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ORF_ID	e_value	Gene_name	EC_number	CAZy	COGs	KEGG_ko	KEGG_Pathway	BRITE	Description
DOOMIPKP_00001	2.93e-304	dnaA	-	-	L	ko:K02313	ko02020,ko04112,map02020,map04112	ko00000,ko00001,ko03032,ko03036	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
DOOMIPKP_00002	2.9e-254	dnaN	2.7.7.7	-	L	ko:K02338	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
DOOMIPKP_00003	1.13e-48	yaaA	-	-	S	ko:K14761	-	ko00000,ko03009	S4 domain protein YaaA
DOOMIPKP_00004	1.79e-268	recF	-	-	L	ko:K03629	ko03440,map03440	ko00000,ko00001,ko03400	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
DOOMIPKP_00005	0.0	gyrB	5.99.1.3	-	L	ko:K02470	-	ko00000,ko01000,ko03032,ko03400	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
DOOMIPKP_00006	0.0	gyrA	5.99.1.3	-	L	ko:K02469	-	ko00000,ko01000,ko03032,ko03400	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
DOOMIPKP_00007	1.93e-65	rpsF	-	-	J	ko:K02990	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Binds together with S18 to 16S ribosomal RNA
DOOMIPKP_00008	7.46e-108	ssb	-	-	L	ko:K03111	ko03030,ko03430,ko03440,map03030,map03430,map03440	ko00000,ko00001,ko03029,ko03032,ko03400	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
DOOMIPKP_00009	1.89e-47	rpsR	-	-	J	ko:K02963	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
DOOMIPKP_00010	0.0	yybT	-	-	T	-	-	-	signaling protein consisting of a modified GGDEF domain and a DHH domain
DOOMIPKP_00011	3.87e-97	rplI	-	-	J	ko:K02939	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to the 23S rRNA
DOOMIPKP_00012	0.0	dnaB	3.6.4.12	-	L	ko:K02314	ko03030,ko04112,map03030,map04112	ko00000,ko00001,ko01000,ko03032	Participates in initiation and elongation during chromosome replication
DOOMIPKP_00013	2.36e-218	phnD	-	-	P	ko:K02044	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter, phosphonate, periplasmic substrate-binding protein
DOOMIPKP_00014	5.95e-211	degV1	-	-	S	-	-	-	DegV family
DOOMIPKP_00015	9.6e-213	scrK	2.7.1.4	-	GK	ko:K00847	ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100	ko00000,ko00001,ko01000	ROK family
DOOMIPKP_00016	3.81e-18	-	-	-	S	-	-	-	CsbD-like
DOOMIPKP_00017	2.26e-31	-	-	-	S	-	-	-	Transglycosylase associated protein
DOOMIPKP_00018	1.17e-288	-	-	-	I	-	-	-	Protein of unknown function (DUF2974)
DOOMIPKP_00019	2.03e-155	-	-	-	S	ko:K07507	-	ko00000,ko02000	MgtC family
DOOMIPKP_00021	1.26e-209	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
DOOMIPKP_00023	2.89e-67	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
DOOMIPKP_00024	5.94e-38	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
DOOMIPKP_00025	1.33e-58	-	-	-	-	-	-	-	-
DOOMIPKP_00027	6.56e-130	hsdR	3.1.21.3	-	V	ko:K01153	-	ko00000,ko01000,ko02048	Subunit R is required for both nuclease and ATPase activities, but not for modification
DOOMIPKP_00028	3.98e-171	ermA	2.1.1.184	-	J	ko:K00561	-	br01600,ko00000,ko01000,ko01504,ko03009	Ribosomal RNA adenine dimethylase
DOOMIPKP_00029	0.0	-	-	-	L	-	-	-	Transposase
DOOMIPKP_00030	4.65e-110	vatD	2.3.1.79	-	S	ko:K00661,ko:K18234	-	ko00000,ko01000,ko01504	acetyltransferase'
DOOMIPKP_00031	7.26e-154	ermA	2.1.1.184	-	J	ko:K00561	-	br01600,ko00000,ko01000,ko01504,ko03009	Ribosomal RNA adenine dimethylase
DOOMIPKP_00032	0.0	-	-	-	S	-	-	-	Uncharacterised protein family (UPF0236)
DOOMIPKP_00034	2.83e-35	-	-	-	K	ko:K07729	-	ko00000,ko03000	Helix-turn-helix XRE-family like proteins
DOOMIPKP_00036	1.67e-10	potE	-	-	E	-	-	-	Amino acid permease
DOOMIPKP_00037	4.76e-97	potE	-	-	E	-	-	-	thought to be involved in transport amino acids across the membrane
DOOMIPKP_00039	3.86e-190	-	-	-	S	-	-	-	Putative ABC-transporter type IV
DOOMIPKP_00040	0.0	-	-	-	M	-	-	-	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
DOOMIPKP_00041	4.42e-148	tnpA1	-	-	L	-	-	-	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
DOOMIPKP_00042	0.0	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
DOOMIPKP_00043	2.54e-225	ydbI	-	-	K	-	-	-	AI-2E family transporter
DOOMIPKP_00044	6.53e-133	-	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase
DOOMIPKP_00045	2.55e-26	-	-	-	-	-	-	-	-
DOOMIPKP_00046	3.74e-316	-	-	-	G	ko:K16211	-	ko00000,ko02000	Major Facilitator
DOOMIPKP_00047	8.39e-104	-	-	-	E	-	-	-	Zn peptidase
DOOMIPKP_00048	2.03e-53	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
DOOMIPKP_00049	2.96e-56	-	-	-	-	-	-	-	-
DOOMIPKP_00050	1.66e-61	-	-	-	S	-	-	-	Bacteriocin helveticin-J
DOOMIPKP_00051	6.66e-16	-	-	-	S	-	-	-	SLAP domain
DOOMIPKP_00052	6.04e-60	-	-	-	-	-	-	-	-
DOOMIPKP_00053	4.28e-176	XK27_08845	-	-	S	ko:K05833	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
DOOMIPKP_00054	6.76e-168	XK27_08840	-	-	U	ko:K05832	-	ko00000,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
DOOMIPKP_00055	3.5e-225	ABC-SBP	-	-	S	ko:K01989	-	ko00000,ko00002,ko02000	ABC transporter
DOOMIPKP_00056	0.0	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
DOOMIPKP_00057	1.4e-194	-	-	-	K	-	-	-	Helix-turn-helix domain
DOOMIPKP_00058	3.57e-175	ysaA	3.1.3.5, 3.8.1.2	-	S	ko:K01560,ko:K07025,ko:K08723	ko00230,ko00240,ko00361,ko00625,ko00760,ko01100,ko01110,ko01120,map00230,map00240,map00361,map00625,map00760,map01100,map01110,map01120	ko00000,ko00001,ko01000	Haloacid dehalogenase-like hydrolase
DOOMIPKP_00059	1.54e-109	-	-	-	-	-	-	-	-
DOOMIPKP_00060	1.34e-96	-	-	-	M	-	-	-	LysM domain
DOOMIPKP_00062	1.6e-63	-	-	-	-	-	-	-	-
DOOMIPKP_00063	8.26e-251	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
DOOMIPKP_00064	2.85e-151	-	-	-	K	-	-	-	Helix-turn-helix domain
DOOMIPKP_00065	0.0	fusA1	-	-	J	-	-	-	elongation factor G
DOOMIPKP_00066	2.29e-185	-	3.1.3.102, 3.1.3.104	-	S	ko:K20861	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	haloacid dehalogenase-like hydrolase
DOOMIPKP_00067	4.77e-247	ldhA	1.1.1.28	-	C	ko:K03778,ko:K18347	ko00620,ko01120,ko01502,ko02020,map00620,map01120,map01502,map02020	ko00000,ko00001,ko00002,ko01000,ko01504	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
DOOMIPKP_00068	1.44e-07	-	-	-	S	-	-	-	YSIRK type signal peptide
DOOMIPKP_00070	1.2e-202	xth	3.1.11.2	-	L	ko:K01142	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	exodeoxyribonuclease III
DOOMIPKP_00071	0.0	-	-	-	E	ko:K20265	ko02024,map02024	ko00000,ko00001,ko02000	amino acid
DOOMIPKP_00072	0.0	-	-	-	L	-	-	-	Helicase C-terminal domain protein
DOOMIPKP_00073	1.36e-260	pbpX	-	-	V	-	-	-	Beta-lactamase
DOOMIPKP_00074	7.1e-288	-	-	-	N	ko:K09384	-	ko00000	Uncharacterized conserved protein (DUF2075)
DOOMIPKP_00075	1.77e-93	def2	3.5.1.88	-	J	ko:K01462	-	ko00000,ko01000	Removes the formyl group from the N-terminal Met of newly synthesized proteins
DOOMIPKP_00080	3.24e-06	-	-	-	L	-	-	-	Transposase
DOOMIPKP_00081	1.38e-107	-	-	-	J	-	-	-	FR47-like protein
DOOMIPKP_00082	3.37e-50	-	-	-	S	-	-	-	Cytochrome B5
DOOMIPKP_00083	2.76e-215	arbZ	-	-	I	-	-	-	Phosphate acyltransferases
DOOMIPKP_00084	4.5e-234	-	-	-	M	-	-	-	Glycosyl transferase family 8
DOOMIPKP_00085	5.72e-238	-	-	-	M	-	-	-	Glycosyl transferase family 8
DOOMIPKP_00086	7.53e-203	arbx	-	-	M	-	-	-	Glycosyl transferase family 8
DOOMIPKP_00087	3.44e-191	-	-	-	I	-	-	-	Acyl-transferase
DOOMIPKP_00089	1.09e-46	-	-	-	-	-	-	-	-
DOOMIPKP_00091	3.98e-169	yycF	-	-	K	ko:K07668	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	response regulator
DOOMIPKP_00092	0.0	vicK	2.7.13.3	-	T	ko:K07652	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
DOOMIPKP_00093	0.0	yycH	-	-	S	-	-	-	YycH protein
DOOMIPKP_00094	7.44e-192	yycI	-	-	S	-	-	-	YycH protein
DOOMIPKP_00095	1.45e-189	vicX	3.1.26.11	-	S	ko:K00784	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	domain protein
DOOMIPKP_00096	2.87e-227	htrA	3.4.21.107	-	O	ko:K04771	ko01503,ko02020,map01503,map02020	ko00000,ko00001,ko00002,ko01000,ko01002,ko03110	serine protease
DOOMIPKP_00097	8.64e-107	rlmH	2.1.1.177	-	J	ko:K00783	-	ko00000,ko01000,ko03009	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
DOOMIPKP_00098	4.85e-135	-	-	-	G	-	-	-	Peptidase_C39 like family
DOOMIPKP_00099	6.58e-225	pepI	3.4.11.5	-	E	ko:K01259	ko00330,map00330	ko00000,ko00001,ko01000,ko01002	Releases the N-terminal proline from various substrates
DOOMIPKP_00100	4.82e-114	-	-	-	P	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Cobalt transport protein
DOOMIPKP_00101	0.0	-	-	-	S	ko:K16786,ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
DOOMIPKP_00102	1.05e-222	-	-	-	K	-	-	-	helix_turn_helix, arabinose operon control protein
DOOMIPKP_00103	1.41e-208	htpX	-	-	O	ko:K03799	-	ko00000,ko00002,ko01000,ko01002	Belongs to the peptidase M48B family
DOOMIPKP_00104	1e-125	lemA	-	-	S	ko:K03744	-	ko00000	LemA family
DOOMIPKP_00105	2.75e-248	ysdE	-	-	P	-	-	-	Citrate transporter
DOOMIPKP_00106	6.75e-92	-	-	-	S	-	-	-	Iron-sulphur cluster biosynthesis
DOOMIPKP_00107	0.0	glpQ	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	Membrane domain of glycerophosphoryl diester phosphodiesterase
DOOMIPKP_00108	9.69e-25	-	-	-	-	-	-	-	-
DOOMIPKP_00109	1.75e-165	-	-	-	-	-	-	-	-
DOOMIPKP_00110	2.77e-10	-	-	-	-	-	-	-	-
DOOMIPKP_00111	1.1e-272	-	-	-	M	-	-	-	Glycosyl transferase
DOOMIPKP_00112	2.67e-07	-	-	-	G	-	-	-	Glycosyl hydrolases family 8
DOOMIPKP_00113	4.7e-191	-	-	-	G	-	-	-	Glycosyl hydrolases family 8
DOOMIPKP_00114	2e-157	yfbR	-	-	S	ko:K07023	-	ko00000	HD containing hydrolase-like enzyme
DOOMIPKP_00115	9.69e-195	-	-	-	L	-	-	-	HNH nucleases
DOOMIPKP_00116	2.22e-112	yhaH	-	-	S	-	-	-	Protein of unknown function (DUF805)
DOOMIPKP_00117	1.01e-173	glnQ	-	-	E	ko:K17076	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
DOOMIPKP_00118	0.0	XK27_05795	-	-	P	ko:K17073,ko:K17074	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
DOOMIPKP_00119	1.41e-155	yxlJ	3.2.2.21	-	L	ko:K03652	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Belongs to the DNA glycosylase MPG family
DOOMIPKP_00120	3.78e-85	yeaO	-	-	S	-	-	-	Protein of unknown function, DUF488
DOOMIPKP_00121	2.31e-164	terC	-	-	P	-	-	-	Integral membrane protein TerC family
DOOMIPKP_00122	2.16e-120	adaB	2.1.1.63	-	L	ko:K00567,ko:K10778,ko:K13531	-	ko00000,ko01000,ko03000,ko03400	6-O-methylguanine DNA methyltransferase, DNA binding domain
DOOMIPKP_00123	1.45e-168	cobB	-	-	K	ko:K12410	-	ko00000,ko01000	SIR2 family
DOOMIPKP_00124	5.61e-113	-	-	-	-	-	-	-	-
DOOMIPKP_00125	0.0	cls	-	-	I	ko:K06131	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
DOOMIPKP_00126	4.32e-233	-	-	-	S	-	-	-	Alpha/beta hydrolase of unknown function (DUF915)
DOOMIPKP_00127	1.25e-190	rnhA	3.1.26.4	-	L	ko:K03469	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
DOOMIPKP_00128	9.18e-187	-	-	-	S	-	-	-	Protein of unknown function (DUF1002)
DOOMIPKP_00129	9.44e-193	epsV	-	-	S	-	-	-	glycosyl transferase family 2
DOOMIPKP_00130	3.19e-165	-	-	-	S	-	-	-	Alpha/beta hydrolase family
DOOMIPKP_00131	6.83e-73	-	-	-	-	-	-	-	-
DOOMIPKP_00132	8.73e-234	prs2	2.7.6.1	-	F	ko:K00948	ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
DOOMIPKP_00133	2.92e-161	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
DOOMIPKP_00134	1.3e-176	-	-	-	-	-	-	-	-
DOOMIPKP_00135	1.41e-49	-	-	-	S	-	-	-	Uncharacterised protein family (UPF0236)
DOOMIPKP_00136	1.24e-272	-	-	-	S	-	-	-	Uncharacterised protein family (UPF0236)
DOOMIPKP_00137	3.49e-289	-	-	-	L	-	-	-	COG3547 Transposase and inactivated derivatives
DOOMIPKP_00138	2e-51	-	-	-	L	-	-	-	Replication initiation factor
DOOMIPKP_00139	5.04e-92	cat	2.3.1.28	-	V	ko:K19271	-	br01600,ko00000,ko01000,ko01504	This enzyme is an effector of chloramphenicol resistance in bacteria
DOOMIPKP_00140	7.35e-134	ermA	2.1.1.184	-	J	ko:K00561	-	br01600,ko00000,ko01000,ko01504,ko03009	Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family
DOOMIPKP_00141	3.47e-285	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
DOOMIPKP_00142	0.0	glnPH2	-	-	P	ko:K02029,ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter permease
DOOMIPKP_00143	4.12e-170	glnQ	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
DOOMIPKP_00144	4.45e-292	-	-	-	S	-	-	-	Cysteine-rich secretory protein family
DOOMIPKP_00145	1.06e-257	ddl	6.3.2.4	-	F	ko:K01921	ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Belongs to the D-alanine--D-alanine ligase family
DOOMIPKP_00146	2.85e-163	-	-	-	-	-	-	-	-
DOOMIPKP_00147	2.4e-258	yibE	-	-	S	-	-	-	overlaps another CDS with the same product name
DOOMIPKP_00148	7.8e-167	yibF	-	-	S	-	-	-	overlaps another CDS with the same product name
DOOMIPKP_00149	1.86e-207	-	-	-	I	-	-	-	alpha/beta hydrolase fold
DOOMIPKP_00150	0.0	-	-	-	G	-	-	-	Belongs to the glycosyl hydrolase 31 family
DOOMIPKP_00151	5.32e-278	nagA	3.5.1.25	-	G	ko:K01443	ko00520,ko01130,map00520,map01130	ko00000,ko00001,ko01000	Belongs to the metallo-dependent hydrolases superfamily. NagA family
DOOMIPKP_00152	0.0	-	-	-	S	ko:K06921	-	ko00000	Archaea bacterial proteins of unknown function
DOOMIPKP_00154	4.83e-117	ntd	2.4.2.6	-	F	ko:K08728	ko00240,map00240	ko00000,ko00001,ko01000	Nucleoside
DOOMIPKP_00155	5.58e-111	-	2.7.1.200, 2.7.1.204	-	G	ko:K02773,ko:K20112	ko00052,ko01100,ko02060,map00052,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
DOOMIPKP_00156	2.06e-190	-	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Tyrosine phosphatase family
DOOMIPKP_00157	3.78e-110	usp5	-	-	T	-	-	-	universal stress protein
DOOMIPKP_00158	4.46e-204	phnD	-	-	P	ko:K02044	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Phosphonate ABC transporter
DOOMIPKP_00159	1.67e-175	phnC	3.6.3.28	-	P	ko:K02041	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
DOOMIPKP_00160	5.6e-162	phnB	-	-	P	ko:K02042	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
DOOMIPKP_00161	7.44e-190	-	-	-	P	ko:K02042	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
DOOMIPKP_00162	7.97e-138	tag	3.2.2.20	-	L	ko:K01246	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	glycosylase
DOOMIPKP_00163	5.18e-109	-	-	-	-	-	-	-	-
DOOMIPKP_00164	0.0	-	-	-	S	-	-	-	Calcineurin-like phosphoesterase
DOOMIPKP_00165	0.0	asnB	6.3.5.4	-	E	ko:K01953	ko00250,ko01100,ko01110,map00250,map01100,map01110	ko00000,ko00001,ko01000,ko01002	Asparagine synthase
DOOMIPKP_00166	0.0	yxbA	6.3.1.12	-	S	ko:K17810	-	ko00000,ko01000	ATP-grasp enzyme
DOOMIPKP_00167	0.0	nrdD	1.1.98.6	-	F	ko:K21636	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Ribonucleoside-triphosphate reductase
DOOMIPKP_00168	1.35e-180	nrdG	1.97.1.4	-	O	ko:K04068	-	ko00000,ko01000	Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
DOOMIPKP_00169	6.88e-132	yitW	-	-	S	-	-	-	Iron-sulfur cluster assembly protein
DOOMIPKP_00170	2.19e-292	XK27_04775	-	-	S	ko:K09155	-	ko00000	PAS domain
DOOMIPKP_00171	1.98e-278	yqjV	-	-	EGP	-	-	-	Major Facilitator Superfamily
DOOMIPKP_00172	0.0	pepO	-	-	O	ko:K07386	-	ko00000,ko01000,ko01002	Peptidase family M13
DOOMIPKP_00173	0.0	kup	-	-	P	ko:K03549	-	ko00000,ko02000	Transport of potassium into the cell
DOOMIPKP_00174	5.61e-98	-	-	-	-	-	-	-	-
DOOMIPKP_00175	3.75e-48	-	-	-	S	-	-	-	PFAM Archaeal ATPase
DOOMIPKP_00177	1.35e-77	-	-	-	T	ko:K07171	-	ko00000,ko01000,ko02048	PemK-like, MazF-like toxin of type II toxin-antitoxin system
DOOMIPKP_00178	3.61e-60	-	-	-	-	-	-	-	-
DOOMIPKP_00179	2.77e-25	-	-	-	-	-	-	-	-
DOOMIPKP_00180	3.69e-20	-	-	-	-	-	-	-	-
DOOMIPKP_00181	7.09e-53	-	-	-	S	-	-	-	Protein of unknown function (DUF2922)
DOOMIPKP_00182	7.43e-298	-	-	-	S	-	-	-	SLAP domain
DOOMIPKP_00183	2.47e-250	-	3.6.4.12	-	K	ko:K03655	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Putative ATP-dependent DNA helicase recG C-terminal
DOOMIPKP_00184	4.33e-95	-	-	-	-	-	-	-	-
DOOMIPKP_00186	9.28e-113	-	-	-	K	-	-	-	DNA-templated transcription, initiation
DOOMIPKP_00188	2.02e-75	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
DOOMIPKP_00189	3.42e-154	-	-	-	S	-	-	-	SLAP domain
DOOMIPKP_00190	7.84e-104	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
DOOMIPKP_00192	6.55e-96	atkY	-	-	K	ko:K02171	ko01501,map01501	ko00000,ko00001,ko00002,ko01504,ko03000	Copper transport repressor CopY TcrY
DOOMIPKP_00193	0.0	copB	3.6.3.3, 3.6.3.4, 3.6.3.5, 3.6.3.54	-	P	ko:K01533,ko:K01534,ko:K17686	ko01524,ko04016,map01524,map04016	ko00000,ko00001,ko01000	P-type ATPase
DOOMIPKP_00195	1.01e-55	-	-	-	L	-	-	-	transposase activity
DOOMIPKP_00196	2.97e-286	-	-	-	NU	-	-	-	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
DOOMIPKP_00197	2.08e-265	-	3.2.1.96, 3.5.1.28	GH73	M	ko:K01227,ko:K01447,ko:K13714,ko:K13731	ko00511,ko05100,map00511,map05100	ko00000,ko00001,ko01000	N-acetylmuramoyl-L-alanine amidase
DOOMIPKP_00198	0.0	yjbQ	-	-	P	ko:K03455,ko:K03499	-	ko00000,ko02000	TrkA C-terminal domain protein
DOOMIPKP_00199	2.71e-151	pcp	3.4.19.3	-	O	ko:K01304	-	ko00000,ko01000,ko01002	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
DOOMIPKP_00200	4.46e-228	-	-	-	S	-	-	-	Oxidoreductase family, NAD-binding Rossmann fold
DOOMIPKP_00201	9.57e-176	-	-	-	-	-	-	-	-
DOOMIPKP_00202	5.84e-173	-	-	-	-	-	-	-	-
DOOMIPKP_00203	4.51e-171	gpmA	5.4.2.11	-	G	ko:K01834	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
DOOMIPKP_00204	5.18e-128	-	-	-	G	-	-	-	Aldose 1-epimerase
DOOMIPKP_00205	3.41e-257	brpA	-	-	K	-	-	-	Cell envelope-like function transcriptional attenuator common domain protein
DOOMIPKP_00206	1.78e-146	plsY1	2.3.1.15	-	I	ko:K08591	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
DOOMIPKP_00207	0.0	XK27_08315	-	-	M	-	-	-	Sulfatase
DOOMIPKP_00208	1.27e-309	tyrS	6.1.1.1	-	J	ko:K01866	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
DOOMIPKP_00209	1.97e-72	-	-	-	-	-	-	-	-
DOOMIPKP_00211	0.0	pepC2	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	aminopeptidase
DOOMIPKP_00212	2.62e-159	ypgQ	-	-	S	ko:K06950	-	ko00000	Metal dependent phosphohydrolases with conserved 'HD' motif.
DOOMIPKP_00213	0.0	oppA	-	-	E	ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
DOOMIPKP_00214	0.0	oppA	-	-	E	ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
DOOMIPKP_00215	4.91e-264	guaB	1.1.1.205	-	F	ko:K00088	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
DOOMIPKP_00216	1.34e-191	oppB	-	-	P	ko:K15581	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC-type dipeptide oligopeptide nickel transport systems, permease components
DOOMIPKP_00217	6.71e-241	oppC	-	-	EP	ko:K15582	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC-type dipeptide oligopeptide nickel transport systems, permease components
DOOMIPKP_00218	6.08e-253	oppD	-	-	P	ko:K02031,ko:K15583	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
DOOMIPKP_00219	2.66e-221	oppF	-	-	P	ko:K10823	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
DOOMIPKP_00220	0.0	pepE	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	aminopeptidase
DOOMIPKP_00221	2.49e-95	hsp	-	-	O	ko:K13993	ko04141,map04141	ko00000,ko00001,ko03110	Belongs to the small heat shock protein (HSP20) family
DOOMIPKP_00222	5.69e-100	greA	-	-	K	ko:K03624	-	ko00000,ko03021	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
DOOMIPKP_00223	2.37e-143	-	-	-	-	-	-	-	-
DOOMIPKP_00225	1.66e-143	-	-	-	E	-	-	-	Belongs to the SOS response-associated peptidase family
DOOMIPKP_00226	4.07e-245	trpS	6.1.1.2	-	J	ko:K01867	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-I aminoacyl-tRNA synthetase family
DOOMIPKP_00227	6.1e-116	comEB	3.5.4.12	-	F	ko:K01493	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko02044	MafB19-like deaminase
DOOMIPKP_00228	3.22e-135	-	-	-	S	ko:K06872	-	ko00000	TPM domain
DOOMIPKP_00229	0.0	mgtA	3.6.3.2	-	P	ko:K01531	-	ko00000,ko01000	COG0474 Cation transport ATPase
DOOMIPKP_00231	1.01e-294	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
DOOMIPKP_00232	5.06e-146	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
DOOMIPKP_00234	1.41e-195	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
DOOMIPKP_00235	0.0	metG	6.1.1.10	-	J	ko:K01874	ko00450,ko00970,map00450,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
DOOMIPKP_00236	7.48e-187	tatD	-	-	L	ko:K03424	-	ko00000,ko01000	hydrolase, TatD family
DOOMIPKP_00237	5.17e-129	rnmV	3.1.26.8	-	J	ko:K05985	-	ko00000,ko01000	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
DOOMIPKP_00238	1.91e-204	ksgA	2.1.1.182	-	J	ko:K02528	-	ko00000,ko01000,ko03009	Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
DOOMIPKP_00239	1.72e-53	veg	-	-	S	-	-	-	Biofilm formation stimulator VEG
DOOMIPKP_00240	3.54e-191	purR	-	-	F	ko:K09685	-	ko00000,ko03000	pur operon repressor
DOOMIPKP_00241	7.68e-309	glmU	2.3.1.157, 2.7.7.23	-	M	ko:K04042	ko00520,ko01100,ko01130,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
DOOMIPKP_00242	5.52e-113	-	-	-	-	-	-	-	-
DOOMIPKP_00243	0.0	-	-	-	S	-	-	-	SLAP domain
DOOMIPKP_00244	5.4e-226	prs	2.7.6.1	-	F	ko:K00948	ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
DOOMIPKP_00245	1.26e-215	-	-	-	GK	-	-	-	ROK family
DOOMIPKP_00246	1.41e-48	-	-	-	-	-	-	-	-
DOOMIPKP_00247	0.0	-	-	-	S	ko:K06885	-	ko00000	Metal dependent phosphohydrolases with conserved 'HD' motif.
