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ORF_ID	e_value	Gene_name	EC_number	CAZy	COGs	KEGG_ko	KEGG_Pathway	BRITE	Description
PHIIFDDP_00001	1.09e-24	-	-	-	-	-	-	-	-
PHIIFDDP_00002	5.39e-204	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
PHIIFDDP_00003	5.4e-41	-	-	-	-	-	-	-	-
PHIIFDDP_00005	6.4e-189	-	-	-	S	-	-	-	Putative ABC-transporter type IV
PHIIFDDP_00007	0.0	-	-	-	M	-	-	-	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
PHIIFDDP_00008	1.19e-145	tnpA1	-	-	L	-	-	-	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
PHIIFDDP_00009	0.0	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
PHIIFDDP_00010	2.54e-225	ydbI	-	-	K	-	-	-	AI-2E family transporter
PHIIFDDP_00011	2.28e-133	-	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase
PHIIFDDP_00012	2.55e-26	-	-	-	-	-	-	-	-
PHIIFDDP_00013	1.34e-314	-	-	-	G	ko:K16211	-	ko00000,ko02000	Major Facilitator
PHIIFDDP_00014	1.54e-69	-	-	-	E	-	-	-	Zn peptidase
PHIIFDDP_00015	1.06e-16	-	-	-	S	-	-	-	SLAP domain
PHIIFDDP_00016	1e-58	-	-	-	-	-	-	-	-
PHIIFDDP_00017	3.52e-175	XK27_08845	-	-	S	ko:K05833	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PHIIFDDP_00018	3.9e-167	XK27_08840	-	-	U	ko:K05832	-	ko00000,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
PHIIFDDP_00019	8.24e-224	ABC-SBP	-	-	S	ko:K01989	-	ko00000,ko00002,ko02000	ABC transporter
PHIIFDDP_00020	2.51e-175	ysaA	3.1.3.5, 3.8.1.2	-	S	ko:K01560,ko:K07025,ko:K08723	ko00230,ko00240,ko00361,ko00625,ko00760,ko01100,ko01110,ko01120,map00230,map00240,map00361,map00625,map00760,map01100,map01110,map01120	ko00000,ko00001,ko01000	Haloacid dehalogenase-like hydrolase
PHIIFDDP_00021	9.06e-202	-	-	-	P	ko:K03284	-	ko00000,ko02000	CorA-like Mg2+ transporter protein
PHIIFDDP_00022	6.7e-205	yvgN	-	-	C	-	-	-	Aldo keto reductase
PHIIFDDP_00023	0.0	fusA1	-	-	J	-	-	-	elongation factor G
PHIIFDDP_00024	1.15e-194	-	3.1.3.102, 3.1.3.104	-	S	ko:K20861	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	haloacid dehalogenase-like hydrolase
PHIIFDDP_00025	3.92e-246	ldhA	1.1.1.28	-	C	ko:K03778,ko:K18347	ko00620,ko01120,ko01502,ko02020,map00620,map01120,map01502,map02020	ko00000,ko00001,ko00002,ko01000,ko01504	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PHIIFDDP_00026	2.7e-07	-	-	-	S	-	-	-	YSIRK type signal peptide
PHIIFDDP_00028	7.26e-204	xth	3.1.11.2	-	L	ko:K01142	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	exodeoxyribonuclease III
PHIIFDDP_00029	0.0	-	-	-	E	ko:K20265	ko02024,map02024	ko00000,ko00001,ko02000	amino acid
PHIIFDDP_00030	0.0	-	-	-	L	-	-	-	Helicase C-terminal domain protein
PHIIFDDP_00031	7.84e-260	pbpX	-	-	V	-	-	-	Beta-lactamase
PHIIFDDP_00032	1.43e-287	-	-	-	N	ko:K09384	-	ko00000	Uncharacterized conserved protein (DUF2075)
PHIIFDDP_00033	1.77e-93	def2	3.5.1.88	-	J	ko:K01462	-	ko00000,ko01000	Removes the formyl group from the N-terminal Met of newly synthesized proteins
PHIIFDDP_00034	6.69e-20	-	1.3.5.4	-	C	ko:K00244	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	ko00000,ko00001,ko00002,ko01000	FAD binding domain
PHIIFDDP_00035	1.8e-83	-	-	-	S	-	-	-	Phage derived protein Gp49-like (DUF891)
PHIIFDDP_00036	4.12e-56	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
PHIIFDDP_00037	9.51e-87	-	-	-	-	-	-	-	-
PHIIFDDP_00038	0.0	valS	6.1.1.9	-	J	ko:K01873	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
PHIIFDDP_00039	1.27e-308	folC	6.3.2.12, 6.3.2.17	-	H	ko:K11754	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the folylpolyglutamate synthase family
PHIIFDDP_00040	3.17e-164	-	-	-	S	-	-	-	Haloacid dehalogenase-like hydrolase
PHIIFDDP_00041	1.07e-150	radC	-	-	L	ko:K03630	-	ko00000	DNA repair protein
PHIIFDDP_00042	5.81e-226	mreB	-	-	D	ko:K03569	-	ko00000,ko02048,ko03036,ko04812	cell shape determining protein MreB
PHIIFDDP_00043	2.88e-189	mreC	-	-	M	ko:K03570	-	ko00000,ko03036	Involved in formation and maintenance of cell shape
PHIIFDDP_00044	1.33e-122	mreD	-	-	-	ko:K03571	-	ko00000,ko03036	-
PHIIFDDP_00045	1.4e-09	-	-	-	S	-	-	-	Protein of unknown function (DUF4044)
PHIIFDDP_00046	1.02e-72	-	-	-	S	-	-	-	Protein of unknown function (DUF3397)
PHIIFDDP_00047	5.63e-102	mraZ	-	-	K	ko:K03925	-	ko00000	Belongs to the MraZ family
PHIIFDDP_00048	4.45e-225	rsmH	2.1.1.199	-	J	ko:K03438	-	ko00000,ko01000,ko03009	Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
PHIIFDDP_00049	6.55e-72	ftsL	-	-	D	-	-	-	Cell division protein FtsL
PHIIFDDP_00050	0.0	pbpX	-	-	M	ko:K08724,ko:K12552,ko:K12556	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01011	Penicillin-binding Protein
PHIIFDDP_00051	3.12e-224	mraY	2.7.8.13	-	M	ko:K01000	ko00550,ko01100,ko01502,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
PHIIFDDP_00052	0.0	murD	6.3.2.9	-	M	ko:K01925	ko00471,ko00550,ko01100,map00471,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
PHIIFDDP_00053	1.16e-265	murG	2.4.1.227	GT28	M	ko:K02563	ko00550,ko01100,ko01502,ko04112,map00550,map01100,map01502,map04112	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
PHIIFDDP_00054	1.33e-195	divIB	-	-	D	ko:K03589	ko04112,map04112	ko00000,ko00001,ko03036	Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
PHIIFDDP_00055	3.67e-316	ftsA	-	-	D	ko:K03590	ko04112,map04112	ko00000,ko00001,ko03036,ko04812	Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
PHIIFDDP_00056	9.61e-305	ftsZ	-	-	D	ko:K03531	ko04112,map04112	ko00000,ko00001,ko02048,ko03036,ko04812	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
PHIIFDDP_00057	1.43e-96	sepF	-	-	D	ko:K09772	-	ko00000,ko03036	Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
PHIIFDDP_00058	2.42e-60	yggT	-	-	S	ko:K02221	-	ko00000,ko02044	YGGT family
PHIIFDDP_00059	9.84e-193	ylmH	-	-	S	-	-	-	S4 domain protein
PHIIFDDP_00060	1.55e-138	divIVA	-	-	D	ko:K04074	-	ko00000,ko03036	DivIVA domain protein
PHIIFDDP_00061	0.0	ileS	6.1.1.5	-	J	ko:K01870	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
PHIIFDDP_00062	2.32e-43	cspA	-	-	K	ko:K03704	-	ko00000,ko03000	'Cold-shock' DNA-binding domain
PHIIFDDP_00063	1.27e-134	nudF	3.6.1.13	-	L	ko:K01515	ko00230,map00230	ko00000,ko00001,ko01000	ADP-ribose pyrophosphatase
PHIIFDDP_00064	1.8e-57	-	-	-	-	-	-	-	-
PHIIFDDP_00065	2.05e-163	mtnN	3.2.2.9	-	E	ko:K01243	ko00270,ko01100,ko01230,map00270,map01100,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
PHIIFDDP_00066	1.62e-276	iscS	2.8.1.7	-	E	ko:K04487	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko02048,ko03016,ko03029	Aminotransferase class V
PHIIFDDP_00067	2.97e-76	XK27_04120	-	-	S	-	-	-	Putative amino acid metabolism
PHIIFDDP_00068	1.9e-279	mnmA	2.8.1.13	-	J	ko:K00566	ko04122,map04122	ko00000,ko00001,ko01000,ko03016	Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
PHIIFDDP_00069	1.35e-162	pgm	-	-	G	-	-	-	Phosphoglycerate mutase family
PHIIFDDP_00070	2.31e-148	-	-	-	S	-	-	-	repeat protein
PHIIFDDP_00071	0.0	recD2	3.1.11.5	-	L	ko:K03581	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
PHIIFDDP_00072	0.0	-	-	-	L	-	-	-	Nuclease-related domain
PHIIFDDP_00073	1.25e-234	ytlR	-	-	I	-	-	-	Diacylglycerol kinase catalytic domain
PHIIFDDP_00074	0.0	rnjA	-	-	J	ko:K12574	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PHIIFDDP_00075	1.09e-46	ykzG	-	-	S	-	-	-	Belongs to the UPF0356 family
PHIIFDDP_00076	1.61e-130	def	3.5.1.88	-	J	ko:K01462	-	ko00000,ko01000	Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
PHIIFDDP_00077	0.0	typA	-	-	T	ko:K06207	-	ko00000	GTP-binding protein TypA
PHIIFDDP_00078	3.35e-269	ftsW	-	-	D	ko:K03588	ko04112,map04112	ko00000,ko00001,ko02000,ko03036	Belongs to the SEDS family
PHIIFDDP_00079	9.94e-71	ylbG	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2129)
PHIIFDDP_00080	5.21e-126	rsmD	2.1.1.171	-	L	ko:K08316	-	ko00000,ko01000,ko03009	RNA methyltransferase, RsmD family
PHIIFDDP_00081	7.07e-107	coaD	2.7.7.3	-	H	ko:K00954	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
PHIIFDDP_00082	5.15e-247	lon	-	-	T	ko:K07177	ko02024,map02024	ko00000,ko00001,ko01002	Belongs to the peptidase S16 family
PHIIFDDP_00083	5.45e-126	comEA	-	-	L	ko:K02237	-	ko00000,ko00002,ko02044	Competence protein ComEA
PHIIFDDP_00084	0.0	comEC	-	-	S	ko:K02238	-	ko00000,ko00002,ko02044	Competence protein ComEC
PHIIFDDP_00085	2.57e-226	holA	2.7.7.7	-	L	ko:K02340	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III delta subunit
PHIIFDDP_00086	6.28e-47	rpsT	-	-	J	ko:K02968	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 16S ribosomal RNA
PHIIFDDP_00087	7.11e-57	rpsO	-	-	J	ko:K02956	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
PHIIFDDP_00088	0.0	rnjB	-	-	J	ko:K12574	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PHIIFDDP_00089	1.98e-193	-	-	-	-	-	-	-	-
PHIIFDDP_00090	4.06e-287	tuf	-	-	J	ko:K02358,ko:K15771	ko02010,map02010	ko00000,ko00001,ko00002,ko02000,ko03012,ko03029,ko04147	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
PHIIFDDP_00091	1.09e-292	tig	-	-	D	ko:K03545	-	ko00000	Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
PHIIFDDP_00092	3.04e-297	clpX	-	-	O	ko:K03544	ko04112,map04112	ko00000,ko00001,ko03110	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
PHIIFDDP_00093	3.9e-137	engB	-	-	D	ko:K03978	-	ko00000,ko03036	Necessary for normal cell division and for the maintenance of normal septation
PHIIFDDP_00094	1.9e-28	potE	-	-	E	-	-	-	Amino Acid
PHIIFDDP_00095	3.29e-157	potE	-	-	E	-	-	-	Amino Acid
PHIIFDDP_00096	1.04e-244	dapF	5.1.1.7	-	E	ko:K01778	ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
PHIIFDDP_00097	0.0	lysC	2.7.2.4	-	E	ko:K00928	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the aspartokinase family
PHIIFDDP_00098	5.89e-314	lysA	4.1.1.20	-	E	ko:K01586	ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
PHIIFDDP_00099	2.12e-105	dapH	2.3.1.117, 2.3.1.89	-	E	ko:K00674,ko:K05822	ko00300,ko01100,ko01110,ko01120,ko01230,map00300,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
PHIIFDDP_00100	1.4e-281	hipO	3.5.1.47	-	E	ko:K05823	ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000,ko01002	Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
PHIIFDDP_00101	5.21e-225	dapA	4.3.3.7	-	E	ko:K01714	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
PHIIFDDP_00102	6.89e-185	dapB	1.17.1.8	-	E	ko:K00215	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
PHIIFDDP_00103	3.15e-277	aspC	-	-	E	ko:K00841	ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase
PHIIFDDP_00104	2.04e-253	asd	1.2.1.11	-	E	ko:K00133	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
PHIIFDDP_00105	1.53e-251	pbpX1	-	-	V	-	-	-	Beta-lactamase
PHIIFDDP_00106	0.0	-	-	-	I	-	-	-	Protein of unknown function (DUF2974)
PHIIFDDP_00107	1.83e-54	-	-	-	C	-	-	-	FMN_bind
PHIIFDDP_00108	1.1e-108	-	-	-	-	-	-	-	-
PHIIFDDP_00109	3.14e-226	iunH	3.2.2.1	-	F	ko:K01239	ko00230,ko00760,ko01100,map00230,map00760,map01100	ko00000,ko00001,ko01000	inosine-uridine preferring nucleoside hydrolase
PHIIFDDP_00110	6.11e-118	alkD	-	-	L	-	-	-	DNA alkylation repair enzyme
PHIIFDDP_00111	0.0	pbg4	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
PHIIFDDP_00112	3.83e-165	-	-	-	K	ko:K03492	-	ko00000,ko03000	UTRA domain
PHIIFDDP_00113	1.32e-74	pts20B	2.7.1.196, 2.7.1.205	-	G	ko:K02760	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
PHIIFDDP_00114	7.88e-79	celC	2.7.1.196, 2.7.1.205	-	G	ko:K02759	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose Cellobiose specific IIA subunit
PHIIFDDP_00115	2.1e-109	-	-	-	-	-	-	-	-
PHIIFDDP_00116	0.0	celD	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PHIIFDDP_00117	4.04e-94	-	-	-	S	-	-	-	Domain of unknown function (DUF3284)
PHIIFDDP_00118	0.0	-	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
PHIIFDDP_00119	4.04e-154	-	-	-	K	ko:K03492	-	ko00000,ko03000	UTRA
PHIIFDDP_00120	3.62e-284	pts23C	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PHIIFDDP_00121	0.0	pbg6	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
PHIIFDDP_00122	4.27e-175	ypbG	2.7.1.2	-	GK	ko:K00845	ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	ROK family
PHIIFDDP_00123	7.07e-112	yfhC	-	-	C	-	-	-	nitroreductase
PHIIFDDP_00124	1.63e-127	-	-	-	S	-	-	-	Domain of unknown function (DUF4767)
PHIIFDDP_00125	3.52e-311	eno	4.2.1.11	-	G	ko:K01689	ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066	ko00000,ko00001,ko00002,ko01000,ko03019,ko04147	Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
PHIIFDDP_00126	1.28e-189	-	-	-	S	-	-	-	Uncharacterised protein, DegV family COG1307
PHIIFDDP_00127	8.23e-132	-	-	-	I	-	-	-	PAP2 superfamily
PHIIFDDP_00128	7.29e-245	cbh	3.5.1.24	-	M	ko:K01442	ko00120,ko00121,ko01100,map00120,map00121,map01100	ko00000,ko00001,ko01000	Linear amide C-N hydrolase, choloylglycine hydrolase family protein
PHIIFDDP_00130	1.77e-220	-	-	-	S	-	-	-	Conserved hypothetical protein 698
PHIIFDDP_00131	1.38e-86	-	-	-	S	-	-	-	Pyridoxamine 5'-phosphate oxidase
PHIIFDDP_00132	0.0	cadA	3.6.3.3, 3.6.3.5	-	P	ko:K01534	-	ko00000,ko01000	E1-E2 ATPase
PHIIFDDP_00133	4.22e-41	-	-	-	C	-	-	-	Heavy-metal-associated domain
PHIIFDDP_00134	1.45e-102	dpsB	-	-	P	-	-	-	Belongs to the Dps family
PHIIFDDP_00135	2.6e-110	fnr	-	-	K	ko:K21562	-	ko00000,ko03000	Transcriptional regulator, Crp Fnr family
PHIIFDDP_00136	1.85e-164	yobV3	-	-	K	-	-	-	WYL domain
PHIIFDDP_00137	5.61e-72	-	-	-	S	-	-	-	pyridoxamine 5-phosphate
PHIIFDDP_00138	1.39e-110	dps	-	-	P	ko:K04047	-	ko00000,ko03036	Belongs to the Dps family
PHIIFDDP_00139	1.95e-20	-	2.3.1.128	-	K	ko:K03790	-	ko00000,ko01000,ko03009	Acetyltransferase (GNAT) domain
PHIIFDDP_00141	0.000263	-	1.3.5.4	-	C	ko:K00244	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	ko00000,ko00001,ko00002,ko01000	PFAM fumarate reductase succinate dehydrogenase flavoprotein domain protein
PHIIFDDP_00142	3.47e-141	-	-	-	S	ko:K07025	-	ko00000	Haloacid dehalogenase-like hydrolase
PHIIFDDP_00143	4.33e-116	-	-	-	S	ko:K11621	ko02020,map02020	ko00000,ko00001	Putative adhesin
PHIIFDDP_00144	1.86e-103	-	-	-	K	ko:K03827	-	ko00000,ko01000	Acetyltransferase (GNAT) domain
PHIIFDDP_00145	4.37e-302	mepA	-	-	V	ko:K18908	-	ko00000,ko00002,ko01504,ko02000	MATE efflux family protein
PHIIFDDP_00146	3.65e-114	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
PHIIFDDP_00147	2.16e-123	ykoE	-	-	S	ko:K16925	-	ko00000,ko00002,ko02000	ABC-type cobalt transport system, permease component
PHIIFDDP_00148	0.0	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
PHIIFDDP_00150	6.58e-79	-	-	-	M	-	-	-	Peptidase family M1 domain
PHIIFDDP_00151	3.28e-195	-	-	-	-	-	-	-	-
PHIIFDDP_00153	3.83e-314	-	-	-	M	-	-	-	Glycosyl transferase
PHIIFDDP_00154	3.44e-261	-	-	-	G	-	-	-	Glycosyl hydrolases family 8
PHIIFDDP_00155	9.32e-121	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
PHIIFDDP_00156	3.09e-102	-	2.7.7.49	-	L	ko:K00986	-	ko00000,ko01000	PFAM RNA-directed DNA polymerase (Reverse transcriptase)
PHIIFDDP_00157	1.04e-39	-	2.7.7.49	-	L	ko:K00986	-	ko00000,ko01000	PFAM RNA-directed DNA polymerase (Reverse transcriptase)
PHIIFDDP_00158	1.15e-104	ribH	2.5.1.78	-	H	ko:K00794	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin
PHIIFDDP_00159	9.25e-291	ribBA	3.5.4.25, 4.1.99.12	-	H	ko:K14652	ko00740,ko00790,ko01100,ko01110,map00740,map00790,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate
PHIIFDDP_00160	2.16e-135	ribE	2.5.1.9	-	H	ko:K00793	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Riboflavin synthase
PHIIFDDP_00161	4.53e-257	ribD	1.1.1.193, 3.5.4.26	-	H	ko:K11752	ko00740,ko01100,ko01110,ko02024,map00740,map01100,map01110,map02024	ko00000,ko00001,ko00002,ko01000	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
PHIIFDDP_00162	1.8e-178	dhrS4	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Oxidoreductase, short chain dehydrogenase reductase family protein
PHIIFDDP_00163	4.34e-85	-	-	-	S	-	-	-	Protein of unknown function (DUF3021)
PHIIFDDP_00164	8.59e-98	-	-	-	K	-	-	-	LytTr DNA-binding domain
PHIIFDDP_00165	1.57e-161	-	-	-	K	-	-	-	Transcriptional regulator
PHIIFDDP_00166	2.91e-58	-	-	-	S	-	-	-	Alpha beta hydrolase
PHIIFDDP_00167	0.0	yjcA	-	-	S	ko:K19350	ko02010,map02010	ko00000,ko00001,ko01504,ko02000	ABC transporter
PHIIFDDP_00168	4.04e-143	ybbB	-	-	S	-	-	-	Protein of unknown function (DUF1211)
PHIIFDDP_00169	8.76e-142	ltrA	-	-	S	-	-	-	Bacterial low temperature requirement A protein (LtrA)
PHIIFDDP_00170	5.32e-154	yjhB	3.6.1.13	-	F	ko:K01515	ko00230,map00230	ko00000,ko00001,ko01000	NUDIX domain
PHIIFDDP_00171	6.08e-309	brnQ	-	-	U	ko:K03311	-	ko00000	Component of the transport system for branched-chain amino acids
PHIIFDDP_00172	0.0	-	-	-	L	-	-	-	Plasmid pRiA4b ORF-3-like protein
PHIIFDDP_00173	4.96e-113	tpx	1.11.1.15	-	O	ko:K11065	-	ko00000,ko01000	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
PHIIFDDP_00174	3.11e-07	-	-	-	K	-	-	-	Bacterial regulatory helix-turn-helix protein, lysR family
PHIIFDDP_00175	1.52e-150	rbtT	-	-	P	ko:K13021	-	ko00000,ko02000	Major Facilitator Superfamily
PHIIFDDP_00176	1.4e-262	XK27_00915	-	-	C	-	-	-	Luciferase-like monooxygenase
PHIIFDDP_00177	7.94e-114	-	-	-	K	-	-	-	GNAT family
PHIIFDDP_00178	1.4e-159	-	-	-	S	-	-	-	Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
PHIIFDDP_00180	6.04e-49	-	-	-	-	-	-	-	-
PHIIFDDP_00181	0.0	-	-	-	P	ko:K06148	-	ko00000,ko02000	ABC transporter
PHIIFDDP_00182	0.0	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
PHIIFDDP_00183	0.0	yifK	-	-	E	ko:K03293	-	ko00000	Amino acid permease
PHIIFDDP_00184	1.22e-229	thyA	2.1.1.45	-	F	ko:K00560	ko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523	ko00000,ko00001,ko00002,ko01000	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
PHIIFDDP_00185	4.06e-123	folA	1.5.1.3	-	H	ko:K00287	ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523	ko00000,ko00001,ko00002,ko01000	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
PHIIFDDP_00186	0.0	aha1	-	-	P	ko:K12952	-	ko00000,ko01000	E1-E2 ATPase
PHIIFDDP_00187	1.33e-225	-	-	-	F	ko:K15051	-	ko00000	DNA/RNA non-specific endonuclease
PHIIFDDP_00188	1.03e-203	metQ	-	-	P	ko:K02073	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the nlpA lipoprotein family
PHIIFDDP_00189	5.74e-243	metN	-	-	P	ko:K02071	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
PHIIFDDP_00190	2.34e-122	metI	-	-	P	ko:K02072	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
PHIIFDDP_00191	0.0	fumC	4.2.1.2	-	C	ko:K01679	ko00020,ko00620,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko04934,ko05200,ko05211,map00020,map00620,map00720,map01100,map01110,map01120,map01130,map01200,map04934,map05200,map05211	ko00000,ko00001,ko00002,ko01000	Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
PHIIFDDP_00192	6.08e-309	frdA	1.3.5.4	-	C	ko:K00244	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	ko00000,ko00001,ko00002,ko01000	FAD binding domain
PHIIFDDP_00193	1.66e-217	ldh	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	Belongs to the LDH MDH superfamily. LDH family
PHIIFDDP_00194	0.0	pepC4	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	Peptidase C1-like family
PHIIFDDP_00195	5.26e-171	-	-	-	H	-	-	-	Aldolase/RraA
PHIIFDDP_00196	0.0	citP	-	-	P	ko:K03319	-	ko00000	Sodium:sulfate symporter transmembrane region
PHIIFDDP_00197	1.2e-196	-	-	-	I	-	-	-	Alpha/beta hydrolase family
PHIIFDDP_00198	6.29e-250	citC	6.2.1.22	-	H	ko:K01910	ko02020,map02020	ko00000,ko00001,ko01000	Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
PHIIFDDP_00199	6.52e-59	citD	-	-	C	ko:K01646	ko02020,map02020	ko00000,ko00001	Covalent carrier of the coenzyme of citrate lyase
PHIIFDDP_00200	4.4e-215	citE	4.1.3.34	-	G	ko:K01644	ko02020,map02020	ko00000,ko00001,ko01000	Belongs to the HpcH HpaI aldolase family
PHIIFDDP_00201	0.0	citF	2.8.3.10	-	H	ko:K01643	ko02020,map02020	ko00000,ko00001,ko01000	Citrate (pro-3S)-lyase alpha chain
PHIIFDDP_00202	1.24e-93	ytwI	-	-	S	-	-	-	Protein of unknown function (DUF441)
PHIIFDDP_00203	1.46e-31	-	-	-	-	-	-	-	-
PHIIFDDP_00204	2.58e-189	cbiQ	-	-	P	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	cobalt transport
PHIIFDDP_00205	0.0	ykoD	-	-	P	ko:K16786,ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
PHIIFDDP_00206	3.64e-123	-	-	-	S	ko:K16924	-	ko00000,ko00002,ko02000	UPF0397 protein
PHIIFDDP_00207	8.1e-87	-	-	-	S	-	-	-	Domain of unknown function DUF1828
PHIIFDDP_00208	7.91e-14	-	-	-	-	-	-	-	-
PHIIFDDP_00209	2.93e-67	-	-	-	-	-	-	-	-
PHIIFDDP_00210	3.52e-225	citR	-	-	K	-	-	-	Putative sugar-binding domain
PHIIFDDP_00211	0.0	-	-	-	S	-	-	-	Putative threonine/serine exporter
PHIIFDDP_00212	1.3e-115	ybaK	-	-	S	ko:K03976	-	ko00000,ko01000,ko03016	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
PHIIFDDP_00213	2.78e-223	prmA	-	-	J	ko:K02687	-	ko00000,ko01000,ko03009	Ribosomal protein L11 methyltransferase
PHIIFDDP_00214	9.32e-81	-	-	-	-	-	-	-	-
PHIIFDDP_00215	0.0	relA	2.7.6.5	-	KT	ko:K00951	ko00230,map00230	ko00000,ko00001,ko01000	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
PHIIFDDP_00216	1.8e-99	dtd	-	-	J	ko:K07560	-	ko00000,ko01000,ko03016	rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
PHIIFDDP_00217	4.28e-312	hisS	6.1.1.21	-	J	ko:K01892	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	histidyl-tRNA synthetase
PHIIFDDP_00218	0.0	aspS	6.1.1.12	-	J	ko:K01876	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
PHIIFDDP_00219	5.51e-284	aspC	-	-	E	ko:K00841	ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase
PHIIFDDP_00220	5.43e-276	coaBC	4.1.1.36, 6.3.2.5	-	H	ko:K01598,ko:K13038	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
PHIIFDDP_00221	1.37e-57	-	-	-	S	-	-	-	reductase
PHIIFDDP_00222	1.66e-119	-	-	-	S	-	-	-	reductase
PHIIFDDP_00223	1.1e-191	yxeH	-	-	S	-	-	-	hydrolase
PHIIFDDP_00224	4.85e-232	gyaR	1.1.1.26, 1.1.1.399, 1.1.1.95	-	CH	ko:K00015,ko:K00058	ko00260,ko00630,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00260,map00630,map00680,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PHIIFDDP_00225	0.0	yhdG	-	-	E	ko:K03294	-	ko00000	Amino Acid
PHIIFDDP_00226	3.87e-141	yngC	-	-	S	-	-	-	SNARE associated Golgi protein
PHIIFDDP_00227	0.0	uvrC	-	-	L	ko:K03703	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
PHIIFDDP_00228	1.88e-309	obg	-	-	S	ko:K03979	-	ko00000,ko01000,ko03009	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
PHIIFDDP_00229	0.0	oatA	-	-	I	-	-	-	Acyltransferase
PHIIFDDP_00230	1.75e-225	rnz	3.1.26.11	-	J	ko:K00784	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
