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ORF_ID	e_value	Gene_name	EC_number	CAZy	COGs	KEGG_ko	KEGG_Pathway	BRITE	Description
CLEDNEIB_00001	3.03e-230	ribF	2.7.1.26, 2.7.7.2	-	H	ko:K11753	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Belongs to the ribF family
CLEDNEIB_00002	2.35e-211	truB	5.4.99.25	-	J	ko:K03177,ko:K03483	-	ko00000,ko01000,ko03000,ko03016	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
CLEDNEIB_00003	6.79e-79	rbfA	-	-	J	ko:K02834	-	ko00000,ko03009	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
CLEDNEIB_00004	0.0	infB	-	-	J	ko:K02519	-	ko00000,ko03012,ko03029	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
CLEDNEIB_00005	2.2e-62	ylxQ	-	-	J	-	-	-	ribosomal protein
CLEDNEIB_00006	9.2e-64	ylxR	-	-	K	ko:K07742	-	ko00000	Protein of unknown function (DUF448)
CLEDNEIB_00007	2.23e-262	nusA	-	-	K	ko:K02600	-	ko00000,ko03009,ko03021	Participates in both transcription termination and antitermination
CLEDNEIB_00008	4.83e-108	rimP	-	-	J	ko:K09748	-	ko00000,ko03009	Required for maturation of 30S ribosomal subunits
CLEDNEIB_00009	0.0	polC	2.7.7.7	-	L	ko:K03763	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
CLEDNEIB_00010	0.0	proS	6.1.1.15	-	J	ko:K01881	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
CLEDNEIB_00011	1.83e-253	rseP	-	-	M	ko:K11749	ko02024,ko04112,map02024,map04112	ko00000,ko00001,ko01000,ko01002	zinc metalloprotease
CLEDNEIB_00012	1.62e-189	cdsA	2.7.7.41	-	I	ko:K00981	ko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070	ko00000,ko00001,ko00002,ko01000	Belongs to the CDS family
CLEDNEIB_00013	3.04e-176	uppS	2.5.1.31	-	H	ko:K00806	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
CLEDNEIB_00014	8.57e-122	frr	-	-	J	ko:K02838	-	ko00000,ko03012	Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
CLEDNEIB_00015	2.38e-167	pyrH	2.7.4.22	-	F	ko:K09903	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphorylation of UMP to UDP
CLEDNEIB_00016	4.33e-236	tsf	-	-	J	ko:K02357	-	ko00000,ko03012,ko03029	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
CLEDNEIB_00017	1.56e-180	rpsB	-	-	J	ko:K02967	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uS2 family
CLEDNEIB_00018	1.82e-254	yabB	2.1.1.223	-	L	ko:K07461,ko:K15460	-	ko00000,ko01000,ko03016	Methyltransferase small domain
CLEDNEIB_00019	1.46e-145	plsC	2.3.1.51	-	I	ko:K00655	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Acyltransferase
CLEDNEIB_00020	9.19e-287	cfa	2.1.1.79	-	M	ko:K00574	-	ko00000,ko01000	cyclopropane-fatty-acyl-phospholipid synthase
CLEDNEIB_00021	0.0	pepO	-	-	O	ko:K07386	-	ko00000,ko01000,ko01002	Peptidase family M13
CLEDNEIB_00022	0.0	mdlB	-	-	V	ko:K06147,ko:K18890	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
CLEDNEIB_00023	0.0	mdlA	-	-	V	ko:K06148,ko:K18889	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
CLEDNEIB_00024	6.43e-41	XK26_06720	-	-	S	ko:K09976	-	ko00000	Uncharacterised protein family (UPF0154)
CLEDNEIB_00025	5.3e-49	ynzC	-	-	S	-	-	-	UPF0291 protein
CLEDNEIB_00026	1.99e-145	lexA	3.4.21.88	-	K	ko:K01356	-	ko00000,ko00002,ko01000,ko01002,ko03400	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
CLEDNEIB_00027	3.17e-191	-	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase family
CLEDNEIB_00028	2.31e-154	ung2	3.2.2.27	-	L	ko:K21929	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Uracil-DNA glycosylase
CLEDNEIB_00029	2.28e-74	rplS	-	-	J	ko:K02884	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
CLEDNEIB_00030	2.41e-175	trmD	2.1.1.228	-	J	ko:K00554	-	ko00000,ko01000,ko03016	Belongs to the RNA methyltransferase TrmD family
CLEDNEIB_00031	2.34e-119	rimM	-	-	J	ko:K02860	-	ko00000,ko03009	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
CLEDNEIB_00032	2.36e-60	rpsP	-	-	J	ko:K02959	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Belongs to the bacterial ribosomal protein bS16 family
CLEDNEIB_00033	2.7e-289	ffh	3.6.5.4	-	U	ko:K03106	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko01000,ko02044	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
CLEDNEIB_00034	1.17e-73	ylxM	-	-	S	ko:K09787	-	ko00000	Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
CLEDNEIB_00035	5.8e-247	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
CLEDNEIB_00036	0.0	ctrA	-	-	E	ko:K03294	-	ko00000	amino acid
CLEDNEIB_00037	3.87e-60	-	-	-	-	-	-	-	-
CLEDNEIB_00038	0.0	pepD2	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
CLEDNEIB_00039	1.04e-221	ftsY	-	-	U	ko:K03110	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
CLEDNEIB_00040	0.0	smc	-	-	D	ko:K03529	-	ko00000,ko03036	Required for chromosome condensation and partitioning
CLEDNEIB_00041	1.56e-161	rnc	3.1.26.3	-	J	ko:K03685	ko03008,ko05205,map03008,map05205	ko00000,ko00001,ko01000,ko03009,ko03019,ko03036	Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
CLEDNEIB_00042	0.0	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
CLEDNEIB_00043	0.0	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
CLEDNEIB_00044	9.26e-199	oppC5	-	-	P	ko:K02034	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
CLEDNEIB_00045	6.07e-225	oppB	-	-	P	ko:K02033,ko:K02034	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
CLEDNEIB_00046	1.39e-230	oppF	-	-	P	ko:K02032	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
CLEDNEIB_00047	1.17e-246	oppD	-	-	P	ko:K02031,ko:K15583	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
CLEDNEIB_00048	3.1e-47	acpP	-	-	IQ	ko:K02078	-	ko00000,ko00001	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CLEDNEIB_00049	1.57e-234	plsX	2.3.1.15	-	I	ko:K03621	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
CLEDNEIB_00050	0.0	recG	3.6.4.12	-	L	ko:K03655	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
CLEDNEIB_00051	0.0	yloV	-	-	S	ko:K07030	-	ko00000	DAK2 domain fusion protein YloV
CLEDNEIB_00052	1.67e-74	yloU	-	-	S	-	-	-	Asp23 family, cell envelope-related function
CLEDNEIB_00053	3.82e-35	rpmB	-	-	J	ko:K02902	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL28 family
CLEDNEIB_00054	4.85e-65	-	-	-	-	-	-	-	-
CLEDNEIB_00055	1.5e-159	thiN	2.7.6.2	-	H	ko:K00949	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000	thiamine pyrophosphokinase
CLEDNEIB_00056	4.86e-150	rpe	5.1.3.1	-	G	ko:K01783	ko00030,ko00040,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the ribulose-phosphate 3-epimerase family
CLEDNEIB_00057	2.64e-212	rsgA	3.1.3.100	-	S	ko:K06949	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000,ko03009	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
CLEDNEIB_00058	0.0	prkC	2.7.11.1	-	KLT	ko:K08884,ko:K12132	-	ko00000,ko01000,ko01001	serine threonine protein kinase
CLEDNEIB_00059	4.69e-189	stp	3.1.3.16	-	T	ko:K20074	-	ko00000,ko01000,ko01009	phosphatase
CLEDNEIB_00060	3.5e-312	sun	2.1.1.176	-	J	ko:K03500	-	ko00000,ko01000,ko03009	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
CLEDNEIB_00061	1.37e-221	fmt	2.1.2.9	-	J	ko:K00604	ko00670,ko00970,map00670,map00970	ko00000,ko00001,ko01000	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
CLEDNEIB_00062	0.0	priA	-	-	L	ko:K04066	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
CLEDNEIB_00063	5.6e-45	rpoZ	2.7.7.6	-	K	ko:K03060	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
CLEDNEIB_00064	6.69e-142	gmk	2.7.4.8	-	F	ko:K00942	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko00002,ko01000	Essential for recycling GMP and indirectly, cGMP
CLEDNEIB_00065	2.46e-102	-	-	-	S	-	-	-	ASCH
CLEDNEIB_00066	0.0	recN	-	-	L	ko:K03631	-	ko00000,ko03400	May be involved in recombinational repair of damaged DNA
CLEDNEIB_00067	2.71e-192	rrmJ	2.1.1.226, 2.1.1.227	-	J	ko:K06442	-	ko00000,ko01000,ko03009	Ribosomal RNA large subunit methyltransferase J
CLEDNEIB_00068	4.17e-201	ispA	2.5.1.1, 2.5.1.10, 2.5.1.29	-	H	ko:K13789	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko01006	Belongs to the FPP GGPP synthase family
CLEDNEIB_00069	4.4e-47	xseB	3.1.11.6	-	L	ko:K03602	ko03430,map03430	ko00000,ko00001,ko01000,ko03400	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
CLEDNEIB_00070	5.59e-251	xseA	3.1.11.6	-	L	ko:K03601	ko03430,map03430	ko00000,ko00001,ko01000,ko03400	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
CLEDNEIB_00071	1.83e-196	folD	1.5.1.5, 3.5.4.9	-	F	ko:K01491	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
CLEDNEIB_00072	5.2e-85	nusB	-	-	K	ko:K03625	-	ko00000,ko03009,ko03021	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
CLEDNEIB_00073	1.89e-90	WQ51_04310	-	-	S	ko:K10947	-	ko00000,ko03000	Asp23 family, cell envelope-related function
CLEDNEIB_00074	1e-131	efp	-	-	J	ko:K02356	-	ko00000,ko03012	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
CLEDNEIB_00075	4.69e-261	pepP	3.4.11.9, 3.4.13.9	-	E	ko:K01262,ko:K01271	-	ko00000,ko01000,ko01002	Creatinase/Prolidase N-terminal domain
CLEDNEIB_00076	5.95e-64	rpmA	-	-	J	ko:K02899	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL27 family
CLEDNEIB_00077	6.82e-66	rplU	-	-	J	ko:K02888	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein binds to 23S rRNA in the presence of protein L20
CLEDNEIB_00078	0.0	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2325)
CLEDNEIB_00079	4.64e-256	ilvE	2.6.1.42	-	E	ko:K00826	ko00270,ko00280,ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00270,map00280,map00290,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Branched-chain amino acid aminotransferase
CLEDNEIB_00080	2.32e-166	-	-	-	S	-	-	-	Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
CLEDNEIB_00081	4.18e-38	dmpI	5.3.2.6	-	G	ko:K01821	ko00362,ko00621,ko00622,ko01100,ko01120,ko01220,map00362,map00621,map00622,map01100,map01120,map01220	ko00000,ko00001,ko00002,ko01000	Belongs to the 4-oxalocrotonate tautomerase family
CLEDNEIB_00082	0.0	-	-	-	S	-	-	-	Predicted membrane protein (DUF2207)
CLEDNEIB_00083	5.62e-274	-	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
CLEDNEIB_00085	0.0	-	-	-	S	-	-	-	Protein of unknown function DUF262
CLEDNEIB_00086	8.08e-205	-	5.2.1.8	-	M	ko:K07533	-	ko00000,ko01000,ko03110	Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
CLEDNEIB_00087	0.0	prtP	3.4.21.96	-	O	ko:K01361	-	ko00000,ko01000,ko01002,ko03110	Belongs to the peptidase S8 family
CLEDNEIB_00088	0.0	XK27_11280	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
CLEDNEIB_00089	2.04e-48	ackA	2.7.2.1	-	F	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
CLEDNEIB_00090	1.6e-137	ackA	2.7.2.1	-	F	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
CLEDNEIB_00091	0.0	pepO	-	-	O	ko:K07386	-	ko00000,ko01000,ko01002	Peptidase family M13
CLEDNEIB_00092	2.77e-78	-	-	-	S	ko:K07006	-	ko00000	Pyridoxamine 5'-phosphate oxidase
CLEDNEIB_00093	4.54e-301	steT	-	-	E	ko:K03294	-	ko00000	amino acid
CLEDNEIB_00094	1.48e-293	amd	-	-	E	-	-	-	Peptidase family M20/M25/M40
CLEDNEIB_00095	1.47e-235	mmuM	2.1.1.10	-	H	ko:K00547	ko00270,ko01100,ko01110,map00270,map01100,map01110	ko00000,ko00001,ko01000	homocysteine S-methyltransferase
CLEDNEIB_00096	4.44e-187	ybgF	-	-	E	ko:K02205,ko:K03293,ko:K16235,ko:K16236	-	ko00000,ko02000	amino acid
CLEDNEIB_00097	7.11e-20	ybgF	-	-	E	ko:K02205,ko:K03293,ko:K16235,ko:K16236	-	ko00000,ko02000	amino acid
CLEDNEIB_00098	5.94e-42	ybgF	-	-	E	ko:K02205,ko:K03293,ko:K16235,ko:K16236	-	ko00000,ko02000	amino acid
CLEDNEIB_00099	6.52e-308	-	-	-	N	ko:K09384	-	ko00000	Uncharacterized conserved protein (DUF2075)
CLEDNEIB_00100	1.58e-33	-	1.8.1.7	-	C	ko:K00383,ko:K21739	ko00480,ko04918,map00480,map04918	ko00000,ko00001,ko01000	Pyridine nucleotide-disulfide oxidoreductase
CLEDNEIB_00101	1.37e-66	-	1.8.1.7	-	C	ko:K00383,ko:K21739	ko00480,ko04918,map00480,map04918	ko00000,ko00001,ko01000	Pyridine nucleotide-disulfide oxidoreductase
CLEDNEIB_00102	3.64e-84	-	1.8.1.7	-	C	ko:K00383,ko:K21739	ko00480,ko04918,map00480,map04918	ko00000,ko00001,ko01000	Pyridine nucleotide-disulfide oxidoreductase
CLEDNEIB_00103	8.08e-262	-	-	-	-	-	-	-	-
CLEDNEIB_00104	0.0	-	-	-	S	-	-	-	C4-dicarboxylate anaerobic carrier
CLEDNEIB_00105	4.86e-120	hpt	2.4.2.8	-	F	ko:K00760	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the purine pyrimidine phosphoribosyltransferase family
CLEDNEIB_00106	5.43e-133	-	-	-	S	ko:K07038	-	ko00000	LexA-binding, inner membrane-associated putative hydrolase
CLEDNEIB_00107	8.9e-51	-	-	-	-	-	-	-	-
CLEDNEIB_00108	2.82e-152	patB	4.4.1.8	-	E	ko:K14155	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko01000,ko01007	Aminotransferase, class I
CLEDNEIB_00109	4.15e-48	patB	4.4.1.8	-	E	ko:K14155	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko01000,ko01007	Aminotransferase, class I
CLEDNEIB_00110	3.62e-55	-	-	-	-	-	-	-	-
CLEDNEIB_00111	3.05e-307	brnQ	-	-	U	ko:K03311	-	ko00000	Component of the transport system for branched-chain amino acids
CLEDNEIB_00112	1.33e-88	-	-	-	S	ko:K07150	-	ko00000	Protein of unknown function (DUF554)
CLEDNEIB_00113	2.43e-18	-	-	-	S	ko:K07150	-	ko00000	Protein of unknown function (DUF554)
CLEDNEIB_00114	5.97e-56	mleR2	-	-	K	-	-	-	LysR substrate binding domain
CLEDNEIB_00115	9.7e-304	yclC	4.1.1.61, 4.1.1.98	-	H	ko:K01612,ko:K03182,ko:K16874	ko00130,ko00365,ko00627,ko01100,ko01110,ko01120,ko01220,map00130,map00365,map00627,map01100,map01110,map01120,map01220	ko00000,ko00001,ko00002,ko01000	3-octaprenyl-4-hydroxybenzoate carboxy-lyase
CLEDNEIB_00116	1.4e-35	ubiX	2.5.1.129	-	H	ko:K03186	ko00130,ko00627,ko00940,ko01100,ko01110,ko01120,ko01220,map00130,map00627,map00940,map01100,map01110,map01120,map01220	ko00000,ko00001,ko00002,ko01000	Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN
CLEDNEIB_00117	1.48e-25	-	-	-	-	-	-	-	-
CLEDNEIB_00118	2.62e-104	tdh	1.1.1.14	-	C	ko:K00008	ko00040,ko00051,ko01100,map00040,map00051,map01100	ko00000,ko00001,ko00002,ko01000	Zinc-binding dehydrogenase
CLEDNEIB_00119	1.95e-108	tdh	1.1.1.14	-	C	ko:K00008	ko00040,ko00051,ko01100,map00040,map00051,map01100	ko00000,ko00001,ko00002,ko01000	Zinc-binding dehydrogenase
CLEDNEIB_00120	2.75e-09	-	-	-	-	-	-	-	-
CLEDNEIB_00121	6.83e-84	glcD	1.1.3.15	-	C	ko:K00104	ko00630,ko01100,ko01110,ko01120,ko01130,map00630,map01100,map01110,map01120,map01130	ko00000,ko00001,ko01000	FAD linked oxidases, C-terminal domain
CLEDNEIB_00122	9.04e-87	glcD	1.1.3.15	-	C	ko:K00104	ko00630,ko01100,ko01110,ko01120,ko01130,map00630,map01100,map01110,map01120,map01130	ko00000,ko00001,ko01000	FAD linked oxidases, C-terminal domain
CLEDNEIB_00123	5.76e-54	glcD	1.1.3.15	-	C	ko:K00104	ko00630,ko01100,ko01110,ko01120,ko01130,map00630,map01100,map01110,map01120,map01130	ko00000,ko00001,ko01000	FAD linked oxidases, C-terminal domain
CLEDNEIB_00124	2.14e-220	-	-	-	S	ko:K07133	-	ko00000	cog cog1373
CLEDNEIB_00125	5.85e-293	pbuG	-	-	S	ko:K06901	-	ko00000,ko02000	permease
CLEDNEIB_00126	3.03e-187	-	-	-	S	-	-	-	haloacid dehalogenase-like hydrolase
CLEDNEIB_00127	2.04e-95	-	-	-	T	ko:K07171	-	ko00000,ko01000,ko02048	PemK-like, MazF-like toxin of type II toxin-antitoxin system
CLEDNEIB_00129	8.94e-196	ydiM	-	-	G	-	-	-	Major facilitator superfamily
CLEDNEIB_00130	1.54e-34	-	-	-	EGP	-	-	-	Transmembrane secretion effector
CLEDNEIB_00131	6.29e-12	fabZ	3.5.1.108, 4.2.1.59	-	IM	ko:K16363	ko00061,ko00540,ko01100,ko01212,map00061,map00540,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004,ko01005	FabA-like domain
CLEDNEIB_00132	1.34e-47	-	-	-	F	-	-	-	nucleoside 2-deoxyribosyltransferase
CLEDNEIB_00133	3.59e-17	-	-	-	S	-	-	-	Adenine-specific methyltransferase EcoRI
CLEDNEIB_00135	5.15e-154	-	-	-	S	ko:K07507	-	ko00000,ko02000	MgtC family
CLEDNEIB_00136	1.64e-304	-	-	-	I	-	-	-	Protein of unknown function (DUF2974)
CLEDNEIB_00137	5.32e-35	-	-	-	S	-	-	-	Transglycosylase associated protein
CLEDNEIB_00138	1.9e-15	-	-	-	S	-	-	-	CsbD-like
CLEDNEIB_00139	0.0	-	1.3.5.4	-	C	ko:K00244	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	ko00000,ko00001,ko00002,ko01000	FAD binding domain
CLEDNEIB_00142	2.19e-124	-	2.4.2.7	-	F	ko:K00759	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000,ko04147	Phosphoribosyl transferase domain
CLEDNEIB_00143	7.67e-234	-	-	-	P	ko:K06901	-	ko00000,ko02000	secondary active sulfate transmembrane transporter activity
CLEDNEIB_00144	1.88e-247	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
CLEDNEIB_00145	1.03e-05	ywdE	-	-	K	ko:K20375	ko02024,map02024	ko00000,ko00001,ko03000	Transcriptional regulator
CLEDNEIB_00146	2.69e-265	-	-	-	EGP	-	-	-	Major facilitator Superfamily
CLEDNEIB_00147	1.9e-11	ywdE	-	-	K	ko:K20375	ko02024,map02024	ko00000,ko00001,ko03000	Transcriptional regulator
CLEDNEIB_00148	3.31e-149	-	-	-	S	-	-	-	Uncharacterised protein family (UPF0236)
CLEDNEIB_00149	6.91e-84	crcB1	-	-	U	ko:K06199	-	ko00000,ko02000	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
CLEDNEIB_00150	2.08e-84	crcB	-	-	U	ko:K06199	-	ko00000,ko02000	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
CLEDNEIB_00151	9.88e-39	-	-	-	C	-	-	-	Pyridoxamine 5'-phosphate oxidase
CLEDNEIB_00152	1.28e-98	-	-	-	L	ko:K07496	-	ko00000	Transposase
CLEDNEIB_00153	3.49e-108	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
CLEDNEIB_00154	4.43e-32	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
CLEDNEIB_00155	6.33e-293	pbuG	-	-	S	ko:K06901	-	ko00000,ko02000	permease
CLEDNEIB_00156	9e-294	glyA	2.1.2.1	-	E	ko:K00600	ko00260,ko00460,ko00630,ko00670,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko01523,map00260,map00460,map00630,map00670,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map01523	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
CLEDNEIB_00158	0.0	yjcA	-	-	S	ko:K19350	ko02010,map02010	ko00000,ko00001,ko01504,ko02000	ABC transporter
CLEDNEIB_00159	0.0	citF	2.8.3.10	-	H	ko:K01643	ko02020,map02020	ko00000,ko00001,ko01000	Citrate (pro-3S)-lyase alpha chain
CLEDNEIB_00160	2.18e-215	citE	4.1.3.34	-	G	ko:K01644	ko02020,map02020	ko00000,ko00001,ko01000	Belongs to the HpcH HpaI aldolase family
CLEDNEIB_00161	2.27e-59	citD	-	-	C	ko:K01646	ko02020,map02020	ko00000,ko00001	Covalent carrier of the coenzyme of citrate lyase
CLEDNEIB_00162	3.93e-248	citC	6.2.1.22	-	H	ko:K01910	ko02020,map02020	ko00000,ko00001,ko01000	Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
CLEDNEIB_00163	4.19e-197	-	-	-	I	-	-	-	Alpha/beta hydrolase family
CLEDNEIB_00164	0.0	citP	-	-	P	ko:K03319	-	ko00000	Sodium:sulfate symporter transmembrane region
CLEDNEIB_00165	0.0	pepC4	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	Peptidase C1-like family
CLEDNEIB_00166	2.11e-86	-	-	-	-	-	-	-	-
CLEDNEIB_00167	5.49e-53	-	-	-	-	-	-	-	-
CLEDNEIB_00168	1.85e-83	-	-	-	M	-	-	-	Rib/alpha-like repeat
CLEDNEIB_00169	4.93e-214	ldh	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	Belongs to the LDH MDH superfamily. LDH family
CLEDNEIB_00172	0.0	frdA	1.3.5.4	-	C	ko:K00244	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	ko00000,ko00001,ko00002,ko01000	FAD binding domain
CLEDNEIB_00173	0.0	fumC	4.2.1.2	-	C	ko:K01679	ko00020,ko00620,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko04934,ko05200,ko05211,map00020,map00620,map00720,map01100,map01110,map01120,map01130,map01200,map04934,map05200,map05211	ko00000,ko00001,ko00002,ko01000	Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
CLEDNEIB_00174	4.08e-47	-	-	-	-	-	-	-	-
CLEDNEIB_00175	3.27e-239	-	-	-	S	ko:K07133	-	ko00000	cog cog1373
CLEDNEIB_00176	2.82e-130	metI	-	-	P	ko:K02072	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
CLEDNEIB_00177	1.46e-240	metN	-	-	P	ko:K02071	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
CLEDNEIB_00178	3.21e-208	metQ	-	-	P	ko:K02073	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the nlpA lipoprotein family
CLEDNEIB_00179	0.0	aha1	-	-	P	ko:K12952	-	ko00000,ko01000	E1-E2 ATPase
CLEDNEIB_00180	7.3e-22	ps301	-	-	K	-	-	-	sequence-specific DNA binding
CLEDNEIB_00181	1.35e-123	folA	1.5.1.3	-	H	ko:K00287	ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523	ko00000,ko00001,ko00002,ko01000	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
CLEDNEIB_00182	6.71e-242	thyA	2.1.1.45	-	F	ko:K00560	ko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523	ko00000,ko00001,ko00002,ko01000	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
CLEDNEIB_00183	1.03e-314	yifK	-	-	E	ko:K03293	-	ko00000	Amino acid permease
CLEDNEIB_00184	2.36e-74	-	-	-	S	-	-	-	PFAM Uncharacterised protein family UPF0150
CLEDNEIB_00186	2.42e-156	cbh	3.5.1.24	-	M	ko:K01442	ko00120,ko00121,ko01100,map00120,map00121,map01100	ko00000,ko00001,ko01000	Linear amide C-N hydrolase, choloylglycine hydrolase family protein
CLEDNEIB_00187	2.68e-40	cbh	3.5.1.24	-	M	ko:K01442	ko00120,ko00121,ko01100,map00120,map00121,map01100	ko00000,ko00001,ko01000	Linear amide C-N hydrolase, choloylglycine hydrolase family protein
CLEDNEIB_00188	1.08e-127	-	-	-	I	-	-	-	PAP2 superfamily
CLEDNEIB_00189	6.8e-169	-	-	-	S	-	-	-	Uncharacterised protein, DegV family COG1307
CLEDNEIB_00190	2.03e-310	eno	4.2.1.11	-	G	ko:K01689	ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066	ko00000,ko00001,ko00002,ko01000,ko03019,ko04147	Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
CLEDNEIB_00191	4.43e-98	-	-	-	S	-	-	-	Domain of unknown function (DUF4767)
CLEDNEIB_00192	2.03e-111	yfhC	-	-	C	-	-	-	nitroreductase
CLEDNEIB_00193	5.95e-14	ypbG	2.7.1.2	-	GK	ko:K00845	ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	ROK family
CLEDNEIB_00194	1.08e-102	ypbG	2.7.1.2	-	GK	ko:K00845	ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	ROK family
CLEDNEIB_00195	0.0	pbg6	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
CLEDNEIB_00196	3.95e-170	pts23C	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
CLEDNEIB_00197	2.37e-21	-	-	-	S	-	-	-	Bacteriocin helveticin-J
CLEDNEIB_00198	7.5e-176	-	-	-	S	-	-	-	Bacteriocin helveticin-J
CLEDNEIB_00199	9.13e-245	-	-	-	S	-	-	-	SLAP domain
CLEDNEIB_00200	5.62e-28	-	-	-	C	-	-	-	Pyridoxamine 5'-phosphate oxidase
CLEDNEIB_00201	2.14e-121	-	-	-	E	-	-	-	Amino acid permease
CLEDNEIB_00202	1.87e-203	-	-	-	E	-	-	-	Amino acid permease
CLEDNEIB_00203	3.33e-286	-	-	-	G	ko:K02445	-	ko00000,ko02000	Major Facilitator Superfamily
CLEDNEIB_00204	2.05e-76	mrr2	-	-	L	ko:K07448	-	ko00000,ko02048	restriction endonuclease
CLEDNEIB_00206	6.34e-276	-	-	-	S	-	-	-	SLAP domain
CLEDNEIB_00207	6.21e-156	-	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
CLEDNEIB_00208	3.55e-173	-	-	-	K	ko:K03492	-	ko00000,ko03000	UTRA
CLEDNEIB_00209	6.71e-78	pts23C	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
CLEDNEIB_00210	7.29e-31	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
CLEDNEIB_00211	5.12e-145	-	-	-	S	-	-	-	SLAP domain
CLEDNEIB_00214	5.99e-26	-	-	-	-	-	-	-	-
CLEDNEIB_00215	6.93e-85	-	-	-	L	ko:K07484	-	ko00000	IS66 Orf2 like protein
CLEDNEIB_00216	1.3e-44	-	-	-	S	-	-	-	Transposase C of IS166 homeodomain
CLEDNEIB_00217	0.0	-	-	-	L	ko:K07484	-	ko00000	Transposase IS66 family
CLEDNEIB_00218	2.3e-142	ywdE	-	-	K	ko:K20375	ko02024,map02024	ko00000,ko00001,ko03000	Transcriptional regulator
CLEDNEIB_00219	4.63e-59	-	-	-	-	-	-	-	-
CLEDNEIB_00220	6.31e-29	-	-	-	-	-	-	-	-
CLEDNEIB_00221	1.1e-148	ywdE	-	-	K	ko:K20375	ko02024,map02024	ko00000,ko00001,ko03000	Transcriptional regulator
CLEDNEIB_00222	1.1e-228	-	-	-	S	-	-	-	Oxidoreductase family, NAD-binding Rossmann fold
CLEDNEIB_00223	2.07e-72	-	-	-	-	-	-	-	-
CLEDNEIB_00224	6.05e-250	ampC	-	-	V	-	-	-	Beta-lactamase
CLEDNEIB_00227	0.0	murE2	6.3.2.13	-	M	ko:K01928	ko00300,ko00550,map00300,map00550	ko00000,ko00001,ko01000,ko01011	Domain of unknown function (DUF1727)
CLEDNEIB_00228	4.94e-146	tdk	2.7.1.21	-	F	ko:K00857	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	thymidine kinase
CLEDNEIB_00229	7.36e-234	prfA	-	-	J	ko:K02835	-	ko00000,ko03012	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
CLEDNEIB_00230	3.44e-200	prmC	2.1.1.297	-	J	ko:K02493	-	ko00000,ko01000,ko03012	Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
CLEDNEIB_00231	7.56e-242	ywlC	2.7.7.87	-	J	ko:K07566	-	ko00000,ko01000,ko03009,ko03016	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
CLEDNEIB_00232	2.15e-145	upp	2.4.2.9	-	F	ko:K00761	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
CLEDNEIB_00233	4.82e-165	atpB	-	-	C	ko:K02108	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko03110	it plays a direct role in the translocation of protons across the membrane
CLEDNEIB_00234	4.83e-37	atpE	-	-	C	ko:K02110	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
CLEDNEIB_00235	5.39e-83	atpF	-	-	C	ko:K02109	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
CLEDNEIB_00236	1.38e-121	atpH	-	-	C	ko:K02113	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
CLEDNEIB_00237	0.0	atpA	3.6.3.14	-	C	ko:K02111	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko01000	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
CLEDNEIB_00238	2.25e-216	atpG	-	-	C	ko:K02115	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
CLEDNEIB_00239	1.74e-316	atpD	3.6.3.14	-	C	ko:K02112	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko01000	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
CLEDNEIB_00240	1.14e-90	atpC	-	-	C	ko:K02114	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Produces ATP from ADP in the presence of a proton gradient across the membrane
CLEDNEIB_00241	1.21e-40	-	-	-	S	-	-	-	Protein of unknown function (DUF1146)
CLEDNEIB_00242	1.68e-227	mbl	-	-	D	ko:K03569	-	ko00000,ko02048,ko03036,ko04812	Cell shape determining protein MreB Mrl
CLEDNEIB_00243	1.31e-67	ytjA	-	-	S	ko:K08998	-	ko00000	Could be involved in insertion of integral membrane proteins into the membrane
CLEDNEIB_00244	8.85e-47	-	-	-	S	-	-	-	Protein of unknown function (DUF2969)
CLEDNEIB_00245	1.38e-274	rodA	-	-	D	ko:K05837	-	ko00000,ko03036	Belongs to the SEDS family
CLEDNEIB_00246	1.91e-103	uspA	-	-	T	-	-	-	universal stress protein
CLEDNEIB_00247	4.53e-55	-	-	-	-	-	-	-	-
CLEDNEIB_00248	2.28e-307	rarA	-	-	L	ko:K07478	-	ko00000	recombination factor protein RarA
CLEDNEIB_00249	1.83e-106	-	-	-	S	-	-	-	Protein of unknown function (DUF1694)
CLEDNEIB_00250	8.8e-142	rpsD	-	-	J	ko:K02986	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
