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ORF_ID	e_value	Gene_name	EC_number	CAZy	COGs	KEGG_ko	KEGG_Pathway	BRITE	Description
PLIICNAG_00001	1.13e-114	-	-	-	S	-	-	-	Bacterial membrane protein, YfhO
PLIICNAG_00002	2.35e-126	-	-	-	-	ko:K19167	-	ko00000,ko02048	-
PLIICNAG_00003	0.0	valS	6.1.1.9	-	J	ko:K01873	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
PLIICNAG_00004	8.83e-303	folC	6.3.2.12, 6.3.2.17	-	H	ko:K11754	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the folylpolyglutamate synthase family
PLIICNAG_00005	4.33e-162	-	-	-	S	-	-	-	Haloacid dehalogenase-like hydrolase
PLIICNAG_00006	3.32e-148	radC	-	-	L	ko:K03630	-	ko00000	DNA repair protein
PLIICNAG_00007	1.01e-226	mreB	-	-	D	ko:K03569	-	ko00000,ko02048,ko03036,ko04812	cell shape determining protein MreB
PLIICNAG_00008	7.09e-190	mreC	-	-	M	ko:K03570	-	ko00000,ko03036	Involved in formation and maintenance of cell shape
PLIICNAG_00009	8.04e-124	mreD	-	-	-	ko:K03571	-	ko00000,ko03036	-
PLIICNAG_00010	1.09e-18	-	-	-	S	-	-	-	Protein of unknown function (DUF4044)
PLIICNAG_00011	4.46e-72	-	-	-	S	-	-	-	Protein of unknown function (DUF3397)
PLIICNAG_00012	3.81e-100	mraZ	-	-	K	ko:K03925	-	ko00000	Belongs to the MraZ family
PLIICNAG_00013	3.29e-234	rsmH	2.1.1.199	-	J	ko:K03438	-	ko00000,ko01000,ko03009	Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
PLIICNAG_00014	2.2e-70	ftsL	-	-	D	-	-	-	Cell division protein FtsL
PLIICNAG_00015	0.0	pbpX	-	-	M	ko:K08724,ko:K12552,ko:K12556	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01011	Penicillin-binding Protein
PLIICNAG_00016	1.55e-224	mraY	2.7.8.13	-	M	ko:K01000	ko00550,ko01100,ko01502,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
PLIICNAG_00017	0.0	murD	6.3.2.9	-	M	ko:K01925	ko00471,ko00550,ko01100,map00471,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
PLIICNAG_00018	7e-267	murG	2.4.1.227	GT28	M	ko:K02563	ko00550,ko01100,ko01502,ko04112,map00550,map01100,map01502,map04112	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
PLIICNAG_00019	2.83e-181	divIB	-	-	D	ko:K03589	ko04112,map04112	ko00000,ko00001,ko03036	Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
PLIICNAG_00020	4.95e-305	ftsA	-	-	D	ko:K03590	ko04112,map04112	ko00000,ko00001,ko03036,ko04812	Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
PLIICNAG_00021	1.93e-262	ftsZ	-	-	D	ko:K03531	ko04112,map04112	ko00000,ko00001,ko02048,ko03036,ko04812	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
PLIICNAG_00022	1.26e-95	sepF	-	-	D	ko:K09772	-	ko00000,ko03036	Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
PLIICNAG_00023	5.07e-62	yggT	-	-	S	ko:K02221	-	ko00000,ko02044	YGGT family
PLIICNAG_00024	1.1e-189	ylmH	-	-	S	-	-	-	S4 domain protein
PLIICNAG_00025	3.52e-150	divIVA	-	-	D	ko:K04074	-	ko00000,ko03036	DivIVA domain protein
PLIICNAG_00026	0.0	ileS	6.1.1.5	-	J	ko:K01870	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
PLIICNAG_00027	1.15e-43	cspA	-	-	K	ko:K03704	-	ko00000,ko03000	'Cold-shock' DNA-binding domain
PLIICNAG_00028	6.29e-135	nudF	3.6.1.13	-	L	ko:K01515	ko00230,map00230	ko00000,ko00001,ko01000	ADP-ribose pyrophosphatase
PLIICNAG_00029	1.28e-56	-	-	-	-	-	-	-	-
PLIICNAG_00030	1.69e-162	mtnN	3.2.2.9	-	E	ko:K01243	ko00270,ko01100,ko01230,map00270,map01100,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
PLIICNAG_00031	1.33e-275	iscS	2.8.1.7	-	E	ko:K04487	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko02048,ko03016,ko03029	Aminotransferase class V
PLIICNAG_00032	4.07e-74	XK27_04120	-	-	S	-	-	-	Putative amino acid metabolism
PLIICNAG_00033	1.56e-278	mnmA	2.8.1.13	-	J	ko:K00566	ko04122,map04122	ko00000,ko00001,ko01000,ko03016	Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
PLIICNAG_00034	3.18e-161	pgm	-	-	G	-	-	-	Phosphoglycerate mutase family
PLIICNAG_00035	1.24e-126	-	-	-	S	-	-	-	repeat protein
PLIICNAG_00036	0.0	recD2	3.1.11.5	-	L	ko:K03581	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
PLIICNAG_00037	4.59e-135	ytlR	-	-	I	-	-	-	Diacylglycerol kinase catalytic domain
PLIICNAG_00038	7.34e-35	ytlR	-	-	I	-	-	-	Diacylglycerol kinase catalytic domain
PLIICNAG_00039	0.0	rnjA	-	-	J	ko:K12574	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PLIICNAG_00040	9e-46	ykzG	-	-	S	-	-	-	Belongs to the UPF0356 family
PLIICNAG_00041	5.41e-129	def	3.5.1.88	-	J	ko:K01462	-	ko00000,ko01000	Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
PLIICNAG_00042	0.0	typA	-	-	T	ko:K06207	-	ko00000	GTP-binding protein TypA
PLIICNAG_00043	2.72e-263	ftsW	-	-	D	ko:K03588	ko04112,map04112	ko00000,ko00001,ko02000,ko03036	Belongs to the SEDS family
PLIICNAG_00044	1.72e-71	ylbG	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2129)
PLIICNAG_00045	2.04e-123	rsmD	2.1.1.171	-	L	ko:K08316	-	ko00000,ko01000,ko03009	RNA methyltransferase, RsmD family
PLIICNAG_00046	6.77e-111	coaD	2.7.7.3	-	H	ko:K00954	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
PLIICNAG_00047	7.89e-245	lon	-	-	T	ko:K07177	ko02024,map02024	ko00000,ko00001,ko01002	Belongs to the peptidase S16 family
PLIICNAG_00048	1.63e-128	comEA	-	-	L	ko:K02237	-	ko00000,ko00002,ko02044	Competence protein ComEA
PLIICNAG_00049	0.0	comEC	-	-	S	ko:K02238	-	ko00000,ko00002,ko02044	Competence protein ComEC
PLIICNAG_00050	2.46e-224	holA	2.7.7.7	-	L	ko:K02340	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III delta subunit
PLIICNAG_00051	4.42e-47	rpsT	-	-	J	ko:K02968	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 16S ribosomal RNA
PLIICNAG_00052	1.48e-57	rpsO	-	-	J	ko:K02956	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
PLIICNAG_00053	0.0	rnjB	-	-	J	ko:K12574	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PLIICNAG_00054	3.27e-192	-	-	-	-	-	-	-	-
PLIICNAG_00055	5.52e-285	tuf	-	-	J	ko:K02358,ko:K15771	ko02010,map02010	ko00000,ko00001,ko00002,ko02000,ko03012,ko03029,ko04147	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
PLIICNAG_00056	5.53e-276	tig	-	-	D	ko:K03545	-	ko00000	Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
PLIICNAG_00057	1.1e-296	clpX	-	-	O	ko:K03544	ko04112,map04112	ko00000,ko00001,ko03110	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
PLIICNAG_00058	1.07e-134	engB	-	-	D	ko:K03978	-	ko00000,ko03036	Necessary for normal cell division and for the maintenance of normal septation
PLIICNAG_00059	0.0	potE	-	-	E	-	-	-	Amino Acid
PLIICNAG_00060	2.34e-241	dapF	5.1.1.7	-	E	ko:K01778	ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
PLIICNAG_00061	0.0	lysC	2.7.2.4	-	E	ko:K00928	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the aspartokinase family
PLIICNAG_00062	3.8e-316	lysA	4.1.1.20	-	E	ko:K01586	ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
PLIICNAG_00063	2.94e-108	dapH	2.3.1.117, 2.3.1.89	-	E	ko:K00674,ko:K05822	ko00300,ko01100,ko01110,ko01120,ko01230,map00300,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
PLIICNAG_00064	1.15e-280	hipO	3.5.1.47	-	E	ko:K05823	ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000,ko01002	Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
PLIICNAG_00065	2.2e-223	dapA	4.3.3.7	-	E	ko:K01714	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
PLIICNAG_00066	2.69e-182	dapB	1.17.1.8	-	E	ko:K00215	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
PLIICNAG_00067	1.74e-271	aspC	-	-	E	ko:K00841	ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase
PLIICNAG_00068	7.1e-252	asd	1.2.1.11	-	E	ko:K00133	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
PLIICNAG_00069	4.04e-265	pbpX1	-	-	V	-	-	-	Beta-lactamase
PLIICNAG_00070	4e-140	yjhB	3.6.1.13	-	F	ko:K01515	ko00230,map00230	ko00000,ko00001,ko01000	NUDIX domain
PLIICNAG_00071	0.0	-	-	-	I	-	-	-	Protein of unknown function (DUF2974)
PLIICNAG_00072	8.69e-49	-	-	-	C	-	-	-	FMN_bind
PLIICNAG_00073	2.56e-14	-	-	-	-	-	-	-	-
PLIICNAG_00074	9.99e-72	-	-	-	-	-	-	-	-
PLIICNAG_00075	3.12e-222	iunH	3.2.2.1	-	F	ko:K01239	ko00230,ko00760,ko01100,map00230,map00760,map01100	ko00000,ko00001,ko01000	inosine-uridine preferring nucleoside hydrolase
PLIICNAG_00076	1.08e-216	ydhF	-	-	S	-	-	-	Aldo keto reductase
PLIICNAG_00077	7.64e-305	pbg4	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
PLIICNAG_00078	3.1e-158	-	-	-	K	ko:K03492	-	ko00000,ko03000	UTRA
PLIICNAG_00079	2.39e-204	polYB	2.7.7.7	-	L	ko:K02346,ko:K03502	-	ko00000,ko01000,ko03400	Belongs to the DNA polymerase type-Y family
PLIICNAG_00080	6.03e-247	add	3.5.4.2, 3.5.4.4	-	F	ko:K01488,ko:K21053	ko00230,ko01100,ko05340,map00230,map01100,map05340	ko00000,ko00001,ko01000	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
PLIICNAG_00081	1.02e-298	pbuG	-	-	S	ko:K06901	-	ko00000,ko02000	permease
PLIICNAG_00082	0.0	ade	3.5.4.2	-	F	ko:K01486	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
PLIICNAG_00083	1.21e-53	-	-	-	S	-	-	-	PAS domain
PLIICNAG_00084	1.13e-172	nirC	-	-	P	ko:K02598	-	ko00000,ko02000	Formate/nitrite transporter
PLIICNAG_00085	1.08e-181	glcD	1.1.3.15	-	C	ko:K00104	ko00630,ko01100,ko01110,ko01120,ko01130,map00630,map01100,map01110,map01120,map01130	ko00000,ko00001,ko01000	FAD linked oxidases, C-terminal domain
PLIICNAG_00086	8.72e-66	glcD	1.1.3.15	-	C	ko:K00104	ko00630,ko01100,ko01110,ko01120,ko01130,map00630,map01100,map01110,map01120,map01130	ko00000,ko00001,ko01000	FAD linked oxidases, C-terminal domain
PLIICNAG_00087	1.97e-140	pncA	-	-	Q	-	-	-	Isochorismatase family
PLIICNAG_00088	0.0	nadC2	6.3.4.21	-	F	ko:K00763	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
PLIICNAG_00089	1.05e-162	-	-	-	F	-	-	-	NUDIX domain
PLIICNAG_00091	1.37e-94	-	-	-	S	-	-	-	Iron-sulphur cluster biosynthesis
PLIICNAG_00092	0.0	citF	2.8.3.10	-	H	ko:K01643	ko02020,map02020	ko00000,ko00001,ko01000	Citrate (pro-3S)-lyase alpha chain
PLIICNAG_00093	2.18e-215	citE	4.1.3.34	-	G	ko:K01644	ko02020,map02020	ko00000,ko00001,ko01000	Belongs to the HpcH HpaI aldolase family
PLIICNAG_00094	2.27e-59	citD	-	-	C	ko:K01646	ko02020,map02020	ko00000,ko00001	Covalent carrier of the coenzyme of citrate lyase
PLIICNAG_00095	3.93e-248	citC	6.2.1.22	-	H	ko:K01910	ko02020,map02020	ko00000,ko00001,ko01000	Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
PLIICNAG_00096	4.19e-197	-	-	-	I	-	-	-	Alpha/beta hydrolase family
PLIICNAG_00097	0.0	citP	-	-	P	ko:K03319	-	ko00000	Sodium:sulfate symporter transmembrane region
PLIICNAG_00098	0.0	pepC4	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	Peptidase C1-like family
PLIICNAG_00099	2.11e-86	-	-	-	-	-	-	-	-
PLIICNAG_00100	5.49e-53	-	-	-	-	-	-	-	-
PLIICNAG_00101	8.63e-82	-	-	-	M	-	-	-	Rib/alpha-like repeat
PLIICNAG_00102	4.93e-214	ldh	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	Belongs to the LDH MDH superfamily. LDH family
PLIICNAG_00105	0.0	frdA	1.3.5.4	-	C	ko:K00244	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	ko00000,ko00001,ko00002,ko01000	FAD binding domain
PLIICNAG_00106	0.0	fumC	4.2.1.2	-	C	ko:K01679	ko00020,ko00620,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko04934,ko05200,ko05211,map00020,map00620,map00720,map01100,map01110,map01120,map01130,map01200,map04934,map05200,map05211	ko00000,ko00001,ko00002,ko01000	Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
PLIICNAG_00107	4.08e-47	-	-	-	-	-	-	-	-
PLIICNAG_00108	3.27e-239	-	-	-	S	ko:K07133	-	ko00000	cog cog1373
PLIICNAG_00109	2.82e-130	metI	-	-	P	ko:K02072	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
PLIICNAG_00110	1.46e-240	metN	-	-	P	ko:K02071	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
PLIICNAG_00111	3.21e-208	metQ	-	-	P	ko:K02073	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the nlpA lipoprotein family
PLIICNAG_00112	0.0	aha1	-	-	P	ko:K12952	-	ko00000,ko01000	E1-E2 ATPase
PLIICNAG_00113	7.3e-22	ps301	-	-	K	-	-	-	sequence-specific DNA binding
PLIICNAG_00114	1.35e-123	folA	1.5.1.3	-	H	ko:K00287	ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523	ko00000,ko00001,ko00002,ko01000	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
PLIICNAG_00115	6.71e-242	thyA	2.1.1.45	-	F	ko:K00560	ko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523	ko00000,ko00001,ko00002,ko01000	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
PLIICNAG_00116	5.93e-314	yifK	-	-	E	ko:K03293	-	ko00000	Amino acid permease
PLIICNAG_00117	1e-75	-	-	-	S	-	-	-	PFAM Uncharacterised protein family UPF0150
PLIICNAG_00119	1.4e-155	cbh	3.5.1.24	-	M	ko:K01442	ko00120,ko00121,ko01100,map00120,map00121,map01100	ko00000,ko00001,ko01000	Linear amide C-N hydrolase, choloylglycine hydrolase family protein
PLIICNAG_00120	2.68e-40	cbh	3.5.1.24	-	M	ko:K01442	ko00120,ko00121,ko01100,map00120,map00121,map01100	ko00000,ko00001,ko01000	Linear amide C-N hydrolase, choloylglycine hydrolase family protein
PLIICNAG_00121	1.08e-127	-	-	-	I	-	-	-	PAP2 superfamily
PLIICNAG_00122	6.8e-169	-	-	-	S	-	-	-	Uncharacterised protein, DegV family COG1307
PLIICNAG_00123	2.03e-310	eno	4.2.1.11	-	G	ko:K01689	ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066	ko00000,ko00001,ko00002,ko01000,ko03019,ko04147	Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
PLIICNAG_00124	4.43e-98	-	-	-	S	-	-	-	Domain of unknown function (DUF4767)
PLIICNAG_00125	2.03e-111	yfhC	-	-	C	-	-	-	nitroreductase
PLIICNAG_00126	5.95e-14	ypbG	2.7.1.2	-	GK	ko:K00845	ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	ROK family
PLIICNAG_00127	1.08e-102	ypbG	2.7.1.2	-	GK	ko:K00845	ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	ROK family
PLIICNAG_00128	0.0	pbg6	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
PLIICNAG_00129	5.77e-133	pts23C	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PLIICNAG_00130	3.21e-103	pts23C	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PLIICNAG_00131	3.55e-173	-	-	-	K	ko:K03492	-	ko00000,ko03000	UTRA
PLIICNAG_00132	1.89e-157	-	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
PLIICNAG_00133	6.26e-58	metF	1.5.1.20	-	C	ko:K00297	ko00670,ko00720,ko01100,ko01120,ko01200,ko01523,map00670,map00720,map01100,map01120,map01200,map01523	ko00000,ko00001,ko00002,ko01000	Methylenetetrahydrofolate reductase
PLIICNAG_00134	0.0	metE	2.1.1.14	-	E	ko:K00549	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
PLIICNAG_00135	2.49e-114	luxS	4.4.1.21	-	H	ko:K07173	ko00270,ko01100,ko01230,ko02024,ko02026,ko05111,map00270,map01100,map01230,map02024,map02026,map05111	ko00000,ko00001,ko00002,ko01000	Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
PLIICNAG_00136	3.99e-74	-	-	-	L	-	-	-	Integrase
PLIICNAG_00137	3.13e-309	slpX	-	-	S	-	-	-	SLAP domain
PLIICNAG_00138	3.86e-261	-	-	-	S	-	-	-	Bacteriocin helveticin-J
PLIICNAG_00139	7.77e-34	-	-	-	K	-	-	-	Helix-turn-helix domain
PLIICNAG_00140	2.06e-157	comC	3.4.23.43	-	NOU	ko:K02236	-	ko00000,ko00002,ko01000,ko02044	Bacterial Peptidase A24 N-terminal domain
PLIICNAG_00141	7.28e-92	rpsL	-	-	J	ko:K02950	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
PLIICNAG_00142	8.05e-106	rpsG	-	-	J	ko:K02992	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
PLIICNAG_00143	0.0	fusA	-	-	J	ko:K02355	-	ko00000,ko03012,ko03029	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
PLIICNAG_00144	0.0	helD	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	DNA helicase
PLIICNAG_00145	6.36e-161	XK27_08875	-	-	O	-	-	-	PFAM peptidase M10A and M12B, matrixin and adamalysin
PLIICNAG_00146	1.78e-161	gpm2	-	-	G	-	-	-	Phosphoglycerate mutase family
PLIICNAG_00147	1.6e-118	glgD	2.7.7.27	-	G	ko:K00975	ko00500,ko00520,ko01100,ko01110,ko02026,map00500,map00520,map01100,map01110,map02026	ko00000,ko00001,ko00002,ko01000	Nucleotidyl transferase
PLIICNAG_00148	5.78e-268	glgC	2.7.7.27	-	H	ko:K00975	ko00500,ko00520,ko01100,ko01110,ko02026,map00500,map00520,map01100,map01110,map02026	ko00000,ko00001,ko00002,ko01000	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
PLIICNAG_00149	0.0	glgB	2.4.1.18	CBM48,GH13	G	ko:K00700	ko00500,ko01100,ko01110,map00500,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
PLIICNAG_00150	1.9e-15	-	-	-	S	-	-	-	CsbD-like
PLIICNAG_00151	5.32e-35	-	-	-	S	-	-	-	Transglycosylase associated protein
PLIICNAG_00152	1.64e-304	-	-	-	I	-	-	-	Protein of unknown function (DUF2974)
PLIICNAG_00153	2.98e-153	-	-	-	S	ko:K07507	-	ko00000,ko02000	MgtC family
PLIICNAG_00155	3.59e-17	-	-	-	S	-	-	-	Adenine-specific methyltransferase EcoRI
PLIICNAG_00158	1.41e-137	-	-	-	S	-	-	-	Domain of unknown function (DUF4767)
PLIICNAG_00159	9.13e-153	-	-	-	S	-	-	-	Membrane
PLIICNAG_00160	1.7e-55	polYB	2.7.7.7	-	L	ko:K02346,ko:K03502	-	ko00000,ko01000,ko03400	Belongs to the DNA polymerase type-Y family
PLIICNAG_00161	2.04e-95	-	-	-	T	ko:K07171	-	ko00000,ko01000,ko02048	PemK-like, MazF-like toxin of type II toxin-antitoxin system
PLIICNAG_00163	1.55e-187	ydiM	-	-	G	-	-	-	Major facilitator superfamily
PLIICNAG_00164	6.29e-12	fabZ	3.5.1.108, 4.2.1.59	-	IM	ko:K16363	ko00061,ko00540,ko01100,ko01212,map00061,map00540,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004,ko01005	FabA-like domain
PLIICNAG_00165	1.34e-47	-	-	-	F	-	-	-	nucleoside 2-deoxyribosyltransferase
PLIICNAG_00166	2.18e-22	-	-	-	-	-	-	-	-
PLIICNAG_00168	1.37e-25	-	-	-	-	-	-	-	-
PLIICNAG_00170	8.93e-124	-	2.4.2.7	-	F	ko:K00759	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000,ko04147	Phosphoribosyl transferase domain
PLIICNAG_00171	7.67e-234	-	-	-	P	ko:K06901	-	ko00000,ko02000	secondary active sulfate transmembrane transporter activity
PLIICNAG_00172	2.21e-86	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
PLIICNAG_00173	1.6e-54	-	-	-	L	-	-	-	PFAM transposase, IS4 family protein
PLIICNAG_00174	0.0	XK27_00340	3.1.3.5	-	F	ko:K01081	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the 5'-nucleotidase family
PLIICNAG_00175	0.0	pepO	-	-	O	ko:K07386	-	ko00000,ko01000,ko01002	Peptidase family M13
PLIICNAG_00176	2.77e-78	-	-	-	S	ko:K07006	-	ko00000	Pyridoxamine 5'-phosphate oxidase
PLIICNAG_00177	6.45e-301	steT	-	-	E	ko:K03294	-	ko00000	amino acid
PLIICNAG_00178	1.48e-293	amd	-	-	E	-	-	-	Peptidase family M20/M25/M40
PLIICNAG_00179	1.08e-237	mmuM	2.1.1.10	-	H	ko:K00547	ko00270,ko01100,ko01110,map00270,map01100,map01110	ko00000,ko00001,ko01000	homocysteine S-methyltransferase
PLIICNAG_00180	5.93e-289	ybgF	-	-	E	ko:K02205,ko:K03293,ko:K16235,ko:K16236	-	ko00000,ko02000	amino acid
PLIICNAG_00181	3.34e-307	-	-	-	N	ko:K09384	-	ko00000	Uncharacterized conserved protein (DUF2075)
PLIICNAG_00182	1.58e-33	-	1.8.1.7	-	C	ko:K00383,ko:K21739	ko00480,ko04918,map00480,map04918	ko00000,ko00001,ko01000	Pyridine nucleotide-disulfide oxidoreductase
PLIICNAG_00183	1.37e-66	-	1.8.1.7	-	C	ko:K00383,ko:K21739	ko00480,ko04918,map00480,map04918	ko00000,ko00001,ko01000	Pyridine nucleotide-disulfide oxidoreductase
PLIICNAG_00184	7.24e-62	-	1.8.1.7	-	C	ko:K00383,ko:K21739	ko00480,ko04918,map00480,map04918	ko00000,ko00001,ko01000	Pyridine nucleotide-disulfide oxidoreductase
PLIICNAG_00185	8.08e-262	-	-	-	-	-	-	-	-
PLIICNAG_00186	0.0	-	-	-	S	-	-	-	C4-dicarboxylate anaerobic carrier
PLIICNAG_00187	4.86e-120	hpt	2.4.2.8	-	F	ko:K00760	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the purine pyrimidine phosphoribosyltransferase family
PLIICNAG_00188	5.43e-133	-	-	-	S	ko:K07038	-	ko00000	LexA-binding, inner membrane-associated putative hydrolase
PLIICNAG_00189	8.9e-51	-	-	-	-	-	-	-	-
PLIICNAG_00190	2.82e-152	patB	4.4.1.8	-	E	ko:K14155	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko01000,ko01007	Aminotransferase, class I
PLIICNAG_00191	4.15e-48	patB	4.4.1.8	-	E	ko:K14155	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko01000,ko01007	Aminotransferase, class I
PLIICNAG_00192	2.03e-73	-	-	-	-	-	-	-	-
PLIICNAG_00193	7.5e-308	brnQ	-	-	U	ko:K03311	-	ko00000	Component of the transport system for branched-chain amino acids
PLIICNAG_00194	1.33e-88	-	-	-	S	ko:K07150	-	ko00000	Protein of unknown function (DUF554)
PLIICNAG_00195	2.43e-18	-	-	-	S	ko:K07150	-	ko00000	Protein of unknown function (DUF554)
PLIICNAG_00196	5.97e-56	mleR2	-	-	K	-	-	-	LysR substrate binding domain
PLIICNAG_00197	1.85e-301	yclC	4.1.1.61, 4.1.1.98	-	H	ko:K01612,ko:K03182,ko:K16874	ko00130,ko00365,ko00627,ko01100,ko01110,ko01120,ko01220,map00130,map00365,map00627,map01100,map01110,map01120,map01220	ko00000,ko00001,ko00002,ko01000	3-octaprenyl-4-hydroxybenzoate carboxy-lyase
PLIICNAG_00198	1.4e-35	ubiX	2.5.1.129	-	H	ko:K03186	ko00130,ko00627,ko00940,ko01100,ko01110,ko01120,ko01220,map00130,map00627,map00940,map01100,map01110,map01120,map01220	ko00000,ko00001,ko00002,ko01000	Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN
PLIICNAG_00199	1.48e-25	-	-	-	-	-	-	-	-
PLIICNAG_00200	2.62e-104	tdh	1.1.1.14	-	C	ko:K00008	ko00040,ko00051,ko01100,map00040,map00051,map01100	ko00000,ko00001,ko00002,ko01000	Zinc-binding dehydrogenase
PLIICNAG_00201	5.56e-108	tdh	1.1.1.14	-	C	ko:K00008	ko00040,ko00051,ko01100,map00040,map00051,map01100	ko00000,ko00001,ko00002,ko01000	Zinc-binding dehydrogenase
PLIICNAG_00202	5.54e-09	-	-	-	-	-	-	-	-
PLIICNAG_00203	6.83e-84	glcD	1.1.3.15	-	C	ko:K00104	ko00630,ko01100,ko01110,ko01120,ko01130,map00630,map01100,map01110,map01120,map01130	ko00000,ko00001,ko01000	FAD linked oxidases, C-terminal domain
PLIICNAG_00204	2.69e-51	glcD	1.1.3.15	-	C	ko:K00104	ko00630,ko01100,ko01110,ko01120,ko01130,map00630,map01100,map01110,map01120,map01130	ko00000,ko00001,ko01000	FAD linked oxidases, C-terminal domain
PLIICNAG_00205	5.76e-54	glcD	1.1.3.15	-	C	ko:K00104	ko00630,ko01100,ko01110,ko01120,ko01130,map00630,map01100,map01110,map01120,map01130	ko00000,ko00001,ko01000	FAD linked oxidases, C-terminal domain
PLIICNAG_00206	0.0	pepV	3.5.1.18	-	E	ko:K01270,ko:K01274,ko:K01439	ko00300,ko00480,ko01100,ko01120,ko01230,map00300,map00480,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000,ko01002	dipeptidase PepV
PLIICNAG_00207	1.28e-241	flp	-	-	V	-	-	-	Beta-lactamase
PLIICNAG_00208	0.0	ppc	4.1.1.31	-	H	ko:K01595	ko00620,ko00680,ko00710,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00710,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
PLIICNAG_00209	3.44e-58	-	-	-	-	-	-	-	-
PLIICNAG_00210	7.54e-174	-	-	-	-	-	-	-	-
PLIICNAG_00211	1.6e-114	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
PLIICNAG_00212	3.57e-84	-	-	-	S	-	-	-	Protein of unknown function (DUF3021)
PLIICNAG_00213	7.65e-101	-	-	-	K	-	-	-	LytTr DNA-binding domain
PLIICNAG_00214	1.66e-56	-	-	-	-	-	-	-	-
PLIICNAG_00216	5.12e-71	yitW	-	-	S	-	-	-	Iron-sulfur cluster assembly protein
PLIICNAG_00217	2.29e-196	sdaAA	4.3.1.17	-	E	ko:K01752	ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230	ko00000,ko00001,ko01000	L-serine dehydratase, iron-sulfur-dependent, alpha subunit
PLIICNAG_00218	7.78e-158	-	4.3.1.17	-	E	ko:K01752	ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230	ko00000,ko00001,ko01000	Serine dehydratase beta chain
PLIICNAG_00219	9.93e-30	-	-	-	V	-	-	-	Abi-like protein
PLIICNAG_00220	5.65e-101	-	-	-	S	-	-	-	Protein of unknown function, DUF536
PLIICNAG_00221	0.0	-	1.8.1.7	-	C	ko:K00383,ko:K21739	ko00480,ko04918,map00480,map04918	ko00000,ko00001,ko01000	Pyridine nucleotide-disulfide oxidoreductase
PLIICNAG_00223	1.85e-55	pinR1	-	-	L	-	-	-	Helix-turn-helix domain of Hin and related proteins, a family of DNA-binding domains unique to bacteria and represented by the Hin protein of Salmonella. The basic HTH domain is a simple fold comprised of three core helices that form a right-handed
PLIICNAG_00224	6.65e-192	-	-	-	D	ko:K03496	-	ko00000,ko03036,ko04812	CobQ CobB MinD ParA nucleotide binding domain protein
PLIICNAG_00225	3.57e-47	-	-	-	-	-	-	-	-
PLIICNAG_00226	3.49e-108	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
PLIICNAG_00227	4.43e-32	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
PLIICNAG_00228	6.33e-293	pbuG	-	-	S	ko:K06901	-	ko00000,ko02000	permease
PLIICNAG_00229	1.65e-64	pinR1	-	-	L	-	-	-	Helix-turn-helix domain of Hin and related proteins, a family of DNA-binding domains unique to bacteria and represented by the Hin protein of Salmonella. The basic HTH domain is a simple fold comprised of three core helices that form a right-handed
PLIICNAG_00231	3.51e-18	-	-	-	S	-	-	-	Bacteriocin helveticin-J
PLIICNAG_00232	1.46e-139	-	-	-	S	-	-	-	Bacteriocin helveticin-J
PLIICNAG_00233	7.13e-193	-	-	-	S	-	-	-	SLAP domain
PLIICNAG_00234	4.7e-106	yjhB	3.6.1.13	-	F	ko:K01515	ko00230,map00230	ko00000,ko00001,ko01000	NUDIX domain
PLIICNAG_00235	2.89e-122	pinR1	-	-	L	-	-	-	Helix-turn-helix domain of Hin and related proteins, a family of DNA-binding domains unique to bacteria and represented by the Hin protein of Salmonella. The basic HTH domain is a simple fold comprised of three core helices that form a right-handed
PLIICNAG_00236	4.93e-54	-	-	-	-	-	-	-	-
PLIICNAG_00237	0.0	-	-	-	N	ko:K09384	-	ko00000	Uncharacterized conserved protein (DUF2075)
PLIICNAG_00238	0.0	yjcA	-	-	S	ko:K19350	ko02010,map02010	ko00000,ko00001,ko01504,ko02000	ABC transporter
PLIICNAG_00239	5.95e-111	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
PLIICNAG_00240	2.55e-61	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
PLIICNAG_00242	6.15e-156	-	-	-	-	-	-	-	-
PLIICNAG_00244	1.18e-105	-	-	-	S	-	-	-	Protein of unknown function (DUF3232)
PLIICNAG_00245	0.0	-	-	-	S	-	-	-	SLAP domain
PLIICNAG_00246	3.02e-171	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
PLIICNAG_00247	5.05e-115	-	-	-	-	-	-	-	-
PLIICNAG_00248	3.48e-26	-	-	-	-	-	-	-	-
PLIICNAG_00249	9.39e-85	-	-	-	-	-	-	-	-
PLIICNAG_00250	3.53e-32	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
PLIICNAG_00251	4.46e-165	rsuA	5.4.99.19	-	J	ko:K06183	-	ko00000,ko01000,ko03009	Belongs to the pseudouridine synthase RsuA family
PLIICNAG_00252	7.95e-182	-	-	-	K	-	-	-	Helix-turn-helix domain
PLIICNAG_00253	9.32e-293	thiI	2.8.1.4	-	H	ko:K03151	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko03016	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
PLIICNAG_00254	3.03e-277	iscS2	2.8.1.7	-	E	ko:K04487	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko02048,ko03016,ko03029	Aminotransferase class V
PLIICNAG_00255	0.0	ezrA	-	-	D	ko:K06286	-	ko00000,ko03036	modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
PLIICNAG_00256	8.8e-142	rpsD	-	-	J	ko:K02986	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
PLIICNAG_00257	3.22e-96	-	-	-	S	-	-	-	Protein of unknown function (DUF1694)
PLIICNAG_00258	5.36e-306	rarA	-	-	L	ko:K07478	-	ko00000	recombination factor protein RarA
PLIICNAG_00259	4.53e-55	-	-	-	-	-	-	-	-
PLIICNAG_00260	1.1e-102	uspA	-	-	T	-	-	-	universal stress protein
PLIICNAG_00261	5.62e-274	rodA	-	-	D	ko:K05837	-	ko00000,ko03036	Belongs to the SEDS family
PLIICNAG_00262	2.09e-45	-	-	-	S	-	-	-	Protein of unknown function (DUF2969)
