor kinase activity
PMDBBNKE_01876 5.72e-238 iunH3 3.2.2.1 - F ko:K01239 ko00230,ko00760,ko01100,map00230,map00760,map01100 ko00000,ko00001,ko01000 Inosine-uridine preferring nucleoside hydrolase
PMDBBNKE_01877 5.04e-127 ywjB - - H - - - RibD C-terminal domain
PMDBBNKE_01878 3.26e-257 napA - - P - - - Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
PMDBBNKE_01879 9.01e-155 - - - S - - - Membrane
PMDBBNKE_01880 2.11e-199 mleP3 - - S ko:K07088 - ko00000 Membrane transport protein
PMDBBNKE_01881 0.0 aspA 4.3.1.1 - E ko:K01744 ko00250,ko01100,map00250,map01100 ko00000,ko00001,ko01000 Fumarase C C-terminus
PMDBBNKE_01882 7.15e-260 - - - EGP - - - Major Facilitator Superfamily
PMDBBNKE_01883 7.22e-163 - 3.8.1.2 - S ko:K01560 ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120 ko00000,ko00001,ko01000 Haloacid dehalogenase-like hydrolase
PMDBBNKE_01884 0.0 ycnB - - U - - - Belongs to the major facilitator superfamily
PMDBBNKE_01885 4.03e-104 - - - S - - - Domain of unknown function (DUF4811)
PMDBBNKE_01886 3.06e-129 ydaF - - J ko:K03817 - ko00000,ko01000,ko03009 Acetyltransferase (GNAT) domain
PMDBBNKE_01887 4.38e-222 - - - S - - - Conserved hypothetical protein 698
PMDBBNKE_01888 2.06e-194 rlrG - - K ko:K21900 - ko00000,ko03000 Transcriptional regulator
PMDBBNKE_01889 0.0 tagE5 2.4.1.52 GT4 M ko:K00712 - ko00000,ko01000,ko01003 Poly(Glycerol-phosphate) alpha-glucosyltransferase
PMDBBNKE_01890 0.0 tagE6 2.4.1.52 GT4 M ko:K00712 - ko00000,ko01000,ko01003 Glycosyl transferases group 1
PMDBBNKE_01891 1.14e-79 - - - M - - - LysM domain protein
PMDBBNKE_01892 2.72e-90 - - - M - - - LysM domain
PMDBBNKE_01893 3.92e-120 adaB 2.1.1.63 - L ko:K00567,ko:K10778,ko:K13531 - ko00000,ko01000,ko03000,ko03400 Methyltransferase
PMDBBNKE_01894 4.23e-215 natA - - S ko:K01990 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
PMDBBNKE_01895 6.76e-270 natB - - CP ko:K01992 - ko00000,ko00002,ko02000 ABC-2 family transporter protein
PMDBBNKE_01896 6.27e-166 - - - S - - - Belongs to the short-chain dehydrogenases reductases (SDR) family
PMDBBNKE_01897 2e-73 cmd 4.1.1.44 - S ko:K01607 ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220 ko00000,ko00001,ko01000 Carboxymuconolactone decarboxylase family
PMDBBNKE_01898 4.77e-100 yphH - - S - - - Cupin domain
PMDBBNKE_01899 1.27e-103 - - - K - - - transcriptional regulator, MerR family
PMDBBNKE_01900 5.3e-302 dapE 3.5.1.18 - E ko:K01439 ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230 ko00000,ko00001,ko00002,ko01000 succinyl-diaminopimelate desuccinylase
PMDBBNKE_01901 0.0 ylbB - - V ko:K02004 - ko00000,ko00002,ko02000 ABC transporter permease
PMDBBNKE_01902 2.03e-155 - - - V ko:K02003 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
PMDBBNKE_01904 2.93e-151 nth 4.2.99.18 - L ko:K10773 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
PMDBBNKE_01905 3.18e-141 thgA3 2.3.1.79 - S ko:K00661 - ko00000,ko01000 Maltose acetyltransferase
PMDBBNKE_01906 1.03e-150 lepB 3.4.21.89 - U ko:K03100 ko02024,ko03060,map02024,map03060 ko00000,ko00001,ko01000,ko01002 Belongs to the peptidase S26 family
PMDBBNKE_01907 2.82e-110 - - - - - - - -
PMDBBNKE_01908 2.09e-110 yvbK - - K - - - GNAT family
PMDBBNKE_01909 2.8e-49 - - - - - - - -
PMDBBNKE_01910 2.81e-64 - - - - - - - -
PMDBBNKE_01911 5.46e-145 pgm8 - - G - - - Histidine phosphatase superfamily (branch 1)
PMDBBNKE_01912 2.65e-78 - - - S - - - Domain of unknown function (DUF4440)
PMDBBNKE_01913 1.57e-202 - - - K - - - LysR substrate binding domain
PMDBBNKE_01914 2.53e-134 - - - GM - - - NAD(P)H-binding
PMDBBNKE_01915 2.03e-248 adh2 1.1.1.1 - E ko:K00001 ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220 ko00000,ko00001,ko01000 alcohol dehydrogenase
PMDBBNKE_01916 2.9e-194 - - - IQ - - - Enoyl-(Acyl carrier protein) reductase
PMDBBNKE_01917 1.15e-179 - 1.1.1.346 - S ko:K06221 - ko00000,ko01000 reductase
PMDBBNKE_01918 2.92e-106 - - - S - - - Protein of unknown function (DUF1211)
PMDBBNKE_01919 2.47e-97 - - - C - - - Flavodoxin
PMDBBNKE_01920 1.38e-160 gdh 1.1.1.47 - IQ ko:K00034 ko00030,ko01120,ko01200,map00030,map01120,map01200 ko00000,ko00001,ko01000 reductase
PMDBBNKE_01921 1.07e-116 - - - U ko:K05340 - ko00000,ko02000 sugar transport
PMDBBNKE_01922 1.83e-111 - - - GM - - - NAD(P)H-binding
PMDBBNKE_01923 7.86e-138 akr5f 1.1.1.346 - S ko:K06221 - ko00000,ko01000 reductase
PMDBBNKE_01924 5.63e-98 - - - K - - - Transcriptional regulator
PMDBBNKE_01926 1.03e-31 - - - C - - - Flavodoxin
PMDBBNKE_01927 1.69e-08 adhR - - K - - - helix_turn_helix, mercury resistance
PMDBBNKE_01928 9.99e-147 - - - S - - - Belongs to the short-chain dehydrogenases reductases (SDR) family
PMDBBNKE_01929 2.41e-165 - - - C - - - Aldo keto reductase
PMDBBNKE_01930 4.02e-181 akr5f 1.1.1.346 - S ko:K06221 - ko00000,ko01000 reductase
PMDBBNKE_01931 3.08e-178 - - - EGP ko:K08166 - ko00000,ko02000 Major Facilitator Superfamily
PMDBBNKE_01932 5.55e-106 - - - GM - - - NAD(P)H-binding
PMDBBNKE_01933 2.1e-99 - - - T - - - Belongs to the universal stress protein A family
PMDBBNKE_01934 1.04e-124 maa 2.3.1.79 - S ko:K00661 - ko00000,ko01000 Maltose O-acetyltransferase
PMDBBNKE_01935 2.4e-160 ysaA 3.1.3.5, 3.8.1.2 - S ko:K01560,ko:K07025,ko:K08723 ko00230,ko00240,ko00361,ko00625,ko00760,ko01100,ko01110,ko01120,map00230,map00240,map00361,map00625,map00760,map01100,map01110,map01120 ko00000,ko00001,ko01000 Haloacid dehalogenase-like hydrolase
PMDBBNKE_01936 1.12e-105 - - - - - - - -
PMDBBNKE_01937 3.73e-131 - 1.5.1.40 - S ko:K06988 - ko00000,ko01000 NADP oxidoreductase coenzyme F420-dependent
PMDBBNKE_01938 3.45e-285 patB 4.4.1.8 - E ko:K14155 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 ko00000,ko00001,ko01000,ko01007 Aminotransferase, class I
PMDBBNKE_01939 1.52e-131 - - - M - - - Protein of unknown function (DUF3737)
PMDBBNKE_01940 4.96e-247 - - - C - - - Aldo/keto reductase family
PMDBBNKE_01942 0.0 mdlB - - V ko:K06147,ko:K18890 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter
PMDBBNKE_01943 0.0 mdlA - - V ko:K06148,ko:K18889 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter
PMDBBNKE_01944 9.09e-314 - - - EGP - - - Major Facilitator
PMDBBNKE_01947 1.24e-229 yhgE - - V ko:K01421 - ko00000 domain protein
PMDBBNKE_01948 1.74e-123 - - - K - - - Transcriptional regulator (TetR family)
PMDBBNKE_01949 6.88e-71 - - - K - - - helix_turn_helix, Arsenical Resistance Operon Repressor
PMDBBNKE_01950 3.34e-199 endA - - F ko:K15051 - ko00000 DNA RNA non-specific endonuclease
PMDBBNKE_01951 1.06e-138 yokL3 - - J - - - Acetyltransferase (GNAT) domain
PMDBBNKE_01952 3.05e-126 - 2.3.1.128 - J ko:K03790 - ko00000,ko01000,ko03009 Acetyltransferase (GNAT) domain
PMDBBNKE_01953 9.53e-284 - - - S ko:K07052 - ko00000 CAAX protease self-immunity
PMDBBNKE_01954 0.0 ykpA - - S - - - ABC transporter, ATP-binding protein
PMDBBNKE_01955 3.16e-188 - 3.1.3.102, 3.1.3.104 - S ko:K20861 ko00740,ko01100,ko01110,map00740,map01100,map01110 ko00000,ko00001,ko00002,ko01000 hydrolase
PMDBBNKE_01956 0.0 - - - S - - - Predicted membrane protein (DUF2207)
PMDBBNKE_01957 0.0 uvrA3 - - L ko:K03701 ko03420,map03420 ko00000,ko00001,ko03400 excinuclease ABC
PMDBBNKE_01958 9.07e-263 - - - EGP - - - Major facilitator Superfamily
PMDBBNKE_01959 2.67e-220 ropB - - K - - - Helix-turn-helix XRE-family like proteins
PMDBBNKE_01960 8.38e-297 yxiO - - S ko:K06902 ko04138,map04138 ko00000,ko00001,ko02000,ko04131 Vacuole effluxer Atg22 like
PMDBBNKE_01961 0.0 npp - - S - - - type I phosphodiesterase nucleotide pyrophosphatase
PMDBBNKE_01962 1.58e-203 - - - I - - - alpha/beta hydrolase fold
PMDBBNKE_01963 3.39e-166 treR - - K ko:K03486 - ko00000,ko03000 UTRA
PMDBBNKE_01964 0.0 - - - - - - - -
PMDBBNKE_01965 2e-52 - - - S - - - Cytochrome B5
PMDBBNKE_01966 5.02e-117 pts21A - - G ko:K02755 ko02060,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
PMDBBNKE_01967 2.05e-279 - - - T - - - Diguanylate cyclase, GGDEF domain
PMDBBNKE_01968 2.82e-163 - - - T - - - Putative diguanylate phosphodiesterase
PMDBBNKE_01969 3.83e-135 nrdG 1.97.1.4 - O ko:K04068 - ko00000,ko01000 Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PMDBBNKE_01970 0.0 nrdD 1.1.98.6 - F ko:K21636 ko00230,ko00240,ko01100,map00230,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Ribonucleoside-triphosphate reductase
PMDBBNKE_01971 1.56e-108 - - - - - - - -
PMDBBNKE_01972 5.97e-96 def2 3.5.1.88 - J ko:K01462 - ko00000,ko01000 Removes the formyl group from the N-terminal Met of newly synthesized proteins
PMDBBNKE_01973 5.32e-242 apbE 2.7.1.180 - H ko:K03734 - ko00000,ko01000 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
PMDBBNKE_01974 2.09e-244 dus - - J - - - Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PMDBBNKE_01975 3.7e-30 - - - - - - - -
PMDBBNKE_01976 1.84e-134 - - - - - - - -
PMDBBNKE_01977 5.12e-212 - - - K - - - LysR substrate binding domain
PMDBBNKE_01978 1.24e-313 - - - P - - - Sodium:sulfate symporter transmembrane region
PMDBBNKE_01979 0.0 - 4.1.1.98 - H ko:K03182 ko00130,ko01100,ko01110,map00130,map01100,map01110 ko00000,ko00001,ko00002,ko01000 3-octaprenyl-4-hydroxybenzoate carboxy-lyase
PMDBBNKE_01980 0.0 tcaA - - S ko:K21463 - ko00000 response to antibiotic
PMDBBNKE_01981 3.22e-181 - - - S - - - zinc-ribbon domain
PMDBBNKE_01983 4.29e-50 - - - - - - - -
PMDBBNKE_01984 1.48e-171 - - - S ko:K06889 - ko00000 Alpha/beta hydrolase family
PMDBBNKE_01985 4.07e-232 - - - S ko:K07035 - ko00000 Phosphotransferase system, EIIC
PMDBBNKE_01986 0.0 - - - I - - - acetylesterase activity
PMDBBNKE_01987 1.99e-297 - - - M - - - Collagen binding domain
PMDBBNKE_01988 6.92e-206 yicL - - EG - - - EamA-like transporter family
PMDBBNKE_01989 3.03e-166 - - - E - - - lipolytic protein G-D-S-L family
PMDBBNKE_01990 1.44e-226 - 4.1.1.52 - S ko:K22213 - ko00000,ko01000 Amidohydrolase
PMDBBNKE_01991 1.98e-142 - - - K - - - Transcriptional regulator C-terminal region
PMDBBNKE_01992 8.76e-63 - - - K - - - HxlR-like helix-turn-helix
PMDBBNKE_01993 8.78e-206 ypbG 2.7.1.2 - GK ko:K00845 ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 ROK family
PMDBBNKE_01994 0.0 lmrA 3.6.3.44 - V ko:K02021,ko:K18104 ko01501,ko02010,map01501,map02010 ko00000,ko00001,ko00002,ko01000,ko01504,ko02000 ABC transporter
PMDBBNKE_01995 6.37e-125 - - - K - - - Transcriptional regulator, MarR family
PMDBBNKE_01996 3.29e-153 ydgI3 - - C - - - Nitroreductase family
PMDBBNKE_01997 0.0 nagE 2.7.1.193, 2.7.1.199, 2.7.1.208 - G ko:K02777,ko:K02802,ko:K02803,ko:K02804,ko:K20107,ko:K20108,ko:K20116,ko:K20117,ko:K20118 ko00010,ko00500,ko00520,ko02026,ko02060,ko05111,map00010,map00500,map00520,map02026,map02060,map05111 ko00000,ko00001,ko00002,ko01000,ko02000 phosphotransferase system, EIIB
PMDBBNKE_01998 7.52e-139 - - - S ko:K05833 - ko00000,ko00002,ko02000 ATPases associated with a variety of cellular activities
PMDBBNKE_01999 4.78e-197 WQ51_06230 - - U ko:K05832 - ko00000,ko00002,ko02000 Belongs to the binding-protein-dependent transport system permease family
PMDBBNKE_02000 7.28e-218 XK27_00670 - - S ko:K01989 - ko00000,ko00002,ko02000 ABC transporter
PMDBBNKE_02001 0.0 - - - - - - - -
PMDBBNKE_02002 1.4e-82 - - - - - - - -
PMDBBNKE_02003 1.52e-239 - - - S - - - Cell surface protein
PMDBBNKE_02004 1.48e-136 - - - S - - - WxL domain surface cell wall-binding
PMDBBNKE_02005 1.91e-124 acuB - - S ko:K04767 - ko00000 Domain in cystathionine beta-synthase and other proteins.