PHIIFDDP_00231	8.69e-186	-	-	-	S	ko:K07124	-	ko00000	Belongs to the short-chain dehydrogenases reductases (SDR) family
PHIIFDDP_00232	5.14e-38	rpmF	-	-	J	ko:K02911	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Belongs to the bacterial ribosomal protein bL32 family
PHIIFDDP_00233	0.0	yfkN	3.1.3.6, 3.1.4.16	-	F	ko:K01119	ko00230,ko00240,map00230,map00240	ko00000,ko00001,ko01000	Belongs to the 5'-nucleotidase family
PHIIFDDP_00234	1.25e-38	-	-	-	S	-	-	-	Protein of unknown function (DUF2929)
PHIIFDDP_00235	0.0	dnaE	2.7.7.7	-	L	ko:K02337	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase
PHIIFDDP_00236	5.46e-233	pfkA	2.7.1.11	-	F	ko:K00850	ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04152,ko05230,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04152,map05230	ko00000,ko00001,ko00002,ko01000,ko01009,ko03019	Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
PHIIFDDP_00237	0.0	pyk	2.7.1.40	-	G	ko:K00873	ko00010,ko00230,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko04930,ko05165,ko05203,ko05230,map00010,map00230,map00620,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map04930,map05165,map05203,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Belongs to the pyruvate kinase family
PHIIFDDP_00238	5.15e-215	yitL	-	-	S	ko:K00243	-	ko00000	S1 domain
PHIIFDDP_00239	1.73e-215	xerD	-	-	D	ko:K04763	-	ko00000,ko03036	recombinase XerD
PHIIFDDP_00240	7.97e-82	ribT	-	-	K	ko:K02859	-	ko00000	COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PHIIFDDP_00241	1.81e-169	scpA	-	-	D	ko:K05896	-	ko00000,ko03036	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
PHIIFDDP_00242	7.57e-135	scpB	-	-	D	ko:K06024	-	ko00000,ko03036	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
PHIIFDDP_00243	3.82e-167	rluB	5.4.99.22	-	J	ko:K06178	-	ko00000,ko01000,ko03009	Belongs to the pseudouridine synthase RsuA family
PHIIFDDP_00244	8.49e-146	ribU	-	-	U	-	-	-	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
PHIIFDDP_00245	1.13e-41	-	-	-	M	-	-	-	Lysin motif
PHIIFDDP_00246	1.96e-148	cmk	2.7.4.25	-	F	ko:K00945	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the cytidylate kinase family. Type 1 subfamily
PHIIFDDP_00247	4.02e-281	rpsA	-	-	J	ko:K02945	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein S1
PHIIFDDP_00248	1.34e-314	der	-	-	S	ko:K03977	-	ko00000,ko03009	GTPase that plays an essential role in the late steps of ribosome biogenesis
PHIIFDDP_00249	8.21e-57	hup	-	-	L	ko:K03530	-	ko00000,ko03032,ko03036,ko03400	Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
PHIIFDDP_00250	3.52e-293	XK27_05225	-	-	S	-	-	-	Tetratricopeptide repeat protein
PHIIFDDP_00251	0.0	cls	-	-	I	ko:K06131	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PHIIFDDP_00252	0.0	-	-	-	V	-	-	-	ABC transporter transmembrane region
PHIIFDDP_00253	8.62e-66	-	-	-	-	-	-	-	-
PHIIFDDP_00254	1.76e-136	yokL3	-	-	J	-	-	-	Acetyltransferase (GNAT) domain
PHIIFDDP_00255	2.72e-102	-	-	-	-	-	-	-	-
PHIIFDDP_00256	5.05e-192	-	-	-	S	-	-	-	Protein of unknown function (DUF2785)
PHIIFDDP_00257	4.34e-63	-	-	-	S	-	-	-	MazG-like family
PHIIFDDP_00258	6.02e-77	-	-	-	-	-	-	-	-
PHIIFDDP_00259	4.56e-33	-	-	-	S	-	-	-	Protein of unknown function (DUF3923)
PHIIFDDP_00260	8.89e-149	-	-	-	S	-	-	-	Fic/DOC family
PHIIFDDP_00261	1.45e-138	glsA	3.5.1.2	-	E	ko:K01425	ko00220,ko00250,ko00471,ko01100,ko04724,ko04727,ko04964,ko05206,ko05230,map00220,map00250,map00471,map01100,map04724,map04727,map04964,map05206,map05230	ko00000,ko00001,ko01000	Belongs to the glutaminase family
PHIIFDDP_00262	5.14e-291	-	-	-	-	-	-	-	-
PHIIFDDP_00263	4.16e-114	rimL	-	-	J	ko:K03817	-	ko00000,ko01000,ko03009	Acetyltransferase (GNAT) domain
PHIIFDDP_00264	8.94e-177	-	-	-	S	-	-	-	Alpha/beta hydrolase family
PHIIFDDP_00265	3.72e-85	yxaM	-	-	EGP	-	-	-	Major facilitator Superfamily
PHIIFDDP_00266	3.15e-36	yxaM	-	-	EGP	-	-	-	Major facilitator Superfamily
PHIIFDDP_00267	6.21e-73	codA	-	-	F	-	-	-	Cytidine and deoxycytidylate deaminase zinc-binding region
PHIIFDDP_00268	4.56e-154	-	-	-	S	-	-	-	F420-0:Gamma-glutamyl ligase
PHIIFDDP_00269	5.25e-105	-	-	-	S	-	-	-	AAA domain
PHIIFDDP_00270	1.56e-178	-	-	-	F	-	-	-	Phosphorylase superfamily
PHIIFDDP_00271	4.01e-186	-	-	-	F	-	-	-	Phosphorylase superfamily
PHIIFDDP_00272	5.92e-191	-	2.3.1.81	-	V	ko:K00662	-	ko00000,ko01000,ko01504	Aminoglycoside 3-N-acetyltransferase
PHIIFDDP_00273	8.16e-104	-	-	-	E	-	-	-	amino acid
PHIIFDDP_00274	6.53e-129	yagE	-	-	E	-	-	-	Amino acid permease
PHIIFDDP_00275	3.9e-111	-	3.4.21.96	-	S	ko:K01361	-	ko00000,ko01000,ko01002,ko03110	SLAP domain
PHIIFDDP_00276	8.13e-206	XK27_10395	-	-	S	-	-	-	Uncharacterised 5xTM membrane BCR, YitT family COG1284
PHIIFDDP_00277	5.13e-287	cca	2.7.7.72	-	J	ko:K00974	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
PHIIFDDP_00278	1.8e-143	hlyIII	-	-	S	ko:K11068	-	ko00000,ko02042	protein, hemolysin III
PHIIFDDP_00279	1.01e-189	degV3	-	-	S	-	-	-	Uncharacterised protein, DegV family COG1307
PHIIFDDP_00280	9.85e-49	yozE	-	-	S	-	-	-	Belongs to the UPF0346 family
PHIIFDDP_00281	2.16e-53	-	-	-	P	-	-	-	NhaP-type Na H and K H
PHIIFDDP_00282	1.5e-235	nhaP4	-	-	P	ko:K03316	-	ko00000	Sodium proton antiporter
PHIIFDDP_00283	1.84e-199	rbgA	-	-	S	ko:K14540	-	ko00000,ko03009	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
PHIIFDDP_00284	8.96e-172	rnhB	3.1.26.4	-	L	ko:K03470	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PHIIFDDP_00285	1.23e-194	dprA	-	-	LU	ko:K04096	-	ko00000	DNA protecting protein DprA
PHIIFDDP_00286	0.0	topA	5.99.1.2	-	L	ko:K03168	-	ko00000,ko01000,ko03032,ko03400	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
PHIIFDDP_00287	1.42e-315	trmFO	2.1.1.74	-	J	ko:K04094	-	ko00000,ko01000,ko03016,ko03036	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
PHIIFDDP_00288	7.31e-181	xerC	-	-	D	ko:K03733,ko:K04763	-	ko00000,ko03036	Phage integrase, N-terminal SAM-like domain
PHIIFDDP_00289	2.7e-115	hslV	3.4.25.2	-	O	ko:K01419	-	ko00000,ko01000,ko01002	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
PHIIFDDP_00290	1.63e-312	hslU	-	-	O	ko:K03667	-	ko00000,ko03110	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
PHIIFDDP_00291	9.4e-232	lacX	5.1.3.3	-	G	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Aldose 1-epimerase
PHIIFDDP_00292	1.62e-95	-	-	-	C	-	-	-	Aldo keto reductase
PHIIFDDP_00293	1.53e-121	-	-	-	M	-	-	-	LysM domain protein
PHIIFDDP_00294	5.49e-197	-	-	-	L	-	-	-	Phage integrase, N-terminal SAM-like domain
PHIIFDDP_00295	5.37e-88	crcB1	-	-	U	ko:K06199	-	ko00000,ko02000	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PHIIFDDP_00296	1.25e-85	crcB	-	-	U	ko:K06199	-	ko00000,ko02000	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PHIIFDDP_00297	1.2e-14	mmuM	2.1.1.10	-	H	ko:K00547	ko00270,ko01100,ko01110,map00270,map01100,map01110	ko00000,ko00001,ko01000	homocysteine S-methyltransferase
PHIIFDDP_00298	1.85e-146	ybgF	-	-	E	ko:K02205,ko:K03293,ko:K16235,ko:K16236	-	ko00000,ko02000	amino acid
PHIIFDDP_00299	0.0	pepV	3.5.1.18	-	E	ko:K01270,ko:K01274,ko:K01439	ko00300,ko00480,ko01100,ko01120,ko01230,map00300,map00480,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000,ko01002	dipeptidase PepV
PHIIFDDP_00300	1.93e-121	-	-	-	C	-	-	-	Pyridoxamine 5'-phosphate oxidase
PHIIFDDP_00301	0.0	-	-	-	E	-	-	-	Amino acid permease
PHIIFDDP_00302	0.0	speA	4.1.1.17, 4.1.1.18, 4.1.1.19	-	E	ko:K01581,ko:K01582,ko:K01585	ko00310,ko00330,ko00480,ko00960,ko01100,ko01110,ko01130,map00310,map00330,map00480,map00960,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Orn/Lys/Arg decarboxylase, C-terminal domain
PHIIFDDP_00303	3.65e-313	ynbB	-	-	P	-	-	-	aluminum resistance
PHIIFDDP_00304	0.0	recQ	3.6.4.12	-	L	ko:K03654	ko03018,map03018	ko00000,ko00001,ko01000,ko03400	ATP-dependent DNA helicase RecQ
PHIIFDDP_00305	8.83e-107	-	-	-	C	-	-	-	Flavodoxin
PHIIFDDP_00306	0.0	uvrA2	-	-	L	ko:K03701	ko03420,map03420	ko00000,ko00001,ko03400	excinuclease ABC, A subunit
PHIIFDDP_00307	9.17e-241	mmuM	2.1.1.10	-	H	ko:K00547	ko00270,ko01100,ko01110,map00270,map01100,map01110	ko00000,ko00001,ko01000	homocysteine S-methyltransferase
PHIIFDDP_00308	1.15e-145	-	-	-	I	-	-	-	Acid phosphatase homologues
PHIIFDDP_00309	3.21e-104	yvbK	-	-	K	-	-	-	COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PHIIFDDP_00310	7.07e-116	maa3	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	transferase hexapeptide repeat
PHIIFDDP_00311	7.55e-258	pbpX1	-	-	V	-	-	-	Beta-lactamase
PHIIFDDP_00312	1.61e-129	pdxK	2.7.1.35	-	H	ko:K00868	ko00750,ko01100,map00750,map01100	ko00000,ko00001,ko01000	Phosphomethylpyrimidine kinase
PHIIFDDP_00313	7.89e-124	-	-	-	S	-	-	-	ECF-type riboflavin transporter, S component
PHIIFDDP_00314	4.6e-291	-	-	-	S	-	-	-	Putative peptidoglycan binding domain
PHIIFDDP_00315	4.04e-108	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
PHIIFDDP_00316	0.0	yqjE	3.4.11.14, 3.4.11.4	-	E	ko:K01258,ko:K01263	-	ko00000,ko01000,ko01002	Cleaves the N-terminal amino acid of tripeptides
PHIIFDDP_00317	3.95e-242	-	-	-	L	ko:K07478	-	ko00000	AAA C-terminal domain
PHIIFDDP_00318	1.12e-85	spxA	-	-	K	ko:K16509	-	ko00000	Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
PHIIFDDP_00319	7.84e-66	treB	-	-	G	ko:K02755,ko:K02756,ko:K02757	ko02060,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
PHIIFDDP_00320	1.88e-232	-	-	-	G	ko:K02027	-	ko00000,ko00002,ko02000	Bacterial extracellular solute-binding protein
PHIIFDDP_00321	1.43e-80	-	-	-	S	ko:K07006	-	ko00000	Pyridoxamine 5'-phosphate oxidase
PHIIFDDP_00322	1.03e-302	XK27_01810	-	-	S	-	-	-	Calcineurin-like phosphoesterase
PHIIFDDP_00324	0.0	-	-	-	S	-	-	-	SLAP domain
PHIIFDDP_00325	0.0	hsdR	3.1.21.3	-	L	ko:K01153	-	ko00000,ko01000,ko02048	DEAD/DEAH box helicase
PHIIFDDP_00326	0.0	hsdM	2.1.1.72	-	V	ko:K03427	-	ko00000,ko01000,ko02048	type I restriction-modification system
PHIIFDDP_00327	4.18e-123	-	3.1.21.3	-	V	ko:K01154	-	ko00000,ko01000,ko02048	Type I restriction modification DNA specificity domain
PHIIFDDP_00328	9.28e-47	-	-	-	O	-	-	-	Torsin
PHIIFDDP_00330	0.0	-	-	-	S	-	-	-	Protein of unknown function DUF262
PHIIFDDP_00333	4.01e-95	-	-	-	-	-	-	-	-
PHIIFDDP_00334	7.01e-94	-	-	-	S	ko:K07126	-	ko00000	Sel1-like repeats.
PHIIFDDP_00335	3.34e-101	-	-	-	S	-	-	-	HIRAN
PHIIFDDP_00336	4.35e-44	-	-	-	-	-	-	-	-
PHIIFDDP_00337	1.1e-234	-	-	-	-	-	-	-	-
PHIIFDDP_00338	8.9e-131	-	-	-	S	-	-	-	AAA domain
PHIIFDDP_00340	0.0	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
PHIIFDDP_00341	2.67e-69	-	-	-	-	-	-	-	-
PHIIFDDP_00342	0.0	fhs	6.3.4.3	-	F	ko:K01938	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Belongs to the formate--tetrahydrofolate ligase family
PHIIFDDP_00343	2.6e-101	lspA	3.4.23.36	-	MU	ko:K03101	ko03060,map03060	ko00000,ko00001,ko01000,ko01002	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
PHIIFDDP_00344	2.28e-221	rluD	5.4.99.23	-	J	ko:K06180	-	ko00000,ko01000,ko03009	Responsible for synthesis of pseudouridine from uracil
PHIIFDDP_00345	8.34e-255	carA	6.3.5.5	-	F	ko:K01956	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthetase glutamine chain
PHIIFDDP_00346	0.0	carB1	6.3.5.5	-	F	ko:K01955	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthase
PHIIFDDP_00347	0.0	FbpA	-	-	K	-	-	-	Fibronectin-binding protein
PHIIFDDP_00348	2.06e-88	-	-	-	-	-	-	-	-
PHIIFDDP_00349	1.15e-204	-	-	-	S	-	-	-	EDD domain protein, DegV family
PHIIFDDP_00350	0.0	mutS1	-	-	L	ko:K07456	ko03430,map03430	ko00000,ko00001,ko03400	Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
PHIIFDDP_00351	6.14e-259	xerS	-	-	L	ko:K03733	-	ko00000,ko03036	Belongs to the 'phage' integrase family
PHIIFDDP_00352	1.23e-89	-	-	-	-	-	-	-	-
PHIIFDDP_00353	1.25e-141	XK27_00160	-	-	S	-	-	-	Domain of unknown function (DUF5052)
PHIIFDDP_00354	1e-270	-	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
PHIIFDDP_00355	7.55e-53	-	-	-	S	-	-	-	Transglycosylase associated protein
PHIIFDDP_00357	3.24e-06	-	-	-	L	-	-	-	Transposase
PHIIFDDP_00358	1.38e-107	-	-	-	J	-	-	-	FR47-like protein
PHIIFDDP_00359	3.37e-50	-	-	-	S	-	-	-	Cytochrome B5
PHIIFDDP_00360	2.76e-215	arbZ	-	-	I	-	-	-	Phosphate acyltransferases
PHIIFDDP_00361	2.23e-234	-	-	-	M	-	-	-	Glycosyl transferase family 8
PHIIFDDP_00362	3.31e-237	-	-	-	M	-	-	-	Glycosyl transferase family 8
PHIIFDDP_00363	3.58e-201	arbx	-	-	M	-	-	-	Glycosyl transferase family 8
PHIIFDDP_00364	3.58e-193	-	-	-	I	-	-	-	Acyl-transferase
PHIIFDDP_00366	1.09e-46	-	-	-	-	-	-	-	-
PHIIFDDP_00368	3.98e-169	yycF	-	-	K	ko:K07668	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	response regulator
PHIIFDDP_00369	0.0	vicK	2.7.13.3	-	T	ko:K07652	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
PHIIFDDP_00370	0.0	yycH	-	-	S	-	-	-	YycH protein
PHIIFDDP_00371	7.44e-192	yycI	-	-	S	-	-	-	YycH protein
PHIIFDDP_00372	2.92e-189	vicX	3.1.26.11	-	S	ko:K00784	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	domain protein
PHIIFDDP_00373	2.87e-227	htrA	3.4.21.107	-	O	ko:K04771	ko01503,ko02020,map01503,map02020	ko00000,ko00001,ko00002,ko01000,ko01002,ko03110	serine protease
PHIIFDDP_00374	8.64e-107	rlmH	2.1.1.177	-	J	ko:K00783	-	ko00000,ko01000,ko03009	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
PHIIFDDP_00375	1.22e-38	-	-	-	G	-	-	-	Peptidase_C39 like family
PHIIFDDP_00376	7.56e-208	-	-	-	M	-	-	-	NlpC/P60 family
PHIIFDDP_00377	8.19e-116	-	-	-	G	-	-	-	Peptidase_C39 like family
PHIIFDDP_00378	6.58e-225	pepI	3.4.11.5	-	E	ko:K01259	ko00330,map00330	ko00000,ko00001,ko01000,ko01002	Releases the N-terminal proline from various substrates
PHIIFDDP_00379	2.28e-112	-	-	-	P	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Cobalt transport protein
PHIIFDDP_00380	0.0	-	-	-	S	ko:K16786,ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
PHIIFDDP_00381	1.05e-222	-	-	-	K	-	-	-	helix_turn_helix, arabinose operon control protein
PHIIFDDP_00382	1.41e-208	htpX	-	-	O	ko:K03799	-	ko00000,ko00002,ko01000,ko01002	Belongs to the peptidase M48B family
PHIIFDDP_00383	1.73e-126	lemA	-	-	S	ko:K03744	-	ko00000	LemA family
PHIIFDDP_00384	7.89e-248	ysdE	-	-	P	-	-	-	Citrate transporter
PHIIFDDP_00385	6.75e-92	-	-	-	S	-	-	-	Iron-sulphur cluster biosynthesis
PHIIFDDP_00386	0.0	glpQ	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	Membrane domain of glycerophosphoryl diester phosphodiesterase
PHIIFDDP_00387	9.69e-25	-	-	-	-	-	-	-	-
PHIIFDDP_00388	6.1e-166	-	-	-	-	-	-	-	-
PHIIFDDP_00389	2.77e-10	-	-	-	-	-	-	-	-
PHIIFDDP_00390	3.29e-274	-	-	-	M	-	-	-	Glycosyl transferase
PHIIFDDP_00391	1.28e-225	-	-	-	G	-	-	-	Glycosyl hydrolases family 8
PHIIFDDP_00392	2e-157	yfbR	-	-	S	ko:K07023	-	ko00000	HD containing hydrolase-like enzyme
PHIIFDDP_00393	1.34e-201	-	-	-	L	-	-	-	HNH nucleases
PHIIFDDP_00394	3.92e-185	yhaH	-	-	S	-	-	-	Protein of unknown function (DUF805)
PHIIFDDP_00395	4.8e-172	glnQ	-	-	E	ko:K17076	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
PHIIFDDP_00396	0.0	XK27_05795	-	-	P	ko:K17073,ko:K17074	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
PHIIFDDP_00397	1.41e-155	yxlJ	3.2.2.21	-	L	ko:K03652	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Belongs to the DNA glycosylase MPG family
PHIIFDDP_00398	3.78e-85	yeaO	-	-	S	-	-	-	Protein of unknown function, DUF488
PHIIFDDP_00399	5.93e-167	terC	-	-	P	-	-	-	Integral membrane protein TerC family
PHIIFDDP_00400	2.16e-120	adaB	2.1.1.63	-	L	ko:K00567,ko:K10778,ko:K13531	-	ko00000,ko01000,ko03000,ko03400	6-O-methylguanine DNA methyltransferase, DNA binding domain
PHIIFDDP_00401	3.56e-169	cobB	-	-	K	ko:K12410	-	ko00000,ko01000	SIR2 family
PHIIFDDP_00402	1.61e-112	-	-	-	-	-	-	-	-
PHIIFDDP_00403	0.0	cls	-	-	I	ko:K06131	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PHIIFDDP_00404	1.51e-233	-	-	-	S	-	-	-	Alpha/beta hydrolase of unknown function (DUF915)
PHIIFDDP_00405	2.41e-188	rnhA	3.1.26.4	-	L	ko:K03469	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PHIIFDDP_00406	9.18e-187	-	-	-	S	-	-	-	Protein of unknown function (DUF1002)
PHIIFDDP_00407	7.52e-199	epsV	-	-	S	-	-	-	glycosyl transferase family 2
PHIIFDDP_00408	3.19e-165	-	-	-	S	-	-	-	Alpha/beta hydrolase family
PHIIFDDP_00409	5.71e-101	-	-	-	K	-	-	-	Helix-turn-helix domain
PHIIFDDP_00411	6.09e-276	-	-	-	EGP	-	-	-	Major Facilitator Superfamily
PHIIFDDP_00412	1.83e-179	noxC	1.5.1.39	-	C	ko:K19286	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	coenzyme F420-1:gamma-L-glutamate ligase activity
PHIIFDDP_00413	8.73e-234	prs2	2.7.6.1	-	F	ko:K00948	ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PHIIFDDP_00414	8.37e-161	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PHIIFDDP_00415	1.11e-177	-	-	-	-	-	-	-	-
PHIIFDDP_00416	0.0	glnPH2	-	-	P	ko:K02029,ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter permease
PHIIFDDP_00417	4.12e-170	glnQ	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
PHIIFDDP_00418	1.22e-289	-	-	-	S	-	-	-	Cysteine-rich secretory protein family
PHIIFDDP_00419	3.39e-254	ddl	6.3.2.4	-	F	ko:K01921	ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Belongs to the D-alanine--D-alanine ligase family
PHIIFDDP_00420	4.93e-164	-	-	-	-	-	-	-	-
PHIIFDDP_00421	2.4e-258	yibE	-	-	S	-	-	-	overlaps another CDS with the same product name
PHIIFDDP_00422	7.8e-167	yibF	-	-	S	-	-	-	overlaps another CDS with the same product name
PHIIFDDP_00423	7.26e-205	-	-	-	I	-	-	-	alpha/beta hydrolase fold
PHIIFDDP_00424	0.0	-	-	-	G	-	-	-	Belongs to the glycosyl hydrolase 31 family
PHIIFDDP_00425	7.56e-278	nagA	3.5.1.25	-	G	ko:K01443	ko00520,ko01130,map00520,map01130	ko00000,ko00001,ko01000	Belongs to the metallo-dependent hydrolases superfamily. NagA family
PHIIFDDP_00426	0.0	-	-	-	S	ko:K06921	-	ko00000	Archaea bacterial proteins of unknown function
PHIIFDDP_00428	2.87e-31	-	-	-	S	ko:K07171	-	ko00000,ko01000,ko02048	PemK-like, MazF-like toxin of type II toxin-antitoxin system
PHIIFDDP_00429	1.97e-116	ntd	2.4.2.6	-	F	ko:K08728	ko00240,map00240	ko00000,ko00001,ko01000	Nucleoside
PHIIFDDP_00430	6.51e-114	-	2.7.1.200, 2.7.1.204	-	G	ko:K02773,ko:K20112	ko00052,ko01100,ko02060,map00052,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PHIIFDDP_00431	1.45e-190	-	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Tyrosine phosphatase family
PHIIFDDP_00432	9.29e-111	usp5	-	-	T	-	-	-	universal stress protein
PHIIFDDP_00433	2.58e-203	phnD	-	-	P	ko:K02044	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Phosphonate ABC transporter
PHIIFDDP_00434	1.67e-175	phnC	3.6.3.28	-	P	ko:K02041	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
PHIIFDDP_00435	5.6e-162	phnB	-	-	P	ko:K02042	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PHIIFDDP_00436	7.44e-190	-	-	-	P	ko:K02042	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PHIIFDDP_00437	2.78e-138	tag	3.2.2.20	-	L	ko:K01246	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	glycosylase
PHIIFDDP_00438	3e-108	-	-	-	-	-	-	-	-
PHIIFDDP_00439	0.0	-	-	-	S	-	-	-	Calcineurin-like phosphoesterase
PHIIFDDP_00440	0.0	asnB	6.3.5.4	-	E	ko:K01953	ko00250,ko01100,ko01110,map00250,map01100,map01110	ko00000,ko00001,ko01000,ko01002	Asparagine synthase
PHIIFDDP_00441	0.0	yxbA	6.3.1.12	-	S	ko:K17810	-	ko00000,ko01000	ATP-grasp enzyme
PHIIFDDP_00442	0.0	nrdD	1.1.98.6	-	F	ko:K21636	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Ribonucleoside-triphosphate reductase
PHIIFDDP_00443	1.91e-180	nrdG	1.97.1.4	-	O	ko:K04068	-	ko00000,ko01000	Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PHIIFDDP_00444	2.55e-131	yitW	-	-	S	-	-	-	Iron-sulfur cluster assembly protein
PHIIFDDP_00445	4.42e-292	XK27_04775	-	-	S	ko:K09155	-	ko00000	PAS domain
PHIIFDDP_00446	1.98e-278	yqjV	-	-	EGP	-	-	-	Major Facilitator Superfamily
PHIIFDDP_00447	0.0	pepO	-	-	O	ko:K07386	-	ko00000,ko01000,ko01002	Peptidase family M13
PHIIFDDP_00448	0.0	kup	-	-	P	ko:K03549	-	ko00000,ko02000	Transport of potassium into the cell
PHIIFDDP_00449	2.29e-97	-	-	-	-	-	-	-	-
PHIIFDDP_00450	3.75e-48	-	-	-	S	-	-	-	PFAM Archaeal ATPase
PHIIFDDP_00452	1.25e-13	-	-	-	-	-	-	-	-
PHIIFDDP_00453	4.07e-39	-	-	-	-	-	-	-	-
PHIIFDDP_00454	1.43e-54	-	-	-	S	-	-	-	Protein of unknown function (DUF2922)
PHIIFDDP_00455	9.58e-132	-	-	-	S	-	-	-	SLAP domain
PHIIFDDP_00456	2.47e-250	-	3.6.4.12	-	K	ko:K03655	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Putative ATP-dependent DNA helicase recG C-terminal
PHIIFDDP_00457	4.33e-95	-	-	-	-	-	-	-	-
PHIIFDDP_00459	9.28e-113	-	-	-	K	-	-	-	DNA-templated transcription, initiation
PHIIFDDP_00461	8.64e-198	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
PHIIFDDP_00462	9.99e-177	-	-	-	S	-	-	-	SLAP domain
PHIIFDDP_00463	2.77e-129	cadD	-	-	P	-	-	-	Cadmium resistance transporter
PHIIFDDP_00464	2.66e-57	-	-	-	L	-	-	-	transposase activity
PHIIFDDP_00465	2.66e-289	-	-	-	NU	-	-	-	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
PHIIFDDP_00466	5.87e-254	-	3.2.1.96, 3.5.1.28	GH73	M	ko:K01227,ko:K01447,ko:K13714,ko:K13731	ko00511,ko05100,map00511,map05100	ko00000,ko00001,ko01000	N-acetylmuramoyl-L-alanine amidase
PHIIFDDP_00467	0.0	yjbQ	-	-	P	ko:K03455,ko:K03499	-	ko00000,ko02000	TrkA C-terminal domain protein
PHIIFDDP_00468	8.71e-148	pcp	3.4.19.3	-	O	ko:K01304	-	ko00000,ko01000,ko01002	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
PHIIFDDP_00469	1.56e-228	-	-	-	S	-	-	-	Oxidoreductase family, NAD-binding Rossmann fold
PHIIFDDP_00470	8.33e-186	-	-	-	-	-	-	-	-
PHIIFDDP_00471	7.63e-169	-	-	-	-	-	-	-	-
PHIIFDDP_00472	4.51e-171	gpmA	5.4.2.11	-	G	ko:K01834	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PHIIFDDP_00473	3e-127	-	-	-	G	-	-	-	Aldose 1-epimerase
PHIIFDDP_00474	1.69e-257	brpA	-	-	K	-	-	-	Cell envelope-like function transcriptional attenuator common domain protein
PHIIFDDP_00475	1.78e-146	plsY1	2.3.1.15	-	I	ko:K08591	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
PHIIFDDP_00476	0.0	XK27_08315	-	-	M	-	-	-	Sulfatase
PHIIFDDP_00477	1.27e-309	tyrS	6.1.1.1	-	J	ko:K01866	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
PHIIFDDP_00478	1.97e-72	-	-	-	-	-	-	-	-
PHIIFDDP_00483	1.94e-52	-	-	-	-	-	-	-	-
PHIIFDDP_00484	1.86e-146	-	-	-	D	-	-	-	COG1674 DNA segregation ATPase FtsK SpoIIIE and related proteins
PHIIFDDP_00488	1.6e-136	-	-	-	EP	-	-	-	Plasmid replication protein
PHIIFDDP_00490	3.45e-30	-	-	-	-	-	-	-	-
PHIIFDDP_00491	7.66e-204	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
PHIIFDDP_00492	0.0	pepC2	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	aminopeptidase
PHIIFDDP_00493	2.62e-159	ypgQ	-	-	S	ko:K06950	-	ko00000	Metal dependent phosphohydrolases with conserved 'HD' motif.