CLEDNEIB_00251	0.0	ezrA	-	-	D	ko:K06286	-	ko00000,ko03036	modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
CLEDNEIB_00252	3.03e-277	iscS2	2.8.1.7	-	E	ko:K04487	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko02048,ko03016,ko03029	Aminotransferase class V
CLEDNEIB_00253	9.32e-293	thiI	2.8.1.4	-	H	ko:K03151	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko03016	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CLEDNEIB_00254	7.95e-182	-	-	-	K	-	-	-	Helix-turn-helix domain
CLEDNEIB_00255	4.46e-165	rsuA	5.4.99.19	-	J	ko:K06183	-	ko00000,ko01000,ko03009	Belongs to the pseudouridine synthase RsuA family
CLEDNEIB_00256	3.53e-32	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
CLEDNEIB_00257	9.39e-85	-	-	-	-	-	-	-	-
CLEDNEIB_00258	3.48e-26	-	-	-	-	-	-	-	-
CLEDNEIB_00259	5.05e-115	-	-	-	-	-	-	-	-
CLEDNEIB_00260	3.02e-171	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
CLEDNEIB_00261	0.0	-	-	-	S	-	-	-	SLAP domain
CLEDNEIB_00262	1.18e-105	-	-	-	S	-	-	-	Protein of unknown function (DUF3232)
CLEDNEIB_00264	6.15e-156	-	-	-	-	-	-	-	-
CLEDNEIB_00266	2.76e-182	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
CLEDNEIB_00267	6.18e-159	-	-	-	L	-	-	-	Helix-turn-helix domain
CLEDNEIB_00268	2.83e-156	-	-	-	L	ko:K07497	-	ko00000	hmm pf00665
CLEDNEIB_00269	9.13e-194	-	-	-	EGP	-	-	-	Major Facilitator
CLEDNEIB_00270	1.67e-50	-	-	-	EGP	-	-	-	Major Facilitator
CLEDNEIB_00271	2.7e-278	-	-	-	L	-	-	-	COG3547 Transposase and inactivated derivatives
CLEDNEIB_00272	9.02e-199	glcU	-	-	U	ko:K05340	-	ko00000,ko02000	sugar transport
CLEDNEIB_00273	1.7e-194	-	-	-	L	ko:K07497	-	ko00000	COG2963 Transposase and inactivated derivatives
CLEDNEIB_00274	1.37e-80	-	-	-	L	ko:K07497	-	ko00000	COG2963 Transposase and inactivated derivatives
CLEDNEIB_00275	3.55e-315	-	-	-	S	-	-	-	Uncharacterised protein family (UPF0236)
CLEDNEIB_00276	6.19e-68	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
CLEDNEIB_00277	5.47e-42	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
CLEDNEIB_00278	5.35e-96	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
CLEDNEIB_00286	7.53e-24	ybcH	-	-	D	ko:K06889	-	ko00000	Alpha beta
CLEDNEIB_00287	1.9e-61	-	-	-	-	-	-	-	-
CLEDNEIB_00288	5.43e-276	mvaS	2.3.3.10	-	I	ko:K01641	ko00072,ko00280,ko00650,ko00900,ko01100,ko01110,ko01130,map00072,map00280,map00650,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Hydroxymethylglutaryl-CoA synthase
CLEDNEIB_00289	1.09e-274	mvaA	1.1.1.88, 2.3.1.9	-	C	ko:K00054,ko:K00626	ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the HMG-CoA reductase family
CLEDNEIB_00290	2.04e-275	atoB	1.1.1.88, 2.3.1.9	-	I	ko:K00054,ko:K00626	ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the thiolase family
CLEDNEIB_00291	4.19e-92	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
CLEDNEIB_00292	1.93e-123	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
CLEDNEIB_00293	4.98e-20	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
CLEDNEIB_00294	3.48e-214	galU	2.7.7.9	-	M	ko:K00963	ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	UTP-glucose-1-phosphate uridylyltransferase
CLEDNEIB_00295	6.52e-198	rbn	-	-	S	ko:K07058	-	ko00000	Belongs to the UPF0761 family
CLEDNEIB_00296	9.98e-211	map	3.4.11.18	-	E	ko:K01265	-	ko00000,ko01000,ko01002	Methionine Aminopeptidase
CLEDNEIB_00297	3.48e-103	ykuP	-	-	C	ko:K03839	-	ko00000	Flavodoxin
CLEDNEIB_00298	5.57e-114	gtcA1	-	-	S	-	-	-	Teichoic acid glycosylation protein
CLEDNEIB_00299	3.14e-276	mnaA	5.1.3.14	-	G	ko:K01791	ko00520,ko01100,ko05111,map00520,map01100,map05111	ko00000,ko00001,ko00002,ko01000,ko01005	Belongs to the UDP-N-acetylglucosamine 2-epimerase family
CLEDNEIB_00300	5.82e-35	-	-	-	-	-	-	-	-
CLEDNEIB_00302	2.59e-311	chbC	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
CLEDNEIB_00303	5.51e-267	yfmL	-	-	L	-	-	-	DEAD DEAH box helicase
CLEDNEIB_00304	6.35e-164	lys	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
CLEDNEIB_00305	5.19e-292	-	-	-	E	ko:K03294	-	ko00000	amino acid
CLEDNEIB_00306	6.05e-133	hpt	2.4.2.8	-	F	ko:K00760	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the purine pyrimidine phosphoribosyltransferase family
CLEDNEIB_00307	1.91e-314	yhdP	-	-	S	-	-	-	Transporter associated domain
CLEDNEIB_00308	1.31e-39	-	-	-	C	-	-	-	nitroreductase
CLEDNEIB_00309	1.26e-11	-	-	-	C	-	-	-	nitroreductase
CLEDNEIB_00310	3.51e-53	-	-	-	-	-	-	-	-
CLEDNEIB_00311	6.56e-112	ptbA	2.7.1.208	-	G	ko:K02755,ko:K02777,ko:K20107,ko:K20108	ko00010,ko00500,ko00520,ko02026,ko02060,ko05111,map00010,map00500,map00520,map02026,map02060,map05111	ko00000,ko00001,ko00002,ko01000,ko02000	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
CLEDNEIB_00312	1.5e-94	-	-	-	-	-	-	-	-
CLEDNEIB_00313	5.32e-176	glvR	-	-	K	ko:K03481	-	ko00000,ko03000	Helix-turn-helix domain, rpiR family
CLEDNEIB_00314	0.0	glvC	2.7.1.208	-	G	ko:K02749,ko:K02750	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system, EIIB
CLEDNEIB_00315	2.23e-110	-	-	-	S	-	-	-	hydrolase
CLEDNEIB_00316	2.65e-18	-	2.7.13.3	-	T	ko:K07706	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	GHKL domain
CLEDNEIB_00317	3.74e-205	-	-	-	S	-	-	-	Phospholipase, patatin family
CLEDNEIB_00318	0.0	xfp	4.1.2.22, 4.1.2.9	-	G	ko:K01621	ko00030,ko00710,ko01100,ko01120,map00030,map00710,map01100,map01120	ko00000,ko00001,ko01000	Phosphoketolase
CLEDNEIB_00319	2.87e-170	-	-	-	K	ko:K22103	-	ko00000,ko03000	DeoR C terminal sensor domain
CLEDNEIB_00320	4.25e-82	-	-	-	S	-	-	-	Enterocin A Immunity
CLEDNEIB_00321	8.76e-73	yitW	-	-	S	-	-	-	Iron-sulfur cluster assembly protein
CLEDNEIB_00322	0.0	sufB	-	-	O	ko:K07033,ko:K09014	-	ko00000	assembly protein SufB
CLEDNEIB_00323	1.51e-104	nifU	-	-	C	ko:K04488	-	ko00000	SUF system FeS assembly protein, NifU family
CLEDNEIB_00324	7.78e-300	sufS	2.8.1.7, 4.4.1.16	-	E	ko:K11717	ko00450,ko01100,map00450,map01100	ko00000,ko00001,ko01000	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
CLEDNEIB_00325	1.58e-301	sufD	-	-	O	ko:K07033,ko:K09015	-	ko00000	FeS assembly protein SufD
CLEDNEIB_00326	2.13e-186	sufC	-	-	O	ko:K09013	-	ko00000,ko02000	FeS assembly ATPase SufC
CLEDNEIB_00327	2.67e-250	-	-	-	L	-	-	-	COG2826 Transposase and inactivated derivatives, IS30 family
CLEDNEIB_00339	3.58e-181	-	-	-	L	-	-	-	COG3547 Transposase and inactivated derivatives
CLEDNEIB_00340	1.3e-202	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
CLEDNEIB_00341	1.16e-128	clpP	3.4.21.92	-	O	ko:K01358	ko04112,ko04212,map04112,map04212	ko00000,ko00001,ko01000,ko01002	Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
CLEDNEIB_00342	8.34e-186	-	-	-	L	-	-	-	Probable transposase
CLEDNEIB_00343	0.0	-	-	-	E	-	-	-	Amino acid permease
CLEDNEIB_00344	2.41e-235	ybcH	-	-	D	ko:K06889	-	ko00000	Alpha beta
CLEDNEIB_00345	0.0	-	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
CLEDNEIB_00346	1.23e-27	-	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
CLEDNEIB_00347	0.0	pts33BCA	-	-	G	ko:K02755,ko:K02756,ko:K02757	ko02060,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
CLEDNEIB_00348	1.16e-184	bglG5	-	-	K	ko:K03488	-	ko00000,ko03000	CAT RNA binding domain
CLEDNEIB_00349	8.1e-273	glxK	2.7.1.165	-	G	ko:K00865	ko00260,ko00561,ko00630,ko01100,ko01120,ko01130,map00260,map00561,map00630,map01100,map01120,map01130	ko00000,ko00001,ko01000	Belongs to the glycerate kinase type-1 family
CLEDNEIB_00350	5.91e-112	ptpA	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
CLEDNEIB_00351	3.08e-152	-	-	-	-	-	-	-	-
CLEDNEIB_00352	6.89e-191	-	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
CLEDNEIB_00353	1.69e-191	-	-	-	S	-	-	-	hydrolase
CLEDNEIB_00354	0.0	glmM	5.4.2.10	-	G	ko:K03431	ko00520,ko01100,ko01130,map00520,map01100,map01130	ko00000,ko00001,ko01000	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
CLEDNEIB_00355	1.3e-218	ybbR	-	-	S	-	-	-	YbbR-like protein
CLEDNEIB_00356	8.69e-194	dacA	2.7.7.85	-	S	ko:K18672	-	ko00000,ko01000	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
CLEDNEIB_00357	1.71e-266	potD	-	-	P	ko:K11069	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
CLEDNEIB_00358	1.08e-178	potC	-	-	P	ko:K11070	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
CLEDNEIB_00359	1.85e-174	potB	-	-	P	ko:K11071	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
CLEDNEIB_00360	4.51e-262	potA	3.6.3.30, 3.6.3.31	-	P	ko:K02010,ko:K11072	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
CLEDNEIB_00361	1.47e-210	murB	1.3.1.98	-	M	ko:K00075	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation
CLEDNEIB_00362	7.47e-128	dnaQ	2.7.7.7	-	L	ko:K02342	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III
CLEDNEIB_00363	1.87e-118	ydiB	-	-	O	ko:K06925	-	ko00000,ko03016	Hydrolase, P-loop family
CLEDNEIB_00364	3.84e-233	pta	2.3.1.8, 3.6.3.21	-	C	ko:K00625,ko:K02028	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000,ko02000	phosphate acetyltransferase
CLEDNEIB_00365	2.33e-174	ung	3.2.2.27	-	L	ko:K03648	ko03410,ko05340,map03410,map05340	ko00000,ko00001,ko01000,ko03400	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
CLEDNEIB_00366	4.17e-203	ycsE	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
CLEDNEIB_00367	3.58e-124	-	-	-	-	-	-	-	-
CLEDNEIB_00368	6.64e-184	tpiA	5.3.1.1	-	G	ko:K01803	ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
CLEDNEIB_00369	6.01e-288	pgk	2.7.2.3	-	F	ko:K00927	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the phosphoglycerate kinase family
CLEDNEIB_00370	1.65e-243	gap	1.2.1.12	-	G	ko:K00134	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
CLEDNEIB_00371	6.71e-241	cggR	-	-	K	ko:K05311	-	ko00000,ko03000	Putative sugar-binding domain
CLEDNEIB_00373	1.73e-96	-	-	-	-	-	-	-	-
CLEDNEIB_00374	1.87e-210	-	-	-	-	-	-	-	-
CLEDNEIB_00375	0.0	ycaM	-	-	E	-	-	-	amino acid
CLEDNEIB_00376	5.08e-170	supH	-	-	S	-	-	-	haloacid dehalogenase-like hydrolase
CLEDNEIB_00377	0.0	-	-	-	S	-	-	-	SH3-like domain
CLEDNEIB_00378	1.06e-111	-	-	-	L	-	-	-	Resolvase, N terminal domain
CLEDNEIB_00379	1.01e-74	-	-	-	-	-	-	-	-
CLEDNEIB_00380	4.83e-41	tnpA1	-	-	L	-	-	-	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
CLEDNEIB_00381	1.13e-90	-	-	-	KLT	-	-	-	Protein kinase domain
CLEDNEIB_00383	1.73e-116	-	-	-	L	ko:K07497	-	ko00000	COG2963 Transposase and inactivated derivatives
CLEDNEIB_00384	5.59e-41	tnpA1	-	-	L	-	-	-	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
CLEDNEIB_00386	2.31e-119	epsB	-	-	M	-	-	-	biosynthesis protein
CLEDNEIB_00387	2.09e-26	ywqE	3.1.3.48	-	GM	ko:K01104	-	ko00000,ko01000	PHP domain protein
CLEDNEIB_00388	3.4e-153	rfbP	-	-	M	ko:K13012,ko:K19428	-	ko00000,ko01000,ko01005	Bacterial sugar transferase
CLEDNEIB_00389	5.84e-268	-	-	GT4	M	ko:K19424	-	ko00000,ko01000,ko01003	Glycosyl transferases group 1
CLEDNEIB_00390	6.95e-197	cps4I	-	-	M	-	-	-	Glycosyltransferase like family 2
CLEDNEIB_00391	2.8e-240	-	-	-	S	-	-	-	EpsG family
CLEDNEIB_00392	8.72e-173	-	-	-	M	-	-	-	Glycosyltransferase sugar-binding region containing DXD motif
CLEDNEIB_00393	8.01e-295	-	-	-	M	-	-	-	CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
CLEDNEIB_00394	3.43e-96	-	2.7.7.39	-	IM	ko:K00980	ko00564,map00564	ko00000,ko00001,ko01000	Cytidylyltransferase-like
CLEDNEIB_00395	7.62e-236	-	-	-	E	-	-	-	Asparagine synthase
CLEDNEIB_00396	1.62e-297	cps4J	-	-	S	-	-	-	MatE
CLEDNEIB_00397	2.14e-190	-	-	-	D	ko:K03496	-	ko00000,ko03036,ko04812	CobQ CobB MinD ParA nucleotide binding domain protein
CLEDNEIB_00399	6.88e-37	repA	-	-	S	-	-	-	Replication initiator protein A
CLEDNEIB_00400	5.71e-58	-	-	-	L	ko:K07473	-	ko00000,ko02048	Addiction module antitoxin, RelB DinJ family
CLEDNEIB_00401	3.01e-50	-	-	-	-	-	-	-	-
CLEDNEIB_00402	0.0	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
CLEDNEIB_00403	0.0	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
CLEDNEIB_00404	3.8e-77	-	-	-	I	-	-	-	alpha/beta hydrolase fold
CLEDNEIB_00405	6.88e-26	-	-	-	-	-	-	-	-
CLEDNEIB_00406	5.78e-39	-	-	-	-	-	-	-	-
CLEDNEIB_00407	2.69e-183	-	-	-	D	-	-	-	AAA domain
CLEDNEIB_00408	6.94e-59	-	-	-	L	ko:K07473	-	ko00000,ko02048	Addiction module antitoxin, RelB DinJ family
CLEDNEIB_00409	8.79e-109	-	-	-	-	-	-	-	-
CLEDNEIB_00410	2.09e-55	-	-	-	-	-	-	-	-
CLEDNEIB_00411	3.99e-36	-	-	-	-	-	-	-	-
CLEDNEIB_00412	0.0	traA	-	-	L	-	-	-	MobA MobL family protein
CLEDNEIB_00413	6.22e-101	-	-	-	-	-	-	-	-
CLEDNEIB_00414	9.57e-87	-	-	-	-	-	-	-	-
CLEDNEIB_00415	0.0	traI	5.99.1.2	-	L	ko:K03169	-	ko00000,ko01000,ko03032	This gene contains a nucleotide ambiguity which may be the result of a sequencing error
CLEDNEIB_00416	3.79e-26	-	-	-	-	-	-	-	-
CLEDNEIB_00417	4.68e-243	-	-	-	L	-	-	-	Psort location Cytoplasmic, score
CLEDNEIB_00418	5.07e-81	-	-	-	K	-	-	-	SIR2-like domain
CLEDNEIB_00419	5.74e-129	pinR1	-	-	L	-	-	-	Helix-turn-helix domain of Hin and related proteins, a family of DNA-binding domains unique to bacteria and represented by the Hin protein of Salmonella. The basic HTH domain is a simple fold comprised of three core helices that form a right-handed
CLEDNEIB_00420	3.84e-62	-	-	-	C	-	-	-	Domain of unknown function (DUF4931)
CLEDNEIB_00421	1.35e-155	-	-	-	-	-	-	-	-
CLEDNEIB_00422	2.06e-183	XK27_08125	-	-	S	ko:K09861	-	ko00000	Belongs to the UPF0246 family
CLEDNEIB_00423	5.44e-178	-	-	-	S	ko:K06889	-	ko00000	Alpha/beta hydrolase family
CLEDNEIB_00424	4.23e-145	-	-	-	G	-	-	-	phosphoglycerate mutase
CLEDNEIB_00425	5.69e-122	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
CLEDNEIB_00426	2.26e-228	yxeA	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter permease
CLEDNEIB_00427	4.83e-154	lolD	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
CLEDNEIB_00428	0.0	pepD4	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
CLEDNEIB_00429	4.74e-51	-	-	-	-	-	-	-	-
CLEDNEIB_00430	1.43e-141	-	-	-	K	-	-	-	WHG domain
CLEDNEIB_00431	1.39e-124	azo1	1.5.1.36, 1.7.1.6	-	S	ko:K03206,ko:K19784,ko:K22393	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	NADPH-dependent FMN reductase
CLEDNEIB_00432	1.82e-126	azr	1.5.1.36	-	S	ko:K22394	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	NADPH-dependent FMN reductase
CLEDNEIB_00433	1.06e-190	-	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Tyrosine phosphatase family
CLEDNEIB_00434	6.37e-231	apbE	2.7.1.180	-	H	ko:K03734	-	ko00000,ko01000	Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
CLEDNEIB_00435	2.12e-114	cvpA	-	-	S	-	-	-	Colicin V production protein
CLEDNEIB_00436	9.37e-169	rsmG	2.1.1.170	-	J	ko:K03501	-	ko00000,ko01000,ko03009,ko03036	Specifically methylates the N7 position of a guanine in 16S rRNA
CLEDNEIB_00437	1.28e-190	noc	-	-	K	ko:K03497	-	ko00000,ko03000,ko03036,ko04812	Belongs to the ParB family
CLEDNEIB_00438	2.77e-175	soj	-	-	D	ko:K03496	-	ko00000,ko03036,ko04812	Sporulation initiation inhibitor
CLEDNEIB_00439	3.96e-197	spo0J	-	-	K	ko:K03497	-	ko00000,ko03000,ko03036,ko04812	Belongs to the ParB family
CLEDNEIB_00440	1.83e-58	yyzM	-	-	S	-	-	-	Bacterial protein of unknown function (DUF951)
CLEDNEIB_00441	2.8e-256	ychF	-	-	J	ko:K06942	-	ko00000,ko03009	ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
CLEDNEIB_00442	1.88e-178	-	-	-	S	-	-	-	Protein of unknown function (DUF1129)
CLEDNEIB_00443	0.0	-	-	-	V	ko:K06147,ko:K06148	-	ko00000,ko02000	ABC transporter, ATP-binding protein
CLEDNEIB_00444	0.0	ndvA	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter
CLEDNEIB_00445	2.9e-157	vanR	-	-	K	-	-	-	response regulator
CLEDNEIB_00446	2.54e-267	-	-	-	T	-	-	-	His Kinase A (phosphoacceptor) domain
CLEDNEIB_00447	0.0	murE	6.3.2.13, 6.3.2.7	-	M	ko:K01928,ko:K05362	ko00300,ko00550,ko01100,map00300,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
CLEDNEIB_00448	3.86e-186	racD	5.1.1.13	-	M	ko:K01779	ko00250,ko01054,map00250,map01054	ko00000,ko00001,ko01000	Belongs to the aspartate glutamate racemases family
CLEDNEIB_00449	1.28e-267	-	-	-	S	ko:K06921	-	ko00000	Archaea bacterial proteins of unknown function
CLEDNEIB_00450	7.68e-38	-	-	-	S	-	-	-	Enterocin A Immunity
CLEDNEIB_00451	7.29e-46	-	-	-	K	ko:K07727	-	ko00000,ko03000	Transcriptional regulator
CLEDNEIB_00452	8.68e-44	-	-	-	-	-	-	-	-
CLEDNEIB_00453	7.77e-36	-	-	-	-	-	-	-	-
CLEDNEIB_00454	0.0	agl	3.2.1.20	GH31	G	ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 31 family
CLEDNEIB_00457	2.38e-176	fruR	-	-	K	ko:K03436	-	ko00000,ko03000	DeoR C terminal sensor domain
CLEDNEIB_00458	1.79e-214	pfkB	2.7.1.56	-	H	ko:K00882	ko00051,map00051	ko00000,ko00001,ko01000	Belongs to the carbohydrate kinase PfkB family. LacC subfamily
CLEDNEIB_00459	4.13e-53	-	-	-	L	-	-	-	Probable transposase
CLEDNEIB_00460	5.02e-69	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
CLEDNEIB_00461	0.0	pepC	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	Peptidase C1-like family
CLEDNEIB_00462	4.42e-187	-	-	-	U	ko:K05340	-	ko00000,ko02000	sugar transport
CLEDNEIB_00463	6.47e-14	-	-	-	-	-	-	-	-
CLEDNEIB_00464	0.0	mgtA	3.6.3.2	-	P	ko:K01531	-	ko00000,ko01000	COG0474 Cation transport ATPase
CLEDNEIB_00465	2.21e-144	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
CLEDNEIB_00466	2.86e-132	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
CLEDNEIB_00467	3.29e-234	-	-	-	S	-	-	-	AAA domain
CLEDNEIB_00468	3.29e-162	gpmA1	5.4.2.11	-	G	ko:K01834	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
CLEDNEIB_00469	4.73e-31	-	-	-	-	-	-	-	-
CLEDNEIB_00470	5.3e-209	-	-	-	P	ko:K16264	-	ko00000,ko02000	cation diffusion facilitator family transporter
CLEDNEIB_00471	1.9e-161	-	-	-	G	-	-	-	Belongs to the phosphoglycerate mutase family
CLEDNEIB_00472	2.57e-172	-	-	-	S	ko:K07090	-	ko00000	membrane transporter protein
CLEDNEIB_00473	6.56e-145	-	3.8.1.2	-	S	ko:K01560	ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120	ko00000,ko00001,ko01000	Haloacid dehalogenase-like hydrolase
CLEDNEIB_00474	1.17e-137	-	3.5.1.124	-	S	ko:K03152	-	ko00000,ko01000,ko01002	DJ-1/PfpI family
CLEDNEIB_00475	2.17e-61	yhaH	-	-	S	-	-	-	Protein of unknown function (DUF805)
CLEDNEIB_00476	5.83e-87	rpsI	-	-	J	ko:K02996	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uS9 family
CLEDNEIB_00477	6.51e-103	rplM	-	-	J	ko:K02871	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
CLEDNEIB_00478	1.23e-182	truA	5.4.99.12	-	J	ko:K06173	-	ko00000,ko01000,ko03016	Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
CLEDNEIB_00479	1.05e-178	ecfT	-	-	U	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
CLEDNEIB_00480	7.19e-191	ecfA2	-	-	P	ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
CLEDNEIB_00481	2.69e-195	ecfA1	-	-	P	ko:K16786	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
CLEDNEIB_00482	1.83e-79	rplQ	-	-	J	ko:K02879	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L17
CLEDNEIB_00483	3.62e-218	rpoA	2.7.7.6	-	K	ko:K03040	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
CLEDNEIB_00484	3.82e-82	rpsK	-	-	J	ko:K02948	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
CLEDNEIB_00485	1.46e-73	rpsM	-	-	J	ko:K02952	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
CLEDNEIB_00486	1.89e-21	rpmJ	-	-	J	ko:K02919	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL36 family
CLEDNEIB_00487	5.22e-45	infA	-	-	J	ko:K02518	-	ko00000,ko03012	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
CLEDNEIB_00488	2.61e-155	adk	2.7.4.3	-	F	ko:K00939	ko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
CLEDNEIB_00489	5.1e-301	secY	-	-	U	ko:K03076	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
CLEDNEIB_00490	1.73e-93	rplO	-	-	J	ko:K02876	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to the 23S rRNA
CLEDNEIB_00491	2.22e-34	rpmD	-	-	J	ko:K02907	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L30
CLEDNEIB_00492	2.63e-110	rpsE	-	-	J	ko:K02988	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
CLEDNEIB_00493	3.67e-73	rplR	-	-	J	ko:K02881	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
CLEDNEIB_00494	5.05e-121	rplF	-	-	J	ko:K02933	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
CLEDNEIB_00495	2.28e-89	rpsH	-	-	J	ko:K02994	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
CLEDNEIB_00496	1e-39	rpsN	-	-	J	ko:K02954	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
CLEDNEIB_00497	7.13e-123	rplE	-	-	J	ko:K02931	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
CLEDNEIB_00498	1.64e-43	rplX	-	-	J	ko:K02895	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
CLEDNEIB_00499	2.1e-78	rplN	-	-	J	ko:K02874	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
CLEDNEIB_00500	1.56e-55	rpsQ	-	-	J	ko:K02961	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
CLEDNEIB_00501	1.45e-34	rpmC	-	-	J	ko:K02904	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uL29 family
CLEDNEIB_00502	1.66e-100	rplP	-	-	J	ko:K02878	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
CLEDNEIB_00503	1.75e-156	rpsC	-	-	J	ko:K02982	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
CLEDNEIB_00504	9.07e-73	rplV	-	-	J	ko:K02890	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
CLEDNEIB_00505	1.24e-61	rpsS	-	-	J	ko:K02965	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
CLEDNEIB_00506	1.63e-197	rplB	-	-	J	ko:K02886	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
CLEDNEIB_00507	4.67e-63	rplW	-	-	J	ko:K02892	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
CLEDNEIB_00508	5.47e-137	rplD	-	-	J	ko:K02926	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the polypeptide exit tunnel
CLEDNEIB_00509	3.29e-146	rplC	-	-	J	ko:K02906	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
CLEDNEIB_00510	6.34e-66	rpsJ	-	-	J	ko:K02946	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Involved in the binding of tRNA to the ribosomes
CLEDNEIB_00511	0.0	rpoC	2.7.7.6	-	K	ko:K03046	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
CLEDNEIB_00512	0.0	rpoB	2.7.7.6	-	K	ko:K03043	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
CLEDNEIB_00513	0.0	clpC	-	-	O	ko:K03696	ko01100,map01100	ko00000,ko03110	Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
CLEDNEIB_00514	7.84e-106	ytsP	1.8.4.14	-	T	ko:K08968	ko00270,map00270	ko00000,ko00001,ko01000	GAF domain-containing protein
CLEDNEIB_00517	3.94e-37	-	-	-	-	-	-	-	-
CLEDNEIB_00519	0.0	lysS	6.1.1.6	-	J	ko:K04567	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-II aminoacyl-tRNA synthetase family
CLEDNEIB_00520	1.13e-247	dus	-	-	J	ko:K05540	-	ko00000,ko01000,ko03016	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
CLEDNEIB_00521	5.97e-209	hslO	-	-	O	ko:K04083	-	ko00000,ko03110	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
CLEDNEIB_00522	0.0	ftsH	-	-	O	ko:K03798	-	ko00000,ko00002,ko01000,ko01002,ko03110	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
CLEDNEIB_00523	2.52e-309	tilS	2.4.2.8, 6.3.4.19	-	J	ko:K04075,ko:K15780	ko00230,ko01100,ko01110,map00230,map01100,map01110	ko00000,ko00001,ko01000,ko03016	Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
CLEDNEIB_00524	5.19e-78	-	-	-	J	ko:K07571	-	ko00000	S1 RNA binding domain
CLEDNEIB_00525	3.06e-77	divIC	-	-	D	ko:K13052	-	ko00000,ko03036	Septum formation initiator
CLEDNEIB_00526	1.26e-46	yabO	-	-	J	-	-	-	S4 domain protein
CLEDNEIB_00527	0.0	mfd	-	-	L	ko:K03723	ko03420,map03420	ko00000,ko00001,ko01000,ko03400	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
CLEDNEIB_00528	1.55e-133	pth	3.1.1.29	-	J	ko:K01056	-	ko00000,ko01000,ko03012	The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
CLEDNEIB_00529	3.42e-233	ldh	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	Belongs to the LDH MDH superfamily. LDH family
CLEDNEIB_00530	2.39e-164	-	-	-	S	-	-	-	(CBS) domain
CLEDNEIB_00531	2.05e-120	-	-	-	K	-	-	-	transcriptional regulator
CLEDNEIB_00532	1.33e-275	alr	5.1.1.1, 5.1.1.5	-	E	ko:K01775,ko:K20707	ko00473,ko01100,ko01502,map00473,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
CLEDNEIB_00533	6.61e-80	acpS	2.7.8.7	-	I	ko:K00997	ko00770,map00770	ko00000,ko00001,ko01000	Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
CLEDNEIB_00534	0.0	cshA	3.6.4.13	-	F	ko:K05592	ko03018,map03018	ko00000,ko00001,ko01000,ko03009,ko03019	DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
CLEDNEIB_00535	0.0	murF	6.3.2.10	-	M	ko:K01929	ko00300,ko00550,ko01100,ko01502,map00300,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
CLEDNEIB_00536	6.18e-52	rpmE	-	-	J	ko:K02909	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L31
CLEDNEIB_00537	5.09e-200	yhaX	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
CLEDNEIB_00538	7.25e-45	-	-	-	S	-	-	-	Uncharacterised protein family (UPF0236)
CLEDNEIB_00539	6.96e-207	ksgA	2.1.1.182	-	J	ko:K02528	-	ko00000,ko01000,ko03009	Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
CLEDNEIB_00540	2.1e-128	rnmV	3.1.26.8	-	J	ko:K05985	-	ko00000,ko01000	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
CLEDNEIB_00541	3.86e-189	tatD	-	-	L	ko:K03424	-	ko00000,ko01000	hydrolase, TatD family
CLEDNEIB_00542	0.0	metG	6.1.1.10	-	J	ko:K01874	ko00450,ko00970,map00450,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CLEDNEIB_00543	0.0	mgtA	3.6.3.2	-	P	ko:K01531	-	ko00000,ko01000	COG0474 Cation transport ATPase
CLEDNEIB_00544	4.07e-141	-	-	-	S	ko:K06872	-	ko00000	TPM domain
CLEDNEIB_00545	6.34e-118	comEB	3.5.4.12	-	F	ko:K01493	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko02044	MafB19-like deaminase
CLEDNEIB_00546	2.35e-244	trpS	6.1.1.2	-	J	ko:K01867	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-I aminoacyl-tRNA synthetase family
CLEDNEIB_00547	2.55e-148	-	-	-	E	-	-	-	Belongs to the SOS response-associated peptidase family
CLEDNEIB_00549	6.33e-148	-	-	-	-	-	-	-	-
CLEDNEIB_00550	1.57e-97	greA	-	-	K	ko:K03624	-	ko00000,ko03021	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
CLEDNEIB_00551	1.75e-95	hsp	-	-	O	ko:K13993	ko04141,map04141	ko00000,ko00001,ko03110	Belongs to the small heat shock protein (HSP20) family
CLEDNEIB_00552	0.0	pepE	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	aminopeptidase
CLEDNEIB_00553	3.09e-267	guaB	1.1.1.205	-	F	ko:K00088	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
CLEDNEIB_00554	4e-152	ypgQ	-	-	S	ko:K06950	-	ko00000	Metal dependent phosphohydrolases with conserved 'HD' motif.