DOOMIPKP_00248	5.01e-89	-	-	-	S	-	-	-	Domain of unknown function (DUF1934)
DOOMIPKP_00249	4.63e-92	rpoE	-	-	K	ko:K03048	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko03021,ko03400	Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
DOOMIPKP_00250	0.0	pyrG	6.3.4.2	-	F	ko:K01937	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
DOOMIPKP_00251	1.89e-312	murA	2.5.1.7	-	M	ko:K00790	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
DOOMIPKP_00252	5.91e-114	-	-	-	K	-	-	-	acetyltransferase
DOOMIPKP_00253	0.0	pepDA	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
DOOMIPKP_00254	7.84e-201	msmR	-	-	K	-	-	-	AraC-like ligand binding domain
DOOMIPKP_00255	6.55e-291	pbuX	-	-	F	ko:K03458,ko:K16169	-	ko00000,ko02000	xanthine permease
DOOMIPKP_00256	4.58e-134	xpt	2.4.2.22	-	F	ko:K03816	ko00230,ko01100,ko01110,map00230,map01100,map01110	ko00000,ko00001,ko01000	Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
DOOMIPKP_00257	0.0	guaA	6.3.5.2	-	F	ko:K01951	ko00230,ko00983,ko01100,map00230,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko01002	Catalyzes the synthesis of GMP from XMP
DOOMIPKP_00259	3.89e-133	-	-	-	D	-	-	-	nuclear chromosome segregation
DOOMIPKP_00261	2.93e-70	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
DOOMIPKP_00262	3.86e-157	-	-	-	M	-	-	-	Rib/alpha-like repeat
DOOMIPKP_00263	5.22e-05	-	-	-	-	-	-	-	-
DOOMIPKP_00265	4.85e-75	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
DOOMIPKP_00266	5.56e-38	yjdF3	-	-	S	-	-	-	Protein of unknown function (DUF2992)
DOOMIPKP_00267	1.6e-79	ydeP	-	-	K	-	-	-	Transcriptional regulator, HxlR family
DOOMIPKP_00268	1.18e-253	qor	1.1.1.1, 1.6.5.5	-	C	ko:K00001,ko:K00344	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily
DOOMIPKP_00269	7.87e-126	ogt	2.1.1.63	-	L	ko:K00567	-	ko00000,ko01000,ko03400	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
DOOMIPKP_00270	4.37e-124	-	-	-	-	-	-	-	-
DOOMIPKP_00271	2.22e-20	-	-	-	P	-	-	-	Voltage gated chloride channel
DOOMIPKP_00272	1.59e-149	-	-	-	L	-	-	-	Resolvase, N-terminal
DOOMIPKP_00273	0.0	-	-	-	L	ko:K07496	-	ko00000	Putative transposase DNA-binding domain
DOOMIPKP_00274	2.26e-183	-	-	-	P	-	-	-	Voltage gated chloride channel
DOOMIPKP_00275	1.2e-238	-	-	-	C	-	-	-	FMN-dependent dehydrogenase
DOOMIPKP_00276	1.01e-69	-	-	-	-	-	-	-	-
DOOMIPKP_00277	3.35e-56	-	-	-	-	-	-	-	-
DOOMIPKP_00278	2.31e-296	glyA	2.1.2.1	-	E	ko:K00600	ko00260,ko00460,ko00630,ko00670,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko01523,map00260,map00460,map00630,map00670,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map01523	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
DOOMIPKP_00279	0.0	-	-	-	E	-	-	-	amino acid
DOOMIPKP_00280	2.72e-199	yhaX	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
DOOMIPKP_00281	0.0	dexB	3.2.1.70	-	G	ko:K01215	-	ko00000,ko01000	Alpha amylase, catalytic domain protein
DOOMIPKP_00282	1.07e-52	rpmE	-	-	J	ko:K02909	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L31
DOOMIPKP_00283	0.0	murF	6.3.2.10	-	M	ko:K01929	ko00300,ko00550,ko01100,ko01502,map00300,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
DOOMIPKP_00284	0.0	cshA	3.6.4.13	-	F	ko:K05592	ko03018,map03018	ko00000,ko00001,ko01000,ko03009,ko03019	DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
DOOMIPKP_00285	9.39e-80	acpS	2.7.8.7	-	I	ko:K00997	ko00770,map00770	ko00000,ko00001,ko01000	Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
DOOMIPKP_00286	1.62e-276	alr	5.1.1.1, 5.1.1.5	-	E	ko:K01775,ko:K20707	ko00473,ko01100,ko01502,map00473,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
DOOMIPKP_00287	5.03e-166	-	-	-	S	-	-	-	(CBS) domain
DOOMIPKP_00288	2.93e-234	ldh	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	Belongs to the LDH MDH superfamily. LDH family
DOOMIPKP_00289	1.89e-134	pth	3.1.1.29	-	J	ko:K01056	-	ko00000,ko01000,ko03012	The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
DOOMIPKP_00290	0.0	mfd	-	-	L	ko:K03723	ko03420,map03420	ko00000,ko00001,ko01000,ko03400	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
DOOMIPKP_00291	7.32e-46	yabO	-	-	J	-	-	-	S4 domain protein
DOOMIPKP_00292	7.52e-78	divIC	-	-	D	ko:K13052	-	ko00000,ko03036	Septum formation initiator
DOOMIPKP_00293	3.95e-82	-	-	-	J	ko:K07571	-	ko00000	S1 RNA binding domain
DOOMIPKP_00294	2.75e-307	tilS	2.4.2.8, 6.3.4.19	-	J	ko:K04075,ko:K15780	ko00230,ko01100,ko01110,map00230,map01100,map01110	ko00000,ko00001,ko01000,ko03016	Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
DOOMIPKP_00295	0.0	ftsH	-	-	O	ko:K03798	-	ko00000,ko00002,ko01000,ko01002,ko03110	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
DOOMIPKP_00296	7.9e-214	hslO	-	-	O	ko:K04083	-	ko00000,ko03110	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
DOOMIPKP_00297	6.79e-249	dus	-	-	J	ko:K05540	-	ko00000,ko01000,ko03016	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
DOOMIPKP_00298	0.0	lysS	6.1.1.6	-	J	ko:K04567	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-II aminoacyl-tRNA synthetase family
DOOMIPKP_00304	3.19e-105	ytsP	1.8.4.14	-	T	ko:K08968	ko00270,map00270	ko00000,ko00001,ko01000	GAF domain-containing protein
DOOMIPKP_00305	0.0	clpC	-	-	O	ko:K03696	ko01100,map01100	ko00000,ko03110	Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
DOOMIPKP_00306	0.0	rpoB	2.7.7.6	-	K	ko:K03043	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
DOOMIPKP_00307	0.0	rpoC	2.7.7.6	-	K	ko:K03046	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
DOOMIPKP_00308	7.71e-157	comC	3.4.23.43	-	NOU	ko:K02236	-	ko00000,ko00002,ko01000,ko02044	Bacterial Peptidase A24 N-terminal domain
DOOMIPKP_00309	3.47e-90	rpsL	-	-	J	ko:K02950	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
DOOMIPKP_00310	1.39e-106	rpsG	-	-	J	ko:K02992	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
DOOMIPKP_00311	0.0	fusA	-	-	J	ko:K02355	-	ko00000,ko03012,ko03029	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
DOOMIPKP_00312	4.46e-66	rpsJ	-	-	J	ko:K02946	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Involved in the binding of tRNA to the ribosomes
DOOMIPKP_00313	6.64e-146	rplC	-	-	J	ko:K02906	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
DOOMIPKP_00314	4.68e-138	rplD	-	-	J	ko:K02926	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the polypeptide exit tunnel
DOOMIPKP_00315	1.14e-63	rplW	-	-	J	ko:K02892	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
DOOMIPKP_00316	8.1e-198	rplB	-	-	J	ko:K02886	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
DOOMIPKP_00317	1.14e-62	rpsS	-	-	J	ko:K02965	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
DOOMIPKP_00318	9.07e-73	rplV	-	-	J	ko:K02890	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
DOOMIPKP_00319	8.7e-157	rpsC	-	-	J	ko:K02982	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
DOOMIPKP_00320	1.66e-100	rplP	-	-	J	ko:K02878	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
DOOMIPKP_00321	1.45e-34	rpmC	-	-	J	ko:K02904	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uL29 family
DOOMIPKP_00322	1.56e-55	rpsQ	-	-	J	ko:K02961	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
DOOMIPKP_00323	3.62e-79	rplN	-	-	J	ko:K02874	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
DOOMIPKP_00324	3.03e-44	rplX	-	-	J	ko:K02895	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
DOOMIPKP_00325	1.23e-123	rplE	-	-	J	ko:K02931	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
DOOMIPKP_00326	1e-39	rpsN	-	-	J	ko:K02954	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
DOOMIPKP_00327	7.94e-90	rpsH	-	-	J	ko:K02994	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
DOOMIPKP_00328	7.18e-121	rplF	-	-	J	ko:K02933	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
DOOMIPKP_00329	4.84e-73	rplR	-	-	J	ko:K02881	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
DOOMIPKP_00330	3.73e-110	rpsE	-	-	J	ko:K02988	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
DOOMIPKP_00331	2.22e-34	rpmD	-	-	J	ko:K02907	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L30
DOOMIPKP_00332	4.95e-93	rplO	-	-	J	ko:K02876	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to the 23S rRNA
DOOMIPKP_00333	1.25e-301	secY	-	-	U	ko:K03076	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
DOOMIPKP_00334	3.7e-155	adk	2.7.4.3	-	F	ko:K00939	ko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
DOOMIPKP_00335	3.13e-46	infA	-	-	J	ko:K02518	-	ko00000,ko03012	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
DOOMIPKP_00336	1.89e-21	rpmJ	-	-	J	ko:K02919	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL36 family
DOOMIPKP_00337	2.07e-73	rpsM	-	-	J	ko:K02952	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
DOOMIPKP_00338	3.82e-82	rpsK	-	-	J	ko:K02948	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
DOOMIPKP_00339	3.62e-218	rpoA	2.7.7.6	-	K	ko:K03040	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
DOOMIPKP_00340	2.23e-80	rplQ	-	-	J	ko:K02879	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L17
DOOMIPKP_00341	4.86e-197	ecfA1	-	-	P	ko:K16786	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
DOOMIPKP_00342	2.73e-202	ecfA2	-	-	P	ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
DOOMIPKP_00343	1.6e-177	ecfT	-	-	U	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
DOOMIPKP_00344	7.21e-193	truA	5.4.99.12	-	J	ko:K06173	-	ko00000,ko01000,ko03016	Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
DOOMIPKP_00345	3.22e-103	rplM	-	-	J	ko:K02871	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
DOOMIPKP_00346	1.67e-86	rpsI	-	-	J	ko:K02996	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uS9 family
DOOMIPKP_00347	8.45e-71	-	-	-	-	-	-	-	-
DOOMIPKP_00348	1.24e-89	-	5.4.2.11	-	G	ko:K01834	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Phosphoglycerate mutase family
DOOMIPKP_00350	4.75e-06	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
DOOMIPKP_00351	7.59e-203	-	-	-	M	-	-	-	Belongs to the glycosyl hydrolase 28 family
DOOMIPKP_00352	6.48e-104	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
DOOMIPKP_00353	5.79e-138	-	3.5.1.124	-	S	ko:K03152	-	ko00000,ko01000,ko01002	DJ-1/PfpI family
DOOMIPKP_00354	2.7e-153	-	3.8.1.2	-	S	ko:K01560	ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120	ko00000,ko00001,ko01000	Haloacid dehalogenase-like hydrolase
DOOMIPKP_00355	1.05e-171	-	-	-	S	ko:K07090	-	ko00000	membrane transporter protein
DOOMIPKP_00356	4.67e-162	-	-	-	G	-	-	-	Belongs to the phosphoglycerate mutase family
DOOMIPKP_00357	5.08e-207	-	-	-	P	ko:K16264	-	ko00000,ko02000	cation diffusion facilitator family transporter
DOOMIPKP_00358	2.42e-33	-	-	-	-	-	-	-	-
DOOMIPKP_00359	3.43e-164	gpmA1	5.4.2.11	-	G	ko:K01834	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
DOOMIPKP_00360	1.99e-235	-	-	-	S	-	-	-	AAA domain
DOOMIPKP_00361	0.0	pepC	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	Peptidase C1-like family
DOOMIPKP_00362	4.51e-69	-	-	-	-	-	-	-	-
DOOMIPKP_00363	5.22e-131	dut	3.6.1.23	-	F	ko:K01520	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	dUTP diphosphatase
DOOMIPKP_00364	0.0	radA	-	-	O	ko:K04485	-	ko00000,ko03400	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
DOOMIPKP_00365	0.0	gltX	6.1.1.24	-	J	ko:K09698	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
DOOMIPKP_00366	0.0	cysS	6.1.1.16	-	J	ko:K01883	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-I aminoacyl-tRNA synthetase family
DOOMIPKP_00367	1.26e-100	mrnC	-	-	J	ko:K11145	-	ko00000,ko01000,ko03009	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
DOOMIPKP_00368	1.56e-177	trmH	2.1.1.185	-	J	ko:K03218	-	ko00000,ko01000,ko03009	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
DOOMIPKP_00369	3.81e-123	comX	-	-	K	ko:K03088,ko:K03091,ko:K12296	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko03000,ko03021	Belongs to the sigma-70 factor family
DOOMIPKP_00370	1.19e-45	-	-	-	-	-	-	-	-
DOOMIPKP_00371	0.0	gntK	2.7.1.12	-	G	ko:K00851	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko01000	Belongs to the FGGY kinase family
DOOMIPKP_00372	0.0	dxs	2.2.1.7	-	H	ko:K01662	ko00730,ko00900,ko01100,ko01110,ko01130,map00730,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
DOOMIPKP_00373	3.73e-33	secE	-	-	U	ko:K03073	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
DOOMIPKP_00374	3.01e-131	nusG	-	-	K	ko:K02601	-	ko00000,ko03009,ko03021	Participates in transcription elongation, termination and antitermination
DOOMIPKP_00375	3.82e-90	rplK	-	-	J	ko:K02867	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
DOOMIPKP_00376	1.05e-160	rplA	-	-	J	ko:K02863	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
DOOMIPKP_00377	9.47e-202	pstS	-	-	P	ko:K02040	ko02010,ko02020,ko05152,map02010,map02020,map05152	ko00000,ko00001,ko00002,ko02000	Phosphate
DOOMIPKP_00378	1.19e-212	pstC	-	-	P	ko:K02037	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	probably responsible for the translocation of the substrate across the membrane
DOOMIPKP_00379	1.82e-198	pstA	-	-	P	ko:K02038	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Phosphate transport system permease protein PstA
DOOMIPKP_00380	7.44e-187	pstB2	3.6.3.27	-	P	ko:K02036	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
DOOMIPKP_00381	3.28e-179	pstB1	3.6.3.27	-	P	ko:K02036	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
DOOMIPKP_00382	5e-152	phoU	-	-	P	ko:K02039	-	ko00000	Plays a role in the regulation of phosphate uptake
DOOMIPKP_00383	1.88e-116	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
DOOMIPKP_00385	3.72e-111	rplJ	-	-	J	ko:K02864	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
DOOMIPKP_00386	1.61e-72	rplL	-	-	J	ko:K02935	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
DOOMIPKP_00387	1.13e-189	-	2.1.1.172	-	J	ko:K00564,ko:K10716	-	ko00000,ko01000,ko02000,ko03009	Ion channel
DOOMIPKP_00388	3.59e-147	rsmC	2.1.1.172	-	J	ko:K00564	-	ko00000,ko01000,ko03009	Methyltransferase
DOOMIPKP_00389	6.15e-36	-	-	-	-	-	-	-	-
DOOMIPKP_00390	1.08e-117	tadA	3.5.4.33	-	F	ko:K11991	-	ko00000,ko01000,ko03016	Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
DOOMIPKP_00391	0.0	dnaX	2.7.7.7	-	L	ko:K02343	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
DOOMIPKP_00392	2.26e-55	-	-	-	M	-	-	-	family 8
DOOMIPKP_00393	1.92e-46	-	-	-	M	-	-	-	lipopolysaccharide 3-alpha-galactosyltransferase activity
DOOMIPKP_00394	1.55e-68	yaaK	-	-	S	ko:K09747	-	ko00000	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
DOOMIPKP_00395	1.53e-140	recR	-	-	L	ko:K06187	ko03440,map03440	ko00000,ko00001,ko03400	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
DOOMIPKP_00396	1.18e-46	-	-	-	S	-	-	-	Protein of unknown function (DUF2508)
DOOMIPKP_00397	1.15e-146	tmk	2.7.4.9	-	F	ko:K00943	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
DOOMIPKP_00398	1.58e-70	yaaQ	-	-	S	-	-	-	Cyclic-di-AMP receptor
DOOMIPKP_00399	1.45e-199	holB	2.7.7.7	-	L	ko:K02341	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III
DOOMIPKP_00400	1.4e-80	yabA	-	-	L	-	-	-	Involved in initiation control of chromosome replication
DOOMIPKP_00401	1.84e-201	rsmI	2.1.1.198	-	H	ko:K07056	-	ko00000,ko01000,ko03009	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
DOOMIPKP_00402	1.63e-180	fat	3.1.2.21	-	I	ko:K01071	ko00061,ko01100,map00061,map01100	ko00000,ko00001,ko01000,ko01004	Acyl-ACP thioesterase
DOOMIPKP_00403	1.83e-112	-	-	-	S	-	-	-	ECF transporter, substrate-specific component
DOOMIPKP_00404	9.36e-171	yeaZ	2.3.1.234	-	O	ko:K01409,ko:K14742	-	ko00000,ko01000,ko03016	Universal bacterial protein YeaZ
DOOMIPKP_00405	3.23e-124	rimI	2.3.1.128	-	K	ko:K03789	-	ko00000,ko01000,ko03009	Ribosomal-protein-alanine acetyltransferase
DOOMIPKP_00406	4.42e-249	tsaD	2.3.1.234	-	J	ko:K01409	-	ko00000,ko01000,ko03016	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
DOOMIPKP_00407	9.77e-295	-	-	-	L	-	-	-	COG3547 Transposase and inactivated derivatives
DOOMIPKP_00408	1.35e-146	-	-	-	L	ko:K07497	-	ko00000	COG2963 Transposase and inactivated derivatives
DOOMIPKP_00409	0.0	ydiF	-	-	S	ko:K06158	-	ko00000,ko03012	ABC transporter, ATP-binding protein
DOOMIPKP_00410	8.74e-146	rex	-	-	K	ko:K01926	-	ko00000,ko03000	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
DOOMIPKP_00411	1.06e-234	scrR	-	-	K	ko:K03484	-	ko00000,ko03000	helix_turn _helix lactose operon repressor
DOOMIPKP_00412	0.0	scrB	3.2.1.26	GH32	G	ko:K01193	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	invertase
DOOMIPKP_00413	0.0	scrA	2.7.1.211	-	G	ko:K02808,ko:K02809,ko:K02810	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
DOOMIPKP_00414	2.49e-230	-	-	-	M	-	-	-	CHAP domain
DOOMIPKP_00415	6.56e-101	-	-	-	-	-	-	-	-
DOOMIPKP_00416	1.06e-58	groS	-	-	O	ko:K04078	-	ko00000,ko03029,ko03110	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
DOOMIPKP_00417	0.0	groL	-	-	O	ko:K04077	ko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
DOOMIPKP_00418	0.0	mutS	-	-	L	ko:K03555	ko03430,map03430	ko00000,ko00001,ko03400	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
DOOMIPKP_00419	0.0	mutL	-	-	L	ko:K03572	ko03430,map03430	ko00000,ko00001,ko03400	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
DOOMIPKP_00420	6.73e-133	ruvA	3.6.4.12	-	L	ko:K03550	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
DOOMIPKP_00421	2.81e-237	ruvB	3.6.4.12	-	L	ko:K03551	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
DOOMIPKP_00422	7.58e-69	yajC	-	-	U	ko:K03210	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Preprotein translocase
DOOMIPKP_00423	0.0	zwf	1.1.1.363, 1.1.1.49	-	G	ko:K00036	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,ko05230,map00030,map00480,map01100,map01110,map01120,map01130,map01200,map05230	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
DOOMIPKP_00424	6.09e-275	dinB	2.7.7.7	-	L	ko:K02346	-	ko00000,ko01000,ko03400	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
DOOMIPKP_00425	5.46e-232	nrnA	3.1.13.3, 3.1.3.7	-	S	ko:K06881	ko00920,ko01100,ko01120,map00920,map01100,map01120	ko00000,ko00001,ko01000,ko03400	DHHA1 domain protein
DOOMIPKP_00426	5.36e-305	cshB	3.6.4.13	-	JKL	ko:K05592,ko:K18692	ko03018,map03018	ko00000,ko00001,ko01000,ko03009,ko03019	DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
DOOMIPKP_00427	0.0	alaS	6.1.1.7	-	J	ko:K01872	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
DOOMIPKP_00428	5.32e-57	yrzL	-	-	S	-	-	-	Belongs to the UPF0297 family
DOOMIPKP_00429	9.37e-96	yrrK	-	-	J	ko:K07447	-	ko00000,ko01000	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
DOOMIPKP_00430	1.18e-66	yrzB	-	-	S	-	-	-	Belongs to the UPF0473 family
DOOMIPKP_00431	0.0	mutS2	-	-	L	ko:K07456	ko03430,map03430	ko00000,ko00001,ko03400	Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
DOOMIPKP_00432	5.37e-72	trxA	-	-	O	ko:K03671	ko04621,ko05418,map04621,map05418	ko00000,ko00001,ko03110	Belongs to the thioredoxin family
DOOMIPKP_00433	9.53e-76	mscL	-	-	M	ko:K03282	-	ko00000,ko02000	Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
DOOMIPKP_00434	5.62e-95	yslB	-	-	S	-	-	-	Protein of unknown function (DUF2507)
DOOMIPKP_00435	1.44e-186	murI	3.6.1.66, 5.1.1.3	-	M	ko:K01776,ko:K02428	ko00230,ko00471,ko01100,map00230,map00471,map01100	ko00000,ko00001,ko01000,ko01011	Provides the (R)-glutamate required for cell wall biosynthesis
DOOMIPKP_00436	7.8e-142	rdgB	3.6.1.66	-	F	ko:K02428	ko00230,map00230	ko00000,ko00001,ko01000	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
DOOMIPKP_00437	1.74e-186	ykuT	-	-	M	ko:K16052,ko:K22044	-	ko00000,ko02000	mechanosensitive ion channel
DOOMIPKP_00438	2.96e-23	ytxG	-	-	S	-	-	-	protein containing a divergent version of the methyl-accepting chemotaxis-like domain
DOOMIPKP_00439	3.09e-71	-	-	-	-	-	-	-	-
DOOMIPKP_00440	1.13e-272	pepQ	3.4.13.9	-	E	ko:K01271	-	ko00000,ko01000,ko01002	Creatinase/Prolidase N-terminal domain
DOOMIPKP_00441	1.5e-232	ccpA	-	-	K	ko:K02529	-	ko00000,ko03000	catabolite control protein A
DOOMIPKP_00442	0.0	-	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	glycerophosphoryl diester phosphodiesterase
DOOMIPKP_00443	9.89e-74	-	-	-	-	-	-	-	-
DOOMIPKP_00444	0.0	sasH	3.1.3.5, 3.1.3.6, 3.1.4.16, 3.6.1.45	-	F	ko:K01081,ko:K01119,ko:K07004,ko:K08693,ko:K11751	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the 5'-nucleotidase family
DOOMIPKP_00445	9.2e-136	yutD	-	-	S	-	-	-	Protein of unknown function (DUF1027)
DOOMIPKP_00446	1.1e-184	nagD	3.1.3.41	-	G	ko:K01101	ko00627,ko01120,map00627,map01120	ko00000,ko00001,ko01000	Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
DOOMIPKP_00447	2.15e-137	-	-	-	S	-	-	-	Protein of unknown function (DUF1461)
DOOMIPKP_00448	8.39e-151	dedA	-	-	S	ko:K03975	-	ko00000	SNARE-like domain protein
DOOMIPKP_00449	1.84e-236	yumC	1.18.1.2, 1.19.1.1	-	C	ko:K21567	-	ko00000,ko01000	Ferredoxin--NADP reductase
DOOMIPKP_00479	8.15e-285	-	2.4.1.337	GT4	M	ko:K19002	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000,ko01003	Glycosyl transferase 4-like domain
DOOMIPKP_00480	1.05e-255	cpoA	2.4.1.208	GT4	M	ko:K13677,ko:K13678	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000,ko01003	Glycosyltransferase, group 1 family protein
DOOMIPKP_00481	4.07e-225	mprF	-	-	S	ko:K07027	-	ko00000,ko02000	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
DOOMIPKP_00482	0.0	ltaS	2.7.8.20	-	M	ko:K19005	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
DOOMIPKP_00483	1.3e-40	secG	-	-	U	ko:K03075	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Preprotein translocase
DOOMIPKP_00484	0.0	rnr	-	-	J	ko:K12573	ko03018,map03018	ko00000,ko00001,ko01000,ko03016,ko03019	3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
DOOMIPKP_00485	2.24e-101	smpB	-	-	J	ko:K03664	-	ko00000	the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
DOOMIPKP_00488	8.18e-211	-	-	-	P	ko:K02077	-	ko00000,ko00002,ko02000	Belongs to the bacterial solute-binding protein 9 family
DOOMIPKP_00491	8.87e-288	metK	2.5.1.6	-	H	ko:K00789	ko00270,ko01100,ko01110,ko01230,map00270,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
DOOMIPKP_00492	0.0	mdr	-	-	EGP	-	-	-	Major Facilitator
DOOMIPKP_00493	0.0	pts32BC	2.7.1.211	-	G	ko:K02808,ko:K02809,ko:K02810	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
DOOMIPKP_00494	1.6e-194	murQ	4.2.1.126	-	G	ko:K07106	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
DOOMIPKP_00495	7.31e-246	-	-	-	S	ko:K09963	-	ko00000	Bacterial protein of unknown function (DUF871)
DOOMIPKP_00496	3.22e-185	-	-	-	K	-	-	-	rpiR family
DOOMIPKP_00497	0.0	cydA	1.10.3.14	-	C	ko:K00425	ko00190,ko01100,ko02020,map00190,map01100,map02020	ko00000,ko00001,ko00002,ko01000	ubiquinol oxidase
DOOMIPKP_00498	6.19e-239	cydB	1.10.3.14	-	C	ko:K00426	ko00190,ko01100,ko02020,map00190,map01100,map02020	ko00000,ko00001,ko00002,ko01000	Cytochrome d ubiquinol oxidase subunit II
DOOMIPKP_00499	0.0	cydC	-	-	CO	ko:K16013	ko02010,map02010	ko00000,ko00001,ko02000	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
DOOMIPKP_00500	0.0	cydD	-	-	CO	ko:K16012	ko02010,map02010	ko00000,ko00001,ko02000	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
DOOMIPKP_00501	3.54e-165	menG	2.1.1.163, 2.1.1.201	-	H	ko:K03183	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
DOOMIPKP_00502	8.31e-228	hepT	2.5.1.30	-	H	ko:K00805	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	Belongs to the FPP GGPP synthase family
DOOMIPKP_00503	4.18e-206	menA	2.5.1.74	-	H	ko:K02548	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01006	1,4-dihydroxy-2-naphthoate
DOOMIPKP_00504	3.01e-294	yumB	1.6.99.3	-	C	ko:K03885	ko00190,map00190	ko00000,ko00001,ko01000	NADH dehydrogenase
DOOMIPKP_00505	6.03e-117	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
DOOMIPKP_00506	0.000159	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
DOOMIPKP_00507	1.66e-216	-	-	-	K	-	-	-	LysR substrate binding domain
DOOMIPKP_00508	4.86e-157	yodM	3.6.1.27	-	I	ko:K19302	ko00550,map00550	ko00000,ko00001,ko01000,ko01011	Acid phosphatase homologues
DOOMIPKP_00509	0.0	leuS	6.1.1.4	-	J	ko:K01869	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Belongs to the class-I aminoacyl-tRNA synthetase family
DOOMIPKP_00510	0.0	ytgP	-	-	S	ko:K03328	-	ko00000	Polysaccharide biosynthesis protein
DOOMIPKP_00511	1.23e-23	pspC	-	-	KT	ko:K03973	-	ko00000,ko02048,ko03000	PspC domain
DOOMIPKP_00513	6.1e-294	dacA	3.4.16.4	-	M	ko:K07258	ko00550,ko01100,map00550,map01100	ko00000,ko00001,ko01000,ko01002,ko01011	Belongs to the peptidase S11 family
DOOMIPKP_00514	1.83e-196	nnrD	4.2.1.136, 5.1.99.6	-	H	ko:K17758,ko:K17759	-	ko00000,ko01000	Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
DOOMIPKP_00515	5.86e-131	-	-	-	M	-	-	-	ErfK YbiS YcfS YnhG
DOOMIPKP_00516	0.0	argS	6.1.1.19	-	J	ko:K01887	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Arginyl-tRNA synthetase
DOOMIPKP_00517	4.24e-217	fba	4.1.2.13, 4.1.2.29	-	G	ko:K01624,ko:K03339	ko00010,ko00030,ko00051,ko00562,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00562,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Fructose-1,6-bisphosphate aldolase, class II
DOOMIPKP_00518	3.67e-115	-	-	-	L	-	-	-	NUDIX domain
DOOMIPKP_00519	5.88e-47	-	-	-	-	-	-	-	-
DOOMIPKP_00521	3.91e-05	-	-	-	-	-	-	-	-
DOOMIPKP_00522	1.01e-294	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
DOOMIPKP_00523	6.38e-61	-	-	-	-	-	-	-	-
DOOMIPKP_00525	8.94e-121	-	-	-	-	-	-	-	-
DOOMIPKP_00527	2.45e-88	-	-	-	EGP	-	-	-	Major Facilitator
DOOMIPKP_00528	1.02e-297	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
DOOMIPKP_00529	2.34e-52	-	-	-	S	ko:K07133	-	ko00000	cog cog1373
DOOMIPKP_00530	9.61e-222	-	-	-	S	-	-	-	PFAM Archaeal ATPase
DOOMIPKP_00531	5.59e-232	-	-	-	I	-	-	-	transferase activity, transferring acyl groups other than amino-acyl groups
DOOMIPKP_00532	2.01e-163	citG	2.4.2.52	-	H	ko:K05966	ko02020,map02020	ko00000,ko00001,ko01000	2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase
DOOMIPKP_00533	2.74e-06	-	-	-	S	-	-	-	PFAM Archaeal ATPase
DOOMIPKP_00534	3.29e-183	glpF	-	-	U	ko:K02440	-	ko00000,ko02000	Belongs to the MIP aquaporin (TC 1.A.8) family
DOOMIPKP_00535	7.87e-144	-	-	-	G	-	-	-	Phosphoglycerate mutase family
DOOMIPKP_00536	0.0	pps	2.7.9.2	-	H	ko:K01007	ko00620,ko00680,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate
DOOMIPKP_00537	2.09e-208	rluA	5.4.99.23, 5.4.99.28, 5.4.99.29	-	J	ko:K06177,ko:K06180	-	ko00000,ko01000,ko03009,ko03016	Responsible for synthesis of pseudouridine from uracil
DOOMIPKP_00538	0.0	pbp2A	2.4.1.129, 3.4.16.4	GT51	M	ko:K12555	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01003,ko01011	penicillin-binding protein
DOOMIPKP_00539	8.43e-73	yheA	-	-	S	-	-	-	Belongs to the UPF0342 family
DOOMIPKP_00540	7.99e-294	yhaO	-	-	L	ko:K03547	-	ko00000,ko03400	Ser Thr phosphatase family protein
DOOMIPKP_00541	0.0	yhaN	-	-	L	-	-	-	AAA domain
DOOMIPKP_00542	2.73e-240	yhaM	-	-	S	ko:K03698	-	ko00000,ko01000,ko03019	Metal dependent phosphohydrolases with conserved 'HD' motif.