PLIICNAG_00263	1.31e-67	ytjA	-	-	S	ko:K08998	-	ko00000	Could be involved in insertion of integral membrane proteins into the membrane
PLIICNAG_00264	1.68e-227	mbl	-	-	D	ko:K03569	-	ko00000,ko02048,ko03036,ko04812	Cell shape determining protein MreB Mrl
PLIICNAG_00265	1.21e-40	-	-	-	S	-	-	-	Protein of unknown function (DUF1146)
PLIICNAG_00266	1.14e-90	atpC	-	-	C	ko:K02114	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Produces ATP from ADP in the presence of a proton gradient across the membrane
PLIICNAG_00267	1.74e-316	atpD	3.6.3.14	-	C	ko:K02112	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko01000	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
PLIICNAG_00268	2.25e-216	atpG	-	-	C	ko:K02115	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
PLIICNAG_00269	0.0	atpA	3.6.3.14	-	C	ko:K02111	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko01000	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
PLIICNAG_00270	1.38e-121	atpH	-	-	C	ko:K02113	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PLIICNAG_00271	5.39e-83	atpF	-	-	C	ko:K02109	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
PLIICNAG_00272	4.83e-37	atpE	-	-	C	ko:K02110	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PLIICNAG_00273	4.82e-165	atpB	-	-	C	ko:K02108	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko03110	it plays a direct role in the translocation of protons across the membrane
PLIICNAG_00274	2.15e-145	upp	2.4.2.9	-	F	ko:K00761	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
PLIICNAG_00275	2.95e-239	ywlC	2.7.7.87	-	J	ko:K07566	-	ko00000,ko01000,ko03009,ko03016	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
PLIICNAG_00276	2.42e-200	prmC	2.1.1.297	-	J	ko:K02493	-	ko00000,ko01000,ko03012	Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
PLIICNAG_00277	7.36e-234	prfA	-	-	J	ko:K02835	-	ko00000,ko03012	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
PLIICNAG_00278	4.94e-146	tdk	2.7.1.21	-	F	ko:K00857	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	thymidine kinase
PLIICNAG_00279	0.0	murE2	6.3.2.13	-	M	ko:K01928	ko00300,ko00550,map00300,map00550	ko00000,ko00001,ko01000,ko01011	Domain of unknown function (DUF1727)
PLIICNAG_00282	6.05e-250	ampC	-	-	V	-	-	-	Beta-lactamase
PLIICNAG_00283	2.87e-52	-	-	-	EGP	-	-	-	Major Facilitator
PLIICNAG_00284	2.61e-193	-	-	-	EGP	-	-	-	Major Facilitator
PLIICNAG_00285	4.49e-09	-	-	-	S	-	-	-	Bacteriocin helveticin-J
PLIICNAG_00286	5.61e-82	-	-	-	S	-	-	-	Pyrimidine dimer DNA glycosylase
PLIICNAG_00287	3.23e-88	-	-	-	L	ko:K07482	-	ko00000	PFAM Integrase, catalytic core
PLIICNAG_00288	2.83e-27	-	-	-	-	-	-	-	-
PLIICNAG_00290	6.33e-294	glyA	2.1.2.1	-	E	ko:K00600	ko00260,ko00460,ko00630,ko00670,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko01523,map00260,map00460,map00630,map00670,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map01523	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
PLIICNAG_00291	9.75e-85	-	-	-	L	-	-	-	Resolvase, N terminal domain
PLIICNAG_00292	0.0	-	-	-	L	-	-	-	Probable transposase
PLIICNAG_00293	3e-308	amt	-	-	P	ko:K03320	-	ko00000,ko02000	ammonium transporter
PLIICNAG_00294	2e-99	-	-	-	S	ko:K07088	-	ko00000	Membrane transport protein
PLIICNAG_00295	1.56e-188	idhA	1.1.1.28	-	CH	ko:K03778	ko00620,ko01120,map00620,map01120	ko00000,ko00001,ko01000	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PLIICNAG_00296	7.66e-97	birA	6.3.4.15	-	H	ko:K03524	ko00780,ko01100,map00780,map01100	ko00000,ko00001,ko01000,ko03000	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
PLIICNAG_00297	1.44e-51	-	-	-	L	ko:K07483	-	ko00000	Transposase and inactivated derivatives
PLIICNAG_00298	5.62e-28	-	-	-	C	-	-	-	Pyridoxamine 5'-phosphate oxidase
PLIICNAG_00299	1.51e-121	-	-	-	E	-	-	-	Amino acid permease
PLIICNAG_00300	1.87e-203	-	-	-	E	-	-	-	Amino acid permease
PLIICNAG_00301	0.0	fruA	2.7.1.202	-	GT	ko:K02768,ko:K02769,ko:K02770	ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphotransferase System
PLIICNAG_00302	5.5e-31	-	-	-	L	-	-	-	Transposase
PLIICNAG_00303	2.4e-107	-	-	-	L	-	-	-	Transposase
PLIICNAG_00304	1.96e-192	-	-	-	K	ko:K09705	-	ko00000	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
PLIICNAG_00305	5.09e-28	-	-	-	K	-	-	-	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
PLIICNAG_00306	8.53e-136	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PLIICNAG_00307	0.0	-	-	-	V	-	-	-	Restriction endonuclease
PLIICNAG_00308	3.57e-316	-	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
PLIICNAG_00309	6.3e-308	-	-	-	S	-	-	-	LPXTG cell wall anchor motif
PLIICNAG_00310	9.87e-193	-	-	-	S	-	-	-	Putative ABC-transporter type IV
PLIICNAG_00311	3.65e-128	-	-	-	S	-	-	-	Cob(I)alamin adenosyltransferase
PLIICNAG_00312	6.12e-112	-	-	-	S	ko:K16927	-	ko00000,ko00002,ko02000	ECF transporter, substrate-specific component
PLIICNAG_00313	4.63e-78	-	-	-	S	-	-	-	Domain of unknown function (DUF4430)
PLIICNAG_00314	0.0	rtpR	1.17.4.2	-	F	ko:K00527	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000	ribonucleoside-triphosphate reductase activity
PLIICNAG_00315	2.43e-223	ydbI	-	-	K	-	-	-	AI-2E family transporter
PLIICNAG_00316	3.93e-134	-	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase
PLIICNAG_00317	4.97e-24	-	-	-	-	-	-	-	-
PLIICNAG_00318	2.4e-68	-	-	-	-	-	-	-	-
PLIICNAG_00319	4.47e-178	XK27_08845	-	-	S	ko:K05833	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PLIICNAG_00320	1.17e-168	XK27_08840	-	-	U	ko:K05832	-	ko00000,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
PLIICNAG_00321	7.7e-229	ABC-SBP	-	-	S	ko:K01989	-	ko00000,ko00002,ko02000	ABC transporter
PLIICNAG_00322	1.4e-172	ysaA	3.1.3.5, 3.8.1.2	-	S	ko:K01560,ko:K07025,ko:K08723	ko00230,ko00240,ko00361,ko00625,ko00760,ko01100,ko01110,ko01120,map00230,map00240,map00361,map00625,map00760,map01100,map01110,map01120	ko00000,ko00001,ko01000	Haloacid dehalogenase-like hydrolase
PLIICNAG_00323	6.05e-19	-	-	-	S	-	-	-	Bacteriocin helveticin-J
PLIICNAG_00324	2.65e-269	-	-	-	S	-	-	-	SLAP domain
PLIICNAG_00325	8.57e-211	yvgN	-	-	C	-	-	-	Aldo keto reductase
PLIICNAG_00326	0.0	fusA1	-	-	J	-	-	-	elongation factor G
PLIICNAG_00327	1.29e-196	-	3.1.3.102, 3.1.3.104	-	S	ko:K20861	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	haloacid dehalogenase-like hydrolase
PLIICNAG_00328	0.0	nisT	-	-	V	ko:K06147,ko:K20485	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko02000	ABC transporter
PLIICNAG_00329	3.65e-66	-	-	-	-	-	-	-	-
PLIICNAG_00330	3.62e-73	-	-	-	-	-	-	-	-
PLIICNAG_00331	7.58e-244	ldhA	1.1.1.28	-	C	ko:K03778,ko:K18347	ko00620,ko01120,ko01502,ko02020,map00620,map01120,map01502,map02020	ko00000,ko00001,ko00002,ko01000,ko01504	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PLIICNAG_00332	6.82e-85	-	-	-	G	-	-	-	Phosphotransferase enzyme family
PLIICNAG_00333	6.51e-116	-	-	-	G	-	-	-	Phosphotransferase enzyme family
PLIICNAG_00334	1.25e-204	xth	3.1.11.2	-	L	ko:K01142	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	exodeoxyribonuclease III
PLIICNAG_00335	0.0	-	-	-	E	ko:K20265	ko02024,map02024	ko00000,ko00001,ko02000	amino acid
PLIICNAG_00336	0.0	-	-	-	L	-	-	-	Helicase C-terminal domain protein
PLIICNAG_00337	2.55e-246	pbpX1	-	-	V	-	-	-	Beta-lactamase
PLIICNAG_00338	4.19e-92	def2	3.5.1.88	-	J	ko:K01462	-	ko00000,ko01000	Removes the formyl group from the N-terminal Met of newly synthesized proteins
PLIICNAG_00339	1.53e-164	-	-	-	-	-	-	-	-
PLIICNAG_00340	7.22e-264	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC transporter transmembrane region
PLIICNAG_00341	2.51e-31	-	-	-	S	-	-	-	Small integral membrane protein (DUF2273)
PLIICNAG_00342	2.04e-27	-	-	-	-	-	-	-	-
PLIICNAG_00343	8.5e-55	-	-	-	-	-	-	-	-
PLIICNAG_00344	3.42e-161	-	-	-	S	-	-	-	Fic/DOC family
PLIICNAG_00345	2.34e-37	-	-	-	-	-	-	-	-
PLIICNAG_00346	9.88e-39	-	-	-	C	-	-	-	Pyridoxamine 5'-phosphate oxidase
PLIICNAG_00347	2.08e-84	crcB	-	-	U	ko:K06199	-	ko00000,ko02000	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PLIICNAG_00348	6.91e-84	crcB1	-	-	U	ko:K06199	-	ko00000,ko02000	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PLIICNAG_00349	1.7e-53	-	-	-	-	-	-	-	-
PLIICNAG_00350	5.05e-242	-	-	-	S	-	-	-	SLAP domain
PLIICNAG_00351	2.32e-101	-	-	-	S	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 family transporter protein
PLIICNAG_00352	1.13e-182	-	-	-	S	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 family transporter protein
PLIICNAG_00355	9.49e-06	CNX5	2.7.7.80, 2.8.1.11	-	H	ko:K11996	ko04122,map04122	ko00000,ko00001,ko01000,ko03016,ko04121	Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Also essential during biosynthesis of the molybdenum cofactor. Acts by mediating the C-terminal thiocarboxylation of sulfur carriers URM1 and MOCS2A. Its N-terminus first activates URM1 and MOCS2A as acyl-adenylates (-COAMP), then the persulfide sulfur on the catalytic cysteine is transferred to URM1 and MOCS2A to form thiocarboxylation (-COSH) of their C-terminus. The reaction probably involves hydrogen sulfide that is generated from the persulfide intermediate and that acts as nucleophile towards URM1 and MOCS2A. Subsequently, a transient disulfide bond is formed. Does not use thiosulfate as sulfur donor
PLIICNAG_00357	9.57e-07	-	-	-	S	-	-	-	Bacteriocin helveticin-J
PLIICNAG_00358	6.7e-177	-	-	-	S	-	-	-	Bacteriocin helveticin-J
PLIICNAG_00359	0.0	-	-	-	S	-	-	-	SH3-like domain
PLIICNAG_00360	5.08e-170	supH	-	-	S	-	-	-	haloacid dehalogenase-like hydrolase
PLIICNAG_00361	0.0	ycaM	-	-	E	-	-	-	amino acid
PLIICNAG_00362	1.87e-210	-	-	-	-	-	-	-	-
PLIICNAG_00363	4.37e-69	-	-	-	-	-	-	-	-
PLIICNAG_00365	6.71e-241	cggR	-	-	K	ko:K05311	-	ko00000,ko03000	Putative sugar-binding domain
PLIICNAG_00366	1.65e-243	gap	1.2.1.12	-	G	ko:K00134	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
PLIICNAG_00367	6.01e-288	pgk	2.7.2.3	-	F	ko:K00927	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the phosphoglycerate kinase family
PLIICNAG_00368	6.64e-184	tpiA	5.3.1.1	-	G	ko:K01803	ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
PLIICNAG_00369	3.58e-124	-	-	-	-	-	-	-	-
PLIICNAG_00370	4.17e-203	ycsE	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
PLIICNAG_00371	2.33e-174	ung	3.2.2.27	-	L	ko:K03648	ko03410,ko05340,map03410,map05340	ko00000,ko00001,ko01000,ko03400	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
PLIICNAG_00372	3.84e-233	pta	2.3.1.8, 3.6.3.21	-	C	ko:K00625,ko:K02028	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000,ko02000	phosphate acetyltransferase
PLIICNAG_00373	1.87e-118	ydiB	-	-	O	ko:K06925	-	ko00000,ko03016	Hydrolase, P-loop family
PLIICNAG_00374	7.47e-128	dnaQ	2.7.7.7	-	L	ko:K02342	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III
PLIICNAG_00375	1.47e-210	murB	1.3.1.98	-	M	ko:K00075	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation
PLIICNAG_00376	4.51e-262	potA	3.6.3.30, 3.6.3.31	-	P	ko:K02010,ko:K11072	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
PLIICNAG_00377	1.85e-174	potB	-	-	P	ko:K11071	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
PLIICNAG_00378	3.23e-180	potC	-	-	P	ko:K11070	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
PLIICNAG_00379	1.71e-266	potD	-	-	P	ko:K11069	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
PLIICNAG_00380	8.69e-194	dacA	2.7.7.85	-	S	ko:K18672	-	ko00000,ko01000	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
PLIICNAG_00381	4.34e-217	ybbR	-	-	S	-	-	-	YbbR-like protein
PLIICNAG_00382	0.0	glmM	5.4.2.10	-	G	ko:K03431	ko00520,ko01100,ko01130,map00520,map01100,map01130	ko00000,ko00001,ko01000	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
PLIICNAG_00383	1.69e-191	-	-	-	S	-	-	-	hydrolase
PLIICNAG_00384	6.89e-191	-	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
PLIICNAG_00385	3.08e-152	-	-	-	-	-	-	-	-
PLIICNAG_00386	3.42e-111	ptpA	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
PLIICNAG_00387	5.85e-274	glxK	2.7.1.165	-	G	ko:K00865	ko00260,ko00561,ko00630,ko01100,ko01120,ko01130,map00260,map00561,map00630,map01100,map01120,map01130	ko00000,ko00001,ko01000	Belongs to the glycerate kinase type-1 family
PLIICNAG_00388	2.25e-182	bglG5	-	-	K	ko:K03488	-	ko00000,ko03000	CAT RNA binding domain
PLIICNAG_00389	0.0	pts33BCA	-	-	G	ko:K02755,ko:K02756,ko:K02757	ko02060,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
PLIICNAG_00390	1.23e-27	-	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
PLIICNAG_00391	0.0	-	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
PLIICNAG_00392	9.83e-235	ybcH	-	-	D	ko:K06889	-	ko00000	Alpha beta
PLIICNAG_00393	0.0	-	-	-	E	-	-	-	Amino acid permease
PLIICNAG_00394	1.34e-200	glcU	-	-	U	ko:K05340	-	ko00000,ko02000	sugar transport
PLIICNAG_00395	2.61e-195	-	-	-	L	-	-	-	Phage integrase, N-terminal SAM-like domain
PLIICNAG_00396	2.28e-83	repA	-	-	S	-	-	-	Replication initiator protein A
PLIICNAG_00405	3.83e-213	-	-	-	-	-	-	-	-
PLIICNAG_00406	2.37e-104	ywdE	-	-	K	ko:K20375	ko02024,map02024	ko00000,ko00001,ko03000	Transcriptional regulator
PLIICNAG_00407	6.97e-37	-	-	-	K	-	-	-	Transcriptional regulator, AbiEi antitoxin
PLIICNAG_00408	1.64e-108	-	-	-	L	-	-	-	Integrase
PLIICNAG_00409	1.11e-24	-	-	-	L	-	-	-	Helix-turn-helix domain
PLIICNAG_00410	1.02e-66	-	-	-	F	-	-	-	NUDIX domain
PLIICNAG_00411	3.84e-62	-	-	-	C	-	-	-	Domain of unknown function (DUF4931)
PLIICNAG_00412	1.35e-155	-	-	-	-	-	-	-	-
PLIICNAG_00413	2.06e-183	XK27_08125	-	-	S	ko:K09861	-	ko00000	Belongs to the UPF0246 family
PLIICNAG_00414	5.44e-178	-	-	-	S	ko:K06889	-	ko00000	Alpha/beta hydrolase family
PLIICNAG_00415	4.23e-145	-	-	-	G	-	-	-	phosphoglycerate mutase
PLIICNAG_00416	1.34e-120	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PLIICNAG_00417	2.26e-228	yxeA	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter permease
PLIICNAG_00418	4.83e-154	lolD	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PLIICNAG_00419	0.0	pepD4	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
PLIICNAG_00420	4.74e-51	-	-	-	-	-	-	-	-
PLIICNAG_00421	4.79e-140	-	-	-	K	-	-	-	WHG domain
PLIICNAG_00422	1.62e-123	azo1	1.5.1.36, 1.7.1.6	-	S	ko:K03206,ko:K19784,ko:K22393	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	NADPH-dependent FMN reductase
PLIICNAG_00423	1.82e-126	azr	1.5.1.36	-	S	ko:K22394	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	NADPH-dependent FMN reductase
PLIICNAG_00424	1.06e-190	-	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Tyrosine phosphatase family
PLIICNAG_00425	3.16e-231	apbE	2.7.1.180	-	H	ko:K03734	-	ko00000,ko01000	Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
PLIICNAG_00426	2.12e-114	cvpA	-	-	S	-	-	-	Colicin V production protein
PLIICNAG_00427	9.37e-169	rsmG	2.1.1.170	-	J	ko:K03501	-	ko00000,ko01000,ko03009,ko03036	Specifically methylates the N7 position of a guanine in 16S rRNA
PLIICNAG_00428	3.14e-191	noc	-	-	K	ko:K03497	-	ko00000,ko03000,ko03036,ko04812	Belongs to the ParB family
PLIICNAG_00429	2.77e-175	soj	-	-	D	ko:K03496	-	ko00000,ko03036,ko04812	Sporulation initiation inhibitor
PLIICNAG_00430	1.61e-196	spo0J	-	-	K	ko:K03497	-	ko00000,ko03000,ko03036,ko04812	Belongs to the ParB family
PLIICNAG_00431	1.83e-58	yyzM	-	-	S	-	-	-	Bacterial protein of unknown function (DUF951)
PLIICNAG_00432	2.8e-256	ychF	-	-	J	ko:K06942	-	ko00000,ko03009	ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
PLIICNAG_00433	1.88e-178	-	-	-	S	-	-	-	Protein of unknown function (DUF1129)
PLIICNAG_00434	0.0	-	-	-	V	ko:K06147,ko:K06148	-	ko00000,ko02000	ABC transporter, ATP-binding protein
PLIICNAG_00435	0.0	ndvA	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter
PLIICNAG_00436	2.9e-157	vanR	-	-	K	-	-	-	response regulator
PLIICNAG_00437	2.54e-267	-	-	-	T	-	-	-	His Kinase A (phosphoacceptor) domain
PLIICNAG_00438	0.0	murE	6.3.2.13, 6.3.2.7	-	M	ko:K01928,ko:K05362	ko00300,ko00550,ko01100,map00300,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
PLIICNAG_00439	3.86e-186	racD	5.1.1.13	-	M	ko:K01779	ko00250,ko01054,map00250,map01054	ko00000,ko00001,ko01000	Belongs to the aspartate glutamate racemases family
PLIICNAG_00440	1.28e-267	-	-	-	S	ko:K06921	-	ko00000	Archaea bacterial proteins of unknown function
PLIICNAG_00441	9.12e-21	-	-	-	S	-	-	-	Enterocin A Immunity
PLIICNAG_00442	4.94e-49	-	-	-	S	-	-	-	Enterocin A Immunity
PLIICNAG_00443	8.68e-46	-	-	-	K	ko:K07727	-	ko00000,ko03000	Transcriptional regulator
PLIICNAG_00444	8.68e-44	-	-	-	-	-	-	-	-
PLIICNAG_00445	4.7e-35	-	-	-	-	-	-	-	-
PLIICNAG_00446	0.0	agl	3.2.1.20	GH31	G	ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 31 family
PLIICNAG_00449	2.38e-176	fruR	-	-	K	ko:K03436	-	ko00000,ko03000	DeoR C terminal sensor domain
PLIICNAG_00450	1.26e-214	pfkB	2.7.1.56	-	H	ko:K00882	ko00051,map00051	ko00000,ko00001,ko01000	Belongs to the carbohydrate kinase PfkB family. LacC subfamily
PLIICNAG_00461	3.58e-181	-	-	-	L	-	-	-	COG3547 Transposase and inactivated derivatives
PLIICNAG_00462	2.24e-203	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
PLIICNAG_00463	1.16e-128	clpP	3.4.21.92	-	O	ko:K01358	ko04112,ko04212,map04112,map04212	ko00000,ko00001,ko01000,ko01002	Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
PLIICNAG_00464	2.91e-117	-	-	-	-	-	-	-	-
PLIICNAG_00465	9.45e-196	yhaX	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
PLIICNAG_00466	6.18e-52	rpmE	-	-	J	ko:K02909	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L31
PLIICNAG_00467	0.0	murF	6.3.2.10	-	M	ko:K01929	ko00300,ko00550,ko01100,ko01502,map00300,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
PLIICNAG_00468	0.0	cshA	3.6.4.13	-	F	ko:K05592	ko03018,map03018	ko00000,ko00001,ko01000,ko03009,ko03019	DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
PLIICNAG_00469	6.61e-80	acpS	2.7.8.7	-	I	ko:K00997	ko00770,map00770	ko00000,ko00001,ko01000	Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
PLIICNAG_00470	9.35e-276	alr	5.1.1.1, 5.1.1.5	-	E	ko:K01775,ko:K20707	ko00473,ko01100,ko01502,map00473,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
PLIICNAG_00471	2.05e-120	-	-	-	K	-	-	-	transcriptional regulator
PLIICNAG_00472	2.39e-164	-	-	-	S	-	-	-	(CBS) domain
PLIICNAG_00473	3.42e-233	ldh	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	Belongs to the LDH MDH superfamily. LDH family
PLIICNAG_00474	1.55e-133	pth	3.1.1.29	-	J	ko:K01056	-	ko00000,ko01000,ko03012	The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
PLIICNAG_00475	0.0	mfd	-	-	L	ko:K03723	ko03420,map03420	ko00000,ko00001,ko01000,ko03400	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
PLIICNAG_00476	1.26e-46	yabO	-	-	J	-	-	-	S4 domain protein
PLIICNAG_00477	1.46e-75	divIC	-	-	D	ko:K13052	-	ko00000,ko03036	Septum formation initiator
PLIICNAG_00478	1.4e-62	-	-	-	J	ko:K07571	-	ko00000	S1 RNA binding domain
PLIICNAG_00479	2.52e-309	tilS	2.4.2.8, 6.3.4.19	-	J	ko:K04075,ko:K15780	ko00230,ko01100,ko01110,map00230,map01100,map01110	ko00000,ko00001,ko01000,ko03016	Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
PLIICNAG_00480	0.0	ftsH	-	-	O	ko:K03798	-	ko00000,ko00002,ko01000,ko01002,ko03110	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
PLIICNAG_00481	5.97e-209	hslO	-	-	O	ko:K04083	-	ko00000,ko03110	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
PLIICNAG_00482	4.78e-249	dus	-	-	J	ko:K05540	-	ko00000,ko01000,ko03016	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PLIICNAG_00483	0.0	lysS	6.1.1.6	-	J	ko:K04567	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-II aminoacyl-tRNA synthetase family
PLIICNAG_00485	3.94e-37	-	-	-	-	-	-	-	-
PLIICNAG_00488	7.84e-106	ytsP	1.8.4.14	-	T	ko:K08968	ko00270,map00270	ko00000,ko00001,ko01000	GAF domain-containing protein
PLIICNAG_00489	0.0	clpC	-	-	O	ko:K03696	ko01100,map01100	ko00000,ko03110	Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
PLIICNAG_00490	0.0	rpoB	2.7.7.6	-	K	ko:K03043	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PLIICNAG_00491	0.0	rpoC	2.7.7.6	-	K	ko:K03046	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PLIICNAG_00492	7e-146	-	-	-	L	ko:K07497	-	ko00000	COG2963 Transposase and inactivated derivatives
PLIICNAG_00493	1.06e-111	-	-	-	L	-	-	-	Resolvase, N terminal domain
PLIICNAG_00494	1.01e-74	-	-	-	-	-	-	-	-
PLIICNAG_00496	2.27e-64	-	-	-	-	-	-	-	-
PLIICNAG_00500	1.38e-52	-	-	-	-	-	-	-	-
PLIICNAG_00501	4.38e-305	purD	6.3.4.13	-	F	ko:K01945	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the GARS family
PLIICNAG_00502	0.0	purH	2.1.2.3, 3.5.4.10	-	F	ko:K00602	ko00230,ko00670,ko01100,ko01110,ko01130,ko01523,map00230,map00670,map01100,map01110,map01130,map01523	ko00000,ko00001,ko00002,ko01000,ko04147	Bifunctional purine biosynthesis protein PurH
PLIICNAG_00503	1.03e-133	purN	2.1.2.2	-	F	ko:K11175	ko00230,ko00670,ko01100,ko01110,ko01130,map00230,map00670,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
PLIICNAG_00504	1.08e-247	purM	6.3.3.1	-	F	ko:K01933	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Phosphoribosylformylglycinamidine cyclo-ligase
PLIICNAG_00505	0.0	purF	2.4.2.14	-	F	ko:K00764	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko01002	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
PLIICNAG_00506	0.0	purL	6.3.5.3	-	F	ko:K01952	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PLIICNAG_00507	1.56e-154	purQ	6.3.5.3	-	F	ko:K01952	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PLIICNAG_00508	1.27e-50	purS	6.3.5.3	-	F	ko:K01952	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PLIICNAG_00509	6.88e-170	purC	6.3.2.6	-	F	ko:K01923	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the SAICAR synthetase family
PLIICNAG_00510	2.69e-276	purK	6.3.4.18	-	F	ko:K01589	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
PLIICNAG_00511	1.87e-102	purE	5.4.99.18	-	F	ko:K01588	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
PLIICNAG_00512	0.0	fhs	6.3.4.3	-	F	ko:K01938	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Belongs to the formate--tetrahydrofolate ligase family
PLIICNAG_00513	4.17e-143	-	-	-	C	-	-	-	Flavodoxin
PLIICNAG_00514	1.05e-06	-	-	-	C	-	-	-	Flavodoxin
PLIICNAG_00515	9.65e-193	hflC	-	-	O	ko:K04087	-	ko00000,ko00002,ko01000	prohibitin homologues
PLIICNAG_00516	1.87e-68	-	-	-	L	ko:K07473	-	ko00000,ko02048	RelB antitoxin
PLIICNAG_00517	1.74e-28	-	-	-	-	-	-	-	-
PLIICNAG_00518	4.58e-248	-	-	-	S	-	-	-	Bacteriocin helveticin-J
PLIICNAG_00519	1.05e-47	-	-	-	M	-	-	-	Peptidase family M1 domain
PLIICNAG_00520	2.69e-178	-	-	-	M	-	-	-	Peptidase family M1 domain
PLIICNAG_00521	2.61e-76	-	-	-	M	-	-	-	Peptidase family M1 domain
PLIICNAG_00522	6.81e-225	-	-	-	S	-	-	-	SLAP domain
PLIICNAG_00523	0.0	murC	6.3.2.8	-	M	ko:K01924	ko00471,ko00550,ko01100,map00471,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Belongs to the MurCDEF family
PLIICNAG_00524	0.0	-	-	-	S	-	-	-	SLAP domain
PLIICNAG_00525	3.06e-157	XK27_10290	-	-	J	ko:K06878	-	ko00000	Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PLIICNAG_00526	1.64e-72	ytpP	-	-	CO	-	-	-	Thioredoxin
PLIICNAG_00527	4.52e-160	trmB	2.1.1.33	-	J	ko:K03439	-	ko00000,ko01000,ko03016	Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
PLIICNAG_00528	1.26e-269	ecsB	-	-	U	ko:K01992	-	ko00000,ko00002,ko02000	ABC transporter
PLIICNAG_00529	9.02e-175	ecsA	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PLIICNAG_00530	6.86e-72	-	-	-	K	ko:K21498	-	ko00000,ko02048	Helix-turn-helix XRE-family like proteins
PLIICNAG_00531	2.77e-103	hit	-	-	FG	ko:K02503	-	ko00000,ko04147	Scavenger mRNA decapping enzyme C-term binding
PLIICNAG_00532	6.03e-57	-	-	-	-	-	-	-	-
PLIICNAG_00533	2.68e-198	prsA	5.2.1.8	-	M	ko:K07533	-	ko00000,ko01000,ko03110	Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
PLIICNAG_00534	3.42e-41	-	-	-	S	-	-	-	Transglycosylase associated protein
PLIICNAG_00535	1.14e-23	-	-	-	-	-	-	-	-
PLIICNAG_00536	1.38e-33	-	-	-	-	-	-	-	-
PLIICNAG_00537	7.53e-98	-	-	-	L	-	-	-	Probable transposase
PLIICNAG_00538	1.13e-90	-	-	-	KLT	-	-	-	Protein kinase domain
PLIICNAG_00539	4.14e-81	tagD	2.7.7.39	-	IM	ko:K00980	ko00564,map00564	ko00000,ko00001,ko01000	Glycerol-3-phosphate cytidylyltransferase
PLIICNAG_00540	6.81e-234	tcsA	-	-	S	ko:K02058,ko:K07335	-	ko00000,ko00002,ko02000	ABC transporter substrate-binding protein PnrA-like
PLIICNAG_00541	9.19e-312	mglA	3.6.3.17	-	S	ko:K02056,ko:K06400	-	ko00000,ko00002,ko01000,ko02000	ABC transporter
PLIICNAG_00542	2.99e-242	mglC	-	-	S	ko:K02057	-	ko00000,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
PLIICNAG_00543	2.16e-213	yufQ	-	-	S	ko:K02057	-	ko00000,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
PLIICNAG_00544	0.0	yoaB	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	P-type ATPase
PLIICNAG_00545	1.52e-268	eriC	-	-	P	ko:K03281	-	ko00000	chloride
PLIICNAG_00546	1.08e-52	-	-	-	O	-	-	-	Matrixin
PLIICNAG_00547	2.92e-61	-	-	-	S	-	-	-	Domain of unknown function (DUF4160)
PLIICNAG_00548	0.0	guaA	6.3.5.2	-	F	ko:K01951	ko00230,ko00983,ko01100,map00230,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko01002	Catalyzes the synthesis of GMP from XMP
PLIICNAG_00549	5.15e-24	-	-	-	K	-	-	-	Helix-turn-helix
PLIICNAG_00550	3.71e-23	-	-	-	K	-	-	-	Helix-turn-helix
PLIICNAG_00551	5.85e-69	-	-	-	K	-	-	-	DNA-binding helix-turn-helix protein
PLIICNAG_00552	2.34e-127	xpt	2.4.2.22	-	F	ko:K03816	ko00230,ko01100,ko01110,map00230,map01100,map01110	ko00000,ko00001,ko01000	Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
PLIICNAG_00553	2e-284	pbuX	-	-	F	ko:K03458,ko:K16169	-	ko00000,ko02000	xanthine permease
PLIICNAG_00554	1.16e-204	msmR	-	-	K	-	-	-	AraC-like ligand binding domain
PLIICNAG_00555	0.0	pepDA	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
PLIICNAG_00556	5.99e-26	-	-	-	-	-	-	-	-
PLIICNAG_00557	6.93e-85	-	-	-	L	ko:K07484	-	ko00000	IS66 Orf2 like protein
PLIICNAG_00558	1.3e-44	-	-	-	S	-	-	-	Transposase C of IS166 homeodomain
PLIICNAG_00559	0.0	-	-	-	L	ko:K07484	-	ko00000	Transposase IS66 family
PLIICNAG_00560	5.45e-52	-	-	-	S	-	-	-	Haloacid dehalogenase-like hydrolase
PLIICNAG_00561	9.13e-43	-	-	-	S	-	-	-	Haloacid dehalogenase-like hydrolase
PLIICNAG_00562	3.13e-311	murA	2.5.1.7	-	M	ko:K00790	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PLIICNAG_00563	0.0	pyrG	6.3.4.2	-	F	ko:K01937	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
PLIICNAG_00564	5.46e-95	rpoE	-	-	K	ko:K03048	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko03021,ko03400	Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
PLIICNAG_00565	6.77e-87	-	-	-	S	-	-	-	Domain of unknown function (DUF1934)
PLIICNAG_00566	0.0	-	-	-	S	ko:K06885	-	ko00000	Metal dependent phosphohydrolases with conserved 'HD' motif.