CLEDNEIB_00555	0.0	pepC1	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	aminopeptidase
CLEDNEIB_00557	1.85e-28	-	-	-	-	-	-	-	-
CLEDNEIB_00558	6.28e-310	tyrS	6.1.1.1	-	J	ko:K01866	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
CLEDNEIB_00559	0.0	-	-	-	S	-	-	-	Fibronectin type III domain
CLEDNEIB_00560	0.0	XK27_08315	-	-	M	-	-	-	Sulfatase
CLEDNEIB_00561	3.19e-145	plsY1	2.3.1.15	-	I	ko:K08591	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
CLEDNEIB_00562	1.06e-257	brpA	-	-	K	-	-	-	Cell envelope-like function transcriptional attenuator common domain protein
CLEDNEIB_00563	4.62e-131	-	-	-	G	-	-	-	Aldose 1-epimerase
CLEDNEIB_00564	1.41e-141	pcp	3.4.19.3	-	O	ko:K01304	-	ko00000,ko01000,ko01002	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
CLEDNEIB_00565	1.84e-170	gpmA	5.4.2.11	-	G	ko:K01834	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
CLEDNEIB_00566	8.29e-173	-	-	-	-	-	-	-	-
CLEDNEIB_00567	3.43e-68	-	-	-	-	-	-	-	-
CLEDNEIB_00568	2.91e-108	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
CLEDNEIB_00572	1.13e-114	-	-	-	S	-	-	-	Bacterial membrane protein, YfhO
CLEDNEIB_00573	5.53e-125	-	-	-	-	ko:K19167	-	ko00000,ko02048	-
CLEDNEIB_00574	0.0	valS	6.1.1.9	-	J	ko:K01873	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
CLEDNEIB_00575	8.83e-303	folC	6.3.2.12, 6.3.2.17	-	H	ko:K11754	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the folylpolyglutamate synthase family
CLEDNEIB_00576	4.33e-162	-	-	-	S	-	-	-	Haloacid dehalogenase-like hydrolase
CLEDNEIB_00577	3.32e-148	radC	-	-	L	ko:K03630	-	ko00000	DNA repair protein
CLEDNEIB_00578	1.01e-226	mreB	-	-	D	ko:K03569	-	ko00000,ko02048,ko03036,ko04812	cell shape determining protein MreB
CLEDNEIB_00579	7.09e-190	mreC	-	-	M	ko:K03570	-	ko00000,ko03036	Involved in formation and maintenance of cell shape
CLEDNEIB_00580	8.04e-124	mreD	-	-	-	ko:K03571	-	ko00000,ko03036	-
CLEDNEIB_00581	1.09e-18	-	-	-	S	-	-	-	Protein of unknown function (DUF4044)
CLEDNEIB_00582	4.46e-72	-	-	-	S	-	-	-	Protein of unknown function (DUF3397)
CLEDNEIB_00583	3.81e-100	mraZ	-	-	K	ko:K03925	-	ko00000	Belongs to the MraZ family
CLEDNEIB_00584	3.29e-234	rsmH	2.1.1.199	-	J	ko:K03438	-	ko00000,ko01000,ko03009	Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
CLEDNEIB_00585	5.18e-69	ftsL	-	-	D	-	-	-	Cell division protein FtsL
CLEDNEIB_00586	0.0	pbpX	-	-	M	ko:K08724,ko:K12552,ko:K12556	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01011	Penicillin-binding Protein
CLEDNEIB_00587	3.96e-227	mraY	2.7.8.13	-	M	ko:K01000	ko00550,ko01100,ko01502,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
CLEDNEIB_00588	0.0	murD	6.3.2.9	-	M	ko:K01925	ko00471,ko00550,ko01100,map00471,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
CLEDNEIB_00589	4.23e-268	murG	2.4.1.227	GT28	M	ko:K02563	ko00550,ko01100,ko01502,ko04112,map00550,map01100,map01502,map04112	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
CLEDNEIB_00590	1.4e-181	divIB	-	-	D	ko:K03589	ko04112,map04112	ko00000,ko00001,ko03036	Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
CLEDNEIB_00591	2.46e-305	ftsA	-	-	D	ko:K03590	ko04112,map04112	ko00000,ko00001,ko03036,ko04812	Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
CLEDNEIB_00592	1.93e-262	ftsZ	-	-	D	ko:K03531	ko04112,map04112	ko00000,ko00001,ko02048,ko03036,ko04812	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
CLEDNEIB_00593	1.26e-95	sepF	-	-	D	ko:K09772	-	ko00000,ko03036	Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
CLEDNEIB_00594	5.07e-62	yggT	-	-	S	ko:K02221	-	ko00000,ko02044	YGGT family
CLEDNEIB_00595	8.08e-192	ylmH	-	-	S	-	-	-	S4 domain protein
CLEDNEIB_00596	3.52e-150	divIVA	-	-	D	ko:K04074	-	ko00000,ko03036	DivIVA domain protein
CLEDNEIB_00597	0.0	ileS	6.1.1.5	-	J	ko:K01870	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
CLEDNEIB_00598	1.15e-43	cspA	-	-	K	ko:K03704	-	ko00000,ko03000	'Cold-shock' DNA-binding domain
CLEDNEIB_00599	6.29e-135	nudF	3.6.1.13	-	L	ko:K01515	ko00230,map00230	ko00000,ko00001,ko01000	ADP-ribose pyrophosphatase
CLEDNEIB_00600	1.28e-56	-	-	-	-	-	-	-	-
CLEDNEIB_00601	1.69e-162	mtnN	3.2.2.9	-	E	ko:K01243	ko00270,ko01100,ko01230,map00270,map01100,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
CLEDNEIB_00602	1.33e-275	iscS	2.8.1.7	-	E	ko:K04487	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko02048,ko03016,ko03029	Aminotransferase class V
CLEDNEIB_00603	4.07e-74	XK27_04120	-	-	S	-	-	-	Putative amino acid metabolism
CLEDNEIB_00604	1.56e-278	mnmA	2.8.1.13	-	J	ko:K00566	ko04122,map04122	ko00000,ko00001,ko01000,ko03016	Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
CLEDNEIB_00605	3.18e-161	pgm	-	-	G	-	-	-	Phosphoglycerate mutase family
CLEDNEIB_00606	1.24e-126	-	-	-	S	-	-	-	repeat protein
CLEDNEIB_00607	0.0	recD2	3.1.11.5	-	L	ko:K03581	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
CLEDNEIB_00608	4.59e-135	ytlR	-	-	I	-	-	-	Diacylglycerol kinase catalytic domain
CLEDNEIB_00609	7.34e-35	ytlR	-	-	I	-	-	-	Diacylglycerol kinase catalytic domain
CLEDNEIB_00610	0.0	rnjA	-	-	J	ko:K12574	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
CLEDNEIB_00611	9e-46	ykzG	-	-	S	-	-	-	Belongs to the UPF0356 family
CLEDNEIB_00612	5.41e-129	def	3.5.1.88	-	J	ko:K01462	-	ko00000,ko01000	Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
CLEDNEIB_00613	0.0	typA	-	-	T	ko:K06207	-	ko00000	GTP-binding protein TypA
CLEDNEIB_00614	2.72e-263	ftsW	-	-	D	ko:K03588	ko04112,map04112	ko00000,ko00001,ko02000,ko03036	Belongs to the SEDS family
CLEDNEIB_00615	1.72e-71	ylbG	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2129)
CLEDNEIB_00616	2.04e-123	rsmD	2.1.1.171	-	L	ko:K08316	-	ko00000,ko01000,ko03009	RNA methyltransferase, RsmD family
CLEDNEIB_00617	6.77e-111	coaD	2.7.7.3	-	H	ko:K00954	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
CLEDNEIB_00618	7.89e-245	lon	-	-	T	ko:K07177	ko02024,map02024	ko00000,ko00001,ko01002	Belongs to the peptidase S16 family
CLEDNEIB_00619	1.63e-128	comEA	-	-	L	ko:K02237	-	ko00000,ko00002,ko02044	Competence protein ComEA
CLEDNEIB_00620	0.0	comEC	-	-	S	ko:K02238	-	ko00000,ko00002,ko02044	Competence protein ComEC
CLEDNEIB_00621	2.46e-224	holA	2.7.7.7	-	L	ko:K02340	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III delta subunit
CLEDNEIB_00622	4.42e-47	rpsT	-	-	J	ko:K02968	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 16S ribosomal RNA
CLEDNEIB_00623	1.48e-57	rpsO	-	-	J	ko:K02956	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
CLEDNEIB_00624	0.0	rnjB	-	-	J	ko:K12574	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
CLEDNEIB_00625	3.27e-192	-	-	-	-	-	-	-	-
CLEDNEIB_00626	5.52e-285	tuf	-	-	J	ko:K02358,ko:K15771	ko02010,map02010	ko00000,ko00001,ko00002,ko02000,ko03012,ko03029,ko04147	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
CLEDNEIB_00627	5.53e-276	tig	-	-	D	ko:K03545	-	ko00000	Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
CLEDNEIB_00628	1.1e-296	clpX	-	-	O	ko:K03544	ko04112,map04112	ko00000,ko00001,ko03110	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
CLEDNEIB_00629	1.07e-134	engB	-	-	D	ko:K03978	-	ko00000,ko03036	Necessary for normal cell division and for the maintenance of normal septation
CLEDNEIB_00630	0.0	potE	-	-	E	-	-	-	Amino Acid
CLEDNEIB_00631	2.34e-241	dapF	5.1.1.7	-	E	ko:K01778	ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
CLEDNEIB_00632	0.0	lysC	2.7.2.4	-	E	ko:K00928	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the aspartokinase family
CLEDNEIB_00633	7.59e-316	lysA	4.1.1.20	-	E	ko:K01586	ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
CLEDNEIB_00634	2.94e-108	dapH	2.3.1.117, 2.3.1.89	-	E	ko:K00674,ko:K05822	ko00300,ko01100,ko01110,ko01120,ko01230,map00300,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
CLEDNEIB_00635	1.15e-280	hipO	3.5.1.47	-	E	ko:K05823	ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000,ko01002	Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
CLEDNEIB_00636	2.2e-223	dapA	4.3.3.7	-	E	ko:K01714	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CLEDNEIB_00637	1.1e-181	dapB	1.17.1.8	-	E	ko:K00215	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
CLEDNEIB_00638	1.74e-271	aspC	-	-	E	ko:K00841	ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase
CLEDNEIB_00639	1.74e-252	asd	1.2.1.11	-	E	ko:K00133	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
CLEDNEIB_00640	1.92e-263	pbpX1	-	-	V	-	-	-	Beta-lactamase
CLEDNEIB_00641	4e-140	yjhB	3.6.1.13	-	F	ko:K01515	ko00230,map00230	ko00000,ko00001,ko01000	NUDIX domain
CLEDNEIB_00642	0.0	-	-	-	I	-	-	-	Protein of unknown function (DUF2974)
CLEDNEIB_00643	8.69e-49	-	-	-	C	-	-	-	FMN_bind
CLEDNEIB_00644	6.38e-108	-	-	-	-	-	-	-	-
CLEDNEIB_00645	1.88e-223	iunH	3.2.2.1	-	F	ko:K01239	ko00230,ko00760,ko01100,map00230,map00760,map01100	ko00000,ko00001,ko01000	inosine-uridine preferring nucleoside hydrolase
CLEDNEIB_00646	1.6e-218	ydhF	-	-	S	-	-	-	Aldo keto reductase
CLEDNEIB_00647	0.0	pbg4	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
CLEDNEIB_00648	2.72e-149	-	-	-	K	ko:K03492	-	ko00000,ko03000	UTRA domain
CLEDNEIB_00650	8.98e-47	glcD	1.1.3.15	-	C	ko:K00104	ko00630,ko01100,ko01110,ko01120,ko01130,map00630,map01100,map01110,map01120,map01130	ko00000,ko00001,ko01000	FAD linked oxidases, C-terminal domain
CLEDNEIB_00651	2.74e-122	glcD	1.1.3.15	-	C	ko:K00104	ko00630,ko01100,ko01110,ko01120,ko01130,map00630,map01100,map01110,map01120,map01130	ko00000,ko00001,ko01000	FAD linked oxidases, C-terminal domain
CLEDNEIB_00652	6.31e-28	glcD	1.1.3.15	-	C	ko:K00104	ko00630,ko01100,ko01110,ko01120,ko01130,map00630,map01100,map01110,map01120,map01130	ko00000,ko00001,ko01000	FAD linked oxidases, C-terminal domain
CLEDNEIB_00653	1.34e-26	glcD	1.1.3.15	-	C	ko:K00104	ko00630,ko01100,ko01110,ko01120,ko01130,map00630,map01100,map01110,map01120,map01130	ko00000,ko00001,ko01000	FAD linked oxidases, C-terminal domain
CLEDNEIB_00654	1.97e-140	pncA	-	-	Q	-	-	-	Isochorismatase family
CLEDNEIB_00655	0.0	nadC2	6.3.4.21	-	F	ko:K00763	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
CLEDNEIB_00656	1.05e-162	-	-	-	F	-	-	-	NUDIX domain
CLEDNEIB_00658	1.37e-94	-	-	-	S	-	-	-	Iron-sulphur cluster biosynthesis
CLEDNEIB_00659	3e-308	amt	-	-	P	ko:K03320	-	ko00000,ko02000	ammonium transporter
CLEDNEIB_00660	1.18e-99	-	-	-	S	-	-	-	Uncharacterised protein family (UPF0236)
CLEDNEIB_00661	8.58e-290	pbuG	-	-	S	ko:K06901	-	ko00000,ko02000	permease
CLEDNEIB_00662	4.12e-47	-	-	-	-	-	-	-	-
CLEDNEIB_00663	2.02e-101	atkY	-	-	K	ko:K02171	ko01501,map01501	ko00000,ko00001,ko00002,ko01504,ko03000	Penicillinase repressor
CLEDNEIB_00664	2.08e-84	-	-	-	S	-	-	-	Cupredoxin-like domain
CLEDNEIB_00665	1.81e-64	-	-	-	S	-	-	-	Cupredoxin-like domain
CLEDNEIB_00666	0.0	copA	3.6.3.3, 3.6.3.4, 3.6.3.5, 3.6.3.54	-	P	ko:K01533,ko:K01534,ko:K17686	ko01524,ko04016,map01524,map04016	ko00000,ko00001,ko01000	P-type ATPase
CLEDNEIB_00667	4.08e-21	-	-	-	EGP	ko:K08368	-	ko00000,ko02000	Sugar (and other) transporter
CLEDNEIB_00668	5.89e-48	-	-	-	EGP	ko:K08368	-	ko00000,ko02000	Sugar (and other) transporter
CLEDNEIB_00669	4.61e-99	-	-	-	EGP	ko:K08368	-	ko00000,ko02000	Sugar (and other) transporter
CLEDNEIB_00670	6.46e-27	-	-	-	-	-	-	-	-
CLEDNEIB_00671	6.76e-269	-	-	-	-	-	-	-	-
CLEDNEIB_00672	0.0	eriC	-	-	P	ko:K03281	-	ko00000	chloride
CLEDNEIB_00673	0.0	gnd	1.1.1.343, 1.1.1.44	-	H	ko:K00033	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
CLEDNEIB_00674	0.0	gidA	-	-	D	ko:K03495	-	ko00000,ko03016,ko03036	NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
CLEDNEIB_00675	0.0	mnmE	-	-	S	ko:K03650	-	ko00000,ko01000,ko03016	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
CLEDNEIB_00676	5.34e-189	yidC	-	-	U	ko:K03217	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044,ko03029	Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
CLEDNEIB_00677	1.31e-81	rnpA	3.1.26.5	-	J	ko:K03536	-	ko00000,ko01000,ko03016	RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
CLEDNEIB_00678	3.26e-23	rpmH	-	-	J	ko:K02914	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL34 family
CLEDNEIB_00679	0.0	dnaA	-	-	L	ko:K02313	ko02020,ko04112,map02020,map04112	ko00000,ko00001,ko03032,ko03036	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
CLEDNEIB_00680	4.3e-256	dnaN	2.7.7.7	-	L	ko:K02338	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
CLEDNEIB_00681	4.08e-47	yaaA	-	-	S	ko:K14761	-	ko00000,ko03009	S4 domain protein YaaA
CLEDNEIB_00682	2.09e-267	recF	-	-	L	ko:K03629	ko03440,map03440	ko00000,ko00001,ko03400	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
CLEDNEIB_00683	0.0	gyrB	5.99.1.3	-	L	ko:K02470	-	ko00000,ko01000,ko03032,ko03400	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
CLEDNEIB_00684	0.0	gyrA	5.99.1.3	-	L	ko:K02469	-	ko00000,ko01000,ko03032,ko03400	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
CLEDNEIB_00685	1.93e-65	rpsF	-	-	J	ko:K02990	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Binds together with S18 to 16S ribosomal RNA
CLEDNEIB_00686	7.17e-110	ssb	-	-	L	ko:K03111	ko03030,ko03430,ko03440,map03030,map03430,map03440	ko00000,ko00001,ko03029,ko03032,ko03400	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
CLEDNEIB_00687	1.89e-47	rpsR	-	-	J	ko:K02963	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
CLEDNEIB_00688	9.05e-08	-	-	-	-	-	-	-	-
CLEDNEIB_00689	9.17e-131	tnpR	-	-	L	-	-	-	Resolvase, N terminal domain
CLEDNEIB_00690	2.69e-167	-	-	-	S	-	-	-	Phage Mu protein F like protein
CLEDNEIB_00691	3.62e-22	ytgB	-	-	S	-	-	-	Transglycosylase associated protein
CLEDNEIB_00692	1.16e-158	tnp1216	-	-	L	ko:K07498	-	ko00000	DDE domain
CLEDNEIB_00693	2.25e-72	pinR1	-	-	L	-	-	-	Helix-turn-helix domain of Hin and related proteins, a family of DNA-binding domains unique to bacteria and represented by the Hin protein of Salmonella. The basic HTH domain is a simple fold comprised of three core helices that form a right-handed
CLEDNEIB_00694	5.19e-113	-	-	-	L	-	-	-	Transposase DDE domain
CLEDNEIB_00697	2.08e-202	-	-	-	K	-	-	-	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
CLEDNEIB_00698	2.71e-211	-	2.7.7.7	-	L	ko:K02342	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	EXOIII
CLEDNEIB_00699	2.53e-204	endA	-	-	F	ko:K15051	-	ko00000	DNA RNA non-specific endonuclease
CLEDNEIB_00700	0.0	pepD1	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
CLEDNEIB_00701	7.73e-256	malK	-	-	P	ko:K10112,ko:K17240	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ATPases associated with a variety of cellular activities
CLEDNEIB_00702	1.91e-201	-	-	-	P	ko:K02025	-	ko00000,ko00002,ko02000	ABC-type sugar transport systems, permease components
CLEDNEIB_00703	5.62e-187	-	-	-	P	ko:K02026	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
CLEDNEIB_00704	0.0	-	-	-	S	-	-	-	Zn-dependent metallo-hydrolase RNA specificity domain
CLEDNEIB_00705	1.17e-307	-	-	-	G	ko:K02027	-	ko00000,ko00002,ko02000	Bacterial extracellular solute-binding protein
CLEDNEIB_00706	1.59e-213	corA	-	-	P	ko:K03284	-	ko00000,ko02000	CorA-like Mg2+ transporter protein
CLEDNEIB_00707	1.97e-208	-	3.5.2.6	-	V	ko:K17836	ko00311,ko01130,ko01501,map00311,map01130,map01501	ko00000,ko00001,ko00002,ko01000,ko01504	Beta-lactamase enzyme family
CLEDNEIB_00708	5.77e-127	yobS	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
CLEDNEIB_00709	0.0	ydgH	-	-	S	ko:K06994	-	ko00000	MMPL family
CLEDNEIB_00710	3.12e-203	-	-	-	-	-	-	-	-
CLEDNEIB_00711	0.0	gabD	1.2.1.16, 1.2.1.20, 1.2.1.79	-	C	ko:K00135	ko00250,ko00310,ko00350,ko00650,ko00760,ko01100,ko01120,map00250,map00310,map00350,map00650,map00760,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Belongs to the aldehyde dehydrogenase family
CLEDNEIB_00712	6.86e-163	plcR	-	-	K	ko:K20480	ko02024,map02024	ko00000,ko00001,ko03000	Helix-turn-helix
CLEDNEIB_00713	4.19e-198	-	-	-	I	-	-	-	alpha/beta hydrolase fold
CLEDNEIB_00714	4.53e-139	-	-	-	S	-	-	-	SNARE associated Golgi protein
CLEDNEIB_00715	1.13e-125	yjcK	2.3.1.128	-	J	ko:K03790	-	ko00000,ko01000,ko03009	Acetyltransferase (GNAT) domain
CLEDNEIB_00716	0.0	serS	6.1.1.11	-	J	ko:K01875	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
CLEDNEIB_00717	3.46e-241	gpsA	1.1.1.94	-	I	ko:K00057	ko00564,ko01110,map00564,map01110	ko00000,ko00001,ko01000	Glycerol-3-phosphate dehydrogenase
CLEDNEIB_00718	3.9e-191	lgt	-	-	M	ko:K13292	-	ko00000,ko01000	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
CLEDNEIB_00719	9.73e-228	hprK	-	-	F	ko:K06023	-	ko00000,ko01000	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
CLEDNEIB_00720	9.21e-50	-	-	-	-	-	-	-	-
CLEDNEIB_00721	2.93e-236	prfB	-	-	J	ko:K02836	-	ko00000,ko03012	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
CLEDNEIB_00722	0.0	secA	-	-	U	ko:K03070	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
CLEDNEIB_00723	3.81e-123	hpf	-	-	J	ko:K05808	-	ko00000,ko03009	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
CLEDNEIB_00724	4.17e-172	comFC	-	-	S	ko:K02242	-	ko00000,ko00002,ko02044	Competence protein
CLEDNEIB_00725	1.01e-310	comFA	-	-	L	ko:K02240	-	ko00000,ko00002,ko02044	Helicase C-terminal domain protein
CLEDNEIB_00726	2.4e-152	yvyE	3.4.13.9	-	S	ko:K01271	-	ko00000,ko01000,ko01002	YigZ family
CLEDNEIB_00727	3.21e-267	tagO	2.7.8.33, 2.7.8.35	-	M	ko:K02851	-	ko00000,ko01000,ko01003,ko01005	transferase
CLEDNEIB_00728	2.48e-285	rny	-	-	S	ko:K18682	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	Endoribonuclease that initiates mRNA decay
CLEDNEIB_00729	8.88e-248	recA	-	-	L	ko:K03553	ko03440,map03440	ko00000,ko00001,ko00002,ko03400	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
CLEDNEIB_00730	3e-127	pgsA	2.7.8.5	-	I	ko:K00995	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
CLEDNEIB_00731	1.33e-186	ymfM	-	-	S	ko:K15539	-	ko00000	Helix-turn-helix domain
CLEDNEIB_00732	1.14e-170	fabG	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Enoyl-(Acyl carrier protein) reductase
CLEDNEIB_00733	1.24e-299	ymfH	-	-	S	-	-	-	Peptidase M16
CLEDNEIB_00734	2.34e-288	ymfF	-	-	S	-	-	-	Peptidase M16 inactive domain protein
CLEDNEIB_00735	0.0	ftsK	-	-	D	ko:K03466	-	ko00000,ko03036	Belongs to the FtsK SpoIIIE SftA family
CLEDNEIB_00736	4.46e-90	WQ51_03320	-	-	S	-	-	-	Protein of unknown function (DUF1149)
CLEDNEIB_00737	1.23e-135	cspR	2.1.1.207	-	J	ko:K03216	-	ko00000,ko01000,ko03016	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
CLEDNEIB_00738	8.55e-270	XK27_05220	-	-	S	-	-	-	AI-2E family transporter
CLEDNEIB_00739	1.35e-85	srlB	2.7.1.198	-	G	ko:K02781	ko00051,ko02060,map00051,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system glucitol/sorbitol-specific IIA component
CLEDNEIB_00740	0.0	pacL	-	-	P	-	-	-	Cation transporter/ATPase, N-terminus
CLEDNEIB_00741	1.75e-256	pgl	3.1.1.31	-	G	ko:K07404	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Lactonase, 7-bladed beta-propeller
CLEDNEIB_00742	6.52e-59	-	-	-	S	-	-	-	SNARE associated Golgi protein
CLEDNEIB_00743	5.71e-38	-	-	-	S	-	-	-	SNARE associated Golgi protein
CLEDNEIB_00744	3.79e-141	tag	3.2.2.20	-	L	ko:K01246	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	glycosylase
CLEDNEIB_00745	8.26e-106	-	-	-	-	-	-	-	-
CLEDNEIB_00746	0.0	-	-	-	S	-	-	-	Calcineurin-like phosphoesterase
CLEDNEIB_00747	0.0	asnB	6.3.5.4	-	E	ko:K01953	ko00250,ko01100,ko01110,map00250,map01100,map01110	ko00000,ko00001,ko01000,ko01002	Asparagine synthase
CLEDNEIB_00748	0.0	yxbA	6.3.1.12	-	S	ko:K17810	-	ko00000,ko01000	ATP-grasp enzyme
CLEDNEIB_00751	0.0	nrdD	1.1.98.6	-	F	ko:K21636	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Ribonucleoside-triphosphate reductase
CLEDNEIB_00752	1.35e-180	nrdG	1.97.1.4	-	O	ko:K04068	-	ko00000,ko01000	Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
CLEDNEIB_00753	6.51e-128	yitW	-	-	S	-	-	-	Iron-sulfur cluster assembly protein
CLEDNEIB_00754	4.09e-292	XK27_04775	-	-	S	ko:K09155	-	ko00000	PAS domain
CLEDNEIB_00755	1.42e-287	yttB	-	-	EGP	-	-	-	Major Facilitator
CLEDNEIB_00756	0.0	pepO	-	-	O	ko:K07386	-	ko00000,ko01000,ko01002	Peptidase family M13
CLEDNEIB_00757	0.0	kup	-	-	P	ko:K03549	-	ko00000,ko02000	Transport of potassium into the cell
CLEDNEIB_00758	8.43e-113	-	-	-	-	-	-	-	-
CLEDNEIB_00759	7.93e-19	-	-	-	-	-	-	-	-
CLEDNEIB_00760	2.86e-39	-	-	-	-	-	-	-	-
CLEDNEIB_00761	3.68e-50	-	-	-	S	-	-	-	Protein of unknown function (DUF2922)
CLEDNEIB_00762	2.91e-234	-	-	-	S	-	-	-	SLAP domain
CLEDNEIB_00764	9.59e-11	-	-	-	K	-	-	-	DNA-templated transcription, initiation
CLEDNEIB_00765	1.89e-34	-	-	-	K	-	-	-	DNA-templated transcription, initiation
CLEDNEIB_00766	1.05e-124	-	-	-	-	-	-	-	-
CLEDNEIB_00767	1.12e-285	-	-	-	NU	-	-	-	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
CLEDNEIB_00768	1.42e-268	-	3.2.1.96, 3.5.1.28	GH73	M	ko:K01227,ko:K01447,ko:K13714,ko:K13731	ko00511,ko05100,map00511,map05100	ko00000,ko00001,ko01000	N-acetylmuramoyl-L-alanine amidase
CLEDNEIB_00769	0.0	yjbQ	-	-	P	ko:K03455,ko:K03499	-	ko00000,ko02000	TrkA C-terminal domain protein
CLEDNEIB_00770	1.5e-32	-	-	-	K	-	-	-	Protein of unknown function (DUF4065)
CLEDNEIB_00771	4.01e-119	-	-	-	K	-	-	-	Protein of unknown function (DUF4065)
CLEDNEIB_00772	0.0	uvrC	-	-	L	ko:K03703	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
CLEDNEIB_00773	1.55e-308	obg	-	-	S	ko:K03979	-	ko00000,ko01000,ko03009	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
CLEDNEIB_00774	0.0	oatA	-	-	I	-	-	-	Acyltransferase
CLEDNEIB_00775	3.02e-226	rnz	3.1.26.11	-	J	ko:K00784	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
CLEDNEIB_00776	7.14e-185	-	-	-	S	ko:K07124	-	ko00000	Belongs to the short-chain dehydrogenases reductases (SDR) family
CLEDNEIB_00777	6.62e-48	-	-	-	S	-	-	-	Lipopolysaccharide assembly protein A domain
CLEDNEIB_00778	3.62e-38	rpmF	-	-	J	ko:K02911	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Belongs to the bacterial ribosomal protein bL32 family
CLEDNEIB_00779	0.0	yfkN	3.1.3.6, 3.1.4.16	-	F	ko:K01119	ko00230,ko00240,map00230,map00240	ko00000,ko00001,ko01000	Belongs to the 5'-nucleotidase family
CLEDNEIB_00780	9.47e-43	-	-	-	S	-	-	-	Protein of unknown function (DUF2929)
CLEDNEIB_00781	0.0	dnaE	2.7.7.7	-	L	ko:K02337	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase
CLEDNEIB_00782	6.65e-234	pfkA	2.7.1.11	-	F	ko:K00850	ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04152,ko05230,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04152,map05230	ko00000,ko00001,ko00002,ko01000,ko01009,ko03019	Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
CLEDNEIB_00783	0.0	pyk	2.7.1.40	-	G	ko:K00873	ko00010,ko00230,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko04930,ko05165,ko05203,ko05230,map00010,map00230,map00620,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map04930,map05165,map05203,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Belongs to the pyruvate kinase family
CLEDNEIB_00784	1.26e-215	yitL	-	-	S	ko:K00243	-	ko00000	S1 domain
CLEDNEIB_00785	1.48e-216	xerD	-	-	D	ko:K04763	-	ko00000,ko03036	recombinase XerD
CLEDNEIB_00786	1.62e-80	ribT	-	-	K	ko:K02859	-	ko00000	COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
CLEDNEIB_00787	1.22e-167	scpA	-	-	D	ko:K05896	-	ko00000,ko03036	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
CLEDNEIB_00788	1.16e-134	scpB	-	-	D	ko:K06024	-	ko00000,ko03036	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
CLEDNEIB_00789	3.66e-165	rluB	5.4.99.22	-	J	ko:K06178	-	ko00000,ko01000,ko03009	Belongs to the pseudouridine synthase RsuA family
CLEDNEIB_00790	1.31e-149	ribU	-	-	U	-	-	-	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
CLEDNEIB_00791	3.4e-56	-	-	-	M	-	-	-	Lysin motif
CLEDNEIB_00792	2.57e-149	cmk	2.7.4.25	-	F	ko:K00945	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the cytidylate kinase family. Type 1 subfamily
CLEDNEIB_00793	6.32e-274	rpsA	-	-	J	ko:K02945	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein S1
CLEDNEIB_00794	1.82e-312	der	-	-	S	ko:K03977	-	ko00000,ko03009	GTPase that plays an essential role in the late steps of ribosome biogenesis
CLEDNEIB_00795	1.17e-56	hup	-	-	L	ko:K03530	-	ko00000,ko03032,ko03036,ko03400	Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
CLEDNEIB_00796	3.68e-295	XK27_05225	-	-	S	-	-	-	Tetratricopeptide repeat protein
CLEDNEIB_00797	8.42e-204	XK27_10395	-	-	S	-	-	-	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CLEDNEIB_00798	4.4e-288	cca	2.7.7.72	-	J	ko:K00974	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
CLEDNEIB_00800	9.99e-40	cspA	-	-	K	ko:K03704	-	ko00000,ko03000	Cold shock protein
CLEDNEIB_00801	2.92e-311	tnp2	-	-	L	-	-	-	PFAM Transposase, IS204 IS1001 IS1096 IS1165
CLEDNEIB_00802	3.49e-220	-	-	-	L	ko:K07482	-	ko00000	PFAM Integrase, catalytic core
CLEDNEIB_00803	1.43e-117	ydhK	-	-	M	-	-	-	Protein of unknown function (DUF1541)
CLEDNEIB_00804	1.01e-51	pspC	-	-	KT	ko:K03973	-	ko00000,ko02048,ko03000	PspC domain protein
CLEDNEIB_00805	2.08e-77	XK27_06915	-	-	K	ko:K10947	-	ko00000,ko03000	transcriptional regulator PadR family
CLEDNEIB_00807	1.26e-85	-	-	-	L	-	-	-	Transposase and inactivated derivatives IS30 family
CLEDNEIB_00808	0.0	rumA_2	2.1.1.190	-	J	ko:K03215	-	ko00000,ko01000,ko03009	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
CLEDNEIB_00809	1.63e-313	nhaC	-	-	C	ko:K03315	-	ko00000,ko02000	Na H antiporter NhaC
CLEDNEIB_00810	9.6e-73	-	-	-	-	-	-	-	-
CLEDNEIB_00811	2.1e-153	ybhL	-	-	S	ko:K06890	-	ko00000	Belongs to the BI1 family
CLEDNEIB_00812	7.86e-147	ybbB	-	-	S	-	-	-	Protein of unknown function (DUF1211)
CLEDNEIB_00813	2.65e-217	dagK	2.7.1.107	-	G	ko:K07029	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko01000	Lipid kinase
CLEDNEIB_00814	0.0	gatB	6.3.5.6, 6.3.5.7	-	J	ko:K02434	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
CLEDNEIB_00815	0.0	gatA	6.3.5.6, 6.3.5.7	-	J	ko:K02433	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
CLEDNEIB_00816	2.94e-66	gatC	6.3.5.6, 6.3.5.7	-	J	ko:K02435	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
CLEDNEIB_00817	1.72e-265	camS	-	-	S	-	-	-	sex pheromone
CLEDNEIB_00818	0.0	ligA	6.5.1.2	-	L	ko:K01972	ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430	ko00000,ko00001,ko01000,ko03032,ko03400	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
CLEDNEIB_00819	0.0	pcrA	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	ATP-dependent DNA helicase
CLEDNEIB_00820	3.4e-145	acmA	3.2.1.17, 3.2.1.96	-	NU	ko:K01185,ko:K01227	ko00511,map00511	ko00000,ko00001,ko01000	mannosyl-glycoprotein
CLEDNEIB_00822	1.34e-113	ydcK	-	-	S	ko:K03095	-	ko00000	Belongs to the SprT family
CLEDNEIB_00823	4.89e-176	-	-	-	M	-	-	-	Glycosyltransferase sugar-binding region containing DXD motif
CLEDNEIB_00824	0.0	epsU	-	-	S	ko:K03328	-	ko00000	Polysaccharide biosynthesis protein
CLEDNEIB_00825	2.11e-286	-	-	-	M	-	-	-	CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
CLEDNEIB_00826	0.0	pacL	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	P-type ATPase
CLEDNEIB_00827	2.93e-67	pacL	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	P-type ATPase
CLEDNEIB_00828	1.23e-74	-	-	-	S	-	-	-	Protein of unknown function (DUF1275)
CLEDNEIB_00829	2.23e-73	-	-	-	K	-	-	-	Helix-turn-helix domain
CLEDNEIB_00830	5.37e-143	ppiB	5.2.1.8	-	G	ko:K03768	-	ko00000,ko01000,ko03110	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
CLEDNEIB_00831	3e-221	ppaC	3.6.1.1	-	C	ko:K15986	ko00190,map00190	ko00000,ko00001,ko01000	inorganic pyrophosphatase
CLEDNEIB_00832	4.25e-219	-	-	-	K	-	-	-	Transcriptional regulator
CLEDNEIB_00833	0.0	parC	-	-	L	ko:K02621	-	ko00000,ko01000,ko02048,ko03032,ko03036	Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
CLEDNEIB_00834	0.0	parE	-	-	L	ko:K02622	-	ko00000,ko01000,ko02048,ko03032,ko03036	Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
CLEDNEIB_00835	1.02e-138	plsY	2.3.1.15	-	I	ko:K08591	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
CLEDNEIB_00836	5.72e-120	snf	-	-	KL	-	-	-	domain protein
CLEDNEIB_00837	1.04e-84	snf	-	-	KL	-	-	-	domain protein
CLEDNEIB_00838	9e-248	snf	-	-	KL	-	-	-	domain protein
CLEDNEIB_00839	2.89e-50	snf	-	-	KL	-	-	-	domain protein
CLEDNEIB_00840	3.72e-22	snf	-	-	KL	-	-	-	domain protein
CLEDNEIB_00841	8.57e-43	-	-	-	-	-	-	-	-
CLEDNEIB_00842	2.94e-24	-	-	-	-	-	-	-	-
CLEDNEIB_00843	9.82e-111	dps	-	-	P	ko:K04047	-	ko00000,ko03036	Belongs to the Dps family
CLEDNEIB_00844	2.62e-121	-	-	-	K	-	-	-	acetyltransferase
CLEDNEIB_00845	5.36e-101	-	-	-	K	-	-	-	COG COG0846 NAD-dependent protein deacetylases, SIR2 family
CLEDNEIB_00846	1.57e-92	-	-	-	K	-	-	-	COG COG0846 NAD-dependent protein deacetylases, SIR2 family
CLEDNEIB_00847	2.32e-61	-	-	-	K	-	-	-	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
CLEDNEIB_00848	1.63e-48	-	-	-	K	-	-	-	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
CLEDNEIB_00849	9.98e-140	-	-	-	K	ko:K09705	-	ko00000	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
CLEDNEIB_00850	4.8e-109	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
CLEDNEIB_00851	1.14e-59	-	1.1.1.3	-	T	ko:K00003,ko:K07166	ko00260,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00270,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	phosphoserine phosphatase activity
CLEDNEIB_00852	9.44e-184	nfrA	1.5.1.38	-	C	ko:K19285	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	nitroreductase
CLEDNEIB_00853	1.97e-75	-	-	-	S	ko:K06889	-	ko00000	Hydrolases of the alpha beta superfamily
CLEDNEIB_00854	4.54e-76	-	-	-	S	-	-	-	Alpha beta hydrolase
CLEDNEIB_00855	4.35e-120	-	-	-	K	-	-	-	Acetyltransferase (GNAT) family
CLEDNEIB_00856	0.0	gshR3	1.8.1.7	-	C	ko:K00383	ko00480,ko04918,map00480,map04918	ko00000,ko00001,ko01000	Glutathione reductase
CLEDNEIB_00858	1.36e-151	-	-	-	L	-	-	-	Integrase
CLEDNEIB_00860	8.72e-172	-	-	-	-	-	-	-	-
CLEDNEIB_00861	9.5e-264	-	-	-	EGP	-	-	-	Major Facilitator Superfamily
CLEDNEIB_00862	3.34e-132	-	-	-	-	-	-	-	-
CLEDNEIB_00863	5.12e-151	-	-	-	S	-	-	-	Fic/DOC family
CLEDNEIB_00864	9.14e-88	-	-	-	-	-	-	-	-
CLEDNEIB_00865	5.1e-102	-	-	-	-	-	-	-	-
CLEDNEIB_00867	3.06e-77	-	-	-	S	ko:K08987	-	ko00000	Protein of unknown function (DUF1304)
CLEDNEIB_00868	6.79e-126	-	-	-	S	ko:K11621	ko02020,map02020	ko00000,ko00001	Putative adhesin
CLEDNEIB_00869	0.0	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
CLEDNEIB_00870	0.0	-	-	-	P	ko:K06148	-	ko00000,ko02000	ABC transporter
CLEDNEIB_00871	2.32e-79	-	-	-	-	-	-	-	-
CLEDNEIB_00872	2.47e-39	-	-	-	D	ko:K04095	-	ko00000,ko03036	Fic/DOC family
