ORF_ID e_value Gene_name EC_number CAZy COGs KEGG_ko KEGG_Pathway BRITE Description
BIBIDAFE_00001 3.27e-277 - - - S - - - Membrane
BIBIDAFE_00002 9.91e-68 - - - - - - - -
BIBIDAFE_00003 4.54e-27 - - - S - - - D-Ala-teichoic acid biosynthesis protein
BIBIDAFE_00004 0.0 dltA 6.1.1.13 - H ko:K03367 ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150 ko00000,ko00001,ko00002,ko01000,ko01504 Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
BIBIDAFE_00005 4.08e-311 dltB - - M ko:K03739 ko01503,ko02020,ko05150,map01503,map02020,map05150 ko00000,ko00001,ko00002,ko01504 MBOAT, membrane-bound O-acyltransferase family
BIBIDAFE_00006 2.46e-48 dltC 6.1.1.13 - J ko:K14188 ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150 ko00000,ko00001,ko00002,ko01000,ko01504 Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
BIBIDAFE_00007 9.71e-317 dltD - - M ko:K03740 ko01503,ko02020,ko05150,map01503,map02020,map05150 ko00000,ko00001,ko00002,ko01504 Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
BIBIDAFE_00008 1.38e-223 pbpX2 - - V - - - Beta-lactamase
BIBIDAFE_00011 7.99e-152 - - - S ko:K07052 - ko00000 CAAX protease self-immunity
BIBIDAFE_00012 5.65e-38 - - - - - - - -
BIBIDAFE_00013 5.19e-67 - - - - - - - -
BIBIDAFE_00014 2.32e-161 - - - S - - - Protein of unknown function (DUF975)
BIBIDAFE_00015 4.62e-187 lysA2 - - M ko:K07273 - ko00000 Glycosyl hydrolases family 25
BIBIDAFE_00016 0.0 ytgP - - S ko:K03328 - ko00000 Polysaccharide biosynthesis protein
BIBIDAFE_00017 4.81e-50 - - - - - - - -
BIBIDAFE_00018 2.94e-282 ylbB - - V ko:K02004 - ko00000,ko00002,ko02000 ABC transporter permease
BIBIDAFE_00019 2.94e-138 ylbB - - V ko:K02004 - ko00000,ko00002,ko02000 ABC transporter permease
BIBIDAFE_00020 1.71e-159 - - - V ko:K02003 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
BIBIDAFE_00021 4.63e-277 pts13C - - G ko:K02761 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko02000 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
BIBIDAFE_00022 1.22e-218 - - - S - - - Alpha/beta hydrolase of unknown function (DUF915)
BIBIDAFE_00023 0.0 clpE - - O ko:K03697,ko:K04086 - ko00000,ko03110 AAA domain (Cdc48 subfamily)
BIBIDAFE_00024 3.58e-155 sipS3 3.4.21.89 - U ko:K03100 ko02024,ko03060,map02024,map03060 ko00000,ko00001,ko01000,ko01002 Belongs to the peptidase S26 family
BIBIDAFE_00025 8.44e-163 - - - - - - - -
BIBIDAFE_00026 1.95e-307 aapA - - E ko:K03293,ko:K11737 - ko00000,ko02000 Amino acid permease
BIBIDAFE_00027 1.76e-312 yifK - - E ko:K03293 - ko00000 Amino acid permease
BIBIDAFE_00028 4.82e-55 XK27_08630 - - T ko:K07166 - ko00000 Belongs to the UPF0237 family
BIBIDAFE_00029 4.18e-315 XK27_08635 - - S ko:K09157 - ko00000 UPF0210 protein
BIBIDAFE_00030 3.14e-312 srrA1 - - G ko:K02027,ko:K17244 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Bacterial extracellular solute-binding protein
BIBIDAFE_00031 0.0 carB 6.3.5.5 - F ko:K01955 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Carbamoyl-phosphate synthase
BIBIDAFE_00032 8.52e-269 carA 6.3.5.5 - F ko:K01956 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Carbamoyl-phosphate synthetase glutamine chain
BIBIDAFE_00033 4.3e-315 pyrC 3.5.2.3 - F ko:K01465 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
BIBIDAFE_00034 2.82e-234 pyrB 2.1.3.2 - F ko:K00609 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the ATCase OTCase family
BIBIDAFE_00035 5.02e-123 pyrR 2.4.2.9 - F ko:K02825 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko01000,ko03000 Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
BIBIDAFE_00036 9.2e-214 pyrD 1.3.1.14, 1.3.98.1 - F ko:K00226,ko:K17828 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
BIBIDAFE_00037 1.1e-164 pyrF 4.1.1.23 - F ko:K01591 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
BIBIDAFE_00038 9.51e-148 pyrE 2.4.2.10 - F ko:K00762 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
BIBIDAFE_00039 1.15e-44 - - - S ko:K18918 - ko00000,ko02048,ko03000 RelB antitoxin
BIBIDAFE_00040 1.07e-89 - - - K - - - Acetyltransferase (GNAT) domain
BIBIDAFE_00041 5.47e-91 - - - L - - - Transposase and inactivated derivatives, IS30 family
BIBIDAFE_00042 9.02e-42 - - - M ko:K21471 - ko00000,ko01000,ko01002,ko01011 NlpC/P60 family
BIBIDAFE_00043 1.01e-125 - - - T ko:K16923 - ko00000,ko00002,ko02000 phosphorelay sensor kinase activity
BIBIDAFE_00044 1.47e-170 - - - P ko:K16785 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Cobalt transport protein
BIBIDAFE_00045 7.53e-203 - - - P ko:K16786 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ABC transporter
BIBIDAFE_00046 1.2e-193 - - - P ko:K16787 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ABC transporter
BIBIDAFE_00047 1.3e-60 - - - L - - - Psort location Cytoplasmic, score
BIBIDAFE_00048 0.0 - 1.8.1.7 - C ko:K00383,ko:K21739 ko00480,ko04918,map00480,map04918 ko00000,ko00001,ko01000 Pyridine nucleotide-disulfide oxidoreductase
BIBIDAFE_00049 2.24e-245 - - - S - - - SLAP domain
BIBIDAFE_00050 1.64e-239 - - - S - - - Bacteriocin helveticin-J
BIBIDAFE_00051 2.43e-206 - - - - - - - -
BIBIDAFE_00052 5.13e-213 - - - L - - - Transposase
BIBIDAFE_00053 2.57e-20 - - - L ko:K03724 - ko00000,ko01000,ko03400 DEAD DEAH box helicase
BIBIDAFE_00054 4.75e-80 - - - - - - - -
BIBIDAFE_00055 7.18e-182 - - - S - - - Uncharacterized protein conserved in bacteria (DUF2263)
BIBIDAFE_00056 1.02e-33 - - - S - - - PD-(D/E)XK nuclease family transposase
BIBIDAFE_00057 1.06e-17 B4168_4126 - - L ko:K07493 - ko00000 Transposase
BIBIDAFE_00058 9.39e-167 frlR1 - - K ko:K03710,ko:K10711 - ko00000,ko03000 UTRA
BIBIDAFE_00059 2.31e-231 - - - S - - - Oxidoreductase family, NAD-binding Rossmann fold
BIBIDAFE_00060 3.02e-32 deoC 4.1.2.4 - F ko:K01619 ko00030,map00030 ko00000,ko00001,ko01000 Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
BIBIDAFE_00061 1.66e-247 asnA 6.3.1.1 - F ko:K01914 ko00250,ko00460,ko01100,ko01110,ko01230,map00250,map00460,map01100,map01110,map01230 ko00000,ko00001,ko01000 aspartate--ammonia ligase
BIBIDAFE_00062 1.34e-260 - 4.2.1.126 - S ko:K07106,ko:K09963 ko00520,ko01100,map00520,map01100 ko00000,ko00001,ko01000 Bacterial protein of unknown function (DUF871)
BIBIDAFE_00065 1.57e-234 guaC 1.7.1.7 - F ko:K00364 ko00230,map00230 ko00000,ko00001,ko01000 Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
BIBIDAFE_00066 0.0 purA 6.3.4.4 - F ko:K01939 ko00230,ko00250,ko01100,map00230,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
BIBIDAFE_00067 1.75e-313 purB 4.3.2.2 - F ko:K01756 ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
BIBIDAFE_00068 1.67e-74 - - - - - - - -
BIBIDAFE_00069 4.82e-113 - - - - - - - -
BIBIDAFE_00070 6.65e-92 yheS_2 - - S ko:K18231,ko:K19349 ko02010,map02010 br01600,ko00000,ko00001,ko01504,ko02000 ATPases associated with a variety of cellular activities
BIBIDAFE_00071 1.27e-87 yheS_2 - - S ko:K18231,ko:K19349 ko02010,map02010 br01600,ko00000,ko00001,ko01504,ko02000 ATPases associated with a variety of cellular activities
BIBIDAFE_00072 1.43e-223 - - - S - - - DUF218 domain
BIBIDAFE_00073 2.51e-102 - - - - - - - -
BIBIDAFE_00074 9.7e-140 - - - - - - - -
BIBIDAFE_00075 1.6e-175 - - - EG - - - EamA-like transporter family
BIBIDAFE_00076 1.61e-107 - - - M - - - NlpC/P60 family
BIBIDAFE_00077 3.13e-81 - - - M - - - Glycosyltransferase, group 2 family protein
BIBIDAFE_00078 1.41e-96 - - - M - - - Capsular polysaccharide synthesis protein
BIBIDAFE_00079 1.35e-101 - - - M - - - Glycosyltransferase, group 2 family protein
BIBIDAFE_00080 3.1e-209 cps4F - - M - - - Glycosyl transferases group 1
BIBIDAFE_00081 9.2e-156 epsE2 - - M - - - Bacterial sugar transferase
BIBIDAFE_00082 7.86e-134 - - - - - - - -
BIBIDAFE_00083 0.0 - - - S - - - O-antigen ligase like membrane protein
BIBIDAFE_00084 1.07e-49 - - - - - - - -
BIBIDAFE_00085 1.33e-123 gmk2 2.7.4.8 - F ko:K00942 ko00230,ko01100,map00230,map01100 ko00000,ko00001,ko00002,ko01000 Guanylate kinase homologues.
BIBIDAFE_00086 7.91e-117 - - - M ko:K21471 - ko00000,ko01000,ko01002,ko01011 NlpC/P60 family
BIBIDAFE_00087 2.54e-38 - - - S ko:K06921 - ko00000 Archaea bacterial proteins of unknown function
BIBIDAFE_00094 1.19e-279 - 2.4.1.337 GT4 M ko:K19002 ko00561,ko01100,map00561,map01100 ko00000,ko00001,ko01000,ko01003 Glycosyl transferase 4-like domain
BIBIDAFE_00095 5.23e-256 cpoA 2.4.1.208 GT4 M ko:K13677,ko:K13678 ko00561,ko01100,map00561,map01100 ko00000,ko00001,ko01000,ko01003 Glycosyltransferase, group 1 family protein
BIBIDAFE_00096 1.53e-224 mprF - - S ko:K07027 - ko00000,ko02000 Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
BIBIDAFE_00097 0.0 ltaS 2.7.8.20 - M ko:K19005 ko00561,ko01100,map00561,map01100 ko00000,ko00001,ko01000 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
BIBIDAFE_00098 1.3e-40 secG - - U ko:K03075 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Preprotein translocase
BIBIDAFE_00099 0.0 pepV 3.5.1.18 - E ko:K01270,ko:K01274,ko:K01439 ko00300,ko00480,ko01100,ko01120,ko01230,map00300,map00480,map01100,map01120,map01230 ko00000,ko00001,ko00002,ko01000,ko01002 dipeptidase PepV
BIBIDAFE_00100 1.4e-245 flp - - V - - - Beta-lactamase
BIBIDAFE_00101 0.0 ppc 4.1.1.31 - H ko:K01595 ko00620,ko00680,ko00710,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00710,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
BIBIDAFE_00102 6.28e-59 - - - - - - - -
BIBIDAFE_00103 2.21e-177 - - - - - - - -
BIBIDAFE_00104 1.37e-101 - - - K - - - Acetyltransferase (GNAT) domain
BIBIDAFE_00105 7.5e-86 - - - S - - - Protein of unknown function (DUF3021)
BIBIDAFE_00106 7.65e-101 - - - K - - - LytTr DNA-binding domain
BIBIDAFE_00107 1.42e-57 - - - - - - - -
BIBIDAFE_00108 1.35e-161 nth2 - - L ko:K07457 - ko00000 Base excision DNA repair protein, HhH-GPD family
BIBIDAFE_00109 8.76e-75 folB 1.13.11.81, 4.1.2.25, 5.1.99.8 - H ko:K01633 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
BIBIDAFE_00110 1.02e-258 folE 2.7.6.3, 3.5.4.16 - F ko:K00950,ko:K01495 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko00002,ko01000 GTP cyclohydrolase 1
BIBIDAFE_00111 1.87e-316 folC 6.3.2.12, 6.3.2.17 - H ko:K11754 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the folylpolyglutamate synthase family
BIBIDAFE_00112 7.12e-256 folP 2.5.1.15 - H ko:K00796 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko00002,ko01000 dihydropteroate synthase
BIBIDAFE_00113 2.7e-126 - 3.6.1.67 - F ko:K19965 ko00790,map00790 ko00000,ko00001,ko00002,ko01000 NUDIX domain
BIBIDAFE_00114 5.36e-65 hutG 3.5.3.8 - E ko:K01479 ko00340,ko01100,map00340,map01100 ko00000,ko00001,ko00002,ko01000 N-formylglutamate amidohydrolase
BIBIDAFE_00115 2.03e-34 - - - S - - - Uncharacterized protein conserved in bacteria (DUF2255)
BIBIDAFE_00116 1.32e-144 glnP9 - - P ko:K02029 - ko00000,ko00002,ko02000 ABC transporter, permease protein
BIBIDAFE_00117 1.39e-121 glnP7 - - P ko:K02029 - ko00000,ko00002,ko02000 ABC transporter permease
BIBIDAFE_00118 1.19e-174 glnQ 3.6.3.21 - E ko:K02028 - ko00000,ko00002,ko01000,ko02000 ABC transporter, ATP-binding protein
BIBIDAFE_00119 3.07e-206 cjaA - - ET ko:K02030 - ko00000,ko00002,ko02000 ABC transporter substrate-binding protein
BIBIDAFE_00120 1.47e-94 - - - L - - - Helix-turn-helix domain
BIBIDAFE_00121 8.28e-251 - - - L ko:K07497 - ko00000 hmm pf00665
BIBIDAFE_00122 7.6e-118 dpnM 2.1.1.72 - H ko:K06223 ko03430,map03430 ko00000,ko00001,ko01000,ko02048,ko03032,ko03400 Site-specific DNA-methyltransferase (adenine-specific)
BIBIDAFE_00124 1.36e-151 - - - L - - - Integrase
BIBIDAFE_00126 7.7e-198 B4168_4126 - - L ko:K07493 - ko00000 Transposase
BIBIDAFE_00127 2.78e-34 - - - S ko:K18231,ko:K19349 ko02010,map02010 br01600,ko00000,ko00001,ko01504,ko02000 ATPases associated with a variety of cellular activities
BIBIDAFE_00128 1.38e-250 - - - V ko:K06147,ko:K06148 - ko00000,ko02000 ABC-type multidrug transport system, ATPase and permease components
BIBIDAFE_00129 1.25e-74 - - - P ko:K06147,ko:K06148 - ko00000,ko02000 ABC transporter
BIBIDAFE_00130 4.36e-162 gpm2 - - G - - - Phosphoglycerate mutase family
BIBIDAFE_00131 1.79e-24 racD 5.1.1.13 - M ko:K01779 ko00250,ko01054,map00250,map01054 ko00000,ko00001,ko01000 Belongs to the aspartate glutamate racemases family
BIBIDAFE_00132 2.66e-308 - - - S - - - response to antibiotic
BIBIDAFE_00133 1.84e-162 - - - - - - - -
BIBIDAFE_00134 6.14e-106 pacL3 3.6.3.8 - P ko:K01537 - ko00000,ko01000 P-type ATPase
BIBIDAFE_00135 1.98e-27 pacL3 3.6.3.8 - P ko:K01537 - ko00000,ko01000 P-type ATPase
BIBIDAFE_00136 7.96e-120 pacL3 3.6.3.8 - P ko:K01537 - ko00000,ko01000 P-type ATPase
BIBIDAFE_00137 5.37e-29 - - - - - - - -
BIBIDAFE_00138 4.2e-21 - - - - - - - -
BIBIDAFE_00139 9.54e-241 ansA 3.5.1.1 - EJ ko:K01424 ko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110 ko00000,ko00001,ko01000 L-asparaginase, type I
BIBIDAFE_00140 1.47e-169 - - - K ko:K03481 - ko00000,ko03000 Helix-turn-helix domain, rpiR family
BIBIDAFE_00141 0.0 malH 3.2.1.122 GH4 G ko:K01232 ko00500,map00500 ko00000,ko00001,ko01000 Family 4 glycosyl hydrolase C-terminal domain
BIBIDAFE_00142 7.59e-31 - - - - - - - -
BIBIDAFE_00143 8.26e-60 - - - - - - - -
BIBIDAFE_00144 3.53e-123 - - - - - - - -
BIBIDAFE_00145 0.0 cadA - - P - - - P-type ATPase
BIBIDAFE_00146 1.34e-261 napA - - P - - - Sodium/hydrogen exchanger family
BIBIDAFE_00147 9e-66 - - - D ko:K19159 - ko00000,ko02048 Antitoxin component of a toxin-antitoxin (TA) module
BIBIDAFE_00148 3.93e-63 yoeB - - S ko:K19158 - ko00000,ko01000,ko02048 YoeB-like toxin of bacterial type II toxin-antitoxin system
BIBIDAFE_00149 0.0 - - - V ko:K06148 - ko00000,ko02000 ABC transporter transmembrane region
BIBIDAFE_00150 3.47e-07 - - - V ko:K06148 - ko00000,ko02000 ABC transporter transmembrane region
BIBIDAFE_00151 3.77e-114 - - - S - - - Putative adhesin
BIBIDAFE_00152 2.1e-205 mutR - - K - - - Helix-turn-helix XRE-family like proteins
BIBIDAFE_00153 1.83e-63 - - - - - - - -
BIBIDAFE_00154 2.61e-155 - - - S ko:K07052 - ko00000 CAAX protease self-immunity
BIBIDAFE_00155 3.1e-249 - - - S - - - DUF218 domain
BIBIDAFE_00156 2.93e-16 - - - V ko:K02003,ko:K02004 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
BIBIDAFE_00157 9.18e-54 - - - V ko:K02003,ko:K02004 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
BIBIDAFE_00158 0.0 - - - V ko:K02003,ko:K02004 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
BIBIDAFE_00159 1.47e-124 - - - S - - - ECF transporter, substrate-specific component
BIBIDAFE_00160 7.57e-207 - - - S - - - Aldo/keto reductase family
BIBIDAFE_00161 4.67e-173 nagB 3.5.99.6 - G ko:K02564 ko00520,ko01100,map00520,map01100 ko00000,ko00001,ko01000 Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
BIBIDAFE_00162 5.99e-26 - - - - - - - -
BIBIDAFE_00163 6.93e-85 - - - L ko:K07484 - ko00000 IS66 Orf2 like protein
BIBIDAFE_00164 1.3e-44 - - - S - - - Transposase C of IS166 homeodomain
BIBIDAFE_00165 0.0 - - - L ko:K07484 - ko00000 Transposase IS66 family
BIBIDAFE_00166 8.9e-51 - - - - - - - -
BIBIDAFE_00167 3.42e-71 patB 4.4.1.8 - E ko:K14155 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 ko00000,ko00001,ko01000,ko01007 Aminotransferase, class I
BIBIDAFE_00168 1.35e-114 patB 4.4.1.8 - E ko:K14155 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 ko00000,ko00001,ko01000,ko01007 Aminotransferase, class I
BIBIDAFE_00169 4.26e-75 - - - - - - - -
BIBIDAFE_00170 1.76e-313 brnQ - - U ko:K03311 - ko00000 Component of the transport system for branched-chain amino acids
BIBIDAFE_00172 9.14e-13 pepO - - O ko:K07386 - ko00000,ko01000,ko01002 Peptidase family M13
BIBIDAFE_00173 5.25e-37 - - - - - - - -
BIBIDAFE_00174 7.45e-54 ptsH - - G ko:K11189 - ko00000,ko02000 phosphocarrier protein HPR
BIBIDAFE_00175 0.0 ptsI 2.7.3.9 - G ko:K08483 ko02060,map02060 ko00000,ko00001,ko01000,ko02000 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
BIBIDAFE_00176 4.42e-87 spxA - - K ko:K16509 - ko00000 Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
BIBIDAFE_00177 3.54e-176 mecA - - NOT ko:K16511 - ko00000 Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
BIBIDAFE_00178 1.86e-204 coiA - - S ko:K06198 - ko00000 Competence protein
BIBIDAFE_00179 6.44e-145 yjbH - - Q - - - Thioredoxin
BIBIDAFE_00180 2.96e-145 - - - S - - - CYTH
BIBIDAFE_00181 4.88e-147 yjbM 2.7.6.5 - S ko:K07816 ko00230,map00230 ko00000,ko00001,ko01000 RelA SpoT domain protein
BIBIDAFE_00182 3.06e-198 nadK 2.7.1.23 - F ko:K00858 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko01000 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
BIBIDAFE_00183 2.87e-217 rluD2 5.4.99.23 - J ko:K06180 - ko00000,ko01000,ko03009 Responsible for synthesis of pseudouridine from uracil
BIBIDAFE_00184 1.75e-69 mycA 4.2.1.53 - S ko:K10254 - ko00000,ko01000 Myosin-crossreactive antigen
BIBIDAFE_00185 1.92e-207 galU 2.7.7.9 - M ko:K00963 ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130 ko00000,ko00001,ko00002,ko01000 UTP-glucose-1-phosphate uridylyltransferase
BIBIDAFE_00186 0.0 speA 4.1.1.17, 4.1.1.18, 4.1.1.19 - E ko:K01581,ko:K01582,ko:K01585 ko00310,ko00330,ko00480,ko00960,ko01100,ko01110,ko01130,map00310,map00330,map00480,map00960,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Orn/Lys/Arg decarboxylase, C-terminal domain
BIBIDAFE_00187 0.0 - - - E - - - Amino acid permease
BIBIDAFE_00188 3.27e-54 tnpA1 - - L - - - PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
BIBIDAFE_00189 1.81e-176 - - - S ko:K03328 - ko00000 Membrane protein involved in the export of O-antigen and teichoic acid
BIBIDAFE_00190 2.22e-80 - - - M - - - Glycosyltransferase like family 2
BIBIDAFE_00191 0.0 xfp 4.1.2.22, 4.1.2.9 - G ko:K01621 ko00030,ko00710,ko01100,ko01120,map00030,map00710,map01100,map01120 ko00000,ko00001,ko01000 Phosphoketolase
BIBIDAFE_00192 1.3e-205 - - - S - - - Phospholipase, patatin family
BIBIDAFE_00193 2.62e-193 yumC 1.18.1.2, 1.19.1.1 - C ko:K21567 - ko00000,ko01000 Ferredoxin--NADP reductase
BIBIDAFE_00194 1.19e-150 dedA - - S ko:K03975 - ko00000 SNARE-like domain protein
BIBIDAFE_00195 7.79e-115 - - - S - - - Protein of unknown function (DUF1461)
BIBIDAFE_00196 3.41e-185 nagD 3.1.3.41 - G ko:K01101 ko00627,ko01120,map00627,map01120 ko00000,ko00001,ko01000 Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
BIBIDAFE_00197 4.97e-130 yutD - - S - - - Protein of unknown function (DUF1027)
BIBIDAFE_00198 0.0 sasH 3.1.3.5, 3.1.3.6, 3.1.4.16, 3.6.1.45 - F ko:K01081,ko:K01119,ko:K07004,ko:K08693,ko:K11751 ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110 ko00000,ko00001,ko01000 Belongs to the 5'-nucleotidase family
BIBIDAFE_00199 9.89e-74 - - - - - - - -
BIBIDAFE_00200 0.0 - 3.1.4.46 - C ko:K01126 ko00564,map00564 ko00000,ko00001,ko01000 glycerophosphoryl diester phosphodiesterase
BIBIDAFE_00201 3.69e-233 ccpA - - K ko:K02529 - ko00000,ko03000 catabolite control protein A
BIBIDAFE_00202 4.99e-276 pepQ 3.4.13.9 - E ko:K01271 - ko00000,ko01000,ko01002 Creatinase/Prolidase N-terminal domain
BIBIDAFE_00203 5.04e-71 - - - - - - - -
BIBIDAFE_00204 5.02e-69 - - - L - - - An automated process has identified a potential problem with this gene model
BIBIDAFE_00205 9.17e-53 oppA - - E ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter
BIBIDAFE_00206 1.95e-94 oppA - - E ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter
BIBIDAFE_00207 7.93e-124 - - - Q - - - Imidazolonepropionase and related amidohydrolases
BIBIDAFE_00208 4.58e-96 - - - Q - - - Imidazolonepropionase and related amidohydrolases
BIBIDAFE_00211 2.33e-282 galK 2.7.1.6 - F ko:K00849 ko00052,ko00520,ko01100,map00052,map00520,map01100 ko00000,ko00001,ko00002,ko01000,ko04147 Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
BIBIDAFE_00212 0.0 galT 2.7.7.12 - G ko:K00965 ko00052,ko00520,ko01100,ko04917,map00052,map00520,map01100,map04917 ko00000,ko00001,ko00002,ko01000 UDP-glucose--hexose-1-phosphate uridylyltransferase
BIBIDAFE_00213 9.68e-253 galM 5.1.3.3 - G ko:K01785 ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the interconversion of alpha and beta anomers of maltose
BIBIDAFE_00214 2.14e-96 - - - S - - - SLAP domain
BIBIDAFE_00215 8.54e-147 - - - S - - - SLAP domain
BIBIDAFE_00216 9.11e-43 - - - L - - - An automated process has identified a potential problem with this gene model
BIBIDAFE_00217 5.7e-60 - - - L - - - An automated process has identified a potential problem with this gene model
BIBIDAFE_00218 2.82e-45 dltr - - K - - - response regulator
BIBIDAFE_00219 5.1e-78 sptS - - T - - - Histidine kinase
BIBIDAFE_00220 1.2e-148 sptS - - T - - - Histidine kinase
BIBIDAFE_00221 1.58e-265 - - - EGP - - - Major Facilitator Superfamily
BIBIDAFE_00222 1.83e-18 - - - O - - - OsmC-like protein
BIBIDAFE_00223 2.12e-49 - - - O - - - OsmC-like protein
BIBIDAFE_00224 1.82e-164 - - - S - - - L-ascorbic acid biosynthetic process
BIBIDAFE_00225 1.9e-286 - - - V - - - ABC transporter transmembrane region
BIBIDAFE_00226 2.04e-151 - - - L - - - Psort location Cytoplasmic, score
BIBIDAFE_00230 5.59e-251 xseA 3.1.11.6 - L ko:K03601 ko03430,map03430 ko00000,ko00001,ko01000,ko03400 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
BIBIDAFE_00231 4.4e-47 xseB 3.1.11.6 - L ko:K03602 ko03430,map03430 ko00000,ko00001,ko01000,ko03400 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
BIBIDAFE_00232 6.71e-207 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29 - H ko:K13789 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000,ko01006 Belongs to the FPP GGPP synthase family
BIBIDAFE_00233 8.78e-198 rrmJ 2.1.1.226, 2.1.1.227 - J ko:K06442 - ko00000,ko01000,ko03009 Ribosomal RNA large subunit methyltransferase J
BIBIDAFE_00234 0.0 recN - - L ko:K03631 - ko00000,ko03400 May be involved in recombinational repair of damaged DNA
BIBIDAFE_00235 3.93e-28 - - - S - - - ASCH
BIBIDAFE_00236 6.84e-57 - - - S - - - ASCH
BIBIDAFE_00237 7.26e-146 gmk 2.7.4.8 - F ko:K00942 ko00230,ko01100,map00230,map01100 ko00000,ko00001,ko00002,ko01000 Essential for recycling GMP and indirectly, cGMP
BIBIDAFE_00238 1.67e-46 rpoZ 2.7.7.6 - K ko:K03060 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
BIBIDAFE_00239 0.0 priA - - L ko:K04066 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
BIBIDAFE_00240 9.69e-224 fmt 2.1.2.9 - J ko:K00604 ko00670,ko00970,map00670,map00970 ko00000,ko00001,ko01000 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
BIBIDAFE_00241 1.81e-314 sun 2.1.1.176 - J ko:K03500 - ko00000,ko01000,ko03009 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
BIBIDAFE_00242 8.11e-190 stp 3.1.3.16 - T ko:K20074 - ko00000,ko01000,ko01009 phosphatase
BIBIDAFE_00243 0.0 prkC 2.7.11.1 - KLT ko:K08884,ko:K12132 - ko00000,ko01000,ko01001 serine threonine protein kinase
BIBIDAFE_00244 1.59e-213 rsgA 3.1.3.100 - S ko:K06949 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko01000,ko03009 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
BIBIDAFE_00245 5.06e-152 rpe 5.1.3.1 - G ko:K01783 ko00030,ko00040,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the ribulose-phosphate 3-epimerase family
BIBIDAFE_00246 8.07e-164 thiN 2.7.6.2 - H ko:K00949 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko01000 thiamine pyrophosphokinase
BIBIDAFE_00247 1.06e-68 - - - - - - - -
BIBIDAFE_00248 1.33e-35 rpmB - - J ko:K02902 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL28 family
BIBIDAFE_00249 7.69e-44 tnpA1 - - L - - - PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
BIBIDAFE_00250 9.05e-222 - - - V - - - ABC transporter transmembrane region
BIBIDAFE_00252 3.74e-200 - - - KLT - - - Protein kinase domain
BIBIDAFE_00253 0.0 citP - - P ko:K03319 - ko00000 Sodium:sulfate symporter transmembrane region
BIBIDAFE_00254 4.36e-199 - - - I - - - Alpha/beta hydrolase family
BIBIDAFE_00255 4.99e-251 citC 6.2.1.22 - H ko:K01910 ko02020,map02020 ko00000,ko00001,ko01000 Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
BIBIDAFE_00256 2.27e-59 citD - - C ko:K01646 ko02020,map02020 ko00000,ko00001 Covalent carrier of the coenzyme of citrate lyase
BIBIDAFE_00257 2.18e-215 citE 4.1.3.34 - G ko:K01644 ko02020,map02020 ko00000,ko00001,ko01000 Belongs to the HpcH HpaI aldolase family
BIBIDAFE_00258 0.0 citF 2.8.3.10 - H ko:K01643 ko02020,map02020 ko00000,ko00001,ko01000 Citrate (pro-3S)-lyase alpha chain
BIBIDAFE_00259 1.6e-132 - - - - - - - -
BIBIDAFE_00260 1.64e-191 - 3.1.3.48 - T ko:K01104 - ko00000,ko01000 Tyrosine phosphatase family
BIBIDAFE_00261 5.07e-63 glpK 2.7.1.30 - F ko:K00864 ko00561,ko01100,ko03320,ko04626,map00561,map01100,map03320,map04626 ko00000,ko00001,ko01000,ko04147 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
BIBIDAFE_00262 8.44e-112 glpK 2.7.1.30 - F ko:K00864 ko00561,ko01100,ko03320,ko04626,map00561,map01100,map03320,map04626 ko00000,ko00001,ko01000,ko04147 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