PLIICNAG_00567	5.78e-57	-	-	-	-	-	-	-	-
PLIICNAG_00568	7.09e-189	-	-	-	GK	-	-	-	ROK family
PLIICNAG_00569	6.3e-225	prs	2.7.6.1	-	F	ko:K00948	ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PLIICNAG_00570	5.78e-245	-	-	-	S	-	-	-	SLAP domain
PLIICNAG_00571	2.13e-186	sufC	-	-	O	ko:K09013	-	ko00000,ko02000	FeS assembly ATPase SufC
PLIICNAG_00572	1.58e-301	sufD	-	-	O	ko:K07033,ko:K09015	-	ko00000	FeS assembly protein SufD
PLIICNAG_00573	4.69e-301	sufS	2.8.1.7, 4.4.1.16	-	E	ko:K11717	ko00450,ko01100,map00450,map01100	ko00000,ko00001,ko01000	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
PLIICNAG_00574	1.51e-104	nifU	-	-	C	ko:K04488	-	ko00000	SUF system FeS assembly protein, NifU family
PLIICNAG_00575	0.0	sufB	-	-	O	ko:K07033,ko:K09014	-	ko00000	assembly protein SufB
PLIICNAG_00576	8.76e-73	yitW	-	-	S	-	-	-	Iron-sulfur cluster assembly protein
PLIICNAG_00577	4.25e-82	-	-	-	S	-	-	-	Enterocin A Immunity
PLIICNAG_00578	7.33e-37	-	-	-	K	ko:K22103	-	ko00000,ko03000	DeoR C terminal sensor domain
PLIICNAG_00579	3.78e-60	-	-	-	K	ko:K22103	-	ko00000,ko03000	DeoR C terminal sensor domain
PLIICNAG_00580	0.0	xfp	4.1.2.22, 4.1.2.9	-	G	ko:K01621	ko00030,ko00710,ko01100,ko01120,map00030,map00710,map01100,map01120	ko00000,ko00001,ko01000	Phosphoketolase
PLIICNAG_00581	3.74e-205	-	-	-	S	-	-	-	Phospholipase, patatin family
PLIICNAG_00582	2.65e-18	-	2.7.13.3	-	T	ko:K07706	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	GHKL domain
PLIICNAG_00583	2.23e-110	-	-	-	S	-	-	-	hydrolase
PLIICNAG_00584	0.0	glvC	2.7.1.208	-	G	ko:K02749,ko:K02750	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system, EIIB
PLIICNAG_00585	3.08e-175	glvR	-	-	K	ko:K03481	-	ko00000,ko03000	Helix-turn-helix domain, rpiR family
PLIICNAG_00586	1.5e-94	-	-	-	-	-	-	-	-
PLIICNAG_00587	6.56e-112	ptbA	2.7.1.208	-	G	ko:K02755,ko:K02777,ko:K20107,ko:K20108	ko00010,ko00500,ko00520,ko02026,ko02060,ko05111,map00010,map00500,map00520,map02026,map02060,map05111	ko00000,ko00001,ko00002,ko01000,ko02000	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
PLIICNAG_00588	3.51e-53	-	-	-	-	-	-	-	-
PLIICNAG_00589	1.26e-11	-	-	-	C	-	-	-	nitroreductase
PLIICNAG_00590	1.31e-39	-	-	-	C	-	-	-	nitroreductase
PLIICNAG_00591	1.91e-314	yhdP	-	-	S	-	-	-	Transporter associated domain
PLIICNAG_00592	6.05e-133	hpt	2.4.2.8	-	F	ko:K00760	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the purine pyrimidine phosphoribosyltransferase family
PLIICNAG_00593	4.81e-273	-	-	-	E	ko:K03294	-	ko00000	amino acid
PLIICNAG_00594	4.29e-162	lys	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
PLIICNAG_00595	6.71e-268	yfmL	-	-	L	-	-	-	DEAD DEAH box helicase
PLIICNAG_00596	2.31e-314	chbC	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PLIICNAG_00598	5.82e-35	-	-	-	-	-	-	-	-
PLIICNAG_00599	9.39e-278	mnaA	5.1.3.14	-	G	ko:K01791	ko00520,ko01100,ko05111,map00520,map01100,map05111	ko00000,ko00001,ko00002,ko01000,ko01005	Belongs to the UDP-N-acetylglucosamine 2-epimerase family
PLIICNAG_00600	5.57e-114	gtcA1	-	-	S	-	-	-	Teichoic acid glycosylation protein
PLIICNAG_00601	3.48e-103	ykuP	-	-	C	ko:K03839	-	ko00000	Flavodoxin
PLIICNAG_00602	9.98e-211	map	3.4.11.18	-	E	ko:K01265	-	ko00000,ko01000,ko01002	Methionine Aminopeptidase
PLIICNAG_00603	7.94e-199	rbn	-	-	S	ko:K07058	-	ko00000	Belongs to the UPF0761 family
PLIICNAG_00604	2.01e-213	galU	2.7.7.9	-	M	ko:K00963	ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	UTP-glucose-1-phosphate uridylyltransferase
PLIICNAG_00605	4.98e-20	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
PLIICNAG_00606	5.27e-38	-	-	-	L	ko:K07497	-	ko00000	COG2963 Transposase and inactivated derivatives
PLIICNAG_00607	5.04e-71	-	-	-	-	-	-	-	-
PLIICNAG_00608	7.41e-131	dut	3.6.1.23	-	F	ko:K01520	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	dUTP diphosphatase
PLIICNAG_00609	0.0	radA	-	-	O	ko:K04485	-	ko00000,ko03400	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
PLIICNAG_00610	0.0	gltX	6.1.1.24	-	J	ko:K09698	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
PLIICNAG_00611	0.0	cysS	6.1.1.16	-	J	ko:K01883	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-I aminoacyl-tRNA synthetase family
PLIICNAG_00612	2.1e-99	mrnC	-	-	J	ko:K11145	-	ko00000,ko01000,ko03009	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
PLIICNAG_00613	1.76e-178	trmH	2.1.1.185	-	J	ko:K03218	-	ko00000,ko01000,ko03009	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PLIICNAG_00614	2.12e-120	comX	-	-	K	ko:K03088,ko:K03091,ko:K12296	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko03000,ko03021	Belongs to the sigma-70 factor family
PLIICNAG_00615	1.4e-44	-	-	-	-	-	-	-	-
PLIICNAG_00616	0.0	gntK	2.7.1.12	-	G	ko:K00851	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko01000	Belongs to the FGGY kinase family
PLIICNAG_00617	0.0	dxs	2.2.1.7	-	H	ko:K01662	ko00730,ko00900,ko01100,ko01110,ko01130,map00730,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
PLIICNAG_00618	1.21e-33	secE	-	-	U	ko:K03073	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
PLIICNAG_00619	8.63e-131	nusG	-	-	K	ko:K02601	-	ko00000,ko03009,ko03021	Participates in transcription elongation, termination and antitermination
PLIICNAG_00620	3.82e-90	rplK	-	-	J	ko:K02867	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
PLIICNAG_00621	3.02e-160	rplA	-	-	J	ko:K02863	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
PLIICNAG_00622	4.5e-200	pstS	-	-	P	ko:K02040	ko02010,ko02020,ko05152,map02010,map02020,map05152	ko00000,ko00001,ko00002,ko02000	Phosphate
PLIICNAG_00623	4.05e-220	pstC	-	-	P	ko:K02037	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	probably responsible for the translocation of the substrate across the membrane
PLIICNAG_00624	9.02e-199	pstA	-	-	P	ko:K02038	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Phosphate transport system permease protein PstA
PLIICNAG_00625	2.49e-185	pstB2	3.6.3.27	-	P	ko:K02036	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PLIICNAG_00626	2.31e-179	pstB1	3.6.3.27	-	P	ko:K02036	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PLIICNAG_00627	1.43e-151	phoU	-	-	P	ko:K02039	-	ko00000	Plays a role in the regulation of phosphate uptake
PLIICNAG_00628	3.34e-13	ywkB	-	-	S	ko:K07088	-	ko00000	Membrane transport protein
PLIICNAG_00629	3.89e-197	ywkB	-	-	S	ko:K07088	-	ko00000	Membrane transport protein
PLIICNAG_00630	1.77e-109	rplJ	-	-	J	ko:K02864	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
PLIICNAG_00631	2.56e-69	rplL	-	-	J	ko:K02935	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
PLIICNAG_00632	4e-117	-	2.1.1.172	-	J	ko:K00564,ko:K10716	-	ko00000,ko01000,ko02000,ko03009	Ion channel
PLIICNAG_00633	4.71e-149	rsmC	2.1.1.172	-	J	ko:K00564	-	ko00000,ko01000,ko03009	Methyltransferase
PLIICNAG_00634	9.21e-120	tadA	3.5.4.33	-	F	ko:K11991	-	ko00000,ko01000,ko03016	Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
PLIICNAG_00635	0.0	dnaX	2.7.7.7	-	L	ko:K02343	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PLIICNAG_00636	6.03e-57	yaaK	-	-	S	ko:K09747	-	ko00000	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
PLIICNAG_00637	5.33e-141	recR	-	-	L	ko:K06187	ko03440,map03440	ko00000,ko00001,ko03400	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
PLIICNAG_00638	5.61e-45	-	-	-	S	-	-	-	Protein of unknown function (DUF2508)
PLIICNAG_00639	2.41e-148	tmk	2.7.4.9	-	F	ko:K00943	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
PLIICNAG_00640	8.82e-68	yaaQ	-	-	S	-	-	-	Cyclic-di-AMP receptor
PLIICNAG_00641	3.42e-198	holB	2.7.7.7	-	L	ko:K02341	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III
PLIICNAG_00642	1.35e-78	yabA	-	-	L	-	-	-	Involved in initiation control of chromosome replication
PLIICNAG_00643	2.23e-198	rsmI	2.1.1.198	-	H	ko:K07056	-	ko00000,ko01000,ko03009	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
PLIICNAG_00644	3.43e-182	fat	3.1.2.21	-	I	ko:K01071	ko00061,ko01100,map00061,map01100	ko00000,ko00001,ko01000,ko01004	Acyl-ACP thioesterase
PLIICNAG_00645	9.09e-113	-	-	-	S	-	-	-	ECF transporter, substrate-specific component
PLIICNAG_00646	2.22e-168	yeaZ	2.3.1.234	-	O	ko:K01409,ko:K14742	-	ko00000,ko01000,ko03016	Universal bacterial protein YeaZ
PLIICNAG_00647	1.6e-131	rimI	2.3.1.128	-	K	ko:K03789	-	ko00000,ko01000,ko03009	Ribosomal-protein-alanine acetyltransferase
PLIICNAG_00648	5.09e-248	tsaD	2.3.1.234	-	J	ko:K01409	-	ko00000,ko01000,ko03016	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
PLIICNAG_00649	4.97e-160	deoC	4.1.2.4	-	F	ko:K01619	ko00030,map00030	ko00000,ko00001,ko01000	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
PLIICNAG_00650	3.42e-233	-	-	-	S	-	-	-	Oxidoreductase family, NAD-binding Rossmann fold
PLIICNAG_00651	9.39e-167	frlR1	-	-	K	ko:K03710,ko:K10711	-	ko00000,ko03000	UTRA
PLIICNAG_00652	3.87e-12	-	-	-	S	-	-	-	Toxin ToxN, type III toxin-antitoxin system
PLIICNAG_00653	1.35e-140	bbsF_1	2.8.3.19	-	C	ko:K18702	-	ko00000,ko01000	Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
PLIICNAG_00654	1.97e-136	bbsF_1	2.8.3.19	-	C	ko:K18702	-	ko00000,ko01000	Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
PLIICNAG_00655	9.31e-142	frc	2.8.3.16	-	C	ko:K07749	-	ko00000,ko01000	Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
PLIICNAG_00656	3.89e-46	spxB	1.2.3.3, 1.2.5.1, 2.2.1.6, 4.1.1.8	-	EH	ko:K00156,ko:K00158,ko:K01577,ko:K01652	ko00290,ko00620,ko00630,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00620,map00630,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the TPP enzyme family
PLIICNAG_00657	5.37e-274	spxB	1.2.3.3, 1.2.5.1, 2.2.1.6, 4.1.1.8	-	EH	ko:K00156,ko:K00158,ko:K01577,ko:K01652	ko00290,ko00620,ko00630,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00620,map00630,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the TPP enzyme family
PLIICNAG_00658	2.43e-17	spxB	1.2.3.3, 1.2.5.1, 2.2.1.6, 4.1.1.8	-	EH	ko:K00156,ko:K00158,ko:K01577,ko:K01652	ko00290,ko00620,ko00630,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00620,map00630,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the TPP enzyme family
PLIICNAG_00659	0.0	ydiF	-	-	S	ko:K06158	-	ko00000,ko03012	ABC transporter, ATP-binding protein
PLIICNAG_00660	3.4e-150	rex	-	-	K	ko:K01926	-	ko00000,ko03000	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
PLIICNAG_00661	4.34e-101	-	-	-	K	-	-	-	LytTr DNA-binding domain
PLIICNAG_00662	1.26e-161	-	-	-	S	-	-	-	membrane
PLIICNAG_00663	1.39e-230	scrR	-	-	K	ko:K02529,ko:K03484	-	ko00000,ko03000	Transcriptional regulator, LacI family
PLIICNAG_00664	2.3e-290	scrB	3.2.1.26	GH32	G	ko:K01193	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	invertase
PLIICNAG_00665	0.0	scrA	2.7.1.211	-	G	ko:K02808,ko:K02809,ko:K02810	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
PLIICNAG_00666	7.04e-63	-	-	-	-	-	-	-	-
PLIICNAG_00667	9.71e-116	-	-	-	-	-	-	-	-
PLIICNAG_00668	9.06e-60	groS	-	-	O	ko:K04078	-	ko00000,ko03029,ko03110	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
PLIICNAG_00669	0.0	groL	-	-	O	ko:K04077	ko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
PLIICNAG_00670	0.0	mutS	-	-	L	ko:K03555	ko03430,map03430	ko00000,ko00001,ko03400	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
PLIICNAG_00671	0.0	mutL	-	-	L	ko:K03572	ko03430,map03430	ko00000,ko00001,ko03400	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
PLIICNAG_00672	1.47e-132	ruvA	3.6.4.12	-	L	ko:K03550	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
PLIICNAG_00673	4.17e-237	ruvB	3.6.4.12	-	L	ko:K03551	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
PLIICNAG_00674	1.42e-76	yajC	-	-	U	ko:K03210	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Preprotein translocase
PLIICNAG_00675	0.0	zwf	1.1.1.363, 1.1.1.49	-	G	ko:K00036	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,ko05230,map00030,map00480,map01100,map01110,map01120,map01130,map01200,map05230	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
PLIICNAG_00676	9.26e-270	dinB	2.7.7.7	-	L	ko:K02346	-	ko00000,ko01000,ko03400	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
PLIICNAG_00677	1.56e-231	nrnA	3.1.13.3, 3.1.3.7	-	S	ko:K06881	ko00920,ko01100,ko01120,map00920,map01100,map01120	ko00000,ko00001,ko01000,ko03400	DHHA1 domain protein
PLIICNAG_00678	6.38e-313	cshB	3.6.4.13	-	JKL	ko:K05592,ko:K18692	ko03018,map03018	ko00000,ko00001,ko01000,ko03009,ko03019	DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
PLIICNAG_00679	4.97e-56	-	-	-	-	-	-	-	-
PLIICNAG_00680	3.15e-67	-	-	-	-	-	-	-	-
PLIICNAG_00681	0.0	alaS	6.1.1.7	-	J	ko:K01872	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
PLIICNAG_00682	5.32e-57	yrzL	-	-	S	-	-	-	Belongs to the UPF0297 family
PLIICNAG_00683	2.69e-95	yrrK	-	-	J	ko:K07447	-	ko00000,ko01000	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
PLIICNAG_00684	4.8e-66	yrzB	-	-	S	-	-	-	Belongs to the UPF0473 family
PLIICNAG_00685	0.0	mutS2	-	-	L	ko:K07456	ko03430,map03430	ko00000,ko00001,ko03400	Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
PLIICNAG_00686	5.37e-72	trxA	-	-	O	ko:K03671	ko04621,ko05418,map04621,map05418	ko00000,ko00001,ko03110	Belongs to the thioredoxin family
PLIICNAG_00687	3.3e-64	mscL	-	-	M	ko:K03282	-	ko00000,ko02000	Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
PLIICNAG_00688	3.63e-91	yslB	-	-	S	-	-	-	Protein of unknown function (DUF2507)
PLIICNAG_00689	3.98e-188	murI	3.6.1.66, 5.1.1.3	-	M	ko:K01776,ko:K02428	ko00230,ko00471,ko01100,map00230,map00471,map01100	ko00000,ko00001,ko01000,ko01011	Provides the (R)-glutamate required for cell wall biosynthesis
PLIICNAG_00690	2.16e-148	rdgB	3.6.1.66	-	F	ko:K02428	ko00230,map00230	ko00000,ko00001,ko01000	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
PLIICNAG_00691	1.05e-191	ykuT	-	-	M	ko:K16052,ko:K22044	-	ko00000,ko02000	mechanosensitive ion channel
PLIICNAG_00692	3.11e-28	ytxG	-	-	S	-	-	-	protein containing a divergent version of the methyl-accepting chemotaxis-like domain
PLIICNAG_00693	3.09e-69	-	-	-	-	-	-	-	-
PLIICNAG_00694	2.37e-274	pepQ	3.4.13.9	-	E	ko:K01271	-	ko00000,ko01000,ko01002	Creatinase/Prolidase N-terminal domain
PLIICNAG_00695	6.84e-229	ccpA	-	-	K	ko:K02529	-	ko00000,ko03000	catabolite control protein A
PLIICNAG_00696	0.0	-	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	glycerophosphoryl diester phosphodiesterase
PLIICNAG_00697	2.42e-74	-	-	-	-	-	-	-	-
PLIICNAG_00698	0.0	sasH	3.1.3.5, 3.1.3.6, 3.1.4.16, 3.6.1.45	-	F	ko:K01081,ko:K01119,ko:K07004,ko:K08693,ko:K11751	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the 5'-nucleotidase family
PLIICNAG_00699	3.11e-128	yutD	-	-	S	-	-	-	Protein of unknown function (DUF1027)
PLIICNAG_00700	1.24e-187	nagD	3.1.3.41	-	G	ko:K01101	ko00627,ko01120,map00627,map01120	ko00000,ko00001,ko01000	Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
PLIICNAG_00701	5.73e-117	-	-	-	S	-	-	-	Protein of unknown function (DUF1461)
PLIICNAG_00702	4.16e-151	dedA	-	-	S	ko:K03975	-	ko00000	SNARE-like domain protein
PLIICNAG_00703	2.62e-193	yumC	1.18.1.2, 1.19.1.1	-	C	ko:K21567	-	ko00000,ko01000	Ferredoxin--NADP reductase
PLIICNAG_00704	2.69e-167	-	-	-	S	-	-	-	Phage Mu protein F like protein
PLIICNAG_00705	3.62e-22	ytgB	-	-	S	-	-	-	Transglycosylase associated protein
PLIICNAG_00706	1.41e-159	tnp1216	-	-	L	ko:K07498	-	ko00000	DDE domain
PLIICNAG_00707	2.25e-72	pinR1	-	-	L	-	-	-	Helix-turn-helix domain of Hin and related proteins, a family of DNA-binding domains unique to bacteria and represented by the Hin protein of Salmonella. The basic HTH domain is a simple fold comprised of three core helices that form a right-handed
PLIICNAG_00708	5.19e-113	-	-	-	L	-	-	-	Transposase DDE domain
PLIICNAG_00711	2.08e-202	-	-	-	K	-	-	-	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
PLIICNAG_00712	2.71e-211	-	2.7.7.7	-	L	ko:K02342	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	EXOIII
PLIICNAG_00713	2.53e-204	endA	-	-	F	ko:K15051	-	ko00000	DNA RNA non-specific endonuclease
PLIICNAG_00714	0.0	pepD1	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
PLIICNAG_00715	7.73e-256	malK	-	-	P	ko:K10112,ko:K17240	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ATPases associated with a variety of cellular activities
PLIICNAG_00716	3.85e-201	-	-	-	P	ko:K02025	-	ko00000,ko00002,ko02000	ABC-type sugar transport systems, permease components
PLIICNAG_00717	5.62e-187	-	-	-	P	ko:K02026	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PLIICNAG_00718	0.0	-	-	-	S	-	-	-	Zn-dependent metallo-hydrolase RNA specificity domain
PLIICNAG_00719	1.17e-307	-	-	-	G	ko:K02027	-	ko00000,ko00002,ko02000	Bacterial extracellular solute-binding protein
PLIICNAG_00720	1.36e-214	corA	-	-	P	ko:K03284	-	ko00000,ko02000	CorA-like Mg2+ transporter protein
PLIICNAG_00721	5.66e-208	-	3.5.2.6	-	V	ko:K17836	ko00311,ko01130,ko01501,map00311,map01130,map01501	ko00000,ko00001,ko00002,ko01000,ko01504	Beta-lactamase enzyme family
PLIICNAG_00722	5.77e-127	yobS	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PLIICNAG_00723	0.0	ydgH	-	-	S	ko:K06994	-	ko00000	MMPL family
PLIICNAG_00724	3.12e-203	-	-	-	-	-	-	-	-
PLIICNAG_00725	0.0	gabD	1.2.1.16, 1.2.1.20, 1.2.1.79	-	C	ko:K00135	ko00250,ko00310,ko00350,ko00650,ko00760,ko01100,ko01120,map00250,map00310,map00350,map00650,map00760,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Belongs to the aldehyde dehydrogenase family
PLIICNAG_00726	6.86e-163	plcR	-	-	K	ko:K20480	ko02024,map02024	ko00000,ko00001,ko03000	Helix-turn-helix
PLIICNAG_00727	4.19e-198	-	-	-	I	-	-	-	alpha/beta hydrolase fold
PLIICNAG_00728	4.53e-139	-	-	-	S	-	-	-	SNARE associated Golgi protein
PLIICNAG_00729	1.13e-125	yjcK	2.3.1.128	-	J	ko:K03790	-	ko00000,ko01000,ko03009	Acetyltransferase (GNAT) domain
PLIICNAG_00730	0.0	serS	6.1.1.11	-	J	ko:K01875	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
PLIICNAG_00731	1.17e-29	repA	-	-	S	-	-	-	Replication initiator protein A
PLIICNAG_00732	4.4e-288	cca	2.7.7.72	-	J	ko:K00974	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
PLIICNAG_00733	8.42e-204	XK27_10395	-	-	S	-	-	-	Uncharacterised 5xTM membrane BCR, YitT family COG1284
PLIICNAG_00734	3.68e-295	XK27_05225	-	-	S	-	-	-	Tetratricopeptide repeat protein
PLIICNAG_00735	1.17e-56	hup	-	-	L	ko:K03530	-	ko00000,ko03032,ko03036,ko03400	Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
PLIICNAG_00736	1.82e-312	der	-	-	S	ko:K03977	-	ko00000,ko03009	GTPase that plays an essential role in the late steps of ribosome biogenesis
PLIICNAG_00737	6.32e-274	rpsA	-	-	J	ko:K02945	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein S1
PLIICNAG_00738	2.57e-149	cmk	2.7.4.25	-	F	ko:K00945	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the cytidylate kinase family. Type 1 subfamily
PLIICNAG_00739	3.4e-56	-	-	-	M	-	-	-	Lysin motif
PLIICNAG_00740	1.31e-149	ribU	-	-	U	-	-	-	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
PLIICNAG_00741	3.66e-165	rluB	5.4.99.22	-	J	ko:K06178	-	ko00000,ko01000,ko03009	Belongs to the pseudouridine synthase RsuA family
PLIICNAG_00742	1.16e-134	scpB	-	-	D	ko:K06024	-	ko00000,ko03036	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
PLIICNAG_00743	1.22e-167	scpA	-	-	D	ko:K05896	-	ko00000,ko03036	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
PLIICNAG_00744	1.62e-80	ribT	-	-	K	ko:K02859	-	ko00000	COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PLIICNAG_00745	1.48e-216	xerD	-	-	D	ko:K04763	-	ko00000,ko03036	recombinase XerD
PLIICNAG_00746	1.26e-215	yitL	-	-	S	ko:K00243	-	ko00000	S1 domain
PLIICNAG_00747	0.0	pyk	2.7.1.40	-	G	ko:K00873	ko00010,ko00230,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko04930,ko05165,ko05203,ko05230,map00010,map00230,map00620,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map04930,map05165,map05203,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Belongs to the pyruvate kinase family
PLIICNAG_00748	6.65e-234	pfkA	2.7.1.11	-	F	ko:K00850	ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04152,ko05230,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04152,map05230	ko00000,ko00001,ko00002,ko01000,ko01009,ko03019	Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
PLIICNAG_00749	0.0	dnaE	2.7.7.7	-	L	ko:K02337	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase
PLIICNAG_00750	9.47e-43	-	-	-	S	-	-	-	Protein of unknown function (DUF2929)
PLIICNAG_00751	0.0	yfkN	3.1.3.6, 3.1.4.16	-	F	ko:K01119	ko00230,ko00240,map00230,map00240	ko00000,ko00001,ko01000	Belongs to the 5'-nucleotidase family
PLIICNAG_00752	3.62e-38	rpmF	-	-	J	ko:K02911	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Belongs to the bacterial ribosomal protein bL32 family
PLIICNAG_00753	6.62e-48	-	-	-	S	-	-	-	Lipopolysaccharide assembly protein A domain
PLIICNAG_00754	7.14e-185	-	-	-	S	ko:K07124	-	ko00000	Belongs to the short-chain dehydrogenases reductases (SDR) family
PLIICNAG_00755	3.02e-226	rnz	3.1.26.11	-	J	ko:K00784	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
PLIICNAG_00756	0.0	oatA	-	-	I	-	-	-	Acyltransferase
PLIICNAG_00757	1.55e-308	obg	-	-	S	ko:K03979	-	ko00000,ko01000,ko03009	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
PLIICNAG_00758	0.0	uvrC	-	-	L	ko:K03703	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
PLIICNAG_00759	3.25e-49	-	-	-	S	-	-	-	Uncharacterised protein family (UPF0236)
PLIICNAG_00760	3.66e-133	-	-	-	E	-	-	-	amino acid
PLIICNAG_00761	9.08e-20	puuD	-	-	S	ko:K07010	-	ko00000,ko01002	peptidase C26
PLIICNAG_00762	4.14e-311	yifK	-	-	E	ko:K03293	-	ko00000	Amino acid permease
PLIICNAG_00763	2.19e-300	aapA	-	-	E	ko:K03293,ko:K11737	-	ko00000,ko02000	Amino acid permease
PLIICNAG_00764	8.44e-163	-	-	-	-	-	-	-	-
PLIICNAG_00765	3.58e-155	sipS3	3.4.21.89	-	U	ko:K03100	ko02024,ko03060,map02024,map03060	ko00000,ko00001,ko01000,ko01002	Belongs to the peptidase S26 family
PLIICNAG_00766	0.0	clpE	-	-	O	ko:K03697,ko:K04086	-	ko00000,ko03110	AAA domain (Cdc48 subfamily)
PLIICNAG_00767	7.98e-200	-	-	-	S	-	-	-	Alpha/beta hydrolase of unknown function (DUF915)
PLIICNAG_00768	3.37e-274	pts13C	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PLIICNAG_00769	3.11e-161	-	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PLIICNAG_00770	1.54e-138	ylbB	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter permease
PLIICNAG_00771	1.9e-237	ylbB	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter permease
PLIICNAG_00772	8e-49	-	-	-	-	-	-	-	-
PLIICNAG_00773	0.0	ytgP	-	-	S	ko:K03328	-	ko00000	Polysaccharide biosynthesis protein
PLIICNAG_00774	5.62e-193	lysA2	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
PLIICNAG_00775	3.54e-156	-	-	-	S	-	-	-	Protein of unknown function (DUF975)
PLIICNAG_00776	2.81e-22	-	-	-	-	-	-	-	-
PLIICNAG_00777	5.79e-65	-	-	-	-	-	-	-	-
PLIICNAG_00778	6.93e-39	-	-	-	-	-	-	-	-
PLIICNAG_00779	1.49e-158	-	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
PLIICNAG_00782	7.96e-223	pbpX2	-	-	V	-	-	-	Beta-lactamase
PLIICNAG_00783	2.58e-313	dltD	-	-	M	ko:K03740	ko01503,ko02020,ko05150,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01504	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
PLIICNAG_00784	2.46e-48	dltC	6.1.1.13	-	J	ko:K14188	ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01000,ko01504	Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PLIICNAG_00785	5.79e-311	dltB	-	-	M	ko:K03739	ko01503,ko02020,ko05150,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01504	MBOAT, membrane-bound O-acyltransferase family
PLIICNAG_00786	0.0	dltA	6.1.1.13	-	H	ko:K03367	ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01000,ko01504	Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PLIICNAG_00787	6.46e-27	-	-	-	S	-	-	-	D-Ala-teichoic acid biosynthesis protein
PLIICNAG_00788	2e-67	-	-	-	-	-	-	-	-
PLIICNAG_00789	2.11e-273	-	-	-	S	-	-	-	Membrane
PLIICNAG_00790	8.78e-33	ykuL	-	-	S	-	-	-	IMP dehydrogenase activity
PLIICNAG_00791	5.78e-50	-	-	-	S	ko:K19157	-	ko00000,ko01000,ko02048	Bacterial toxin of type II toxin-antitoxin system, YafQ
PLIICNAG_00795	6.36e-161	thiN	2.7.6.2	-	H	ko:K00949	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000	thiamine pyrophosphokinase
PLIICNAG_00796	4.86e-150	rpe	5.1.3.1	-	G	ko:K01783	ko00030,ko00040,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the ribulose-phosphate 3-epimerase family
PLIICNAG_00797	2.32e-98	rsgA	3.1.3.100	-	S	ko:K06949	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000,ko03009	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