DOOMIPKP_00543	0.0	-	-	-	-	-	-	-	-
DOOMIPKP_00544	1.92e-94	eda	4.1.2.14, 4.1.3.42	-	G	ko:K01625	ko00030,ko00630,ko01100,ko01120,ko01200,map00030,map00630,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	KDPG and KHG aldolase
DOOMIPKP_00545	1.09e-196	prsA	5.2.1.8	-	M	ko:K07533	-	ko00000,ko01000,ko03110	Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
DOOMIPKP_00546	1.7e-41	-	-	-	-	-	-	-	-
DOOMIPKP_00547	1.61e-101	hit	-	-	FG	ko:K02503	-	ko00000,ko04147	Scavenger mRNA decapping enzyme C-term binding
DOOMIPKP_00548	3.67e-174	ecsA	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
DOOMIPKP_00549	4.02e-282	ecsB	-	-	U	ko:K01992	-	ko00000,ko00002,ko02000	ABC transporter
DOOMIPKP_00550	2.16e-163	trmB	2.1.1.33	-	J	ko:K03439	-	ko00000,ko01000,ko03016	Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
DOOMIPKP_00552	1.35e-71	ytpP	-	-	CO	-	-	-	Thioredoxin
DOOMIPKP_00553	8.78e-157	XK27_10290	-	-	J	ko:K06878	-	ko00000	Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
DOOMIPKP_00554	6.63e-314	murC	6.3.2.8	-	M	ko:K01924	ko00471,ko00550,ko01100,map00471,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Belongs to the MurCDEF family
DOOMIPKP_00555	2.21e-162	hemH	4.99.1.1, 4.99.1.9	-	H	ko:K01772	ko00860,ko01100,ko01110,map00860,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the ferrous insertion into protoporphyrin IX
DOOMIPKP_00556	4.73e-232	mntH	-	-	P	ko:K03322	-	ko00000,ko02000	H( )-stimulated, divalent metal cation uptake system
DOOMIPKP_00557	2.74e-257	-	-	-	M	-	-	-	Peptidase family M1 domain
DOOMIPKP_00558	4.88e-08	-	-	-	M	-	-	-	Peptidase family M1 domain
DOOMIPKP_00559	1.16e-64	-	-	-	S	-	-	-	Alpha beta hydrolase
DOOMIPKP_00560	8.57e-09	-	-	-	S	-	-	-	Alpha beta hydrolase
DOOMIPKP_00561	4.7e-237	-	-	-	S	-	-	-	Bacteriocin helveticin-J
DOOMIPKP_00562	1.33e-67	-	-	-	L	ko:K07473	-	ko00000,ko02048	RelB antitoxin
DOOMIPKP_00563	2.95e-187	hflC	-	-	O	ko:K04087	-	ko00000,ko00002,ko01000	prohibitin homologues
DOOMIPKP_00564	0.0	polA	2.7.7.7	-	L	ko:K02335	ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440	ko00000,ko00001,ko01000,ko03032,ko03400	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
DOOMIPKP_00565	1.92e-199	fpg	3.2.2.23, 4.2.99.18	-	L	ko:K10563	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
DOOMIPKP_00566	2.16e-136	coaE	2.7.1.24	-	F	ko:K00859	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
DOOMIPKP_00567	3.7e-106	nrdR	-	-	K	ko:K07738	-	ko00000,ko03000	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
DOOMIPKP_00568	1.59e-315	dnaB2	-	-	L	ko:K03346	-	ko00000,ko03032	Replication initiation and membrane attachment
DOOMIPKP_00569	2.65e-215	dnaI	-	-	L	ko:K11144	-	ko00000,ko03032	Primosomal protein DnaI
DOOMIPKP_00570	0.0	thrS	6.1.1.3	-	J	ko:K01868	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
DOOMIPKP_00571	1.67e-110	-	-	-	-	-	-	-	-
DOOMIPKP_00572	8.4e-255	-	-	-	S	-	-	-	Domain of unknown function (DUF389)
DOOMIPKP_00573	2.77e-78	-	-	-	L	-	-	-	COG2826 Transposase and inactivated derivatives, IS30 family
DOOMIPKP_00574	1.32e-49	dxs	2.2.1.7	-	H	ko:K01662	ko00730,ko00900,ko01100,ko01110,ko01130,map00730,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
DOOMIPKP_00575	1.24e-62	dxs	2.2.1.7	-	H	ko:K01662	ko00730,ko00900,ko01100,ko01110,ko01130,map00730,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
DOOMIPKP_00576	1.56e-48	ydhF	-	-	S	-	-	-	Aldo keto reductase
DOOMIPKP_00577	1.96e-51	-	-	-	K	-	-	-	HxlR-like helix-turn-helix
DOOMIPKP_00578	4.61e-97	-	-	-	K	-	-	-	LytTr DNA-binding domain
DOOMIPKP_00579	1.27e-89	-	-	-	S	-	-	-	Protein of unknown function (DUF3021)
DOOMIPKP_00580	9.84e-157	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter
DOOMIPKP_00581	6.9e-146	-	-	-	S	ko:K01992	-	ko00000,ko00002,ko02000	domain protein
DOOMIPKP_00582	8.5e-104	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
DOOMIPKP_00583	2.63e-94	infC	-	-	J	ko:K02520	-	ko00000,ko03012,ko03029	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
DOOMIPKP_00584	9.64e-38	rpmI	-	-	J	ko:K02916	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL35 family
DOOMIPKP_00585	8.69e-76	rplT	-	-	J	ko:K02887	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
DOOMIPKP_00586	1.07e-193	add	3.5.4.2, 3.5.4.4	-	F	ko:K01488,ko:K02029,ko:K21053	ko00230,ko01100,ko05340,map00230,map01100,map05340	ko00000,ko00001,ko00002,ko01000,ko02000	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
DOOMIPKP_00587	3.01e-255	tnpB	-	-	L	ko:K07496	-	ko00000	Putative transposase DNA-binding domain
DOOMIPKP_00588	6.85e-109	yqeG	-	-	S	ko:K07015	-	ko00000	HAD phosphatase, family IIIA
DOOMIPKP_00589	5.03e-256	yqeH	-	-	S	ko:K06948	-	ko00000,ko03009	Ribosome biogenesis GTPase YqeH
DOOMIPKP_00590	4.34e-158	nadD	2.7.7.18	-	H	ko:K00969	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
DOOMIPKP_00591	1.59e-141	yqeK	-	-	H	-	-	-	Hydrolase, HD family
DOOMIPKP_00592	5.95e-77	rsfS	-	-	J	ko:K09710	-	ko00000,ko03009	Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
DOOMIPKP_00593	1.39e-276	ylbM	-	-	S	-	-	-	Belongs to the UPF0348 family
DOOMIPKP_00594	2.19e-125	ylbN	-	-	S	ko:K07040	-	ko00000	Uncharacterized ACR, COG1399
DOOMIPKP_00595	3.52e-163	csrR	-	-	K	-	-	-	response regulator
DOOMIPKP_00596	0.0	arlS	2.7.13.3	-	T	ko:K18940	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
DOOMIPKP_00597	7.82e-12	-	-	-	-	-	-	-	-
DOOMIPKP_00598	3.71e-81	-	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
DOOMIPKP_00599	5.54e-26	-	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
DOOMIPKP_00600	2.32e-280	-	-	-	S	-	-	-	SLAP domain
DOOMIPKP_00601	2.42e-69	-	-	-	S	-	-	-	Abi-like protein
DOOMIPKP_00602	1.46e-95	-	-	-	S	ko:K19055	-	ko00000,ko01000,ko03016	Aminoacyl-tRNA editing domain
DOOMIPKP_00603	1.71e-216	yidC	-	-	U	ko:K03217	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044,ko03029	Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
DOOMIPKP_00604	5.58e-59	acyP	3.6.1.7	-	C	ko:K01512	ko00620,ko00627,ko01120,map00620,map00627,map01120	ko00000,ko00001,ko01000	Belongs to the acylphosphatase family
DOOMIPKP_00605	3.01e-177	spoU	-	-	J	ko:K03437	-	ko00000,ko03016	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
DOOMIPKP_00606	1.02e-82	yodB	-	-	K	-	-	-	Transcriptional regulator, HxlR family
DOOMIPKP_00608	1.88e-144	glnP9	-	-	P	ko:K02029	-	ko00000,ko00002,ko02000	ABC transporter, permease protein
DOOMIPKP_00609	5.01e-151	glnP7	-	-	P	ko:K02029	-	ko00000,ko00002,ko02000	ABC transporter permease
DOOMIPKP_00610	3.81e-171	glnQ	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
DOOMIPKP_00611	9.94e-209	cjaA	-	-	ET	ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter substrate-binding protein
DOOMIPKP_00612	3.39e-253	pheS	6.1.1.20	-	J	ko:K01889	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
DOOMIPKP_00613	0.0	pheT	6.1.1.20	-	J	ko:K01890	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
DOOMIPKP_00614	2.55e-94	greA	-	-	K	ko:K03624	-	ko00000,ko03021	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
DOOMIPKP_00615	8.21e-215	ldh3	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	lactate/malate dehydrogenase, alpha/beta C-terminal domain
DOOMIPKP_00616	4.52e-202	metQ	-	-	P	ko:K02073	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the nlpA lipoprotein family
DOOMIPKP_00617	1.8e-34	-	-	-	-	-	-	-	-
DOOMIPKP_00618	5.72e-268	sufI	-	-	Q	-	-	-	Multicopper oxidase
DOOMIPKP_00619	6.62e-115	sufI	-	-	Q	-	-	-	Multicopper oxidase
DOOMIPKP_00620	3.82e-188	-	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
DOOMIPKP_00621	0.0	oppA	-	-	E	ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter
DOOMIPKP_00622	4.11e-294	-	-	-	Q	-	-	-	Imidazolonepropionase and related amidohydrolases
DOOMIPKP_00623	1.62e-254	-	-	-	S	ko:K12941	-	ko00000,ko01002	Peptidase dimerisation domain
DOOMIPKP_00624	1.02e-172	-	-	-	S	-	-	-	Protein of unknown function (DUF3100)
DOOMIPKP_00625	7.04e-108	-	-	-	S	-	-	-	An automated process has identified a potential problem with this gene model
DOOMIPKP_00626	4.6e-61	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2263)
DOOMIPKP_00627	5.26e-164	-	-	-	S	-	-	-	SLAP domain
DOOMIPKP_00628	1.43e-119	-	-	-	-	-	-	-	-
DOOMIPKP_00630	4.25e-160	-	-	-	M	ko:K14193	ko05150,map05150	ko00000,ko00001	Iron Transport-associated domain
DOOMIPKP_00631	1.45e-203	isdE	-	-	P	ko:K02016	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Periplasmic binding protein
DOOMIPKP_00632	8.02e-204	isdF	-	-	U	ko:K02015	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DOOMIPKP_00633	5.21e-179	-	3.6.3.34	-	HP	ko:K02013	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	abc transporter atp-binding protein
DOOMIPKP_00634	2.22e-60	hupB2	-	-	L	ko:K03530	-	ko00000,ko03032,ko03036,ko03400	Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
DOOMIPKP_00635	3.33e-70	-	-	-	S	ko:K19157	-	ko00000,ko01000,ko02048	Bacterial toxin of type II toxin-antitoxin system, YafQ
DOOMIPKP_00636	9.43e-52	-	-	-	S	ko:K07473	-	ko00000,ko02048	RelB antitoxin
DOOMIPKP_00637	7.04e-218	-	-	-	G	-	-	-	BadF/BadG/BcrA/BcrD ATPase family
DOOMIPKP_00638	0.0	-	-	-	S	-	-	-	membrane
DOOMIPKP_00639	0.0	pbp2b	-	-	M	ko:K00687,ko:K12553,ko:K21465,ko:K21466	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01011	Penicillin-binding Protein
DOOMIPKP_00640	6.25e-29	rpmG	-	-	J	ko:K02913	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL33 family
DOOMIPKP_00641	1.94e-126	fthC	6.3.3.2	-	H	ko:K01934	ko00670,ko01100,map00670,map01100	ko00000,ko00001,ko01000	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
DOOMIPKP_00642	2.29e-154	gluP	3.4.21.105	-	S	ko:K19225	-	ko00000,ko01000,ko01002	Rhomboid family
DOOMIPKP_00643	1e-47	yqgQ	-	-	S	-	-	-	Bacterial protein of unknown function (DUF910)
DOOMIPKP_00644	4.95e-89	yqhL	-	-	P	-	-	-	Rhodanese-like protein
DOOMIPKP_00645	8.08e-218	miaA	2.5.1.75	-	F	ko:K00791	ko00908,ko01100,ko01110,map00908,map01100,map01110	ko00000,ko00001,ko01000,ko01006,ko03016	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
DOOMIPKP_00646	1.38e-284	ynbB	-	-	P	-	-	-	aluminum resistance
DOOMIPKP_00647	0.0	glnA	6.3.1.2	-	E	ko:K01915	ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727	ko00000,ko00001,ko01000,ko04147	glutamine synthetase
DOOMIPKP_00648	5.82e-220	-	-	-	-	-	-	-	-
DOOMIPKP_00649	5.73e-203	-	-	-	-	-	-	-	-
DOOMIPKP_00650	1.15e-150	tnpA1	-	-	L	-	-	-	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
DOOMIPKP_00651	1.53e-147	-	-	-	L	-	-	-	Helix-turn-helix domain of transposase family ISL3
DOOMIPKP_00652	2.76e-83	-	-	-	-	-	-	-	-
DOOMIPKP_00653	0.0	polYB	2.7.7.7	-	L	ko:K02346,ko:K03502	-	ko00000,ko01000,ko03400	Belongs to the DNA polymerase type-Y family
DOOMIPKP_00654	0.0	prtB	3.4.21.96	-	O	ko:K01361	-	ko00000,ko01000,ko01002,ko03110	Belongs to the peptidase S8 family
DOOMIPKP_00655	1.26e-223	dhaK	2.7.1.121	-	G	ko:K05878	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Dak1 domain
DOOMIPKP_00656	1.39e-120	dhaL	2.7.1.121	-	S	ko:K05879	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Dak2
DOOMIPKP_00657	3.47e-73	dhaM	2.7.1.121	-	S	ko:K05881	ko00561,map00561	ko00000,ko00001,ko01000,ko02000	PTS system fructose IIA component
DOOMIPKP_00658	6.05e-158	glpF	-	-	U	ko:K02440	-	ko00000,ko02000	Belongs to the MIP aquaporin (TC 1.A.8) family
DOOMIPKP_00659	5.74e-240	galE	5.1.3.2	-	M	ko:K01784	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the NAD(P)-dependent epimerase dehydratase family
DOOMIPKP_00660	5.68e-233	lacM	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	beta-galactosidase
DOOMIPKP_00661	0.0	lacL	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 2 family
DOOMIPKP_00662	1.64e-237	lacR	-	-	K	ko:K02529	-	ko00000,ko03000	Transcriptional regulator
DOOMIPKP_00663	0.0	lacS	-	-	G	ko:K11104,ko:K16209	-	ko00000,ko02000	Transporter
DOOMIPKP_00664	0.0	lacZ	3.2.1.23	-	G	ko:K12308	ko00052,map00052	ko00000,ko00001,ko01000	-beta-galactosidase
DOOMIPKP_00665	4.16e-280	galK	2.7.1.6	-	F	ko:K00849	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
DOOMIPKP_00666	0.0	galT	2.7.7.12	-	G	ko:K00965	ko00052,ko00520,ko01100,ko04917,map00052,map00520,map01100,map04917	ko00000,ko00001,ko00002,ko01000	UDP-glucose--hexose-1-phosphate uridylyltransferase
DOOMIPKP_00667	1.88e-225	galM	5.1.3.3	-	G	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the interconversion of alpha and beta anomers of maltose
DOOMIPKP_00668	2.33e-185	-	-	-	K	ko:K03484	-	ko00000,ko03000	Periplasmic binding protein domain
DOOMIPKP_00669	1.02e-227	msmE	-	-	G	ko:K10117	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding protein
DOOMIPKP_00670	8.12e-172	msmF	-	-	P	ko:K10118	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
DOOMIPKP_00671	3.24e-169	-	-	-	P	ko:K10119	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
DOOMIPKP_00672	0.0	melA	3.2.1.22	-	G	ko:K07407	ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603	ko00000,ko00001,ko01000	alpha-galactosidase
DOOMIPKP_00673	4.94e-268	msmX	-	-	P	ko:K10112	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
DOOMIPKP_00674	0.0	melA	3.2.1.22	-	G	ko:K07407	ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603	ko00000,ko00001,ko01000	alpha-galactosidase
DOOMIPKP_00675	0.0	gtfA	2.4.1.7	GH13	G	ko:K00690	ko00500,map00500	ko00000,ko00001,ko01000	Sucrose glucosyltransferase
DOOMIPKP_00676	3.92e-107	-	-	-	T	-	-	-	Region found in RelA / SpoT proteins
DOOMIPKP_00677	1.52e-135	dltr	-	-	K	-	-	-	response regulator
DOOMIPKP_00678	9.15e-301	sptS	-	-	T	-	-	-	Histidine kinase
DOOMIPKP_00679	4.74e-267	-	-	-	EGP	-	-	-	Major Facilitator Superfamily
DOOMIPKP_00680	1.59e-90	-	-	-	O	-	-	-	OsmC-like protein
DOOMIPKP_00681	1.93e-122	yhaH	-	-	S	-	-	-	Protein of unknown function (DUF805)
DOOMIPKP_00682	8.73e-117	-	-	-	-	-	-	-	-
DOOMIPKP_00683	0.0	-	-	-	-	-	-	-	-
DOOMIPKP_00684	2.71e-177	-	-	-	S	-	-	-	Fic/DOC family
DOOMIPKP_00685	1.34e-276	-	-	-	S	-	-	-	SLAP domain
DOOMIPKP_00686	3.49e-289	-	-	-	L	-	-	-	COG3547 Transposase and inactivated derivatives
DOOMIPKP_00687	4.7e-73	-	-	-	S	-	-	-	SLAP domain
DOOMIPKP_00688	0.0	potE	-	-	E	-	-	-	Amino Acid
DOOMIPKP_00689	3.32e-283	ackA	2.7.2.1	-	F	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
DOOMIPKP_00690	3.66e-312	lctO	1.13.12.4	-	C	ko:K00467,ko:K10530	ko00620,map00620	ko00000,ko00001,ko01000	L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases
DOOMIPKP_00691	6.09e-67	dapE	3.5.1.18	-	E	ko:K01439	ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000	succinyl-diaminopimelate desuccinylase
DOOMIPKP_00692	1.63e-155	dapE	3.5.1.18	-	E	ko:K01439	ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000	succinyl-diaminopimelate desuccinylase
DOOMIPKP_00693	1.6e-69	yitW	-	-	S	-	-	-	Iron-sulfur cluster assembly protein
DOOMIPKP_00694	2.21e-198	sdaAA	4.3.1.17	-	E	ko:K01752	ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230	ko00000,ko00001,ko01000	L-serine dehydratase, iron-sulfur-dependent, alpha subunit
DOOMIPKP_00695	4.01e-160	-	4.3.1.17	-	E	ko:K01752	ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230	ko00000,ko00001,ko01000	Serine dehydratase beta chain
DOOMIPKP_00696	2.27e-59	-	-	-	-	-	-	-	-
DOOMIPKP_00697	0.0	yjcA	-	-	S	ko:K19350	ko02010,map02010	ko00000,ko00001,ko01504,ko02000	ABC transporter
DOOMIPKP_00698	1.14e-49	eriC	-	-	P	ko:K03281	-	ko00000	chloride
DOOMIPKP_00700	2.73e-154	pyrE	2.4.2.10	-	F	ko:K00762	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
DOOMIPKP_00701	1.56e-164	pyrF	4.1.1.23	-	F	ko:K01591	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
DOOMIPKP_00702	1.86e-213	pyrD	1.3.1.14, 1.3.98.1	-	F	ko:K00226,ko:K17828	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
DOOMIPKP_00703	7.13e-123	pyrR	2.4.2.9	-	F	ko:K02825	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000,ko03000	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
DOOMIPKP_00704	2.22e-231	pyrB	2.1.3.2	-	F	ko:K00609	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the ATCase OTCase family
DOOMIPKP_00705	2.04e-313	pyrC	3.5.2.3	-	F	ko:K01465	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
DOOMIPKP_00706	3.47e-268	carA	6.3.5.5	-	F	ko:K01956	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthetase glutamine chain
DOOMIPKP_00707	0.0	carB	6.3.5.5	-	F	ko:K01955	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthase
DOOMIPKP_00708	0.0	lctP	-	-	C	ko:K03303	-	ko00000,ko02000	L-lactate permease
DOOMIPKP_00709	2.89e-191	-	-	-	U	ko:K05340	-	ko00000,ko02000	sugar transport
DOOMIPKP_00710	1.43e-174	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
DOOMIPKP_00711	8.74e-62	-	-	-	-	-	-	-	-
DOOMIPKP_00712	2.88e-105	msrB	1.8.4.12	-	O	ko:K07305	-	ko00000,ko01000	peptide methionine sulfoxide reductase
DOOMIPKP_00713	0.0	pepX	3.4.14.11	-	E	ko:K01281	-	ko00000,ko01000,ko01002	Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
DOOMIPKP_00714	1.9e-56	-	-	-	S	-	-	-	Alpha beta hydrolase
DOOMIPKP_00715	2.44e-49	-	-	-	-	-	-	-	-
DOOMIPKP_00716	4.33e-69	-	-	-	-	-	-	-	-
DOOMIPKP_00717	1.57e-196	supH	-	-	S	-	-	-	haloacid dehalogenase-like hydrolase
DOOMIPKP_00718	0.0	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
DOOMIPKP_00719	0.0	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
DOOMIPKP_00720	1.82e-86	yusI	1.20.4.1	-	P	ko:K00537	-	ko00000,ko01000	Belongs to the ArsC family
DOOMIPKP_00721	2.04e-226	lipA	-	-	I	-	-	-	Carboxylesterase family
DOOMIPKP_00723	2.01e-270	-	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
DOOMIPKP_00724	6.57e-206	cinI	-	-	S	ko:K06889	-	ko00000	Serine hydrolase (FSH1)
DOOMIPKP_00725	0.0	-	-	-	S	-	-	-	Predicted membrane protein (DUF2207)
DOOMIPKP_00726	2.07e-38	dmpI	5.3.2.6	-	G	ko:K01821	ko00362,ko00621,ko00622,ko01100,ko01120,ko01220,map00362,map00621,map00622,map01100,map01120,map01220	ko00000,ko00001,ko00002,ko01000	Belongs to the 4-oxalocrotonate tautomerase family
DOOMIPKP_00728	0.0	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2325)
DOOMIPKP_00729	5.24e-194	-	-	-	S	-	-	-	Uncharacterised 5xTM membrane BCR, YitT family COG1284
DOOMIPKP_00730	6.82e-66	rplU	-	-	J	ko:K02888	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein binds to 23S rRNA in the presence of protein L20
DOOMIPKP_00731	3.94e-64	rpmA	-	-	J	ko:K02899	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL27 family
DOOMIPKP_00732	3.03e-257	pepP	3.4.11.9, 3.4.13.9	-	E	ko:K01262,ko:K01271	-	ko00000,ko01000,ko01002	Creatinase/Prolidase N-terminal domain
DOOMIPKP_00733	2.11e-133	efp	-	-	J	ko:K02356	-	ko00000,ko03012	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
DOOMIPKP_00734	7.98e-93	WQ51_04310	-	-	S	ko:K10947	-	ko00000,ko03000	Asp23 family, cell envelope-related function
DOOMIPKP_00735	3.38e-86	nusB	-	-	K	ko:K03625	-	ko00000,ko03009,ko03021	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
DOOMIPKP_00736	7.19e-199	folD	1.5.1.5, 3.5.4.9	-	F	ko:K01491	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
DOOMIPKP_00737	1.14e-247	xseA	3.1.11.6	-	L	ko:K03601	ko03430,map03430	ko00000,ko00001,ko01000,ko03400	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
DOOMIPKP_00738	1.53e-47	xseB	3.1.11.6	-	L	ko:K03602	ko03430,map03430	ko00000,ko00001,ko01000,ko03400	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
DOOMIPKP_00739	1.58e-205	ispA	2.5.1.1, 2.5.1.10, 2.5.1.29	-	H	ko:K13789	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko01006	Belongs to the FPP GGPP synthase family
DOOMIPKP_00740	6.93e-195	rrmJ	2.1.1.226, 2.1.1.227	-	J	ko:K06442	-	ko00000,ko01000,ko03009	Ribosomal RNA large subunit methyltransferase J
DOOMIPKP_00741	0.0	recN	-	-	L	ko:K03631	-	ko00000,ko03400	May be involved in recombinational repair of damaged DNA
DOOMIPKP_00742	8.94e-100	-	-	-	S	-	-	-	ASCH
DOOMIPKP_00743	5.97e-145	gmk	2.7.4.8	-	F	ko:K00942	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko00002,ko01000	Essential for recycling GMP and indirectly, cGMP
DOOMIPKP_00744	2.37e-46	rpoZ	2.7.7.6	-	K	ko:K03060	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
DOOMIPKP_00745	0.0	priA	-	-	L	ko:K04066	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
DOOMIPKP_00746	3.11e-220	fmt	2.1.2.9	-	J	ko:K00604	ko00670,ko00970,map00670,map00970	ko00000,ko00001,ko01000	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
DOOMIPKP_00747	7.82e-311	sun	2.1.1.176	-	J	ko:K03500	-	ko00000,ko01000,ko03009	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
DOOMIPKP_00748	1.98e-180	stp	3.1.3.16	-	T	ko:K20074	-	ko00000,ko01000,ko01009	phosphatase
DOOMIPKP_00749	0.0	prkC	2.7.11.1	-	KLT	ko:K08884,ko:K12132	-	ko00000,ko01000,ko01001	serine threonine protein kinase
DOOMIPKP_00750	3.75e-212	rsgA	3.1.3.100	-	S	ko:K06949	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000,ko03009	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
DOOMIPKP_00751	2.61e-154	rpe	5.1.3.1	-	G	ko:K01783	ko00030,ko00040,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the ribulose-phosphate 3-epimerase family
DOOMIPKP_00752	7.76e-160	thiN	2.7.6.2	-	H	ko:K00949	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000	thiamine pyrophosphokinase
DOOMIPKP_00753	1.33e-35	rpmB	-	-	J	ko:K02902	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL28 family
DOOMIPKP_00754	8.29e-75	yloU	-	-	S	-	-	-	Asp23 family, cell envelope-related function
DOOMIPKP_00755	0.0	yloV	-	-	S	ko:K07030	-	ko00000	DAK2 domain fusion protein YloV
DOOMIPKP_00756	0.0	recG	3.6.4.12	-	L	ko:K03655	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
DOOMIPKP_00757	6.39e-234	plsX	2.3.1.15	-	I	ko:K03621	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