PHIIFDDP_00494	0.0	oppA	-	-	E	ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
PHIIFDDP_00495	0.0	oppA	-	-	E	ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
PHIIFDDP_00496	4.39e-267	guaB	1.1.1.205	-	F	ko:K00088	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
PHIIFDDP_00497	1.34e-191	oppB	-	-	P	ko:K15581	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC-type dipeptide oligopeptide nickel transport systems, permease components
PHIIFDDP_00498	6.71e-241	oppC	-	-	EP	ko:K15582	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC-type dipeptide oligopeptide nickel transport systems, permease components
PHIIFDDP_00499	5.83e-251	oppD	-	-	P	ko:K02031,ko:K15583	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
PHIIFDDP_00500	6.54e-222	oppF	-	-	P	ko:K10823	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
PHIIFDDP_00501	0.0	pepE	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	aminopeptidase
PHIIFDDP_00502	3.4e-93	hsp	-	-	O	ko:K13993	ko04141,map04141	ko00000,ko00001,ko03110	Belongs to the small heat shock protein (HSP20) family
PHIIFDDP_00503	5.69e-100	greA	-	-	K	ko:K03624	-	ko00000,ko03021	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PHIIFDDP_00504	1.43e-144	-	-	-	-	-	-	-	-
PHIIFDDP_00506	7.04e-145	-	-	-	E	-	-	-	Belongs to the SOS response-associated peptidase family
PHIIFDDP_00507	4.07e-245	trpS	6.1.1.2	-	J	ko:K01867	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-I aminoacyl-tRNA synthetase family
PHIIFDDP_00508	4.29e-116	comEB	3.5.4.12	-	F	ko:K01493	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko02044	MafB19-like deaminase
PHIIFDDP_00509	3.22e-135	-	-	-	S	ko:K06872	-	ko00000	TPM domain
PHIIFDDP_00510	0.0	mgtA	3.6.3.2	-	P	ko:K01531	-	ko00000,ko01000	COG0474 Cation transport ATPase
PHIIFDDP_00512	1.79e-146	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
PHIIFDDP_00514	9.24e-199	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
PHIIFDDP_00515	0.0	metG	6.1.1.10	-	J	ko:K01874	ko00450,ko00970,map00450,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
PHIIFDDP_00516	6.4e-188	tatD	-	-	L	ko:K03424	-	ko00000,ko01000	hydrolase, TatD family
PHIIFDDP_00517	5.17e-129	rnmV	3.1.26.8	-	J	ko:K05985	-	ko00000,ko01000	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
PHIIFDDP_00518	9.09e-203	ksgA	2.1.1.182	-	J	ko:K02528	-	ko00000,ko01000,ko03009	Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
PHIIFDDP_00519	1.72e-53	veg	-	-	S	-	-	-	Biofilm formation stimulator VEG
PHIIFDDP_00520	5.03e-191	purR	-	-	F	ko:K09685	-	ko00000,ko03000	pur operon repressor
PHIIFDDP_00521	7.68e-309	glmU	2.3.1.157, 2.7.7.23	-	M	ko:K04042	ko00520,ko01100,ko01130,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
PHIIFDDP_00522	1.06e-110	-	-	-	-	-	-	-	-
PHIIFDDP_00523	0.0	-	-	-	S	-	-	-	SLAP domain
PHIIFDDP_00524	8.95e-225	prs	2.7.6.1	-	F	ko:K00948	ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PHIIFDDP_00525	1.37e-219	-	-	-	GK	-	-	-	ROK family
PHIIFDDP_00526	7.24e-58	-	-	-	-	-	-	-	-
PHIIFDDP_00527	0.0	-	-	-	S	ko:K06885	-	ko00000	Metal dependent phosphohydrolases with conserved 'HD' motif.
PHIIFDDP_00528	7.59e-89	-	-	-	S	-	-	-	Domain of unknown function (DUF1934)
PHIIFDDP_00529	4.63e-92	rpoE	-	-	K	ko:K03048	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko03021,ko03400	Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
PHIIFDDP_00530	0.0	pyrG	6.3.4.2	-	F	ko:K01937	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
PHIIFDDP_00531	1.89e-312	murA	2.5.1.7	-	M	ko:K00790	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PHIIFDDP_00532	1.79e-97	-	-	-	K	-	-	-	acetyltransferase
PHIIFDDP_00533	0.0	pepDA	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
PHIIFDDP_00534	3.06e-198	msmR	-	-	K	-	-	-	AraC-like ligand binding domain
PHIIFDDP_00535	1.04e-287	pbuX	-	-	F	ko:K03458,ko:K16169	-	ko00000,ko02000	xanthine permease
PHIIFDDP_00536	2.76e-135	xpt	2.4.2.22	-	F	ko:K03816	ko00230,ko01100,ko01110,map00230,map01100,map01110	ko00000,ko00001,ko01000	Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
PHIIFDDP_00537	4.41e-11	-	-	-	K	-	-	-	Helix-turn-helix
PHIIFDDP_00538	0.0	guaA	6.3.5.2	-	F	ko:K01951	ko00230,ko00983,ko01100,map00230,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko01002	Catalyzes the synthesis of GMP from XMP
PHIIFDDP_00541	6.59e-160	-	-	-	S	-	-	-	Protein of unknown function (DUF1275)
PHIIFDDP_00542	5.03e-76	-	-	-	K	-	-	-	Helix-turn-helix domain
PHIIFDDP_00543	2.45e-146	ppiB	5.2.1.8	-	G	ko:K03768	-	ko00000,ko01000,ko03110	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
PHIIFDDP_00544	5.18e-222	ppaC	3.6.1.1	-	C	ko:K15986	ko00190,map00190	ko00000,ko00001,ko01000	inorganic pyrophosphatase
PHIIFDDP_00545	6.13e-232	-	-	-	K	-	-	-	Transcriptional regulator
PHIIFDDP_00546	0.0	parC	-	-	L	ko:K02621	-	ko00000,ko01000,ko02048,ko03032,ko03036	Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PHIIFDDP_00547	0.0	parE	-	-	L	ko:K02622	-	ko00000,ko01000,ko02048,ko03032,ko03036	Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PHIIFDDP_00548	9.39e-141	plsY	2.3.1.15	-	I	ko:K08591	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
PHIIFDDP_00549	0.0	snf	-	-	KL	-	-	-	domain protein
PHIIFDDP_00550	2.05e-20	-	-	-	-	-	-	-	-
PHIIFDDP_00551	1.49e-50	-	-	-	-	-	-	-	-
PHIIFDDP_00552	1.19e-136	pncA	-	-	Q	-	-	-	Isochorismatase family
PHIIFDDP_00553	5.05e-158	-	-	-	-	-	-	-	-
PHIIFDDP_00556	4.13e-83	-	-	-	-	-	-	-	-
PHIIFDDP_00557	3.56e-47	-	-	-	-	-	-	-	-
PHIIFDDP_00558	4.71e-148	-	3.6.1.66	-	F	ko:K02428	ko00230,map00230	ko00000,ko00001,ko01000	Ham1 family
PHIIFDDP_00559	1.95e-103	-	-	-	-	-	-	-	-
PHIIFDDP_00560	7.87e-308	cpdA	-	-	S	-	-	-	Calcineurin-like phosphoesterase
PHIIFDDP_00561	2.05e-278	ypsC	-	-	L	ko:K07444	-	ko00000,ko01000	Belongs to the methyltransferase superfamily
PHIIFDDP_00562	1.85e-90	gpsB	-	-	D	-	-	-	Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
PHIIFDDP_00563	1.18e-139	ypsA	-	-	S	-	-	-	Belongs to the UPF0398 family
PHIIFDDP_00564	3.45e-151	recU	-	-	L	ko:K03700	-	ko00000,ko03400	Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
PHIIFDDP_00565	0.0	ponA	2.4.1.129, 3.4.16.4	GT51	M	ko:K05366	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01003,ko01011	penicillin-binding protein 1A
PHIIFDDP_00566	1.92e-148	nth	4.2.99.18	-	L	ko:K10773	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
PHIIFDDP_00567	1.98e-148	dnaD	-	-	L	ko:K02086	-	ko00000	DnaD domain protein
PHIIFDDP_00568	0.0	asnS	6.1.1.22	-	J	ko:K01893	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Asparaginyl-tRNA synthetase
PHIIFDDP_00569	2.36e-116	ypmB	-	-	S	-	-	-	Protein conserved in bacteria
PHIIFDDP_00570	0.0	dinG	3.6.4.12	-	L	ko:K03722	-	ko00000,ko01000,ko03400	helicase involved in DNA repair and perhaps also replication
PHIIFDDP_00571	0.0	addA	3.6.4.12	-	L	ko:K16898	-	ko00000,ko01000,ko03400	ATP-dependent helicase nuclease subunit A
PHIIFDDP_00572	0.0	rexB	3.6.4.12	-	L	ko:K16899	-	ko00000,ko01000,ko03400	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
PHIIFDDP_00573	2.59e-174	mvk	2.7.1.36	-	I	ko:K00869	ko00900,ko01100,ko01110,ko01130,ko04146,map00900,map01100,map01110,map01130,map04146	ko00000,ko00001,ko00002,ko01000	GHMP kinases N terminal domain
PHIIFDDP_00574	5.87e-228	mvaD	4.1.1.33	-	I	ko:K01597	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	diphosphomevalonate decarboxylase
PHIIFDDP_00575	2.71e-260	mvaK2	2.7.4.2	-	I	ko:K00938	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	phosphomevalonate kinase
PHIIFDDP_00576	4.17e-237	fni	5.3.3.2	-	C	ko:K01823	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
PHIIFDDP_00577	1.28e-150	-	3.1.3.102, 3.1.3.104, 3.1.3.23	-	G	ko:K07757,ko:K20861	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Sucrose-6F-phosphate phosphohydrolase
PHIIFDDP_00578	0.0	rsmF	-	-	J	-	-	-	NOL1 NOP2 sun family protein
PHIIFDDP_00579	5.99e-213	-	-	-	-	-	-	-	-
PHIIFDDP_00580	5.93e-186	-	-	-	-	-	-	-	-
PHIIFDDP_00581	1.27e-133	lepB	3.4.21.89	-	U	ko:K03100	ko02024,ko03060,map02024,map03060	ko00000,ko00001,ko01000,ko01002	Belongs to the peptidase S26 family
PHIIFDDP_00582	4.24e-37	-	-	-	-	-	-	-	-
PHIIFDDP_00583	1.98e-52	ybjQ	-	-	S	-	-	-	Belongs to the UPF0145 family
PHIIFDDP_00584	1.66e-151	-	-	-	-	-	-	-	-
PHIIFDDP_00585	4.23e-133	-	-	-	-	-	-	-	-
PHIIFDDP_00586	9.56e-180	-	-	-	-	-	-	-	-
PHIIFDDP_00587	3.8e-161	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
PHIIFDDP_00588	1.25e-80	lexA	-	-	K	ko:K07979	-	ko00000,ko03000	Transcriptional regulator, GntR family
PHIIFDDP_00589	2.35e-306	pepT	3.4.11.4	-	E	ko:K01258	-	ko00000,ko01000,ko01002	Cleaves the N-terminal amino acid of tripeptides
PHIIFDDP_00590	6.95e-197	yqfO	-	-	S	-	-	-	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
PHIIFDDP_00591	1.39e-159	trmK	2.1.1.217	-	S	ko:K06967	-	ko00000,ko01000,ko03016	SAM-dependent methyltransferase
PHIIFDDP_00592	5.37e-106	-	3.6.1.55	-	F	ko:K03574	-	ko00000,ko01000,ko03400	NUDIX domain
PHIIFDDP_00593	1.77e-165	-	-	-	S	-	-	-	Peptidase family M23
PHIIFDDP_00594	9e-255	sigA	-	-	K	ko:K03086	-	ko00000,ko03021	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
PHIIFDDP_00595	0.0	dnaG	-	-	L	ko:K02316	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
PHIIFDDP_00596	0.0	glyS	6.1.1.14	-	J	ko:K01879	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Glycyl-tRNA synthetase beta subunit
PHIIFDDP_00597	9.03e-229	glyQ	6.1.1.14	-	J	ko:K01878	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	glycyl-tRNA synthetase alpha subunit
PHIIFDDP_00598	2.48e-174	recO	-	-	L	ko:K03584	ko03440,map03440	ko00000,ko00001,ko03400	Involved in DNA repair and RecF pathway recombination
PHIIFDDP_00599	3.22e-215	era	-	-	S	ko:K03595	-	ko00000,ko03009,ko03029	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
PHIIFDDP_00600	3.58e-129	ybeY	-	-	S	ko:K07042	-	ko00000,ko03009	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
PHIIFDDP_00601	1.74e-224	phoH	-	-	T	ko:K06217	-	ko00000	phosphate starvation-inducible protein PhoH
PHIIFDDP_00602	3.75e-93	yqeY	-	-	S	ko:K09117	-	ko00000	YqeY-like protein
PHIIFDDP_00603	4.83e-30	rpsU	-	-	J	ko:K02970	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bS21 family
PHIIFDDP_00604	6.94e-199	yqfL	2.7.11.33, 2.7.4.28	-	F	ko:K09773	-	ko00000,ko01000	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
PHIIFDDP_00605	9.23e-214	cas2	-	-	L	ko:K09951	-	ko00000,ko02048	CRISPR-associated protein (Cas_Cas2CT1978)
PHIIFDDP_00606	1.17e-220	cas1	-	-	L	ko:K15342	-	ko00000,ko02048,ko03400	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
PHIIFDDP_00607	5.71e-159	casE	-	-	S	ko:K19126	-	ko00000,ko02048	CRISPR_assoc
PHIIFDDP_00608	6.1e-170	casD	-	-	S	ko:K19125	-	ko00000,ko02048	CRISPR-associated protein (Cas_Cas5)
PHIIFDDP_00609	2.78e-253	casC	-	-	L	ko:K19124	-	ko00000,ko02048	CT1975-like protein
PHIIFDDP_00610	1.85e-142	-	-	-	S	ko:K19046	-	ko00000,ko02048	CRISPR-associated protein Cse2 (CRISPR_cse2)
PHIIFDDP_00611	0.0	casA	-	-	L	ko:K19123	-	ko00000,ko02048	the current gene model (or a revised gene model) may contain a frame shift
PHIIFDDP_00612	0.0	cas3	-	-	L	ko:K07012	-	ko00000,ko01000,ko02048	CRISPR-associated helicase cas3
PHIIFDDP_00613	8.53e-63	-	-	-	-	-	-	-	-
PHIIFDDP_00615	2.61e-147	fnr	-	-	K	ko:K21562	-	ko00000,ko03000	Transcriptional regulator, Crp Fnr family
PHIIFDDP_00616	3.26e-124	dpsB	-	-	P	-	-	-	Belongs to the Dps family
PHIIFDDP_00617	5.51e-46	-	-	-	C	-	-	-	Heavy-metal-associated domain
PHIIFDDP_00618	0.0	cadA	3.6.3.3, 3.6.3.5	-	P	ko:K01534	-	ko00000,ko01000	E1-E2 ATPase
PHIIFDDP_00619	1.33e-134	-	-	-	-	-	-	-	-
PHIIFDDP_00620	1.71e-150	-	-	-	S	-	-	-	Peptidase family M23
PHIIFDDP_00621	5.19e-138	msrA	1.8.4.11, 1.8.4.12	-	O	ko:K07304,ko:K12267	-	ko00000,ko01000	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PHIIFDDP_00623	8.89e-98	-	-	-	-	-	-	-	-
PHIIFDDP_00624	2.33e-204	yitT	-	-	S	-	-	-	Uncharacterised 5xTM membrane BCR, YitT family COG1284
PHIIFDDP_00625	2.6e-149	-	-	-	-	-	-	-	-
PHIIFDDP_00626	1.3e-203	thrB	2.7.1.39	-	F	ko:K00872	ko00260,ko01100,ko01110,ko01120,ko01230,map00260,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
PHIIFDDP_00627	2.95e-283	hom	1.1.1.3	-	E	ko:K00003	ko00260,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00270,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	homoserine dehydrogenase
PHIIFDDP_00628	0.0	thrC	4.2.3.1	-	E	ko:K01733	ko00260,ko00750,ko01100,ko01110,ko01120,ko01230,map00260,map00750,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Threonine synthase
PHIIFDDP_00629	0.0	lysC	2.7.2.4	-	E	ko:K00928	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the aspartokinase family
PHIIFDDP_00630	1.18e-133	yrgI	5.4.2.11	-	G	ko:K01834	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Histidine phosphatase superfamily (branch 1)
PHIIFDDP_00631	0.0	-	-	-	L	-	-	-	PLD-like domain
PHIIFDDP_00632	3.29e-52	-	-	-	S	-	-	-	SnoaL-like domain
PHIIFDDP_00633	9.27e-93	-	-	-	K	-	-	-	sequence-specific DNA binding
PHIIFDDP_00634	3.52e-30	-	-	-	G	-	-	-	Ribose/Galactose Isomerase
PHIIFDDP_00635	4.55e-93	-	-	-	-	-	-	-	-
PHIIFDDP_00636	0.0	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
PHIIFDDP_00637	0.0	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
PHIIFDDP_00638	9.22e-159	-	-	-	-	-	-	-	-
PHIIFDDP_00639	1.69e-152	-	-	-	G	-	-	-	Antibiotic biosynthesis monooxygenase
PHIIFDDP_00640	1.54e-124	-	-	-	-	-	-	-	-
PHIIFDDP_00641	5.94e-141	-	-	-	K	-	-	-	LysR substrate binding domain
PHIIFDDP_00642	4.04e-29	-	-	-	-	-	-	-	-
PHIIFDDP_00643	3.08e-287	-	-	-	S	-	-	-	Sterol carrier protein domain
PHIIFDDP_00644	5.46e-126	citX	2.7.7.61	-	HI	ko:K05964	ko02020,map02020	ko00000,ko00001,ko01000	Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase
PHIIFDDP_00645	9.99e-118	arcC	2.7.2.2	-	E	ko:K00926	ko00220,ko00230,ko00910,ko01100,ko01120,ko01200,map00220,map00230,map00910,map01100,map01120,map01200	ko00000,ko00001,ko01000	Belongs to the carbamate kinase family
PHIIFDDP_00646	1.23e-59	argF	2.1.3.3	-	E	ko:K00611	ko00220,ko01100,ko01110,ko01130,ko01230,map00220,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
PHIIFDDP_00647	3.08e-83	argF	2.1.3.3	-	E	ko:K00611	ko00220,ko01100,ko01110,ko01130,ko01230,map00220,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
PHIIFDDP_00648	1.11e-302	arcA	3.5.3.6	-	E	ko:K01478	ko00220,ko01100,ko01110,ko01130,map00220,map01100,map01110,map01130	ko00000,ko00001,ko01000	Arginine
PHIIFDDP_00649	1.5e-177	lysR5	-	-	K	-	-	-	LysR substrate binding domain
PHIIFDDP_00650	0.0	-	-	-	P	-	-	-	Cation transporter/ATPase, N-terminus
PHIIFDDP_00651	1.21e-12	-	-	-	S	-	-	-	Metal binding domain of Ada
PHIIFDDP_00652	1.39e-06	-	-	-	S	-	-	-	Metal binding domain of Ada
PHIIFDDP_00653	3.03e-71	ybhL	-	-	S	ko:K06890	-	ko00000	Belongs to the BI1 family
PHIIFDDP_00654	1.85e-160	-	-	-	S	ko:K09963	-	ko00000	Bacterial protein of unknown function (DUF871)
PHIIFDDP_00655	7.74e-44	-	-	-	S	ko:K09963	-	ko00000	Bacterial protein of unknown function (DUF871)
PHIIFDDP_00656	3.92e-254	-	1.8.1.7	-	C	ko:K00383,ko:K21739	ko00480,ko04918,map00480,map04918	ko00000,ko00001,ko01000	Pyridine nucleotide-disulfide oxidoreductase
PHIIFDDP_00658	1.31e-57	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
PHIIFDDP_00659	2.32e-121	apt	2.4.2.7	-	F	ko:K00759	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000,ko04147	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
PHIIFDDP_00660	0.0	recJ	-	-	L	ko:K07462	ko03410,ko03430,ko03440,map03410,map03430,map03440	ko00000,ko00001,ko01000,ko03400	Single-stranded-DNA-specific exonuclease RecJ
PHIIFDDP_00661	2.21e-130	srtA	3.4.22.70	-	M	ko:K07284	-	ko00000,ko01000,ko01002,ko01011	sortase family
PHIIFDDP_00662	3.02e-26	-	-	-	-	-	-	-	-
PHIIFDDP_00664	8.31e-06	-	-	-	M	ko:K07273	-	ko00000	lysozyme activity
PHIIFDDP_00666	6.07e-12	-	-	-	-	-	-	-	-
PHIIFDDP_00667	3.06e-43	-	-	-	-	-	-	-	-
PHIIFDDP_00669	9.92e-138	-	-	-	S	-	-	-	Calcineurin-like phosphoesterase
PHIIFDDP_00670	1.23e-28	-	-	-	-	-	-	-	-
PHIIFDDP_00673	4.96e-186	-	-	-	L	-	-	-	Phage tail tape measure protein TP901
PHIIFDDP_00674	2.23e-50	-	-	-	S	-	-	-	Bacteriophage Gp15 protein
PHIIFDDP_00678	2.85e-28	-	-	-	S	-	-	-	Minor capsid protein
PHIIFDDP_00681	4.02e-130	-	-	-	S	-	-	-	T=7 icosahedral viral capsid
PHIIFDDP_00682	4.16e-22	-	-	-	S	-	-	-	Phage minor structural protein GP20
PHIIFDDP_00684	9.1e-148	-	-	-	S	-	-	-	Phage minor capsid protein 2
PHIIFDDP_00685	2.21e-173	-	-	-	S	-	-	-	Phage portal protein, SPP1 Gp6-like
PHIIFDDP_00686	1.76e-162	-	-	-	L	ko:K06909	-	ko00000	Phage terminase, large subunit
PHIIFDDP_00687	9.35e-47	-	-	-	L	ko:K07474	-	ko00000	Terminase small subunit
PHIIFDDP_00688	5.99e-23	-	-	-	-	-	-	-	-
PHIIFDDP_00697	2.02e-76	-	-	-	L	-	-	-	DnaD domain protein
PHIIFDDP_00698	7.77e-95	-	-	-	S	-	-	-	ERF superfamily
PHIIFDDP_00699	1.87e-103	-	-	-	S	-	-	-	Protein of unknown function (DUF1351)
PHIIFDDP_00702	5.55e-07	-	-	-	K	-	-	-	Tetratricopeptide repeat
PHIIFDDP_00707	3.63e-139	-	-	-	K	ko:K07741	-	ko00000	BRO family, N-terminal domain
PHIIFDDP_00709	2.03e-30	-	-	-	K	-	-	-	Cro/C1-type HTH DNA-binding domain
PHIIFDDP_00715	4.52e-50	-	-	-	-	-	-	-	-
PHIIFDDP_00717	2.57e-225	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
PHIIFDDP_00718	0.0	lepA	-	-	M	ko:K03596	ko05134,map05134	ko00000,ko00001	Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
PHIIFDDP_00719	5.64e-276	dnaJ	-	-	O	ko:K03686	-	ko00000,ko03029,ko03110	ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
PHIIFDDP_00720	0.0	dnaK	-	-	O	ko:K04043	ko03018,ko04212,ko05152,map03018,map04212,map05152	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	Heat shock 70 kDa protein
PHIIFDDP_00721	3.74e-109	grpE	-	-	O	ko:K03687	-	ko00000,ko03029,ko03110	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
PHIIFDDP_00722	2.56e-248	hrcA	-	-	K	ko:K03705	-	ko00000,ko03000	Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
PHIIFDDP_00723	2.65e-223	ribF	2.7.1.26, 2.7.7.2	-	H	ko:K11753	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Belongs to the ribF family
PHIIFDDP_00724	4.03e-199	truB	5.4.99.25	-	J	ko:K03177,ko:K03483	-	ko00000,ko01000,ko03000,ko03016	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
PHIIFDDP_00725	2.88e-80	rbfA	-	-	J	ko:K02834	-	ko00000,ko03009	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
PHIIFDDP_00726	0.0	infB	-	-	J	ko:K02519	-	ko00000,ko03012,ko03029	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
PHIIFDDP_00727	1.61e-64	ylxQ	-	-	J	-	-	-	ribosomal protein
PHIIFDDP_00728	3.75e-63	ylxR	-	-	K	ko:K07742	-	ko00000	Protein of unknown function (DUF448)
PHIIFDDP_00729	8.73e-262	nusA	-	-	K	ko:K02600	-	ko00000,ko03009,ko03021	Participates in both transcription termination and antitermination
PHIIFDDP_00730	3.4e-108	rimP	-	-	J	ko:K09748	-	ko00000,ko03009	Required for maturation of 30S ribosomal subunits
PHIIFDDP_00731	0.0	polC	2.7.7.7	-	L	ko:K03763	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PHIIFDDP_00732	0.0	proS	6.1.1.15	-	J	ko:K01881	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
PHIIFDDP_00733	1.5e-252	rseP	-	-	M	ko:K11749	ko02024,ko04112,map02024,map04112	ko00000,ko00001,ko01000,ko01002	zinc metalloprotease
PHIIFDDP_00734	2.88e-183	cdsA	2.7.7.41	-	I	ko:K00981	ko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070	ko00000,ko00001,ko00002,ko01000	Belongs to the CDS family
PHIIFDDP_00735	6.38e-178	uppS	2.5.1.31	-	H	ko:K00806	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
PHIIFDDP_00736	4.96e-121	frr	-	-	J	ko:K02838	-	ko00000,ko03012	Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
PHIIFDDP_00737	5.86e-168	pyrH	2.7.4.22	-	F	ko:K09903	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphorylation of UMP to UDP
PHIIFDDP_00738	4.33e-236	tsf	-	-	J	ko:K02357	-	ko00000,ko03012,ko03029	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
PHIIFDDP_00739	2.21e-180	rpsB	-	-	J	ko:K02967	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uS2 family
PHIIFDDP_00740	4.93e-243	yabB	2.1.1.223	-	L	ko:K07461,ko:K15460	-	ko00000,ko01000,ko03016	Methyltransferase small domain
PHIIFDDP_00741	2.08e-145	plsC	2.3.1.51	-	I	ko:K00655	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Acyltransferase
PHIIFDDP_00742	2.35e-288	cfa	2.1.1.79	-	M	ko:K00574	-	ko00000,ko01000	cyclopropane-fatty-acyl-phospholipid synthase
PHIIFDDP_00743	1.67e-117	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
PHIIFDDP_00745	5.53e-128	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
PHIIFDDP_00746	4.74e-182	-	-	-	S	-	-	-	SLAP domain
PHIIFDDP_00747	0.0	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
PHIIFDDP_00748	1.72e-110	dps	-	-	P	ko:K04047	-	ko00000,ko03036	Belongs to the Dps family
PHIIFDDP_00749	0.0	pepO	-	-	O	ko:K07386	-	ko00000,ko01000,ko01002	Peptidase family M13
PHIIFDDP_00750	0.0	mdlB	-	-	V	ko:K06147,ko:K18890	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
PHIIFDDP_00751	0.0	mdlA	-	-	V	ko:K06148,ko:K18889	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
PHIIFDDP_00752	1.3e-40	XK26_06720	-	-	S	ko:K09976	-	ko00000	Uncharacterised protein family (UPF0154)
PHIIFDDP_00753	4.16e-51	ynzC	-	-	S	-	-	-	UPF0291 protein
PHIIFDDP_00754	9.86e-146	lexA	3.4.21.88	-	K	ko:K01356	-	ko00000,ko00002,ko01000,ko01002,ko03400	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
PHIIFDDP_00755	7.18e-187	-	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase family
PHIIFDDP_00756	6.91e-156	ung2	3.2.2.27	-	L	ko:K21929	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Uracil-DNA glycosylase
PHIIFDDP_00757	5.4e-274	-	-	-	S	-	-	-	SLAP domain
PHIIFDDP_00758	1.64e-74	rplS	-	-	J	ko:K02884	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
PHIIFDDP_00759	2.81e-174	trmD	2.1.1.228	-	J	ko:K00554	-	ko00000,ko01000,ko03016	Belongs to the RNA methyltransferase TrmD family
PHIIFDDP_00760	2.08e-122	rimM	-	-	J	ko:K02860	-	ko00000,ko03009	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
PHIIFDDP_00761	6.78e-60	rpsP	-	-	J	ko:K02959	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Belongs to the bacterial ribosomal protein bS16 family
PHIIFDDP_00762	5.7e-291	ffh	3.6.5.4	-	U	ko:K03106	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko01000,ko02044	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
PHIIFDDP_00763	2.75e-72	ylxM	-	-	S	ko:K09787	-	ko00000	Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
PHIIFDDP_00764	0.0	ctrA	-	-	E	ko:K03294	-	ko00000	amino acid