PLIICNAG_00798	1.25e-62	rsgA	3.1.3.100	-	S	ko:K06949	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000,ko03009	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
PLIICNAG_00799	0.0	prkC	2.7.11.1	-	KLT	ko:K08884,ko:K12132	-	ko00000,ko01000,ko01001	serine threonine protein kinase
PLIICNAG_00800	4.69e-189	stp	3.1.3.16	-	T	ko:K20074	-	ko00000,ko01000,ko01009	phosphatase
PLIICNAG_00801	3.5e-312	sun	2.1.1.176	-	J	ko:K03500	-	ko00000,ko01000,ko03009	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
PLIICNAG_00802	5.58e-221	fmt	2.1.2.9	-	J	ko:K00604	ko00670,ko00970,map00670,map00970	ko00000,ko00001,ko01000	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
PLIICNAG_00803	0.0	priA	-	-	L	ko:K04066	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
PLIICNAG_00804	5.6e-45	rpoZ	2.7.7.6	-	K	ko:K03060	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
PLIICNAG_00805	6.69e-142	gmk	2.7.4.8	-	F	ko:K00942	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko00002,ko01000	Essential for recycling GMP and indirectly, cGMP
PLIICNAG_00806	4.77e-100	-	-	-	S	-	-	-	ASCH
PLIICNAG_00807	0.0	recN	-	-	L	ko:K03631	-	ko00000,ko03400	May be involved in recombinational repair of damaged DNA
PLIICNAG_00808	8.09e-194	rrmJ	2.1.1.226, 2.1.1.227	-	J	ko:K06442	-	ko00000,ko01000,ko03009	Ribosomal RNA large subunit methyltransferase J
PLIICNAG_00809	1.45e-201	ispA	2.5.1.1, 2.5.1.10, 2.5.1.29	-	H	ko:K13789	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko01006	Belongs to the FPP GGPP synthase family
PLIICNAG_00810	4.4e-47	xseB	3.1.11.6	-	L	ko:K03602	ko03430,map03430	ko00000,ko00001,ko01000,ko03400	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PLIICNAG_00811	5.59e-251	xseA	3.1.11.6	-	L	ko:K03601	ko03430,map03430	ko00000,ko00001,ko01000,ko03400	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PLIICNAG_00812	1.83e-196	folD	1.5.1.5, 3.5.4.9	-	F	ko:K01491	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
PLIICNAG_00813	5.2e-85	nusB	-	-	K	ko:K03625	-	ko00000,ko03009,ko03021	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
PLIICNAG_00814	1.89e-90	WQ51_04310	-	-	S	ko:K10947	-	ko00000,ko03000	Asp23 family, cell envelope-related function
PLIICNAG_00815	1e-131	efp	-	-	J	ko:K02356	-	ko00000,ko03012	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
PLIICNAG_00816	1.64e-261	pepP	3.4.11.9, 3.4.13.9	-	E	ko:K01262,ko:K01271	-	ko00000,ko01000,ko01002	Creatinase/Prolidase N-terminal domain
PLIICNAG_00817	5.95e-64	rpmA	-	-	J	ko:K02899	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL27 family
PLIICNAG_00818	6.82e-66	rplU	-	-	J	ko:K02888	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein binds to 23S rRNA in the presence of protein L20
PLIICNAG_00819	0.0	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2325)
PLIICNAG_00820	4.64e-256	ilvE	2.6.1.42	-	E	ko:K00826	ko00270,ko00280,ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00270,map00280,map00290,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Branched-chain amino acid aminotransferase
PLIICNAG_00821	2.32e-166	-	-	-	S	-	-	-	Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
PLIICNAG_00822	4.18e-38	dmpI	5.3.2.6	-	G	ko:K01821	ko00362,ko00621,ko00622,ko01100,ko01120,ko01220,map00362,map00621,map00622,map01100,map01120,map01220	ko00000,ko00001,ko00002,ko01000	Belongs to the 4-oxalocrotonate tautomerase family
PLIICNAG_00823	0.0	-	-	-	S	-	-	-	Predicted membrane protein (DUF2207)
PLIICNAG_00824	1.15e-267	-	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
PLIICNAG_00826	8.58e-290	pbuG	-	-	S	ko:K06901	-	ko00000,ko02000	permease
PLIICNAG_00827	4.12e-47	-	-	-	-	-	-	-	-
PLIICNAG_00828	2.02e-101	atkY	-	-	K	ko:K02171	ko01501,map01501	ko00000,ko00001,ko00002,ko01504,ko03000	Penicillinase repressor
PLIICNAG_00829	2.08e-84	-	-	-	S	-	-	-	Cupredoxin-like domain
PLIICNAG_00830	1.81e-64	-	-	-	S	-	-	-	Cupredoxin-like domain
PLIICNAG_00831	0.0	copA	3.6.3.3, 3.6.3.4, 3.6.3.5, 3.6.3.54	-	P	ko:K01533,ko:K01534,ko:K17686	ko01524,ko04016,map01524,map04016	ko00000,ko00001,ko01000	P-type ATPase
PLIICNAG_00832	4.08e-21	-	-	-	EGP	ko:K08368	-	ko00000,ko02000	Sugar (and other) transporter
PLIICNAG_00833	5.89e-48	-	-	-	EGP	ko:K08368	-	ko00000,ko02000	Sugar (and other) transporter
PLIICNAG_00834	4.61e-99	-	-	-	EGP	ko:K08368	-	ko00000,ko02000	Sugar (and other) transporter
PLIICNAG_00835	6.46e-27	-	-	-	-	-	-	-	-
PLIICNAG_00836	6.76e-269	-	-	-	-	-	-	-	-
PLIICNAG_00837	0.0	eriC	-	-	P	ko:K03281	-	ko00000	chloride
PLIICNAG_00838	0.0	gnd	1.1.1.343, 1.1.1.44	-	H	ko:K00033	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
PLIICNAG_00839	0.0	gidA	-	-	D	ko:K03495	-	ko00000,ko03016,ko03036	NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
PLIICNAG_00840	0.0	mnmE	-	-	S	ko:K03650	-	ko00000,ko01000,ko03016	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
PLIICNAG_00841	5.34e-189	yidC	-	-	U	ko:K03217	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044,ko03029	Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PLIICNAG_00842	1.31e-81	rnpA	3.1.26.5	-	J	ko:K03536	-	ko00000,ko01000,ko03016	RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
PLIICNAG_00843	3.26e-23	rpmH	-	-	J	ko:K02914	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL34 family
PLIICNAG_00844	0.0	dnaA	-	-	L	ko:K02313	ko02020,ko04112,map02020,map04112	ko00000,ko00001,ko03032,ko03036	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
PLIICNAG_00845	4.3e-256	dnaN	2.7.7.7	-	L	ko:K02338	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
PLIICNAG_00846	4.08e-47	yaaA	-	-	S	ko:K14761	-	ko00000,ko03009	S4 domain protein YaaA
PLIICNAG_00847	2.09e-267	recF	-	-	L	ko:K03629	ko03440,map03440	ko00000,ko00001,ko03400	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
PLIICNAG_00848	0.0	gyrB	5.99.1.3	-	L	ko:K02470	-	ko00000,ko01000,ko03032,ko03400	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PLIICNAG_00849	0.0	gyrA	5.99.1.3	-	L	ko:K02469	-	ko00000,ko01000,ko03032,ko03400	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PLIICNAG_00850	1.93e-65	rpsF	-	-	J	ko:K02990	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Binds together with S18 to 16S ribosomal RNA
PLIICNAG_00851	7.17e-110	ssb	-	-	L	ko:K03111	ko03030,ko03430,ko03440,map03030,map03430,map03440	ko00000,ko00001,ko03029,ko03032,ko03400	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
PLIICNAG_00852	1.89e-47	rpsR	-	-	J	ko:K02963	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
PLIICNAG_00853	1.54e-37	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
PLIICNAG_00854	3.72e-35	frnE	5.3.4.1	-	Q	ko:K01829	-	ko00000,ko01000	DSBA-like thioredoxin domain
PLIICNAG_00855	1.2e-48	frnE	5.3.4.1	-	Q	ko:K01829	-	ko00000,ko01000	DSBA-like thioredoxin domain
PLIICNAG_00856	7.66e-222	trxB	1.8.1.9	-	C	ko:K00384	ko00450,map00450	ko00000,ko00001,ko01000	Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
PLIICNAG_00857	2.51e-152	-	-	-	K	-	-	-	Rhodanese Homology Domain
PLIICNAG_00858	2.66e-48	-	-	-	CO	ko:K03671	ko04621,ko05418,map04621,map05418	ko00000,ko00001,ko03110	Thioredoxin
PLIICNAG_00859	1.92e-28	-	-	-	-	-	-	-	-
PLIICNAG_00860	8.77e-42	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
PLIICNAG_00861	1.57e-22	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
PLIICNAG_00862	8.59e-85	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
PLIICNAG_00863	2.49e-87	prtB	3.4.21.96	-	O	ko:K01361	-	ko00000,ko01000,ko01002,ko03110	Belongs to the peptidase S8 family
PLIICNAG_00864	2.12e-110	prtB	3.4.21.96	-	O	ko:K01361	-	ko00000,ko01000,ko01002,ko03110	Belongs to the peptidase S8 family
PLIICNAG_00865	4.04e-267	prtB	3.4.21.96	-	O	ko:K01361	-	ko00000,ko01000,ko01002,ko03110	Belongs to the peptidase S8 family
PLIICNAG_00866	8.9e-66	-	-	-	-	-	-	-	-
PLIICNAG_00867	3.47e-73	dhaM	2.7.1.121	-	S	ko:K05881	ko00561,map00561	ko00000,ko00001,ko01000,ko02000	PTS system fructose IIA component
PLIICNAG_00868	1.89e-118	dhaL	2.7.1.121	-	S	ko:K05879	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Dak2
PLIICNAG_00869	4.49e-233	dhaK	2.7.1.121	-	G	ko:K05878	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Dak1 domain
PLIICNAG_00870	0.0	ytgP	-	-	S	ko:K03328	-	ko00000	Polysaccharide biosynthesis protein
PLIICNAG_00871	0.0	leuS	6.1.1.4	-	J	ko:K01869	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Belongs to the class-I aminoacyl-tRNA synthetase family
PLIICNAG_00872	2.55e-153	yodM	3.6.1.27	-	I	ko:K19302	ko00550,map00550	ko00000,ko00001,ko01000,ko01011	Acid phosphatase homologues
PLIICNAG_00873	2.67e-189	hepT	2.5.1.30	-	H	ko:K00805	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	Belongs to the FPP GGPP synthase family
PLIICNAG_00874	0.0	mdr	-	-	EGP	-	-	-	Major Facilitator
PLIICNAG_00875	4.32e-279	metK	2.5.1.6	-	H	ko:K00789	ko00270,ko01100,ko01110,ko01230,map00270,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
PLIICNAG_00878	2.76e-214	-	-	-	P	ko:K02077	-	ko00000,ko00002,ko02000	Belongs to the bacterial solute-binding protein 9 family
PLIICNAG_00880	9.66e-110	-	-	-	S	ko:K19055	-	ko00000,ko01000,ko03016	Aminoacyl-tRNA editing domain
PLIICNAG_00881	1.17e-202	yidC	-	-	U	ko:K03217	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044,ko03029	Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PLIICNAG_00882	3.93e-59	acyP	3.6.1.7	-	C	ko:K01512	ko00620,ko00627,ko01120,map00620,map00627,map01120	ko00000,ko00001,ko01000	Belongs to the acylphosphatase family
PLIICNAG_00883	2.04e-175	spoU	-	-	J	ko:K03437	-	ko00000,ko03016	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PLIICNAG_00884	1.4e-80	yodB	-	-	K	-	-	-	Transcriptional regulator, HxlR family
PLIICNAG_00885	9.05e-258	pheS	6.1.1.20	-	J	ko:K01889	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
PLIICNAG_00886	0.0	pheT	6.1.1.20	-	J	ko:K01890	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PLIICNAG_00887	2.25e-88	greA	-	-	K	ko:K03624	-	ko00000,ko03021	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PLIICNAG_00888	1.79e-214	ldh3	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	lactate/malate dehydrogenase, alpha/beta C-terminal domain
PLIICNAG_00889	5.22e-36	-	-	-	S	-	-	-	Phage derived protein Gp49-like (DUF891)
PLIICNAG_00890	1.67e-51	-	-	-	K	-	-	-	Helix-turn-helix domain
PLIICNAG_00891	5.79e-217	-	-	-	G	-	-	-	BadF/BadG/BcrA/BcrD ATPase family
PLIICNAG_00892	0.0	-	-	-	S	-	-	-	membrane
PLIICNAG_00893	0.0	pbp2b	-	-	M	ko:K00687,ko:K12553,ko:K21465,ko:K21466	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01011	Penicillin-binding Protein
PLIICNAG_00894	6.25e-29	rpmG	-	-	J	ko:K02913	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL33 family
PLIICNAG_00895	3.12e-129	fthC	6.3.3.2	-	H	ko:K01934	ko00670,ko01100,map00670,map01100	ko00000,ko00001,ko01000	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
PLIICNAG_00896	4.44e-151	gluP	3.4.21.105	-	S	ko:K19225	-	ko00000,ko01000,ko01002	Rhomboid family
PLIICNAG_00897	2.45e-44	yqgQ	-	-	S	-	-	-	Bacterial protein of unknown function (DUF910)
PLIICNAG_00898	3.1e-92	yqhL	-	-	P	-	-	-	Rhodanese-like protein
PLIICNAG_00899	9.65e-220	miaA	2.5.1.75	-	F	ko:K00791	ko00908,ko01100,ko01110,map00908,map01100,map01110	ko00000,ko00001,ko01000,ko01006,ko03016	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
PLIICNAG_00900	1.5e-36	ynbB	-	-	P	-	-	-	aluminum resistance
PLIICNAG_00901	5.17e-117	ynbB	-	-	P	-	-	-	aluminum resistance
PLIICNAG_00902	6.44e-84	ynbB	-	-	P	-	-	-	aluminum resistance
PLIICNAG_00903	0.0	glnA	6.3.1.2	-	E	ko:K01915	ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727	ko00000,ko00001,ko01000,ko04147	glutamine synthetase
PLIICNAG_00904	8.93e-173	-	-	-	-	-	-	-	-
PLIICNAG_00905	1.59e-211	-	-	-	-	-	-	-	-
PLIICNAG_00906	6.91e-203	-	-	-	-	-	-	-	-
PLIICNAG_00907	3.7e-58	-	-	-	K	-	-	-	helix_turn_helix, arabinose operon control protein
PLIICNAG_00908	1.05e-123	-	-	-	K	-	-	-	helix_turn_helix, arabinose operon control protein
PLIICNAG_00909	1.16e-163	sacA	3.2.1.26	GH32	G	ko:K01193	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	invertase
PLIICNAG_00910	9.72e-270	scrA5	2.7.1.211	-	G	ko:K02808,ko:K02809,ko:K02810	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
PLIICNAG_00911	3.02e-17	scrA5	2.7.1.211	-	G	ko:K02808,ko:K02809,ko:K02810	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
PLIICNAG_00912	2.35e-119	melA	3.2.1.22	-	G	ko:K07407	ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603	ko00000,ko00001,ko01000	alpha-galactosidase
PLIICNAG_00913	9.85e-78	melA	3.2.1.22	-	G	ko:K07407	ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603	ko00000,ko00001,ko01000	alpha-galactosidase
PLIICNAG_00914	3.06e-238	manL	2.7.1.191	-	G	ko:K02793,ko:K02794	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system sorbose subfamily IIB component
PLIICNAG_00915	5.16e-181	manY	-	-	G	ko:K02746,ko:K02795	ko00051,ko00052,ko00520,ko01100,ko02060,map00051,map00052,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	PTS system
PLIICNAG_00916	3.51e-222	manN	-	-	G	ko:K02796	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	system, mannose fructose sorbose family IID component
PLIICNAG_00917	2.76e-83	-	-	-	S	-	-	-	Domain of unknown function (DUF956)
PLIICNAG_00918	2.22e-133	-	-	-	K	-	-	-	Transcriptional regulator
PLIICNAG_00919	4.77e-29	-	-	-	K	-	-	-	Transcriptional regulator
PLIICNAG_00920	3.09e-107	-	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	transferase hexapeptide repeat
PLIICNAG_00921	8.91e-306	cycA	-	-	E	ko:K03293,ko:K11737	-	ko00000,ko02000	Amino acid permease
PLIICNAG_00922	0.0	adhE	1.1.1.1, 1.2.1.10	-	C	ko:K04072	ko00010,ko00071,ko00350,ko00620,ko00625,ko00626,ko00650,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00620,map00625,map00626,map00650,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	belongs to the iron- containing alcohol dehydrogenase family
PLIICNAG_00923	0.0	glmS	2.6.1.16	-	M	ko:K00820	ko00250,ko00520,ko01100,ko01130,ko04931,map00250,map00520,map01100,map01130,map04931	ko00000,ko00001,ko01000,ko01002	Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
PLIICNAG_00924	7.04e-63	-	-	-	-	-	-	-	-
PLIICNAG_00925	4.01e-134	-	-	-	E	-	-	-	amino acid
PLIICNAG_00926	1.57e-94	-	-	-	-	-	-	-	-
PLIICNAG_00927	1.68e-117	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
PLIICNAG_00928	3.7e-105	-	-	-	S	-	-	-	LPXTG cell wall anchor motif
PLIICNAG_00929	6.43e-283	ackA	2.7.2.1	-	F	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PLIICNAG_00930	4.44e-170	-	4.1.1.44	-	S	ko:K01607	ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220	ko00000,ko00001,ko01000	Carboxymuconolactone decarboxylase family
PLIICNAG_00931	1.85e-48	-	-	-	-	-	-	-	-
PLIICNAG_00932	7.52e-95	apfA	3.6.1.61	-	F	ko:K18445	ko00230,map00230	ko00000,ko00001,ko01000	Nudix hydrolase
PLIICNAG_00933	7.28e-267	-	-	-	EP	-	-	-	Plasmid replication protein
PLIICNAG_00934	6.69e-66	-	-	-	-	-	-	-	-
PLIICNAG_00935	1.48e-231	-	-	-	D	-	-	-	COG1674 DNA segregation ATPase FtsK SpoIIIE and related proteins
PLIICNAG_00936	2.76e-47	-	-	-	-	-	-	-	-
PLIICNAG_00938	0.0	yeeA	-	-	V	-	-	-	Type II restriction enzyme, methylase subunits
PLIICNAG_00939	3.12e-53	-	-	-	C	-	-	-	Domain of unknown function (DUF4145)
PLIICNAG_00941	2.17e-61	yhaH	-	-	S	-	-	-	Protein of unknown function (DUF805)
PLIICNAG_00942	1.07e-136	-	3.5.1.124	-	S	ko:K03152	-	ko00000,ko01000,ko01002	DJ-1/PfpI family
PLIICNAG_00943	6.56e-145	-	3.8.1.2	-	S	ko:K01560	ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120	ko00000,ko00001,ko01000	Haloacid dehalogenase-like hydrolase
PLIICNAG_00944	2.57e-172	-	-	-	S	ko:K07090	-	ko00000	membrane transporter protein
PLIICNAG_00945	1.9e-161	-	-	-	G	-	-	-	Belongs to the phosphoglycerate mutase family
PLIICNAG_00946	5.3e-209	-	-	-	P	ko:K16264	-	ko00000,ko02000	cation diffusion facilitator family transporter
PLIICNAG_00947	4.73e-31	-	-	-	-	-	-	-	-
PLIICNAG_00948	3.29e-162	gpmA1	5.4.2.11	-	G	ko:K01834	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PLIICNAG_00949	3.29e-234	-	-	-	S	-	-	-	AAA domain
PLIICNAG_00950	2.86e-132	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
PLIICNAG_00951	2.21e-144	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
PLIICNAG_00952	0.0	mgtA	3.6.3.2	-	P	ko:K01531	-	ko00000,ko01000	COG0474 Cation transport ATPase
PLIICNAG_00953	6.47e-14	-	-	-	-	-	-	-	-
PLIICNAG_00954	4.42e-187	-	-	-	U	ko:K05340	-	ko00000,ko02000	sugar transport
PLIICNAG_00955	0.0	pepC	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	Peptidase C1-like family
PLIICNAG_00956	1.49e-15	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
PLIICNAG_00957	8.97e-170	glnQ	-	-	E	ko:K10041	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
PLIICNAG_00958	9.06e-192	glnH	-	-	ET	ko:K10039	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
PLIICNAG_00959	3.66e-139	glnM	-	-	P	ko:K10040	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
PLIICNAG_00960	1.66e-137	glnP	-	-	P	ko:K10040	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
PLIICNAG_00961	2.71e-192	-	-	-	S	-	-	-	Protein of unknown function (DUF2974)
PLIICNAG_00962	1.71e-166	-	-	-	K	-	-	-	sequence-specific DNA binding
PLIICNAG_00963	9.52e-211	-	-	-	S	-	-	-	SLAP domain
PLIICNAG_00964	1.77e-72	-	-	-	S	-	-	-	Bacteriocin helveticin-J
PLIICNAG_00965	2.37e-307	srrA1	-	-	G	ko:K02027,ko:K17244	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding protein
PLIICNAG_00966	8.52e-208	-	-	-	C	-	-	-	Domain of unknown function (DUF4931)
PLIICNAG_00967	8.52e-215	rbsK	2.7.1.15	-	H	ko:K00852	ko00030,map00030	ko00000,ko00001,ko01000	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PLIICNAG_00968	3.83e-163	rpiA	5.3.1.6	-	G	ko:K01807	ko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
PLIICNAG_00969	0.0	kup	-	-	P	ko:K03549	-	ko00000,ko02000	Transport of potassium into the cell
PLIICNAG_00970	3.01e-224	rihC	3.2.2.1	-	F	ko:K01239,ko:K01250,ko:K12700	ko00230,ko00760,ko01100,map00230,map00760,map01100	ko00000,ko00001,ko01000	Nucleoside
PLIICNAG_00971	1.06e-170	gntR	-	-	K	-	-	-	UbiC transcription regulator-associated domain protein
PLIICNAG_00973	1.7e-78	-	2.3.1.81	-	V	ko:K00662	-	ko00000,ko01000,ko01504	Aminoglycoside 3-N-acetyltransferase
PLIICNAG_00974	7.3e-82	-	2.3.1.81	-	V	ko:K00662	-	ko00000,ko01000,ko01504	Aminoglycoside 3-N-acetyltransferase
PLIICNAG_00975	4.18e-197	-	3.1.3.102, 3.1.3.104	-	S	ko:K20861	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	hydrolase
PLIICNAG_00976	6.61e-266	-	-	-	EGP	-	-	-	Major facilitator Superfamily
PLIICNAG_00977	2.28e-149	ywdE	-	-	K	ko:K20375	ko02024,map02024	ko00000,ko00001,ko03000	Transcriptional regulator
PLIICNAG_00978	2.93e-109	-	3.6.3.44	-	V	ko:K02021,ko:K06147,ko:K18104	ko01501,ko02010,map01501,map02010	ko00000,ko00001,ko00002,ko01000,ko01504,ko02000	ABC transporter transmembrane region
PLIICNAG_00980	4.22e-236	lysC	2.7.2.4	-	E	ko:K00928	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the aspartokinase family
PLIICNAG_00981	5.79e-311	thrC	4.2.3.1	-	E	ko:K01733	ko00260,ko00750,ko01100,ko01110,ko01120,ko01230,map00260,map00750,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Threonine synthase
PLIICNAG_00982	6.86e-154	hom	1.1.1.3	-	E	ko:K00003	ko00260,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00270,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	homoserine dehydrogenase
PLIICNAG_00983	3.13e-141	thrB	2.7.1.39	-	F	ko:K00872	ko00260,ko01100,ko01110,ko01120,ko01230,map00260,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
PLIICNAG_00984	1.95e-137	-	-	-	-	-	-	-	-
PLIICNAG_00985	1.78e-208	yitT	-	-	S	-	-	-	Uncharacterised 5xTM membrane BCR, YitT family COG1284
PLIICNAG_00986	3.85e-52	-	-	-	S	-	-	-	Peptidase family M23
PLIICNAG_00987	1.34e-196	yqfL	2.7.11.33, 2.7.4.28	-	F	ko:K09773	-	ko00000,ko01000	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
PLIICNAG_00988	4.83e-30	rpsU	-	-	J	ko:K02970	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bS21 family
PLIICNAG_00989	5.12e-91	yqeY	-	-	S	ko:K09117	-	ko00000	YqeY-like protein
PLIICNAG_00990	7.92e-221	phoH	-	-	T	ko:K06217	-	ko00000	phosphate starvation-inducible protein PhoH
PLIICNAG_00991	1.03e-128	ybeY	-	-	S	ko:K07042	-	ko00000,ko03009	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
PLIICNAG_00992	7.03e-215	era	-	-	S	ko:K03595	-	ko00000,ko03009,ko03029	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
PLIICNAG_00993	2.79e-175	recO	-	-	L	ko:K03584	ko03440,map03440	ko00000,ko00001,ko03400	Involved in DNA repair and RecF pathway recombination
PLIICNAG_00994	2.22e-229	glyQ	6.1.1.14	-	J	ko:K01878	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	glycyl-tRNA synthetase alpha subunit
PLIICNAG_00995	0.0	glyS	6.1.1.14	-	J	ko:K01879	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Glycyl-tRNA synthetase beta subunit
PLIICNAG_00996	0.0	dnaG	-	-	L	ko:K02316	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
PLIICNAG_00997	2.88e-251	sigA	-	-	K	ko:K03086	-	ko00000,ko03021	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
PLIICNAG_00998	3.44e-160	-	-	-	S	-	-	-	Peptidase family M23
PLIICNAG_00999	4.56e-89	-	3.6.1.55	-	F	ko:K03574	-	ko00000,ko01000,ko03400	NUDIX domain
PLIICNAG_01000	4.16e-148	trmK	2.1.1.217	-	S	ko:K06967	-	ko00000,ko01000,ko03016	SAM-dependent methyltransferase
PLIICNAG_01001	3.45e-197	yqfO	-	-	S	-	-	-	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
PLIICNAG_01002	6.01e-309	pepT	3.4.11.4	-	E	ko:K01258	-	ko00000,ko01000,ko01002	Cleaves the N-terminal amino acid of tripeptides
PLIICNAG_01003	7.06e-81	lexA	-	-	K	ko:K07979	-	ko00000,ko03000	Transcriptional regulator, GntR family
PLIICNAG_01004	3.13e-160	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
PLIICNAG_01005	9.64e-187	-	-	-	-	-	-	-	-
PLIICNAG_01006	2.79e-188	-	-	-	-	-	-	-	-
PLIICNAG_01007	1.19e-177	-	-	-	-	-	-	-	-
PLIICNAG_01008	3.03e-13	rarA	-	-	L	ko:K07478	-	ko00000	recombination factor protein RarA
PLIICNAG_01009	5.68e-146	rarA	-	-	L	ko:K07478	-	ko00000	recombination factor protein RarA
PLIICNAG_01010	7.83e-38	-	-	-	-	-	-	-	-
PLIICNAG_01011	7.35e-134	lepB	3.4.21.89	-	U	ko:K03100	ko02024,ko03060,map02024,map03060	ko00000,ko00001,ko01000,ko01002	Belongs to the peptidase S26 family
PLIICNAG_01012	1.83e-180	-	-	-	-	-	-	-	-
PLIICNAG_01013	3.94e-225	-	-	-	-	-	-	-	-
PLIICNAG_01014	0.0	rsmF	-	-	J	-	-	-	NOL1 NOP2 sun family protein
PLIICNAG_01015	1.77e-238	fni	5.3.3.2	-	C	ko:K01823	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
PLIICNAG_01016	4.69e-261	mvaK2	2.7.4.2	-	I	ko:K00938	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	phosphomevalonate kinase
PLIICNAG_01017	3.03e-230	mvaD	4.1.1.33	-	I	ko:K01597	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	diphosphomevalonate decarboxylase
PLIICNAG_01018	1.53e-214	mvk	2.7.1.36	-	I	ko:K00869	ko00900,ko01100,ko01110,ko01130,ko04146,map00900,map01100,map01110,map01130,map04146	ko00000,ko00001,ko00002,ko01000	GHMP kinases N terminal domain
PLIICNAG_01019	0.0	rexB	3.6.4.12	-	L	ko:K16899	-	ko00000,ko01000,ko03400	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
PLIICNAG_01020	0.0	addA	3.6.4.12	-	L	ko:K16898	-	ko00000,ko01000,ko03400	ATP-dependent helicase nuclease subunit A
PLIICNAG_01021	0.0	dinG	3.6.4.12	-	L	ko:K03722	-	ko00000,ko01000,ko03400	helicase involved in DNA repair and perhaps also replication
PLIICNAG_01022	3.49e-116	ypmB	-	-	S	-	-	-	Protein conserved in bacteria
PLIICNAG_01023	0.0	asnS	6.1.1.22	-	J	ko:K01893	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Asparaginyl-tRNA synthetase
PLIICNAG_01024	1.39e-148	dnaD	-	-	L	ko:K02086	-	ko00000	DnaD domain protein
PLIICNAG_01025	2.95e-146	nth	4.2.99.18	-	L	ko:K10773	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
PLIICNAG_01026	0.0	ponA	2.4.1.129, 3.4.16.4	GT51	M	ko:K05366	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01003,ko01011	penicillin-binding protein 1A
PLIICNAG_01027	1.07e-150	recU	-	-	L	ko:K03700	-	ko00000,ko03400	Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
PLIICNAG_01028	1.13e-137	ypsA	-	-	S	-	-	-	Belongs to the UPF0398 family
PLIICNAG_01029	1.29e-91	gpsB	-	-	D	-	-	-	Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
PLIICNAG_01030	5.4e-274	ypsC	-	-	L	ko:K07444	-	ko00000,ko01000	Belongs to the methyltransferase superfamily
PLIICNAG_01031	2.01e-255	cpdA	-	-	S	-	-	-	Calcineurin-like phosphoesterase
PLIICNAG_01032	0.0	fhs	6.3.4.3	-	F	ko:K01938	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Belongs to the formate--tetrahydrofolate ligase family
PLIICNAG_01033	7.77e-103	lspA	3.4.23.36	-	MU	ko:K03101	ko03060,map03060	ko00000,ko00001,ko01000,ko01002	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