CLEDNEIB_00873	9.66e-46	-	-	-	-	-	-	-	-
CLEDNEIB_00874	0.0	pepT	3.4.11.4	-	E	ko:K01258	-	ko00000,ko01000,ko01002	Cleaves the N-terminal amino acid of tripeptides
CLEDNEIB_00875	1.21e-301	mepA	-	-	V	ko:K18908	-	ko00000,ko00002,ko01504,ko02000	MATE efflux family protein
CLEDNEIB_00876	1.43e-294	-	-	-	S	-	-	-	Putative peptidoglycan binding domain
CLEDNEIB_00877	8.22e-120	-	-	-	S	-	-	-	ECF-type riboflavin transporter, S component
CLEDNEIB_00878	9.09e-193	pdxK	2.7.1.35	-	H	ko:K00868	ko00750,ko01100,map00750,map01100	ko00000,ko00001,ko01000	Phosphomethylpyrimidine kinase
CLEDNEIB_00879	3.74e-265	-	-	-	V	-	-	-	Beta-lactamase
CLEDNEIB_00880	1.46e-145	maa3	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	transferase hexapeptide repeat
CLEDNEIB_00881	6.65e-145	-	-	-	I	-	-	-	Acid phosphatase homologues
CLEDNEIB_00882	1.53e-102	-	-	-	C	-	-	-	Flavodoxin
CLEDNEIB_00883	0.0	recQ	3.6.4.12	-	L	ko:K03654	ko03018,map03018	ko00000,ko00001,ko01000,ko03400	ATP-dependent DNA helicase RecQ
CLEDNEIB_00884	4.64e-98	ktrB	-	-	P	ko:K03498	-	ko00000,ko02000	Potassium uptake protein
CLEDNEIB_00885	1.27e-313	ynbB	-	-	P	-	-	-	aluminum resistance
CLEDNEIB_00886	0.0	speA	4.1.1.17, 4.1.1.18, 4.1.1.19	-	E	ko:K01581,ko:K01582,ko:K01585	ko00310,ko00330,ko00480,ko00960,ko01100,ko01110,ko01130,map00310,map00330,map00480,map00960,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Orn/Lys/Arg decarboxylase, C-terminal domain
CLEDNEIB_00887	6.32e-35	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
CLEDNEIB_00888	7.82e-48	frnE	5.3.4.1	-	Q	ko:K01829	-	ko00000,ko01000	DSBA-like thioredoxin domain
CLEDNEIB_00889	1.2e-48	frnE	5.3.4.1	-	Q	ko:K01829	-	ko00000,ko01000	DSBA-like thioredoxin domain
CLEDNEIB_00890	7.66e-222	trxB	1.8.1.9	-	C	ko:K00384	ko00450,map00450	ko00000,ko00001,ko01000	Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
CLEDNEIB_00891	2.51e-152	-	-	-	K	-	-	-	Rhodanese Homology Domain
CLEDNEIB_00892	2.66e-48	-	-	-	CO	ko:K03671	ko04621,ko05418,map04621,map05418	ko00000,ko00001,ko03110	Thioredoxin
CLEDNEIB_00893	1.92e-28	-	-	-	-	-	-	-	-
CLEDNEIB_00894	8.77e-42	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
CLEDNEIB_00895	4.81e-21	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
CLEDNEIB_00896	8.59e-85	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
CLEDNEIB_00897	2.49e-87	prtB	3.4.21.96	-	O	ko:K01361	-	ko00000,ko01000,ko01002,ko03110	Belongs to the peptidase S8 family
CLEDNEIB_00898	2.12e-110	prtB	3.4.21.96	-	O	ko:K01361	-	ko00000,ko01000,ko01002,ko03110	Belongs to the peptidase S8 family
CLEDNEIB_00899	3.39e-269	prtB	3.4.21.96	-	O	ko:K01361	-	ko00000,ko01000,ko01002,ko03110	Belongs to the peptidase S8 family
CLEDNEIB_00900	8.9e-66	-	-	-	-	-	-	-	-
CLEDNEIB_00901	3.47e-73	dhaM	2.7.1.121	-	S	ko:K05881	ko00561,map00561	ko00000,ko00001,ko01000,ko02000	PTS system fructose IIA component
CLEDNEIB_00902	1.89e-118	dhaL	2.7.1.121	-	S	ko:K05879	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Dak2
CLEDNEIB_00903	4.49e-233	dhaK	2.7.1.121	-	G	ko:K05878	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Dak1 domain
CLEDNEIB_00904	0.0	ytgP	-	-	S	ko:K03328	-	ko00000	Polysaccharide biosynthesis protein
CLEDNEIB_00905	0.0	leuS	6.1.1.4	-	J	ko:K01869	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Belongs to the class-I aminoacyl-tRNA synthetase family
CLEDNEIB_00906	1.8e-153	yodM	3.6.1.27	-	I	ko:K19302	ko00550,map00550	ko00000,ko00001,ko01000,ko01011	Acid phosphatase homologues
CLEDNEIB_00907	3.25e-190	hepT	2.5.1.30	-	H	ko:K00805	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	Belongs to the FPP GGPP synthase family
CLEDNEIB_00908	0.0	mdr	-	-	EGP	-	-	-	Major Facilitator
CLEDNEIB_00909	4.32e-279	metK	2.5.1.6	-	H	ko:K00789	ko00270,ko01100,ko01110,ko01230,map00270,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
CLEDNEIB_00912	2.76e-214	-	-	-	P	ko:K02077	-	ko00000,ko00002,ko02000	Belongs to the bacterial solute-binding protein 9 family
CLEDNEIB_00915	0.0	cadA	-	-	P	-	-	-	P-type ATPase
CLEDNEIB_00916	1.83e-259	napA	-	-	P	-	-	-	Sodium/hydrogen exchanger family
CLEDNEIB_00917	9e-66	-	-	-	D	ko:K19159	-	ko00000,ko02048	Antitoxin component of a toxin-antitoxin (TA) module
CLEDNEIB_00918	5.58e-63	yoeB	-	-	S	ko:K19158	-	ko00000,ko01000,ko02048	YoeB-like toxin of bacterial type II toxin-antitoxin system
CLEDNEIB_00919	0.0	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC transporter transmembrane region
CLEDNEIB_00920	4.45e-106	-	-	-	S	-	-	-	Putative adhesin
CLEDNEIB_00921	9.15e-200	mutR	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
CLEDNEIB_00922	1.77e-61	-	-	-	-	-	-	-	-
CLEDNEIB_00923	1.45e-152	-	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
CLEDNEIB_00924	7.3e-248	-	-	-	S	-	-	-	DUF218 domain
CLEDNEIB_00925	0.0	-	-	-	V	ko:K02003,ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
CLEDNEIB_00926	3.13e-125	-	-	-	S	-	-	-	ECF transporter, substrate-specific component
CLEDNEIB_00927	2.08e-204	-	-	-	S	-	-	-	Aldo/keto reductase family
CLEDNEIB_00928	3.84e-172	nagB	3.5.99.6	-	G	ko:K02564	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
CLEDNEIB_00929	2.18e-128	-	-	-	K	-	-	-	rpiR family
CLEDNEIB_00930	8.5e-183	-	-	-	S	ko:K09963	-	ko00000	Bacterial protein of unknown function (DUF871)
CLEDNEIB_00931	3.62e-233	ybbE	3.4.16.4	-	V	ko:K21469	ko00550,map00550	ko00000,ko00001,ko01000,ko01002,ko01011	Beta-lactamase
CLEDNEIB_00932	8.85e-159	murQ	4.2.1.126	-	G	ko:K07106	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
CLEDNEIB_00933	0.0	pts32BC	2.7.1.211	-	G	ko:K02808,ko:K02809,ko:K02810	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
CLEDNEIB_00935	1.57e-150	dak	2.7.1.76	-	F	ko:K10353	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000	deoxynucleoside kinase
CLEDNEIB_00936	6.91e-165	dgk2	2.7.1.76	-	F	ko:K10353	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000	deoxynucleoside kinase
CLEDNEIB_00937	0.0	cysS	6.1.1.16	-	J	ko:K01883	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-I aminoacyl-tRNA synthetase family
CLEDNEIB_00938	2.1e-99	mrnC	-	-	J	ko:K11145	-	ko00000,ko01000,ko03009	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
CLEDNEIB_00939	1.76e-178	trmH	2.1.1.185	-	J	ko:K03218	-	ko00000,ko01000,ko03009	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CLEDNEIB_00940	2.12e-120	comX	-	-	K	ko:K03088,ko:K03091,ko:K12296	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko03000,ko03021	Belongs to the sigma-70 factor family
CLEDNEIB_00941	1.4e-44	-	-	-	-	-	-	-	-
CLEDNEIB_00942	0.0	gntK	2.7.1.12	-	G	ko:K00851	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko01000	Belongs to the FGGY kinase family
CLEDNEIB_00943	0.0	dxs	2.2.1.7	-	H	ko:K01662	ko00730,ko00900,ko01100,ko01110,ko01130,map00730,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
CLEDNEIB_00944	1.21e-33	secE	-	-	U	ko:K03073	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
CLEDNEIB_00945	8.63e-131	nusG	-	-	K	ko:K02601	-	ko00000,ko03009,ko03021	Participates in transcription elongation, termination and antitermination
CLEDNEIB_00946	3.82e-90	rplK	-	-	J	ko:K02867	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
CLEDNEIB_00947	3.02e-160	rplA	-	-	J	ko:K02863	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
CLEDNEIB_00948	4.5e-200	pstS	-	-	P	ko:K02040	ko02010,ko02020,ko05152,map02010,map02020,map05152	ko00000,ko00001,ko00002,ko02000	Phosphate
CLEDNEIB_00949	4.05e-220	pstC	-	-	P	ko:K02037	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	probably responsible for the translocation of the substrate across the membrane
CLEDNEIB_00950	9.02e-199	pstA	-	-	P	ko:K02038	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Phosphate transport system permease protein PstA
CLEDNEIB_00951	2.49e-185	pstB2	3.6.3.27	-	P	ko:K02036	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
CLEDNEIB_00952	2.31e-179	pstB1	3.6.3.27	-	P	ko:K02036	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
CLEDNEIB_00953	1.43e-151	phoU	-	-	P	ko:K02039	-	ko00000	Plays a role in the regulation of phosphate uptake
CLEDNEIB_00954	3.34e-13	ywkB	-	-	S	ko:K07088	-	ko00000	Membrane transport protein
CLEDNEIB_00955	7.85e-197	ywkB	-	-	S	ko:K07088	-	ko00000	Membrane transport protein
CLEDNEIB_00956	1.77e-109	rplJ	-	-	J	ko:K02864	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
CLEDNEIB_00957	2.67e-71	rplL	-	-	J	ko:K02935	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
CLEDNEIB_00958	4.19e-44	-	2.1.1.172	-	J	ko:K00564,ko:K10716	-	ko00000,ko01000,ko02000,ko03009	Ion channel
CLEDNEIB_00959	2.28e-116	-	2.1.1.172	-	J	ko:K00564,ko:K10716	-	ko00000,ko01000,ko02000,ko03009	Ion channel
CLEDNEIB_00960	4.71e-149	rsmC	2.1.1.172	-	J	ko:K00564	-	ko00000,ko01000,ko03009	Methyltransferase
CLEDNEIB_00961	9.21e-120	tadA	3.5.4.33	-	F	ko:K11991	-	ko00000,ko01000,ko03016	Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
CLEDNEIB_00962	0.0	dnaX	2.7.7.7	-	L	ko:K02343	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
CLEDNEIB_00963	6.03e-57	yaaK	-	-	S	ko:K09747	-	ko00000	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
CLEDNEIB_00964	5.33e-141	recR	-	-	L	ko:K06187	ko03440,map03440	ko00000,ko00001,ko03400	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
CLEDNEIB_00965	5.61e-45	-	-	-	S	-	-	-	Protein of unknown function (DUF2508)
CLEDNEIB_00966	2.41e-148	tmk	2.7.4.9	-	F	ko:K00943	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
CLEDNEIB_00967	3.6e-67	yaaQ	-	-	S	-	-	-	Cyclic-di-AMP receptor
CLEDNEIB_00968	2.41e-198	holB	2.7.7.7	-	L	ko:K02341	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III
CLEDNEIB_00969	1.35e-78	yabA	-	-	L	-	-	-	Involved in initiation control of chromosome replication
CLEDNEIB_00970	2.23e-198	rsmI	2.1.1.198	-	H	ko:K07056	-	ko00000,ko01000,ko03009	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
CLEDNEIB_00971	3.43e-182	fat	3.1.2.21	-	I	ko:K01071	ko00061,ko01100,map00061,map01100	ko00000,ko00001,ko01000,ko01004	Acyl-ACP thioesterase
CLEDNEIB_00972	9.09e-113	-	-	-	S	-	-	-	ECF transporter, substrate-specific component
CLEDNEIB_00973	2.22e-168	yeaZ	2.3.1.234	-	O	ko:K01409,ko:K14742	-	ko00000,ko01000,ko03016	Universal bacterial protein YeaZ
CLEDNEIB_00974	1.6e-131	rimI	2.3.1.128	-	K	ko:K03789	-	ko00000,ko01000,ko03009	Ribosomal-protein-alanine acetyltransferase
CLEDNEIB_00975	5.09e-248	tsaD	2.3.1.234	-	J	ko:K01409	-	ko00000,ko01000,ko03016	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
CLEDNEIB_00976	4.97e-160	deoC	4.1.2.4	-	F	ko:K01619	ko00030,map00030	ko00000,ko00001,ko01000	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
CLEDNEIB_00977	3.42e-233	-	-	-	S	-	-	-	Oxidoreductase family, NAD-binding Rossmann fold
CLEDNEIB_00978	9.39e-167	frlR1	-	-	K	ko:K03710,ko:K10711	-	ko00000,ko03000	UTRA
CLEDNEIB_00979	3.87e-12	-	-	-	S	-	-	-	Toxin ToxN, type III toxin-antitoxin system
CLEDNEIB_00980	1.35e-140	bbsF_1	2.8.3.19	-	C	ko:K18702	-	ko00000,ko01000	Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
CLEDNEIB_00981	1.97e-136	bbsF_1	2.8.3.19	-	C	ko:K18702	-	ko00000,ko01000	Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
CLEDNEIB_00982	9.31e-142	frc	2.8.3.16	-	C	ko:K07749	-	ko00000,ko01000	Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
CLEDNEIB_00983	3.89e-46	spxB	1.2.3.3, 1.2.5.1, 2.2.1.6, 4.1.1.8	-	EH	ko:K00156,ko:K00158,ko:K01577,ko:K01652	ko00290,ko00620,ko00630,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00620,map00630,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the TPP enzyme family
CLEDNEIB_00984	5.37e-274	spxB	1.2.3.3, 1.2.5.1, 2.2.1.6, 4.1.1.8	-	EH	ko:K00156,ko:K00158,ko:K01577,ko:K01652	ko00290,ko00620,ko00630,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00620,map00630,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the TPP enzyme family
CLEDNEIB_00985	2.43e-17	spxB	1.2.3.3, 1.2.5.1, 2.2.1.6, 4.1.1.8	-	EH	ko:K00156,ko:K00158,ko:K01577,ko:K01652	ko00290,ko00620,ko00630,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00620,map00630,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the TPP enzyme family
CLEDNEIB_00986	0.0	ydiF	-	-	S	ko:K06158	-	ko00000,ko03012	ABC transporter, ATP-binding protein
CLEDNEIB_00987	3.4e-150	rex	-	-	K	ko:K01926	-	ko00000,ko03000	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
CLEDNEIB_00988	4.34e-101	-	-	-	K	-	-	-	LytTr DNA-binding domain
CLEDNEIB_00989	1.26e-161	-	-	-	S	-	-	-	membrane
CLEDNEIB_00990	1.39e-230	scrR	-	-	K	ko:K02529,ko:K03484	-	ko00000,ko03000	Transcriptional regulator, LacI family
CLEDNEIB_00991	2.3e-290	scrB	3.2.1.26	GH32	G	ko:K01193	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	invertase
CLEDNEIB_00992	0.0	scrA	2.7.1.211	-	G	ko:K02808,ko:K02809,ko:K02810	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
CLEDNEIB_00993	7.04e-63	-	-	-	-	-	-	-	-
CLEDNEIB_00994	9.71e-116	-	-	-	-	-	-	-	-
CLEDNEIB_00995	9.06e-60	groS	-	-	O	ko:K04078	-	ko00000,ko03029,ko03110	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
CLEDNEIB_00996	0.0	groL	-	-	O	ko:K04077	ko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
CLEDNEIB_00997	0.0	mutS	-	-	L	ko:K03555	ko03430,map03430	ko00000,ko00001,ko03400	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
CLEDNEIB_00998	0.0	mutL	-	-	L	ko:K03572	ko03430,map03430	ko00000,ko00001,ko03400	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
CLEDNEIB_00999	1.47e-132	ruvA	3.6.4.12	-	L	ko:K03550	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
CLEDNEIB_01000	4.87e-236	ruvB	3.6.4.12	-	L	ko:K03551	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
CLEDNEIB_01001	3.11e-80	yajC	-	-	U	ko:K03210	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Preprotein translocase
CLEDNEIB_01002	0.0	zwf	1.1.1.363, 1.1.1.49	-	G	ko:K00036	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,ko05230,map00030,map00480,map01100,map01110,map01120,map01130,map01200,map05230	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
CLEDNEIB_01003	9.26e-270	dinB	2.7.7.7	-	L	ko:K02346	-	ko00000,ko01000,ko03400	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
CLEDNEIB_01004	1.56e-231	nrnA	3.1.13.3, 3.1.3.7	-	S	ko:K06881	ko00920,ko01100,ko01120,map00920,map01100,map01120	ko00000,ko00001,ko01000,ko03400	DHHA1 domain protein
CLEDNEIB_01005	5.24e-312	cshB	3.6.4.13	-	JKL	ko:K05592,ko:K18692	ko03018,map03018	ko00000,ko00001,ko01000,ko03009,ko03019	DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
CLEDNEIB_01006	4.66e-83	-	-	-	-	-	-	-	-
CLEDNEIB_01007	2.67e-111	-	-	-	-	-	-	-	-
CLEDNEIB_01008	0.0	alaS	6.1.1.7	-	J	ko:K01872	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
CLEDNEIB_01009	5.32e-57	yrzL	-	-	S	-	-	-	Belongs to the UPF0297 family
CLEDNEIB_01010	2.69e-95	yrrK	-	-	J	ko:K07447	-	ko00000,ko01000	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
CLEDNEIB_01011	4.8e-66	yrzB	-	-	S	-	-	-	Belongs to the UPF0473 family
CLEDNEIB_01012	0.0	mutS2	-	-	L	ko:K07456	ko03430,map03430	ko00000,ko00001,ko03400	Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
CLEDNEIB_01013	5.37e-72	trxA	-	-	O	ko:K03671	ko04621,ko05418,map04621,map05418	ko00000,ko00001,ko03110	Belongs to the thioredoxin family
CLEDNEIB_01014	3.3e-64	mscL	-	-	M	ko:K03282	-	ko00000,ko02000	Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
CLEDNEIB_01015	3.63e-91	yslB	-	-	S	-	-	-	Protein of unknown function (DUF2507)
CLEDNEIB_01016	1.19e-189	murI	3.6.1.66, 5.1.1.3	-	M	ko:K01776,ko:K02428	ko00230,ko00471,ko01100,map00230,map00471,map01100	ko00000,ko00001,ko01000,ko01011	Provides the (R)-glutamate required for cell wall biosynthesis
CLEDNEIB_01017	2.16e-148	rdgB	3.6.1.66	-	F	ko:K02428	ko00230,map00230	ko00000,ko00001,ko01000	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
CLEDNEIB_01018	1.05e-191	ykuT	-	-	M	ko:K16052,ko:K22044	-	ko00000,ko02000	mechanosensitive ion channel
CLEDNEIB_01019	3.11e-28	ytxG	-	-	S	-	-	-	protein containing a divergent version of the methyl-accepting chemotaxis-like domain
CLEDNEIB_01020	3.09e-69	-	-	-	-	-	-	-	-
CLEDNEIB_01021	2.37e-274	pepQ	3.4.13.9	-	E	ko:K01271	-	ko00000,ko01000,ko01002	Creatinase/Prolidase N-terminal domain
CLEDNEIB_01022	6.84e-229	ccpA	-	-	K	ko:K02529	-	ko00000,ko03000	catabolite control protein A
CLEDNEIB_01023	0.0	-	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	glycerophosphoryl diester phosphodiesterase
CLEDNEIB_01024	2.42e-74	-	-	-	-	-	-	-	-
CLEDNEIB_01025	0.0	sasH	3.1.3.5, 3.1.3.6, 3.1.4.16, 3.6.1.45	-	F	ko:K01081,ko:K01119,ko:K07004,ko:K08693,ko:K11751	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the 5'-nucleotidase family
CLEDNEIB_01026	3.11e-128	yutD	-	-	S	-	-	-	Protein of unknown function (DUF1027)
CLEDNEIB_01027	1.24e-187	nagD	3.1.3.41	-	G	ko:K01101	ko00627,ko01120,map00627,map01120	ko00000,ko00001,ko01000	Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
CLEDNEIB_01028	5.73e-117	-	-	-	S	-	-	-	Protein of unknown function (DUF1461)
CLEDNEIB_01029	4.16e-151	dedA	-	-	S	ko:K03975	-	ko00000	SNARE-like domain protein
CLEDNEIB_01030	4.35e-192	yumC	1.18.1.2, 1.19.1.1	-	C	ko:K21567	-	ko00000,ko01000	Ferredoxin--NADP reductase
CLEDNEIB_01031	6.91e-203	-	-	-	-	-	-	-	-
CLEDNEIB_01032	9.18e-211	-	-	-	-	-	-	-	-
CLEDNEIB_01033	8.93e-173	-	-	-	-	-	-	-	-
CLEDNEIB_01034	0.0	glnA	6.3.1.2	-	E	ko:K01915	ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727	ko00000,ko00001,ko01000,ko04147	glutamine synthetase
CLEDNEIB_01035	5.31e-215	ynbB	-	-	P	-	-	-	aluminum resistance
CLEDNEIB_01036	2.78e-37	ynbB	-	-	P	-	-	-	aluminum resistance
CLEDNEIB_01037	9.65e-220	miaA	2.5.1.75	-	F	ko:K00791	ko00908,ko01100,ko01110,map00908,map01100,map01110	ko00000,ko00001,ko01000,ko01006,ko03016	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
CLEDNEIB_01038	3.1e-92	yqhL	-	-	P	-	-	-	Rhodanese-like protein
CLEDNEIB_01039	2.45e-44	yqgQ	-	-	S	-	-	-	Bacterial protein of unknown function (DUF910)
CLEDNEIB_01040	4.44e-151	gluP	3.4.21.105	-	S	ko:K19225	-	ko00000,ko01000,ko01002	Rhomboid family
CLEDNEIB_01041	3.12e-129	fthC	6.3.3.2	-	H	ko:K01934	ko00670,ko01100,map00670,map01100	ko00000,ko00001,ko01000	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
CLEDNEIB_01042	6.25e-29	rpmG	-	-	J	ko:K02913	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL33 family
CLEDNEIB_01043	0.0	pbp2b	-	-	M	ko:K00687,ko:K12553,ko:K21465,ko:K21466	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01011	Penicillin-binding Protein
CLEDNEIB_01044	0.0	-	-	-	S	-	-	-	membrane
CLEDNEIB_01045	5.79e-217	-	-	-	G	-	-	-	BadF/BadG/BcrA/BcrD ATPase family
CLEDNEIB_01046	1.67e-51	-	-	-	K	-	-	-	Helix-turn-helix domain
CLEDNEIB_01047	5.22e-36	-	-	-	S	-	-	-	Phage derived protein Gp49-like (DUF891)
CLEDNEIB_01048	1.79e-214	ldh3	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	lactate/malate dehydrogenase, alpha/beta C-terminal domain
CLEDNEIB_01049	2.25e-88	greA	-	-	K	ko:K03624	-	ko00000,ko03021	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
CLEDNEIB_01050	0.0	pheT	6.1.1.20	-	J	ko:K01890	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
CLEDNEIB_01051	9.05e-258	pheS	6.1.1.20	-	J	ko:K01889	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
CLEDNEIB_01052	1.15e-79	yodB	-	-	K	-	-	-	Transcriptional regulator, HxlR family
CLEDNEIB_01053	1.28e-178	spoU	-	-	J	ko:K03437	-	ko00000,ko03016	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CLEDNEIB_01054	3.93e-59	acyP	3.6.1.7	-	C	ko:K01512	ko00620,ko00627,ko01120,map00620,map00627,map01120	ko00000,ko00001,ko01000	Belongs to the acylphosphatase family
CLEDNEIB_01055	7.05e-204	yidC	-	-	U	ko:K03217	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044,ko03029	Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
CLEDNEIB_01056	5.59e-109	-	-	-	S	ko:K19055	-	ko00000,ko01000,ko03016	Aminoacyl-tRNA editing domain
CLEDNEIB_01058	4.02e-139	-	3.6.3.44	-	V	ko:K02021,ko:K06147,ko:K18104	ko01501,ko02010,map01501,map02010	ko00000,ko00001,ko00002,ko01000,ko01504,ko02000	ABC transporter transmembrane region
CLEDNEIB_01060	2.71e-98	-	-	-	-	-	-	-	-
CLEDNEIB_01061	5.72e-137	-	-	-	K	-	-	-	LysR substrate binding domain
CLEDNEIB_01062	5.55e-27	-	-	-	-	-	-	-	-
CLEDNEIB_01063	3.04e-278	-	-	-	S	-	-	-	Sterol carrier protein domain
CLEDNEIB_01064	7.45e-124	citX	2.7.7.61	-	HI	ko:K05964	ko02020,map02020	ko00000,ko00001,ko01000	Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase
CLEDNEIB_01065	1.33e-66	arcC	2.7.2.2	-	E	ko:K00926	ko00220,ko00230,ko00910,ko01100,ko01120,ko01200,map00220,map00230,map00910,map01100,map01120,map01200	ko00000,ko00001,ko01000	Belongs to the carbamate kinase family
CLEDNEIB_01066	1.23e-87	arcC	2.7.2.2	-	E	ko:K00926	ko00220,ko00230,ko00910,ko01100,ko01120,ko01200,map00220,map00230,map00910,map01100,map01120,map01200	ko00000,ko00001,ko01000	Belongs to the carbamate kinase family
CLEDNEIB_01067	5.91e-184	argF	2.1.3.3	-	E	ko:K00611	ko00220,ko01100,ko01110,ko01130,ko01230,map00220,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
CLEDNEIB_01068	7.7e-17	argF	2.1.3.3	-	E	ko:K00611	ko00220,ko01100,ko01110,ko01130,ko01230,map00220,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
CLEDNEIB_01069	6.12e-114	arcA	3.5.3.6	-	E	ko:K01478	ko00220,ko01100,ko01110,ko01130,map00220,map01100,map01110,map01130	ko00000,ko00001,ko01000	Arginine
CLEDNEIB_01070	6.65e-19	arcA	3.5.3.6	-	E	ko:K01478	ko00220,ko01100,ko01110,ko01130,map00220,map01100,map01110,map01130	ko00000,ko00001,ko01000	Arginine
CLEDNEIB_01071	5.18e-28	arcA	3.5.3.6	-	E	ko:K01478	ko00220,ko01100,ko01110,ko01130,map00220,map01100,map01110,map01130	ko00000,ko00001,ko01000	Arginine
CLEDNEIB_01072	1.71e-202	lysR5	-	-	K	-	-	-	LysR substrate binding domain
CLEDNEIB_01073	0.0	-	-	-	P	-	-	-	Cation transporter/ATPase, N-terminus
CLEDNEIB_01074	3.75e-109	-	3.4.21.96	-	S	ko:K01361	-	ko00000,ko01000,ko01002,ko03110	SLAP domain
CLEDNEIB_01075	0.0	cls	-	-	I	ko:K06131	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CLEDNEIB_01076	1.07e-195	metA	2.3.1.46	-	E	ko:K00651	ko00270,ko00920,ko01100,ko01110,ko01230,map00270,map00920,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Transfers an acetyl group from acetyl-CoA to
CLEDNEIB_01077	4.56e-215	cysK	2.5.1.47	-	E	ko:K01738	ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the cysteine synthase cystathionine beta- synthase family
CLEDNEIB_01078	1.99e-122	apt	2.4.2.7	-	F	ko:K00759	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000,ko04147	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
CLEDNEIB_01079	0.0	recJ	-	-	L	ko:K07462	ko03410,ko03430,ko03440,map03410,map03430,map03440	ko00000,ko00001,ko01000,ko03400	Single-stranded-DNA-specific exonuclease RecJ
CLEDNEIB_01080	6.79e-152	srtA	3.4.22.70	-	M	ko:K07284	-	ko00000,ko01000,ko01002,ko01011	sortase family
CLEDNEIB_01081	0.0	lepA	-	-	M	ko:K03596	ko05134,map05134	ko00000,ko00001	Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
CLEDNEIB_01082	1.29e-21	-	-	-	-	-	-	-	-
CLEDNEIB_01083	0.0	arlS	2.7.13.3	-	T	ko:K18940	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
CLEDNEIB_01084	2.12e-164	csrR	-	-	K	-	-	-	response regulator
CLEDNEIB_01085	2.47e-125	ylbN	-	-	S	ko:K07040	-	ko00000	Uncharacterized ACR, COG1399
CLEDNEIB_01086	1.09e-273	ylbM	-	-	S	-	-	-	Belongs to the UPF0348 family
CLEDNEIB_01087	3.58e-78	rsfS	-	-	J	ko:K09710	-	ko00000,ko03009	Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
CLEDNEIB_01088	1.12e-141	yqeK	-	-	H	-	-	-	Hydrolase, HD family
CLEDNEIB_01089	4.51e-156	nadD	2.7.7.18	-	H	ko:K00969	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
CLEDNEIB_01090	3.91e-269	yqeH	-	-	S	ko:K06948	-	ko00000,ko03009	Ribosome biogenesis GTPase YqeH
CLEDNEIB_01091	1.51e-121	yqeG	-	-	S	ko:K07015	-	ko00000	HAD phosphatase, family IIIA
CLEDNEIB_01092	1.23e-75	rplT	-	-	J	ko:K02887	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
CLEDNEIB_01093	2.77e-37	rpmI	-	-	J	ko:K02916	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL35 family
CLEDNEIB_01094	4.65e-71	infC	-	-	J	ko:K02520	-	ko00000,ko03012,ko03029	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
CLEDNEIB_01095	2.51e-43	astA	2.8.2.22	-	M	ko:K01023	-	ko00000,ko01000	Arylsulfotransferase Ig-like domain
CLEDNEIB_01096	1.28e-194	astA	2.8.2.22	-	M	ko:K01023	-	ko00000,ko01000	Arylsulfotransferase Ig-like domain
CLEDNEIB_01097	2.61e-36	astA	2.8.2.22	-	M	ko:K01023	-	ko00000,ko01000	Arylsulfotransferase Ig-like domain
CLEDNEIB_01098	3.9e-247	-	-	-	S	-	-	-	Domain of unknown function (DUF389)
CLEDNEIB_01099	1.51e-122	-	-	-	-	-	-	-	-
CLEDNEIB_01100	4.51e-118	-	-	-	-	-	-	-	-
CLEDNEIB_01101	0.0	thrS	6.1.1.3	-	J	ko:K01868	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
CLEDNEIB_01102	1.03e-212	dnaI	-	-	L	ko:K11144	-	ko00000,ko03032	Primosomal protein DnaI
CLEDNEIB_01103	1.76e-314	dnaB2	-	-	L	ko:K03346	-	ko00000,ko03032	Replication initiation and membrane attachment
CLEDNEIB_01104	5.46e-108	nrdR	-	-	K	ko:K07738	-	ko00000,ko03000	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
CLEDNEIB_01105	1.03e-134	coaE	2.7.1.24	-	F	ko:K00859	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
CLEDNEIB_01106	3.73e-202	fpg	3.2.2.23, 4.2.99.18	-	L	ko:K10563	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
CLEDNEIB_01107	0.0	polA	2.7.7.7	-	L	ko:K02335	ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440	ko00000,ko00001,ko01000,ko03032,ko03400	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
CLEDNEIB_01108	0.0	mycA	4.2.1.53	-	S	ko:K10254	-	ko00000,ko01000	Myosin-crossreactive antigen
CLEDNEIB_01109	4.97e-218	rluD2	5.4.99.23	-	J	ko:K06180	-	ko00000,ko01000,ko03009	Responsible for synthesis of pseudouridine from uracil
CLEDNEIB_01110	4.35e-198	nadK	2.7.1.23	-	F	ko:K00858	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
CLEDNEIB_01111	1.15e-145	yjbM	2.7.6.5	-	S	ko:K07816	ko00230,map00230	ko00000,ko00001,ko01000	RelA SpoT domain protein
CLEDNEIB_01112	8.48e-145	-	-	-	S	-	-	-	CYTH
CLEDNEIB_01113	5.3e-144	yjbH	-	-	Q	-	-	-	Thioredoxin
CLEDNEIB_01114	1.53e-203	coiA	-	-	S	ko:K06198	-	ko00000	Competence protein
CLEDNEIB_01115	3.26e-172	mecA	-	-	NOT	ko:K16511	-	ko00000	Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
CLEDNEIB_01116	1.08e-87	spxA	-	-	K	ko:K16509	-	ko00000	Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
CLEDNEIB_01117	0.0	ptsI	2.7.3.9	-	G	ko:K08483	ko02060,map02060	ko00000,ko00001,ko01000,ko02000	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
CLEDNEIB_01118	1.29e-54	ptsH	-	-	G	ko:K11189	-	ko00000,ko02000	phosphocarrier protein HPR
CLEDNEIB_01119	5.25e-37	-	-	-	-	-	-	-	-
CLEDNEIB_01120	0.0	clpE	-	-	O	ko:K03697	-	ko00000,ko03110	Belongs to the ClpA ClpB family
CLEDNEIB_01121	4.17e-60	XK27_09445	-	-	S	-	-	-	Domain of unknown function (DUF1827)
CLEDNEIB_01122	0.0	prfC	-	-	J	ko:K02837	-	ko00000,ko03012	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
CLEDNEIB_01123	1.2e-205	hlyX	-	-	S	ko:K03699	-	ko00000,ko02042	Transporter associated domain
CLEDNEIB_01124	2.6e-96	-	-	-	-	-	-	-	-
CLEDNEIB_01125	1.05e-112	-	-	-	-	-	-	-	-
CLEDNEIB_01126	2.89e-185	recX	-	-	S	ko:K03565	-	ko00000,ko03400	Regulatory protein RecX
CLEDNEIB_01127	0.0	rumA_1	2.1.1.190, 2.1.1.35	-	J	ko:K00557,ko:K03215	-	ko00000,ko01000,ko03009,ko03016	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
CLEDNEIB_01128	2.06e-127	ybcH	-	-	D	ko:K06889	-	ko00000	Alpha beta
CLEDNEIB_01132	3.7e-58	-	-	-	K	-	-	-	helix_turn_helix, arabinose operon control protein
CLEDNEIB_01133	1.05e-123	-	-	-	K	-	-	-	helix_turn_helix, arabinose operon control protein
CLEDNEIB_01134	1.64e-163	sacA	3.2.1.26	GH32	G	ko:K01193	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	invertase
CLEDNEIB_01135	9.72e-270	scrA5	2.7.1.211	-	G	ko:K02808,ko:K02809,ko:K02810	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
CLEDNEIB_01136	3.02e-17	scrA5	2.7.1.211	-	G	ko:K02808,ko:K02809,ko:K02810	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
CLEDNEIB_01137	2.35e-119	melA	3.2.1.22	-	G	ko:K07407	ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603	ko00000,ko00001,ko01000	alpha-galactosidase
CLEDNEIB_01138	9.85e-78	melA	3.2.1.22	-	G	ko:K07407	ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603	ko00000,ko00001,ko01000	alpha-galactosidase
CLEDNEIB_01139	3.06e-238	manL	2.7.1.191	-	G	ko:K02793,ko:K02794	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system sorbose subfamily IIB component
CLEDNEIB_01140	5.16e-181	manY	-	-	G	ko:K02746,ko:K02795	ko00051,ko00052,ko00520,ko01100,ko02060,map00051,map00052,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	PTS system
CLEDNEIB_01141	3.51e-222	manN	-	-	G	ko:K02796	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	system, mannose fructose sorbose family IID component
CLEDNEIB_01142	1.12e-82	-	-	-	S	-	-	-	Domain of unknown function (DUF956)
CLEDNEIB_01143	2.22e-133	-	-	-	K	-	-	-	Transcriptional regulator
CLEDNEIB_01144	4.77e-29	-	-	-	K	-	-	-	Transcriptional regulator
CLEDNEIB_01145	3.09e-107	-	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	transferase hexapeptide repeat
CLEDNEIB_01146	8.91e-306	cycA	-	-	E	ko:K03293,ko:K11737	-	ko00000,ko02000	Amino acid permease
CLEDNEIB_01147	0.0	adhE	1.1.1.1, 1.2.1.10	-	C	ko:K04072	ko00010,ko00071,ko00350,ko00620,ko00625,ko00626,ko00650,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00620,map00625,map00626,map00650,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	belongs to the iron- containing alcohol dehydrogenase family
CLEDNEIB_01148	0.0	glmS	2.6.1.16	-	M	ko:K00820	ko00250,ko00520,ko01100,ko01130,ko04931,map00250,map00520,map01100,map01130,map04931	ko00000,ko00001,ko01000,ko01002	Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
CLEDNEIB_01149	7.04e-63	-	-	-	-	-	-	-	-
CLEDNEIB_01150	4.01e-134	-	-	-	E	-	-	-	amino acid
CLEDNEIB_01151	1.57e-94	-	-	-	-	-	-	-	-
CLEDNEIB_01152	1.68e-117	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
CLEDNEIB_01153	3.7e-105	-	-	-	S	-	-	-	LPXTG cell wall anchor motif
CLEDNEIB_01154	6.43e-283	ackA	2.7.2.1	-	F	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
CLEDNEIB_01155	1.81e-169	-	4.1.1.44	-	S	ko:K01607	ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220	ko00000,ko00001,ko01000	Carboxymuconolactone decarboxylase family
CLEDNEIB_01156	1.85e-48	-	-	-	-	-	-	-	-
CLEDNEIB_01157	7.87e-93	apfA	3.6.1.61	-	F	ko:K18445	ko00230,map00230	ko00000,ko00001,ko01000	Nudix hydrolase
CLEDNEIB_01158	4.1e-67	XK27_04775	-	-	S	ko:K09155	-	ko00000	PAS domain
CLEDNEIB_01159	1.16e-241	yhaM	-	-	S	ko:K03698	-	ko00000,ko01000,ko03019	Metal dependent phosphohydrolases with conserved 'HD' motif.