DOOMIPKP_00758	1.08e-47	acpP	-	-	IQ	ko:K02078	-	ko00000,ko00001	Carrier of the growing fatty acid chain in fatty acid biosynthesis
DOOMIPKP_00759	1.42e-244	oppD	-	-	P	ko:K02031,ko:K15583	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
DOOMIPKP_00760	3.27e-229	oppF	-	-	P	ko:K02032	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
DOOMIPKP_00761	1.6e-220	oppB	-	-	P	ko:K02033,ko:K02034	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
DOOMIPKP_00762	1.77e-180	oppC5	-	-	P	ko:K02034	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
DOOMIPKP_00763	5.54e-08	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
DOOMIPKP_00764	0.0	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
DOOMIPKP_00765	0.0	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
DOOMIPKP_00766	2.8e-160	rnc	3.1.26.3	-	J	ko:K03685	ko03008,ko05205,map03008,map05205	ko00000,ko00001,ko01000,ko03009,ko03019,ko03036	Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
DOOMIPKP_00767	0.0	smc	-	-	D	ko:K03529	-	ko00000,ko03036	Required for chromosome condensation and partitioning
DOOMIPKP_00768	6.02e-229	ftsY	-	-	U	ko:K03110	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
DOOMIPKP_00769	0.0	pepD2	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
DOOMIPKP_00770	4.7e-08	-	-	-	-	-	-	-	-
DOOMIPKP_00771	3.13e-171	cysA	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
DOOMIPKP_00772	0.0	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	FtsX-like permease family
DOOMIPKP_00773	0.0	ctrA	-	-	E	ko:K03294	-	ko00000	amino acid
DOOMIPKP_00774	2.75e-72	ylxM	-	-	S	ko:K09787	-	ko00000	Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
DOOMIPKP_00775	1.63e-290	ffh	3.6.5.4	-	U	ko:K03106	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko01000,ko02044	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
DOOMIPKP_00776	6.78e-60	rpsP	-	-	J	ko:K02959	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Belongs to the bacterial ribosomal protein bS16 family
DOOMIPKP_00777	3.45e-121	rimM	-	-	J	ko:K02860	-	ko00000,ko03009	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
DOOMIPKP_00778	6.91e-175	trmD	2.1.1.228	-	J	ko:K00554	-	ko00000,ko01000,ko03016	Belongs to the RNA methyltransferase TrmD family
DOOMIPKP_00779	1.64e-74	rplS	-	-	J	ko:K02884	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
DOOMIPKP_00780	5.4e-274	-	-	-	S	-	-	-	SLAP domain
DOOMIPKP_00781	6.91e-156	ung2	3.2.2.27	-	L	ko:K21929	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Uracil-DNA glycosylase
DOOMIPKP_00782	3.41e-185	-	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase family
DOOMIPKP_00783	9.86e-146	lexA	3.4.21.88	-	K	ko:K01356	-	ko00000,ko00002,ko01000,ko01002,ko03400	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
DOOMIPKP_00784	4.16e-51	ynzC	-	-	S	-	-	-	UPF0291 protein
DOOMIPKP_00785	6.43e-41	XK26_06720	-	-	S	ko:K09976	-	ko00000	Uncharacterised protein family (UPF0154)
DOOMIPKP_00786	0.0	mdlA	-	-	V	ko:K06148,ko:K18889	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
DOOMIPKP_00787	0.0	mdlB	-	-	V	ko:K06147,ko:K18890	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
DOOMIPKP_00788	0.0	pepO	-	-	O	ko:K07386	-	ko00000,ko01000,ko01002	Peptidase family M13
DOOMIPKP_00789	2.57e-38	npr	1.11.1.1	-	C	ko:K05910	-	ko00000,ko01000	NADH oxidase
DOOMIPKP_00790	5.99e-111	dps	-	-	P	ko:K04047	-	ko00000,ko03036	Belongs to the Dps family
DOOMIPKP_00791	0.0	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
DOOMIPKP_00792	6.16e-178	-	-	-	S	-	-	-	SLAP domain
DOOMIPKP_00793	7.54e-126	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
DOOMIPKP_00794	1.65e-288	cfa	2.1.1.79	-	M	ko:K00574	-	ko00000,ko01000	cyclopropane-fatty-acyl-phospholipid synthase
DOOMIPKP_00795	3.6e-146	plsC	2.3.1.51	-	I	ko:K00655	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Acyltransferase
DOOMIPKP_00796	7e-243	yabB	2.1.1.223	-	L	ko:K07461,ko:K15460	-	ko00000,ko01000,ko03016	Methyltransferase small domain
DOOMIPKP_00797	2.21e-180	rpsB	-	-	J	ko:K02967	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uS2 family
DOOMIPKP_00798	4.33e-236	tsf	-	-	J	ko:K02357	-	ko00000,ko03012,ko03029	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
DOOMIPKP_00799	5.86e-168	pyrH	2.7.4.22	-	F	ko:K09903	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphorylation of UMP to UDP
DOOMIPKP_00800	1.22e-121	frr	-	-	J	ko:K02838	-	ko00000,ko03012	Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
DOOMIPKP_00801	2.6e-177	uppS	2.5.1.31	-	H	ko:K00806	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
DOOMIPKP_00802	2.88e-183	cdsA	2.7.7.41	-	I	ko:K00981	ko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070	ko00000,ko00001,ko00002,ko01000	Belongs to the CDS family
DOOMIPKP_00803	2.59e-253	rseP	-	-	M	ko:K11749	ko02024,ko04112,map02024,map04112	ko00000,ko00001,ko01000,ko01002	zinc metalloprotease
DOOMIPKP_00804	0.0	proS	6.1.1.15	-	J	ko:K01881	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
DOOMIPKP_00805	0.0	polC	2.7.7.7	-	L	ko:K03763	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
DOOMIPKP_00806	3.4e-108	rimP	-	-	J	ko:K09748	-	ko00000,ko03009	Required for maturation of 30S ribosomal subunits
DOOMIPKP_00807	1.47e-253	nusA	-	-	K	ko:K02600	-	ko00000,ko03009,ko03021	Participates in both transcription termination and antitermination
DOOMIPKP_00808	3.75e-63	ylxR	-	-	K	ko:K07742	-	ko00000	Protein of unknown function (DUF448)
DOOMIPKP_00809	6.56e-64	ylxQ	-	-	J	-	-	-	ribosomal protein
DOOMIPKP_00810	0.0	infB	-	-	J	ko:K02519	-	ko00000,ko03012,ko03029	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
DOOMIPKP_00811	2.88e-80	rbfA	-	-	J	ko:K02834	-	ko00000,ko03009	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
DOOMIPKP_00812	4.2e-201	truB	5.4.99.25	-	J	ko:K03177,ko:K03483	-	ko00000,ko01000,ko03000,ko03016	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
DOOMIPKP_00813	1.31e-223	ribF	2.7.1.26, 2.7.7.2	-	H	ko:K11753	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Belongs to the ribF family
DOOMIPKP_00814	2.99e-247	hrcA	-	-	K	ko:K03705	-	ko00000,ko03000	Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
DOOMIPKP_00815	1.07e-108	grpE	-	-	O	ko:K03687	-	ko00000,ko03029,ko03110	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
DOOMIPKP_00816	0.0	dnaK	-	-	O	ko:K04043	ko03018,ko04212,ko05152,map03018,map04212,map05152	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	Heat shock 70 kDa protein
DOOMIPKP_00817	9.75e-277	dnaJ	-	-	O	ko:K03686	-	ko00000,ko03029,ko03110	ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
DOOMIPKP_00818	0.0	lepA	-	-	M	ko:K03596	ko05134,map05134	ko00000,ko00001	Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
DOOMIPKP_00819	7e-131	srtA	3.4.22.70	-	M	ko:K07284	-	ko00000,ko01000,ko01002,ko01011	sortase family
DOOMIPKP_00820	0.0	recJ	-	-	L	ko:K07462	ko03410,ko03430,ko03440,map03410,map03430,map03440	ko00000,ko00001,ko01000,ko03400	Single-stranded-DNA-specific exonuclease RecJ
DOOMIPKP_00821	1.15e-121	apt	2.4.2.7	-	F	ko:K00759	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000,ko04147	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
DOOMIPKP_00822	1.61e-119	-	-	-	S	-	-	-	Phage integrase family
DOOMIPKP_00830	6.24e-42	-	-	-	K	-	-	-	Cro/C1-type HTH DNA-binding domain
DOOMIPKP_00831	1.09e-30	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
DOOMIPKP_00832	1.95e-129	-	-	-	S	-	-	-	DNA binding
DOOMIPKP_00834	7.67e-43	-	-	-	-	-	-	-	-
DOOMIPKP_00836	4.51e-56	-	-	-	-	-	-	-	-
DOOMIPKP_00837	7.55e-174	-	-	-	S	-	-	-	Protein of unknown function (DUF1351)
DOOMIPKP_00838	1.25e-173	-	-	-	S	-	-	-	ERF superfamily
DOOMIPKP_00839	4.3e-119	-	-	-	L	-	-	-	Helix-turn-helix domain
DOOMIPKP_00840	9.68e-22	-	-	-	-	-	-	-	-
DOOMIPKP_00845	9.35e-47	-	-	-	L	ko:K07474	-	ko00000	Terminase small subunit
DOOMIPKP_00846	5.39e-159	-	-	-	L	ko:K06909	-	ko00000	Phage terminase, large subunit
DOOMIPKP_00847	1.31e-174	-	-	-	S	-	-	-	Phage portal protein, SPP1 Gp6-like
DOOMIPKP_00848	1.48e-146	-	-	-	S	-	-	-	Phage minor capsid protein 2
DOOMIPKP_00850	1.36e-27	-	-	-	S	-	-	-	Phage minor structural protein GP20
DOOMIPKP_00851	5.46e-130	-	-	-	S	-	-	-	T=7 icosahedral viral capsid
DOOMIPKP_00858	3.07e-44	-	-	-	S	-	-	-	Bacteriophage Gp15 protein
DOOMIPKP_00859	2.17e-168	-	-	-	L	-	-	-	Phage tail tape measure protein TP901
DOOMIPKP_00863	1.44e-44	-	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase
DOOMIPKP_00864	9.03e-175	-	-	-	L	-	-	-	COG2826 Transposase and inactivated derivatives, IS30 family
DOOMIPKP_00866	2.5e-42	-	-	-	-	-	-	-	-
DOOMIPKP_00867	4.2e-14	-	-	-	-	-	-	-	-
DOOMIPKP_00868	7.25e-50	-	-	-	S	-	-	-	Bacteriophage holin of superfamily 6 (Holin_LLH)
DOOMIPKP_00869	1.61e-136	-	-	-	M	-	-	-	hydrolase, family 25
DOOMIPKP_00870	1.58e-253	-	1.8.1.7	-	C	ko:K00383,ko:K21739	ko00480,ko04918,map00480,map04918	ko00000,ko00001,ko01000	Pyridine nucleotide-disulfide oxidoreductase
DOOMIPKP_00871	1.53e-268	-	-	-	S	ko:K09963	-	ko00000	Bacterial protein of unknown function (DUF871)
DOOMIPKP_00872	0.000168	ybhL	-	-	S	ko:K06890	-	ko00000	Belongs to the BI1 family
DOOMIPKP_00873	1.89e-52	ybhL	-	-	S	ko:K06890	-	ko00000	Belongs to the BI1 family
DOOMIPKP_00874	6.43e-33	-	-	-	S	-	-	-	Metal binding domain of Ada
DOOMIPKP_00875	0.0	-	-	-	P	-	-	-	Cation transporter/ATPase, N-terminus
DOOMIPKP_00876	1.5e-177	lysR5	-	-	K	-	-	-	LysR substrate binding domain
DOOMIPKP_00877	9.61e-274	arcA	3.5.3.6	-	E	ko:K01478	ko00220,ko01100,ko01110,ko01130,map00220,map01100,map01110,map01130	ko00000,ko00001,ko01000	Arginine
DOOMIPKP_00878	4.49e-52	argF	2.1.3.3	-	E	ko:K00611	ko00220,ko01100,ko01110,ko01130,ko01230,map00220,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
DOOMIPKP_00879	1.24e-129	arcC	2.7.2.2	-	E	ko:K00926	ko00220,ko00230,ko00910,ko01100,ko01120,ko01200,map00220,map00230,map00910,map01100,map01120,map01200	ko00000,ko00001,ko01000	Belongs to the carbamate kinase family
DOOMIPKP_00880	0.0	-	-	-	S	-	-	-	Uncharacterised protein family (UPF0236)
DOOMIPKP_00881	2.22e-125	citX	2.7.7.61	-	HI	ko:K05964	ko02020,map02020	ko00000,ko00001,ko01000	Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase
DOOMIPKP_00882	3.08e-287	-	-	-	S	-	-	-	Sterol carrier protein domain
DOOMIPKP_00883	4.04e-29	-	-	-	-	-	-	-	-
DOOMIPKP_00884	8.43e-141	-	-	-	K	-	-	-	LysR substrate binding domain
DOOMIPKP_00885	1.13e-126	-	-	-	-	-	-	-	-
DOOMIPKP_00886	1.69e-152	-	-	-	G	-	-	-	Antibiotic biosynthesis monooxygenase
DOOMIPKP_00887	9.22e-159	-	-	-	-	-	-	-	-
DOOMIPKP_00888	0.0	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
DOOMIPKP_00889	0.0	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
DOOMIPKP_00890	4.55e-93	-	-	-	-	-	-	-	-
DOOMIPKP_00891	8.71e-31	-	-	-	G	-	-	-	Ribose/Galactose Isomerase
DOOMIPKP_00892	1.32e-92	-	-	-	K	-	-	-	sequence-specific DNA binding
DOOMIPKP_00893	1.4e-53	-	-	-	S	-	-	-	SnoaL-like domain
DOOMIPKP_00894	0.0	-	-	-	L	-	-	-	PLD-like domain
DOOMIPKP_00895	4.62e-131	yrgI	5.4.2.11	-	G	ko:K01834	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Histidine phosphatase superfamily (branch 1)
DOOMIPKP_00896	0.0	lysC	2.7.2.4	-	E	ko:K00928	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the aspartokinase family
DOOMIPKP_00897	0.0	thrC	4.2.3.1	-	E	ko:K01733	ko00260,ko00750,ko01100,ko01110,ko01120,ko01230,map00260,map00750,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Threonine synthase
DOOMIPKP_00898	2.95e-283	hom	1.1.1.3	-	E	ko:K00003	ko00260,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00270,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	homoserine dehydrogenase
DOOMIPKP_00899	4.53e-204	thrB	2.7.1.39	-	F	ko:K00872	ko00260,ko01100,ko01110,ko01120,ko01230,map00260,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
DOOMIPKP_00900	1.91e-151	-	-	-	-	-	-	-	-
DOOMIPKP_00901	5.96e-207	yitT	-	-	S	-	-	-	Uncharacterised 5xTM membrane BCR, YitT family COG1284
DOOMIPKP_00903	6.57e-141	msrA	1.8.4.11, 1.8.4.12	-	O	ko:K07304,ko:K12267	-	ko00000,ko01000	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
DOOMIPKP_00904	1.71e-150	-	-	-	S	-	-	-	Peptidase family M23
DOOMIPKP_00906	5.68e-30	-	-	-	-	-	-	-	-
DOOMIPKP_00907	0.0	cas3	-	-	L	ko:K07012	-	ko00000,ko01000,ko02048	CRISPR-associated helicase cas3
DOOMIPKP_00908	0.0	casA	-	-	L	ko:K19123	-	ko00000,ko02048	the current gene model (or a revised gene model) may contain a frame shift
DOOMIPKP_00909	1.25e-140	-	-	-	S	ko:K19046	-	ko00000,ko02048	CRISPR-associated protein Cse2 (CRISPR_cse2)
DOOMIPKP_00910	4.82e-254	casC	-	-	L	ko:K19124	-	ko00000,ko02048	CT1975-like protein
DOOMIPKP_00911	7.43e-171	casD	-	-	S	ko:K19125	-	ko00000,ko02048	CRISPR-associated protein (Cas_Cas5)
DOOMIPKP_00912	5.71e-159	casE	-	-	S	ko:K19126	-	ko00000,ko02048	CRISPR_assoc
DOOMIPKP_00913	2.88e-221	cas1	-	-	L	ko:K15342	-	ko00000,ko02048,ko03400	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
DOOMIPKP_00914	9.23e-214	cas2	-	-	L	ko:K09951	-	ko00000,ko02048	CRISPR-associated protein (Cas_Cas2CT1978)
DOOMIPKP_00915	6.94e-199	yqfL	2.7.11.33, 2.7.4.28	-	F	ko:K09773	-	ko00000,ko01000	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
DOOMIPKP_00916	4.83e-30	rpsU	-	-	J	ko:K02970	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bS21 family
DOOMIPKP_00917	3.09e-92	yqeY	-	-	S	ko:K09117	-	ko00000	YqeY-like protein
DOOMIPKP_00918	1.74e-224	phoH	-	-	T	ko:K06217	-	ko00000	phosphate starvation-inducible protein PhoH
DOOMIPKP_00919	2.07e-128	ybeY	-	-	S	ko:K07042	-	ko00000,ko03009	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
DOOMIPKP_00920	1.37e-216	era	-	-	S	ko:K03595	-	ko00000,ko03009,ko03029	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
DOOMIPKP_00921	7.41e-176	recO	-	-	L	ko:K03584	ko03440,map03440	ko00000,ko00001,ko03400	Involved in DNA repair and RecF pathway recombination
DOOMIPKP_00922	9.03e-229	glyQ	6.1.1.14	-	J	ko:K01878	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	glycyl-tRNA synthetase alpha subunit
DOOMIPKP_00923	0.0	glyS	6.1.1.14	-	J	ko:K01879	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Glycyl-tRNA synthetase beta subunit
DOOMIPKP_00924	0.0	dnaG	-	-	L	ko:K02316	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
DOOMIPKP_00925	9e-255	sigA	-	-	K	ko:K03086	-	ko00000,ko03021	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
DOOMIPKP_00926	1.77e-165	-	-	-	S	-	-	-	Peptidase family M23
DOOMIPKP_00927	5.37e-106	-	3.6.1.55	-	F	ko:K03574	-	ko00000,ko01000,ko03400	NUDIX domain
DOOMIPKP_00928	2.3e-158	trmK	2.1.1.217	-	S	ko:K06967	-	ko00000,ko01000,ko03016	SAM-dependent methyltransferase
DOOMIPKP_00929	2.83e-196	yqfO	-	-	S	-	-	-	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
DOOMIPKP_00930	5.76e-307	pepT	3.4.11.4	-	E	ko:K01258	-	ko00000,ko01000,ko01002	Cleaves the N-terminal amino acid of tripeptides
DOOMIPKP_00931	1.85e-82	lexA	-	-	K	ko:K07979	-	ko00000,ko03000	Transcriptional regulator, GntR family
DOOMIPKP_00932	1.33e-161	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
DOOMIPKP_00933	7.94e-156	-	-	-	-	-	-	-	-
DOOMIPKP_00934	1.45e-130	-	-	-	-	-	-	-	-
DOOMIPKP_00935	4.74e-151	-	-	-	-	-	-	-	-
DOOMIPKP_00936	1.98e-52	ybjQ	-	-	S	-	-	-	Belongs to the UPF0145 family
DOOMIPKP_00937	4.24e-37	-	-	-	-	-	-	-	-
DOOMIPKP_00938	1.27e-133	lepB	3.4.21.89	-	U	ko:K03100	ko02024,ko03060,map02024,map03060	ko00000,ko00001,ko01000,ko01002	Belongs to the peptidase S26 family
DOOMIPKP_00939	5.93e-186	-	-	-	-	-	-	-	-
DOOMIPKP_00940	2.09e-213	-	-	-	-	-	-	-	-
DOOMIPKP_00941	0.0	rsmF	-	-	J	-	-	-	NOL1 NOP2 sun family protein
DOOMIPKP_00942	1.28e-150	-	3.1.3.102, 3.1.3.104, 3.1.3.23	-	G	ko:K07757,ko:K20861	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Sucrose-6F-phosphate phosphohydrolase
DOOMIPKP_00943	1.7e-236	fni	5.3.3.2	-	C	ko:K01823	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
DOOMIPKP_00944	1.91e-260	mvaK2	2.7.4.2	-	I	ko:K00938	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	phosphomevalonate kinase
DOOMIPKP_00945	1.01e-228	mvaD	4.1.1.33	-	I	ko:K01597	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	diphosphomevalonate decarboxylase
DOOMIPKP_00946	2.59e-174	mvk	2.7.1.36	-	I	ko:K00869	ko00900,ko01100,ko01110,ko01130,ko04146,map00900,map01100,map01110,map01130,map04146	ko00000,ko00001,ko00002,ko01000	GHMP kinases N terminal domain
DOOMIPKP_00947	0.0	rexB	3.6.4.12	-	L	ko:K16899	-	ko00000,ko01000,ko03400	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
DOOMIPKP_00948	0.0	addA	3.6.4.12	-	L	ko:K16898	-	ko00000,ko01000,ko03400	ATP-dependent helicase nuclease subunit A
DOOMIPKP_00949	0.0	dinG	3.6.4.12	-	L	ko:K03722	-	ko00000,ko01000,ko03400	helicase involved in DNA repair and perhaps also replication
DOOMIPKP_00950	4.08e-117	ypmB	-	-	S	-	-	-	Protein conserved in bacteria
DOOMIPKP_00951	0.0	asnS	6.1.1.22	-	J	ko:K01893	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Asparaginyl-tRNA synthetase
DOOMIPKP_00952	6.91e-149	dnaD	-	-	L	ko:K02086	-	ko00000	DnaD domain protein
DOOMIPKP_00953	3.18e-147	nth	4.2.99.18	-	L	ko:K10773	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
DOOMIPKP_00954	0.0	ponA	2.4.1.129, 3.4.16.4	GT51	M	ko:K05366	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01003,ko01011	penicillin-binding protein 1A
DOOMIPKP_00955	8.47e-152	recU	-	-	L	ko:K03700	-	ko00000,ko03400	Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
DOOMIPKP_00956	1.96e-138	ypsA	-	-	S	-	-	-	Belongs to the UPF0398 family
DOOMIPKP_00957	1.85e-90	gpsB	-	-	D	-	-	-	Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
DOOMIPKP_00958	5.87e-278	ypsC	-	-	L	ko:K07444	-	ko00000,ko01000	Belongs to the methyltransferase superfamily
DOOMIPKP_00959	7.87e-308	cpdA	-	-	S	-	-	-	Calcineurin-like phosphoesterase
DOOMIPKP_00960	9.67e-104	-	-	-	-	-	-	-	-
DOOMIPKP_00961	9.91e-150	-	3.6.1.66	-	F	ko:K02428	ko00230,map00230	ko00000,ko00001,ko01000	Ham1 family
DOOMIPKP_00962	3.56e-47	-	-	-	-	-	-	-	-
DOOMIPKP_00963	2.39e-82	-	-	-	-	-	-	-	-
DOOMIPKP_00966	7.5e-160	-	-	-	-	-	-	-	-
DOOMIPKP_00967	1.19e-136	pncA	-	-	Q	-	-	-	Isochorismatase family
DOOMIPKP_00968	8.64e-50	-	-	-	-	-	-	-	-
DOOMIPKP_00969	2.44e-267	snf	-	-	KL	-	-	-	domain protein
DOOMIPKP_00970	1.28e-130	snf	-	-	KL	-	-	-	domain protein
DOOMIPKP_00971	1.45e-196	snf	-	-	KL	-	-	-	domain protein
DOOMIPKP_00972	9.39e-141	plsY	2.3.1.15	-	I	ko:K08591	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
DOOMIPKP_00973	0.0	parE	-	-	L	ko:K02622	-	ko00000,ko01000,ko02048,ko03032,ko03036	Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
DOOMIPKP_00974	0.0	parC	-	-	L	ko:K02621	-	ko00000,ko01000,ko02048,ko03032,ko03036	Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
DOOMIPKP_00975	1.11e-234	-	-	-	K	-	-	-	Transcriptional regulator
DOOMIPKP_00976	8.96e-223	ppaC	3.6.1.1	-	C	ko:K15986	ko00190,map00190	ko00000,ko00001,ko01000	inorganic pyrophosphatase
DOOMIPKP_00977	2.45e-146	ppiB	5.2.1.8	-	G	ko:K03768	-	ko00000,ko01000,ko03110	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
DOOMIPKP_00978	5.03e-76	-	-	-	K	-	-	-	Helix-turn-helix domain
DOOMIPKP_00979	6.59e-160	-	-	-	S	-	-	-	Protein of unknown function (DUF1275)
DOOMIPKP_00980	7.55e-53	-	-	-	S	-	-	-	Transglycosylase associated protein
DOOMIPKP_00981	4.08e-270	-	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
DOOMIPKP_00982	4.36e-142	XK27_00160	-	-	S	-	-	-	Domain of unknown function (DUF5052)
DOOMIPKP_00983	8.68e-90	-	-	-	-	-	-	-	-
DOOMIPKP_00984	6.14e-259	xerS	-	-	L	ko:K03733	-	ko00000,ko03036	Belongs to the 'phage' integrase family
DOOMIPKP_00985	0.0	mutS1	-	-	L	ko:K07456	ko03430,map03430	ko00000,ko00001,ko03400	Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
DOOMIPKP_00986	1.4e-205	-	-	-	S	-	-	-	EDD domain protein, DegV family
DOOMIPKP_00987	2.06e-88	-	-	-	-	-	-	-	-
DOOMIPKP_00988	0.0	FbpA	-	-	K	-	-	-	Fibronectin-binding protein
DOOMIPKP_00989	0.0	carB1	6.3.5.5	-	F	ko:K01955	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthase
DOOMIPKP_00990	3.39e-254	carA	6.3.5.5	-	F	ko:K01956	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthetase glutamine chain
DOOMIPKP_00991	2.67e-220	rluD	5.4.99.23	-	J	ko:K06180	-	ko00000,ko01000,ko03009	Responsible for synthesis of pseudouridine from uracil
DOOMIPKP_00992	3.16e-102	lspA	3.4.23.36	-	MU	ko:K03101	ko03060,map03060	ko00000,ko00001,ko01000,ko01002	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
DOOMIPKP_00993	0.0	fhs	6.3.4.3	-	F	ko:K01938	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Belongs to the formate--tetrahydrofolate ligase family
DOOMIPKP_00994	1.61e-70	-	-	-	-	-	-	-	-
DOOMIPKP_00995	2.66e-197	psd	4.1.1.65	-	I	ko:K01613	ko00564,ko01100,ko01110,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Belongs to the phosphatidylserine decarboxylase family
DOOMIPKP_00996	3.41e-165	-	-	-	L	-	-	-	Domain of unknown function (DUF4368)
DOOMIPKP_00997	4.35e-259	-	-	-	D	-	-	-	COG COG3843 Type IV secretory pathway, VirD2 components (relaxase)
DOOMIPKP_00998	8.68e-79	-	-	-	D	-	-	-	nuclear chromosome segregation
DOOMIPKP_00999	6.53e-89	-	-	-	S	-	-	-	Bacterial mobilisation protein (MobC)
DOOMIPKP_01000	2.25e-37	-	-	-	-	-	-	-	-
DOOMIPKP_01001	0.0	-	-	-	J	-	-	-	Elongation factor G, domain IV
DOOMIPKP_01002	5.55e-80	psd	4.1.1.65	-	I	ko:K01613	ko00564,ko01100,ko01110,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Belongs to the phosphatidylserine decarboxylase family
DOOMIPKP_01004	6.62e-102	-	-	-	S	ko:K07126	-	ko00000	Sel1-like repeats.
DOOMIPKP_01005	2.88e-136	-	-	-	S	-	-	-	AAA domain
DOOMIPKP_01006	1.05e-232	-	-	-	-	-	-	-	-
DOOMIPKP_01007	9.64e-42	-	-	-	-	-	-	-	-
DOOMIPKP_01008	2.86e-102	-	-	-	S	-	-	-	HIRAN
DOOMIPKP_01009	8.21e-08	-	-	-	S	ko:K07126	-	ko00000	Sel1-like repeats.