PMDBBNKE_02006 1.61e-157 livF - - E ko:K01996 ko02010,ko02024,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter
PMDBBNKE_02007 1.28e-180 livG - - E ko:K01995 ko02010,ko02024,map02010,map02024 ko00000,ko00001,ko00002,ko02000 Branched-chain amino acid ATP-binding cassette transporter
PMDBBNKE_02008 2.19e-191 livM - - E ko:K01997,ko:K01998 ko02010,ko02024,map02010,map02024 ko00000,ko00001,ko00002,ko02000 Branched-chain amino acid transport system / permease component
PMDBBNKE_02009 9.73e-197 livH - - U ko:K01997 ko02010,ko02024,map02010,map02024 ko00000,ko00001,ko00002,ko02000 Branched-chain amino acid transport system / permease component
PMDBBNKE_02010 1.04e-269 livJ - - E ko:K01999 ko02010,ko02024,map02010,map02024 ko00000,ko00001,ko00002,ko02000 Receptor family ligand binding region
PMDBBNKE_02012 1.15e-43 - - - - - - - -
PMDBBNKE_02013 6.9e-168 zmp3 - - O - - - Zinc-dependent metalloprotease
PMDBBNKE_02014 2.88e-106 gtcA3 - - S - - - GtrA-like protein
PMDBBNKE_02015 3.35e-157 - - - K - - - Helix-turn-helix XRE-family like proteins
PMDBBNKE_02016 0.0 mntH - - P ko:K03322 - ko00000,ko02000 H( )-stimulated, divalent metal cation uptake system
PMDBBNKE_02017 1.18e-94 usp2 - - T - - - Belongs to the universal stress protein A family
PMDBBNKE_02018 2.87e-61 - - - - - - - -
PMDBBNKE_02019 1.81e-150 - - - S - - - SNARE associated Golgi protein
PMDBBNKE_02020 8.58e-65 czrA - - K ko:K22043 - ko00000,ko03000 Transcriptional regulator, ArsR family
PMDBBNKE_02021 7.89e-124 - - - P - - - Cadmium resistance transporter
PMDBBNKE_02022 0.0 yhcA - - V ko:K02003,ko:K02004 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
PMDBBNKE_02023 0.0 - - - P - - - Concanavalin A-like lectin/glucanases superfamily
PMDBBNKE_02024 2.03e-84 - - - - - - - -
PMDBBNKE_02025 1.93e-205 prpA3 3.1.3.16 - T ko:K01090 - ko00000,ko01000 Calcineurin-like phosphoesterase superfamily domain
PMDBBNKE_02026 2.86e-72 - - - - - - - -
PMDBBNKE_02027 1.02e-193 - - - K - - - Helix-turn-helix domain
PMDBBNKE_02028 3.91e-100 pts23A - - G ko:K02777 ko00010,ko00500,ko00520,ko02026,ko02060,ko05111,map00010,map00500,map00520,map02026,map02060,map05111 ko00000,ko00001,ko00002,ko01000,ko02000 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
PMDBBNKE_02029 7.47e-70 ptcB 2.7.1.196, 2.7.1.205 - G ko:K02760 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system, Lactose/Cellobiose specific IIB subunit
PMDBBNKE_02030 0.0 pts23C - - G ko:K02761 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko02000 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PMDBBNKE_02031 0.0 pbg6 3.2.1.86 GT1 G ko:K01223 ko00010,ko00500,map00010,map00500 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 1 family
PMDBBNKE_02032 7.48e-236 - - - GM - - - Male sterility protein
PMDBBNKE_02033 4.4e-101 - - - K - - - helix_turn_helix, mercury resistance
PMDBBNKE_02034 4.61e-101 - - - M - - - LysM domain
PMDBBNKE_02035 3.03e-130 - - - M - - - Lysin motif
PMDBBNKE_02036 1.4e-138 - - - S - - - SdpI/YhfL protein family
PMDBBNKE_02037 1.58e-72 nudA - - S - - - ASCH
PMDBBNKE_02038 5.76e-212 psaA - - P ko:K02077,ko:K11707 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Belongs to the bacterial solute-binding protein 9 family
PMDBBNKE_02039 3.57e-120 - - - - - - - -
PMDBBNKE_02040 1.92e-155 tag 3.2.2.20 - L ko:K01246 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 Methyladenine glycosylase
PMDBBNKE_02041 3.55e-281 - - - T - - - diguanylate cyclase
PMDBBNKE_02042 7.43e-97 - - - S - - - Psort location Cytoplasmic, score
PMDBBNKE_02043 0.0 umuC - - L ko:K03502 - ko00000,ko03400 impB/mucB/samB family C-terminal domain
PMDBBNKE_02044 1.17e-214 - - - K - - - Bacterial regulatory helix-turn-helix protein, lysR family
PMDBBNKE_02045 1.06e-95 - - - - - - - -
PMDBBNKE_02046 7.64e-167 - - - S - - - Belongs to the short-chain dehydrogenases reductases (SDR) family
PMDBBNKE_02047 5.37e-222 - - - C - - - C4-dicarboxylate transmembrane transporter activity
PMDBBNKE_02048 2.51e-150 - - - GM - - - NAD(P)H-binding
PMDBBNKE_02049 1.6e-118 - - - S ko:K06910 - ko00000 Phosphatidylethanolamine-binding protein
PMDBBNKE_02050 5.51e-101 yphH - - S - - - Cupin domain
PMDBBNKE_02051 2.06e-78 - - - I - - - sulfurtransferase activity
PMDBBNKE_02052 5.44e-178 gdh 1.1.1.47, 1.1.1.53 - IQ ko:K00034,ko:K00038 ko00030,ko00140,ko01100,ko01120,ko01200,map00030,map00140,map01100,map01120,map01200 ko00000,ko00001,ko01000 reductase
PMDBBNKE_02053 8.38e-152 - - - GM - - - NAD(P)H-binding
PMDBBNKE_02054 2.31e-277 - - - - - - - -
PMDBBNKE_02055 0.0 - - - V ko:K06147,ko:K18892 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter
PMDBBNKE_02056 0.0 XK27_09600 - - V ko:K06147,ko:K18891 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter, ATP-binding protein
PMDBBNKE_02057 1.3e-226 - - - O - - - protein import
PMDBBNKE_02058 6.8e-292 amd - - E - - - Peptidase family M20/M25/M40
PMDBBNKE_02059 2.43e-208 yhxD - - IQ - - - KR domain
PMDBBNKE_02061 9.38e-91 - - - - - - - -
PMDBBNKE_02062 1.74e-185 - - - K - - - Helix-turn-helix XRE-family like proteins
PMDBBNKE_02063 0.0 - - - E - - - Amino Acid
PMDBBNKE_02064 1.67e-86 lysM - - M - - - LysM domain
PMDBBNKE_02065 4.2e-286 dhaT 1.1.1.202 - C ko:K00086 ko00561,ko00640,map00561,map00640 ko00000,ko00001,ko01000 Dehydrogenase
PMDBBNKE_02066 6.8e-272 adhC 1.1.1.90 - C ko:K00055 ko00350,ko00360,ko00622,ko00623,ko01100,ko01120,ko01220,map00350,map00360,map00622,map00623,map01100,map01120,map01220 ko00000,ko00001,ko00002,ko01000 Zn-dependent alcohol dehydrogenases, class III
PMDBBNKE_02067 0.0 copA 3.6.3.3, 3.6.3.4, 3.6.3.5, 3.6.3.54 - P ko:K01533,ko:K01534,ko:K17686 ko01524,ko04016,map01524,map04016 ko00000,ko00001,ko01000 P-type ATPase
PMDBBNKE_02068 1.49e-58 - - - S - - - Cupredoxin-like domain
PMDBBNKE_02069 6.46e-83 - - - S - - - Cupredoxin-like domain
PMDBBNKE_02070 0.0 aapA - - M - - - Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
PMDBBNKE_02071 2.81e-181 - - - K - - - Helix-turn-helix domain
PMDBBNKE_02072 1.47e-51 - - - S ko:K07343 - ko00000 TfoX C-terminal domain
PMDBBNKE_02073 3.05e-289 hpk9 2.7.13.3 - T ko:K07706 ko02020,ko02024,map02020,map02024 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 GHKL domain
PMDBBNKE_02074 0.0 - - - - - - - -
PMDBBNKE_02075 2.69e-99 - - - - - - - -
PMDBBNKE_02076 2.85e-243 - - - S - - - Cell surface protein
PMDBBNKE_02077 6.02e-137 - - - S - - - WxL domain surface cell wall-binding
PMDBBNKE_02078 1.88e-225 - - - C - - - Alcohol dehydrogenase GroES-like domain
PMDBBNKE_02079 1.27e-90 - - - S - - - Iron-sulphur cluster biosynthesis
PMDBBNKE_02080 1.36e-148 - - - S - - - GyrI-like small molecule binding domain
PMDBBNKE_02081 1.25e-240 ynjC - - S - - - Cell surface protein
PMDBBNKE_02083 4.48e-130 - - - S - - - WxL domain surface cell wall-binding
PMDBBNKE_02084 1.47e-83 - - - - - - - -
PMDBBNKE_02085 2.28e-301 - - - NU - - - Mycoplasma protein of unknown function, DUF285
PMDBBNKE_02086 4.8e-156 - - - - - - - -
PMDBBNKE_02087 4.31e-149 - - - S - - - Haloacid dehalogenase-like hydrolase
PMDBBNKE_02088 3.25e-81 ytcD - - K - - - Transcriptional regulator, HxlR family
PMDBBNKE_02089 1.81e-272 - - - EGP - - - Major Facilitator
PMDBBNKE_02090 4.52e-147 - - - M - - - ErfK YbiS YcfS YnhG
PMDBBNKE_02091 0.0 asnB 6.3.5.4 - E ko:K01953 ko00250,ko01100,ko01110,map00250,map01100,map01110 ko00000,ko00001,ko01000,ko01002 Asparagine synthase
PMDBBNKE_02092 1.38e-174 - - - K ko:K07707 ko02020,ko02024,map02020,map02024 ko00000,ko00001,ko00002,ko02022 LytTr DNA-binding domain
PMDBBNKE_02093 3.09e-257 blpH 2.7.13.3 - T ko:K07706 ko02020,ko02024,map02020,map02024 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 GHKL domain
PMDBBNKE_02094 1.59e-130 - - - K - - - Bacterial regulatory proteins, tetR family
PMDBBNKE_02095 1.53e-215 - - - GM - - - NmrA-like family
PMDBBNKE_02096 0.0 gabD 1.2.1.16, 1.2.1.20, 1.2.1.79 - C ko:K00135 ko00250,ko00310,ko00350,ko00650,ko00760,ko01100,ko01120,map00250,map00310,map00350,map00650,map00760,map01100,map01120 ko00000,ko00001,ko00002,ko01000 Belongs to the aldehyde dehydrogenase family
PMDBBNKE_02097 0.0 - - - M - - - Glycosyl hydrolases family 25
PMDBBNKE_02098 4.66e-62 - - - S - - - Domain of unknown function (DUF1905)
PMDBBNKE_02099 1.27e-83 - - - K - - - HxlR-like helix-turn-helix
PMDBBNKE_02100 3.27e-170 - - - S - - - KR domain
PMDBBNKE_02101 2.46e-127 - - - K - - - Bacterial regulatory proteins, tetR family
PMDBBNKE_02102 3.47e-244 - 1.1.1.219 - GM ko:K00091 - ko00000,ko01000 Male sterility protein
PMDBBNKE_02103 1.09e-130 - - - S - - - Protein of unknown function (DUF1211)
PMDBBNKE_02104 1.97e-229 ydhF - - S - - - Aldo keto reductase
PMDBBNKE_02107 0.0 yfjF - - U - - - Sugar (and other) transporter
PMDBBNKE_02108 2.64e-141 - - - K - - - Bacterial regulatory proteins, tetR family
PMDBBNKE_02109 1.42e-218 fhuD - - P ko:K02016 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Periplasmic binding protein
PMDBBNKE_02110 6.37e-188 fhuC 3.6.3.34 - HP ko:K02013 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ABC transporter
PMDBBNKE_02111 2.58e-228 fhuB - - U ko:K02015 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PMDBBNKE_02112 3.32e-219 fhuG - - U ko:K02015 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PMDBBNKE_02113 3.74e-120 - - - K - - - Bacterial regulatory proteins, tetR family
PMDBBNKE_02114 3.89e-210 - - - GM - - - NmrA-like family
PMDBBNKE_02115 2.47e-168 - - - S - - - Belongs to the short-chain dehydrogenases reductases (SDR) family
PMDBBNKE_02116 4.01e-96 - 2.3.1.79 - S ko:K00661 - ko00000,ko01000 transferase hexapeptide repeat
PMDBBNKE_02117 1.83e-194 - - - IQ - - - Enoyl-(Acyl carrier protein) reductase
PMDBBNKE_02118 3.86e-85 - - - K - - - helix_turn_helix, mercury resistance
PMDBBNKE_02119 0.0 - - - M - - - LPXTG-motif cell wall anchor domain protein
PMDBBNKE_02120 3.36e-51 - - - M - - - LPXTG-motif cell wall anchor domain protein
PMDBBNKE_02121 7.24e-26 - - - S - - - Bacterial protein of unknown function (DUF916)
PMDBBNKE_02122 1.21e-170 - - - S - - - Bacterial protein of unknown function (DUF916)
PMDBBNKE_02123 1.87e-107 - - - S - - - WxL domain surface cell wall-binding
PMDBBNKE_02124 2.78e-254 - - - NU - - - Mycoplasma protein of unknown function, DUF285
PMDBBNKE_02125 1.97e-151 - - - K - - - Bacterial regulatory proteins, tetR family
PMDBBNKE_02126 0.0 lepA2 - - M ko:K03596 ko05134,map05134 ko00000,ko00001 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
PMDBBNKE_02127 0.0 nhaP4 - - P ko:K03316 - ko00000 Sodium proton antiporter
PMDBBNKE_02128 4.54e-202 - 3.6.1.22 - L ko:K03426 ko00760,ko01100,ko04146,map00760,map01100,map04146 ko00000,ko00001,ko01000 NADH pyrophosphatase zinc ribbon domain
PMDBBNKE_02129 2.72e-208 - - - K - - - LysR substrate binding domain
PMDBBNKE_02130 0.0 - 1.3.5.4 - C ko:K00244 ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020 ko00000,ko00001,ko00002,ko01000 FAD binding domain
PMDBBNKE_02131 0.0 - - - S - - - MucBP domain
PMDBBNKE_02132 1.9e-148 - - - K ko:K03489 - ko00000,ko03000 UTRA
PMDBBNKE_02133 0.0 bglA 3.2.1.86 GT1 G ko:K01223 ko00010,ko00500,map00010,map00500 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 1 family
PMDBBNKE_02134 9.2e-317 celD - - G ko:K02761 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko02000 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PMDBBNKE_02135 2.09e-85 - - - - - - - -
PMDBBNKE_02136 5.15e-16 - - - - - - - -
PMDBBNKE_02137 3.33e-40 pcaC 4.1.1.44 - S ko:K01607 ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220 ko00000,ko00001,ko01000 Carboxymuconolactone decarboxylase family
PMDBBNKE_02138 4.83e-31 - - - K - - - helix_turn_helix, mercury resistance
PMDBBNKE_02139 5.98e-85 - - - S - - - Protein of unknown function (DUF1093)
PMDBBNKE_02140 8.12e-282 - - - S - - - Membrane
PMDBBNKE_02141 2.97e-59 - - - S - - - Protein of unknown function (DUF3781)
PMDBBNKE_02142 5.35e-139 yoaZ - - S - - - intracellular protease amidase
PMDBBNKE_02143 1.35e-55 - - - K - - - HxlR-like helix-turn-helix
PMDBBNKE_02144 9.66e-77 - - - - - - - -
PMDBBNKE_02145 4.15e-81 - - - V ko:K02003 - ko00000,ko00002,ko02000 ABC transporter
PMDBBNKE_02146 5.31e-66 - - - K - - - Helix-turn-helix domain
PMDBBNKE_02147 9.09e-260 - - - C - - - Belongs to the LDH2 MDH2 oxidoreductase family
PMDBBNKE_02148 3.64e-47 - - CBM50 NU ko:K02395,ko:K19223 - ko00000,ko01000,ko01002,ko01011,ko02035 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
PMDBBNKE_02149 1.44e-148 yciB - - M - - - ErfK YbiS YcfS YnhG
PMDBBNKE_02150 8.09e-142 - 1.1.1.346 - S ko:K06221 - ko00000,ko01000 reductase
PMDBBNKE_02151 1.93e-139 - - - GM - - - NAD(P)H-binding
PMDBBNKE_02152 5.35e-102 - - - GM - - - SnoaL-like domain
PMDBBNKE_02153 0.0 qacA - - EGP - - - Fungal trichothecene efflux pump (TRI12)
PMDBBNKE_02154 2.52e-85 - - - S - - - Domain of unknown function (DUF4440)
PMDBBNKE_02155 7.9e-136 - - - K - - - Bacterial regulatory proteins, tetR family
PMDBBNKE_02156 1.34e-05 - - - L ko:K07483 - ko00000 transposase activity
PMDBBNKE_02157 8.53e-45 - - - L ko:K07483 - ko00000 transposase activity
PMDBBNKE_02159 6.79e-53 - - - - - - - -
PMDBBNKE_02160 5.06e-168 gpmA 5.4.2.11 - G ko:K01834 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PMDBBNKE_02161 9.26e-233 ydbI - - K - - - AI-2E family transporter
PMDBBNKE_02162 7.62e-270 xylR - - GK - - - ROK family
PMDBBNKE_02163 4.93e-149 - - - - - - - -
PMDBBNKE_02164 3.66e-295 cfa 2.1.1.79 - M ko:K00574 - ko00000,ko01000 cyclopropane-fatty-acyl-phospholipid synthase
PMDBBNKE_02165 1.41e-211 - - - - - - - -
PMDBBNKE_02166 1.66e-259 pkn2 - - KLT - - - Protein tyrosine kinase
PMDBBNKE_02167 5.03e-37 - - - S - - - Protein of unknown function (DUF4064)
PMDBBNKE_02168 2.47e-125 - - - S - - - Domain of unknown function (DUF4352)
PMDBBNKE_02169 9.69e-99 - - - S - - - Psort location Cytoplasmic, score
PMDBBNKE_02170 2.12e-72 - - - - - - - -
PMDBBNKE_02171 1.18e-141 - - - S ko:K07090 - ko00000 membrane transporter protein
PMDBBNKE_02172 5.93e-73 - - - S - - - branched-chain amino acid
PMDBBNKE_02173 2.05e-167 - - - E - - - branched-chain amino acid
PMDBBNKE_02174 1.66e-116 ywnH 2.3.1.183 - M ko:K03823 ko00440,ko01130,map00440,map01130 ko00000,ko00001,ko01000 Acetyltransferase (GNAT) domain
PMDBBNKE_02175 5.36e-305 dacA 3.4.16.4 - M ko:K07258 ko00550,ko01100,map00550,map01100 ko00000,ko00001,ko01000,ko01002,ko01011 Belongs to the peptidase S11 family
PMDBBNKE_02176 5.61e-273 hpk31 - - T - - - Histidine kinase
PMDBBNKE_02177 1.14e-159 vanR - - K - - - response regulator
PMDBBNKE_02178 2.4e-161 - - - S - - - Protein of unknown function (DUF1275)
PMDBBNKE_02179 3.84e-207 prsA 5.2.1.8 - M ko:K01802,ko:K07533 - ko00000,ko01000,ko03110 Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
PMDBBNKE_02180 3.49e-270 guaB 1.1.1.205 - F ko:K00088 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko04147 Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
PMDBBNKE_02181 3.49e-160 - - - S - - - Protein of unknown function (DUF1129)
PMDBBNKE_02182 6.6e-255 ychF - - J ko:K06942 - ko00000,ko03009 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
PMDBBNKE_02183 1.4e-40 yyzM - - S - - - Bacterial protein of unknown function (DUF951)
PMDBBNKE_02184 3.98e-200 spo0J - - K ko:K03497 - ko00000,ko03000,ko03036,ko04812 Belongs to the ParB family
PMDBBNKE_02185 1.01e-175 soj - - D ko:K03496 - ko00000,ko03036,ko04812 Sporulation initiation inhibitor
PMDBBNKE_02186 7.39e-192 noc - - K ko:K03497 - ko00000,ko03000,ko03036,ko04812 Belongs to the ParB family
PMDBBNKE_02187 3.66e-168 rsmG 2.1.1.170 - J ko:K03501 - ko00000,ko01000,ko03009,ko03036 Specifically methylates the N7 position of a guanine in 16S rRNA
PMDBBNKE_02188 1.66e-288 nupG - - F ko:K16323 - ko00000,ko02000 Nucleoside
PMDBBNKE_02189 0.0 yfhO - - S - - - Bacterial membrane protein YfhO
PMDBBNKE_02190 1.56e-190 - - - S - - - Alpha/beta hydrolase of unknown function (DUF915)
PMDBBNKE_02191 3.36e-216 - - - K - - - LysR substrate binding domain
PMDBBNKE_02192 9.83e-301 - - - EK - - - Aminotransferase, class I