PLIICNAG_01034	6.46e-212	rluD	5.4.99.23	-	J	ko:K06180	-	ko00000,ko01000,ko03009	Responsible for synthesis of pseudouridine from uracil
PLIICNAG_01035	1.44e-255	carA	6.3.5.5	-	F	ko:K01956	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthetase glutamine chain
PLIICNAG_01036	0.0	carB1	6.3.5.5	-	F	ko:K01955	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthase
PLIICNAG_01037	1.66e-168	ybbM	-	-	S	ko:K02069	-	ko00000,ko00002,ko02000	Uncharacterised protein family (UPF0014)
PLIICNAG_01038	8.08e-147	ybbL	-	-	S	ko:K02068	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PLIICNAG_01039	1.21e-40	-	-	-	K	ko:K07729	-	ko00000,ko03000	Helix-turn-helix XRE-family like proteins
PLIICNAG_01042	3.52e-311	-	4.2.1.11	-	G	ko:K01689	ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066	ko00000,ko00001,ko00002,ko01000,ko03019,ko04147	Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
PLIICNAG_01043	2.96e-94	-	-	-	S	-	-	-	EamA-like transporter family
PLIICNAG_01044	1.57e-31	-	-	-	I	-	-	-	bis(5'-adenosyl)-triphosphatase activity
PLIICNAG_01045	4.8e-85	-	3.6.1.17	-	FG	ko:K01518	ko00230,ko00240,map00230,map00240	ko00000,ko00001,ko01000	bis(5'-adenosyl)-triphosphatase activity
PLIICNAG_01046	8.77e-46	csd2	-	-	E	-	-	-	PFAM aminotransferase class V
PLIICNAG_01047	1.02e-30	csd2	-	-	E	-	-	-	PFAM aminotransferase class V
PLIICNAG_01048	8.74e-259	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
PLIICNAG_01049	2.6e-37	-	-	-	-	-	-	-	-
PLIICNAG_01051	2.36e-130	-	-	-	S	-	-	-	Replication initiation factor
PLIICNAG_01052	6.84e-183	-	-	-	D	-	-	-	Ftsk spoiiie family protein
PLIICNAG_01053	9.6e-108	-	-	-	-	-	-	-	-
PLIICNAG_01055	2.42e-266	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
PLIICNAG_01056	6.69e-39	-	-	-	-	-	-	-	-
PLIICNAG_01057	2.82e-210	-	-	-	EP	-	-	-	Plasmid replication protein
PLIICNAG_01059	4.52e-63	-	-	-	D	-	-	-	COG1674 DNA segregation ATPase FtsK SpoIIIE and related proteins
PLIICNAG_01061	1.27e-21	-	-	-	-	-	-	-	-
PLIICNAG_01064	4.84e-34	-	-	-	K	-	-	-	Probable zinc-ribbon domain
PLIICNAG_01065	4.39e-52	-	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
PLIICNAG_01066	1.47e-250	-	-	-	V	-	-	-	Protein of unknown function DUF262
PLIICNAG_01067	2.33e-167	-	-	-	S	-	-	-	Adenine-specific methyltransferase EcoRI
PLIICNAG_01068	1.44e-17	-	3.6.3.44	-	V	ko:K02021,ko:K06147,ko:K18104	ko01501,ko02010,map01501,map02010	ko00000,ko00001,ko00002,ko01000,ko01504,ko02000	ABC transporter transmembrane region
PLIICNAG_01070	2.71e-98	-	-	-	-	-	-	-	-
PLIICNAG_01071	5.72e-137	-	-	-	K	-	-	-	LysR substrate binding domain
PLIICNAG_01072	5.55e-27	-	-	-	-	-	-	-	-
PLIICNAG_01073	3.04e-278	-	-	-	S	-	-	-	Sterol carrier protein domain
PLIICNAG_01074	7.45e-124	citX	2.7.7.61	-	HI	ko:K05964	ko02020,map02020	ko00000,ko00001,ko01000	Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase
PLIICNAG_01075	3.05e-65	arcC	2.7.2.2	-	E	ko:K00926	ko00220,ko00230,ko00910,ko01100,ko01120,ko01200,map00220,map00230,map00910,map01100,map01120,map01200	ko00000,ko00001,ko01000	Belongs to the carbamate kinase family
PLIICNAG_01076	1.23e-87	arcC	2.7.2.2	-	E	ko:K00926	ko00220,ko00230,ko00910,ko01100,ko01120,ko01200,map00220,map00230,map00910,map01100,map01120,map01200	ko00000,ko00001,ko01000	Belongs to the carbamate kinase family
PLIICNAG_01077	5.91e-184	argF	2.1.3.3	-	E	ko:K00611	ko00220,ko01100,ko01110,ko01130,ko01230,map00220,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
PLIICNAG_01078	7.7e-17	argF	2.1.3.3	-	E	ko:K00611	ko00220,ko01100,ko01110,ko01130,ko01230,map00220,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
PLIICNAG_01079	6.12e-114	arcA	3.5.3.6	-	E	ko:K01478	ko00220,ko01100,ko01110,ko01130,map00220,map01100,map01110,map01130	ko00000,ko00001,ko01000	Arginine
PLIICNAG_01080	6.65e-19	arcA	3.5.3.6	-	E	ko:K01478	ko00220,ko01100,ko01110,ko01130,map00220,map01100,map01110,map01130	ko00000,ko00001,ko01000	Arginine
PLIICNAG_01081	5.18e-28	arcA	3.5.3.6	-	E	ko:K01478	ko00220,ko01100,ko01110,ko01130,map00220,map01100,map01110,map01130	ko00000,ko00001,ko01000	Arginine
PLIICNAG_01082	1.71e-202	lysR5	-	-	K	-	-	-	LysR substrate binding domain
PLIICNAG_01083	0.0	-	-	-	P	-	-	-	Cation transporter/ATPase, N-terminus
PLIICNAG_01084	3.75e-109	-	3.4.21.96	-	S	ko:K01361	-	ko00000,ko01000,ko01002,ko03110	SLAP domain
PLIICNAG_01085	0.0	cls	-	-	I	ko:K06131	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PLIICNAG_01086	1.07e-195	metA	2.3.1.46	-	E	ko:K00651	ko00270,ko00920,ko01100,ko01110,ko01230,map00270,map00920,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Transfers an acetyl group from acetyl-CoA to
PLIICNAG_01087	1.04e-211	cysK	2.5.1.47	-	E	ko:K01738	ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the cysteine synthase cystathionine beta- synthase family
PLIICNAG_01088	1.99e-122	apt	2.4.2.7	-	F	ko:K00759	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000,ko04147	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
PLIICNAG_01089	0.0	recJ	-	-	L	ko:K07462	ko03410,ko03430,ko03440,map03410,map03430,map03440	ko00000,ko00001,ko01000,ko03400	Single-stranded-DNA-specific exonuclease RecJ
PLIICNAG_01090	6.79e-152	srtA	3.4.22.70	-	M	ko:K07284	-	ko00000,ko01000,ko01002,ko01011	sortase family
PLIICNAG_01091	0.0	lepA	-	-	M	ko:K03596	ko05134,map05134	ko00000,ko00001	Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
PLIICNAG_01092	1.29e-21	-	-	-	-	-	-	-	-
PLIICNAG_01093	0.0	pckA	4.1.1.49	-	H	ko:K01610	ko00010,ko00020,ko00620,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00710,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Phosphoenolpyruvate carboxykinase
PLIICNAG_01094	0.0	-	-	-	S	-	-	-	TerB-C domain
PLIICNAG_01095	0.0	-	-	-	P	-	-	-	P-loop Domain of unknown function (DUF2791)
PLIICNAG_01096	0.0	-	-	-	L	ko:K03724	-	ko00000,ko01000,ko03400	DEAD DEAH box helicase
PLIICNAG_01097	3.9e-79	-	-	-	-	-	-	-	-
PLIICNAG_01098	1.98e-179	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2263)
PLIICNAG_01099	4.9e-11	-	-	-	K	-	-	-	Bacterial regulatory helix-turn-helix protein, lysR family
PLIICNAG_01100	5.65e-60	-	-	-	C	-	-	-	FAD binding domain
PLIICNAG_01101	5.84e-32	-	-	-	C	-	-	-	FAD binding domain
PLIICNAG_01102	1.63e-87	-	-	-	C	-	-	-	FAD binding domain
PLIICNAG_01104	1.96e-164	-	-	-	K	ko:K03710	-	ko00000,ko03000	UTRA
PLIICNAG_01105	9.96e-291	nagA	3.5.1.25	-	G	ko:K01443	ko00520,ko01130,map00520,map01130	ko00000,ko00001,ko01000	Belongs to the metallo-dependent hydrolases superfamily. NagA family
PLIICNAG_01106	8.08e-68	-	-	-	K	-	-	-	Helix-turn-helix domain, rpiR family
PLIICNAG_01107	4.09e-92	-	-	-	S	-	-	-	Iron-sulphur cluster biosynthesis
PLIICNAG_01108	1.52e-43	-	-	-	-	-	-	-	-
PLIICNAG_01109	4.63e-88	-	-	-	-	-	-	-	-
PLIICNAG_01110	1.56e-121	pphA	3.1.3.16	-	T	ko:K07313	-	ko00000,ko01000	Calcineurin-like phosphoesterase
PLIICNAG_01111	5.1e-33	pphA	3.1.3.16	-	T	ko:K07313	-	ko00000,ko01000	Calcineurin-like phosphoesterase
PLIICNAG_01112	5.26e-19	-	-	-	-	-	-	-	-
PLIICNAG_01113	3.08e-121	-	-	-	M	-	-	-	LysM domain protein
PLIICNAG_01114	9.67e-250	-	-	-	D	-	-	-	nuclear chromosome segregation
PLIICNAG_01115	3.24e-143	-	-	-	G	-	-	-	Phosphoglycerate mutase family
PLIICNAG_01116	5.39e-292	-	-	-	G	-	-	-	Antibiotic biosynthesis monooxygenase
PLIICNAG_01117	2.07e-170	glpQ1	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	glycerophosphoryl diester phosphodiesterase
PLIICNAG_01118	4.85e-65	-	-	-	-	-	-	-	-
PLIICNAG_01119	3.82e-35	rpmB	-	-	J	ko:K02902	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL28 family
PLIICNAG_01120	1.67e-74	yloU	-	-	S	-	-	-	Asp23 family, cell envelope-related function
PLIICNAG_01121	0.0	yloV	-	-	S	ko:K07030	-	ko00000	DAK2 domain fusion protein YloV
PLIICNAG_01122	0.0	recG	3.6.4.12	-	L	ko:K03655	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
PLIICNAG_01123	1.57e-234	plsX	2.3.1.15	-	I	ko:K03621	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
PLIICNAG_01124	3.1e-47	acpP	-	-	IQ	ko:K02078	-	ko00000,ko00001	Carrier of the growing fatty acid chain in fatty acid biosynthesis
PLIICNAG_01125	1.17e-246	oppD	-	-	P	ko:K02031,ko:K15583	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
PLIICNAG_01126	1.39e-230	oppF	-	-	P	ko:K02032	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
PLIICNAG_01127	6.07e-225	oppB	-	-	P	ko:K02033,ko:K02034	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
PLIICNAG_01128	5.59e-200	oppC5	-	-	P	ko:K02034	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PLIICNAG_01129	0.0	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
PLIICNAG_01130	0.0	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
PLIICNAG_01131	1.56e-161	rnc	3.1.26.3	-	J	ko:K03685	ko03008,ko05205,map03008,map05205	ko00000,ko00001,ko01000,ko03009,ko03019,ko03036	Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
PLIICNAG_01132	0.0	smc	-	-	D	ko:K03529	-	ko00000,ko03036	Required for chromosome condensation and partitioning
PLIICNAG_01133	1.04e-221	ftsY	-	-	U	ko:K03110	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
PLIICNAG_01134	0.0	pepD2	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
PLIICNAG_01137	2.98e-185	-	-	-	S	ko:K03328	-	ko00000	Membrane protein involved in the export of O-antigen and teichoic acid
PLIICNAG_01138	1.43e-55	-	-	-	S	-	-	-	Core-2/I-Branching enzyme
PLIICNAG_01140	3.32e-44	-	-	GT2	M	ko:K12997	-	ko00000,ko01000,ko01003,ko01005	Glycosyl transferase, family 2
PLIICNAG_01141	1.62e-82	-	-	-	M	-	-	-	Capsular polysaccharide synthesis protein
PLIICNAG_01142	1.26e-89	-	-	-	M	-	-	-	Glycosyltransferase, group 2 family protein
PLIICNAG_01143	7.21e-216	cps4F	-	-	M	-	-	-	Glycosyl transferases group 1
PLIICNAG_01144	2.26e-156	epsE2	-	-	M	-	-	-	Bacterial sugar transferase
PLIICNAG_01145	9.83e-188	ywqE	3.1.3.48	-	GM	ko:K01104	-	ko00000,ko01000	PHP domain protein
PLIICNAG_01146	2.2e-159	ywqD	-	-	D	-	-	-	Capsular exopolysaccharide family
PLIICNAG_01147	2.43e-187	epsB	-	-	M	-	-	-	biosynthesis protein
PLIICNAG_01148	2.87e-247	brpA	-	-	K	-	-	-	Cell envelope-like function transcriptional attenuator common domain protein
PLIICNAG_01149	9.54e-285	hflX	-	-	S	ko:K03665	-	ko00000,ko03009	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
PLIICNAG_01152	2.86e-198	-	-	-	M	ko:K21471	-	ko00000,ko01000,ko01002,ko01011	NlpC/P60 family
PLIICNAG_01153	5.51e-69	-	-	-	L	-	-	-	Putative transposase of IS4/5 family (DUF4096)
PLIICNAG_01154	2.41e-314	XK27_08635	-	-	S	ko:K09157	-	ko00000	UPF0210 protein
PLIICNAG_01155	4.82e-55	XK27_08630	-	-	T	ko:K07166	-	ko00000	Belongs to the UPF0237 family
PLIICNAG_01156	1.45e-152	-	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
PLIICNAG_01157	1.79e-248	-	-	-	S	-	-	-	DUF218 domain
PLIICNAG_01158	0.0	-	-	-	V	ko:K02003,ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PLIICNAG_01159	1.89e-126	-	-	-	S	-	-	-	ECF transporter, substrate-specific component
PLIICNAG_01160	1.25e-204	-	-	-	S	-	-	-	Aldo/keto reductase family
PLIICNAG_01161	4.67e-173	nagB	3.5.99.6	-	G	ko:K02564	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
PLIICNAG_01162	3.09e-128	-	-	-	K	-	-	-	rpiR family
PLIICNAG_01163	1.71e-182	-	-	-	S	ko:K09963	-	ko00000	Bacterial protein of unknown function (DUF871)
PLIICNAG_01164	1.76e-195	ybbE	3.4.16.4	-	V	ko:K21469	ko00550,map00550	ko00000,ko00001,ko01000,ko01002,ko01011	Beta-lactamase
PLIICNAG_01166	4.39e-159	murQ	4.2.1.126	-	G	ko:K07106	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
PLIICNAG_01167	0.0	pts32BC	2.7.1.211	-	G	ko:K02808,ko:K02809,ko:K02810	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
PLIICNAG_01169	1.57e-150	dak	2.7.1.76	-	F	ko:K10353	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000	deoxynucleoside kinase
PLIICNAG_01170	1.98e-164	dgk2	2.7.1.76	-	F	ko:K10353	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000	deoxynucleoside kinase
PLIICNAG_01171	1.01e-185	-	-	-	S	-	-	-	haloacid dehalogenase-like hydrolase
PLIICNAG_01172	5.85e-293	pbuG	-	-	S	ko:K06901	-	ko00000,ko02000	permease
PLIICNAG_01173	2.14e-220	-	-	-	S	ko:K07133	-	ko00000	cog cog1373
PLIICNAG_01174	0.0	-	-	-	V	-	-	-	ABC transporter transmembrane region
PLIICNAG_01175	4.85e-46	-	-	-	KLT	-	-	-	serine threonine protein kinase
PLIICNAG_01176	0.0	-	-	-	V	ko:K06147,ko:K06148	-	ko00000,ko02000	ABC transporter transmembrane region
PLIICNAG_01177	9.54e-49	-	-	-	-	-	-	-	-
PLIICNAG_01178	1.65e-55	-	-	-	-	-	-	-	-
PLIICNAG_01179	7.95e-172	natA	3.6.3.7	-	CP	ko:K01990,ko:K09697	ko02010,ko02020,map02010,map02020	ko00000,ko00001,ko00002,ko01000,ko02000	ATPases associated with a variety of cellular activities
PLIICNAG_01180	4.39e-160	-	-	-	V	ko:K01992	-	ko00000,ko00002,ko02000	Transport permease protein
PLIICNAG_01181	9.66e-161	-	-	-	V	ko:K01992	-	ko00000,ko00002,ko02000	Transport permease protein
PLIICNAG_01182	4.73e-102	-	-	-	L	-	-	-	COG3385 FOG Transposase and inactivated derivatives
PLIICNAG_01183	5.15e-175	treC	3.2.1.93	GH13	G	ko:K01226	ko00500,map00500	ko00000,ko00001,ko01000	Alpha amylase, catalytic domain protein
PLIICNAG_01184	0.0	-	-	-	-	-	-	-	-
PLIICNAG_01185	7.07e-106	-	-	-	-	-	-	-	-
PLIICNAG_01186	1.05e-142	msrA	1.8.4.11, 1.8.4.12	-	O	ko:K07304,ko:K12267	-	ko00000,ko01000	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PLIICNAG_01187	2.36e-84	-	-	-	S	-	-	-	ASCH domain
PLIICNAG_01188	1.47e-71	-	4.4.1.5	-	E	ko:K01759	ko00620,map00620	ko00000,ko00001,ko01000	lactoylglutathione lyase activity
PLIICNAG_01189	1.05e-313	-	-	-	S	ko:K12941	-	ko00000,ko01002	Peptidase dimerisation domain
PLIICNAG_01190	9.98e-180	-	-	-	S	-	-	-	Protein of unknown function (DUF3100)
PLIICNAG_01191	4.07e-107	-	-	-	S	-	-	-	An automated process has identified a potential problem with this gene model
PLIICNAG_01192	4.32e-46	-	-	-	-	-	-	-	-
PLIICNAG_01193	1.4e-104	-	-	-	S	-	-	-	Pyridoxamine 5'-phosphate oxidase
PLIICNAG_01194	2.66e-219	yobV3	-	-	K	-	-	-	WYL domain
PLIICNAG_01195	9.78e-89	-	-	-	S	-	-	-	pyridoxamine 5-phosphate
PLIICNAG_01196	0.0	npr	1.11.1.1	-	C	ko:K05910	-	ko00000,ko01000	NADH oxidase
PLIICNAG_01197	7.31e-38	-	-	-	-	-	-	-	-
PLIICNAG_01198	2.77e-248	-	-	-	L	-	-	-	Phage integrase family
PLIICNAG_01199	5.83e-87	rpsI	-	-	J	ko:K02996	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uS9 family
PLIICNAG_01200	6.51e-103	rplM	-	-	J	ko:K02871	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
PLIICNAG_01201	6.08e-183	truA	5.4.99.12	-	J	ko:K06173	-	ko00000,ko01000,ko03016	Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
PLIICNAG_01202	5.22e-179	ecfT	-	-	U	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PLIICNAG_01203	3.56e-191	ecfA2	-	-	P	ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PLIICNAG_01204	1.56e-194	ecfA1	-	-	P	ko:K16786	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PLIICNAG_01205	4.49e-80	rplQ	-	-	J	ko:K02879	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L17
PLIICNAG_01206	3.62e-218	rpoA	2.7.7.6	-	K	ko:K03040	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PLIICNAG_01207	1.1e-81	rpsK	-	-	J	ko:K02948	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
PLIICNAG_01208	1.46e-73	rpsM	-	-	J	ko:K02952	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
PLIICNAG_01209	1.89e-21	rpmJ	-	-	J	ko:K02919	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL36 family
PLIICNAG_01210	3.13e-46	infA	-	-	J	ko:K02518	-	ko00000,ko03012	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
PLIICNAG_01211	2.61e-155	adk	2.7.4.3	-	F	ko:K00939	ko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
PLIICNAG_01212	5.1e-301	secY	-	-	U	ko:K03076	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
PLIICNAG_01213	1.73e-93	rplO	-	-	J	ko:K02876	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to the 23S rRNA
PLIICNAG_01214	2.22e-34	rpmD	-	-	J	ko:K02907	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L30
PLIICNAG_01215	2.63e-110	rpsE	-	-	J	ko:K02988	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
PLIICNAG_01216	3.67e-73	rplR	-	-	J	ko:K02881	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
PLIICNAG_01217	5.05e-121	rplF	-	-	J	ko:K02933	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
PLIICNAG_01218	2.28e-89	rpsH	-	-	J	ko:K02994	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
PLIICNAG_01219	1e-39	rpsN	-	-	J	ko:K02954	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PLIICNAG_01220	7.13e-123	rplE	-	-	J	ko:K02931	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
PLIICNAG_01221	1.64e-43	rplX	-	-	J	ko:K02895	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
PLIICNAG_01222	2.1e-78	rplN	-	-	J	ko:K02874	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
PLIICNAG_01223	1.56e-55	rpsQ	-	-	J	ko:K02961	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
PLIICNAG_01224	1.45e-34	rpmC	-	-	J	ko:K02904	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uL29 family
PLIICNAG_01225	1.66e-100	rplP	-	-	J	ko:K02878	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
PLIICNAG_01226	1.75e-156	rpsC	-	-	J	ko:K02982	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
PLIICNAG_01227	9.07e-73	rplV	-	-	J	ko:K02890	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
PLIICNAG_01228	1.24e-61	rpsS	-	-	J	ko:K02965	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
PLIICNAG_01229	1.63e-197	rplB	-	-	J	ko:K02886	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
PLIICNAG_01230	4.67e-63	rplW	-	-	J	ko:K02892	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
PLIICNAG_01231	5.47e-137	rplD	-	-	J	ko:K02926	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the polypeptide exit tunnel
PLIICNAG_01232	3.29e-146	rplC	-	-	J	ko:K02906	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
PLIICNAG_01233	6.34e-66	rpsJ	-	-	J	ko:K02946	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Involved in the binding of tRNA to the ribosomes
PLIICNAG_01234	5.92e-73	-	1.1.1.346	-	S	ko:K06221	-	ko00000,ko01000	reductase
PLIICNAG_01235	8.23e-61	-	1.1.1.346	-	S	ko:K06221	-	ko00000,ko01000	reductase
PLIICNAG_01236	2.65e-304	pyrP	-	-	F	ko:K02824	-	ko00000,ko02000	Permease
PLIICNAG_01237	4.47e-115	pyrR	2.4.2.9	-	F	ko:K02825	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000,ko03000	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
PLIICNAG_01238	0.0	qacA	-	-	EGP	-	-	-	Major Facilitator
PLIICNAG_01239	1.09e-213	pmrA	-	-	EGP	ko:K08161	-	ko00000,ko02000	MFS_1 like family
PLIICNAG_01240	2.61e-40	pmrA	-	-	EGP	ko:K08161	-	ko00000,ko02000	MFS_1 like family
PLIICNAG_01241	1.07e-266	pepA	-	-	E	-	-	-	M42 glutamyl aminopeptidase
PLIICNAG_01242	0.0	ykpA	-	-	S	-	-	-	ABC transporter, ATP-binding protein
PLIICNAG_01243	3.05e-190	-	-	-	-	-	-	-	-
PLIICNAG_01244	6.43e-167	-	-	-	F	-	-	-	glutamine amidotransferase
PLIICNAG_01245	1.75e-189	peb1A	-	-	ET	ko:K10039	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
PLIICNAG_01246	4.91e-102	-	-	-	K	-	-	-	Transcriptional regulator, MarR family
PLIICNAG_01247	0.0	XK27_09600	-	-	V	ko:K06147,ko:K18891	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter, ATP-binding protein
PLIICNAG_01248	0.0	XK27_09605	-	-	V	ko:K18892	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter transmembrane region
PLIICNAG_01249	1.47e-130	ykoE	-	-	S	ko:K16925	-	ko00000,ko00002,ko02000	ABC-type cobalt transport system, permease component
PLIICNAG_01250	5.28e-118	-	-	-	EGP	-	-	-	Major facilitator superfamily
PLIICNAG_01251	6.26e-79	-	-	-	EGP	-	-	-	Major facilitator superfamily
PLIICNAG_01252	3.85e-105	udk	2.7.1.48	-	F	ko:K00876	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	Zeta toxin
PLIICNAG_01253	3.1e-24	udk	2.7.1.48	-	F	ko:K00876	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	Zeta toxin
PLIICNAG_01254	7.79e-112	-	-	-	L	ko:K07491	-	ko00000	Transposase IS200 like
PLIICNAG_01255	6.65e-145	-	-	-	I	-	-	-	Acid phosphatase homologues
PLIICNAG_01256	8.48e-145	maa3	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	transferase hexapeptide repeat
PLIICNAG_01257	3.74e-265	-	-	-	V	-	-	-	Beta-lactamase
PLIICNAG_01258	9.09e-193	pdxK	2.7.1.35	-	H	ko:K00868	ko00750,ko01100,map00750,map01100	ko00000,ko00001,ko01000	Phosphomethylpyrimidine kinase
PLIICNAG_01259	8.22e-120	-	-	-	S	-	-	-	ECF-type riboflavin transporter, S component
PLIICNAG_01260	1.43e-294	-	-	-	S	-	-	-	Putative peptidoglycan binding domain
PLIICNAG_01261	1.21e-301	mepA	-	-	V	ko:K18908	-	ko00000,ko00002,ko01504,ko02000	MATE efflux family protein
PLIICNAG_01262	0.0	pepT	3.4.11.4	-	E	ko:K01258	-	ko00000,ko01000,ko01002	Cleaves the N-terminal amino acid of tripeptides
PLIICNAG_01263	9.66e-46	-	-	-	-	-	-	-	-
PLIICNAG_01264	4.31e-40	-	-	-	D	ko:K04095	-	ko00000,ko03036	Fic/DOC family
PLIICNAG_01265	2.32e-79	-	-	-	-	-	-	-	-
PLIICNAG_01266	0.0	-	-	-	P	ko:K06148	-	ko00000,ko02000	ABC transporter
PLIICNAG_01267	0.0	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
PLIICNAG_01268	1.18e-126	-	-	-	S	ko:K11621	ko02020,map02020	ko00000,ko00001	Putative adhesin
PLIICNAG_01269	3.06e-77	-	-	-	S	ko:K08987	-	ko00000	Protein of unknown function (DUF1304)
PLIICNAG_01270	1.6e-116	-	-	-	-	-	-	-	-
PLIICNAG_01271	1.85e-87	-	-	-	-	-	-	-	-
PLIICNAG_01272	1.92e-135	-	-	-	S	-	-	-	Fic/DOC family
PLIICNAG_01273	1.17e-132	-	-	-	-	-	-	-	-
PLIICNAG_01274	4.71e-264	-	-	-	EGP	-	-	-	Major Facilitator Superfamily
PLIICNAG_01275	8.72e-172	-	-	-	-	-	-	-	-
PLIICNAG_01276	1.88e-141	tag	3.2.2.20	-	L	ko:K01246	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	glycosylase
PLIICNAG_01277	8.26e-106	-	-	-	-	-	-	-	-
PLIICNAG_01278	0.0	-	-	-	S	-	-	-	Calcineurin-like phosphoesterase
PLIICNAG_01279	0.0	asnB	6.3.5.4	-	E	ko:K01953	ko00250,ko01100,ko01110,map00250,map01100,map01110	ko00000,ko00001,ko01000,ko01002	Asparagine synthase
PLIICNAG_01280	0.0	yxbA	6.3.1.12	-	S	ko:K17810	-	ko00000,ko01000	ATP-grasp enzyme
PLIICNAG_01283	0.0	nrdD	1.1.98.6	-	F	ko:K21636	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Ribonucleoside-triphosphate reductase
PLIICNAG_01284	1.35e-180	nrdG	1.97.1.4	-	O	ko:K04068	-	ko00000,ko01000	Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PLIICNAG_01285	6.51e-128	yitW	-	-	S	-	-	-	Iron-sulfur cluster assembly protein
PLIICNAG_01286	4.09e-292	XK27_04775	-	-	S	ko:K09155	-	ko00000	PAS domain
PLIICNAG_01287	1.42e-287	yttB	-	-	EGP	-	-	-	Major Facilitator
PLIICNAG_01288	0.0	pepO	-	-	O	ko:K07386	-	ko00000,ko01000,ko01002	Peptidase family M13
PLIICNAG_01289	0.0	kup	-	-	P	ko:K03549	-	ko00000,ko02000	Transport of potassium into the cell
PLIICNAG_01290	8.43e-113	-	-	-	-	-	-	-	-
PLIICNAG_01291	7.93e-19	-	-	-	-	-	-	-	-
PLIICNAG_01292	2.86e-39	-	-	-	-	-	-	-	-
PLIICNAG_01293	3.68e-50	-	-	-	S	-	-	-	Protein of unknown function (DUF2922)
PLIICNAG_01294	1.68e-233	-	-	-	S	-	-	-	SLAP domain
PLIICNAG_01296	9.59e-11	-	-	-	K	-	-	-	DNA-templated transcription, initiation
PLIICNAG_01297	1.89e-34	-	-	-	K	-	-	-	DNA-templated transcription, initiation
PLIICNAG_01298	6.06e-124	-	-	-	-	-	-	-	-
PLIICNAG_01299	1.12e-285	-	-	-	NU	-	-	-	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
PLIICNAG_01300	5.77e-268	-	3.2.1.96, 3.5.1.28	GH73	M	ko:K01227,ko:K01447,ko:K13714,ko:K13731	ko00511,ko05100,map00511,map05100	ko00000,ko00001,ko01000	N-acetylmuramoyl-L-alanine amidase
PLIICNAG_01301	0.0	yjbQ	-	-	P	ko:K03455,ko:K03499	-	ko00000,ko02000	TrkA C-terminal domain protein
PLIICNAG_01302	1.5e-32	-	-	-	K	-	-	-	Protein of unknown function (DUF4065)
PLIICNAG_01303	4.01e-119	-	-	-	K	-	-	-	Protein of unknown function (DUF4065)
PLIICNAG_01304	1.56e-228	-	-	-	S	-	-	-	Oxidoreductase family, NAD-binding Rossmann fold
PLIICNAG_01305	4.31e-152	-	-	-	-	-	-	-	-
PLIICNAG_01306	8.29e-173	-	-	-	-	-	-	-	-
PLIICNAG_01307	1.84e-170	gpmA	5.4.2.11	-	G	ko:K01834	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PLIICNAG_01308	1.41e-141	pcp	3.4.19.3	-	O	ko:K01304	-	ko00000,ko01000,ko01002	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
PLIICNAG_01309	4.62e-131	-	-	-	G	-	-	-	Aldose 1-epimerase
PLIICNAG_01310	1.06e-257	brpA	-	-	K	-	-	-	Cell envelope-like function transcriptional attenuator common domain protein
PLIICNAG_01311	3.19e-145	plsY1	2.3.1.15	-	I	ko:K08591	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
PLIICNAG_01312	0.0	XK27_08315	-	-	M	-	-	-	Sulfatase
PLIICNAG_01313	0.0	-	-	-	S	-	-	-	Fibronectin type III domain
PLIICNAG_01314	6.28e-310	tyrS	6.1.1.1	-	J	ko:K01866	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
PLIICNAG_01315	1.85e-28	-	-	-	-	-	-	-	-
PLIICNAG_01317	0.0	pepC1	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	aminopeptidase
PLIICNAG_01318	4e-152	ypgQ	-	-	S	ko:K06950	-	ko00000	Metal dependent phosphohydrolases with conserved 'HD' motif.