DOOMIPKP_01011	1.2e-87	-	-	-	-	-	-	-	-
DOOMIPKP_01013	5.85e-169	mrr2	-	-	L	ko:K07448	-	ko00000,ko02048	restriction endonuclease
DOOMIPKP_01014	2.1e-92	-	-	-	L	ko:K07448	-	ko00000,ko02048	restriction endonuclease
DOOMIPKP_01015	0.0	-	3.1.21.3	-	V	ko:K01153	-	ko00000,ko01000,ko02048	EcoEI R protein C-terminal
DOOMIPKP_01016	1.04e-161	-	3.1.21.3	-	V	ko:K01154	-	ko00000,ko01000,ko02048	Type I restriction modification DNA specificity domain
DOOMIPKP_01017	4.07e-220	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
DOOMIPKP_01018	2.86e-96	-	3.1.21.3	-	V	ko:K01154	-	ko00000,ko01000,ko02048	Type I restriction modification DNA specificity domain
DOOMIPKP_01019	2.2e-41	hsdS	2.1.1.72, 3.1.21.3	-	V	ko:K01154,ko:K07317	-	ko00000,ko01000,ko02048	type I restriction modification DNA specificity domain
DOOMIPKP_01020	0.0	-	2.1.1.72	-	V	ko:K03427	-	ko00000,ko01000,ko02048	type I restriction-modification system
DOOMIPKP_01022	6.81e-23	-	-	-	S	ko:K07052	-	ko00000	CAAX amino terminal protease
DOOMIPKP_01023	4.92e-06	-	-	-	S	-	-	-	SLAP domain
DOOMIPKP_01025	1.77e-303	XK27_01810	-	-	S	-	-	-	Calcineurin-like phosphoesterase
DOOMIPKP_01026	1.43e-80	-	-	-	S	ko:K07006	-	ko00000	Pyridoxamine 5'-phosphate oxidase
DOOMIPKP_01027	1.65e-303	-	-	-	G	ko:K02027	-	ko00000,ko00002,ko02000	Bacterial extracellular solute-binding protein
DOOMIPKP_01029	0.0	treC	3.2.1.93	GH13	G	ko:K01226	ko00500,map00500	ko00000,ko00001,ko01000	Alpha amylase, catalytic domain protein
DOOMIPKP_01030	1.22e-89	treB	-	-	G	ko:K02755,ko:K02756,ko:K02757	ko02060,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
DOOMIPKP_01031	4.58e-85	spxA	-	-	K	ko:K16509	-	ko00000	Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
DOOMIPKP_01032	3.24e-241	-	-	-	L	ko:K07478	-	ko00000	AAA C-terminal domain
DOOMIPKP_01033	0.0	yqjE	3.4.11.14, 3.4.11.4	-	E	ko:K01258,ko:K01263	-	ko00000,ko01000,ko01002	Cleaves the N-terminal amino acid of tripeptides
DOOMIPKP_01034	3.45e-109	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
DOOMIPKP_01035	1.13e-291	-	-	-	S	-	-	-	Putative peptidoglycan binding domain
DOOMIPKP_01036	7.89e-124	-	-	-	S	-	-	-	ECF-type riboflavin transporter, S component
DOOMIPKP_01037	8.87e-127	pdxK	2.7.1.35	-	H	ko:K00868	ko00750,ko01100,map00750,map01100	ko00000,ko00001,ko01000	Phosphomethylpyrimidine kinase
DOOMIPKP_01038	9.19e-259	pbpX1	-	-	V	-	-	-	Beta-lactamase
DOOMIPKP_01039	1.12e-149	maa3	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	transferase hexapeptide repeat
DOOMIPKP_01040	3.21e-104	yvbK	-	-	K	-	-	-	COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
DOOMIPKP_01041	4.88e-147	-	-	-	I	-	-	-	Acid phosphatase homologues
DOOMIPKP_01042	1.07e-239	mmuM	2.1.1.10	-	H	ko:K00547	ko00270,ko01100,ko01110,map00270,map01100,map01110	ko00000,ko00001,ko01000	homocysteine S-methyltransferase
DOOMIPKP_01043	0.0	uvrA2	-	-	L	ko:K03701	ko03420,map03420	ko00000,ko00001,ko03400	excinuclease ABC, A subunit
DOOMIPKP_01044	3.6e-106	-	-	-	C	-	-	-	Flavodoxin
DOOMIPKP_01045	0.0	recQ	3.6.4.12	-	L	ko:K03654	ko03018,map03018	ko00000,ko00001,ko01000,ko03400	ATP-dependent DNA helicase RecQ
DOOMIPKP_01046	1.81e-313	ynbB	-	-	P	-	-	-	aluminum resistance
DOOMIPKP_01047	0.0	speA	4.1.1.17, 4.1.1.18, 4.1.1.19	-	E	ko:K01581,ko:K01582,ko:K01585	ko00310,ko00330,ko00480,ko00960,ko01100,ko01110,ko01130,map00310,map00330,map00480,map00960,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Orn/Lys/Arg decarboxylase, C-terminal domain
DOOMIPKP_01048	0.0	-	-	-	E	-	-	-	Amino acid permease
DOOMIPKP_01049	9.58e-122	-	-	-	C	-	-	-	Pyridoxamine 5'-phosphate oxidase
DOOMIPKP_01050	0.0	pepV	3.5.1.18	-	E	ko:K01270,ko:K01274,ko:K01439	ko00300,ko00480,ko01100,ko01120,ko01230,map00300,map00480,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000,ko01002	dipeptidase PepV
DOOMIPKP_01051	8.87e-106	ybgF	-	-	E	ko:K02205,ko:K03293,ko:K16235,ko:K16236	-	ko00000,ko02000	amino acid
DOOMIPKP_01052	1.25e-85	crcB	-	-	U	ko:K06199	-	ko00000,ko02000	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
DOOMIPKP_01053	9.28e-89	crcB1	-	-	U	ko:K06199	-	ko00000,ko02000	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
DOOMIPKP_01054	3.18e-196	-	-	-	L	-	-	-	Phage integrase, N-terminal SAM-like domain
DOOMIPKP_01055	3.77e-122	-	-	-	M	-	-	-	LysM domain protein
DOOMIPKP_01056	6.38e-59	-	-	-	S	-	-	-	aldo-keto reductase (NADP) activity
DOOMIPKP_01057	2.92e-98	-	-	-	C	-	-	-	Aldo keto reductase
DOOMIPKP_01058	3.83e-231	lacX	5.1.3.3	-	G	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Aldose 1-epimerase
DOOMIPKP_01059	8.06e-313	hslU	-	-	O	ko:K03667	-	ko00000,ko03110	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
DOOMIPKP_01060	4.67e-116	hslV	3.4.25.2	-	O	ko:K01419	-	ko00000,ko01000,ko01002	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
DOOMIPKP_01061	7.31e-181	xerC	-	-	D	ko:K03733,ko:K04763	-	ko00000,ko03036	Phage integrase, N-terminal SAM-like domain
DOOMIPKP_01062	5.88e-315	trmFO	2.1.1.74	-	J	ko:K04094	-	ko00000,ko01000,ko03016,ko03036	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
DOOMIPKP_01063	0.0	topA	5.99.1.2	-	L	ko:K03168	-	ko00000,ko01000,ko03032,ko03400	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
DOOMIPKP_01064	2.14e-195	dprA	-	-	LU	ko:K04096	-	ko00000	DNA protecting protein DprA
DOOMIPKP_01065	1e-168	rnhB	3.1.26.4	-	L	ko:K03470	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
DOOMIPKP_01066	9.12e-200	rbgA	-	-	S	ko:K14540	-	ko00000,ko03009	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
DOOMIPKP_01067	5.99e-228	nhaP4	-	-	P	ko:K03316	-	ko00000	Sodium proton antiporter
DOOMIPKP_01068	1.28e-88	-	-	-	P	-	-	-	NhaP-type Na H and K H
DOOMIPKP_01069	9.85e-49	yozE	-	-	S	-	-	-	Belongs to the UPF0346 family
DOOMIPKP_01070	8.63e-191	degV3	-	-	S	-	-	-	Uncharacterised protein, DegV family COG1307
DOOMIPKP_01071	1.8e-143	hlyIII	-	-	S	ko:K11068	-	ko00000,ko02042	protein, hemolysin III
DOOMIPKP_01072	5.13e-287	cca	2.7.7.72	-	J	ko:K00974	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
DOOMIPKP_01073	5.48e-204	XK27_10395	-	-	S	-	-	-	Uncharacterised 5xTM membrane BCR, YitT family COG1284
DOOMIPKP_01074	1.65e-112	-	3.4.21.96	-	S	ko:K01361	-	ko00000,ko01000,ko01002,ko03110	SLAP domain
DOOMIPKP_01075	6.15e-242	yagE	-	-	E	-	-	-	Amino acid permease
DOOMIPKP_01076	4.18e-191	-	2.3.1.81	-	V	ko:K00662	-	ko00000,ko01000,ko01504	Aminoglycoside 3-N-acetyltransferase
DOOMIPKP_01077	1.1e-183	-	-	-	F	-	-	-	Phosphorylase superfamily
DOOMIPKP_01078	2.38e-173	-	-	-	F	-	-	-	Phosphorylase superfamily
DOOMIPKP_01079	1.08e-84	-	-	-	F	-	-	-	NUDIX domain
DOOMIPKP_01080	8.58e-82	-	-	-	S	-	-	-	AAA domain
DOOMIPKP_01081	3.21e-129	-	-	-	S	-	-	-	F420-0:Gamma-glutamyl ligase
DOOMIPKP_01082	7.6e-74	codA	-	-	F	-	-	-	Cytidine and deoxycytidylate deaminase zinc-binding region
DOOMIPKP_01083	1.1e-69	yxaM	-	-	EGP	-	-	-	Major facilitator Superfamily
DOOMIPKP_01084	1.6e-117	yxaM	-	-	EGP	-	-	-	Major facilitator Superfamily
DOOMIPKP_01085	1.83e-93	-	-	-	S	-	-	-	Alpha/beta hydrolase family
DOOMIPKP_01086	2.95e-123	rimL	-	-	J	ko:K03817	-	ko00000,ko01000,ko03009	Acetyltransferase (GNAT) domain
DOOMIPKP_01087	0.0	-	-	-	-	-	-	-	-
DOOMIPKP_01088	8.77e-168	glsA	3.5.1.2	-	E	ko:K01425	ko00220,ko00250,ko00471,ko01100,ko04724,ko04727,ko04964,ko05206,ko05230,map00220,map00250,map00471,map01100,map04724,map04727,map04964,map05206,map05230	ko00000,ko00001,ko01000	Belongs to the glutaminase family
DOOMIPKP_01089	2.16e-169	-	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Tyrosine phosphatase family
DOOMIPKP_01090	1.04e-29	-	-	-	S	-	-	-	Protein of unknown function (DUF3923)
DOOMIPKP_01091	1.66e-74	-	-	-	-	-	-	-	-
DOOMIPKP_01092	1.06e-63	-	-	-	S	-	-	-	MazG-like family
DOOMIPKP_01093	6.56e-119	-	-	-	S	-	-	-	Protein of unknown function (DUF2785)
DOOMIPKP_01094	8.1e-238	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
DOOMIPKP_01096	1.69e-63	-	-	-	M	-	-	-	Plasmid recombination enzyme
DOOMIPKP_01097	1.19e-150	ermA	2.1.1.184	-	J	ko:K00561	-	br01600,ko00000,ko01000,ko01504,ko03009	Ribosomal RNA adenine dimethylases
DOOMIPKP_01098	7.99e-88	-	-	-	L	-	-	-	Protein involved in initiation of plasmid replication
DOOMIPKP_01099	8.1e-238	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
DOOMIPKP_01100	8.46e-30	-	-	-	S	-	-	-	Protein of unknown function (DUF2785)
DOOMIPKP_01101	2.72e-102	-	-	-	-	-	-	-	-
DOOMIPKP_01102	1.76e-136	yokL3	-	-	J	-	-	-	Acetyltransferase (GNAT) domain
DOOMIPKP_01103	0.0	-	-	-	V	-	-	-	ABC transporter transmembrane region
DOOMIPKP_01104	0.0	cls	-	-	I	ko:K06131	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
DOOMIPKP_01105	4.11e-292	XK27_05225	-	-	S	-	-	-	Tetratricopeptide repeat protein
DOOMIPKP_01106	8.21e-57	hup	-	-	L	ko:K03530	-	ko00000,ko03032,ko03036,ko03400	Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
DOOMIPKP_01107	1.34e-314	der	-	-	S	ko:K03977	-	ko00000,ko03009	GTPase that plays an essential role in the late steps of ribosome biogenesis
DOOMIPKP_01108	1.4e-281	rpsA	-	-	J	ko:K02945	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein S1
DOOMIPKP_01109	1.96e-148	cmk	2.7.4.25	-	F	ko:K00945	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the cytidylate kinase family. Type 1 subfamily
DOOMIPKP_01110	1.13e-41	-	-	-	M	-	-	-	Lysin motif
DOOMIPKP_01111	8.49e-146	ribU	-	-	U	-	-	-	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
DOOMIPKP_01112	1.56e-166	rluB	5.4.99.22	-	J	ko:K06178	-	ko00000,ko01000,ko03009	Belongs to the pseudouridine synthase RsuA family
DOOMIPKP_01113	1.07e-134	scpB	-	-	D	ko:K06024	-	ko00000,ko03036	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
DOOMIPKP_01114	1.81e-169	scpA	-	-	D	ko:K05896	-	ko00000,ko03036	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
DOOMIPKP_01115	7.97e-82	ribT	-	-	K	ko:K02859	-	ko00000	COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
DOOMIPKP_01116	1.73e-215	xerD	-	-	D	ko:K04763	-	ko00000,ko03036	recombinase XerD
DOOMIPKP_01117	4.41e-216	yitL	-	-	S	ko:K00243	-	ko00000	S1 domain
DOOMIPKP_01118	0.0	pyk	2.7.1.40	-	G	ko:K00873	ko00010,ko00230,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko04930,ko05165,ko05203,ko05230,map00010,map00230,map00620,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map04930,map05165,map05203,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Belongs to the pyruvate kinase family
DOOMIPKP_01119	5.46e-233	pfkA	2.7.1.11	-	F	ko:K00850	ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04152,ko05230,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04152,map05230	ko00000,ko00001,ko00002,ko01000,ko01009,ko03019	Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
DOOMIPKP_01120	0.0	dnaE	2.7.7.7	-	L	ko:K02337	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase
DOOMIPKP_01121	1.43e-174	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
DOOMIPKP_01122	1.25e-38	-	-	-	S	-	-	-	Protein of unknown function (DUF2929)
DOOMIPKP_01123	0.0	yfkN	3.1.3.6, 3.1.4.16	-	F	ko:K01119	ko00230,ko00240,map00230,map00240	ko00000,ko00001,ko01000	Belongs to the 5'-nucleotidase family
DOOMIPKP_01124	5.14e-38	rpmF	-	-	J	ko:K02911	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Belongs to the bacterial ribosomal protein bL32 family
DOOMIPKP_01125	3.57e-47	-	-	-	S	-	-	-	Lipopolysaccharide assembly protein A domain
DOOMIPKP_01126	1.23e-185	-	-	-	S	ko:K07124	-	ko00000	Belongs to the short-chain dehydrogenases reductases (SDR) family
DOOMIPKP_01127	1.75e-225	rnz	3.1.26.11	-	J	ko:K00784	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
DOOMIPKP_01128	0.0	oatA	-	-	I	-	-	-	Acyltransferase
DOOMIPKP_01129	1.88e-309	obg	-	-	S	ko:K03979	-	ko00000,ko01000,ko03009	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
DOOMIPKP_01130	0.0	uvrC	-	-	L	ko:K03703	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
DOOMIPKP_01131	3.87e-141	yngC	-	-	S	-	-	-	SNARE associated Golgi protein
DOOMIPKP_01132	0.0	yhdG	-	-	E	ko:K03294	-	ko00000	Amino Acid
DOOMIPKP_01133	1.33e-229	gyaR	1.1.1.26, 1.1.1.399, 1.1.1.95	-	CH	ko:K00015,ko:K00058	ko00260,ko00630,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00260,map00630,map00680,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
DOOMIPKP_01134	1.57e-191	yxeH	-	-	S	-	-	-	hydrolase
DOOMIPKP_01135	1.2e-199	-	-	-	S	-	-	-	reductase
DOOMIPKP_01136	5.43e-276	coaBC	4.1.1.36, 6.3.2.5	-	H	ko:K01598,ko:K13038	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
DOOMIPKP_01137	1.58e-283	aspC	-	-	E	ko:K00841	ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase
DOOMIPKP_01138	0.0	aspS	6.1.1.12	-	J	ko:K01876	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
DOOMIPKP_01139	4.28e-312	hisS	6.1.1.21	-	J	ko:K01892	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	histidyl-tRNA synthetase
DOOMIPKP_01140	1.8e-99	dtd	-	-	J	ko:K07560	-	ko00000,ko01000,ko03016	rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
DOOMIPKP_01141	0.0	relA	2.7.6.5	-	KT	ko:K00951	ko00230,map00230	ko00000,ko00001,ko01000	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
DOOMIPKP_01142	9.32e-81	-	-	-	-	-	-	-	-
DOOMIPKP_01143	4.8e-224	prmA	-	-	J	ko:K02687	-	ko00000,ko01000,ko03009	Ribosomal protein L11 methyltransferase
DOOMIPKP_01144	1.3e-115	ybaK	-	-	S	ko:K03976	-	ko00000,ko01000,ko03016	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
DOOMIPKP_01145	0.0	-	-	-	S	-	-	-	Putative threonine/serine exporter
DOOMIPKP_01146	1.05e-226	citR	-	-	K	-	-	-	Putative sugar-binding domain
DOOMIPKP_01147	5.06e-68	-	-	-	-	-	-	-	-
DOOMIPKP_01148	7.91e-14	-	-	-	-	-	-	-	-
DOOMIPKP_01149	8.1e-87	-	-	-	S	-	-	-	Domain of unknown function DUF1828
DOOMIPKP_01150	6.28e-124	-	-	-	S	ko:K16924	-	ko00000,ko00002,ko02000	UPF0397 protein
DOOMIPKP_01151	0.0	ykoD	-	-	P	ko:K16786,ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
DOOMIPKP_01152	1.49e-188	cbiQ	-	-	P	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	cobalt transport
DOOMIPKP_01153	1.46e-31	-	-	-	-	-	-	-	-
DOOMIPKP_01154	1.24e-93	ytwI	-	-	S	-	-	-	Protein of unknown function (DUF441)
DOOMIPKP_01155	0.0	citF	2.8.3.10	-	H	ko:K01643	ko02020,map02020	ko00000,ko00001,ko01000	Citrate (pro-3S)-lyase alpha chain
DOOMIPKP_01156	1.26e-214	citE	4.1.3.34	-	G	ko:K01644	ko02020,map02020	ko00000,ko00001,ko01000	Belongs to the HpcH HpaI aldolase family
DOOMIPKP_01157	4.59e-59	citD	-	-	C	ko:K01646	ko02020,map02020	ko00000,ko00001	Covalent carrier of the coenzyme of citrate lyase
DOOMIPKP_01158	7.66e-251	citC	6.2.1.22	-	H	ko:K01910	ko02020,map02020	ko00000,ko00001,ko01000	Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
DOOMIPKP_01159	3.31e-194	-	-	-	I	-	-	-	Alpha/beta hydrolase family
DOOMIPKP_01160	0.0	citP	-	-	P	ko:K03319	-	ko00000	Sodium:sulfate symporter transmembrane region
DOOMIPKP_01161	5.26e-171	-	-	-	H	-	-	-	Aldolase/RraA
DOOMIPKP_01162	0.0	pepC4	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	Peptidase C1-like family
DOOMIPKP_01163	1.66e-217	ldh	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	Belongs to the LDH MDH superfamily. LDH family
DOOMIPKP_01164	0.0	frdA	1.3.5.4	-	C	ko:K00244	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	ko00000,ko00001,ko00002,ko01000	FAD binding domain
DOOMIPKP_01165	0.0	fumC	4.2.1.2	-	C	ko:K01679	ko00020,ko00620,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko04934,ko05200,ko05211,map00020,map00620,map00720,map01100,map01110,map01120,map01130,map01200,map04934,map05200,map05211	ko00000,ko00001,ko00002,ko01000	Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
DOOMIPKP_01166	2.34e-122	metI	-	-	P	ko:K02072	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
DOOMIPKP_01167	5.74e-243	metN	-	-	P	ko:K02071	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
DOOMIPKP_01168	1.78e-204	metQ	-	-	P	ko:K02073	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the nlpA lipoprotein family
DOOMIPKP_01169	1.33e-225	-	-	-	F	ko:K15051	-	ko00000	DNA/RNA non-specific endonuclease
DOOMIPKP_01170	0.0	aha1	-	-	P	ko:K12952	-	ko00000,ko01000	E1-E2 ATPase
DOOMIPKP_01171	1.59e-118	folA	1.5.1.3	-	H	ko:K00287	ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523	ko00000,ko00001,ko00002,ko01000	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
DOOMIPKP_01172	6.03e-230	thyA	2.1.1.45	-	F	ko:K00560	ko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523	ko00000,ko00001,ko00002,ko01000	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
DOOMIPKP_01173	1.8e-316	yifK	-	-	E	ko:K03293	-	ko00000	Amino acid permease
DOOMIPKP_01174	0.0	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
DOOMIPKP_01175	0.0	-	-	-	P	ko:K06148	-	ko00000,ko02000	ABC transporter
DOOMIPKP_01176	8.9e-51	-	-	-	-	-	-	-	-
DOOMIPKP_01178	3.58e-162	-	-	-	S	-	-	-	Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
DOOMIPKP_01179	1.32e-112	-	-	-	K	-	-	-	GNAT family
DOOMIPKP_01180	4.69e-261	XK27_00915	-	-	C	-	-	-	Luciferase-like monooxygenase
DOOMIPKP_01181	1.52e-150	rbtT	-	-	P	ko:K13021	-	ko00000,ko02000	Major Facilitator Superfamily
DOOMIPKP_01184	4.96e-113	tpx	1.11.1.15	-	O	ko:K11065	-	ko00000,ko01000	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
DOOMIPKP_01185	0.0	-	-	-	L	-	-	-	Plasmid pRiA4b ORF-3-like protein
DOOMIPKP_01186	2.32e-313	brnQ	-	-	U	ko:K03311	-	ko00000	Component of the transport system for branched-chain amino acids
DOOMIPKP_01187	3.08e-153	yjhB	3.6.1.13	-	F	ko:K01515	ko00230,map00230	ko00000,ko00001,ko01000	NUDIX domain
DOOMIPKP_01188	9.83e-101	ltrA	-	-	S	-	-	-	Bacterial low temperature requirement A protein (LtrA)
DOOMIPKP_01189	8.15e-143	ybbB	-	-	S	-	-	-	Protein of unknown function (DUF1211)
DOOMIPKP_01190	0.0	yjcA	-	-	S	ko:K19350	ko02010,map02010	ko00000,ko00001,ko01504,ko02000	ABC transporter
DOOMIPKP_01191	1.17e-136	-	-	-	S	-	-	-	Alpha beta hydrolase
DOOMIPKP_01192	7.51e-203	-	-	-	K	-	-	-	Transcriptional regulator
DOOMIPKP_01193	1.04e-98	-	-	-	K	-	-	-	LytTr DNA-binding domain
DOOMIPKP_01194	2.51e-84	-	-	-	S	-	-	-	Protein of unknown function (DUF3021)
DOOMIPKP_01195	1.44e-184	dhrS4	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Oxidoreductase, short chain dehydrogenase reductase family protein
DOOMIPKP_01196	4.73e-259	ribD	1.1.1.193, 3.5.4.26	-	H	ko:K11752	ko00740,ko01100,ko01110,ko02024,map00740,map01100,map01110,map02024	ko00000,ko00001,ko00002,ko01000	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
DOOMIPKP_01197	2.25e-137	ribE	2.5.1.9	-	H	ko:K00793	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Riboflavin synthase
DOOMIPKP_01198	4.58e-291	ribBA	3.5.4.25, 4.1.99.12	-	H	ko:K14652	ko00740,ko00790,ko01100,ko01110,map00740,map00790,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate
DOOMIPKP_01199	1.15e-104	ribH	2.5.1.78	-	H	ko:K00794	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin
DOOMIPKP_01200	2.07e-165	-	2.7.7.49	-	L	ko:K00986	-	ko00000,ko01000	PFAM RNA-directed DNA polymerase (Reverse transcriptase)
DOOMIPKP_01201	9.04e-106	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
DOOMIPKP_01202	1.2e-261	-	-	-	G	-	-	-	Glycosyl hydrolases family 8
DOOMIPKP_01203	9.46e-315	-	-	-	M	-	-	-	Glycosyl transferase
DOOMIPKP_01205	1.28e-192	-	-	-	-	-	-	-	-
DOOMIPKP_01206	3.36e-77	-	-	-	M	-	-	-	Peptidase family M1 domain
DOOMIPKP_01207	5.69e-78	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
DOOMIPKP_01208	3.44e-299	mepA	-	-	V	ko:K18908	-	ko00000,ko00002,ko01504,ko02000	MATE efflux family protein
DOOMIPKP_01209	5.98e-100	-	-	-	K	ko:K03827	-	ko00000,ko01000	Acetyltransferase (GNAT) domain
DOOMIPKP_01210	1.44e-114	-	-	-	S	ko:K11621	ko02020,map02020	ko00000,ko00001	Putative adhesin
DOOMIPKP_01211	1.06e-126	-	-	-	S	ko:K07025	-	ko00000	Haloacid dehalogenase-like hydrolase
DOOMIPKP_01212	1.32e-13	-	1.3.5.4	-	C	ko:K00244	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	ko00000,ko00001,ko00002,ko01000	FMN_bind
DOOMIPKP_01213	8.4e-112	dps	-	-	P	ko:K04047	-	ko00000,ko03036	Belongs to the Dps family
DOOMIPKP_01214	2.46e-227	-	-	-	S	-	-	-	Conserved hypothetical protein 698
DOOMIPKP_01216	7.29e-245	cbh	3.5.1.24	-	M	ko:K01442	ko00120,ko00121,ko01100,map00120,map00121,map01100	ko00000,ko00001,ko01000	Linear amide C-N hydrolase, choloylglycine hydrolase family protein
DOOMIPKP_01217	8.23e-132	-	-	-	I	-	-	-	PAP2 superfamily
DOOMIPKP_01218	2.81e-193	-	-	-	S	-	-	-	Uncharacterised protein, DegV family COG1307
DOOMIPKP_01219	1.01e-310	eno	4.2.1.11	-	G	ko:K01689	ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066	ko00000,ko00001,ko00002,ko01000,ko03019,ko04147	Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
DOOMIPKP_01220	2.7e-126	-	-	-	S	-	-	-	Domain of unknown function (DUF4767)
DOOMIPKP_01221	8.05e-83	yfhC	-	-	C	-	-	-	nitroreductase
DOOMIPKP_01222	8.31e-12	yfhC	-	-	C	-	-	-	nitroreductase
DOOMIPKP_01223	4.08e-173	ypbG	2.7.1.2	-	GK	ko:K00845	ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	ROK family
DOOMIPKP_01224	0.0	pbg6	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
DOOMIPKP_01225	1.8e-284	pts23C	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
DOOMIPKP_01226	1.64e-153	-	-	-	K	ko:K03492	-	ko00000,ko03000	UTRA
DOOMIPKP_01227	0.0	-	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
DOOMIPKP_01228	4.04e-94	-	-	-	S	-	-	-	Domain of unknown function (DUF3284)
DOOMIPKP_01229	7.88e-79	celC	2.7.1.196, 2.7.1.205	-	G	ko:K02759	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose Cellobiose specific IIA subunit
DOOMIPKP_01230	1.32e-74	pts20B	2.7.1.196, 2.7.1.205	-	G	ko:K02760	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
DOOMIPKP_01231	3.28e-166	-	-	-	K	ko:K03492	-	ko00000,ko03000	UTRA domain
DOOMIPKP_01232	0.0	pbg4	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
DOOMIPKP_01233	6.11e-118	alkD	-	-	L	-	-	-	DNA alkylation repair enzyme
DOOMIPKP_01234	3.14e-226	iunH	3.2.2.1	-	F	ko:K01239	ko00230,ko00760,ko01100,map00230,map00760,map01100	ko00000,ko00001,ko01000	inosine-uridine preferring nucleoside hydrolase
DOOMIPKP_01235	9.44e-110	-	-	-	-	-	-	-	-
DOOMIPKP_01236	7.45e-54	-	-	-	C	-	-	-	FMN_bind
DOOMIPKP_01237	0.0	-	-	-	I	-	-	-	Protein of unknown function (DUF2974)
DOOMIPKP_01238	2.54e-250	pbpX1	-	-	V	-	-	-	Beta-lactamase
DOOMIPKP_01239	9.01e-255	asd	1.2.1.11	-	E	ko:K00133	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
DOOMIPKP_01240	2.7e-278	aspC	-	-	E	ko:K00841	ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase
DOOMIPKP_01241	6.89e-185	dapB	1.17.1.8	-	E	ko:K00215	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
DOOMIPKP_01242	3.66e-225	dapA	4.3.3.7	-	E	ko:K01714	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
DOOMIPKP_01243	1.4e-281	hipO	3.5.1.47	-	E	ko:K05823	ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000,ko01002	Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
DOOMIPKP_01244	8.62e-105	dapH	2.3.1.117, 2.3.1.89	-	E	ko:K00674,ko:K05822	ko00300,ko01100,ko01110,ko01120,ko01230,map00300,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
DOOMIPKP_01245	5.89e-314	lysA	4.1.1.20	-	E	ko:K01586	ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
DOOMIPKP_01246	0.0	lysC	2.7.2.4	-	E	ko:K00928	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the aspartokinase family
DOOMIPKP_01247	6.25e-246	dapF	5.1.1.7	-	E	ko:K01778	ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
DOOMIPKP_01248	2.35e-132	potE	-	-	E	-	-	-	Amino acid permease
DOOMIPKP_01249	1.9e-28	potE	-	-	E	-	-	-	Amino Acid
DOOMIPKP_01250	3.9e-137	engB	-	-	D	ko:K03978	-	ko00000,ko03036	Necessary for normal cell division and for the maintenance of normal septation
DOOMIPKP_01251	3.04e-297	clpX	-	-	O	ko:K03544	ko04112,map04112	ko00000,ko00001,ko03110	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
DOOMIPKP_01252	1.09e-292	tig	-	-	D	ko:K03545	-	ko00000	Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
DOOMIPKP_01253	4.06e-287	tuf	-	-	J	ko:K02358,ko:K15771	ko02010,map02010	ko00000,ko00001,ko00002,ko02000,ko03012,ko03029,ko04147	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
DOOMIPKP_01254	3.82e-191	-	-	-	-	-	-	-	-
DOOMIPKP_01255	0.0	rnjB	-	-	J	ko:K12574	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
DOOMIPKP_01256	7.11e-57	rpsO	-	-	J	ko:K02956	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
DOOMIPKP_01257	6.28e-47	rpsT	-	-	J	ko:K02968	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 16S ribosomal RNA
DOOMIPKP_01258	2.57e-226	holA	2.7.7.7	-	L	ko:K02340	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III delta subunit
DOOMIPKP_01259	0.0	comEC	-	-	S	ko:K02238	-	ko00000,ko00002,ko02044	Competence protein ComEC
DOOMIPKP_01260	6.35e-125	comEA	-	-	L	ko:K02237	-	ko00000,ko00002,ko02044	Competence protein ComEA
DOOMIPKP_01261	2.1e-246	lon	-	-	T	ko:K07177	ko02024,map02024	ko00000,ko00001,ko01002	Belongs to the peptidase S16 family