PMDBBNKE_02193 1.11e-169 fliY - - ET ko:K02030,ko:K02424 ko02010,map02010 ko00000,ko00001,ko00002,ko02000,ko02035 Belongs to the bacterial solute-binding protein 3 family
PMDBBNKE_02194 2.11e-158 tcyB - - E ko:K10009 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter
PMDBBNKE_02195 3.02e-176 - - - E ko:K10010 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ABC transporter, ATP-binding protein
PMDBBNKE_02196 1.26e-161 tcyA - - ET ko:K02424 ko02010,map02010 ko00000,ko00001,ko00002,ko02000,ko02035 Belongs to the bacterial solute-binding protein 3 family
PMDBBNKE_02197 8.83e-127 - - - KT - - - response to antibiotic
PMDBBNKE_02198 8.52e-70 - - - K ko:K10947 - ko00000,ko03000 Transcriptional regulator
PMDBBNKE_02199 6.03e-133 - - - S - - - Protein of unknown function (DUF1700)
PMDBBNKE_02200 9.68e-202 - - - S - - - Putative adhesin
PMDBBNKE_02201 0.0 pts26BCA 2.7.1.211 - G ko:K02808,ko:K02809,ko:K02810 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 phosphotransferase system
PMDBBNKE_02202 0.0 malL 3.2.1.20 GH31 G ko:K01187 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 Alpha amylase, catalytic domain protein
PMDBBNKE_02203 1.06e-232 purR2 - - K ko:K02529 - ko00000,ko03000 Periplasmic binding proteins and sugar binding domain of LacI family
PMDBBNKE_02204 4.35e-262 - - - S - - - DUF218 domain
PMDBBNKE_02205 9.95e-165 ybbM - - S ko:K02069 - ko00000,ko00002,ko02000 Uncharacterised protein family (UPF0014)
PMDBBNKE_02206 1.76e-152 ybbL - - S ko:K02068 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
PMDBBNKE_02207 0.0 rumA_1 2.1.1.190, 2.1.1.35 - J ko:K00557,ko:K03215 - ko00000,ko01000,ko03009,ko03016 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PMDBBNKE_02208 6.26e-101 - - - - - - - -
PMDBBNKE_02209 5.43e-194 qorB 1.6.5.2 - GM ko:K19267 ko00130,ko01110,map00130,map01110 ko00000,ko00001,ko01000 NmrA-like family
PMDBBNKE_02210 8.33e-189 - - - S - - - haloacid dehalogenase-like hydrolase
PMDBBNKE_02211 1.29e-115 scrK 2.7.1.4 - GK ko:K00847 ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100 ko00000,ko00001,ko01000 ROK family
PMDBBNKE_02212 0.0 mngB 3.2.1.170 GH38 G ko:K15524 - ko00000,ko01000 Glycosyl hydrolases family 38 N-terminal domain
PMDBBNKE_02213 6.69e-155 fptC - - U ko:K02770 ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060 ko00000,ko00001,ko00002,ko02000 Phosphotransferase system, EIIC
PMDBBNKE_02214 2.52e-35 - 2.7.1.202 - G ko:K02769 ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system, Lactose/Cellobiose specific IIB subunit
PMDBBNKE_02215 5.55e-22 - - - G ko:K11203 - ko00000,ko00002,ko02000 PTS system, fructose subfamily
PMDBBNKE_02216 2.11e-104 manR - - GKT ko:K02538,ko:K03491 - ko00000,ko03000 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PMDBBNKE_02217 4.08e-101 - - - K - - - MerR family regulatory protein
PMDBBNKE_02218 5.91e-200 - - - GM - - - NmrA-like family
PMDBBNKE_02219 0.0 pts28ABC - - G ko:K02755,ko:K02756,ko:K02757 ko02060,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 phosphotransferase system
PMDBBNKE_02220 1.25e-164 nth2 - - L ko:K07457 - ko00000 Base excision DNA repair protein, HhH-GPD family
PMDBBNKE_02222 2.19e-88 - - - S - - - NADPH-dependent FMN reductase
PMDBBNKE_02223 1.61e-28 - - - S - - - NADPH-dependent FMN reductase
PMDBBNKE_02224 8.44e-304 - - - S - - - module of peptide synthetase
PMDBBNKE_02225 3.32e-135 - - - - - - - -
PMDBBNKE_02226 1.55e-114 perR - - P ko:K03711,ko:K09825 - ko00000,ko03000 Belongs to the Fur family
PMDBBNKE_02227 1.28e-77 - - - S - - - Enterocin A Immunity
PMDBBNKE_02228 6.46e-49 - - - S - - - Phospholipase_D-nuclease N-terminal
PMDBBNKE_02229 7.93e-217 - 3.1.4.17, 3.1.4.53 - S ko:K01120,ko:K03651 ko00230,ko02025,map00230,map02025 ko00000,ko00001,ko01000 Calcineurin-like phosphoesterase
PMDBBNKE_02230 2.8e-135 - - - J - - - Acetyltransferase (GNAT) domain
PMDBBNKE_02231 4.14e-84 lrgA - - S ko:K05338 ko02020,map02020 ko00000,ko00001,ko02000 LrgA family
PMDBBNKE_02232 2.88e-164 lrgB - - M ko:K05339 ko02020,map02020 ko00000,ko00001 LrgB-like family
PMDBBNKE_02233 3.84e-186 WQ51_01275 - - S - - - EDD domain protein, DegV family
PMDBBNKE_02234 1.03e-34 - - - - - - - -
PMDBBNKE_02235 1.48e-152 yugP - - S ko:K06973 - ko00000 Putative neutral zinc metallopeptidase
PMDBBNKE_02236 0.0 - 1.3.99.26, 1.3.99.28, 1.3.99.29, 1.3.99.31 - Q ko:K10027 ko00906,ko01100,ko01110,map00906,map01100,map01110 ko00000,ko00001,ko01000 Flavin containing amine oxidoreductase
PMDBBNKE_02237 1.04e-212 crtM 2.5.1.32, 2.5.1.99 - I ko:K02291 ko00906,ko01062,ko01100,ko01110,map00906,map01062,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko01006 Squalene/phytoene synthase
PMDBBNKE_02238 4.68e-235 - - - D ko:K06889 - ko00000 Alpha beta
PMDBBNKE_02239 5.81e-251 glxK 2.7.1.165 - G ko:K00865 ko00260,ko00561,ko00630,ko01100,ko01120,ko01130,map00260,map00561,map00630,map01100,map01120,map01130 ko00000,ko00001,ko01000 Belongs to the glycerate kinase type-1 family
PMDBBNKE_02240 0.0 gshR3 1.8.1.7 - C ko:K00383 ko00480,ko04918,map00480,map04918 ko00000,ko00001,ko01000 Glutathione reductase
PMDBBNKE_02241 2.49e-73 - - - S - - - Enterocin A Immunity
PMDBBNKE_02242 7.41e-315 purB 4.3.2.2 - F ko:K01756 ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
PMDBBNKE_02243 0.0 purA 6.3.4.4 - F ko:K01939 ko00230,ko00250,ko01100,map00230,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
PMDBBNKE_02244 7.21e-236 guaC 1.7.1.7 - F ko:K00364 ko00230,map00230 ko00000,ko00001,ko01000 Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
PMDBBNKE_02245 1.45e-187 ptp2 3.1.3.48 - T ko:K01104 - ko00000,ko01000 Tyrosine phosphatase family
PMDBBNKE_02246 0.0 cls - - I ko:K06131 ko00564,ko01100,map00564,map01100 ko00000,ko00001,ko01000 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PMDBBNKE_02248 1.88e-106 - - - - - - - -
PMDBBNKE_02249 0.0 yhdG - - E ko:K03294 - ko00000 C-terminus of AA_permease
PMDBBNKE_02251 0.0 kup - - P ko:K03549 - ko00000,ko02000 Transport of potassium into the cell
PMDBBNKE_02252 1.07e-211 yeaB - - P - - - Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
PMDBBNKE_02253 4.41e-228 ydbI - - K - - - AI-2E family transporter
PMDBBNKE_02254 1.01e-277 metE 2.1.1.14 - E ko:K00549 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 methionine synthase, vitamin-B12 independent
PMDBBNKE_02255 1.15e-77 - - - P ko:K03297 - ko00000,ko02000 Small Multidrug Resistance protein
PMDBBNKE_02256 1.97e-60 qacH - - U ko:K03297 - ko00000,ko02000 Small Multidrug Resistance protein
PMDBBNKE_02257 2.94e-149 hlyIII - - S ko:K11068 - ko00000,ko02042 protein, hemolysin III
PMDBBNKE_02258 7.27e-73 - - - K ko:K21903 - ko00000,ko03000 helix_turn_helix, Arsenical Resistance Operon Repressor
PMDBBNKE_02259 1.3e-207 czcD - - P ko:K16264 - ko00000,ko02000 cation diffusion facilitator family transporter
PMDBBNKE_02260 1.63e-133 - - - K - - - Helix-turn-helix XRE-family like proteins
PMDBBNKE_02262 2.77e-30 - - - - - - - -
PMDBBNKE_02264 3.91e-124 tag2 3.2.2.20 - L ko:K01246 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 glycosylase
PMDBBNKE_02265 4.79e-272 folP 2.5.1.15 - H ko:K00796 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko00002,ko01000 dihydropteroate synthase
PMDBBNKE_02266 4.4e-138 folQ 3.6.1.66 - F ko:K02428 ko00230,map00230 ko00000,ko00001,ko01000 Ham1 family
PMDBBNKE_02267 0.0 folC 6.3.2.12, 6.3.2.17 - H ko:K11754 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the folylpolyglutamate synthase family
PMDBBNKE_02268 1.8e-134 folE 2.7.6.3, 3.5.4.16 - F ko:K00950,ko:K01495 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko00002,ko01000 GTP cyclohydrolase 1
PMDBBNKE_02269 1.59e-121 folK 2.7.6.3 - H ko:K00950 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko00002,ko01000 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
PMDBBNKE_02270 9.61e-84 folB 1.13.11.81, 4.1.2.25, 5.1.99.8 - H ko:K01633 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
PMDBBNKE_02271 4.26e-109 cvpA - - S - - - Colicin V production protein
PMDBBNKE_02272 2.28e-215 - - - P ko:K02077 - ko00000,ko00002,ko02000 Belongs to the bacterial solute-binding protein 9 family
PMDBBNKE_02273 4.41e-316 - - - EGP - - - Major Facilitator
PMDBBNKE_02275 4.54e-54 - - - - - - - -
PMDBBNKE_02276 3.74e-125 - - - V - - - VanZ like family
PMDBBNKE_02277 1.87e-249 - - - V - - - Beta-lactamase
PMDBBNKE_02278 0.0 pflB 2.3.1.54 - C ko:K00656 ko00620,ko00640,ko00650,ko01100,ko01120,map00620,map00640,map00650,map01100,map01120 ko00000,ko00001,ko01000 Pyruvate formate lyase-like
PMDBBNKE_02279 6.47e-206 pflA 1.97.1.4 - C ko:K04069 - ko00000,ko01000 Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PMDBBNKE_02280 8.93e-71 - - - S - - - Pfam:DUF59
PMDBBNKE_02281 1.05e-223 ydhF - - S - - - Aldo keto reductase
PMDBBNKE_02282 1.66e-40 - - - FG - - - HIT domain
PMDBBNKE_02283 3.23e-73 - - - FG - - - HIT domain
PMDBBNKE_02284 5.09e-51 - - - S - - - Bacteriocin-protection, YdeI or OmpD-Associated
PMDBBNKE_02285 4.29e-101 - - - - - - - -
PMDBBNKE_02286 8.79e-156 - - - E - - - GDSL-like Lipase/Acylhydrolase family
PMDBBNKE_02287 0.0 - - - U ko:K03451 - ko00000 Belongs to the BCCT transporter (TC 2.A.15) family
PMDBBNKE_02288 0.0 cadA - - P - - - P-type ATPase
PMDBBNKE_02290 4.21e-158 - - - S - - - YjbR
PMDBBNKE_02291 3.19e-283 - - - S - - - Uncharacterized protein conserved in bacteria (DUF2325)
PMDBBNKE_02292 0.0 ade 3.5.4.2 - F ko:K01486 ko00230,ko01100,map00230,map01100 ko00000,ko00001,ko01000 Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
PMDBBNKE_02293 7.12e-256 glmS2 - - M - - - SIS domain
PMDBBNKE_02294 3.58e-36 - - - S - - - Belongs to the LOG family
PMDBBNKE_02295 0.0 nhaC - - C ko:K03315 - ko00000,ko02000 Na H antiporter NhaC
PMDBBNKE_02296 0.0 cycA - - E ko:K03293,ko:K11737 - ko00000,ko02000 Amino acid permease
PMDBBNKE_02297 2.65e-215 - - - S - - - Alpha/beta hydrolase of unknown function (DUF915)
PMDBBNKE_02298 1.65e-112 pgpA - - I - - - Phosphatidylglycerophosphatase A
PMDBBNKE_02299 1.36e-209 - - - GM - - - NmrA-like family
PMDBBNKE_02300 1.24e-85 - - - K ko:K22296 - ko00000,ko03000 Winged helix DNA-binding domain
PMDBBNKE_02301 4.06e-93 spxA - - P ko:K16509 - ko00000 ArsC family
PMDBBNKE_02302 3.46e-87 yeaO - - S - - - Protein of unknown function, DUF488
PMDBBNKE_02303 1.7e-70 - - - - - - - -
PMDBBNKE_02304 4.98e-275 mutY - - L ko:K03575 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 A G-specific adenine glycosylase
PMDBBNKE_02305 2.11e-82 - - - - - - - -
PMDBBNKE_02306 5.3e-110 - - - - - - - -
PMDBBNKE_02307 1.31e-102 hsp3 - - O ko:K13993 ko04141,map04141 ko00000,ko00001,ko03110 Belongs to the small heat shock protein (HSP20) family
PMDBBNKE_02308 4.59e-74 - - - - - - - -
PMDBBNKE_02309 4.79e-21 - - - - - - - -
PMDBBNKE_02310 3.57e-150 - - - GM - - - NmrA-like family
PMDBBNKE_02311 2.52e-107 - - - S ko:K02348 - ko00000 GNAT family
PMDBBNKE_02312 1.63e-203 - - - EG - - - EamA-like transporter family
PMDBBNKE_02313 2.66e-155 - - - S - - - membrane
PMDBBNKE_02314 1.47e-144 - - - S - - - VIT family
PMDBBNKE_02315 4.38e-243 pva2 3.5.1.24 - M ko:K01442 ko00120,ko00121,ko01100,map00120,map00121,map01100 ko00000,ko00001,ko01000 Linear amide C-N hydrolases, choloylglycine hydrolase family
PMDBBNKE_02316 0.0 copB 3.6.3.3, 3.6.3.4, 3.6.3.5, 3.6.3.54 - P ko:K01533,ko:K01534,ko:K17686 ko01524,ko04016,map01524,map04016 ko00000,ko00001,ko01000 P-type ATPase
PMDBBNKE_02317 4.83e-98 copR - - K ko:K02171 ko01501,map01501 ko00000,ko00001,ko00002,ko01504,ko03000 Copper transport repressor CopY TcrY
PMDBBNKE_02318 4.26e-54 - - - - - - - -
PMDBBNKE_02319 8.43e-97 - - - S - - - COG NOG18757 non supervised orthologous group
PMDBBNKE_02320 6.89e-312 lmrB - - U ko:K18926 - ko00000,ko00002,ko02000 Belongs to the major facilitator superfamily
PMDBBNKE_02321 7.21e-35 - - - - - - - -
PMDBBNKE_02322 4.39e-66 - - - - - - - -
PMDBBNKE_02323 8.75e-85 - - - S - - - Protein of unknown function (DUF1398)
PMDBBNKE_02324 0.0 - - - U - - - Belongs to the purine-cytosine permease (2.A.39) family
PMDBBNKE_02325 1.77e-282 mdtG - - EGP ko:K08161 - ko00000,ko02000 Transporter, major facilitator family protein
PMDBBNKE_02326 2.44e-230 ybcH - - D ko:K06889 - ko00000 Alpha beta
PMDBBNKE_02327 6.1e-101 - - - K - - - Domain of unknown function (DUF1836)
PMDBBNKE_02328 1.14e-110 - - - F - - - Nucleoside 2-deoxyribosyltransferase
PMDBBNKE_02329 0.0 pacL3 3.6.3.8 - P ko:K01537 - ko00000,ko01000 Cation transporter/ATPase, N-terminus
PMDBBNKE_02330 0.0 yfkN 3.1.3.6, 3.1.4.16 - F ko:K01119 ko00230,ko00240,map00230,map00240 ko00000,ko00001,ko01000 Belongs to the 5'-nucleotidase family
PMDBBNKE_02331 2.8e-205 ywkB - - S ko:K07088 - ko00000 Membrane transport protein
PMDBBNKE_02332 1.36e-209 yvgN - - C - - - Aldo keto reductase
PMDBBNKE_02333 2.57e-171 - - - S - - - Putative threonine/serine exporter
PMDBBNKE_02334 2.07e-102 - - - S - - - Threonine/Serine exporter, ThrE
PMDBBNKE_02335 1.05e-56 - - - S - - - Protein of unknown function (DUF1093)
PMDBBNKE_02336 2.69e-190 uppP 3.6.1.27 - V ko:K06153 ko00550,map00550 ko00000,ko00001,ko01000,ko01011 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
PMDBBNKE_02337 5.94e-118 ymdB - - S - - - Macro domain protein
PMDBBNKE_02338 6.2e-122 - - - K ko:K22041 - ko00000,ko03000 transcriptional regulator
PMDBBNKE_02339 1.58e-66 - - - - - - - -
PMDBBNKE_02340 9.81e-212 - - - S - - - Protein of unknown function (DUF1002)
PMDBBNKE_02341 0.0 - - - - - - - -
PMDBBNKE_02342 6.48e-244 - - - S - - - Bacterial protein of unknown function (DUF916)
PMDBBNKE_02343 5.48e-171 - - - S - - - WxL domain surface cell wall-binding
PMDBBNKE_02344 2.7e-175 yesN - - T ko:K07720 ko02020,map02020 ko00000,ko00001,ko00002,ko02022 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
PMDBBNKE_02345 1.31e-114 - - - K - - - Winged helix DNA-binding domain
PMDBBNKE_02346 3.81e-150 - - - K - - - Bacterial regulatory proteins, tetR family
PMDBBNKE_02347 0.0 pckA 4.1.1.49 - H ko:K01610 ko00010,ko00020,ko00620,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00710,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Phosphoenolpyruvate carboxykinase
PMDBBNKE_02348 4.45e-38 - - - - - - - -
PMDBBNKE_02349 0.0 gadB 4.1.1.15, 4.1.2.27 - E ko:K01580,ko:K01634 ko00250,ko00410,ko00430,ko00600,ko00650,ko01100,ko01110,ko01120,ko02024,ko04071,ko04727,ko04940,map00250,map00410,map00430,map00600,map00650,map01100,map01110,map01120,map02024,map04071,map04727,map04940 ko00000,ko00001,ko00002,ko01000 Belongs to the group II decarboxylase family
PMDBBNKE_02350 2.04e-107 - - - M - - - PFAM NLP P60 protein
PMDBBNKE_02351 6.18e-71 - - - - - - - -
PMDBBNKE_02352 9.96e-82 - - - - - - - -
PMDBBNKE_02355 6.57e-84 - - - V - - - VanZ like family
PMDBBNKE_02357 1.17e-15 - - - K - - - Cro/C1-type HTH DNA-binding domain
PMDBBNKE_02358 1.53e-139 - - - - - - - -
PMDBBNKE_02359 2.56e-70 - - - S - - - Uncharacterized protein conserved in bacteria (DUF2316)
PMDBBNKE_02360 5.87e-207 - - - S ko:K07045 - ko00000 Amidohydrolase
PMDBBNKE_02361 2.36e-136 - - - K - - - transcriptional regulator
PMDBBNKE_02362 2.5e-232 ywbN - - P ko:K07223,ko:K16301 - ko00000,ko01000,ko02000 Peroxidase
PMDBBNKE_02363 5.92e-175 menG 2.1.1.163, 2.1.1.201 - H ko:K03183 ko00130,ko01100,ko01110,map00130,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
PMDBBNKE_02364 7.76e-168 - - - S - - - Gram-negative-bacterium-type cell wall biogenesis
PMDBBNKE_02365 1.77e-235 - - - E - - - GDSL-like Lipase/Acylhydrolase family
PMDBBNKE_02366 0.0 cadA 3.6.3.3, 3.6.3.5 - P ko:K01534 - ko00000,ko01000 P-type ATPase
PMDBBNKE_02367 9.44e-183 glpF - - U ko:K02440 - ko00000,ko02000 Belongs to the MIP aquaporin (TC 1.A.8) family
PMDBBNKE_02368 9.52e-72 trxA3 - - O ko:K03671 ko04621,ko05418,map04621,map05418 ko00000,ko00001,ko03110 Thioredoxin-like domain
PMDBBNKE_02369 6.85e-55 yrkD - - S - - - Metal-sensitive transcriptional repressor
PMDBBNKE_02370 1.01e-26 - - - - - - - -
PMDBBNKE_02371 2.03e-124 dpsB - - P - - - Belongs to the Dps family
PMDBBNKE_02372 2.98e-44 copZ - - P - - - Heavy-metal-associated domain