CLEDNEIB_01160	0.0	yhaN	-	-	L	-	-	-	AAA domain
CLEDNEIB_01161	2.37e-291	yhaO	-	-	L	ko:K03547	-	ko00000,ko03400	Ser Thr phosphatase family protein
CLEDNEIB_01162	8.43e-73	yheA	-	-	S	-	-	-	Belongs to the UPF0342 family
CLEDNEIB_01163	0.0	pbp2A	2.4.1.129, 3.4.16.4	GT51	M	ko:K12555	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01003,ko01011	penicillin-binding protein
CLEDNEIB_01164	4.21e-208	rluA	5.4.99.23, 5.4.99.28, 5.4.99.29	-	J	ko:K06177,ko:K06180	-	ko00000,ko01000,ko03009,ko03016	Responsible for synthesis of pseudouridine from uracil
CLEDNEIB_01165	3.87e-12	-	-	-	C	-	-	-	FMN-dependent dehydrogenase
CLEDNEIB_01166	2.38e-173	mgtC3	-	-	S	ko:K07507	-	ko00000,ko02000	MgtC family
CLEDNEIB_01167	6.12e-179	glpF	-	-	U	ko:K02440	-	ko00000,ko02000	Belongs to the MIP aquaporin (TC 1.A.8) family
CLEDNEIB_01168	5.88e-72	-	-	-	-	-	-	-	-
CLEDNEIB_01169	1.29e-191	citG	2.4.2.52	-	H	ko:K05966	ko02020,map02020	ko00000,ko00001,ko01000	2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase
CLEDNEIB_01172	8.75e-198	yitS	-	-	S	-	-	-	EDD domain protein, DegV family
CLEDNEIB_01173	6.3e-110	-	-	-	K	-	-	-	Domain of unknown function (DUF1836)
CLEDNEIB_01174	5.14e-19	-	-	-	S	-	-	-	Fic/DOC family
CLEDNEIB_01175	2.22e-68	-	-	-	L	-	-	-	Probable transposase
CLEDNEIB_01176	4.07e-72	-	-	-	T	ko:K07171	-	ko00000,ko01000,ko02048	PemK-like, MazF-like toxin of type II toxin-antitoxin system
CLEDNEIB_01177	1.27e-49	-	-	-	-	-	-	-	-
CLEDNEIB_01178	8.86e-62	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
CLEDNEIB_01179	4.85e-20	-	-	-	S	-	-	-	Phage derived protein Gp49-like (DUF891)
CLEDNEIB_01181	7.34e-22	XK27_01125	-	-	L	ko:K07484	-	ko00000	PFAM IS66 Orf2 family protein
CLEDNEIB_01183	2.78e-202	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
CLEDNEIB_01184	2.96e-133	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
CLEDNEIB_01185	0.0	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
CLEDNEIB_01186	0.0	pepV	3.5.1.18	-	E	ko:K01270,ko:K01274,ko:K01439	ko00300,ko00480,ko01100,ko01120,ko01230,map00300,map00480,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000,ko01002	dipeptidase PepV
CLEDNEIB_01187	1.28e-241	flp	-	-	V	-	-	-	Beta-lactamase
CLEDNEIB_01188	0.0	ppc	4.1.1.31	-	H	ko:K01595	ko00620,ko00680,ko00710,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00710,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
CLEDNEIB_01189	3.44e-58	-	-	-	-	-	-	-	-
CLEDNEIB_01190	7.54e-174	-	-	-	-	-	-	-	-
CLEDNEIB_01191	1.6e-114	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
CLEDNEIB_01192	3.57e-84	-	-	-	S	-	-	-	Protein of unknown function (DUF3021)
CLEDNEIB_01193	7.65e-101	-	-	-	K	-	-	-	LytTr DNA-binding domain
CLEDNEIB_01194	1.66e-56	-	-	-	-	-	-	-	-
CLEDNEIB_01195	1.35e-161	nth2	-	-	L	ko:K07457	-	ko00000	Base excision DNA repair protein, HhH-GPD family
CLEDNEIB_01196	1.44e-31	-	-	-	K	ko:K07729	-	ko00000,ko03000	Helix-turn-helix XRE-family like proteins
CLEDNEIB_01197	8.01e-68	-	-	-	-	-	-	-	-
CLEDNEIB_01198	3.37e-190	glxR	1.1.1.31	-	I	ko:K00020	ko00280,ko01100,map00280,map01100	ko00000,ko00001,ko01000	Dehydrogenase
CLEDNEIB_01199	1.23e-291	-	-	-	L	ko:K07478	-	ko00000	AAA C-terminal domain
CLEDNEIB_01200	7.55e-44	-	-	-	-	-	-	-	-
CLEDNEIB_01201	7.02e-89	fabK	1.3.1.9	-	S	ko:K02371	ko00061,ko01100,ko01212,map00061,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Nitronate monooxygenase
CLEDNEIB_01202	8.62e-109	kptA	-	-	H	ko:K07559	-	ko00000,ko01000,ko03016	Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP- ribose 1''-2''-cyclic phosphate (APPR P). May function as an ADP- ribosylase
CLEDNEIB_01203	8.81e-82	-	-	-	S	-	-	-	Abi-like protein
CLEDNEIB_01205	9.53e-161	-	-	-	S	ko:K07045	-	ko00000	Amidohydrolase
CLEDNEIB_01206	2.61e-133	-	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	Maltose acetyltransferase
CLEDNEIB_01207	9.52e-141	-	-	-	G	-	-	-	Antibiotic biosynthesis monooxygenase
CLEDNEIB_01208	5.45e-37	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2255)
CLEDNEIB_01209	1.03e-91	adhR	-	-	K	ko:K21745	-	ko00000,ko03000	helix_turn_helix, mercury resistance
CLEDNEIB_01210	1.32e-144	glnP9	-	-	P	ko:K02029	-	ko00000,ko00002,ko02000	ABC transporter, permease protein
CLEDNEIB_01211	2.95e-139	glnP7	-	-	P	ko:K02029	-	ko00000,ko00002,ko02000	ABC transporter permease
CLEDNEIB_01212	1.89e-171	glnQ	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
CLEDNEIB_01213	2.08e-204	cjaA	-	-	ET	ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter substrate-binding protein
CLEDNEIB_01214	1.17e-168	ybbM	-	-	S	ko:K02069	-	ko00000,ko00002,ko02000	Uncharacterised protein family (UPF0014)
CLEDNEIB_01215	6.64e-146	ybbL	-	-	S	ko:K02068	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
CLEDNEIB_01216	1.21e-40	-	-	-	K	ko:K07729	-	ko00000,ko03000	Helix-turn-helix XRE-family like proteins
CLEDNEIB_01218	1.49e-203	-	-	-	V	-	-	-	ABC transporter transmembrane region
CLEDNEIB_01220	1.49e-312	-	4.2.1.11	-	G	ko:K01689	ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066	ko00000,ko00001,ko00002,ko01000,ko03019,ko04147	Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
CLEDNEIB_01221	0.0	-	-	-	L	-	-	-	Type III restriction enzyme, res subunit
CLEDNEIB_01222	4.16e-255	-	-	-	L	-	-	-	DNA methylAse
CLEDNEIB_01223	1.64e-263	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
CLEDNEIB_01224	6.46e-37	-	-	-	-	-	-	-	-
CLEDNEIB_01225	1.55e-207	-	-	-	EP	-	-	-	Plasmid replication protein
CLEDNEIB_01227	1.11e-81	-	-	-	D	-	-	-	COG1674 DNA segregation ATPase FtsK SpoIIIE and related proteins
CLEDNEIB_01228	1.27e-21	-	-	-	-	-	-	-	-
CLEDNEIB_01231	4.84e-34	-	-	-	K	-	-	-	Probable zinc-ribbon domain
CLEDNEIB_01232	1.04e-250	-	-	-	V	-	-	-	Protein of unknown function DUF262
CLEDNEIB_01233	6.67e-99	-	-	-	S	-	-	-	Adenine-specific methyltransferase EcoRI
CLEDNEIB_01234	1.87e-55	-	-	-	S	-	-	-	Adenine-specific methyltransferase EcoRI
CLEDNEIB_01235	7.47e-64	tnpA1	-	-	L	-	-	-	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
CLEDNEIB_01236	2.07e-170	glpQ1	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	glycerophosphoryl diester phosphodiesterase
CLEDNEIB_01237	5.39e-292	-	-	-	G	-	-	-	Antibiotic biosynthesis monooxygenase
CLEDNEIB_01238	3.24e-143	-	-	-	G	-	-	-	Phosphoglycerate mutase family
CLEDNEIB_01239	9.67e-250	-	-	-	D	-	-	-	nuclear chromosome segregation
CLEDNEIB_01240	3.08e-121	-	-	-	M	-	-	-	LysM domain protein
CLEDNEIB_01241	5.26e-19	-	-	-	-	-	-	-	-
CLEDNEIB_01242	5.1e-33	pphA	3.1.3.16	-	T	ko:K07313	-	ko00000,ko01000	Calcineurin-like phosphoesterase
CLEDNEIB_01243	1.56e-121	pphA	3.1.3.16	-	T	ko:K07313	-	ko00000,ko01000	Calcineurin-like phosphoesterase
CLEDNEIB_01244	4.63e-88	-	-	-	-	-	-	-	-
CLEDNEIB_01245	1.52e-43	-	-	-	-	-	-	-	-
CLEDNEIB_01246	4.09e-92	-	-	-	S	-	-	-	Iron-sulphur cluster biosynthesis
CLEDNEIB_01247	8.08e-68	-	-	-	K	-	-	-	Helix-turn-helix domain, rpiR family
CLEDNEIB_01248	9.96e-291	nagA	3.5.1.25	-	G	ko:K01443	ko00520,ko01130,map00520,map01130	ko00000,ko00001,ko01000	Belongs to the metallo-dependent hydrolases superfamily. NagA family
CLEDNEIB_01249	1.96e-164	-	-	-	K	ko:K03710	-	ko00000,ko03000	UTRA
CLEDNEIB_01251	1.63e-87	-	-	-	C	-	-	-	FAD binding domain
CLEDNEIB_01252	5.84e-32	-	-	-	C	-	-	-	FAD binding domain
CLEDNEIB_01253	5.65e-60	-	-	-	C	-	-	-	FAD binding domain
CLEDNEIB_01254	4.9e-11	-	-	-	K	-	-	-	Bacterial regulatory helix-turn-helix protein, lysR family
CLEDNEIB_01255	1.98e-179	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2263)
CLEDNEIB_01256	3.9e-79	-	-	-	-	-	-	-	-
CLEDNEIB_01257	0.0	-	-	-	L	ko:K03724	-	ko00000,ko01000,ko03400	DEAD DEAH box helicase
CLEDNEIB_01258	0.0	-	-	-	P	-	-	-	P-loop Domain of unknown function (DUF2791)
CLEDNEIB_01259	0.0	-	-	-	S	-	-	-	TerB-C domain
CLEDNEIB_01260	0.0	pckA	4.1.1.49	-	H	ko:K01610	ko00010,ko00020,ko00620,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00710,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Phosphoenolpyruvate carboxykinase
CLEDNEIB_01261	0.0	glgB	2.4.1.18	CBM48,GH13	G	ko:K00700	ko00500,ko01100,ko01110,map00500,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
CLEDNEIB_01262	5.78e-268	glgC	2.7.7.27	-	H	ko:K00975	ko00500,ko00520,ko01100,ko01110,ko02026,map00500,map00520,map01100,map01110,map02026	ko00000,ko00001,ko00002,ko01000	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
CLEDNEIB_01263	1.82e-276	glgD	2.7.7.27	-	G	ko:K00975	ko00500,ko00520,ko01100,ko01110,ko02026,map00500,map00520,map01100,map01110,map02026	ko00000,ko00001,ko00002,ko01000	Nucleotidyl transferase
CLEDNEIB_01264	0.0	glgA	2.4.1.21	GT5	F	ko:K00703	ko00500,ko01100,ko01110,ko02026,map00500,map01100,map01110,map02026	ko00000,ko00001,ko00002,ko01000,ko01003	Synthesizes alpha-1,4-glucan chains using ADP-glucose
CLEDNEIB_01265	0.0	glgP	2.4.1.1	GT35	G	ko:K00688	ko00500,ko01100,ko01110,ko02026,ko04217,ko04910,ko04922,ko04931,map00500,map01100,map01110,map02026,map04217,map04910,map04922,map04931	ko00000,ko00001,ko01000	Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
CLEDNEIB_01266	0.0	malZ	3.2.1.20, 3.2.1.41	CBM48,GH13,GH31	G	ko:K01187,ko:K01200	ko00052,ko00500,ko01100,ko01110,map00052,map00500,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 13 family
CLEDNEIB_01267	0.0	pgm	5.4.2.2	-	G	ko:K01835	ko00010,ko00030,ko00052,ko00230,ko00500,ko00520,ko00521,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00052,map00230,map00500,map00520,map00521,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
CLEDNEIB_01268	0.0	uvrB	-	-	L	ko:K03702	ko03420,map03420	ko00000,ko00001,ko03400	damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
CLEDNEIB_01269	0.0	uvrA	-	-	L	ko:K03701	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
CLEDNEIB_01270	2.64e-109	-	-	-	S	-	-	-	Short repeat of unknown function (DUF308)
CLEDNEIB_01271	2.09e-211	yvcJ	-	-	S	ko:K06958	-	ko00000,ko03019	Displays ATPase and GTPase activities
CLEDNEIB_01272	1.27e-247	yvcK	-	-	S	-	-	-	Required for morphogenesis under gluconeogenic growth conditions
CLEDNEIB_01273	8.23e-219	whiA	-	-	K	ko:K09762	-	ko00000	May be required for sporulation
CLEDNEIB_01274	6.18e-33	ykuL	-	-	S	-	-	-	IMP dehydrogenase activity
CLEDNEIB_01275	2.11e-273	-	-	-	S	-	-	-	Membrane
CLEDNEIB_01276	5.74e-67	-	-	-	-	-	-	-	-
CLEDNEIB_01277	6.46e-27	-	-	-	S	-	-	-	D-Ala-teichoic acid biosynthesis protein
CLEDNEIB_01278	0.0	dltA	6.1.1.13	-	H	ko:K03367	ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01000,ko01504	Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
CLEDNEIB_01279	2.53e-305	dltB	-	-	M	ko:K03739	ko01503,ko02020,ko05150,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01504	MBOAT, membrane-bound O-acyltransferase family
CLEDNEIB_01280	1e-47	dltC	6.1.1.13	-	J	ko:K14188	ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01000,ko01504	Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
CLEDNEIB_01281	1.53e-305	dltD	-	-	M	ko:K03740	ko01503,ko02020,ko05150,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01504	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
CLEDNEIB_01282	9.29e-222	pbpX2	-	-	V	-	-	-	Beta-lactamase
CLEDNEIB_01284	5.67e-11	-	-	-	-	-	-	-	-
CLEDNEIB_01285	4.44e-160	-	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
CLEDNEIB_01286	6.93e-39	-	-	-	-	-	-	-	-
CLEDNEIB_01287	6.79e-44	-	-	-	-	-	-	-	-
CLEDNEIB_01288	2.81e-22	-	-	-	-	-	-	-	-
CLEDNEIB_01289	3.54e-156	-	-	-	S	-	-	-	Protein of unknown function (DUF975)
CLEDNEIB_01290	2.72e-199	lysA2	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
CLEDNEIB_01291	0.0	ytgP	-	-	S	ko:K03328	-	ko00000	Polysaccharide biosynthesis protein
CLEDNEIB_01292	8e-49	-	-	-	-	-	-	-	-
CLEDNEIB_01293	1.9e-237	ylbB	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter permease
CLEDNEIB_01294	3.5e-103	ylbB	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter permease
CLEDNEIB_01295	1.95e-24	ylbB	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter permease
CLEDNEIB_01296	1.26e-160	-	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
CLEDNEIB_01297	3.37e-274	pts13C	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
CLEDNEIB_01298	3.25e-199	-	-	-	S	-	-	-	Alpha/beta hydrolase of unknown function (DUF915)
CLEDNEIB_01299	0.0	clpE	-	-	O	ko:K03697,ko:K04086	-	ko00000,ko03110	AAA domain (Cdc48 subfamily)
CLEDNEIB_01300	3.58e-155	sipS3	3.4.21.89	-	U	ko:K03100	ko02024,ko03060,map02024,map03060	ko00000,ko00001,ko01000,ko01002	Belongs to the peptidase S26 family
CLEDNEIB_01301	1.2e-162	-	-	-	-	-	-	-	-
CLEDNEIB_01302	8.93e-300	aapA	-	-	E	ko:K03293,ko:K11737	-	ko00000,ko02000	Amino acid permease
CLEDNEIB_01303	4.14e-311	yifK	-	-	E	ko:K03293	-	ko00000	Amino acid permease
CLEDNEIB_01304	9.08e-20	puuD	-	-	S	ko:K07010	-	ko00000,ko01002	peptidase C26
CLEDNEIB_01305	3.66e-133	-	-	-	E	-	-	-	amino acid
CLEDNEIB_01306	2.64e-244	asnA	6.3.1.1	-	F	ko:K01914	ko00250,ko00460,ko01100,ko01110,ko01230,map00250,map00460,map01100,map01110,map01230	ko00000,ko00001,ko01000	aspartate--ammonia ligase
CLEDNEIB_01307	1.83e-258	-	4.2.1.126	-	S	ko:K07106,ko:K09963	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Bacterial protein of unknown function (DUF871)
CLEDNEIB_01310	2.73e-232	guaC	1.7.1.7	-	F	ko:K00364	ko00230,map00230	ko00000,ko00001,ko01000	Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
CLEDNEIB_01311	1.14e-312	purA	6.3.4.4	-	F	ko:K01939	ko00230,ko00250,ko01100,map00230,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
CLEDNEIB_01312	5.62e-310	purB	4.3.2.2	-	F	ko:K01756	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
CLEDNEIB_01313	2.89e-75	-	-	-	-	-	-	-	-
CLEDNEIB_01314	7.7e-110	-	-	-	-	-	-	-	-
CLEDNEIB_01315	5.86e-39	yheS_2	-	-	S	ko:K18231,ko:K19349	ko02010,map02010	br01600,ko00000,ko00001,ko01504,ko02000	ATPases associated with a variety of cellular activities
CLEDNEIB_01316	1.15e-170	yheS_2	-	-	S	ko:K18231,ko:K19349	ko02010,map02010	br01600,ko00000,ko00001,ko01504,ko02000	ATPases associated with a variety of cellular activities
CLEDNEIB_01317	1.6e-220	-	-	-	S	-	-	-	DUF218 domain
CLEDNEIB_01318	5.49e-102	-	-	-	-	-	-	-	-
CLEDNEIB_01319	6.83e-140	-	-	-	-	-	-	-	-
CLEDNEIB_01320	1.11e-205	-	-	-	EG	-	-	-	EamA-like transporter family
CLEDNEIB_01321	2.29e-107	-	-	-	M	-	-	-	NlpC/P60 family
CLEDNEIB_01322	1.57e-170	cobQ	-	-	S	ko:K07009	-	ko00000	glutamine amidotransferase
CLEDNEIB_01323	1.83e-192	thiD	2.7.1.49, 2.7.4.7	-	H	ko:K00941	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Phosphomethylpyrimidine kinase
CLEDNEIB_01324	3e-289	glpK	2.7.1.30	-	F	ko:K00864	ko00561,ko01100,ko03320,ko04626,map00561,map01100,map03320,map04626	ko00000,ko00001,ko01000,ko04147	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
CLEDNEIB_01325	1.91e-190	-	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Tyrosine phosphatase family
CLEDNEIB_01326	3.38e-225	yvdE	-	-	K	-	-	-	helix_turn _helix lactose operon repressor
CLEDNEIB_01327	7.31e-161	ackA	2.7.2.1	-	H	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
CLEDNEIB_01328	0.0	malA1	3.2.1.10, 3.2.1.20	GH13,GH31	G	ko:K01182,ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Alpha amylase, catalytic domain
CLEDNEIB_01329	0.0	nplT	3.2.1.133, 3.2.1.135, 3.2.1.54	GH13	G	ko:K01208	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 13 family
CLEDNEIB_01330	0.0	mapA	2.4.1.8	GH65	G	ko:K00691	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	hydrolase, family 65, central catalytic
CLEDNEIB_01331	2.04e-150	pgmB	5.4.2.6	-	S	ko:K01838	ko00500,map00500	ko00000,ko00001,ko01000	beta-phosphoglucomutase
CLEDNEIB_01332	3.36e-227	msmX	-	-	P	ko:K10112	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
CLEDNEIB_01333	1.29e-280	malE	-	-	G	ko:K15770	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding protein
CLEDNEIB_01334	0.0	malF	-	-	P	ko:K15771	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
CLEDNEIB_01335	1.39e-197	malG	-	-	P	ko:K15772	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
CLEDNEIB_01336	2.66e-55	ymdB	-	-	S	-	-	-	Macro domain protein
CLEDNEIB_01337	7.07e-38	tnpR	-	-	L	-	-	-	Resolvase, N terminal domain
CLEDNEIB_01338	6.08e-50	-	-	-	M	-	-	-	Collagen binding domain
CLEDNEIB_01339	2.4e-179	-	-	-	M	-	-	-	Collagen binding domain
CLEDNEIB_01340	0.0	-	1.8.1.7	-	C	ko:K00383,ko:K21739	ko00480,ko04918,map00480,map04918	ko00000,ko00001,ko01000	Pyridine nucleotide-disulfide oxidoreductase
CLEDNEIB_01341	2.57e-219	lysC	2.7.2.4	-	E	ko:K00928	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the aspartokinase family
CLEDNEIB_01342	5.79e-311	thrC	4.2.3.1	-	E	ko:K01733	ko00260,ko00750,ko01100,ko01110,ko01120,ko01230,map00260,map00750,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Threonine synthase
CLEDNEIB_01343	6.86e-154	hom	1.1.1.3	-	E	ko:K00003	ko00260,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00270,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	homoserine dehydrogenase
CLEDNEIB_01344	3.13e-141	thrB	2.7.1.39	-	F	ko:K00872	ko00260,ko01100,ko01110,ko01120,ko01230,map00260,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
CLEDNEIB_01345	1.95e-137	-	-	-	-	-	-	-	-
CLEDNEIB_01346	1.78e-208	yitT	-	-	S	-	-	-	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CLEDNEIB_01347	3.85e-52	-	-	-	S	-	-	-	Peptidase family M23
CLEDNEIB_01348	1.34e-196	yqfL	2.7.11.33, 2.7.4.28	-	F	ko:K09773	-	ko00000,ko01000	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
CLEDNEIB_01349	4.83e-30	rpsU	-	-	J	ko:K02970	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bS21 family
CLEDNEIB_01350	5.12e-91	yqeY	-	-	S	ko:K09117	-	ko00000	YqeY-like protein
CLEDNEIB_01351	7.92e-221	phoH	-	-	T	ko:K06217	-	ko00000	phosphate starvation-inducible protein PhoH
CLEDNEIB_01352	1.03e-128	ybeY	-	-	S	ko:K07042	-	ko00000,ko03009	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
CLEDNEIB_01353	7.03e-215	era	-	-	S	ko:K03595	-	ko00000,ko03009,ko03029	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
CLEDNEIB_01354	5.64e-175	recO	-	-	L	ko:K03584	ko03440,map03440	ko00000,ko00001,ko03400	Involved in DNA repair and RecF pathway recombination
CLEDNEIB_01355	2.22e-229	glyQ	6.1.1.14	-	J	ko:K01878	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	glycyl-tRNA synthetase alpha subunit
CLEDNEIB_01356	0.0	glyS	6.1.1.14	-	J	ko:K01879	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Glycyl-tRNA synthetase beta subunit
CLEDNEIB_01357	0.0	dnaG	-	-	L	ko:K02316	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
CLEDNEIB_01358	2.88e-251	sigA	-	-	K	ko:K03086	-	ko00000,ko03021	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
CLEDNEIB_01359	3.44e-160	-	-	-	S	-	-	-	Peptidase family M23
CLEDNEIB_01360	1.33e-79	-	3.6.1.55	-	F	ko:K03574	-	ko00000,ko01000,ko03400	NUDIX domain
CLEDNEIB_01362	1.69e-44	-	-	-	S	-	-	-	Acyltransferase family
CLEDNEIB_01363	8.1e-175	cps2J	-	-	S	-	-	-	Polysaccharide biosynthesis protein
CLEDNEIB_01364	1.37e-29	-	-	-	M	-	-	-	Capsular polysaccharide synthesis protein
CLEDNEIB_01365	9.36e-40	-	-	-	M	-	-	-	Glycosyltransferase sugar-binding region containing DXD motif
CLEDNEIB_01366	4.24e-36	epsJ2	-	-	S	-	-	-	Glycosyltransferase like family 2
CLEDNEIB_01368	4.06e-173	-	-	GT4	M	ko:K19424	-	ko00000,ko01000,ko01003	Glycosyl transferases group 1
CLEDNEIB_01369	1.64e-100	-	-	-	S	-	-	-	Glycosyltransferase family 28 C-terminal domain
CLEDNEIB_01370	4.06e-107	-	-	-	M	-	-	-	Oligosaccharide biosynthesis protein Alg14 like
CLEDNEIB_01371	6.94e-97	-	-	-	M	-	-	-	Glycosyltransferase
CLEDNEIB_01372	7.62e-104	-	-	-	M	-	-	-	Glycosyltransferase
CLEDNEIB_01373	7.88e-157	epsE2	-	-	M	-	-	-	Bacterial sugar transferase
CLEDNEIB_01374	1.57e-184	ywqE	3.1.3.48	-	GM	ko:K01104	-	ko00000,ko01000	PHP domain protein
CLEDNEIB_01375	7.51e-156	ywqD	-	-	D	-	-	-	Capsular exopolysaccharide family
CLEDNEIB_01376	6.28e-178	epsB	-	-	M	-	-	-	biosynthesis protein
CLEDNEIB_01377	8.58e-249	brpA	-	-	K	-	-	-	Cell envelope-like function transcriptional attenuator common domain protein
CLEDNEIB_01378	5.52e-284	hflX	-	-	S	ko:K03665	-	ko00000,ko03009	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
CLEDNEIB_01379	3.7e-235	-	-	-	S	-	-	-	Cysteine-rich secretory protein family
CLEDNEIB_01380	3.97e-97	-	-	-	S	-	-	-	Protein of unknown function (DUF3021)
CLEDNEIB_01381	1.96e-98	-	-	-	K	-	-	-	LytTr DNA-binding domain
CLEDNEIB_01382	3.82e-137	-	3.6.1.66	-	F	ko:K02428	ko00230,map00230	ko00000,ko00001,ko01000	Ham1 family
CLEDNEIB_01384	5.17e-08	-	-	-	S	-	-	-	Protein of unknown function (DUF3923)
CLEDNEIB_01385	0.0	uvrA2	-	-	L	ko:K03701	ko03420,map03420	ko00000,ko00001,ko03400	excinuclease ABC, A subunit
CLEDNEIB_01386	5.75e-124	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
CLEDNEIB_01387	1.06e-48	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
CLEDNEIB_01388	7.31e-81	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
CLEDNEIB_01390	7.56e-77	-	-	-	S	-	-	-	YjbR
CLEDNEIB_01391	2.15e-113	-	-	-	P	ko:K05846	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter, permease protein
CLEDNEIB_01392	3.92e-141	proV	-	-	E	ko:K05847	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter, ATP-binding protein
CLEDNEIB_01393	1.17e-114	proWZ	-	-	P	ko:K05846	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
CLEDNEIB_01394	1.62e-187	proWY	-	-	M	ko:K05845	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter, substrate-binding protein, QAT family
CLEDNEIB_01395	7.05e-157	-	-	-	C	-	-	-	Zinc-binding dehydrogenase
CLEDNEIB_01396	1.47e-63	-	-	-	S	-	-	-	Membrane
CLEDNEIB_01397	1.36e-114	-	-	-	S	-	-	-	Membrane
CLEDNEIB_01398	2.03e-34	-	-	-	I	-	-	-	carboxylic ester hydrolase activity
CLEDNEIB_01399	4.04e-81	-	-	-	S	-	-	-	Alpha/beta hydrolase family
CLEDNEIB_01400	4.61e-42	bioY2	-	-	S	ko:K03523	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Biotin synthase
CLEDNEIB_01401	1.11e-37	-	-	-	S	-	-	-	HicB family
CLEDNEIB_01403	7.52e-80	-	-	-	S	-	-	-	Bacterial toxin of type II toxin-antitoxin system, YafQ
CLEDNEIB_01404	2.73e-60	-	-	-	D	ko:K19159	-	ko00000,ko02048	Antitoxin component of a toxin-antitoxin (TA) module
CLEDNEIB_01405	1.12e-90	-	-	-	S	-	-	-	Nucleotidyl transferase AbiEii toxin, Type IV TA system
CLEDNEIB_01406	7.18e-124	-	-	-	K	-	-	-	Transcriptional regulator, AbiEi antitoxin
CLEDNEIB_01407	1.64e-108	-	-	-	L	-	-	-	Integrase
CLEDNEIB_01408	9.55e-244	-	-	-	S	-	-	-	SLAP domain
CLEDNEIB_01409	6.3e-225	prs	2.7.6.1	-	F	ko:K00948	ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
CLEDNEIB_01410	1.67e-187	-	-	-	GK	-	-	-	ROK family
CLEDNEIB_01411	5.78e-57	-	-	-	-	-	-	-	-
CLEDNEIB_01412	0.0	-	-	-	S	ko:K06885	-	ko00000	Metal dependent phosphohydrolases with conserved 'HD' motif.
CLEDNEIB_01413	6.77e-87	-	-	-	S	-	-	-	Domain of unknown function (DUF1934)
CLEDNEIB_01414	5.46e-95	rpoE	-	-	K	ko:K03048	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko03021,ko03400	Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
CLEDNEIB_01415	0.0	pyrG	6.3.4.2	-	F	ko:K01937	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
CLEDNEIB_01416	3.13e-311	murA	2.5.1.7	-	M	ko:K00790	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
CLEDNEIB_01417	9.13e-43	-	-	-	S	-	-	-	Haloacid dehalogenase-like hydrolase
CLEDNEIB_01418	2.55e-64	-	-	-	S	-	-	-	Haloacid dehalogenase-like hydrolase
CLEDNEIB_01419	0.0	pepDA	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
CLEDNEIB_01420	2.25e-202	msmR	-	-	K	-	-	-	AraC-like ligand binding domain
CLEDNEIB_01421	5.72e-284	pbuX	-	-	F	ko:K03458,ko:K16169	-	ko00000,ko02000	xanthine permease
CLEDNEIB_01422	2.34e-127	xpt	2.4.2.22	-	F	ko:K03816	ko00230,ko01100,ko01110,map00230,map01100,map01110	ko00000,ko00001,ko01000	Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
CLEDNEIB_01423	1.13e-141	-	-	-	K	-	-	-	DNA-binding helix-turn-helix protein
CLEDNEIB_01424	1.73e-24	-	-	-	K	-	-	-	Helix-turn-helix
CLEDNEIB_01425	5.15e-24	-	-	-	K	-	-	-	Helix-turn-helix
CLEDNEIB_01426	0.0	guaA	6.3.5.2	-	F	ko:K01951	ko00230,ko00983,ko01100,map00230,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko01002	Catalyzes the synthesis of GMP from XMP
CLEDNEIB_01427	2.26e-81	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
CLEDNEIB_01428	5.51e-147	pyrE	2.4.2.10	-	F	ko:K00762	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
CLEDNEIB_01429	1.08e-155	pyrF	4.1.1.23	-	F	ko:K01591	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
CLEDNEIB_01430	1.2e-209	pyrD	1.3.1.14, 1.3.98.1	-	F	ko:K00226,ko:K17828	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
CLEDNEIB_01431	5.63e-120	pyrR	2.4.2.9	-	F	ko:K02825	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000,ko03000	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
CLEDNEIB_01432	2.7e-232	pyrB	2.1.3.2	-	F	ko:K00609	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the ATCase OTCase family
CLEDNEIB_01433	5.38e-309	pyrC	3.5.2.3	-	F	ko:K01465	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
CLEDNEIB_01434	3.47e-268	carA	6.3.5.5	-	F	ko:K01956	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthetase glutamine chain
CLEDNEIB_01435	0.0	carB	6.3.5.5	-	F	ko:K01955	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthase
CLEDNEIB_01437	7.52e-284	-	-	-	E	-	-	-	IrrE N-terminal-like domain
CLEDNEIB_01438	1.28e-140	-	-	-	S	-	-	-	Domain of unknown function (DUF4411)
CLEDNEIB_01439	4.64e-108	-	-	-	U	ko:K05340	-	ko00000,ko02000	sugar transport
CLEDNEIB_01440	4.89e-54	-	-	-	U	ko:K05340	-	ko00000,ko02000	sugar transport
CLEDNEIB_01441	1.29e-63	-	-	-	-	-	-	-	-
CLEDNEIB_01442	4.44e-104	msrB	1.8.4.12	-	O	ko:K07305	-	ko00000,ko01000	peptide methionine sulfoxide reductase
CLEDNEIB_01443	2e-24	-	-	-	-	-	-	-	-
CLEDNEIB_01444	8.65e-23	-	-	-	-	-	-	-	-
CLEDNEIB_01445	1.47e-105	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
CLEDNEIB_01446	7.23e-189	-	-	-	S	-	-	-	Protein of unknown function (DUF2785)
CLEDNEIB_01447	5.6e-80	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
CLEDNEIB_01448	3.74e-115	ybaK	-	-	S	ko:K03976	-	ko00000,ko01000,ko03016	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
CLEDNEIB_01449	1.43e-221	prmA	-	-	J	ko:K02687	-	ko00000,ko01000,ko03009	Ribosomal protein L11 methyltransferase
CLEDNEIB_01450	1.55e-79	-	-	-	-	-	-	-	-
CLEDNEIB_01451	0.0	relA	2.7.6.5	-	KT	ko:K00951	ko00230,map00230	ko00000,ko00001,ko01000	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
CLEDNEIB_01452	4.97e-97	dtd	-	-	J	ko:K07560	-	ko00000,ko01000,ko03016	rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
CLEDNEIB_01453	7.41e-313	hisS	6.1.1.21	-	J	ko:K01892	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	histidyl-tRNA synthetase
CLEDNEIB_01454	0.0	aspS	6.1.1.12	-	J	ko:K01876	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
CLEDNEIB_01455	6.16e-281	aspC	-	-	E	ko:K00841	ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase
CLEDNEIB_01456	7.46e-279	coaBC	4.1.1.36, 6.3.2.5	-	H	ko:K01598,ko:K13038	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
CLEDNEIB_01457	3.02e-46	-	-	-	S	-	-	-	reductase
CLEDNEIB_01458	1.77e-95	-	-	-	S	-	-	-	reductase
CLEDNEIB_01459	1.83e-109	yxeH	-	-	S	-	-	-	hydrolase
CLEDNEIB_01460	2.29e-34	yxeH	-	-	S	-	-	-	hydrolase
CLEDNEIB_01461	1.04e-19	gyaR	1.1.1.215, 1.1.1.26, 1.1.1.79, 1.1.1.81	-	CH	ko:K00015,ko:K00090	ko00030,ko00260,ko00620,ko00630,ko01100,ko01110,ko01120,map00030,map00260,map00620,map00630,map01100,map01110,map01120	ko00000,ko00001,ko01000	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CLEDNEIB_01462	4.04e-101	gyaR	1.1.1.26, 1.1.1.399, 1.1.1.95	-	CH	ko:K00015,ko:K00058	ko00260,ko00630,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00260,map00630,map00680,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CLEDNEIB_01463	4.95e-57	gyaR	1.1.1.215, 1.1.1.26, 1.1.1.79, 1.1.1.81	-	CH	ko:K00015,ko:K00090	ko00030,ko00260,ko00620,ko00630,ko01100,ko01110,ko01120,map00030,map00260,map00620,map00630,map01100,map01110,map01120	ko00000,ko00001,ko01000	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CLEDNEIB_01464	0.0	yhdG	-	-	E	ko:K03294	-	ko00000	Amino Acid
CLEDNEIB_01465	1.24e-97	yngC	-	-	S	-	-	-	SNARE associated Golgi protein
CLEDNEIB_01466	3.32e-14	yngC	-	-	S	-	-	-	SNARE associated Golgi protein
CLEDNEIB_01467	5.69e-88	mrr2	-	-	L	ko:K07448	-	ko00000,ko02048	restriction endonuclease
CLEDNEIB_01468	2.76e-40	-	-	-	S	-	-	-	Psort location Cytoplasmic, score
CLEDNEIB_01470	7e-96	-	3.1.21.3	-	V	ko:K01154	-	ko00000,ko01000,ko02048	Type I restriction modification DNA specificity domain
CLEDNEIB_01471	1.57e-82	hsdS	3.1.21.3	-	V	ko:K01154	-	ko00000,ko01000,ko02048	Type I restriction modification DNA specificity domain
CLEDNEIB_01472	0.0	hsdM	2.1.1.72	-	V	ko:K03427	-	ko00000,ko01000,ko02048	type I restriction-modification system
CLEDNEIB_01473	0.0	hsdR	3.1.21.3	-	L	ko:K01153	-	ko00000,ko01000,ko02048	DEAD/DEAH box helicase
CLEDNEIB_01474	1.5e-245	tcaA	-	-	S	ko:K21463	-	ko00000	response to antibiotic
CLEDNEIB_01475	1.56e-33	-	-	-	S	-	-	-	response to antibiotic
CLEDNEIB_01476	1.23e-259	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
CLEDNEIB_01477	2.75e-66	-	-	-	S	-	-	-	SLAP domain
CLEDNEIB_01478	9.02e-51	-	-	-	-	-	-	-	-
CLEDNEIB_01480	1.31e-10	-	-	-	-	-	-	-	-
CLEDNEIB_01481	1.52e-74	-	-	-	-	-	-	-	-
CLEDNEIB_01482	1.96e-23	-	-	-	-	-	-	-	-
CLEDNEIB_01483	1.48e-26	-	-	-	-	-	-	-	-
CLEDNEIB_01484	1.46e-70	-	-	-	S	-	-	-	Uncharacterised protein family (UPF0236)
CLEDNEIB_01485	1.53e-164	-	-	-	-	-	-	-	-
CLEDNEIB_01486	2.41e-210	-	1.1.1.29	-	CH	ko:K00018	ko00260,ko00630,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,map00260,map00630,map00680,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CLEDNEIB_01487	4.7e-62	-	-	-	-	-	-	-	-
CLEDNEIB_01488	4.72e-72	-	-	-	-	-	-	-	-
CLEDNEIB_01489	2.85e-81	ptsG	2.7.1.199, 2.7.1.208	-	G	ko:K02777,ko:K02778,ko:K02779,ko:K02790,ko:K02791	ko00010,ko00500,ko00520,ko02026,ko02060,ko05111,map00010,map00500,map00520,map02026,map02060,map05111	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system, EIIB
CLEDNEIB_01490	1.1e-277	-	-	-	EGP	ko:K08196,ko:K08369	-	ko00000,ko02000	Major Facilitator
CLEDNEIB_01491	0.0	XK27_00340	3.1.3.5	-	F	ko:K01081	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the 5'-nucleotidase family
CLEDNEIB_01492	0.0	oppA	-	-	E	ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter
CLEDNEIB_01493	2.11e-271	-	-	-	Q	-	-	-	Imidazolonepropionase and related amidohydrolases
CLEDNEIB_01494	6.96e-81	psiE	-	-	S	ko:K13256	-	ko00000	Phosphate-starvation-inducible E
CLEDNEIB_01496	4.02e-283	galK	2.7.1.6	-	F	ko:K00849	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
CLEDNEIB_01497	0.0	galT	2.7.7.12	-	G	ko:K00965	ko00052,ko00520,ko01100,ko04917,map00052,map00520,map01100,map04917	ko00000,ko00001,ko00002,ko01000	UDP-glucose--hexose-1-phosphate uridylyltransferase
CLEDNEIB_01498	1.87e-250	galM	5.1.3.3	-	G	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the interconversion of alpha and beta anomers of maltose
CLEDNEIB_01499	2.61e-195	-	-	-	L	-	-	-	Phage integrase, N-terminal SAM-like domain
CLEDNEIB_01501	9e-226	lacX	5.1.3.3	-	G	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Aldose 1-epimerase
CLEDNEIB_01502	3.67e-310	hslU	-	-	O	ko:K03667	-	ko00000,ko03110	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
CLEDNEIB_01503	5.68e-117	hslV	3.4.25.2	-	O	ko:K01419	-	ko00000,ko01000,ko01002	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
CLEDNEIB_01504	3.92e-217	xerC	-	-	D	ko:K03733,ko:K04763	-	ko00000,ko03036	Phage integrase, N-terminal SAM-like domain
CLEDNEIB_01505	3.98e-313	trmFO	2.1.1.74	-	J	ko:K04094	-	ko00000,ko01000,ko03016,ko03036	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
CLEDNEIB_01506	0.0	topA	5.99.1.2	-	L	ko:K03168	-	ko00000,ko01000,ko03032,ko03400	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
CLEDNEIB_01507	8.1e-200	dprA	-	-	LU	ko:K04096	-	ko00000	DNA protecting protein DprA
CLEDNEIB_01508	3.81e-173	rnhB	3.1.26.4	-	L	ko:K03470	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
CLEDNEIB_01509	1.3e-201	rbgA	-	-	S	ko:K14540	-	ko00000,ko03009	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
CLEDNEIB_01510	0.0	nhaP4	-	-	P	ko:K03316	-	ko00000	Sodium proton antiporter
CLEDNEIB_01511	9.85e-49	yozE	-	-	S	-	-	-	Belongs to the UPF0346 family
CLEDNEIB_01512	8.27e-191	degV3	-	-	S	-	-	-	Uncharacterised protein, DegV family COG1307
CLEDNEIB_01513	2.1e-151	hlyIII	-	-	S	ko:K11068	-	ko00000,ko02042	protein, hemolysin III
CLEDNEIB_01514	2.83e-146	-	-	-	G	-	-	-	Peptidase_C39 like family
CLEDNEIB_01515	1.35e-82	-	-	-	M	-	-	-	NlpC/P60 family
CLEDNEIB_01516	6.69e-28	-	-	-	M	-	-	-	NlpC/P60 family
CLEDNEIB_01517	1.66e-15	-	-	-	M	-	-	-	NlpC/P60 family
CLEDNEIB_01519	5.12e-71	yitW	-	-	S	-	-	-	Iron-sulfur cluster assembly protein
CLEDNEIB_01520	3.8e-195	sdaAA	4.3.1.17	-	E	ko:K01752	ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230	ko00000,ko00001,ko01000	L-serine dehydratase, iron-sulfur-dependent, alpha subunit
CLEDNEIB_01521	1.06e-155	-	4.3.1.17	-	E	ko:K01752	ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230	ko00000,ko00001,ko01000	Serine dehydratase beta chain
CLEDNEIB_01522	7.15e-52	-	-	-	-	-	-	-	-
CLEDNEIB_01523	1.08e-89	-	-	-	L	-	-	-	COG2826 Transposase and inactivated derivatives, IS30 family
CLEDNEIB_01524	4.13e-148	glnP9	-	-	P	ko:K02029	-	ko00000,ko00002,ko02000	ABC transporter, permease protein
CLEDNEIB_01525	9.35e-152	glnP7	-	-	P	ko:K02029	-	ko00000,ko00002,ko02000	ABC transporter permease
CLEDNEIB_01526	9.75e-174	glnQ	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
CLEDNEIB_01527	2.63e-207	cjaA	-	-	ET	ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter substrate-binding protein
CLEDNEIB_01528	1.32e-68	yitW	-	-	S	-	-	-	Iron-sulfur cluster assembly protein
CLEDNEIB_01529	3.15e-198	sdaAA	4.3.1.17	-	E	ko:K01752	ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230	ko00000,ko00001,ko01000	L-serine dehydratase, iron-sulfur-dependent, alpha subunit
CLEDNEIB_01530	5.9e-97	-	4.3.1.17	-	E	ko:K01752	ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230	ko00000,ko00001,ko01000	Serine dehydratase beta chain
CLEDNEIB_01531	6.01e-16	-	4.3.1.17	-	E	ko:K01752	ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230	ko00000,ko00001,ko01000	Serine dehydratase beta chain
CLEDNEIB_01532	3.36e-61	-	-	-	-	-	-	-	-
CLEDNEIB_01533	1.34e-124	-	-	-	S	-	-	-	Cysteine-rich secretory protein family
CLEDNEIB_01534	8.46e-65	-	-	-	-	-	-	-	-
CLEDNEIB_01535	2.65e-260	-	-	-	G	-	-	-	Major Facilitator Superfamily
CLEDNEIB_01536	5.54e-69	-	-	-	-	-	-	-	-
CLEDNEIB_01537	6.74e-72	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
CLEDNEIB_01538	1.12e-196	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
CLEDNEIB_01540	2.21e-46	-	-	-	-	-	-	-	-
CLEDNEIB_01542	2.8e-169	yycF	-	-	K	ko:K07668	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	response regulator
CLEDNEIB_01543	0.0	vicK	2.7.13.3	-	T	ko:K07652	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
CLEDNEIB_01544	8.07e-314	yycH	-	-	S	-	-	-	YycH protein
CLEDNEIB_01545	1.18e-188	yycI	-	-	S	-	-	-	YycH protein
CLEDNEIB_01546	2.14e-191	vicX	3.1.26.11	-	S	ko:K00784	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	domain protein
CLEDNEIB_01547	1.18e-274	htrA	3.4.21.107	-	O	ko:K04771	ko01503,ko02020,map01503,map02020	ko00000,ko00001,ko00002,ko01000,ko01002,ko03110	serine protease
CLEDNEIB_01548	2.23e-117	rlmH	2.1.1.177	-	J	ko:K00783	-	ko00000,ko01000,ko03009	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
CLEDNEIB_01549	3.99e-49	-	-	-	K	-	-	-	Helix-turn-helix domain
CLEDNEIB_01550	2.42e-30	-	-	-	K	-	-	-	Helix-turn-helix domain
CLEDNEIB_01552	8.22e-103	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter
CLEDNEIB_01553	3.18e-50	-	-	-	-	ko:K01992	-	ko00000,ko00002,ko02000	-
CLEDNEIB_01554	6.21e-41	axe	-	-	K	ko:K21498	-	ko00000,ko02048	Helix-turn-helix XRE-family like proteins
CLEDNEIB_01555	2.78e-222	pepI	3.4.11.5	-	E	ko:K01259	ko00330,map00330	ko00000,ko00001,ko01000,ko01002	Releases the N-terminal proline from various substrates
CLEDNEIB_01556	5.2e-125	-	-	-	P	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Cobalt transport protein
CLEDNEIB_01557	1.85e-316	-	-	-	S	ko:K16786,ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
CLEDNEIB_01558	1e-220	-	-	-	K	-	-	-	helix_turn_helix, arabinose operon control protein
CLEDNEIB_01559	1.8e-53	-	-	-	L	ko:K07497	-	ko00000	hmm pf00665
CLEDNEIB_01560	6.33e-46	-	-	-	L	ko:K07497	-	ko00000	hmm pf00665
CLEDNEIB_01561	5.35e-74	-	-	-	L	ko:K07497	-	ko00000	hmm pf00665
CLEDNEIB_01562	1.68e-147	-	-	-	L	-	-	-	Helix-turn-helix domain
CLEDNEIB_01563	5.49e-206	htpX	-	-	O	ko:K03799	-	ko00000,ko00002,ko01000,ko01002	Belongs to the peptidase M48B family
CLEDNEIB_01564	1.43e-125	lemA	-	-	S	ko:K03744	-	ko00000	LemA family
CLEDNEIB_01565	3.08e-245	ysdE	-	-	P	-	-	-	Citrate transporter
CLEDNEIB_01566	1.8e-91	-	-	-	S	-	-	-	Iron-sulphur cluster biosynthesis
CLEDNEIB_01567	2.48e-84	glpQ	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	Membrane domain of glycerophosphoryl diester phosphodiesterase
CLEDNEIB_01568	1.21e-299	glpQ	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	Membrane domain of glycerophosphoryl diester phosphodiesterase
CLEDNEIB_01569	9.69e-25	-	-	-	-	-	-	-	-
CLEDNEIB_01570	4.03e-157	yfbR	-	-	S	ko:K07023	-	ko00000	HD containing hydrolase-like enzyme
CLEDNEIB_01571	2.79e-206	-	-	-	L	-	-	-	HNH nucleases
CLEDNEIB_01572	7.41e-176	glnQ	-	-	E	ko:K17076	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
CLEDNEIB_01573	0.0	XK27_05795	-	-	P	ko:K17073,ko:K17074	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
CLEDNEIB_01574	1.71e-156	yxlJ	3.2.2.21	-	L	ko:K03652	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Belongs to the DNA glycosylase MPG family
CLEDNEIB_01575	6.81e-83	yeaO	-	-	S	-	-	-	Protein of unknown function, DUF488
CLEDNEIB_01576	4.26e-160	terC	-	-	P	-	-	-	Integral membrane protein TerC family
CLEDNEIB_01577	1.71e-119	adaB	2.1.1.63	-	L	ko:K00567,ko:K10778,ko:K13531	-	ko00000,ko01000,ko03000,ko03400	6-O-methylguanine DNA methyltransferase, DNA binding domain
CLEDNEIB_01578	1.14e-166	cobB	-	-	K	ko:K12410	-	ko00000,ko01000	SIR2 family
CLEDNEIB_01579	1.14e-111	-	-	-	-	-	-	-	-
CLEDNEIB_01580	0.0	cls	-	-	I	ko:K06131	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CLEDNEIB_01581	3.27e-228	-	-	-	S	-	-	-	Alpha/beta hydrolase of unknown function (DUF915)
CLEDNEIB_01582	4.17e-187	rnhA	3.1.26.4	-	L	ko:K03469	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
CLEDNEIB_01583	2.84e-184	-	-	-	S	-	-	-	Protein of unknown function (DUF1002)
CLEDNEIB_01584	3.74e-204	epsV	-	-	S	-	-	-	glycosyl transferase family 2
CLEDNEIB_01585	1.07e-163	-	-	-	S	-	-	-	Alpha/beta hydrolase family
CLEDNEIB_01586	5.93e-149	-	-	-	GM	-	-	-	NmrA-like family
CLEDNEIB_01587	6.35e-73	-	-	-	-	-	-	-	-
CLEDNEIB_01588	8.37e-232	prs2	2.7.6.1	-	F	ko:K00948	ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
CLEDNEIB_01589	4.46e-156	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
CLEDNEIB_01590	4.16e-173	-	-	-	-	-	-	-	-
CLEDNEIB_01591	0.0	glnPH2	-	-	P	ko:K02029,ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter permease
CLEDNEIB_01592	3.68e-173	glnQ	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
CLEDNEIB_01593	2.69e-295	-	-	-	S	-	-	-	Cysteine-rich secretory protein family
CLEDNEIB_01594	7.25e-265	ddl	6.3.2.4	-	F	ko:K01921	ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Belongs to the D-alanine--D-alanine ligase family
CLEDNEIB_01595	6.11e-152	-	-	-	-	-	-	-	-
CLEDNEIB_01596	2.2e-254	yibE	-	-	S	-	-	-	overlaps another CDS with the same product name
CLEDNEIB_01597	1.35e-167	yibF	-	-	S	-	-	-	overlaps another CDS with the same product name
CLEDNEIB_01598	4.03e-200	-	-	-	I	-	-	-	alpha/beta hydrolase fold
CLEDNEIB_01599	0.0	-	-	-	G	-	-	-	Belongs to the glycosyl hydrolase 31 family
CLEDNEIB_01600	8.67e-111	ntd	2.4.2.6	-	F	ko:K08728	ko00240,map00240	ko00000,ko00001,ko01000	Nucleoside
CLEDNEIB_01601	2.55e-111	-	2.7.1.200, 2.7.1.204	-	G	ko:K02773,ko:K20112	ko00052,ko01100,ko02060,map00052,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
CLEDNEIB_01602	8.38e-190	-	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Tyrosine phosphatase family
CLEDNEIB_01603	1.6e-113	usp5	-	-	T	-	-	-	universal stress protein
CLEDNEIB_01605	1.53e-198	phnD	-	-	P	ko:K02044	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Phosphonate ABC transporter
CLEDNEIB_01606	2.12e-178	phnC	3.6.3.28	-	P	ko:K02041	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
CLEDNEIB_01607	3.54e-165	phnB	-	-	P	ko:K02042	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
CLEDNEIB_01608	4.13e-187	-	-	-	P	ko:K02042	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
CLEDNEIB_01609	1.39e-60	aspD	4.1.1.12	-	E	ko:K09758	ko00250,ko00270,ko01100,ko01230,map00250,map00270,map01100,map01230	ko00000,ko00001,ko01000	Aminotransferase class I and II
CLEDNEIB_01610	0.0	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	FtsX-like permease family
CLEDNEIB_01611	4.8e-171	cysA	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
CLEDNEIB_01612	7e-304	-	-	-	S	-	-	-	response to antibiotic
CLEDNEIB_01613	6.15e-161	-	-	-	-	-	-	-	-
CLEDNEIB_01614	2.4e-146	pacL3	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	P-type ATPase
CLEDNEIB_01615	5.23e-31	pacL3	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	P-type ATPase
CLEDNEIB_01616	3.21e-27	-	-	-	-	-	-	-	-
CLEDNEIB_01617	7.24e-22	-	-	-	-	-	-	-	-
CLEDNEIB_01618	5.52e-240	ansA	3.5.1.1	-	EJ	ko:K01424	ko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110	ko00000,ko00001,ko01000	L-asparaginase, type I
CLEDNEIB_01619	1.04e-169	-	-	-	K	ko:K03481	-	ko00000,ko03000	Helix-turn-helix domain, rpiR family
CLEDNEIB_01620	0.0	malH	3.2.1.122	GH4	G	ko:K01232	ko00500,map00500	ko00000,ko00001,ko01000	Family 4 glycosyl hydrolase C-terminal domain
CLEDNEIB_01621	2.06e-52	-	-	-	-	-	-	-	-
CLEDNEIB_01622	8.26e-60	-	-	-	-	-	-	-	-
CLEDNEIB_01623	1.68e-121	-	-	-	-	-	-	-	-
CLEDNEIB_01624	8.65e-52	-	-	-	K	ko:K06977	-	ko00000	acetyltransferase
CLEDNEIB_01625	3.45e-187	-	-	-	V	-	-	-	Beta-lactamase
CLEDNEIB_01626	2.66e-57	-	-	-	K	ko:K21903	-	ko00000,ko03000	helix_turn_helix, Arsenical Resistance Operon Repressor
CLEDNEIB_01627	1.8e-202	-	-	-	P	ko:K02077	-	ko00000,ko00002,ko02000	Belongs to the bacterial solute-binding protein 9 family
CLEDNEIB_01628	1.63e-152	adcC	-	-	P	ko:K02074,ko:K09817,ko:K11710	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter
CLEDNEIB_01629	9.17e-172	znuB	-	-	U	ko:K02075,ko:K09816	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC 3 transport family
CLEDNEIB_01630	7.72e-297	tcyP	-	-	U	ko:K06956	-	ko00000	Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
CLEDNEIB_01631	1.44e-115	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
CLEDNEIB_01632	7.1e-312	ade	3.5.4.2	-	F	ko:K01486	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000	Adenine deaminase C-terminal domain
CLEDNEIB_01633	4.27e-189	-	-	-	P	ko:K02055	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter
CLEDNEIB_01634	5.74e-170	potA11	3.6.3.30	-	P	ko:K02010,ko:K02052	ko02010,ko02024,map02010,map02024	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
CLEDNEIB_01635	1.29e-141	potC3	-	-	E	ko:K02053	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
CLEDNEIB_01636	5.08e-129	-	-	-	E	ko:K02054	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
CLEDNEIB_01637	1.88e-43	lctP	-	-	C	ko:K03303	-	ko00000,ko02000	L-lactate permease
CLEDNEIB_01638	8.58e-112	lctP	-	-	C	ko:K03303	-	ko00000,ko02000	L-lactate permease
CLEDNEIB_01639	5.6e-65	lctP	-	-	C	ko:K03303	-	ko00000,ko02000	L-lactate permease
CLEDNEIB_01640	2.66e-57	-	-	-	S	-	-	-	Enterocin A Immunity
CLEDNEIB_01641	0.0	helD	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	DNA helicase
CLEDNEIB_01642	6.36e-161	XK27_08875	-	-	O	-	-	-	PFAM peptidase M10A and M12B, matrixin and adamalysin
CLEDNEIB_01643	4.36e-162	gpm2	-	-	G	-	-	-	Phosphoglycerate mutase family
CLEDNEIB_01644	6.95e-125	racD	5.1.1.13	-	M	ko:K01779	ko00250,ko01054,map00250,map01054	ko00000,ko00001,ko01000	Belongs to the aspartate glutamate racemases family
CLEDNEIB_01645	5.85e-97	-	-	-	P	ko:K07085	-	ko00000	Predicted Permease Membrane Region
CLEDNEIB_01646	8.72e-161	-	-	-	P	ko:K07085	-	ko00000	Predicted Permease Membrane Region
CLEDNEIB_01647	3.88e-188	aspD	4.1.1.12	-	E	ko:K09758	ko00250,ko00270,ko01100,ko01230,map00250,map00270,map01100,map01230	ko00000,ko00001,ko01000	Aminotransferase
CLEDNEIB_01648	1.06e-116	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
CLEDNEIB_01650	3.46e-57	yhxD	-	-	IQ	-	-	-	Enoyl-(Acyl carrier protein) reductase
CLEDNEIB_01651	1.14e-23	-	-	-	-	-	-	-	-
CLEDNEIB_01652	3.42e-41	-	-	-	S	-	-	-	Transglycosylase associated protein
CLEDNEIB_01653	6.49e-110	asp1	-	-	S	-	-	-	Asp23 family, cell envelope-related function
CLEDNEIB_01654	2.51e-31	-	-	-	S	-	-	-	Small integral membrane protein (DUF2273)
CLEDNEIB_01655	1.31e-121	-	-	-	-	-	-	-	-
CLEDNEIB_01656	5.73e-120	-	-	-	S	-	-	-	VanZ like family
CLEDNEIB_01657	3.98e-171	yebC	-	-	K	-	-	-	Transcriptional regulatory protein
CLEDNEIB_01658	1.33e-226	comGA	-	-	NU	ko:K02243	-	ko00000,ko00002,ko02044	Type II IV secretion system protein
CLEDNEIB_01659	6.49e-223	comGB	-	-	NU	ko:K02244	-	ko00000,ko00002,ko02044	type II secretion system
CLEDNEIB_01660	5.06e-65	comGC	-	-	U	ko:K02245	-	ko00000,ko00002,ko02044	competence protein ComGC
CLEDNEIB_01661	2.04e-95	-	-	-	-	ko:K02246	-	ko00000,ko00002,ko02044	-
CLEDNEIB_01662	1.18e-55	-	-	-	-	-	-	-	-
CLEDNEIB_01663	5.97e-106	-	-	-	U	ko:K02248	-	ko00000,ko00002,ko02044	Putative Competence protein ComGF
CLEDNEIB_01664	1.46e-239	ytxK	2.1.1.72	-	L	ko:K00571	-	ko00000,ko01000,ko02048	N-6 DNA Methylase
CLEDNEIB_01665	3.19e-283	ackA	2.7.2.1	-	F	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
CLEDNEIB_01667	1.38e-51	-	-	-	M	-	-	-	Protein of unknown function (DUF3737)
CLEDNEIB_01668	5.04e-48	-	-	-	M	-	-	-	Protein of unknown function (DUF3737)
CLEDNEIB_01669	4.03e-286	patB	4.4.1.8	-	E	ko:K14155	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko01000,ko01007	Aminotransferase, class I
CLEDNEIB_01670	3.23e-221	manA	5.3.1.8	-	G	ko:K01809	ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	mannose-6-phosphate isomerase
CLEDNEIB_01671	8.14e-80	-	-	-	S	-	-	-	SdpI/YhfL protein family
CLEDNEIB_01672	4.46e-167	-	-	-	K	-	-	-	Transcriptional regulatory protein, C terminal
CLEDNEIB_01673	0.0	yclK	-	-	T	-	-	-	Histidine kinase
CLEDNEIB_01674	7.8e-99	bioY	-	-	S	ko:K03523	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	BioY family
CLEDNEIB_01675	2.25e-241	birA	6.3.4.15	-	H	ko:K03524	ko00780,ko01100,map00780,map01100	ko00000,ko00001,ko01000,ko03000	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
CLEDNEIB_01676	8.96e-173	fabI	1.3.1.10, 1.3.1.9	-	I	ko:K00208	ko00061,ko00333,ko00780,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Enoyl- acyl-carrier-protein reductase NADH
CLEDNEIB_01677	2.6e-183	accA	2.1.3.15, 6.4.1.2	-	I	ko:K01962	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002,ko01000	alpha subunit
CLEDNEIB_01678	5.09e-202	accD	2.1.3.15, 6.4.1.2	-	I	ko:K01963	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002,ko01000	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
CLEDNEIB_01679	0.0	accC	6.3.4.14, 6.4.1.2	-	I	ko:K01961	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002,ko01000	Acetyl-CoA carboxylase biotin carboxylase subunit
CLEDNEIB_01680	6.67e-94	fabZ2	4.2.1.59	-	I	ko:K02372	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	FabA-like domain
CLEDNEIB_01681	5.23e-102	accB	-	-	I	ko:K02160	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002	first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
CLEDNEIB_01682	8.97e-293	fabF	2.3.1.179	-	I	ko:K09458	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
CLEDNEIB_01683	1.8e-163	fabG	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	reductase
CLEDNEIB_01684	1.66e-215	fabD	2.3.1.39	-	I	ko:K00645,ko:K15327,ko:K15329	ko00061,ko00333,ko01100,ko01130,ko01212,map00061,map00333,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004,ko01008	Malonyl CoA-acyl carrier protein transacylase
CLEDNEIB_01685	1.53e-47	acpP	-	-	IQ	ko:K02078	-	ko00000,ko00001	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CLEDNEIB_01686	2.13e-229	fabH	2.3.1.180	-	I	ko:K00648	ko00061,ko01100,ko01212,map00061,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
CLEDNEIB_01687	2.06e-103	-	-	-	K	-	-	-	Transcriptional regulator
CLEDNEIB_01688	5.77e-102	fabZ	4.2.1.59	-	I	ko:K02372	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
CLEDNEIB_01689	2.53e-31	pdp	2.4.2.2	-	F	ko:K00756	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	pyrimidine-nucleoside phosphorylase
CLEDNEIB_01690	2.42e-168	pdp	2.4.2.2	-	F	ko:K00756	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	pyrimidine-nucleoside phosphorylase
CLEDNEIB_01691	2.15e-39	-	-	-	S	-	-	-	Transglycosylase associated protein
CLEDNEIB_01692	1.27e-46	-	-	-	-	-	-	-	-
CLEDNEIB_01693	0.0	nisT	-	-	V	ko:K06147,ko:K20485	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko02000	ABC transporter
CLEDNEIB_01694	1.29e-196	-	3.1.3.102, 3.1.3.104	-	S	ko:K20861	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	haloacid dehalogenase-like hydrolase
CLEDNEIB_01695	0.0	fusA1	-	-	J	-	-	-	elongation factor G
CLEDNEIB_01696	8.57e-211	yvgN	-	-	C	-	-	-	Aldo keto reductase
CLEDNEIB_01697	2.65e-269	-	-	-	S	-	-	-	SLAP domain
CLEDNEIB_01698	6.05e-19	-	-	-	S	-	-	-	Bacteriocin helveticin-J
CLEDNEIB_01699	4e-172	ysaA	3.1.3.5, 3.8.1.2	-	S	ko:K01560,ko:K07025,ko:K08723	ko00230,ko00240,ko00361,ko00625,ko00760,ko01100,ko01110,ko01120,map00230,map00240,map00361,map00625,map00760,map01100,map01110,map01120	ko00000,ko00001,ko01000	Haloacid dehalogenase-like hydrolase