BIBIDAFE_00263 1.67e-103 glpK 2.7.1.30 - F ko:K00864 ko00561,ko01100,ko03320,ko04626,map00561,map01100,map03320,map04626 ko00000,ko00001,ko01000,ko04147 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
BIBIDAFE_00264 3.43e-195 thiD 2.7.1.49, 2.7.4.7 - H ko:K00941 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko00002,ko01000 Phosphomethylpyrimidine kinase
BIBIDAFE_00266 1.57e-170 cobQ - - S ko:K07009 - ko00000 glutamine amidotransferase
BIBIDAFE_00267 3.01e-313 - - - S ko:K12941 - ko00000,ko01002 Peptidase dimerisation domain
BIBIDAFE_00268 1.65e-178 - - - S - - - Protein of unknown function (DUF3100)
BIBIDAFE_00269 2.02e-107 - - - S - - - An automated process has identified a potential problem with this gene model
BIBIDAFE_00270 3.09e-33 - - - - - - - -
BIBIDAFE_00271 7.25e-41 - - - S - - - Pyridoxamine 5'-phosphate oxidase
BIBIDAFE_00272 6.83e-103 yobV3 - - K - - - WYL domain
BIBIDAFE_00273 2.41e-25 yobV3 - - K - - - WYL domain
BIBIDAFE_00274 1.4e-57 - - - S - - - pyridoxamine 5-phosphate
BIBIDAFE_00275 0.0 npr 1.11.1.1 - C ko:K05910 - ko00000,ko01000 NADH oxidase
BIBIDAFE_00276 5.68e-156 - - - K - - - Transcriptional regulator
BIBIDAFE_00277 6.55e-74 - 2.7.7.49 - L ko:K00986 - ko00000,ko01000 PFAM RNA-directed DNA polymerase (Reverse transcriptase)
BIBIDAFE_00278 5.53e-75 prtP 3.4.21.96 - O ko:K01361 - ko00000,ko01000,ko01002,ko03110 Belongs to the peptidase S8 family
BIBIDAFE_00279 0.0 XK27_11280 - - S - - - Psort location CytoplasmicMembrane, score
BIBIDAFE_00280 1.34e-233 ackA 2.7.2.1 - F ko:K00925 ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
BIBIDAFE_00282 0.0 pepO - - O ko:K07386 - ko00000,ko01000,ko01002 Peptidase family M13
BIBIDAFE_00283 3.5e-93 - - - S - - - Enterocin A Immunity
BIBIDAFE_00284 4.24e-144 - - - S ko:K06921 - ko00000 Archaea bacterial proteins of unknown function
BIBIDAFE_00285 6.67e-187 racD 5.1.1.13 - M ko:K01779 ko00250,ko01054,map00250,map01054 ko00000,ko00001,ko01000 Belongs to the aspartate glutamate racemases family
BIBIDAFE_00286 0.0 murE 6.3.2.13, 6.3.2.7 - M ko:K01928,ko:K05362 ko00300,ko00550,ko01100,map00300,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
BIBIDAFE_00287 3.1e-268 - - - T - - - His Kinase A (phosphoacceptor) domain
BIBIDAFE_00288 2.9e-157 vanR - - K - - - response regulator
BIBIDAFE_00289 0.0 ndvA - - V ko:K06147 - ko00000,ko02000 ABC transporter
BIBIDAFE_00290 0.0 - - - V ko:K06147,ko:K06148 - ko00000,ko02000 ABC transporter, ATP-binding protein
BIBIDAFE_00291 4.62e-179 - - - S - - - Protein of unknown function (DUF1129)
BIBIDAFE_00292 4.85e-257 ychF - - J ko:K06942 - ko00000,ko03009 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
BIBIDAFE_00293 6.38e-59 yyzM - - S - - - Bacterial protein of unknown function (DUF951)
BIBIDAFE_00294 1.96e-197 spo0J - - K ko:K03497 - ko00000,ko03000,ko03036,ko04812 Belongs to the ParB family
BIBIDAFE_00295 1.43e-177 soj - - D ko:K03496 - ko00000,ko03036,ko04812 Sporulation initiation inhibitor
BIBIDAFE_00296 3.28e-193 noc - - K ko:K03497 - ko00000,ko03000,ko03036,ko04812 Belongs to the ParB family
BIBIDAFE_00297 6.6e-169 rsmG 2.1.1.170 - J ko:K03501 - ko00000,ko01000,ko03009,ko03036 Specifically methylates the N7 position of a guanine in 16S rRNA
BIBIDAFE_00298 2.12e-114 cvpA - - S - - - Colicin V production protein
BIBIDAFE_00299 7.75e-232 apbE 2.7.1.180 - H ko:K03734 - ko00000,ko01000 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
BIBIDAFE_00300 7.79e-193 - 3.1.3.48 - T ko:K01104 - ko00000,ko01000 Tyrosine phosphatase family
BIBIDAFE_00301 4.46e-127 azr 1.5.1.36 - S ko:K22394 ko00740,ko01100,map00740,map01100 ko00000,ko00001,ko01000 NADPH-dependent FMN reductase
BIBIDAFE_00302 1.45e-126 azo1 1.5.1.36, 1.7.1.6 - S ko:K03206,ko:K19784,ko:K22393 ko00740,ko01100,map00740,map01100 ko00000,ko00001,ko01000 NADPH-dependent FMN reductase
BIBIDAFE_00303 3.66e-144 - - - K - - - WHG domain
BIBIDAFE_00304 1.74e-128 - - - - - - - -
BIBIDAFE_00305 4.12e-35 - - - - - - - -
BIBIDAFE_00306 4.56e-135 - - - - - - - -
BIBIDAFE_00307 4.11e-32 - - - S ko:K07150 - ko00000 Protein of unknown function (DUF554)
BIBIDAFE_00308 5.35e-287 brpA - - K - - - Cell envelope-like function transcriptional attenuator common domain protein
BIBIDAFE_00309 0.0 pepF - - E ko:K08602 - ko00000,ko01000,ko01002 oligoendopeptidase F
BIBIDAFE_00310 2.06e-12 - - - S - - - Fic/DOC family
BIBIDAFE_00311 1.01e-47 - - - D - - - Filamentation induced by cAMP protein fic
BIBIDAFE_00312 2.66e-57 - - - S - - - Enterocin A Immunity
BIBIDAFE_00313 8.67e-64 lctP - - C ko:K03303 - ko00000,ko02000 L-lactate permease
BIBIDAFE_00314 4.88e-111 lctP - - C ko:K03303 - ko00000,ko02000 L-lactate permease
BIBIDAFE_00315 1.83e-27 lctP - - C ko:K03303 - ko00000,ko02000 L-lactate permease
BIBIDAFE_00318 4.89e-182 - - - M - - - Phosphotransferase enzyme family
BIBIDAFE_00319 1.19e-100 - - - - - - - -
BIBIDAFE_00321 1.41e-90 gntR - - K - - - UbiC transcription regulator-associated domain protein
BIBIDAFE_00322 9.58e-28 gntR - - K - - - UbiC transcription regulator-associated domain protein
BIBIDAFE_00323 6.08e-224 rihC 3.2.2.1 - F ko:K01239,ko:K01250,ko:K12700 ko00230,ko00760,ko01100,map00230,map00760,map01100 ko00000,ko00001,ko01000 Nucleoside
BIBIDAFE_00324 0.0 kup - - P ko:K03549 - ko00000,ko02000 Transport of potassium into the cell
BIBIDAFE_00325 3.83e-163 rpiA 5.3.1.6 - G ko:K01807 ko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
BIBIDAFE_00326 1.47e-215 rbsK 2.7.1.15 - H ko:K00852 ko00030,map00030 ko00000,ko00001,ko01000 Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BIBIDAFE_00327 1.26e-209 - - - C - - - Domain of unknown function (DUF4931)
BIBIDAFE_00328 0.0 lysA 4.1.1.20 - E ko:K01586 ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
BIBIDAFE_00329 2.94e-108 dapH 2.3.1.117, 2.3.1.89 - E ko:K00674,ko:K05822 ko00300,ko01100,ko01110,ko01120,ko01230,map00300,map01100,map01110,map01120,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
BIBIDAFE_00330 5.69e-281 hipO 3.5.1.47 - E ko:K05823 ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000,ko01002 Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
BIBIDAFE_00331 1.14e-225 dapA 4.3.3.7 - E ko:K01714 ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
BIBIDAFE_00332 6.89e-185 dapB 1.17.1.8 - E ko:K00215 ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
BIBIDAFE_00333 1.24e-277 aspC - - E ko:K00841 ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Aminotransferase
BIBIDAFE_00334 6.35e-255 asd 1.2.1.11 - E ko:K00133 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
BIBIDAFE_00335 1.85e-35 pckA 4.1.1.49 - H ko:K01610 ko00010,ko00020,ko00620,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00710,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Phosphoenolpyruvate carboxykinase
BIBIDAFE_00336 8.47e-129 pckA 4.1.1.49 - H ko:K01610 ko00010,ko00020,ko00620,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00710,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Phosphoenolpyruvate carboxykinase
BIBIDAFE_00337 1.26e-114 pckA 4.1.1.49 - H ko:K01610 ko00010,ko00020,ko00620,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00710,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Phosphoenolpyruvate carboxykinase
BIBIDAFE_00338 7.52e-95 apfA 3.6.1.61 - F ko:K18445 ko00230,map00230 ko00000,ko00001,ko01000 Nudix hydrolase
BIBIDAFE_00339 1.85e-48 - - - - - - - -
BIBIDAFE_00340 2.68e-171 - 4.1.1.44 - S ko:K01607 ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220 ko00000,ko00001,ko01000 Carboxymuconolactone decarboxylase family
BIBIDAFE_00341 4.53e-283 ackA 2.7.2.1 - F ko:K00925 ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
BIBIDAFE_00342 5.92e-63 tnpA1 - - L - - - PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
BIBIDAFE_00345 3.34e-197 - - - M ko:K21471 - ko00000,ko01000,ko01002,ko01011 NlpC/P60 family
BIBIDAFE_00346 5.14e-19 - - - S - - - Fic/DOC family
BIBIDAFE_00347 8.65e-310 - - - L - - - Probable transposase
BIBIDAFE_00348 4.84e-44 - - - T ko:K07171 - ko00000,ko01000,ko02048 PemK-like, MazF-like toxin of type II toxin-antitoxin system
BIBIDAFE_00349 1.06e-57 - - - - - - - -
BIBIDAFE_00350 8.86e-62 - - - K - - - Helix-turn-helix XRE-family like proteins
BIBIDAFE_00351 8.32e-37 - - - S - - - Uncharacterised protein, DegV family COG1307
BIBIDAFE_00352 5.94e-119 - - - S - - - Uncharacterised protein, DegV family COG1307
BIBIDAFE_00353 6.08e-312 eno 4.2.1.11 - G ko:K01689 ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066 ko00000,ko00001,ko00002,ko01000,ko03019,ko04147 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
BIBIDAFE_00354 1.7e-102 - - - S - - - Domain of unknown function (DUF4767)
BIBIDAFE_00355 2.03e-111 yfhC - - C - - - nitroreductase
BIBIDAFE_00356 5.95e-14 ypbG 2.7.1.2 - GK ko:K00845 ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 ROK family
BIBIDAFE_00357 4.37e-102 ypbG 2.7.1.2 - GK ko:K00845 ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 ROK family
BIBIDAFE_00358 0.0 pbg6 3.2.1.86 GT1 G ko:K01223 ko00010,ko00500,map00010,map00500 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 1 family
BIBIDAFE_00359 1.7e-171 pts23C - - G ko:K02761 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko02000 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
BIBIDAFE_00360 7.28e-26 - - - - - - - -
BIBIDAFE_00361 4.79e-59 - - - V - - - ABC transporter transmembrane region
BIBIDAFE_00362 2.97e-115 - - - V ko:K06148 - ko00000,ko02000 ABC transporter transmembrane region
BIBIDAFE_00364 7.93e-249 tcsA - - S ko:K02058,ko:K07335 - ko00000,ko00002,ko02000 ABC transporter substrate-binding protein PnrA-like
BIBIDAFE_00365 0.0 mglA 3.6.3.17 - S ko:K02056,ko:K06400 - ko00000,ko00002,ko01000,ko02000 ABC transporter
BIBIDAFE_00366 4.4e-268 mglC - - S ko:K02057 - ko00000,ko00002,ko02000 Belongs to the binding-protein-dependent transport system permease family
BIBIDAFE_00367 6.28e-222 yufQ - - S ko:K02057 - ko00000,ko00002,ko02000 Belongs to the binding-protein-dependent transport system permease family
BIBIDAFE_00368 3.22e-184 - - - K - - - SIS domain
BIBIDAFE_00369 9.1e-44 psd 4.1.1.65 - I ko:K01613 ko00564,ko01100,ko01110,map00564,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Belongs to the phosphatidylserine decarboxylase family
BIBIDAFE_00370 5.22e-65 pspC - - KT ko:K03973 - ko00000,ko02048,ko03000 PspC domain
BIBIDAFE_00372 1.81e-310 dacA 3.4.16.4 - M ko:K07258 ko00550,ko01100,map00550,map01100 ko00000,ko00001,ko01000,ko01002,ko01011 Belongs to the peptidase S11 family
BIBIDAFE_00373 1.29e-196 nnrD 4.2.1.136, 5.1.99.6 - H ko:K17758,ko:K17759 - ko00000,ko01000 Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
BIBIDAFE_00374 9.06e-159 - - - M - - - ErfK YbiS YcfS YnhG
BIBIDAFE_00375 1.61e-102 padR - - K - - - Virulence activator alpha C-term
BIBIDAFE_00376 2.62e-136 padC - - Q ko:K13727 - ko00000,ko01000 Phenolic acid decarboxylase
BIBIDAFE_00377 2.44e-148 - - - S - - - PD-(D/E)XK nuclease family transposase
BIBIDAFE_00379 0.0 argS 6.1.1.19 - J ko:K01887 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Arginyl-tRNA synthetase
BIBIDAFE_00380 5.75e-89 - - - S - - - Protein of unknown function (DUF3290)
BIBIDAFE_00381 2.82e-182 pnuC - - H ko:K03811 - ko00000,ko02000 nicotinamide mononucleotide transporter
BIBIDAFE_00382 4.1e-23 - - - - - - - -
BIBIDAFE_00383 0.0 - - - V - - - ABC transporter transmembrane region
BIBIDAFE_00384 2.91e-229 pepR 3.4.11.5 - E ko:K01259 ko00330,map00330 ko00000,ko00001,ko01000,ko01002 Releases the N-terminal proline from various substrates
BIBIDAFE_00385 1.25e-240 add 3.5.4.2, 3.5.4.4 - F ko:K01488,ko:K02029,ko:K21053 ko00230,ko01100,ko05340,map00230,map01100,map05340 ko00000,ko00001,ko00002,ko01000,ko02000 Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
BIBIDAFE_00386 2.65e-123 - - - F - - - Nucleoside 2-deoxyribosyltransferase
BIBIDAFE_00388 1.55e-89 - - - S - - - Peptidase propeptide and YPEB domain
BIBIDAFE_00389 1.18e-276 - - - G ko:K02027 - ko00000,ko00002,ko02000 Bacterial extracellular solute-binding protein
BIBIDAFE_00390 9.65e-135 efp - - J ko:K02356 - ko00000,ko03012 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
BIBIDAFE_00391 1.17e-220 coaA 2.7.1.33 - F ko:K00867 ko00770,ko01100,map00770,map01100 ko00000,ko00001,ko00002,ko01000 Pantothenic acid kinase
BIBIDAFE_00392 2.72e-42 - - - K - - - Helix-turn-helix domain
BIBIDAFE_00393 5.48e-118 rlmH 2.1.1.177 - J ko:K00783 - ko00000,ko01000,ko03009 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
BIBIDAFE_00394 6.11e-277 htrA 3.4.21.107 - O ko:K04771 ko01503,ko02020,map01503,map02020 ko00000,ko00001,ko00002,ko01000,ko01002,ko03110 serine protease
BIBIDAFE_00395 6.15e-191 vicX 3.1.26.11 - S ko:K00784 ko03013,map03013 ko00000,ko00001,ko01000,ko03016 domain protein
BIBIDAFE_00396 1.29e-192 yycI - - S - - - YycH protein
BIBIDAFE_00397 5.55e-316 yycH - - S - - - YycH protein
BIBIDAFE_00398 0.0 vicK 2.7.13.3 - T ko:K07652 ko02020,map02020 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Histidine kinase
BIBIDAFE_00399 4.65e-168 yycF - - K ko:K07668 ko02020,map02020 ko00000,ko00001,ko00002,ko02022 response regulator
BIBIDAFE_00401 4.46e-46 - - - - - - - -
BIBIDAFE_00404 1.03e-214 - - - S - - - SLAP domain
BIBIDAFE_00405 3.44e-134 - - - - - - - -
BIBIDAFE_00407 7.21e-149 - - - K - - - helix_turn_helix, mercury resistance
BIBIDAFE_00408 3.2e-121 - - - K - - - Acetyltransferase (GNAT) domain
BIBIDAFE_00409 0.0 uvrA2 - - L ko:K03701 ko03420,map03420 ko00000,ko00001,ko03400 excinuclease ABC, A subunit
BIBIDAFE_00411 9.93e-108 - 3.6.1.66 - F ko:K02428 ko00230,map00230 ko00000,ko00001,ko01000 Ham1 family
BIBIDAFE_00413 3.53e-227 - - - P ko:K02077 - ko00000,ko00002,ko02000 Belongs to the bacterial solute-binding protein 9 family
BIBIDAFE_00416 1.06e-279 metK 2.5.1.6 - H ko:K00789 ko00270,ko01100,ko01110,ko01230,map00270,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
BIBIDAFE_00417 0.0 mdr - - EGP - - - Major Facilitator
BIBIDAFE_00418 6.31e-81 - 2.1.1.113 - L ko:K00590 - ko00000,ko01000,ko02048 Belongs to the N(4) N(6)-methyltransferase family
BIBIDAFE_00419 0.000136 - 2.1.1.72 - L ko:K07319 - ko00000,ko01000,ko02048 DNA methylase
BIBIDAFE_00420 1.06e-25 - - - - - - - -
BIBIDAFE_00421 3.1e-206 - - - M - - - domain protein
BIBIDAFE_00422 1.22e-89 yslB - - S - - - Protein of unknown function (DUF2507)
BIBIDAFE_00423 2.92e-190 murI 3.6.1.66, 5.1.1.3 - M ko:K01776,ko:K02428 ko00230,ko00471,ko01100,map00230,map00471,map01100 ko00000,ko00001,ko01000,ko01011 Provides the (R)-glutamate required for cell wall biosynthesis
BIBIDAFE_00424 1.85e-149 rdgB 3.6.1.66 - F ko:K02428 ko00230,map00230 ko00000,ko00001,ko01000 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
BIBIDAFE_00425 7.18e-190 - - - L - - - Transposase
BIBIDAFE_00426 5.44e-170 ycaM - - E - - - amino acid
BIBIDAFE_00427 2.36e-72 ycaM - - E - - - amino acid
BIBIDAFE_00428 1.11e-196 supH - - S - - - haloacid dehalogenase-like hydrolase
BIBIDAFE_00429 0.0 - - - S - - - SH3-like domain
BIBIDAFE_00430 6.07e-264 - - - G - - - Major Facilitator Superfamily
BIBIDAFE_00431 2.32e-170 aroF 2.5.1.54 - E ko:K03856 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 DAHP synthetase I family
BIBIDAFE_00432 1.81e-167 aroB 4.2.3.4 - E ko:K01735 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
BIBIDAFE_00435 7.05e-144 aroE 1.1.1.25 - E ko:K00014 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
BIBIDAFE_00436 1.17e-65 aroD 4.2.1.10 - E ko:K03785 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis-dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3- dehydroshikimate
BIBIDAFE_00438 7.28e-209 rluA 5.4.99.23, 5.4.99.28, 5.4.99.29 - J ko:K06177,ko:K06180 - ko00000,ko01000,ko03009,ko03016 Responsible for synthesis of pseudouridine from uracil
BIBIDAFE_00439 0.0 pbp2A 2.4.1.129, 3.4.16.4 GT51 M ko:K12555 ko00550,ko01100,ko01501,map00550,map01100,map01501 ko00000,ko00001,ko01000,ko01003,ko01011 penicillin-binding protein
BIBIDAFE_00440 2.94e-73 yheA - - S - - - Belongs to the UPF0342 family
BIBIDAFE_00441 6.08e-294 yhaO - - L ko:K03547 - ko00000,ko03400 Ser Thr phosphatase family protein
BIBIDAFE_00442 0.0 yhaN - - L - - - AAA domain
BIBIDAFE_00443 7.83e-240 yhaM - - S ko:K03698 - ko00000,ko01000,ko03019 Metal dependent phosphohydrolases with conserved 'HD' motif.
BIBIDAFE_00444 5.09e-68 XK27_04775 - - S ko:K09155 - ko00000 PAS domain
BIBIDAFE_00446 9.7e-190 - - - L ko:K07496 - ko00000 transposase, IS605 OrfB family
BIBIDAFE_00448 2.17e-51 srtA 3.4.22.70 - M ko:K07284 - ko00000,ko01000,ko01002,ko01011 sortase family
BIBIDAFE_00449 0.0 recQ 3.6.4.12 - L ko:K03654 ko03018,map03018 ko00000,ko00001,ko01000,ko03400 ATP-dependent DNA helicase RecQ
BIBIDAFE_00450 2.35e-106 - - - C - - - Flavodoxin
BIBIDAFE_00451 6.65e-145 - - - I - - - Acid phosphatase homologues
BIBIDAFE_00452 1.71e-144 maa3 2.3.1.79 - S ko:K00661 - ko00000,ko01000 transferase hexapeptide repeat
BIBIDAFE_00453 1.07e-264 - - - V - - - Beta-lactamase
BIBIDAFE_00454 3.23e-141 pdxK 2.7.1.35 - H ko:K00868 ko00750,ko01100,map00750,map01100 ko00000,ko00001,ko01000 Phosphomethylpyrimidine kinase
BIBIDAFE_00455 1.03e-25 pdxK 2.7.1.35 - H ko:K00868 ko00750,ko01100,map00750,map01100 ko00000,ko00001,ko01000 Phosphomethylpyrimidine kinase
BIBIDAFE_00456 4.96e-121 - - - S - - - ECF-type riboflavin transporter, S component
BIBIDAFE_00457 1.43e-294 - - - S - - - Putative peptidoglycan binding domain
BIBIDAFE_00458 2.12e-241 mepA - - V ko:K18908 - ko00000,ko00002,ko01504,ko02000 MATE efflux family protein
BIBIDAFE_00459 0.0 pepT 3.4.11.4 - E ko:K01258 - ko00000,ko01000,ko01002 Cleaves the N-terminal amino acid of tripeptides
BIBIDAFE_00460 1.17e-46 - - - - - - - -
BIBIDAFE_00461 4.01e-80 - - - - - - - -
BIBIDAFE_00462 4.77e-118 - - - - - - - -
BIBIDAFE_00463 6.44e-90 - - - - - - - -
BIBIDAFE_00464 1.54e-141 - - - S - - - Fic/DOC family
BIBIDAFE_00465 1.17e-132 - - - - - - - -
BIBIDAFE_00466 4.04e-265 - - - EGP - - - Major Facilitator Superfamily
BIBIDAFE_00467 5.26e-173 - - - - - - - -
BIBIDAFE_00468 5.46e-74 - - - - - - - -
BIBIDAFE_00469 6.41e-106 - - - K - - - Acetyltransferase (GNAT) domain
BIBIDAFE_00471 1.31e-86 codA - - F - - - Cytidine and deoxycytidylate deaminase zinc-binding region
BIBIDAFE_00472 1.51e-185 - - - F - - - Phosphorylase superfamily
BIBIDAFE_00473 3.74e-154 yjhB 3.6.1.13 - F ko:K01515 ko00230,map00230 ko00000,ko00001,ko01000 NUDIX domain
BIBIDAFE_00475 2.68e-84 - - - - - - - -
BIBIDAFE_00476 4.96e-108 - - - S - - - Domain of unknown function (DUF5067)
BIBIDAFE_00477 4.68e-97 - - - L ko:K07497 - ko00000 COG2963 Transposase and inactivated derivatives
BIBIDAFE_00478 4.56e-66 - - - L - - - An automated process has identified a potential problem with this gene model
BIBIDAFE_00479 5.08e-198 - 3.1.3.102, 3.1.3.104 - S ko:K20861 ko00740,ko01100,ko01110,map00740,map01100,map01110 ko00000,ko00001,ko00002,ko01000 hydrolase
BIBIDAFE_00480 1.84e-63 - 2.3.1.81 - V ko:K00662 - ko00000,ko01000,ko01504 Aminoglycoside 3-N-acetyltransferase
BIBIDAFE_00481 5.65e-176 - - - S - - - YSIRK type signal peptide
BIBIDAFE_00482 4.72e-16 - - - M - - - domain protein
BIBIDAFE_00484 4.04e-70 - - - M - - - domain protein
BIBIDAFE_00486 0.0 frdA 1.3.5.4 - C ko:K00244 ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020 ko00000,ko00001,ko00002,ko01000 FAD binding domain
BIBIDAFE_00487 0.0 fumC 4.2.1.2 - C ko:K01679 ko00020,ko00620,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko04934,ko05200,ko05211,map00020,map00620,map00720,map01100,map01110,map01120,map01130,map01200,map04934,map05200,map05211 ko00000,ko00001,ko00002,ko01000 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
BIBIDAFE_00488 4.08e-47 - - - - - - - -
BIBIDAFE_00489 6.53e-80 - - - S ko:K07133 - ko00000 cog cog1373
BIBIDAFE_00490 2.53e-96 - - - S ko:K07133 - ko00000 cog cog1373
BIBIDAFE_00491 4.88e-131 metI - - P ko:K02072 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter permease
BIBIDAFE_00492 1.52e-242 metN - - P ko:K02071 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
BIBIDAFE_00493 9.19e-208 metQ - - P ko:K02073 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Belongs to the nlpA lipoprotein family
BIBIDAFE_00494 0.0 aha1 - - P ko:K12952 - ko00000,ko01000 E1-E2 ATPase
BIBIDAFE_00495 1.71e-143 - - - K - - - Transcriptional regulator, LysR family
BIBIDAFE_00496 5.04e-47 - - - S - - - Cytochrome b5
BIBIDAFE_00497 1.6e-214 arbZ - - I - - - Phosphate acyltransferases
BIBIDAFE_00498 2.73e-195 - - - M - - - Glycosyl transferase family 8
BIBIDAFE_00499 1.29e-13 - - - M - - - Glycosyl transferase family 8
BIBIDAFE_00500 1.07e-238 - - - M - - - Glycosyl transferase family 8
BIBIDAFE_00501 7.53e-203 arbx - - M - - - Glycosyl transferase family 8
BIBIDAFE_00502 3.95e-17 - - - K - - - Helix-turn-helix domain
BIBIDAFE_00503 2.05e-112 - - - K - - - Helix-turn-helix domain
BIBIDAFE_00504 8.43e-19 - - - - - - - -
BIBIDAFE_00505 1.23e-87 - - - - - - - -
BIBIDAFE_00506 7.51e-190 - - - I - - - Acyl-transferase
BIBIDAFE_00507 1.19e-256 - - - S - - - SLAP domain
BIBIDAFE_00508 3.07e-23 - - - - - - - -
BIBIDAFE_00509 0.0 ltaS 2.7.8.20 - M ko:K19005 ko00561,ko01100,map00561,map01100 ko00000,ko00001,ko01000 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
BIBIDAFE_00510 4.52e-140 vanZ - - V - - - VanZ like family
BIBIDAFE_00511 0.0 pgi 5.3.1.9 - G ko:K01810 ko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the GPI family
BIBIDAFE_00512 8.06e-149 - - - EGP - - - Major Facilitator
BIBIDAFE_00513 1.84e-166 mdlA - - V ko:K06148,ko:K18889 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter
BIBIDAFE_00514 3.12e-209 tnpA1 - - L - - - PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
BIBIDAFE_00515 8.14e-125 - 2.3.1.183 - M ko:K03823 ko00440,ko01130,map00440,map01130 ko00000,ko00001,ko01000 acetyltransferase (GNAT) family
BIBIDAFE_00516 6.37e-23 - - - K - - - Penicillinase repressor
BIBIDAFE_00517 0.0 copB 3.6.3.3, 3.6.3.4, 3.6.3.5, 3.6.3.54 - P ko:K01533,ko:K01534,ko:K17686 ko01524,ko04016,map01524,map04016 ko00000,ko00001,ko01000 P-type ATPase
BIBIDAFE_00518 7.54e-51 - - - EGP ko:K08217 - br01600,ko00000,ko01504,ko02000 Transmembrane secretion effector
BIBIDAFE_00519 2.59e-83 mdt(A) - - EGP ko:K08217 - br01600,ko00000,ko01504,ko02000 Major facilitator Superfamily
BIBIDAFE_00520 3.5e-307 amt - - P ko:K03320 - ko00000,ko02000 ammonium transporter
BIBIDAFE_00521 8.51e-103 - - - V - - - Abi-like protein
BIBIDAFE_00523 1.04e-292 - - - S - - - Uncharacterised protein family (UPF0236)
BIBIDAFE_00524 1.2e-75 pts23C - - G ko:K02761 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko02000 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
BIBIDAFE_00525 5.04e-173 - - - K ko:K03492 - ko00000,ko03000 UTRA
BIBIDAFE_00526 2.73e-152 - 3.2.1.86 GT1 G ko:K01223 ko00010,ko00500,map00010,map00500 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 1 family
BIBIDAFE_00527 5.73e-120 - - - S - - - VanZ like family
BIBIDAFE_00528 3.98e-171 yebC - - K - - - Transcriptional regulatory protein
BIBIDAFE_00529 8.35e-230 comGA - - NU ko:K02243 - ko00000,ko00002,ko02044 Type II IV secretion system protein
BIBIDAFE_00530 5.57e-224 comGB - - NU ko:K02244 - ko00000,ko00002,ko02044 type II secretion system
BIBIDAFE_00531 6.15e-66 comGC - - U ko:K02245 - ko00000,ko00002,ko02044 competence protein ComGC
BIBIDAFE_00532 2.04e-95 - - - - ko:K02246 - ko00000,ko00002,ko02044 -
BIBIDAFE_00533 1.69e-53 - - - - - - - -
BIBIDAFE_00534 2.17e-108 - - - U ko:K02248 - ko00000,ko00002,ko02044 Putative Competence protein ComGF
BIBIDAFE_00535 5.95e-239 ytxK 2.1.1.72 - L ko:K00571 - ko00000,ko01000,ko02048 N-6 DNA Methylase
BIBIDAFE_00536 1.16e-285 ackA 2.7.2.1 - F ko:K00925 ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
BIBIDAFE_00539 2.45e-33 - - - - - - - -
BIBIDAFE_00541 1.48e-45 - - - - - - - -
BIBIDAFE_00545 6.19e-42 - - - - - - - -
BIBIDAFE_00546 1.51e-21 - - - - - - - -
BIBIDAFE_00547 1.17e-14 xre - - K - - - sequence-specific DNA binding
BIBIDAFE_00548 6.6e-176 - - - L - - - Belongs to the 'phage' integrase family
BIBIDAFE_00549 1.32e-50 - - - M - - - Protein of unknown function (DUF3737)
BIBIDAFE_00550 2.87e-47 - - - M - - - Protein of unknown function (DUF3737)
BIBIDAFE_00551 2.26e-163 patB 4.4.1.8 - E ko:K14155 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 ko00000,ko00001,ko01000,ko01007 Aminotransferase, class I
BIBIDAFE_00552 3.26e-90 patB 4.4.1.8 - E ko:K14155 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 ko00000,ko00001,ko01000,ko01007 Aminotransferase, class I
BIBIDAFE_00553 5.58e-222 manA 5.3.1.8 - G ko:K01809 ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 mannose-6-phosphate isomerase
BIBIDAFE_00554 6.68e-81 - - - S - - - SdpI/YhfL protein family
BIBIDAFE_00555 9.37e-169 - - - K - - - Transcriptional regulatory protein, C terminal
BIBIDAFE_00556 0.0 yclK - - T - - - Histidine kinase
BIBIDAFE_00557 7.73e-58 oppA - - E ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter
BIBIDAFE_00558 1.84e-94 oppA - - E ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter
BIBIDAFE_00559 6.3e-83 XK27_00340 3.1.3.5 - F ko:K01081 ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110 ko00000,ko00001,ko01000 Belongs to the 5'-nucleotidase family
BIBIDAFE_00560 0.0 XK27_00340 3.1.3.5 - F ko:K01081 ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110 ko00000,ko00001,ko01000 Belongs to the 5'-nucleotidase family
BIBIDAFE_00561 1.34e-278 - - - EGP ko:K08196 - ko00000,ko02000 Major Facilitator
BIBIDAFE_00562 1.65e-285 aspC - - E ko:K00841 ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Aminotransferase
BIBIDAFE_00563 0.0 aspS 6.1.1.12 - J ko:K01876 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
BIBIDAFE_00564 1.49e-312 hisS 6.1.1.21 - J ko:K01892 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 histidyl-tRNA synthetase
BIBIDAFE_00565 4.09e-96 dtd - - J ko:K07560 - ko00000,ko01000,ko03016 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
BIBIDAFE_00566 0.0 relA 2.7.6.5 - KT ko:K00951 ko00230,map00230 ko00000,ko00001,ko01000 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
BIBIDAFE_00567 1.55e-79 - - - - - - - -
BIBIDAFE_00568 2.88e-221 prmA - - J ko:K02687 - ko00000,ko01000,ko03009 Ribosomal protein L11 methyltransferase
BIBIDAFE_00569 3.74e-115 ybaK - - S ko:K03976 - ko00000,ko01000,ko03016 Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
BIBIDAFE_00572 2.3e-46 guaB 1.1.1.205 - F ko:K00088 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko04147 Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
BIBIDAFE_00573 2.72e-193 mtnU 3.5.1.3 - S ko:K13566 ko00250,map00250 ko00000,ko00001,ko01000 Carbon-nitrogen hydrolase
BIBIDAFE_00574 3.93e-292 mtnE - - E ko:K08969 ko00270,ko01100,map00270,map01100 ko00000,ko00001,ko00002,ko01000,ko01007 Aminotransferase
BIBIDAFE_00575 1.99e-235 ykpB 1.1.1.169 - H ko:K00077 ko00770,ko01100,ko01110,map00770,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
BIBIDAFE_00576 1.4e-187 ywqE 3.1.3.48 - GM ko:K01104 - ko00000,ko01000 PHP domain protein
BIBIDAFE_00577 4.92e-155 ywqD - - D - - - Capsular exopolysaccharide family
BIBIDAFE_00578 2.13e-183 epsB - - M - - - biosynthesis protein
BIBIDAFE_00579 8.23e-247 brpA - - K - - - Cell envelope-like function transcriptional attenuator common domain protein
BIBIDAFE_00580 9.54e-285 hflX - - S ko:K03665 - ko00000,ko03009 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
BIBIDAFE_00581 1.45e-172 glpQ1 3.1.4.46 - C ko:K01126 ko00564,map00564 ko00000,ko00001,ko01000 glycerophosphoryl diester phosphodiesterase
BIBIDAFE_00582 9.32e-293 - - - G - - - Antibiotic biosynthesis monooxygenase
BIBIDAFE_00583 3.94e-144 - - - G - - - Phosphoglycerate mutase family
BIBIDAFE_00584 6.81e-250 - - - D - - - nuclear chromosome segregation
BIBIDAFE_00585 7.27e-132 - - - M - - - LysM domain protein
BIBIDAFE_00586 5.26e-19 - - - - - - - -
BIBIDAFE_00587 9.05e-08 - - - - - - - -
BIBIDAFE_00588 6.99e-39 - - - S - - - Uncharacterised protein family (UPF0236)
BIBIDAFE_00589 1.29e-145 - - - S - - - Uncharacterised protein family (UPF0236)
BIBIDAFE_00590 5.23e-137 - - - D - - - AAA domain
BIBIDAFE_00591 1.17e-38 - - - - - - - -
BIBIDAFE_00592 7.71e-29 - - - EGP - - - Major Facilitator
BIBIDAFE_00593 2.25e-131 tnpR - - L - - - Resolvase, N terminal domain
BIBIDAFE_00594 4.33e-181 - 2.1.1.72 - L ko:K00571,ko:K07316 - ko00000,ko01000,ko02048 DNA methylase
BIBIDAFE_00595 2.18e-75 - 3.1.21.5 - L ko:K01156 - ko00000,ko01000,ko02048 Type III restriction enzyme, res subunit
BIBIDAFE_00596 2.06e-82 yodB - - K - - - Transcriptional regulator, HxlR family
BIBIDAFE_00597 1.1e-258 pheS 6.1.1.20 - J ko:K01889 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
BIBIDAFE_00598 0.0 pheT 6.1.1.20 - J ko:K01890 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
BIBIDAFE_00599 2.74e-89 greA - - K ko:K03624 - ko00000,ko03021 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
BIBIDAFE_00600 9.25e-217 ldh3 1.1.1.27 - C ko:K00016 ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922 ko00000,ko00001,ko01000,ko04147 lactate/malate dehydrogenase, alpha/beta C-terminal domain
BIBIDAFE_00601 1.21e-75 - - - S - - - Phage derived protein Gp49-like (DUF891)
BIBIDAFE_00602 2.29e-49 - - - K - - - Helix-turn-helix domain
BIBIDAFE_00603 4.38e-108 - - - S - - - Short repeat of unknown function (DUF308)
BIBIDAFE_00604 7.3e-212 yvcJ - - S ko:K06958 - ko00000,ko03019 Displays ATPase and GTPase activities
BIBIDAFE_00605 1.09e-248 yvcK - - S - - - Required for morphogenesis under gluconeogenic growth conditions
BIBIDAFE_00606 8.23e-219 whiA - - K ko:K09762 - ko00000 May be required for sporulation
BIBIDAFE_00607 1.16e-128 clpP 3.4.21.92 - O ko:K01358 ko04112,ko04212,map04112,map04212 ko00000,ko00001,ko01000,ko01002 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
BIBIDAFE_00609 3.09e-22 ykoJ - - S - - - Peptidase propeptide and YPEB domain
BIBIDAFE_00610 1.91e-83 - - - G - - - Glycosyl hydrolases family 8
BIBIDAFE_00611 5.55e-30 - - - G - - - Glycosyl hydrolases family 8
BIBIDAFE_00612 1.92e-36 - - - L ko:K07497 - ko00000 COG2963 Transposase and inactivated derivatives
BIBIDAFE_00613 9.93e-266 pbpX1 - - V - - - Beta-lactamase
BIBIDAFE_00614 2.48e-135 yjhB 3.6.1.13 - F ko:K01515 ko00230,map00230 ko00000,ko00001,ko01000 NUDIX domain
BIBIDAFE_00615 0.0 - - - I - - - Protein of unknown function (DUF2974)
BIBIDAFE_00616 5.67e-24 - - - C - - - FMN_bind
BIBIDAFE_00617 1.1e-108 - - - - - - - -
BIBIDAFE_00618 3.1e-221 iunH 3.2.2.1 - F ko:K01239 ko00230,ko00760,ko01100,map00230,map00760,map01100 ko00000,ko00001,ko01000 inosine-uridine preferring nucleoside hydrolase
BIBIDAFE_00619 2.47e-222 ydhF - - S - - - Aldo keto reductase
BIBIDAFE_00620 7.87e-78 - - - L - - - COG2826 Transposase and inactivated derivatives, IS30 family
BIBIDAFE_00621 3.3e-37 - - - S - - - Glycosyltransferase like family 2
BIBIDAFE_00622 0.0 - - - Q - - - Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
BIBIDAFE_00623 5.33e-304 - - - M - - - Glycosyltransferase like family 2
BIBIDAFE_00625 6.71e-41 - - - EGP - - - Transmembrane secretion effector
BIBIDAFE_00626 1.68e-185 - - - L - - - Probable transposase
BIBIDAFE_00627 1.61e-23 - - - NU - - - Mycoplasma protein of unknown function, DUF285
BIBIDAFE_00628 1.84e-159 - - - S - - - Domain of unknown function (DUF4430)
BIBIDAFE_00629 5.25e-236 - - - U - - - FFAT motif binding
BIBIDAFE_00630 0.0 - - - S ko:K21449 - ko00000,ko02000 Domain of unknown function (DUF4430)
BIBIDAFE_00631 4.18e-221 - - - S - - - Uncharacterised protein family (UPF0236)
BIBIDAFE_00632 1.89e-79 - - - I - - - PAP2 superfamily
BIBIDAFE_00633 3.22e-147 cbh 3.5.1.24 - M ko:K01442 ko00120,ko00121,ko01100,map00120,map00121,map01100 ko00000,ko00001,ko01000 Linear amide C-N hydrolase, choloylglycine hydrolase family protein
BIBIDAFE_00635 5.75e-243 thyA 2.1.1.45 - F ko:K00560 ko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523 ko00000,ko00001,ko00002,ko01000 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
BIBIDAFE_00636 3.32e-124 folA 1.5.1.3 - H ko:K00287 ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523 ko00000,ko00001,ko00002,ko01000 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
BIBIDAFE_00637 7.3e-22 ps301 - - K - - - sequence-specific DNA binding
BIBIDAFE_00638 0.0 rnr - - J ko:K12573 ko03018,map03018 ko00000,ko00001,ko01000,ko03016,ko03019 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
BIBIDAFE_00639 4.52e-101 smpB - - J ko:K03664 - ko00000 the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
BIBIDAFE_00640 2.35e-286 tuf - - J ko:K02358,ko:K15771 ko02010,map02010 ko00000,ko00001,ko00002,ko02000,ko03012,ko03029,ko04147 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
BIBIDAFE_00641 5.86e-281 tig - - D ko:K03545 - ko00000 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
BIBIDAFE_00642 1.71e-300 clpX - - O ko:K03544 ko04112,map04112 ko00000,ko00001,ko03110 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
BIBIDAFE_00643 2.75e-137 engB - - D ko:K03978 - ko00000,ko03036 Necessary for normal cell division and for the maintenance of normal septation
BIBIDAFE_00644 2.81e-18 potE - - E - - - Amino Acid
BIBIDAFE_00645 4.56e-231 potE - - E - - - Amino Acid
BIBIDAFE_00646 1.26e-245 dapF 5.1.1.7 - E ko:K01778 ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
BIBIDAFE_00647 0.0 lysC 2.7.2.4 - E ko:K00928 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the aspartokinase family
BIBIDAFE_00649 1.3e-80 - - - S - - - Bacterial toxin of type II toxin-antitoxin system, YafQ
BIBIDAFE_00650 2.73e-60 - - - D ko:K19159 - ko00000,ko02048 Antitoxin component of a toxin-antitoxin (TA) module
BIBIDAFE_00651 9.5e-102 - - - - - - - -
BIBIDAFE_00652 4.55e-67 - - - - - - - -
BIBIDAFE_00653 1.62e-286 mdtG2 - - EGP ko:K08161 - ko00000,ko02000 Transporter, major facilitator family protein
BIBIDAFE_00654 7.36e-225 - - - - - - - -
BIBIDAFE_00655 2.79e-77 lysM - - M - - - LysM domain
BIBIDAFE_00657 0.0 pepN 3.4.11.2 - E ko:K01256 ko00480,ko01100,map00480,map01100 ko00000,ko00001,ko01000,ko01002 aminopeptidase
BIBIDAFE_00658 0.0 dtpT - - U ko:K03305 - ko00000 amino acid peptide transporter
BIBIDAFE_00659 1.58e-33 - - - - - - - -
BIBIDAFE_00660 4.44e-238 - - - S - - - Putative peptidoglycan binding domain
BIBIDAFE_00661 8.46e-50 - - - L ko:K07496 - ko00000 transposase, IS605 OrfB family
BIBIDAFE_00662 3.47e-13 - 1.8.1.7 - C ko:K00383,ko:K21739 ko00480,ko04918,map00480,map04918 ko00000,ko00001,ko01000 Pyridine nucleotide-disulfide oxidoreductase
BIBIDAFE_00663 0.0 - - - N ko:K09384 - ko00000 Uncharacterized conserved protein (DUF2075)
BIBIDAFE_00664 1.63e-41 ybgF - - E ko:K02205,ko:K03293,ko:K16235,ko:K16236 - ko00000,ko02000 amino acid
BIBIDAFE_00665 6.09e-165 ybgF - - E ko:K02205,ko:K03293,ko:K16235,ko:K16236 - ko00000,ko02000 amino acid
BIBIDAFE_00666 1.14e-37 ybgF - - E ko:K02205,ko:K03293,ko:K16235,ko:K16236 - ko00000,ko02000 amino acid
BIBIDAFE_00667 1.7e-46 mmuM 2.1.1.10 - H ko:K00547 ko00270,ko01100,ko01110,map00270,map01100,map01110 ko00000,ko00001,ko01000 homocysteine S-methyltransferase
BIBIDAFE_00668 9.94e-34 mmuM 2.1.1.10 - H ko:K00547 ko00270,ko01100,ko01110,map00270,map01100,map01110 ko00000,ko00001,ko01000 homocysteine S-methyltransferase
BIBIDAFE_00669 5.48e-62 mmuM 2.1.1.10 - H ko:K00547 ko00270,ko01100,ko01110,map00270,map01100,map01110 ko00000,ko00001,ko01000 homocysteine S-methyltransferase
BIBIDAFE_00670 2.68e-296 amd - - E - - - Peptidase family M20/M25/M40
BIBIDAFE_00671 8.21e-304 steT - - E ko:K03294 - ko00000 amino acid
BIBIDAFE_00672 4.97e-81 - - - S ko:K07006 - ko00000 Pyridoxamine 5'-phosphate oxidase
BIBIDAFE_00673 5.54e-88 - - - S - - - ASCH domain
BIBIDAFE_00674 7.59e-215 - - - L ko:K07448 - ko00000,ko02048 restriction endonuclease
BIBIDAFE_00675 4.88e-200 - - - L - - - helicase
BIBIDAFE_00676 3.97e-187 hsdM 2.1.1.72 - V ko:K03427 - ko00000,ko01000,ko02048 type I restriction-modification system
BIBIDAFE_00677 2.42e-261 - 3.1.21.3 - V ko:K01154 - ko00000,ko01000,ko02048 Type I restriction modification DNA specificity domain
BIBIDAFE_00678 3.99e-196 hsdM 2.1.1.72 - V ko:K03427 - ko00000,ko01000,ko02048 type I restriction-modification system
BIBIDAFE_00679 5.61e-57 - - - L ko:K07497 - ko00000 COG2963 Transposase and inactivated derivatives
BIBIDAFE_00680 1.08e-71 - - - L ko:K07497 - ko00000 COG2963 Transposase and inactivated derivatives
BIBIDAFE_00681 6.26e-64 - - - L ko:K07497 - ko00000 COG2963 Transposase and inactivated derivatives
BIBIDAFE_00682 0.0 ytgP - - S ko:K03328 - ko00000 Polysaccharide biosynthesis protein
BIBIDAFE_00683 0.0 leuS 6.1.1.4 - J ko:K01869 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Belongs to the class-I aminoacyl-tRNA synthetase family
BIBIDAFE_00684 5.04e-154 yodM 3.6.1.27 - I ko:K19302 ko00550,map00550 ko00000,ko00001,ko01000,ko01011 Acid phosphatase homologues
BIBIDAFE_00685 3.35e-55 hepT 2.5.1.30 - H ko:K00805 ko00900,ko01110,map00900,map01110 ko00000,ko00001,ko01000,ko01006 Belongs to the FPP GGPP synthase family
BIBIDAFE_00686 4.97e-93 - - - S - - - Iron-sulphur cluster biosynthesis
BIBIDAFE_00687 1.52e-43 - - - - - - - -
BIBIDAFE_00688 3.96e-89 - - - - - - - -
BIBIDAFE_00689 2.07e-37 pphA 3.1.3.16 - T ko:K07313 - ko00000,ko01000 Calcineurin-like phosphoesterase
BIBIDAFE_00690 1.02e-61 pphA 3.1.3.16 - T ko:K07313 - ko00000,ko01000 Calcineurin-like phosphoesterase
BIBIDAFE_00691 1.01e-27 pphA 3.1.3.16 - T ko:K07313 - ko00000,ko01000 Calcineurin-like phosphoesterase
BIBIDAFE_00692 2.49e-114 luxS 4.4.1.21 - H ko:K07173 ko00270,ko01100,ko01230,ko02024,ko02026,ko05111,map00270,map01100,map01230,map02024,map02026,map05111 ko00000,ko00001,ko00002,ko01000 Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
BIBIDAFE_00693 0.0 metE 2.1.1.14 - E ko:K00549 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
BIBIDAFE_00694 2.51e-159 metF 1.5.1.20 - C ko:K00297 ko00670,ko00720,ko01100,ko01120,ko01200,ko01523,map00670,map00720,map01100,map01120,map01200,map01523 ko00000,ko00001,ko00002,ko01000 Methylenetetrahydrofolate reductase
BIBIDAFE_00695 8.19e-140 - - - L - - - Transposase and inactivated derivatives, IS30 family
BIBIDAFE_00696 5.34e-231 - - - P ko:K06901 - ko00000,ko02000 secondary active sulfate transmembrane transporter activity
BIBIDAFE_00697 1.32e-125 - 2.4.2.7 - F ko:K00759 ko00230,ko01100,map00230,map01100 ko00000,ko00001,ko01000,ko04147 Phosphoribosyl transferase domain
BIBIDAFE_00698 4.03e-137 - - - K - - - LysR substrate binding domain
BIBIDAFE_00699 2.75e-27 - - - - - - - -
BIBIDAFE_00700 2.71e-281 - - - S - - - Sterol carrier protein domain
BIBIDAFE_00701 2.7e-126 citX 2.7.7.61 - HI ko:K05964 ko02020,map02020 ko00000,ko00001,ko01000 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase
BIBIDAFE_00702 1.33e-66 arcC 2.7.2.2 - E ko:K00926 ko00220,ko00230,ko00910,ko01100,ko01120,ko01200,map00220,map00230,map00910,map01100,map01120,map01200 ko00000,ko00001,ko01000 Belongs to the carbamate kinase family
BIBIDAFE_00703 2.68e-84 arcC 2.7.2.2 - E ko:K00926 ko00220,ko00230,ko00910,ko01100,ko01120,ko01200,map00220,map00230,map00910,map01100,map01120,map01200 ko00000,ko00001,ko01000 Belongs to the carbamate kinase family
BIBIDAFE_00704 2e-140 argF 2.1.3.3 - E ko:K00611 ko00220,ko01100,ko01110,ko01130,ko01230,map00220,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
BIBIDAFE_00705 4.02e-17 argF 2.1.3.3 - E ko:K00611 ko00220,ko01100,ko01110,ko01130,ko01230,map00220,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
BIBIDAFE_00706 8.71e-54 arcA 3.5.3.6 - E ko:K01478 ko00220,ko01100,ko01110,ko01130,map00220,map01100,map01110,map01130 ko00000,ko00001,ko01000 Arginine
BIBIDAFE_00707 8.41e-72 arcA 3.5.3.6 - E ko:K01478 ko00220,ko01100,ko01110,ko01130,map00220,map01100,map01110,map01130 ko00000,ko00001,ko01000 Arginine
BIBIDAFE_00708 1.32e-33 arcA 3.5.3.6 - E ko:K01478 ko00220,ko01100,ko01110,ko01130,map00220,map01100,map01110,map01130 ko00000,ko00001,ko01000 Arginine
BIBIDAFE_00709 8.69e-146 lysR5 - - K - - - LysR substrate binding domain
BIBIDAFE_00710 1.55e-38 lysR5 - - K - - - LysR substrate binding domain
BIBIDAFE_00711 0.0 - - - P - - - Cation transporter/ATPase, N-terminus
BIBIDAFE_00712 7.61e-111 - 3.4.21.96 - S ko:K01361 - ko00000,ko01000,ko01002,ko03110 SLAP domain
BIBIDAFE_00713 1.77e-92 cls - - I ko:K06131 ko00564,ko01100,map00564,map01100 ko00000,ko00001,ko01000 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BIBIDAFE_00714 1.34e-140 cls - - I ko:K06131 ko00564,ko01100,map00564,map01100 ko00000,ko00001,ko01000 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BIBIDAFE_00715 2.62e-196 metA 2.3.1.46 - E ko:K00651 ko00270,ko00920,ko01100,ko01110,ko01230,map00270,map00920,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Transfers an acetyl group from acetyl-CoA to
BIBIDAFE_00716 3.35e-217 cysK 2.5.1.47 - E ko:K01738 ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the cysteine synthase cystathionine beta- synthase family
BIBIDAFE_00717 2.41e-123 apt 2.4.2.7 - F ko:K00759 ko00230,ko01100,map00230,map01100 ko00000,ko00001,ko01000,ko04147 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
BIBIDAFE_00718 0.0 recJ - - L ko:K07462 ko03410,ko03430,ko03440,map03410,map03430,map03440 ko00000,ko00001,ko01000,ko03400 Single-stranded-DNA-specific exonuclease RecJ
BIBIDAFE_00719 4.27e-155 srtA 3.4.22.70 - M ko:K07284 - ko00000,ko01000,ko01002,ko01011 sortase family
BIBIDAFE_00720 2.19e-176 lepA - - M ko:K03596 ko05134,map05134 ko00000,ko00001 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
BIBIDAFE_00721 3.34e-235 lepA - - M ko:K03596 ko05134,map05134 ko00000,ko00001 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
BIBIDAFE_00722 1.29e-21 - - - - - - - -
BIBIDAFE_00723 3.33e-32 - - - L - - - An automated process has identified a potential problem with this gene model
BIBIDAFE_00724 4.46e-72 - - - S - - - Protein of unknown function (DUF3397)
BIBIDAFE_00725 1.09e-18 - - - S - - - Protein of unknown function (DUF4044)
BIBIDAFE_00726 1.39e-124 mreD - - - ko:K03571 - ko00000,ko03036 -
BIBIDAFE_00727 4.28e-191 mreC - - M ko:K03570 - ko00000,ko03036 Involved in formation and maintenance of cell shape
BIBIDAFE_00728 1.22e-227 mreB - - D ko:K03569 - ko00000,ko02048,ko03036,ko04812 cell shape determining protein MreB
BIBIDAFE_00729 3.32e-148 radC - - L ko:K03630 - ko00000 DNA repair protein
BIBIDAFE_00730 4.33e-162 - - - S - - - Haloacid dehalogenase-like hydrolase
BIBIDAFE_00731 2.64e-304 folC 6.3.2.12, 6.3.2.17 - H ko:K11754 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the folylpolyglutamate synthase family
BIBIDAFE_00732 0.0 valS 6.1.1.9 - J ko:K01873 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
BIBIDAFE_00733 3.89e-52 - - - - ko:K19167 - ko00000,ko02048 -
BIBIDAFE_00735 3.44e-152 - - - K ko:K03492 - ko00000,ko03000 UTRA domain
BIBIDAFE_00736 3.93e-73 pbg4 3.2.1.86 GT1 G ko:K01223 ko00010,ko00500,map00010,map00500 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 1 family
BIBIDAFE_00737 1.5e-228 pbg4 3.2.1.86 GT1 G ko:K01223 ko00010,ko00500,map00010,map00500 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 1 family
BIBIDAFE_00738 7.97e-25 pbg4 3.2.1.86 GT1 G ko:K01223 ko00010,ko00500,map00010,map00500 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 1 family
BIBIDAFE_00739 2.36e-63 - 3.6.4.12 - K ko:K03655 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Putative DNA-binding domain
BIBIDAFE_00740 1.74e-208 - - - S - - - Uncharacterised protein family (UPF0236)
BIBIDAFE_00741 1.43e-53 - - - L ko:K07496 - ko00000 transposase, IS605 OrfB family
BIBIDAFE_00742 3.03e-56 - - - M - - - LPXTG-motif cell wall anchor domain protein
BIBIDAFE_00743 4.91e-14 - - - M - - - LPXTG-motif cell wall anchor domain protein
BIBIDAFE_00744 1.04e-215 ldh 1.1.1.27 - C ko:K00016 ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922 ko00000,ko00001,ko01000,ko04147 Belongs to the LDH MDH superfamily. LDH family
BIBIDAFE_00745 2.26e-83 - - - M - - - Rib/alpha-like repeat
BIBIDAFE_00748 7.86e-27 - - - - - - - -
BIBIDAFE_00749 9.8e-38 - - - - - - - -
BIBIDAFE_00750 0.0 pepC4 3.4.22.40 - E ko:K01372 - ko00000,ko01000,ko01002 Peptidase C1-like family
BIBIDAFE_00751 1.23e-120 glcD 1.1.3.15 - C ko:K00104 ko00630,ko01100,ko01110,ko01120,ko01130,map00630,map01100,map01110,map01120,map01130 ko00000,ko00001,ko01000 FAD linked oxidases, C-terminal domain
BIBIDAFE_00752 3.4e-126 glcD 1.1.3.15 - C ko:K00104 ko00630,ko01100,ko01110,ko01120,ko01130,map00630,map01100,map01110,map01120,map01130 ko00000,ko00001,ko01000 FAD linked oxidases, C-terminal domain
BIBIDAFE_00753 1.97e-140 pncA - - Q - - - Isochorismatase family
BIBIDAFE_00754 0.0 nadC2 6.3.4.21 - F ko:K00763 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko01000 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
BIBIDAFE_00766 2.61e-195 - - - L - - - Phage integrase, N-terminal SAM-like domain
BIBIDAFE_00767 7.18e-86 crcB1 - - U ko:K06199 - ko00000,ko02000 Important for reducing fluoride concentration in the cell, thus reducing its toxicity
BIBIDAFE_00768 2.08e-84 crcB - - U ko:K06199 - ko00000,ko02000 Important for reducing fluoride concentration in the cell, thus reducing its toxicity
BIBIDAFE_00769 6.64e-45 rpsR - - J ko:K02963 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
BIBIDAFE_00770 2.06e-109 ssb - - L ko:K03111 ko03030,ko03430,ko03440,map03030,map03430,map03440 ko00000,ko00001,ko03029,ko03032,ko03400 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
BIBIDAFE_00771 1.93e-65 rpsF - - J ko:K02990 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011,ko03029 Binds together with S18 to 16S ribosomal RNA
BIBIDAFE_00772 3.42e-197 ykuT - - M ko:K16052,ko:K22044 - ko00000,ko02000 mechanosensitive ion channel
BIBIDAFE_00773 3.11e-28 ytxG - - S - - - protein containing a divergent version of the methyl-accepting chemotaxis-like domain
BIBIDAFE_00774 7.75e-61 - - - - - - - -
BIBIDAFE_00776 1.12e-181 galU 2.7.7.9 - M ko:K00963 ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130 ko00000,ko00001,ko00002,ko01000 UTP-glucose-1-phosphate uridylyltransferase
BIBIDAFE_00777 4.25e-88 - - - - - - - -
BIBIDAFE_00778 7.56e-28 - - - S - - - protein encoded in hypervariable junctions of pilus gene clusters
BIBIDAFE_00779 2.39e-101 rfbD 1.1.1.133 - M ko:K00067 ko00521,ko00523,ko01130,map00521,map00523,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
BIBIDAFE_00780 0.0 uvrA - - L ko:K03701 ko03420,map03420 ko00000,ko00001,ko03400 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
BIBIDAFE_00781 0.0 uvrB - - L ko:K03702 ko03420,map03420 ko00000,ko00001,ko03400 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
BIBIDAFE_00782 0.0 pgm 5.4.2.2 - G ko:K01835 ko00010,ko00030,ko00052,ko00230,ko00500,ko00520,ko00521,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00052,map00230,map00500,map00520,map00521,map01100,map01110,map01120,map01130 ko00000,ko00001,ko00002,ko01000 Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
BIBIDAFE_00783 7.7e-80 glgC 2.7.7.27 - H ko:K00975 ko00500,ko00520,ko01100,ko01110,ko02026,map00500,map00520,map01100,map01110,map02026 ko00000,ko00001,ko00002,ko01000 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
BIBIDAFE_00784 3.46e-241 gpsA 1.1.1.94 - I ko:K00057 ko00564,ko01110,map00564,map01110 ko00000,ko00001,ko01000 Glycerol-3-phosphate dehydrogenase
BIBIDAFE_00785 0.0 hsdR 3.1.21.3 - L ko:K01153 - ko00000,ko01000,ko02048 DEAD/DEAH box helicase
BIBIDAFE_00786 0.0 nrdE 1.17.4.1 - F ko:K00525 ko00230,ko00240,ko01100,map00230,map00240,map01100 ko00000,ko00001,ko00002,ko01000,ko03400 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
BIBIDAFE_00787 1.63e-95 nrdI - - F ko:K03647 - ko00000 Probably involved in ribonucleotide reductase function
BIBIDAFE_00788 2.56e-250 nrdF 1.17.4.1 - F ko:K00526 ko00230,ko00240,ko01100,map00230,map00240,map01100 ko00000,ko00001,ko00002,ko01000,ko03400 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
BIBIDAFE_00789 7.51e-23 dar 1.1.1.304, 1.1.1.76 - IQ ko:K03366 ko00650,map00650 ko00000,ko00001,ko01000 reductase
BIBIDAFE_00790 2.1e-122 cysE 2.3.1.30 - E ko:K00640 ko00270,ko00920,ko01100,ko01110,ko01120,ko01200,ko01230,ko05111,map00270,map00920,map01100,map01110,map01120,map01200,map01230,map05111 ko00000,ko00001,ko00002,ko01000 Bacterial transferase hexapeptide (six repeats)
BIBIDAFE_00791 7.19e-280 mccB 4.4.1.1, 4.4.1.2, 4.4.1.8 - E ko:K01760,ko:K17217 ko00260,ko00270,ko00450,ko00920,ko01100,ko01110,ko01130,ko01230,map00260,map00270,map00450,map00920,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 cystathionine
BIBIDAFE_00792 3.63e-218 mccA 2.5.1.134, 2.5.1.47 - E ko:K01738,ko:K17216 ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the cysteine synthase cystathionine beta- synthase family
BIBIDAFE_00793 3.88e-31 - - - - - - - -
BIBIDAFE_00794 3.73e-47 - - - S - - - Uncharacterised protein family (UPF0236)
BIBIDAFE_00797 0.0 rpoC 2.7.7.6 - K ko:K03046 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
BIBIDAFE_00798 0.0 rpoB 2.7.7.6 - K ko:K03043 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
BIBIDAFE_00799 0.0 clpC - - O ko:K03696 ko01100,map01100 ko00000,ko03110 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
BIBIDAFE_00800 7.84e-106 ytsP 1.8.4.14 - T ko:K08968 ko00270,map00270 ko00000,ko00001,ko01000 GAF domain-containing protein
BIBIDAFE_00803 4.36e-104 - - - - - - - -
BIBIDAFE_00805 0.0 lysS 6.1.1.6 - J ko:K04567 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the class-II aminoacyl-tRNA synthetase family
BIBIDAFE_00806 1.67e-249 dus - - J ko:K05540 - ko00000,ko01000,ko03016 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
BIBIDAFE_00807 1.53e-211 hslO - - O ko:K04083 - ko00000,ko03110 Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