PMDBBNKE_02373 1.82e-152 rcfA - - K ko:K21562 - ko00000,ko03000 Transcriptional regulator, Crp Fnr family
PMDBBNKE_02374 0.0 pepO - - O ko:K07386 - ko00000,ko01000,ko01002 Peptidase family M13
PMDBBNKE_02375 5.23e-107 yoaA - - J - - - COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
PMDBBNKE_02376 0.0 nox 1.6.3.4 - C ko:K17869 - ko00000,ko01000 NADH oxidase
PMDBBNKE_02377 0.0 - - - S - - - Leucine-rich repeat (LRR) protein
PMDBBNKE_02378 1.83e-235 - - - S - - - Cell surface protein
PMDBBNKE_02379 8.67e-160 - - - S - - - WxL domain surface cell wall-binding
PMDBBNKE_02380 4.23e-129 - - - S - - - WxL domain surface cell wall-binding
PMDBBNKE_02381 1.58e-59 - - - - - - - -
PMDBBNKE_02382 7.01e-135 yezE - - K ko:K16137 - ko00000,ko03000 Bacterial regulatory proteins, tetR family
PMDBBNKE_02383 1.03e-65 - - - - - - - -
PMDBBNKE_02384 4.16e-314 - - - S - - - Putative metallopeptidase domain
PMDBBNKE_02385 4.03e-283 - - - S - - - associated with various cellular activities
PMDBBNKE_02386 1.95e-140 aqpZ - - U ko:K06188 - ko00000,ko02000 Belongs to the MIP aquaporin (TC 1.A.8) family
PMDBBNKE_02387 0.0 ubiB - - S ko:K03688 - ko00000 ABC1 family
PMDBBNKE_02388 0.0 brnQ - - U ko:K03311 - ko00000 Component of the transport system for branched-chain amino acids
PMDBBNKE_02389 0.0 lacS - - G ko:K11104,ko:K16209 - ko00000,ko02000 Transporter
PMDBBNKE_02390 0.0 lacA 3.2.1.23 - G ko:K12308 ko00052,map00052 ko00000,ko00001,ko01000 -beta-galactosidase
PMDBBNKE_02391 4.73e-242 lacR - - K ko:K02529 - ko00000,ko03000 Transcriptional regulator
PMDBBNKE_02392 0.0 - 3.2.1.40 - G ko:K05989 - ko00000,ko01000 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain
PMDBBNKE_02393 8.69e-295 - - - P ko:K06610 - ko00000,ko02000 Sugar (and other) transporter
PMDBBNKE_02394 0.0 ram2 3.2.1.40 - G ko:K05989 - ko00000,ko01000 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain
PMDBBNKE_02395 5.06e-298 - - - P ko:K06610 - ko00000,ko02000 Major Facilitator Superfamily
PMDBBNKE_02396 1.29e-235 - - - K - - - helix_turn_helix, arabinose operon control protein
PMDBBNKE_02397 9.21e-142 fic - - D ko:K04095 - ko00000,ko03036 Fic/DOC family
PMDBBNKE_02398 3.4e-100 - - - K ko:K07726 - ko00000,ko03000 Helix-turn-helix XRE-family like proteins
PMDBBNKE_02399 3.1e-194 galR - - K ko:K02529 - ko00000,ko03000 Transcriptional regulator
PMDBBNKE_02400 4.8e-10 galR - - K ko:K02529 - ko00000,ko03000 Transcriptional regulator
PMDBBNKE_02401 0.0 galT 2.7.7.12 - G ko:K00965 ko00052,ko00520,ko01100,ko04917,map00052,map00520,map01100,map04917 ko00000,ko00001,ko00002,ko01000 UDP-glucose--hexose-1-phosphate uridylyltransferase
PMDBBNKE_02402 1.26e-245 galE 5.1.3.2 - M ko:K01784 ko00052,ko00520,ko01100,map00052,map00520,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the NAD(P)-dependent epimerase dehydratase family
PMDBBNKE_02403 1.65e-286 galK 2.7.1.6 - F ko:K00849 ko00052,ko00520,ko01100,map00052,map00520,map01100 ko00000,ko00001,ko00002,ko01000,ko04147 Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
PMDBBNKE_02404 0.0 lacL 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 2 family
PMDBBNKE_02405 1.64e-238 lacM 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 beta-galactosidase
PMDBBNKE_02406 0.0 melA 3.2.1.22 - G ko:K07407 ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603 ko00000,ko00001,ko01000 alpha-galactosidase
PMDBBNKE_02407 0.0 lacP - - G ko:K11104,ko:K16209 - ko00000,ko02000 Transporter
PMDBBNKE_02408 4.27e-253 galM3 5.1.3.3 - G ko:K01785 ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the interconversion of alpha and beta anomers of maltose
PMDBBNKE_02409 3.69e-232 galR - - K ko:K02529 - ko00000,ko03000 Transcriptional regulator
PMDBBNKE_02410 8.93e-249 tas3 - - C ko:K19265 - ko00000,ko01000 Aldo keto reductase family protein
PMDBBNKE_02411 2.02e-85 - - - S - - - pyridoxamine 5-phosphate
PMDBBNKE_02412 0.0 - 1.3.5.4 - C ko:K00244 ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020 ko00000,ko00001,ko00002,ko01000 FAD binding domain
PMDBBNKE_02413 2.49e-228 apbE3 2.7.1.180 - H ko:K03734 - ko00000,ko01000 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
PMDBBNKE_02414 6.76e-168 aroD 4.2.1.10 - E ko:K03785 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis-dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3- dehydroshikimate
PMDBBNKE_02415 4.63e-275 - - - G - - - Transporter
PMDBBNKE_02416 1.66e-215 aroE 1.1.1.25 - E ko:K00014 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
PMDBBNKE_02417 5.79e-209 - - - K - - - Transcriptional regulator, LysR family
PMDBBNKE_02418 4.74e-268 - - - G - - - Major Facilitator Superfamily
PMDBBNKE_02419 2.09e-83 - - - - - - - -
PMDBBNKE_02420 2.63e-200 estA - - S - - - Putative esterase
PMDBBNKE_02421 5.44e-174 - - - K - - - UTRA domain
PMDBBNKE_02422 1.87e-316 pts29C - - G ko:K02761 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko02000 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PMDBBNKE_02423 3.06e-212 murQ 4.2.1.126 - G ko:K07106 ko00520,ko01100,map00520,map01100 ko00000,ko00001,ko01000 Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
PMDBBNKE_02424 1.58e-207 - - - G - - - BadF/BadG/BcrA/BcrD ATPase family
PMDBBNKE_02425 1.94e-270 - - - S ko:K09963 - ko00000 Bacterial protein of unknown function (DUF871)
PMDBBNKE_02426 0.0 bglH 3.2.1.86 GT1 G ko:K01223 ko00010,ko00500,map00010,map00500 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 1 family
PMDBBNKE_02427 0.0 bglP - - G ko:K02755,ko:K02756,ko:K02757 ko02060,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 phosphotransferase system
PMDBBNKE_02428 3.72e-200 bglG4 - - K ko:K03488 - ko00000,ko03000 CAT RNA binding domain
PMDBBNKE_02429 0.0 pbg9 3.2.1.86 GT1 G ko:K01223 ko00010,ko00500,map00010,map00500 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 1 family
PMDBBNKE_02430 0.0 bglH 3.2.1.86 GT1 G ko:K01223 ko00010,ko00500,map00010,map00500 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 1 family
PMDBBNKE_02431 0.0 pts33BCA - - G ko:K02755,ko:K02756,ko:K02757 ko02060,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 phosphotransferase system
PMDBBNKE_02432 2.16e-202 bglG5 - - K ko:K03488 - ko00000,ko03000 CAT RNA binding domain
PMDBBNKE_02433 0.0 treP 2.4.1.64 GH65 G ko:K05342 ko00500,ko01100,map00500,map01100 ko00000,ko00001,ko01000 hydrolase, family 65, central catalytic
PMDBBNKE_02434 2.66e-222 cytR - - K ko:K02529,ko:K03604 - ko00000,ko03000 Transcriptional regulator, LacI family
PMDBBNKE_02435 0.0 - - - G ko:K16211 - ko00000,ko02000 Major Facilitator
PMDBBNKE_02436 0.0 agl 3.2.1.20 GH31 G ko:K01187 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 31 family
PMDBBNKE_02438 1.15e-236 cbh 3.5.1.24 - M ko:K01442 ko00120,ko00121,ko01100,map00120,map00121,map01100 ko00000,ko00001,ko01000 Linear amide C-N hydrolase, choloylglycine hydrolase family protein
PMDBBNKE_02439 9e-187 yxeH - - S - - - hydrolase
PMDBBNKE_02440 0.0 tkt 2.2.1.1 - H ko:K00615 ko00030,ko00710,ko01051,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01051,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
PMDBBNKE_02441 8.34e-147 tal 2.2.1.2 - F ko:K00616 ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
PMDBBNKE_02442 1.43e-306 ulaA - - S ko:K03475 ko00053,ko01100,ko01120,ko02060,map00053,map01100,map01120,map02060 ko00000,ko00001,ko00002,ko02000 PTS system sugar-specific permease component
PMDBBNKE_02443 2.97e-60 ulaB 2.7.1.194 - G ko:K02822 ko00053,ko01100,ko01120,ko02060,map00053,map01100,map01120,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 Phosphotransferase system galactitol-specific IIB component
PMDBBNKE_02444 1.58e-101 - 2.7.1.194 - G ko:K02821 ko00053,ko01100,ko01120,ko02060,map00053,map01100,map01120,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PMDBBNKE_02445 0.0 - - - G ko:K03483 - ko00000,ko03000 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PMDBBNKE_02446 4.53e-146 gph3 - - S - - - Haloacid dehalogenase-like hydrolase
PMDBBNKE_02447 5.26e-247 - 1.1.1.14 - C ko:K00008 ko00040,ko00051,ko01100,map00040,map00051,map01100 ko00000,ko00001,ko00002,ko01000 Zinc-binding dehydrogenase
PMDBBNKE_02448 8.37e-296 gatC - - G ko:K02775 ko00052,ko01100,ko02060,map00052,map01100,map02060 ko00000,ko00001,ko00002,ko02000 PTS system sugar-specific permease component
PMDBBNKE_02449 6e-60 - 2.7.1.200 - G ko:K02774 ko00052,ko01100,ko02060,map00052,map01100,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system, Lactose/Cellobiose specific IIB subunit
PMDBBNKE_02450 1.1e-103 - 2.7.1.200, 2.7.1.204 - G ko:K02773,ko:K20112 ko00052,ko01100,ko02060,map00052,map01100,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PMDBBNKE_02451 3.05e-161 - - - K ko:K02444 - ko00000,ko03000 DeoR C terminal sensor domain
PMDBBNKE_02452 0.0 xfp 4.1.2.22, 4.1.2.9 - G ko:K01621 ko00030,ko00710,ko01100,ko01120,map00030,map00710,map01100,map01120 ko00000,ko00001,ko01000 Phosphoketolase
PMDBBNKE_02453 1.09e-66 yueI - - S - - - Protein of unknown function (DUF1694)
PMDBBNKE_02454 4.84e-14 yueI - - S - - - Protein of unknown function (DUF1694)
PMDBBNKE_02455 6.83e-133 maa 2.3.1.79 - S ko:K00661 - ko00000,ko01000 Maltose O-acetyltransferase
PMDBBNKE_02456 0.0 araA 5.3.1.4 - G ko:K01804 ko00040,ko01100,map00040,map01100 ko00000,ko00001,ko01000 Catalyzes the conversion of L-arabinose to L-ribulose
PMDBBNKE_02457 1.06e-175 araD 5.1.3.4 - G ko:K03077 ko00040,ko00053,ko01100,ko01120,map00040,map00053,map01100,map01120 ko00000,ko00001,ko00002,ko01000 links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source
PMDBBNKE_02458 0.0 araB 2.7.1.16 - G ko:K00853 ko00040,ko01100,map00040,map01100 ko00000,ko00001,ko01000 carbohydrate kinase FGGY
PMDBBNKE_02459 0.0 araP - - U - - - Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family
PMDBBNKE_02460 1.2e-262 araR - - K ko:K02103 - ko00000,ko03000 Transcriptional regulator
PMDBBNKE_02461 3.76e-180 - - - K - - - Helix-turn-helix domain, rpiR family
PMDBBNKE_02462 6.47e-95 - - - S - - - Protein of unknown function (DUF1694)
PMDBBNKE_02463 2.54e-210 - - - I - - - alpha/beta hydrolase fold
PMDBBNKE_02464 1.65e-206 - - - I - - - alpha/beta hydrolase fold
PMDBBNKE_02465 0.0 - - - E ko:K03307 - ko00000 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
PMDBBNKE_02466 4.01e-263 napA - - P - - - Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
PMDBBNKE_02467 3.83e-174 - - - G - - - Xylose isomerase domain protein TIM barrel
PMDBBNKE_02468 2.93e-200 nanK - - GK - - - ROK family
PMDBBNKE_02469 1.86e-210 nanA 4.1.3.3 - EM ko:K01639 ko00520,map00520 ko00000,ko00001,ko01000 Neu5Ac) to form pyruvate and N-acetylmannosamine (ManNAc) via a Schiff base intermediate
PMDBBNKE_02470 3.53e-158 nanE 5.1.3.9 - G ko:K01788 ko00520,map00520 ko00000,ko00001,ko01000 Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
PMDBBNKE_02471 2.28e-291 - - - S - - - Pyridine nucleotide-disulphide oxidoreductase
PMDBBNKE_02472 2.43e-91 - - - S - - - Pyrimidine dimer DNA glycosylase
PMDBBNKE_02473 1.22e-115 - - - T - - - ECF transporter, substrate-specific component
PMDBBNKE_02474 1.06e-16 - - - - - - - -
PMDBBNKE_02475 1.96e-21 ytgB - - S - - - Transglycosylase associated protein
PMDBBNKE_02476 3.5e-222 katA 1.11.1.6 - C ko:K03781 ko00380,ko00630,ko01110,ko01130,ko01200,ko04011,ko04016,ko04068,ko04146,ko04211,ko04212,ko04213,ko05014,map00380,map00630,map01110,map01130,map01200,map04011,map04016,map04068,map04146,map04211,map04212,map04213,map05014 ko00000,ko00001,ko00002,ko01000 Belongs to the catalase family
PMDBBNKE_02477 1.78e-119 katA 1.11.1.6 - C ko:K03781 ko00380,ko00630,ko01110,ko01130,ko01200,ko04011,ko04016,ko04068,ko04146,ko04211,ko04212,ko04213,ko05014,map00380,map00630,map01110,map01130,map01200,map04011,map04016,map04068,map04146,map04211,map04212,map04213,map05014 ko00000,ko00001,ko00002,ko01000 Belongs to the catalase family
PMDBBNKE_02478 5.38e-101 nrp - - K ko:K16509 - ko00000 ArsC family
PMDBBNKE_02479 4.29e-173 - - - K ko:K07707 ko02020,ko02024,map02020,map02024 ko00000,ko00001,ko00002,ko02022 LytTr DNA-binding domain
PMDBBNKE_02480 3.78e-212 blpH 2.7.13.3 - T ko:K07706 ko02020,ko02024,map02020,map02024 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 GHKL domain
PMDBBNKE_02481 9.62e-19 - - - - - - - -
PMDBBNKE_02482 6.12e-85 - - - KOT ko:K07813 ko02020,ko02024,map02020,map02024 ko00000,ko00001,ko01002 May be involved in the proteolytic processing of a quorum sensing system signal molecule precursor
PMDBBNKE_02483 0.0 clpL - - O ko:K04086 - ko00000,ko03110 C-terminal, D2-small domain, of ClpB protein
PMDBBNKE_02485 1.97e-256 lctO 1.13.12.4 - C ko:K00467,ko:K10530 ko00620,map00620 ko00000,ko00001,ko01000 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases
PMDBBNKE_02486 0.0 pox4 1.2.3.3 - EH ko:K00158 ko00620,ko01100,map00620,map01100 ko00000,ko00001,ko01000 Belongs to the TPP enzyme family
PMDBBNKE_02487 5.03e-95 - - - K - - - Transcriptional regulator
PMDBBNKE_02488 0.0 spxB 1.2.3.3 - EH ko:K00158 ko00620,ko01100,map00620,map01100 ko00000,ko00001,ko01000 Belongs to the TPP enzyme family
PMDBBNKE_02489 4.04e-94 yueI - - S - - - Protein of unknown function (DUF1694)
PMDBBNKE_02490 4.67e-108 - - - S - - - Membrane
PMDBBNKE_02491 1.59e-40 - - - S - - - Membrane
PMDBBNKE_02492 1.31e-210 rhaD 4.1.2.19 - H ko:K01629 ko00040,ko00051,ko01120,map00040,map00051,map01120 ko00000,ko00001,ko01000 Catalyzes the reversible cleavage of L-rhamnulose-1- phosphate to dihydroxyacetone phosphate (DHAP) and L-lactaldehyde
PMDBBNKE_02493 0.0 rhaA 2.7.1.5, 5.3.1.14 - G ko:K00848,ko:K01813 ko00040,ko00051,ko01120,map00040,map00051,map01120 ko00000,ko00001,ko01000 L-rhamnose isomerase (RhaA)
PMDBBNKE_02494 4.22e-74 rhaM 5.1.3.32 - G ko:K03534 - ko00000,ko01000 Involved in the anomeric conversion of L-rhamnose
PMDBBNKE_02495 0.0 rhaB 2.7.1.5 - F ko:K00848 ko00040,ko00051,ko01120,map00040,map00051,map01120 ko00000,ko00001,ko01000 Involved in the catabolism of L-rhamnose (6-deoxy-L- mannose). Catalyzes the transfer of the gamma-phosphate group from ATP to the 1-hydroxyl group of L-rhamnulose to yield L-rhamnulose 1-phosphate
PMDBBNKE_02496 4.67e-314 iolF - - P ko:K06610 - ko00000,ko02000 Sugar (and other) transporter
PMDBBNKE_02497 8.35e-230 rhaR - - K - - - helix_turn_helix, arabinose operon control protein
PMDBBNKE_02498 1.05e-179 - - - K - - - DeoR C terminal sensor domain
PMDBBNKE_02499 1.46e-60 tnpA1 - - L - - - PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
PMDBBNKE_02500 2.72e-126 tnpA1 - - L - - - PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
PMDBBNKE_02501 5.83e-182 - - - L - - - COG3547 Transposase and inactivated derivatives
PMDBBNKE_02502 0.0 eriC - - P ko:K03281 - ko00000 chloride
PMDBBNKE_02503 7.81e-247 napA - - P - - - Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
PMDBBNKE_02504 6.32e-99 - - - L - - - Transposase DDE domain
PMDBBNKE_02505 3.33e-89 - - - L - - - Putative transposase of IS4/5 family (DUF4096)
PMDBBNKE_02506 5.26e-205 XK27_10395 - - S - - - Uncharacterised 5xTM membrane BCR, YitT family COG1284
PMDBBNKE_02507 2.51e-137 - - - L - - - Resolvase, N terminal domain
PMDBBNKE_02508 1.74e-144 - - - L ko:K07497 - ko00000 hmm pf00665
PMDBBNKE_02509 2.7e-231 - 1.17.4.1 - F ko:K00526 ko00230,ko00240,ko01100,map00230,map00240,map01100 ko00000,ko00001,ko00002,ko01000,ko03400 Ribonucleotide reductase, small chain
PMDBBNKE_02510 1.13e-219 nrdF 1.17.4.1 - F ko:K00526 ko00230,ko00240,ko01100,map00230,map00240,map01100 ko00000,ko00001,ko00002,ko01000,ko03400 Ribonucleotide reductase, small chain
PMDBBNKE_02511 0.0 nrdE 1.17.4.1 - F ko:K00525 ko00230,ko00240,ko01100,map00230,map00240,map01100 ko00000,ko00001,ko00002,ko01000,ko03400 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PMDBBNKE_02512 7.07e-106 nrdI - - F ko:K03647 - ko00000 NrdI Flavodoxin like
PMDBBNKE_02513 1.98e-06 - 3.3.1.1 - H ko:K01251 ko00270,ko01100,map00270,map01100 ko00000,ko00001,ko00002,ko01000,ko01009,ko04147 adenosylhomocysteinase activity
PMDBBNKE_02514 8.65e-81 ypgQ - - S ko:K06950 - ko00000 Metal dependent phosphohydrolases with conserved 'HD' motif.