PHIIFDDP_00765	0.0	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	FtsX-like permease family
PHIIFDDP_00766	1.89e-172	cysA	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PHIIFDDP_00767	0.0	pepD2	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
PHIIFDDP_00768	2.99e-229	ftsY	-	-	U	ko:K03110	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
PHIIFDDP_00769	0.0	smc	-	-	D	ko:K03529	-	ko00000,ko03036	Required for chromosome condensation and partitioning
PHIIFDDP_00770	2.8e-160	rnc	3.1.26.3	-	J	ko:K03685	ko03008,ko05205,map03008,map05205	ko00000,ko00001,ko01000,ko03009,ko03019,ko03036	Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
PHIIFDDP_00771	0.0	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
PHIIFDDP_00772	0.0	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
PHIIFDDP_00773	3.06e-181	oppC5	-	-	P	ko:K02034	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PHIIFDDP_00774	2.27e-220	oppB	-	-	P	ko:K02033,ko:K02034	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
PHIIFDDP_00775	2.57e-226	oppF	-	-	P	ko:K02032	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
PHIIFDDP_00776	1.21e-245	oppD	-	-	P	ko:K02031,ko:K15583	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
PHIIFDDP_00777	8.89e-47	acpP	-	-	IQ	ko:K02078	-	ko00000,ko00001	Carrier of the growing fatty acid chain in fatty acid biosynthesis
PHIIFDDP_00778	9.07e-234	plsX	2.3.1.15	-	I	ko:K03621	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
PHIIFDDP_00779	0.0	recG	3.6.4.12	-	L	ko:K03655	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
PHIIFDDP_00780	0.0	yloV	-	-	S	ko:K07030	-	ko00000	DAK2 domain fusion protein YloV
PHIIFDDP_00781	8.29e-75	yloU	-	-	S	-	-	-	Asp23 family, cell envelope-related function
PHIIFDDP_00782	1.33e-35	rpmB	-	-	J	ko:K02902	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL28 family
PHIIFDDP_00783	7.99e-42	-	-	-	-	-	-	-	-
PHIIFDDP_00784	4.49e-159	thiN	2.7.6.2	-	H	ko:K00949	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000	thiamine pyrophosphokinase
PHIIFDDP_00785	2.61e-154	rpe	5.1.3.1	-	G	ko:K01783	ko00030,ko00040,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the ribulose-phosphate 3-epimerase family
PHIIFDDP_00786	2.17e-211	rsgA	3.1.3.100	-	S	ko:K06949	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000,ko03009	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
PHIIFDDP_00787	0.0	prkC	2.7.11.1	-	KLT	ko:K08884,ko:K12132	-	ko00000,ko01000,ko01001	serine threonine protein kinase
PHIIFDDP_00788	5.67e-180	stp	3.1.3.16	-	T	ko:K20074	-	ko00000,ko01000,ko01009	phosphatase
PHIIFDDP_00789	9.39e-307	sun	2.1.1.176	-	J	ko:K03500	-	ko00000,ko01000,ko03009	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
PHIIFDDP_00790	4.41e-220	fmt	2.1.2.9	-	J	ko:K00604	ko00670,ko00970,map00670,map00970	ko00000,ko00001,ko01000	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
PHIIFDDP_00791	0.0	priA	-	-	L	ko:K04066	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
PHIIFDDP_00792	2.37e-46	rpoZ	2.7.7.6	-	K	ko:K03060	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
PHIIFDDP_00793	5.97e-145	gmk	2.7.4.8	-	F	ko:K00942	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko00002,ko01000	Essential for recycling GMP and indirectly, cGMP
PHIIFDDP_00794	2.19e-100	-	-	-	S	-	-	-	ASCH
PHIIFDDP_00795	0.0	recN	-	-	L	ko:K03631	-	ko00000,ko03400	May be involved in recombinational repair of damaged DNA
PHIIFDDP_00796	4.18e-196	rrmJ	2.1.1.226, 2.1.1.227	-	J	ko:K06442	-	ko00000,ko01000,ko03009	Ribosomal RNA large subunit methyltransferase J
PHIIFDDP_00797	4.72e-207	ispA	2.5.1.1, 2.5.1.10, 2.5.1.29	-	H	ko:K13789	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko01006	Belongs to the FPP GGPP synthase family
PHIIFDDP_00798	1.53e-47	xseB	3.1.11.6	-	L	ko:K03602	ko03430,map03430	ko00000,ko00001,ko01000,ko03400	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PHIIFDDP_00799	4.62e-247	xseA	3.1.11.6	-	L	ko:K03601	ko03430,map03430	ko00000,ko00001,ko01000,ko03400	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PHIIFDDP_00800	7.19e-199	folD	1.5.1.5, 3.5.4.9	-	F	ko:K01491	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
PHIIFDDP_00801	3.38e-86	nusB	-	-	K	ko:K03625	-	ko00000,ko03009,ko03021	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
PHIIFDDP_00802	7.98e-93	WQ51_04310	-	-	S	ko:K10947	-	ko00000,ko03000	Asp23 family, cell envelope-related function
PHIIFDDP_00803	2.11e-133	efp	-	-	J	ko:K02356	-	ko00000,ko03012	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
PHIIFDDP_00804	1.75e-256	pepP	3.4.11.9, 3.4.13.9	-	E	ko:K01262,ko:K01271	-	ko00000,ko01000,ko01002	Creatinase/Prolidase N-terminal domain
PHIIFDDP_00805	3.94e-64	rpmA	-	-	J	ko:K02899	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL27 family
PHIIFDDP_00806	6.82e-66	rplU	-	-	J	ko:K02888	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein binds to 23S rRNA in the presence of protein L20
PHIIFDDP_00807	1.23e-192	-	-	-	S	-	-	-	Uncharacterised 5xTM membrane BCR, YitT family COG1284
PHIIFDDP_00808	0.0	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2325)
PHIIFDDP_00811	2.07e-38	dmpI	5.3.2.6	-	G	ko:K01821	ko00362,ko00621,ko00622,ko01100,ko01120,ko01220,map00362,map00621,map00622,map01100,map01120,map01220	ko00000,ko00001,ko00002,ko01000	Belongs to the 4-oxalocrotonate tautomerase family
PHIIFDDP_00812	0.0	-	-	-	S	-	-	-	Predicted membrane protein (DUF2207)
PHIIFDDP_00813	6.57e-206	cinI	-	-	S	ko:K06889	-	ko00000	Serine hydrolase (FSH1)
PHIIFDDP_00814	9.98e-271	-	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
PHIIFDDP_00816	3.02e-228	lipA	-	-	I	-	-	-	Carboxylesterase family
PHIIFDDP_00817	1.82e-86	yusI	1.20.4.1	-	P	ko:K00537	-	ko00000,ko01000	Belongs to the ArsC family
PHIIFDDP_00818	0.0	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
PHIIFDDP_00819	0.0	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
PHIIFDDP_00820	4.33e-194	supH	-	-	S	-	-	-	haloacid dehalogenase-like hydrolase
PHIIFDDP_00821	4.33e-69	-	-	-	-	-	-	-	-
PHIIFDDP_00822	8.51e-50	-	-	-	-	-	-	-	-
PHIIFDDP_00823	2.22e-55	-	-	-	S	-	-	-	Alpha beta hydrolase
PHIIFDDP_00824	0.0	pepX	3.4.14.11	-	E	ko:K01281	-	ko00000,ko01000,ko01002	Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
PHIIFDDP_00825	2.88e-105	msrB	1.8.4.12	-	O	ko:K07305	-	ko00000,ko01000	peptide methionine sulfoxide reductase
PHIIFDDP_00826	2.6e-63	-	-	-	-	-	-	-	-
PHIIFDDP_00827	2.89e-191	-	-	-	U	ko:K05340	-	ko00000,ko02000	sugar transport
PHIIFDDP_00828	0.0	lctP	-	-	C	ko:K03303	-	ko00000,ko02000	L-lactate permease
PHIIFDDP_00829	0.0	carB	6.3.5.5	-	F	ko:K01955	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthase
PHIIFDDP_00830	3.47e-268	carA	6.3.5.5	-	F	ko:K01956	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthetase glutamine chain
PHIIFDDP_00831	2.04e-313	pyrC	3.5.2.3	-	F	ko:K01465	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
PHIIFDDP_00832	3.53e-228	pyrB	2.1.3.2	-	F	ko:K00609	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the ATCase OTCase family
PHIIFDDP_00833	1.01e-122	pyrR	2.4.2.9	-	F	ko:K02825	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000,ko03000	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
PHIIFDDP_00834	8.81e-212	pyrD	1.3.1.14, 1.3.98.1	-	F	ko:K00226,ko:K17828	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
PHIIFDDP_00835	1.56e-164	pyrF	4.1.1.23	-	F	ko:K01591	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
PHIIFDDP_00836	2.73e-154	pyrE	2.4.2.10	-	F	ko:K00762	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
PHIIFDDP_00838	2.68e-48	eriC	-	-	P	ko:K03281	-	ko00000	chloride
PHIIFDDP_00839	0.0	yjcA	-	-	S	ko:K19350	ko02010,map02010	ko00000,ko00001,ko01504,ko02000	ABC transporter
PHIIFDDP_00840	1.87e-58	-	-	-	-	-	-	-	-
PHIIFDDP_00841	1.63e-159	-	4.3.1.17	-	E	ko:K01752	ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230	ko00000,ko00001,ko01000	Serine dehydratase beta chain
PHIIFDDP_00842	4.47e-198	sdaAA	4.3.1.17	-	E	ko:K01752	ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230	ko00000,ko00001,ko01000	L-serine dehydratase, iron-sulfur-dependent, alpha subunit
PHIIFDDP_00843	6.51e-69	yitW	-	-	S	-	-	-	Iron-sulfur cluster assembly protein
PHIIFDDP_00844	1.24e-168	dapE	3.5.1.18	-	E	ko:K01439	ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000	succinyl-diaminopimelate desuccinylase
PHIIFDDP_00845	2.12e-311	lctO	1.13.12.4	-	C	ko:K00467,ko:K10530	ko00620,map00620	ko00000,ko00001,ko01000	L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases
PHIIFDDP_00846	1.92e-282	ackA	2.7.2.1	-	F	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PHIIFDDP_00847	0.0	potE	-	-	E	-	-	-	Amino Acid
PHIIFDDP_00848	0.0	-	-	-	-	-	-	-	-
PHIIFDDP_00849	5.06e-111	-	-	-	-	-	-	-	-
PHIIFDDP_00850	2.34e-123	yhaH	-	-	S	-	-	-	Protein of unknown function (DUF805)
PHIIFDDP_00851	6.49e-90	-	-	-	O	-	-	-	OsmC-like protein
PHIIFDDP_00852	3.34e-267	-	-	-	EGP	-	-	-	Major Facilitator Superfamily
PHIIFDDP_00853	9.15e-301	sptS	-	-	T	-	-	-	Histidine kinase
PHIIFDDP_00854	7.52e-136	dltr	-	-	K	-	-	-	response regulator
PHIIFDDP_00855	2.08e-145	-	-	-	T	-	-	-	Region found in RelA / SpoT proteins
PHIIFDDP_00856	0.0	gtfA	2.4.1.7	GH13	G	ko:K00690	ko00500,map00500	ko00000,ko00001,ko01000	Sucrose glucosyltransferase
PHIIFDDP_00857	0.0	melA	3.2.1.22	-	G	ko:K07407	ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603	ko00000,ko00001,ko01000	alpha-galactosidase
PHIIFDDP_00858	1.72e-268	msmX	-	-	P	ko:K10112	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
PHIIFDDP_00859	8.75e-197	-	-	-	P	ko:K10119	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PHIIFDDP_00860	8.41e-202	msmF	-	-	P	ko:K10118	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PHIIFDDP_00861	1.65e-304	msmE	-	-	G	ko:K10117	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding protein
PHIIFDDP_00862	3.25e-224	-	-	-	K	ko:K03484	-	ko00000,ko03000	Periplasmic binding protein domain
PHIIFDDP_00863	2.14e-48	-	-	-	-	-	-	-	-
PHIIFDDP_00864	2.89e-254	galM	5.1.3.3	-	G	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the interconversion of alpha and beta anomers of maltose
PHIIFDDP_00865	0.0	galT	2.7.7.12	-	G	ko:K00965	ko00052,ko00520,ko01100,ko04917,map00052,map00520,map01100,map04917	ko00000,ko00001,ko00002,ko01000	UDP-glucose--hexose-1-phosphate uridylyltransferase
PHIIFDDP_00866	9.87e-263	galK	2.7.1.6	-	F	ko:K00849	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
PHIIFDDP_00867	0.0	lacZ	3.2.1.23	-	G	ko:K12308	ko00052,map00052	ko00000,ko00001,ko01000	-beta-galactosidase
PHIIFDDP_00868	0.0	lacS	-	-	G	ko:K11104,ko:K16209	-	ko00000,ko02000	Transporter
PHIIFDDP_00869	4.02e-238	lacR	-	-	K	ko:K02529	-	ko00000,ko03000	Transcriptional regulator
PHIIFDDP_00870	0.0	lacL	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 2 family
PHIIFDDP_00871	5.29e-238	lacM	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	beta-galactosidase
PHIIFDDP_00872	3.61e-243	galE	5.1.3.2	-	M	ko:K01784	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the NAD(P)-dependent epimerase dehydratase family
PHIIFDDP_00873	2.57e-159	glpF	-	-	U	ko:K02440	-	ko00000,ko02000	Belongs to the MIP aquaporin (TC 1.A.8) family
PHIIFDDP_00874	8.17e-72	dhaM	2.7.1.121	-	S	ko:K05881	ko00561,map00561	ko00000,ko00001,ko01000,ko02000	PTS system fructose IIA component
PHIIFDDP_00875	8.05e-120	dhaL	2.7.1.121	-	S	ko:K05879	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Dak2
PHIIFDDP_00876	2.19e-224	dhaK	2.7.1.121	-	G	ko:K05878	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Dak1 domain
PHIIFDDP_00877	0.0	prtB	3.4.21.96	-	O	ko:K01361	-	ko00000,ko01000,ko01002,ko03110	Belongs to the peptidase S8 family
PHIIFDDP_00878	0.0	polYB	2.7.7.7	-	L	ko:K02346,ko:K03502	-	ko00000,ko01000,ko03400	Belongs to the DNA polymerase type-Y family
PHIIFDDP_00879	7.91e-83	-	-	-	-	-	-	-	-
PHIIFDDP_00880	2.26e-18	-	-	-	-	-	-	-	-
PHIIFDDP_00881	0.0	speA	4.1.1.17, 4.1.1.18, 4.1.1.19	-	E	ko:K01581,ko:K01582,ko:K01585	ko00310,ko00330,ko00480,ko00960,ko01100,ko01110,ko01130,map00310,map00330,map00480,map00960,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Orn/Lys/Arg decarboxylase, C-terminal domain
PHIIFDDP_00882	0.0	-	-	-	E	-	-	-	Amino acid permease
PHIIFDDP_00883	2.72e-228	-	-	-	L	-	-	-	DDE superfamily endonuclease
PHIIFDDP_00884	0.0	pacL	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	P-type ATPase
PHIIFDDP_00885	3.89e-222	pdxA	1.1.1.408, 1.1.1.409	-	H	ko:K22024	-	ko00000,ko01000	Pyridoxal phosphate biosynthetic protein PdxA
PHIIFDDP_00886	4.15e-186	-	4.3.3.7	-	EM	ko:K01714	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
PHIIFDDP_00887	5.45e-222	-	-	-	C	ko:K19954	-	ko00000,ko01000	Iron-containing alcohol dehydrogenase
PHIIFDDP_00888	7.35e-196	-	-	-	G	-	-	-	neuraminidase (sialidase)
PHIIFDDP_00889	2.14e-196	-	2.7.1.219, 2.7.1.220	-	S	ko:K22129	-	ko00000,ko01000	Putative nucleotide-binding of sugar-metabolising enzyme
PHIIFDDP_00890	4.35e-187	-	-	-	K	-	-	-	Propionate catabolism activator
PHIIFDDP_00891	7.14e-267	-	-	-	P	-	-	-	Citrate transporter
PHIIFDDP_00892	1.31e-33	-	-	-	-	-	-	-	-
PHIIFDDP_00893	4.33e-84	-	-	-	G	-	-	-	Domain of unknown function (DUF386)
PHIIFDDP_00894	1.44e-267	ackA	2.7.2.1	-	F	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PHIIFDDP_00895	1.59e-279	lmrB	-	-	U	ko:K18926	-	ko00000,ko00002,ko02000	Belongs to the major facilitator superfamily
PHIIFDDP_00896	4.92e-204	-	-	-	-	-	-	-	-
PHIIFDDP_00897	1.13e-217	-	-	-	-	-	-	-	-
PHIIFDDP_00898	0.0	glnA	6.3.1.2	-	E	ko:K01915	ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727	ko00000,ko00001,ko01000,ko04147	glutamine synthetase
PHIIFDDP_00899	4.14e-286	ynbB	-	-	P	-	-	-	aluminum resistance
PHIIFDDP_00900	1.98e-218	miaA	2.5.1.75	-	F	ko:K00791	ko00908,ko01100,ko01110,map00908,map01100,map01110	ko00000,ko00001,ko01000,ko01006,ko03016	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
PHIIFDDP_00901	2.87e-88	yqhL	-	-	P	-	-	-	Rhodanese-like protein
PHIIFDDP_00902	2.88e-47	yqgQ	-	-	S	-	-	-	Bacterial protein of unknown function (DUF910)
PHIIFDDP_00903	2.29e-154	gluP	3.4.21.105	-	S	ko:K19225	-	ko00000,ko01000,ko01002	Rhomboid family
PHIIFDDP_00904	1.94e-126	fthC	6.3.3.2	-	H	ko:K01934	ko00670,ko01100,map00670,map01100	ko00000,ko00001,ko01000	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
PHIIFDDP_00905	6.25e-29	rpmG	-	-	J	ko:K02913	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL33 family
PHIIFDDP_00906	0.0	pbp2b	-	-	M	ko:K00687,ko:K12553,ko:K21465,ko:K21466	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01011	Penicillin-binding Protein
PHIIFDDP_00907	0.0	-	-	-	S	-	-	-	membrane
PHIIFDDP_00908	7.04e-218	-	-	-	G	-	-	-	BadF/BadG/BcrA/BcrD ATPase family
PHIIFDDP_00909	9.43e-52	-	-	-	S	ko:K07473	-	ko00000,ko02048	RelB antitoxin
PHIIFDDP_00910	3.33e-70	-	-	-	S	ko:K19157	-	ko00000,ko01000,ko02048	Bacterial toxin of type II toxin-antitoxin system, YafQ
PHIIFDDP_00911	2.22e-60	hupB2	-	-	L	ko:K03530	-	ko00000,ko03032,ko03036,ko03400	Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
PHIIFDDP_00912	6.08e-178	-	3.6.3.34	-	HP	ko:K02013	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	abc transporter atp-binding protein
PHIIFDDP_00913	1.39e-204	isdF	-	-	U	ko:K02015	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PHIIFDDP_00914	1.45e-203	isdE	-	-	P	ko:K02016	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Periplasmic binding protein
PHIIFDDP_00915	1.73e-159	-	-	-	M	ko:K14193	ko05150,map05150	ko00000,ko00001	Iron Transport-associated domain
PHIIFDDP_00917	1.43e-119	-	-	-	-	-	-	-	-
PHIIFDDP_00918	5.26e-164	-	-	-	S	-	-	-	SLAP domain
PHIIFDDP_00919	3.5e-63	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2263)
PHIIFDDP_00920	7.04e-108	-	-	-	S	-	-	-	An automated process has identified a potential problem with this gene model
PHIIFDDP_00921	6.17e-174	-	-	-	S	-	-	-	Protein of unknown function (DUF3100)
PHIIFDDP_00922	1.75e-313	-	-	-	S	ko:K12941	-	ko00000,ko01002	Peptidase dimerisation domain
PHIIFDDP_00923	1.23e-295	-	-	-	Q	-	-	-	Imidazolonepropionase and related amidohydrolases
PHIIFDDP_00924	0.0	oppA	-	-	E	ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter
PHIIFDDP_00925	2.8e-190	-	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
PHIIFDDP_00926	0.0	sufI	-	-	Q	-	-	-	Multicopper oxidase
PHIIFDDP_00927	1.8e-34	-	-	-	-	-	-	-	-
PHIIFDDP_00928	3.72e-201	metQ	-	-	P	ko:K02073	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the nlpA lipoprotein family
PHIIFDDP_00929	8.21e-215	ldh3	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	lactate/malate dehydrogenase, alpha/beta C-terminal domain
PHIIFDDP_00930	2.55e-94	greA	-	-	K	ko:K03624	-	ko00000,ko03021	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PHIIFDDP_00931	0.0	pheT	6.1.1.20	-	J	ko:K01890	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PHIIFDDP_00932	1.75e-255	pheS	6.1.1.20	-	J	ko:K01889	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
PHIIFDDP_00933	1.4e-201	cjaA	-	-	ET	ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter substrate-binding protein
PHIIFDDP_00934	7.91e-164	glnQ	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
PHIIFDDP_00935	1.38e-148	glnP7	-	-	P	ko:K02029	-	ko00000,ko00002,ko02000	ABC transporter permease
PHIIFDDP_00936	1.88e-144	glnP9	-	-	P	ko:K02029	-	ko00000,ko00002,ko02000	ABC transporter, permease protein
PHIIFDDP_00938	1.02e-82	yodB	-	-	K	-	-	-	Transcriptional regulator, HxlR family
PHIIFDDP_00939	3.67e-178	spoU	-	-	J	ko:K03437	-	ko00000,ko03016	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PHIIFDDP_00940	5.58e-59	acyP	3.6.1.7	-	C	ko:K01512	ko00620,ko00627,ko01120,map00620,map00627,map01120	ko00000,ko00001,ko01000	Belongs to the acylphosphatase family
PHIIFDDP_00941	6.97e-216	yidC	-	-	U	ko:K03217	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044,ko03029	Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PHIIFDDP_00942	7.36e-114	-	-	-	S	ko:K19055	-	ko00000,ko01000,ko03016	Aminoacyl-tRNA editing domain
PHIIFDDP_00943	2.95e-283	-	-	-	S	-	-	-	SLAP domain
PHIIFDDP_00944	2.14e-71	-	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
PHIIFDDP_00945	5.63e-54	-	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
PHIIFDDP_00946	0.0	arlS	2.7.13.3	-	T	ko:K18940	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
PHIIFDDP_00947	3.52e-163	csrR	-	-	K	-	-	-	response regulator
PHIIFDDP_00948	1.13e-127	ylbN	-	-	S	ko:K07040	-	ko00000	Uncharacterized ACR, COG1399
PHIIFDDP_00949	1.39e-276	ylbM	-	-	S	-	-	-	Belongs to the UPF0348 family
PHIIFDDP_00950	5.09e-78	rsfS	-	-	J	ko:K09710	-	ko00000,ko03009	Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
PHIIFDDP_00951	1.59e-141	yqeK	-	-	H	-	-	-	Hydrolase, HD family
PHIIFDDP_00952	1.44e-151	nadD	2.7.7.18	-	H	ko:K00969	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
PHIIFDDP_00953	1.75e-256	yqeH	-	-	S	ko:K06948	-	ko00000,ko03009	Ribosome biogenesis GTPase YqeH
PHIIFDDP_00954	1.44e-110	yqeG	-	-	S	ko:K07015	-	ko00000	HAD phosphatase, family IIIA
PHIIFDDP_00955	3.19e-194	add	3.5.4.2, 3.5.4.4	-	F	ko:K01488,ko:K02029,ko:K21053	ko00230,ko01100,ko05340,map00230,map01100,map05340	ko00000,ko00001,ko00002,ko01000,ko02000	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
PHIIFDDP_00956	8.69e-76	rplT	-	-	J	ko:K02887	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
PHIIFDDP_00957	9.64e-38	rpmI	-	-	J	ko:K02916	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL35 family
PHIIFDDP_00958	3.2e-95	infC	-	-	J	ko:K02520	-	ko00000,ko03012,ko03029	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
PHIIFDDP_00959	1.18e-133	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
PHIIFDDP_00960	4.37e-165	-	-	-	S	ko:K01992	-	ko00000,ko00002,ko02000	domain protein
PHIIFDDP_00961	5.63e-188	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter
PHIIFDDP_00962	2.58e-98	-	-	-	S	-	-	-	Protein of unknown function (DUF3021)
PHIIFDDP_00963	5.83e-100	-	-	-	K	-	-	-	LytTr DNA-binding domain
PHIIFDDP_00964	6.41e-118	-	-	-	-	-	-	-	-
PHIIFDDP_00965	1.55e-222	-	-	-	V	-	-	-	Abi-like protein
PHIIFDDP_00966	0.0	thrS	6.1.1.3	-	J	ko:K01868	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
PHIIFDDP_00967	1.86e-215	dnaI	-	-	L	ko:K11144	-	ko00000,ko03032	Primosomal protein DnaI
PHIIFDDP_00968	0.0	dnaB2	-	-	L	ko:K03346	-	ko00000,ko03032	Replication initiation and membrane attachment
PHIIFDDP_00969	1.29e-106	nrdR	-	-	K	ko:K07738	-	ko00000,ko03000	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
PHIIFDDP_00970	2.16e-136	coaE	2.7.1.24	-	F	ko:K00859	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
PHIIFDDP_00971	1.92e-199	fpg	3.2.2.23, 4.2.99.18	-	L	ko:K10563	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
PHIIFDDP_00972	0.0	polA	2.7.7.7	-	L	ko:K02335	ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440	ko00000,ko00001,ko01000,ko03032,ko03400	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
PHIIFDDP_00973	2.95e-187	hflC	-	-	O	ko:K04087	-	ko00000,ko00002,ko01000	prohibitin homologues
PHIIFDDP_00974	1.33e-67	-	-	-	L	ko:K07473	-	ko00000,ko02048	RelB antitoxin
PHIIFDDP_00975	4.7e-237	-	-	-	S	-	-	-	Bacteriocin helveticin-J
PHIIFDDP_00977	1.74e-309	murC	6.3.2.8	-	M	ko:K01924	ko00471,ko00550,ko01100,map00471,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Belongs to the MurCDEF family
PHIIFDDP_00978	5.08e-156	XK27_10290	-	-	J	ko:K06878	-	ko00000	Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PHIIFDDP_00979	1.35e-71	ytpP	-	-	CO	-	-	-	Thioredoxin
PHIIFDDP_00981	2.16e-163	trmB	2.1.1.33	-	J	ko:K03439	-	ko00000,ko01000,ko03016	Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
PHIIFDDP_00982	1.29e-278	ecsB	-	-	U	ko:K01992	-	ko00000,ko00002,ko02000	ABC transporter
PHIIFDDP_00983	9.02e-175	ecsA	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PHIIFDDP_00984	7.99e-102	hit	-	-	FG	ko:K02503	-	ko00000,ko04147	Scavenger mRNA decapping enzyme C-term binding
PHIIFDDP_00985	1.2e-41	-	-	-	-	-	-	-	-
PHIIFDDP_00986	4.43e-196	prsA	5.2.1.8	-	M	ko:K07533	-	ko00000,ko01000,ko03110	Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
PHIIFDDP_00987	7.78e-91	eda	4.1.2.14, 4.1.3.42	-	G	ko:K01625	ko00030,ko00630,ko01100,ko01120,ko01200,map00030,map00630,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	KDPG and KHG aldolase
PHIIFDDP_00988	0.0	-	-	-	-	-	-	-	-
PHIIFDDP_00989	2.73e-240	yhaM	-	-	S	ko:K03698	-	ko00000,ko01000,ko03019	Metal dependent phosphohydrolases with conserved 'HD' motif.