BIBIDAFE_00808 0.0 ftsH - - O ko:K03798 - ko00000,ko00002,ko01000,ko01002,ko03110 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
BIBIDAFE_00809 1.26e-308 tilS 2.4.2.8, 6.3.4.19 - J ko:K04075,ko:K15780 ko00230,ko01100,ko01110,map00230,map01100,map01110 ko00000,ko00001,ko01000,ko03016 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
BIBIDAFE_00810 4.62e-81 - - - J ko:K07571 - ko00000 S1 RNA binding domain
BIBIDAFE_00811 6.18e-77 divIC - - D ko:K13052 - ko00000,ko03036 Septum formation initiator
BIBIDAFE_00812 1.26e-46 yabO - - J - - - S4 domain protein
BIBIDAFE_00813 0.0 mfd - - L ko:K03723 ko03420,map03420 ko00000,ko00001,ko01000,ko03400 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
BIBIDAFE_00814 6.58e-135 pth 3.1.1.29 - J ko:K01056 - ko00000,ko01000,ko03012 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
BIBIDAFE_00815 1.7e-233 ldh 1.1.1.27 - C ko:K00016 ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922 ko00000,ko00001,ko01000,ko04147 Belongs to the LDH MDH superfamily. LDH family
BIBIDAFE_00816 1.01e-165 - - - S - - - (CBS) domain
BIBIDAFE_00817 1.38e-120 - - - K - - - transcriptional regulator
BIBIDAFE_00818 2.79e-277 alr 5.1.1.1, 5.1.1.5 - E ko:K01775,ko:K20707 ko00473,ko01100,ko01502,map00473,map01100,map01502 ko00000,ko00001,ko01000,ko01011 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
BIBIDAFE_00819 6.61e-80 acpS 2.7.8.7 - I ko:K00997 ko00770,map00770 ko00000,ko00001,ko01000 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
BIBIDAFE_00820 0.0 cshA 3.6.4.13 - F ko:K05592 ko03018,map03018 ko00000,ko00001,ko01000,ko03009,ko03019 DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
BIBIDAFE_00821 0.0 murF 6.3.2.10 - M ko:K01929 ko00300,ko00550,ko01100,ko01502,map00300,map00550,map01100,map01502 ko00000,ko00001,ko01000,ko01011 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
BIBIDAFE_00822 5.28e-53 rpmE - - J ko:K02909 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal protein L31
BIBIDAFE_00823 3.58e-200 yhaX - - S - - - Sucrose-6F-phosphate phosphohydrolase
BIBIDAFE_00824 2.68e-120 - - - L - - - An automated process has identified a potential problem with this gene model
BIBIDAFE_00825 5.65e-28 - - - M - - - Glycosyltransferase like family 2
BIBIDAFE_00826 1.68e-19 - - - S - - - EpsG family
BIBIDAFE_00827 1.4e-17 - 3.6.4.12 - K ko:K03655 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Putative DNA-binding domain
BIBIDAFE_00828 8.54e-200 - 3.6.4.12 - K ko:K03655 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Putative DNA-binding domain
BIBIDAFE_00829 2.18e-215 pfkB 2.7.1.56 - H ko:K00882 ko00051,map00051 ko00000,ko00001,ko01000 Belongs to the carbohydrate kinase PfkB family. LacC subfamily
BIBIDAFE_00830 6.96e-180 fruR - - K ko:K03436 - ko00000,ko03000 DeoR C terminal sensor domain
BIBIDAFE_00833 5.7e-36 - - - - - - - -
BIBIDAFE_00834 8.68e-44 - - - - - - - -
BIBIDAFE_00835 6.23e-47 - - - K ko:K07727 - ko00000,ko03000 Transcriptional regulator
BIBIDAFE_00836 3.06e-245 - - - L - - - COG2826 Transposase and inactivated derivatives, IS30 family
BIBIDAFE_00837 0.0 pepC 3.4.22.40 - E ko:K01372 - ko00000,ko01000,ko01002 Peptidase C1-like family
BIBIDAFE_00839 4.13e-166 - - - K ko:K03710 - ko00000,ko03000 UTRA
BIBIDAFE_00840 8.53e-292 nagA 3.5.1.25 - G ko:K01443 ko00520,ko01130,map00520,map01130 ko00000,ko00001,ko01000 Belongs to the metallo-dependent hydrolases superfamily. NagA family
BIBIDAFE_00841 3.1e-41 cspA - - K ko:K03704 - ko00000,ko03000 Cold shock protein
BIBIDAFE_00844 3.49e-123 - - - K - - - Acetyltransferase (GNAT) domain
BIBIDAFE_00845 0.0 gshR3 1.8.1.7 - C ko:K00383 ko00480,ko04918,map00480,map04918 ko00000,ko00001,ko01000 Glutathione reductase
BIBIDAFE_00846 6.58e-101 mraZ - - K ko:K03925 - ko00000 Belongs to the MraZ family
BIBIDAFE_00847 1.15e-234 rsmH 2.1.1.199 - J ko:K03438 - ko00000,ko01000,ko03009 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
BIBIDAFE_00848 1.88e-71 ftsL - - D - - - Cell division protein FtsL
BIBIDAFE_00849 0.0 pbpX - - M ko:K08724,ko:K12552,ko:K12556 ko00550,ko01100,ko01501,map00550,map01100,map01501 ko00000,ko00001,ko01000,ko01011 Penicillin-binding Protein
BIBIDAFE_00850 1.67e-57 pbpX - - M ko:K08724,ko:K12552,ko:K12556 ko00550,ko01100,ko01501,map00550,map01100,map01501 ko00000,ko00001,ko01000,ko01011 Penicillin-binding Protein
BIBIDAFE_00851 3.96e-227 mraY 2.7.8.13 - M ko:K01000 ko00550,ko01100,ko01502,map00550,map01100,map01502 ko00000,ko00001,ko01000,ko01011 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
BIBIDAFE_00852 0.0 murD 6.3.2.9 - M ko:K01925 ko00471,ko00550,ko01100,map00471,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
BIBIDAFE_00853 6e-268 murG 2.4.1.227 GT28 M ko:K02563 ko00550,ko01100,ko01502,ko04112,map00550,map01100,map01502,map04112 ko00000,ko00001,ko01000,ko01011 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
BIBIDAFE_00854 1.28e-193 divIB - - D ko:K03589 ko04112,map04112 ko00000,ko00001,ko03036 Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
BIBIDAFE_00855 2.81e-300 ftsA - - D ko:K03590 ko04112,map04112 ko00000,ko00001,ko03036,ko04812 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
BIBIDAFE_00856 2.6e-282 ftsZ - - D ko:K03531 ko04112,map04112 ko00000,ko00001,ko02048,ko03036,ko04812 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
BIBIDAFE_00857 2.88e-96 sepF - - D ko:K09772 - ko00000,ko03036 Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
BIBIDAFE_00858 2.94e-61 yggT - - S ko:K02221 - ko00000,ko02044 YGGT family
BIBIDAFE_00859 1.4e-192 ylmH - - S - - - S4 domain protein
BIBIDAFE_00860 7.13e-165 divIVA - - D ko:K04074 - ko00000,ko03036 DivIVA domain protein
BIBIDAFE_00861 0.0 ileS 6.1.1.5 - J ko:K01870 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
BIBIDAFE_00862 1.15e-43 cspA - - K ko:K03704 - ko00000,ko03000 'Cold-shock' DNA-binding domain
BIBIDAFE_00863 1.27e-134 nudF 3.6.1.13 - L ko:K01515 ko00230,map00230 ko00000,ko00001,ko01000 ADP-ribose pyrophosphatase
BIBIDAFE_00864 3.14e-57 - - - - - - - -
BIBIDAFE_00865 1.19e-162 mtnN 3.2.2.9 - E ko:K01243 ko00270,ko01100,ko01230,map00270,map01100,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
BIBIDAFE_00866 5.65e-277 iscS 2.8.1.7 - E ko:K04487 ko00730,ko01100,ko04122,map00730,map01100,map04122 ko00000,ko00001,ko01000,ko02048,ko03016,ko03029 Aminotransferase class V
BIBIDAFE_00867 2.01e-74 XK27_04120 - - S - - - Putative amino acid metabolism
BIBIDAFE_00868 1.14e-280 mnmA 2.8.1.13 - J ko:K00566 ko04122,map04122 ko00000,ko00001,ko01000,ko03016 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
BIBIDAFE_00869 5.5e-162 pgm - - G - - - Phosphoglycerate mutase family
BIBIDAFE_00870 9.04e-145 - - - S - - - repeat protein
BIBIDAFE_00871 0.0 recD2 3.1.11.5 - L ko:K03581 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
BIBIDAFE_00872 1.6e-135 ytlR - - I - - - Diacylglycerol kinase catalytic domain
BIBIDAFE_00873 1.83e-37 ytlR - - I - - - Diacylglycerol kinase catalytic domain
BIBIDAFE_00874 0.0 rnjA - - J ko:K12574 ko03018,map03018 ko00000,ko00001,ko01000,ko03019 An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
BIBIDAFE_00875 9e-46 ykzG - - S - - - Belongs to the UPF0356 family
BIBIDAFE_00876 1.96e-131 def 3.5.1.88 - J ko:K01462 - ko00000,ko01000 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
BIBIDAFE_00877 0.0 typA - - T ko:K06207 - ko00000 GTP-binding protein TypA
BIBIDAFE_00878 4.04e-265 ftsW - - D ko:K03588 ko04112,map04112 ko00000,ko00001,ko02000,ko03036 Belongs to the SEDS family
BIBIDAFE_00879 1.72e-71 ylbG - - S - - - Uncharacterized protein conserved in bacteria (DUF2129)
BIBIDAFE_00880 6.08e-125 rsmD 2.1.1.171 - L ko:K08316 - ko00000,ko01000,ko03009 RNA methyltransferase, RsmD family
BIBIDAFE_00881 6.77e-111 coaD 2.7.7.3 - H ko:K00954 ko00770,ko01100,map00770,map01100 ko00000,ko00001,ko00002,ko01000 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
BIBIDAFE_00882 6.48e-244 lon - - T ko:K07177 ko02024,map02024 ko00000,ko00001,ko01002 Belongs to the peptidase S16 family
BIBIDAFE_00883 3.56e-128 comEA - - L ko:K02237 - ko00000,ko00002,ko02044 Competence protein ComEA
BIBIDAFE_00884 0.0 comEC - - S ko:K02238 - ko00000,ko00002,ko02044 Competence protein ComEC
BIBIDAFE_00885 2.46e-224 holA 2.7.7.7 - L ko:K02340 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase III delta subunit
BIBIDAFE_00886 1.54e-47 rpsT - - J ko:K02968 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds directly to 16S ribosomal RNA
BIBIDAFE_00887 1.48e-57 rpsO - - J ko:K02956 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
BIBIDAFE_00888 0.0 rnjB - - J ko:K12574 ko03018,map03018 ko00000,ko00001,ko01000,ko03019 An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
BIBIDAFE_00889 3.42e-194 - - - - - - - -
BIBIDAFE_00890 8.26e-30 qacA - - EGP - - - Major Facilitator
BIBIDAFE_00891 9.07e-36 qacA - - EGP - - - Major Facilitator
BIBIDAFE_00896 1.31e-295 tcaA - - S ko:K21463 - ko00000 response to antibiotic
BIBIDAFE_00897 8.75e-138 - - - S - - - Protein of unknown function (DUF1275)
BIBIDAFE_00898 2.02e-51 - - - S - - - Transglycosylase associated protein
BIBIDAFE_00899 0.0 nagZ 3.2.1.52 - G ko:K01207 ko00520,ko00531,ko01100,ko01501,map00520,map00531,map01100,map01501 ko00000,ko00001,ko00002,ko01000 Glycosyl hydrolase family 3 N terminal domain
BIBIDAFE_00900 1.28e-163 - - - F - - - NUDIX domain
BIBIDAFE_00901 9.71e-242 oppA - - E ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter, substratebinding protein
BIBIDAFE_00902 1.76e-109 - - - S - - - COG NOG38524 non supervised orthologous group
BIBIDAFE_00904 1.3e-158 yfbR - - S ko:K07023 - ko00000 HD containing hydrolase-like enzyme
BIBIDAFE_00905 8.5e-207 - - - L - - - HNH nucleases
BIBIDAFE_00906 2.21e-177 glnQ - - E ko:K17076 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ABC transporter, ATP-binding protein
BIBIDAFE_00907 0.0 XK27_05795 - - P ko:K17073,ko:K17074 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter permease
BIBIDAFE_00908 1.53e-159 yxlJ 3.2.2.21 - L ko:K03652 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 Belongs to the DNA glycosylase MPG family
BIBIDAFE_00909 1.67e-83 yeaO - - S - - - Protein of unknown function, DUF488
BIBIDAFE_00910 3.66e-161 terC - - P - - - Integral membrane protein TerC family
BIBIDAFE_00911 3.19e-122 adaB 2.1.1.63 - L ko:K00567,ko:K10778,ko:K13531 - ko00000,ko01000,ko03000,ko03400 6-O-methylguanine DNA methyltransferase, DNA binding domain
BIBIDAFE_00912 1.19e-168 cobB - - K ko:K12410 - ko00000,ko01000 SIR2 family
BIBIDAFE_00913 4.64e-111 - - - - - - - -
BIBIDAFE_00914 0.0 cls - - I ko:K06131 ko00564,ko01100,map00564,map01100 ko00000,ko00001,ko01000 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BIBIDAFE_00915 1.33e-227 - - - S - - - Alpha/beta hydrolase of unknown function (DUF915)
BIBIDAFE_00916 2.07e-187 rnhA 3.1.26.4 - L ko:K03469 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
BIBIDAFE_00917 1.72e-185 - - - S - - - Protein of unknown function (DUF1002)
BIBIDAFE_00918 3.74e-204 epsV - - S - - - glycosyl transferase family 2
BIBIDAFE_00919 2.62e-164 - - - S - - - Alpha/beta hydrolase family
BIBIDAFE_00920 2.07e-147 - - - GM - - - NmrA-like family
BIBIDAFE_00921 6.35e-73 - - - - - - - -
BIBIDAFE_00922 4.33e-234 prs2 2.7.6.1 - F ko:K00948 ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
BIBIDAFE_00923 2.69e-157 - - - K - - - Bacterial regulatory proteins, tetR family
BIBIDAFE_00924 6.89e-172 - - - - - - - -
BIBIDAFE_00925 0.0 glnPH2 - - P ko:K02029,ko:K02030 - ko00000,ko00002,ko02000 ABC transporter permease
BIBIDAFE_00926 5.22e-173 glnQ 3.6.3.21 - E ko:K02028 - ko00000,ko00002,ko01000,ko02000 ABC transporter, ATP-binding protein
BIBIDAFE_00927 5.91e-212 - - - S - - - Cysteine-rich secretory protein family
BIBIDAFE_00928 4.73e-46 - - - S - - - Cysteine-rich secretory protein family
BIBIDAFE_00929 3.08e-266 ddl 6.3.2.4 - F ko:K01921 ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502 ko00000,ko00001,ko01000,ko01011 Belongs to the D-alanine--D-alanine ligase family
BIBIDAFE_00930 4.59e-147 - - - - - - - -
BIBIDAFE_00931 8.39e-259 yibE - - S - - - overlaps another CDS with the same product name
BIBIDAFE_00932 1.35e-167 yibF - - S - - - overlaps another CDS with the same product name
BIBIDAFE_00933 1.07e-204 - - - I - - - alpha/beta hydrolase fold
BIBIDAFE_00934 1.07e-39 - - - - - - - -
BIBIDAFE_00935 0.0 - - - G - - - Belongs to the glycosyl hydrolase 31 family
BIBIDAFE_00936 8.67e-111 ntd 2.4.2.6 - F ko:K08728 ko00240,map00240 ko00000,ko00001,ko01000 Nucleoside
BIBIDAFE_00937 8.23e-117 - 2.7.1.200, 2.7.1.204 - G ko:K02773,ko:K20112 ko00052,ko01100,ko02060,map00052,map01100,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
BIBIDAFE_00938 9.67e-144 - 3.1.3.48 - T ko:K01104 - ko00000,ko01000 Tyrosine phosphatase family
BIBIDAFE_00939 2.18e-216 repA - - S - - - Replication initiator protein A
BIBIDAFE_00940 3.82e-83 - - - L - - - Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
BIBIDAFE_00941 5.85e-71 - 2.1.1.72 - L ko:K07316 - ko00000,ko01000,ko02048 DNA methylase
BIBIDAFE_00942 0.0 sthIR 3.1.21.5 - L ko:K01156 - ko00000,ko01000,ko02048 Type III restriction enzyme, res subunit
BIBIDAFE_00943 2.42e-57 - - - S - - - MTH538 TIR-like domain (DUF1863)
BIBIDAFE_00944 2.27e-289 - - - L - - - MULE transposase domain
BIBIDAFE_00946 4.48e-46 aroK 2.7.1.71 - F ko:K00891 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
BIBIDAFE_00947 1.2e-95 tyrA 1.3.1.12 - E ko:K04517 ko00400,ko00401,ko01100,ko01110,ko01130,ko01230,map00400,map00401,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 prephenate dehydrogenase
BIBIDAFE_00948 3.34e-192 aroA 2.5.1.19 - E ko:K00800 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
BIBIDAFE_00949 4.36e-202 aroC 4.2.3.5 - E ko:K01736 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
BIBIDAFE_00950 1.33e-17 - - - G - - - Major Facilitator
BIBIDAFE_00951 7.41e-148 - - - G - - - Major Facilitator Superfamily
BIBIDAFE_00952 7.71e-133 dut 3.6.1.23 - F ko:K01520 ko00240,ko00983,ko01100,map00240,map00983,map01100 ko00000,ko00001,ko00002,ko01000,ko03400 dUTP diphosphatase
BIBIDAFE_00953 0.0 radA - - O ko:K04485 - ko00000,ko03400 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
BIBIDAFE_00954 0.0 gltX 6.1.1.24 - J ko:K09698 ko00970,ko01100,map00970,map01100 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
BIBIDAFE_00955 0.0 cysS 6.1.1.16 - J ko:K01883 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the class-I aminoacyl-tRNA synthetase family
BIBIDAFE_00956 2.1e-99 mrnC - - J ko:K11145 - ko00000,ko01000,ko03009 Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
BIBIDAFE_00957 1.76e-178 trmH 2.1.1.185 - J ko:K03218 - ko00000,ko01000,ko03009 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
BIBIDAFE_00958 7.09e-119 comX - - K ko:K03088,ko:K03091,ko:K12296 ko02020,ko02024,map02020,map02024 ko00000,ko00001,ko03000,ko03021 Belongs to the sigma-70 factor family
BIBIDAFE_00959 2.41e-45 - - - - - - - -
BIBIDAFE_00960 0.0 gntK 2.7.1.12 - G ko:K00851 ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko01000 Belongs to the FGGY kinase family
BIBIDAFE_00961 4e-109 dxs 2.2.1.7 - H ko:K01662 ko00730,ko00900,ko01100,ko01110,ko01130,map00730,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
BIBIDAFE_00962 1.44e-138 dxs 2.2.1.7 - H ko:K01662 ko00730,ko00900,ko01100,ko01110,ko01130,map00730,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
BIBIDAFE_00963 3.01e-122 dxs 2.2.1.7 - H ko:K01662 ko00730,ko00900,ko01100,ko01110,ko01130,map00730,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
BIBIDAFE_00964 8.53e-34 secE - - U ko:K03073 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
BIBIDAFE_00965 4.28e-131 nusG - - K ko:K02601 - ko00000,ko03009,ko03021 Participates in transcription elongation, termination and antitermination
BIBIDAFE_00966 7.71e-90 rplK - - J ko:K02867 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
BIBIDAFE_00967 3.02e-160 rplA - - J ko:K02863 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
BIBIDAFE_00968 2.06e-93 yngC - - S - - - SNARE associated Golgi protein
BIBIDAFE_00969 0.0 yhdG - - E ko:K03294 - ko00000 Amino Acid
BIBIDAFE_00970 4.95e-57 gyaR 1.1.1.215, 1.1.1.26, 1.1.1.79, 1.1.1.81 - CH ko:K00015,ko:K00090 ko00030,ko00260,ko00620,ko00630,ko01100,ko01110,ko01120,map00030,map00260,map00620,map00630,map01100,map01110,map01120 ko00000,ko00001,ko01000 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BIBIDAFE_00971 6.24e-98 gyaR 1.1.1.26, 1.1.1.399, 1.1.1.95 - CH ko:K00015,ko:K00058 ko00260,ko00630,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00260,map00630,map00680,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BIBIDAFE_00972 9.09e-20 gyaR 1.1.1.215, 1.1.1.26, 1.1.1.79, 1.1.1.81 - CH ko:K00015,ko:K00090 ko00030,ko00260,ko00620,ko00630,ko01100,ko01110,ko01120,map00030,map00260,map00620,map00630,map01100,map01110,map01120 ko00000,ko00001,ko01000 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BIBIDAFE_00973 2.37e-57 yxeH - - S - - - hydrolase
BIBIDAFE_00974 2.13e-108 yxeH - - S - - - hydrolase
BIBIDAFE_00975 7.53e-203 - - - S - - - reductase
BIBIDAFE_00976 9.09e-280 coaBC 4.1.1.36, 6.3.2.5 - H ko:K01598,ko:K13038 ko00770,ko01100,map00770,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
BIBIDAFE_00977 2.14e-220 - - - S ko:K07133 - ko00000 cog cog1373
BIBIDAFE_00978 2e-277 pbuG - - S ko:K06901 - ko00000,ko02000 permease
BIBIDAFE_00979 7.76e-190 - - - S - - - haloacid dehalogenase-like hydrolase
BIBIDAFE_00980 9.81e-165 dgk2 2.7.1.76 - F ko:K10353 ko00230,ko01100,map00230,map01100 ko00000,ko00001,ko01000 deoxynucleoside kinase
BIBIDAFE_00981 1.34e-151 dak 2.7.1.76 - F ko:K10353 ko00230,ko01100,map00230,map01100 ko00000,ko00001,ko01000 deoxynucleoside kinase
BIBIDAFE_00983 3.65e-26 - - - K - - - rpiR family
BIBIDAFE_00984 1.63e-67 - - - S ko:K19157 - ko00000,ko01000,ko02048 Bacterial toxin of type II toxin-antitoxin system, YafQ
BIBIDAFE_00985 8.83e-57 - - - S ko:K07473 - ko00000,ko02048 RelB antitoxin
BIBIDAFE_00986 1.98e-133 - - - L - - - Integrase
BIBIDAFE_00987 1.03e-61 - - - - - - - -
BIBIDAFE_00988 1.46e-110 - - - FG - - - adenosine 5'-monophosphoramidase activity
BIBIDAFE_00989 2.04e-171 - - - L - - - Psort location Cytoplasmic, score
BIBIDAFE_00990 6.03e-53 - - - L - - - Psort location Cytoplasmic, score
BIBIDAFE_00991 0.0 rumA_2 2.1.1.190 - J ko:K03215 - ko00000,ko01000,ko03009 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
BIBIDAFE_00992 4.67e-313 nhaC - - C ko:K03315 - ko00000,ko02000 Na H antiporter NhaC
BIBIDAFE_00993 9.6e-73 - - - - - - - -
BIBIDAFE_00994 7.31e-154 ybhL - - S ko:K06890 - ko00000 Belongs to the BI1 family
BIBIDAFE_00995 1.12e-146 ybbB - - S - - - Protein of unknown function (DUF1211)
BIBIDAFE_00996 3.23e-218 dagK 2.7.1.107 - G ko:K07029 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 ko00000,ko00001,ko01000 Lipid kinase
BIBIDAFE_00997 0.0 gatB 6.3.5.6, 6.3.5.7 - J ko:K02434 ko00970,ko01100,map00970,map01100 ko00000,ko00001,ko01000,ko03029 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
BIBIDAFE_00998 0.0 gatA 6.3.5.6, 6.3.5.7 - J ko:K02433 ko00970,ko01100,map00970,map01100 ko00000,ko00001,ko01000,ko03029 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
BIBIDAFE_00999 2.94e-66 gatC 6.3.5.6, 6.3.5.7 - J ko:K02435 ko00970,ko01100,map00970,map01100 ko00000,ko00001,ko01000,ko03029 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
BIBIDAFE_01000 7.94e-271 camS - - S - - - sex pheromone
BIBIDAFE_01001 0.0 ligA 6.5.1.2 - L ko:K01972 ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430 ko00000,ko00001,ko01000,ko03032,ko03400 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
BIBIDAFE_01002 0.0 pcrA 3.6.4.12 - L ko:K03657 ko03420,ko03430,map03420,map03430 ko00000,ko00001,ko01000,ko03400 ATP-dependent DNA helicase
BIBIDAFE_01003 6.87e-145 acmA 3.2.1.17, 3.2.1.96 - NU ko:K01185,ko:K01227 ko00511,map00511 ko00000,ko00001,ko01000 mannosyl-glycoprotein
BIBIDAFE_01005 8.06e-115 ydcK - - S ko:K03095 - ko00000 Belongs to the SprT family
BIBIDAFE_01006 4.18e-177 - - - M - - - Glycosyltransferase sugar-binding region containing DXD motif
BIBIDAFE_01007 0.0 epsU - - S ko:K03328 - ko00000 Polysaccharide biosynthesis protein
BIBIDAFE_01008 2.57e-287 - - - M - - - CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
BIBIDAFE_01009 1.74e-206 pacL 3.6.3.8 - P ko:K01537 - ko00000,ko01000 P-type ATPase
BIBIDAFE_01010 1.22e-81 pacL 3.6.3.8 - P ko:K01537 - ko00000,ko01000 P-type ATPase
BIBIDAFE_01011 1.9e-38 pacL 3.6.3.8 - P ko:K01537 - ko00000,ko01000 P-type ATPase
BIBIDAFE_01012 2.84e-24 pacL 3.6.3.8 - P ko:K01537 - ko00000,ko01000 P-type ATPase
BIBIDAFE_01013 1.74e-68 pacL 3.6.3.8 - P ko:K01537 - ko00000,ko01000 P-type ATPase
BIBIDAFE_01014 6.23e-244 galE 5.1.3.2 - M ko:K01784 ko00052,ko00520,ko01100,map00052,map00520,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the NAD(P)-dependent epimerase dehydratase family
BIBIDAFE_01015 2.25e-240 lacM 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 beta-galactosidase
BIBIDAFE_01016 0.0 lacL 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 2 family
BIBIDAFE_01017 2.64e-243 lacR - - K ko:K02529 - ko00000,ko03000 Transcriptional regulator
BIBIDAFE_01018 8.86e-29 lacS - - G ko:K11104,ko:K16209 - ko00000,ko02000 Transporter
BIBIDAFE_01019 1.33e-58 lacS - - G ko:K11104,ko:K16209 - ko00000,ko02000 Transporter
BIBIDAFE_01020 3.8e-84 lacS - - G ko:K11104,ko:K16209 - ko00000,ko02000 Transporter
BIBIDAFE_01021 2.4e-76 lacS - - G ko:K11104,ko:K16209 - ko00000,ko02000 Transporter
BIBIDAFE_01022 0.0 lacS - - G ko:K11104,ko:K16209 - ko00000,ko02000 Transporter
BIBIDAFE_01023 3.91e-272 lacZ 3.2.1.23 - G ko:K12308 ko00052,map00052 ko00000,ko00001,ko01000 -beta-galactosidase
BIBIDAFE_01024 1.62e-114 - - - L ko:K07497 - ko00000 COG2963 Transposase and inactivated derivatives
BIBIDAFE_01025 1.48e-10 - - - K - - - LysR substrate binding domain
BIBIDAFE_01026 1.14e-79 - - - K - - - LysR substrate binding domain
BIBIDAFE_01027 0.0 clpE - - O ko:K03697 - ko00000,ko03110 Belongs to the ClpA ClpB family
BIBIDAFE_01028 4.17e-60 XK27_09445 - - S - - - Domain of unknown function (DUF1827)
BIBIDAFE_01029 0.0 prfC - - J ko:K02837 - ko00000,ko03012 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
BIBIDAFE_01030 1.78e-207 hlyX - - S ko:K03699 - ko00000,ko02042 Transporter associated domain
BIBIDAFE_01031 2.6e-96 - - - - - - - -
BIBIDAFE_01032 1.05e-112 - - - - - - - -
BIBIDAFE_01033 3.82e-188 recX - - S ko:K03565 - ko00000,ko03400 Regulatory protein RecX
BIBIDAFE_01034 0.0 rumA_1 2.1.1.190, 2.1.1.35 - J ko:K00557,ko:K03215 - ko00000,ko01000,ko03009,ko03016 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
BIBIDAFE_01035 6.79e-146 - - - L - - - COG3385 FOG Transposase and inactivated derivatives
BIBIDAFE_01036 1.41e-108 - - - L - - - COG3385 FOG Transposase and inactivated derivatives
BIBIDAFE_01037 2.79e-54 - - - L - - - COG3385 FOG Transposase and inactivated derivatives
BIBIDAFE_01039 6.66e-129 yhdJ 2.1.1.72 - L ko:K00571,ko:K07319 - ko00000,ko01000,ko02048 Belongs to the N(4) N(6)-methyltransferase family
BIBIDAFE_01040 5.57e-125 - - - - - - - -
BIBIDAFE_01045 0.0 pepO - - O ko:K07386 - ko00000,ko01000,ko01002 Peptidase family M13
BIBIDAFE_01046 3.79e-292 yttB - - EGP - - - Major Facilitator
BIBIDAFE_01047 7.38e-295 XK27_04775 - - S ko:K09155 - ko00000 PAS domain
BIBIDAFE_01048 1.12e-128 yitW - - S - - - Iron-sulfur cluster assembly protein
BIBIDAFE_01049 1.35e-180 nrdG 1.97.1.4 - O ko:K04068 - ko00000,ko01000 Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
BIBIDAFE_01050 0.0 nrdD 1.1.98.6 - F ko:K21636 ko00230,ko00240,ko01100,map00230,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Ribonucleoside-triphosphate reductase
BIBIDAFE_01053 0.0 yxbA 6.3.1.12 - S ko:K17810 - ko00000,ko01000 ATP-grasp enzyme
BIBIDAFE_01054 0.0 asnB 6.3.5.4 - E ko:K01953 ko00250,ko01100,ko01110,map00250,map01100,map01110 ko00000,ko00001,ko01000,ko01002 Asparagine synthase
BIBIDAFE_01055 0.0 - - - S - - - Calcineurin-like phosphoesterase
BIBIDAFE_01056 1.05e-108 - - - - - - - -
BIBIDAFE_01057 4.61e-142 tag 3.2.2.20 - L ko:K01246 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 glycosylase
BIBIDAFE_01058 7.76e-192 - - - P ko:K02042 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
BIBIDAFE_01059 4.7e-170 phnB - - P ko:K02042 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
BIBIDAFE_01060 6.34e-180 phnC 3.6.3.28 - P ko:K02041 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
BIBIDAFE_01061 1.6e-200 phnD - - P ko:K02044 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Phosphonate ABC transporter
BIBIDAFE_01062 6.8e-115 usp5 - - T - - - universal stress protein
BIBIDAFE_01063 9.28e-271 dnaJ - - O ko:K03686 - ko00000,ko03029,ko03110 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