PMDBBNKE_02516 1.08e-208 - - - - - - - -
PMDBBNKE_02517 2.76e-28 - - - S - - - Cell surface protein
PMDBBNKE_02520 2.03e-12 - - - L - - - Helix-turn-helix domain
PMDBBNKE_02521 2.27e-13 - - - L - - - Helix-turn-helix domain
PMDBBNKE_02522 2.28e-22 - - - K - - - helix_turn_helix multiple antibiotic resistance protein
PMDBBNKE_02523 2.15e-17 - - - M - - - Domain of unknown function (DUF5011)
PMDBBNKE_02525 3.07e-06 - - - D - - - Mycoplasma protein of unknown function, DUF285
PMDBBNKE_02527 2.72e-70 - - - K - - - helix_turn_helix, arabinose operon control protein
PMDBBNKE_02529 2.12e-27 - - - L ko:K07487 - ko00000 Transposase
PMDBBNKE_02530 9.07e-22 - - - L ko:K07487 - ko00000 Transposase
PMDBBNKE_02531 2.01e-80 - - - M - - - Domain of unknown function (DUF5011)
PMDBBNKE_02532 9.95e-122 - - - M - - - Glycosyl hydrolases family 25
PMDBBNKE_02533 3.95e-92 polYB 2.7.7.7 - L ko:K02346,ko:K03502 - ko00000,ko01000,ko03400 Belongs to the DNA polymerase type-Y family
PMDBBNKE_02534 0.0 bgl 3.2.1.21, 3.2.1.86 GT1 G ko:K01223,ko:K05350 ko00010,ko00460,ko00500,ko00940,ko01100,ko01110,map00010,map00460,map00500,map00940,map01100,map01110 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 1 family
PMDBBNKE_02535 4.02e-205 ypbG 2.7.1.2 - GK ko:K00845 ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 ROK family
PMDBBNKE_02536 0.0 - 2.3.1.204, 3.2.1.170, 3.2.1.24 GH38 G ko:K01191,ko:K15524,ko:K16869 ko00511,map00511 ko00000,ko00001,ko01000,ko04131 Glycosyl hydrolases family 38 N-terminal domain
PMDBBNKE_02537 0.0 - - - S ko:K09704 - ko00000 Metal-independent alpha-mannosidase (GH125)
PMDBBNKE_02538 1.54e-247 - - - K - - - Transcriptional regulator
PMDBBNKE_02539 0.0 ypdD - - G - - - Glycosyl hydrolase family 92
PMDBBNKE_02540 1.81e-274 msmX - - P ko:K10112 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Belongs to the ABC transporter superfamily
PMDBBNKE_02541 3.76e-212 scrK 2.7.1.4 - GK ko:K00847 ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100 ko00000,ko00001,ko01000 ROK family
PMDBBNKE_02542 0.0 - - - K ko:K07720 ko02020,map02020 ko00000,ko00001,ko00002,ko02022 helix_turn_helix, arabinose operon control protein
PMDBBNKE_02543 0.0 - 2.7.13.3 - T ko:K07718 ko02020,map02020 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Histidine kinase
PMDBBNKE_02544 1.71e-139 ypcB - - S - - - integral membrane protein
PMDBBNKE_02545 0.0 dexB 3.2.1.70 - G ko:K01215 - ko00000,ko01000 Alpha amylase, catalytic domain protein
PMDBBNKE_02546 0.0 ypcG - - G ko:K17318 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Domain of unknown function (DUF3502)
PMDBBNKE_02547 4.37e-211 lplC - - U ko:K17320 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
PMDBBNKE_02548 1.29e-231 ypdA - - U ko:K17319 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
PMDBBNKE_02549 0.0 - 3.2.1.52 GH20 G ko:K12373 ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142 ko00000,ko00001,ko00002,ko01000,ko03110 Glycosyl hydrolase family 20, catalytic domain
PMDBBNKE_02550 9.5e-200 - - - K - - - helix_turn_helix, arabinose operon control protein
PMDBBNKE_02551 0.0 mdlA2 - - V ko:K06147 - ko00000,ko02000 ABC transporter
PMDBBNKE_02552 0.0 yknV - - V ko:K06147,ko:K18890 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter
PMDBBNKE_02553 8.56e-247 - - - K - - - helix_turn_helix gluconate operon transcriptional repressor
PMDBBNKE_02554 1.91e-201 lrp - - QT - - - PucR C-terminal helix-turn-helix domain
PMDBBNKE_02555 6.96e-83 pts38A 2.7.1.198 - G ko:K02781 ko00051,ko02060,map00051,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system glucitol/sorbitol-specific IIA component
PMDBBNKE_02556 2.5e-234 srlE 2.7.1.198 - G ko:K02782,ko:K02783 ko00051,ko02060,map00051,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 Sorbitol phosphotransferase enzyme II N-terminus
PMDBBNKE_02557 1.23e-129 srlA - - G ko:K02783 ko00051,ko02060,map00051,map02060 ko00000,ko00001,ko00002,ko02000 PTS system enzyme II sorbitol-specific factor
PMDBBNKE_02558 3.33e-113 srlM1 - - K - - - Glucitol operon activator protein (GutM)
PMDBBNKE_02559 0.0 srlM - - GKT ko:K03491 - ko00000,ko03000 Mga helix-turn-helix domain
PMDBBNKE_02560 2.21e-185 srlD2 1.1.1.140 - IQ ko:K00068 ko00051,map00051 ko00000,ko00001,ko01000 NAD dependent epimerase/dehydratase family
PMDBBNKE_02561 2.53e-209 rbsU - - U ko:K06216 - ko00000,ko02000 ribose uptake protein RbsU
PMDBBNKE_02562 4.99e-88 rbsD 5.4.99.62 - G ko:K06726 ko02010,map02010 ko00000,ko00001,ko01000 Catalyzes the interconversion of beta-pyran and beta- furan forms of D-ribose
PMDBBNKE_02563 7.82e-210 rbsK 2.7.1.15 - H ko:K00852 ko00030,map00030 ko00000,ko00001,ko01000 Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PMDBBNKE_02564 4.04e-241 rbsR - - K ko:K02529,ko:K03484 - ko00000,ko03000 helix_turn _helix lactose operon repressor
PMDBBNKE_02565 0.0 adhE 1.1.1.1, 1.2.1.10 - C ko:K04072 ko00010,ko00071,ko00350,ko00620,ko00625,ko00626,ko00650,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00620,map00625,map00626,map00650,map01100,map01110,map01120,map01130,map01220 ko00000,ko00001,ko01000 belongs to the iron- containing alcohol dehydrogenase family
PMDBBNKE_02566 2.51e-103 - - - T - - - Universal stress protein family
PMDBBNKE_02567 7.43e-130 padR - - K - - - Virulence activator alpha C-term
PMDBBNKE_02568 2.71e-135 padC - - Q ko:K13727 - ko00000,ko01000 Phenolic acid decarboxylase
PMDBBNKE_02569 1.44e-185 mhpD - - Q ko:K02509 ko00350,ko01120,map00350,map01120 ko00000,ko00001,ko01000 hydratase
PMDBBNKE_02570 3.66e-113 - - - K - - - Acetyltransferase (GNAT) domain
PMDBBNKE_02571 3.3e-202 degV1 - - S - - - DegV family
PMDBBNKE_02572 1.67e-79 - - - K - - - Bacteriophage CI repressor helix-turn-helix domain
PMDBBNKE_02573 0.0 pepE 3.4.22.40 - E ko:K01372 - ko00000,ko01000,ko01002 aminopeptidase
PMDBBNKE_02575 2.76e-141 sip3 3.4.21.89 - U ko:K03100 ko02024,ko03060,map02024,map03060 ko00000,ko00001,ko01000,ko01002 Belongs to the peptidase S26 family
PMDBBNKE_02576 0.0 - - - - - - - -
PMDBBNKE_02578 2.23e-211 - - - S - - - Bacterial protein of unknown function (DUF916)
PMDBBNKE_02579 1.31e-143 - - - S - - - Cell surface protein
PMDBBNKE_02580 0.0 gidA - - D ko:K03495 - ko00000,ko03016,ko03036 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
PMDBBNKE_02581 0.0 mnmE - - S ko:K03650 - ko00000,ko01000,ko03016 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
PMDBBNKE_02582 2.37e-173 jag - - S ko:K06346 - ko00000 R3H domain protein
PMDBBNKE_02583 2.26e-306 - - - Q - - - Imidazolonepropionase and related amidohydrolases
PMDBBNKE_02584 0.0 oppA - - E ko:K02035,ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter, substratebinding protein
PMDBBNKE_02585 1.55e-158 yidC - - U ko:K03217 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044,ko03029 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PMDBBNKE_02586 3.74e-75 rnpA 3.1.26.5 - J ko:K03536 - ko00000,ko01000,ko03016 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
PMDBBNKE_02587 0.0 dnaA - - L ko:K02313 ko02020,ko04112,map02020,map04112 ko00000,ko00001,ko03032,ko03036 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
PMDBBNKE_02588 8.19e-267 dnaN 2.7.7.7 - L ko:K02338 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
PMDBBNKE_02589 3.82e-51 yaaA - - S ko:K14761 - ko00000,ko03009 S4 domain protein YaaA
PMDBBNKE_02590 7.24e-263 recF - - L ko:K03629 ko03440,map03440 ko00000,ko00001,ko03400 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
PMDBBNKE_02591 0.0 gyrB 5.99.1.3 - L ko:K02470 - ko00000,ko01000,ko03032,ko03400 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PMDBBNKE_02592 0.0 gyrA 5.99.1.3 - L ko:K02469 - ko00000,ko01000,ko03032,ko03400 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PMDBBNKE_02593 5.95e-65 rpsF - - J ko:K02990 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011,ko03029 Binds together with S18 to 16S ribosomal RNA
PMDBBNKE_02594 1.68e-108 ssb - - L ko:K03111 ko03030,ko03430,ko03440,map03030,map03430,map03440 ko00000,ko00001,ko03029,ko03032,ko03400 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
PMDBBNKE_02595 2.69e-47 rpsR - - J ko:K02963 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
PMDBBNKE_02596 0.0 yybT - - T - - - signaling protein consisting of a modified GGDEF domain and a DHH domain
PMDBBNKE_02597 3.44e-95 rplI - - J ko:K02939 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds to the 23S rRNA
PMDBBNKE_02598 8.77e-317 dnaB 3.6.4.12 - L ko:K02314 ko03030,ko04112,map03030,map04112 ko00000,ko00001,ko01000,ko03032 Participates in initiation and elongation during chromosome replication
PMDBBNKE_02599 2.02e-288 yttB - - EGP - - - Major Facilitator
PMDBBNKE_02600 9e-184 proB 2.7.2.11 - F ko:K00931 ko00330,ko00332,ko01100,ko01130,ko01230,map00330,map00332,map01100,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
PMDBBNKE_02601 3.25e-292 proA 1.2.1.41 - E ko:K00147 ko00330,ko00332,ko01100,ko01110,ko01130,ko01230,map00330,map00332,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
PMDBBNKE_02602 0.0 oppA - - E ko:K02035,ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter, substratebinding protein
PMDBBNKE_02604 0.0 glgB 2.4.1.18 CBM48,GH13 G ko:K00700 ko00500,ko01100,ko01110,map00500,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko04147 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
PMDBBNKE_02605 6.65e-282 glgC 2.7.7.27 - H ko:K00975 ko00500,ko00520,ko01100,ko01110,ko02026,map00500,map00520,map01100,map01110,map02026 ko00000,ko00001,ko00002,ko01000 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
PMDBBNKE_02606 3.49e-269 glgD 2.7.7.27 - G ko:K00975 ko00500,ko00520,ko01100,ko01110,ko02026,map00500,map00520,map01100,map01110,map02026 ko00000,ko00001,ko00002,ko01000 Nucleotidyl transferase
PMDBBNKE_02607 0.0 glgA 2.4.1.21 GT5 F ko:K00703 ko00500,ko01100,ko01110,ko02026,map00500,map01100,map01110,map02026 ko00000,ko00001,ko00002,ko01000,ko01003 Synthesizes alpha-1,4-glucan chains using ADP-glucose
PMDBBNKE_02608 0.0 glgP 2.4.1.1 GT35 G ko:K00688 ko00500,ko01100,ko01110,ko02026,ko04217,ko04910,ko04922,ko04931,map00500,map01100,map01110,map02026,map04217,map04910,map04922,map04931 ko00000,ko00001,ko01000 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
PMDBBNKE_02609 0.0 malZ 3.2.1.20, 3.2.1.41 CBM48,GH13,GH31 G ko:K01187,ko:K01200 ko00052,ko00500,ko01100,ko01110,map00052,map00500,map01100,map01110 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 13 family
PMDBBNKE_02611 8.38e-184 - - - S - - - haloacid dehalogenase-like hydrolase
PMDBBNKE_02612 1.1e-154 pgmB 5.4.2.6 - S ko:K01838 ko00500,map00500 ko00000,ko00001,ko01000 beta-phosphoglucomutase
PMDBBNKE_02613 0.0 trePP 2.4.1.216, 2.4.1.8 GH65 G ko:K00691,ko:K03731 ko00500,ko01100,map00500,map01100 ko00000,ko00001,ko01000 Glycosyl hydrolase family 65 central catalytic domain
PMDBBNKE_02614 3.21e-104 - - - S - - - Pyridoxamine 5'-phosphate oxidase
PMDBBNKE_02615 4.37e-43 cspL - - K ko:K03704 - ko00000,ko03000 Cold shock protein domain
PMDBBNKE_02616 2.54e-50 - - - - - - - -
PMDBBNKE_02618 2.22e-169 yycF - - K ko:K07668 ko02020,map02020 ko00000,ko00001,ko00002,ko02022 response regulator
PMDBBNKE_02619 0.0 vicK 2.7.13.3 - T ko:K07652 ko02020,map02020 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Histidine kinase
PMDBBNKE_02620 5.04e-313 yycH - - S - - - YycH protein
PMDBBNKE_02621 3.54e-195 yycI - - S - - - YycH protein
PMDBBNKE_02622 1.71e-200 vicX 3.1.26.11 - S ko:K00784 ko03013,map03013 ko00000,ko00001,ko01000,ko03016 domain protein
PMDBBNKE_02623 1.5e-253 htrA 3.4.21.107 - O ko:K04771 ko01503,ko02020,map01503,map02020 ko00000,ko00001,ko00002,ko01000,ko01002,ko03110 serine protease
PMDBBNKE_02624 6.08e-107 rlmH 2.1.1.177 - J ko:K00783 - ko00000,ko01000,ko03009 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
PMDBBNKE_02625 2e-123 - - - K - - - Bacterial regulatory proteins, tetR family
PMDBBNKE_02626 3.39e-39 - - - C - - - Belongs to the aldehyde dehydrogenase family
PMDBBNKE_02627 6.64e-95 - - - - - - - -
PMDBBNKE_02629 1.07e-293 traK - - U ko:K03205 ko03070,map03070 ko00000,ko00001,ko00002,ko02044 TraM recognition site of TraD and TraG
PMDBBNKE_02630 2.24e-86 - - - - - - - -
PMDBBNKE_02631 9.67e-59 - - - CO - - - COG0526, thiol-disulfide isomerase and thioredoxins
PMDBBNKE_02632 2.17e-76 - - - - - - - -
PMDBBNKE_02633 7.88e-209 - - - M - - - CHAP domain
PMDBBNKE_02634 0.0 - - - S - - - WXG100 protein secretion system (Wss), protein YukC
PMDBBNKE_02635 0.0 traE - - U - - - Psort location Cytoplasmic, score
PMDBBNKE_02636 4.48e-152 - - - - - - - -
PMDBBNKE_02637 8.94e-70 - - - - - - - -
PMDBBNKE_02638 4.45e-66 - - - S - - - Cag pathogenicity island, type IV secretory system
PMDBBNKE_02639 1.02e-104 - - - - - - - -
PMDBBNKE_02641 0.0 traA - - L - - - MobA MobL family protein
PMDBBNKE_02642 1.98e-36 - - - - - - - -
PMDBBNKE_02643 2.85e-53 - - - - - - - -
PMDBBNKE_02644 4.92e-109 - - - - - - - -
PMDBBNKE_02645 2.83e-58 - - - L - - - Addiction module antitoxin, RelB DinJ family
PMDBBNKE_02646 5.36e-105 repA - - S - - - Replication initiator protein A
PMDBBNKE_02647 2.4e-60 repA - - S - - - Replication initiator protein A
PMDBBNKE_02648 0.0 cycA - - E ko:K03293,ko:K11737 - ko00000,ko02000 Amino acid permease
PMDBBNKE_02649 6.22e-26 - - - - - - - -
PMDBBNKE_02650 5.3e-49 - - - L - - - DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
PMDBBNKE_02651 2.39e-184 soj - - D - - - CobQ CobB MinD ParA nucleotide binding domain protein
PMDBBNKE_02653 1.76e-45 - - - L - - - Transposase and inactivated derivatives, IS30 family
PMDBBNKE_02655 8.37e-161 tnp1216 - - L ko:K07498 - ko00000 DDE domain
PMDBBNKE_02656 1.56e-120 nadC2 6.3.4.21 - F ko:K00763 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko01000 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
PMDBBNKE_02657 8.84e-210 traI 5.99.1.2 - L ko:K03169 - ko00000,ko01000,ko03032 This gene contains a nucleotide ambiguity which may be the result of a sequencing error
PMDBBNKE_02658 0.0 - - - L - - - MobA MobL family protein
PMDBBNKE_02659 3.41e-37 - - - - - - - -
PMDBBNKE_02660 5.98e-55 - - - - - - - -
PMDBBNKE_02661 3.33e-107 - - - - - - - -
PMDBBNKE_02662 2.83e-58 - - - L ko:K07473 - ko00000,ko02048 Addiction module antitoxin, RelB DinJ family
PMDBBNKE_02664 6.13e-127 soj - - D - - - CobQ CobB MinD ParA nucleotide binding domain protein
PMDBBNKE_02666 1.96e-225 - - - L - - - Transposase and inactivated derivatives, IS30 family
PMDBBNKE_02667 1.16e-239 - - - L - - - PFAM Integrase catalytic region
PMDBBNKE_02668 9.17e-126 gbuC - - E ko:K02001,ko:K02002 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 glycine betaine
PMDBBNKE_02669 1.14e-143 gbuB - - E ko:K02001 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 glycine betaine
PMDBBNKE_02670 2.97e-234 gbuA 3.6.3.32 - E ko:K02000 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 glycine betaine
PMDBBNKE_02671 1.71e-240 - - - L ko:K07482 - ko00000 Helix-turn-helix domain
PMDBBNKE_02672 4.63e-123 - - - L - - - Resolvase, N terminal domain
PMDBBNKE_02673 9.03e-75 - - - K - - - helix_turn_helix multiple antibiotic resistance protein
PMDBBNKE_02674 0.0 kup - - P ko:K03549 - ko00000,ko02000 Transport of potassium into the cell
PMDBBNKE_02675 4.49e-82 kdpE - - KT ko:K02483,ko:K07667 ko02020,ko02024,map02020,map02024 ko00000,ko00001,ko00002,ko02022 Transcriptional regulatory protein, C terminal
PMDBBNKE_02676 1.95e-222 kdpD 2.7.13.3 - T ko:K07646 ko02020,map02020 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Histidine kinase
PMDBBNKE_02677 2.47e-44 kdpC 3.6.3.12 - P ko:K01548 ko02020,map02020 ko00000,ko00001,ko01000 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
PMDBBNKE_02678 0.0 kdpB 3.6.3.12 - P ko:K01547 ko02020,map02020 ko00000,ko00001,ko01000 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
PMDBBNKE_02679 3.63e-217 kdpA - - P - - - Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
PMDBBNKE_02681 1.41e-32 - - - T - - - Pfam Adenylate and Guanylate cyclase catalytic domain
PMDBBNKE_02683 0.0 polYB 2.7.7.7 - L ko:K02346,ko:K03502 - ko00000,ko01000,ko03400 Belongs to the DNA polymerase type-Y family
PMDBBNKE_02684 1.35e-71 - - - - - - - -
PMDBBNKE_02685 4.8e-86 - - - - - - - -
PMDBBNKE_02686 1.16e-11 - - - S - - - Protein of unknown function (DUF3800)
PMDBBNKE_02687 1.75e-158 - - - L - - - Psort location Cytoplasmic, score
PMDBBNKE_02688 8.48e-88 gcsH1 - - E ko:K02437 ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200 ko00000,ko00001,ko00002 Glycine cleavage H-protein
PMDBBNKE_02689 7.42e-228 - - - - - - - -
PMDBBNKE_02690 6.88e-170 - - - - - - - -
PMDBBNKE_02691 0.0 uvrB3 3.1.12.1 - KL ko:K07464 - ko00000,ko01000,ko02048 DEAD_2
PMDBBNKE_02692 2.03e-75 - - - - - - - -
PMDBBNKE_02693 5.31e-284 ackA 2.7.2.1 - F ko:K00925 ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PMDBBNKE_02694 8.89e-101 - - - S ko:K02348 - ko00000 GNAT family
PMDBBNKE_02695 1.24e-99 - - - K - - - Transcriptional regulator
PMDBBNKE_02696 1.17e-288 yumB 1.6.99.3 - C ko:K03885 ko00190,map00190 ko00000,ko00001,ko01000 NADH dehydrogenase
PMDBBNKE_02697 9.97e-50 - - - - - - - -
PMDBBNKE_02699 1.04e-35 - - - - - - - -
PMDBBNKE_02700 9.25e-32 - - - U - - - Preprotein translocase subunit SecB
PMDBBNKE_02701 5.3e-265 potD - - P ko:K11069 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter
PMDBBNKE_02702 5.58e-181 potC - - P ko:K11070 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter permease
PMDBBNKE_02703 9e-190 potB - - P ko:K11071 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter permease
PMDBBNKE_02704 1.46e-262 potA 3.6.3.30, 3.6.3.31 - P ko:K02010,ko:K11072 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