PHIIFDDP_00990	0.0	yhaN	-	-	L	-	-	-	AAA domain
PHIIFDDP_00991	4.13e-296	yhaO	-	-	L	ko:K03547	-	ko00000,ko03400	Ser Thr phosphatase family protein
PHIIFDDP_00992	4.88e-72	yheA	-	-	S	-	-	-	Belongs to the UPF0342 family
PHIIFDDP_00993	0.0	pbp2A	2.4.1.129, 3.4.16.4	GT51	M	ko:K12555	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01003,ko01011	penicillin-binding protein
PHIIFDDP_00994	2.09e-208	rluA	5.4.99.23, 5.4.99.28, 5.4.99.29	-	J	ko:K06177,ko:K06180	-	ko00000,ko01000,ko03009,ko03016	Responsible for synthesis of pseudouridine from uracil
PHIIFDDP_00995	0.0	pps	2.7.9.2	-	H	ko:K01007	ko00620,ko00680,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate
PHIIFDDP_00996	7.87e-144	-	-	-	G	-	-	-	Phosphoglycerate mutase family
PHIIFDDP_00997	6.65e-183	glpF	-	-	U	ko:K02440	-	ko00000,ko02000	Belongs to the MIP aquaporin (TC 1.A.8) family
PHIIFDDP_00998	2.74e-06	-	-	-	S	-	-	-	PFAM Archaeal ATPase
PHIIFDDP_00999	5.77e-163	citG	2.4.2.52	-	H	ko:K05966	ko02020,map02020	ko00000,ko00001,ko01000	2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase
PHIIFDDP_01000	3.01e-251	-	-	-	I	-	-	-	transferase activity, transferring acyl groups other than amino-acyl groups
PHIIFDDP_01001	1.26e-233	-	-	-	S	-	-	-	PFAM Archaeal ATPase
PHIIFDDP_01002	1.88e-309	-	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PHIIFDDP_01003	1.56e-179	yecA	-	-	K	-	-	-	Helix-turn-helix domain, rpiR family
PHIIFDDP_01004	3.57e-61	-	-	-	S	-	-	-	Sugar efflux transporter for intercellular exchange
PHIIFDDP_01005	2.6e-234	-	-	-	K	-	-	-	helix_turn_helix, arabinose operon control protein
PHIIFDDP_01006	0.0	nagZ	3.2.1.52	-	G	ko:K01207	ko00520,ko00531,ko01100,ko01501,map00520,map00531,map01100,map01501	ko00000,ko00001,ko00002,ko01000	Glycosyl hydrolase family 3 N terminal domain
PHIIFDDP_01007	1.72e-154	nlhH_1	-	-	I	ko:K01066	-	ko00000,ko01000	acetylesterase activity
PHIIFDDP_01008	5.7e-119	-	-	-	S	-	-	-	Domain of unknown function (DUF5060)
PHIIFDDP_01009	1.73e-158	-	2.2.1.1	-	G	ko:K00615	ko00030,ko00710,ko01051,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01051,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Transketolase, pyrimidine binding domain
PHIIFDDP_01010	6.58e-88	glpK3	2.7.1.30	-	G	ko:K00864	ko00561,ko01100,ko03320,ko04626,map00561,map01100,map03320,map04626	ko00000,ko00001,ko01000,ko04147	FGGY family of carbohydrate kinases, C-terminal domain
PHIIFDDP_01011	2.66e-78	glpK3	2.7.1.30	-	G	ko:K00864	ko00561,ko01100,ko03320,ko04626,map00561,map01100,map03320,map04626	ko00000,ko00001,ko01000,ko04147	FGGY family of carbohydrate kinases, C-terminal domain
PHIIFDDP_01012	1.08e-19	glpK3	2.7.1.30	-	G	ko:K00864	ko00561,ko01100,ko03320,ko04626,map00561,map01100,map03320,map04626	ko00000,ko00001,ko01000,ko04147	FGGY family of carbohydrate kinases, C-terminal domain
PHIIFDDP_01013	7.07e-97	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
PHIIFDDP_01014	4.04e-279	-	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
PHIIFDDP_01015	1.26e-102	-	3.5.1.105	-	G	ko:K03478	-	ko00000,ko01000	YdjC-like protein
PHIIFDDP_01016	8.67e-107	-	-	-	G	-	-	-	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PHIIFDDP_01017	2.72e-44	-	-	-	K	-	-	-	DNA-binding transcription factor activity
PHIIFDDP_01018	9.71e-126	-	-	-	S	-	-	-	Alpha beta hydrolase
PHIIFDDP_01019	6.17e-173	-	-	-	G	-	-	-	Beta galactosidase small chain
PHIIFDDP_01020	4.33e-17	-	3.2.1.23, 3.2.1.31	-	G	ko:K01190,ko:K01195	ko00040,ko00052,ko00511,ko00531,ko00600,ko00860,ko00944,ko00983,ko01100,ko01110,ko04142,map00040,map00052,map00511,map00531,map00600,map00860,map00944,map00983,map01100,map01110,map04142	ko00000,ko00001,ko00002,ko01000	Glycosyl hydrolases family 2, TIM barrel domain
PHIIFDDP_01021	1.88e-299	-	3.2.1.21	GH3	G	ko:K05349	ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110	ko00000,ko00001,ko01000	Fibronectin type III-like domain
PHIIFDDP_01022	2.78e-148	pgmB	5.4.2.6	-	S	ko:K01838	ko00500,map00500	ko00000,ko00001,ko01000	beta-phosphoglucomutase
PHIIFDDP_01023	1.42e-232	-	3.2.1.37, 3.2.1.55	GH43,GH51	G	ko:K01198,ko:K01209	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 43 family
PHIIFDDP_01024	0.0	-	3.2.1.40	-	G	ko:K05989	-	ko00000,ko01000	Bacterial alpha-L-rhamnosidase C-terminal domain
PHIIFDDP_01025	1.67e-159	-	-	-	EGP	-	-	-	Major Facilitator Superfamily
PHIIFDDP_01026	0.0	-	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	Domain of unknown function (DUF4982)
PHIIFDDP_01027	2.02e-42	-	-	-	K	-	-	-	helix_turn_helix, arabinose operon control protein
PHIIFDDP_01028	1.51e-57	-	-	-	-	-	-	-	-
PHIIFDDP_01029	1.18e-66	-	-	-	-	-	-	-	-
PHIIFDDP_01030	9.79e-195	yitS	-	-	S	-	-	-	EDD domain protein, DegV family
PHIIFDDP_01031	3.12e-110	-	-	-	K	-	-	-	Domain of unknown function (DUF1836)
PHIIFDDP_01032	1.59e-96	-	-	-	L	-	-	-	COG3547 Transposase and inactivated derivatives
PHIIFDDP_01033	2.24e-56	-	-	-	G	-	-	-	Ribose/Galactose Isomerase
PHIIFDDP_01034	5.11e-154	citG	2.4.2.52	-	H	ko:K05966	ko02020,map02020	ko00000,ko00001,ko01000	2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase
PHIIFDDP_01035	1.26e-71	-	-	-	I	-	-	-	transferase activity, transferring acyl groups other than amino-acyl groups
PHIIFDDP_01036	8.39e-157	-	-	-	I	-	-	-	transferase activity, transferring acyl groups other than amino-acyl groups
PHIIFDDP_01037	1.53e-102	-	-	-	L	-	-	-	NUDIX domain
PHIIFDDP_01038	4.24e-217	fba	4.1.2.13, 4.1.2.29	-	G	ko:K01624,ko:K03339	ko00010,ko00030,ko00051,ko00562,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00562,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Fructose-1,6-bisphosphate aldolase, class II
PHIIFDDP_01039	0.0	argS	6.1.1.19	-	J	ko:K01887	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Arginyl-tRNA synthetase
PHIIFDDP_01040	5.86e-131	-	-	-	M	-	-	-	ErfK YbiS YcfS YnhG
PHIIFDDP_01041	1.83e-196	nnrD	4.2.1.136, 5.1.99.6	-	H	ko:K17758,ko:K17759	-	ko00000,ko01000	Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
PHIIFDDP_01042	2.65e-304	dacA	3.4.16.4	-	M	ko:K07258	ko00550,ko01100,map00550,map01100	ko00000,ko00001,ko01000,ko01002,ko01011	Belongs to the peptidase S11 family
PHIIFDDP_01044	1.25e-63	pspC	-	-	KT	ko:K03973	-	ko00000,ko02048,ko03000	PspC domain
PHIIFDDP_01045	1.39e-167	-	-	-	F	-	-	-	NUDIX domain
PHIIFDDP_01046	0.0	nadC2	6.3.4.21	-	F	ko:K00763	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
PHIIFDDP_01047	6.13e-138	pncA	-	-	Q	-	-	-	Isochorismatase family
PHIIFDDP_01048	3.38e-155	-	-	-	L	-	-	-	Bifunctional protein
PHIIFDDP_01049	2.09e-56	-	-	-	L	-	-	-	Psort location Cytoplasmic, score
PHIIFDDP_01050	5.28e-104	-	-	-	S	-	-	-	Cupin domain
PHIIFDDP_01052	1.1e-98	XK27_04775	-	-	S	ko:K09155	-	ko00000	PAS domain
PHIIFDDP_01053	0.0	ytgP	-	-	S	ko:K03328	-	ko00000	Polysaccharide biosynthesis protein
PHIIFDDP_01054	0.0	leuS	6.1.1.4	-	J	ko:K01869	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Belongs to the class-I aminoacyl-tRNA synthetase family
PHIIFDDP_01055	3.42e-157	yodM	3.6.1.27	-	I	ko:K19302	ko00550,map00550	ko00000,ko00001,ko01000,ko01011	Acid phosphatase homologues
PHIIFDDP_01056	1.66e-216	-	-	-	K	-	-	-	LysR substrate binding domain
PHIIFDDP_01057	9.58e-117	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
PHIIFDDP_01058	3.01e-294	yumB	1.6.99.3	-	C	ko:K03885	ko00190,map00190	ko00000,ko00001,ko01000	NADH dehydrogenase
PHIIFDDP_01059	4e-204	menA	2.5.1.74	-	H	ko:K02548	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01006	1,4-dihydroxy-2-naphthoate
PHIIFDDP_01060	8.31e-228	hepT	2.5.1.30	-	H	ko:K00805	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	Belongs to the FPP GGPP synthase family
PHIIFDDP_01061	1.02e-164	menG	2.1.1.163, 2.1.1.201	-	H	ko:K03183	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
PHIIFDDP_01062	0.0	cydD	-	-	CO	ko:K16012	ko02010,map02010	ko00000,ko00001,ko02000	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
PHIIFDDP_01063	0.0	cydC	-	-	CO	ko:K16013	ko02010,map02010	ko00000,ko00001,ko02000	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
PHIIFDDP_01064	5.08e-238	cydB	1.10.3.14	-	C	ko:K00426	ko00190,ko01100,ko02020,map00190,map01100,map02020	ko00000,ko00001,ko00002,ko01000	Cytochrome d ubiquinol oxidase subunit II
PHIIFDDP_01065	0.0	cydA	1.10.3.14	-	C	ko:K00425	ko00190,ko01100,ko02020,map00190,map01100,map02020	ko00000,ko00001,ko00002,ko01000	ubiquinol oxidase
PHIIFDDP_01067	2.76e-186	-	-	-	K	-	-	-	rpiR family
PHIIFDDP_01068	8.62e-250	-	-	-	S	ko:K09963	-	ko00000	Bacterial protein of unknown function (DUF871)
PHIIFDDP_01069	1.52e-224	ybbE	3.4.16.4	-	V	ko:K21469	ko00550,map00550	ko00000,ko00001,ko01000,ko01002,ko01011	Beta-lactamase
PHIIFDDP_01070	7.78e-188	murQ	4.2.1.126	-	G	ko:K07106	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
PHIIFDDP_01071	0.0	pts32BC	2.7.1.211	-	G	ko:K02808,ko:K02809,ko:K02810	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
PHIIFDDP_01072	0.0	mdr	-	-	EGP	-	-	-	Major Facilitator
PHIIFDDP_01073	8.87e-288	metK	2.5.1.6	-	H	ko:K00789	ko00270,ko01100,ko01110,ko01230,map00270,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
PHIIFDDP_01076	2.01e-211	-	-	-	P	ko:K02077	-	ko00000,ko00002,ko02000	Belongs to the bacterial solute-binding protein 9 family
PHIIFDDP_01079	9.92e-149	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
PHIIFDDP_01080	2.57e-148	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
PHIIFDDP_01081	5.44e-47	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
PHIIFDDP_01082	1.64e-38	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
PHIIFDDP_01083	0.0	serS	6.1.1.11	-	J	ko:K01875	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
PHIIFDDP_01084	1.23e-129	yjcK	2.3.1.128	-	J	ko:K03790	-	ko00000,ko01000,ko03009	Acetyltransferase (GNAT) domain
PHIIFDDP_01085	3.2e-143	-	-	-	S	-	-	-	SNARE associated Golgi protein
PHIIFDDP_01086	3.19e-197	-	-	-	I	-	-	-	alpha/beta hydrolase fold
PHIIFDDP_01087	5.95e-204	plcR	-	-	K	ko:K20480	ko02024,map02024	ko00000,ko00001,ko03000	Helix-turn-helix
PHIIFDDP_01088	4.44e-89	-	-	-	S	ko:K07133	-	ko00000	cog cog1373
PHIIFDDP_01089	4.94e-119	-	-	-	F	-	-	-	Nucleoside 2-deoxyribosyltransferase
PHIIFDDP_01090	0.0	gabD	1.2.1.16, 1.2.1.20, 1.2.1.79	-	C	ko:K00135	ko00250,ko00310,ko00350,ko00650,ko00760,ko01100,ko01120,map00250,map00310,map00350,map00650,map00760,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Belongs to the aldehyde dehydrogenase family
PHIIFDDP_01091	2.96e-221	-	-	-	-	-	-	-	-
PHIIFDDP_01092	0.0	ydgH	-	-	S	ko:K06994	-	ko00000	MMPL family
PHIIFDDP_01093	3.76e-128	yobS	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PHIIFDDP_01094	2.3e-206	-	3.5.2.6	-	V	ko:K17836	ko00311,ko01130,ko01501,map00311,map01130,map01501	ko00000,ko00001,ko00002,ko01000,ko01504	Beta-lactamase enzyme family
PHIIFDDP_01095	1.4e-207	corA	-	-	P	ko:K03284	-	ko00000,ko02000	CorA-like Mg2+ transporter protein
PHIIFDDP_01096	2.47e-309	-	-	-	G	ko:K02027	-	ko00000,ko00002,ko02000	Bacterial extracellular solute-binding protein
PHIIFDDP_01097	0.0	-	-	-	S	-	-	-	Zn-dependent metallo-hydrolase RNA specificity domain
PHIIFDDP_01098	5.62e-187	-	-	-	P	ko:K02026	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PHIIFDDP_01099	1.64e-202	-	-	-	P	ko:K02025	-	ko00000,ko00002,ko02000	ABC-type sugar transport systems, permease components
PHIIFDDP_01100	4.32e-258	malK	-	-	P	ko:K10112,ko:K17240	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ATPases associated with a variety of cellular activities
PHIIFDDP_01101	0.0	pepD1	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
PHIIFDDP_01102	2.95e-203	endA	-	-	F	ko:K15051	-	ko00000	DNA RNA non-specific endonuclease
PHIIFDDP_01103	2.7e-232	-	2.7.7.7	-	L	ko:K02342	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	EXOIII
PHIIFDDP_01104	3.6e-203	-	-	-	K	-	-	-	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
PHIIFDDP_01105	2.23e-150	yviA	-	-	S	-	-	-	Protein of unknown function (DUF421)
PHIIFDDP_01106	1.3e-94	-	-	-	S	-	-	-	Protein of unknown function (DUF3290)
PHIIFDDP_01107	1.15e-181	pnuC	-	-	H	ko:K03811	-	ko00000,ko02000	nicotinamide mononucleotide transporter
PHIIFDDP_01109	2.46e-170	-	-	-	S	-	-	-	PAS domain
PHIIFDDP_01110	0.0	-	-	-	V	-	-	-	ABC transporter transmembrane region
PHIIFDDP_01111	1.28e-228	pepR	3.4.11.5	-	E	ko:K01259	ko00330,map00330	ko00000,ko00001,ko01000,ko01002	Releases the N-terminal proline from various substrates
PHIIFDDP_01112	2.39e-166	-	-	-	T	-	-	-	Transcriptional regulatory protein, C terminal
PHIIFDDP_01113	2.34e-315	-	-	-	T	-	-	-	GHKL domain
PHIIFDDP_01114	3.9e-112	ykoJ	-	-	S	-	-	-	Peptidase propeptide and YPEB domain
PHIIFDDP_01115	7.16e-132	-	-	-	S	-	-	-	Peptidase propeptide and YPEB domain
PHIIFDDP_01116	4.7e-125	XK27_03150	2.3.1.57	-	K	ko:K22441	-	ko00000,ko01000	Acetyltransferase (GNAT) domain
PHIIFDDP_01117	1.99e-99	yybA	-	-	K	-	-	-	Transcriptional regulator
PHIIFDDP_01118	1.55e-305	-	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter transmembrane region
PHIIFDDP_01119	0.0	oppA	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
PHIIFDDP_01120	6.29e-82	-	-	-	S	ko:K08987	-	ko00000	Protein of unknown function (DUF1304)
PHIIFDDP_01121	1.59e-131	-	-	-	S	-	-	-	Peptidase propeptide and YPEB domain
PHIIFDDP_01122	5.16e-135	efp	-	-	J	ko:K02356	-	ko00000,ko03012	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
PHIIFDDP_01123	1.01e-220	coaA	2.7.1.33	-	F	ko:K00867	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Pantothenic acid kinase
PHIIFDDP_01124	4.61e-126	-	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase
PHIIFDDP_01125	1.36e-96	yjcF	-	-	S	-	-	-	Acetyltransferase (GNAT) domain
PHIIFDDP_01126	5.2e-186	aatB	-	-	ET	ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter substrate-binding protein
PHIIFDDP_01127	3.05e-139	glnQ	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	ABC transporter
PHIIFDDP_01128	4.45e-141	yecS_2	-	-	P	ko:K02029,ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter permease
PHIIFDDP_01129	0.0	helD	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	DNA helicase
PHIIFDDP_01130	1.51e-150	XK27_08875	-	-	O	-	-	-	PFAM peptidase M10A and M12B, matrixin and adamalysin
PHIIFDDP_01131	7.53e-163	gpm2	-	-	G	-	-	-	Phosphoglycerate mutase family
PHIIFDDP_01132	5.59e-310	-	-	-	S	-	-	-	response to antibiotic
PHIIFDDP_01133	5.45e-162	-	-	-	-	-	-	-	-
PHIIFDDP_01134	0.0	pacL3	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	P-type ATPase
PHIIFDDP_01135	2.56e-86	-	2.7.1.191	-	G	ko:K02793	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system fructose IIA component
PHIIFDDP_01136	5.1e-57	-	-	-	-	-	-	-	-
PHIIFDDP_01137	6.6e-14	-	-	-	-	-	-	-	-
PHIIFDDP_01138	1.35e-238	ansA	3.5.1.1	-	EJ	ko:K01424	ko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110	ko00000,ko00001,ko01000	L-asparaginase, type I
PHIIFDDP_01139	5.83e-176	-	-	-	K	ko:K03481	-	ko00000,ko03000	Helix-turn-helix domain, rpiR family
PHIIFDDP_01140	0.0	malH	3.2.1.122	GH4	G	ko:K01232	ko00500,map00500	ko00000,ko00001,ko01000	Family 4 glycosyl hydrolase C-terminal domain
PHIIFDDP_01141	7.49e-198	-	-	-	-	-	-	-	-
PHIIFDDP_01142	3.32e-13	-	-	-	-	-	-	-	-
PHIIFDDP_01143	6.63e-122	hpt	2.4.2.8	-	F	ko:K00760	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the purine pyrimidine phosphoribosyltransferase family
PHIIFDDP_01144	2.57e-138	-	-	-	K	ko:K06977	-	ko00000	acetyltransferase
PHIIFDDP_01146	7.37e-60	-	-	-	S	-	-	-	polysaccharide biosynthetic process
PHIIFDDP_01147	5.56e-136	-	-	-	S	ko:K09963	-	ko00000	Bacterial protein of unknown function (DUF871)
PHIIFDDP_01148	0.0	XK27_00340	3.1.3.5	-	F	ko:K01081	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the 5'-nucleotidase family
PHIIFDDP_01149	2.46e-22	-	-	-	L	-	-	-	COG2826 Transposase and inactivated derivatives, IS30 family
PHIIFDDP_01150	2.88e-32	-	-	-	L	-	-	-	COG2826 Transposase and inactivated derivatives, IS30 family
PHIIFDDP_01151	1.18e-151	-	-	-	L	-	-	-	COG2826 Transposase and inactivated derivatives, IS30 family
PHIIFDDP_01153	2.94e-122	-	-	-	L	-	-	-	reverse transcriptase
PHIIFDDP_01154	5.5e-155	rfbD	1.1.1.133	-	M	ko:K00067	ko00521,ko00523,ko01130,map00521,map00523,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
PHIIFDDP_01155	1.28e-69	-	-	-	-	ko:K19157	-	ko00000,ko01000,ko02048	-
PHIIFDDP_01156	1.23e-57	-	-	-	S	ko:K07473	-	ko00000,ko02048	RelB antitoxin
PHIIFDDP_01157	1.22e-201	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
PHIIFDDP_01158	1.97e-130	galU	2.7.7.9	-	M	ko:K00963	ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	UTP-glucose-1-phosphate uridylyltransferase
PHIIFDDP_01162	7.69e-228	rfbD	1.1.1.133	-	M	ko:K00067	ko00521,ko00523,ko01130,map00521,map00523,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
PHIIFDDP_01163	4.06e-151	rfbC	5.1.3.13	-	M	ko:K01790	ko00521,ko00523,ko01130,map00521,map00523,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
PHIIFDDP_01164	3.21e-212	rfbA	2.7.7.24	-	H	ko:K00973	ko00521,ko00523,ko00525,ko01130,map00521,map00523,map00525,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
PHIIFDDP_01165	7.19e-262	rfbB	4.2.1.46	-	M	ko:K01710	ko00521,ko00523,ko00525,ko01055,ko01130,map00521,map00523,map00525,map01055,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
PHIIFDDP_01166	1.63e-61	-	-	-	T	-	-	-	PemK-like, MazF-like toxin of type II toxin-antitoxin system
PHIIFDDP_01167	1.38e-273	-	-	-	KQ	-	-	-	helix_turn_helix, mercury resistance
PHIIFDDP_01168	1.05e-212	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
PHIIFDDP_01169	2.91e-214	-	-	-	GKT	ko:K03491	-	ko00000,ko03000	Mga helix-turn-helix domain
PHIIFDDP_01170	3.05e-64	hxlB	5.3.1.27	-	M	ko:K08094	ko00030,ko00680,ko01100,ko01120,ko01200,ko01230,map00030,map00680,map01100,map01120,map01200,map01230	ko00000,ko00001,ko00002,ko01000	SIS domain
PHIIFDDP_01171	7.71e-83	-	-	-	M	-	-	-	SIS domain
PHIIFDDP_01172	2.95e-98	-	-	-	S	-	-	-	Uncharacterised protein family UPF0047
PHIIFDDP_01173	1.38e-46	-	2.7.1.200	-	G	ko:K02774	ko00052,ko01100,ko02060,map00052,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
PHIIFDDP_01174	7.38e-271	-	-	-	G	ko:K02775	ko00052,ko01100,ko02060,map00052,map01100,map02060	ko00000,ko00001,ko00002,ko02000	PTS system sugar-specific permease component
PHIIFDDP_01175	8.25e-51	-	2.7.1.200	-	GT	ko:K02773	ko00052,ko01100,ko02060,map00052,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PHIIFDDP_01176	1.19e-85	rpe	5.1.3.1	-	G	ko:K01783	ko00030,ko00040,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the ribulose-phosphate 3-epimerase family
PHIIFDDP_01178	4.93e-186	galU	2.7.7.9	-	M	ko:K00963	ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	UTP-glucose-1-phosphate uridylyltransferase
PHIIFDDP_01179	2.52e-76	-	-	-	S	-	-	-	Acyltransferase family
PHIIFDDP_01181	2.83e-66	XK27_01125	-	-	L	ko:K07484	-	ko00000	PFAM IS66 Orf2 family protein
PHIIFDDP_01182	2.65e-12	-	-	-	S	-	-	-	Transposase C of IS166 homeodomain
PHIIFDDP_01183	3.78e-110	-	-	-	L	-	-	-	Transposase and inactivated derivatives
PHIIFDDP_01184	1.79e-83	-	-	-	L	ko:K07484	-	ko00000	Transposase IS66 family
PHIIFDDP_01186	8.46e-211	-	-	-	S	ko:K03328	-	ko00000	Membrane protein involved in the export of O-antigen and teichoic acid
PHIIFDDP_01187	7.85e-80	-	-	-	S	-	-	-	Core-2/I-Branching enzyme
PHIIFDDP_01188	3.32e-61	-	-	-	M	-	-	-	Capsular polysaccharide synthesis protein
PHIIFDDP_01189	1.31e-31	-	-	-	M	-	-	-	Glycosyltransferase like family 2
PHIIFDDP_01191	6.42e-196	-	-	-	M	-	-	-	Glycosyl transferases group 1
PHIIFDDP_01192	3.06e-108	-	-	-	S	-	-	-	Hexapeptide repeat of succinyl-transferase
PHIIFDDP_01193	6.18e-35	-	2.3.1.30	-	E	ko:K00640	ko00270,ko00920,ko01100,ko01110,ko01120,ko01200,ko01230,ko05111,map00270,map00920,map01100,map01110,map01120,map01200,map01230,map05111	ko00000,ko00001,ko00002,ko01000	serine acetyltransferase
PHIIFDDP_01194	1.08e-08	-	-	-	E	-	-	-	Bacterial transferase hexapeptide (six repeats)
PHIIFDDP_01195	1.41e-231	-	-	-	G	-	-	-	Glycosyltransferase Family 4
PHIIFDDP_01196	4.02e-262	wchF	-	GT4	M	ko:K12996	-	ko00000,ko01000,ko01003,ko01005	Domain of unknown function (DUF1972)
PHIIFDDP_01197	1.98e-156	epsE2	-	-	M	-	-	-	Bacterial sugar transferase
PHIIFDDP_01198	2.71e-185	ywqE	3.1.3.48	-	GM	ko:K01104	-	ko00000,ko01000	PHP domain protein
PHIIFDDP_01199	1.68e-161	ywqD	-	-	D	-	-	-	Capsular exopolysaccharide family
PHIIFDDP_01200	3.48e-190	epsB	-	-	M	-	-	-	biosynthesis protein
PHIIFDDP_01201	1.03e-243	brpA	-	-	K	-	-	-	Cell envelope-like function transcriptional attenuator common domain protein
PHIIFDDP_01202	2.09e-63	yoeB	-	-	S	ko:K19158	-	ko00000,ko01000,ko02048	YoeB-like toxin of bacterial type II toxin-antitoxin system
PHIIFDDP_01203	9.52e-56	-	-	-	L	ko:K07473	-	ko00000,ko02048	RelB antitoxin
PHIIFDDP_01205	5.39e-291	hflX	-	-	S	ko:K03665	-	ko00000,ko03009	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
PHIIFDDP_01206	1.22e-179	-	-	-	S	-	-	-	Cysteine-rich secretory protein family
PHIIFDDP_01207	3.94e-49	-	-	-	-	-	-	-	-
PHIIFDDP_01208	1.73e-167	-	-	-	M	ko:K21471	-	ko00000,ko01000,ko01002,ko01011	NlpC/P60 family
PHIIFDDP_01209	1.28e-174	-	-	-	M	ko:K21471	-	ko00000,ko01000,ko01002,ko01011	NlpC P60 family protein
PHIIFDDP_01210	7.28e-113	-	-	-	M	ko:K21471	-	ko00000,ko01000,ko01002,ko01011	NlpC/P60 family
PHIIFDDP_01211	1.01e-122	gmk2	2.7.4.8	-	F	ko:K00942	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko00002,ko01000	Guanylate kinase homologues.