BIBIDAFE_01064 0.0 dnaK - - O ko:K04043 ko03018,ko04212,ko05152,map03018,map04212,map05152 ko00000,ko00001,ko03019,ko03029,ko03110,ko04147 Heat shock 70 kDa protein
BIBIDAFE_01065 1.89e-115 grpE - - O ko:K03687 - ko00000,ko03029,ko03110 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
BIBIDAFE_01066 2.99e-247 hrcA - - K ko:K03705 - ko00000,ko03000 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
BIBIDAFE_01067 1.83e-231 ribF 2.7.1.26, 2.7.7.2 - H ko:K11753 ko00740,ko01100,ko01110,map00740,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Belongs to the ribF family
BIBIDAFE_01068 1.42e-212 truB 5.4.99.25 - J ko:K03177,ko:K03483 - ko00000,ko01000,ko03000,ko03016 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
BIBIDAFE_01069 1.37e-78 rbfA - - J ko:K02834 - ko00000,ko03009 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
BIBIDAFE_01070 0.0 infB - - J ko:K02519 - ko00000,ko03012,ko03029 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
BIBIDAFE_01071 1.32e-63 ylxQ - - J - - - ribosomal protein
BIBIDAFE_01072 2.64e-63 ylxR - - K ko:K07742 - ko00000 Protein of unknown function (DUF448)
BIBIDAFE_01073 3.24e-271 nusA - - K ko:K02600 - ko00000,ko03009,ko03021 Participates in both transcription termination and antitermination
BIBIDAFE_01074 1.18e-108 rimP - - J ko:K09748 - ko00000,ko03009 Required for maturation of 30S ribosomal subunits
BIBIDAFE_01075 0.0 polC 2.7.7.7 - L ko:K03763 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
BIBIDAFE_01076 0.0 proS 6.1.1.15 - J ko:K01881 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
BIBIDAFE_01077 1.57e-254 rseP - - M ko:K11749 ko02024,ko04112,map02024,map04112 ko00000,ko00001,ko01000,ko01002 zinc metalloprotease
BIBIDAFE_01078 1.62e-189 cdsA 2.7.7.41 - I ko:K00981 ko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070 ko00000,ko00001,ko00002,ko01000 Belongs to the CDS family
BIBIDAFE_01079 1.91e-179 uppS 2.5.1.31 - H ko:K00806 ko00900,ko01110,map00900,map01110 ko00000,ko00001,ko01000,ko01006 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
BIBIDAFE_01080 8.57e-122 frr - - J ko:K02838 - ko00000,ko03012 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
BIBIDAFE_01081 4.12e-168 pyrH 2.7.4.22 - F ko:K09903 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko01000 Catalyzes the reversible phosphorylation of UMP to UDP
BIBIDAFE_01082 1.84e-237 tsf - - J ko:K02357 - ko00000,ko03012,ko03029 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
BIBIDAFE_01083 2.69e-181 rpsB - - J ko:K02967 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the universal ribosomal protein uS2 family
BIBIDAFE_01084 1.1e-255 yabB 2.1.1.223 - L ko:K07461,ko:K15460 - ko00000,ko01000,ko03016 Methyltransferase small domain
BIBIDAFE_01085 2.26e-149 plsC 2.3.1.51 - I ko:K00655 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko01004 Acyltransferase
BIBIDAFE_01086 2.67e-295 cfa 2.1.1.79 - M ko:K00574 - ko00000,ko01000 cyclopropane-fatty-acyl-phospholipid synthase
BIBIDAFE_01087 0.0 pepO - - O ko:K07386 - ko00000,ko01000,ko01002 Peptidase family M13
BIBIDAFE_01088 0.0 mdlB - - V ko:K06147,ko:K18890 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter
BIBIDAFE_01089 4.01e-189 mdlA - - V ko:K06148,ko:K18889 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter
BIBIDAFE_01090 7.32e-143 - - - L ko:K07496 - ko00000 Transposase
BIBIDAFE_01091 4.87e-76 - - - S - - - Alpha beta hydrolase
BIBIDAFE_01092 3.33e-49 - - - S ko:K06889 - ko00000 Hydrolases of the alpha beta superfamily
BIBIDAFE_01093 2.82e-185 nfrA 1.5.1.38 - C ko:K19285 ko00740,ko01100,map00740,map01100 ko00000,ko00001,ko01000 nitroreductase
BIBIDAFE_01094 7.13e-63 - 1.1.1.3 - T ko:K00003,ko:K07166 ko00260,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00270,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 phosphoserine phosphatase activity
BIBIDAFE_01095 8.3e-110 - - - K - - - Bacterial regulatory proteins, tetR family
BIBIDAFE_01096 4.23e-141 - - - K ko:K09705 - ko00000 NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
BIBIDAFE_01097 3.31e-122 - - - K - - - NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
BIBIDAFE_01098 9.8e-197 - - - K - - - COG COG0846 NAD-dependent protein deacetylases, SIR2 family
BIBIDAFE_01099 1.3e-121 - - - K - - - acetyltransferase
BIBIDAFE_01100 1.7e-111 dps - - P ko:K04047 - ko00000,ko03036 Belongs to the Dps family
BIBIDAFE_01101 2.8e-201 snf - - KL - - - domain protein
BIBIDAFE_01102 1.57e-136 plsY 2.3.1.15 - I ko:K08591 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko01004 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
BIBIDAFE_01103 0.0 parE - - L ko:K02622 - ko00000,ko01000,ko02048,ko03032,ko03036 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
BIBIDAFE_01104 0.0 parC - - L ko:K02621 - ko00000,ko01000,ko02048,ko03032,ko03036 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
BIBIDAFE_01105 2.44e-217 - - - K - - - Transcriptional regulator
BIBIDAFE_01106 7.36e-222 ppaC 3.6.1.1 - C ko:K15986 ko00190,map00190 ko00000,ko00001,ko01000 inorganic pyrophosphatase
BIBIDAFE_01107 2.56e-141 ppiB 5.2.1.8 - G ko:K03768 - ko00000,ko01000,ko03110 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
BIBIDAFE_01108 5.46e-74 - - - K - - - Helix-turn-helix domain
BIBIDAFE_01109 3.84e-62 - - - C - - - Domain of unknown function (DUF4931)
BIBIDAFE_01110 1.35e-155 - - - - - - - -
BIBIDAFE_01111 1.51e-185 XK27_08125 - - S ko:K09861 - ko00000 Belongs to the UPF0246 family
BIBIDAFE_01112 3.56e-183 - - - S ko:K06889 - ko00000 Alpha/beta hydrolase family
BIBIDAFE_01113 4.23e-145 - - - G - - - phosphoglycerate mutase
BIBIDAFE_01114 8.42e-124 - - - K - - - Bacterial regulatory proteins, tetR family
BIBIDAFE_01115 3.36e-230 yxeA - - V ko:K02004 - ko00000,ko00002,ko02000 ABC transporter permease
BIBIDAFE_01116 3.4e-154 lolD - - V ko:K02003 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
BIBIDAFE_01117 0.0 pepD4 - - E ko:K08659 - ko00000,ko01000,ko01002 Dipeptidase
BIBIDAFE_01118 2.29e-14 - - - - - - - -
BIBIDAFE_01119 8.35e-114 - - - - - - - -
BIBIDAFE_01120 4.29e-171 - - - K - - - Helix-turn-helix XRE-family like proteins
BIBIDAFE_01121 0.0 - - - S - - - SLAP domain
BIBIDAFE_01122 2.89e-91 - - - S - - - Protein of unknown function (DUF3232)
BIBIDAFE_01124 2.14e-107 - - - - - - - -
BIBIDAFE_01125 2.68e-59 - - - K - - - Helix-turn-helix XRE-family like proteins
BIBIDAFE_01126 4.07e-96 - - - K - - - Helix-turn-helix XRE-family like proteins
BIBIDAFE_01127 2.95e-145 - - - KLT - - - serine threonine protein kinase
BIBIDAFE_01128 0.0 - - - V ko:K06147,ko:K06148 - ko00000,ko02000 ABC transporter transmembrane region
BIBIDAFE_01129 4.93e-36 - - - - - - - -
BIBIDAFE_01130 4.41e-158 gntR1 - - K ko:K03710 - ko00000,ko03000 UTRA
BIBIDAFE_01131 4.27e-274 - - - - - - - -
BIBIDAFE_01134 1.33e-173 slpX - - S - - - SLAP domain
BIBIDAFE_01135 9.63e-14 pfoSR - - S ko:K07035 - ko00000 Phosphotransferase system, EIIC
BIBIDAFE_01136 9.34e-98 pfoSR - - S ko:K07035 - ko00000 Phosphotransferase system, EIIC
BIBIDAFE_01137 4.12e-24 pfoSR - - S ko:K07035 - ko00000 Phosphotransferase system, EIIC
BIBIDAFE_01139 5.03e-109 - - - S - - - SLAP domain
BIBIDAFE_01140 5.4e-226 prs 2.7.6.1 - F ko:K00948 ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
BIBIDAFE_01141 9.99e-69 - - - GK - - - ROK family
BIBIDAFE_01142 4.7e-87 - - - GK - - - ROK family
BIBIDAFE_01143 5.78e-57 - - - - - - - -
BIBIDAFE_01144 0.0 - - - S ko:K06885 - ko00000 Metal dependent phosphohydrolases with conserved 'HD' motif.
BIBIDAFE_01145 2.02e-88 - - - S - - - Domain of unknown function (DUF1934)
BIBIDAFE_01146 1.25e-114 rpoE - - K ko:K03048 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 br01611,ko00000,ko00001,ko00002,ko03021,ko03400 Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
BIBIDAFE_01147 0.0 pyrG 6.3.4.2 - F ko:K01937 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
BIBIDAFE_01148 5.42e-312 murA 2.5.1.7 - M ko:K00790 ko00520,ko00550,ko01100,map00520,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
BIBIDAFE_01149 5.53e-43 - - - S - - - Haloacid dehalogenase-like hydrolase
BIBIDAFE_01150 2.45e-62 - - - S - - - Haloacid dehalogenase-like hydrolase
BIBIDAFE_01151 0.0 pepDA - - E ko:K08659 - ko00000,ko01000,ko01002 Dipeptidase
BIBIDAFE_01152 1.65e-204 msmR - - K - - - AraC-like ligand binding domain
BIBIDAFE_01153 1.08e-287 pbuX - - F ko:K03458,ko:K16169 - ko00000,ko02000 xanthine permease
BIBIDAFE_01154 3.5e-138 xpt 2.4.2.22 - F ko:K03816 ko00230,ko01100,ko01110,map00230,map01100,map01110 ko00000,ko00001,ko01000 Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
BIBIDAFE_01155 3.01e-136 - - - K - - - DNA-binding helix-turn-helix protein
BIBIDAFE_01156 1.22e-218 - - - G - - - BadF/BadG/BcrA/BcrD ATPase family
BIBIDAFE_01157 0.0 - - - S - - - membrane
BIBIDAFE_01158 0.0 pbp2b - - M ko:K00687,ko:K12553,ko:K21465,ko:K21466 ko00550,ko01100,ko01501,map00550,map01100,map01501 ko00000,ko00001,ko01000,ko01011 Penicillin-binding Protein
BIBIDAFE_01159 6.25e-29 rpmG - - J ko:K02913 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL33 family
BIBIDAFE_01160 3.12e-129 fthC 6.3.3.2 - H ko:K01934 ko00670,ko01100,map00670,map01100 ko00000,ko00001,ko01000 Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
BIBIDAFE_01161 4.44e-151 gluP 3.4.21.105 - S ko:K19225 - ko00000,ko01000,ko01002 Rhomboid family
BIBIDAFE_01162 2.45e-44 yqgQ - - S - - - Bacterial protein of unknown function (DUF910)
BIBIDAFE_01163 1.26e-91 yqhL - - P - - - Rhodanese-like protein
BIBIDAFE_01164 2.89e-221 miaA 2.5.1.75 - F ko:K00791 ko00908,ko01100,ko01110,map00908,map01100,map01110 ko00000,ko00001,ko01000,ko01006,ko03016 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
BIBIDAFE_01165 7.19e-94 - - - L - - - IS1381, transposase OrfA
BIBIDAFE_01166 2.5e-26 ynbB - - P - - - aluminum resistance
BIBIDAFE_01167 1.01e-79 ynbB - - P - - - aluminum resistance
BIBIDAFE_01168 0.0 glnA 6.3.1.2 - E ko:K01915 ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727 ko00000,ko00001,ko01000,ko04147 glutamine synthetase
BIBIDAFE_01169 4.67e-173 - - - - - - - -
BIBIDAFE_01170 7.86e-212 - - - - - - - -
BIBIDAFE_01171 5.73e-205 - - - - - - - -
BIBIDAFE_01172 2.84e-19 - - - - - - - -
BIBIDAFE_01173 7.57e-210 yitT - - S - - - Uncharacterised 5xTM membrane BCR, YitT family COG1284
BIBIDAFE_01174 6.09e-107 - - - S - - - Peptidase family M23
BIBIDAFE_01175 4.49e-195 yqfL 2.7.11.33, 2.7.4.28 - F ko:K09773 - ko00000,ko01000 Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
BIBIDAFE_01176 4.83e-30 rpsU - - J ko:K02970 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bS21 family
BIBIDAFE_01177 5.12e-91 yqeY - - S ko:K09117 - ko00000 YqeY-like protein
BIBIDAFE_01178 3.51e-224 phoH - - T ko:K06217 - ko00000 phosphate starvation-inducible protein PhoH
BIBIDAFE_01179 1.25e-129 ybeY - - S ko:K07042 - ko00000,ko03009 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
BIBIDAFE_01180 6.28e-218 era - - S ko:K03595 - ko00000,ko03009,ko03029 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
BIBIDAFE_01181 8.01e-175 recO - - L ko:K03584 ko03440,map03440 ko00000,ko00001,ko03400 Involved in DNA repair and RecF pathway recombination
BIBIDAFE_01182 2.22e-229 glyQ 6.1.1.14 - J ko:K01878 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 glycyl-tRNA synthetase alpha subunit
BIBIDAFE_01183 0.0 glyS 6.1.1.14 - J ko:K01879 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Glycyl-tRNA synthetase beta subunit
BIBIDAFE_01184 0.0 dnaG - - L ko:K02316 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
BIBIDAFE_01185 3.14e-255 sigA - - K ko:K03086 - ko00000,ko03021 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
BIBIDAFE_01186 3.58e-162 - - - S - - - Peptidase family M23
BIBIDAFE_01187 2.2e-39 - 3.6.1.55 - F ko:K03574 - ko00000,ko01000,ko03400 NUDIX domain
BIBIDAFE_01188 4.48e-161 trmK 2.1.1.217 - S ko:K06967 - ko00000,ko01000,ko03016 SAM-dependent methyltransferase
BIBIDAFE_01189 2.43e-197 yqfO - - S - - - Belongs to the GTP cyclohydrolase I type 2 NIF3 family
BIBIDAFE_01190 2.1e-309 pepT 3.4.11.4 - E ko:K01258 - ko00000,ko01000,ko01002 Cleaves the N-terminal amino acid of tripeptides
BIBIDAFE_01191 1.67e-74 yloU - - S - - - Asp23 family, cell envelope-related function
BIBIDAFE_01192 0.0 yloV - - S ko:K07030 - ko00000 DAK2 domain fusion protein YloV
BIBIDAFE_01193 0.0 recG 3.6.4.12 - L ko:K03655 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
BIBIDAFE_01194 3.85e-235 plsX 2.3.1.15 - I ko:K03621 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko01004 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
BIBIDAFE_01195 5.34e-48 acpP - - IQ ko:K02078 - ko00000,ko00001 Carrier of the growing fatty acid chain in fatty acid biosynthesis
BIBIDAFE_01196 6.3e-251 oppD - - P ko:K02031,ko:K15583 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 Belongs to the ABC transporter superfamily
BIBIDAFE_01197 3.56e-233 oppF - - P ko:K02032 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 Belongs to the ABC transporter superfamily
BIBIDAFE_01198 7.39e-226 oppB - - P ko:K02033,ko:K02034 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter permease
BIBIDAFE_01199 3.53e-203 oppC5 - - P ko:K02034 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
BIBIDAFE_01200 0.0 oppA - - E ko:K02035 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter substrate-binding protein
BIBIDAFE_01201 0.0 oppA - - E ko:K02035 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter substrate-binding protein
BIBIDAFE_01202 1.56e-161 rnc 3.1.26.3 - J ko:K03685 ko03008,ko05205,map03008,map05205 ko00000,ko00001,ko01000,ko03009,ko03019,ko03036 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
BIBIDAFE_01203 0.0 smc - - D ko:K03529 - ko00000,ko03036 Required for chromosome condensation and partitioning
BIBIDAFE_01204 5.15e-236 ftsY - - U ko:K03110 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
BIBIDAFE_01205 0.0 serS 6.1.1.11 - J ko:K01875 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
BIBIDAFE_01206 2.48e-129 yjcK 2.3.1.128 - J ko:K03790 - ko00000,ko01000,ko03009 Acetyltransferase (GNAT) domain
BIBIDAFE_01207 2.84e-142 - - - S - - - SNARE associated Golgi protein
BIBIDAFE_01208 7.24e-199 - - - I - - - alpha/beta hydrolase fold
BIBIDAFE_01209 1e-09 plcR - - K ko:K20480 ko02024,map02024 ko00000,ko00001,ko03000 Helix-turn-helix
BIBIDAFE_01210 1.68e-163 plcR - - K ko:K20480 ko02024,map02024 ko00000,ko00001,ko03000 Helix-turn-helix
BIBIDAFE_01211 0.0 gabD 1.2.1.16, 1.2.1.20, 1.2.1.79 - C ko:K00135 ko00250,ko00310,ko00350,ko00650,ko00760,ko01100,ko01120,map00250,map00310,map00350,map00650,map00760,map01100,map01120 ko00000,ko00001,ko00002,ko01000 Belongs to the aldehyde dehydrogenase family
BIBIDAFE_01212 5.01e-216 - - - - - - - -
BIBIDAFE_01213 0.0 ydgH - - S ko:K06994 - ko00000 MMPL family
BIBIDAFE_01214 1.42e-127 yobS - - K - - - Bacterial regulatory proteins, tetR family
BIBIDAFE_01215 4.16e-210 - 3.5.2.6 - V ko:K17836 ko00311,ko01130,ko01501,map00311,map01130,map01501 ko00000,ko00001,ko00002,ko01000,ko01504 Beta-lactamase enzyme family
BIBIDAFE_01216 2.02e-216 corA - - P ko:K03284 - ko00000,ko02000 CorA-like Mg2+ transporter protein
BIBIDAFE_01217 2.21e-312 - - - G ko:K02027 - ko00000,ko00002,ko02000 Bacterial extracellular solute-binding protein
BIBIDAFE_01218 0.0 - - - S - - - Zn-dependent metallo-hydrolase RNA specificity domain
BIBIDAFE_01219 6.84e-188 - - - P ko:K02026 - ko00000,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
BIBIDAFE_01220 1.4e-203 - - - P ko:K02025 - ko00000,ko00002,ko02000 ABC-type sugar transport systems, permease components
BIBIDAFE_01221 9.81e-259 malK - - P ko:K10112,ko:K17240 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ATPases associated with a variety of cellular activities
BIBIDAFE_01222 0.0 pepD1 - - E ko:K08659 - ko00000,ko01000,ko01002 Dipeptidase
BIBIDAFE_01223 1.78e-204 endA - - F ko:K15051 - ko00000 DNA RNA non-specific endonuclease
BIBIDAFE_01224 3.22e-219 - 2.7.7.7 - L ko:K02342 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 EXOIII
BIBIDAFE_01225 1.31e-205 - - - K - - - NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
BIBIDAFE_01226 4.09e-52 - - - L - - - An automated process has identified a potential problem with this gene model
BIBIDAFE_01227 1.85e-31 - - - L - - - An automated process has identified a potential problem with this gene model
BIBIDAFE_01228 7.62e-07 ybcH - - D ko:K06889 - ko00000 Alpha beta
BIBIDAFE_01229 1.62e-62 - - - - - - - -
BIBIDAFE_01230 2.31e-277 mvaS 2.3.3.10 - I ko:K01641 ko00072,ko00280,ko00650,ko00900,ko01100,ko01110,ko01130,map00072,map00280,map00650,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Hydroxymethylglutaryl-CoA synthase
BIBIDAFE_01231 2.8e-277 mvaA 1.1.1.88, 2.3.1.9 - C ko:K00054,ko:K00626 ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the HMG-CoA reductase family
BIBIDAFE_01232 2.49e-276 atoB 1.1.1.88, 2.3.1.9 - I ko:K00054,ko:K00626 ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the thiolase family
BIBIDAFE_01233 1.59e-158 - - - L ko:K07496 - ko00000 transposase, IS605 OrfB family
BIBIDAFE_01234 6.01e-32 - - - L ko:K07496 - ko00000 transposase, IS605 OrfB family
BIBIDAFE_01235 2.45e-214 galU 2.7.7.9 - M ko:K00963 ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130 ko00000,ko00001,ko00002,ko01000 UTP-glucose-1-phosphate uridylyltransferase
BIBIDAFE_01236 2.27e-198 rbn - - S ko:K07058 - ko00000 Belongs to the UPF0761 family
BIBIDAFE_01237 1.72e-211 map 3.4.11.18 - E ko:K01265 - ko00000,ko01000,ko01002 Methionine Aminopeptidase
BIBIDAFE_01238 3.48e-103 ykuP - - C ko:K03839 - ko00000 Flavodoxin
BIBIDAFE_01239 2.9e-117 gtcA1 - - S - - - Teichoic acid glycosylation protein
BIBIDAFE_01240 7.71e-277 mnaA 5.1.3.14 - G ko:K01791 ko00520,ko01100,ko05111,map00520,map01100,map05111 ko00000,ko00001,ko00002,ko01000,ko01005 Belongs to the UDP-N-acetylglucosamine 2-epimerase family
BIBIDAFE_01241 2.14e-35 - - - - - - - -
BIBIDAFE_01243 2.82e-315 chbC - - G ko:K02761 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko02000 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
BIBIDAFE_01244 2.34e-268 yfmL - - L - - - DEAD DEAH box helicase
BIBIDAFE_01245 2.06e-46 lys - - M ko:K07273 - ko00000 Glycosyl hydrolases family 25
BIBIDAFE_01246 6.71e-241 cggR - - K ko:K05311 - ko00000,ko03000 Putative sugar-binding domain
BIBIDAFE_01247 9.97e-245 gap 1.2.1.12 - G ko:K00134 ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
BIBIDAFE_01248 6.01e-288 pgk 2.7.2.3 - F ko:K00927 ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the phosphoglycerate kinase family
BIBIDAFE_01249 1.34e-183 tpiA 5.3.1.1 - G ko:K01803 ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko04147 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
BIBIDAFE_01250 4.35e-125 - - - - - - - -
BIBIDAFE_01251 1.52e-205 ycsE - - S - - - Sucrose-6F-phosphate phosphohydrolase
BIBIDAFE_01252 2.33e-174 ung 3.2.2.27 - L ko:K03648 ko03410,ko05340,map03410,map05340 ko00000,ko00001,ko01000,ko03400 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
BIBIDAFE_01253 3.84e-233 pta 2.3.1.8, 3.6.3.21 - C ko:K00625,ko:K02028 ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000,ko02000 phosphate acetyltransferase
BIBIDAFE_01254 1.87e-118 ydiB - - O ko:K06925 - ko00000,ko03016 Hydrolase, P-loop family
BIBIDAFE_01255 1.06e-127 dnaQ 2.7.7.7 - L ko:K02342 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase III
BIBIDAFE_01256 1.47e-210 murB 1.3.1.98 - M ko:K00075 ko00520,ko00550,ko01100,map00520,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Cell wall formation
BIBIDAFE_01257 1.56e-238 potA 3.6.3.30, 3.6.3.31 - P ko:K02010,ko:K11072 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
BIBIDAFE_01258 8.77e-173 potB - - P ko:K11071 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter permease
BIBIDAFE_01259 3.23e-180 potC - - P ko:K11070 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter permease
BIBIDAFE_01260 1.71e-266 potD - - P ko:K11069 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter
BIBIDAFE_01261 8.69e-194 dacA 2.7.7.85 - S ko:K18672 - ko00000,ko01000 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
BIBIDAFE_01262 5.29e-218 ybbR - - S - - - YbbR-like protein
BIBIDAFE_01263 0.0 glmM 5.4.2.10 - G ko:K03431 ko00520,ko01100,ko01130,map00520,map01100,map01130 ko00000,ko00001,ko01000 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
BIBIDAFE_01264 1.76e-193 - - - S - - - hydrolase
BIBIDAFE_01265 7.18e-193 - - - S - - - Sucrose-6F-phosphate phosphohydrolase
BIBIDAFE_01266 1.31e-153 - - - - - - - -
BIBIDAFE_01267 2.06e-112 ptpA 3.1.3.48 - T ko:K01104 - ko00000,ko01000 Belongs to the low molecular weight phosphotyrosine protein phosphatase family
BIBIDAFE_01268 5.85e-274 glxK 2.7.1.165 - G ko:K00865 ko00260,ko00561,ko00630,ko01100,ko01120,ko01130,map00260,map00561,map00630,map01100,map01120,map01130 ko00000,ko00001,ko01000 Belongs to the glycerate kinase type-1 family
BIBIDAFE_01269 1.93e-83 bglG5 - - K ko:K03488 - ko00000,ko03000 CAT RNA binding domain
BIBIDAFE_01270 2.58e-81 bglG5 - - K ko:K03488 - ko00000,ko03000 CAT RNA binding domain
BIBIDAFE_01271 0.0 pts33BCA - - G ko:K02755,ko:K02756,ko:K02757 ko02060,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 phosphotransferase system
BIBIDAFE_01272 1.98e-208 - 3.2.1.86 GT1 G ko:K01223 ko00010,ko00500,map00010,map00500 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 1 family
BIBIDAFE_01273 3.79e-48 - 3.2.1.86 GT1 G ko:K01223 ko00010,ko00500,map00010,map00500 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 1 family
BIBIDAFE_01274 4.65e-75 - 3.2.1.86 GT1 G ko:K01223 ko00010,ko00500,map00010,map00500 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 1 family
BIBIDAFE_01275 3.58e-237 ybcH - - D ko:K06889 - ko00000 Alpha beta
BIBIDAFE_01276 1.32e-20 - - - E - - - Amino acid permease
BIBIDAFE_01277 2.1e-208 - - - E - - - Amino acid permease
BIBIDAFE_01278 3.69e-69 - - - E - - - Amino acid permease
BIBIDAFE_01279 0.0 hsdR 3.1.21.3 - V ko:K01153 - ko00000,ko01000,ko02048 Subunit R is required for both nuclease and ATPase activities, but not for modification
BIBIDAFE_01280 7.6e-154 hsdS 3.1.21.3 - V ko:K01154 - ko00000,ko01000,ko02048 type I restriction modification DNA specificity domain
BIBIDAFE_01281 2.27e-210 - - - L - - - Belongs to the 'phage' integrase family
BIBIDAFE_01282 1.85e-68 lys - - M ko:K07273 - ko00000 Glycosyl hydrolases family 25
BIBIDAFE_01283 1.3e-46 - - - E ko:K03294 - ko00000 amino acid
BIBIDAFE_01284 1.66e-197 - - - E ko:K03294 - ko00000 amino acid
BIBIDAFE_01285 6.05e-133 hpt 2.4.2.8 - F ko:K00760 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 ko00000,ko00001,ko01000 Belongs to the purine pyrimidine phosphoribosyltransferase family
BIBIDAFE_01286 0.0 yhdP - - S - - - Transporter associated domain
BIBIDAFE_01287 2.92e-61 - - - C - - - nitroreductase
BIBIDAFE_01288 3.62e-24 - - - C - - - nitroreductase
BIBIDAFE_01289 2.03e-52 - - - - - - - -
BIBIDAFE_01290 3.8e-304 pyrP - - F ko:K02824 - ko00000,ko02000 Permease
BIBIDAFE_01291 2.69e-116 pyrR 2.4.2.9 - F ko:K02825 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko01000,ko03000 Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
BIBIDAFE_01292 0.0 qacA - - EGP - - - Major Facilitator
BIBIDAFE_01293 6.58e-275 pmrA - - EGP ko:K08161 - ko00000,ko02000 MFS_1 like family
BIBIDAFE_01294 3.59e-265 pepA - - E - - - M42 glutamyl aminopeptidase
BIBIDAFE_01295 5.02e-149 ykpA - - S - - - ABC transporter, ATP-binding protein
BIBIDAFE_01296 4.34e-157 ykpA - - S - - - ABC transporter, ATP-binding protein
BIBIDAFE_01297 1.18e-14 - - - - - - - -
BIBIDAFE_01298 1.51e-161 - - - - - - - -
BIBIDAFE_01299 7.51e-166 - - - F - - - glutamine amidotransferase
BIBIDAFE_01300 9.06e-192 peb1A - - ET ko:K10039 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter
BIBIDAFE_01301 1.07e-105 - - - K - - - Transcriptional regulator, MarR family
BIBIDAFE_01302 0.0 XK27_09600 - - V ko:K06147,ko:K18891 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter, ATP-binding protein
BIBIDAFE_01303 0.0 XK27_09605 - - V ko:K18892 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter transmembrane region
BIBIDAFE_01304 3.62e-131 ykoE - - S ko:K16925 - ko00000,ko00002,ko02000 ABC-type cobalt transport system, permease component
BIBIDAFE_01305 1.28e-85 nusB - - K ko:K03625 - ko00000,ko03009,ko03021 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
BIBIDAFE_01306 3.98e-92 WQ51_04310 - - S ko:K10947 - ko00000,ko03000 Asp23 family, cell envelope-related function
BIBIDAFE_01307 1.04e-133 efp - - J ko:K02356 - ko00000,ko03012 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
BIBIDAFE_01308 1.99e-262 pepP 3.4.11.9, 3.4.13.9 - E ko:K01262,ko:K01271 - ko00000,ko01000,ko01002 Creatinase/Prolidase N-terminal domain
BIBIDAFE_01309 1.6e-63 rpmA - - J ko:K02899 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL27 family