PLIICNAG_01319	3.09e-267	guaB	1.1.1.205	-	F	ko:K00088	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
PLIICNAG_01320	0.0	pepE	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	aminopeptidase
PLIICNAG_01321	1.75e-95	hsp	-	-	O	ko:K13993	ko04141,map04141	ko00000,ko00001,ko03110	Belongs to the small heat shock protein (HSP20) family
PLIICNAG_01322	1.57e-97	greA	-	-	K	ko:K03624	-	ko00000,ko03021	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PLIICNAG_01323	6.33e-148	-	-	-	-	-	-	-	-
PLIICNAG_01325	2.55e-148	-	-	-	E	-	-	-	Belongs to the SOS response-associated peptidase family
PLIICNAG_01326	2.35e-244	trpS	6.1.1.2	-	J	ko:K01867	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-I aminoacyl-tRNA synthetase family
PLIICNAG_01327	6.34e-118	comEB	3.5.4.12	-	F	ko:K01493	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko02044	MafB19-like deaminase
PLIICNAG_01328	4.07e-141	-	-	-	S	ko:K06872	-	ko00000	TPM domain
PLIICNAG_01329	0.0	mgtA	3.6.3.2	-	P	ko:K01531	-	ko00000,ko01000	COG0474 Cation transport ATPase
PLIICNAG_01330	0.0	metG	6.1.1.10	-	J	ko:K01874	ko00450,ko00970,map00450,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
PLIICNAG_01331	3.86e-189	tatD	-	-	L	ko:K03424	-	ko00000,ko01000	hydrolase, TatD family
PLIICNAG_01332	2.1e-128	rnmV	3.1.26.8	-	J	ko:K05985	-	ko00000,ko01000	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
PLIICNAG_01333	6.96e-207	ksgA	2.1.1.182	-	J	ko:K02528	-	ko00000,ko01000,ko03009	Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
PLIICNAG_01334	3.35e-51	veg	-	-	S	-	-	-	Biofilm formation stimulator VEG
PLIICNAG_01335	3.54e-191	purR	-	-	F	ko:K09685	-	ko00000,ko03000	pur operon repressor
PLIICNAG_01336	2.68e-309	glmU	2.3.1.157, 2.7.7.23	-	M	ko:K04042	ko00520,ko01100,ko01130,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
PLIICNAG_01337	1.91e-119	-	-	-	S	-	-	-	SLAP domain
PLIICNAG_01338	5.73e-120	-	-	-	S	-	-	-	VanZ like family
PLIICNAG_01339	3.98e-171	yebC	-	-	K	-	-	-	Transcriptional regulatory protein
PLIICNAG_01340	2.29e-227	comGA	-	-	NU	ko:K02243	-	ko00000,ko00002,ko02044	Type II IV secretion system protein
PLIICNAG_01341	6.49e-223	comGB	-	-	NU	ko:K02244	-	ko00000,ko00002,ko02044	type II secretion system
PLIICNAG_01342	6.15e-66	comGC	-	-	U	ko:K02245	-	ko00000,ko00002,ko02044	competence protein ComGC
PLIICNAG_01343	2.04e-95	-	-	-	-	ko:K02246	-	ko00000,ko00002,ko02044	-
PLIICNAG_01344	1.18e-55	-	-	-	-	-	-	-	-
PLIICNAG_01345	5.97e-106	-	-	-	U	ko:K02248	-	ko00000,ko00002,ko02044	Putative Competence protein ComGF
PLIICNAG_01346	1.46e-239	ytxK	2.1.1.72	-	L	ko:K00571	-	ko00000,ko01000,ko02048	N-6 DNA Methylase
PLIICNAG_01347	3.19e-283	ackA	2.7.2.1	-	F	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PLIICNAG_01349	1.38e-51	-	-	-	M	-	-	-	Protein of unknown function (DUF3737)
PLIICNAG_01350	5.04e-48	-	-	-	M	-	-	-	Protein of unknown function (DUF3737)
PLIICNAG_01351	4.03e-286	patB	4.4.1.8	-	E	ko:K14155	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko01000,ko01007	Aminotransferase, class I
PLIICNAG_01352	3.23e-221	manA	5.3.1.8	-	G	ko:K01809	ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	mannose-6-phosphate isomerase
PLIICNAG_01353	8.14e-80	-	-	-	S	-	-	-	SdpI/YhfL protein family
PLIICNAG_01354	4.46e-167	-	-	-	K	-	-	-	Transcriptional regulatory protein, C terminal
PLIICNAG_01355	0.0	yclK	-	-	T	-	-	-	Histidine kinase
PLIICNAG_01356	0.0	ltaS	2.7.8.20	-	M	ko:K19005	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
PLIICNAG_01357	3.89e-136	vanZ	-	-	V	-	-	-	VanZ like family
PLIICNAG_01358	0.0	pgi	5.3.1.9	-	G	ko:K01810	ko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the GPI family
PLIICNAG_01359	2.14e-59	-	-	-	K	-	-	-	Transcriptional regulator, AbiEi antitoxin
PLIICNAG_01360	7.41e-89	-	-	-	S	-	-	-	Nucleotidyl transferase AbiEii toxin, Type IV TA system
PLIICNAG_01361	2.73e-60	-	-	-	D	ko:K19159	-	ko00000,ko02048	Antitoxin component of a toxin-antitoxin (TA) module
PLIICNAG_01362	7.52e-80	-	-	-	S	-	-	-	Bacterial toxin of type II toxin-antitoxin system, YafQ
PLIICNAG_01365	1.11e-37	-	-	-	S	-	-	-	HicB family
PLIICNAG_01366	4.61e-42	bioY2	-	-	S	ko:K03523	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Biotin synthase
PLIICNAG_01367	5.95e-95	-	-	-	I	-	-	-	Alpha/beta hydrolase family
PLIICNAG_01368	1.36e-114	-	-	-	S	-	-	-	Membrane
PLIICNAG_01369	1.47e-63	-	-	-	S	-	-	-	Membrane
PLIICNAG_01370	5.17e-157	-	-	-	C	-	-	-	Zinc-binding dehydrogenase
PLIICNAG_01371	9.37e-187	proWY	-	-	M	ko:K05845	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter, substrate-binding protein, QAT family
PLIICNAG_01372	1.17e-114	proWZ	-	-	P	ko:K05846	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
PLIICNAG_01373	3.92e-141	proV	-	-	E	ko:K05847	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter, ATP-binding protein
PLIICNAG_01374	2.15e-113	-	-	-	P	ko:K05846	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter, permease protein
PLIICNAG_01375	7.56e-77	-	-	-	S	-	-	-	YjbR
PLIICNAG_01377	7.31e-81	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
PLIICNAG_01378	3e-48	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
PLIICNAG_01379	5.75e-124	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
PLIICNAG_01380	0.0	uvrA2	-	-	L	ko:K03701	ko03420,map03420	ko00000,ko00001,ko03400	excinuclease ABC, A subunit
PLIICNAG_01381	2.21e-08	-	-	-	S	-	-	-	Protein of unknown function (DUF3923)
PLIICNAG_01383	3.82e-137	-	3.6.1.66	-	F	ko:K02428	ko00230,map00230	ko00000,ko00001,ko01000	Ham1 family
PLIICNAG_01384	1.96e-98	-	-	-	K	-	-	-	LytTr DNA-binding domain
PLIICNAG_01385	2.3e-96	-	-	-	S	-	-	-	Protein of unknown function (DUF3021)
PLIICNAG_01386	3.74e-115	ybaK	-	-	S	ko:K03976	-	ko00000,ko01000,ko03016	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
PLIICNAG_01387	1.43e-221	prmA	-	-	J	ko:K02687	-	ko00000,ko01000,ko03009	Ribosomal protein L11 methyltransferase
PLIICNAG_01388	1.55e-79	-	-	-	-	-	-	-	-
PLIICNAG_01389	0.0	relA	2.7.6.5	-	KT	ko:K00951	ko00230,map00230	ko00000,ko00001,ko01000	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
PLIICNAG_01390	4.97e-97	dtd	-	-	J	ko:K07560	-	ko00000,ko01000,ko03016	rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
PLIICNAG_01391	7.41e-313	hisS	6.1.1.21	-	J	ko:K01892	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	histidyl-tRNA synthetase
PLIICNAG_01392	0.0	aspS	6.1.1.12	-	J	ko:K01876	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
PLIICNAG_01393	6.43e-283	aspC	-	-	E	ko:K00841	ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase
PLIICNAG_01394	7.46e-279	coaBC	4.1.1.36, 6.3.2.5	-	H	ko:K01598,ko:K13038	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
PLIICNAG_01395	3.02e-46	-	-	-	S	-	-	-	reductase
PLIICNAG_01396	1.77e-95	-	-	-	S	-	-	-	reductase
PLIICNAG_01397	1.58e-110	yxeH	-	-	S	-	-	-	hydrolase
PLIICNAG_01398	9.08e-34	yxeH	-	-	S	-	-	-	hydrolase
PLIICNAG_01399	6.37e-14	yxeH	-	-	S	-	-	-	hydrolase
PLIICNAG_01400	8.27e-19	gyaR	1.1.1.215, 1.1.1.26, 1.1.1.79, 1.1.1.81	-	CH	ko:K00015,ko:K00090	ko00030,ko00260,ko00620,ko00630,ko01100,ko01110,ko01120,map00030,map00260,map00620,map00630,map01100,map01110,map01120	ko00000,ko00001,ko01000	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PLIICNAG_01401	1.89e-99	gyaR	1.1.1.26, 1.1.1.399, 1.1.1.95	-	CH	ko:K00015,ko:K00058	ko00260,ko00630,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00260,map00630,map00680,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PLIICNAG_01402	4.95e-57	gyaR	1.1.1.215, 1.1.1.26, 1.1.1.79, 1.1.1.81	-	CH	ko:K00015,ko:K00090	ko00030,ko00260,ko00620,ko00630,ko01100,ko01110,ko01120,map00030,map00260,map00620,map00630,map01100,map01110,map01120	ko00000,ko00001,ko01000	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PLIICNAG_01403	0.0	yhdG	-	-	E	ko:K03294	-	ko00000	Amino Acid
PLIICNAG_01404	4.88e-73	yngC	-	-	S	-	-	-	SNARE associated Golgi protein
PLIICNAG_01405	3.32e-14	yngC	-	-	S	-	-	-	SNARE associated Golgi protein
PLIICNAG_01406	1.05e-228	lipA	-	-	I	-	-	-	Carboxylesterase family
PLIICNAG_01407	6.33e-87	yusI	1.20.4.1	-	P	ko:K00537	-	ko00000,ko01000	Belongs to the ArsC family
PLIICNAG_01408	7.87e-37	-	-	-	-	-	-	-	-
PLIICNAG_01409	1.17e-79	-	-	-	S	-	-	-	Bacterial PH domain
PLIICNAG_01410	0.0	pepX	3.4.14.11	-	E	ko:K01281	-	ko00000,ko01000,ko01002	Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
PLIICNAG_01411	9.88e-152	-	2.3.1.81	-	V	ko:K00662	-	ko00000,ko01000,ko01504	Aminoglycoside 3-N-acetyltransferase
PLIICNAG_01412	5.9e-183	-	-	-	F	-	-	-	Phosphorylase superfamily
PLIICNAG_01413	2.14e-185	-	-	-	F	-	-	-	Phosphorylase superfamily
PLIICNAG_01414	2.92e-192	-	-	-	M	-	-	-	Phosphotransferase enzyme family
PLIICNAG_01415	2.64e-119	-	-	-	S	-	-	-	AAA domain
PLIICNAG_01416	3.73e-44	cdd	2.4.2.4, 3.5.4.5	-	F	ko:K00758,ko:K01489	ko00240,ko00983,ko01100,ko05219,map00240,map00983,map01100,map05219	ko00000,ko00001,ko01000	cytidine deaminase activity
PLIICNAG_01417	8.78e-30	codA	-	-	F	-	-	-	Cytidine and deoxycytidylate deaminase zinc-binding region
PLIICNAG_01418	1.44e-203	yxaM	-	-	EGP	-	-	-	Major facilitator Superfamily
PLIICNAG_01419	1.23e-67	yjhB	3.6.1.13	-	F	ko:K01515	ko00230,map00230	ko00000,ko00001,ko01000	NUDIX domain
PLIICNAG_01420	1.78e-42	-	-	-	S	-	-	-	Protein of unknown function (DUF3923)
PLIICNAG_01421	7.55e-58	-	-	-	-	ko:K07473	-	ko00000,ko02048	-
PLIICNAG_01422	1.88e-74	-	-	-	-	-	-	-	-
PLIICNAG_01423	9.76e-36	-	-	-	S	-	-	-	MazG-like family
PLIICNAG_01424	1.7e-189	-	-	-	S	-	-	-	Protein of unknown function (DUF2785)
PLIICNAG_01425	5.11e-106	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
PLIICNAG_01426	7.4e-62	-	-	-	-	-	-	-	-
PLIICNAG_01427	4.44e-104	msrB	1.8.4.12	-	O	ko:K07305	-	ko00000,ko01000	peptide methionine sulfoxide reductase
PLIICNAG_01428	1.29e-63	-	-	-	-	-	-	-	-
PLIICNAG_01429	4.89e-54	-	-	-	U	ko:K05340	-	ko00000,ko02000	sugar transport
PLIICNAG_01430	4.64e-108	-	-	-	U	ko:K05340	-	ko00000,ko02000	sugar transport
PLIICNAG_01431	4.58e-84	-	-	-	S	-	-	-	Domain of unknown function (DUF4411)
PLIICNAG_01432	8.23e-219	whiA	-	-	K	ko:K09762	-	ko00000	May be required for sporulation
PLIICNAG_01433	1.27e-247	yvcK	-	-	S	-	-	-	Required for morphogenesis under gluconeogenic growth conditions
PLIICNAG_01434	2.09e-211	yvcJ	-	-	S	ko:K06958	-	ko00000,ko03019	Displays ATPase and GTPase activities
PLIICNAG_01435	2.64e-109	-	-	-	S	-	-	-	Short repeat of unknown function (DUF308)
PLIICNAG_01436	0.0	uvrA	-	-	L	ko:K03701	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
PLIICNAG_01437	0.0	uvrB	-	-	L	ko:K03702	ko03420,map03420	ko00000,ko00001,ko03400	damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
PLIICNAG_01438	0.0	pgm	5.4.2.2	-	G	ko:K01835	ko00010,ko00030,ko00052,ko00230,ko00500,ko00520,ko00521,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00052,map00230,map00500,map00520,map00521,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
PLIICNAG_01439	0.0	malZ	3.2.1.20, 3.2.1.41	CBM48,GH13,GH31	G	ko:K01187,ko:K01200	ko00052,ko00500,ko01100,ko01110,map00052,map00500,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 13 family
PLIICNAG_01440	0.0	glgP	2.4.1.1	GT35	G	ko:K00688	ko00500,ko01100,ko01110,ko02026,ko04217,ko04910,ko04922,ko04931,map00500,map01100,map01110,map02026,map04217,map04910,map04922,map04931	ko00000,ko00001,ko01000	Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
PLIICNAG_01441	0.0	glgA	2.4.1.21	GT5	F	ko:K00703	ko00500,ko01100,ko01110,ko02026,map00500,map01100,map01110,map02026	ko00000,ko00001,ko00002,ko01000,ko01003	Synthesizes alpha-1,4-glucan chains using ADP-glucose
PLIICNAG_01442	5.84e-140	glgD	2.7.7.27	-	G	ko:K00975	ko00500,ko00520,ko01100,ko01110,ko02026,map00500,map00520,map01100,map01110,map02026	ko00000,ko00001,ko00002,ko01000	Nucleotidyl transferase
PLIICNAG_01443	1.39e-60	aspD	4.1.1.12	-	E	ko:K09758	ko00250,ko00270,ko01100,ko01230,map00250,map00270,map01100,map01230	ko00000,ko00001,ko01000	Aminotransferase class I and II
PLIICNAG_01444	0.0	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	FtsX-like permease family
PLIICNAG_01445	2.9e-172	cysA	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PLIICNAG_01446	7e-304	-	-	-	S	-	-	-	response to antibiotic
PLIICNAG_01447	2.15e-161	-	-	-	-	-	-	-	-
PLIICNAG_01448	9.35e-143	pacL3	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	P-type ATPase
PLIICNAG_01449	3.18e-37	pacL3	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	P-type ATPase
PLIICNAG_01450	1.84e-30	pacL3	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	P-type ATPase
PLIICNAG_01451	3.21e-27	-	-	-	-	-	-	-	-
PLIICNAG_01452	7.24e-22	-	-	-	-	-	-	-	-
PLIICNAG_01453	2.73e-240	ansA	3.5.1.1	-	EJ	ko:K01424	ko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110	ko00000,ko00001,ko01000	L-asparaginase, type I
PLIICNAG_01454	1.04e-169	-	-	-	K	ko:K03481	-	ko00000,ko03000	Helix-turn-helix domain, rpiR family
PLIICNAG_01455	0.0	malH	3.2.1.122	GH4	G	ko:K01232	ko00500,map00500	ko00000,ko00001,ko01000	Family 4 glycosyl hydrolase C-terminal domain
PLIICNAG_01456	2.06e-52	-	-	-	-	-	-	-	-
PLIICNAG_01457	8.26e-60	-	-	-	-	-	-	-	-
PLIICNAG_01458	3.44e-127	-	-	-	-	-	-	-	-
PLIICNAG_01459	8.65e-52	-	-	-	K	ko:K06977	-	ko00000	acetyltransferase
PLIICNAG_01460	3.04e-114	-	-	-	V	-	-	-	Beta-lactamase
PLIICNAG_01461	4.1e-67	XK27_04775	-	-	S	ko:K09155	-	ko00000	PAS domain
PLIICNAG_01462	1.16e-241	yhaM	-	-	S	ko:K03698	-	ko00000,ko01000,ko03019	Metal dependent phosphohydrolases with conserved 'HD' motif.
PLIICNAG_01463	0.0	yhaN	-	-	L	-	-	-	AAA domain
PLIICNAG_01464	6.8e-291	yhaO	-	-	L	ko:K03547	-	ko00000,ko03400	Ser Thr phosphatase family protein
PLIICNAG_01465	8.43e-73	yheA	-	-	S	-	-	-	Belongs to the UPF0342 family
PLIICNAG_01466	0.0	pbp2A	2.4.1.129, 3.4.16.4	GT51	M	ko:K12555	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01003,ko01011	penicillin-binding protein
PLIICNAG_01467	4.21e-208	rluA	5.4.99.23, 5.4.99.28, 5.4.99.29	-	J	ko:K06177,ko:K06180	-	ko00000,ko01000,ko03009,ko03016	Responsible for synthesis of pseudouridine from uracil
PLIICNAG_01468	3.87e-12	-	-	-	C	-	-	-	FMN-dependent dehydrogenase
PLIICNAG_01469	1.36e-58	mgtC3	-	-	S	ko:K07507	-	ko00000,ko02000	MgtC family
PLIICNAG_01470	3.19e-93	mgtC3	-	-	S	ko:K07507	-	ko00000,ko02000	MgtC family
PLIICNAG_01471	6.12e-179	glpF	-	-	U	ko:K02440	-	ko00000,ko02000	Belongs to the MIP aquaporin (TC 1.A.8) family
PLIICNAG_01472	5.88e-72	-	-	-	-	-	-	-	-
PLIICNAG_01473	7.76e-193	citG	2.4.2.52	-	H	ko:K05966	ko02020,map02020	ko00000,ko00001,ko01000	2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase
PLIICNAG_01476	8.75e-198	yitS	-	-	S	-	-	-	EDD domain protein, DegV family
PLIICNAG_01477	6.3e-110	-	-	-	K	-	-	-	Domain of unknown function (DUF1836)
PLIICNAG_01479	2.31e-119	epsB	-	-	M	-	-	-	biosynthesis protein
PLIICNAG_01480	2.09e-26	ywqE	3.1.3.48	-	GM	ko:K01104	-	ko00000,ko01000	PHP domain protein
PLIICNAG_01481	6.87e-153	rfbP	-	-	M	ko:K13012,ko:K19428	-	ko00000,ko01000,ko01005	Bacterial sugar transferase
PLIICNAG_01482	5.84e-268	-	-	GT4	M	ko:K19424	-	ko00000,ko01000,ko01003	Glycosyl transferases group 1
PLIICNAG_01483	6.95e-197	cps4I	-	-	M	-	-	-	Glycosyltransferase like family 2
PLIICNAG_01484	2.8e-240	-	-	-	S	-	-	-	EpsG family
PLIICNAG_01485	8.72e-173	-	-	-	M	-	-	-	Glycosyltransferase sugar-binding region containing DXD motif
PLIICNAG_01486	2.29e-294	-	-	-	M	-	-	-	CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
PLIICNAG_01487	3.43e-96	-	2.7.7.39	-	IM	ko:K00980	ko00564,map00564	ko00000,ko00001,ko01000	Cytidylyltransferase-like
PLIICNAG_01488	1.04e-233	-	-	-	E	-	-	-	Asparagine synthase
PLIICNAG_01489	1.62e-297	cps4J	-	-	S	-	-	-	MatE
PLIICNAG_01490	5.05e-189	-	-	-	D	ko:K03496	-	ko00000,ko03036,ko04812	CobQ CobB MinD ParA nucleotide binding domain protein
PLIICNAG_01492	2.66e-57	-	-	-	S	-	-	-	Enterocin A Immunity
PLIICNAG_01493	5.6e-65	lctP	-	-	C	ko:K03303	-	ko00000,ko02000	L-lactate permease
PLIICNAG_01494	8.58e-112	lctP	-	-	C	ko:K03303	-	ko00000,ko02000	L-lactate permease
PLIICNAG_01495	1.88e-43	lctP	-	-	C	ko:K03303	-	ko00000,ko02000	L-lactate permease
PLIICNAG_01496	5.08e-129	-	-	-	E	ko:K02054	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PLIICNAG_01497	1.29e-141	potC3	-	-	E	ko:K02053	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PLIICNAG_01498	5.74e-170	potA11	3.6.3.30	-	P	ko:K02010,ko:K02052	ko02010,ko02024,map02010,map02024	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
PLIICNAG_01499	4.27e-189	-	-	-	P	ko:K02055	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter
PLIICNAG_01500	7.1e-312	ade	3.5.4.2	-	F	ko:K01486	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000	Adenine deaminase C-terminal domain
PLIICNAG_01501	1.44e-115	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
PLIICNAG_01502	7.72e-297	tcyP	-	-	U	ko:K06956	-	ko00000	Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
PLIICNAG_01503	9.17e-172	znuB	-	-	U	ko:K02075,ko:K09816	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC 3 transport family
PLIICNAG_01504	1.63e-152	adcC	-	-	P	ko:K02074,ko:K09817,ko:K11710	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter
PLIICNAG_01505	1.8e-202	-	-	-	P	ko:K02077	-	ko00000,ko00002,ko02000	Belongs to the bacterial solute-binding protein 9 family
PLIICNAG_01506	2.66e-57	-	-	-	K	ko:K21903	-	ko00000,ko03000	helix_turn_helix, Arsenical Resistance Operon Repressor
PLIICNAG_01507	1.27e-22	-	-	-	S	-	-	-	Transglycosylase associated protein
PLIICNAG_01508	1.18e-119	pdp	2.4.2.2	-	F	ko:K00756	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	pyrimidine-nucleoside phosphorylase
PLIICNAG_01509	1.8e-21	pdp	2.4.2.2	-	F	ko:K00756	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	pyrimidine-nucleoside phosphorylase
PLIICNAG_01510	2.53e-31	pdp	2.4.2.2	-	F	ko:K00756	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	pyrimidine-nucleoside phosphorylase
PLIICNAG_01511	5.77e-102	fabZ	4.2.1.59	-	I	ko:K02372	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
PLIICNAG_01512	2.06e-103	-	-	-	K	-	-	-	Transcriptional regulator
PLIICNAG_01513	3.02e-229	fabH	2.3.1.180	-	I	ko:K00648	ko00061,ko01100,ko01212,map00061,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
PLIICNAG_01514	1.53e-47	acpP	-	-	IQ	ko:K02078	-	ko00000,ko00001	Carrier of the growing fatty acid chain in fatty acid biosynthesis
PLIICNAG_01515	1.66e-215	fabD	2.3.1.39	-	I	ko:K00645,ko:K15327,ko:K15329	ko00061,ko00333,ko01100,ko01130,ko01212,map00061,map00333,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004,ko01008	Malonyl CoA-acyl carrier protein transacylase
PLIICNAG_01516	1.8e-163	fabG	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	reductase
PLIICNAG_01517	8.97e-293	fabF	2.3.1.179	-	I	ko:K09458	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
PLIICNAG_01518	5.23e-102	accB	-	-	I	ko:K02160	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002	first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
PLIICNAG_01519	1.64e-94	fabZ2	4.2.1.59	-	I	ko:K02372	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	FabA-like domain
PLIICNAG_01520	0.0	accC	6.3.4.14, 6.4.1.2	-	I	ko:K01961	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002,ko01000	Acetyl-CoA carboxylase biotin carboxylase subunit
PLIICNAG_01521	5.09e-202	accD	2.1.3.15, 6.4.1.2	-	I	ko:K01963	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002,ko01000	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
PLIICNAG_01522	2.6e-183	accA	2.1.3.15, 6.4.1.2	-	I	ko:K01962	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002,ko01000	alpha subunit
PLIICNAG_01523	8.96e-173	fabI	1.3.1.10, 1.3.1.9	-	I	ko:K00208	ko00061,ko00333,ko00780,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Enoyl- acyl-carrier-protein reductase NADH
PLIICNAG_01524	2.25e-241	birA	6.3.4.15	-	H	ko:K03524	ko00780,ko01100,map00780,map01100	ko00000,ko00001,ko01000,ko03000	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
PLIICNAG_01525	1.15e-19	bioY	-	-	S	ko:K03523	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	BioY family
PLIICNAG_01526	9.53e-286	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
PLIICNAG_01527	4.13e-24	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
PLIICNAG_01529	2.21e-46	-	-	-	-	-	-	-	-
PLIICNAG_01531	2.8e-169	yycF	-	-	K	ko:K07668	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	response regulator
PLIICNAG_01532	0.0	vicK	2.7.13.3	-	T	ko:K07652	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
PLIICNAG_01533	8.07e-314	yycH	-	-	S	-	-	-	YycH protein
PLIICNAG_01534	1.18e-188	yycI	-	-	S	-	-	-	YycH protein
PLIICNAG_01535	2.14e-191	vicX	3.1.26.11	-	S	ko:K00784	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	domain protein
PLIICNAG_01536	1.18e-274	htrA	3.4.21.107	-	O	ko:K04771	ko01503,ko02020,map01503,map02020	ko00000,ko00001,ko00002,ko01000,ko01002,ko03110	serine protease
PLIICNAG_01537	2.23e-117	rlmH	2.1.1.177	-	J	ko:K00783	-	ko00000,ko01000,ko03009	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
PLIICNAG_01538	3.99e-49	-	-	-	K	-	-	-	Helix-turn-helix domain
PLIICNAG_01539	2.42e-30	-	-	-	K	-	-	-	Helix-turn-helix domain
PLIICNAG_01541	4.09e-103	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter
PLIICNAG_01542	3.18e-50	-	-	-	-	ko:K01992	-	ko00000,ko00002,ko02000	-
PLIICNAG_01543	6.21e-41	axe	-	-	K	ko:K21498	-	ko00000,ko02048	Helix-turn-helix XRE-family like proteins
PLIICNAG_01544	2.78e-222	pepI	3.4.11.5	-	E	ko:K01259	ko00330,map00330	ko00000,ko00001,ko01000,ko01002	Releases the N-terminal proline from various substrates
PLIICNAG_01545	5.2e-125	-	-	-	P	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Cobalt transport protein
PLIICNAG_01546	9.26e-317	-	-	-	S	ko:K16786,ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
PLIICNAG_01547	1e-220	-	-	-	K	-	-	-	helix_turn_helix, arabinose operon control protein
PLIICNAG_01548	1.3e-215	-	-	-	L	ko:K07497	-	ko00000	hmm pf00665
PLIICNAG_01549	2.39e-147	-	-	-	L	-	-	-	Helix-turn-helix domain
PLIICNAG_01550	1.92e-206	htpX	-	-	O	ko:K03799	-	ko00000,ko00002,ko01000,ko01002	Belongs to the peptidase M48B family
PLIICNAG_01551	1.43e-125	lemA	-	-	S	ko:K03744	-	ko00000	LemA family
PLIICNAG_01552	7.23e-244	ysdE	-	-	P	-	-	-	Citrate transporter
PLIICNAG_01553	1.8e-91	-	-	-	S	-	-	-	Iron-sulphur cluster biosynthesis
PLIICNAG_01554	0.0	glpQ	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	Membrane domain of glycerophosphoryl diester phosphodiesterase
PLIICNAG_01555	9.69e-25	-	-	-	-	-	-	-	-
PLIICNAG_01556	4.03e-157	yfbR	-	-	S	ko:K07023	-	ko00000	HD containing hydrolase-like enzyme
PLIICNAG_01557	6.56e-205	-	-	-	L	-	-	-	HNH nucleases
PLIICNAG_01558	3.02e-175	glnQ	-	-	E	ko:K17076	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
PLIICNAG_01559	0.0	XK27_05795	-	-	P	ko:K17073,ko:K17074	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
PLIICNAG_01560	1.71e-156	yxlJ	3.2.2.21	-	L	ko:K03652	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Belongs to the DNA glycosylase MPG family
PLIICNAG_01561	6.81e-83	yeaO	-	-	S	-	-	-	Protein of unknown function, DUF488
PLIICNAG_01562	4.26e-160	terC	-	-	P	-	-	-	Integral membrane protein TerC family
PLIICNAG_01563	1.71e-119	adaB	2.1.1.63	-	L	ko:K00567,ko:K10778,ko:K13531	-	ko00000,ko01000,ko03000,ko03400	6-O-methylguanine DNA methyltransferase, DNA binding domain
PLIICNAG_01564	1.14e-166	cobB	-	-	K	ko:K12410	-	ko00000,ko01000	SIR2 family
PLIICNAG_01565	1.14e-111	-	-	-	-	-	-	-	-
PLIICNAG_01566	0.0	cls	-	-	I	ko:K06131	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PLIICNAG_01567	3.27e-228	-	-	-	S	-	-	-	Alpha/beta hydrolase of unknown function (DUF915)
PLIICNAG_01568	4.17e-187	rnhA	3.1.26.4	-	L	ko:K03469	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PLIICNAG_01569	2.84e-184	-	-	-	S	-	-	-	Protein of unknown function (DUF1002)
PLIICNAG_01570	3.74e-204	epsV	-	-	S	-	-	-	glycosyl transferase family 2
PLIICNAG_01571	1.07e-163	-	-	-	S	-	-	-	Alpha/beta hydrolase family
PLIICNAG_01572	5.93e-149	-	-	-	GM	-	-	-	NmrA-like family
PLIICNAG_01573	6.35e-73	-	-	-	-	-	-	-	-
PLIICNAG_01574	8.37e-232	prs2	2.7.6.1	-	F	ko:K00948	ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PLIICNAG_01575	9e-156	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PLIICNAG_01576	4.16e-173	-	-	-	-	-	-	-	-
PLIICNAG_01577	0.0	glnPH2	-	-	P	ko:K02029,ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter permease
PLIICNAG_01578	3.68e-173	glnQ	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
PLIICNAG_01579	2.69e-295	-	-	-	S	-	-	-	Cysteine-rich secretory protein family
PLIICNAG_01580	7.25e-265	ddl	6.3.2.4	-	F	ko:K01921	ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Belongs to the D-alanine--D-alanine ligase family
PLIICNAG_01581	6.11e-152	-	-	-	-	-	-	-	-
PLIICNAG_01582	3.81e-255	yibE	-	-	S	-	-	-	overlaps another CDS with the same product name
PLIICNAG_01583	1.35e-167	yibF	-	-	S	-	-	-	overlaps another CDS with the same product name
PLIICNAG_01584	4.03e-200	-	-	-	I	-	-	-	alpha/beta hydrolase fold
PLIICNAG_01585	0.0	-	-	-	G	-	-	-	Belongs to the glycosyl hydrolase 31 family
PLIICNAG_01586	8.67e-111	ntd	2.4.2.6	-	F	ko:K08728	ko00240,map00240	ko00000,ko00001,ko01000	Nucleoside
PLIICNAG_01587	2.55e-111	-	2.7.1.200, 2.7.1.204	-	G	ko:K02773,ko:K20112	ko00052,ko01100,ko02060,map00052,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PLIICNAG_01588	8.38e-190	-	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Tyrosine phosphatase family
PLIICNAG_01589	1.6e-113	usp5	-	-	T	-	-	-	universal stress protein
PLIICNAG_01591	1.53e-198	phnD	-	-	P	ko:K02044	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Phosphonate ABC transporter
PLIICNAG_01592	2.12e-178	phnC	3.6.3.28	-	P	ko:K02041	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
PLIICNAG_01593	3.54e-165	phnB	-	-	P	ko:K02042	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PLIICNAG_01594	4.13e-187	-	-	-	P	ko:K02042	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PLIICNAG_01595	7.07e-38	tnpR	-	-	L	-	-	-	Resolvase, N terminal domain
PLIICNAG_01596	9.3e-56	ymdB	-	-	S	-	-	-	Macro domain protein
PLIICNAG_01597	5.67e-197	malG	-	-	P	ko:K15772	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
PLIICNAG_01598	0.0	malF	-	-	P	ko:K15771	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PLIICNAG_01599	1.29e-280	malE	-	-	G	ko:K15770	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding protein
PLIICNAG_01600	3.72e-262	msmX	-	-	P	ko:K10112	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
PLIICNAG_01601	2.04e-150	pgmB	5.4.2.6	-	S	ko:K01838	ko00500,map00500	ko00000,ko00001,ko01000	beta-phosphoglucomutase
PLIICNAG_01602	0.0	mapA	2.4.1.8	GH65	G	ko:K00691	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	hydrolase, family 65, central catalytic
PLIICNAG_01603	0.0	nplT	3.2.1.133, 3.2.1.135, 3.2.1.54	GH13	G	ko:K01208	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 13 family
PLIICNAG_01604	0.0	malA1	3.2.1.10, 3.2.1.20	GH13,GH31	G	ko:K01182,ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Alpha amylase, catalytic domain
PLIICNAG_01605	4.29e-55	ackA	2.7.2.1	-	F	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PLIICNAG_01606	4.19e-18	-	-	-	-	-	-	-	-
PLIICNAG_01607	2.54e-30	-	-	-	K	ko:K07726	-	ko00000,ko03000	Helix-turn-helix XRE-family like proteins
PLIICNAG_01608	1.78e-33	-	-	-	S	-	-	-	RelE toxin of RelE / RelB toxin-antitoxin system