PHIIFDDP_01212	7.8e-57	-	-	-	-	-	-	-	-
PHIIFDDP_01213	0.0	-	-	-	S	-	-	-	O-antigen ligase like membrane protein
PHIIFDDP_01214	8.77e-144	-	-	-	-	-	-	-	-
PHIIFDDP_01215	1.17e-101	nrdI	-	-	F	ko:K03647	-	ko00000	NrdI Flavodoxin like
PHIIFDDP_01216	4.13e-228	nrdF	1.17.4.1	-	F	ko:K00526	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PHIIFDDP_01217	4.05e-102	-	-	-	-	-	-	-	-
PHIIFDDP_01218	4.52e-143	-	-	-	S	-	-	-	Peptidase_C39 like family
PHIIFDDP_01219	7.36e-109	-	-	-	S	-	-	-	Threonine/Serine exporter, ThrE
PHIIFDDP_01220	2.2e-175	-	-	-	S	-	-	-	Putative threonine/serine exporter
PHIIFDDP_01221	0.0	-	-	-	S	-	-	-	ABC transporter
PHIIFDDP_01222	5.97e-82	-	-	-	-	-	-	-	-
PHIIFDDP_01223	8.69e-93	rimL	-	-	J	ko:K03817	-	ko00000,ko01000,ko03009	Acetyltransferase (GNAT) domain
PHIIFDDP_01224	2.04e-36	-	-	-	-	-	-	-	-
PHIIFDDP_01225	1.39e-160	-	-	-	S	ko:K07150	-	ko00000	Protein of unknown function (DUF554)
PHIIFDDP_01226	2.93e-279	brpA	-	-	K	-	-	-	Cell envelope-like function transcriptional attenuator common domain protein
PHIIFDDP_01227	0.0	pepF	-	-	E	ko:K08602	-	ko00000,ko01000,ko01002	oligoendopeptidase F
PHIIFDDP_01228	3.84e-09	-	-	-	S	-	-	-	Enterocin A Immunity
PHIIFDDP_01229	1.17e-267	metE	2.1.1.14	-	E	ko:K00549	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	methionine synthase, vitamin-B12 independent
PHIIFDDP_01230	3.98e-116	luxS	4.4.1.21	-	H	ko:K07173	ko00270,ko01100,ko01230,ko02024,ko02026,ko05111,map00270,map01100,map01230,map02024,map02026,map05111	ko00000,ko00001,ko00002,ko01000	Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
PHIIFDDP_01231	0.0	lctP	-	-	C	ko:K03303	-	ko00000,ko02000	L-lactate permease
PHIIFDDP_01232	4.55e-172	znuB	-	-	U	ko:K02075,ko:K09816	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC 3 transport family
PHIIFDDP_01233	2.2e-141	adcC	-	-	P	ko:K02074,ko:K09817,ko:K11710	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter
PHIIFDDP_01234	3.57e-188	-	-	-	P	ko:K02077	-	ko00000,ko00002,ko02000	Belongs to the bacterial solute-binding protein 9 family
PHIIFDDP_01235	5.64e-59	-	-	-	K	ko:K21903	-	ko00000,ko03000	helix_turn_helix, Arsenical Resistance Operon Repressor
PHIIFDDP_01236	0.0	fruA	2.7.1.202	-	GT	ko:K02768,ko:K02769,ko:K02770	ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphotransferase System
PHIIFDDP_01237	7.6e-216	pfkB	2.7.1.56	-	H	ko:K00882	ko00051,map00051	ko00000,ko00001,ko01000	Belongs to the carbohydrate kinase PfkB family. LacC subfamily
PHIIFDDP_01238	3.14e-175	fruR	-	-	K	ko:K03436	-	ko00000,ko03000	DeoR C terminal sensor domain
PHIIFDDP_01239	1.98e-276	natB	-	-	CP	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 family transporter protein
PHIIFDDP_01240	5.12e-211	natA	-	-	S	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PHIIFDDP_01241	2.18e-41	-	-	-	-	-	-	-	-
PHIIFDDP_01242	1.19e-88	-	-	-	-	-	-	-	-
PHIIFDDP_01243	1.92e-34	-	-	-	-	-	-	-	-
PHIIFDDP_01244	2.58e-41	-	-	-	K	ko:K07727	-	ko00000,ko03000	Transcriptional regulator
PHIIFDDP_01245	1.73e-109	-	-	-	-	-	-	-	-
PHIIFDDP_01246	2.34e-31	-	-	-	-	-	-	-	-
PHIIFDDP_01247	2.29e-253	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
PHIIFDDP_01250	2.79e-24	-	-	-	-	-	-	-	-
PHIIFDDP_01251	1.65e-83	-	-	-	-	-	-	-	-
PHIIFDDP_01252	5.59e-41	-	-	-	-	-	-	-	-
PHIIFDDP_01253	3.28e-185	-	-	-	K	ko:K07707	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko02022	LytTr DNA-binding domain
PHIIFDDP_01254	1.88e-257	-	2.7.13.3	-	T	ko:K07706	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	GHKL domain
PHIIFDDP_01256	1.07e-265	-	-	-	S	-	-	-	CAAX protease self-immunity
PHIIFDDP_01257	1.16e-11	-	-	-	-	-	-	-	-
PHIIFDDP_01258	2.61e-280	-	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
PHIIFDDP_01260	8.18e-89	-	-	-	-	-	-	-	-
PHIIFDDP_01261	8.52e-21	-	-	-	-	-	-	-	-
PHIIFDDP_01263	0.0	agl	3.2.1.20	GH31	G	ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 31 family
PHIIFDDP_01264	0.0	glcD	1.1.3.15	-	C	ko:K00104	ko00630,ko01100,ko01110,ko01120,ko01130,map00630,map01100,map01110,map01120,map01130	ko00000,ko00001,ko01000	FAD linked oxidases, C-terminal domain
PHIIFDDP_01265	4.48e-34	-	-	-	-	-	-	-	-
PHIIFDDP_01266	2.17e-35	-	-	-	-	-	-	-	-
PHIIFDDP_01267	1.95e-45	-	-	-	-	-	-	-	-
PHIIFDDP_01268	9.87e-70	-	-	-	S	-	-	-	Enterocin A Immunity
PHIIFDDP_01269	7.79e-186	racD	5.1.1.13	-	M	ko:K01779	ko00250,ko01054,map00250,map01054	ko00000,ko00001,ko01000	Belongs to the aspartate glutamate racemases family
PHIIFDDP_01270	0.0	murE	6.3.2.13, 6.3.2.7	-	M	ko:K01928,ko:K05362	ko00300,ko00550,ko01100,map00300,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
PHIIFDDP_01271	1.32e-270	-	-	-	T	-	-	-	His Kinase A (phosphoacceptor) domain
PHIIFDDP_01272	8.32e-157	vanR	-	-	K	-	-	-	response regulator
PHIIFDDP_01274	0.0	ndvA	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter
PHIIFDDP_01275	0.0	-	-	-	V	ko:K06147,ko:K06148	-	ko00000,ko02000	ABC transporter, ATP-binding protein
PHIIFDDP_01276	2.27e-136	-	-	-	S	-	-	-	Protein of unknown function (DUF1129)
PHIIFDDP_01277	6.88e-257	ychF	-	-	J	ko:K06942	-	ko00000,ko03009	ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
PHIIFDDP_01278	4.49e-59	yyzM	-	-	S	-	-	-	Bacterial protein of unknown function (DUF951)
PHIIFDDP_01279	7.41e-198	spo0J	-	-	K	ko:K03497	-	ko00000,ko03000,ko03036,ko04812	Belongs to the ParB family
PHIIFDDP_01280	4.99e-178	soj	-	-	D	ko:K03496	-	ko00000,ko03036,ko04812	Sporulation initiation inhibitor
PHIIFDDP_01281	3.96e-189	noc	-	-	K	ko:K03497	-	ko00000,ko03000,ko03036,ko04812	Belongs to the ParB family
PHIIFDDP_01282	3.66e-166	rsmG	2.1.1.170	-	J	ko:K03501	-	ko00000,ko01000,ko03009,ko03036	Specifically methylates the N7 position of a guanine in 16S rRNA
PHIIFDDP_01283	2.99e-75	cvpA	-	-	S	-	-	-	Colicin V production protein
PHIIFDDP_01284	5.24e-230	apbE	2.7.1.180	-	H	ko:K03734	-	ko00000,ko01000	Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
PHIIFDDP_01285	9.48e-194	-	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Tyrosine phosphatase family
PHIIFDDP_01286	2.21e-127	azr	1.5.1.36	-	S	ko:K22394	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	NADPH-dependent FMN reductase
PHIIFDDP_01287	1.39e-124	azo1	1.5.1.36, 1.7.1.6	-	S	ko:K03206,ko:K19784,ko:K22393	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	NADPH-dependent FMN reductase
PHIIFDDP_01288	1.07e-144	-	-	-	K	-	-	-	WHG domain
PHIIFDDP_01289	6.73e-51	-	-	-	-	-	-	-	-
PHIIFDDP_01290	0.0	pepD4	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
PHIIFDDP_01291	3.93e-198	metB	2.5.1.48	-	E	ko:K01739	ko00270,ko00450,ko00920,ko01100,ko01110,ko01130,ko01230,map00270,map00450,map00920,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Cys/Met metabolism PLP-dependent enzyme
PHIIFDDP_01292	4.3e-197	mccB	4.4.1.1, 4.4.1.2, 4.4.1.8	-	E	ko:K01760,ko:K17217	ko00260,ko00270,ko00450,ko00920,ko01100,ko01110,ko01130,ko01230,map00260,map00270,map00450,map00920,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	cystathionine
PHIIFDDP_01293	1.75e-126	metQ	-	-	P	ko:K02073	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the nlpA lipoprotein family
PHIIFDDP_01294	2.12e-132	lolD	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PHIIFDDP_01295	1.05e-233	yxeA	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter permease
PHIIFDDP_01296	1.7e-118	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PHIIFDDP_01297	2.35e-144	-	-	-	G	-	-	-	phosphoglycerate mutase
PHIIFDDP_01298	2.4e-181	-	-	-	S	ko:K06889	-	ko00000	Alpha/beta hydrolase family
PHIIFDDP_01299	3.56e-184	XK27_08125	-	-	S	ko:K09861	-	ko00000	Belongs to the UPF0246 family
PHIIFDDP_01300	5.5e-155	-	-	-	-	-	-	-	-
PHIIFDDP_01301	2.25e-202	-	-	-	C	-	-	-	Domain of unknown function (DUF4931)
PHIIFDDP_01302	6.48e-254	-	-	-	S	-	-	-	Putative peptidoglycan binding domain
PHIIFDDP_01303	2.61e-23	-	-	-	-	-	-	-	-
PHIIFDDP_01304	1.05e-119	-	-	-	S	-	-	-	membrane
PHIIFDDP_01305	1.77e-90	-	-	-	K	-	-	-	LytTr DNA-binding domain
PHIIFDDP_01306	6.93e-34	-	-	-	S	-	-	-	Sugar efflux transporter for intercellular exchange
PHIIFDDP_01307	0.0	dtpT	-	-	U	ko:K03305	-	ko00000	amino acid peptide transporter
PHIIFDDP_01308	0.0	pepN	3.4.11.2	-	E	ko:K01256	ko00480,ko01100,map00480,map01100	ko00000,ko00001,ko01000,ko01002	aminopeptidase
PHIIFDDP_01309	2.2e-79	lysM	-	-	M	-	-	-	LysM domain
PHIIFDDP_01310	1.08e-222	-	-	-	-	-	-	-	-
PHIIFDDP_01311	1.24e-290	mdtG2	-	-	EGP	ko:K08161	-	ko00000,ko02000	Transporter, major facilitator family protein
PHIIFDDP_01312	3.34e-117	ymdB	-	-	S	-	-	-	Macro domain protein
PHIIFDDP_01315	1.39e-197	malG	-	-	P	ko:K15772	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
PHIIFDDP_01316	7.36e-316	malF	-	-	P	ko:K15771	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PHIIFDDP_01317	1.61e-274	-	-	-	G	ko:K15770	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding protein
PHIIFDDP_01318	4.23e-268	msmX	-	-	P	ko:K10112	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
PHIIFDDP_01319	9.37e-150	pgmB	5.4.2.6	-	S	ko:K01838	ko00500,map00500	ko00000,ko00001,ko01000	beta-phosphoglucomutase
PHIIFDDP_01320	0.0	mapA	2.4.1.8	GH65	G	ko:K00691	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	hydrolase, family 65, central catalytic
PHIIFDDP_01321	0.0	nplT	3.2.1.133, 3.2.1.135, 3.2.1.54	GH13	G	ko:K01208	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 13 family
PHIIFDDP_01322	0.0	malA1	3.2.1.10, 3.2.1.20	GH13,GH31	G	ko:K01182,ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Alpha amylase, catalytic domain
PHIIFDDP_01323	1.5e-101	XK27_04775	-	-	S	ko:K09155	-	ko00000	PAS domain
PHIIFDDP_01324	1.58e-282	ackA	2.7.2.1	-	F	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PHIIFDDP_01325	6.36e-230	yvdE	-	-	K	-	-	-	helix_turn _helix lactose operon repressor
PHIIFDDP_01326	7.48e-188	-	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Tyrosine phosphatase family
PHIIFDDP_01327	0.0	glpK	2.7.1.30	-	F	ko:K00864	ko00561,ko01100,ko03320,ko04626,map00561,map01100,map03320,map04626	ko00000,ko00001,ko01000,ko04147	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
PHIIFDDP_01328	2.61e-195	thiD	2.7.1.49, 2.7.4.7	-	H	ko:K00941	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Phosphomethylpyrimidine kinase
PHIIFDDP_01329	8.54e-25	-	-	-	-	-	-	-	-
PHIIFDDP_01330	2.73e-33	-	-	-	-	-	-	-	-
PHIIFDDP_01331	4.83e-166	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
PHIIFDDP_01332	4.17e-63	yoeB	-	-	S	ko:K19158	-	ko00000,ko01000,ko02048	YoeB-like toxin of bacterial type II toxin-antitoxin system
PHIIFDDP_01333	2.45e-58	-	-	-	D	ko:K19159	-	ko00000,ko02048	Antitoxin component of a toxin-antitoxin (TA) module
PHIIFDDP_01334	2.05e-277	-	-	-	G	-	-	-	Transmembrane secretion effector
PHIIFDDP_01335	2.16e-291	-	-	-	V	-	-	-	ABC transporter transmembrane region
PHIIFDDP_01336	6.2e-89	-	-	-	L	-	-	-	RelB antitoxin
PHIIFDDP_01338	1.29e-169	cobQ	-	-	S	ko:K07009	-	ko00000	glutamine amidotransferase
PHIIFDDP_01339	3.65e-109	-	-	-	M	-	-	-	NlpC/P60 family
PHIIFDDP_01342	1.03e-51	-	-	-	-	-	-	-	-
PHIIFDDP_01343	8.79e-164	-	-	-	EG	-	-	-	EamA-like transporter family
PHIIFDDP_01344	1.19e-34	-	-	-	EG	-	-	-	EamA-like transporter family
PHIIFDDP_01345	4.04e-212	-	-	-	EG	-	-	-	EamA-like transporter family
PHIIFDDP_01346	1.12e-46	yicL	-	-	EG	-	-	-	EamA-like transporter family
PHIIFDDP_01347	2.08e-75	dpnM	2.1.1.72	-	H	ko:K06223	ko03430,map03430	ko00000,ko00001,ko01000,ko02048,ko03032,ko03400	Site-specific DNA-methyltransferase (adenine-specific)
PHIIFDDP_01348	1.85e-127	pinR1	-	-	L	-	-	-	Helix-turn-helix domain of Hin and related proteins, a family of DNA-binding domains unique to bacteria and represented by the Hin protein of Salmonella. The basic HTH domain is a simple fold comprised of three core helices that form a right-handed
PHIIFDDP_01349	2.41e-148	-	-	-	K	ko:K09017	-	ko00000,ko03000	Transcriptional regulator
PHIIFDDP_01350	0.0	-	-	-	M	ko:K01992	-	ko00000,ko00002,ko02000	Exporter of polyketide antibiotics
PHIIFDDP_01351	1.36e-214	ybhF_1	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter
PHIIFDDP_01352	2.15e-144	-	-	-	L	-	-	-	Resolvase, N terminal domain
PHIIFDDP_01353	9.4e-317	-	-	-	L	-	-	-	Probable transposase
PHIIFDDP_01354	7.44e-94	yicL	-	-	EG	-	-	-	EamA-like transporter family
PHIIFDDP_01355	4.61e-138	-	-	-	-	-	-	-	-
PHIIFDDP_01356	1.5e-141	-	-	-	-	-	-	-	-
PHIIFDDP_01357	1.84e-238	-	-	-	S	-	-	-	DUF218 domain
PHIIFDDP_01358	0.0	yheS_2	-	-	S	ko:K18231,ko:K19349	ko02010,map02010	br01600,ko00000,ko00001,ko01504,ko02000	ATPases associated with a variety of cellular activities
PHIIFDDP_01359	5.16e-115	-	-	-	-	-	-	-	-
PHIIFDDP_01360	1.09e-74	-	-	-	-	-	-	-	-
PHIIFDDP_01361	1.01e-312	purB	4.3.2.2	-	F	ko:K01756	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
PHIIFDDP_01362	0.0	purA	6.3.4.4	-	F	ko:K01939	ko00230,ko00250,ko01100,map00230,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
PHIIFDDP_01363	4.04e-240	guaC	1.7.1.7	-	F	ko:K00364	ko00230,map00230	ko00000,ko00001,ko01000	Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
PHIIFDDP_01366	5.06e-261	-	4.2.1.126	-	S	ko:K07106,ko:K09963	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Bacterial protein of unknown function (DUF871)
PHIIFDDP_01367	7.58e-244	asnA	6.3.1.1	-	F	ko:K01914	ko00250,ko00460,ko01100,ko01110,ko01230,map00250,map00460,map01100,map01110,map01230	ko00000,ko00001,ko01000	aspartate--ammonia ligase
PHIIFDDP_01368	1.85e-290	-	-	-	E	-	-	-	amino acid
PHIIFDDP_01369	5.04e-174	puuD	-	-	S	ko:K07010	-	ko00000,ko01002	peptidase C26
PHIIFDDP_01370	4.82e-310	yifK	-	-	E	ko:K03293	-	ko00000	Amino acid permease
PHIIFDDP_01371	3.01e-309	aapA	-	-	E	ko:K03293,ko:K11737	-	ko00000,ko02000	Amino acid permease
PHIIFDDP_01372	2.16e-150	sipS3	3.4.21.89	-	U	ko:K03100	ko02024,ko03060,map02024,map03060	ko00000,ko00001,ko01000,ko01002	Belongs to the peptidase S26 family
PHIIFDDP_01373	0.0	clpE	-	-	O	ko:K03697,ko:K04086	-	ko00000,ko03110	AAA domain (Cdc48 subfamily)
PHIIFDDP_01374	1.36e-212	-	-	-	S	-	-	-	Alpha/beta hydrolase of unknown function (DUF915)
PHIIFDDP_01375	2.18e-304	pts13C	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PHIIFDDP_01376	2.05e-162	-	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PHIIFDDP_01377	0.0	ylbB	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter permease
PHIIFDDP_01378	7.41e-166	ylbB	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter permease
PHIIFDDP_01379	1.96e-49	-	-	-	-	-	-	-	-
PHIIFDDP_01380	0.0	ytgP	-	-	S	ko:K03328	-	ko00000	Polysaccharide biosynthesis protein
PHIIFDDP_01381	3.85e-183	lysA2	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
PHIIFDDP_01382	1.76e-172	-	-	-	S	-	-	-	Protein of unknown function (DUF975)
PHIIFDDP_01383	2.79e-227	pbpX2	-	-	V	-	-	-	Beta-lactamase
PHIIFDDP_01384	9.71e-317	dltD	-	-	M	ko:K03740	ko01503,ko02020,ko05150,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01504	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
PHIIFDDP_01385	4.98e-48	dltC	6.1.1.13	-	J	ko:K14188	ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01000,ko01504	Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PHIIFDDP_01386	1.94e-309	dltB	-	-	M	ko:K03739	ko01503,ko02020,ko05150,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01504	MBOAT, membrane-bound O-acyltransferase family
PHIIFDDP_01387	0.0	dltA	6.1.1.13	-	H	ko:K03367	ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01000,ko01504	Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PHIIFDDP_01388	9.18e-27	-	-	-	S	-	-	-	D-Ala-teichoic acid biosynthesis protein
PHIIFDDP_01389	6.47e-64	-	-	-	-	-	-	-	-
PHIIFDDP_01390	2.3e-277	-	-	-	S	-	-	-	Membrane
PHIIFDDP_01391	3.41e-107	ykuL	-	-	S	-	-	-	(CBS) domain
PHIIFDDP_01392	0.0	cadA	-	-	P	-	-	-	P-type ATPase
PHIIFDDP_01393	1.4e-263	napA	-	-	P	-	-	-	Sodium/hydrogen exchanger family
PHIIFDDP_01394	0.0	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC transporter transmembrane region
PHIIFDDP_01395	2.42e-203	mutR	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
PHIIFDDP_01396	4.47e-69	-	-	-	-	-	-	-	-
PHIIFDDP_01397	1.02e-156	-	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
PHIIFDDP_01398	8.9e-249	-	-	-	S	-	-	-	DUF218 domain
PHIIFDDP_01399	0.0	-	-	-	V	ko:K02003,ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PHIIFDDP_01400	0.0	ppc	4.1.1.31	-	H	ko:K01595	ko00620,ko00680,ko00710,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00710,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
PHIIFDDP_01401	5.05e-131	-	-	-	S	-	-	-	ECF transporter, substrate-specific component
PHIIFDDP_01402	1.69e-256	tcsA	-	-	S	ko:K02058,ko:K07335	-	ko00000,ko00002,ko02000	ABC transporter substrate-binding protein PnrA-like
PHIIFDDP_01403	3.28e-257	tcsA	-	-	S	ko:K02058,ko:K07335	-	ko00000,ko00002,ko02000	ABC transporter substrate-binding protein PnrA-like
PHIIFDDP_01404	0.0	mglA	3.6.3.17	-	S	ko:K02056,ko:K06400	-	ko00000,ko00002,ko01000,ko02000	ABC transporter
PHIIFDDP_01405	3.87e-262	mglC	-	-	S	ko:K02057	-	ko00000,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
PHIIFDDP_01406	6.02e-220	yufQ	-	-	S	ko:K02057	-	ko00000,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
PHIIFDDP_01407	2.17e-205	-	-	-	S	-	-	-	Aldo/keto reductase family
PHIIFDDP_01408	4.67e-173	nagB	3.5.99.6	-	G	ko:K02564	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
PHIIFDDP_01409	9.85e-154	dak	2.7.1.76	-	F	ko:K10353	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000	deoxynucleoside kinase
PHIIFDDP_01410	9.04e-161	dgk2	2.7.1.76	-	F	ko:K10353	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000	deoxynucleoside kinase
PHIIFDDP_01411	2.9e-88	-	-	-	-	-	-	-	-
PHIIFDDP_01412	6.56e-182	-	-	-	S	-	-	-	haloacid dehalogenase-like hydrolase
PHIIFDDP_01413	6.82e-292	pbuG	-	-	S	ko:K06901	-	ko00000,ko02000	permease
PHIIFDDP_01414	7.84e-106	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
PHIIFDDP_01415	1.16e-99	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
PHIIFDDP_01416	2.43e-187	-	-	-	S	-	-	-	ABC-2 family transporter protein
PHIIFDDP_01417	4.62e-165	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
PHIIFDDP_01418	5.67e-296	pbuG	-	-	S	ko:K06901	-	ko00000,ko02000	permease
PHIIFDDP_01419	3.69e-54	-	-	-	L	ko:K07473	-	ko00000,ko02048	Addiction module antitoxin, RelB DinJ family
PHIIFDDP_01420	5.05e-11	-	-	-	-	-	-	-	-
PHIIFDDP_01421	1.02e-60	-	-	-	S	ko:K07124	-	ko00000	Enoyl-(Acyl carrier protein) reductase
PHIIFDDP_01422	3.36e-53	-	-	-	S	ko:K07124	-	ko00000	Enoyl-(Acyl carrier protein) reductase
PHIIFDDP_01423	4.96e-122	yneE	-	-	K	-	-	-	Transcriptional regulator
PHIIFDDP_01424	4.71e-81	yneE	-	-	K	-	-	-	Transcriptional regulator
PHIIFDDP_01425	1.56e-287	-	-	-	S	ko:K07133	-	ko00000	cog cog1373
PHIIFDDP_01426	4.51e-189	-	-	-	S	-	-	-	haloacid dehalogenase-like hydrolase
PHIIFDDP_01427	3.66e-292	pbuG	-	-	S	ko:K06901	-	ko00000,ko02000	permease
PHIIFDDP_01428	1.28e-38	-	-	-	-	-	-	-	-
PHIIFDDP_01429	1.02e-74	-	-	-	K	-	-	-	Helix-turn-helix domain
PHIIFDDP_01430	1.58e-101	-	-	-	S	ko:K11621	ko02020,map02020	ko00000,ko00001	Putative adhesin
PHIIFDDP_01431	8.9e-96	copY	-	-	K	ko:K02171	ko01501,map01501	ko00000,ko00001,ko00002,ko01504,ko03000	Penicillinase repressor
PHIIFDDP_01432	3.45e-83	-	-	-	S	-	-	-	Cupredoxin-like domain
PHIIFDDP_01433	7.39e-64	-	-	-	S	-	-	-	Cupredoxin-like domain
PHIIFDDP_01434	0.0	copA	3.6.3.3, 3.6.3.5, 3.6.3.54	-	P	ko:K01534,ko:K17686	ko01524,ko04016,map01524,map04016	ko00000,ko00001,ko01000	P-type ATPase
PHIIFDDP_01435	6.63e-147	crp2	-	-	K	ko:K10914,ko:K21562	ko02020,ko02024,ko02025,ko02026,ko05111,map02020,map02024,map02025,map02026,map05111	ko00000,ko00001,ko03000	helix_turn_helix, cAMP Regulatory protein
PHIIFDDP_01436	3.14e-137	-	-	-	-	-	-	-	-
PHIIFDDP_01437	1.83e-316	-	-	-	EGP	ko:K08368	-	ko00000,ko02000	Sugar (and other) transporter
PHIIFDDP_01438	6.46e-27	-	-	-	-	-	-	-	-
PHIIFDDP_01439	8.24e-271	-	-	-	-	-	-	-	-
PHIIFDDP_01440	0.0	eriC	-	-	P	ko:K03281	-	ko00000	chloride
PHIIFDDP_01441	0.0	gnd	1.1.1.343, 1.1.1.44	-	H	ko:K00033	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
PHIIFDDP_01442	9.7e-40	-	-	-	-	-	-	-	-
PHIIFDDP_01443	0.0	pox1	1.2.3.3	-	EH	ko:K00158	ko00620,ko01100,map00620,map01100	ko00000,ko00001,ko01000	Belongs to the TPP enzyme family
PHIIFDDP_01444	0.0	gidA	-	-	D	ko:K03495	-	ko00000,ko03016,ko03036	NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
PHIIFDDP_01445	0.0	mnmE	-	-	S	ko:K03650	-	ko00000,ko01000,ko03016	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
PHIIFDDP_01446	3.37e-192	yidC	-	-	U	ko:K03217	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044,ko03029	Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PHIIFDDP_01447	1.87e-81	rnpA	3.1.26.5	-	J	ko:K03536	-	ko00000,ko01000,ko03016	RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
PHIIFDDP_01448	3.26e-23	rpmH	-	-	J	ko:K02914	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL34 family
PHIIFDDP_01449	6.39e-316	dnaA	-	-	L	ko:K02313	ko02020,ko04112,map02020,map04112	ko00000,ko00001,ko03032,ko03036	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
PHIIFDDP_01450	1.99e-245	dnaN	2.7.7.7	-	L	ko:K02338	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
PHIIFDDP_01451	1.13e-48	yaaA	-	-	S	ko:K14761	-	ko00000,ko03009	S4 domain protein YaaA
PHIIFDDP_01452	7.3e-268	recF	-	-	L	ko:K03629	ko03440,map03440	ko00000,ko00001,ko03400	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
PHIIFDDP_01453	0.0	gyrB	5.99.1.3	-	L	ko:K02470	-	ko00000,ko01000,ko03032,ko03400	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PHIIFDDP_01454	0.0	gyrA	5.99.1.3	-	L	ko:K02469	-	ko00000,ko01000,ko03032,ko03400	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PHIIFDDP_01455	1.93e-65	rpsF	-	-	J	ko:K02990	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Binds together with S18 to 16S ribosomal RNA
PHIIFDDP_01456	7.46e-108	ssb	-	-	L	ko:K03111	ko03030,ko03430,ko03440,map03030,map03430,map03440	ko00000,ko00001,ko03029,ko03032,ko03400	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
PHIIFDDP_01457	1.89e-47	rpsR	-	-	J	ko:K02963	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
PHIIFDDP_01458	1.45e-117	-	-	-	E	-	-	-	Zn peptidase
PHIIFDDP_01459	5e-54	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
PHIIFDDP_01460	9.21e-56	-	-	-	-	-	-	-	-
PHIIFDDP_01461	1.1e-217	-	-	-	S	-	-	-	Bacteriocin helveticin-J
PHIIFDDP_01462	1.29e-256	-	-	-	S	-	-	-	SLAP domain
PHIIFDDP_01463	0.0	yybT	-	-	T	-	-	-	signaling protein consisting of a modified GGDEF domain and a DHH domain
PHIIFDDP_01464	3.87e-97	rplI	-	-	J	ko:K02939	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to the 23S rRNA
PHIIFDDP_01465	0.0	dnaB	3.6.4.12	-	L	ko:K02314	ko03030,ko04112,map03030,map04112	ko00000,ko00001,ko01000,ko03032	Participates in initiation and elongation during chromosome replication
PHIIFDDP_01466	3.91e-217	phnD	-	-	P	ko:K02044	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter, phosphonate, periplasmic substrate-binding protein
PHIIFDDP_01467	1.42e-218	degV1	-	-	S	-	-	-	DegV family
PHIIFDDP_01468	1.07e-171	-	-	-	V	-	-	-	ABC transporter transmembrane region
PHIIFDDP_01469	4.76e-213	scrK	2.7.1.4	-	GK	ko:K00847	ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100	ko00000,ko00001,ko01000	ROK family
PHIIFDDP_01470	5.42e-18	-	-	-	S	-	-	-	CsbD-like
PHIIFDDP_01471	1.2e-26	-	-	-	S	-	-	-	Transglycosylase associated protein
PHIIFDDP_01472	5.19e-292	-	-	-	I	-	-	-	Protein of unknown function (DUF2974)
PHIIFDDP_01473	2.03e-155	-	-	-	S	ko:K07507	-	ko00000,ko02000	MgtC family
PHIIFDDP_01481	8.38e-31	-	-	-	S	-	-	-	Zonular occludens toxin (Zot)
PHIIFDDP_01483	2.7e-128	yhdJ	2.1.1.72	-	L	ko:K00571,ko:K07319	-	ko00000,ko01000,ko02048	Belongs to the N(4) N(6)-methyltransferase family
PHIIFDDP_01484	4.67e-124	-	-	-	-	-	-	-	-
PHIIFDDP_01486	1.13e-39	-	-	-	L	-	-	-	Replication initiation factor
PHIIFDDP_01490	2.54e-69	-	-	-	M	-	-	-	Rib/alpha-like repeat
PHIIFDDP_01491	3.68e-05	-	-	-	-	-	-	-	-
PHIIFDDP_01493	4.85e-75	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
PHIIFDDP_01494	1.69e-32	yjdF3	-	-	S	-	-	-	Protein of unknown function (DUF2992)
PHIIFDDP_01495	8.85e-123	ogt	2.1.1.63	-	L	ko:K00567	-	ko00000,ko01000,ko03400	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
PHIIFDDP_01496	3.34e-304	-	-	-	L	ko:K07496	-	ko00000	Putative transposase DNA-binding domain
PHIIFDDP_01497	7.56e-148	-	-	-	L	-	-	-	Resolvase, N-terminal
PHIIFDDP_01498	4.37e-124	-	-	-	-	-	-	-	-
PHIIFDDP_01499	2.22e-20	-	-	-	P	-	-	-	Voltage gated chloride channel
PHIIFDDP_01502	0.0	-	-	-	L	ko:K07496	-	ko00000	Putative transposase DNA-binding domain
PHIIFDDP_01503	3.07e-80	-	-	-	L	-	-	-	Resolvase, N-terminal
PHIIFDDP_01504	5.79e-54	-	-	-	-	-	-	-	-
PHIIFDDP_01507	0.0	-	-	-	S	-	-	-	Uncharacterised protein family (UPF0236)
PHIIFDDP_01508	1.25e-28	-	-	-	-	-	-	-	-
PHIIFDDP_01511	6.72e-27	-	-	-	-	-	-	-	-
PHIIFDDP_01512	5.5e-29	-	-	-	-	-	-	-	-
PHIIFDDP_01516	1.19e-30	-	-	-	P	-	-	-	Voltage gated chloride channel
PHIIFDDP_01517	5.1e-240	-	-	-	C	-	-	-	FMN-dependent dehydrogenase
PHIIFDDP_01518	1.05e-69	-	-	-	-	-	-	-	-
PHIIFDDP_01519	3.35e-56	-	-	-	-	-	-	-	-
PHIIFDDP_01520	1.33e-295	glyA	2.1.2.1	-	E	ko:K00600	ko00260,ko00460,ko00630,ko00670,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko01523,map00260,map00460,map00630,map00670,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map01523	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
PHIIFDDP_01521	0.0	-	-	-	E	-	-	-	amino acid
PHIIFDDP_01522	1.64e-200	yhaX	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
PHIIFDDP_01523	0.0	dexB	3.2.1.70	-	G	ko:K01215	-	ko00000,ko01000	Alpha amylase, catalytic domain protein
PHIIFDDP_01524	1.07e-52	rpmE	-	-	J	ko:K02909	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L31
PHIIFDDP_01525	0.0	murF	6.3.2.10	-	M	ko:K01929	ko00300,ko00550,ko01100,ko01502,map00300,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
PHIIFDDP_01526	0.0	cshA	3.6.4.13	-	F	ko:K05592	ko03018,map03018	ko00000,ko00001,ko01000,ko03009,ko03019	DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
PHIIFDDP_01527	1.33e-79	acpS	2.7.8.7	-	I	ko:K00997	ko00770,map00770	ko00000,ko00001,ko01000	Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