DOOMIPKP_01262	7.07e-107	coaD	2.7.7.3	-	H	ko:K00954	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
DOOMIPKP_01263	3.01e-125	rsmD	2.1.1.171	-	L	ko:K08316	-	ko00000,ko01000,ko03009	RNA methyltransferase, RsmD family
DOOMIPKP_01264	9.94e-71	ylbG	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2129)
DOOMIPKP_01265	6.76e-269	ftsW	-	-	D	ko:K03588	ko04112,map04112	ko00000,ko00001,ko02000,ko03036	Belongs to the SEDS family
DOOMIPKP_01266	0.0	typA	-	-	T	ko:K06207	-	ko00000	GTP-binding protein TypA
DOOMIPKP_01267	9.73e-132	def	3.5.1.88	-	J	ko:K01462	-	ko00000,ko01000	Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
DOOMIPKP_01268	1.09e-46	ykzG	-	-	S	-	-	-	Belongs to the UPF0356 family
DOOMIPKP_01269	0.0	rnjA	-	-	J	ko:K12574	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
DOOMIPKP_01270	3.43e-232	ytlR	-	-	I	-	-	-	Diacylglycerol kinase catalytic domain
DOOMIPKP_01271	0.0	-	-	-	L	-	-	-	Nuclease-related domain
DOOMIPKP_01272	0.0	recD2	3.1.11.5	-	L	ko:K03581	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
DOOMIPKP_01273	2.31e-148	-	-	-	S	-	-	-	repeat protein
DOOMIPKP_01274	4.7e-163	pgm	-	-	G	-	-	-	Phosphoglycerate mutase family
DOOMIPKP_01275	1.9e-279	mnmA	2.8.1.13	-	J	ko:K00566	ko04122,map04122	ko00000,ko00001,ko01000,ko03016	Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
DOOMIPKP_01276	2.97e-76	XK27_04120	-	-	S	-	-	-	Putative amino acid metabolism
DOOMIPKP_01277	1.62e-276	iscS	2.8.1.7	-	E	ko:K04487	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko02048,ko03016,ko03029	Aminotransferase class V
DOOMIPKP_01278	2.05e-163	mtnN	3.2.2.9	-	E	ko:K01243	ko00270,ko01100,ko01230,map00270,map01100,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
DOOMIPKP_01279	1.8e-57	-	-	-	-	-	-	-	-
DOOMIPKP_01280	1.27e-134	nudF	3.6.1.13	-	L	ko:K01515	ko00230,map00230	ko00000,ko00001,ko01000	ADP-ribose pyrophosphatase
DOOMIPKP_01281	2.32e-43	cspA	-	-	K	ko:K03704	-	ko00000,ko03000	'Cold-shock' DNA-binding domain
DOOMIPKP_01282	0.0	ileS	6.1.1.5	-	J	ko:K01870	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
DOOMIPKP_01283	1.55e-138	divIVA	-	-	D	ko:K04074	-	ko00000,ko03036	DivIVA domain protein
DOOMIPKP_01284	2.42e-193	ylmH	-	-	S	-	-	-	S4 domain protein
DOOMIPKP_01285	2.42e-60	yggT	-	-	S	ko:K02221	-	ko00000,ko02044	YGGT family
DOOMIPKP_01286	1.43e-96	sepF	-	-	D	ko:K09772	-	ko00000,ko03036	Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
DOOMIPKP_01287	9.61e-305	ftsZ	-	-	D	ko:K03531	ko04112,map04112	ko00000,ko00001,ko02048,ko03036,ko04812	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
DOOMIPKP_01288	1.54e-309	ftsA	-	-	D	ko:K03590	ko04112,map04112	ko00000,ko00001,ko03036,ko04812	Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
DOOMIPKP_01289	3.82e-195	divIB	-	-	D	ko:K03589	ko04112,map04112	ko00000,ko00001,ko03036	Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
DOOMIPKP_01290	1.16e-265	murG	2.4.1.227	GT28	M	ko:K02563	ko00550,ko01100,ko01502,ko04112,map00550,map01100,map01502,map04112	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
DOOMIPKP_01291	0.0	murD	6.3.2.9	-	M	ko:K01925	ko00471,ko00550,ko01100,map00471,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
DOOMIPKP_01292	3.12e-224	mraY	2.7.8.13	-	M	ko:K01000	ko00550,ko01100,ko01502,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
DOOMIPKP_01293	0.0	pbpX	-	-	M	ko:K08724,ko:K12552,ko:K12556	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01011	Penicillin-binding Protein
DOOMIPKP_01294	6.55e-72	ftsL	-	-	D	-	-	-	Cell division protein FtsL
DOOMIPKP_01295	4.45e-225	rsmH	2.1.1.199	-	J	ko:K03438	-	ko00000,ko01000,ko03009	Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
DOOMIPKP_01296	5.63e-102	mraZ	-	-	K	ko:K03925	-	ko00000	Belongs to the MraZ family
DOOMIPKP_01297	1.02e-72	-	-	-	S	-	-	-	Protein of unknown function (DUF3397)
DOOMIPKP_01298	1.4e-09	-	-	-	S	-	-	-	Protein of unknown function (DUF4044)
DOOMIPKP_01299	5.43e-122	mreD	-	-	-	ko:K03571	-	ko00000,ko03036	-
DOOMIPKP_01300	1.17e-188	mreC	-	-	M	ko:K03570	-	ko00000,ko03036	Involved in formation and maintenance of cell shape
DOOMIPKP_01301	8.26e-226	mreB	-	-	D	ko:K03569	-	ko00000,ko02048,ko03036,ko04812	cell shape determining protein MreB
DOOMIPKP_01302	1.07e-150	radC	-	-	L	ko:K03630	-	ko00000	DNA repair protein
DOOMIPKP_01303	3.7e-163	-	-	-	S	-	-	-	Haloacid dehalogenase-like hydrolase
DOOMIPKP_01304	5.78e-305	folC	6.3.2.12, 6.3.2.17	-	H	ko:K11754	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the folylpolyglutamate synthase family
DOOMIPKP_01305	0.0	valS	6.1.1.9	-	J	ko:K01873	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
DOOMIPKP_01306	9.51e-87	-	-	-	-	-	-	-	-
DOOMIPKP_01307	4.12e-56	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
DOOMIPKP_01308	1.04e-82	-	-	-	S	-	-	-	Phage derived protein Gp49-like (DUF891)
DOOMIPKP_01309	9.17e-20	-	1.3.5.4	-	C	ko:K00244	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	ko00000,ko00001,ko00002,ko01000	FAD binding domain
DOOMIPKP_01310	2.98e-213	-	-	-	K	-	-	-	Helix-turn-helix domain
DOOMIPKP_01311	2.11e-220	-	-	-	-	-	-	-	-
DOOMIPKP_01312	0.0	yoaB	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	P-type ATPase
DOOMIPKP_01313	1.76e-16	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
DOOMIPKP_01314	2.09e-59	-	-	-	-	-	-	-	-
DOOMIPKP_01315	3.33e-123	-	-	-	S	-	-	-	Protein of unknown function (DUF3990)
DOOMIPKP_01316	4.96e-219	yfdH	-	GT2	M	ko:K12999	-	ko00000,ko01000,ko01003,ko01005	Glycosyltransferase, group 2 family protein
DOOMIPKP_01317	1.06e-86	-	-	-	S	-	-	-	GtrA-like protein
DOOMIPKP_01318	4.76e-42	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
DOOMIPKP_01319	5.15e-154	rsuA	5.4.99.19	-	J	ko:K06183	-	ko00000,ko01000,ko03009	Belongs to the pseudouridine synthase RsuA family
DOOMIPKP_01320	4.22e-232	-	3.6.4.12	-	K	ko:K03655	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Putative ATP-dependent DNA helicase recG C-terminal
DOOMIPKP_01321	3.48e-288	thiI	2.8.1.4	-	H	ko:K03151	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko03016	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
DOOMIPKP_01322	9.02e-275	iscS2	2.8.1.7	-	E	ko:K04487	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko02048,ko03016,ko03029	Aminotransferase class V
DOOMIPKP_01323	0.0	ezrA	-	-	D	ko:K06286	-	ko00000,ko03036	modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
DOOMIPKP_01324	3.07e-142	rpsD	-	-	J	ko:K02986	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
DOOMIPKP_01325	5.68e-110	-	-	-	S	-	-	-	Protein of unknown function (DUF1694)
DOOMIPKP_01326	4.21e-302	rarA	-	-	L	ko:K07478	-	ko00000	recombination factor protein RarA
DOOMIPKP_01327	1.35e-56	-	-	-	-	-	-	-	-
DOOMIPKP_01328	1.83e-101	uspA	-	-	T	-	-	-	universal stress protein
DOOMIPKP_01329	0.0	pulA	3.2.1.41	CBM48,GH13	G	ko:K01200	ko00500,ko01100,ko01110,map00500,map01100,map01110	ko00000,ko00001,ko01000	belongs to the glycosyl hydrolase 13 family
DOOMIPKP_01330	1.52e-139	-	-	-	L	-	-	-	Transposase
DOOMIPKP_01331	2.91e-276	rodA	-	-	D	ko:K05837	-	ko00000,ko03036	Belongs to the SEDS family
DOOMIPKP_01332	1.26e-46	-	-	-	S	-	-	-	Protein of unknown function (DUF2969)
DOOMIPKP_01333	5.54e-69	ytjA	-	-	S	ko:K08998	-	ko00000	Could be involved in insertion of integral membrane proteins into the membrane
DOOMIPKP_01334	3.38e-227	mbl	-	-	D	ko:K03569	-	ko00000,ko02048,ko03036,ko04812	Cell shape determining protein MreB Mrl
DOOMIPKP_01335	1.52e-43	-	-	-	S	-	-	-	Protein of unknown function (DUF1146)
DOOMIPKP_01336	9.59e-91	atpC	-	-	C	ko:K02114	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Produces ATP from ADP in the presence of a proton gradient across the membrane
DOOMIPKP_01337	0.0	atpD	3.6.3.14	-	C	ko:K02112	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko01000	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
DOOMIPKP_01338	4.54e-216	atpG	-	-	C	ko:K02115	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
DOOMIPKP_01339	0.0	atpA	3.6.3.14	-	C	ko:K02111	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko01000	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
DOOMIPKP_01340	2.67e-119	atpH	-	-	C	ko:K02113	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
DOOMIPKP_01341	1.69e-86	atpF	-	-	C	ko:K02109	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
DOOMIPKP_01342	4.36e-39	atpE	-	-	C	ko:K02110	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
DOOMIPKP_01343	4.44e-161	atpB	-	-	C	ko:K02108	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko03110	it plays a direct role in the translocation of protons across the membrane
DOOMIPKP_01344	5.28e-146	upp	2.4.2.9	-	F	ko:K00761	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
DOOMIPKP_01345	1.36e-242	ywlC	2.7.7.87	-	J	ko:K07566	-	ko00000,ko01000,ko03009,ko03016	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
DOOMIPKP_01346	1.24e-198	prmC	2.1.1.297	-	J	ko:K02493	-	ko00000,ko01000,ko03012	Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
DOOMIPKP_01347	3.81e-236	prfA	-	-	J	ko:K02835	-	ko00000,ko03012	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
DOOMIPKP_01348	7.02e-146	tdk	2.7.1.21	-	F	ko:K00857	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	thymidine kinase
DOOMIPKP_01349	0.0	murE2	6.3.2.13	-	M	ko:K01928	ko00300,ko00550,map00300,map00550	ko00000,ko00001,ko01000,ko01011	Domain of unknown function (DUF1727)
DOOMIPKP_01352	1.13e-249	ampC	-	-	V	-	-	-	Beta-lactamase
DOOMIPKP_01353	1.39e-275	-	-	-	EGP	-	-	-	Major Facilitator
DOOMIPKP_01354	0.0	pgi	5.3.1.9	-	G	ko:K01810	ko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the GPI family
DOOMIPKP_01355	5.3e-137	vanZ	-	-	V	-	-	-	VanZ like family
DOOMIPKP_01356	0.0	ltaS	2.7.8.20	-	M	ko:K19005	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
DOOMIPKP_01357	0.0	yclK	-	-	T	-	-	-	Histidine kinase
DOOMIPKP_01358	6.88e-171	-	-	-	K	-	-	-	Transcriptional regulatory protein, C terminal
DOOMIPKP_01359	9.01e-90	-	-	-	S	-	-	-	SdpI/YhfL protein family
DOOMIPKP_01360	1.93e-242	manA	5.3.1.8	-	G	ko:K01809	ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	mannose-6-phosphate isomerase
DOOMIPKP_01361	4.53e-284	patB	4.4.1.8	-	E	ko:K14155	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko01000,ko01007	Aminotransferase, class I
DOOMIPKP_01362	2.71e-102	-	-	-	M	-	-	-	Protein of unknown function (DUF3737)
DOOMIPKP_01363	1.02e-20	-	-	-	M	-	-	-	Protein of unknown function (DUF3737)
DOOMIPKP_01365	4.34e-281	ackA	2.7.2.1	-	F	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
DOOMIPKP_01366	4.37e-241	ytxK	2.1.1.72	-	L	ko:K00571	-	ko00000,ko01000,ko02048	N-6 DNA Methylase
DOOMIPKP_01367	3.69e-30	-	-	-	-	-	-	-	-
DOOMIPKP_01368	1.12e-99	-	-	-	U	ko:K02248	-	ko00000,ko00002,ko02044	Putative Competence protein ComGF
DOOMIPKP_01369	1.68e-55	-	-	-	-	-	-	-	-
DOOMIPKP_01370	8.52e-93	-	-	-	-	ko:K02246	-	ko00000,ko00002,ko02044	-
DOOMIPKP_01371	7.88e-63	comGC	-	-	U	ko:K02245	-	ko00000,ko00002,ko02044	competence protein ComGC
DOOMIPKP_01372	5.15e-224	comGB	-	-	NU	ko:K02244	-	ko00000,ko00002,ko02044	type II secretion system
DOOMIPKP_01373	5.04e-231	comGA	-	-	NU	ko:K02243	-	ko00000,ko00002,ko02044	Type II IV secretion system protein
DOOMIPKP_01374	5.65e-171	yebC	-	-	K	-	-	-	Transcriptional regulatory protein
DOOMIPKP_01375	2.83e-121	-	-	-	S	-	-	-	VanZ like family
DOOMIPKP_01376	9.93e-143	ylbE	-	-	GM	-	-	-	NAD(P)H-binding
DOOMIPKP_01377	4.8e-38	rpsN	-	-	J	ko:K02954	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
DOOMIPKP_01379	0.0	-	-	-	E	-	-	-	Amino acid permease
DOOMIPKP_01380	1.9e-231	ybcH	-	-	D	ko:K06889	-	ko00000	Alpha beta
DOOMIPKP_01381	0.0	-	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
DOOMIPKP_01382	4.46e-119	pts33BCA	-	-	G	ko:K02755,ko:K02756,ko:K02757	ko02060,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
DOOMIPKP_01383	0.0	pts33BCA	-	-	G	ko:K02755,ko:K02756,ko:K02757	ko02060,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
DOOMIPKP_01384	5.06e-196	bglG5	-	-	K	ko:K03488	-	ko00000,ko03000	CAT RNA binding domain
DOOMIPKP_01385	1e-268	glxK	2.7.1.165	-	G	ko:K00865	ko00260,ko00561,ko00630,ko01100,ko01120,ko01130,map00260,map00561,map00630,map01100,map01120,map01130	ko00000,ko00001,ko01000	Belongs to the glycerate kinase type-1 family
DOOMIPKP_01386	3.07e-112	ptpA	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
DOOMIPKP_01387	2.44e-154	-	-	-	-	-	-	-	-
DOOMIPKP_01388	6.52e-98	copY	-	-	K	ko:K02171	ko01501,map01501	ko00000,ko00001,ko00002,ko01504,ko03000	Penicillinase repressor
DOOMIPKP_01389	8.04e-190	-	-	-	S	-	-	-	hydrolase
DOOMIPKP_01390	0.0	glmM	5.4.2.10	-	G	ko:K03431	ko00520,ko01100,ko01130,map00520,map01100,map01130	ko00000,ko00001,ko01000	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
DOOMIPKP_01391	2.76e-221	ybbR	-	-	S	-	-	-	YbbR-like protein
DOOMIPKP_01392	2.13e-194	dacA	2.7.7.85	-	S	ko:K18672	-	ko00000,ko01000	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
DOOMIPKP_01393	8.14e-265	potD	-	-	P	ko:K11069	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
DOOMIPKP_01394	2.6e-170	potC	-	-	P	ko:K11070	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
DOOMIPKP_01395	5.53e-176	potB	-	-	P	ko:K11071	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
DOOMIPKP_01396	1.25e-263	potA	3.6.3.30, 3.6.3.31	-	P	ko:K02010,ko:K11072	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
DOOMIPKP_01397	1.71e-209	murB	1.3.1.98	-	M	ko:K00075	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation
DOOMIPKP_01398	1.51e-127	dnaQ	2.7.7.7	-	L	ko:K02342	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III
DOOMIPKP_01399	5.86e-114	ydiB	-	-	O	ko:K06925	-	ko00000,ko03016	Hydrolase, P-loop family
DOOMIPKP_01400	2.22e-232	pta	2.3.1.8, 3.6.3.21	-	C	ko:K00625,ko:K02028	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000,ko02000	phosphate acetyltransferase
DOOMIPKP_01401	1.64e-174	ung	3.2.2.27	-	L	ko:K03648	ko03410,ko05340,map03410,map05340	ko00000,ko00001,ko01000,ko03400	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
DOOMIPKP_01402	8.41e-202	ycsE	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
DOOMIPKP_01403	3.07e-124	-	-	-	-	-	-	-	-
DOOMIPKP_01404	5.46e-183	tpiA	5.3.1.1	-	G	ko:K01803	ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
DOOMIPKP_01405	2.86e-286	pgk	2.7.2.3	-	F	ko:K00927	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the phosphoglycerate kinase family
DOOMIPKP_01406	2.86e-244	gap	1.2.1.12	-	G	ko:K00134	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
DOOMIPKP_01407	1.65e-241	cggR	-	-	K	ko:K05311	-	ko00000,ko03000	Putative sugar-binding domain
DOOMIPKP_01409	0.0	-	-	-	-	-	-	-	-
DOOMIPKP_01410	5.21e-154	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
DOOMIPKP_01411	0.0	ycaM	-	-	E	-	-	-	amino acid
DOOMIPKP_01412	5.21e-181	-	-	-	S	-	-	-	Cysteine-rich secretory protein family
DOOMIPKP_01413	1.32e-101	-	-	-	K	-	-	-	MerR HTH family regulatory protein
DOOMIPKP_01414	0.0	ycnB	-	-	U	-	-	-	Belongs to the major facilitator superfamily
DOOMIPKP_01415	6.78e-124	-	-	-	S	-	-	-	Domain of unknown function (DUF4811)
DOOMIPKP_01416	5.56e-167	ybbM	-	-	S	ko:K02069	-	ko00000,ko00002,ko02000	Uncharacterised protein family (UPF0014)
DOOMIPKP_01417	3.16e-144	ybbL	-	-	S	ko:K02068	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
DOOMIPKP_01418	0.0	-	-	-	S	-	-	-	SH3-like domain
DOOMIPKP_01419	1.16e-128	clpP	3.4.21.92	-	O	ko:K01358	ko04112,ko04212,map04112,map04212	ko00000,ko00001,ko01000,ko01002	Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
DOOMIPKP_01420	8.59e-221	whiA	-	-	K	ko:K09762	-	ko00000	May be required for sporulation
DOOMIPKP_01421	2.78e-251	yvcK	-	-	S	-	-	-	Required for morphogenesis under gluconeogenic growth conditions
DOOMIPKP_01422	2.44e-211	yvcJ	-	-	S	ko:K06958	-	ko00000,ko03019	Displays ATPase and GTPase activities
DOOMIPKP_01423	1.88e-118	-	-	-	S	-	-	-	Short repeat of unknown function (DUF308)
DOOMIPKP_01424	0.0	uvrA	-	-	L	ko:K03701	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
DOOMIPKP_01425	0.0	uvrB	-	-	L	ko:K03702	ko03420,map03420	ko00000,ko00001,ko03400	damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
DOOMIPKP_01426	0.0	pgm	5.4.2.2	-	G	ko:K01835	ko00010,ko00030,ko00052,ko00230,ko00500,ko00520,ko00521,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00052,map00230,map00500,map00520,map00521,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
DOOMIPKP_01427	3.42e-232	trxB	1.8.1.9	-	C	ko:K00384	ko00450,map00450	ko00000,ko00001,ko01000	Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
DOOMIPKP_01428	5.73e-240	gpsA	1.1.1.94	-	I	ko:K00057	ko00564,ko01110,map00564,map01110	ko00000,ko00001,ko01000	Glycerol-3-phosphate dehydrogenase
DOOMIPKP_01429	2.43e-204	lgt	-	-	M	ko:K13292	-	ko00000,ko01000	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
DOOMIPKP_01430	3.54e-230	hprK	-	-	F	ko:K06023	-	ko00000,ko01000	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
DOOMIPKP_01431	1.02e-27	-	-	-	-	-	-	-	-
DOOMIPKP_01432	3.19e-238	prfB	-	-	J	ko:K02836	-	ko00000,ko03012	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
DOOMIPKP_01433	0.0	secA	-	-	U	ko:K03070	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
DOOMIPKP_01434	2.68e-123	hpf	-	-	J	ko:K05808	-	ko00000,ko03009	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
DOOMIPKP_01435	2.94e-172	comFC	-	-	S	ko:K02242	-	ko00000,ko00002,ko02044	Competence protein
DOOMIPKP_01436	2.68e-314	comFA	-	-	L	ko:K02240	-	ko00000,ko00002,ko02044	Helicase C-terminal domain protein
DOOMIPKP_01437	5.04e-154	yvyE	3.4.13.9	-	S	ko:K01271	-	ko00000,ko01000,ko01002	YigZ family
DOOMIPKP_01438	2.76e-268	tagO	2.7.8.33, 2.7.8.35	-	M	ko:K02851	-	ko00000,ko01000,ko01003,ko01005	transferase
DOOMIPKP_01439	4.75e-290	rny	-	-	S	ko:K18682	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	Endoribonuclease that initiates mRNA decay
DOOMIPKP_01440	2.02e-249	recA	-	-	L	ko:K03553	ko03440,map03440	ko00000,ko00001,ko00002,ko03400	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
DOOMIPKP_01441	3.92e-123	pgsA	2.7.8.5	-	I	ko:K00995	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
DOOMIPKP_01442	9.35e-154	ymfM	-	-	S	ko:K15539	-	ko00000	Helix-turn-helix domain
DOOMIPKP_01443	6.87e-172	fabG	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Enoyl-(Acyl carrier protein) reductase
DOOMIPKP_01444	9.49e-302	ymfH	-	-	S	-	-	-	Peptidase M16
DOOMIPKP_01445	4.2e-284	ymfF	-	-	S	-	-	-	Peptidase M16 inactive domain protein
DOOMIPKP_01446	0.0	ftsK	-	-	D	ko:K03466	-	ko00000,ko03036	Belongs to the FtsK SpoIIIE SftA family
DOOMIPKP_01447	1.74e-88	-	-	-	S	-	-	-	Protein of unknown function (DUF1149)
DOOMIPKP_01448	2.12e-136	cspR	2.1.1.207	-	J	ko:K03216	-	ko00000,ko01000,ko03016	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
DOOMIPKP_01449	2.19e-270	XK27_05220	-	-	S	-	-	-	AI-2E family transporter
DOOMIPKP_01450	1.99e-87	srlB	2.7.1.198	-	G	ko:K02781	ko00051,ko02060,map00051,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system glucitol/sorbitol-specific IIA component
DOOMIPKP_01451	2.49e-256	pgl	3.1.1.31	-	G	ko:K07404	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Lactonase, 7-bladed beta-propeller
DOOMIPKP_01452	5.36e-122	-	-	-	S	-	-	-	SNARE associated Golgi protein
DOOMIPKP_01453	0.0	mycA	4.2.1.53	-	S	ko:K10254	-	ko00000,ko01000	Myosin-crossreactive antigen
DOOMIPKP_01454	1.54e-218	rluD2	5.4.99.23	-	J	ko:K06180	-	ko00000,ko01000,ko03009	Responsible for synthesis of pseudouridine from uracil
DOOMIPKP_01455	1.91e-195	nadK	2.7.1.23	-	F	ko:K00858	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
DOOMIPKP_01456	1.7e-147	yjbM	2.7.6.5	-	S	ko:K07816	ko00230,map00230	ko00000,ko00001,ko01000	RelA SpoT domain protein
DOOMIPKP_01457	1.03e-144	-	-	-	S	-	-	-	CYTH
DOOMIPKP_01458	2.34e-147	yjbH	-	-	Q	-	-	-	Thioredoxin
DOOMIPKP_01459	1.36e-207	coiA	-	-	S	ko:K06198	-	ko00000	Competence protein
DOOMIPKP_01460	1.5e-178	mecA	-	-	NOT	ko:K16511	-	ko00000	Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
DOOMIPKP_01461	6.28e-87	spxA	-	-	K	ko:K16509	-	ko00000	Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
DOOMIPKP_01462	0.0	ptsI	2.7.3.9	-	G	ko:K08483	ko02060,map02060	ko00000,ko00001,ko01000,ko02000	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
DOOMIPKP_01463	1.29e-54	ptsH	-	-	G	ko:K11189	-	ko00000,ko02000	phosphocarrier protein HPR
DOOMIPKP_01464	2.6e-37	-	-	-	-	-	-	-	-
DOOMIPKP_01465	0.0	clpE	-	-	O	ko:K03697	-	ko00000,ko03110	Belongs to the ClpA ClpB family
DOOMIPKP_01466	5.93e-60	XK27_09445	-	-	S	-	-	-	Domain of unknown function (DUF1827)
DOOMIPKP_01467	4.78e-42	-	-	-	-	-	-	-	-
DOOMIPKP_01468	2.04e-68	-	-	-	L	-	-	-	Transposase
DOOMIPKP_01470	2.26e-244	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
DOOMIPKP_01472	0.0	-	-	-	V	-	-	-	ABC transporter transmembrane region
DOOMIPKP_01473	1.97e-189	-	-	-	-	-	-	-	-
DOOMIPKP_01474	0.0	prfC	-	-	J	ko:K02837	-	ko00000,ko03012	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
DOOMIPKP_01475	1.24e-181	hlyX	-	-	S	ko:K03699	-	ko00000,ko02042	Transporter associated domain
DOOMIPKP_01476	3.85e-98	-	-	-	-	-	-	-	-
DOOMIPKP_01477	1.74e-111	-	-	-	-	-	-	-	-
DOOMIPKP_01478	2.79e-185	recX	-	-	S	ko:K03565	-	ko00000,ko03400	Regulatory protein RecX
DOOMIPKP_01479	0.0	rumA_1	2.1.1.190, 2.1.1.35	-	J	ko:K00557,ko:K03215	-	ko00000,ko01000,ko03009,ko03016	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
DOOMIPKP_01480	1.35e-178	ybcH	-	-	D	ko:K06889	-	ko00000	Alpha beta
DOOMIPKP_01481	8.09e-37	ybcH	-	-	D	ko:K06889	-	ko00000	Alpha beta
DOOMIPKP_01482	7.74e-61	-	-	-	-	-	-	-	-
DOOMIPKP_01483	3.04e-278	mvaS	2.3.3.10	-	I	ko:K01641	ko00072,ko00280,ko00650,ko00900,ko01100,ko01110,ko01130,map00072,map00280,map00650,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Hydroxymethylglutaryl-CoA synthase
DOOMIPKP_01484	8.97e-274	mvaA	1.1.1.88, 2.3.1.9	-	C	ko:K00054,ko:K00626	ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the HMG-CoA reductase family
DOOMIPKP_01485	4.27e-273	atoB	1.1.1.88, 2.3.1.9	-	I	ko:K00054,ko:K00626	ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the thiolase family
DOOMIPKP_01486	4.58e-215	galU	2.7.7.9	-	M	ko:K00963	ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	UTP-glucose-1-phosphate uridylyltransferase
DOOMIPKP_01487	1.4e-208	rbn	-	-	S	ko:K07058	-	ko00000	Belongs to the UPF0761 family
DOOMIPKP_01488	2.45e-211	map	3.4.11.18	-	E	ko:K01265	-	ko00000,ko01000,ko01002	Methionine Aminopeptidase
DOOMIPKP_01489	5.14e-105	ykuP	-	-	C	ko:K03839	-	ko00000	Flavodoxin
DOOMIPKP_01490	3.7e-113	gtcA1	-	-	S	-	-	-	Teichoic acid glycosylation protein
DOOMIPKP_01491	6.59e-296	-	-	-	L	-	-	-	Transposase DDE domain
DOOMIPKP_01492	1.62e-278	mnaA	5.1.3.14	-	G	ko:K01791	ko00520,ko01100,ko05111,map00520,map01100,map05111	ko00000,ko00001,ko00002,ko01000,ko01005	Belongs to the UDP-N-acetylglucosamine 2-epimerase family
DOOMIPKP_01494	9.4e-317	chbC	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
DOOMIPKP_01495	6.95e-282	yfmL	-	-	L	-	-	-	DEAD DEAH box helicase
DOOMIPKP_01496	7.44e-168	lys	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
DOOMIPKP_01497	2.22e-296	-	-	-	E	ko:K03294	-	ko00000	amino acid
DOOMIPKP_01498	0.0	-	1.3.5.4	-	C	ko:K00244	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	ko00000,ko00001,ko00002,ko01000	FAD binding domain
DOOMIPKP_01499	4.8e-66	-	-	-	L	-	-	-	PFAM transposase, IS4 family protein
DOOMIPKP_01500	0.0	-	1.3.5.4	-	C	ko:K00244	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	ko00000,ko00001,ko00002,ko01000	FAD binding domain
DOOMIPKP_01501	8.59e-133	hpt	2.4.2.8	-	F	ko:K00760	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the purine pyrimidine phosphoribosyltransferase family
DOOMIPKP_01502	0.0	yhdP	-	-	S	-	-	-	Transporter associated domain
DOOMIPKP_01503	3.04e-154	-	-	-	C	-	-	-	nitroreductase
DOOMIPKP_01504	1.76e-52	-	-	-	-	-	-	-	-
DOOMIPKP_01505	1.96e-113	ptbA	2.7.1.208	-	G	ko:K02755,ko:K02777,ko:K20107,ko:K20108	ko00010,ko00500,ko00520,ko02026,ko02060,ko05111,map00010,map00500,map00520,map02026,map02060,map05111	ko00000,ko00001,ko00002,ko01000,ko02000	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
DOOMIPKP_01506	1.52e-103	-	-	-	-	-	-	-	-
DOOMIPKP_01507	1.62e-188	glvR	-	-	K	ko:K03481	-	ko00000,ko03000	Helix-turn-helix domain, rpiR family
DOOMIPKP_01508	0.0	glvC	2.7.1.208	-	G	ko:K02749,ko:K02750	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system, EIIB
DOOMIPKP_01509	3.84e-191	-	-	-	S	-	-	-	hydrolase
DOOMIPKP_01510	8.69e-195	-	-	-	S	-	-	-	Phospholipase, patatin family
DOOMIPKP_01511	0.0	xfp	4.1.2.22, 4.1.2.9	-	G	ko:K01621	ko00030,ko00710,ko01100,ko01120,map00030,map00710,map01100,map01120	ko00000,ko00001,ko01000	Phosphoketolase