PLIICNAG_01610	1.7e-206	-	5.2.1.8	-	M	ko:K07533	-	ko00000,ko01000,ko03110	Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
PLIICNAG_01611	0.0	prtB	3.4.21.96	-	O	ko:K01361	-	ko00000,ko01000,ko01002,ko03110	Belongs to the peptidase S8 family
PLIICNAG_01612	5.43e-163	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
PLIICNAG_01613	1.26e-127	-	-	-	L	-	-	-	Integrase
PLIICNAG_01614	2.29e-187	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
PLIICNAG_01615	4.77e-38	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
PLIICNAG_01616	3.45e-55	-	1.1.1.29	-	CH	ko:K00018	ko00260,ko00630,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,map00260,map00630,map00680,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PLIICNAG_01617	4.7e-62	-	-	-	-	-	-	-	-
PLIICNAG_01618	4.72e-72	-	-	-	-	-	-	-	-
PLIICNAG_01619	2.85e-81	ptsG	2.7.1.199, 2.7.1.208	-	G	ko:K02777,ko:K02778,ko:K02779,ko:K02790,ko:K02791	ko00010,ko00500,ko00520,ko02026,ko02060,ko05111,map00010,map00500,map00520,map02026,map02060,map05111	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system, EIIB
PLIICNAG_01620	1.1e-277	-	-	-	EGP	ko:K08196,ko:K08369	-	ko00000,ko02000	Major Facilitator
PLIICNAG_01621	0.0	XK27_00340	3.1.3.5	-	F	ko:K01081	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the 5'-nucleotidase family
PLIICNAG_01622	0.0	oppA	-	-	E	ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter
PLIICNAG_01623	2.11e-271	-	-	-	Q	-	-	-	Imidazolonepropionase and related amidohydrolases
PLIICNAG_01624	6.96e-81	psiE	-	-	S	ko:K13256	-	ko00000	Phosphate-starvation-inducible E
PLIICNAG_01626	4.02e-283	galK	2.7.1.6	-	F	ko:K00849	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
PLIICNAG_01627	0.0	galT	2.7.7.12	-	G	ko:K00965	ko00052,ko00520,ko01100,ko04917,map00052,map00520,map01100,map04917	ko00000,ko00001,ko00002,ko01000	UDP-glucose--hexose-1-phosphate uridylyltransferase
PLIICNAG_01628	1.6e-251	galM	5.1.3.3	-	G	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the interconversion of alpha and beta anomers of maltose
PLIICNAG_01629	3.18e-37	-	-	-	S	-	-	-	Domain of unknown function (DUF4411)
PLIICNAG_01630	1.77e-282	-	-	-	E	-	-	-	IrrE N-terminal-like domain
PLIICNAG_01632	0.0	carB	6.3.5.5	-	F	ko:K01955	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthase
PLIICNAG_01633	3.47e-268	carA	6.3.5.5	-	F	ko:K01956	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthetase glutamine chain
PLIICNAG_01634	5.38e-309	pyrC	3.5.2.3	-	F	ko:K01465	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
PLIICNAG_01635	2.7e-232	pyrB	2.1.3.2	-	F	ko:K00609	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the ATCase OTCase family
PLIICNAG_01636	5.63e-120	pyrR	2.4.2.9	-	F	ko:K02825	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000,ko03000	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
PLIICNAG_01637	1.03e-210	pyrD	1.3.1.14, 1.3.98.1	-	F	ko:K00226,ko:K17828	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
PLIICNAG_01638	1.08e-155	pyrF	4.1.1.23	-	F	ko:K01591	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
PLIICNAG_01639	5.51e-147	pyrE	2.4.2.10	-	F	ko:K00762	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
PLIICNAG_01640	2.1e-151	hlyIII	-	-	S	ko:K11068	-	ko00000,ko02042	protein, hemolysin III
PLIICNAG_01641	4.78e-190	degV3	-	-	S	-	-	-	Uncharacterised protein, DegV family COG1307
PLIICNAG_01642	9.85e-49	yozE	-	-	S	-	-	-	Belongs to the UPF0346 family
PLIICNAG_01643	0.0	nhaP4	-	-	P	ko:K03316	-	ko00000	Sodium proton antiporter
PLIICNAG_01644	1.3e-201	rbgA	-	-	S	ko:K14540	-	ko00000,ko03009	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
PLIICNAG_01645	3.81e-173	rnhB	3.1.26.4	-	L	ko:K03470	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PLIICNAG_01646	8.1e-200	dprA	-	-	LU	ko:K04096	-	ko00000	DNA protecting protein DprA
PLIICNAG_01647	0.0	topA	5.99.1.2	-	L	ko:K03168	-	ko00000,ko01000,ko03032,ko03400	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
PLIICNAG_01648	3.98e-313	trmFO	2.1.1.74	-	J	ko:K04094	-	ko00000,ko01000,ko03016,ko03036	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
PLIICNAG_01649	3.92e-217	xerC	-	-	D	ko:K03733,ko:K04763	-	ko00000,ko03036	Phage integrase, N-terminal SAM-like domain
PLIICNAG_01650	5.68e-117	hslV	3.4.25.2	-	O	ko:K01419	-	ko00000,ko01000,ko01002	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
PLIICNAG_01651	3.67e-310	hslU	-	-	O	ko:K03667	-	ko00000,ko03110	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
PLIICNAG_01652	9e-226	lacX	5.1.3.3	-	G	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Aldose 1-epimerase
PLIICNAG_01653	0.0	thrS	6.1.1.3	-	J	ko:K01868	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
PLIICNAG_01654	1.03e-212	dnaI	-	-	L	ko:K11144	-	ko00000,ko03032	Primosomal protein DnaI
PLIICNAG_01655	1.76e-314	dnaB2	-	-	L	ko:K03346	-	ko00000,ko03032	Replication initiation and membrane attachment
PLIICNAG_01656	5.46e-108	nrdR	-	-	K	ko:K07738	-	ko00000,ko03000	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
PLIICNAG_01657	8.44e-134	coaE	2.7.1.24	-	F	ko:K00859	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
PLIICNAG_01658	3.73e-202	fpg	3.2.2.23, 4.2.99.18	-	L	ko:K10563	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
PLIICNAG_01659	0.0	polA	2.7.7.7	-	L	ko:K02335	ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440	ko00000,ko00001,ko01000,ko03032,ko03400	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
PLIICNAG_01660	1.4e-12	-	-	-	-	-	-	-	-
PLIICNAG_01662	7.13e-100	-	-	-	-	-	-	-	-
PLIICNAG_01663	9.23e-79	-	-	-	-	-	-	-	-
PLIICNAG_01664	1.51e-122	-	-	-	-	-	-	-	-
PLIICNAG_01665	1.48e-238	-	-	-	S	-	-	-	Domain of unknown function (DUF389)
PLIICNAG_01666	2.61e-36	astA	2.8.2.22	-	M	ko:K01023	-	ko00000,ko01000	Arylsulfotransferase Ig-like domain
PLIICNAG_01667	1.2e-192	astA	2.8.2.22	-	M	ko:K01023	-	ko00000,ko01000	Arylsulfotransferase Ig-like domain
PLIICNAG_01668	2.51e-43	astA	2.8.2.22	-	M	ko:K01023	-	ko00000,ko01000	Arylsulfotransferase Ig-like domain
PLIICNAG_01669	4.65e-71	infC	-	-	J	ko:K02520	-	ko00000,ko03012,ko03029	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
PLIICNAG_01670	2.77e-37	rpmI	-	-	J	ko:K02916	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL35 family
PLIICNAG_01671	1.23e-75	rplT	-	-	J	ko:K02887	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
PLIICNAG_01672	1.51e-121	yqeG	-	-	S	ko:K07015	-	ko00000	HAD phosphatase, family IIIA
PLIICNAG_01673	5.56e-269	yqeH	-	-	S	ko:K06948	-	ko00000,ko03009	Ribosome biogenesis GTPase YqeH
PLIICNAG_01674	1.11e-156	nadD	2.7.7.18	-	H	ko:K00969	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
PLIICNAG_01675	9.6e-143	yqeK	-	-	H	-	-	-	Hydrolase, HD family
PLIICNAG_01676	3.58e-78	rsfS	-	-	J	ko:K09710	-	ko00000,ko03009	Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
PLIICNAG_01677	1.09e-273	ylbM	-	-	S	-	-	-	Belongs to the UPF0348 family
PLIICNAG_01678	2.47e-125	ylbN	-	-	S	ko:K07040	-	ko00000	Uncharacterized ACR, COG1399
PLIICNAG_01679	2.12e-164	csrR	-	-	K	-	-	-	response regulator
PLIICNAG_01680	0.0	arlS	2.7.13.3	-	T	ko:K18940	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
PLIICNAG_01681	6.82e-34	-	-	-	S	-	-	-	Uncharacterised protein family (UPF0236)
PLIICNAG_01682	4.39e-177	yxeH	-	-	S	-	-	-	hydrolase
PLIICNAG_01683	2.66e-48	-	-	-	S	-	-	-	Enterocin A Immunity
PLIICNAG_01684	1.55e-282	psd	4.1.1.65	-	I	ko:K01613	ko00564,ko01100,ko01110,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Belongs to the phosphatidylserine decarboxylase family
PLIICNAG_01685	7.41e-65	pspC	-	-	KT	ko:K03973	-	ko00000,ko02048,ko03000	PspC domain
PLIICNAG_01687	1.05e-309	dacA	3.4.16.4	-	M	ko:K07258	ko00550,ko01100,map00550,map01100	ko00000,ko00001,ko01000,ko01002,ko01011	Belongs to the peptidase S11 family
PLIICNAG_01688	4.31e-195	nnrD	4.2.1.136, 5.1.99.6	-	H	ko:K17758,ko:K17759	-	ko00000,ko01000	Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
PLIICNAG_01689	9.06e-159	-	-	-	M	-	-	-	ErfK YbiS YcfS YnhG
PLIICNAG_01690	2.93e-119	-	-	-	K	-	-	-	Virulence activator alpha C-term
PLIICNAG_01691	1.03e-133	padC	-	-	Q	ko:K13727	-	ko00000,ko01000	Phenolic acid decarboxylase
PLIICNAG_01692	2.74e-145	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
PLIICNAG_01693	5.02e-20	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
PLIICNAG_01694	0.0	argS	6.1.1.19	-	J	ko:K01887	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Arginyl-tRNA synthetase
PLIICNAG_01695	5.16e-218	fba	4.1.2.13, 4.1.2.29	-	G	ko:K01624,ko:K03339	ko00010,ko00030,ko00051,ko00562,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00562,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Fructose-1,6-bisphosphate aldolase, class II
PLIICNAG_01696	5.94e-118	-	-	-	L	-	-	-	NUDIX domain
PLIICNAG_01697	3.27e-53	-	-	-	-	-	-	-	-
PLIICNAG_01698	1.36e-41	-	-	-	-	-	-	-	-
PLIICNAG_01700	1.05e-220	-	-	-	V	-	-	-	ABC transporter transmembrane region
PLIICNAG_01702	1.26e-59	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
PLIICNAG_01706	5.12e-145	-	-	-	S	-	-	-	SLAP domain
PLIICNAG_01707	0.0	yybT	-	-	T	-	-	-	signaling protein consisting of a modified GGDEF domain and a DHH domain
PLIICNAG_01708	7.8e-97	rplI	-	-	J	ko:K02939	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to the 23S rRNA
PLIICNAG_01709	0.0	dnaB	3.6.4.12	-	L	ko:K02314	ko03030,ko04112,map03030,map04112	ko00000,ko00001,ko01000,ko03032	Participates in initiation and elongation during chromosome replication
PLIICNAG_01710	4.01e-209	phnD	-	-	P	ko:K02044	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter, phosphonate, periplasmic substrate-binding protein
PLIICNAG_01711	2.4e-223	degV1	-	-	S	-	-	-	DegV family
PLIICNAG_01712	2.99e-216	scrK	2.7.1.4	-	GK	ko:K00847	ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100	ko00000,ko00001,ko01000	ROK family
PLIICNAG_01713	0.0	hsdM	2.1.1.72	-	V	ko:K03427	-	ko00000,ko01000,ko02048	type I restriction-modification system
PLIICNAG_01714	0.0	hsdR	3.1.21.3	-	V	ko:K01153	-	ko00000,ko01000,ko02048	Subunit R is required for both nuclease and ATPase activities, but not for modification
PLIICNAG_01715	5.14e-24	-	-	-	-	-	-	-	-
PLIICNAG_01716	5.17e-69	-	-	-	S	-	-	-	SIR2-like domain
PLIICNAG_01717	2.06e-169	-	-	-	S	-	-	-	Domain of unknown function DUF87
PLIICNAG_01718	2.32e-17	tnpA1	-	-	L	-	-	-	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
PLIICNAG_01719	1.39e-106	-	-	-	L	-	-	-	Transposase DDE domain
PLIICNAG_01720	1.51e-77	-	-	-	L	-	-	-	Putative transposase of IS4/5 family (DUF4096)
PLIICNAG_01721	7.9e-13	yhxD	-	-	IQ	-	-	-	Enoyl-(Acyl carrier protein) reductase
PLIICNAG_01725	2.93e-127	ybcH	-	-	D	ko:K06889	-	ko00000	Alpha beta
PLIICNAG_01726	0.0	rumA_1	2.1.1.190, 2.1.1.35	-	J	ko:K00557,ko:K03215	-	ko00000,ko01000,ko03009,ko03016	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PLIICNAG_01727	2.89e-185	recX	-	-	S	ko:K03565	-	ko00000,ko03400	Regulatory protein RecX
PLIICNAG_01728	1.05e-112	-	-	-	-	-	-	-	-
PLIICNAG_01729	2.6e-96	-	-	-	-	-	-	-	-
PLIICNAG_01730	4.02e-204	hlyX	-	-	S	ko:K03699	-	ko00000,ko02042	Transporter associated domain
PLIICNAG_01731	0.0	prfC	-	-	J	ko:K02837	-	ko00000,ko03012	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
PLIICNAG_01732	4.17e-60	XK27_09445	-	-	S	-	-	-	Domain of unknown function (DUF1827)
PLIICNAG_01733	0.0	clpE	-	-	O	ko:K03697	-	ko00000,ko03110	Belongs to the ClpA ClpB family
PLIICNAG_01734	5.25e-37	-	-	-	-	-	-	-	-
PLIICNAG_01735	1.29e-54	ptsH	-	-	G	ko:K11189	-	ko00000,ko02000	phosphocarrier protein HPR
PLIICNAG_01736	0.0	ptsI	2.7.3.9	-	G	ko:K08483	ko02060,map02060	ko00000,ko00001,ko01000,ko02000	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
PLIICNAG_01737	1.08e-87	spxA	-	-	K	ko:K16509	-	ko00000	Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
PLIICNAG_01738	3.26e-172	mecA	-	-	NOT	ko:K16511	-	ko00000	Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
PLIICNAG_01739	1.53e-203	coiA	-	-	S	ko:K06198	-	ko00000	Competence protein
PLIICNAG_01740	5.3e-144	yjbH	-	-	Q	-	-	-	Thioredoxin
PLIICNAG_01741	8.48e-145	-	-	-	S	-	-	-	CYTH
PLIICNAG_01742	1.15e-145	yjbM	2.7.6.5	-	S	ko:K07816	ko00230,map00230	ko00000,ko00001,ko01000	RelA SpoT domain protein
PLIICNAG_01743	4.35e-198	nadK	2.7.1.23	-	F	ko:K00858	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
PLIICNAG_01744	2.36e-216	rluD2	5.4.99.23	-	J	ko:K06180	-	ko00000,ko01000,ko03009	Responsible for synthesis of pseudouridine from uracil
PLIICNAG_01745	0.0	mycA	4.2.1.53	-	S	ko:K10254	-	ko00000,ko01000	Myosin-crossreactive antigen
PLIICNAG_01746	5.71e-38	-	-	-	S	-	-	-	SNARE associated Golgi protein
PLIICNAG_01747	6.52e-59	-	-	-	S	-	-	-	SNARE associated Golgi protein
PLIICNAG_01748	1.75e-256	pgl	3.1.1.31	-	G	ko:K07404	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Lactonase, 7-bladed beta-propeller
PLIICNAG_01749	0.0	pacL	-	-	P	-	-	-	Cation transporter/ATPase, N-terminus
PLIICNAG_01750	1.35e-85	srlB	2.7.1.198	-	G	ko:K02781	ko00051,ko02060,map00051,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system glucitol/sorbitol-specific IIA component
PLIICNAG_01751	8.55e-270	XK27_05220	-	-	S	-	-	-	AI-2E family transporter
PLIICNAG_01752	1.23e-135	cspR	2.1.1.207	-	J	ko:K03216	-	ko00000,ko01000,ko03016	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
PLIICNAG_01753	4.46e-90	WQ51_03320	-	-	S	-	-	-	Protein of unknown function (DUF1149)
PLIICNAG_01754	0.0	ftsK	-	-	D	ko:K03466	-	ko00000,ko03036	Belongs to the FtsK SpoIIIE SftA family
PLIICNAG_01755	2.34e-288	ymfF	-	-	S	-	-	-	Peptidase M16 inactive domain protein
PLIICNAG_01756	6.17e-300	ymfH	-	-	S	-	-	-	Peptidase M16
PLIICNAG_01757	1.14e-170	fabG	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Enoyl-(Acyl carrier protein) reductase
PLIICNAG_01758	1.33e-186	ymfM	-	-	S	ko:K15539	-	ko00000	Helix-turn-helix domain
PLIICNAG_01759	3e-127	pgsA	2.7.8.5	-	I	ko:K00995	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
PLIICNAG_01760	8.88e-248	recA	-	-	L	ko:K03553	ko03440,map03440	ko00000,ko00001,ko00002,ko03400	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
PLIICNAG_01761	4.31e-286	rny	-	-	S	ko:K18682	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	Endoribonuclease that initiates mRNA decay
PLIICNAG_01762	3.21e-267	tagO	2.7.8.33, 2.7.8.35	-	M	ko:K02851	-	ko00000,ko01000,ko01003,ko01005	transferase
PLIICNAG_01763	2.4e-152	yvyE	3.4.13.9	-	S	ko:K01271	-	ko00000,ko01000,ko01002	YigZ family
PLIICNAG_01764	1.01e-310	comFA	-	-	L	ko:K02240	-	ko00000,ko00002,ko02044	Helicase C-terminal domain protein
PLIICNAG_01765	4.17e-172	comFC	-	-	S	ko:K02242	-	ko00000,ko00002,ko02044	Competence protein
PLIICNAG_01766	3.81e-123	hpf	-	-	J	ko:K05808	-	ko00000,ko03009	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
PLIICNAG_01767	0.0	secA	-	-	U	ko:K03070	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
PLIICNAG_01768	2.93e-236	prfB	-	-	J	ko:K02836	-	ko00000,ko03012	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
PLIICNAG_01769	9.21e-50	-	-	-	-	-	-	-	-
PLIICNAG_01770	5.87e-229	hprK	-	-	F	ko:K06023	-	ko00000,ko01000	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
PLIICNAG_01771	3.9e-191	lgt	-	-	M	ko:K13292	-	ko00000,ko01000	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
PLIICNAG_01772	3.46e-241	gpsA	1.1.1.94	-	I	ko:K00057	ko00564,ko01110,map00564,map01110	ko00000,ko00001,ko01000	Glycerol-3-phosphate dehydrogenase
PLIICNAG_01773	1.04e-125	-	-	-	S	ko:K06910	-	ko00000	Phosphatidylethanolamine-binding protein
PLIICNAG_01774	0.0	-	-	-	S	-	-	-	Putative threonine/serine exporter
PLIICNAG_01775	2.03e-222	citR	-	-	K	-	-	-	Putative sugar-binding domain
PLIICNAG_01776	3.96e-67	-	-	-	-	-	-	-	-
PLIICNAG_01777	4.27e-22	-	-	-	-	-	-	-	-
PLIICNAG_01778	1.64e-86	-	-	-	S	-	-	-	Domain of unknown function DUF1828
PLIICNAG_01779	1.22e-121	-	-	-	S	ko:K16924	-	ko00000,ko00002,ko02000	UPF0397 protein
PLIICNAG_01780	0.0	ykoD	-	-	P	ko:K16786,ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
PLIICNAG_01781	4.46e-190	cbiQ	-	-	P	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	cobalt transport
PLIICNAG_01782	4.84e-23	-	-	-	-	-	-	-	-
PLIICNAG_01783	7.19e-93	ytwI	-	-	S	-	-	-	Protein of unknown function (DUF441)
PLIICNAG_01784	5.87e-99	M1-431	-	-	S	-	-	-	Protein of unknown function (DUF1706)
PLIICNAG_01785	6.35e-175	-	-	-	-	-	-	-	-
PLIICNAG_01787	4.63e-15	-	-	-	-	-	-	-	-
PLIICNAG_01788	1.15e-142	ackA	2.7.2.1	-	H	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PLIICNAG_01789	1.68e-225	yvdE	-	-	K	-	-	-	helix_turn _helix lactose operon repressor
PLIICNAG_01790	1.91e-190	-	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Tyrosine phosphatase family
PLIICNAG_01791	3e-289	glpK	2.7.1.30	-	F	ko:K00864	ko00561,ko01100,ko03320,ko04626,map00561,map01100,map03320,map04626	ko00000,ko00001,ko01000,ko04147	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
PLIICNAG_01792	1.99e-194	thiD	2.7.1.49, 2.7.4.7	-	H	ko:K00941	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Phosphomethylpyrimidine kinase
PLIICNAG_01794	1.29e-169	cobQ	-	-	S	ko:K07009	-	ko00000	glutamine amidotransferase
PLIICNAG_01795	1.38e-108	-	-	-	M	-	-	-	NlpC/P60 family
PLIICNAG_01796	1.57e-189	-	-	-	EG	-	-	-	EamA-like transporter family
PLIICNAG_01797	8.31e-141	-	-	-	-	-	-	-	-
PLIICNAG_01798	2.61e-101	-	-	-	-	-	-	-	-
PLIICNAG_01799	1.69e-234	-	-	-	S	-	-	-	DUF218 domain
PLIICNAG_01800	4.09e-99	yheS_2	-	-	S	ko:K18231,ko:K19349	ko02010,map02010	br01600,ko00000,ko00001,ko01504,ko02000	ATPases associated with a variety of cellular activities
PLIICNAG_01801	6.23e-244	galE	5.1.3.2	-	M	ko:K01784	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the NAD(P)-dependent epimerase dehydratase family
PLIICNAG_01802	4.53e-240	lacM	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	beta-galactosidase
PLIICNAG_01803	0.0	lacL	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 2 family
PLIICNAG_01804	1.25e-241	lacR	-	-	K	ko:K02529	-	ko00000,ko03000	Transcriptional regulator
PLIICNAG_01805	1.81e-29	lacS	-	-	G	ko:K11104,ko:K16209	-	ko00000,ko02000	Transporter
PLIICNAG_01806	2.5e-59	lacS	-	-	G	ko:K11104,ko:K16209	-	ko00000,ko02000	Transporter
PLIICNAG_01807	2.15e-183	lacS	-	-	G	ko:K11104,ko:K16209	-	ko00000,ko02000	Transporter
PLIICNAG_01808	0.0	lacS	-	-	G	ko:K11104,ko:K16209	-	ko00000,ko02000	Transporter
PLIICNAG_01809	6.04e-113	lacZ	3.2.1.23	-	G	ko:K12308	ko00052,map00052	ko00000,ko00001,ko01000	-beta-galactosidase
PLIICNAG_01810	2.71e-53	lacZ	3.2.1.23	-	G	ko:K12308	ko00052,map00052	ko00000,ko00001,ko01000	-beta-galactosidase
PLIICNAG_01811	9.7e-133	-	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase
PLIICNAG_01812	7.88e-219	coaA	2.7.1.33	-	F	ko:K00867	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Pantothenic acid kinase
PLIICNAG_01813	5.59e-134	efp	-	-	J	ko:K02356	-	ko00000,ko03012	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
PLIICNAG_01814	7.39e-311	-	-	-	G	ko:K02027	-	ko00000,ko00002,ko02000	Bacterial extracellular solute-binding protein
PLIICNAG_01815	1.81e-88	-	-	-	S	-	-	-	Peptidase propeptide and YPEB domain
PLIICNAG_01816	1.82e-18	-	-	-	S	-	-	-	Peptidase propeptide and YPEB domain
PLIICNAG_01817	5.44e-88	yybA	-	-	K	-	-	-	Transcriptional regulator
PLIICNAG_01818	4.17e-111	XK27_03150	2.3.1.57	-	K	ko:K22441	-	ko00000,ko01000	Acetyltransferase (GNAT) domain
PLIICNAG_01819	5.86e-106	-	-	-	S	-	-	-	Peptidase propeptide and YPEB domain
PLIICNAG_01820	2.65e-123	-	-	-	F	-	-	-	Nucleoside 2-deoxyribosyltransferase
PLIICNAG_01821	2.42e-238	add	3.5.4.2, 3.5.4.4	-	F	ko:K01488,ko:K02029,ko:K21053	ko00230,ko01100,ko05340,map00230,map01100,map05340	ko00000,ko00001,ko00002,ko01000,ko02000	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
PLIICNAG_01822	2.91e-229	pepR	3.4.11.5	-	E	ko:K01259	ko00330,map00330	ko00000,ko00001,ko01000,ko01002	Releases the N-terminal proline from various substrates
PLIICNAG_01823	0.0	-	-	-	V	-	-	-	ABC transporter transmembrane region
PLIICNAG_01824	1.26e-117	-	-	-	-	-	-	-	-
PLIICNAG_01827	4.97e-250	metE	2.1.1.14	-	E	ko:K00549	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	methionine synthase, vitamin-B12 independent
PLIICNAG_01828	2.3e-115	luxS	4.4.1.21	-	H	ko:K07173	ko00270,ko01100,ko01230,ko02024,ko02026,ko05111,map00270,map01100,map01230,map02024,map02026,map05111	ko00000,ko00001,ko00002,ko01000	Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
PLIICNAG_01829	0.0	potE	-	-	E	-	-	-	Amino Acid
PLIICNAG_01830	3.43e-51	-	-	-	-	-	-	-	-
PLIICNAG_01831	1.06e-73	-	-	-	-	-	-	-	-
PLIICNAG_01832	3.97e-109	-	-	-	-	-	-	-	-
PLIICNAG_01833	8.64e-49	-	-	-	-	-	-	-	-
PLIICNAG_01834	7.13e-48	-	-	-	-	-	-	-	-
PLIICNAG_01835	2.48e-161	-	-	-	S	-	-	-	L-ascorbic acid biosynthetic process
PLIICNAG_01836	3.6e-92	-	-	-	O	-	-	-	OsmC-like protein
PLIICNAG_01837	7.52e-264	-	-	-	EGP	-	-	-	Major Facilitator Superfamily
PLIICNAG_01838	6.15e-49	sptS	-	-	T	-	-	-	Histidine kinase
PLIICNAG_01839	0.0	FbpA	-	-	K	-	-	-	Fibronectin-binding protein
PLIICNAG_01840	5.69e-86	-	-	-	-	-	-	-	-
PLIICNAG_01841	3.06e-205	-	-	-	S	-	-	-	EDD domain protein, DegV family
PLIICNAG_01842	5.71e-262	xerS	-	-	L	ko:K03733	-	ko00000,ko03036	Belongs to the 'phage' integrase family
PLIICNAG_01843	3.71e-95	-	-	-	-	-	-	-	-
PLIICNAG_01844	2.77e-114	flaR	-	-	F	-	-	-	topology modulation protein
PLIICNAG_01845	5.51e-140	XK27_00160	-	-	S	-	-	-	Domain of unknown function (DUF5052)
PLIICNAG_01846	1.1e-69	-	-	-	-	-	-	-	-
PLIICNAG_01847	5.82e-35	-	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
PLIICNAG_01848	2.49e-116	-	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
PLIICNAG_01849	7.24e-30	lysA2	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
PLIICNAG_01850	2.15e-48	-	-	-	S	-	-	-	Transglycosylase associated protein
PLIICNAG_01851	2.02e-65	-	-	-	L	-	-	-	PFAM transposase, IS4 family protein
PLIICNAG_01852	4.85e-288	mdtG2	-	-	EGP	ko:K08161	-	ko00000,ko02000	Transporter, major facilitator family protein
PLIICNAG_01853	8.23e-222	-	-	-	-	-	-	-	-
PLIICNAG_01854	2.79e-77	lysM	-	-	M	-	-	-	LysM domain
PLIICNAG_01856	0.0	pepN	3.4.11.2	-	E	ko:K01256	ko00480,ko01100,map00480,map01100	ko00000,ko00001,ko01000,ko01002	aminopeptidase
PLIICNAG_01857	0.0	dtpT	-	-	U	ko:K03305	-	ko00000	amino acid peptide transporter
PLIICNAG_01858	1.58e-33	-	-	-	-	-	-	-	-
PLIICNAG_01859	6.3e-238	-	-	-	S	-	-	-	Putative peptidoglycan binding domain
PLIICNAG_01860	3.36e-191	-	3.1.21.5	-	L	ko:K01156	-	ko00000,ko01000,ko02048	Type III restriction enzyme, res subunit
PLIICNAG_01861	4.13e-149	-	2.1.1.72	-	L	ko:K00571,ko:K07316	-	ko00000,ko01000,ko02048	DNA methylase
PLIICNAG_01864	1.8e-105	-	-	-	L	-	-	-	HNH endonuclease
PLIICNAG_01866	6.3e-80	-	-	-	K	-	-	-	IrrE N-terminal-like domain
PLIICNAG_01867	4.52e-101	smpB	-	-	J	ko:K03664	-	ko00000	the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
PLIICNAG_01868	0.0	rnr	-	-	J	ko:K12573	ko03018,map03018	ko00000,ko00001,ko01000,ko03016,ko03019	3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
PLIICNAG_01869	1.3e-40	secG	-	-	U	ko:K03075	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Preprotein translocase
PLIICNAG_01870	0.0	ltaS	2.7.8.20	-	M	ko:K19005	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
PLIICNAG_01871	4.59e-226	mprF	-	-	S	ko:K07027	-	ko00000,ko02000	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
PLIICNAG_01872	1.75e-254	cpoA	2.4.1.208	GT4	M	ko:K13677,ko:K13678	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000,ko01003	Glycosyltransferase, group 1 family protein
PLIICNAG_01873	1.19e-279	-	2.4.1.337	GT4	M	ko:K19002	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000,ko01003	Glycosyl transferase 4-like domain
PLIICNAG_01880	1.43e-106	-	-	-	S	-	-	-	Threonine/Serine exporter, ThrE
PLIICNAG_01881	1.14e-177	-	-	-	S	-	-	-	Putative threonine/serine exporter
PLIICNAG_01882	0.0	-	-	-	S	-	-	-	ABC transporter
PLIICNAG_01883	9.54e-74	-	-	-	-	-	-	-	-
PLIICNAG_01884	3.26e-128	rimL	-	-	J	ko:K03817	-	ko00000,ko01000,ko03009	Acetyltransferase (GNAT) domain
PLIICNAG_01885	1.53e-148	-	-	-	S	ko:K07150	-	ko00000	Protein of unknown function (DUF554)
PLIICNAG_01886	2.18e-286	brpA	-	-	K	-	-	-	Cell envelope-like function transcriptional attenuator common domain protein
PLIICNAG_01887	0.0	pepF	-	-	E	ko:K08602	-	ko00000,ko01000,ko01002	oligoendopeptidase F
PLIICNAG_01888	2.84e-30	-	-	-	S	-	-	-	Fic/DOC family
PLIICNAG_01889	1.95e-272	dnaJ	-	-	O	ko:K03686	-	ko00000,ko03029,ko03110	ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
PLIICNAG_01890	0.0	dnaK	-	-	O	ko:K04043	ko03018,ko04212,ko05152,map03018,map04212,map05152	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	Heat shock 70 kDa protein
PLIICNAG_01891	2.79e-115	grpE	-	-	O	ko:K03687	-	ko00000,ko03029,ko03110	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
PLIICNAG_01892	1.7e-237	hrcA	-	-	K	ko:K03705	-	ko00000,ko03000	Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
PLIICNAG_01893	3.03e-230	ribF	2.7.1.26, 2.7.7.2	-	H	ko:K11753	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Belongs to the ribF family
PLIICNAG_01894	2.35e-211	truB	5.4.99.25	-	J	ko:K03177,ko:K03483	-	ko00000,ko01000,ko03000,ko03016	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
PLIICNAG_01895	6.79e-79	rbfA	-	-	J	ko:K02834	-	ko00000,ko03009	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
PLIICNAG_01896	0.0	infB	-	-	J	ko:K02519	-	ko00000,ko03012,ko03029	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
PLIICNAG_01897	2.2e-62	ylxQ	-	-	J	-	-	-	ribosomal protein
PLIICNAG_01898	9.2e-64	ylxR	-	-	K	ko:K07742	-	ko00000	Protein of unknown function (DUF448)
PLIICNAG_01899	1.57e-262	nusA	-	-	K	ko:K02600	-	ko00000,ko03009,ko03021	Participates in both transcription termination and antitermination
PLIICNAG_01900	4.83e-108	rimP	-	-	J	ko:K09748	-	ko00000,ko03009	Required for maturation of 30S ribosomal subunits
PLIICNAG_01901	0.0	polC	2.7.7.7	-	L	ko:K03763	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PLIICNAG_01902	0.0	proS	6.1.1.15	-	J	ko:K01881	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
PLIICNAG_01903	9.05e-254	rseP	-	-	M	ko:K11749	ko02024,ko04112,map02024,map04112	ko00000,ko00001,ko01000,ko01002	zinc metalloprotease
PLIICNAG_01904	1.62e-189	cdsA	2.7.7.41	-	I	ko:K00981	ko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070	ko00000,ko00001,ko00002,ko01000	Belongs to the CDS family
PLIICNAG_01905	1.24e-175	uppS	2.5.1.31	-	H	ko:K00806	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
PLIICNAG_01906	2.46e-121	frr	-	-	J	ko:K02838	-	ko00000,ko03012	Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
PLIICNAG_01907	2.38e-167	pyrH	2.7.4.22	-	F	ko:K09903	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphorylation of UMP to UDP
PLIICNAG_01908	4.33e-236	tsf	-	-	J	ko:K02357	-	ko00000,ko03012,ko03029	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
PLIICNAG_01909	1.56e-180	rpsB	-	-	J	ko:K02967	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uS2 family
PLIICNAG_01910	1.82e-254	yabB	2.1.1.223	-	L	ko:K07461,ko:K15460	-	ko00000,ko01000,ko03016	Methyltransferase small domain
PLIICNAG_01911	1.46e-145	plsC	2.3.1.51	-	I	ko:K00655	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Acyltransferase
PLIICNAG_01912	9.19e-287	cfa	2.1.1.79	-	M	ko:K00574	-	ko00000,ko01000	cyclopropane-fatty-acyl-phospholipid synthase
PLIICNAG_01913	0.0	pepO	-	-	O	ko:K07386	-	ko00000,ko01000,ko01002	Peptidase family M13