PHIIFDDP_01528	1.62e-276	alr	5.1.1.1, 5.1.1.5	-	E	ko:K01775,ko:K20707	ko00473,ko01100,ko01502,map00473,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
PHIIFDDP_01529	1.23e-166	-	-	-	S	-	-	-	(CBS) domain
PHIIFDDP_01530	1.19e-233	ldh	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	Belongs to the LDH MDH superfamily. LDH family
PHIIFDDP_01531	1.89e-134	pth	3.1.1.29	-	J	ko:K01056	-	ko00000,ko01000,ko03012	The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
PHIIFDDP_01532	0.0	mfd	-	-	L	ko:K03723	ko03420,map03420	ko00000,ko00001,ko01000,ko03400	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
PHIIFDDP_01533	7.32e-46	yabO	-	-	J	-	-	-	S4 domain protein
PHIIFDDP_01534	7.52e-78	divIC	-	-	D	ko:K13052	-	ko00000,ko03036	Septum formation initiator
PHIIFDDP_01535	3.95e-82	-	-	-	J	ko:K07571	-	ko00000	S1 RNA binding domain
PHIIFDDP_01536	1.66e-308	tilS	2.4.2.8, 6.3.4.19	-	J	ko:K04075,ko:K15780	ko00230,ko01100,ko01110,map00230,map01100,map01110	ko00000,ko00001,ko01000,ko03016	Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
PHIIFDDP_01537	0.0	ftsH	-	-	O	ko:K03798	-	ko00000,ko00002,ko01000,ko01002,ko03110	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
PHIIFDDP_01538	1.37e-214	hslO	-	-	O	ko:K04083	-	ko00000,ko03110	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
PHIIFDDP_01539	2.37e-249	dus	-	-	J	ko:K05540	-	ko00000,ko01000,ko03016	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PHIIFDDP_01540	0.0	lysS	6.1.1.6	-	J	ko:K04567	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-II aminoacyl-tRNA synthetase family
PHIIFDDP_01543	0.0	XK27_00340	3.1.3.5	-	F	ko:K01081	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the 5'-nucleotidase family
PHIIFDDP_01545	2.99e-114	-	-	-	D	-	-	-	COG1674 DNA segregation ATPase FtsK SpoIIIE and related proteins
PHIIFDDP_01546	1.49e-114	-	-	-	D	-	-	-	COG1674 DNA segregation ATPase FtsK SpoIIIE and related proteins
PHIIFDDP_01549	9.42e-233	-	-	-	L	-	-	-	COG3547 Transposase and inactivated derivatives
PHIIFDDP_01550	6.47e-58	-	-	-	-	-	-	-	-
PHIIFDDP_01551	1.13e-49	-	-	-	L	ko:K07497	-	ko00000	COG2963 Transposase and inactivated derivatives
PHIIFDDP_01552	0.0	ydiF	-	-	S	ko:K06158	-	ko00000,ko03012	ABC transporter, ATP-binding protein
PHIIFDDP_01553	8.74e-146	rex	-	-	K	ko:K01926	-	ko00000,ko03000	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
PHIIFDDP_01554	2.14e-234	scrR	-	-	K	ko:K03484	-	ko00000,ko03000	helix_turn _helix lactose operon repressor
PHIIFDDP_01555	0.0	scrB	3.2.1.26	GH32	G	ko:K01193	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	invertase
PHIIFDDP_01556	0.0	scrA	2.7.1.211	-	G	ko:K02808,ko:K02809,ko:K02810	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
PHIIFDDP_01557	6.12e-231	-	-	-	M	-	-	-	CHAP domain
PHIIFDDP_01558	2.79e-102	-	-	-	-	-	-	-	-
PHIIFDDP_01559	1.06e-58	groS	-	-	O	ko:K04078	-	ko00000,ko03029,ko03110	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
PHIIFDDP_01560	0.0	groL	-	-	O	ko:K04077	ko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
PHIIFDDP_01561	0.0	mutS	-	-	L	ko:K03555	ko03430,map03430	ko00000,ko00001,ko03400	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
PHIIFDDP_01562	0.0	mutL	-	-	L	ko:K03572	ko03430,map03430	ko00000,ko00001,ko03400	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
PHIIFDDP_01563	3.89e-132	ruvA	3.6.4.12	-	L	ko:K03550	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
PHIIFDDP_01564	1.39e-237	ruvB	3.6.4.12	-	L	ko:K03551	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
PHIIFDDP_01565	7.58e-69	yajC	-	-	U	ko:K03210	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Preprotein translocase
PHIIFDDP_01566	0.0	zwf	1.1.1.363, 1.1.1.49	-	G	ko:K00036	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,ko05230,map00030,map00480,map01100,map01110,map01120,map01130,map01200,map05230	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
PHIIFDDP_01567	1.51e-268	dinB	2.7.7.7	-	L	ko:K02346	-	ko00000,ko01000,ko03400	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
PHIIFDDP_01568	1.29e-230	nrnA	3.1.13.3, 3.1.3.7	-	S	ko:K06881	ko00920,ko01100,ko01120,map00920,map01100,map01120	ko00000,ko00001,ko01000,ko03400	DHHA1 domain protein
PHIIFDDP_01569	1.32e-305	cshB	3.6.4.13	-	JKL	ko:K05592,ko:K18692	ko03018,map03018	ko00000,ko00001,ko01000,ko03009,ko03019	DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
PHIIFDDP_01570	0.0	alaS	6.1.1.7	-	J	ko:K01872	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
PHIIFDDP_01571	5.32e-57	yrzL	-	-	S	-	-	-	Belongs to the UPF0297 family
PHIIFDDP_01572	9.37e-96	yrrK	-	-	J	ko:K07447	-	ko00000,ko01000	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
PHIIFDDP_01573	1.18e-66	yrzB	-	-	S	-	-	-	Belongs to the UPF0473 family
PHIIFDDP_01574	0.0	mutS2	-	-	L	ko:K07456	ko03430,map03430	ko00000,ko00001,ko03400	Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
PHIIFDDP_01575	5.37e-72	trxA	-	-	O	ko:K03671	ko04621,ko05418,map04621,map05418	ko00000,ko00001,ko03110	Belongs to the thioredoxin family
PHIIFDDP_01576	2.34e-76	mscL	-	-	M	ko:K03282	-	ko00000,ko02000	Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
PHIIFDDP_01577	5.62e-95	yslB	-	-	S	-	-	-	Protein of unknown function (DUF2507)
PHIIFDDP_01578	1.23e-187	murI	3.6.1.66, 5.1.1.3	-	M	ko:K01776,ko:K02428	ko00230,ko00471,ko01100,map00230,map00471,map01100	ko00000,ko00001,ko01000,ko01011	Provides the (R)-glutamate required for cell wall biosynthesis
PHIIFDDP_01579	1.64e-143	rdgB	3.6.1.66	-	F	ko:K02428	ko00230,map00230	ko00000,ko00001,ko01000	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
PHIIFDDP_01580	5.35e-39	-	-	-	-	-	-	-	-
PHIIFDDP_01581	5.53e-147	-	-	-	-	ko:K01992	-	ko00000,ko00002,ko02000	-
PHIIFDDP_01582	1.3e-176	-	-	-	-	-	-	-	-
PHIIFDDP_01583	3.18e-126	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
PHIIFDDP_01584	2.12e-187	ykuT	-	-	M	ko:K16052,ko:K22044	-	ko00000,ko02000	mechanosensitive ion channel
PHIIFDDP_01585	2.96e-23	ytxG	-	-	S	-	-	-	protein containing a divergent version of the methyl-accepting chemotaxis-like domain
PHIIFDDP_01586	3.09e-71	-	-	-	-	-	-	-	-
PHIIFDDP_01587	1.13e-272	pepQ	3.4.13.9	-	E	ko:K01271	-	ko00000,ko01000,ko01002	Creatinase/Prolidase N-terminal domain
PHIIFDDP_01588	1.5e-232	ccpA	-	-	K	ko:K02529	-	ko00000,ko03000	catabolite control protein A
PHIIFDDP_01589	0.0	-	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	glycerophosphoryl diester phosphodiesterase
PHIIFDDP_01590	2.84e-73	-	-	-	-	-	-	-	-
PHIIFDDP_01591	0.0	sasH	3.1.3.5, 3.1.3.6, 3.1.4.16, 3.6.1.45	-	F	ko:K01081,ko:K01119,ko:K07004,ko:K08693,ko:K11751	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the 5'-nucleotidase family
PHIIFDDP_01592	6.48e-136	yutD	-	-	S	-	-	-	Protein of unknown function (DUF1027)
PHIIFDDP_01593	1.1e-184	nagD	3.1.3.41	-	G	ko:K01101	ko00627,ko01120,map00627,map01120	ko00000,ko00001,ko01000	Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
PHIIFDDP_01594	2.15e-137	-	-	-	S	-	-	-	Protein of unknown function (DUF1461)
PHIIFDDP_01595	8.39e-151	dedA	-	-	S	ko:K03975	-	ko00000	SNARE-like domain protein
PHIIFDDP_01596	1.02e-233	yumC	1.18.1.2, 1.19.1.1	-	C	ko:K21567	-	ko00000,ko01000	Ferredoxin--NADP reductase
PHIIFDDP_01613	6.13e-140	int3	-	-	L	-	-	-	Belongs to the 'phage' integrase family
PHIIFDDP_01614	1.79e-18	int3	-	-	L	-	-	-	Belongs to the 'phage' integrase family
PHIIFDDP_01615	1.32e-107	-	-	-	D	ko:K03496	-	ko00000,ko03036,ko04812	VirC1 protein
PHIIFDDP_01617	3.28e-126	-	-	-	-	-	-	-	-
PHIIFDDP_01619	6.61e-98	-	-	-	KLT	-	-	-	serine threonine protein kinase
PHIIFDDP_01620	4.27e-296	-	-	-	V	ko:K06147,ko:K06148	-	ko00000,ko02000	ABC transporter transmembrane region
PHIIFDDP_01621	1.39e-121	-	-	-	-	-	-	-	-
PHIIFDDP_01622	9.81e-158	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
PHIIFDDP_01623	1.55e-16	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
PHIIFDDP_01635	2.84e-285	-	2.4.1.337	GT4	M	ko:K19002	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000,ko01003	Glycosyl transferase 4-like domain
PHIIFDDP_01636	9.03e-257	cpoA	2.4.1.208	GT4	M	ko:K13677,ko:K13678	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000,ko01003	Glycosyltransferase, group 1 family protein
PHIIFDDP_01637	8.57e-227	mprF	-	-	S	ko:K07027	-	ko00000,ko02000	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
PHIIFDDP_01638	0.0	ltaS	2.7.8.20	-	M	ko:K19005	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
PHIIFDDP_01639	1.3e-40	secG	-	-	U	ko:K03075	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Preprotein translocase
PHIIFDDP_01640	0.0	rnr	-	-	J	ko:K12573	ko03018,map03018	ko00000,ko00001,ko01000,ko03016,ko03019	3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
PHIIFDDP_01641	1.58e-101	smpB	-	-	J	ko:K03664	-	ko00000	the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
PHIIFDDP_01643	2.72e-236	manL	2.7.1.191	-	G	ko:K02793,ko:K02794	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system sorbose subfamily IIB component
PHIIFDDP_01644	9.65e-181	manY	-	-	G	ko:K02746,ko:K02795	ko00051,ko00052,ko00520,ko01100,ko02060,map00051,map00052,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	PTS system
PHIIFDDP_01645	3.51e-222	manN	-	-	G	ko:K02796	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	system, mannose fructose sorbose family IID component
PHIIFDDP_01646	2.76e-83	-	-	-	S	-	-	-	Domain of unknown function (DUF956)
PHIIFDDP_01647	2.07e-203	-	-	-	K	-	-	-	Transcriptional regulator
PHIIFDDP_01648	3.67e-114	-	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	transferase hexapeptide repeat
PHIIFDDP_01649	2.5e-312	cycA	-	-	E	ko:K03293,ko:K11737	-	ko00000,ko02000	Amino acid permease
PHIIFDDP_01650	0.0	adhE	1.1.1.1, 1.2.1.10	-	C	ko:K04072	ko00010,ko00071,ko00350,ko00620,ko00625,ko00626,ko00650,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00620,map00625,map00626,map00650,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	belongs to the iron- containing alcohol dehydrogenase family
PHIIFDDP_01651	0.0	glmS	2.6.1.16	-	M	ko:K00820	ko00250,ko00520,ko01100,ko01130,ko04931,map00250,map00520,map01100,map01130,map04931	ko00000,ko00001,ko01000,ko01002	Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
PHIIFDDP_01652	0.0	mtlR	-	-	K	ko:K03483	-	ko00000,ko03000	Mga helix-turn-helix domain
PHIIFDDP_01653	0.0	mtlA	2.7.1.197	-	G	ko:K02799,ko:K02800	ko00051,ko02060,map00051,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
PHIIFDDP_01654	5.75e-103	mtlF	2.7.1.197	-	G	ko:K02798	ko00051,ko02060,map00051,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PHIIFDDP_01655	1.98e-279	mtlD	1.1.1.17	-	C	ko:K00009	ko00051,map00051	ko00000,ko00001,ko01000	mannitol-1-phosphate 5-dehydrogenase activity
PHIIFDDP_01656	1.05e-171	-	4.1.1.44	-	S	ko:K01607	ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220	ko00000,ko00001,ko01000	Carboxymuconolactone decarboxylase family
PHIIFDDP_01657	1.66e-42	-	-	-	-	-	-	-	-
PHIIFDDP_01658	2.52e-93	apfA	3.6.1.61	-	F	ko:K18445	ko00230,map00230	ko00000,ko00001,ko01000	Nudix hydrolase
PHIIFDDP_01659	1.65e-87	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
PHIIFDDP_01660	2.64e-61	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
PHIIFDDP_01662	0.0	-	-	-	V	ko:K06147,ko:K06148	-	ko00000,ko02000	ABC transporter transmembrane region
PHIIFDDP_01663	0.0	pckA	4.1.1.49	-	H	ko:K01610	ko00010,ko00020,ko00620,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00710,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Phosphoenolpyruvate carboxykinase
PHIIFDDP_01664	0.0	-	-	-	S	-	-	-	TerB-C domain
PHIIFDDP_01665	0.0	-	-	-	P	-	-	-	P-loop Domain of unknown function (DUF2791)
PHIIFDDP_01666	0.0	-	-	-	L	ko:K03724	-	ko00000,ko01000,ko03400	DEAD DEAH box helicase
PHIIFDDP_01667	1.59e-78	-	-	-	-	-	-	-	-
PHIIFDDP_01668	5.69e-185	nfrA	1.5.1.38	-	C	ko:K19285	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	nitroreductase
PHIIFDDP_01672	6.02e-188	-	-	-	EP	-	-	-	Plasmid replication protein
PHIIFDDP_01673	8.21e-27	-	-	-	-	-	-	-	-
PHIIFDDP_01674	2.13e-236	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
PHIIFDDP_01675	2.84e-80	psiE	-	-	S	ko:K13256	-	ko00000	Phosphate-starvation-inducible E
PHIIFDDP_01676	5.34e-146	-	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	Maltose acetyltransferase
PHIIFDDP_01677	1.09e-91	-	-	-	S	-	-	-	Iron-sulphur cluster biosynthesis
PHIIFDDP_01679	1.04e-41	-	-	-	-	-	-	-	-
PHIIFDDP_01680	1.18e-221	pphA	3.1.3.16	-	T	ko:K07313	-	ko00000,ko01000	Calcineurin-like phosphoesterase
PHIIFDDP_01681	1.25e-17	-	-	-	-	-	-	-	-
PHIIFDDP_01682	3.39e-29	licC	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PHIIFDDP_01683	1.56e-84	licC	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PHIIFDDP_01684	9.51e-37	licC	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PHIIFDDP_01685	1.33e-130	-	-	-	M	-	-	-	LysM domain protein
PHIIFDDP_01686	8.45e-213	-	-	-	D	-	-	-	nuclear chromosome segregation
PHIIFDDP_01687	1.37e-139	-	-	-	G	-	-	-	Phosphoglycerate mutase family
PHIIFDDP_01688	2.1e-141	-	-	-	G	-	-	-	Histidine phosphatase superfamily (branch 1)
PHIIFDDP_01689	6.56e-145	-	-	-	G	-	-	-	Antibiotic biosynthesis monooxygenase
PHIIFDDP_01690	1.19e-164	glpQ1	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	glycerophosphoryl diester phosphodiesterase
PHIIFDDP_01691	9.02e-229	lacI	-	-	K	ko:K02529	-	ko00000,ko03000	helix_turn _helix lactose operon repressor
PHIIFDDP_01692	2.01e-304	msmE	-	-	G	ko:K10120	-	ko00000,ko00002,ko02000	Bacterial extracellular solute-binding protein
PHIIFDDP_01693	3.08e-210	-	-	-	P	ko:K10121	-	ko00000,ko00002,ko02000	ABC-type sugar transport systems, permease components
PHIIFDDP_01694	2.81e-197	msmG	-	-	G	ko:K02026,ko:K10122	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PHIIFDDP_01695	0.0	sacA	3.2.1.26	GH32	G	ko:K01193	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Glycosyl hydrolases family 32
PHIIFDDP_01696	2.55e-269	msmX	-	-	P	ko:K10112	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
PHIIFDDP_01697	0.0	gtfA	2.4.1.7	GH13	G	ko:K00690	ko00500,map00500	ko00000,ko00001,ko01000	Sucrose glucosyltransferase
PHIIFDDP_01699	0.0	mgtA	3.6.3.2	-	P	ko:K01531	-	ko00000,ko01000	COG0474 Cation transport ATPase
PHIIFDDP_01700	6.03e-270	araT	2.6.1.57	-	E	ko:K00832,ko:K00841	ko00270,ko00300,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01230,map00270,map00300,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase
PHIIFDDP_01701	7.23e-238	XK27_10475	-	-	S	-	-	-	Oxidoreductase family, NAD-binding Rossmann fold
PHIIFDDP_01702	2.69e-157	rpiA1	5.3.1.6	-	G	ko:K01807	ko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
PHIIFDDP_01703	3e-186	-	-	-	K	-	-	-	SIS domain
PHIIFDDP_01704	3.9e-308	slpX	-	-	S	-	-	-	SLAP domain
PHIIFDDP_01705	6.39e-32	-	-	-	S	-	-	-	transposase or invertase
PHIIFDDP_01706	1.48e-14	-	-	-	-	-	-	-	-
PHIIFDDP_01707	7.62e-306	npr	1.11.1.1	-	C	ko:K05910	-	ko00000,ko01000	NADH oxidase
PHIIFDDP_01710	0.0	oppA2	-	-	E	ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
PHIIFDDP_01711	5.33e-233	-	-	-	-	-	-	-	-
PHIIFDDP_01712	9.75e-163	gntR1	-	-	K	ko:K03710	-	ko00000,ko03000	UTRA
PHIIFDDP_01713	3.68e-93	tagD	2.7.7.39	-	IM	ko:K00980	ko00564,map00564	ko00000,ko00001,ko01000	Glycerol-3-phosphate cytidylyltransferase
PHIIFDDP_01714	5.23e-172	tagA	2.4.1.187	GT26	F	ko:K05946	ko05111,map05111	ko00000,ko00001,ko01000,ko01003	Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
PHIIFDDP_01715	1.77e-262	-	-	-	M	-	-	-	Glycosyl transferases group 1
PHIIFDDP_01716	0.0	pncB	6.3.4.21	-	F	ko:K00763	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
PHIIFDDP_01717	6.65e-196	nadE	6.3.1.5	-	F	ko:K01916	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
PHIIFDDP_01718	0.0	pacL	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	P-type ATPase
PHIIFDDP_01719	2.16e-285	-	-	-	M	-	-	-	CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
PHIIFDDP_01720	0.0	epsU	-	-	S	ko:K03328	-	ko00000	Polysaccharide biosynthesis protein
PHIIFDDP_01721	1.91e-173	-	-	-	M	-	-	-	Glycosyltransferase sugar-binding region containing DXD motif
PHIIFDDP_01722	9.14e-110	ydcK	-	-	S	ko:K03095	-	ko00000	Belongs to the SprT family
PHIIFDDP_01724	7.74e-126	acmA	3.2.1.17, 3.2.1.96	-	NU	ko:K01185,ko:K01227	ko00511,map00511	ko00000,ko00001,ko01000	mannosyl-glycoprotein
PHIIFDDP_01725	0.0	pcrA	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	ATP-dependent DNA helicase
PHIIFDDP_01726	0.0	ligA	6.5.1.2	-	L	ko:K01972	ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430	ko00000,ko00001,ko01000,ko03032,ko03400	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
PHIIFDDP_01727	6.25e-268	camS	-	-	S	-	-	-	sex pheromone
PHIIFDDP_01728	5.42e-67	gatC	6.3.5.6, 6.3.5.7	-	J	ko:K02435	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PHIIFDDP_01729	0.0	gatA	6.3.5.6, 6.3.5.7	-	J	ko:K02433	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
PHIIFDDP_01730	0.0	gatB	6.3.5.6, 6.3.5.7	-	J	ko:K02434	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PHIIFDDP_01731	9.65e-220	dagK	2.7.1.107	-	G	ko:K07029	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko01000	Lipid kinase
PHIIFDDP_01733	1.47e-82	-	-	-	K	-	-	-	transcriptional regulator
PHIIFDDP_01734	3.4e-144	ybhL	-	-	S	ko:K06890	-	ko00000	Belongs to the BI1 family
PHIIFDDP_01735	1.92e-64	-	-	-	-	-	-	-	-
PHIIFDDP_01736	1.65e-94	-	-	-	I	-	-	-	transferase activity, transferring acyl groups other than amino-acyl groups
PHIIFDDP_01737	1.86e-291	nhaC	-	-	C	ko:K03315	-	ko00000,ko02000	Na H antiporter NhaC
PHIIFDDP_01738	1.01e-256	flp	-	-	V	-	-	-	Beta-lactamase
PHIIFDDP_01739	0.0	rumA_2	2.1.1.190	-	J	ko:K03215	-	ko00000,ko01000,ko03009	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PHIIFDDP_01740	1.42e-122	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
PHIIFDDP_01745	0.0	qacA	-	-	EGP	-	-	-	Major Facilitator
PHIIFDDP_01746	1.52e-119	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PHIIFDDP_01747	0.0	-	4.2.1.53	-	S	ko:K10254	-	ko00000,ko01000	Myosin-crossreactive antigen
PHIIFDDP_01748	6.13e-110	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
PHIIFDDP_01749	6.17e-121	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
PHIIFDDP_01750	1.05e-259	-	-	-	V	ko:K06147,ko:K06148	-	ko00000,ko02000	ABC transporter transmembrane region
PHIIFDDP_01751	1.39e-54	-	-	-	-	-	-	-	-
PHIIFDDP_01752	3.07e-202	-	1.1.1.346	-	S	ko:K06221	-	ko00000,ko01000	reductase
PHIIFDDP_01753	8.97e-47	-	-	-	-	-	-	-	-
PHIIFDDP_01754	0.0	-	3.6.4.12	-	K	ko:K03655	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Putative DNA-binding domain
PHIIFDDP_01755	1.66e-303	pyrP	-	-	F	ko:K02824	-	ko00000,ko02000	Permease
PHIIFDDP_01756	7.16e-116	pyrR	2.4.2.9	-	F	ko:K02825	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000,ko03000	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
PHIIFDDP_01757	0.0	qacA	-	-	EGP	-	-	-	Major Facilitator
PHIIFDDP_01758	4.43e-272	pmrA	-	-	EGP	ko:K08161	-	ko00000,ko02000	MFS_1 like family
PHIIFDDP_01759	3.3e-173	-	-	-	-	-	-	-	-
PHIIFDDP_01760	8.5e-131	-	-	-	-	-	-	-	-
PHIIFDDP_01761	1.07e-266	pepA	-	-	E	-	-	-	M42 glutamyl aminopeptidase
PHIIFDDP_01762	0.0	ykpA	-	-	S	-	-	-	ABC transporter, ATP-binding protein
PHIIFDDP_01763	1.01e-221	ydhF	-	-	S	-	-	-	Aldo keto reductase
PHIIFDDP_01764	5.05e-191	-	-	-	-	-	-	-	-
PHIIFDDP_01765	5.38e-307	steT	-	-	E	ko:K03294	-	ko00000	amino acid
PHIIFDDP_01766	2.92e-313	steT	-	-	E	ko:K03294	-	ko00000	amino acid
PHIIFDDP_01767	2.62e-166	-	-	-	F	-	-	-	glutamine amidotransferase
PHIIFDDP_01768	2.49e-189	peb1A	-	-	ET	ko:K10039	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
PHIIFDDP_01769	2.53e-106	-	-	-	K	-	-	-	Transcriptional regulator, MarR family
PHIIFDDP_01770	0.0	XK27_09600	-	-	V	ko:K06147,ko:K18891	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter, ATP-binding protein
PHIIFDDP_01771	0.0	XK27_09605	-	-	V	ko:K18892	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter transmembrane region
PHIIFDDP_01772	1.79e-131	ykoE	-	-	S	ko:K16925	-	ko00000,ko00002,ko02000	ABC-type cobalt transport system, permease component
PHIIFDDP_01773	0.0	-	-	-	G	-	-	-	MFS/sugar transport protein
PHIIFDDP_01774	9.12e-145	udk	2.7.1.48	-	F	ko:K00876	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	Zeta toxin
PHIIFDDP_01775	1.19e-174	glnQ	-	-	E	ko:K10041	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
PHIIFDDP_01776	5.24e-191	glnH	-	-	ET	ko:K10039	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
PHIIFDDP_01777	7.42e-123	glnM	-	-	P	ko:K10040	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
PHIIFDDP_01778	3.65e-141	glnP	-	-	P	ko:K10040	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
PHIIFDDP_01779	8.51e-211	-	-	-	S	-	-	-	Protein of unknown function (DUF2974)
PHIIFDDP_01780	2.09e-110	-	-	-	-	-	-	-	-
PHIIFDDP_01781	1.67e-294	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2325)
PHIIFDDP_01782	2.67e-309	srrA1	-	-	G	ko:K02027,ko:K17244	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding protein
PHIIFDDP_01783	1.79e-209	-	-	-	C	-	-	-	Domain of unknown function (DUF4931)
PHIIFDDP_01784	2.09e-215	rbsK	2.7.1.15	-	H	ko:K00852	ko00030,map00030	ko00000,ko00001,ko01000	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PHIIFDDP_01785	5.23e-161	rpiA	5.3.1.6	-	G	ko:K01807	ko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
PHIIFDDP_01786	0.0	kup	-	-	P	ko:K03549	-	ko00000,ko02000	Transport of potassium into the cell
PHIIFDDP_01787	4.28e-224	rihC	3.2.2.1	-	F	ko:K01239,ko:K01250,ko:K12700	ko00230,ko00760,ko01100,map00230,map00760,map01100	ko00000,ko00001,ko01000	Nucleoside
PHIIFDDP_01788	6.63e-174	gntR	-	-	K	-	-	-	UbiC transcription regulator-associated domain protein
PHIIFDDP_01789	1.29e-197	-	3.1.3.102, 3.1.3.104	-	S	ko:K20861	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	hydrolase
PHIIFDDP_01790	2.9e-79	-	-	-	S	-	-	-	Enterocin A Immunity
PHIIFDDP_01791	2.68e-175	-	-	-	K	ko:K22103	-	ko00000,ko03000	DeoR C terminal sensor domain
PHIIFDDP_01792	0.0	xfp	4.1.2.22, 4.1.2.9	-	G	ko:K01621	ko00030,ko00710,ko01100,ko01120,map00030,map00710,map01100,map01120	ko00000,ko00001,ko01000	Phosphoketolase
PHIIFDDP_01793	5.31e-205	-	-	-	S	-	-	-	Phospholipase, patatin family
PHIIFDDP_01794	3.84e-191	-	-	-	S	-	-	-	hydrolase
PHIIFDDP_01795	0.0	glvC	2.7.1.208	-	G	ko:K02749,ko:K02750	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system, EIIB
PHIIFDDP_01796	6.89e-190	glvR	-	-	K	ko:K03481	-	ko00000,ko03000	Helix-turn-helix domain, rpiR family
PHIIFDDP_01797	8.81e-103	-	-	-	-	-	-	-	-
PHIIFDDP_01798	1.96e-113	ptbA	2.7.1.208	-	G	ko:K02755,ko:K02777,ko:K20107,ko:K20108	ko00010,ko00500,ko00520,ko02026,ko02060,ko05111,map00010,map00500,map00520,map02026,map02060,map05111	ko00000,ko00001,ko00002,ko01000,ko02000	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
PHIIFDDP_01799	7.18e-52	-	-	-	-	-	-	-	-
PHIIFDDP_01800	7.48e-155	-	-	-	C	-	-	-	nitroreductase
PHIIFDDP_01801	0.0	yhdP	-	-	S	-	-	-	Transporter associated domain
PHIIFDDP_01802	8.59e-133	hpt	2.4.2.8	-	F	ko:K00760	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the purine pyrimidine phosphoribosyltransferase family
PHIIFDDP_01803	0.0	-	1.3.5.4	-	C	ko:K00244	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	ko00000,ko00001,ko00002,ko01000	FAD binding domain
PHIIFDDP_01804	5.88e-132	-	-	-	S	ko:K09963	-	ko00000	Bacterial protein of unknown function (DUF871)
PHIIFDDP_01805	3.82e-28	-	-	-	S	ko:K09963	-	ko00000	Bacterial protein of unknown function (DUF871)
PHIIFDDP_01806	1.18e-309	-	-	-	V	-	-	-	MatE
PHIIFDDP_01807	2.52e-28	-	-	-	L	-	-	-	PFAM transposase, IS4 family protein
PHIIFDDP_01808	4.8e-66	-	-	-	L	-	-	-	PFAM transposase, IS4 family protein
PHIIFDDP_01809	0.0	-	1.3.5.4	-	C	ko:K00244	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	ko00000,ko00001,ko00002,ko01000	FAD binding domain
PHIIFDDP_01810	2.22e-296	-	-	-	E	ko:K03294	-	ko00000	amino acid
PHIIFDDP_01811	7.44e-168	lys	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
PHIIFDDP_01812	2.83e-281	yfmL	-	-	L	-	-	-	DEAD DEAH box helicase
PHIIFDDP_01813	3.76e-316	chbC	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PHIIFDDP_01815	1.62e-278	mnaA	5.1.3.14	-	G	ko:K01791	ko00520,ko01100,ko05111,map00520,map01100,map05111	ko00000,ko00001,ko00002,ko01000,ko01005	Belongs to the UDP-N-acetylglucosamine 2-epimerase family
PHIIFDDP_01816	3.7e-113	gtcA1	-	-	S	-	-	-	Teichoic acid glycosylation protein
PHIIFDDP_01817	5.14e-105	ykuP	-	-	C	ko:K03839	-	ko00000	Flavodoxin
PHIIFDDP_01818	2.45e-211	map	3.4.11.18	-	E	ko:K01265	-	ko00000,ko01000,ko01002	Methionine Aminopeptidase
PHIIFDDP_01819	3.44e-209	rbn	-	-	S	ko:K07058	-	ko00000	Belongs to the UPF0761 family
PHIIFDDP_01820	1.6e-215	galU	2.7.7.9	-	M	ko:K00963	ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	UTP-glucose-1-phosphate uridylyltransferase
PHIIFDDP_01821	1.81e-274	atoB	1.1.1.88, 2.3.1.9	-	I	ko:K00054,ko:K00626	ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the thiolase family
PHIIFDDP_01822	3.65e-273	mvaA	1.1.1.88, 2.3.1.9	-	C	ko:K00054,ko:K00626	ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the HMG-CoA reductase family
PHIIFDDP_01823	2.14e-278	mvaS	2.3.3.10	-	I	ko:K01641	ko00072,ko00280,ko00650,ko00900,ko01100,ko01110,ko01130,map00072,map00280,map00650,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Hydroxymethylglutaryl-CoA synthase
PHIIFDDP_01824	7.74e-61	-	-	-	-	-	-	-	-
PHIIFDDP_01825	1.84e-32	ybcH	-	-	D	ko:K06889	-	ko00000	Alpha beta
PHIIFDDP_01826	2.67e-151	ybcH	-	-	D	ko:K06889	-	ko00000	Alpha beta
PHIIFDDP_01827	0.0	rumA_1	2.1.1.190, 2.1.1.35	-	J	ko:K00557,ko:K03215	-	ko00000,ko01000,ko03009,ko03016	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PHIIFDDP_01828	2.79e-185	recX	-	-	S	ko:K03565	-	ko00000,ko03400	Regulatory protein RecX
PHIIFDDP_01829	7.1e-111	-	-	-	-	-	-	-	-
PHIIFDDP_01830	3.85e-98	-	-	-	-	-	-	-	-
PHIIFDDP_01831	1.24e-181	hlyX	-	-	S	ko:K03699	-	ko00000,ko02042	Transporter associated domain
PHIIFDDP_01832	0.0	prfC	-	-	J	ko:K02837	-	ko00000,ko03012	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
PHIIFDDP_01833	5.93e-60	XK27_09445	-	-	S	-	-	-	Domain of unknown function (DUF1827)