BIBIDAFE_01310 3.38e-66 rplU - - J ko:K02888 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This protein binds to 23S rRNA in the presence of protein L20
BIBIDAFE_01311 0.0 - - - S - - - Uncharacterized protein conserved in bacteria (DUF2325)
BIBIDAFE_01312 1.62e-256 ilvE 2.6.1.42 - E ko:K00826 ko00270,ko00280,ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00270,map00280,map00290,map00770,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Branched-chain amino acid aminotransferase
BIBIDAFE_01313 2.83e-167 - - - S - - - Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
BIBIDAFE_01314 4.18e-38 dmpI 5.3.2.6 - G ko:K01821 ko00362,ko00621,ko00622,ko01100,ko01120,ko01220,map00362,map00621,map00622,map01100,map01120,map01220 ko00000,ko00001,ko00002,ko01000 Belongs to the 4-oxalocrotonate tautomerase family
BIBIDAFE_01315 0.0 - - - S - - - Predicted membrane protein (DUF2207)
BIBIDAFE_01316 3.23e-274 - - - M ko:K07273 - ko00000 Glycosyl hydrolases family 25
BIBIDAFE_01318 4.47e-230 lipA - - I - - - Carboxylesterase family
BIBIDAFE_01319 2.21e-87 yusI 1.20.4.1 - P ko:K00537 - ko00000,ko01000 Belongs to the ArsC family
BIBIDAFE_01320 7.06e-30 - - - - - - - -
BIBIDAFE_01321 0.0 pepX 3.4.14.11 - E ko:K01281 - ko00000,ko01000,ko01002 Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
BIBIDAFE_01322 5.88e-103 msrB 1.8.4.12 - O ko:K07305 - ko00000,ko01000 peptide methionine sulfoxide reductase
BIBIDAFE_01323 1.9e-65 - - - - - - - -
BIBIDAFE_01324 1.83e-194 - - - U ko:K05340 - ko00000,ko02000 sugar transport
BIBIDAFE_01326 9.14e-50 - - - - - - - -
BIBIDAFE_01327 4.63e-119 bioY - - S ko:K03523 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 BioY family
BIBIDAFE_01328 1.3e-240 birA 6.3.4.15 - H ko:K03524 ko00780,ko01100,map00780,map01100 ko00000,ko00001,ko01000,ko03000 Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
BIBIDAFE_01329 2.68e-174 fabI 1.3.1.10, 1.3.1.9 - I ko:K00208 ko00061,ko00333,ko00780,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01100,map01130,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 Enoyl- acyl-carrier-protein reductase NADH
BIBIDAFE_01330 5.24e-183 accA 2.1.3.15, 6.4.1.2 - I ko:K01962 ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212 ko00000,ko00001,ko00002,ko01000 alpha subunit
BIBIDAFE_01331 1.25e-202 accD 2.1.3.15, 6.4.1.2 - I ko:K01963 ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212 ko00000,ko00001,ko00002,ko01000 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
BIBIDAFE_01332 0.0 accC 6.3.4.14, 6.4.1.2 - I ko:K01961 ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212 ko00000,ko00001,ko00002,ko01000 Acetyl-CoA carboxylase biotin carboxylase subunit
BIBIDAFE_01333 6.93e-96 fabZ2 4.2.1.59 - I ko:K02372 ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 FabA-like domain
BIBIDAFE_01334 1.05e-101 accB - - I ko:K02160 ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212 ko00000,ko00001,ko00002 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
BIBIDAFE_01335 7.69e-294 fabF 2.3.1.179 - I ko:K09458 ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
BIBIDAFE_01336 6.55e-166 fabG 1.1.1.100 - IQ ko:K00059 ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 reductase
BIBIDAFE_01337 8.57e-218 fabD 2.3.1.39 - I ko:K00645,ko:K15327,ko:K15329 ko00061,ko00333,ko01100,ko01130,ko01212,map00061,map00333,map01100,map01130,map01212 ko00000,ko00001,ko00002,ko01000,ko01004,ko01008 Malonyl CoA-acyl carrier protein transacylase
BIBIDAFE_01338 6.25e-47 acpP - - IQ ko:K02078 - ko00000,ko00001 Carrier of the growing fatty acid chain in fatty acid biosynthesis
BIBIDAFE_01339 2.59e-230 fabH 2.3.1.180 - I ko:K00648 ko00061,ko01100,ko01212,map00061,map01100,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
BIBIDAFE_01340 1.24e-104 - - - K - - - Transcriptional regulator
BIBIDAFE_01341 5.77e-102 fabZ 4.2.1.59 - I ko:K02372 ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
BIBIDAFE_01342 3.86e-242 pdp 2.4.2.2 - F ko:K00756 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko01000 pyrimidine-nucleoside phosphorylase
BIBIDAFE_01343 4.53e-41 - - - S - - - Transglycosylase associated protein
BIBIDAFE_01344 5.35e-133 - - - L - - - Resolvase, N terminal domain
BIBIDAFE_01345 1.47e-164 - - - L ko:K07485 - ko00000 Transposase
BIBIDAFE_01346 3.24e-80 tnpA1 - - L - - - PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
BIBIDAFE_01347 1.02e-204 glcU - - U ko:K05340 - ko00000,ko02000 sugar transport
BIBIDAFE_01348 4.43e-99 tnpA1 - - L - - - PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
BIBIDAFE_01349 1.12e-88 - - - S - - - CAAX protease self-immunity
BIBIDAFE_01352 1.28e-213 - - - S - - - SLAP domain
BIBIDAFE_01353 1.68e-98 - - - S - - - Bacteriocin helveticin-J
BIBIDAFE_01354 1.48e-56 - - - - - - - -
BIBIDAFE_01355 3.46e-51 - - - K - - - Helix-turn-helix XRE-family like proteins
BIBIDAFE_01356 6.32e-61 - - - E - - - Zn peptidase
BIBIDAFE_01357 5.57e-251 - - - EGP - - - Major facilitator Superfamily
BIBIDAFE_01358 1.49e-152 ywdE - - K ko:K20375 ko02024,map02024 ko00000,ko00001,ko03000 Transcriptional regulator
BIBIDAFE_01359 0.0 traA - - L - - - MobA MobL family protein
BIBIDAFE_01360 0.0 traI 5.99.1.2 - L ko:K03169 - ko00000,ko01000,ko03032 This gene contains a nucleotide ambiguity which may be the result of a sequencing error
BIBIDAFE_01361 3.6e-42 - - - - - - - -
BIBIDAFE_01362 2.48e-254 - - - L - - - Psort location Cytoplasmic, score
BIBIDAFE_01363 1.97e-316 tnp2 - - L ko:K07485 - ko00000 Transposase
BIBIDAFE_01364 6.41e-290 nhaC - - C ko:K03315 - ko00000,ko02000 Na H antiporter NhaC
BIBIDAFE_01365 1.12e-112 pfoSR - - S ko:K07035 - ko00000 Phosphotransferase system, EIIC
BIBIDAFE_01366 1.13e-222 ldhD 1.1.1.28 - CH ko:K03778 ko00620,ko01120,map00620,map01120 ko00000,ko00001,ko01000 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BIBIDAFE_01367 2.69e-276 aspC 2.6.1.57 - E ko:K00832,ko:K00841 ko00270,ko00300,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01230,map00270,map00300,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Aminotransferase
BIBIDAFE_01368 4.25e-14 - - - - - - - -
BIBIDAFE_01369 9.22e-98 WQ51_05710 - - S - - - Mitochondrial biogenesis AIM24
BIBIDAFE_01370 9.97e-245 - - - L - - - Transposase and inactivated derivatives, IS30 family
BIBIDAFE_01371 6.42e-149 - - - S - - - Abortive infection C-terminus
BIBIDAFE_01373 2.14e-173 nfrA 1.5.1.38 - C ko:K19285 ko00740,ko01100,map00740,map01100 ko00000,ko00001,ko01000 nitroreductase
BIBIDAFE_01374 2.73e-127 pinR1 - - L - - - Helix-turn-helix domain of Hin and related proteins, a family of DNA-binding domains unique to bacteria and represented by the Hin protein of Salmonella. The basic HTH domain is a simple fold comprised of three core helices that form a right-handed
BIBIDAFE_01376 1.69e-277 B4168_4126 - - L ko:K07493 - ko00000 Transposase
BIBIDAFE_01377 9.05e-144 - - - P ko:K06148 - ko00000,ko02000 ABC transporter
BIBIDAFE_01378 1.12e-63 - - - L - - - COG2826 Transposase and inactivated derivatives, IS30 family
BIBIDAFE_01379 9.79e-119 - - - - - - - -
BIBIDAFE_01380 3.6e-35 - - - - - - - -
BIBIDAFE_01381 3.09e-66 - - - - - - - -
BIBIDAFE_01382 2.34e-135 - 2.7.1.211 - G ko:K02755,ko:K02756,ko:K02757,ko:K02777,ko:K02808,ko:K02809,ko:K02810 ko00010,ko00500,ko00520,ko02026,ko02060,ko05111,map00010,map00500,map00520,map02026,map02060,map05111 ko00000,ko00001,ko00002,ko01000,ko02000 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
BIBIDAFE_01383 1.19e-19 scrR - - K ko:K02529,ko:K03484 - ko00000,ko03000 Transcriptional regulator, LacI family
BIBIDAFE_01384 2.49e-118 scrR - - K ko:K02529,ko:K03484 - ko00000,ko03000 Transcriptional regulator, LacI family
BIBIDAFE_01385 1.53e-162 - - - S - - - membrane
BIBIDAFE_01386 1.15e-103 - - - K - - - LytTr DNA-binding domain
BIBIDAFE_01387 1.38e-149 rex - - K ko:K01926 - ko00000,ko03000 Modulates transcription in response to changes in cellular NADH NAD( ) redox state
BIBIDAFE_01388 0.0 ydiF - - S ko:K06158 - ko00000,ko03012 ABC transporter, ATP-binding protein
BIBIDAFE_01389 9.52e-18 spxB 1.2.3.3, 1.2.5.1, 2.2.1.6, 4.1.1.8 - EH ko:K00156,ko:K00158,ko:K01577,ko:K01652 ko00290,ko00620,ko00630,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00620,map00630,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the TPP enzyme family
BIBIDAFE_01390 4.17e-271 spxB 1.2.3.3, 1.2.5.1, 2.2.1.6, 4.1.1.8 - EH ko:K00156,ko:K00158,ko:K01577,ko:K01652 ko00290,ko00620,ko00630,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00620,map00630,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the TPP enzyme family
BIBIDAFE_01391 3.98e-45 spxB 1.2.3.3, 1.2.5.1, 2.2.1.6, 4.1.1.8 - EH ko:K00156,ko:K00158,ko:K01577,ko:K01652 ko00290,ko00620,ko00630,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00620,map00630,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the TPP enzyme family
BIBIDAFE_01392 6.05e-35 frc 2.8.3.16 - C ko:K07749 - ko00000,ko01000 Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
BIBIDAFE_01393 2.85e-92 frc 2.8.3.16 - C ko:K07749 - ko00000,ko01000 Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
BIBIDAFE_01394 5.17e-102 frc 2.8.3.16 - C ko:K07749 - ko00000,ko01000 Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
BIBIDAFE_01395 5.01e-299 bbsF_1 2.8.3.19 - C ko:K18702 - ko00000,ko01000 Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
BIBIDAFE_01396 1.9e-19 - - - S - - - Toxin ToxN, type III toxin-antitoxin system
BIBIDAFE_01397 2.04e-79 - - - S - - - Uncharacterised protein family (UPF0236)
BIBIDAFE_01398 3.28e-98 - - - S - - - Uncharacterised protein family (UPF0236)
BIBIDAFE_01399 3.28e-295 pbuG - - S ko:K06901 - ko00000,ko02000 permease
BIBIDAFE_01400 3.74e-171 - - - K - - - helix_turn_helix, mercury resistance
BIBIDAFE_01401 4.19e-13 - - - S ko:K07133 - ko00000 cog cog1373
BIBIDAFE_01402 1.66e-15 - - - M - - - NlpC/P60 family
BIBIDAFE_01403 3.43e-28 - - - M - - - NlpC/P60 family
BIBIDAFE_01404 3.45e-118 - - - M - - - NlpC/P60 family
BIBIDAFE_01405 2.99e-187 - - - G - - - Peptidase_C39 like family
BIBIDAFE_01406 3.8e-35 - - - - - - - -
BIBIDAFE_01408 4.93e-41 - - - - - - - -
BIBIDAFE_01410 0.0 - - - S - - - SLAP domain
BIBIDAFE_01411 1.51e-11 - - - - - - - -
BIBIDAFE_01413 3.81e-111 prtB 3.4.21.96 - O ko:K01361 - ko00000,ko01000,ko01002,ko03110 Belongs to the peptidase S8 family
BIBIDAFE_01414 8.96e-88 prtB 3.4.21.96 - O ko:K01361 - ko00000,ko01000,ko01002,ko03110 Belongs to the peptidase S8 family
BIBIDAFE_01415 4.82e-42 - - - M - - - LPXTG-motif cell wall anchor domain protein
BIBIDAFE_01416 2.71e-25 - - - M - - - LPXTG-motif cell wall anchor domain protein
BIBIDAFE_01417 1.28e-48 - - - M - - - LPXTG-motif cell wall anchor domain protein
BIBIDAFE_01418 5.26e-34 - - - M - - - LPXTG-motif cell wall anchor domain protein
BIBIDAFE_01419 2.45e-75 - - - CO ko:K03671 ko04621,ko05418,map04621,map05418 ko00000,ko00001,ko03110 Thioredoxin
BIBIDAFE_01420 3.56e-152 - - - K - - - Rhodanese Homology Domain
BIBIDAFE_01421 1.13e-223 trxB 1.8.1.9 - C ko:K00384 ko00450,map00450 ko00000,ko00001,ko01000 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
BIBIDAFE_01422 1.11e-15 frnE 5.3.4.1 - Q ko:K01829 - ko00000,ko01000 DSBA-like thioredoxin domain
BIBIDAFE_01423 1.53e-24 frnE 5.3.4.1 - Q ko:K01829 - ko00000,ko01000 DSBA-like thioredoxin domain
BIBIDAFE_01424 2.37e-39 frnE 5.3.4.1 - Q ko:K01829 - ko00000,ko01000 DSBA-like thioredoxin domain
BIBIDAFE_01425 6.49e-35 - - - S - - - PD-(D/E)XK nuclease family transposase
BIBIDAFE_01426 3.18e-41 XK26_06720 - - S ko:K09976 - ko00000 Uncharacterised protein family (UPF0154)
BIBIDAFE_01427 3.19e-50 ynzC - - S - - - UPF0291 protein
BIBIDAFE_01428 2.07e-147 lexA 3.4.21.88 - K ko:K01356 - ko00000,ko00002,ko01000,ko01002,ko03400 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
BIBIDAFE_01429 2.44e-190 - - - E - - - GDSL-like Lipase/Acylhydrolase family
BIBIDAFE_01430 2.26e-58 ung2 3.2.2.27 - L ko:K21929 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 Uracil-DNA glycosylase
BIBIDAFE_01431 4.03e-82 rplS - - J ko:K02884 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
BIBIDAFE_01432 2.41e-175 trmD 2.1.1.228 - J ko:K00554 - ko00000,ko01000,ko03016 Belongs to the RNA methyltransferase TrmD family
BIBIDAFE_01433 4.2e-122 rimM - - J ko:K02860 - ko00000,ko03009 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
BIBIDAFE_01434 2.36e-60 rpsP - - J ko:K02959 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011,ko03029 Belongs to the bacterial ribosomal protein bS16 family
BIBIDAFE_01435 3.29e-290 ffh 3.6.5.4 - U ko:K03106 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko01000,ko02044 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
BIBIDAFE_01436 1.17e-73 ylxM - - S ko:K09787 - ko00000 Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
BIBIDAFE_01437 5.89e-172 - - - L - - - Transposase and inactivated derivatives, IS30 family
BIBIDAFE_01438 0.0 ctrA - - E ko:K03294 - ko00000 amino acid
BIBIDAFE_01439 1.38e-59 - - - - - - - -
BIBIDAFE_01440 0.0 pepD2 - - E ko:K08659 - ko00000,ko01000,ko01002 Dipeptidase
BIBIDAFE_01442 1.19e-200 - - - P ko:K16785 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC-type cobalt transport system permease component CbiQ and related transporters
BIBIDAFE_01443 0.0 - - - S ko:K16786,ko:K16787 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 AAA domain, putative AbiEii toxin, Type IV TA system
BIBIDAFE_01444 8.29e-161 - - - S ko:K16927 - ko00000,ko00002,ko02000 ECF-type riboflavin transporter, S component
BIBIDAFE_01445 4.09e-109 - - - U - - - FFAT motif binding
BIBIDAFE_01446 5.99e-55 - - - U - - - FFAT motif binding
BIBIDAFE_01447 3.12e-70 eutP - - E ko:K04029 - ko00000 Ethanolamine utilisation - propanediol utilisation
BIBIDAFE_01448 7.06e-81 lexA - - K ko:K07979 - ko00000,ko03000 Transcriptional regulator, GntR family
BIBIDAFE_01449 3.65e-159 - - - V ko:K01990 - ko00000,ko00002,ko02000 ATPases associated with a variety of cellular activities
BIBIDAFE_01450 2.37e-187 - - - - - - - -
BIBIDAFE_01451 7.98e-188 - - - - - - - -
BIBIDAFE_01452 7.15e-179 - - - - - - - -
BIBIDAFE_01453 6.04e-41 rarA - - L ko:K07478 - ko00000 recombination factor protein RarA
BIBIDAFE_01454 7.32e-77 rarA - - L ko:K07478 - ko00000 recombination factor protein RarA
BIBIDAFE_01455 7.83e-38 - - - - - - - -
BIBIDAFE_01456 4.23e-46 - - - L - - - An automated process has identified a potential problem with this gene model
BIBIDAFE_01457 4.46e-226 lacX 5.1.3.3 - G ko:K01785 ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130 ko00000,ko00001,ko00002,ko01000 Aldose 1-epimerase
BIBIDAFE_01458 3.15e-311 hslU - - O ko:K03667 - ko00000,ko03110 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
BIBIDAFE_01459 2.32e-116 hslV 3.4.25.2 - O ko:K01419 - ko00000,ko01000,ko01002 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
BIBIDAFE_01460 1.6e-216 xerC - - D ko:K03733,ko:K04763 - ko00000,ko03036 Phage integrase, N-terminal SAM-like domain
BIBIDAFE_01461 0.0 trmFO 2.1.1.74 - J ko:K04094 - ko00000,ko01000,ko03016,ko03036 Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
BIBIDAFE_01462 0.0 topA 5.99.1.2 - L ko:K03168 - ko00000,ko01000,ko03032,ko03400 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
BIBIDAFE_01463 8.1e-200 dprA - - LU ko:K04096 - ko00000 DNA protecting protein DprA
BIBIDAFE_01464 5.41e-173 rnhB 3.1.26.4 - L ko:K03470 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
BIBIDAFE_01465 4.72e-204 rbgA - - S ko:K14540 - ko00000,ko03009 Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
BIBIDAFE_01466 0.0 nhaP4 - - P ko:K03316 - ko00000 Sodium proton antiporter
BIBIDAFE_01467 9.85e-49 yozE - - S - - - Belongs to the UPF0346 family
BIBIDAFE_01468 2.03e-191 degV3 - - S - - - Uncharacterised protein, DegV family COG1307
BIBIDAFE_01469 2.1e-151 hlyIII - - S ko:K11068 - ko00000,ko02042 protein, hemolysin III
BIBIDAFE_01470 1.79e-287 cca 2.7.7.72 - J ko:K00974 ko03013,map03013 ko00000,ko00001,ko01000,ko03016 Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
BIBIDAFE_01471 6.18e-206 XK27_10395 - - S - - - Uncharacterised 5xTM membrane BCR, YitT family COG1284
BIBIDAFE_01472 5.23e-295 XK27_05225 - - S - - - Tetratricopeptide repeat protein
BIBIDAFE_01473 8.21e-57 hup - - L ko:K03530 - ko00000,ko03032,ko03036,ko03400 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
BIBIDAFE_01474 1.28e-312 der - - S ko:K03977 - ko00000,ko03009 GTPase that plays an essential role in the late steps of ribosome biogenesis
BIBIDAFE_01475 8.03e-277 rpsA - - J ko:K02945 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal protein S1
BIBIDAFE_01476 1.81e-149 cmk 2.7.4.25 - F ko:K00945 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the cytidylate kinase family. Type 1 subfamily
BIBIDAFE_01477 5.14e-58 - - - M - - - Lysin motif
BIBIDAFE_01478 4.21e-146 ribU - - U - - - Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
BIBIDAFE_01479 1.1e-166 rluB 5.4.99.22 - J ko:K06178 - ko00000,ko01000,ko03009 Belongs to the pseudouridine synthase RsuA family
BIBIDAFE_01480 8.17e-135 scpB - - D ko:K06024 - ko00000,ko03036 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
BIBIDAFE_01481 4.26e-168 scpA - - D ko:K05896 - ko00000,ko03036 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
BIBIDAFE_01482 1.62e-80 ribT - - K ko:K02859 - ko00000 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
BIBIDAFE_01483 1.48e-216 xerD - - D ko:K04763 - ko00000,ko03036 recombinase XerD
BIBIDAFE_01484 1.08e-216 yitL - - S ko:K00243 - ko00000 S1 domain
BIBIDAFE_01485 0.0 pyk 2.7.1.40 - G ko:K00873 ko00010,ko00230,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko04930,ko05165,ko05203,ko05230,map00010,map00230,map00620,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map04930,map05165,map05203,map05230 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Belongs to the pyruvate kinase family
BIBIDAFE_01486 1.57e-232 pfkA 2.7.1.11 - F ko:K00850 ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04152,ko05230,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04152,map05230 ko00000,ko00001,ko00002,ko01000,ko01009,ko03019 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
BIBIDAFE_01487 0.0 dnaE 2.7.7.7 - L ko:K02337 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase
BIBIDAFE_01488 9.47e-43 - - - S - - - Protein of unknown function (DUF2929)
BIBIDAFE_01489 0.0 yfkN 3.1.3.6, 3.1.4.16 - F ko:K01119 ko00230,ko00240,map00230,map00240 ko00000,ko00001,ko01000 Belongs to the 5'-nucleotidase family
BIBIDAFE_01490 3.62e-38 rpmF - - J ko:K02911 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011,ko03029 Belongs to the bacterial ribosomal protein bL32 family
BIBIDAFE_01491 6.62e-48 - - - S - - - Lipopolysaccharide assembly protein A domain
BIBIDAFE_01492 1.83e-187 - - - S ko:K07124 - ko00000 Belongs to the short-chain dehydrogenases reductases (SDR) family
BIBIDAFE_01493 1.05e-226 rnz 3.1.26.11 - J ko:K00784 ko03013,map03013 ko00000,ko00001,ko01000,ko03016 Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
BIBIDAFE_01494 0.0 oatA - - I - - - Acyltransferase
BIBIDAFE_01495 1.55e-308 obg - - S ko:K03979 - ko00000,ko01000,ko03009 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
BIBIDAFE_01496 0.0 uvrC - - L ko:K03703 ko03420,map03420 ko00000,ko00001,ko03400 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
BIBIDAFE_01497 2.68e-198 prsA 5.2.1.8 - M ko:K07533 - ko00000,ko01000,ko03110 Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
BIBIDAFE_01498 6.03e-57 - - - - - - - -
BIBIDAFE_01499 1.13e-102 hit - - FG ko:K02503 - ko00000,ko04147 Scavenger mRNA decapping enzyme C-term binding
BIBIDAFE_01500 6.86e-72 - - - K ko:K21498 - ko00000,ko02048 Helix-turn-helix XRE-family like proteins
BIBIDAFE_01501 3.67e-174 ecsA - - V ko:K01990 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
BIBIDAFE_01502 1.26e-269 ecsB - - U ko:K01992 - ko00000,ko00002,ko02000 ABC transporter
BIBIDAFE_01503 7.82e-161 trmB 2.1.1.33 - J ko:K03439 - ko00000,ko01000,ko03016 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
BIBIDAFE_01504 1.64e-72 ytpP - - CO - - - Thioredoxin
BIBIDAFE_01505 3.06e-157 XK27_10290 - - J ko:K06878 - ko00000 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
BIBIDAFE_01506 0.0 - - - S - - - SLAP domain
BIBIDAFE_01507 9.51e-317 murC 6.3.2.8 - M ko:K01924 ko00471,ko00550,ko01100,map00471,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Belongs to the MurCDEF family
BIBIDAFE_01508 1.32e-222 - - - S - - - SLAP domain
BIBIDAFE_01509 0.0 - - - M - - - Peptidase family M1 domain
BIBIDAFE_01510 4.58e-248 - - - S - - - Bacteriocin helveticin-J
BIBIDAFE_01511 6.96e-86 - - - L ko:K07491 - ko00000 Transposase IS200 like
BIBIDAFE_01512 3.74e-220 - - - L ko:K07496 - ko00000 transposase, IS605 OrfB family
BIBIDAFE_01513 3.77e-68 - - - L ko:K07473 - ko00000,ko02048 RelB antitoxin
BIBIDAFE_01514 9.24e-191 hflC - - O ko:K04087 - ko00000,ko00002,ko01000 prohibitin homologues
BIBIDAFE_01515 0.0 fhs 6.3.4.3 - F ko:K01938 ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Belongs to the formate--tetrahydrofolate ligase family
BIBIDAFE_01516 1.43e-106 purE 5.4.99.18 - F ko:K01588 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
BIBIDAFE_01517 4.17e-280 purK 6.3.4.18 - F ko:K01589 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
BIBIDAFE_01518 1.76e-172 purC 6.3.2.6 - F ko:K01923 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Belongs to the SAICAR synthetase family
BIBIDAFE_01519 4.44e-51 purS 6.3.5.3 - F ko:K01952 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
BIBIDAFE_01520 3.3e-165 purQ 6.3.5.3 - F ko:K01952 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
BIBIDAFE_01521 0.0 purL 6.3.5.3 - F ko:K01952 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
BIBIDAFE_01522 0.0 purF 2.4.2.14 - F ko:K00764 ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000,ko01002 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
BIBIDAFE_01523 1.38e-250 purM 6.3.3.1 - F ko:K01933 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Phosphoribosylformylglycinamidine cyclo-ligase
BIBIDAFE_01524 1.78e-134 purN 2.1.2.2 - F ko:K11175 ko00230,ko00670,ko01100,ko01110,ko01130,map00230,map00670,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
BIBIDAFE_01525 0.0 purH 2.1.2.3, 3.5.4.10 - F ko:K00602 ko00230,ko00670,ko01100,ko01110,ko01130,ko01523,map00230,map00670,map01100,map01110,map01130,map01523 ko00000,ko00001,ko00002,ko01000,ko04147 Bifunctional purine biosynthesis protein PurH
BIBIDAFE_01526 4.7e-300 purD 6.3.4.13 - F ko:K01945 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Belongs to the GARS family
BIBIDAFE_01528 9.61e-53 - - - - - - - -
BIBIDAFE_01529 3.69e-187 sufC - - O ko:K09013 - ko00000,ko02000 FeS assembly ATPase SufC
BIBIDAFE_01530 1.21e-305 sufD - - O ko:K07033,ko:K09015 - ko00000 FeS assembly protein SufD
BIBIDAFE_01531 2.23e-299 sufS 2.8.1.7, 4.4.1.16 - E ko:K11717 ko00450,ko01100,map00450,map01100 ko00000,ko00001,ko01000 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
BIBIDAFE_01532 1.29e-105 nifU - - C ko:K04488 - ko00000 SUF system FeS assembly protein, NifU family
BIBIDAFE_01533 0.0 sufB - - O ko:K07033,ko:K09014 - ko00000 assembly protein SufB
BIBIDAFE_01534 7.49e-74 yitW - - S - - - Iron-sulfur cluster assembly protein
BIBIDAFE_01535 2.11e-82 - - - S - - - Enterocin A Immunity
BIBIDAFE_01536 1.58e-164 - - - K ko:K22103 - ko00000,ko03000 DeoR C terminal sensor domain
BIBIDAFE_01537 2.64e-95 - - - L - - - COG2826 Transposase and inactivated derivatives, IS30 family
BIBIDAFE_01538 7.34e-88 - - - K - - - DNA-binding transcription factor activity
BIBIDAFE_01539 0.0 prtB 3.4.21.96 - O ko:K01361 - ko00000,ko01000,ko01002,ko03110 Belongs to the peptidase S8 family
BIBIDAFE_01540 4.76e-174 prtB 3.4.21.96 - O ko:K01361 - ko00000,ko01000,ko01002,ko03110 Belongs to the peptidase S8 family
BIBIDAFE_01541 2.97e-143 pcp 3.4.19.3 - O ko:K01304 - ko00000,ko01000,ko01002 Removes 5-oxoproline from various penultimate amino acid residues except L-proline
BIBIDAFE_01542 4.62e-131 - - - G - - - Aldose 1-epimerase
BIBIDAFE_01543 1.44e-255 brpA - - K - - - Cell envelope-like function transcriptional attenuator common domain protein
BIBIDAFE_01544 5.52e-146 plsY1 2.3.1.15 - I ko:K08591 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko01004 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
BIBIDAFE_01545 0.0 XK27_08315 - - M - - - Sulfatase
BIBIDAFE_01546 0.0 - - - S - - - Fibronectin type III domain
BIBIDAFE_01547 2.56e-309 tyrS 6.1.1.1 - J ko:K01866 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
BIBIDAFE_01548 2.3e-71 - - - - - - - -
BIBIDAFE_01550 0.0 pepC1 3.4.22.40 - E ko:K01372 - ko00000,ko01000,ko01002 aminopeptidase
BIBIDAFE_01551 1.07e-158 ypgQ - - S ko:K06950 - ko00000 Metal dependent phosphohydrolases with conserved 'HD' motif.
BIBIDAFE_01552 0.0 oppA - - E ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter, substratebinding protein
BIBIDAFE_01553 9.41e-137 oppA - - E ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter, substratebinding protein
BIBIDAFE_01554 1.54e-135 - 3.4.21.89 - U ko:K03100 ko02024,ko03060,map02024,map03060 ko00000,ko00001,ko01000,ko01002 Peptidase S24-like
BIBIDAFE_01555 3.69e-180 - - - - - - - -
BIBIDAFE_01556 3.15e-231 - - - - - - - -
BIBIDAFE_01557 0.0 rsmF - - J - - - NOL1 NOP2 sun family protein
BIBIDAFE_01558 1.3e-240 fni 5.3.3.2 - C ko:K01823 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
BIBIDAFE_01559 4.69e-261 mvaK2 2.7.4.2 - I ko:K00938 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 phosphomevalonate kinase
BIBIDAFE_01560 1.06e-230 mvaD 4.1.1.33 - I ko:K01597 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 diphosphomevalonate decarboxylase
BIBIDAFE_01561 3.76e-215 mvk 2.7.1.36 - I ko:K00869 ko00900,ko01100,ko01110,ko01130,ko04146,map00900,map01100,map01110,map01130,map04146 ko00000,ko00001,ko00002,ko01000 GHMP kinases N terminal domain
BIBIDAFE_01562 0.0 rexB 3.6.4.12 - L ko:K16899 - ko00000,ko01000,ko03400 The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
BIBIDAFE_01563 0.0 addA 3.6.4.12 - L ko:K16898 - ko00000,ko01000,ko03400 ATP-dependent helicase nuclease subunit A
BIBIDAFE_01564 0.0 dinG 3.6.4.12 - L ko:K03722 - ko00000,ko01000,ko03400 helicase involved in DNA repair and perhaps also replication
BIBIDAFE_01565 6.04e-117 ypmB - - S - - - Protein conserved in bacteria
BIBIDAFE_01566 0.0 asnS 6.1.1.22 - J ko:K01893 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Asparaginyl-tRNA synthetase
BIBIDAFE_01567 1.39e-148 dnaD - - L ko:K02086 - ko00000 DnaD domain protein
BIBIDAFE_01568 5.96e-146 nth 4.2.99.18 - L ko:K10773 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
BIBIDAFE_01569 0.0 ponA 2.4.1.129, 3.4.16.4 GT51 M ko:K05366 ko00550,ko01100,ko01501,map00550,map01100,map01501 ko00000,ko00001,ko01000,ko01003,ko01011 penicillin-binding protein 1A
BIBIDAFE_01570 9.14e-152 recU - - L ko:K03700 - ko00000,ko03400 Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
BIBIDAFE_01571 9.69e-139 ypsA - - S - - - Belongs to the UPF0398 family
BIBIDAFE_01572 5.27e-91 gpsB - - D - - - Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
BIBIDAFE_01573 1.06e-280 ypsC - - L ko:K07444 - ko00000,ko01000 Belongs to the methyltransferase superfamily
BIBIDAFE_01574 5.39e-14 cpdA - - S - - - Calcineurin-like phosphoesterase
BIBIDAFE_01575 1.29e-108 cpdA - - S - - - Calcineurin-like phosphoesterase
BIBIDAFE_01576 1.77e-101 cpdA - - S - - - Calcineurin-like phosphoesterase
BIBIDAFE_01577 0.0 fhs 6.3.4.3 - F ko:K01938 ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Belongs to the formate--tetrahydrofolate ligase family
BIBIDAFE_01578 1.23e-20 fhs 6.3.4.3 - F ko:K01938 ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Belongs to the formate--tetrahydrofolate ligase family
BIBIDAFE_01579 7.77e-103 lspA 3.4.23.36 - MU ko:K03101 ko03060,map03060 ko00000,ko00001,ko01000,ko01002 This protein specifically catalyzes the removal of signal peptides from prolipoproteins
BIBIDAFE_01580 6.28e-219 rluD 5.4.99.23 - J ko:K06180 - ko00000,ko01000,ko03009 Responsible for synthesis of pseudouridine from uracil
BIBIDAFE_01581 5.87e-255 carA 6.3.5.5 - F ko:K01956 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Carbamoyl-phosphate synthetase glutamine chain
BIBIDAFE_01582 0.0 carB1 6.3.5.5 - F ko:K01955 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Carbamoyl-phosphate synthase
BIBIDAFE_01583 0.0 FbpA - - K - - - Fibronectin-binding protein
BIBIDAFE_01584 5.69e-86 - - - - - - - -
BIBIDAFE_01585 3.73e-206 - - - S - - - EDD domain protein, DegV family
BIBIDAFE_01586 5.71e-262 xerS - - L ko:K03733 - ko00000,ko03036 Belongs to the 'phage' integrase family
BIBIDAFE_01587 1.84e-95 - - - - - - - -
BIBIDAFE_01588 1.81e-102 flaR - - F - - - topology modulation protein
BIBIDAFE_01589 1.35e-140 XK27_00160 - - S - - - Domain of unknown function (DUF5052)
BIBIDAFE_01590 5.66e-72 - - - - - - - -
BIBIDAFE_01591 5.82e-35 - - - M ko:K07273 - ko00000 Glycosyl hydrolases family 25
BIBIDAFE_01592 2.85e-42 - - - M ko:K07273 - ko00000 Glycosyl hydrolases family 25
BIBIDAFE_01593 2.42e-59 - - - M ko:K07273 - ko00000 Glycosyl hydrolases family 25
BIBIDAFE_01594 1.15e-31 - - - M ko:K07273 - ko00000 Glycosyl hydrolases family 25
BIBIDAFE_01595 1.47e-57 - - - L - - - the current gene model (or a revised gene model) may contain a
BIBIDAFE_01599 3.89e-242 - 2.7.7.73, 2.7.7.80 - H ko:K03148,ko:K21029 ko00730,ko01100,ko04122,map00730,map01100,map04122 ko00000,ko00001,ko01000 Involved in molybdopterin and thiamine biosynthesis, family 2
BIBIDAFE_01601 0.0 - - - V ko:K06148 - ko00000,ko02000 ABC-type multidrug transport system, ATPase and permease components
BIBIDAFE_01602 0.0 - - - V ko:K06148 - ko00000,ko02000 ABC-type multidrug transport system, ATPase and permease components
BIBIDAFE_01603 5.62e-58 - - - L - - - Transposase
BIBIDAFE_01604 9.5e-304 - - - I - - - Protein of unknown function (DUF2974)
BIBIDAFE_01605 2.78e-158 - - - S ko:K07507 - ko00000,ko02000 MgtC family
BIBIDAFE_01607 4.91e-264 - 2.1.1.72 - L ko:K07316 - ko00000,ko01000,ko02048 PFAM DNA methylase N-4 N-6 domain protein
BIBIDAFE_01608 0.0 - 3.1.21.5 - L ko:K01156 - ko00000,ko01000,ko02048 Type III restriction enzyme, res subunit
BIBIDAFE_01609 2.11e-108 - - - K - - - Domain of unknown function (DUF1836)
BIBIDAFE_01610 5.06e-197 yitS - - S - - - EDD domain protein, DegV family
BIBIDAFE_01613 1.34e-193 citG 2.4.2.52 - H ko:K05966 ko02020,map02020 ko00000,ko00001,ko01000 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase
BIBIDAFE_01614 7.15e-73 - - - - - - - -
BIBIDAFE_01615 2.14e-179 glpF - - U ko:K02440 - ko00000,ko02000 Belongs to the MIP aquaporin (TC 1.A.8) family
BIBIDAFE_01616 2.48e-175 mgtC3 - - S ko:K07507 - ko00000,ko02000 MgtC family
BIBIDAFE_01617 3.87e-12 - - - C - - - FMN-dependent dehydrogenase
BIBIDAFE_01618 3.51e-30 bglH 3.2.1.86 GT1 G ko:K01223 ko00010,ko00500,map00010,map00500 ko00000,ko00001,ko01000 beta-glucosidase activity
BIBIDAFE_01619 8.09e-235 - - - S - - - AAA domain
BIBIDAFE_01620 2.41e-164 gpmA1 5.4.2.11 - G ko:K01834 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
BIBIDAFE_01621 1.16e-31 - - - - - - - -
BIBIDAFE_01622 2.52e-207 - - - P ko:K16264 - ko00000,ko02000 cation diffusion facilitator family transporter
BIBIDAFE_01623 6.64e-162 - - - G - - - Belongs to the phosphoglycerate mutase family
BIBIDAFE_01624 1.81e-172 - - - S ko:K07090 - ko00000 membrane transporter protein
BIBIDAFE_01625 2.01e-18 - 3.8.1.2 - S ko:K01560 ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120 ko00000,ko00001,ko01000 Haloacid dehalogenase-like hydrolase
BIBIDAFE_01626 1.32e-83 - 3.8.1.2 - S ko:K01560 ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120 ko00000,ko00001,ko01000 Haloacid dehalogenase-like hydrolase
BIBIDAFE_01627 3.63e-141 - 3.5.1.124 - S ko:K03152 - ko00000,ko01000,ko01002 DJ-1/PfpI family
BIBIDAFE_01628 2.01e-81 yhaH - - S - - - Protein of unknown function (DUF805)
BIBIDAFE_01629 2.3e-59 - - - K - - - Putative DNA-binding domain
BIBIDAFE_01630 0.0 yeeA - - V - - - Type II restriction enzyme, methylase subunits
BIBIDAFE_01632 6.97e-18 - - - - - - - -
BIBIDAFE_01633 7.39e-82 - - - D - - - COG1674 DNA segregation ATPase FtsK SpoIIIE and related proteins
BIBIDAFE_01635 3.85e-201 - - - EP - - - Plasmid replication protein
BIBIDAFE_01636 4.97e-36 - - - - - - - -
BIBIDAFE_01637 2.12e-252 - - - L - - - Phage integrase family
BIBIDAFE_01638 1.01e-87 rpsI - - J ko:K02996 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the universal ribosomal protein uS9 family
BIBIDAFE_01639 2.27e-103 rplM - - J ko:K02871 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
BIBIDAFE_01640 3.86e-193 truA 5.4.99.12 - J ko:K06173 - ko00000,ko01000,ko03016 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
BIBIDAFE_01641 4.28e-182 ecfT - - U ko:K16785 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
BIBIDAFE_01642 1.58e-194 ecfA2 - - P ko:K16787 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
BIBIDAFE_01643 1.19e-198 ecfA1 - - P ko:K16786 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
BIBIDAFE_01644 3.16e-80 rplQ - - J ko:K02879 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal protein L17
BIBIDAFE_01645 4.41e-219 rpoA 2.7.7.6 - K ko:K03040 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
BIBIDAFE_01646 3.82e-82 rpsK - - J ko:K02948 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
BIBIDAFE_01647 1.46e-73 rpsM - - J ko:K02952 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
BIBIDAFE_01648 3.15e-20 rpmJ - - J ko:K02919 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL36 family
BIBIDAFE_01649 3.13e-46 infA - - J ko:K02518 - ko00000,ko03012 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
BIBIDAFE_01650 2.61e-155 adk 2.7.4.3 - F ko:K00939 ko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000,ko04147 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
BIBIDAFE_01651 5.1e-301 secY - - U ko:K03076 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
BIBIDAFE_01652 1.73e-93 rplO - - J ko:K02876 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds to the 23S rRNA
BIBIDAFE_01653 2.22e-34 rpmD - - J ko:K02907 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal protein L30
BIBIDAFE_01654 2.63e-110 rpsE - - J ko:K02988 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
BIBIDAFE_01655 1.28e-73 rplR - - J ko:K02881 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
BIBIDAFE_01656 5.05e-121 rplF - - J ko:K02933 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
BIBIDAFE_01657 2.28e-89 rpsH - - J ko:K02994 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
BIBIDAFE_01658 1e-39 rpsN - - J ko:K02954 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
BIBIDAFE_01659 3.53e-123 rplE - - J ko:K02931 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
BIBIDAFE_01660 6.92e-45 rplX - - J ko:K02895 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
BIBIDAFE_01661 2.55e-79 rplN - - J ko:K02874 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
BIBIDAFE_01662 6.37e-55 rpsQ - - J ko:K02961 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
BIBIDAFE_01663 4.15e-34 rpmC - - J ko:K02904 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the universal ribosomal protein uL29 family
BIBIDAFE_01664 1.66e-100 rplP - - J ko:K02878 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
BIBIDAFE_01665 7.45e-158 rpsC - - J ko:K02982 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
BIBIDAFE_01666 9.07e-73 rplV - - J ko:K02890 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
BIBIDAFE_01667 4.33e-62 rpsS - - J ko:K02965 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
BIBIDAFE_01668 5.7e-198 rplB - - J ko:K02886 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
BIBIDAFE_01669 4.67e-63 rplW - - J ko:K02892 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
BIBIDAFE_01670 3.85e-137 rplD - - J ko:K02926 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms part of the polypeptide exit tunnel
BIBIDAFE_01671 3.29e-146 rplC - - J ko:K02906 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
BIBIDAFE_01672 6.34e-66 rpsJ - - J ko:K02946 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Involved in the binding of tRNA to the ribosomes
BIBIDAFE_01673 0.0 fusA - - J ko:K02355 - ko00000,ko03012,ko03029 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
BIBIDAFE_01674 1.39e-106 rpsG - - J ko:K02992 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
BIBIDAFE_01675 7.28e-92 rpsL - - J ko:K02950 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
BIBIDAFE_01676 4.15e-157 comC 3.4.23.43 - NOU ko:K02236 - ko00000,ko00002,ko01000,ko02044 Bacterial Peptidase A24 N-terminal domain
BIBIDAFE_01677 4.83e-270 - - - S - - - Uncharacterised protein family (UPF0236)
BIBIDAFE_01678 4.73e-73 mglC - - S ko:K02057 - ko00000,ko00002,ko02000 Belongs to the binding-protein-dependent transport system permease family
BIBIDAFE_01679 5.95e-36 yufQ - - S ko:K02057 - ko00000,ko00002,ko02000 Belongs to the binding-protein-dependent transport system permease family
BIBIDAFE_01680 9.79e-144 yufQ - - S ko:K02057 - ko00000,ko00002,ko02000 Belongs to the binding-protein-dependent transport system permease family
BIBIDAFE_01681 0.0 yoaB 3.6.3.8 - P ko:K01537 - ko00000,ko01000 P-type ATPase
BIBIDAFE_01682 5.16e-218 fba 4.1.2.13, 4.1.2.29 - G ko:K01624,ko:K03339 ko00010,ko00030,ko00051,ko00562,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00562,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Fructose-1,6-bisphosphate aldolase, class II
BIBIDAFE_01683 4.18e-118 - - - L - - - NUDIX domain
BIBIDAFE_01684 7.71e-52 - - - - - - - -
BIBIDAFE_01685 1.66e-42 - - - - - - - -
BIBIDAFE_01686 0.0 - - - V ko:K06148 - ko00000,ko02000 ABC-type multidrug transport system, ATPase and permease components
BIBIDAFE_01687 0.0 - - - V ko:K06148 - ko00000,ko02000 ABC-type multidrug transport system, ATPase and permease components
BIBIDAFE_01689 7.34e-22 XK27_01125 - - L ko:K07484 - ko00000 PFAM IS66 Orf2 family protein
BIBIDAFE_01691 4.85e-20 - - - S - - - Phage derived protein Gp49-like (DUF891)
BIBIDAFE_01692 6.48e-215 phnD - - P ko:K02044 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter, phosphonate, periplasmic substrate-binding protein
BIBIDAFE_01693 0.0 dnaB 3.6.4.12 - L ko:K02314 ko03030,ko04112,map03030,map04112 ko00000,ko00001,ko01000,ko03032 Participates in initiation and elongation during chromosome replication
BIBIDAFE_01694 4.9e-100 rplI - - J ko:K02939 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds to the 23S rRNA
BIBIDAFE_01695 0.0 yybT - - T - - - signaling protein consisting of a modified GGDEF domain and a DHH domain
BIBIDAFE_01696 1.54e-84 - - - S - - - SLAP domain
BIBIDAFE_01697 7.98e-199 - - - EGP - - - Transmembrane secretion effector
BIBIDAFE_01698 2.53e-134 tnpR1 - - L - - - Resolvase, N terminal domain
BIBIDAFE_01700 1e-288 pbuG - - S ko:K06901 - ko00000,ko02000 permease
BIBIDAFE_01701 4.12e-47 - - - - - - - -
BIBIDAFE_01702 4.97e-102 atkY - - K ko:K02171 ko01501,map01501 ko00000,ko00001,ko00002,ko01504,ko03000 Penicillinase repressor
BIBIDAFE_01703 2.08e-84 - - - S - - - Cupredoxin-like domain
BIBIDAFE_01704 1.81e-64 - - - S - - - Cupredoxin-like domain
BIBIDAFE_01705 0.0 copA 3.6.3.3, 3.6.3.4, 3.6.3.5, 3.6.3.54 - P ko:K01533,ko:K01534,ko:K17686 ko01524,ko04016,map01524,map04016 ko00000,ko00001,ko01000 P-type ATPase
BIBIDAFE_01706 2.61e-45 - - - EGP ko:K08368 - ko00000,ko02000 Sugar (and other) transporter
BIBIDAFE_01707 5.97e-156 - - - EGP ko:K08368 - ko00000,ko02000 Sugar (and other) transporter
BIBIDAFE_01708 6.46e-27 - - - - - - - -
BIBIDAFE_01709 2.46e-271 - - - - - - - -
BIBIDAFE_01710 0.0 eriC - - P ko:K03281 - ko00000 chloride
BIBIDAFE_01711 0.0 gnd 1.1.1.343, 1.1.1.44 - H ko:K00033 ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
BIBIDAFE_01712 0.0 gidA - - D ko:K03495 - ko00000,ko03016,ko03036 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
BIBIDAFE_01713 0.0 mnmE - - S ko:K03650 - ko00000,ko01000,ko03016 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
BIBIDAFE_01714 3.37e-192 yidC - - U ko:K03217 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044,ko03029 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
BIBIDAFE_01715 1.31e-81 rnpA 3.1.26.5 - J ko:K03536 - ko00000,ko01000,ko03016 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
BIBIDAFE_01716 3.26e-23 rpmH - - J ko:K02914 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL34 family
BIBIDAFE_01717 0.0 dnaA - - L ko:K02313 ko02020,ko04112,map02020,map04112 ko00000,ko00001,ko03032,ko03036 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
BIBIDAFE_01718 4.3e-256 dnaN 2.7.7.7 - L ko:K02338 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
BIBIDAFE_01719 2.87e-47 yaaA - - S ko:K14761 - ko00000,ko03009 S4 domain protein YaaA
BIBIDAFE_01720 1.47e-267 recF - - L ko:K03629 ko03440,map03440 ko00000,ko00001,ko03400 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
BIBIDAFE_01721 0.0 gyrB 5.99.1.3 - L ko:K02470 - ko00000,ko01000,ko03032,ko03400 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
BIBIDAFE_01722 0.0 gyrA 5.99.1.3 - L ko:K02469 - ko00000,ko01000,ko03032,ko03400 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
BIBIDAFE_01723 0.0 mycA 4.2.1.53 - S ko:K10254 - ko00000,ko01000 Myosin-crossreactive antigen
BIBIDAFE_01724 1.48e-151 - - - S - - - SNARE associated Golgi protein
BIBIDAFE_01725 7.43e-258 pgl 3.1.1.31 - G ko:K07404 ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Lactonase, 7-bladed beta-propeller
BIBIDAFE_01726 0.0 pacL - - P - - - Cation transporter/ATPase, N-terminus
BIBIDAFE_01727 1.64e-35 srlB 2.7.1.198 - G ko:K02781 ko00051,ko02060,map00051,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system glucitol/sorbitol-specific IIA component
BIBIDAFE_01728 2.77e-31 srlB 2.7.1.198 - G ko:K02781 ko00051,ko02060,map00051,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system glucitol/sorbitol-specific IIA component
BIBIDAFE_01729 8.55e-270 XK27_05220 - - S - - - AI-2E family transporter
BIBIDAFE_01730 2.12e-136 cspR 2.1.1.207 - J ko:K03216 - ko00000,ko01000,ko03016 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
BIBIDAFE_01731 4.46e-90 WQ51_03320 - - S - - - Protein of unknown function (DUF1149)
BIBIDAFE_01732 0.0 ftsK - - D ko:K03466 - ko00000,ko03036 Belongs to the FtsK SpoIIIE SftA family
BIBIDAFE_01733 8.89e-290 ymfF - - S - - - Peptidase M16 inactive domain protein
BIBIDAFE_01734 1.11e-302 ymfH - - S - - - Peptidase M16
BIBIDAFE_01735 1.39e-171 fabG 1.1.1.100 - IQ ko:K00059 ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 Enoyl-(Acyl carrier protein) reductase
BIBIDAFE_01736 1.95e-191 ymfM - - S ko:K15539 - ko00000 Helix-turn-helix domain
BIBIDAFE_01737 4.26e-127 pgsA 2.7.8.5 - I ko:K00995 ko00564,ko01100,map00564,map01100 ko00000,ko00001,ko01000 Belongs to the CDP-alcohol phosphatidyltransferase class-I family
BIBIDAFE_01738 1.08e-248 recA - - L ko:K03553 ko03440,map03440 ko00000,ko00001,ko00002,ko03400 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
BIBIDAFE_01739 1.01e-291 rny - - S ko:K18682 ko03018,map03018 ko00000,ko00001,ko01000,ko03019 Endoribonuclease that initiates mRNA decay
BIBIDAFE_01740 5.32e-266 tagO 2.7.8.33, 2.7.8.35 - M ko:K02851 - ko00000,ko01000,ko01003,ko01005 transferase
BIBIDAFE_01741 2.92e-153 yvyE 3.4.13.9 - S ko:K01271 - ko00000,ko01000,ko01002 YigZ family
BIBIDAFE_01742 2.58e-313 comFA - - L ko:K02240 - ko00000,ko00002,ko02044 Helicase C-terminal domain protein
BIBIDAFE_01743 7.21e-173 comFC - - S ko:K02242 - ko00000,ko00002,ko02044 Competence protein
BIBIDAFE_01744 6.59e-124 hpf - - J ko:K05808 - ko00000,ko03009 Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
BIBIDAFE_01745 0.0 secA - - U ko:K03070 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
BIBIDAFE_01746 4.35e-238 prfB - - J ko:K02836 - ko00000,ko03012 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
BIBIDAFE_01747 5.88e-44 - - - - - - - -
BIBIDAFE_01748 3.54e-230 hprK - - F ko:K06023 - ko00000,ko01000 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
BIBIDAFE_01749 2e-203 lgt - - M ko:K13292 - ko00000,ko01000 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
BIBIDAFE_01751 2.04e-148 aroE 1.1.1.25 - E ko:K00014 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
BIBIDAFE_01752 2.18e-27 aroE 1.1.1.25 - E ko:K00014 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
BIBIDAFE_01753 9.72e-247 - - - G - - - Major Facilitator Superfamily
BIBIDAFE_01754 1.38e-176 aroD 4.2.1.10 - E ko:K03785 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis-dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3- dehydroshikimate
BIBIDAFE_01755 0.0 fhs 6.3.4.3 - F ko:K01938 ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Belongs to the formate--tetrahydrofolate ligase family
BIBIDAFE_01756 4.1e-111 purE 5.4.99.18 - F ko:K01588 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
BIBIDAFE_01757 5.89e-280 purK 6.3.4.18 - F ko:K01589 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
BIBIDAFE_01758 2.92e-171 purC 6.3.2.6 - F ko:K01923 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Belongs to the SAICAR synthetase family
BIBIDAFE_01759 1.01e-51 purS 6.3.5.3 - F ko:K01952 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
BIBIDAFE_01760 4.51e-163 purQ 6.3.5.3 - F ko:K01952 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
BIBIDAFE_01761 0.0 purL 6.3.5.3 - F ko:K01952 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
BIBIDAFE_01762 0.0 purF 2.4.2.14 - F ko:K00764 ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000,ko01002 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
BIBIDAFE_01763 4.12e-254 purM 6.3.3.1 - F ko:K01933 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Phosphoribosylformylglycinamidine cyclo-ligase
BIBIDAFE_01764 0.0 purH 2.1.2.3, 3.5.4.10 - F ko:K00602 ko00230,ko00670,ko01100,ko01110,ko01130,ko01523,map00230,map00670,map01100,map01110,map01130,map01523 ko00000,ko00001,ko00002,ko01000,ko04147 Bifunctional purine biosynthesis protein PurH
BIBIDAFE_01765 2.66e-310 purD 6.3.4.13 - F ko:K01945 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Belongs to the GARS family
BIBIDAFE_01766 7.59e-268 guaB 1.1.1.205 - F ko:K00088 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko04147 Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
BIBIDAFE_01767 1.56e-190 oppB - - P ko:K15581 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC-type dipeptide oligopeptide nickel transport systems, permease components
BIBIDAFE_01768 6.43e-239 oppC - - EP ko:K15582 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC-type dipeptide oligopeptide nickel transport systems, permease components
BIBIDAFE_01769 2.69e-256 oppD - - P ko:K02031,ko:K15583 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 Belongs to the ABC transporter superfamily
BIBIDAFE_01770 1.32e-221 oppF - - P ko:K10823 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 Belongs to the ABC transporter superfamily
BIBIDAFE_01771 0.0 pepE 3.4.22.40 - E ko:K01372 - ko00000,ko01000,ko01002 aminopeptidase
BIBIDAFE_01772 8.64e-79 hsp - - O ko:K13993 ko04141,map04141 ko00000,ko00001,ko03110 Belongs to the small heat shock protein (HSP20) family
BIBIDAFE_01773 2.25e-100 greA - - K ko:K03624 - ko00000,ko03021 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
BIBIDAFE_01774 6.33e-148 - - - - - - - -
BIBIDAFE_01776 1.08e-149 - - - E - - - Belongs to the SOS response-associated peptidase family
BIBIDAFE_01777 2.86e-245 trpS 6.1.1.2 - J ko:K01867 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the class-I aminoacyl-tRNA synthetase family
BIBIDAFE_01778 1.09e-118 comEB 3.5.4.12 - F ko:K01493 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000,ko02044 MafB19-like deaminase
BIBIDAFE_01779 4.56e-138 - - - S ko:K06872 - ko00000 TPM domain
BIBIDAFE_01780 0.0 mgtA 3.6.3.2 - P ko:K01531 - ko00000,ko01000 COG0474 Cation transport ATPase
BIBIDAFE_01781 0.0 metG 6.1.1.10 - J ko:K01874 ko00450,ko00970,map00450,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BIBIDAFE_01782 6.67e-190 tatD - - L ko:K03424 - ko00000,ko01000 hydrolase, TatD family
BIBIDAFE_01783 3.64e-129 rnmV 3.1.26.8 - J ko:K05985 - ko00000,ko01000 Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
BIBIDAFE_01784 8.47e-208 ksgA 2.1.1.182 - J ko:K02528 - ko00000,ko01000,ko03009 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
BIBIDAFE_01785 1.71e-50 veg - - S - - - Biofilm formation stimulator VEG
BIBIDAFE_01786 4.49e-194 purR - - F ko:K09685 - ko00000,ko03000 pur operon repressor
BIBIDAFE_01787 0.0 glmU 2.3.1.157, 2.7.7.23 - M ko:K04042 ko00520,ko01100,ko01130,map00520,map01100,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
BIBIDAFE_01788 3.98e-116 - - - S - - - SLAP domain
BIBIDAFE_01789 6.86e-98 - - - S - - - SLAP domain
BIBIDAFE_01790 2.36e-86 - - - C - - - Glycerophosphoryl diester phosphodiesterase family
BIBIDAFE_01791 1.2e-87 - - - S - - - GtrA-like protein
BIBIDAFE_01792 8.88e-217 yfdH - GT2 M ko:K12999,ko:K20534 - ko00000,ko01000,ko01003,ko01005,ko02000 Glycosyltransferase like family 2
BIBIDAFE_01793 6.57e-310 - - - L ko:K07496 - ko00000 transposase, IS605 OrfB family
BIBIDAFE_01794 3.47e-46 - - - - ko:K19167 - ko00000,ko02048 -
BIBIDAFE_01795 2.9e-105 - 3.1.21.5 - L ko:K01156 - ko00000,ko01000,ko02048 Type III restriction enzyme, res subunit
BIBIDAFE_01796 2.41e-218 - - - L - - - COG3547 Transposase and inactivated derivatives
BIBIDAFE_01797 3.76e-23 - - - - - - - -
BIBIDAFE_01798 3.72e-12 - - - - - - - -
BIBIDAFE_01799 1.35e-164 - - - L - - - PFAM transposase, IS4 family protein
BIBIDAFE_01800 1.48e-179 - - - L - - - Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
BIBIDAFE_01801 0.0 fruA 2.7.1.202 - GT ko:K02768,ko:K02769,ko:K02770 ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 Phosphotransferase System
BIBIDAFE_01802 2.66e-57 - - - K ko:K21903 - ko00000,ko03000 helix_turn_helix, Arsenical Resistance Operon Repressor
BIBIDAFE_01803 2.67e-204 - - - P ko:K02077 - ko00000,ko00002,ko02000 Belongs to the bacterial solute-binding protein 9 family
BIBIDAFE_01804 9.85e-154 adcC - - P ko:K02074,ko:K09817,ko:K11710 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ABC transporter
BIBIDAFE_01805 5.54e-173 znuB - - U ko:K02075,ko:K09816 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC 3 transport family
BIBIDAFE_01806 9.23e-305 tcyP - - U ko:K06956 - ko00000 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
BIBIDAFE_01808 1.7e-86 - - - K - - - helix_turn_helix, arabinose operon control protein
BIBIDAFE_01809 6.98e-43 melA 3.2.1.22 - G ko:K07407 ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603 ko00000,ko00001,ko01000 alpha-galactosidase
BIBIDAFE_01810 2.96e-242 manL 2.7.1.191 - G ko:K02793,ko:K02794 ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system sorbose subfamily IIB component
BIBIDAFE_01811 5.16e-181 manY - - G ko:K02746,ko:K02795 ko00051,ko00052,ko00520,ko01100,ko02060,map00051,map00052,map00520,map01100,map02060 ko00000,ko00001,ko00002,ko02000 PTS system
BIBIDAFE_01812 7.39e-224 manN - - G ko:K02796 ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060 ko00000,ko00001,ko00002,ko02000 system, mannose fructose sorbose family IID component
BIBIDAFE_01813 2.76e-83 - - - S - - - Domain of unknown function (DUF956)
BIBIDAFE_01814 3.03e-192 - - - K - - - Transcriptional regulator
BIBIDAFE_01815 6.26e-14 - 2.3.1.79 - S ko:K00661 - ko00000,ko01000 transferase hexapeptide repeat
BIBIDAFE_01816 4.8e-80 - 2.3.1.79 - S ko:K00661 - ko00000,ko01000 transferase hexapeptide repeat
BIBIDAFE_01817 2.91e-311 cycA - - E ko:K03293,ko:K11737 - ko00000,ko02000 Amino acid permease
BIBIDAFE_01818 5.64e-150 adhE 1.1.1.1, 1.2.1.10 - C ko:K04072 ko00010,ko00071,ko00350,ko00620,ko00625,ko00626,ko00650,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00620,map00625,map00626,map00650,map01100,map01110,map01120,map01130,map01220 ko00000,ko00001,ko01000 belongs to the iron- containing alcohol dehydrogenase family
BIBIDAFE_01819 0.0 adhE 1.1.1.1, 1.2.1.10 - C ko:K04072 ko00010,ko00071,ko00350,ko00620,ko00625,ko00626,ko00650,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00620,map00625,map00626,map00650,map01100,map01110,map01120,map01130,map01220 ko00000,ko00001,ko01000 belongs to the iron- containing alcohol dehydrogenase family
BIBIDAFE_01820 0.0 glmS 2.6.1.16 - M ko:K00820 ko00250,ko00520,ko01100,ko01130,ko04931,map00250,map00520,map01100,map01130,map04931 ko00000,ko00001,ko01000,ko01002 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
BIBIDAFE_01821 7.04e-63 - - - - - - - -
BIBIDAFE_01822 3.81e-59 - - - E - - - amino acid
BIBIDAFE_01823 2.17e-64 - - - - - - - -
BIBIDAFE_01824 2.51e-115 - - - M - - - LPXTG-motif cell wall anchor domain protein
BIBIDAFE_01825 5.47e-46 - - - S - - - LPXTG cell wall anchor motif
BIBIDAFE_01826 2.81e-06 deoC 4.1.2.4 - F ko:K01619 ko00030,map00030 ko00000,ko00001,ko01000 Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
BIBIDAFE_01827 5.21e-255 tsaD 2.3.1.234 - J ko:K01409 - ko00000,ko01000,ko03016 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
BIBIDAFE_01828 7.94e-134 rimI 2.3.1.128 - K ko:K03789 - ko00000,ko01000,ko03009 Ribosomal-protein-alanine acetyltransferase
BIBIDAFE_01829 3.97e-172 yeaZ 2.3.1.234 - O ko:K01409,ko:K14742 - ko00000,ko01000,ko03016 Universal bacterial protein YeaZ
BIBIDAFE_01830 1.83e-112 - - - S - - - ECF transporter, substrate-specific component
BIBIDAFE_01831 9.84e-182 fat 3.1.2.21 - I ko:K01071 ko00061,ko01100,map00061,map01100 ko00000,ko00001,ko01000,ko01004 Acyl-ACP thioesterase
BIBIDAFE_01832 8.11e-201 rsmI 2.1.1.198 - H ko:K07056 - ko00000,ko01000,ko03009 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
BIBIDAFE_01833 1.99e-80 yabA - - L - - - Involved in initiation control of chromosome replication
BIBIDAFE_01834 4.16e-199 holB 2.7.7.7 - L ko:K02341 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase III
BIBIDAFE_01835 1.52e-68 yaaQ - - S - - - Cyclic-di-AMP receptor
BIBIDAFE_01836 8.42e-149 tmk 2.7.4.9 - F ko:K00943 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
BIBIDAFE_01837 9.54e-47 - - - S - - - Protein of unknown function (DUF2508)
BIBIDAFE_01838 2.64e-141 recR - - L ko:K06187 ko03440,map03440 ko00000,ko00001,ko03400 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
BIBIDAFE_01839 6.03e-57 yaaK - - S ko:K09747 - ko00000 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
BIBIDAFE_01840 0.0 dnaX 2.7.7.7 - L ko:K02343 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
BIBIDAFE_01841 9.21e-120 tadA 3.5.4.33 - F ko:K11991 - ko00000,ko01000,ko03016 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
BIBIDAFE_01842 6.69e-149 rsmC 2.1.1.172 - J ko:K00564 - ko00000,ko01000,ko03009 Methyltransferase
BIBIDAFE_01843 3.75e-112 - 2.1.1.172 - J ko:K00564,ko:K10716 - ko00000,ko01000,ko02000,ko03009 Ion channel
BIBIDAFE_01844 1.61e-72 rplL - - J ko:K02935 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
BIBIDAFE_01845 3.72e-111 rplJ - - J ko:K02864 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
BIBIDAFE_01846 6.04e-201 ywkB - - S ko:K07088 - ko00000 Membrane transport protein
BIBIDAFE_01847 1.88e-34 ywkB - - S ko:K07088 - ko00000 Membrane transport protein
BIBIDAFE_01848 1.43e-151 phoU - - P ko:K02039 - ko00000 Plays a role in the regulation of phosphate uptake
BIBIDAFE_01849 1.33e-178 pstB1 3.6.3.27 - P ko:K02036 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
BIBIDAFE_01850 1.5e-186 pstB2 3.6.3.27 - P ko:K02036 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
BIBIDAFE_01851 9.02e-199 pstA - - P ko:K02038 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Phosphate transport system permease protein PstA
BIBIDAFE_01852 4.93e-221 pstC - - P ko:K02037 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 probably responsible for the translocation of the substrate across the membrane
BIBIDAFE_01853 6.67e-202 pstS - - P ko:K02040 ko02010,ko02020,ko05152,map02010,map02020,map05152 ko00000,ko00001,ko00002,ko02000 Phosphate
BIBIDAFE_01854 4.23e-46 - - - L - - - An automated process has identified a potential problem with this gene model
BIBIDAFE_01855 2.11e-250 ampC - - V - - - Beta-lactamase
BIBIDAFE_01858 2.19e-84 - - - - - - - -
BIBIDAFE_01860 0.0 - - - S ko:K06919 - ko00000 Virulence-associated protein E
BIBIDAFE_01862 3.35e-56 - - - - - - - -
BIBIDAFE_01863 3.24e-40 - - - - - - - -
BIBIDAFE_01865 1.36e-105 - - - K - - - Transcriptional
BIBIDAFE_01866 9.91e-287 - - - L - - - Belongs to the 'phage' integrase family
BIBIDAFE_01867 0.0 murE2 6.3.2.13 - M ko:K01928 ko00300,ko00550,map00300,map00550 ko00000,ko00001,ko01000,ko01011 Domain of unknown function (DUF1727)
BIBIDAFE_01868 1.21e-146 tdk 2.7.1.21 - F ko:K00857 ko00240,ko00983,ko01100,map00240,map00983,map01100 ko00000,ko00001,ko01000 thymidine kinase
BIBIDAFE_01869 5.18e-234 prfA - - J ko:K02835 - ko00000,ko03012 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
BIBIDAFE_01870 1.25e-202 prmC 2.1.1.297 - J ko:K02493 - ko00000,ko01000,ko03012 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
BIBIDAFE_01871 5.32e-242 ywlC 2.7.7.87 - J ko:K07566 - ko00000,ko01000,ko03009,ko03016 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
BIBIDAFE_01872 1.3e-146 upp 2.4.2.9 - F ko:K00761 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko01000 Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
BIBIDAFE_01873 2.91e-166 atpB - - C ko:K02108 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194,ko03110 it plays a direct role in the translocation of protons across the membrane
BIBIDAFE_01874 2.16e-39 atpE - - C ko:K02110 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
BIBIDAFE_01875 1.14e-84 atpF - - C ko:K02109 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
BIBIDAFE_01876 4.8e-122 atpH - - C ko:K02113 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
BIBIDAFE_01877 0.0 atpA 3.6.3.14 - C ko:K02111 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194,ko01000 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
BIBIDAFE_01878 6.03e-221 atpG - - C ko:K02115 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
BIBIDAFE_01879 0.0 atpD 3.6.3.14 - C ko:K02112 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194,ko01000 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
BIBIDAFE_01880 2.98e-94 atpC - - C ko:K02114 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 Produces ATP from ADP in the presence of a proton gradient across the membrane
BIBIDAFE_01881 4.22e-41 - - - S - - - Protein of unknown function (DUF1146)
BIBIDAFE_01882 7.12e-229 mbl - - D ko:K03569 - ko00000,ko02048,ko03036,ko04812 Cell shape determining protein MreB Mrl
BIBIDAFE_01883 1.31e-67 ytjA - - S ko:K08998 - ko00000 Could be involved in insertion of integral membrane proteins into the membrane
BIBIDAFE_01884 8.85e-47 - - - S - - - Protein of unknown function (DUF2969)
BIBIDAFE_01885 8.71e-278 rodA - - D ko:K05837 - ko00000,ko03036 Belongs to the SEDS family
BIBIDAFE_01886 1.34e-103 uspA - - T - - - universal stress protein
BIBIDAFE_01887 4.53e-55 - - - - - - - -
BIBIDAFE_01888 6.82e-309 rarA - - L ko:K07478 - ko00000 recombination factor protein RarA
BIBIDAFE_01889 1.83e-106 - - - S - - - Protein of unknown function (DUF1694)
BIBIDAFE_01890 8.8e-142 rpsD - - J ko:K02986 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
BIBIDAFE_01891 0.0 ezrA - - D ko:K06286 - ko00000,ko03036 modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
BIBIDAFE_01892 7.44e-278 iscS2 2.8.1.7 - E ko:K04487 ko00730,ko01100,ko04122,map00730,map01100,map04122 ko00000,ko00001,ko01000,ko02048,ko03016,ko03029 Aminotransferase class V
BIBIDAFE_01893 1.13e-293 thiI 2.8.1.4 - H ko:K03151 ko00730,ko01100,ko04122,map00730,map01100,map04122 ko00000,ko00001,ko01000,ko03016 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
BIBIDAFE_01894 3.77e-180 - - - K - - - Helix-turn-helix domain
BIBIDAFE_01895 4.46e-165 rsuA 5.4.99.19 - J ko:K06183 - ko00000,ko01000,ko03009 Belongs to the pseudouridine synthase RsuA family
BIBIDAFE_01896 8.44e-21 - - - K - - - Helix-turn-helix domain
BIBIDAFE_01897 1.33e-84 - - - - - - - -
BIBIDAFE_01898 4.51e-124 - - - - - - - -
BIBIDAFE_01899 4.7e-120 - - - - - - - -
BIBIDAFE_01900 0.0 thrS 6.1.1.3 - J ko:K01868 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
BIBIDAFE_01901 1.03e-212 dnaI - - L ko:K11144 - ko00000,ko03032 Primosomal protein DnaI
BIBIDAFE_01902 0.0 dnaB2 - - L ko:K03346 - ko00000,ko03032 Replication initiation and membrane attachment
BIBIDAFE_01903 1.83e-106 nrdR - - K ko:K07738 - ko00000,ko03000 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
BIBIDAFE_01904 1.07e-136 coaE 2.7.1.24 - F ko:K00859 ko00770,ko01100,map00770,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
BIBIDAFE_01905 6.45e-203 fpg 3.2.2.23, 4.2.99.18 - L ko:K10563 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
BIBIDAFE_01906 0.0 polA 2.7.7.7 - L ko:K02335 ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440 ko00000,ko00001,ko01000,ko03032,ko03400 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
BIBIDAFE_01907 1.4e-12 - - - - - - - -
BIBIDAFE_01910 1.77e-45 - - - - - - - -
BIBIDAFE_01911 1.27e-07 - - - S - - - Hypothetical protein (DUF2513)
BIBIDAFE_01912 1.61e-67 yeeA - - V - - - Type II restriction enzyme, methylase subunits
BIBIDAFE_01914 2.62e-61 tnpA1 - - L - - - PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
BIBIDAFE_01915 2.52e-81 - - - S - - - Protein of unknown function (DUF2974)
BIBIDAFE_01916 1.27e-141 glnP - - P ko:K10040 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter permease
BIBIDAFE_01917 3.14e-140 glnM - - P ko:K10040 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter permease
BIBIDAFE_01918 5.69e-195 glnH - - ET ko:K10039 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter substrate-binding protein
BIBIDAFE_01919 2.39e-174 glnQ - - E ko:K10041 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ABC transporter, ATP-binding protein
BIBIDAFE_01920 1.1e-36 rimL - - J ko:K03817 - ko00000,ko01000,ko03009 Acetyltransferase (GNAT) domain
BIBIDAFE_01921 7.75e-72 rimL - - J ko:K03817 - ko00000,ko01000,ko03009 Acetyltransferase (GNAT) domain
BIBIDAFE_01922 9.54e-74 - - - - - - - -
BIBIDAFE_01923 0.0 - - - S - - - ABC transporter
BIBIDAFE_01924 5.87e-180 - - - S - - - Putative threonine/serine exporter
BIBIDAFE_01925 8.95e-110 - - - S - - - Threonine/Serine exporter, ThrE
BIBIDAFE_01926 6.42e-158 - - - S - - - Peptidase_C39 like family
BIBIDAFE_01927 1.91e-218 potE - - E - - - Amino Acid
BIBIDAFE_01928 1.33e-114 luxS 4.4.1.21 - H ko:K07173 ko00270,ko01100,ko01230,ko02024,ko02026,ko05111,map00270,map01100,map01230,map02024,map02026,map05111 ko00000,ko00001,ko00002,ko01000 Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
BIBIDAFE_01929 8.03e-41 metE 2.1.1.14 - E ko:K00549 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 methionine synthase, vitamin-B12 independent
BIBIDAFE_01930 5.73e-11 metE 2.1.1.14 - E ko:K00549 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 methionine synthase, vitamin-B12 independent
BIBIDAFE_01932 7.28e-117 - - - - - - - -
BIBIDAFE_01934 0.0 guaA 6.3.5.2 - F ko:K01951 ko00230,ko00983,ko01100,map00230,map00983,map01100 ko00000,ko00001,ko00002,ko01000,ko01002 Catalyzes the synthesis of GMP from XMP
BIBIDAFE_01937 7.23e-93 def2 3.5.1.88 - J ko:K01462 - ko00000,ko01000 Removes the formyl group from the N-terminal Met of newly synthesized proteins
BIBIDAFE_01938 5.59e-250 pbpX1 - - V - - - Beta-lactamase
BIBIDAFE_01939 0.0 - - - L - - - Helicase C-terminal domain protein
BIBIDAFE_01940 2.05e-182 - - - E ko:K20265 ko02024,map02024 ko00000,ko00001,ko02000 amino acid
BIBIDAFE_01941 1.25e-204 xth 3.1.11.2 - L ko:K01142 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 exodeoxyribonuclease III
BIBIDAFE_01942 1.37e-215 - - - G - - - Phosphotransferase enzyme family
BIBIDAFE_01943 1.02e-244 ldhA 1.1.1.28 - C ko:K03778,ko:K18347 ko00620,ko01120,ko01502,ko02020,map00620,map01120,map01502,map02020 ko00000,ko00001,ko00002,ko01000,ko01504 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BIBIDAFE_01944 2.33e-55 - 3.1.3.102, 3.1.3.104 - S ko:K20861 ko00740,ko01100,ko01110,map00740,map01100,map01110 ko00000,ko00001,ko00002,ko01000 haloacid dehalogenase-like hydrolase
BIBIDAFE_01945 5.95e-115 - 3.1.3.102, 3.1.3.104 - S ko:K20861 ko00740,ko01100,ko01110,map00740,map01100,map01110 ko00000,ko00001,ko00002,ko01000 haloacid dehalogenase-like hydrolase
BIBIDAFE_01946 2.49e-165 fusA1 - - J - - - elongation factor G
BIBIDAFE_01947 1.4e-278 fusA1 - - J - - - elongation factor G
BIBIDAFE_01948 1.48e-211 yvgN - - C - - - Aldo keto reductase
BIBIDAFE_01949 1.23e-74 - - - S - - - SLAP domain
BIBIDAFE_01950 1.04e-119 - - - S - - - SLAP domain
BIBIDAFE_01951 3.05e-176 ysaA 3.1.3.5, 3.8.1.2 - S ko:K01560,ko:K07025,ko:K08723 ko00230,ko00240,ko00361,ko00625,ko00760,ko01100,ko01110,ko01120,map00230,map00240,map00361,map00625,map00760,map01100,map01110,map01120 ko00000,ko00001,ko01000 Haloacid dehalogenase-like hydrolase
BIBIDAFE_01952 2.57e-227 ABC-SBP - - S ko:K01989 - ko00000,ko00002,ko02000 ABC transporter
BIBIDAFE_01953 2.75e-165 XK27_08840 - - U ko:K05832 - ko00000,ko00002,ko02000 Belongs to the binding-protein-dependent transport system permease family
BIBIDAFE_01954 4.47e-178 XK27_08845 - - S ko:K05833 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
BIBIDAFE_01955 6.91e-55 - - - - - - - -
BIBIDAFE_01956 1.73e-24 - - - - - - - -
BIBIDAFE_01957 1.67e-135 - - - E - - - GDSL-like Lipase/Acylhydrolase
BIBIDAFE_01958 3.61e-225 ydbI - - K - - - AI-2E family transporter
BIBIDAFE_01959 0.0 rtpR 1.17.4.2 - F ko:K00527 ko00230,ko00240,ko01100,map00230,map00240,map01100 ko00000,ko00001,ko00002,ko01000 ribonucleoside-triphosphate reductase activity
BIBIDAFE_01960 8.81e-89 - - - S - - - Domain of unknown function (DUF4430)
BIBIDAFE_01961 1.56e-114 - - - S ko:K16927 - ko00000,ko00002,ko02000 ECF transporter, substrate-specific component
BIBIDAFE_01962 1.09e-129 - - - S - - - Cob(I)alamin adenosyltransferase
BIBIDAFE_01963 3.13e-171 yvdE - - K - - - helix_turn _helix lactose operon repressor
BIBIDAFE_01964 3.02e-54 - - - L ko:K07483,ko:K07497 - ko00000 Helix-turn-helix domain
BIBIDAFE_01965 7.93e-289 oxlT - - P ko:K08177 - ko00000,ko02000 Major Facilitator Superfamily
BIBIDAFE_01967 0.0 hsdM 2.1.1.72 - V ko:K03427 - ko00000,ko01000,ko02048 type I restriction-modification system
BIBIDAFE_01968 7.85e-120 - 3.1.21.3 - V ko:K01154 - ko00000,ko01000,ko02048 Type I restriction modification DNA specificity domain
BIBIDAFE_01970 6.3e-169 mrr2 - - L ko:K07448 - ko00000,ko02048 restriction endonuclease
BIBIDAFE_01972 9e-276 - - - S - - - SLAP domain
BIBIDAFE_01973 5.76e-18 - - - S - - - YSIRK type signal peptide
BIBIDAFE_01974 7.78e-79 - - - M - - - LPXTG-motif cell wall anchor domain protein
BIBIDAFE_01976 8.09e-197 nadE 6.3.1.5 - F ko:K01916 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
BIBIDAFE_01977 0.0 pncB 6.3.4.21 - F ko:K00763 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko01000 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
BIBIDAFE_01978 3.59e-264 - - - M - - - Glycosyl transferases group 1
BIBIDAFE_01979 2.05e-173 tagA 2.4.1.187 GT26 F ko:K05946 ko05111,map05111 ko00000,ko00001,ko01000,ko01003 Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
BIBIDAFE_01980 1.57e-171 gpmA 5.4.2.11 - G ko:K01834 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
BIBIDAFE_01981 4.6e-170 - - - - - - - -
BIBIDAFE_01982 2.14e-152 - - - - - - - -
BIBIDAFE_01983 1.14e-230 - - - S - - - Oxidoreductase family, NAD-binding Rossmann fold
BIBIDAFE_01984 1.5e-149 - - - K - - - Protein of unknown function (DUF4065)
BIBIDAFE_01985 0.0 yjbQ - - P ko:K03455,ko:K03499 - ko00000,ko02000 TrkA C-terminal domain protein
BIBIDAFE_01986 3.73e-264 - 3.2.1.96, 3.5.1.28 GH73 M ko:K01227,ko:K01447,ko:K13714,ko:K13731 ko00511,ko05100,map00511,map05100 ko00000,ko00001,ko01000 N-acetylmuramoyl-L-alanine amidase
BIBIDAFE_01987 3.43e-264 - - - NU - - - Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
BIBIDAFE_01988 6.87e-49 - - - - - - - -
BIBIDAFE_01990 2.01e-237 - - - S - - - SLAP domain
BIBIDAFE_01991 2.05e-47 - - - S - - - Protein of unknown function (DUF2922)
BIBIDAFE_01992 7.02e-40 - - - - - - - -
BIBIDAFE_01993 2.45e-08 - - - - - - - -
BIBIDAFE_01995 1.63e-112 - - - - - - - -
BIBIDAFE_01996 0.0 kup - - P ko:K03549 - ko00000,ko02000 Transport of potassium into the cell
BIBIDAFE_01997 1.32e-60 yeeA - - V - - - Type II restriction enzyme, methylase subunits
BIBIDAFE_01998 7.38e-124 yeeA - - V - - - Type II restriction enzyme, methylase subunits
BIBIDAFE_01999 3e-105 yeeA - - V - - - Type II restriction enzyme, methylase subunits
BIBIDAFE_02000 1.57e-25 - - - - - - - -
BIBIDAFE_02002 1.23e-65 hsdS 3.1.21.3 - V ko:K01154 - ko00000,ko01000,ko02048 Type I restriction modification DNA specificity domain
BIBIDAFE_02003 0.0 hsdM 2.1.1.72 - V ko:K03427 - ko00000,ko01000,ko02048 type I restriction-modification system
BIBIDAFE_02004 2.92e-269 hsdR 3.1.21.3 - L ko:K01153 - ko00000,ko01000,ko02048 Type I restriction enzyme R protein N terminus (HSDR_N)
BIBIDAFE_02005 1.28e-267 hsdR 3.1.21.3 - L ko:K01153 - ko00000,ko01000,ko02048 Type I restriction enzyme R protein N terminus (HSDR_N)
BIBIDAFE_02006 1.26e-181 - 2.1.1.72 - L ko:K03427 - ko00000,ko01000,ko02048 N-6 DNA Methylase
BIBIDAFE_02007 5.21e-178 spoU - - J ko:K03437 - ko00000,ko03016 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
BIBIDAFE_02008 1.13e-58 acyP 3.6.1.7 - C ko:K01512 ko00620,ko00627,ko01120,map00620,map00627,map01120 ko00000,ko00001,ko01000 Belongs to the acylphosphatase family
BIBIDAFE_02009 8.22e-203 yidC - - U ko:K03217 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044,ko03029 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
BIBIDAFE_02010 1.67e-110 - - - S ko:K19055 - ko00000,ko01000,ko03016 Aminoacyl-tRNA editing domain
BIBIDAFE_02011 0.0 arlS 2.7.13.3 - T ko:K18940 ko02020,map02020 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Histidine kinase
BIBIDAFE_02012 2.12e-164 csrR - - K - - - response regulator
BIBIDAFE_02013 5.19e-127 ylbN - - S ko:K07040 - ko00000 Uncharacterized ACR, COG1399
BIBIDAFE_02014 1.89e-274 ylbM - - S - - - Belongs to the UPF0348 family
BIBIDAFE_02015 3.58e-78 rsfS - - J ko:K09710 - ko00000,ko03009 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
BIBIDAFE_02016 9.6e-143 yqeK - - H - - - Hydrolase, HD family
BIBIDAFE_02017 4.02e-159 nadD 2.7.7.18 - H ko:K00969 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
BIBIDAFE_02018 1.22e-272 yqeH - - S ko:K06948 - ko00000,ko03009 Ribosome biogenesis GTPase YqeH
BIBIDAFE_02019 1.51e-121 yqeG - - S ko:K07015 - ko00000 HAD phosphatase, family IIIA
BIBIDAFE_02020 1.23e-75 rplT - - J ko:K02887 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
BIBIDAFE_02021 4.77e-38 rpmI - - J ko:K02916 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL35 family
BIBIDAFE_02022 1.44e-74 infC - - J ko:K02520 - ko00000,ko03012,ko03029 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
BIBIDAFE_02023 7.84e-298 astA 2.8.2.22 - M ko:K01023 - ko00000,ko01000 Arylsulfotransferase Ig-like domain
BIBIDAFE_02024 1.84e-35 astA 2.8.2.22 - M ko:K01023 - ko00000,ko01000 Arylsulfotransferase Ig-like domain
BIBIDAFE_02025 1.85e-245 - - - S - - - Domain of unknown function (DUF389)
BIBIDAFE_02026 4.08e-62 - - - S ko:K09707 - ko00000 ACT domain
BIBIDAFE_02027 1.04e-125 - - - S ko:K06910 - ko00000 Phosphatidylethanolamine-binding protein
BIBIDAFE_02028 9.28e-317 - - - S - - - Putative threonine/serine exporter
BIBIDAFE_02029 1.62e-228 citR - - K - - - Putative sugar-binding domain
BIBIDAFE_02030 7.12e-69 - - - - - - - -
BIBIDAFE_02031 3.82e-23 - - - - - - - -
BIBIDAFE_02032 9.47e-86 - - - S - - - Domain of unknown function DUF1828
BIBIDAFE_02033 8.93e-124 - - - S ko:K16924 - ko00000,ko00002,ko02000 UPF0397 protein
BIBIDAFE_02034 0.0 ykoD - - P ko:K16786,ko:K16787 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ABC transporter, ATP-binding protein
BIBIDAFE_02035 1.89e-191 cbiQ - - P ko:K16785 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 cobalt transport
BIBIDAFE_02036 1.01e-24 - - - - - - - -
BIBIDAFE_02037 3.56e-93 ytwI - - S - - - Protein of unknown function (DUF441)
BIBIDAFE_02038 0.0 mgtA 3.6.3.2 - P ko:K01531 - ko00000,ko01000 COG0474 Cation transport ATPase
BIBIDAFE_02039 3.78e-34 - - - - - - - -
BIBIDAFE_02041 4.24e-185 - - - U ko:K05340 - ko00000,ko02000 sugar transport
BIBIDAFE_02042 4.7e-76 B4168_4126 - - L ko:K07493 - ko00000 Transposase
BIBIDAFE_02043 2.51e-256 yjcA - - S ko:K19350 ko02010,map02010 ko00000,ko00001,ko01504,ko02000 ABC transporter
BIBIDAFE_02044 1.89e-133 - - - S ko:K07038 - ko00000 LexA-binding, inner membrane-associated putative hydrolase
BIBIDAFE_02045 2.22e-30 - - - - - - - -
BIBIDAFE_02046 9.42e-122 hpt 2.4.2.8 - F ko:K00760 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 ko00000,ko00001,ko01000 Belongs to the purine pyrimidine phosphoribosyltransferase family
BIBIDAFE_02048 5.84e-134 - - - E - - - GDSL-like Lipase/Acylhydrolase
BIBIDAFE_02049 4.94e-103 yjcF - - S - - - Acetyltransferase (GNAT) domain
BIBIDAFE_02050 1.06e-192 aatB - - ET ko:K02030 - ko00000,ko00002,ko02000 ABC transporter substrate-binding protein
BIBIDAFE_02051 9.1e-141 glnQ 3.6.3.21 - E ko:K02028 - ko00000,ko00002,ko01000,ko02000 ABC transporter
BIBIDAFE_02052 3.65e-140 yecS_2 - - P ko:K02029,ko:K02030 - ko00000,ko00002,ko02000 ABC transporter permease
BIBIDAFE_02053 0.0 helD 3.6.4.12 - L ko:K03657 ko03420,ko03430,map03420,map03430 ko00000,ko00001,ko01000,ko03400 DNA helicase
BIBIDAFE_02054 8.78e-157 XK27_08875 - - O - - - PFAM peptidase M10A and M12B, matrixin and adamalysin
BIBIDAFE_02055 5.9e-43 tnpA1 - - L - - - PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
BIBIDAFE_02056 7.69e-44 tnpA1 - - L - - - PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
BIBIDAFE_02057 4.28e-226 pepI 3.4.11.5 - E ko:K01259 ko00330,map00330 ko00000,ko00001,ko01000,ko01002 Releases the N-terminal proline from various substrates
BIBIDAFE_02058 6.62e-128 - - - P ko:K16785 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Cobalt transport protein
BIBIDAFE_02059 0.0 - - - S ko:K16786,ko:K16787 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ABC transporter, ATP-binding protein
BIBIDAFE_02060 1.22e-221 - - - K - - - helix_turn_helix, arabinose operon control protein
BIBIDAFE_02061 1.77e-74 - - - L ko:K07497 - ko00000 hmm pf00665
BIBIDAFE_02062 1.25e-10 - - - L ko:K07497 - ko00000 hmm pf00665
BIBIDAFE_02063 5.46e-25 - - - L ko:K07497 - ko00000 hmm pf00665
BIBIDAFE_02064 1.99e-83 - - - L - - - Helix-turn-helix domain
BIBIDAFE_02065 3.86e-206 htpX - - O ko:K03799 - ko00000,ko00002,ko01000,ko01002 Belongs to the peptidase M48B family
BIBIDAFE_02066 1.43e-125 lemA - - S ko:K03744 - ko00000 LemA family
BIBIDAFE_02067 1.94e-248 ysdE - - P - - - Citrate transporter
BIBIDAFE_02068 1.36e-91 - - - S - - - Iron-sulphur cluster biosynthesis
BIBIDAFE_02069 2.98e-24 glpQ 3.1.4.46 - C ko:K01126 ko00564,map00564 ko00000,ko00001,ko01000 Membrane domain of glycerophosphoryl diester phosphodiesterase
BIBIDAFE_02070 9.69e-25 - - - - - - - -
BIBIDAFE_02071 4.3e-195 - - - - - - - -
BIBIDAFE_02072 1.34e-211 tnpA1 - - L - - - PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
BIBIDAFE_02073 5.66e-297 glyA 2.1.2.1 - E ko:K00600 ko00260,ko00460,ko00630,ko00670,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko01523,map00260,map00460,map00630,map00670,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map01523 ko00000,ko00001,ko00002,ko01000 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
BIBIDAFE_02074 6.23e-19 - - - - - - - -
BIBIDAFE_02075 6.68e-150 - - - L - - - Belongs to the 'phage' integrase family
BIBIDAFE_02076 9.06e-60 groS - - O ko:K04078 - ko00000,ko03029,ko03110 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
BIBIDAFE_02077 0.0 groL - - O ko:K04077 ko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152 ko00000,ko00001,ko03019,ko03029,ko03110,ko04147 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
BIBIDAFE_02078 0.0 mutS - - L ko:K03555 ko03430,map03430 ko00000,ko00001,ko03400 that it carries out the mismatch recognition step. This protein has a weak ATPase activity
BIBIDAFE_02079 0.0 mutL - - L ko:K03572 ko03430,map03430 ko00000,ko00001,ko03400 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
BIBIDAFE_02080 8.83e-134 ruvA 3.6.4.12 - L ko:K03550 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
BIBIDAFE_02081 5.3e-240 ruvB 3.6.4.12 - L ko:K03551 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
BIBIDAFE_02082 6.55e-82 yajC - - U ko:K03210 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Preprotein translocase
BIBIDAFE_02083 0.0 zwf 1.1.1.363, 1.1.1.49 - G ko:K00036 ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,ko05230,map00030,map00480,map01100,map01110,map01120,map01130,map01200,map05230 ko00000,ko00001,ko00002,ko01000,ko04147 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
BIBIDAFE_02084 2.47e-274 dinB 2.7.7.7 - L ko:K02346 - ko00000,ko01000,ko03400 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
BIBIDAFE_02085 1.63e-233 nrnA 3.1.13.3, 3.1.3.7 - S ko:K06881 ko00920,ko01100,ko01120,map00920,map01100,map01120 ko00000,ko00001,ko01000,ko03400 DHHA1 domain protein
BIBIDAFE_02086 9.18e-317 cshB 3.6.4.13 - JKL ko:K05592,ko:K18692 ko03018,map03018 ko00000,ko00001,ko01000,ko03009,ko03019 DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
BIBIDAFE_02087 0.0 alaS 6.1.1.7 - J ko:K01872 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
BIBIDAFE_02088 5.32e-57 yrzL - - S - - - Belongs to the UPF0297 family
BIBIDAFE_02089 6.59e-96 yrrK - - J ko:K07447 - ko00000,ko01000 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
BIBIDAFE_02090 1.18e-66 yrzB - - S - - - Belongs to the UPF0473 family
BIBIDAFE_02091 0.0 mutS2 - - L ko:K07456 ko03430,map03430 ko00000,ko00001,ko03400 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
BIBIDAFE_02092 1.08e-71 trxA - - O ko:K03671 ko04621,ko05418,map04621,map05418 ko00000,ko00001,ko03110 Belongs to the thioredoxin family

eggNOG-mapper v2.1.12 (Database: eggNOG v5.0.2, Mar. 2021 release)