PMDBBNKE_02705 1.5e-124 - - - K - - - Cupin domain
PMDBBNKE_02706 8.08e-110 - - - S - - - ASCH
PMDBBNKE_02707 1.88e-111 - - - K - - - GNAT family
PMDBBNKE_02708 2.05e-115 - - - K - - - acetyltransferase
PMDBBNKE_02709 2.06e-30 - - - - - - - -
PMDBBNKE_02710 5.05e-79 - - - K ko:K07979 - ko00000,ko03000 helix_turn_helix gluconate operon transcriptional repressor
PMDBBNKE_02711 1.85e-208 - - - V ko:K01990,ko:K16921 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter
PMDBBNKE_02712 3.6e-242 - - - - - - - -
PMDBBNKE_02713 0.0 acdH 1.1.1.1, 1.2.1.10, 1.2.1.87 - C ko:K04072,ko:K13922 ko00010,ko00071,ko00350,ko00620,ko00625,ko00626,ko00640,ko00650,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00620,map00625,map00626,map00640,map00650,map01100,map01110,map01120,map01130,map01220 ko00000,ko00001,ko01000 Aldehyde dehydrogenase family
PMDBBNKE_02714 8.16e-207 fba 4.1.2.13, 4.1.2.29 - G ko:K01624,ko:K03339 ko00010,ko00030,ko00051,ko00562,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00562,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Fructose-1,6-bisphosphate aldolase, class II
PMDBBNKE_02715 0.0 ybeC - - E - - - amino acid
PMDBBNKE_02716 1.17e-245 - - - L - - - Transposase and inactivated derivatives, IS30 family
PMDBBNKE_02717 3.89e-132 tnpR - - L - - - Resolvase, N terminal domain
PMDBBNKE_02718 3.65e-52 - - - - - - - -
PMDBBNKE_02719 0.0 yeeA - - V - - - Type II restriction enzyme, methylase subunits
PMDBBNKE_02720 1.72e-54 - - - K - - - Helix-turn-helix domain
PMDBBNKE_02721 1.89e-84 - - - S - - - Phage derived protein Gp49-like (DUF891)
PMDBBNKE_02723 1.32e-17 ribH 2.5.1.78 - H ko:K00794 ko00740,ko01100,ko01110,map00740,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin
PMDBBNKE_02724 1.32e-222 ribBA 3.5.4.25, 4.1.99.12 - H ko:K14652 ko00740,ko00790,ko01100,ko01110,map00740,map00790,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate
PMDBBNKE_02725 6.3e-89 - - - L ko:K07484 - ko00000 Transposase IS66 family
PMDBBNKE_02726 1.51e-179 - - - K ko:K09705 - ko00000 NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
PMDBBNKE_02727 1.25e-129 - - - K - - - COG COG0846 NAD-dependent protein deacetylases, SIR2 family
PMDBBNKE_02728 3.42e-203 - - - L - - - Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
PMDBBNKE_02729 2.54e-79 - - - K - - - Bacterial regulatory proteins, tetR family
PMDBBNKE_02730 3.77e-98 - - - L ko:K07497 - ko00000 PFAM Integrase catalytic region
PMDBBNKE_02731 9.63e-163 - - - L - - - Psort location Cytoplasmic, score
PMDBBNKE_02735 1.52e-39 - - - S - - - Phage terminase, small subunit
PMDBBNKE_02736 1.38e-313 terL - - S - - - overlaps another CDS with the same product name
PMDBBNKE_02738 2.31e-141 - - - S - - - Phage portal protein
PMDBBNKE_02739 6.18e-233 - - - S ko:K06904 - ko00000 Phage capsid family
PMDBBNKE_02741 5.25e-21 - - - - - - - -
PMDBBNKE_02744 5.44e-12 - - - K - - - transcriptional
PMDBBNKE_02747 5.78e-18 - - - S - - - Short C-terminal domain
PMDBBNKE_02748 4.78e-27 - - - S - - - Short C-terminal domain
PMDBBNKE_02750 3.87e-124 - - - S - - - KilA-N domain
PMDBBNKE_02752 1.89e-114 - - - L - - - Belongs to the 'phage' integrase family
PMDBBNKE_02753 1.35e-55 - - - S - - - COG NOG38524 non supervised orthologous group
PMDBBNKE_02754 4.68e-91 - - - L - - - Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
PMDBBNKE_02755 2.36e-305 xylP1 - - G - - - MFS/sugar transport protein
PMDBBNKE_02756 1.43e-170 hflC - - O ko:K04087 - ko00000,ko00002,ko01000 prohibitin homologues
PMDBBNKE_02757 2.97e-41 - - - - - - - -
PMDBBNKE_02758 0.0 pepD2 - - E ko:K08659 - ko00000,ko01000,ko01002 Dipeptidase
PMDBBNKE_02759 6.4e-54 - - - - - - - -
PMDBBNKE_02760 1.54e-123 bioY - - S ko:K03523 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 BioY family
PMDBBNKE_02761 7.1e-226 birA 6.3.4.15 - H ko:K03524 ko00780,ko01100,map00780,map01100 ko00000,ko00001,ko01000,ko03000 Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
PMDBBNKE_02762 6.71e-80 - - - S - - - CHY zinc finger
PMDBBNKE_02763 2.21e-284 mtnE - - E ko:K08969 ko00270,ko01100,map00270,map01100 ko00000,ko00001,ko00002,ko01000,ko01007 Aminotransferase
PMDBBNKE_02764 1.1e-280 - - - - - - - -
PMDBBNKE_02765 8.13e-199 tagG - - U ko:K09692 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Transport permease protein
PMDBBNKE_02766 9.42e-258 tagH 3.6.3.40 - GM ko:K09693 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 Part of the ABC transporter complex TagGH involved in teichoic acids export. Responsible for energy coupling to the transport system
PMDBBNKE_02767 2.76e-59 - - - - - - - -
PMDBBNKE_02768 2.39e-121 - - - K - - - Transcriptional regulator PadR-like family
PMDBBNKE_02769 0.0 - - - P - - - Major Facilitator Superfamily
PMDBBNKE_02770 1.05e-308 amt - - P ko:K03320 - ko00000,ko02000 ammonium transporter
PMDBBNKE_02771 6.6e-229 hicD1 1.1.1.27 - C ko:K00016 ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922 ko00000,ko00001,ko01000,ko04147 Belongs to the LDH MDH superfamily
PMDBBNKE_02772 8.95e-60 - - - - - - - -
PMDBBNKE_02773 1.05e-132 zmp1 - - O - - - Zinc-dependent metalloprotease
PMDBBNKE_02774 6.87e-153 rpiA2 5.3.1.6 - G ko:K01807 ko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
PMDBBNKE_02775 0.0 sufI - - Q - - - Multicopper oxidase
PMDBBNKE_02776 1.08e-71 - - - S ko:K08987 - ko00000 Protein of unknown function (DUF1304)
PMDBBNKE_02777 1.31e-124 yxkA - - S ko:K06910 - ko00000 Phosphatidylethanolamine-binding protein
PMDBBNKE_02778 3.25e-294 - - - N ko:K09384 - ko00000 Uncharacterized conserved protein (DUF2075)
PMDBBNKE_02779 5.89e-108 - - - K - - - Winged helix-turn-helix transcription repressor, HrcA DNA-binding
PMDBBNKE_02780 2.16e-103 - - - - - - - -
PMDBBNKE_02781 4.9e-103 accB3 - - I ko:K02160 ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212 ko00000,ko00001,ko00002 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
PMDBBNKE_02782 6.07e-223 rihA 3.2.2.1 - F ko:K01239,ko:K01250,ko:K12700 ko00230,ko00760,ko01100,map00230,map00760,map01100 ko00000,ko00001,ko01000 Nucleoside
PMDBBNKE_02783 1.03e-207 yneD - - S - - - Belongs to the short-chain dehydrogenases reductases (SDR) family
PMDBBNKE_02784 0.0 proWX - - EM ko:K05845,ko:K05846 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Periplasmic glycine betaine choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)
PMDBBNKE_02785 2.7e-230 proV - - E ko:K05847 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter, ATP-binding protein
PMDBBNKE_02786 0.0 gshR 1.8.1.7 - C ko:K00383 ko00480,ko04918,map00480,map04918 ko00000,ko00001,ko01000 Glutathione reductase
PMDBBNKE_02787 0.0 glpK 2.7.1.30 - F ko:K00864 ko00561,ko01100,ko03320,ko04626,map00561,map01100,map03320,map04626 ko00000,ko00001,ko01000,ko04147 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
PMDBBNKE_02788 0.0 glpD 1.1.3.21, 1.1.5.3 - C ko:K00105,ko:K00111 ko00564,ko01110,map00564,map01110 ko00000,ko00001,ko01000 C-terminal domain of alpha-glycerophosphate oxidase
PMDBBNKE_02789 2.5e-173 glpF - - U ko:K02440 - ko00000,ko02000 Belongs to the MIP aquaporin (TC 1.A.8) family
PMDBBNKE_02790 0.0 - - - M - - - domain protein
PMDBBNKE_02791 2.11e-76 - - - M - - - dTDP-4-dehydrorhamnose reductase activity
PMDBBNKE_02792 7.12e-226 - - - - - - - -
PMDBBNKE_02793 6.97e-45 - - - - - - - -
PMDBBNKE_02794 2.35e-52 - - - - - - - -
PMDBBNKE_02795 2.59e-84 - - - - - - - -
PMDBBNKE_02796 4.92e-90 - - - S - - - Immunity protein 63
PMDBBNKE_02797 5.32e-51 - - - - - - - -
PMDBBNKE_02798 9.2e-154 lacA 2.3.1.18, 2.3.1.79 - S ko:K00633,ko:K00661 - ko00000,ko01000 Maltose acetyltransferase
PMDBBNKE_02799 7.81e-263 - - - EGP - - - Transporter, major facilitator family protein
PMDBBNKE_02800 4.15e-188 - 3.1.3.102, 3.1.3.104, 3.1.3.23 - G ko:K07757,ko:K20861 ko00740,ko01100,ko01110,map00740,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Sucrose-6F-phosphate phosphohydrolase
PMDBBNKE_02801 2.35e-212 - - - K - - - Transcriptional regulator
PMDBBNKE_02802 8.38e-192 - - - S - - - hydrolase
PMDBBNKE_02803 0.0 brnQ - - U ko:K03311 - ko00000 Component of the transport system for branched-chain amino acids
PMDBBNKE_02804 8.8e-265 napA - - P - - - Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
PMDBBNKE_02806 1.15e-43 - - - - - - - -
PMDBBNKE_02807 6.24e-25 plnR - - - - - - -
PMDBBNKE_02808 9.76e-153 - - - - - - - -
PMDBBNKE_02809 3.29e-32 plnK - - - - - - -
PMDBBNKE_02810 8.53e-34 plnJ - - - - - - -
PMDBBNKE_02811 4.08e-39 - - - - - - - -
PMDBBNKE_02813 5.58e-291 - - - M - - - Glycosyl transferase family 2
PMDBBNKE_02814 2.08e-160 plnP - - S - - - CAAX protease self-immunity
PMDBBNKE_02815 1.22e-36 - - - - - - - -
PMDBBNKE_02816 1.57e-24 plnA - - - - - - -
PMDBBNKE_02817 2.08e-301 plnB 2.7.13.3 - T ko:K07706 ko02020,ko02024,map02020,map02024 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 GHKL domain
PMDBBNKE_02818 2.48e-172 sppR - - K ko:K07707 ko02020,ko02024,map02020,map02024 ko00000,ko00001,ko00002,ko02022 LytTr DNA-binding domain
PMDBBNKE_02819 1.05e-173 plnD - - K ko:K07707 ko02020,ko02024,map02020,map02024 ko00000,ko00001,ko00002,ko02022 LytTr DNA-binding domain
PMDBBNKE_02820 8.15e-167 - - - S ko:K07052 - ko00000 CAAX protease self-immunity
PMDBBNKE_02821 1.93e-31 plnF - - - - - - -
PMDBBNKE_02822 8.82e-32 - - - - - - - -
PMDBBNKE_02823 0.0 comA - - V ko:K06147,ko:K06148,ko:K12292,ko:K20344 ko02010,ko02020,ko02024,map02010,map02020,map02024 ko00000,ko00001,ko01000,ko02000 ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
PMDBBNKE_02824 1.49e-309 mesE - - M ko:K12293,ko:K20345 ko02020,ko02024,map02020,map02024 ko00000,ko00001,ko02000 Transport protein ComB
PMDBBNKE_02825 3.81e-123 - - - S ko:K07052 - ko00000 CAAX protease self-immunity
PMDBBNKE_02826 5.04e-155 plnU - - S ko:K07052 - ko00000 CAAX protease self-immunity
PMDBBNKE_02827 2.75e-145 - - - V ko:K07052 - ko00000 CAAX protease self-immunity
PMDBBNKE_02828 3.34e-147 - - - S ko:K07052 - ko00000 CAAX protease self-immunity
PMDBBNKE_02829 1.85e-40 - - - - - - - -
PMDBBNKE_02830 0.0 - - - L - - - DNA helicase
PMDBBNKE_02831 1.38e-179 mtnU 3.5.1.3 - S ko:K13566 ko00250,map00250 ko00000,ko00001,ko01000 Carbon-nitrogen hydrolase
PMDBBNKE_02832 8.19e-244 trpS 6.1.1.2 - J ko:K01867 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the class-I aminoacyl-tRNA synthetase family
PMDBBNKE_02833 2.69e-166 - - - K - - - UbiC transcription regulator-associated domain protein
PMDBBNKE_02834 0.0 chbC - - G ko:K02761 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko02000 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PMDBBNKE_02835 9.68e-34 - - - - - - - -
PMDBBNKE_02836 3.55e-99 - - - S - - - Domain of unknown function (DUF3284)
PMDBBNKE_02837 0.0 celB - - G ko:K02761 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko02000 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PMDBBNKE_02838 0.0 - 3.2.1.86 GT1 G ko:K01223 ko00010,ko00500,map00010,map00500 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 1 family
PMDBBNKE_02839 6.97e-209 - - - GK - - - ROK family
PMDBBNKE_02840 9.75e-175 yecA - - K - - - Helix-turn-helix domain, rpiR family
PMDBBNKE_02841 2.94e-244 dus - - J - - - Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PMDBBNKE_02842 1.23e-262 - - - - - - - -
PMDBBNKE_02843 5.08e-194 - - - S - - - Psort location Cytoplasmic, score
PMDBBNKE_02844 1.36e-214 ppx 3.6.1.11, 3.6.1.40 - FP ko:K01524 ko00230,map00230 ko00000,ko00001,ko01000 exopolyphosphatase
PMDBBNKE_02845 1.37e-290 mvaA 1.1.1.88, 2.3.1.9 - C ko:K00054,ko:K00626 ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the HMG-CoA reductase family
PMDBBNKE_02846 4.65e-229 - - - - - - - -
PMDBBNKE_02847 8.73e-171 cobB - - K ko:K12410 - ko00000,ko01000 SIR2 family
PMDBBNKE_02848 1.12e-205 yunF - - F - - - Protein of unknown function DUF72
PMDBBNKE_02849 4.64e-92 - - - F - - - DNA mismatch repair protein MutT
PMDBBNKE_02850 0.0 metG 6.1.1.10 - J ko:K01874 ko00450,ko00970,map00450,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
PMDBBNKE_02851 4.08e-270 - - - EGP ko:K02030 - ko00000,ko00002,ko02000 Drug resistance transporter Bcr CflA subfamily
PMDBBNKE_02852 1.63e-187 tatD - - L ko:K03424 - ko00000,ko01000 hydrolase, TatD family
PMDBBNKE_02853 3.1e-125 rnmV 3.1.26.8 - J ko:K05985 - ko00000,ko01000 Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
PMDBBNKE_02854 1.45e-202 ksgA 2.1.1.182 - J ko:K02528 - ko00000,ko01000,ko03009 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
PMDBBNKE_02855 6.87e-50 veg - - S - - - Biofilm formation stimulator VEG
PMDBBNKE_02856 2.26e-209 ispE 2.7.1.148 - F ko:K00919,ko:K16924 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000,ko02000 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
PMDBBNKE_02857 1.9e-230 - - - S ko:K06889 - ko00000 Prolyl oligopeptidase family
PMDBBNKE_02858 8.05e-166 adcC - - P ko:K02074,ko:K09817,ko:K11710 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ABC transporter
PMDBBNKE_02859 6.39e-169 znuB - - U ko:K02075,ko:K09816 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC 3 transport family
PMDBBNKE_02860 2.4e-56 - - - S - - - ankyrin repeats
PMDBBNKE_02861 5.3e-49 - - - - - - - -
PMDBBNKE_02862 1.96e-189 purR - - F ko:K09685 - ko00000,ko03000 pur operon repressor
PMDBBNKE_02863 3.28e-298 glmU 2.3.1.157, 2.7.7.23 - M ko:K04042 ko00520,ko01100,ko01130,map00520,map01100,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
PMDBBNKE_02864 1.1e-193 bla1 3.5.2.6 - V ko:K17836 ko00311,ko01130,ko01501,map00311,map01130,map01501 ko00000,ko00001,ko00002,ko01000,ko01504 Beta-lactamase enzyme family
PMDBBNKE_02865 3.26e-228 prs 2.7.6.1 - F ko:K00948 ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PMDBBNKE_02866 1.15e-235 - - - S - - - DUF218 domain
PMDBBNKE_02867 4.31e-179 - - - - - - - -
PMDBBNKE_02868 4.15e-191 yxeH - - S - - - hydrolase
PMDBBNKE_02869 0.0 ywfO - - S ko:K06885 - ko00000 HD domain protein
PMDBBNKE_02870 8.97e-200 lipL 2.3.1.200, 2.3.1.204 - H ko:K16869,ko:K18821 - ko00000,ko01000 biotin lipoate A B protein ligase
PMDBBNKE_02871 2.87e-101 ywiB - - S - - - Domain of unknown function (DUF1934)
PMDBBNKE_02872 2.96e-89 rpoE - - K ko:K03048 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 br01611,ko00000,ko00001,ko00002,ko03021,ko03400 Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
PMDBBNKE_02873 0.0 pyrG 6.3.4.2 - F ko:K01937 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
PMDBBNKE_02874 2.66e-308 serS 6.1.1.11 - J ko:K01875 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
PMDBBNKE_02875 1.32e-289 sdaC - - E ko:K03837 - ko00000,ko02000 amino acid
PMDBBNKE_02876 1.52e-158 sdhB 4.3.1.17 - E ko:K01752 ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230 ko00000,ko00001,ko01000 Serine dehydratase beta chain
PMDBBNKE_02877 8.05e-202 sdaAA 4.3.1.17 - E ko:K01752 ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230 ko00000,ko00001,ko01000 L-serine dehydratase, iron-sulfur-dependent, alpha subunit
PMDBBNKE_02878 6.59e-170 - - - S - - - YheO-like PAS domain
PMDBBNKE_02879 4.01e-36 - - - - - - - -
PMDBBNKE_02880 2.08e-302 murA 2.5.1.7 - M ko:K00790 ko00520,ko00550,ko01100,map00520,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PMDBBNKE_02881 6.26e-306 rho - - K ko:K03628 ko03018,map03018 ko00000,ko00001,ko03019,ko03021 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
PMDBBNKE_02882 1.91e-55 rpmE2 - - J ko:K02909 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal protein L31
PMDBBNKE_02883 1.05e-273 - - - J - - - translation release factor activity
PMDBBNKE_02884 3.14e-164 srtA 3.4.22.70 - M ko:K07284 - ko00000,ko01000,ko01002,ko01011 sortase family
PMDBBNKE_02885 5.35e-121 lemA - - S ko:K03744 - ko00000 LemA family
PMDBBNKE_02886 4.58e-194 htpX - - O ko:K03799 - ko00000,ko00002,ko01000,ko01002 Belongs to the peptidase M48B family
PMDBBNKE_02887 1.84e-189 - - - - - - - -
PMDBBNKE_02888 0.0 murF 6.3.2.10 - M ko:K01929 ko00300,ko00550,ko01100,ko01502,map00300,map00550,map01100,map01502 ko00000,ko00001,ko01000,ko01011 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
PMDBBNKE_02889 0.0 cshA 3.6.4.13 - F ko:K05592 ko03018,map03018 ko00000,ko00001,ko01000,ko03009,ko03019 DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
PMDBBNKE_02890 9.32e-81 acpS 2.7.8.7 - I ko:K00997 ko00770,map00770 ko00000,ko00001,ko01000 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
PMDBBNKE_02891 5e-275 alr 5.1.1.1 - E ko:K01775 ko00473,ko01100,ko01502,map00473,map01100,map01502 ko00000,ko00001,ko01000,ko01011 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
PMDBBNKE_02892 2.58e-85 ndoA - - L ko:K07171 - ko00000,ko01000,ko02048 Toxic component of a toxin-antitoxin (TA) module
PMDBBNKE_02893 0.0 kup - - P ko:K03549 - ko00000,ko02000 Transport of potassium into the cell
PMDBBNKE_02894 1.37e-248 - - - P ko:K02051 - ko00000,ko00002,ko02000 ABC transporter, substratebinding protein
PMDBBNKE_02895 1.06e-202 - - - U ko:K02050 - ko00000,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
PMDBBNKE_02896 2.02e-171 ytlC 3.6.3.36 - P ko:K02049,ko:K10831,ko:K15555 ko00920,ko02010,map00920,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ATPases associated with a variety of cellular activities
PMDBBNKE_02897 0.0 carB 6.3.5.5 - F ko:K01955 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Carbamoyl-phosphate synthase
PMDBBNKE_02898 3.7e-260 carA 6.3.5.5 - F ko:K01956 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Carbamoyl-phosphate synthetase glutamine chain
PMDBBNKE_02899 6.25e-245 argC 1.2.1.38 - E ko:K00145 ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