DOOMIPKP_01512	2.79e-177	-	-	-	K	ko:K22103	-	ko00000,ko03000	DeoR C terminal sensor domain
DOOMIPKP_01513	7.12e-80	-	-	-	S	-	-	-	Enterocin A Immunity
DOOMIPKP_01514	1.29e-197	-	3.1.3.102, 3.1.3.104	-	S	ko:K20861	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	hydrolase
DOOMIPKP_01515	6.63e-174	gntR	-	-	K	-	-	-	UbiC transcription regulator-associated domain protein
DOOMIPKP_01516	1.01e-222	rihC	3.2.2.1	-	F	ko:K01239,ko:K01250,ko:K12700	ko00230,ko00760,ko01100,map00230,map00760,map01100	ko00000,ko00001,ko01000	Nucleoside
DOOMIPKP_01517	0.0	kup	-	-	P	ko:K03549	-	ko00000,ko02000	Transport of potassium into the cell
DOOMIPKP_01518	1.56e-162	rpiA	5.3.1.6	-	G	ko:K01807	ko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
DOOMIPKP_01519	2.09e-215	rbsK	2.7.1.15	-	H	ko:K00852	ko00030,map00030	ko00000,ko00001,ko01000	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
DOOMIPKP_01520	7.29e-209	-	-	-	C	-	-	-	Domain of unknown function (DUF4931)
DOOMIPKP_01521	2.2e-308	srrA1	-	-	G	ko:K02027,ko:K17244	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding protein
DOOMIPKP_01522	5.39e-208	-	-	-	L	-	-	-	Transposase DDE domain
DOOMIPKP_01523	5.66e-68	-	-	-	L	-	-	-	Transposase DDE domain
DOOMIPKP_01524	1.18e-216	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2325)
DOOMIPKP_01525	9.95e-285	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
DOOMIPKP_01526	2.09e-37	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2325)
DOOMIPKP_01527	2.45e-109	-	-	-	-	-	-	-	-
DOOMIPKP_01528	2.44e-210	-	-	-	S	-	-	-	Protein of unknown function (DUF2974)
DOOMIPKP_01529	3.65e-141	glnP	-	-	P	ko:K10040	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
DOOMIPKP_01530	7.42e-123	glnM	-	-	P	ko:K10040	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
DOOMIPKP_01531	3.16e-192	glnH	-	-	ET	ko:K10039	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
DOOMIPKP_01532	1.19e-174	glnQ	-	-	E	ko:K10041	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
DOOMIPKP_01533	4.52e-147	udk	2.7.1.48	-	F	ko:K00876	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	Zeta toxin
DOOMIPKP_01534	0.0	-	-	-	G	-	-	-	MFS/sugar transport protein
DOOMIPKP_01535	2.97e-130	ykoE	-	-	S	ko:K16925	-	ko00000,ko00002,ko02000	ABC-type cobalt transport system, permease component
DOOMIPKP_01536	0.0	XK27_09605	-	-	V	ko:K18892	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter transmembrane region
DOOMIPKP_01537	0.0	XK27_09600	-	-	V	ko:K06147,ko:K18891	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter, ATP-binding protein
DOOMIPKP_01538	4.11e-78	-	-	-	K	-	-	-	Transcriptional regulator, MarR family
DOOMIPKP_01539	2.11e-165	peb1A	-	-	ET	ko:K10039	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
DOOMIPKP_01540	3.34e-27	-	-	-	N	ko:K09384	-	ko00000	Uncharacterized conserved protein (DUF2075)
DOOMIPKP_01541	9.75e-286	ybgF	-	-	E	ko:K02205,ko:K03293,ko:K16235,ko:K16236	-	ko00000,ko02000	amino acid
DOOMIPKP_01542	2.16e-140	mmuM	2.1.1.10	-	H	ko:K00547	ko00270,ko01100,ko01110,map00270,map01100,map01110	ko00000,ko00001,ko01000	homocysteine S-methyltransferase
DOOMIPKP_01543	8.91e-07	amd	-	-	E	-	-	-	Peptidase family M20/M25/M40
DOOMIPKP_01544	0.0	-	-	-	S	-	-	-	PglZ domain
DOOMIPKP_01545	2.05e-43	-	-	-	S	-	-	-	Protein of unknown function (DUF2971)
DOOMIPKP_01546	0.0	-	-	-	LV	-	-	-	Eco57I restriction-modification methylase
DOOMIPKP_01547	8.33e-258	-	-	-	K	-	-	-	RNA-binding protein homologous to eukaryotic snRNP
DOOMIPKP_01548	1.71e-137	-	-	-	S	-	-	-	Domain of unknown function (DUF1788)
DOOMIPKP_01549	3.98e-128	-	-	-	S	-	-	-	Putative inner membrane protein (DUF1819)
DOOMIPKP_01550	4.23e-41	-	-	-	K	-	-	-	Helix-turn-helix domain
DOOMIPKP_01551	3.29e-38	-	-	-	S	-	-	-	Phage derived protein Gp49-like (DUF891)
DOOMIPKP_01553	1.81e-148	-	-	-	F	-	-	-	glutamine amidotransferase
DOOMIPKP_01554	9.95e-102	steT	-	-	E	ko:K03294	-	ko00000	amino acid
DOOMIPKP_01555	6.85e-126	steT	-	-	E	ko:K03294	-	ko00000	amino acid
DOOMIPKP_01556	5.3e-174	-	-	-	-	-	-	-	-
DOOMIPKP_01557	6.07e-223	ydhF	-	-	S	-	-	-	Aldo keto reductase
DOOMIPKP_01558	0.0	ykpA	-	-	S	-	-	-	ABC transporter, ATP-binding protein
DOOMIPKP_01559	4.37e-266	pepA	-	-	E	-	-	-	M42 glutamyl aminopeptidase
DOOMIPKP_01560	5.74e-129	-	-	-	-	-	-	-	-
DOOMIPKP_01561	4.44e-171	-	-	-	-	-	-	-	-
DOOMIPKP_01562	1.09e-272	pmrA	-	-	EGP	ko:K08161	-	ko00000,ko02000	MFS_1 like family
DOOMIPKP_01563	0.0	qacA	-	-	EGP	-	-	-	Major Facilitator
DOOMIPKP_01564	7.16e-116	pyrR	2.4.2.9	-	F	ko:K02825	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000,ko03000	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
DOOMIPKP_01565	1.66e-303	pyrP	-	-	F	ko:K02824	-	ko00000,ko02000	Permease
DOOMIPKP_01566	0.0	-	3.6.4.12	-	K	ko:K03655	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Putative DNA-binding domain
DOOMIPKP_01567	8.97e-47	-	-	-	-	-	-	-	-
DOOMIPKP_01568	1.2e-199	-	1.1.1.346	-	S	ko:K06221	-	ko00000,ko01000	reductase
DOOMIPKP_01569	1.93e-59	-	-	-	-	-	-	-	-
DOOMIPKP_01570	2e-257	-	-	-	V	ko:K06147,ko:K06148	-	ko00000,ko02000	ABC transporter transmembrane region
DOOMIPKP_01571	1.07e-121	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
DOOMIPKP_01572	6.13e-110	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
DOOMIPKP_01573	0.0	-	4.2.1.53	-	S	ko:K10254	-	ko00000,ko01000	Myosin-crossreactive antigen
DOOMIPKP_01574	6.21e-119	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
DOOMIPKP_01575	0.0	qacA	-	-	EGP	-	-	-	Major Facilitator
DOOMIPKP_01580	1.42e-122	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
DOOMIPKP_01581	0.0	rumA_2	2.1.1.190	-	J	ko:K03215	-	ko00000,ko01000,ko03009	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
DOOMIPKP_01582	2.39e-255	flp	-	-	V	-	-	-	Beta-lactamase
DOOMIPKP_01583	2.79e-309	nhaC	-	-	C	ko:K03315	-	ko00000,ko02000	Na H antiporter NhaC
DOOMIPKP_01584	4.03e-186	-	-	-	I	-	-	-	transferase activity, transferring acyl groups other than amino-acyl groups
DOOMIPKP_01585	1.46e-75	-	-	-	-	-	-	-	-
DOOMIPKP_01586	2.61e-148	ybhL	-	-	S	ko:K06890	-	ko00000	Belongs to the BI1 family
DOOMIPKP_01587	9.65e-220	dagK	2.7.1.107	-	G	ko:K07029	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko01000	Lipid kinase
DOOMIPKP_01588	0.0	gatB	6.3.5.6, 6.3.5.7	-	J	ko:K02434	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
DOOMIPKP_01589	0.0	gatA	6.3.5.6, 6.3.5.7	-	J	ko:K02433	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
DOOMIPKP_01590	5.42e-67	gatC	6.3.5.6, 6.3.5.7	-	J	ko:K02435	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
DOOMIPKP_01591	1.04e-266	camS	-	-	S	-	-	-	sex pheromone
DOOMIPKP_01592	0.0	ligA	6.5.1.2	-	L	ko:K01972	ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430	ko00000,ko00001,ko01000,ko03032,ko03400	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
DOOMIPKP_01593	0.0	pcrA	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	ATP-dependent DNA helicase
DOOMIPKP_01594	6.64e-127	acmA	3.2.1.17, 3.2.1.96	-	NU	ko:K01185,ko:K01227	ko00511,map00511	ko00000,ko00001,ko01000	mannosyl-glycoprotein
DOOMIPKP_01596	1.11e-110	ydcK	-	-	S	ko:K03095	-	ko00000	Belongs to the SprT family
DOOMIPKP_01597	2.33e-174	-	-	-	M	-	-	-	Glycosyltransferase sugar-binding region containing DXD motif
DOOMIPKP_01598	0.0	epsU	-	-	S	ko:K03328	-	ko00000	Polysaccharide biosynthesis protein
DOOMIPKP_01599	2.63e-286	-	-	-	M	-	-	-	CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
DOOMIPKP_01600	0.0	pacL	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	P-type ATPase
DOOMIPKP_01601	6.65e-196	nadE	6.3.1.5	-	F	ko:K01916	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
DOOMIPKP_01602	0.0	pncB	6.3.4.21	-	F	ko:K00763	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
DOOMIPKP_01603	1.77e-262	-	-	-	M	-	-	-	Glycosyl transferases group 1
DOOMIPKP_01604	5.23e-172	tagA	2.4.1.187	GT26	F	ko:K05946	ko05111,map05111	ko00000,ko00001,ko01000,ko01003	Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
DOOMIPKP_01605	2.13e-92	tagD	2.7.7.39	-	IM	ko:K00980	ko00564,map00564	ko00000,ko00001,ko01000	Glycerol-3-phosphate cytidylyltransferase
DOOMIPKP_01606	1.87e-159	gntR1	-	-	K	ko:K03710	-	ko00000,ko03000	UTRA
DOOMIPKP_01607	5.33e-233	-	-	-	-	-	-	-	-
DOOMIPKP_01608	0.0	oppA2	-	-	E	ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
DOOMIPKP_01611	2.18e-305	npr	1.11.1.1	-	C	ko:K05910	-	ko00000,ko01000	NADH oxidase
DOOMIPKP_01612	4.19e-90	slpX	-	-	S	-	-	-	SLAP domain
DOOMIPKP_01613	3e-186	-	-	-	K	-	-	-	SIS domain
DOOMIPKP_01614	9e-156	rpiA1	5.3.1.6	-	G	ko:K01807	ko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
DOOMIPKP_01615	2.42e-236	XK27_10475	-	-	S	-	-	-	Oxidoreductase family, NAD-binding Rossmann fold
DOOMIPKP_01616	7.47e-280	araT	2.6.1.57	-	E	ko:K00832,ko:K00841	ko00270,ko00300,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01230,map00270,map00300,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase
DOOMIPKP_01618	9.97e-144	glpQ1	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	glycerophosphoryl diester phosphodiesterase
DOOMIPKP_01619	4.13e-148	-	-	-	G	-	-	-	Antibiotic biosynthesis monooxygenase
DOOMIPKP_01620	4.99e-112	-	-	-	G	-	-	-	Histidine phosphatase superfamily (branch 1)
DOOMIPKP_01621	8.92e-136	-	-	-	G	-	-	-	Phosphoglycerate mutase family
DOOMIPKP_01622	8.45e-213	-	-	-	D	-	-	-	nuclear chromosome segregation
DOOMIPKP_01623	1.39e-132	-	-	-	M	-	-	-	LysM domain protein
DOOMIPKP_01624	2.63e-35	licC	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
DOOMIPKP_01625	3.86e-150	licC	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
DOOMIPKP_01626	0.0	-	-	-	L	ko:K07496	-	ko00000	Putative transposase DNA-binding domain
DOOMIPKP_01627	5.52e-152	-	-	-	L	-	-	-	Resolvase, N-terminal
DOOMIPKP_01628	1.25e-17	-	-	-	-	-	-	-	-
DOOMIPKP_01629	4.79e-221	pphA	3.1.3.16	-	T	ko:K07313	-	ko00000,ko01000	Calcineurin-like phosphoesterase
DOOMIPKP_01630	1.04e-41	-	-	-	-	-	-	-	-
DOOMIPKP_01632	1.09e-91	-	-	-	S	-	-	-	Iron-sulphur cluster biosynthesis
DOOMIPKP_01633	1.31e-146	-	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	Maltose acetyltransferase
DOOMIPKP_01634	2.84e-80	psiE	-	-	S	ko:K13256	-	ko00000	Phosphate-starvation-inducible E
DOOMIPKP_01636	2.22e-182	nfrA	1.5.1.38	-	C	ko:K19285	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	nitroreductase
DOOMIPKP_01637	1.59e-78	-	-	-	-	-	-	-	-
DOOMIPKP_01638	0.0	-	-	-	L	ko:K03724	-	ko00000,ko01000,ko03400	DEAD DEAH box helicase
DOOMIPKP_01639	0.0	-	-	-	P	-	-	-	P-loop Domain of unknown function (DUF2791)
DOOMIPKP_01640	0.0	-	-	-	S	-	-	-	TerB-C domain
DOOMIPKP_01641	0.0	pckA	4.1.1.49	-	H	ko:K01610	ko00010,ko00020,ko00620,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00710,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Phosphoenolpyruvate carboxykinase
DOOMIPKP_01642	0.0	-	-	-	V	ko:K06147,ko:K06148	-	ko00000,ko02000	ABC transporter transmembrane region
DOOMIPKP_01644	2.5e-124	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
DOOMIPKP_01645	2.45e-123	-	-	-	L	-	-	-	COG2826 Transposase and inactivated derivatives, IS30 family
DOOMIPKP_01646	2.7e-67	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
DOOMIPKP_01647	4.02e-90	apfA	3.6.1.61	-	F	ko:K18445	ko00230,map00230	ko00000,ko00001,ko01000	Nudix hydrolase
DOOMIPKP_01648	1.66e-42	-	-	-	-	-	-	-	-
DOOMIPKP_01649	3.87e-86	ackA	2.7.2.1	-	F	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
DOOMIPKP_01650	1.24e-109	ackA	2.7.2.1	-	F	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
DOOMIPKP_01651	6.29e-12	ackA	2.7.2.1	-	F	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	acetate kinase activity
DOOMIPKP_01652	0.0	glmS	2.6.1.16	-	M	ko:K00820	ko00250,ko00520,ko01100,ko01130,ko04931,map00250,map00520,map01100,map01130,map04931	ko00000,ko00001,ko01000,ko01002	Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
DOOMIPKP_01653	0.0	adhE	1.1.1.1, 1.2.1.10	-	C	ko:K04072	ko00010,ko00071,ko00350,ko00620,ko00625,ko00626,ko00650,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00620,map00625,map00626,map00650,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	belongs to the iron- containing alcohol dehydrogenase family
DOOMIPKP_01654	1.02e-311	cycA	-	-	E	ko:K03293,ko:K11737	-	ko00000,ko02000	Amino acid permease
DOOMIPKP_01655	6.62e-117	-	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	transferase hexapeptide repeat
DOOMIPKP_01656	3.06e-205	-	-	-	K	-	-	-	Transcriptional regulator
DOOMIPKP_01657	2.76e-83	-	-	-	S	-	-	-	Domain of unknown function (DUF956)
DOOMIPKP_01658	3.51e-222	manN	-	-	G	ko:K02796	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	system, mannose fructose sorbose family IID component
DOOMIPKP_01659	9.65e-181	manY	-	-	G	ko:K02746,ko:K02795	ko00051,ko00052,ko00520,ko01100,ko02060,map00051,map00052,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	PTS system
DOOMIPKP_01660	2.72e-236	manL	2.7.1.191	-	G	ko:K02793,ko:K02794	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system sorbose subfamily IIB component
DOOMIPKP_01662	2.3e-199	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
DOOMIPKP_01663	2.11e-89	-	-	-	L	-	-	-	Transposase DDE domain
DOOMIPKP_01664	0.0	-	-	-	L	-	-	-	Transposase DDE domain
DOOMIPKP_01665	1.22e-171	-	-	-	K	-	-	-	TipAS antibiotic-recognition domain
DOOMIPKP_01666	3.3e-88	-	-	-	L	-	-	-	Transposase DDE domain
DOOMIPKP_01667	3.91e-187	-	-	-	L	-	-	-	Transposase DDE domain
DOOMIPKP_01668	1.28e-77	-	-	-	L	-	-	-	Transposase DDE domain
DOOMIPKP_01669	1.67e-40	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
DOOMIPKP_01670	1.39e-47	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
DOOMIPKP_01671	3.65e-37	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
DOOMIPKP_01672	0.0	serS	6.1.1.11	-	J	ko:K01875	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
DOOMIPKP_01673	1.01e-128	yjcK	2.3.1.128	-	J	ko:K03790	-	ko00000,ko01000,ko03009	Acetyltransferase (GNAT) domain
DOOMIPKP_01674	3.2e-143	-	-	-	S	-	-	-	SNARE associated Golgi protein
DOOMIPKP_01675	3.19e-197	-	-	-	I	-	-	-	alpha/beta hydrolase fold
DOOMIPKP_01676	8.45e-204	plcR	-	-	K	ko:K20480	ko02024,map02024	ko00000,ko00001,ko03000	Helix-turn-helix
DOOMIPKP_01677	1.66e-117	-	-	-	F	-	-	-	Nucleoside 2-deoxyribosyltransferase
DOOMIPKP_01678	0.0	gabD	1.2.1.16, 1.2.1.20, 1.2.1.79	-	C	ko:K00135	ko00250,ko00310,ko00350,ko00650,ko00760,ko01100,ko01120,map00250,map00310,map00350,map00650,map00760,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Belongs to the aldehyde dehydrogenase family
DOOMIPKP_01679	1.2e-220	-	-	-	-	-	-	-	-
DOOMIPKP_01680	0.0	ydgH	-	-	S	ko:K06994	-	ko00000	MMPL family
DOOMIPKP_01681	3.76e-128	yobS	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
DOOMIPKP_01682	2.3e-206	-	3.5.2.6	-	V	ko:K17836	ko00311,ko01130,ko01501,map00311,map01130,map01501	ko00000,ko00001,ko00002,ko01000,ko01504	Beta-lactamase enzyme family
DOOMIPKP_01683	1.4e-207	corA	-	-	P	ko:K03284	-	ko00000,ko02000	CorA-like Mg2+ transporter protein
DOOMIPKP_01684	2.47e-309	-	-	-	G	ko:K02027	-	ko00000,ko00002,ko02000	Bacterial extracellular solute-binding protein
DOOMIPKP_01685	0.0	-	-	-	S	-	-	-	Zn-dependent metallo-hydrolase RNA specificity domain
DOOMIPKP_01686	5.62e-187	-	-	-	P	ko:K02026	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
DOOMIPKP_01687	1.64e-202	-	-	-	P	ko:K02025	-	ko00000,ko00002,ko02000	ABC-type sugar transport systems, permease components
DOOMIPKP_01688	4.32e-258	malK	-	-	P	ko:K10112,ko:K17240	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ATPases associated with a variety of cellular activities
DOOMIPKP_01689	0.0	pepD1	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
DOOMIPKP_01690	7.24e-204	endA	-	-	F	ko:K15051	-	ko00000	DNA RNA non-specific endonuclease
DOOMIPKP_01691	2.7e-232	-	2.7.7.7	-	L	ko:K02342	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	EXOIII
DOOMIPKP_01692	5.96e-202	-	-	-	K	-	-	-	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
DOOMIPKP_01693	2.23e-150	yviA	-	-	S	-	-	-	Protein of unknown function (DUF421)
DOOMIPKP_01694	1.3e-94	-	-	-	S	-	-	-	Protein of unknown function (DUF3290)
DOOMIPKP_01695	2.82e-182	pnuC	-	-	H	ko:K03811	-	ko00000,ko02000	nicotinamide mononucleotide transporter
DOOMIPKP_01697	2.46e-170	-	-	-	S	-	-	-	PAS domain
DOOMIPKP_01698	0.0	-	-	-	V	-	-	-	ABC transporter transmembrane region
DOOMIPKP_01699	1.28e-228	pepR	3.4.11.5	-	E	ko:K01259	ko00330,map00330	ko00000,ko00001,ko01000,ko01002	Releases the N-terminal proline from various substrates
DOOMIPKP_01700	6.36e-171	-	-	-	T	-	-	-	Transcriptional regulatory protein, C terminal
DOOMIPKP_01701	2.62e-315	-	-	-	T	-	-	-	GHKL domain
DOOMIPKP_01702	8.21e-114	ykoJ	-	-	S	-	-	-	Peptidase propeptide and YPEB domain
DOOMIPKP_01703	7.16e-132	-	-	-	S	-	-	-	Peptidase propeptide and YPEB domain
DOOMIPKP_01704	4.7e-125	XK27_03150	2.3.1.57	-	K	ko:K22441	-	ko00000,ko01000	Acetyltransferase (GNAT) domain
DOOMIPKP_01705	2.43e-100	yybA	-	-	K	-	-	-	Transcriptional regulator
DOOMIPKP_01706	1.55e-305	-	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter transmembrane region
DOOMIPKP_01707	0.0	oppA	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
DOOMIPKP_01708	1.8e-81	-	-	-	S	ko:K08987	-	ko00000	Protein of unknown function (DUF1304)
DOOMIPKP_01709	3.58e-128	-	-	-	S	-	-	-	Peptidase propeptide and YPEB domain
DOOMIPKP_01710	5.16e-135	efp	-	-	J	ko:K02356	-	ko00000,ko03012	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
DOOMIPKP_01711	4.98e-221	coaA	2.7.1.33	-	F	ko:K00867	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Pantothenic acid kinase
DOOMIPKP_01712	1.13e-126	-	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase
DOOMIPKP_01713	1.36e-96	yjcF	-	-	S	-	-	-	Acetyltransferase (GNAT) domain
DOOMIPKP_01714	2.58e-186	aatB	-	-	ET	ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter substrate-binding protein
DOOMIPKP_01715	2.92e-137	glnQ	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	ABC transporter
DOOMIPKP_01716	2.68e-142	yecS_2	-	-	P	ko:K02029,ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter permease
DOOMIPKP_01717	0.0	helD	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	DNA helicase
DOOMIPKP_01718	1.47e-158	XK27_08875	-	-	O	-	-	-	PFAM peptidase M10A and M12B, matrixin and adamalysin
DOOMIPKP_01719	7.53e-163	gpm2	-	-	G	-	-	-	Phosphoglycerate mutase family
DOOMIPKP_01720	1.87e-308	-	-	-	S	-	-	-	response to antibiotic
DOOMIPKP_01721	5.45e-162	-	-	-	-	-	-	-	-
DOOMIPKP_01722	0.0	pacL3	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	P-type ATPase
DOOMIPKP_01723	2.56e-86	-	2.7.1.191	-	G	ko:K02793	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system fructose IIA component
DOOMIPKP_01724	7.25e-57	-	-	-	-	-	-	-	-
DOOMIPKP_01725	6.6e-14	-	-	-	-	-	-	-	-
DOOMIPKP_01726	1.35e-238	ansA	3.5.1.1	-	EJ	ko:K01424	ko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110	ko00000,ko00001,ko01000	L-asparaginase, type I
DOOMIPKP_01727	1.43e-176	-	-	-	K	ko:K03481	-	ko00000,ko03000	Helix-turn-helix domain, rpiR family
DOOMIPKP_01728	0.0	malH	3.2.1.122	GH4	G	ko:K01232	ko00500,map00500	ko00000,ko00001,ko01000	Family 4 glycosyl hydrolase C-terminal domain
DOOMIPKP_01729	5.06e-196	-	-	-	-	-	-	-	-
DOOMIPKP_01730	3.32e-13	-	-	-	-	-	-	-	-
DOOMIPKP_01731	1.44e-116	hpt	2.4.2.8	-	F	ko:K00760	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the purine pyrimidine phosphoribosyltransferase family
DOOMIPKP_01732	4.1e-135	-	-	-	K	ko:K06977	-	ko00000	acetyltransferase
DOOMIPKP_01734	1.7e-103	rfbD	1.1.1.133	-	M	ko:K00067	ko00521,ko00523,ko01130,map00521,map00523,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
DOOMIPKP_01735	5.19e-49	-	-	-	KQ	-	-	-	helix_turn_helix, mercury resistance
DOOMIPKP_01737	1.43e-182	-	5.2.1.8	-	M	ko:K07533	-	ko00000,ko01000,ko03110	Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
DOOMIPKP_01738	0.0	prtB	3.4.21.96	-	O	ko:K01361	-	ko00000,ko01000,ko01002,ko03110	Belongs to the peptidase S8 family
DOOMIPKP_01739	1.84e-33	rpe	5.1.3.1	-	G	ko:K01783	ko00030,ko00040,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the ribulose-phosphate 3-epimerase family
DOOMIPKP_01740	8.82e-26	rpe	5.1.3.1	-	G	ko:K01783	ko00030,ko00040,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the ribulose-phosphate 3-epimerase family
DOOMIPKP_01742	2.75e-56	-	-	-	-	-	-	-	-
DOOMIPKP_01743	4.64e-42	-	-	-	-	-	-	-	-
DOOMIPKP_01744	6.62e-12	-	-	-	M	-	-	-	Host cell surface-exposed lipoprotein
DOOMIPKP_01745	1.68e-155	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
DOOMIPKP_01746	1.86e-43	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
DOOMIPKP_01747	7.77e-145	-	-	-	J	-	-	-	Domain of unknown function (DUF4041)
DOOMIPKP_01751	4.43e-26	tnpA1	-	-	L	-	-	-	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
DOOMIPKP_01754	2.22e-12	-	-	-	-	-	-	-	-
DOOMIPKP_01755	6.64e-260	-	-	-	L	-	-	-	COG2826 Transposase and inactivated derivatives, IS30 family
DOOMIPKP_01756	5.23e-69	-	-	-	-	ko:K19157	-	ko00000,ko01000,ko02048	-
DOOMIPKP_01757	1.23e-57	-	-	-	S	ko:K07473	-	ko00000,ko02048	RelB antitoxin
DOOMIPKP_01758	5.19e-90	-	-	-	S	-	-	-	HicB_like antitoxin of bacterial toxin-antitoxin system
DOOMIPKP_01759	3.12e-21	-	-	-	N	-	-	-	HicA toxin of bacterial toxin-antitoxin,
DOOMIPKP_01760	0.0	sacB	2.4.1.10, 2.4.1.9	GH68	M	ko:K00692,ko:K20811	ko00500,ko01100,ko02020,map00500,map01100,map02020	ko00000,ko00001,ko01000,ko01003	Levansucrase/Invertase
DOOMIPKP_01761	3.16e-169	-	-	-	L	-	-	-	PFAM transposase IS116 IS110 IS902
DOOMIPKP_01762	8.77e-95	-	-	-	S	-	-	-	Bacteriophage abortive infection AbiH
DOOMIPKP_01764	6.09e-71	-	-	-	-	-	-	-	-
DOOMIPKP_01766	3.43e-131	-	-	-	S	-	-	-	KAP family P-loop domain
DOOMIPKP_01769	1.37e-83	galU	2.7.7.9	-	M	ko:K00963	ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	UTP-glucose-1-phosphate uridylyltransferase
DOOMIPKP_01770	1.25e-239	-	-	-	L	-	-	-	COG2826 Transposase and inactivated derivatives, IS30 family
DOOMIPKP_01771	9.52e-190	-	-	-	S	ko:K03328	-	ko00000	Membrane protein involved in the export of O-antigen and teichoic acid
DOOMIPKP_01772	4.81e-133	-	-	-	M	-	-	-	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
DOOMIPKP_01773	1.97e-71	-	-	-	E	-	-	-	D,D-heptose 1,7-bisphosphate phosphatase
DOOMIPKP_01774	6.73e-238	-	-	-	JM	-	-	-	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
DOOMIPKP_01776	1.89e-68	-	-	-	M	-	-	-	Glycosyltransferase sugar-binding region containing DXD motif
DOOMIPKP_01778	5.84e-97	-	-	-	M	-	-	-	Glycosyltransferase like family 2
DOOMIPKP_01779	4e-85	-	-	-	S	-	-	-	Hexapeptide repeat of succinyl-transferase
DOOMIPKP_01780	3.08e-111	-	-	-	M	-	-	-	Glycosyltransferase Family 4
DOOMIPKP_01781	1.14e-126	tagA	2.4.1.187	GT26	M	ko:K05946	ko05111,map05111	ko00000,ko00001,ko01000,ko01003	Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
DOOMIPKP_01782	7.39e-221	-	2.7.7.13	-	GM	ko:K00971	ko00051,ko00520,ko01100,ko01110,map00051,map00520,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Mannose-6-phosphate isomerase
DOOMIPKP_01783	2.19e-283	pgcA	5.4.2.2, 5.4.2.8	-	G	ko:K01835,ko:K01840	ko00010,ko00030,ko00051,ko00052,ko00230,ko00500,ko00520,ko00521,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00051,map00052,map00230,map00500,map00520,map00521,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
DOOMIPKP_01784	4.63e-146	epsE2	-	-	M	-	-	-	Bacterial sugar transferase
DOOMIPKP_01785	6.12e-182	ywqE	3.1.3.48	-	GM	ko:K01104	-	ko00000,ko01000	PHP domain protein
DOOMIPKP_01786	7.15e-163	ywqD	-	-	D	-	-	-	Capsular exopolysaccharide family
DOOMIPKP_01787	8.19e-189	epsB	-	-	M	-	-	-	biosynthesis protein
DOOMIPKP_01788	8.49e-243	brpA	-	-	K	-	-	-	Cell envelope-like function transcriptional attenuator common domain protein
DOOMIPKP_01789	9.52e-56	-	-	-	L	ko:K07473	-	ko00000,ko02048	RelB antitoxin
DOOMIPKP_01791	3.26e-292	hflX	-	-	S	ko:K03665	-	ko00000,ko03009	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
DOOMIPKP_01792	1.37e-227	-	-	-	S	-	-	-	Cysteine-rich secretory protein family
DOOMIPKP_01794	0.0	-	-	-	L	ko:K07496	-	ko00000	Putative transposase DNA-binding domain
DOOMIPKP_01795	1.59e-149	-	-	-	L	-	-	-	Resolvase, N-terminal
DOOMIPKP_01796	2.62e-20	-	-	-	-	-	-	-	-
DOOMIPKP_01797	1.49e-168	-	-	-	M	ko:K21471	-	ko00000,ko01000,ko01002,ko01011	NlpC/P60 family
DOOMIPKP_01798	1.28e-174	-	-	-	M	ko:K21471	-	ko00000,ko01000,ko01002,ko01011	NlpC P60 family protein
DOOMIPKP_01799	5.4e-124	-	-	-	M	ko:K21471	-	ko00000,ko01000,ko01002,ko01011	NlpC/P60 family
DOOMIPKP_01800	1.44e-122	gmk2	2.7.4.8	-	F	ko:K00942	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko00002,ko01000	Guanylate kinase homologues.