PLIICNAG_01914	0.0	mdlB	-	-	V	ko:K06147,ko:K18890	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
PLIICNAG_01915	0.0	mdlA	-	-	V	ko:K06148,ko:K18889	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
PLIICNAG_01916	6.43e-41	XK26_06720	-	-	S	ko:K09976	-	ko00000	Uncharacterised protein family (UPF0154)
PLIICNAG_01917	5.3e-49	ynzC	-	-	S	-	-	-	UPF0291 protein
PLIICNAG_01918	1.99e-145	lexA	3.4.21.88	-	K	ko:K01356	-	ko00000,ko00002,ko01000,ko01002,ko03400	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
PLIICNAG_01919	3.17e-191	-	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase family
PLIICNAG_01920	2.31e-154	ung2	3.2.2.27	-	L	ko:K21929	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Uracil-DNA glycosylase
PLIICNAG_01921	2.28e-74	rplS	-	-	J	ko:K02884	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
PLIICNAG_01922	1.98e-174	trmD	2.1.1.228	-	J	ko:K00554	-	ko00000,ko01000,ko03016	Belongs to the RNA methyltransferase TrmD family
PLIICNAG_01923	2.34e-119	rimM	-	-	J	ko:K02860	-	ko00000,ko03009	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
PLIICNAG_01924	2.36e-60	rpsP	-	-	J	ko:K02959	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Belongs to the bacterial ribosomal protein bS16 family
PLIICNAG_01925	3.29e-290	ffh	3.6.5.4	-	U	ko:K03106	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko01000,ko02044	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
PLIICNAG_01926	1.17e-73	ylxM	-	-	S	ko:K09787	-	ko00000	Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
PLIICNAG_01927	8.23e-247	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
PLIICNAG_01928	0.0	ctrA	-	-	E	ko:K03294	-	ko00000	amino acid
PLIICNAG_01929	3.87e-60	-	-	-	-	-	-	-	-
PLIICNAG_01930	2.08e-267	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
PLIICNAG_01931	4.13e-148	glnP9	-	-	P	ko:K02029	-	ko00000,ko00002,ko02000	ABC transporter, permease protein
PLIICNAG_01932	9.35e-152	glnP7	-	-	P	ko:K02029	-	ko00000,ko00002,ko02000	ABC transporter permease
PLIICNAG_01933	1.97e-173	glnQ	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
PLIICNAG_01934	2.63e-207	cjaA	-	-	ET	ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter substrate-binding protein
PLIICNAG_01935	3.77e-68	yitW	-	-	S	-	-	-	Iron-sulfur cluster assembly protein
PLIICNAG_01936	3.15e-198	sdaAA	4.3.1.17	-	E	ko:K01752	ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230	ko00000,ko00001,ko01000	L-serine dehydratase, iron-sulfur-dependent, alpha subunit
PLIICNAG_01937	5.9e-97	-	4.3.1.17	-	E	ko:K01752	ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230	ko00000,ko00001,ko01000	Serine dehydratase beta chain
PLIICNAG_01938	6.01e-16	-	4.3.1.17	-	E	ko:K01752	ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230	ko00000,ko00001,ko01000	Serine dehydratase beta chain
PLIICNAG_01939	3.36e-61	-	-	-	-	-	-	-	-
PLIICNAG_01940	1.34e-124	-	-	-	S	-	-	-	Cysteine-rich secretory protein family
PLIICNAG_01941	8.46e-65	-	-	-	-	-	-	-	-
PLIICNAG_01942	2.65e-260	-	-	-	G	-	-	-	Major Facilitator Superfamily
PLIICNAG_01943	5.54e-69	-	-	-	-	-	-	-	-
PLIICNAG_01944	0.0	uvrA2	-	-	L	-	-	-	ABC transporter
PLIICNAG_01945	1.61e-118	-	-	-	L	ko:K07483,ko:K07497	-	ko00000	Helix-turn-helix domain
PLIICNAG_01946	7.93e-289	oxlT	-	-	P	ko:K08177	-	ko00000,ko02000	Major Facilitator Superfamily
PLIICNAG_01947	2.75e-91	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
PLIICNAG_01948	2.49e-276	yceI	-	-	EGP	ko:K08369	-	ko00000,ko02000	Major Facilitator
PLIICNAG_01949	1.02e-196	nadC	2.4.2.19	-	H	ko:K00767	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Quinolinate phosphoribosyl transferase, C-terminal domain
PLIICNAG_01950	2.64e-244	asnA	6.3.1.1	-	F	ko:K01914	ko00250,ko00460,ko01100,ko01110,ko01230,map00250,map00460,map01100,map01110,map01230	ko00000,ko00001,ko01000	aspartate--ammonia ligase
PLIICNAG_01951	1.83e-258	-	4.2.1.126	-	S	ko:K07106,ko:K09963	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Bacterial protein of unknown function (DUF871)
PLIICNAG_01954	2.73e-232	guaC	1.7.1.7	-	F	ko:K00364	ko00230,map00230	ko00000,ko00001,ko01000	Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
PLIICNAG_01955	1.14e-312	purA	6.3.4.4	-	F	ko:K01939	ko00230,ko00250,ko01100,map00230,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
PLIICNAG_01956	5.62e-310	purB	4.3.2.2	-	F	ko:K01756	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
PLIICNAG_01957	2.89e-75	-	-	-	-	-	-	-	-
PLIICNAG_01958	7.7e-110	-	-	-	-	-	-	-	-
PLIICNAG_01959	5.86e-39	yheS_2	-	-	S	ko:K18231,ko:K19349	ko02010,map02010	br01600,ko00000,ko00001,ko01504,ko02000	ATPases associated with a variety of cellular activities
PLIICNAG_01960	2.46e-29	-	-	-	S	-	-	-	Domain of unknown function (DUF4298)
PLIICNAG_01961	1.16e-96	-	-	-	L	-	-	-	Transposase DDE domain
PLIICNAG_01962	1.06e-44	-	-	-	L	-	-	-	DnaB-like helicase C terminal domain
PLIICNAG_01963	0.0	prtB	3.4.21.96	-	O	ko:K01361	-	ko00000,ko01000,ko01002,ko03110	Belongs to the peptidase S8 family
PLIICNAG_01964	2.11e-81	-	-	-	-	-	-	-	-
PLIICNAG_01965	3.03e-223	traA	-	-	L	-	-	-	MobA/MobL family
PLIICNAG_01966	1.67e-66	-	-	-	-	-	-	-	-
PLIICNAG_01967	9.4e-133	-	-	-	-	-	-	-	-
PLIICNAG_01968	1.49e-66	-	-	-	S	-	-	-	Cag pathogenicity island, type IV secretory system
PLIICNAG_01969	3.79e-71	-	-	-	-	-	-	-	-
PLIICNAG_01970	1.1e-152	-	-	-	-	-	-	-	-
PLIICNAG_01971	0.0	-	-	-	U	-	-	-	type IV secretory pathway VirB4
PLIICNAG_01972	6.61e-288	-	-	-	S	-	-	-	WXG100 protein secretion system (Wss), protein YukC
PLIICNAG_01973	5.01e-275	-	-	-	M	-	-	-	CHAP domain
PLIICNAG_01974	2.91e-65	-	-	-	-	-	-	-	-
PLIICNAG_01975	1.53e-102	-	-	-	C	-	-	-	Flavodoxin
PLIICNAG_01976	0.0	recQ	3.6.4.12	-	L	ko:K03654	ko03018,map03018	ko00000,ko00001,ko01000,ko03400	ATP-dependent DNA helicase RecQ
PLIICNAG_01977	5.26e-224	ktrB	-	-	P	ko:K03498	-	ko00000,ko02000	Potassium uptake protein
PLIICNAG_01978	2.2e-114	ktrA	-	-	P	ko:K03499	-	ko00000,ko02000	domain protein
PLIICNAG_01979	1.27e-313	ynbB	-	-	P	-	-	-	aluminum resistance
PLIICNAG_01980	0.0	speA	4.1.1.17, 4.1.1.18, 4.1.1.19	-	E	ko:K01581,ko:K01582,ko:K01585	ko00310,ko00330,ko00480,ko00960,ko01100,ko01110,ko01130,map00310,map00330,map00480,map00960,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Orn/Lys/Arg decarboxylase, C-terminal domain
PLIICNAG_01981	6.85e-26	adh1	1.1.1.1	-	E	ko:K00001	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	alcohol dehydrogenase
PLIICNAG_01982	8.38e-62	mepA	-	-	V	ko:K18908	-	ko00000,ko00002,ko01504,ko02000	MATE efflux family protein
PLIICNAG_01983	0.0	cadA	3.6.3.3, 3.6.3.5	-	P	ko:K01534	-	ko00000,ko01000	E1-E2 ATPase
PLIICNAG_01984	1.11e-45	-	-	-	C	-	-	-	Heavy-metal-associated domain
PLIICNAG_01985	4.77e-118	dpsB	-	-	P	-	-	-	Belongs to the Dps family
PLIICNAG_01986	1.37e-74	fnr	-	-	K	ko:K21562	-	ko00000,ko03000	Transcriptional regulator, Crp Fnr family
PLIICNAG_01987	4.31e-44	fnr	-	-	K	ko:K21562	-	ko00000,ko03000	Transcriptional regulator, Crp Fnr family
PLIICNAG_01988	3.49e-70	-	-	-	K	-	-	-	Acetyltransferase (GNAT) family
PLIICNAG_01989	1.11e-50	cbh	3.5.1.24	-	M	ko:K01442	ko00120,ko00121,ko01100,map00120,map00121,map01100	ko00000,ko00001,ko01000	Linear amide C-N hydrolase, choloylglycine hydrolase family protein
PLIICNAG_01990	6.75e-40	-	-	-	-	-	-	-	-
PLIICNAG_01991	3.21e-23	-	-	-	-	-	-	-	-
PLIICNAG_01992	0.0	-	-	-	S	-	-	-	Protein of unknown function DUF262
PLIICNAG_01993	1.6e-22	-	-	-	L	-	-	-	helicase
PLIICNAG_01994	1.77e-61	-	-	-	-	-	-	-	-
PLIICNAG_01995	9.15e-200	mutR	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
PLIICNAG_01996	1.09e-106	-	-	-	S	-	-	-	Putative adhesin
PLIICNAG_01997	0.0	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC transporter transmembrane region
PLIICNAG_01998	5.58e-63	yoeB	-	-	S	ko:K19158	-	ko00000,ko01000,ko02048	YoeB-like toxin of bacterial type II toxin-antitoxin system
PLIICNAG_01999	9e-66	-	-	-	D	ko:K19159	-	ko00000,ko02048	Antitoxin component of a toxin-antitoxin (TA) module
PLIICNAG_02000	1.83e-259	napA	-	-	P	-	-	-	Sodium/hydrogen exchanger family
PLIICNAG_02001	0.0	cadA	-	-	P	-	-	-	P-type ATPase
PLIICNAG_02002	1.15e-243	-	-	-	L	-	-	-	Psort location Cytoplasmic, score
PLIICNAG_02003	3.79e-26	-	-	-	-	-	-	-	-
PLIICNAG_02004	0.0	traI	5.99.1.2	-	L	ko:K03169	-	ko00000,ko01000,ko03032	C-terminal repeat of topoisomerase
PLIICNAG_02005	9.57e-87	-	-	-	-	-	-	-	-
PLIICNAG_02006	4.46e-194	-	-	-	-	-	-	-	-
PLIICNAG_02007	1.04e-80	-	-	-	-	-	-	-	-
PLIICNAG_02008	0.0	traK	-	-	U	ko:K03205	ko03070,map03070	ko00000,ko00001,ko00002,ko02044	TraM recognition site of TraD and TraG
PLIICNAG_02009	2.4e-107	-	-	-	-	-	-	-	-
PLIICNAG_02010	2.94e-28	-	-	-	-	-	-	-	-
PLIICNAG_02011	0.0	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
PLIICNAG_02012	0.0	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
PLIICNAG_02014	1.47e-21	XK27_01125	-	-	L	ko:K07484	-	ko00000	PFAM IS66 Orf2 family protein
PLIICNAG_02016	4.85e-20	-	-	-	S	-	-	-	Phage derived protein Gp49-like (DUF891)
PLIICNAG_02017	9.03e-55	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
PLIICNAG_02018	1.06e-57	-	-	-	-	-	-	-	-
PLIICNAG_02019	7.75e-29	-	-	-	T	ko:K07171	-	ko00000,ko01000,ko02048	PemK-like, MazF-like toxin of type II toxin-antitoxin system
PLIICNAG_02020	2.55e-82	-	-	-	L	-	-	-	Probable transposase
PLIICNAG_02021	1.12e-205	-	-	-	L	-	-	-	Probable transposase
PLIICNAG_02022	1.41e-18	-	-	-	S	-	-	-	Fic/DOC family
PLIICNAG_02023	1.25e-97	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
PLIICNAG_02024	9.17e-13	-	-	-	-	-	-	-	-
PLIICNAG_02025	1.74e-114	-	4.2.1.53	-	S	ko:K10254	-	ko00000,ko01000	Myosin-crossreactive antigen
PLIICNAG_02026	1.42e-215	-	4.2.1.53	-	S	ko:K10254	-	ko00000,ko01000	Myosin-crossreactive antigen
PLIICNAG_02027	1.85e-120	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PLIICNAG_02028	6.13e-315	qacA	-	-	EGP	-	-	-	Major Facilitator
PLIICNAG_02033	1.04e-124	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
PLIICNAG_02034	0.0	-	-	-	L	-	-	-	helicase activity
PLIICNAG_02035	9.11e-283	-	-	-	K	-	-	-	DNA binding
PLIICNAG_02036	0.0	res	3.1.21.5	-	L	ko:K01156	-	ko00000,ko01000,ko02048	Type III restriction enzyme, res subunit
PLIICNAG_02037	6.56e-317	mod	2.1.1.72	-	L	ko:K00571,ko:K07316	-	ko00000,ko01000,ko02048	DNA methylase
PLIICNAG_02038	5.95e-50	-	-	-	K	-	-	-	Cro/C1-type HTH DNA-binding domain
PLIICNAG_02039	6.6e-159	-	-	-	-	-	-	-	-
PLIICNAG_02042	9.99e-40	cspA	-	-	K	ko:K03704	-	ko00000,ko03000	Cold shock protein
PLIICNAG_02043	0.0	tnp2	-	-	L	-	-	-	PFAM Transposase, IS204 IS1001 IS1096 IS1165
PLIICNAG_02044	2.56e-220	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
PLIICNAG_02045	0.0	rumA_2	2.1.1.190	-	J	ko:K03215	-	ko00000,ko01000,ko03009	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PLIICNAG_02046	1.63e-313	nhaC	-	-	C	ko:K03315	-	ko00000,ko02000	Na H antiporter NhaC
PLIICNAG_02047	9.6e-73	-	-	-	-	-	-	-	-
PLIICNAG_02048	2.1e-153	ybhL	-	-	S	ko:K06890	-	ko00000	Belongs to the BI1 family
PLIICNAG_02049	5.53e-147	ybbB	-	-	S	-	-	-	Protein of unknown function (DUF1211)
PLIICNAG_02050	2.65e-217	dagK	2.7.1.107	-	G	ko:K07029	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko01000	Lipid kinase
PLIICNAG_02051	0.0	gatB	6.3.5.6, 6.3.5.7	-	J	ko:K02434	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PLIICNAG_02052	0.0	gatA	6.3.5.6, 6.3.5.7	-	J	ko:K02433	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
PLIICNAG_02053	2.94e-66	gatC	6.3.5.6, 6.3.5.7	-	J	ko:K02435	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PLIICNAG_02054	5.99e-266	camS	-	-	S	-	-	-	sex pheromone
PLIICNAG_02055	0.0	ligA	6.5.1.2	-	L	ko:K01972	ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430	ko00000,ko00001,ko01000,ko03032,ko03400	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
PLIICNAG_02056	0.0	pcrA	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	ATP-dependent DNA helicase
PLIICNAG_02057	3.4e-145	acmA	3.2.1.17, 3.2.1.96	-	NU	ko:K01185,ko:K01227	ko00511,map00511	ko00000,ko00001,ko01000	mannosyl-glycoprotein
PLIICNAG_02059	1.34e-113	ydcK	-	-	S	ko:K03095	-	ko00000	Belongs to the SprT family
PLIICNAG_02060	4.89e-176	-	-	-	M	-	-	-	Glycosyltransferase sugar-binding region containing DXD motif
PLIICNAG_02061	0.0	epsU	-	-	S	ko:K03328	-	ko00000	Polysaccharide biosynthesis protein
PLIICNAG_02062	2.11e-286	-	-	-	M	-	-	-	CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
PLIICNAG_02063	0.0	pacL	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	P-type ATPase
PLIICNAG_02064	5.7e-68	pacL	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	P-type ATPase
PLIICNAG_02065	2.72e-101	-	-	-	-	-	-	-	-
PLIICNAG_02066	1.03e-41	-	-	-	-	-	-	-	-
PLIICNAG_02067	1.94e-15	nrdF	1.17.4.1	-	F	ko:K00526	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PLIICNAG_02068	3.75e-98	nrdI	-	-	F	ko:K03647	-	ko00000	Belongs to the NrdI family
PLIICNAG_02069	6.65e-129	-	-	-	-	-	-	-	-
PLIICNAG_02070	0.0	-	-	-	S	-	-	-	O-antigen ligase like membrane protein
PLIICNAG_02071	5.24e-41	-	-	-	-	-	-	-	-
PLIICNAG_02072	3.81e-123	gmk2	2.7.4.8	-	F	ko:K00942	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko00002,ko01000	Guanylate kinase homologues.
PLIICNAG_02073	1.49e-121	-	-	-	M	ko:K21471	-	ko00000,ko01000,ko01002,ko01011	NlpC/P60 family
PLIICNAG_02074	1.97e-37	-	-	-	S	ko:K06921	-	ko00000	Archaea bacterial proteins of unknown function
PLIICNAG_02075	1e-70	-	-	-	S	ko:K06921	-	ko00000	Archaea bacterial proteins of unknown function
PLIICNAG_02076	3.43e-164	-	-	-	M	ko:K21471	-	ko00000,ko01000,ko01002,ko01011	NlpC P60 family protein
PLIICNAG_02077	4.99e-223	traA	-	-	L	-	-	-	MobA/MobL family
PLIICNAG_02078	0.0	traI	5.99.1.2	-	L	ko:K03169	-	ko00000,ko01000,ko03032	This gene contains a nucleotide ambiguity which may be the result of a sequencing error
PLIICNAG_02079	2.97e-41	-	-	-	-	-	-	-	-
PLIICNAG_02080	1.91e-242	-	-	-	L	-	-	-	Psort location Cytoplasmic, score
PLIICNAG_02081	3.89e-72	-	-	-	S	-	-	-	ASCH domain
PLIICNAG_02082	7.03e-13	-	-	-	-	-	-	-	-
PLIICNAG_02084	1.99e-172	mrr2	-	-	L	ko:K07448	-	ko00000,ko02048	restriction endonuclease
PLIICNAG_02087	1.45e-279	-	-	-	S	-	-	-	SLAP domain
PLIICNAG_02089	4.93e-41	-	-	-	-	-	-	-	-
PLIICNAG_02091	4.61e-36	-	-	-	-	-	-	-	-
PLIICNAG_02092	2.83e-146	-	-	-	G	-	-	-	Peptidase_C39 like family
PLIICNAG_02093	1.35e-82	-	-	-	M	-	-	-	NlpC/P60 family
PLIICNAG_02094	6.69e-28	-	-	-	M	-	-	-	NlpC/P60 family
PLIICNAG_02095	1.66e-15	-	-	-	M	-	-	-	NlpC/P60 family
PLIICNAG_02096	6.31e-29	-	-	-	-	-	-	-	-
PLIICNAG_02097	1.1e-148	ywdE	-	-	K	ko:K20375	ko02024,map02024	ko00000,ko00001,ko03000	Transcriptional regulator
PLIICNAG_02098	1.14e-53	-	-	-	S	-	-	-	Enterocin A Immunity
PLIICNAG_02099	0.0	nrdE	1.17.4.1	-	F	ko:K00525	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PLIICNAG_02100	1.39e-96	nrdI	-	-	F	ko:K03647	-	ko00000	Probably involved in ribonucleotide reductase function
PLIICNAG_02101	1.22e-248	nrdF	1.17.4.1	-	F	ko:K00526	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PLIICNAG_02102	1.43e-102	dar	1.1.1.304, 1.1.1.76	-	IQ	ko:K03366	ko00650,map00650	ko00000,ko00001,ko01000	reductase
PLIICNAG_02103	5.19e-95	metQ1	-	-	P	ko:K02073	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the nlpA lipoprotein family
PLIICNAG_02104	0.0	-	1.3.5.4	-	C	ko:K00244	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	ko00000,ko00001,ko00002,ko01000	FAD binding domain
PLIICNAG_02107	3.07e-32	-	-	-	-	-	-	-	-
PLIICNAG_02108	4.42e-273	-	-	-	C	-	-	-	Glycerophosphoryl diester phosphodiesterase family
PLIICNAG_02109	8.41e-88	-	-	-	S	-	-	-	GtrA-like protein
PLIICNAG_02110	7.94e-220	yfdH	-	GT2	M	ko:K12999,ko:K20534	-	ko00000,ko01000,ko01003,ko01005,ko02000	Glycosyltransferase like family 2
PLIICNAG_02111	0.0	prtB	3.4.21.96	-	O	ko:K01361	-	ko00000,ko01000,ko01002,ko03110	Belongs to the peptidase S8 family
PLIICNAG_02112	1.62e-101	-	-	-	L	-	-	-	COG2826 Transposase and inactivated derivatives, IS30 family
PLIICNAG_02113	0.0	hsdR	3.1.21.3	-	L	ko:K01153	-	ko00000,ko01000,ko02048	DEAD/DEAH box helicase
PLIICNAG_02114	0.0	hsdM	2.1.1.72	-	V	ko:K03427	-	ko00000,ko01000,ko02048	type I restriction-modification system
PLIICNAG_02115	3.88e-66	-	3.1.21.3	-	V	ko:K01154	-	ko00000,ko01000,ko02048	Type I restriction modification DNA specificity domain
PLIICNAG_02116	7e-96	-	3.1.21.3	-	V	ko:K01154	-	ko00000,ko01000,ko02048	Type I restriction modification DNA specificity domain
PLIICNAG_02118	3.75e-165	-	-	-	I	-	-	-	Acyl-transferase
PLIICNAG_02119	2.1e-184	arbx	-	-	M	-	-	-	Glycosyl transferase family 8
PLIICNAG_02120	1.4e-234	-	-	-	M	-	-	-	Glycosyl transferase family 8
PLIICNAG_02121	1.06e-207	-	-	-	M	-	-	-	Glycosyl transferase family 8
PLIICNAG_02122	4.4e-212	arbZ	-	-	I	-	-	-	Phosphate acyltransferases
PLIICNAG_02123	2.49e-47	-	-	-	S	-	-	-	Cytochrome b5
PLIICNAG_02124	2.2e-141	-	-	-	K	-	-	-	Transcriptional regulator, LysR family
PLIICNAG_02125	1.93e-128	-	-	-	K	-	-	-	LysR substrate binding domain
PLIICNAG_02126	1.44e-52	-	-	-	K	-	-	-	LysR substrate binding domain
PLIICNAG_02127	2.58e-63	pinR1	-	-	L	-	-	-	Helix-turn-helix domain of Hin and related proteins, a family of DNA-binding domains unique to bacteria and represented by the Hin protein of Salmonella. The basic HTH domain is a simple fold comprised of three core helices that form a right-handed
PLIICNAG_02129	0.0	XK27_03440	3.1.21.5	-	L	ko:K01156	-	ko00000,ko01000,ko02048	Type III restriction enzyme, res subunit
PLIICNAG_02130	2.06e-261	mod	2.1.1.72	-	L	ko:K00571,ko:K07316	-	ko00000,ko01000,ko02048	DNA methylase
PLIICNAG_02131	1.88e-57	-	1.1.1.29	-	CH	ko:K00018	ko00260,ko00630,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,map00260,map00630,map00680,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PLIICNAG_02132	1.83e-33	-	-	-	S	-	-	-	Small integral membrane protein (DUF2273)
PLIICNAG_02133	8.87e-120	-	-	-	-	-	-	-	-
PLIICNAG_02134	0.0	trePP	2.4.1.216, 2.4.1.8	GH65	G	ko:K00691,ko:K03731	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	Glycosyl hydrolase family 65 central catalytic domain
PLIICNAG_02135	1.08e-145	pgmB	5.4.2.6	-	S	ko:K01838	ko00500,map00500	ko00000,ko00001,ko01000	beta-phosphoglucomutase
PLIICNAG_02136	6.47e-168	-	-	-	S	-	-	-	haloacid dehalogenase-like hydrolase
PLIICNAG_02137	1.23e-74	-	-	-	S	-	-	-	Protein of unknown function (DUF1275)
PLIICNAG_02138	2.23e-73	-	-	-	K	-	-	-	Helix-turn-helix domain
PLIICNAG_02139	5.37e-143	ppiB	5.2.1.8	-	G	ko:K03768	-	ko00000,ko01000,ko03110	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
PLIICNAG_02140	3e-221	ppaC	3.6.1.1	-	C	ko:K15986	ko00190,map00190	ko00000,ko00001,ko01000	inorganic pyrophosphatase
PLIICNAG_02141	4.25e-219	-	-	-	K	-	-	-	Transcriptional regulator
PLIICNAG_02142	0.0	parC	-	-	L	ko:K02621	-	ko00000,ko01000,ko02048,ko03032,ko03036	Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PLIICNAG_02143	0.0	parE	-	-	L	ko:K02622	-	ko00000,ko01000,ko02048,ko03032,ko03036	Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PLIICNAG_02144	1.02e-138	plsY	2.3.1.15	-	I	ko:K08591	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
PLIICNAG_02145	5.72e-120	snf	-	-	KL	-	-	-	domain protein
PLIICNAG_02146	0.0	snf	-	-	KL	-	-	-	domain protein
PLIICNAG_02147	2.89e-50	snf	-	-	KL	-	-	-	domain protein
PLIICNAG_02148	3.72e-22	snf	-	-	KL	-	-	-	domain protein
PLIICNAG_02149	8.57e-43	-	-	-	-	-	-	-	-
PLIICNAG_02150	2.94e-24	-	-	-	-	-	-	-	-
PLIICNAG_02151	9.82e-111	dps	-	-	P	ko:K04047	-	ko00000,ko03036	Belongs to the Dps family
PLIICNAG_02152	2.62e-121	-	-	-	K	-	-	-	acetyltransferase
PLIICNAG_02153	5.36e-101	-	-	-	K	-	-	-	COG COG0846 NAD-dependent protein deacetylases, SIR2 family
PLIICNAG_02154	1.57e-92	-	-	-	K	-	-	-	COG COG0846 NAD-dependent protein deacetylases, SIR2 family
PLIICNAG_02155	1.83e-60	-	-	-	K	-	-	-	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
PLIICNAG_02156	1.63e-48	-	-	-	K	-	-	-	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
PLIICNAG_02157	1.72e-140	-	-	-	K	ko:K09705	-	ko00000	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
PLIICNAG_02158	4.8e-109	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PLIICNAG_02159	3.4e-61	-	1.1.1.3	-	T	ko:K00003,ko:K07166	ko00260,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00270,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	phosphoserine phosphatase activity
PLIICNAG_02160	9.44e-184	nfrA	1.5.1.38	-	C	ko:K19285	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	nitroreductase
PLIICNAG_02161	1.97e-75	-	-	-	S	ko:K06889	-	ko00000	Hydrolases of the alpha beta superfamily
PLIICNAG_02162	4.54e-76	-	-	-	S	-	-	-	Alpha beta hydrolase
PLIICNAG_02163	4.35e-120	-	-	-	K	-	-	-	Acetyltransferase (GNAT) family
PLIICNAG_02164	0.0	gshR3	1.8.1.7	-	C	ko:K00383	ko00480,ko04918,map00480,map04918	ko00000,ko00001,ko01000	Glutathione reductase
PLIICNAG_02166	1.36e-151	-	-	-	L	-	-	-	Integrase
PLIICNAG_02168	6.96e-157	-	-	-	L	ko:K07497	-	ko00000	hmm pf00665
PLIICNAG_02169	6.18e-159	-	-	-	L	-	-	-	Helix-turn-helix domain
PLIICNAG_02170	2.08e-204	cjaA	-	-	ET	ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter substrate-binding protein
PLIICNAG_02171	1.89e-171	glnQ	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
PLIICNAG_02172	2.95e-139	glnP7	-	-	P	ko:K02029	-	ko00000,ko00002,ko02000	ABC transporter permease
PLIICNAG_02173	1.32e-144	glnP9	-	-	P	ko:K02029	-	ko00000,ko00002,ko02000	ABC transporter, permease protein
PLIICNAG_02174	1.03e-91	adhR	-	-	K	ko:K21745	-	ko00000,ko03000	helix_turn_helix, mercury resistance
PLIICNAG_02175	5.45e-37	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2255)
PLIICNAG_02176	9.52e-141	-	-	-	G	-	-	-	Antibiotic biosynthesis monooxygenase
PLIICNAG_02177	2.61e-133	-	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	Maltose acetyltransferase
PLIICNAG_02178	6.71e-161	-	-	-	S	ko:K07045	-	ko00000	Amidohydrolase
PLIICNAG_02180	1.77e-81	-	-	-	S	-	-	-	Abi-like protein
PLIICNAG_02181	8.62e-109	kptA	-	-	H	ko:K07559	-	ko00000,ko01000,ko03016	Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP- ribose 1''-2''-cyclic phosphate (APPR P). May function as an ADP- ribosylase
PLIICNAG_02182	4e-88	fabK	1.3.1.9	-	S	ko:K02371	ko00061,ko01100,ko01212,map00061,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Nitronate monooxygenase
PLIICNAG_02183	7.55e-44	-	-	-	-	-	-	-	-
PLIICNAG_02184	1.23e-291	-	-	-	L	ko:K07478	-	ko00000	AAA C-terminal domain
PLIICNAG_02185	3.49e-188	glxR	1.1.1.31	-	I	ko:K00020	ko00280,ko01100,map00280,map01100	ko00000,ko00001,ko01000	Dehydrogenase
PLIICNAG_02186	8.01e-68	-	-	-	-	-	-	-	-
PLIICNAG_02187	1.44e-31	-	-	-	K	ko:K07729	-	ko00000,ko03000	Helix-turn-helix XRE-family like proteins
PLIICNAG_02188	1.35e-161	nth2	-	-	L	ko:K07457	-	ko00000	Base excision DNA repair protein, HhH-GPD family
PLIICNAG_02189	6.31e-159	gntR1	-	-	K	ko:K03710	-	ko00000,ko03000	UTRA
PLIICNAG_02190	2.88e-272	-	-	-	-	-	-	-	-
PLIICNAG_02193	7.06e-120	-	-	-	-	-	-	-	-
PLIICNAG_02194	0.0	slpX	-	-	S	-	-	-	SLAP domain
PLIICNAG_02195	3.16e-145	pfoSR	-	-	S	ko:K07035	-	ko00000	Phosphotransferase system, EIIC
PLIICNAG_02196	4.12e-24	pfoSR	-	-	S	ko:K07035	-	ko00000	Phosphotransferase system, EIIC
PLIICNAG_02198	0.0	-	-	-	LV	-	-	-	site-specific DNA-methyltransferase (adenine-specific) activity
PLIICNAG_02199	6.71e-07	-	-	-	-	-	-	-	-
PLIICNAG_02200	2.01e-209	galU	2.7.7.9	-	M	ko:K00963	ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	UTP-glucose-1-phosphate uridylyltransferase
PLIICNAG_02201	0.0	speA	4.1.1.17, 4.1.1.18, 4.1.1.19	-	E	ko:K01581,ko:K01582,ko:K01585	ko00310,ko00330,ko00480,ko00960,ko01100,ko01110,ko01130,map00310,map00330,map00480,map00960,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Orn/Lys/Arg decarboxylase, C-terminal domain
PLIICNAG_02202	0.0	-	-	-	E	-	-	-	Amino acid permease
PLIICNAG_02203	2.74e-72	-	-	-	-	-	-	-	-
PLIICNAG_02205	9.43e-279	-	-	-	KQ	-	-	-	helix_turn_helix, mercury resistance
PLIICNAG_02206	3.31e-267	rfbB	4.2.1.46	-	M	ko:K01710	ko00521,ko00523,ko00525,ko01055,ko01130,map00521,map00523,map00525,map01055,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
PLIICNAG_02207	3.75e-211	rfbA	2.7.7.24	-	H	ko:K00973	ko00521,ko00523,ko00525,ko01130,map00521,map00523,map00525,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
PLIICNAG_02208	1.93e-149	rfbC	5.1.3.13	-	M	ko:K01790	ko00521,ko00523,ko01130,map00521,map00523,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
PLIICNAG_02209	3.08e-243	rfbD	1.1.1.133	-	M	ko:K00067	ko00521,ko00523,ko01130,map00521,map00523,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
PLIICNAG_02210	6.95e-125	racD	5.1.1.13	-	M	ko:K01779	ko00250,ko01054,map00250,map01054	ko00000,ko00001,ko01000	Belongs to the aspartate glutamate racemases family
PLIICNAG_02211	9.43e-100	-	-	-	P	ko:K07085	-	ko00000	Predicted Permease Membrane Region
PLIICNAG_02212	8.72e-161	-	-	-	P	ko:K07085	-	ko00000	Predicted Permease Membrane Region
PLIICNAG_02213	9.58e-189	aspD	4.1.1.12	-	E	ko:K09758	ko00250,ko00270,ko01100,ko01230,map00250,map00270,map01100,map01230	ko00000,ko00001,ko01000	Aminotransferase
PLIICNAG_02214	1.06e-116	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
PLIICNAG_02216	3.46e-57	yhxD	-	-	IQ	-	-	-	Enoyl-(Acyl carrier protein) reductase
PLIICNAG_02217	3.3e-196	nadE	6.3.1.5	-	F	ko:K01916	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
PLIICNAG_02218	0.0	pncB	6.3.4.21	-	F	ko:K00763	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
PLIICNAG_02219	1.64e-262	-	-	-	M	-	-	-	Glycosyl transferases group 1
PLIICNAG_02220	1.69e-172	tagA	2.4.1.187	GT26	F	ko:K05946	ko05111,map05111	ko00000,ko00001,ko01000,ko01003	Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
PLIICNAG_02221	1.02e-101	-	-	-	-	-	-	-	-
PLIICNAG_02224	3.25e-106	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
PLIICNAG_02225	2.04e-275	atoB	1.1.1.88, 2.3.1.9	-	I	ko:K00054,ko:K00626	ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the thiolase family
PLIICNAG_02226	1.09e-274	mvaA	1.1.1.88, 2.3.1.9	-	C	ko:K00054,ko:K00626	ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the HMG-CoA reductase family
PLIICNAG_02227	5.43e-276	mvaS	2.3.3.10	-	I	ko:K01641	ko00072,ko00280,ko00650,ko00900,ko01100,ko01110,ko01130,map00072,map00280,map00650,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Hydroxymethylglutaryl-CoA synthase
PLIICNAG_02228	1.9e-61	-	-	-	-	-	-	-	-
PLIICNAG_02229	7.53e-24	ybcH	-	-	D	ko:K06889	-	ko00000	Alpha beta
PLIICNAG_02230	2.26e-15	-	-	-	-	-	-	-	-
PLIICNAG_02231	2.71e-180	pnuC	-	-	H	ko:K03811	-	ko00000,ko02000	nicotinamide mononucleotide transporter
PLIICNAG_02232	9.08e-21	-	-	-	M	-	-	-	domain protein
PLIICNAG_02233	3.24e-116	-	-	-	M	-	-	-	YSIRK type signal peptide
PLIICNAG_02234	3.84e-84	-	-	-	M	-	-	-	domain protein
PLIICNAG_02235	2.32e-71	-	-	-	-	-	-	-	-
PLIICNAG_02236	3.71e-105	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
PLIICNAG_02238	1.57e-97	codA	-	-	F	-	-	-	Cytidine and deoxycytidylate deaminase zinc-binding region
PLIICNAG_02239	1.38e-67	-	-	-	F	-	-	-	Phosphorylase superfamily
PLIICNAG_02240	1.28e-104	-	-	-	F	-	-	-	Phosphorylase superfamily
PLIICNAG_02241	1.78e-152	yjhB	3.6.1.13	-	F	ko:K01515	ko00230,map00230	ko00000,ko00001,ko01000	NUDIX domain
PLIICNAG_02242	4.45e-83	-	-	-	-	-	-	-	-
PLIICNAG_02243	2.02e-107	-	-	-	S	-	-	-	Domain of unknown function (DUF5067)
PLIICNAG_02244	1.85e-58	-	-	-	-	-	-	-	-