PMDBBNKE_02900 1.38e-293 argJ 2.3.1.1, 2.3.1.35 - E ko:K00620 ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
PMDBBNKE_02901 2.36e-166 argB 2.7.2.8 - F ko:K00930 ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the acetylglutamate kinase family. ArgB subfamily
PMDBBNKE_02902 1.9e-277 argD 2.6.1.11, 2.6.1.17 - E ko:K00821 ko00220,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00220,map00300,map01100,map01110,map01120,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 acetylornithine
PMDBBNKE_02903 2.16e-240 argF 2.1.3.3 - E ko:K00611 ko00220,ko01100,ko01110,ko01130,ko01230,map00220,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
PMDBBNKE_02904 5.3e-110 queT - - S - - - QueT transporter
PMDBBNKE_02905 5.29e-211 oppA - - E ko:K02035,ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 Bacterial extracellular solute-binding proteins, family 5 Middle
PMDBBNKE_02906 8.1e-157 pepL 3.4.11.5 - E ko:K01259 ko00330,map00330 ko00000,ko00001,ko01000,ko01002 Releases the N-terminal proline from various substrates
PMDBBNKE_02907 4.87e-148 - - - S - - - (CBS) domain
PMDBBNKE_02908 0.0 - - - S - - - Putative peptidoglycan binding domain
PMDBBNKE_02909 2.79e-226 ldh 1.1.1.27 - C ko:K00016 ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922 ko00000,ko00001,ko01000,ko04147 Belongs to the LDH MDH superfamily. LDH family
PMDBBNKE_02910 1.43e-129 pth 3.1.1.29 - J ko:K01056 - ko00000,ko01000,ko03012 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
PMDBBNKE_02911 0.0 mfd - - L ko:K03723 ko03420,map03420 ko00000,ko00001,ko01000,ko03400 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
PMDBBNKE_02912 0.0 yabM - - S ko:K03328 - ko00000 Polysaccharide biosynthesis protein
PMDBBNKE_02913 7.72e-57 yabO - - J - - - S4 domain protein
PMDBBNKE_02915 2.02e-83 divIC - - D ko:K13052 - ko00000,ko03036 Septum formation initiator
PMDBBNKE_02916 1.07e-103 yabR - - J ko:K07571 - ko00000 RNA binding
PMDBBNKE_02917 0.0 tilS 2.4.2.8, 6.3.4.19 - J ko:K04075,ko:K15780 ko00230,ko01100,ko01110,map00230,map01100,map01110 ko00000,ko00001,ko01000,ko03016 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
PMDBBNKE_02918 4.3e-124 hpt 2.4.2.8 - F ko:K00760 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 ko00000,ko00001,ko01000 Belongs to the purine pyrimidine phosphoribosyltransferase family
PMDBBNKE_02919 0.0 ftsH - - O ko:K03798 - ko00000,ko00002,ko01000,ko01002,ko03110 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
PMDBBNKE_02920 1.93e-209 hslO - - O ko:K04083 - ko00000,ko03110 Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
PMDBBNKE_02921 5.33e-243 dus - - J ko:K05540 - ko00000,ko01000,ko03016 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PMDBBNKE_02922 0.0 lysS 6.1.1.6 - J ko:K04567 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the class-II aminoacyl-tRNA synthetase family
PMDBBNKE_02925 0.0 dtpT - - U ko:K03305 - ko00000 amino acid peptide transporter
PMDBBNKE_02926 1.5e-194 - - - S - - - Calcineurin-like phosphoesterase
PMDBBNKE_02930 9.02e-66 - - - S - - - Cupin 2, conserved barrel domain protein
PMDBBNKE_02931 2.78e-71 - - - S - - - Cupin domain
PMDBBNKE_02932 1.31e-213 pphA 3.1.3.16 - T ko:K07313 - ko00000,ko01000 Calcineurin-like phosphoesterase
PMDBBNKE_02933 6.2e-245 ysdE - - P - - - Citrate transporter
PMDBBNKE_02934 5.06e-194 pnuC - - H ko:K03811 - ko00000,ko02000 nicotinamide mononucleotide transporter
PMDBBNKE_02935 5.35e-175 proC 1.5.1.2 - E ko:K00286 ko00330,ko01100,ko01110,ko01130,ko01230,map00330,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
PMDBBNKE_02936 2.92e-280 nagA 3.5.1.25 - G ko:K01443 ko00520,ko01130,map00520,map01130 ko00000,ko00001,ko01000 Belongs to the metallo-dependent hydrolases superfamily. NagA family
PMDBBNKE_02937 5.41e-160 yvoA_2 - - K ko:K03710 - ko00000,ko03000 UbiC transcription regulator-associated domain protein
PMDBBNKE_02938 6.62e-176 tagA 2.4.1.187 GT26 F ko:K05946 ko05111,map05111 ko00000,ko00001,ko01000,ko01003 Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
PMDBBNKE_02939 0.0 pncB 6.3.4.21 - F ko:K00763 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko01000 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
PMDBBNKE_02940 5.27e-197 nadE 6.3.1.5 - F ko:K01916 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
PMDBBNKE_02941 0.0 pacL 3.6.3.8 - P ko:K01537 - ko00000,ko01000 P-type ATPase
PMDBBNKE_02942 6.3e-95 - - - - ko:K02029,ko:K02030 - ko00000,ko00002,ko02000 -
PMDBBNKE_02943 0.0 tex - - K ko:K06959 - ko00000 Tex-like protein N-terminal domain protein
PMDBBNKE_02944 1.26e-105 ydcK - - S ko:K03095 - ko00000 Belongs to the SprT family
PMDBBNKE_02945 1.71e-302 hom 1.1.1.3 - E ko:K00003 ko00260,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00270,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 homoserine dehydrogenase
PMDBBNKE_02946 2.93e-202 thrB 2.7.1.39 - F ko:K00872 ko00260,ko01100,ko01110,ko01120,ko01230,map00260,map01100,map01110,map01120,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
PMDBBNKE_02949 4.34e-31 - - - - - - - -
PMDBBNKE_02950 0.0 ybfG - - M - - - peptidoglycan-binding domain-containing protein
PMDBBNKE_02953 3.4e-206 - - - G - - - Peptidase_C39 like family
PMDBBNKE_02954 6.46e-218 manL 2.7.1.191, 2.7.1.202 - G ko:K02769,ko:K02793,ko:K02794 ko00051,ko00520,ko01100,ko01120,ko02060,map00051,map00520,map01100,map01120,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system sorbose subfamily IIB component
PMDBBNKE_02955 4.51e-172 manM - - G ko:K02746,ko:K02795 ko00051,ko00052,ko00520,ko01100,ko02060,map00051,map00052,map00520,map01100,map02060 ko00000,ko00001,ko00002,ko02000 PTS system
PMDBBNKE_02956 1.87e-219 manN - - G ko:K02796 ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060 ko00000,ko00001,ko00002,ko02000 system, mannose fructose sorbose family IID component
PMDBBNKE_02957 9.05e-85 manO - - S - - - Domain of unknown function (DUF956)
PMDBBNKE_02958 0.0 levR - - K - - - Sigma-54 interaction domain
PMDBBNKE_02959 7.19e-94 levD 2.7.1.191, 2.7.1.202 - G ko:K02793,ko:K02794,ko:K11194 ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system fructose IIA component
PMDBBNKE_02960 4.5e-113 manX 2.7.1.191, 2.7.1.202 - G ko:K02769,ko:K02793,ko:K02794 ko00051,ko00520,ko01100,ko01120,ko02060,map00051,map00520,map01100,map01120,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system sorbose subfamily IIB component
PMDBBNKE_02961 2.58e-228 fabH 2.3.1.180 - I ko:K00648 ko00061,ko01100,ko01212,map00061,map01100,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
PMDBBNKE_02962 9.24e-85 accB1 - - I ko:K02160 ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212 ko00000,ko00001,ko00002 Biotin-requiring enzyme
PMDBBNKE_02963 1.98e-314 accC1 6.3.4.14, 6.4.1.2 - I ko:K01961 ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212 ko00000,ko00001,ko00002,ko01000 Biotin carboxylase C-terminal domain
PMDBBNKE_02964 6.33e-185 accD1 2.1.3.15, 6.4.1.2 - I ko:K01963 ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212 ko00000,ko00001,ko00002,ko01000 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
PMDBBNKE_02965 1.23e-177 accA1 2.1.3.15, 6.4.1.2 - I ko:K01962 ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212 ko00000,ko00001,ko00002,ko01000 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit
PMDBBNKE_02966 2.9e-234 brpA - - K - - - Cell envelope-like function transcriptional attenuator common domain protein
PMDBBNKE_02967 7.53e-215 mleP2 - - S ko:K07088 - ko00000 Transporter, auxin efflux carrier (AEC) family protein
PMDBBNKE_02968 6.04e-227 - - - EG - - - EamA-like transporter family
PMDBBNKE_02969 3.3e-166 gpmA1 5.4.2.11 - G ko:K01834 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PMDBBNKE_02970 1.86e-146 zmp2 - - O - - - Zinc-dependent metalloprotease
PMDBBNKE_02971 0.0 pepC 3.4.22.40 - E ko:K01372 - ko00000,ko01000,ko01002 Peptidase C1-like family
PMDBBNKE_02972 1.62e-158 rpiA 5.3.1.6 - G ko:K01807 ko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
PMDBBNKE_02973 5.96e-69 yjdJ - - S ko:K06975 - ko00000 GCN5-related N-acetyl-transferase
PMDBBNKE_02974 3.29e-127 dut 3.6.1.23 - F ko:K01520 ko00240,ko00983,ko01100,map00240,map00983,map01100 ko00000,ko00001,ko00002,ko01000,ko03400 dUTP diphosphatase
PMDBBNKE_02975 0.0 radA - - O ko:K04485 - ko00000,ko03400 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
PMDBBNKE_02976 4.91e-265 yacL - - S - - - domain protein
PMDBBNKE_02977 0.0 gltX 6.1.1.24 - J ko:K09698 ko00970,ko01100,map00970,map01100 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
PMDBBNKE_02978 0.0 cysS 6.1.1.16 - J ko:K01883 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the class-I aminoacyl-tRNA synthetase family
PMDBBNKE_02979 1.35e-92 mrnC - - J ko:K11145 - ko00000,ko01000,ko03009 Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
PMDBBNKE_02980 1.49e-177 trmH 2.1.1.185 - J ko:K03218 - ko00000,ko01000,ko03009 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PMDBBNKE_02981 5.87e-127 yacP - - S ko:K06962 - ko00000 YacP-like NYN domain
PMDBBNKE_02982 9.23e-130 sigH - - K ko:K03088,ko:K03091,ko:K12296 ko02020,ko02024,map02020,map02024 ko00000,ko00001,ko03000,ko03021 Sigma-70 region 2
PMDBBNKE_02983 4.55e-31 rpmG - - J ko:K02913 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL33 family
PMDBBNKE_02984 1e-39 secE - - U ko:K03073 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
PMDBBNKE_02985 7.71e-128 nusG - - K ko:K02601 - ko00000,ko03009,ko03021 Participates in transcription elongation, termination and antitermination
PMDBBNKE_02986 6.91e-203 - - - S - - - Alpha/beta hydrolase of unknown function (DUF915)
PMDBBNKE_02987 9.76e-93 rplK - - J ko:K02867 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
PMDBBNKE_02988 2.69e-158 rplA - - J ko:K02863 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
PMDBBNKE_02989 3.72e-105 rplJ - - J ko:K02864 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
PMDBBNKE_02990 2.76e-74 rplL - - J ko:K02935 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
PMDBBNKE_02992 6.57e-295 - - - L - - - Belongs to the 'phage' integrase family
PMDBBNKE_02998 1.69e-13 - - - M - - - LysM domain
PMDBBNKE_03002 9.87e-08 - - - K - - - Helix-turn-helix XRE-family like proteins
PMDBBNKE_03008 1.49e-126 - - - - - - - -
PMDBBNKE_03011 3.38e-23 - - - - - - - -
PMDBBNKE_03013 5.11e-43 - - - - - - - -
PMDBBNKE_03014 4.82e-195 - - - L ko:K07455 - ko00000,ko03400 RecT family
PMDBBNKE_03015 1.18e-177 pi112 - - L - - - PDDEXK-like domain of unknown function (DUF3799)
PMDBBNKE_03016 1.6e-201 - - - L - - - DnaD domain protein
PMDBBNKE_03017 8.97e-65 - - - - - - - -
PMDBBNKE_03018 5.17e-82 - - - K ko:K07741 - ko00000 AntA/AntB antirepressor
PMDBBNKE_03019 1.29e-80 - - - - - - - -
PMDBBNKE_03020 7.18e-85 - - - L - - - Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC
PMDBBNKE_03023 7.37e-08 - - - - - - - -
PMDBBNKE_03024 3.86e-107 - - - S - - - Phage transcriptional regulator, ArpU family
PMDBBNKE_03027 1.55e-24 - - - - - - - -
PMDBBNKE_03028 1.99e-23 - - - - - - - -
PMDBBNKE_03029 3.41e-61 - - - L - - - transposase activity
PMDBBNKE_03030 7.33e-237 - - - S - - - Phage terminase, large subunit, PBSX family
PMDBBNKE_03031 5.34e-137 - - - S - - - Phage portal protein, SPP1 Gp6-like
PMDBBNKE_03032 2.35e-42 - - - S - - - Phage minor capsid protein 2
PMDBBNKE_03033 2.61e-11 - - - S - - - Phage minor capsid protein 2
PMDBBNKE_03035 3.01e-136 - - - - - - - -
PMDBBNKE_03036 2.98e-06 - - - - - - - -
PMDBBNKE_03037 1.51e-19 - - - - - - - -
PMDBBNKE_03041 3.36e-56 - - - N - - - domain, Protein
PMDBBNKE_03044 1.08e-179 - - - L - - - Phage tail tape measure protein TP901
PMDBBNKE_03046 1.41e-123 - - - S - - - Prophage endopeptidase tail
PMDBBNKE_03049 6.74e-89 - - - S - - - Calcineurin-like phosphoesterase
PMDBBNKE_03052 3.52e-81 - - - - - - - -
PMDBBNKE_03053 1.97e-32 - - - - - - - -
PMDBBNKE_03054 1.1e-255 - - - M - - - Glycosyl hydrolases family 25
PMDBBNKE_03055 2.16e-48 - - - S - - - Haemolysin XhlA
PMDBBNKE_03058 2.48e-46 - - - K - - - acetyltransferase
PMDBBNKE_03059 7.5e-22 - - - V - - - Abi-like protein
PMDBBNKE_03060 5.84e-226 - - - F ko:K15051 - ko00000 DNA/RNA non-specific endonuclease
PMDBBNKE_03061 4.16e-87 - - - L - - - nuclease
PMDBBNKE_03062 0.0 mprF 2.3.2.3 - S ko:K14205 ko01503,ko02020,ko05150,map01503,map02020,map05150 ko00000,ko00001,ko00002,ko01000,ko01504 Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
PMDBBNKE_03063 2.37e-140 yvdD 3.2.2.10 - S ko:K06966 ko00230,ko00240,map00230,map00240 ko00000,ko00001,ko01000 Belongs to the LOG family
PMDBBNKE_03064 2.47e-253 nrdF 1.17.4.1 - F ko:K00526 ko00230,ko00240,ko01100,map00230,map00240,map01100 ko00000,ko00001,ko00002,ko01000,ko03400 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PMDBBNKE_03065 0.0 nrdE 1.17.4.1 - F ko:K00525 ko00230,ko00240,ko01100,map00230,map00240,map01100 ko00000,ko00001,ko00002,ko01000,ko03400 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PMDBBNKE_03066 8.42e-50 nrdH - - O ko:K06191 - ko00000 Glutaredoxin
PMDBBNKE_03067 6.7e-141 rsmC 2.1.1.172 - J ko:K00564 - ko00000,ko01000,ko03009 Methyltransferase
PMDBBNKE_03068 7.57e-119 tadA 3.5.4.33 - F ko:K11991 - ko00000,ko01000,ko03016 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
PMDBBNKE_03069 0.0 dnaX 2.7.7.7 - L ko:K02343 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PMDBBNKE_03070 2.05e-62 yaaK - - S ko:K09747 - ko00000 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
PMDBBNKE_03071 6.22e-140 recR - - L ko:K06187 ko03440,map03440 ko00000,ko00001,ko03400 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
PMDBBNKE_03072 1.01e-51 yaaL - - S - - - Protein of unknown function (DUF2508)
PMDBBNKE_03073 2.22e-153 tmk 2.7.4.9 - F ko:K00943 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
PMDBBNKE_03074 1.39e-70 yaaQ - - S - - - Cyclic-di-AMP receptor
PMDBBNKE_03075 9.5e-239 holB 2.7.7.7 - L ko:K02341 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase III
PMDBBNKE_03076 8.46e-77 yabA - - L - - - Involved in initiation control of chromosome replication
PMDBBNKE_03077 1.53e-212 rsmI 2.1.1.198 - H ko:K07056 - ko00000,ko01000,ko03009 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
PMDBBNKE_03078 3.17e-191 fat 3.1.2.21 - I ko:K01071 ko00061,ko01100,map00061,map01100 ko00000,ko00001,ko01000,ko01004 Acyl-ACP thioesterase
PMDBBNKE_03079 2.86e-245 galE 5.1.3.2 - M ko:K01784 ko00052,ko00520,ko01100,map00052,map00520,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the NAD(P)-dependent epimerase dehydratase family
PMDBBNKE_03080 8.87e-269 phnW 2.6.1.37 - E ko:K03430 ko00440,ko01100,ko01120,map00440,map01100,map01120 ko00000,ko00001,ko01000,ko01007 Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. PhnW subfamily
PMDBBNKE_03081 1.97e-187 phnX 3.11.1.1 - E ko:K05306 ko00440,ko01100,ko01120,map00440,map01100,map01120 ko00000,ko00001,ko01000 Belongs to the HAD-like hydrolase superfamily. PhnX family
PMDBBNKE_03082 3.33e-184 phnE1 - - U ko:K02042 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter permease
PMDBBNKE_03083 2.65e-177 phnE2 - - U ko:K02042 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Phosphonate ABC transporter permease
PMDBBNKE_03084 9.33e-177 phnC 3.6.3.28 - P ko:K02041 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
PMDBBNKE_03085 2.84e-241 phnD - - P ko:K02044 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Phosphonate ABC transporter
PMDBBNKE_03086 6.84e-167 yeaZ 2.3.1.234 - O ko:K01409,ko:K14742 - ko00000,ko01000,ko03016 Universal bacterial protein YeaZ
PMDBBNKE_03087 4.66e-131 rimI 2.3.1.128 - K ko:K03789 - ko00000,ko01000,ko03009 Ribosomal-protein-alanine acetyltransferase
PMDBBNKE_03088 3.32e-107 rimI 2.3.1.128 - K ko:K03789 - ko00000,ko01000,ko03009 This enzyme acetylates the N-terminal alanine of ribosomal protein S18
PMDBBNKE_03089 7.63e-251 tsaD 2.3.1.234 - J ko:K01409 - ko00000,ko01000,ko03016 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
PMDBBNKE_03090 0.0 ydiF - - S ko:K06158 - ko00000,ko03012 ABC transporter, ATP-binding protein
PMDBBNKE_03091 3.67e-154 rex - - K ko:K01926 - ko00000,ko03000 Modulates transcription in response to changes in cellular NADH NAD( ) redox state
PMDBBNKE_03092 1.68e-140 ydiL - - S ko:K07052 - ko00000 CAAX protease self-immunity
PMDBBNKE_03093 9.82e-55 groS - - O ko:K04078 - ko00000,ko03029,ko03110 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
PMDBBNKE_03094 0.0 groL - - O ko:K04077 ko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152 ko00000,ko00001,ko03019,ko03029,ko03110,ko04147 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
PMDBBNKE_03095 0.0 ydaO - - E - - - amino acid
PMDBBNKE_03096 7.29e-247 tagO 2.7.8.33, 2.7.8.35 - M ko:K02851 - ko00000,ko01000,ko01003,ko01005 transferase
PMDBBNKE_03097 6.57e-199 pstS - - P ko:K02040 ko02010,ko02020,ko05152,map02010,map02020,map05152 ko00000,ko00001,ko00002,ko02000 Phosphate
PMDBBNKE_03098 9.07e-150 yvyE 3.4.13.9 - S ko:K01271 - ko00000,ko01000,ko01002 YigZ family
PMDBBNKE_03099 0.0 comFA - - L ko:K02240 - ko00000,ko00002,ko02044 Helicase C-terminal domain protein
PMDBBNKE_03100 2.94e-164 comFC - - S ko:K02242 - ko00000,ko00002,ko02044 Competence protein
PMDBBNKE_03101 1.27e-129 hpf - - J ko:K05808 - ko00000,ko03009 Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
PMDBBNKE_03102 0.0 secA - - U ko:K03070 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
PMDBBNKE_03103 1.69e-257 prfB - - J ko:K02836 - ko00000,ko03012 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
PMDBBNKE_03104 1.28e-276 minJ - - O - - - Domain present in PSD-95, Dlg, and ZO-1/2.