DOOMIPKP_01801	4.7e-58	-	-	-	-	-	-	-	-
DOOMIPKP_01802	0.0	-	-	-	S	-	-	-	O-antigen ligase like membrane protein
DOOMIPKP_01803	5.07e-143	-	-	-	-	-	-	-	-
DOOMIPKP_01804	2e-285	tnpB	-	-	L	ko:K07496	-	ko00000	Putative transposase DNA-binding domain
DOOMIPKP_01805	1.17e-101	nrdI	-	-	F	ko:K03647	-	ko00000	NrdI Flavodoxin like
DOOMIPKP_01806	3.8e-224	nrdF	1.17.4.1	-	F	ko:K00526	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
DOOMIPKP_01807	4.73e-101	-	-	-	-	-	-	-	-
DOOMIPKP_01808	2.15e-141	-	-	-	S	-	-	-	Peptidase_C39 like family
DOOMIPKP_01809	1.49e-108	-	-	-	S	-	-	-	Threonine/Serine exporter, ThrE
DOOMIPKP_01810	2.2e-175	-	-	-	S	-	-	-	Putative threonine/serine exporter
DOOMIPKP_01811	0.0	-	-	-	S	-	-	-	ABC transporter
DOOMIPKP_01812	5.97e-82	-	-	-	-	-	-	-	-
DOOMIPKP_01813	4.4e-132	rimL	-	-	J	ko:K03817	-	ko00000,ko01000,ko03009	Acetyltransferase (GNAT) domain
DOOMIPKP_01814	2.7e-127	-	-	-	-	-	-	-	-
DOOMIPKP_01815	1.89e-158	-	-	-	S	ko:K07150	-	ko00000	Protein of unknown function (DUF554)
DOOMIPKP_01816	1.45e-279	brpA	-	-	K	-	-	-	Cell envelope-like function transcriptional attenuator common domain protein
DOOMIPKP_01817	0.0	pepF	-	-	E	ko:K08602	-	ko00000,ko01000,ko01002	oligoendopeptidase F
DOOMIPKP_01818	8.52e-41	-	-	-	-	-	-	-	-
DOOMIPKP_01819	1.79e-92	doc	-	-	S	ko:K07341	-	ko00000,ko02048	Prophage maintenance system killer protein
DOOMIPKP_01820	2.38e-40	-	-	-	S	-	-	-	Enterocin A Immunity
DOOMIPKP_01821	4.94e-36	-	-	-	K	ko:K07729	-	ko00000,ko03000	Helix-turn-helix XRE-family like proteins
DOOMIPKP_01822	4.92e-12	-	-	-	-	-	-	-	-
DOOMIPKP_01823	1.01e-277	metE	2.1.1.14	-	E	ko:K00549	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	methionine synthase, vitamin-B12 independent
DOOMIPKP_01824	3.98e-116	luxS	4.4.1.21	-	H	ko:K07173	ko00270,ko01100,ko01230,ko02024,ko02026,ko05111,map00270,map01100,map01230,map02024,map02026,map05111	ko00000,ko00001,ko00002,ko01000	Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
DOOMIPKP_01825	0.0	lctP	-	-	C	ko:K03303	-	ko00000,ko02000	L-lactate permease
DOOMIPKP_01826	1.59e-172	znuB	-	-	U	ko:K02075,ko:K09816	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC 3 transport family
DOOMIPKP_01827	1.63e-152	adcC	-	-	P	ko:K02074,ko:K09817,ko:K11710	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter
DOOMIPKP_01828	9.59e-193	-	-	-	P	ko:K02077	-	ko00000,ko00002,ko02000	Belongs to the bacterial solute-binding protein 9 family
DOOMIPKP_01829	3.97e-59	-	-	-	K	ko:K21903	-	ko00000,ko03000	helix_turn_helix, Arsenical Resistance Operon Repressor
DOOMIPKP_01830	0.0	fruA	2.7.1.202	-	GT	ko:K02768,ko:K02769,ko:K02770	ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphotransferase System
DOOMIPKP_01831	2.18e-215	pfkB	2.7.1.56	-	H	ko:K00882	ko00051,map00051	ko00000,ko00001,ko01000	Belongs to the carbohydrate kinase PfkB family. LacC subfamily
DOOMIPKP_01832	3.14e-175	fruR	-	-	K	ko:K03436	-	ko00000,ko03000	DeoR C terminal sensor domain
DOOMIPKP_01833	2.13e-277	natB	-	-	CP	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 family transporter protein
DOOMIPKP_01834	5.12e-211	natA	-	-	S	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
DOOMIPKP_01835	2.18e-41	-	-	-	-	-	-	-	-
DOOMIPKP_01836	1.01e-12	-	-	-	-	-	-	-	-
DOOMIPKP_01837	1.19e-88	-	-	-	-	-	-	-	-
DOOMIPKP_01838	1.92e-34	-	-	-	-	-	-	-	-
DOOMIPKP_01839	6.32e-42	-	-	-	K	ko:K07727	-	ko00000,ko03000	Transcriptional regulator
DOOMIPKP_01840	1.73e-109	-	-	-	-	-	-	-	-
DOOMIPKP_01841	2.34e-31	-	-	-	-	-	-	-	-
DOOMIPKP_01842	6.88e-47	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
DOOMIPKP_01843	6.14e-187	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
DOOMIPKP_01846	9.5e-52	-	-	-	-	-	-	-	-
DOOMIPKP_01847	1.65e-83	-	-	-	-	-	-	-	-
DOOMIPKP_01848	5.59e-41	-	-	-	-	-	-	-	-
DOOMIPKP_01849	3.28e-185	-	-	-	K	ko:K07707	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko02022	LytTr DNA-binding domain
DOOMIPKP_01850	1.39e-259	-	2.7.13.3	-	T	ko:K07706	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	GHKL domain
DOOMIPKP_01852	1.02e-263	-	-	-	S	-	-	-	CAAX protease self-immunity
DOOMIPKP_01853	1.72e-13	-	-	-	-	-	-	-	-
DOOMIPKP_01854	2.61e-280	-	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
DOOMIPKP_01856	9.55e-88	-	-	-	-	-	-	-	-
DOOMIPKP_01857	1.86e-22	-	-	-	-	-	-	-	-
DOOMIPKP_01858	0.0	agl	3.2.1.20	GH31	G	ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 31 family
DOOMIPKP_01859	0.0	glcD	1.1.3.15	-	C	ko:K00104	ko00630,ko01100,ko01110,ko01120,ko01130,map00630,map01100,map01110,map01120,map01130	ko00000,ko00001,ko01000	FAD linked oxidases, C-terminal domain
DOOMIPKP_01860	1.83e-33	-	-	-	-	-	-	-	-
DOOMIPKP_01861	1.53e-35	-	-	-	-	-	-	-	-
DOOMIPKP_01862	1.95e-45	-	-	-	-	-	-	-	-
DOOMIPKP_01863	1.7e-70	-	-	-	S	-	-	-	Enterocin A Immunity
DOOMIPKP_01864	7.79e-186	racD	5.1.1.13	-	M	ko:K01779	ko00250,ko01054,map00250,map01054	ko00000,ko00001,ko01000	Belongs to the aspartate glutamate racemases family
DOOMIPKP_01865	0.0	murE	6.3.2.13, 6.3.2.7	-	M	ko:K01928,ko:K05362	ko00300,ko00550,ko01100,map00300,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
DOOMIPKP_01866	1.32e-270	-	-	-	T	-	-	-	His Kinase A (phosphoacceptor) domain
DOOMIPKP_01867	8.32e-157	vanR	-	-	K	-	-	-	response regulator
DOOMIPKP_01868	1.31e-51	-	-	-	S	-	-	-	HicB family
DOOMIPKP_01869	6.07e-261	-	-	-	L	-	-	-	Probable transposase
DOOMIPKP_01871	0.0	ndvA	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter
DOOMIPKP_01872	0.0	-	-	-	V	ko:K06147,ko:K06148	-	ko00000,ko02000	ABC transporter, ATP-binding protein
DOOMIPKP_01873	8.34e-139	-	-	-	S	-	-	-	Protein of unknown function (DUF1129)
DOOMIPKP_01874	6.88e-257	ychF	-	-	J	ko:K06942	-	ko00000,ko03009	ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
DOOMIPKP_01875	1.1e-59	yyzM	-	-	S	-	-	-	Bacterial protein of unknown function (DUF951)
DOOMIPKP_01876	6.08e-197	spo0J	-	-	K	ko:K03497	-	ko00000,ko03000,ko03036,ko04812	Belongs to the ParB family
DOOMIPKP_01877	4.99e-178	soj	-	-	D	ko:K03496	-	ko00000,ko03036,ko04812	Sporulation initiation inhibitor
DOOMIPKP_01878	7.14e-192	noc	-	-	K	ko:K03497	-	ko00000,ko03000,ko03036,ko04812	Belongs to the ParB family
DOOMIPKP_01879	3.66e-166	rsmG	2.1.1.170	-	J	ko:K03501	-	ko00000,ko01000,ko03009,ko03036	Specifically methylates the N7 position of a guanine in 16S rRNA
DOOMIPKP_01880	1.09e-84	cvpA	-	-	S	-	-	-	Colicin V production protein
DOOMIPKP_01882	1.83e-230	apbE	2.7.1.180	-	H	ko:K03734	-	ko00000,ko01000	Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
DOOMIPKP_01883	5.49e-193	-	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Tyrosine phosphatase family
DOOMIPKP_01884	5.42e-128	azr	1.5.1.36	-	S	ko:K22394	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	NADPH-dependent FMN reductase
DOOMIPKP_01885	1.39e-124	azo1	1.5.1.36, 1.7.1.6	-	S	ko:K03206,ko:K19784,ko:K22393	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	NADPH-dependent FMN reductase
DOOMIPKP_01886	1.07e-144	-	-	-	K	-	-	-	WHG domain
DOOMIPKP_01887	6.73e-51	-	-	-	-	-	-	-	-
DOOMIPKP_01888	0.0	pepD4	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
DOOMIPKP_01889	2.12e-132	lolD	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
DOOMIPKP_01890	2.47e-232	yxeA	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter permease
DOOMIPKP_01891	2.41e-118	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
DOOMIPKP_01892	3.9e-143	-	-	-	G	-	-	-	phosphoglycerate mutase
DOOMIPKP_01893	2.92e-182	-	-	-	S	ko:K06889	-	ko00000	Alpha/beta hydrolase family
DOOMIPKP_01894	7.18e-184	XK27_08125	-	-	S	ko:K09861	-	ko00000	Belongs to the UPF0246 family
DOOMIPKP_01895	5.5e-155	-	-	-	-	-	-	-	-
DOOMIPKP_01896	0.0	-	-	-	L	-	-	-	Transposase
DOOMIPKP_01897	6.58e-162	-	-	-	S	-	-	-	Phage Mu protein F like protein
DOOMIPKP_01898	4.74e-133	tnpR	-	-	L	-	-	-	Resolvase, N terminal domain
DOOMIPKP_01899	5.66e-68	-	-	-	L	-	-	-	Transposase DDE domain
DOOMIPKP_01900	2.05e-76	-	-	-	L	-	-	-	Transposase DDE domain
DOOMIPKP_01901	3.36e-109	-	-	-	L	-	-	-	Transposase DDE domain
DOOMIPKP_01902	3.29e-146	-	-	-	K	ko:K09017	-	ko00000,ko03000	Transcriptional regulator
DOOMIPKP_01903	0.0	-	-	-	M	ko:K01992	-	ko00000,ko00002,ko02000	Exporter of polyketide antibiotics
DOOMIPKP_01904	1.36e-214	ybhF_1	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter
DOOMIPKP_01905	4.68e-71	-	-	-	L	-	-	-	Putative transposase of IS4/5 family (DUF4096)
DOOMIPKP_01906	1.23e-44	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
DOOMIPKP_01907	0.0	galT	2.7.7.12	-	G	ko:K00965	ko00052,ko00520,ko01100,ko04917,map00052,map00520,map01100,map04917	ko00000,ko00001,ko00002,ko01000	UDP-glucose--hexose-1-phosphate uridylyltransferase
DOOMIPKP_01908	7.65e-147	galK	2.7.1.6	-	F	ko:K00849	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
DOOMIPKP_01909	2.25e-202	-	-	-	C	-	-	-	Domain of unknown function (DUF4931)
DOOMIPKP_01910	1.95e-271	-	-	-	S	-	-	-	Putative peptidoglycan binding domain
DOOMIPKP_01911	4.34e-22	-	-	-	-	-	-	-	-
DOOMIPKP_01912	2.6e-309	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
DOOMIPKP_01913	5.74e-167	-	-	-	S	-	-	-	membrane
DOOMIPKP_01914	6.23e-102	-	-	-	K	-	-	-	LytTr DNA-binding domain
DOOMIPKP_01915	1.15e-34	-	-	-	S	-	-	-	Sugar efflux transporter for intercellular exchange
DOOMIPKP_01916	0.0	dtpT	-	-	U	ko:K03305	-	ko00000	amino acid peptide transporter
DOOMIPKP_01917	0.0	pepN	3.4.11.2	-	E	ko:K01256	ko00480,ko01100,map00480,map01100	ko00000,ko00001,ko01000,ko01002	aminopeptidase
DOOMIPKP_01918	2.2e-79	lysM	-	-	M	-	-	-	LysM domain
DOOMIPKP_01919	3.24e-224	-	-	-	-	-	-	-	-
DOOMIPKP_01920	9.91e-284	mdtG2	-	-	EGP	ko:K08161	-	ko00000,ko02000	Transporter, major facilitator family protein
DOOMIPKP_01921	3.34e-117	ymdB	-	-	S	-	-	-	Macro domain protein
DOOMIPKP_01924	9.51e-84	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
DOOMIPKP_01925	1.39e-197	malG	-	-	P	ko:K15772	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
DOOMIPKP_01926	0.0	malF	-	-	P	ko:K15771	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
DOOMIPKP_01927	2.73e-282	-	-	-	G	ko:K15770	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding protein
DOOMIPKP_01928	4.23e-268	msmX	-	-	P	ko:K10112	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
DOOMIPKP_01929	4.64e-296	-	-	-	L	-	-	-	Transposase DDE domain
DOOMIPKP_01930	1.09e-148	pgmB	5.4.2.6	-	S	ko:K01838	ko00500,map00500	ko00000,ko00001,ko01000	beta-phosphoglucomutase
DOOMIPKP_01931	0.0	mapA	2.4.1.8	GH65	G	ko:K00691	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	hydrolase, family 65, central catalytic
DOOMIPKP_01932	0.0	nplT	3.2.1.133, 3.2.1.135, 3.2.1.54	GH13	G	ko:K01208	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 13 family
DOOMIPKP_01933	0.0	malA1	3.2.1.10, 3.2.1.20	GH13,GH31	G	ko:K01182,ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Alpha amylase, catalytic domain
DOOMIPKP_01934	2.49e-100	XK27_04775	-	-	S	ko:K09155	-	ko00000	PAS domain
DOOMIPKP_01935	1.58e-282	ackA	2.7.2.1	-	F	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
DOOMIPKP_01936	6.36e-230	yvdE	-	-	K	-	-	-	helix_turn _helix lactose operon repressor
DOOMIPKP_01937	7.48e-188	-	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Tyrosine phosphatase family
DOOMIPKP_01938	0.0	glpK	2.7.1.30	-	F	ko:K00864	ko00561,ko01100,ko03320,ko04626,map00561,map01100,map03320,map04626	ko00000,ko00001,ko01000,ko04147	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
DOOMIPKP_01939	2.61e-195	thiD	2.7.1.49, 2.7.4.7	-	H	ko:K00941	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Phosphomethylpyrimidine kinase
DOOMIPKP_01940	2.84e-35	-	-	-	-	-	-	-	-
DOOMIPKP_01941	1.31e-182	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
DOOMIPKP_01942	9.87e-62	yoeB	-	-	S	ko:K19158	-	ko00000,ko01000,ko02048	YoeB-like toxin of bacterial type II toxin-antitoxin system
DOOMIPKP_01943	2.45e-58	-	-	-	D	ko:K19159	-	ko00000,ko02048	Antitoxin component of a toxin-antitoxin (TA) module
DOOMIPKP_01944	4.36e-89	-	-	-	L	-	-	-	RelB antitoxin
DOOMIPKP_01946	4.51e-170	cobQ	-	-	S	ko:K07009	-	ko00000	glutamine amidotransferase
DOOMIPKP_01947	3.65e-109	-	-	-	M	-	-	-	NlpC/P60 family
DOOMIPKP_01950	3.73e-54	-	-	-	-	-	-	-	-
DOOMIPKP_01951	3.44e-210	-	-	-	EG	-	-	-	EamA-like transporter family
DOOMIPKP_01952	4.04e-212	-	-	-	EG	-	-	-	EamA-like transporter family
DOOMIPKP_01953	2.13e-151	yicL	-	-	EG	-	-	-	EamA-like transporter family
DOOMIPKP_01954	4.61e-138	-	-	-	-	-	-	-	-
DOOMIPKP_01955	2.14e-141	-	-	-	-	-	-	-	-
DOOMIPKP_01956	1.84e-238	-	-	-	S	-	-	-	DUF218 domain
DOOMIPKP_01957	0.0	yheS_2	-	-	S	ko:K18231,ko:K19349	ko02010,map02010	br01600,ko00000,ko00001,ko01504,ko02000	ATPases associated with a variety of cellular activities
DOOMIPKP_01958	3.49e-113	-	-	-	-	-	-	-	-
DOOMIPKP_01959	5.21e-73	-	-	-	-	-	-	-	-
DOOMIPKP_01960	7.26e-35	-	-	-	S	-	-	-	Protein conserved in bacteria
DOOMIPKP_01961	2.27e-71	-	-	-	S	-	-	-	protein encoded in hypervariable junctions of pilus gene clusters
DOOMIPKP_01962	2.44e-49	-	-	-	S	-	-	-	HicA toxin of bacterial toxin-antitoxin,
DOOMIPKP_01963	8.69e-314	purB	4.3.2.2	-	F	ko:K01756	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
DOOMIPKP_01964	0.0	purA	6.3.4.4	-	F	ko:K01939	ko00230,ko00250,ko01100,map00230,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
DOOMIPKP_01965	4.04e-240	guaC	1.7.1.7	-	F	ko:K00364	ko00230,map00230	ko00000,ko00001,ko01000	Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
DOOMIPKP_01968	4.34e-262	-	4.2.1.126	-	S	ko:K07106,ko:K09963	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Bacterial protein of unknown function (DUF871)
DOOMIPKP_01969	5.12e-242	asnA	6.3.1.1	-	F	ko:K01914	ko00250,ko00460,ko01100,ko01110,ko01230,map00250,map00460,map01100,map01110,map01230	ko00000,ko00001,ko01000	aspartate--ammonia ligase
DOOMIPKP_01970	9.16e-291	-	-	-	E	-	-	-	amino acid
DOOMIPKP_01971	8.09e-180	puuD	-	-	S	ko:K07010	-	ko00000,ko01002	peptidase C26
DOOMIPKP_01972	5.85e-225	-	-	-	S	-	-	-	PFAM Archaeal ATPase
DOOMIPKP_01973	1.76e-312	yifK	-	-	E	ko:K03293	-	ko00000	Amino acid permease
DOOMIPKP_01974	6.49e-310	aapA	-	-	E	ko:K03293,ko:K11737	-	ko00000,ko02000	Amino acid permease
DOOMIPKP_01975	4.18e-148	sipS3	3.4.21.89	-	U	ko:K03100	ko02024,ko03060,map02024,map03060	ko00000,ko00001,ko01000,ko01002	Belongs to the peptidase S26 family
DOOMIPKP_01976	5.49e-150	-	-	-	V	-	-	-	ABC transporter transmembrane region
DOOMIPKP_01977	5.66e-68	-	-	-	L	-	-	-	Transposase DDE domain
DOOMIPKP_01978	2.99e-208	-	-	-	L	-	-	-	Transposase DDE domain
DOOMIPKP_01979	0.0	clpE	-	-	O	ko:K03697,ko:K04086	-	ko00000,ko03110	AAA domain (Cdc48 subfamily)
DOOMIPKP_01980	1.93e-212	-	-	-	S	-	-	-	Alpha/beta hydrolase of unknown function (DUF915)
DOOMIPKP_01981	3.61e-303	pts13C	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
DOOMIPKP_01982	3.96e-160	-	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
DOOMIPKP_01983	0.0	ylbB	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter permease
DOOMIPKP_01984	1.96e-49	-	-	-	-	-	-	-	-
DOOMIPKP_01985	0.0	ytgP	-	-	S	ko:K03328	-	ko00000	Polysaccharide biosynthesis protein
DOOMIPKP_01986	2.22e-182	lysA2	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
DOOMIPKP_01987	6.14e-173	-	-	-	S	-	-	-	Protein of unknown function (DUF975)
DOOMIPKP_01988	1.73e-221	pbpX2	-	-	V	-	-	-	Beta-lactamase
DOOMIPKP_01989	4.79e-309	dltD	-	-	M	ko:K03740	ko01503,ko02020,ko05150,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01504	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
DOOMIPKP_01990	4.98e-48	dltC	6.1.1.13	-	J	ko:K14188	ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01000,ko01504	Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
DOOMIPKP_01991	1.91e-300	dltB	-	-	M	ko:K03739	ko01503,ko02020,ko05150,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01504	MBOAT, membrane-bound O-acyltransferase family
DOOMIPKP_01992	0.0	dltA	6.1.1.13	-	H	ko:K03367	ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01000,ko01504	Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
DOOMIPKP_01993	9.18e-27	-	-	-	S	-	-	-	D-Ala-teichoic acid biosynthesis protein
DOOMIPKP_01994	1.31e-63	-	-	-	-	-	-	-	-
DOOMIPKP_01995	2.8e-278	-	-	-	S	-	-	-	Membrane
DOOMIPKP_01996	3.41e-107	ykuL	-	-	S	-	-	-	(CBS) domain
DOOMIPKP_01997	0.0	cadA	-	-	P	-	-	-	P-type ATPase
DOOMIPKP_01998	5.71e-263	napA	-	-	P	-	-	-	Sodium/hydrogen exchanger family
DOOMIPKP_01999	2.49e-63	-	-	-	D	ko:K19159	-	ko00000,ko02048	Antitoxin component of a toxin-antitoxin (TA) module
DOOMIPKP_02000	8.63e-58	yoeB	-	-	S	ko:K19158	-	ko00000,ko01000,ko02048	YoeB-like toxin of bacterial type II toxin-antitoxin system
DOOMIPKP_02001	0.0	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC transporter transmembrane region
DOOMIPKP_02002	1.66e-101	-	-	-	S	-	-	-	Putative adhesin
DOOMIPKP_02003	9.87e-203	mutR	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
DOOMIPKP_02004	9.39e-71	-	-	-	-	-	-	-	-
DOOMIPKP_02005	2.94e-156	-	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
DOOMIPKP_02006	8.52e-247	-	-	-	S	-	-	-	DUF218 domain
DOOMIPKP_02007	0.0	-	-	-	V	ko:K02003,ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
DOOMIPKP_02008	0.0	ppc	4.1.1.31	-	H	ko:K01595	ko00620,ko00680,ko00710,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00710,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
DOOMIPKP_02009	5.9e-130	-	-	-	S	-	-	-	ECF transporter, substrate-specific component
DOOMIPKP_02010	1.69e-256	tcsA	-	-	S	ko:K02058,ko:K07335	-	ko00000,ko00002,ko02000	ABC transporter substrate-binding protein PnrA-like
DOOMIPKP_02011	3.28e-257	tcsA	-	-	S	ko:K02058,ko:K07335	-	ko00000,ko00002,ko02000	ABC transporter substrate-binding protein PnrA-like
DOOMIPKP_02012	0.0	mglA	3.6.3.17	-	S	ko:K02056,ko:K06400	-	ko00000,ko00002,ko01000,ko02000	ABC transporter
DOOMIPKP_02013	8.8e-262	mglC	-	-	S	ko:K02057	-	ko00000,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
DOOMIPKP_02014	3.63e-221	yufQ	-	-	S	ko:K02057	-	ko00000,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
DOOMIPKP_02015	1.78e-204	-	-	-	S	-	-	-	Aldo/keto reductase family
DOOMIPKP_02016	6.36e-171	nagB	3.5.99.6	-	G	ko:K02564	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
DOOMIPKP_02017	5.04e-147	dak	2.7.1.76	-	F	ko:K10353	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000	deoxynucleoside kinase
DOOMIPKP_02018	8.07e-164	dgk2	2.7.1.76	-	F	ko:K10353	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000	deoxynucleoside kinase
DOOMIPKP_02019	1.56e-92	-	-	-	-	-	-	-	-
DOOMIPKP_02020	8.93e-180	-	-	-	S	-	-	-	haloacid dehalogenase-like hydrolase
DOOMIPKP_02021	6.82e-292	pbuG	-	-	S	ko:K06901	-	ko00000,ko02000	permease
DOOMIPKP_02022	2.07e-119	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
DOOMIPKP_02023	1.42e-100	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
DOOMIPKP_02024	1.71e-187	-	-	-	S	-	-	-	ABC-2 family transporter protein
DOOMIPKP_02025	3.25e-165	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
DOOMIPKP_02026	5.67e-296	pbuG	-	-	S	ko:K06901	-	ko00000,ko02000	permease
DOOMIPKP_02027	3.69e-54	-	-	-	L	ko:K07473	-	ko00000,ko02048	Addiction module antitoxin, RelB DinJ family
DOOMIPKP_02028	5.05e-11	-	-	-	-	-	-	-	-
DOOMIPKP_02029	0.000104	-	-	-	S	ko:K07124	-	ko00000	KR domain
DOOMIPKP_02030	1.92e-52	-	-	-	S	ko:K07124	-	ko00000	Enoyl-(Acyl carrier protein) reductase
DOOMIPKP_02031	8.19e-44	yneE	-	-	K	-	-	-	Transcriptional regulator
DOOMIPKP_02032	4.88e-74	yneE	-	-	K	-	-	-	Transcriptional regulator
DOOMIPKP_02033	1.82e-286	-	-	-	S	ko:K07133	-	ko00000	cog cog1373
DOOMIPKP_02034	1.24e-186	-	-	-	S	-	-	-	haloacid dehalogenase-like hydrolase
DOOMIPKP_02035	4.08e-289	pbuG	-	-	S	ko:K06901	-	ko00000,ko02000	permease
DOOMIPKP_02036	3.36e-100	copY	-	-	K	ko:K02171	ko01501,map01501	ko00000,ko00001,ko00002,ko01504,ko03000	Penicillinase repressor
DOOMIPKP_02037	5.09e-85	-	-	-	S	-	-	-	Cupredoxin-like domain
DOOMIPKP_02038	4.44e-65	-	-	-	S	-	-	-	Cupredoxin-like domain
DOOMIPKP_02039	0.0	copA	3.6.3.3, 3.6.3.5, 3.6.3.54	-	P	ko:K01534,ko:K17686	ko01524,ko04016,map01524,map04016	ko00000,ko00001,ko01000	P-type ATPase
DOOMIPKP_02040	6.63e-147	crp2	-	-	K	ko:K10914,ko:K21562	ko02020,ko02024,ko02025,ko02026,ko05111,map02020,map02024,map02025,map02026,map05111	ko00000,ko00001,ko03000	helix_turn_helix, cAMP Regulatory protein
DOOMIPKP_02041	3.14e-137	-	-	-	-	-	-	-	-
DOOMIPKP_02042	3.57e-315	-	-	-	EGP	ko:K08368	-	ko00000,ko02000	Sugar (and other) transporter
DOOMIPKP_02043	6.46e-27	-	-	-	-	-	-	-	-
DOOMIPKP_02044	8.24e-271	-	-	-	-	-	-	-	-
DOOMIPKP_02045	3.95e-108	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
DOOMIPKP_02046	2.8e-43	-	-	-	K	-	-	-	helix_turn_helix, arabinose operon control protein
DOOMIPKP_02047	2.61e-164	-	-	-	GK	-	-	-	ROK family
DOOMIPKP_02048	4.67e-253	-	-	-	V	-	-	-	MatE
DOOMIPKP_02049	1.13e-307	-	-	-	V	-	-	-	MatE
DOOMIPKP_02050	3.91e-133	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
DOOMIPKP_02051	8.29e-76	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
DOOMIPKP_02052	4.89e-42	-	-	-	E	-	-	-	Zn peptidase
DOOMIPKP_02053	0.0	eriC	-	-	P	ko:K03281	-	ko00000	chloride
DOOMIPKP_02054	0.0	gnd	1.1.1.343, 1.1.1.44	-	H	ko:K00033	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
DOOMIPKP_02055	0.0	pox1	1.2.3.3	-	EH	ko:K00158	ko00620,ko01100,map00620,map01100	ko00000,ko00001,ko01000	Belongs to the TPP enzyme family
DOOMIPKP_02056	0.0	gidA	-	-	D	ko:K03495	-	ko00000,ko03016,ko03036	NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
DOOMIPKP_02057	0.0	mnmE	-	-	S	ko:K03650	-	ko00000,ko01000,ko03016	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
DOOMIPKP_02058	3.37e-192	yidC	-	-	U	ko:K03217	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044,ko03029	Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
DOOMIPKP_02059	1.87e-81	rnpA	3.1.26.5	-	J	ko:K03536	-	ko00000,ko01000,ko03016	RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
DOOMIPKP_02060	3.26e-23	rpmH	-	-	J	ko:K02914	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL34 family