CLEDNEIB_01700	1.05e-226	ABC-SBP	-	-	S	ko:K01989	-	ko00000,ko00002,ko02000	ABC transporter
CLEDNEIB_01701	1.17e-168	XK27_08840	-	-	U	ko:K05832	-	ko00000,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
CLEDNEIB_01702	4.47e-178	XK27_08845	-	-	S	ko:K05833	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
CLEDNEIB_01703	2.4e-68	-	-	-	-	-	-	-	-
CLEDNEIB_01704	4.97e-24	-	-	-	-	-	-	-	-
CLEDNEIB_01705	1.96e-192	-	-	-	K	ko:K09705	-	ko00000	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
CLEDNEIB_01706	5.09e-28	-	-	-	K	-	-	-	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
CLEDNEIB_01707	8.53e-136	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
CLEDNEIB_01708	0.0	-	-	-	V	-	-	-	Restriction endonuclease
CLEDNEIB_01709	8.92e-317	-	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
CLEDNEIB_01710	5.17e-307	-	-	-	S	-	-	-	LPXTG cell wall anchor motif
CLEDNEIB_01711	9.87e-193	-	-	-	S	-	-	-	Putative ABC-transporter type IV
CLEDNEIB_01712	1.49e-127	-	-	-	S	-	-	-	Cob(I)alamin adenosyltransferase
CLEDNEIB_01713	1.23e-111	-	-	-	S	ko:K16927	-	ko00000,ko00002,ko02000	ECF transporter, substrate-specific component
CLEDNEIB_01714	4.63e-78	-	-	-	S	-	-	-	Domain of unknown function (DUF4430)
CLEDNEIB_01715	0.0	rtpR	1.17.4.2	-	F	ko:K00527	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000	ribonucleoside-triphosphate reductase activity
CLEDNEIB_01716	2.43e-223	ydbI	-	-	K	-	-	-	AI-2E family transporter
CLEDNEIB_01717	3.93e-134	-	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase
CLEDNEIB_01718	2.25e-16	-	-	-	S	-	-	-	MazG-like family
CLEDNEIB_01719	9.76e-36	-	-	-	S	-	-	-	MazG-like family
CLEDNEIB_01720	2.19e-73	-	-	-	-	-	-	-	-
CLEDNEIB_01721	7.55e-58	-	-	-	-	ko:K07473	-	ko00000,ko02048	-
CLEDNEIB_01722	1.78e-42	-	-	-	S	-	-	-	Protein of unknown function (DUF3923)
CLEDNEIB_01723	1.23e-67	yjhB	3.6.1.13	-	F	ko:K01515	ko00230,map00230	ko00000,ko00001,ko01000	NUDIX domain
CLEDNEIB_01724	3.73e-206	yxaM	-	-	EGP	-	-	-	Major facilitator Superfamily
CLEDNEIB_01725	2.16e-30	codA	-	-	F	-	-	-	Cytidine and deoxycytidylate deaminase zinc-binding region
CLEDNEIB_01726	3.73e-44	cdd	2.4.2.4, 3.5.4.5	-	F	ko:K00758,ko:K01489	ko00240,ko00983,ko01100,ko05219,map00240,map00983,map01100,map05219	ko00000,ko00001,ko01000	cytidine deaminase activity
CLEDNEIB_01727	2.64e-119	-	-	-	S	-	-	-	AAA domain
CLEDNEIB_01728	2.92e-192	-	-	-	M	-	-	-	Phosphotransferase enzyme family
CLEDNEIB_01729	2.14e-185	-	-	-	F	-	-	-	Phosphorylase superfamily
CLEDNEIB_01730	5.9e-183	-	-	-	F	-	-	-	Phosphorylase superfamily
CLEDNEIB_01731	9.88e-152	-	2.3.1.81	-	V	ko:K00662	-	ko00000,ko01000,ko01504	Aminoglycoside 3-N-acetyltransferase
CLEDNEIB_01732	0.0	pepX	3.4.14.11	-	E	ko:K01281	-	ko00000,ko01000,ko01002	Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
CLEDNEIB_01733	1.17e-79	-	-	-	S	-	-	-	Bacterial PH domain
CLEDNEIB_01734	7.87e-37	-	-	-	-	-	-	-	-
CLEDNEIB_01735	6.33e-87	yusI	1.20.4.1	-	P	ko:K00537	-	ko00000,ko01000	Belongs to the ArsC family
CLEDNEIB_01736	8.67e-228	lipA	-	-	I	-	-	-	Carboxylesterase family
CLEDNEIB_01737	4.63e-15	-	-	-	-	-	-	-	-
CLEDNEIB_01739	6.35e-175	-	-	-	-	-	-	-	-
CLEDNEIB_01740	5.87e-99	M1-431	-	-	S	-	-	-	Protein of unknown function (DUF1706)
CLEDNEIB_01741	3.56e-93	ytwI	-	-	S	-	-	-	Protein of unknown function (DUF441)
CLEDNEIB_01742	4.84e-23	-	-	-	-	-	-	-	-
CLEDNEIB_01743	4.46e-190	cbiQ	-	-	P	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	cobalt transport
CLEDNEIB_01744	0.0	ykoD	-	-	P	ko:K16786,ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
CLEDNEIB_01745	1.22e-121	-	-	-	S	ko:K16924	-	ko00000,ko00002,ko02000	UPF0397 protein
CLEDNEIB_01746	1.64e-86	-	-	-	S	-	-	-	Domain of unknown function DUF1828
CLEDNEIB_01747	4.27e-22	-	-	-	-	-	-	-	-
CLEDNEIB_01748	2.78e-67	-	-	-	-	-	-	-	-
CLEDNEIB_01749	1.43e-222	citR	-	-	K	-	-	-	Putative sugar-binding domain
CLEDNEIB_01750	9.28e-317	-	-	-	S	-	-	-	Putative threonine/serine exporter
CLEDNEIB_01751	1.04e-125	-	-	-	S	ko:K06910	-	ko00000	Phosphatidylethanolamine-binding protein
CLEDNEIB_01752	1.26e-117	-	-	-	-	-	-	-	-
CLEDNEIB_01755	8.23e-249	metE	2.1.1.14	-	E	ko:K00549	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	methionine synthase, vitamin-B12 independent
CLEDNEIB_01756	2.3e-115	luxS	4.4.1.21	-	H	ko:K07173	ko00270,ko01100,ko01230,ko02024,ko02026,ko05111,map00270,map01100,map01230,map02024,map02026,map05111	ko00000,ko00001,ko00002,ko01000	Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
CLEDNEIB_01757	0.0	potE	-	-	E	-	-	-	Amino Acid
CLEDNEIB_01758	3.43e-51	-	-	-	-	-	-	-	-
CLEDNEIB_01759	1.17e-72	-	-	-	-	-	-	-	-
CLEDNEIB_01760	3.97e-109	-	-	-	-	-	-	-	-
CLEDNEIB_01761	3.39e-51	-	-	-	-	-	-	-	-
CLEDNEIB_01762	7.47e-60	-	-	-	-	-	-	-	-
CLEDNEIB_01763	1.01e-160	-	-	-	S	-	-	-	L-ascorbic acid biosynthetic process
CLEDNEIB_01764	3.6e-92	-	-	-	O	-	-	-	OsmC-like protein
CLEDNEIB_01765	2.16e-263	-	-	-	EGP	-	-	-	Major Facilitator Superfamily
CLEDNEIB_01766	2.8e-147	sptS	-	-	T	-	-	-	Histidine kinase
CLEDNEIB_01767	1.37e-62	sptS	-	-	T	-	-	-	Histidine kinase
CLEDNEIB_01768	6.18e-105	dltr	-	-	K	-	-	-	response regulator
CLEDNEIB_01769	4.18e-197	-	3.1.3.102, 3.1.3.104	-	S	ko:K20861	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	hydrolase
CLEDNEIB_01770	8.44e-81	-	2.3.1.81	-	V	ko:K00662	-	ko00000,ko01000,ko01504	Aminoglycoside 3-N-acetyltransferase
CLEDNEIB_01771	1.7e-78	-	2.3.1.81	-	V	ko:K00662	-	ko00000,ko01000,ko01504	Aminoglycoside 3-N-acetyltransferase
CLEDNEIB_01773	1.06e-170	gntR	-	-	K	-	-	-	UbiC transcription regulator-associated domain protein
CLEDNEIB_01774	1.74e-223	rihC	3.2.2.1	-	F	ko:K01239,ko:K01250,ko:K12700	ko00230,ko00760,ko01100,map00230,map00760,map01100	ko00000,ko00001,ko01000	Nucleoside
CLEDNEIB_01775	0.0	kup	-	-	P	ko:K03549	-	ko00000,ko02000	Transport of potassium into the cell
CLEDNEIB_01776	3.83e-163	rpiA	5.3.1.6	-	G	ko:K01807	ko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
CLEDNEIB_01777	8.52e-215	rbsK	2.7.1.15	-	H	ko:K00852	ko00030,map00030	ko00000,ko00001,ko01000	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CLEDNEIB_01778	2.85e-206	-	-	-	C	-	-	-	Domain of unknown function (DUF4931)
CLEDNEIB_01779	4.78e-307	srrA1	-	-	G	ko:K02027,ko:K17244	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding protein
CLEDNEIB_01780	1.77e-72	-	-	-	S	-	-	-	Bacteriocin helveticin-J
CLEDNEIB_01781	9.52e-211	-	-	-	S	-	-	-	SLAP domain
CLEDNEIB_01782	2.96e-167	-	-	-	K	-	-	-	sequence-specific DNA binding
CLEDNEIB_01783	2.71e-192	-	-	-	S	-	-	-	Protein of unknown function (DUF2974)
CLEDNEIB_01784	1.66e-137	glnP	-	-	P	ko:K10040	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
CLEDNEIB_01785	3.66e-139	glnM	-	-	P	ko:K10040	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
CLEDNEIB_01786	5.24e-191	glnH	-	-	ET	ko:K10039	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
CLEDNEIB_01787	8.97e-170	glnQ	-	-	E	ko:K10041	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
CLEDNEIB_01788	1.91e-244	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
CLEDNEIB_01789	1.23e-21	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
CLEDNEIB_01790	7.79e-112	-	-	-	L	ko:K07491	-	ko00000	Transposase IS200 like
CLEDNEIB_01791	3.1e-24	udk	2.7.1.48	-	F	ko:K00876	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	Zeta toxin
CLEDNEIB_01792	1.17e-105	udk	2.7.1.48	-	F	ko:K00876	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	Zeta toxin
CLEDNEIB_01793	6.26e-79	-	-	-	EGP	-	-	-	Major facilitator superfamily
CLEDNEIB_01794	5.28e-118	-	-	-	EGP	-	-	-	Major facilitator superfamily
CLEDNEIB_01795	1.47e-130	ykoE	-	-	S	ko:K16925	-	ko00000,ko00002,ko02000	ABC-type cobalt transport system, permease component
CLEDNEIB_01796	0.0	XK27_09605	-	-	V	ko:K18892	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter transmembrane region
CLEDNEIB_01797	0.0	XK27_09600	-	-	V	ko:K06147,ko:K18891	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter, ATP-binding protein
CLEDNEIB_01798	1.03e-103	-	-	-	K	-	-	-	Transcriptional regulator, MarR family
CLEDNEIB_01799	1.75e-189	peb1A	-	-	ET	ko:K10039	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
CLEDNEIB_01800	6.43e-167	-	-	-	F	-	-	-	glutamine amidotransferase
CLEDNEIB_01801	3.05e-190	-	-	-	-	-	-	-	-
CLEDNEIB_01802	0.0	ykpA	-	-	S	-	-	-	ABC transporter, ATP-binding protein
CLEDNEIB_01803	2.17e-266	pepA	-	-	E	-	-	-	M42 glutamyl aminopeptidase
CLEDNEIB_01804	1.17e-40	pmrA	-	-	EGP	ko:K08161	-	ko00000,ko02000	MFS_1 like family
CLEDNEIB_01805	8.93e-213	pmrA	-	-	EGP	ko:K08161	-	ko00000,ko02000	MFS_1 like family
CLEDNEIB_01806	0.0	qacA	-	-	EGP	-	-	-	Major Facilitator
CLEDNEIB_01807	4.47e-115	pyrR	2.4.2.9	-	F	ko:K02825	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000,ko03000	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
CLEDNEIB_01808	8.47e-301	pyrP	-	-	F	ko:K02824	-	ko00000,ko02000	Permease
CLEDNEIB_01809	1.19e-197	-	1.1.1.346	-	S	ko:K06221	-	ko00000,ko01000	reductase
CLEDNEIB_01810	5.59e-39	-	2.7.1.191	-	G	ko:K02793,ko:K02794	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphoenolpyruvate-dependent sugar phosphotransferase system
CLEDNEIB_01811	1.01e-99	-	2.7.1.191	-	G	ko:K02793,ko:K02794	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system sorbose subfamily IIB component
CLEDNEIB_01812	1.1e-93	-	-	-	G	ko:K02795	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	PTS system sorbose-specific iic component
CLEDNEIB_01813	3.8e-60	-	-	-	G	ko:K02795	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	PTS system sorbose-specific iic component
CLEDNEIB_01814	3.24e-185	-	-	-	G	ko:K02796	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	PTS system mannose/fructose/sorbose family IID component
CLEDNEIB_01815	1.76e-109	-	-	-	K	-	-	-	acetyltransferase
CLEDNEIB_01816	7.9e-191	-	4.2.1.53	-	S	ko:K10254	-	ko00000,ko01000	MCRA family
CLEDNEIB_01817	1.67e-208	-	4.2.1.53	-	S	ko:K10254	-	ko00000,ko01000	Myosin-crossreactive antigen
CLEDNEIB_01818	2.16e-119	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
CLEDNEIB_01819	6.13e-315	qacA	-	-	EGP	-	-	-	Major Facilitator
CLEDNEIB_01824	1.04e-124	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
CLEDNEIB_01825	6.69e-81	-	-	-	-	-	-	-	-
CLEDNEIB_01826	6.67e-144	-	-	-	L	-	-	-	helicase activity
CLEDNEIB_01828	1.11e-70	-	-	-	-	-	-	-	-
CLEDNEIB_01829	3.81e-309	polYB	2.7.7.7	-	L	ko:K02346,ko:K03502	-	ko00000,ko01000,ko03400	Belongs to the DNA polymerase type-Y family
CLEDNEIB_01830	1.21e-112	-	1.2.3.3	-	EH	ko:K00158	ko00620,ko01100,map00620,map01100	ko00000,ko00001,ko01000	Belongs to the TPP enzyme family
CLEDNEIB_01831	3.66e-253	-	1.2.3.3	-	EH	ko:K00158	ko00620,ko01100,map00620,map01100	ko00000,ko00001,ko01000	Belongs to the TPP enzyme family
CLEDNEIB_01832	2.05e-45	sstT	-	-	U	ko:K07862	-	ko00000,ko02000	Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
CLEDNEIB_01833	0.0	treB	-	-	G	ko:K02755,ko:K02756,ko:K02757	ko02060,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
CLEDNEIB_01834	0.0	treC	3.2.1.93	GH13	G	ko:K01226	ko00500,map00500	ko00000,ko00001,ko01000	Alpha amylase, catalytic domain protein
CLEDNEIB_01835	1.82e-165	treR	-	-	K	ko:K03486	-	ko00000,ko03000	UTRA
CLEDNEIB_01837	5.74e-74	-	-	-	S	-	-	-	Putative transposase
CLEDNEIB_01838	1.73e-105	-	-	-	S	-	-	-	Putative transposase
CLEDNEIB_01839	3.77e-139	-	-	-	L	-	-	-	Integrase
CLEDNEIB_01840	5.12e-56	-	-	-	S	ko:K07473	-	ko00000,ko02048	RelB antitoxin
CLEDNEIB_01841	4.68e-67	-	-	-	S	ko:K19157	-	ko00000,ko01000,ko02048	Bacterial toxin of type II toxin-antitoxin system, YafQ
CLEDNEIB_01844	6e-136	-	-	-	L	-	-	-	Integrase
CLEDNEIB_01845	3.16e-59	-	-	-	T	ko:K07172	-	ko00000,ko02048	Antidote-toxin recognition MazE, bacterial antitoxin
CLEDNEIB_01846	3.2e-76	-	-	-	T	ko:K07171	-	ko00000,ko01000,ko02048	PemK-like, MazF-like toxin of type II toxin-antitoxin system
CLEDNEIB_01847	7.1e-81	-	-	-	S	-	-	-	Protein of unknown function (DUF2992)
CLEDNEIB_01848	8.55e-42	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
CLEDNEIB_01849	2.68e-177	-	-	-	K	-	-	-	Helix-turn-helix domain
CLEDNEIB_01850	6.44e-59	-	-	-	-	-	-	-	-
CLEDNEIB_01851	0.0	-	-	-	V	-	-	-	ABC transporter transmembrane region
CLEDNEIB_01852	2.91e-229	pepR	3.4.11.5	-	E	ko:K01259	ko00330,map00330	ko00000,ko00001,ko01000,ko01002	Releases the N-terminal proline from various substrates
CLEDNEIB_01853	2.42e-238	add	3.5.4.2, 3.5.4.4	-	F	ko:K01488,ko:K02029,ko:K21053	ko00230,ko01100,ko05340,map00230,map01100,map05340	ko00000,ko00001,ko00002,ko01000,ko02000	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
CLEDNEIB_01854	2.65e-123	-	-	-	F	-	-	-	Nucleoside 2-deoxyribosyltransferase
CLEDNEIB_01855	5.86e-106	-	-	-	S	-	-	-	Peptidase propeptide and YPEB domain
CLEDNEIB_01856	4.17e-111	XK27_03150	2.3.1.57	-	K	ko:K22441	-	ko00000,ko01000	Acetyltransferase (GNAT) domain
CLEDNEIB_01857	5.44e-88	yybA	-	-	K	-	-	-	Transcriptional regulator
CLEDNEIB_01858	1.82e-18	-	-	-	S	-	-	-	Peptidase propeptide and YPEB domain
CLEDNEIB_01859	1.81e-88	-	-	-	S	-	-	-	Peptidase propeptide and YPEB domain
CLEDNEIB_01860	7.39e-311	-	-	-	G	ko:K02027	-	ko00000,ko00002,ko02000	Bacterial extracellular solute-binding protein
CLEDNEIB_01861	5.59e-134	efp	-	-	J	ko:K02356	-	ko00000,ko03012	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
CLEDNEIB_01862	9.2e-218	coaA	2.7.1.33	-	F	ko:K00867	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Pantothenic acid kinase
CLEDNEIB_01863	9.7e-133	-	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase
CLEDNEIB_01864	6.23e-244	galE	5.1.3.2	-	M	ko:K01784	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the NAD(P)-dependent epimerase dehydratase family
CLEDNEIB_01865	4.53e-240	lacM	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	beta-galactosidase
CLEDNEIB_01866	0.0	lacL	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 2 family
CLEDNEIB_01867	1.25e-241	lacR	-	-	K	ko:K02529	-	ko00000,ko03000	Transcriptional regulator
CLEDNEIB_01868	1.81e-29	lacS	-	-	G	ko:K11104,ko:K16209	-	ko00000,ko02000	Transporter
CLEDNEIB_01869	2.5e-59	lacS	-	-	G	ko:K11104,ko:K16209	-	ko00000,ko02000	Transporter
CLEDNEIB_01870	1.32e-184	lacS	-	-	G	ko:K11104,ko:K16209	-	ko00000,ko02000	Transporter
CLEDNEIB_01871	0.0	lacS	-	-	G	ko:K11104,ko:K16209	-	ko00000,ko02000	Transporter
CLEDNEIB_01872	6.04e-113	lacZ	3.2.1.23	-	G	ko:K12308	ko00052,map00052	ko00000,ko00001,ko01000	-beta-galactosidase
CLEDNEIB_01873	2.71e-53	lacZ	3.2.1.23	-	G	ko:K12308	ko00052,map00052	ko00000,ko00001,ko01000	-beta-galactosidase
CLEDNEIB_01874	4.44e-238	-	-	-	S	-	-	-	Putative peptidoglycan binding domain
CLEDNEIB_01875	1.58e-33	-	-	-	-	-	-	-	-
CLEDNEIB_01876	0.0	dtpT	-	-	U	ko:K03305	-	ko00000	amino acid peptide transporter
CLEDNEIB_01877	0.0	pepN	3.4.11.2	-	E	ko:K01256	ko00480,ko01100,map00480,map01100	ko00000,ko00001,ko01000,ko01002	aminopeptidase
CLEDNEIB_01879	2.79e-77	lysM	-	-	M	-	-	-	LysM domain
CLEDNEIB_01880	8.23e-222	-	-	-	-	-	-	-	-
CLEDNEIB_01881	5.9e-289	mdtG2	-	-	EGP	ko:K08161	-	ko00000,ko02000	Transporter, major facilitator family protein
CLEDNEIB_01882	4.74e-96	-	-	-	L	-	-	-	PFAM transposase, IS4 family protein
CLEDNEIB_01883	1.17e-29	repA	-	-	S	-	-	-	Replication initiator protein A
CLEDNEIB_01884	2.92e-61	-	-	-	S	-	-	-	Domain of unknown function (DUF4160)
CLEDNEIB_01885	1.08e-52	-	-	-	O	-	-	-	Matrixin
CLEDNEIB_01886	1.52e-268	eriC	-	-	P	ko:K03281	-	ko00000	chloride
CLEDNEIB_01887	0.0	yoaB	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	P-type ATPase
CLEDNEIB_01888	8.77e-213	yufQ	-	-	S	ko:K02057	-	ko00000,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
CLEDNEIB_01889	2.99e-242	mglC	-	-	S	ko:K02057	-	ko00000,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
CLEDNEIB_01890	3.21e-312	mglA	3.6.3.17	-	S	ko:K02056,ko:K06400	-	ko00000,ko00002,ko01000,ko02000	ABC transporter
CLEDNEIB_01891	6.81e-234	tcsA	-	-	S	ko:K02058,ko:K07335	-	ko00000,ko00002,ko02000	ABC transporter substrate-binding protein PnrA-like
CLEDNEIB_01892	2.95e-23	-	2.4.2.6	-	F	ko:K08728	ko00240,map00240	ko00000,ko00001,ko01000	Nucleoside 2-deoxyribosyltransferase
CLEDNEIB_01893	0.0	FbpA	-	-	K	-	-	-	Fibronectin-binding protein
CLEDNEIB_01894	5.69e-86	-	-	-	-	-	-	-	-
CLEDNEIB_01895	3.06e-205	-	-	-	S	-	-	-	EDD domain protein, DegV family
CLEDNEIB_01896	5.71e-262	xerS	-	-	L	ko:K03733	-	ko00000,ko03036	Belongs to the 'phage' integrase family
CLEDNEIB_01897	1.19e-91	-	-	-	-	-	-	-	-
CLEDNEIB_01898	2.77e-114	flaR	-	-	F	-	-	-	topology modulation protein
CLEDNEIB_01899	5.51e-140	XK27_00160	-	-	S	-	-	-	Domain of unknown function (DUF5052)
CLEDNEIB_01900	1.1e-69	-	-	-	-	-	-	-	-
CLEDNEIB_01901	5.82e-35	-	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
CLEDNEIB_01902	2.49e-116	-	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
CLEDNEIB_01903	7.24e-30	lysA2	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
CLEDNEIB_01904	6.17e-48	-	-	-	S	-	-	-	Transglycosylase associated protein
CLEDNEIB_01905	4.19e-92	def2	3.5.1.88	-	J	ko:K01462	-	ko00000,ko01000	Removes the formyl group from the N-terminal Met of newly synthesized proteins
CLEDNEIB_01906	2.55e-246	pbpX1	-	-	V	-	-	-	Beta-lactamase
CLEDNEIB_01907	0.0	-	-	-	L	-	-	-	Helicase C-terminal domain protein
CLEDNEIB_01908	0.0	-	-	-	E	ko:K20265	ko02024,map02024	ko00000,ko00001,ko02000	amino acid
CLEDNEIB_01909	1.25e-204	xth	3.1.11.2	-	L	ko:K01142	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	exodeoxyribonuclease III
CLEDNEIB_01910	3.94e-117	-	-	-	G	-	-	-	Phosphotransferase enzyme family
CLEDNEIB_01911	6.82e-85	-	-	-	G	-	-	-	Phosphotransferase enzyme family
CLEDNEIB_01912	7.58e-244	ldhA	1.1.1.28	-	C	ko:K03778,ko:K18347	ko00620,ko01120,ko01502,ko02020,map00620,map01120,map01502,map02020	ko00000,ko00001,ko00002,ko01000,ko01504	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CLEDNEIB_01913	3.62e-73	-	-	-	-	-	-	-	-
CLEDNEIB_01914	2.9e-193	nadC	2.4.2.19	-	H	ko:K00767	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Quinolinate phosphoribosyl transferase, C-terminal domain
CLEDNEIB_01915	2.49e-276	yceI	-	-	EGP	ko:K08369	-	ko00000,ko02000	Major Facilitator
CLEDNEIB_01916	2.75e-91	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
CLEDNEIB_01917	7.93e-289	oxlT	-	-	P	ko:K08177	-	ko00000,ko02000	Major Facilitator Superfamily
CLEDNEIB_01918	7.81e-94	-	-	-	L	ko:K07483,ko:K07497	-	ko00000	Helix-turn-helix domain
CLEDNEIB_01919	7.22e-133	-	-	-	L	-	-	-	HTH-like domain
CLEDNEIB_01920	0.0	uvrA2	-	-	L	-	-	-	ABC transporter
CLEDNEIB_01921	1.27e-14	tnpA1	-	-	L	-	-	-	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
CLEDNEIB_01929	1.19e-279	-	2.4.1.337	GT4	M	ko:K19002	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000,ko01003	Glycosyl transferase 4-like domain
CLEDNEIB_01930	1.75e-254	cpoA	2.4.1.208	GT4	M	ko:K13677,ko:K13678	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000,ko01003	Glycosyltransferase, group 1 family protein
CLEDNEIB_01931	4.59e-226	mprF	-	-	S	ko:K07027	-	ko00000,ko02000	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
CLEDNEIB_01932	0.0	ltaS	2.7.8.20	-	M	ko:K19005	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
CLEDNEIB_01933	1.3e-40	secG	-	-	U	ko:K03075	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Preprotein translocase
CLEDNEIB_01934	0.0	rnr	-	-	J	ko:K12573	ko03018,map03018	ko00000,ko00001,ko01000,ko03016,ko03019	3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
CLEDNEIB_01935	4.52e-101	smpB	-	-	J	ko:K03664	-	ko00000	the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
CLEDNEIB_01936	0.0	XK27_00340	3.1.3.5	-	F	ko:K01081	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the 5'-nucleotidase family
CLEDNEIB_01937	4.52e-62	-	-	-	L	-	-	-	PFAM transposase, IS4 family protein
CLEDNEIB_01938	6.05e-79	-	-	-	L	-	-	-	PFAM transposase, IS4 family protein
CLEDNEIB_01939	0.0	-	-	-	-	-	-	-	-
CLEDNEIB_01940	0.0	-	-	-	S	-	-	-	PglZ domain
CLEDNEIB_01941	6.5e-67	-	-	-	LO	-	-	-	Belongs to the peptidase S16 family
CLEDNEIB_01942	0.0	-	-	-	LV	-	-	-	Eco57I restriction-modification methylase
CLEDNEIB_01943	8.15e-251	-	-	-	K	-	-	-	RNA-binding protein homologous to eukaryotic snRNP
CLEDNEIB_01944	8.2e-145	-	-	-	S	-	-	-	Domain of unknown function (DUF1788)
CLEDNEIB_01945	1.92e-135	-	-	-	S	-	-	-	Putative inner membrane protein (DUF1819)
CLEDNEIB_01946	6.3e-273	-	-	-	S	-	-	-	Protein of unknown function DUF262
CLEDNEIB_01947	1.48e-90	-	-	-	-	-	-	-	-
CLEDNEIB_01948	2.41e-68	-	-	-	K	-	-	-	Acetyltransferase (GNAT) family
CLEDNEIB_01949	1.39e-141	fnr	-	-	K	ko:K21562	-	ko00000,ko03000	Transcriptional regulator, Crp Fnr family
CLEDNEIB_01950	3.92e-117	dpsB	-	-	P	-	-	-	Belongs to the Dps family
CLEDNEIB_01951	2.95e-43	-	-	-	C	-	-	-	Heavy-metal-associated domain
CLEDNEIB_01952	0.0	cadA	3.6.3.3, 3.6.3.5	-	P	ko:K01534	-	ko00000,ko01000	E1-E2 ATPase
CLEDNEIB_01953	8.38e-62	mepA	-	-	V	ko:K18908	-	ko00000,ko00002,ko01504,ko02000	MATE efflux family protein
CLEDNEIB_01954	6.85e-26	adh1	1.1.1.1	-	E	ko:K00001	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	alcohol dehydrogenase
CLEDNEIB_01955	0.0	npr	1.11.1.1	-	C	ko:K05910	-	ko00000,ko01000	NADH oxidase
CLEDNEIB_01956	2.4e-89	-	-	-	S	-	-	-	pyridoxamine 5-phosphate
CLEDNEIB_01957	1.54e-218	yobV3	-	-	K	-	-	-	WYL domain
CLEDNEIB_01958	1.7e-64	-	-	-	S	-	-	-	Pyridoxamine 5'-phosphate oxidase
CLEDNEIB_01959	2.93e-44	-	-	-	-	-	-	-	-
CLEDNEIB_01960	1.36e-71	-	-	-	-	-	-	-	-
CLEDNEIB_01961	1.56e-48	-	4.4.1.5	-	E	ko:K01759	ko00620,map00620	ko00000,ko00001,ko01000	lactoylglutathione lyase activity
CLEDNEIB_01962	3.48e-86	-	-	-	S	-	-	-	ASCH domain
CLEDNEIB_01963	1.05e-142	msrA	1.8.4.11, 1.8.4.12	-	O	ko:K07304,ko:K12267	-	ko00000,ko01000	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
CLEDNEIB_01964	7.07e-106	-	-	-	-	-	-	-	-
CLEDNEIB_01965	0.0	-	-	-	-	-	-	-	-
CLEDNEIB_01966	6.33e-176	treC	3.2.1.93	GH13	G	ko:K01226	ko00500,map00500	ko00000,ko00001,ko01000	Alpha amylase, catalytic domain protein
CLEDNEIB_01967	1.16e-102	-	-	-	L	-	-	-	COG3385 FOG Transposase and inactivated derivatives
CLEDNEIB_01968	9.66e-161	-	-	-	V	ko:K01992	-	ko00000,ko00002,ko02000	Transport permease protein
CLEDNEIB_01969	4.39e-160	-	-	-	V	ko:K01992	-	ko00000,ko00002,ko02000	Transport permease protein
CLEDNEIB_01970	3.38e-173	natA	3.6.3.7	-	CP	ko:K01990,ko:K09697	ko02010,ko02020,map02010,map02020	ko00000,ko00001,ko00002,ko01000,ko02000	ATPases associated with a variety of cellular activities
CLEDNEIB_01971	6.41e-38	-	-	-	-	-	-	-	-
CLEDNEIB_01972	7.72e-48	-	-	-	-	-	-	-	-
CLEDNEIB_01973	1.46e-255	-	-	-	V	ko:K06147,ko:K06148	-	ko00000,ko02000	ABC transporter transmembrane region
CLEDNEIB_01974	3.93e-95	-	-	-	V	ko:K06147,ko:K06148	-	ko00000,ko02000	ABC transporter transmembrane region
CLEDNEIB_01975	4.85e-46	-	-	-	KLT	-	-	-	serine threonine protein kinase
CLEDNEIB_01976	0.0	-	-	-	V	-	-	-	ABC transporter transmembrane region
CLEDNEIB_01977	5.81e-106	-	-	-	S	-	-	-	Threonine/Serine exporter, ThrE
CLEDNEIB_01978	1.38e-178	-	-	-	S	-	-	-	Putative threonine/serine exporter
CLEDNEIB_01979	0.0	-	-	-	S	-	-	-	ABC transporter
CLEDNEIB_01980	1.36e-73	-	-	-	-	-	-	-	-
CLEDNEIB_01981	3.26e-128	rimL	-	-	J	ko:K03817	-	ko00000,ko01000,ko03009	Acetyltransferase (GNAT) domain
CLEDNEIB_01982	1.08e-148	-	-	-	S	ko:K07150	-	ko00000	Protein of unknown function (DUF554)
CLEDNEIB_01983	2.18e-286	brpA	-	-	K	-	-	-	Cell envelope-like function transcriptional attenuator common domain protein
CLEDNEIB_01984	0.0	pepF	-	-	E	ko:K08602	-	ko00000,ko01000,ko01002	oligoendopeptidase F
CLEDNEIB_01985	1.45e-54	-	-	-	S	-	-	-	Fic/DOC family
CLEDNEIB_01986	1.97e-18	-	-	-	-	-	-	-	-
CLEDNEIB_01987	2.54e-30	-	-	-	K	ko:K07726	-	ko00000,ko03000	Helix-turn-helix XRE-family like proteins
CLEDNEIB_01988	1.78e-33	-	-	-	S	-	-	-	RelE toxin of RelE / RelB toxin-antitoxin system
CLEDNEIB_01990	1.7e-206	-	5.2.1.8	-	M	ko:K07533	-	ko00000,ko01000,ko03110	Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
CLEDNEIB_01992	1.33e-140	-	-	-	S	-	-	-	Uncharacterised protein family (UPF0236)
CLEDNEIB_01993	4.39e-177	yxeH	-	-	S	-	-	-	hydrolase
CLEDNEIB_01994	2.66e-48	-	-	-	S	-	-	-	Enterocin A Immunity
CLEDNEIB_01995	4.62e-284	psd	4.1.1.65	-	I	ko:K01613	ko00564,ko01100,ko01110,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Belongs to the phosphatidylserine decarboxylase family
CLEDNEIB_01996	7.41e-65	pspC	-	-	KT	ko:K03973	-	ko00000,ko02048,ko03000	PspC domain
CLEDNEIB_01998	1.74e-308	dacA	3.4.16.4	-	M	ko:K07258	ko00550,ko01100,map00550,map01100	ko00000,ko00001,ko01000,ko01002,ko01011	Belongs to the peptidase S11 family
CLEDNEIB_01999	4.31e-195	nnrD	4.2.1.136, 5.1.99.6	-	H	ko:K17758,ko:K17759	-	ko00000,ko01000	Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
CLEDNEIB_02000	9.06e-159	-	-	-	M	-	-	-	ErfK YbiS YcfS YnhG
CLEDNEIB_02001	2.93e-119	-	-	-	K	-	-	-	Virulence activator alpha C-term
CLEDNEIB_02003	4.12e-24	pfoSR	-	-	S	ko:K07035	-	ko00000	Phosphotransferase system, EIIC
CLEDNEIB_02004	3.16e-145	pfoSR	-	-	S	ko:K07035	-	ko00000	Phosphotransferase system, EIIC
CLEDNEIB_02005	0.0	slpX	-	-	S	-	-	-	SLAP domain
CLEDNEIB_02006	7.06e-120	-	-	-	-	-	-	-	-
CLEDNEIB_02009	2.88e-272	-	-	-	-	-	-	-	-
CLEDNEIB_02010	7.68e-160	gntR1	-	-	K	ko:K03710	-	ko00000,ko03000	UTRA
CLEDNEIB_02011	4.14e-81	tagD	2.7.7.39	-	IM	ko:K00980	ko00564,map00564	ko00000,ko00001,ko01000	Glycerol-3-phosphate cytidylyltransferase
CLEDNEIB_02012	2.99e-216	scrK	2.7.1.4	-	GK	ko:K00847	ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100	ko00000,ko00001,ko01000	ROK family
CLEDNEIB_02013	6.88e-223	degV1	-	-	S	-	-	-	DegV family
CLEDNEIB_02014	2.71e-207	phnD	-	-	P	ko:K02044	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter, phosphonate, periplasmic substrate-binding protein
CLEDNEIB_02015	0.0	dnaB	3.6.4.12	-	L	ko:K02314	ko03030,ko04112,map03030,map04112	ko00000,ko00001,ko01000,ko03032	Participates in initiation and elongation during chromosome replication
CLEDNEIB_02016	7.8e-97	rplI	-	-	J	ko:K02939	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to the 23S rRNA
CLEDNEIB_02017	0.0	yybT	-	-	T	-	-	-	signaling protein consisting of a modified GGDEF domain and a DHH domain
CLEDNEIB_02018	6.57e-50	-	-	-	K	-	-	-	LysR substrate binding domain
CLEDNEIB_02019	4.52e-127	-	-	-	K	-	-	-	LysR substrate binding domain
CLEDNEIB_02020	2.2e-141	-	-	-	K	-	-	-	Transcriptional regulator, LysR family
CLEDNEIB_02021	2.49e-47	-	-	-	S	-	-	-	Cytochrome b5
CLEDNEIB_02022	4.4e-212	arbZ	-	-	I	-	-	-	Phosphate acyltransferases
CLEDNEIB_02023	1.06e-207	-	-	-	M	-	-	-	Glycosyl transferase family 8
CLEDNEIB_02024	1.4e-234	-	-	-	M	-	-	-	Glycosyl transferase family 8
CLEDNEIB_02025	2.1e-184	arbx	-	-	M	-	-	-	Glycosyl transferase family 8
CLEDNEIB_02026	3.75e-165	-	-	-	I	-	-	-	Acyl-transferase
CLEDNEIB_02027	5.61e-70	-	-	-	S	ko:K06921	-	ko00000	Archaea bacterial proteins of unknown function
CLEDNEIB_02028	3.7e-38	-	-	-	S	ko:K06921	-	ko00000	Archaea bacterial proteins of unknown function
CLEDNEIB_02029	1.49e-121	-	-	-	M	ko:K21471	-	ko00000,ko01000,ko01002,ko01011	NlpC/P60 family
CLEDNEIB_02030	1.09e-122	gmk2	2.7.4.8	-	F	ko:K00942	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko00002,ko01000	Guanylate kinase homologues.
CLEDNEIB_02031	5.24e-41	-	-	-	-	-	-	-	-
CLEDNEIB_02032	0.0	-	-	-	S	-	-	-	O-antigen ligase like membrane protein
CLEDNEIB_02033	6.65e-129	-	-	-	-	-	-	-	-
CLEDNEIB_02034	3.75e-98	nrdI	-	-	F	ko:K03647	-	ko00000	Belongs to the NrdI family
CLEDNEIB_02035	3.77e-15	nrdF	1.17.4.1	-	F	ko:K00526	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CLEDNEIB_02036	1.17e-11	-	-	-	-	-	-	-	-
CLEDNEIB_02037	2.72e-101	-	-	-	-	-	-	-	-
CLEDNEIB_02038	8.54e-91	-	-	-	-	-	-	-	-
CLEDNEIB_02039	4.88e-59	-	-	-	L	ko:K07473	-	ko00000,ko02048	Addiction module antitoxin, RelB DinJ family
CLEDNEIB_02040	8.29e-63	repA	-	-	S	-	-	-	Replication initiator protein A
CLEDNEIB_02041	3.53e-92	repA	-	-	S	-	-	-	Replication initiator protein A
CLEDNEIB_02042	3.84e-84	-	-	-	M	-	-	-	domain protein
CLEDNEIB_02043	3.24e-116	-	-	-	M	-	-	-	YSIRK type signal peptide
CLEDNEIB_02044	9.08e-21	-	-	-	M	-	-	-	domain protein
CLEDNEIB_02045	2.71e-180	pnuC	-	-	H	ko:K03811	-	ko00000,ko02000	nicotinamide mononucleotide transporter
CLEDNEIB_02046	2.26e-15	-	-	-	-	-	-	-	-
CLEDNEIB_02047	3.3e-196	nadE	6.3.1.5	-	F	ko:K01916	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
CLEDNEIB_02048	0.0	pncB	6.3.4.21	-	F	ko:K00763	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
CLEDNEIB_02049	1.64e-262	-	-	-	M	-	-	-	Glycosyl transferases group 1
CLEDNEIB_02050	1.69e-172	tagA	2.4.1.187	GT26	F	ko:K05946	ko05111,map05111	ko00000,ko00001,ko01000,ko01003	Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
CLEDNEIB_02051	0.0	yjcA	-	-	S	ko:K19350	ko02010,map02010	ko00000,ko00001,ko01504,ko02000	ABC transporter
CLEDNEIB_02052	0.0	-	-	-	H	-	-	-	ThiF family
CLEDNEIB_02053	0.0	-	-	-	V	-	-	-	ABC transporter transmembrane region
CLEDNEIB_02054	0.0	carB1	6.3.5.5	-	F	ko:K01955	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthase
CLEDNEIB_02055	1.44e-255	carA	6.3.5.5	-	F	ko:K01956	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthetase glutamine chain
CLEDNEIB_02056	6.46e-212	rluD	5.4.99.23	-	J	ko:K06180	-	ko00000,ko01000,ko03009	Responsible for synthesis of pseudouridine from uracil
CLEDNEIB_02057	7.77e-103	lspA	3.4.23.36	-	MU	ko:K03101	ko03060,map03060	ko00000,ko00001,ko01000,ko01002	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
CLEDNEIB_02058	0.0	fhs	6.3.4.3	-	F	ko:K01938	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Belongs to the formate--tetrahydrofolate ligase family
CLEDNEIB_02059	1.65e-254	cpdA	-	-	S	-	-	-	Calcineurin-like phosphoesterase
CLEDNEIB_02060	5.4e-274	ypsC	-	-	L	ko:K07444	-	ko00000,ko01000	Belongs to the methyltransferase superfamily
CLEDNEIB_02061	1.29e-91	gpsB	-	-	D	-	-	-	Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
CLEDNEIB_02062	1.13e-137	ypsA	-	-	S	-	-	-	Belongs to the UPF0398 family
CLEDNEIB_02063	1.07e-150	recU	-	-	L	ko:K03700	-	ko00000,ko03400	Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
CLEDNEIB_02064	0.0	ponA	2.4.1.129, 3.4.16.4	GT51	M	ko:K05366	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01003,ko01011	penicillin-binding protein 1A
CLEDNEIB_02065	2.95e-146	nth	4.2.99.18	-	L	ko:K10773	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
CLEDNEIB_02066	1.39e-148	dnaD	-	-	L	ko:K02086	-	ko00000	DnaD domain protein
CLEDNEIB_02067	0.0	asnS	6.1.1.22	-	J	ko:K01893	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Asparaginyl-tRNA synthetase
CLEDNEIB_02068	3.49e-116	ypmB	-	-	S	-	-	-	Protein conserved in bacteria
CLEDNEIB_02069	0.0	dinG	3.6.4.12	-	L	ko:K03722	-	ko00000,ko01000,ko03400	helicase involved in DNA repair and perhaps also replication
CLEDNEIB_02070	0.0	addA	3.6.4.12	-	L	ko:K16898	-	ko00000,ko01000,ko03400	ATP-dependent helicase nuclease subunit A
CLEDNEIB_02071	0.0	rexB	3.6.4.12	-	L	ko:K16899	-	ko00000,ko01000,ko03400	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
CLEDNEIB_02072	1.53e-214	mvk	2.7.1.36	-	I	ko:K00869	ko00900,ko01100,ko01110,ko01130,ko04146,map00900,map01100,map01110,map01130,map04146	ko00000,ko00001,ko00002,ko01000	GHMP kinases N terminal domain
CLEDNEIB_02073	3.03e-230	mvaD	4.1.1.33	-	I	ko:K01597	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	diphosphomevalonate decarboxylase
CLEDNEIB_02074	4.69e-261	mvaK2	2.7.4.2	-	I	ko:K00938	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	phosphomevalonate kinase
CLEDNEIB_02075	1.77e-238	fni	5.3.3.2	-	C	ko:K01823	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
CLEDNEIB_02076	0.0	rsmF	-	-	J	-	-	-	NOL1 NOP2 sun family protein
CLEDNEIB_02077	3.94e-225	-	-	-	-	-	-	-	-
CLEDNEIB_02078	1.83e-180	-	-	-	-	-	-	-	-
CLEDNEIB_02079	7.35e-134	lepB	3.4.21.89	-	U	ko:K03100	ko02024,ko03060,map02024,map03060	ko00000,ko00001,ko01000,ko01002	Belongs to the peptidase S26 family
CLEDNEIB_02080	7.83e-38	-	-	-	-	-	-	-	-
CLEDNEIB_02081	5.68e-146	rarA	-	-	L	ko:K07478	-	ko00000	recombination factor protein RarA
CLEDNEIB_02082	3.03e-13	rarA	-	-	L	ko:K07478	-	ko00000	recombination factor protein RarA
CLEDNEIB_02083	1.19e-177	-	-	-	-	-	-	-	-
CLEDNEIB_02084	1.13e-187	-	-	-	-	-	-	-	-
CLEDNEIB_02085	9.64e-187	-	-	-	-	-	-	-	-
CLEDNEIB_02086	3.13e-160	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
CLEDNEIB_02087	7.06e-81	lexA	-	-	K	ko:K07979	-	ko00000,ko03000	Transcriptional regulator, GntR family
CLEDNEIB_02088	6.01e-309	pepT	3.4.11.4	-	E	ko:K01258	-	ko00000,ko01000,ko01002	Cleaves the N-terminal amino acid of tripeptides
CLEDNEIB_02089	3.45e-197	yqfO	-	-	S	-	-	-	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
CLEDNEIB_02090	6.11e-159	trmK	2.1.1.217	-	S	ko:K06967	-	ko00000,ko01000,ko03016	SAM-dependent methyltransferase
CLEDNEIB_02091	1.14e-53	-	-	-	S	-	-	-	Enterocin A Immunity
CLEDNEIB_02092	0.0	nrdE	1.17.4.1	-	F	ko:K00525	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CLEDNEIB_02093	1.39e-96	nrdI	-	-	F	ko:K03647	-	ko00000	Probably involved in ribonucleotide reductase function
CLEDNEIB_02094	2.11e-249	nrdF	1.17.4.1	-	F	ko:K00526	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CLEDNEIB_02095	2.99e-107	dar	1.1.1.304, 1.1.1.76	-	IQ	ko:K03366	ko00650,map00650	ko00000,ko00001,ko01000	reductase
CLEDNEIB_02096	8.84e-52	metQ1	-	-	P	ko:K02073	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the nlpA lipoprotein family
CLEDNEIB_02097	1.77e-33	metQ1	-	-	P	ko:K02073	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the nlpA lipoprotein family
CLEDNEIB_02098	6.75e-42	-	-	-	-	-	-	-	-
CLEDNEIB_02099	3.27e-53	-	-	-	-	-	-	-	-
CLEDNEIB_02100	4.22e-82	-	-	-	L	-	-	-	NUDIX domain
CLEDNEIB_02101	5.16e-218	fba	4.1.2.13, 4.1.2.29	-	G	ko:K01624,ko:K03339	ko00010,ko00030,ko00051,ko00562,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00562,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Fructose-1,6-bisphosphate aldolase, class II
CLEDNEIB_02102	0.0	argS	6.1.1.19	-	J	ko:K01887	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Arginyl-tRNA synthetase
CLEDNEIB_02103	5.02e-20	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
CLEDNEIB_02104	2.74e-145	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
CLEDNEIB_02105	7.07e-132	padC	-	-	Q	ko:K13727	-	ko00000,ko01000	Phenolic acid decarboxylase
CLEDNEIB_02106	2.01e-209	galU	2.7.7.9	-	M	ko:K00963	ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	UTP-glucose-1-phosphate uridylyltransferase
CLEDNEIB_02107	0.0	speA	4.1.1.17, 4.1.1.18, 4.1.1.19	-	E	ko:K01581,ko:K01582,ko:K01585	ko00310,ko00330,ko00480,ko00960,ko01100,ko01110,ko01130,map00310,map00330,map00480,map00960,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Orn/Lys/Arg decarboxylase, C-terminal domain
CLEDNEIB_02108	0.0	-	-	-	E	-	-	-	Amino acid permease
CLEDNEIB_02109	7.87e-78	-	-	-	L	-	-	-	COG2826 Transposase and inactivated derivatives, IS30 family
CLEDNEIB_02110	5.51e-123	-	2.3.1.183	-	M	ko:K03823	ko00440,ko01130,map00440,map01130	ko00000,ko00001,ko01000	acetyltransferase (GNAT) family
CLEDNEIB_02111	1.72e-19	atkY	-	-	K	ko:K02171	ko01501,map01501	ko00000,ko00001,ko00002,ko01504,ko03000	Transcriptional regulator
CLEDNEIB_02112	0.0	copB	3.6.3.3, 3.6.3.4, 3.6.3.5, 3.6.3.54	-	P	ko:K01533,ko:K01534,ko:K17686	ko01524,ko04016,map01524,map04016	ko00000,ko00001,ko01000	P-type ATPase
CLEDNEIB_02113	1.8e-191	mdt(A)	-	-	EGP	ko:K08217	-	br01600,ko00000,ko01504,ko02000	Major facilitator Superfamily
CLEDNEIB_02114	4.71e-45	mdt(A)	-	-	EGP	ko:K08217	-	br01600,ko00000,ko01504,ko02000	transporter
CLEDNEIB_02115	1.02e-101	-	-	-	-	-	-	-	-
CLEDNEIB_02118	0.0	ltaS	2.7.8.20	-	M	ko:K19005	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
CLEDNEIB_02119	4.52e-140	vanZ	-	-	V	-	-	-	VanZ like family
CLEDNEIB_02120	0.0	pgi	5.3.1.9	-	G	ko:K01810	ko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the GPI family
CLEDNEIB_02121	1.85e-58	-	-	-	-	-	-	-	-
CLEDNEIB_02122	7.16e-101	-	-	-	S	-	-	-	Domain of unknown function (DUF5067)
CLEDNEIB_02123	4.45e-83	-	-	-	-	-	-	-	-
CLEDNEIB_02125	3.74e-154	yjhB	3.6.1.13	-	F	ko:K01515	ko00230,map00230	ko00000,ko00001,ko01000	NUDIX domain
CLEDNEIB_02126	1.51e-185	-	-	-	F	-	-	-	Phosphorylase superfamily
CLEDNEIB_02127	3.85e-98	codA	-	-	F	-	-	-	Cytidine and deoxycytidylate deaminase zinc-binding region
CLEDNEIB_02129	1.07e-104	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
CLEDNEIB_02130	4.53e-66	-	-	-	-	-	-	-	-
CLEDNEIB_02131	2.49e-114	luxS	4.4.1.21	-	H	ko:K07173	ko00270,ko01100,ko01230,ko02024,ko02026,ko05111,map00270,map01100,map01230,map02024,map02026,map05111	ko00000,ko00001,ko00002,ko01000	Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
CLEDNEIB_02132	0.0	metE	2.1.1.14	-	E	ko:K00549	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
CLEDNEIB_02133	6.1e-213	metF	1.5.1.20	-	C	ko:K00297	ko00670,ko00720,ko01100,ko01120,ko01200,ko01523,map00670,map00720,map01100,map01120,map01200,map01523	ko00000,ko00001,ko00002,ko01000	Methylenetetrahydrofolate reductase
CLEDNEIB_02134	1.02e-238	hrcA	-	-	K	ko:K03705	-	ko00000,ko03000	Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
CLEDNEIB_02135	4.62e-114	grpE	-	-	O	ko:K03687	-	ko00000,ko03029,ko03110	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
CLEDNEIB_02136	0.0	dnaK	-	-	O	ko:K04043	ko03018,ko04212,ko05152,map03018,map04212,map05152	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	Heat shock 70 kDa protein
CLEDNEIB_02137	1.95e-272	dnaJ	-	-	O	ko:K03686	-	ko00000,ko03029,ko03110	ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
CLEDNEIB_02138	5.1e-109	tnpA1	-	-	L	-	-	-	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
CLEDNEIB_02139	4.77e-38	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
CLEDNEIB_02140	4.4e-185	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
CLEDNEIB_02141	1.26e-127	-	-	-	L	-	-	-	Integrase
CLEDNEIB_02142	6.33e-162	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
CLEDNEIB_02143	6.83e-126	prtB	3.4.21.96	-	O	ko:K01361	-	ko00000,ko01000,ko01002,ko03110	Belongs to the peptidase S8 family
CLEDNEIB_02144	8.89e-42	tnpA1	-	-	L	-	-	-	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
CLEDNEIB_02145	2.68e-198	prsA	5.2.1.8	-	M	ko:K07533	-	ko00000,ko01000,ko03110	Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
CLEDNEIB_02146	6.03e-57	-	-	-	-	-	-	-	-
CLEDNEIB_02147	2.77e-103	hit	-	-	FG	ko:K02503	-	ko00000,ko04147	Scavenger mRNA decapping enzyme C-term binding
CLEDNEIB_02148	6.86e-72	-	-	-	K	ko:K21498	-	ko00000,ko02048	Helix-turn-helix XRE-family like proteins
CLEDNEIB_02149	9.02e-175	ecsA	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
CLEDNEIB_02150	1.26e-269	ecsB	-	-	U	ko:K01992	-	ko00000,ko00002,ko02000	ABC transporter
CLEDNEIB_02151	1.3e-159	trmB	2.1.1.33	-	J	ko:K03439	-	ko00000,ko01000,ko03016	Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
CLEDNEIB_02152	1.64e-72	ytpP	-	-	CO	-	-	-	Thioredoxin
CLEDNEIB_02153	3.06e-157	XK27_10290	-	-	J	ko:K06878	-	ko00000	Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
CLEDNEIB_02154	0.0	-	-	-	S	-	-	-	SLAP domain
CLEDNEIB_02155	0.0	murC	6.3.2.8	-	M	ko:K01924	ko00471,ko00550,ko01100,map00471,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Belongs to the MurCDEF family
CLEDNEIB_02156	2.04e-226	-	-	-	S	-	-	-	SLAP domain
CLEDNEIB_02157	0.0	-	-	-	M	-	-	-	Peptidase family M1 domain
CLEDNEIB_02158	6.24e-246	-	-	-	S	-	-	-	Bacteriocin helveticin-J
CLEDNEIB_02159	1.74e-28	-	-	-	-	-	-	-	-
CLEDNEIB_02160	1.87e-68	-	-	-	L	ko:K07473	-	ko00000,ko02048	RelB antitoxin
CLEDNEIB_02161	9.65e-193	hflC	-	-	O	ko:K04087	-	ko00000,ko00002,ko01000	prohibitin homologues
CLEDNEIB_02162	2.07e-156	-	-	-	C	-	-	-	Flavodoxin
CLEDNEIB_02163	0.0	fhs	6.3.4.3	-	F	ko:K01938	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Belongs to the formate--tetrahydrofolate ligase family
CLEDNEIB_02164	3.23e-103	purE	5.4.99.18	-	F	ko:K01588	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
CLEDNEIB_02165	6.62e-277	purK	6.3.4.18	-	F	ko:K01589	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
CLEDNEIB_02166	1.19e-170	purC	6.3.2.6	-	F	ko:K01923	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the SAICAR synthetase family
CLEDNEIB_02167	1.27e-50	purS	6.3.5.3	-	F	ko:K01952	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
CLEDNEIB_02168	1.56e-154	purQ	6.3.5.3	-	F	ko:K01952	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
CLEDNEIB_02169	0.0	purL	6.3.5.3	-	F	ko:K01952	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
CLEDNEIB_02170	0.0	purF	2.4.2.14	-	F	ko:K00764	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko01002	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
CLEDNEIB_02171	1.8e-246	purM	6.3.3.1	-	F	ko:K01933	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Phosphoribosylformylglycinamidine cyclo-ligase
CLEDNEIB_02172	1.78e-134	purN	2.1.2.2	-	F	ko:K11175	ko00230,ko00670,ko01100,ko01110,ko01130,map00230,map00670,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
CLEDNEIB_02173	0.0	purH	2.1.2.3, 3.5.4.10	-	F	ko:K00602	ko00230,ko00670,ko01100,ko01110,ko01130,ko01523,map00230,map00670,map01100,map01110,map01130,map01523	ko00000,ko00001,ko00002,ko01000,ko04147	Bifunctional purine biosynthesis protein PurH
CLEDNEIB_02174	1.26e-304	purD	6.3.4.13	-	F	ko:K01945	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the GARS family
CLEDNEIB_02175	7.62e-53	-	-	-	L	ko:K19091	-	ko00000,ko01000,ko02048	CRISPR associated protein Cas6
CLEDNEIB_02176	1.67e-127	-	-	-	S	ko:K19088	-	ko00000,ko02048	CRISPR-associated protein (Cas_CXXC_CXXC)
CLEDNEIB_02177	1.3e-130	-	-	-	L	ko:K19075	-	ko00000,ko02048	CRISPR-associated negative auto-regulator DevR/Csa2
CLEDNEIB_02178	3.02e-84	-	-	-	L	ko:K19090	-	ko00000,ko02048	CRISPR-associated protein Cas5
CLEDNEIB_02179	1.07e-216	-	-	-	L	ko:K07012	-	ko00000,ko01000,ko02048	CRISPR-associated helicase cas3
CLEDNEIB_02180	2.94e-63	-	3.1.12.1	-	L	ko:K07464	-	ko00000,ko01000,ko02048	Domain of unknown function DUF83
CLEDNEIB_02181	7.26e-155	cas1	-	-	L	ko:K15342	-	ko00000,ko02048,ko03400	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
CLEDNEIB_02182	9.43e-39	cas2	-	-	L	ko:K09951	-	ko00000,ko02048	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
CLEDNEIB_02183	1.31e-182	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
CLEDNEIB_02184	1.26e-59	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
CLEDNEIB_02186	1.05e-220	-	-	-	V	-	-	-	ABC transporter transmembrane region
CLEDNEIB_02188	1.12e-109	tnpA1	-	-	L	-	-	-	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
CLEDNEIB_02189	7.66e-97	birA	6.3.4.15	-	H	ko:K03524	ko00780,ko01100,map00780,map01100	ko00000,ko00001,ko01000,ko03000	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
CLEDNEIB_02190	1.44e-51	-	-	-	L	ko:K07483	-	ko00000	Transposase and inactivated derivatives
CLEDNEIB_02191	4.88e-200	is18	-	-	L	-	-	-	Integrase core domain
CLEDNEIB_02192	2e-99	-	-	-	S	ko:K07088	-	ko00000	Membrane transport protein
CLEDNEIB_02193	1.1e-188	idhA	1.1.1.28	-	CH	ko:K03778	ko00620,ko01120,map00620,map01120	ko00000,ko00001,ko01000	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CLEDNEIB_02194	4.82e-55	XK27_08630	-	-	T	ko:K07166	-	ko00000	Belongs to the UPF0237 family
CLEDNEIB_02195	2.41e-314	XK27_08635	-	-	S	ko:K09157	-	ko00000	UPF0210 protein
CLEDNEIB_02196	2.49e-42	traI	5.99.1.2	-	L	ko:K03169	-	ko00000,ko01000,ko03032	This gene contains a nucleotide ambiguity which may be the result of a sequencing error
CLEDNEIB_02197	6.04e-200	-	-	-	M	ko:K21471	-	ko00000,ko01000,ko01002,ko01011	NlpC/P60 family
CLEDNEIB_02199	2.61e-12	-	-	-	-	-	-	-	-
CLEDNEIB_02200	0.0	-	-	-	S	-	-	-	SLAP domain
CLEDNEIB_02202	2.86e-40	-	-	-	-	-	-	-	-
CLEDNEIB_02204	1.29e-17	tnpA1	-	-	L	-	-	-	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
CLEDNEIB_02205	5.5e-31	-	-	-	L	-	-	-	Transposase
CLEDNEIB_02206	1.35e-106	-	-	-	L	-	-	-	Transposase
CLEDNEIB_02207	1.74e-82	-	-	-	L	-	-	-	Transposase
CLEDNEIB_02208	1.99e-205	-	-	-	-	-	-	-	-
CLEDNEIB_02209	3.99e-74	-	-	-	L	-	-	-	Integrase
CLEDNEIB_02210	5.42e-310	slpX	-	-	S	-	-	-	SLAP domain
CLEDNEIB_02211	6.1e-131	-	-	-	S	-	-	-	Bacteriocin helveticin-J
CLEDNEIB_02212	3.03e-92	-	-	-	S	-	-	-	Bacteriocin helveticin-J
CLEDNEIB_02213	7.77e-34	-	-	-	K	-	-	-	Helix-turn-helix domain
CLEDNEIB_02214	2.35e-268	-	-	-	C	-	-	-	Glycerophosphoryl diester phosphodiesterase family
CLEDNEIB_02215	8.41e-88	-	-	-	S	-	-	-	GtrA-like protein
CLEDNEIB_02216	7.61e-218	yfdH	-	GT2	M	ko:K12999,ko:K20534	-	ko00000,ko01000,ko01003,ko01005,ko02000	Glycosyltransferase like family 2
CLEDNEIB_02217	3.11e-167	-	-	-	S	-	-	-	Bacterial membrane protein, YfhO
CLEDNEIB_02218	5.04e-71	-	-	-	-	-	-	-	-
CLEDNEIB_02219	1.82e-131	dut	3.6.1.23	-	F	ko:K01520	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	dUTP diphosphatase
CLEDNEIB_02220	0.0	radA	-	-	O	ko:K04485	-	ko00000,ko03400	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
CLEDNEIB_02221	0.0	gltX	6.1.1.24	-	J	ko:K09698	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
CLEDNEIB_02222	2.06e-157	comC	3.4.23.43	-	NOU	ko:K02236	-	ko00000,ko00002,ko01000,ko02044	Bacterial Peptidase A24 N-terminal domain
CLEDNEIB_02223	7.28e-92	rpsL	-	-	J	ko:K02950	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
CLEDNEIB_02224	8.05e-106	rpsG	-	-	J	ko:K02992	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
CLEDNEIB_02225	0.0	fusA	-	-	J	ko:K02355	-	ko00000,ko03012,ko03029	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
CLEDNEIB_02226	6.86e-98	-	-	-	S	-	-	-	SLAP domain
CLEDNEIB_02227	4.16e-118	-	-	-	S	-	-	-	SLAP domain
CLEDNEIB_02228	2.68e-309	glmU	2.3.1.157, 2.7.7.23	-	M	ko:K04042	ko00520,ko01100,ko01130,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
CLEDNEIB_02229	3.54e-191	purR	-	-	F	ko:K09685	-	ko00000,ko03000	pur operon repressor
CLEDNEIB_02230	3.35e-51	veg	-	-	S	-	-	-	Biofilm formation stimulator VEG