PMDBBNKE_03105 1.49e-170 phoP - - K ko:K07658 ko02020,map02020 ko00000,ko00001,ko00002,ko02022 response regulator
PMDBBNKE_03106 0.0 phoR 2.7.13.3 - T ko:K07636 ko02020,map02020 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Histidine kinase
PMDBBNKE_03107 1.19e-201 pstS - - P ko:K02040 ko02010,ko02020,ko05152,map02010,map02020,map05152 ko00000,ko00001,ko00002,ko02000 Phosphate
PMDBBNKE_03108 2.22e-206 pstC - - P ko:K02037 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 probably responsible for the translocation of the substrate across the membrane
PMDBBNKE_03109 5.04e-200 pstA - - P ko:K02038 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Phosphate transport system permease protein PstA
PMDBBNKE_03110 9.78e-190 pstB2 3.6.3.27 - P ko:K02036 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PMDBBNKE_03111 2.31e-179 pstB1 3.6.3.27 - P ko:K02036 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PMDBBNKE_03112 1.55e-150 phoU - - P ko:K02039 - ko00000 Plays a role in the regulation of phosphate uptake
PMDBBNKE_03113 7.97e-65 pspC - - KT ko:K03973 - ko00000,ko02048,ko03000 positive regulation of macromolecule biosynthetic process
PMDBBNKE_03114 2.87e-71 yvlD - - S ko:K08972 - ko00000 Mycobacterial 4 TMS phage holin, superfamily IV
PMDBBNKE_03115 2.55e-225 hprK - - F ko:K06023 - ko00000,ko01000 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
PMDBBNKE_03116 1.04e-211 lgt - - M ko:K13292 - ko00000,ko01000 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
PMDBBNKE_03117 2.82e-235 gpsA 1.1.1.94 - I ko:K00057 ko00564,ko01110,map00564,map01110 ko00000,ko00001,ko01000 Glycerol-3-phosphate dehydrogenase
PMDBBNKE_03118 1.13e-218 galU 2.7.7.9 - M ko:K00963 ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130 ko00000,ko00001,ko00002,ko01000 UTP-glucose-1-phosphate uridylyltransferase
PMDBBNKE_03119 6.37e-160 - - - T - - - Putative diguanylate phosphodiesterase
PMDBBNKE_03120 0.0 nox - - C - - - NADH oxidase
PMDBBNKE_03121 5.25e-206 ydaJ - - G - - - Belongs to the glycosyl hydrolase 8 (cellulase D) family
PMDBBNKE_03122 4.95e-310 - - - - - - - -
PMDBBNKE_03123 2.39e-256 - - - S - - - Protein conserved in bacteria
PMDBBNKE_03124 2.74e-277 ydaM - - M - - - Glycosyl transferase family group 2
PMDBBNKE_03125 0.0 - - - S - - - Bacterial cellulose synthase subunit
PMDBBNKE_03126 7.91e-172 - - - T - - - diguanylate cyclase activity
PMDBBNKE_03127 8.65e-226 trxB 1.8.1.9 - C ko:K00384 ko00450,map00450 ko00000,ko00001,ko01000 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
PMDBBNKE_03128 4.31e-141 yviA - - S - - - Protein of unknown function (DUF421)
PMDBBNKE_03129 7.54e-99 - - - S - - - Protein of unknown function (DUF3290)
PMDBBNKE_03130 0.0 pgm 5.4.2.2 - G ko:K01835 ko00010,ko00030,ko00052,ko00230,ko00500,ko00520,ko00521,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00052,map00230,map00500,map00520,map00521,map01100,map01110,map01120,map01130 ko00000,ko00001,ko00002,ko01000 Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
PMDBBNKE_03131 5.9e-170 - - - T - - - Putative diguanylate phosphodiesterase
PMDBBNKE_03132 0.0 nox2 - - S - - - Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
PMDBBNKE_03133 4.63e-135 aad 3.4.13.22 - E ko:K08641 ko01502,ko02020,map01502,map02020 ko00000,ko00001,ko00002,ko01000,ko01002,ko01011,ko01504 Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
PMDBBNKE_03134 2.53e-266 blt - - EGP ko:K08153 - ko00000,ko00002,ko02000 transporter
PMDBBNKE_03135 9.45e-152 yfbR - - S ko:K07023 - ko00000 HD containing hydrolase-like enzyme
PMDBBNKE_03136 0.0 uvrB - - L ko:K03702 ko03420,map03420 ko00000,ko00001,ko03400 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
PMDBBNKE_03137 0.0 uvrA - - L ko:K03701 ko03420,map03420 ko00000,ko00001,ko03400 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
PMDBBNKE_03138 2.21e-113 luxS 4.4.1.21 - H ko:K07173 ko00270,ko01100,ko01230,ko02024,ko02026,ko05111,map00270,map01100,map01230,map02024,map02026,map05111 ko00000,ko00001,ko00002,ko01000 Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
PMDBBNKE_03139 7.5e-302 argG 6.3.4.5 - E ko:K01940 ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,ko05418,map00220,map00250,map01100,map01110,map01130,map01230,map05418 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the argininosuccinate synthase family. Type 1 subfamily
PMDBBNKE_03140 0.0 argH 4.3.2.1 - E ko:K01755 ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,map00220,map00250,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000,ko04147 argininosuccinate lyase
PMDBBNKE_03141 8.62e-114 - - - S - - - Short repeat of unknown function (DUF308)
PMDBBNKE_03142 1.71e-207 yvcJ - - S ko:K06958 - ko00000,ko03019 Displays ATPase and GTPase activities
PMDBBNKE_03143 4.56e-243 yvcK - - S - - - Required for morphogenesis under gluconeogenic growth conditions
PMDBBNKE_03144 1.21e-215 whiA - - K ko:K09762 - ko00000 May be required for sporulation
PMDBBNKE_03145 0.0 oppA - - E ko:K02035,ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter, substratebinding protein
PMDBBNKE_03146 1.55e-225 - 1.1.1.26 - CH ko:K00015 ko00630,ko01100,ko01110,ko01120,map00630,map01100,map01110,map01120 ko00000,ko00001,ko01000 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PMDBBNKE_03147 5.11e-133 clpP 3.4.21.92 - O ko:K01358 ko04112,ko04212,map04112,map04212 ko00000,ko00001,ko01000,ko01002 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
PMDBBNKE_03149 1.14e-311 rpoN - - K ko:K03092 ko02020,ko05111,map02020,map05111 ko00000,ko00001,ko03021 Sigma-54 factor, core binding domain
PMDBBNKE_03150 5.75e-242 cggR - - K ko:K05311 - ko00000,ko03000 Putative sugar-binding domain
PMDBBNKE_03151 2.02e-245 gap 1.2.1.12 - G ko:K00134 ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
PMDBBNKE_03152 1.31e-285 pgk 2.7.2.3 - F ko:K00927 ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the phosphoglycerate kinase family
PMDBBNKE_03153 7.15e-179 tpiA 5.3.1.1 - G ko:K01803 ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko04147 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
PMDBBNKE_03154 0.0 eno 4.2.1.11 - G ko:K01689 ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066 ko00000,ko00001,ko00002,ko01000,ko03019,ko04147 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
PMDBBNKE_03155 6.94e-169 - - - - - - - -
PMDBBNKE_03156 0.0 eriC - - P ko:K03281 - ko00000 chloride
PMDBBNKE_03157 1.76e-43 secG - - U ko:K03075 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Preprotein translocase
PMDBBNKE_03158 6.62e-180 est 3.1.1.1 - S ko:K03928 - ko00000,ko01000 Serine aminopeptidase, S33
PMDBBNKE_03159 0.0 rnr - - J ko:K12573 ko03018,map03018 ko00000,ko00001,ko01000,ko03016,ko03019 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
PMDBBNKE_03160 2.4e-107 smpB - - J ko:K03664 - ko00000 the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
PMDBBNKE_03161 0.0 - - - M - - - Domain of unknown function (DUF5011)
PMDBBNKE_03162 0.0 glnP - - P ko:K02029,ko:K02030,ko:K10036 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter
PMDBBNKE_03163 9.36e-171 glnQ 3.6.3.21 - E ko:K02028 - ko00000,ko00002,ko01000,ko02000 ABC transporter, ATP-binding protein
PMDBBNKE_03164 5.62e-137 - - - - - - - -
PMDBBNKE_03165 1.98e-199 ycsE - - S - - - Sucrose-6F-phosphate phosphohydrolase
PMDBBNKE_03166 1.4e-174 ung 3.2.2.27 - L ko:K03648 ko03410,ko05340,map03410,map05340 ko00000,ko00001,ko01000,ko03400 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
PMDBBNKE_03167 1.23e-227 pta 2.3.1.8, 3.6.3.21 - C ko:K00625,ko:K02028 ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000,ko02000 phosphate acetyltransferase
PMDBBNKE_03168 1.29e-105 ydiB - - O ko:K06925 - ko00000,ko03016 Hydrolase, P-loop family
PMDBBNKE_03169 2.52e-114 - - - J - - - Acetyltransferase (GNAT) domain
PMDBBNKE_03170 4.16e-130 dnaQ 2.7.7.7 - L ko:K02342 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase III
PMDBBNKE_03171 5.96e-197 exoA 3.1.11.2 - L ko:K01142 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 exodeoxyribonuclease III
PMDBBNKE_03172 2.72e-207 ysjB - - S ko:K03810 - ko00000 Oxidoreductase family, NAD-binding Rossmann fold
PMDBBNKE_03173 6.24e-214 murB 1.3.1.98 - M ko:K00075 ko00520,ko00550,ko01100,map00520,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Cell wall formation
PMDBBNKE_03174 0.0 yvgP - - P ko:K03316 - ko00000 Sodium proton antiporter
PMDBBNKE_03175 3.07e-119 - - - K - - - helix_turn_helix multiple antibiotic resistance protein
PMDBBNKE_03176 6.9e-157 - - - S - - - Protein of unknown function (DUF1361)
PMDBBNKE_03177 8.33e-192 dacA 2.7.7.85 - S ko:K18672 - ko00000,ko01000 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
PMDBBNKE_03178 2.18e-182 ybbR - - S - - - YbbR-like protein
PMDBBNKE_03179 0.0 glmM 5.4.2.10 - G ko:K03431 ko00520,ko01100,ko01130,map00520,map01100,map01130 ko00000,ko00001,ko01000 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
PMDBBNKE_03180 0.0 glmS 2.6.1.16 - M ko:K00820 ko00250,ko00520,ko01100,ko01130,ko04931,map00250,map00520,map01100,map01130,map04931 ko00000,ko00001,ko01000,ko01002 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
PMDBBNKE_03181 5.44e-159 - - - T - - - EAL domain
PMDBBNKE_03182 8.04e-190 - 3.1.3.23 - S ko:K07757 - ko00000,ko01000 Sucrose-6F-phosphate phosphohydrolase
PMDBBNKE_03183 1.21e-135 - - - K - - - Bacterial regulatory proteins, tetR family
PMDBBNKE_03184 2.07e-263 galM 5.1.3.3 - G ko:K01785 ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the interconversion of alpha and beta anomers of maltose
PMDBBNKE_03185 1.96e-69 - - - - - - - -
PMDBBNKE_03186 2.49e-95 - - - - - - - -
PMDBBNKE_03187 8.24e-168 nfrA 1.5.1.38 - C ko:K19285 ko00740,ko01100,map00740,map01100 ko00000,ko00001,ko01000 nitroreductase
PMDBBNKE_03188 3.51e-197 - - - G ko:K08217 - br01600,ko00000,ko01504,ko02000 Transmembrane secretion effector
PMDBBNKE_03189 0.0 glpK 2.7.1.30 - F ko:K00864 ko00561,ko01100,ko03320,ko04626,map00561,map01100,map03320,map04626 ko00000,ko00001,ko01000,ko04147 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
PMDBBNKE_03190 5.03e-183 - - - - - - - -
PMDBBNKE_03192 5.45e-94 spx1 - - P ko:K16509 - ko00000 ArsC family
PMDBBNKE_03193 3.88e-46 - - - - - - - -
PMDBBNKE_03194 2.08e-117 - - - V - - - VanZ like family
PMDBBNKE_03195 4.22e-228 - - - EGP - - - Major Facilitator
PMDBBNKE_03196 1.67e-35 - - - EGP - - - Major Facilitator
PMDBBNKE_03197 4.45e-226 ppx 3.6.1.11, 3.6.1.40 - FP ko:K01524 ko00230,map00230 ko00000,ko00001,ko01000 exopolyphosphatase
PMDBBNKE_03198 0.0 ppk 2.7.4.1 - P ko:K00937 ko00190,ko03018,map00190,map03018 ko00000,ko00001,ko01000,ko03019 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
PMDBBNKE_03199 0.0 ppx3 3.6.1.11, 3.6.1.40 - FP ko:K01524 ko00230,map00230 ko00000,ko00001,ko01000 exopolyphosphatase
PMDBBNKE_03200 6.68e-197 licD - - M ko:K07271 - ko00000,ko01000 LicD family
PMDBBNKE_03201 6.16e-107 - - - K - - - Transcriptional regulator
PMDBBNKE_03202 3.22e-26 - - - - - - - -
PMDBBNKE_03203 1.79e-287 pbuG - - S ko:K06901 - ko00000,ko02000 permease
PMDBBNKE_03204 0.0 pox1 1.2.3.3 - EH ko:K00158 ko00620,ko01100,map00620,map01100 ko00000,ko00001,ko01000 Belongs to the TPP enzyme family
PMDBBNKE_03205 1.31e-116 ribC1 2.7.1.26, 2.7.7.2 - H ko:K11753 ko00740,ko01100,ko01110,map00740,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Belongs to the ribF family
PMDBBNKE_03206 0.0 pox2 1.2.3.3 - EH ko:K00158 ko00620,ko01100,map00620,map01100 ko00000,ko00001,ko01000 Belongs to the TPP enzyme family
PMDBBNKE_03207 6.37e-232 pepR 3.4.11.5 - E ko:K01259 ko00330,map00330 ko00000,ko00001,ko01000,ko01002 Releases the N-terminal proline from various substrates
PMDBBNKE_03208 1.23e-229 birA 6.3.4.15 - H ko:K03524 ko00780,ko01100,map00780,map01100 ko00000,ko00001,ko01000,ko03000 Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
PMDBBNKE_03209 0.0 oatA - - I - - - Acyltransferase
PMDBBNKE_03210 0.0 pepX 3.4.14.11 - E ko:K01281 - ko00000,ko01000,ko01002 Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
PMDBBNKE_03211 1.89e-90 - - - O - - - OsmC-like protein
PMDBBNKE_03212 1.09e-60 - - - - - - - -
PMDBBNKE_03213 0.0 yhdG - - E ko:K03294 - ko00000 Amino Acid
PMDBBNKE_03214 6.12e-115 - - - - - - - -
PMDBBNKE_03215 3.03e-190 pdxK 2.7.1.35 - H ko:K00868 ko00750,ko01100,map00750,map01100 ko00000,ko00001,ko01000 Phosphomethylpyrimidine kinase
PMDBBNKE_03216 7.48e-96 - - - F - - - Nudix hydrolase
PMDBBNKE_03217 1.48e-27 - - - - - - - -
PMDBBNKE_03218 3.48e-134 gmk2 2.7.4.8 - F ko:K00942 ko00230,ko01100,map00230,map01100 ko00000,ko00001,ko00002,ko01000 Guanylate kinase
PMDBBNKE_03219 2.02e-106 zur - - P ko:K02076,ko:K03711 - ko00000,ko03000 Belongs to the Fur family
PMDBBNKE_03220 8.84e-18 - 3.2.1.14 GH18 - ko:K01183 ko00520,ko01100,map00520,map01100 ko00000,ko00001,ko01000 -
PMDBBNKE_03221 1.01e-188 - - - - - - - -
PMDBBNKE_03222 6.94e-146 gph1 3.1.3.18 - S ko:K01091 ko00630,ko01100,ko01110,ko01130,map00630,map01100,map01110,map01130 ko00000,ko00001,ko01000 HAD hydrolase, family IA, variant
PMDBBNKE_03223 3.21e-268 aspC 2.6.1.57 - E ko:K00832,ko:K00841 ko00270,ko00300,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01230,map00270,map00300,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Aminotransferase
PMDBBNKE_03224 1.03e-217 ldhD 1.1.1.28 - CH ko:K03778 ko00620,ko01120,map00620,map01120 ko00000,ko00001,ko01000 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PMDBBNKE_03225 1.23e-52 - - - - - - - -
PMDBBNKE_03227 2.3e-172 glnQ - - E ko:K10041 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ABC transporter, ATP-binding protein
PMDBBNKE_03228 3.39e-190 glnH - - ET ko:K10039 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter substrate-binding protein
PMDBBNKE_03229 3.14e-140 glnM - - P ko:K10040 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter permease
PMDBBNKE_03230 1.27e-141 glnP - - P ko:K10040 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter permease
PMDBBNKE_03231 2.1e-109 - - - G ko:K02777 ko00010,ko00500,ko00520,ko02026,ko02060,ko05111,map00010,map00500,map00520,map02026,map02060,map05111 ko00000,ko00001,ko00002,ko01000,ko02000 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
PMDBBNKE_03232 1.34e-197 - - - K ko:K03488 - ko00000,ko03000 CAT RNA binding domain
PMDBBNKE_03233 0.0 - - - G ko:K02755,ko:K02756,ko:K02757 ko02060,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 phosphotransferase system, EIIB
PMDBBNKE_03234 6.38e-182 - 3.5.1.105 - G ko:K03478 - ko00000,ko01000 YdjC-like protein
PMDBBNKE_03235 3e-315 steT - - E ko:K03294 - ko00000 amino acid
PMDBBNKE_03236 2.55e-95 - - - K - - - helix_turn_helix multiple antibiotic resistance protein
PMDBBNKE_03237 8.87e-191 - - - S - - - Sulfite exporter TauE/SafE
PMDBBNKE_03238 3.08e-93 - - - K - - - MarR family
PMDBBNKE_03239 3.76e-268 - - - EGP - - - Major Facilitator Superfamily
PMDBBNKE_03240 2.93e-109 - - - S ko:K07090 - ko00000 membrane transporter protein
PMDBBNKE_03241 1.81e-128 - - - K - - - Bacterial regulatory proteins, tetR family
PMDBBNKE_03242 5.95e-300 hflX - - S ko:K03665 - ko00000,ko03009 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
PMDBBNKE_03243 1.13e-102 rppH3 - - F - - - NUDIX domain
PMDBBNKE_03244 3.5e-64 sugE - - U ko:K11741 - ko00000,ko02000 Multidrug resistance protein
PMDBBNKE_03245 1.61e-36 - - - - - - - -
PMDBBNKE_03246 2.61e-163 pgm3 - - G - - - Phosphoglycerate mutase family
PMDBBNKE_03247 2.07e-161 gpm2 - - G - - - Phosphoglycerate mutase family
PMDBBNKE_03248 0.0 yjbQ - - P ko:K03455,ko:K03499 - ko00000,ko02000 TrkA C-terminal domain protein
PMDBBNKE_03249 4.16e-227 - 3.6.1.55 - F ko:K03574 - ko00000,ko01000,ko03400 Belongs to the Nudix hydrolase family
PMDBBNKE_03250 1.07e-203 - - - K ko:K03488 - ko00000,ko03000 CAT RNA binding domain
PMDBBNKE_03251 0.0 - - - G ko:K02755,ko:K02756,ko:K02757 ko02060,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 phosphotransferase system
PMDBBNKE_03252 0.0 - 3.2.1.86 GT1 G ko:K01223 ko00010,ko00500,map00010,map00500 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 1 family
PMDBBNKE_03253 1.75e-142 - - - S ko:K03975 - ko00000 SNARE associated Golgi protein
PMDBBNKE_03254 0.0 helD 3.6.4.12 - L ko:K03657 ko03420,ko03430,map03420,map03430 ko00000,ko00001,ko01000,ko03400 DNA helicase
PMDBBNKE_03255 3.59e-212 fabK 1.3.1.9 - S ko:K02371 ko00061,ko01100,ko01212,map00061,map01100,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 Nitronate monooxygenase
PMDBBNKE_03256 3.69e-230 coaA 2.7.1.33 - F ko:K00867 ko00770,ko01100,map00770,map01100 ko00000,ko00001,ko00002,ko01000 Pantothenic acid kinase
PMDBBNKE_03257 0.0 guaA 6.3.5.2 - F ko:K01951 ko00230,ko00983,ko01100,map00230,map00983,map01100 ko00000,ko00001,ko00002,ko01000,ko01002 Catalyzes the synthesis of GMP from XMP
PMDBBNKE_03258 3.57e-129 - - - K - - - Transcriptional regulator, AbiEi antitoxin
PMDBBNKE_03259 1.08e-71 - - - - - - - -
PMDBBNKE_03260 1.37e-83 - - - K - - - Helix-turn-helix domain
PMDBBNKE_03261 0.0 - - - L - - - AAA domain
PMDBBNKE_03262 2.01e-149 XK27_07075 - - V ko:K07052 - ko00000 CAAX protease self-immunity
PMDBBNKE_03263 1.53e-74 - - - K - - - HxlR-like helix-turn-helix
PMDBBNKE_03264 4.73e-302 yceJ - - EGP ko:K08221 - ko00000,ko02000 transporter
PMDBBNKE_03265 1.07e-300 - - - S - - - Cysteine-rich secretory protein family
PMDBBNKE_03266 1.59e-64 - - - K - - - Cro/C1-type HTH DNA-binding domain
PMDBBNKE_03267 3.63e-96 - - - D - - - nuclear chromosome segregation

eggNOG-mapper v2.1.12 (Database: eggNOG v5.0.2, Mar. 2021 release)