PHIIFDDP_01834	0.0	clpE	-	-	O	ko:K03697	-	ko00000,ko03110	Belongs to the ClpA ClpB family
PHIIFDDP_01835	2.6e-37	-	-	-	-	-	-	-	-
PHIIFDDP_01836	1.29e-54	ptsH	-	-	G	ko:K11189	-	ko00000,ko02000	phosphocarrier protein HPR
PHIIFDDP_01837	0.0	ptsI	2.7.3.9	-	G	ko:K08483	ko02060,map02060	ko00000,ko00001,ko01000,ko02000	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
PHIIFDDP_01838	7.64e-88	spxA	-	-	K	ko:K16509	-	ko00000	Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
PHIIFDDP_01839	2.19e-174	mecA	-	-	NOT	ko:K16511	-	ko00000	Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
PHIIFDDP_01840	6.73e-208	coiA	-	-	S	ko:K06198	-	ko00000	Competence protein
PHIIFDDP_01841	1.41e-148	yjbH	-	-	Q	-	-	-	Thioredoxin
PHIIFDDP_01842	4.21e-144	-	-	-	S	-	-	-	CYTH
PHIIFDDP_01843	1.7e-147	yjbM	2.7.6.5	-	S	ko:K07816	ko00230,map00230	ko00000,ko00001,ko01000	RelA SpoT domain protein
PHIIFDDP_01844	1.91e-195	nadK	2.7.1.23	-	F	ko:K00858	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
PHIIFDDP_01845	1.88e-219	rluD2	5.4.99.23	-	J	ko:K06180	-	ko00000,ko01000,ko03009	Responsible for synthesis of pseudouridine from uracil
PHIIFDDP_01846	0.0	mycA	4.2.1.53	-	S	ko:K10254	-	ko00000,ko01000	Myosin-crossreactive antigen
PHIIFDDP_01847	3.09e-121	-	-	-	S	-	-	-	SNARE associated Golgi protein
PHIIFDDP_01848	1.23e-256	pgl	3.1.1.31	-	G	ko:K07404	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Lactonase, 7-bladed beta-propeller
PHIIFDDP_01849	1.99e-87	srlB	2.7.1.198	-	G	ko:K02781	ko00051,ko02060,map00051,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system glucitol/sorbitol-specific IIA component
PHIIFDDP_01850	2.19e-270	XK27_05220	-	-	S	-	-	-	AI-2E family transporter
PHIIFDDP_01851	6.08e-136	cspR	2.1.1.207	-	J	ko:K03216	-	ko00000,ko01000,ko03016	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
PHIIFDDP_01852	3.12e-91	-	-	-	S	-	-	-	Protein of unknown function (DUF1149)
PHIIFDDP_01853	0.0	ftsK	-	-	D	ko:K03466	-	ko00000,ko03036	Belongs to the FtsK SpoIIIE SftA family
PHIIFDDP_01854	1.15e-281	ymfF	-	-	S	-	-	-	Peptidase M16 inactive domain protein
PHIIFDDP_01855	9.49e-302	ymfH	-	-	S	-	-	-	Peptidase M16
PHIIFDDP_01856	6.87e-172	fabG	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Enoyl-(Acyl carrier protein) reductase
PHIIFDDP_01857	1.63e-154	ymfM	-	-	S	ko:K15539	-	ko00000	Helix-turn-helix domain
PHIIFDDP_01858	3.92e-123	pgsA	2.7.8.5	-	I	ko:K00995	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
PHIIFDDP_01859	2.02e-249	recA	-	-	L	ko:K03553	ko03440,map03440	ko00000,ko00001,ko00002,ko03400	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
PHIIFDDP_01860	4.75e-290	rny	-	-	S	ko:K18682	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	Endoribonuclease that initiates mRNA decay
PHIIFDDP_01861	1.94e-268	tagO	2.7.8.33, 2.7.8.35	-	M	ko:K02851	-	ko00000,ko01000,ko01003,ko01005	transferase
PHIIFDDP_01862	5.04e-154	yvyE	3.4.13.9	-	S	ko:K01271	-	ko00000,ko01000,ko01002	YigZ family
PHIIFDDP_01863	4.46e-313	comFA	-	-	L	ko:K02240	-	ko00000,ko00002,ko02044	Helicase C-terminal domain protein
PHIIFDDP_01864	2.41e-171	comFC	-	-	S	ko:K02242	-	ko00000,ko00002,ko02044	Competence protein
PHIIFDDP_01865	2.68e-123	hpf	-	-	J	ko:K05808	-	ko00000,ko03009	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
PHIIFDDP_01866	0.0	secA	-	-	U	ko:K03070	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
PHIIFDDP_01867	3.19e-238	prfB	-	-	J	ko:K02836	-	ko00000,ko03012	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
PHIIFDDP_01868	1.68e-26	-	-	-	-	-	-	-	-
PHIIFDDP_01869	3.54e-230	hprK	-	-	F	ko:K06023	-	ko00000,ko01000	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
PHIIFDDP_01870	1.21e-204	lgt	-	-	M	ko:K13292	-	ko00000,ko01000	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
PHIIFDDP_01871	6.69e-239	gpsA	1.1.1.94	-	I	ko:K00057	ko00564,ko01110,map00564,map01110	ko00000,ko00001,ko01000	Glycerol-3-phosphate dehydrogenase
PHIIFDDP_01872	3.42e-232	trxB	1.8.1.9	-	C	ko:K00384	ko00450,map00450	ko00000,ko00001,ko01000	Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
PHIIFDDP_01873	0.0	pgm	5.4.2.2	-	G	ko:K01835	ko00010,ko00030,ko00052,ko00230,ko00500,ko00520,ko00521,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00052,map00230,map00500,map00520,map00521,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
PHIIFDDP_01874	0.0	uvrB	-	-	L	ko:K03702	ko03420,map03420	ko00000,ko00001,ko03400	damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
PHIIFDDP_01875	0.0	uvrA	-	-	L	ko:K03701	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
PHIIFDDP_01876	1.88e-118	-	-	-	S	-	-	-	Short repeat of unknown function (DUF308)
PHIIFDDP_01877	2.44e-211	yvcJ	-	-	S	ko:K06958	-	ko00000,ko03019	Displays ATPase and GTPase activities
PHIIFDDP_01878	1.61e-250	yvcK	-	-	S	-	-	-	Required for morphogenesis under gluconeogenic growth conditions
PHIIFDDP_01879	8.59e-221	whiA	-	-	K	ko:K09762	-	ko00000	May be required for sporulation
PHIIFDDP_01880	1.16e-128	clpP	3.4.21.92	-	O	ko:K01358	ko04112,ko04212,map04112,map04212	ko00000,ko00001,ko01000,ko01002	Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
PHIIFDDP_01881	0.0	-	-	-	S	-	-	-	SH3-like domain
PHIIFDDP_01882	3.16e-144	ybbL	-	-	S	ko:K02068	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PHIIFDDP_01883	4.76e-168	ybbM	-	-	S	ko:K02069	-	ko00000,ko00002,ko02000	Uncharacterised protein family (UPF0014)
PHIIFDDP_01884	3.92e-123	-	-	-	S	-	-	-	Domain of unknown function (DUF4811)
PHIIFDDP_01885	0.0	ycnB	-	-	U	-	-	-	Belongs to the major facilitator superfamily
PHIIFDDP_01886	1.32e-101	-	-	-	K	-	-	-	MerR HTH family regulatory protein
PHIIFDDP_01887	2.3e-184	-	-	-	S	-	-	-	Cysteine-rich secretory protein family
PHIIFDDP_01888	0.0	ycaM	-	-	E	-	-	-	amino acid
PHIIFDDP_01889	0.0	-	-	-	-	-	-	-	-
PHIIFDDP_01891	1.35e-240	cggR	-	-	K	ko:K05311	-	ko00000,ko03000	Putative sugar-binding domain
PHIIFDDP_01892	2.86e-244	gap	1.2.1.12	-	G	ko:K00134	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
PHIIFDDP_01893	2.86e-286	pgk	2.7.2.3	-	F	ko:K00927	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the phosphoglycerate kinase family
PHIIFDDP_01894	5.46e-183	tpiA	5.3.1.1	-	G	ko:K01803	ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
PHIIFDDP_01895	3.07e-124	-	-	-	-	-	-	-	-
PHIIFDDP_01896	1.7e-201	ycsE	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
PHIIFDDP_01897	1.64e-174	ung	3.2.2.27	-	L	ko:K03648	ko03410,ko05340,map03410,map05340	ko00000,ko00001,ko01000,ko03400	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
PHIIFDDP_01898	4.68e-234	pta	2.3.1.8, 3.6.3.21	-	C	ko:K00625,ko:K02028	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000,ko02000	phosphate acetyltransferase
PHIIFDDP_01899	5.86e-114	ydiB	-	-	O	ko:K06925	-	ko00000,ko03016	Hydrolase, P-loop family
PHIIFDDP_01900	1.51e-127	dnaQ	2.7.7.7	-	L	ko:K02342	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III
PHIIFDDP_01901	4.91e-209	murB	1.3.1.98	-	M	ko:K00075	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation
PHIIFDDP_01902	1.25e-263	potA	3.6.3.30, 3.6.3.31	-	P	ko:K02010,ko:K11072	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
PHIIFDDP_01903	2.16e-173	potB	-	-	P	ko:K11071	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
PHIIFDDP_01904	3.69e-170	potC	-	-	P	ko:K11070	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
PHIIFDDP_01905	8.14e-265	potD	-	-	P	ko:K11069	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
PHIIFDDP_01906	2.13e-194	dacA	2.7.7.85	-	S	ko:K18672	-	ko00000,ko01000	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
PHIIFDDP_01907	3.93e-221	ybbR	-	-	S	-	-	-	YbbR-like protein
PHIIFDDP_01908	0.0	glmM	5.4.2.10	-	G	ko:K03431	ko00520,ko01100,ko01130,map00520,map01100,map01130	ko00000,ko00001,ko01000	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
PHIIFDDP_01909	5.66e-190	-	-	-	S	-	-	-	hydrolase
PHIIFDDP_01910	3.23e-98	copY	-	-	K	ko:K02171	ko01501,map01501	ko00000,ko00001,ko00002,ko01504,ko03000	Penicillinase repressor
PHIIFDDP_01911	2e-153	-	-	-	-	-	-	-	-
PHIIFDDP_01912	8.81e-112	ptpA	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
PHIIFDDP_01913	1.59e-265	glxK	2.7.1.165	-	G	ko:K00865	ko00260,ko00561,ko00630,ko01100,ko01120,ko01130,map00260,map00561,map00630,map01100,map01120,map01130	ko00000,ko00001,ko01000	Belongs to the glycerate kinase type-1 family
PHIIFDDP_01914	5.06e-196	bglG5	-	-	K	ko:K03488	-	ko00000,ko03000	CAT RNA binding domain
PHIIFDDP_01915	0.0	pts33BCA	-	-	G	ko:K02755,ko:K02756,ko:K02757	ko02060,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
PHIIFDDP_01916	0.0	-	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
PHIIFDDP_01917	2.7e-231	ybcH	-	-	D	ko:K06889	-	ko00000	Alpha beta
PHIIFDDP_01918	0.0	-	-	-	E	-	-	-	Amino acid permease
PHIIFDDP_01920	4.8e-38	rpsN	-	-	J	ko:K02954	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PHIIFDDP_01921	2.34e-141	ylbE	-	-	GM	-	-	-	NAD(P)H-binding
PHIIFDDP_01922	3.31e-120	-	-	-	S	-	-	-	VanZ like family
PHIIFDDP_01923	5.65e-171	yebC	-	-	K	-	-	-	Transcriptional regulatory protein
PHIIFDDP_01924	2.05e-230	comGA	-	-	NU	ko:K02243	-	ko00000,ko00002,ko02044	Type II IV secretion system protein
PHIIFDDP_01925	5.15e-224	comGB	-	-	NU	ko:K02244	-	ko00000,ko00002,ko02044	type II secretion system
PHIIFDDP_01926	7.88e-63	comGC	-	-	U	ko:K02245	-	ko00000,ko00002,ko02044	competence protein ComGC
PHIIFDDP_01927	2.01e-91	-	-	-	-	ko:K02246	-	ko00000,ko00002,ko02044	-
PHIIFDDP_01928	1.38e-54	-	-	-	-	-	-	-	-
PHIIFDDP_01929	1.94e-100	-	-	-	U	ko:K02248	-	ko00000,ko00002,ko02044	Putative Competence protein ComGF
PHIIFDDP_01930	3.69e-30	-	-	-	-	-	-	-	-
PHIIFDDP_01931	4.37e-241	ytxK	2.1.1.72	-	L	ko:K00571	-	ko00000,ko01000,ko02048	N-6 DNA Methylase
PHIIFDDP_01932	1.07e-281	ackA	2.7.2.1	-	F	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PHIIFDDP_01934	2.87e-18	-	-	-	M	-	-	-	Protein of unknown function (DUF3737)
PHIIFDDP_01935	1.51e-115	-	-	-	M	-	-	-	Protein of unknown function (DUF3737)
PHIIFDDP_01936	3.32e-286	patB	4.4.1.8	-	E	ko:K14155	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko01000,ko01007	Aminotransferase, class I
PHIIFDDP_01937	4.73e-243	manA	5.3.1.8	-	G	ko:K01809	ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	mannose-6-phosphate isomerase
PHIIFDDP_01938	9.01e-90	-	-	-	S	-	-	-	SdpI/YhfL protein family
PHIIFDDP_01939	2.8e-170	-	-	-	K	-	-	-	Transcriptional regulatory protein, C terminal
PHIIFDDP_01940	0.0	yclK	-	-	T	-	-	-	Histidine kinase
PHIIFDDP_01941	0.0	ltaS	2.7.8.20	-	M	ko:K19005	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
PHIIFDDP_01942	5.3e-137	vanZ	-	-	V	-	-	-	VanZ like family
PHIIFDDP_01943	0.0	pgi	5.3.1.9	-	G	ko:K01810	ko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the GPI family
PHIIFDDP_01944	1.39e-275	-	-	-	EGP	-	-	-	Major Facilitator
PHIIFDDP_01945	3.24e-249	ampC	-	-	V	-	-	-	Beta-lactamase
PHIIFDDP_01948	0.0	murE2	6.3.2.13	-	M	ko:K01928	ko00300,ko00550,map00300,map00550	ko00000,ko00001,ko01000,ko01011	Domain of unknown function (DUF1727)
PHIIFDDP_01949	4.06e-145	tdk	2.7.1.21	-	F	ko:K00857	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	thymidine kinase
PHIIFDDP_01950	6.6e-237	prfA	-	-	J	ko:K02835	-	ko00000,ko03012	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
PHIIFDDP_01951	1.51e-199	prmC	2.1.1.297	-	J	ko:K02493	-	ko00000,ko01000,ko03012	Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
PHIIFDDP_01952	1.86e-242	ywlC	2.7.7.87	-	J	ko:K07566	-	ko00000,ko01000,ko03009,ko03016	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
PHIIFDDP_01953	5.28e-146	upp	2.4.2.9	-	F	ko:K00761	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
PHIIFDDP_01954	4.44e-161	atpB	-	-	C	ko:K02108	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko03110	it plays a direct role in the translocation of protons across the membrane
PHIIFDDP_01955	4.36e-39	atpE	-	-	C	ko:K02110	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PHIIFDDP_01956	1.69e-86	atpF	-	-	C	ko:K02109	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
PHIIFDDP_01957	2.67e-119	atpH	-	-	C	ko:K02113	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PHIIFDDP_01958	0.0	atpA	3.6.3.14	-	C	ko:K02111	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko01000	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
PHIIFDDP_01959	4.54e-216	atpG	-	-	C	ko:K02115	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
PHIIFDDP_01960	0.0	atpD	3.6.3.14	-	C	ko:K02112	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko01000	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
PHIIFDDP_01961	1.36e-90	atpC	-	-	C	ko:K02114	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Produces ATP from ADP in the presence of a proton gradient across the membrane
PHIIFDDP_01962	1.26e-42	-	-	-	S	-	-	-	Protein of unknown function (DUF1146)
PHIIFDDP_01963	8.31e-228	mbl	-	-	D	ko:K03569	-	ko00000,ko02048,ko03036,ko04812	Cell shape determining protein MreB Mrl
PHIIFDDP_01964	5.54e-69	ytjA	-	-	S	ko:K08998	-	ko00000	Could be involved in insertion of integral membrane proteins into the membrane
PHIIFDDP_01965	1.26e-46	-	-	-	S	-	-	-	Protein of unknown function (DUF2969)
PHIIFDDP_01966	2.05e-276	rodA	-	-	D	ko:K05837	-	ko00000,ko03036	Belongs to the SEDS family
PHIIFDDP_01967	9.45e-104	uspA	-	-	T	-	-	-	universal stress protein
PHIIFDDP_01968	3.87e-56	-	-	-	-	-	-	-	-
PHIIFDDP_01969	1.41e-300	rarA	-	-	L	ko:K07478	-	ko00000	recombination factor protein RarA
PHIIFDDP_01970	9.44e-109	-	-	-	S	-	-	-	Protein of unknown function (DUF1694)
PHIIFDDP_01971	3.07e-142	rpsD	-	-	J	ko:K02986	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
PHIIFDDP_01972	0.0	ezrA	-	-	D	ko:K06286	-	ko00000,ko03036	modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
PHIIFDDP_01973	9.02e-275	iscS2	2.8.1.7	-	E	ko:K04487	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko02048,ko03016,ko03029	Aminotransferase class V
PHIIFDDP_01974	2.99e-289	thiI	2.8.1.4	-	H	ko:K03151	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko03016	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
PHIIFDDP_01976	4.01e-103	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
PHIIFDDP_01977	2.38e-81	-	-	-	-	-	-	-	-
PHIIFDDP_01978	2.45e-42	-	-	-	S	-	-	-	Protein of unknown function (DUF4065)
PHIIFDDP_01980	1.31e-15	-	-	-	-	-	-	-	-
PHIIFDDP_01983	1.53e-05	rnhA	3.1.26.4	-	L	ko:K03469	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PHIIFDDP_01984	6.14e-143	-	-	-	-	-	-	-	-
PHIIFDDP_01985	1.74e-171	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
PHIIFDDP_01986	3.29e-178	-	-	-	-	-	-	-	-
PHIIFDDP_01987	2.44e-231	-	3.6.4.12	-	K	ko:K03655	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Putative ATP-dependent DNA helicase recG C-terminal
PHIIFDDP_01988	3.62e-154	rsuA	5.4.99.19	-	J	ko:K06183	-	ko00000,ko01000,ko03009	Belongs to the pseudouridine synthase RsuA family
PHIIFDDP_01989	1.89e-48	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
PHIIFDDP_01990	5.46e-89	-	-	-	S	-	-	-	GtrA-like protein
PHIIFDDP_01991	2.11e-220	yfdH	-	GT2	M	ko:K12999	-	ko00000,ko01000,ko01003,ko01005	Glycosyltransferase, group 2 family protein
PHIIFDDP_01992	3.89e-122	-	-	-	S	-	-	-	Protein of unknown function (DUF3990)
PHIIFDDP_01993	2.09e-59	-	-	-	-	-	-	-	-
PHIIFDDP_01994	3.41e-12	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
PHIIFDDP_01995	0.0	yoaB	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	P-type ATPase
PHIIFDDP_01996	8.58e-220	-	-	-	-	-	-	-	-
PHIIFDDP_01997	2.98e-213	-	-	-	K	-	-	-	Helix-turn-helix domain
PHIIFDDP_01998	5.33e-243	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
PHIIFDDP_02001	1.92e-106	ytsP	1.8.4.14	-	T	ko:K08968	ko00270,map00270	ko00000,ko00001,ko01000	GAF domain-containing protein
PHIIFDDP_02002	0.0	clpC	-	-	O	ko:K03696	ko01100,map01100	ko00000,ko03110	Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
PHIIFDDP_02003	0.0	rpoB	2.7.7.6	-	K	ko:K03043	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PHIIFDDP_02004	0.0	rpoC	2.7.7.6	-	K	ko:K03046	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PHIIFDDP_02005	7.71e-157	comC	3.4.23.43	-	NOU	ko:K02236	-	ko00000,ko00002,ko01000,ko02044	Bacterial Peptidase A24 N-terminal domain
PHIIFDDP_02006	1.47e-91	rpsL	-	-	J	ko:K02950	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
PHIIFDDP_02007	1.39e-106	rpsG	-	-	J	ko:K02992	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
PHIIFDDP_02008	0.0	fusA	-	-	J	ko:K02355	-	ko00000,ko03012,ko03029	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
PHIIFDDP_02009	6.34e-66	rpsJ	-	-	J	ko:K02946	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Involved in the binding of tRNA to the ribosomes
PHIIFDDP_02010	6.64e-146	rplC	-	-	J	ko:K02906	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
PHIIFDDP_02011	4.68e-138	rplD	-	-	J	ko:K02926	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the polypeptide exit tunnel
PHIIFDDP_02012	1.14e-63	rplW	-	-	J	ko:K02892	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
PHIIFDDP_02013	4.01e-198	rplB	-	-	J	ko:K02886	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
PHIIFDDP_02014	1.14e-62	rpsS	-	-	J	ko:K02965	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
PHIIFDDP_02015	9.07e-73	rplV	-	-	J	ko:K02890	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
PHIIFDDP_02016	8.7e-157	rpsC	-	-	J	ko:K02982	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
PHIIFDDP_02017	1.66e-100	rplP	-	-	J	ko:K02878	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
PHIIFDDP_02018	1.45e-34	rpmC	-	-	J	ko:K02904	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uL29 family
PHIIFDDP_02019	1.56e-55	rpsQ	-	-	J	ko:K02961	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
PHIIFDDP_02020	3.62e-79	rplN	-	-	J	ko:K02874	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
PHIIFDDP_02021	3.03e-44	rplX	-	-	J	ko:K02895	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
PHIIFDDP_02022	1.23e-123	rplE	-	-	J	ko:K02931	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
PHIIFDDP_02023	1e-39	rpsN	-	-	J	ko:K02954	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PHIIFDDP_02024	7.94e-90	rpsH	-	-	J	ko:K02994	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
PHIIFDDP_02025	7.18e-121	rplF	-	-	J	ko:K02933	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
PHIIFDDP_02026	4.84e-73	rplR	-	-	J	ko:K02881	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
PHIIFDDP_02027	3.73e-110	rpsE	-	-	J	ko:K02988	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
PHIIFDDP_02028	2.22e-34	rpmD	-	-	J	ko:K02907	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L30
PHIIFDDP_02029	4.95e-93	rplO	-	-	J	ko:K02876	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to the 23S rRNA
PHIIFDDP_02030	1.25e-301	secY	-	-	U	ko:K03076	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
PHIIFDDP_02031	3.7e-155	adk	2.7.4.3	-	F	ko:K00939	ko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
PHIIFDDP_02032	3.13e-46	infA	-	-	J	ko:K02518	-	ko00000,ko03012	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
PHIIFDDP_02033	1.89e-21	rpmJ	-	-	J	ko:K02919	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL36 family
PHIIFDDP_02034	2.07e-73	rpsM	-	-	J	ko:K02952	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
PHIIFDDP_02035	3.82e-82	rpsK	-	-	J	ko:K02948	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
PHIIFDDP_02036	3.62e-218	rpoA	2.7.7.6	-	K	ko:K03040	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PHIIFDDP_02037	2.23e-80	rplQ	-	-	J	ko:K02879	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L17
PHIIFDDP_02038	1.02e-198	ecfA1	-	-	P	ko:K16786	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PHIIFDDP_02039	2.73e-202	ecfA2	-	-	P	ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PHIIFDDP_02040	1.13e-177	ecfT	-	-	U	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PHIIFDDP_02041	5.08e-193	truA	5.4.99.12	-	J	ko:K06173	-	ko00000,ko01000,ko03016	Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
PHIIFDDP_02042	3.22e-103	rplM	-	-	J	ko:K02871	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
PHIIFDDP_02043	1.67e-86	rpsI	-	-	J	ko:K02996	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uS9 family
PHIIFDDP_02044	1.71e-206	-	-	-	M	-	-	-	Belongs to the glycosyl hydrolase 28 family
PHIIFDDP_02045	6.48e-104	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
PHIIFDDP_02046	1.66e-137	-	3.5.1.124	-	S	ko:K03152	-	ko00000,ko01000,ko01002	DJ-1/PfpI family
PHIIFDDP_02047	3.84e-153	-	3.8.1.2	-	S	ko:K01560	ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120	ko00000,ko00001,ko01000	Haloacid dehalogenase-like hydrolase
PHIIFDDP_02048	2.11e-171	-	-	-	S	ko:K07090	-	ko00000	membrane transporter protein
PHIIFDDP_02049	2.7e-161	-	-	-	G	-	-	-	Belongs to the phosphoglycerate mutase family
PHIIFDDP_02050	5.93e-206	-	-	-	P	ko:K16264	-	ko00000,ko02000	cation diffusion facilitator family transporter
PHIIFDDP_02051	2.42e-33	-	-	-	-	-	-	-	-
PHIIFDDP_02052	4.87e-164	gpmA1	5.4.2.11	-	G	ko:K01834	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PHIIFDDP_02053	1.99e-235	-	-	-	S	-	-	-	AAA domain
PHIIFDDP_02054	0.0	pepC	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	Peptidase C1-like family
PHIIFDDP_02055	1.84e-68	-	-	-	-	-	-	-	-
PHIIFDDP_02056	5.22e-131	dut	3.6.1.23	-	F	ko:K01520	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	dUTP diphosphatase
PHIIFDDP_02057	0.0	radA	-	-	O	ko:K04485	-	ko00000,ko03400	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
PHIIFDDP_02058	0.0	gltX	6.1.1.24	-	J	ko:K09698	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
PHIIFDDP_02059	0.0	cysS	6.1.1.16	-	J	ko:K01883	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-I aminoacyl-tRNA synthetase family
PHIIFDDP_02060	8.55e-99	mrnC	-	-	J	ko:K11145	-	ko00000,ko01000,ko03009	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
PHIIFDDP_02061	2.69e-178	trmH	2.1.1.185	-	J	ko:K03218	-	ko00000,ko01000,ko03009	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PHIIFDDP_02062	3.81e-123	comX	-	-	K	ko:K03088,ko:K03091,ko:K12296	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko03000,ko03021	Belongs to the sigma-70 factor family
PHIIFDDP_02063	1.19e-45	-	-	-	-	-	-	-	-
PHIIFDDP_02064	0.0	gntK	2.7.1.12	-	G	ko:K00851	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko01000	Belongs to the FGGY kinase family
PHIIFDDP_02065	0.0	dxs	2.2.1.7	-	H	ko:K01662	ko00730,ko00900,ko01100,ko01110,ko01130,map00730,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
PHIIFDDP_02066	3.73e-33	secE	-	-	U	ko:K03073	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
PHIIFDDP_02067	3.01e-131	nusG	-	-	K	ko:K02601	-	ko00000,ko03009,ko03021	Participates in transcription elongation, termination and antitermination
PHIIFDDP_02068	2.69e-90	rplK	-	-	J	ko:K02867	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
PHIIFDDP_02069	1.05e-160	rplA	-	-	J	ko:K02863	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
PHIIFDDP_02070	9.47e-202	pstS	-	-	P	ko:K02040	ko02010,ko02020,ko05152,map02010,map02020,map05152	ko00000,ko00001,ko00002,ko02000	Phosphate
PHIIFDDP_02071	1.19e-212	pstC	-	-	P	ko:K02037	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	probably responsible for the translocation of the substrate across the membrane
PHIIFDDP_02072	1.82e-198	pstA	-	-	P	ko:K02038	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Phosphate transport system permease protein PstA
PHIIFDDP_02073	5.24e-187	pstB2	3.6.3.27	-	P	ko:K02036	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PHIIFDDP_02074	3.28e-179	pstB1	3.6.3.27	-	P	ko:K02036	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PHIIFDDP_02075	8.29e-151	phoU	-	-	P	ko:K02039	-	ko00000	Plays a role in the regulation of phosphate uptake
PHIIFDDP_02076	2.07e-80	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
PHIIFDDP_02078	3.72e-111	rplJ	-	-	J	ko:K02864	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
PHIIFDDP_02079	1.61e-72	rplL	-	-	J	ko:K02935	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
PHIIFDDP_02080	1.13e-189	-	2.1.1.172	-	J	ko:K00564,ko:K10716	-	ko00000,ko01000,ko02000,ko03009	Ion channel
PHIIFDDP_02081	5.31e-149	rsmC	2.1.1.172	-	J	ko:K00564	-	ko00000,ko01000,ko03009	Methyltransferase
PHIIFDDP_02082	6.15e-36	-	-	-	-	-	-	-	-
PHIIFDDP_02083	1.08e-117	tadA	3.5.4.33	-	F	ko:K11991	-	ko00000,ko01000,ko03016	Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
PHIIFDDP_02084	0.0	dnaX	2.7.7.7	-	L	ko:K02343	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PHIIFDDP_02085	1.19e-46	-	-	-	M	-	-	-	lipopolysaccharide 3-alpha-galactosyltransferase activity
PHIIFDDP_02086	1.55e-68	yaaK	-	-	S	ko:K09747	-	ko00000	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
PHIIFDDP_02087	9.21e-142	recR	-	-	L	ko:K06187	ko03440,map03440	ko00000,ko00001,ko03400	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
PHIIFDDP_02088	1.18e-46	-	-	-	S	-	-	-	Protein of unknown function (DUF2508)
PHIIFDDP_02089	1.15e-146	tmk	2.7.4.9	-	F	ko:K00943	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
PHIIFDDP_02090	1.58e-70	yaaQ	-	-	S	-	-	-	Cyclic-di-AMP receptor
PHIIFDDP_02091	1.45e-199	holB	2.7.7.7	-	L	ko:K02341	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III
PHIIFDDP_02092	1.4e-80	yabA	-	-	L	-	-	-	Involved in initiation control of chromosome replication
PHIIFDDP_02093	1.84e-201	rsmI	2.1.1.198	-	H	ko:K07056	-	ko00000,ko01000,ko03009	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
PHIIFDDP_02094	1.63e-180	fat	3.1.2.21	-	I	ko:K01071	ko00061,ko01100,map00061,map01100	ko00000,ko00001,ko01000,ko01004	Acyl-ACP thioesterase
PHIIFDDP_02095	4.5e-113	-	-	-	S	-	-	-	ECF transporter, substrate-specific component
PHIIFDDP_02096	6.59e-171	yeaZ	2.3.1.234	-	O	ko:K01409,ko:K14742	-	ko00000,ko01000,ko03016	Universal bacterial protein YeaZ
PHIIFDDP_02097	3.93e-125	rimI	2.3.1.128	-	K	ko:K03789	-	ko00000,ko01000,ko03009	Ribosomal-protein-alanine acetyltransferase
PHIIFDDP_02098	1.61e-251	tsaD	2.3.1.234	-	J	ko:K01409	-	ko00000,ko01000,ko03016	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction