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ORF_ID	e_value	Gene_name	EC_number	CAZy	COGs	KEGG_ko	KEGG_Pathway	BRITE	Description
GGJMDCOG_00001	9.14e-317	dnaA	-	-	L	ko:K02313	ko02020,ko04112,map02020,map04112	ko00000,ko00001,ko03032,ko03036	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
GGJMDCOG_00002	8.11e-245	dnaN	2.7.7.7	-	L	ko:K02338	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
GGJMDCOG_00003	1.13e-48	yaaA	-	-	S	ko:K14761	-	ko00000,ko03009	S4 domain protein YaaA
GGJMDCOG_00004	4.22e-267	recF	-	-	L	ko:K03629	ko03440,map03440	ko00000,ko00001,ko03400	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
GGJMDCOG_00005	0.0	gyrB	5.99.1.3	-	L	ko:K02470	-	ko00000,ko01000,ko03032,ko03400	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
GGJMDCOG_00006	0.0	gyrA	5.99.1.3	-	L	ko:K02469	-	ko00000,ko01000,ko03032,ko03400	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
GGJMDCOG_00007	6.72e-66	rpsF	-	-	J	ko:K02990	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Binds together with S18 to 16S ribosomal RNA
GGJMDCOG_00008	4.83e-104	ssb	-	-	L	ko:K03111	ko03030,ko03430,ko03440,map03030,map03430,map03440	ko00000,ko00001,ko03029,ko03032,ko03400	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
GGJMDCOG_00009	1.89e-47	rpsR	-	-	J	ko:K02963	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
GGJMDCOG_00010	0.0	yybT	-	-	T	-	-	-	signaling protein consisting of a modified GGDEF domain and a DHH domain
GGJMDCOG_00011	3.87e-97	rplI	-	-	J	ko:K02939	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to the 23S rRNA
GGJMDCOG_00012	0.0	dnaB	3.6.4.12	-	L	ko:K02314	ko03030,ko04112,map03030,map04112	ko00000,ko00001,ko01000,ko03032	Participates in initiation and elongation during chromosome replication
GGJMDCOG_00013	5.56e-217	phnD	-	-	P	ko:K02044	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter, phosphonate, periplasmic substrate-binding protein
GGJMDCOG_00014	2.26e-215	degV1	-	-	S	-	-	-	DegV family
GGJMDCOG_00015	1.23e-170	-	-	-	V	-	-	-	ABC transporter transmembrane region
GGJMDCOG_00016	4.76e-213	scrK	2.7.1.4	-	GK	ko:K00847	ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100	ko00000,ko00001,ko01000	ROK family
GGJMDCOG_00017	3.81e-18	-	-	-	S	-	-	-	CsbD-like
GGJMDCOG_00018	2.26e-31	-	-	-	S	-	-	-	Transglycosylase associated protein
GGJMDCOG_00019	1.37e-287	-	-	-	I	-	-	-	Protein of unknown function (DUF2974)
GGJMDCOG_00020	3.92e-153	-	-	-	S	ko:K07507	-	ko00000,ko02000	MgtC family
GGJMDCOG_00024	0.0	-	-	-	S	-	-	-	Fibronectin type III domain
GGJMDCOG_00025	7.03e-307	tyrS	6.1.1.1	-	J	ko:K01866	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
GGJMDCOG_00027	0.0	pepC2	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	aminopeptidase
GGJMDCOG_00028	1.77e-157	ypgQ	-	-	S	ko:K06950	-	ko00000	Metal dependent phosphohydrolases with conserved 'HD' motif.
GGJMDCOG_00029	0.0	oppA	-	-	E	ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
GGJMDCOG_00030	0.0	oppA	-	-	E	ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
GGJMDCOG_00032	1.13e-35	-	-	-	K	ko:K07729	-	ko00000,ko03000	Helix-turn-helix XRE-family like proteins
GGJMDCOG_00033	0.000868	-	-	-	-	-	-	-	-
GGJMDCOG_00034	2.04e-277	metE	2.1.1.14	-	E	ko:K00549	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	methionine synthase, vitamin-B12 independent
GGJMDCOG_00035	6.6e-115	luxS	4.4.1.21	-	H	ko:K07173	ko00270,ko01100,ko01230,ko02024,ko02026,ko05111,map00270,map01100,map01230,map02024,map02026,map05111	ko00000,ko00001,ko00002,ko01000	Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
GGJMDCOG_00036	0.0	lctP	-	-	C	ko:K03303	-	ko00000,ko02000	L-lactate permease
GGJMDCOG_00037	1.59e-172	znuB	-	-	U	ko:K02075,ko:K09816	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC 3 transport family
GGJMDCOG_00038	1.63e-152	adcC	-	-	P	ko:K02074,ko:K09817,ko:K11710	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter
GGJMDCOG_00039	9.9e-209	-	-	-	P	ko:K02077	-	ko00000,ko00002,ko02000	Belongs to the bacterial solute-binding protein 9 family
GGJMDCOG_00040	4.47e-56	-	-	-	K	ko:K21903	-	ko00000,ko03000	helix_turn_helix, Arsenical Resistance Operon Repressor
GGJMDCOG_00041	0.0	fruA	2.7.1.202	-	GT	ko:K02768,ko:K02769,ko:K02770	ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphotransferase System
GGJMDCOG_00042	2.18e-215	pfkB	2.7.1.56	-	H	ko:K00882	ko00051,map00051	ko00000,ko00001,ko01000	Belongs to the carbohydrate kinase PfkB family. LacC subfamily
GGJMDCOG_00043	3.14e-175	fruR	-	-	K	ko:K03436	-	ko00000,ko03000	DeoR C terminal sensor domain
GGJMDCOG_00044	6.39e-279	natB	-	-	CP	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 family transporter protein
GGJMDCOG_00045	3.09e-212	natA	-	-	S	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
GGJMDCOG_00046	3.41e-88	-	-	-	-	-	-	-	-
GGJMDCOG_00047	2.52e-32	-	-	-	-	-	-	-	-
GGJMDCOG_00048	6.32e-42	-	-	-	K	ko:K07727	-	ko00000,ko03000	Transcriptional regulator
GGJMDCOG_00049	4.74e-107	-	-	-	-	-	-	-	-
GGJMDCOG_00050	7.87e-30	-	-	-	-	-	-	-	-
GGJMDCOG_00053	5.02e-180	blpT	-	-	-	-	-	-	-
GGJMDCOG_00054	7.86e-138	mesE	-	-	M	ko:K12293,ko:K20345	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko02000	Transport protein ComB
GGJMDCOG_00055	1.85e-141	comA	-	-	V	ko:K06147,ko:K06148,ko:K12292,ko:K20344	ko02010,ko02020,ko02024,map02010,map02020,map02024	ko00000,ko00001,ko01000,ko02000	ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
GGJMDCOG_00056	0.0	comA	-	-	V	ko:K06147,ko:K06148,ko:K12292,ko:K20344	ko02010,ko02020,ko02024,map02010,map02020,map02024	ko00000,ko00001,ko01000,ko02000	ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
GGJMDCOG_00057	2.08e-164	-	-	-	K	ko:K07707	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko02022	LytTr DNA-binding domain
GGJMDCOG_00058	1.04e-94	-	2.7.13.3	-	T	ko:K07706	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	GHKL domain
GGJMDCOG_00059	6.42e-73	-	2.7.13.3	-	T	ko:K07706	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	GHKL domain
GGJMDCOG_00060	1.89e-23	-	-	-	-	-	-	-	-
GGJMDCOG_00061	0.0	-	-	-	S	ko:K06921	-	ko00000	Archaea bacterial proteins of unknown function
GGJMDCOG_00062	0.0	agl	3.2.1.20	GH31	G	ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 31 family
GGJMDCOG_00063	0.0	glcD	1.1.3.15	-	C	ko:K00104	ko00630,ko01100,ko01110,ko01120,ko01130,map00630,map01100,map01110,map01120,map01130	ko00000,ko00001,ko01000	FAD linked oxidases, C-terminal domain
GGJMDCOG_00064	4.48e-34	-	-	-	-	-	-	-	-
GGJMDCOG_00065	1.07e-35	-	-	-	-	-	-	-	-
GGJMDCOG_00066	1.95e-45	-	-	-	-	-	-	-	-
GGJMDCOG_00067	6.94e-70	-	-	-	S	-	-	-	Enterocin A Immunity
GGJMDCOG_00068	7.79e-186	racD	5.1.1.13	-	M	ko:K01779	ko00250,ko01054,map00250,map01054	ko00000,ko00001,ko01000	Belongs to the aspartate glutamate racemases family
GGJMDCOG_00069	0.0	murE	6.3.2.13, 6.3.2.7	-	M	ko:K01928,ko:K05362	ko00300,ko00550,ko01100,map00300,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
GGJMDCOG_00070	9.28e-271	-	-	-	T	-	-	-	His Kinase A (phosphoacceptor) domain
GGJMDCOG_00071	8.32e-157	vanR	-	-	K	-	-	-	response regulator
GGJMDCOG_00073	0.0	ndvA	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter
GGJMDCOG_00074	1.68e-179	-	-	-	V	ko:K06147,ko:K06148	-	ko00000,ko02000	ABC transporter, ATP-binding protein
GGJMDCOG_00075	1.22e-190	-	-	-	V	ko:K06147,ko:K06148	-	ko00000,ko02000	ABC transporter, ATP-binding protein
GGJMDCOG_00076	3.93e-176	-	-	-	S	-	-	-	Protein of unknown function (DUF1129)
GGJMDCOG_00077	6.88e-257	ychF	-	-	J	ko:K06942	-	ko00000,ko03009	ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
GGJMDCOG_00078	1.1e-59	yyzM	-	-	S	-	-	-	Bacterial protein of unknown function (DUF951)
GGJMDCOG_00079	4.28e-197	spo0J	-	-	K	ko:K03497	-	ko00000,ko03000,ko03036,ko04812	Belongs to the ParB family
GGJMDCOG_00080	4.99e-178	soj	-	-	D	ko:K03496	-	ko00000,ko03036,ko04812	Sporulation initiation inhibitor
GGJMDCOG_00081	5.86e-191	noc	-	-	K	ko:K03497	-	ko00000,ko03000,ko03036,ko04812	Belongs to the ParB family
GGJMDCOG_00082	3.66e-166	rsmG	2.1.1.170	-	J	ko:K03501	-	ko00000,ko01000,ko03009,ko03036	Specifically methylates the N7 position of a guanine in 16S rRNA
GGJMDCOG_00083	2.12e-86	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
GGJMDCOG_00084	2.99e-75	cvpA	-	-	S	-	-	-	Colicin V production protein
GGJMDCOG_00086	5.24e-230	apbE	2.7.1.180	-	H	ko:K03734	-	ko00000,ko01000	Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
GGJMDCOG_00087	9.48e-194	-	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Tyrosine phosphatase family
GGJMDCOG_00088	2.58e-126	azr	1.5.1.36	-	S	ko:K22394	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	NADPH-dependent FMN reductase
GGJMDCOG_00089	3.41e-125	azo1	1.5.1.36, 1.7.1.6	-	S	ko:K03206,ko:K19784,ko:K22393	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	NADPH-dependent FMN reductase
GGJMDCOG_00090	1.25e-143	-	-	-	K	-	-	-	WHG domain
GGJMDCOG_00091	2.63e-50	-	-	-	-	-	-	-	-
GGJMDCOG_00092	0.0	pepD4	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
GGJMDCOG_00093	2.12e-132	lolD	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
GGJMDCOG_00094	1.05e-233	yxeA	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter permease
GGJMDCOG_00095	1.45e-119	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
GGJMDCOG_00096	2.75e-143	-	-	-	G	-	-	-	phosphoglycerate mutase
GGJMDCOG_00097	3.99e-180	-	-	-	S	ko:K06889	-	ko00000	Alpha/beta hydrolase family
GGJMDCOG_00098	1.45e-183	XK27_08125	-	-	S	ko:K09861	-	ko00000	Belongs to the UPF0246 family
GGJMDCOG_00099	1.19e-29	-	-	-	-	-	-	-	-
GGJMDCOG_00100	7.91e-102	-	-	-	-	-	-	-	-
GGJMDCOG_00101	9.18e-202	-	-	-	C	-	-	-	Domain of unknown function (DUF4931)
GGJMDCOG_00102	2.94e-250	-	-	-	S	-	-	-	Putative peptidoglycan binding domain
GGJMDCOG_00103	2.61e-23	-	-	-	-	-	-	-	-
GGJMDCOG_00104	1.05e-119	-	-	-	S	-	-	-	membrane
GGJMDCOG_00105	5.3e-92	-	-	-	K	-	-	-	LytTr DNA-binding domain
GGJMDCOG_00106	6.93e-34	-	-	-	S	-	-	-	Sugar efflux transporter for intercellular exchange
GGJMDCOG_00107	0.0	dtpT	-	-	U	ko:K03305	-	ko00000	amino acid peptide transporter
GGJMDCOG_00108	0.0	pepN	3.4.11.2	-	E	ko:K01256	ko00480,ko01100,map00480,map01100	ko00000,ko00001,ko01000,ko01002	aminopeptidase
GGJMDCOG_00109	2.2e-79	lysM	-	-	M	-	-	-	LysM domain
GGJMDCOG_00110	7.62e-223	-	-	-	-	-	-	-	-
GGJMDCOG_00111	6.74e-212	mdtG2	-	-	EGP	ko:K08161	-	ko00000,ko02000	Transporter, major facilitator family protein
GGJMDCOG_00112	1.27e-58	mdtG2	-	-	EGP	ko:K08161	-	ko00000,ko02000	Transporter, major facilitator family protein
GGJMDCOG_00113	1.86e-114	ymdB	-	-	S	-	-	-	Macro domain protein
GGJMDCOG_00118	4.73e-84	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
GGJMDCOG_00119	1.39e-197	malG	-	-	P	ko:K15772	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
GGJMDCOG_00120	0.0	malF	-	-	P	ko:K15771	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
GGJMDCOG_00121	2.73e-282	-	-	-	G	ko:K15770	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding protein
GGJMDCOG_00122	2.85e-266	msmX	-	-	P	ko:K10112	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
GGJMDCOG_00123	7.7e-149	pgmB	5.4.2.6	-	S	ko:K01838	ko00500,map00500	ko00000,ko00001,ko01000	beta-phosphoglucomutase
GGJMDCOG_00124	0.0	mapA	2.4.1.8	GH65	G	ko:K00691	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	hydrolase, family 65, central catalytic
GGJMDCOG_00125	0.0	nplT	3.2.1.133, 3.2.1.135, 3.2.1.54	GH13	G	ko:K01208	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 13 family
GGJMDCOG_00126	0.0	malA1	3.2.1.10, 3.2.1.20	GH13,GH31	G	ko:K01182,ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Alpha amylase, catalytic domain
GGJMDCOG_00127	4.13e-99	XK27_04775	-	-	S	ko:K09155	-	ko00000	PAS domain
GGJMDCOG_00128	9.42e-261	ackA	2.7.2.1	-	F	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
GGJMDCOG_00129	9.04e-230	yvdE	-	-	K	-	-	-	helix_turn _helix lactose operon repressor
GGJMDCOG_00130	7.48e-188	-	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Tyrosine phosphatase family
GGJMDCOG_00131	0.0	glpK	2.7.1.30	-	F	ko:K00864	ko00561,ko01100,ko03320,ko04626,map00561,map01100,map03320,map04626	ko00000,ko00001,ko01000,ko04147	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
GGJMDCOG_00132	3.66e-186	thiD	2.7.1.49, 2.7.4.7	-	H	ko:K00941	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Phosphomethylpyrimidine kinase
GGJMDCOG_00133	1.74e-248	-	-	-	G	-	-	-	Transmembrane secretion effector
GGJMDCOG_00134	5.63e-171	-	-	-	V	-	-	-	ABC transporter transmembrane region
GGJMDCOG_00135	3.65e-285	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
GGJMDCOG_00136	1.83e-91	-	-	-	V	-	-	-	ABC transporter transmembrane region
GGJMDCOG_00137	6.69e-84	-	-	-	L	-	-	-	RelB antitoxin
GGJMDCOG_00138	1.51e-168	cobQ	-	-	S	ko:K07009	-	ko00000	glutamine amidotransferase
GGJMDCOG_00139	8.6e-108	-	-	-	M	-	-	-	NlpC/P60 family
GGJMDCOG_00142	1.02e-200	-	-	-	-	-	-	-	-
GGJMDCOG_00143	1.03e-07	-	-	-	-	-	-	-	-
GGJMDCOG_00144	5.51e-47	-	-	-	-	-	-	-	-
GGJMDCOG_00145	4.48e-206	-	-	-	EG	-	-	-	EamA-like transporter family
GGJMDCOG_00146	2.61e-208	-	-	-	EG	-	-	-	EamA-like transporter family
GGJMDCOG_00147	3.75e-178	yicL	-	-	EG	-	-	-	EamA-like transporter family
GGJMDCOG_00148	1.32e-137	-	-	-	-	-	-	-	-
GGJMDCOG_00149	9.07e-143	-	-	-	-	-	-	-	-
GGJMDCOG_00150	1.84e-238	-	-	-	S	-	-	-	DUF218 domain
GGJMDCOG_00151	0.0	yheS_2	-	-	S	ko:K18231,ko:K19349	ko02010,map02010	br01600,ko00000,ko00001,ko01504,ko02000	ATPases associated with a variety of cellular activities
GGJMDCOG_00152	6.77e-111	-	-	-	-	-	-	-	-
GGJMDCOG_00153	1.09e-74	-	-	-	-	-	-	-	-
GGJMDCOG_00154	7.26e-35	-	-	-	S	-	-	-	Protein conserved in bacteria
GGJMDCOG_00155	2.27e-71	-	-	-	S	-	-	-	protein encoded in hypervariable junctions of pilus gene clusters
GGJMDCOG_00156	1.01e-38	-	-	-	S	-	-	-	HicA toxin of bacterial toxin-antitoxin,
GGJMDCOG_00157	7.13e-313	purB	4.3.2.2	-	F	ko:K01756	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
GGJMDCOG_00158	0.0	purA	6.3.4.4	-	F	ko:K01939	ko00230,ko00250,ko01100,map00230,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
GGJMDCOG_00159	1.35e-238	guaC	1.7.1.7	-	F	ko:K00364	ko00230,map00230	ko00000,ko00001,ko01000	Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
GGJMDCOG_00162	1.84e-263	-	4.2.1.126	-	S	ko:K07106,ko:K09963	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Bacterial protein of unknown function (DUF871)
GGJMDCOG_00163	5.12e-242	asnA	6.3.1.1	-	F	ko:K01914	ko00250,ko00460,ko01100,ko01110,ko01230,map00250,map00460,map01100,map01110,map01230	ko00000,ko00001,ko01000	aspartate--ammonia ligase
GGJMDCOG_00164	6.45e-291	-	-	-	E	-	-	-	amino acid
GGJMDCOG_00165	6.65e-179	puuD	-	-	S	ko:K07010	-	ko00000,ko01002	peptidase C26
GGJMDCOG_00167	1.95e-221	-	-	-	V	-	-	-	HNH endonuclease
GGJMDCOG_00168	6.36e-173	-	-	-	S	-	-	-	PFAM Archaeal ATPase
GGJMDCOG_00169	5.27e-314	yifK	-	-	E	ko:K03293	-	ko00000	Amino acid permease
GGJMDCOG_00170	2.58e-310	aapA	-	-	E	ko:K03293,ko:K11737	-	ko00000,ko02000	Amino acid permease
GGJMDCOG_00171	5.08e-149	sipS3	3.4.21.89	-	U	ko:K03100	ko02024,ko03060,map02024,map03060	ko00000,ko00001,ko01000,ko01002	Belongs to the peptidase S26 family
GGJMDCOG_00172	0.0	clpE	-	-	O	ko:K03697,ko:K04086	-	ko00000,ko03110	AAA domain (Cdc48 subfamily)
GGJMDCOG_00173	7.86e-212	-	-	-	S	-	-	-	Alpha/beta hydrolase of unknown function (DUF915)
GGJMDCOG_00174	3.09e-304	pts13C	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
GGJMDCOG_00175	1.68e-161	-	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
GGJMDCOG_00176	0.0	ylbB	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter permease
GGJMDCOG_00177	1.96e-49	-	-	-	-	-	-	-	-
GGJMDCOG_00178	0.0	ytgP	-	-	S	ko:K03328	-	ko00000	Polysaccharide biosynthesis protein
GGJMDCOG_00179	1.34e-183	lysA2	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
GGJMDCOG_00180	2.5e-172	-	-	-	S	-	-	-	Protein of unknown function (DUF975)
GGJMDCOG_00181	1.97e-227	pbpX2	-	-	V	-	-	-	Beta-lactamase
GGJMDCOG_00182	6.8e-316	dltD	-	-	M	ko:K03740	ko01503,ko02020,ko05150,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01504	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
GGJMDCOG_00183	4.98e-48	dltC	6.1.1.13	-	J	ko:K14188	ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01000,ko01504	Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
GGJMDCOG_00184	2.95e-304	dltB	-	-	M	ko:K03739	ko01503,ko02020,ko05150,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01504	MBOAT, membrane-bound O-acyltransferase family
GGJMDCOG_00185	0.0	dltA	6.1.1.13	-	H	ko:K03367	ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01000,ko01504	Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
GGJMDCOG_00186	1.3e-26	-	-	-	S	-	-	-	D-Ala-teichoic acid biosynthesis protein
GGJMDCOG_00187	1.42e-58	-	-	-	-	-	-	-	-
GGJMDCOG_00188	5.11e-265	-	-	-	S	-	-	-	Membrane
GGJMDCOG_00189	3.41e-107	ykuL	-	-	S	-	-	-	(CBS) domain
GGJMDCOG_00190	0.0	cadA	-	-	P	-	-	-	P-type ATPase
GGJMDCOG_00191	5.71e-263	napA	-	-	P	-	-	-	Sodium/hydrogen exchanger family
GGJMDCOG_00192	2.49e-63	-	-	-	D	ko:K19159	-	ko00000,ko02048	Antitoxin component of a toxin-antitoxin (TA) module
GGJMDCOG_00193	1.68e-55	yoeB	-	-	S	ko:K19158	-	ko00000,ko01000,ko02048	YoeB-like toxin of bacterial type II toxin-antitoxin system
GGJMDCOG_00194	0.0	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC transporter transmembrane region
GGJMDCOG_00195	1.91e-200	mutR	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
GGJMDCOG_00196	1.05e-67	-	-	-	-	-	-	-	-
GGJMDCOG_00197	3.62e-202	-	-	-	EGP	-	-	-	Major facilitator Superfamily
GGJMDCOG_00198	8.6e-141	ywdE	-	-	K	ko:K20375	ko02024,map02024	ko00000,ko00001,ko03000	Transcriptional regulator
GGJMDCOG_00199	3.43e-155	-	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
GGJMDCOG_00200	5.14e-248	-	-	-	S	-	-	-	DUF218 domain
GGJMDCOG_00201	0.0	-	-	-	V	ko:K02003,ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
GGJMDCOG_00202	0.0	ppc	4.1.1.31	-	H	ko:K01595	ko00620,ko00680,ko00710,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00710,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
GGJMDCOG_00203	5.9e-130	-	-	-	S	-	-	-	ECF transporter, substrate-specific component
GGJMDCOG_00204	1.97e-255	tcsA	-	-	S	ko:K02058,ko:K07335	-	ko00000,ko00002,ko02000	ABC transporter substrate-binding protein PnrA-like
GGJMDCOG_00205	4.57e-232	tcsA	-	-	S	ko:K02058,ko:K07335	-	ko00000,ko00002,ko02000	ABC transporter substrate-binding protein PnrA-like
GGJMDCOG_00206	0.0	mglA	3.6.3.17	-	S	ko:K02056,ko:K06400	-	ko00000,ko00002,ko01000,ko02000	ABC transporter
GGJMDCOG_00207	8.8e-262	mglC	-	-	S	ko:K02057	-	ko00000,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
GGJMDCOG_00208	3.63e-221	yufQ	-	-	S	ko:K02057	-	ko00000,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
GGJMDCOG_00209	3.08e-205	-	-	-	S	-	-	-	Aldo/keto reductase family
GGJMDCOG_00210	1.15e-173	nagB	3.5.99.6	-	G	ko:K02564	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
GGJMDCOG_00211	9.85e-154	dak	2.7.1.76	-	F	ko:K10353	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000	deoxynucleoside kinase
GGJMDCOG_00212	1.06e-159	dgk2	2.7.1.76	-	F	ko:K10353	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000	deoxynucleoside kinase
GGJMDCOG_00213	6.64e-94	-	-	-	-	-	-	-	-
GGJMDCOG_00214	2.56e-179	-	-	-	S	-	-	-	haloacid dehalogenase-like hydrolase
GGJMDCOG_00215	9.69e-292	pbuG	-	-	S	ko:K06901	-	ko00000,ko02000	permease
GGJMDCOG_00216	3.85e-97	-	-	-	S	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 family transporter protein
GGJMDCOG_00217	4.03e-75	-	-	-	S	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 family transporter protein
GGJMDCOG_00218	8.34e-116	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
GGJMDCOG_00219	2.64e-266	guaB	1.1.1.205	-	F	ko:K00088	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
GGJMDCOG_00220	1.34e-191	oppB	-	-	P	ko:K15581	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC-type dipeptide oligopeptide nickel transport systems, permease components
GGJMDCOG_00221	7.82e-240	oppC	-	-	EP	ko:K15582	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC-type dipeptide oligopeptide nickel transport systems, permease components
GGJMDCOG_00222	7.1e-252	oppD	-	-	P	ko:K02031,ko:K15583	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
GGJMDCOG_00223	6.54e-222	oppF	-	-	P	ko:K10823	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
GGJMDCOG_00224	1.64e-45	-	-	-	-	-	-	-	-
GGJMDCOG_00225	3.31e-154	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
GGJMDCOG_00226	3.82e-294	pbuG	-	-	S	ko:K06901	-	ko00000,ko02000	permease
GGJMDCOG_00227	3.69e-54	-	-	-	L	ko:K07473	-	ko00000,ko02048	Addiction module antitoxin, RelB DinJ family
GGJMDCOG_00228	5.05e-11	-	-	-	-	-	-	-	-
GGJMDCOG_00229	3.58e-61	-	-	-	S	ko:K07124	-	ko00000	Enoyl-(Acyl carrier protein) reductase
GGJMDCOG_00230	2.18e-122	yneE	-	-	K	-	-	-	Transcriptional regulator
GGJMDCOG_00231	1.92e-80	yneE	-	-	K	-	-	-	Transcriptional regulator
GGJMDCOG_00232	9.01e-287	-	-	-	S	ko:K07133	-	ko00000	cog cog1373
GGJMDCOG_00233	7.18e-186	-	-	-	S	-	-	-	haloacid dehalogenase-like hydrolase
GGJMDCOG_00234	1.28e-292	pbuG	-	-	S	ko:K06901	-	ko00000,ko02000	permease
GGJMDCOG_00235	7.23e-50	-	-	-	S	ko:K11621	ko02020,map02020	ko00000,ko00001	Putative adhesin
GGJMDCOG_00236	0.0	-	-	-	V	-	-	-	ABC transporter transmembrane region
GGJMDCOG_00237	2.27e-179	-	-	-	-	-	-	-	-
GGJMDCOG_00241	2.23e-48	-	-	-	-	-	-	-	-
GGJMDCOG_00242	2.52e-76	-	-	-	S	-	-	-	Cupredoxin-like domain
GGJMDCOG_00243	4.44e-65	-	-	-	S	-	-	-	Cupredoxin-like domain
GGJMDCOG_00244	0.0	copA	3.6.3.3, 3.6.3.5, 3.6.3.54	-	P	ko:K01534,ko:K17686	ko01524,ko04016,map01524,map04016	ko00000,ko00001,ko01000	P-type ATPase
GGJMDCOG_00245	6.63e-147	crp2	-	-	K	ko:K10914,ko:K21562	ko02020,ko02024,ko02025,ko02026,ko05111,map02020,map02024,map02025,map02026,map05111	ko00000,ko00001,ko03000	helix_turn_helix, cAMP Regulatory protein
GGJMDCOG_00246	7.41e-136	-	-	-	-	-	-	-	-
GGJMDCOG_00247	1.03e-65	-	-	-	EGP	ko:K08368	-	ko00000,ko02000	Sugar (and other) transporter
GGJMDCOG_00248	2.71e-222	-	-	-	EGP	ko:K08368	-	ko00000,ko02000	Sugar (and other) transporter
GGJMDCOG_00249	6.46e-27	-	-	-	-	-	-	-	-
GGJMDCOG_00250	6.49e-268	-	-	-	-	-	-	-	-
GGJMDCOG_00251	6.57e-175	-	-	-	S	-	-	-	SLAP domain
GGJMDCOG_00252	1.14e-154	-	-	-	S	-	-	-	SLAP domain
GGJMDCOG_00253	1.06e-133	-	-	-	S	-	-	-	Bacteriocin helveticin-J
GGJMDCOG_00254	2.35e-58	-	-	-	-	-	-	-	-
GGJMDCOG_00255	8.29e-76	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
GGJMDCOG_00256	1.98e-41	-	-	-	E	-	-	-	Zn peptidase
GGJMDCOG_00257	0.0	eriC	-	-	P	ko:K03281	-	ko00000	chloride
GGJMDCOG_00258	0.0	gnd	1.1.1.343, 1.1.1.44	-	H	ko:K00033	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
GGJMDCOG_00259	5.38e-39	-	-	-	-	-	-	-	-
GGJMDCOG_00260	0.0	pox1	1.2.3.3	-	EH	ko:K00158	ko00620,ko01100,map00620,map01100	ko00000,ko00001,ko01000	Belongs to the TPP enzyme family
GGJMDCOG_00261	0.0	gidA	-	-	D	ko:K03495	-	ko00000,ko03016,ko03036	NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
GGJMDCOG_00262	0.0	mnmE	-	-	S	ko:K03650	-	ko00000,ko01000,ko03016	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
GGJMDCOG_00263	3.37e-192	yidC	-	-	U	ko:K03217	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044,ko03029	Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
GGJMDCOG_00264	2.65e-81	rnpA	3.1.26.5	-	J	ko:K03536	-	ko00000,ko01000,ko03016	RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
GGJMDCOG_00265	3.26e-23	rpmH	-	-	J	ko:K02914	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL34 family
GGJMDCOG_00266	4.47e-148	-	-	-	L	ko:K07497	-	ko00000	hmm pf00665
GGJMDCOG_00267	7.7e-126	-	-	-	L	-	-	-	Helix-turn-helix domain
GGJMDCOG_00268	0.0	-	-	-	C	-	-	-	FMN_bind
GGJMDCOG_00269	3.53e-287	-	-	-	P	ko:K03319	-	ko00000	Sodium:sulfate symporter transmembrane region
GGJMDCOG_00270	2.52e-140	-	-	-	K	-	-	-	LysR family
GGJMDCOG_00271	0.0	-	-	-	C	-	-	-	FMN_bind
GGJMDCOG_00272	4.07e-140	-	-	-	K	-	-	-	LysR family
GGJMDCOG_00273	1.18e-89	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
GGJMDCOG_00274	2.28e-21	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
GGJMDCOG_00275	1.22e-157	glpF	-	-	U	ko:K02440	-	ko00000,ko02000	Belongs to the MIP aquaporin (TC 1.A.8) family
GGJMDCOG_00276	4.92e-73	dhaM	2.7.1.121	-	S	ko:K05881	ko00561,map00561	ko00000,ko00001,ko01000,ko02000	PTS system fructose IIA component
GGJMDCOG_00277	1.39e-120	dhaL	2.7.1.121	-	S	ko:K05879	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Dak2
GGJMDCOG_00278	2.55e-223	dhaK	2.7.1.121	-	G	ko:K05878	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Dak1 domain
GGJMDCOG_00279	0.0	prtB	3.4.21.96	-	O	ko:K01361	-	ko00000,ko01000,ko01002,ko03110	Belongs to the peptidase S8 family
GGJMDCOG_00280	5.03e-297	-	-	-	G	ko:K15770	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding protein
GGJMDCOG_00281	2.18e-103	-	-	-	K	ko:K02529	-	ko00000,ko03000	helix_turn _helix lactose operon repressor
GGJMDCOG_00282	1.27e-311	mntH	-	-	P	ko:K03322	-	ko00000,ko02000	H( )-stimulated, divalent metal cation uptake system
GGJMDCOG_00283	1.64e-59	yitW	-	-	S	-	-	-	Iron-sulfur cluster assembly protein
GGJMDCOG_00284	0.0	sufB	-	-	O	ko:K07033,ko:K09014	-	ko00000	assembly protein SufB
GGJMDCOG_00285	6.98e-78	nifU	-	-	C	ko:K04488	-	ko00000	SUF system FeS assembly protein, NifU family
GGJMDCOG_00286	1.39e-224	sufS	2.8.1.7, 4.4.1.16	-	E	ko:K11717	ko00450,ko01100,map00450,map01100	ko00000,ko00001,ko01000	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
GGJMDCOG_00287	6.22e-232	sufD	-	-	O	ko:K07033,ko:K09015	-	ko00000	FeS assembly protein SufD
GGJMDCOG_00288	4.43e-179	sufC	-	-	O	ko:K09013	-	ko00000,ko02000	FeS assembly ATPase SufC
GGJMDCOG_00289	2.09e-287	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
GGJMDCOG_00290	3.53e-35	-	-	-	C	ko:K21832	-	ko00000	nitric oxide dioxygenase activity
GGJMDCOG_00292	2.45e-64	-	-	-	-	-	-	-	-
GGJMDCOG_00293	4.62e-101	ywdE	-	-	K	ko:K20375	ko02024,map02024	ko00000,ko00001,ko03000	Transcriptional regulator
GGJMDCOG_00295	1.81e-22	repA	-	-	S	-	-	-	Replication initiator protein A (RepA) N-terminus
GGJMDCOG_00296	6.72e-165	-	-	-	-	-	-	-	-
GGJMDCOG_00297	5.13e-70	-	-	-	-	-	-	-	-
GGJMDCOG_00299	8.21e-116	-	-	-	D	-	-	-	ftsk spoiiie
GGJMDCOG_00300	5.48e-103	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
GGJMDCOG_00301	4.55e-157	aapA	-	-	M	-	-	-	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
GGJMDCOG_00302	7.44e-129	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
GGJMDCOG_00303	1.01e-33	dnaQ	2.7.7.7	-	L	ko:K02342	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
GGJMDCOG_00304	5.34e-77	tnpR1	-	-	L	-	-	-	Resolvase, N terminal domain
GGJMDCOG_00305	3.58e-135	-	-	-	L	-	-	-	Transposase
GGJMDCOG_00306	0.0	pepE	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	aminopeptidase
GGJMDCOG_00307	3.4e-93	hsp	-	-	O	ko:K13993	ko04141,map04141	ko00000,ko00001,ko03110	Belongs to the small heat shock protein (HSP20) family
GGJMDCOG_00308	8.08e-100	greA	-	-	K	ko:K03624	-	ko00000,ko03021	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
GGJMDCOG_00309	1.17e-143	-	-	-	-	-	-	-	-
GGJMDCOG_00311	7.04e-145	-	-	-	E	-	-	-	Belongs to the SOS response-associated peptidase family
GGJMDCOG_00312	4.07e-245	trpS	6.1.1.2	-	J	ko:K01867	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-I aminoacyl-tRNA synthetase family
GGJMDCOG_00313	1.5e-116	comEB	3.5.4.12	-	F	ko:K01493	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko02044	MafB19-like deaminase
GGJMDCOG_00314	4.57e-135	-	-	-	S	ko:K06872	-	ko00000	TPM domain
GGJMDCOG_00315	1.71e-173	mgtA	3.6.3.2	-	P	ko:K01531	-	ko00000,ko01000	COG0474 Cation transport ATPase
GGJMDCOG_00316	0.0	mgtA	3.6.3.2	-	P	ko:K01531	-	ko00000,ko01000	COG0474 Cation transport ATPase
GGJMDCOG_00317	0.0	metG	6.1.1.10	-	J	ko:K01874	ko00450,ko00970,map00450,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
GGJMDCOG_00318	2.72e-189	tatD	-	-	L	ko:K03424	-	ko00000,ko01000	hydrolase, TatD family
GGJMDCOG_00319	5.17e-129	rnmV	3.1.26.8	-	J	ko:K05985	-	ko00000,ko01000	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
GGJMDCOG_00320	8.93e-194	ksgA	2.1.1.182	-	J	ko:K02528	-	ko00000,ko01000,ko03009	Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
GGJMDCOG_00321	9.99e-53	veg	-	-	S	-	-	-	Biofilm formation stimulator VEG
GGJMDCOG_00322	2.05e-190	purR	-	-	F	ko:K09685	-	ko00000,ko03000	pur operon repressor
GGJMDCOG_00323	1.81e-307	glmU	2.3.1.157, 2.7.7.23	-	M	ko:K04042	ko00520,ko01100,ko01130,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
GGJMDCOG_00324	5.52e-113	-	-	-	-	-	-	-	-
GGJMDCOG_00325	0.0	-	-	-	S	-	-	-	SLAP domain
GGJMDCOG_00326	5.4e-226	prs	2.7.6.1	-	F	ko:K00948	ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
GGJMDCOG_00327	1.37e-219	-	-	-	GK	-	-	-	ROK family
GGJMDCOG_00328	1.03e-55	-	-	-	-	-	-	-	-
GGJMDCOG_00329	0.0	-	-	-	S	ko:K06885	-	ko00000	Metal dependent phosphohydrolases with conserved 'HD' motif.
GGJMDCOG_00330	1.75e-89	-	-	-	S	-	-	-	Domain of unknown function (DUF1934)
GGJMDCOG_00331	2.83e-90	rpoE	-	-	K	ko:K03048	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko03021,ko03400	Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
GGJMDCOG_00332	0.0	pyrG	6.3.4.2	-	F	ko:K01937	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
GGJMDCOG_00333	1.89e-312	murA	2.5.1.7	-	M	ko:K00790	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
GGJMDCOG_00334	7.28e-97	-	-	-	K	-	-	-	acetyltransferase
GGJMDCOG_00335	0.0	pepDA	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
GGJMDCOG_00336	2.07e-196	msmR	-	-	K	-	-	-	AraC-like ligand binding domain
GGJMDCOG_00337	7.15e-295	pbuX	-	-	F	ko:K03458,ko:K16169	-	ko00000,ko02000	xanthine permease
GGJMDCOG_00338	9.63e-136	xpt	2.4.2.22	-	F	ko:K03816	ko00230,ko01100,ko01110,map00230,map01100,map01110	ko00000,ko00001,ko01000	Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
GGJMDCOG_00339	1.1e-54	-	-	-	K	-	-	-	Helix-turn-helix
GGJMDCOG_00340	0.0	guaA	6.3.5.2	-	F	ko:K01951	ko00230,ko00983,ko01100,map00230,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko01002	Catalyzes the synthesis of GMP from XMP
GGJMDCOG_00341	7.01e-207	-	2.1.1.72	-	L	ko:K07316	-	ko00000,ko01000,ko02048	DNA methylase
GGJMDCOG_00342	3.06e-307	sthIR	3.1.21.5	-	L	ko:K01156	-	ko00000,ko01000,ko02048	Type III restriction enzyme, res subunit
GGJMDCOG_00343	2.13e-53	-	-	-	-	-	-	-	-
GGJMDCOG_00345	5.2e-119	-	-	-	D	-	-	-	ftsk spoiiie
GGJMDCOG_00347	5.45e-72	-	-	-	-	-	-	-	-
GGJMDCOG_00348	5.22e-18	-	-	-	S	-	-	-	Domain of unknown function (DUF3173)
GGJMDCOG_00349	9.95e-214	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
GGJMDCOG_00350	4e-79	-	-	-	L	ko:K07496	-	ko00000	Putative transposase DNA-binding domain
GGJMDCOG_00352	7.68e-129	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
GGJMDCOG_00353	3.64e-309	-	-	-	M	-	-	-	Rib/alpha-like repeat
GGJMDCOG_00355	3.31e-65	XK27_01125	-	-	L	ko:K07484	-	ko00000	PFAM IS66 Orf2 family protein
GGJMDCOG_00357	2.86e-169	-	-	-	L	-	-	-	Transposase and inactivated derivatives
GGJMDCOG_00359	1.71e-154	-	-	-	L	ko:K07459	-	ko00000	AAA ATPase domain
GGJMDCOG_00360	1.61e-145	-	-	-	L	-	-	-	UvrD/REP helicase N-terminal domain
GGJMDCOG_00362	1.39e-143	adh2	1.1.1.1	-	E	ko:K00001	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	alcohol dehydrogenase
GGJMDCOG_00363	5.71e-230	-	3.6.4.12	-	K	ko:K03655	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Putative ATP-dependent DNA helicase recG C-terminal
GGJMDCOG_00364	7.13e-67	-	-	-	K	-	-	-	helix_turn_helix gluconate operon transcriptional repressor
GGJMDCOG_00365	1.53e-189	-	5.2.1.13	-	Q	ko:K09835	ko00906,ko01100,ko01110,map00906,map01100,map01110	ko00000,ko00001,ko00002,ko01000	HI0933-like protein
GGJMDCOG_00366	3.43e-79	-	-	-	C	-	-	-	2Fe-2S iron-sulfur cluster binding domain
GGJMDCOG_00368	4.97e-45	-	3.6.3.2, 3.6.3.6, 3.6.3.8	-	P	ko:K01531,ko:K01535,ko:K01537,ko:K12952	ko00190,map00190	ko00000,ko00001,ko01000	cation transport ATPase
GGJMDCOG_00369	0.0	-	3.6.3.6	-	P	ko:K01535	ko00190,map00190	ko00000,ko00001,ko01000	Cation transporter/ATPase, N-terminus
GGJMDCOG_00370	2.52e-06	-	-	-	D	-	-	-	Domain of Unknown Function (DUF1542)
GGJMDCOG_00371	9.07e-51	-	-	-	S	-	-	-	CRISPR-associated protein (Cas_Csn2)
GGJMDCOG_00372	4.67e-54	cas2	-	-	L	ko:K09951	-	ko00000,ko02048	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
GGJMDCOG_00373	1.44e-164	cas1	-	-	L	ko:K15342	-	ko00000,ko02048,ko03400	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
GGJMDCOG_00374	9e-104	cas9	-	-	L	ko:K09952	-	ko00000,ko01000,ko02048	CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
GGJMDCOG_00375	1.5e-93	cas9	-	-	L	ko:K09952	-	ko00000,ko01000,ko02048	CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
GGJMDCOG_00376	2.76e-112	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
GGJMDCOG_00377	4.31e-175	-	-	-	-	-	-	-	-
GGJMDCOG_00378	5.53e-147	-	-	-	-	ko:K01992	-	ko00000,ko00002,ko02000	-
GGJMDCOG_00379	2.41e-39	-	-	-	-	-	-	-	-
GGJMDCOG_00382	4.82e-144	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
GGJMDCOG_00383	1.25e-94	-	-	-	K	-	-	-	Helix-turn-helix domain
GGJMDCOG_00384	4.78e-261	-	-	-	S	-	-	-	Domain of unknown function (DUF389)
GGJMDCOG_00385	1.53e-122	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
GGJMDCOG_00386	6.49e-137	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
GGJMDCOG_00387	2.23e-99	-	-	-	S	-	-	-	helix_turn_helix, Deoxyribose operon repressor
GGJMDCOG_00388	6.72e-177	-	-	-	EP	-	-	-	Plasmid replication protein
GGJMDCOG_00389	4.63e-32	-	-	-	-	-	-	-	-
GGJMDCOG_00390	7.71e-133	-	-	-	L	-	-	-	Integrase
GGJMDCOG_00391	4.02e-91	-	-	-	T	ko:K07171	-	ko00000,ko01000,ko02048	Toxin-antitoxin system, toxin component, MazF family
GGJMDCOG_00392	5.32e-42	-	-	-	-	ko:K18829	-	ko00000,ko02048	-
GGJMDCOG_00393	3.07e-124	-	-	-	-	-	-	-	-
GGJMDCOG_00394	0.0	-	-	-	L	-	-	-	Transposase DDE domain
GGJMDCOG_00395	1.28e-168	-	-	-	L	-	-	-	PFAM transposase IS116 IS110 IS902
GGJMDCOG_00396	1.08e-229	-	-	-	L	-	-	-	DDE superfamily endonuclease
GGJMDCOG_00397	2.57e-206	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
GGJMDCOG_00398	2.09e-105	ybhL	-	-	S	ko:K06890	-	ko00000	Belongs to the BI1 family
GGJMDCOG_00399	2.37e-169	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
GGJMDCOG_00400	5.35e-170	-	-	-	S	-	-	-	Uncharacterised protein family (UPF0236)
GGJMDCOG_00401	3.94e-183	-	-	-	P	-	-	-	Voltage gated chloride channel
GGJMDCOG_00402	2.83e-237	-	-	-	C	-	-	-	FMN-dependent dehydrogenase
GGJMDCOG_00403	1.05e-69	-	-	-	-	-	-	-	-
GGJMDCOG_00404	1.17e-56	-	-	-	-	-	-	-	-
GGJMDCOG_00405	1.33e-295	glyA	2.1.2.1	-	E	ko:K00600	ko00260,ko00460,ko00630,ko00670,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko01523,map00260,map00460,map00630,map00670,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map01523	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
GGJMDCOG_00406	0.0	-	-	-	E	-	-	-	amino acid
GGJMDCOG_00407	1.64e-200	yhaX	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
GGJMDCOG_00408	0.0	dexB	3.2.1.70	-	G	ko:K01215	-	ko00000,ko01000	Alpha amylase, catalytic domain protein
GGJMDCOG_00409	1.07e-52	rpmE	-	-	J	ko:K02909	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L31
GGJMDCOG_00410	0.0	murF	6.3.2.10	-	M	ko:K01929	ko00300,ko00550,ko01100,ko01502,map00300,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
GGJMDCOG_00411	0.0	cshA	3.6.4.13	-	F	ko:K05592	ko03018,map03018	ko00000,ko00001,ko01000,ko03009,ko03019	DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
GGJMDCOG_00412	9.39e-80	acpS	2.7.8.7	-	I	ko:K00997	ko00770,map00770	ko00000,ko00001,ko01000	Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
GGJMDCOG_00413	1.62e-276	alr	5.1.1.1, 5.1.1.5	-	E	ko:K01775,ko:K20707	ko00473,ko01100,ko01502,map00473,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
GGJMDCOG_00414	7.52e-221	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
GGJMDCOG_00415	1.23e-166	-	-	-	S	-	-	-	(CBS) domain
GGJMDCOG_00416	2.93e-234	ldh	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	Belongs to the LDH MDH superfamily. LDH family
GGJMDCOG_00417	1.89e-134	pth	3.1.1.29	-	J	ko:K01056	-	ko00000,ko01000,ko03012	The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
GGJMDCOG_00418	0.0	mfd	-	-	L	ko:K03723	ko03420,map03420	ko00000,ko00001,ko01000,ko03400	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
GGJMDCOG_00419	6.06e-54	yabO	-	-	J	-	-	-	S4 domain protein
GGJMDCOG_00420	7.52e-78	divIC	-	-	D	ko:K13052	-	ko00000,ko03036	Septum formation initiator
GGJMDCOG_00421	1.61e-81	-	-	-	J	ko:K07571	-	ko00000	S1 RNA binding domain
GGJMDCOG_00422	2.75e-307	tilS	2.4.2.8, 6.3.4.19	-	J	ko:K04075,ko:K15780	ko00230,ko01100,ko01110,map00230,map01100,map01110	ko00000,ko00001,ko01000,ko03016	Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
GGJMDCOG_00423	0.0	ftsH	-	-	O	ko:K03798	-	ko00000,ko00002,ko01000,ko01002,ko03110	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
GGJMDCOG_00424	3.91e-214	hslO	-	-	O	ko:K04083	-	ko00000,ko03110	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
GGJMDCOG_00425	2.77e-248	dus	-	-	J	ko:K05540	-	ko00000,ko01000,ko03016	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
GGJMDCOG_00426	0.0	lysS	6.1.1.6	-	J	ko:K04567	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-II aminoacyl-tRNA synthetase family
GGJMDCOG_00427	2.84e-108	-	-	-	K	-	-	-	FR47-like protein
GGJMDCOG_00432	4.19e-92	ytsP	1.8.4.14	-	T	ko:K08968	ko00270,map00270	ko00000,ko00001,ko01000	GAF domain-containing protein
GGJMDCOG_00433	0.0	clpC	-	-	O	ko:K03696	ko01100,map01100	ko00000,ko03110	Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
GGJMDCOG_00434	0.0	rpoB	2.7.7.6	-	K	ko:K03043	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
GGJMDCOG_00435	0.0	rpoC	2.7.7.6	-	K	ko:K03046	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
GGJMDCOG_00436	7.71e-157	comC	3.4.23.43	-	NOU	ko:K02236	-	ko00000,ko00002,ko01000,ko02044	Bacterial Peptidase A24 N-terminal domain
GGJMDCOG_00437	1.47e-91	rpsL	-	-	J	ko:K02950	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
GGJMDCOG_00438	1.39e-106	rpsG	-	-	J	ko:K02992	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
GGJMDCOG_00439	0.0	fusA	-	-	J	ko:K02355	-	ko00000,ko03012,ko03029	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
GGJMDCOG_00440	6.34e-66	rpsJ	-	-	J	ko:K02946	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Involved in the binding of tRNA to the ribosomes
GGJMDCOG_00441	6.64e-146	rplC	-	-	J	ko:K02906	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
GGJMDCOG_00442	4.68e-138	rplD	-	-	J	ko:K02926	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the polypeptide exit tunnel
GGJMDCOG_00443	1.14e-63	rplW	-	-	J	ko:K02892	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
GGJMDCOG_00444	3.3e-197	rplB	-	-	J	ko:K02886	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
GGJMDCOG_00445	1.14e-62	rpsS	-	-	J	ko:K02965	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
GGJMDCOG_00446	9.07e-73	rplV	-	-	J	ko:K02890	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
GGJMDCOG_00447	8.7e-157	rpsC	-	-	J	ko:K02982	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
GGJMDCOG_00448	1.66e-100	rplP	-	-	J	ko:K02878	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
GGJMDCOG_00449	1.45e-34	rpmC	-	-	J	ko:K02904	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uL29 family
GGJMDCOG_00450	1.56e-55	rpsQ	-	-	J	ko:K02961	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
GGJMDCOG_00451	3.62e-79	rplN	-	-	J	ko:K02874	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
GGJMDCOG_00452	3.03e-44	rplX	-	-	J	ko:K02895	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
GGJMDCOG_00453	1.23e-123	rplE	-	-	J	ko:K02931	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
GGJMDCOG_00454	1e-39	rpsN	-	-	J	ko:K02954	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
GGJMDCOG_00455	7.94e-90	rpsH	-	-	J	ko:K02994	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
GGJMDCOG_00456	7.18e-121	rplF	-	-	J	ko:K02933	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
GGJMDCOG_00457	4.84e-73	rplR	-	-	J	ko:K02881	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
GGJMDCOG_00458	3.73e-110	rpsE	-	-	J	ko:K02988	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
GGJMDCOG_00459	2.22e-34	rpmD	-	-	J	ko:K02907	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L30
GGJMDCOG_00460	4.95e-93	rplO	-	-	J	ko:K02876	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to the 23S rRNA
GGJMDCOG_00461	1.2e-299	secY	-	-	U	ko:K03076	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
GGJMDCOG_00462	1.51e-154	adk	2.7.4.3	-	F	ko:K00939	ko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
GGJMDCOG_00463	3.13e-46	infA	-	-	J	ko:K02518	-	ko00000,ko03012	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
GGJMDCOG_00464	1.89e-21	rpmJ	-	-	J	ko:K02919	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL36 family
GGJMDCOG_00465	2.07e-73	rpsM	-	-	J	ko:K02952	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
GGJMDCOG_00466	3.82e-82	rpsK	-	-	J	ko:K02948	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
GGJMDCOG_00467	3.62e-218	rpoA	2.7.7.6	-	K	ko:K03040	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
GGJMDCOG_00468	2.23e-80	rplQ	-	-	J	ko:K02879	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L17
GGJMDCOG_00469	5.91e-198	ecfA1	-	-	P	ko:K16786	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
GGJMDCOG_00470	1.58e-201	ecfA2	-	-	P	ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
GGJMDCOG_00471	1.53e-175	ecfT	-	-	U	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
GGJMDCOG_00472	5.08e-193	truA	5.4.99.12	-	J	ko:K06173	-	ko00000,ko01000,ko03016	Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
GGJMDCOG_00473	5.35e-102	rplM	-	-	J	ko:K02871	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
GGJMDCOG_00474	3.94e-85	rpsI	-	-	J	ko:K02996	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uS9 family
GGJMDCOG_00475	1.93e-138	-	-	-	L	-	-	-	Phage integrase family
GGJMDCOG_00476	4.47e-81	-	-	-	L	-	-	-	Phage integrase family
GGJMDCOG_00478	4.4e-86	-	-	-	K	-	-	-	LytTr DNA-binding domain
GGJMDCOG_00479	6.11e-66	-	-	-	S	-	-	-	Protein of unknown function (DUF3021)
GGJMDCOG_00480	2.64e-134	-	3.5.1.124	-	S	ko:K03152	-	ko00000,ko01000,ko01002	DJ-1/PfpI family
GGJMDCOG_00481	1.56e-152	-	3.8.1.2	-	S	ko:K01560	ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120	ko00000,ko00001,ko01000	Haloacid dehalogenase-like hydrolase
GGJMDCOG_00482	1.49e-171	-	-	-	S	ko:K07090	-	ko00000	membrane transporter protein
GGJMDCOG_00483	1.56e-160	-	-	-	G	-	-	-	Belongs to the phosphoglycerate mutase family
GGJMDCOG_00484	1.46e-206	-	-	-	P	ko:K16264	-	ko00000,ko02000	cation diffusion facilitator family transporter
GGJMDCOG_00485	2.42e-33	-	-	-	-	-	-	-	-
GGJMDCOG_00486	8.07e-163	gpmA1	5.4.2.11	-	G	ko:K01834	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
GGJMDCOG_00487	5.69e-235	-	-	-	S	-	-	-	AAA domain
GGJMDCOG_00488	8.69e-66	-	-	-	-	-	-	-	-
GGJMDCOG_00489	0.0	pepC	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	Peptidase C1-like family
GGJMDCOG_00490	1.11e-69	-	-	-	-	-	-	-	-
GGJMDCOG_00491	5.22e-131	dut	3.6.1.23	-	F	ko:K01520	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	dUTP diphosphatase
GGJMDCOG_00492	0.0	radA	-	-	O	ko:K04485	-	ko00000,ko03400	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
GGJMDCOG_00493	0.0	gltX	6.1.1.24	-	J	ko:K09698	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
GGJMDCOG_00494	0.0	cysS	6.1.1.16	-	J	ko:K01883	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-I aminoacyl-tRNA synthetase family
GGJMDCOG_00495	2.45e-98	mrnC	-	-	J	ko:K11145	-	ko00000,ko01000,ko03009	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
GGJMDCOG_00496	2.69e-178	trmH	2.1.1.185	-	J	ko:K03218	-	ko00000,ko01000,ko03009	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
GGJMDCOG_00497	1.55e-122	comX	-	-	K	ko:K03088,ko:K03091,ko:K12296	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko03000,ko03021	Belongs to the sigma-70 factor family
GGJMDCOG_00498	1.19e-45	-	-	-	-	-	-	-	-
GGJMDCOG_00499	0.0	gntK	2.7.1.12	-	G	ko:K00851	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko01000	Belongs to the FGGY kinase family
GGJMDCOG_00500	0.0	dxs	2.2.1.7	-	H	ko:K01662	ko00730,ko00900,ko01100,ko01110,ko01130,map00730,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
GGJMDCOG_00501	3.73e-33	secE	-	-	U	ko:K03073	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
GGJMDCOG_00502	5e-130	nusG	-	-	K	ko:K02601	-	ko00000,ko03009,ko03021	Participates in transcription elongation, termination and antitermination
GGJMDCOG_00503	2.69e-90	rplK	-	-	J	ko:K02867	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
GGJMDCOG_00504	1.05e-160	rplA	-	-	J	ko:K02863	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
GGJMDCOG_00505	5.48e-201	pstS	-	-	P	ko:K02040	ko02010,ko02020,ko05152,map02010,map02020,map05152	ko00000,ko00001,ko00002,ko02000	Phosphate
GGJMDCOG_00506	1.13e-210	pstC	-	-	P	ko:K02037	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	probably responsible for the translocation of the substrate across the membrane
GGJMDCOG_00507	3.52e-196	pstA	-	-	P	ko:K02038	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Phosphate transport system permease protein PstA
GGJMDCOG_00508	5.24e-187	pstB2	3.6.3.27	-	P	ko:K02036	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
GGJMDCOG_00509	3.83e-178	pstB1	3.6.3.27	-	P	ko:K02036	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
GGJMDCOG_00510	2.89e-151	phoU	-	-	P	ko:K02039	-	ko00000	Plays a role in the regulation of phosphate uptake
GGJMDCOG_00511	7.66e-116	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
GGJMDCOG_00513	3.72e-111	rplJ	-	-	J	ko:K02864	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
GGJMDCOG_00514	1.61e-72	rplL	-	-	J	ko:K02935	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
GGJMDCOG_00515	9.32e-189	-	2.1.1.172	-	J	ko:K00564,ko:K10716	-	ko00000,ko01000,ko02000,ko03009	Ion channel
GGJMDCOG_00516	5.31e-149	rsmC	2.1.1.172	-	J	ko:K00564	-	ko00000,ko01000,ko03009	Methyltransferase
GGJMDCOG_00517	6.15e-36	-	-	-	-	-	-	-	-
GGJMDCOG_00518	1.08e-117	tadA	3.5.4.33	-	F	ko:K11991	-	ko00000,ko01000,ko03016	Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
GGJMDCOG_00519	0.0	dnaX	2.7.7.7	-	L	ko:K02343	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
GGJMDCOG_00520	1.12e-136	-	-	-	M	-	-	-	family 8
GGJMDCOG_00521	1.15e-47	-	-	-	M	-	-	-	lipopolysaccharide 3-alpha-galactosyltransferase activity
GGJMDCOG_00522	6.31e-68	yaaK	-	-	S	ko:K09747	-	ko00000	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
GGJMDCOG_00523	9.21e-142	recR	-	-	L	ko:K06187	ko03440,map03440	ko00000,ko00001,ko03400	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
GGJMDCOG_00524	1.18e-46	-	-	-	S	-	-	-	Protein of unknown function (DUF2508)
GGJMDCOG_00525	1.15e-146	tmk	2.7.4.9	-	F	ko:K00943	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
GGJMDCOG_00526	1.58e-70	yaaQ	-	-	S	-	-	-	Cyclic-di-AMP receptor
GGJMDCOG_00527	8.4e-199	holB	2.7.7.7	-	L	ko:K02341	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III
GGJMDCOG_00528	1.4e-80	yabA	-	-	L	-	-	-	Involved in initiation control of chromosome replication
GGJMDCOG_00529	3.05e-200	rsmI	2.1.1.198	-	H	ko:K07056	-	ko00000,ko01000,ko03009	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
GGJMDCOG_00530	4.27e-167	fat	3.1.2.21	-	I	ko:K01071	ko00061,ko01100,map00061,map01100	ko00000,ko00001,ko01000,ko01004	Acyl-ACP thioesterase
GGJMDCOG_00531	8.72e-111	-	-	-	S	-	-	-	ECF transporter, substrate-specific component
GGJMDCOG_00532	3.69e-171	yeaZ	2.3.1.234	-	O	ko:K01409,ko:K14742	-	ko00000,ko01000,ko03016	Universal bacterial protein YeaZ
GGJMDCOG_00533	3.93e-125	rimI	2.3.1.128	-	K	ko:K03789	-	ko00000,ko01000,ko03009	Ribosomal-protein-alanine acetyltransferase
GGJMDCOG_00534	1.94e-247	tsaD	2.3.1.234	-	J	ko:K01409	-	ko00000,ko01000,ko03016	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
GGJMDCOG_00535	1.28e-311	-	-	-	L	ko:K07484	-	ko00000	Transposase IS66 family
GGJMDCOG_00536	5.51e-46	-	-	-	S	-	-	-	Transposase C of IS166 homeodomain
GGJMDCOG_00537	4.01e-84	XK27_01125	-	-	L	ko:K07484	-	ko00000	PFAM IS66 Orf2 family protein
GGJMDCOG_00538	9.48e-31	-	-	-	-	-	-	-	-
GGJMDCOG_00539	6.8e-52	bbsF_1	2.8.3.19	-	C	ko:K18702	-	ko00000,ko01000	Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
GGJMDCOG_00540	6.43e-230	frc	2.8.3.16	-	C	ko:K07749	-	ko00000,ko01000	Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
GGJMDCOG_00541	0.0	spxB	1.2.3.3, 1.2.5.1, 2.2.1.6, 4.1.1.8	-	EH	ko:K00156,ko:K00158,ko:K01577,ko:K01652	ko00290,ko00620,ko00630,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00620,map00630,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the TPP enzyme family
GGJMDCOG_00542	0.0	ydiF	-	-	S	ko:K06158	-	ko00000,ko03012	ABC transporter, ATP-binding protein
GGJMDCOG_00543	8.74e-146	rex	-	-	K	ko:K01926	-	ko00000,ko03000	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
GGJMDCOG_00545	6.66e-27	-	-	-	S	-	-	-	CAAX protease self-immunity
GGJMDCOG_00546	2.67e-35	-	-	-	K	ko:K07729	-	ko00000,ko03000	Helix-turn-helix XRE-family like proteins
GGJMDCOG_00548	4.11e-124	potE	-	-	E	-	-	-	thought to be involved in transport amino acids across the membrane
GGJMDCOG_00550	2.23e-189	-	-	-	S	-	-	-	Putative ABC-transporter type IV
GGJMDCOG_00552	5.61e-38	-	-	-	M	-	-	-	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
GGJMDCOG_00553	8.41e-199	-	-	-	L	ko:K07497	-	ko00000	COG2963 Transposase and inactivated derivatives
GGJMDCOG_00554	2.14e-234	scrR	-	-	K	ko:K03484	-	ko00000,ko03000	helix_turn _helix lactose operon repressor
GGJMDCOG_00555	0.0	scrB	3.2.1.26	GH32	G	ko:K01193	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	invertase
GGJMDCOG_00556	0.0	scrA	2.7.1.211	-	G	ko:K02808,ko:K02809,ko:K02810	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
GGJMDCOG_00557	2.14e-231	-	-	-	M	-	-	-	CHAP domain
GGJMDCOG_00558	2.79e-102	-	-	-	-	-	-	-	-
GGJMDCOG_00559	1.06e-58	groS	-	-	O	ko:K04078	-	ko00000,ko03029,ko03110	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
GGJMDCOG_00560	0.0	groL	-	-	O	ko:K04077	ko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
GGJMDCOG_00561	0.0	mutS	-	-	L	ko:K03555	ko03430,map03430	ko00000,ko00001,ko03400	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
GGJMDCOG_00562	0.0	mutL	-	-	L	ko:K03572	ko03430,map03430	ko00000,ko00001,ko03400	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
GGJMDCOG_00563	3.89e-132	ruvA	3.6.4.12	-	L	ko:K03550	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
GGJMDCOG_00564	1.39e-237	ruvB	3.6.4.12	-	L	ko:K03551	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
GGJMDCOG_00565	7.58e-69	yajC	-	-	U	ko:K03210	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Preprotein translocase
GGJMDCOG_00566	0.0	zwf	1.1.1.363, 1.1.1.49	-	G	ko:K00036	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,ko05230,map00030,map00480,map01100,map01110,map01120,map01130,map01200,map05230	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
GGJMDCOG_00567	6.15e-268	dinB	2.7.7.7	-	L	ko:K02346	-	ko00000,ko01000,ko03400	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
GGJMDCOG_00568	3.16e-231	nrnA	3.1.13.3, 3.1.3.7	-	S	ko:K06881	ko00920,ko01100,ko01120,map00920,map01100,map01120	ko00000,ko00001,ko01000,ko03400	DHHA1 domain protein
GGJMDCOG_00569	1.26e-303	cshB	3.6.4.13	-	JKL	ko:K05592,ko:K18692	ko03018,map03018	ko00000,ko00001,ko01000,ko03009,ko03019	DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
GGJMDCOG_00570	0.0	alaS	6.1.1.7	-	J	ko:K01872	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
GGJMDCOG_00571	5.32e-57	yrzL	-	-	S	-	-	-	Belongs to the UPF0297 family
GGJMDCOG_00572	9.37e-96	yrrK	-	-	J	ko:K07447	-	ko00000,ko01000	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
GGJMDCOG_00573	1.18e-66	yrzB	-	-	S	-	-	-	Belongs to the UPF0473 family
GGJMDCOG_00574	0.0	mutS2	-	-	L	ko:K07456	ko03430,map03430	ko00000,ko00001,ko03400	Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
GGJMDCOG_00575	5.37e-72	trxA	-	-	O	ko:K03671	ko04621,ko05418,map04621,map05418	ko00000,ko00001,ko03110	Belongs to the thioredoxin family
GGJMDCOG_00576	2.34e-76	mscL	-	-	M	ko:K03282	-	ko00000,ko02000	Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
GGJMDCOG_00577	5.62e-95	yslB	-	-	S	-	-	-	Protein of unknown function (DUF2507)
GGJMDCOG_00578	4.13e-186	murI	3.6.1.66, 5.1.1.3	-	M	ko:K01776,ko:K02428	ko00230,ko00471,ko01100,map00230,map00471,map01100	ko00000,ko00001,ko01000,ko01011	Provides the (R)-glutamate required for cell wall biosynthesis
GGJMDCOG_00579	8.12e-144	rdgB	3.6.1.66	-	F	ko:K02428	ko00230,map00230	ko00000,ko00001,ko01000	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
GGJMDCOG_00580	1.55e-29	-	-	-	-	-	-	-	-
GGJMDCOG_00581	4.28e-187	ykuT	-	-	M	ko:K16052,ko:K22044	-	ko00000,ko02000	mechanosensitive ion channel
GGJMDCOG_00582	2.96e-23	ytxG	-	-	S	-	-	-	protein containing a divergent version of the methyl-accepting chemotaxis-like domain
GGJMDCOG_00583	3.09e-71	-	-	-	-	-	-	-	-
GGJMDCOG_00584	1.6e-272	pepQ	3.4.13.9	-	E	ko:K01271	-	ko00000,ko01000,ko01002	Creatinase/Prolidase N-terminal domain
GGJMDCOG_00585	1.23e-231	ccpA	-	-	K	ko:K02529	-	ko00000,ko03000	catabolite control protein A
GGJMDCOG_00586	0.0	-	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	glycerophosphoryl diester phosphodiesterase
GGJMDCOG_00587	9.89e-74	-	-	-	-	-	-	-	-
GGJMDCOG_00588	0.0	sasH	3.1.3.5, 3.1.3.6, 3.1.4.16, 3.6.1.45	-	F	ko:K01081,ko:K01119,ko:K07004,ko:K08693,ko:K11751	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the 5'-nucleotidase family
GGJMDCOG_00589	4.25e-119	yutD	-	-	S	-	-	-	Protein of unknown function (DUF1027)
GGJMDCOG_00590	6.38e-184	nagD	3.1.3.41	-	G	ko:K01101	ko00627,ko01120,map00627,map01120	ko00000,ko00001,ko01000	Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
GGJMDCOG_00591	2.15e-137	-	-	-	S	-	-	-	Protein of unknown function (DUF1461)
GGJMDCOG_00592	6.9e-150	dedA	-	-	S	ko:K03975	-	ko00000	SNARE-like domain protein
GGJMDCOG_00593	1.76e-234	yumC	1.18.1.2, 1.19.1.1	-	C	ko:K21567	-	ko00000,ko01000	Ferredoxin--NADP reductase
GGJMDCOG_00621	6.13e-110	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
GGJMDCOG_00622	5.94e-200	-	1.1.1.346	-	S	ko:K06221	-	ko00000,ko01000	reductase
GGJMDCOG_00623	8.97e-47	-	-	-	-	-	-	-	-
GGJMDCOG_00624	1.96e-127	-	3.6.4.12	-	K	ko:K03655	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Putative DNA-binding domain
GGJMDCOG_00625	6.24e-210	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
GGJMDCOG_00626	1.72e-286	-	2.4.1.337	GT4	M	ko:K19002	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000,ko01003	Glycosyl transferase 4-like domain
GGJMDCOG_00627	3.68e-256	cpoA	2.4.1.208	GT4	M	ko:K13677,ko:K13678	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000,ko01003	Glycosyltransferase, group 1 family protein
GGJMDCOG_00628	5.35e-224	mprF	-	-	S	ko:K07027	-	ko00000,ko02000	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
GGJMDCOG_00629	0.0	ltaS	2.7.8.20	-	M	ko:K19005	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
GGJMDCOG_00630	1.3e-40	secG	-	-	U	ko:K03075	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Preprotein translocase
GGJMDCOG_00631	0.0	rnr	-	-	J	ko:K12573	ko03018,map03018	ko00000,ko00001,ko01000,ko03016,ko03019	3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
GGJMDCOG_00632	1.58e-101	smpB	-	-	J	ko:K03664	-	ko00000	the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
GGJMDCOG_00634	2.72e-236	manL	2.7.1.191	-	G	ko:K02793,ko:K02794	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system sorbose subfamily IIB component
GGJMDCOG_00635	9.65e-181	manY	-	-	G	ko:K02746,ko:K02795	ko00051,ko00052,ko00520,ko01100,ko02060,map00051,map00052,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	PTS system
GGJMDCOG_00636	3.51e-222	manN	-	-	G	ko:K02796	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	system, mannose fructose sorbose family IID component
GGJMDCOG_00637	1.31e-81	-	-	-	S	-	-	-	Domain of unknown function (DUF956)
GGJMDCOG_00638	2.07e-203	-	-	-	K	-	-	-	Transcriptional regulator
GGJMDCOG_00639	7.06e-111	-	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	transferase hexapeptide repeat
GGJMDCOG_00640	1.13e-308	cycA	-	-	E	ko:K03293,ko:K11737	-	ko00000,ko02000	Amino acid permease
GGJMDCOG_00641	4.47e-58	adhE	1.1.1.1, 1.2.1.10	-	C	ko:K04072	ko00010,ko00071,ko00350,ko00620,ko00625,ko00626,ko00650,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00620,map00625,map00626,map00650,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	belongs to the iron- containing alcohol dehydrogenase family
GGJMDCOG_00642	0.0	adhE	1.1.1.1, 1.2.1.10	-	C	ko:K04072	ko00010,ko00071,ko00350,ko00620,ko00625,ko00626,ko00650,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00620,map00625,map00626,map00650,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	belongs to the iron- containing alcohol dehydrogenase family
GGJMDCOG_00643	0.0	glmS	2.6.1.16	-	M	ko:K00820	ko00250,ko00520,ko01100,ko01130,ko04931,map00250,map00520,map01100,map01130,map04931	ko00000,ko00001,ko01000,ko01002	Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
GGJMDCOG_00644	0.0	mtlR	-	-	K	ko:K03483	-	ko00000,ko03000	Mga helix-turn-helix domain
GGJMDCOG_00645	0.0	mtlA	2.7.1.197	-	G	ko:K02799,ko:K02800	ko00051,ko02060,map00051,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
GGJMDCOG_00646	5.75e-103	mtlF	2.7.1.197	-	G	ko:K02798	ko00051,ko02060,map00051,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
GGJMDCOG_00647	2.7e-277	mtlD	1.1.1.17	-	C	ko:K00009	ko00051,map00051	ko00000,ko00001,ko01000	mannitol-1-phosphate 5-dehydrogenase activity
GGJMDCOG_00648	5.26e-36	-	4.1.1.44	-	S	ko:K01607	ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220	ko00000,ko00001,ko01000	Carboxymuconolactone decarboxylase family
GGJMDCOG_00649	1.78e-100	-	4.1.1.44	-	S	ko:K01607	ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220	ko00000,ko00001,ko01000	Carboxymuconolactone decarboxylase family
GGJMDCOG_00650	3.36e-42	-	-	-	-	-	-	-	-
GGJMDCOG_00651	9.05e-78	apfA	3.6.1.61	-	F	ko:K18445	ko00230,map00230	ko00000,ko00001,ko01000	Nudix hydrolase
GGJMDCOG_00652	6.94e-202	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
GGJMDCOG_00653	0.0	-	-	-	V	ko:K06147,ko:K06148	-	ko00000,ko02000	ABC transporter transmembrane region
GGJMDCOG_00654	0.0	pckA	4.1.1.49	-	H	ko:K01610	ko00010,ko00020,ko00620,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00710,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Phosphoenolpyruvate carboxykinase
GGJMDCOG_00655	1.23e-242	-	-	-	S	-	-	-	TerB-C domain
GGJMDCOG_00659	4.26e-22	-	-	-	L	ko:K07467	-	ko00000	Replication initiation factor
GGJMDCOG_00660	0.0	nrdE	1.17.4.1	-	F	ko:K00525	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
GGJMDCOG_00661	5.23e-97	nrdI	-	-	F	ko:K03647	-	ko00000	NrdI Flavodoxin like
GGJMDCOG_00662	1.48e-249	nrdF	1.17.4.1	-	F	ko:K00526	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
GGJMDCOG_00663	1.07e-141	tnpR1	-	-	L	-	-	-	Resolvase, N terminal domain
GGJMDCOG_00664	6.91e-92	-	-	-	L	-	-	-	IS1381, transposase OrfA
GGJMDCOG_00665	4.87e-96	tnpA1	-	-	L	-	-	-	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
GGJMDCOG_00666	1.17e-38	-	-	-	-	-	-	-	-
GGJMDCOG_00667	4.65e-184	-	-	-	D	-	-	-	AAA domain
GGJMDCOG_00668	5.88e-212	repA	-	-	S	-	-	-	Replication initiator protein A
GGJMDCOG_00669	1.14e-164	-	-	-	S	-	-	-	Fic/DOC family
GGJMDCOG_00670	1.79e-74	-	-	-	L	-	-	-	Resolvase, N-terminal
GGJMDCOG_00671	4.18e-208	-	-	-	L	ko:K07496	-	ko00000	Putative transposase DNA-binding domain
GGJMDCOG_00672	1.86e-243	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
GGJMDCOG_00673	5.53e-173	-	-	-	S	-	-	-	TerB-C domain
GGJMDCOG_00674	2.14e-312	-	-	-	P	-	-	-	P-loop Domain of unknown function (DUF2791)
GGJMDCOG_00675	0.0	-	-	-	L	ko:K03724	-	ko00000,ko01000,ko03400	DEAD DEAH box helicase
GGJMDCOG_00676	7.82e-80	-	-	-	-	-	-	-	-
GGJMDCOG_00677	1.92e-285	amt	-	-	P	ko:K03320	-	ko00000,ko02000	ammonium transporter
GGJMDCOG_00678	6.58e-175	nfrA	1.5.1.38	-	C	ko:K19285	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	nitroreductase
GGJMDCOG_00680	3.31e-79	psiE	-	-	S	ko:K13256	-	ko00000	Phosphate-starvation-inducible E
GGJMDCOG_00681	5.48e-24	-	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	Maltose acetyltransferase
GGJMDCOG_00682	2.28e-112	-	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	Maltose acetyltransferase
GGJMDCOG_00683	3.65e-90	-	-	-	S	-	-	-	Iron-sulphur cluster biosynthesis
GGJMDCOG_00685	1.04e-41	-	-	-	-	-	-	-	-
GGJMDCOG_00686	1.32e-218	pphA	3.1.3.16	-	T	ko:K07313	-	ko00000,ko01000	Calcineurin-like phosphoesterase
GGJMDCOG_00687	1.25e-17	-	-	-	-	-	-	-	-
GGJMDCOG_00688	1.83e-22	licC	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
GGJMDCOG_00689	6.31e-99	licC	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
GGJMDCOG_00690	2.57e-108	licC	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
GGJMDCOG_00691	1.33e-130	-	-	-	M	-	-	-	LysM domain protein
GGJMDCOG_00692	5.68e-211	-	-	-	D	-	-	-	nuclear chromosome segregation
GGJMDCOG_00693	8.92e-136	-	-	-	G	-	-	-	Phosphoglycerate mutase family
GGJMDCOG_00694	9.01e-115	-	-	-	G	-	-	-	Histidine phosphatase superfamily (branch 1)
GGJMDCOG_00695	1.9e-153	-	-	-	G	-	-	-	Antibiotic biosynthesis monooxygenase
GGJMDCOG_00696	2.67e-148	glpQ1	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	glycerophosphoryl diester phosphodiesterase
GGJMDCOG_00698	0.0	mgtA	3.6.3.2	-	P	ko:K01531	-	ko00000,ko01000	COG0474 Cation transport ATPase
GGJMDCOG_00700	1.93e-266	araT	2.6.1.57	-	E	ko:K00832,ko:K00841	ko00270,ko00300,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01230,map00270,map00300,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase
GGJMDCOG_00701	1.06e-230	XK27_10475	-	-	S	-	-	-	Oxidoreductase family, NAD-binding Rossmann fold
GGJMDCOG_00702	2.47e-153	rpiA1	5.3.1.6	-	G	ko:K01807	ko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
GGJMDCOG_00703	1.43e-186	-	-	-	K	-	-	-	SIS domain
GGJMDCOG_00704	6.76e-309	slpX	-	-	S	-	-	-	SLAP domain
GGJMDCOG_00705	6.39e-32	-	-	-	S	-	-	-	transposase or invertase
GGJMDCOG_00706	5.91e-14	-	-	-	-	-	-	-	-
GGJMDCOG_00707	1.87e-306	npr	1.11.1.1	-	C	ko:K05910	-	ko00000,ko01000	NADH oxidase
GGJMDCOG_00710	6.42e-302	oppA2	-	-	E	ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
GGJMDCOG_00711	1.15e-54	oppA2	-	-	E	ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
GGJMDCOG_00712	2.17e-232	-	-	-	-	-	-	-	-
GGJMDCOG_00713	1.87e-159	gntR1	-	-	K	ko:K03710	-	ko00000,ko03000	UTRA
GGJMDCOG_00714	3.68e-93	tagD	2.7.7.39	-	IM	ko:K00980	ko00564,map00564	ko00000,ko00001,ko01000	Glycerol-3-phosphate cytidylyltransferase
GGJMDCOG_00715	3.02e-171	tagA	2.4.1.187	GT26	F	ko:K05946	ko05111,map05111	ko00000,ko00001,ko01000,ko01003	Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
GGJMDCOG_00716	1.03e-261	-	-	-	M	-	-	-	Glycosyl transferases group 1
GGJMDCOG_00717	0.0	pncB	6.3.4.21	-	F	ko:K00763	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
GGJMDCOG_00718	1.91e-195	nadE	6.3.1.5	-	F	ko:K01916	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
GGJMDCOG_00719	9.83e-261	tnpB	-	-	L	ko:K07496	-	ko00000	Putative transposase DNA-binding domain
GGJMDCOG_00720	0.0	pacL	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	P-type ATPase
GGJMDCOG_00721	9.16e-287	-	-	-	M	-	-	-	CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
GGJMDCOG_00722	0.0	epsU	-	-	S	ko:K03328	-	ko00000	Polysaccharide biosynthesis protein
GGJMDCOG_00723	5.48e-173	-	-	-	M	-	-	-	Glycosyltransferase sugar-binding region containing DXD motif
GGJMDCOG_00724	2.62e-109	ydcK	-	-	S	ko:K03095	-	ko00000	Belongs to the SprT family
GGJMDCOG_00726	2.26e-118	acmA	3.2.1.17, 3.2.1.96	-	NU	ko:K01185,ko:K01227	ko00511,map00511	ko00000,ko00001,ko01000	mannosyl-glycoprotein
GGJMDCOG_00727	0.0	pcrA	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	ATP-dependent DNA helicase
GGJMDCOG_00728	0.0	ligA	6.5.1.2	-	L	ko:K01972	ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430	ko00000,ko00001,ko01000,ko03032,ko03400	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
GGJMDCOG_00729	6.25e-268	camS	-	-	S	-	-	-	sex pheromone
GGJMDCOG_00730	5.42e-67	gatC	6.3.5.6, 6.3.5.7	-	J	ko:K02435	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
GGJMDCOG_00731	0.0	gatA	6.3.5.6, 6.3.5.7	-	J	ko:K02433	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
GGJMDCOG_00732	0.0	gatB	6.3.5.6, 6.3.5.7	-	J	ko:K02434	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
GGJMDCOG_00733	5.58e-219	dagK	2.7.1.107	-	G	ko:K07029	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko01000	Lipid kinase
GGJMDCOG_00734	2.61e-148	ybhL	-	-	S	ko:K06890	-	ko00000	Belongs to the BI1 family
GGJMDCOG_00735	1.46e-75	-	-	-	-	-	-	-	-
GGJMDCOG_00736	9.92e-187	-	-	-	I	-	-	-	transferase activity, transferring acyl groups other than amino-acyl groups
GGJMDCOG_00737	2.79e-309	nhaC	-	-	C	ko:K03315	-	ko00000,ko02000	Na H antiporter NhaC
GGJMDCOG_00738	1.01e-256	flp	-	-	V	-	-	-	Beta-lactamase
GGJMDCOG_00739	0.0	rumA_2	2.1.1.190	-	J	ko:K03215	-	ko00000,ko01000,ko03009	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
GGJMDCOG_00740	1.42e-122	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
GGJMDCOG_00745	0.0	qacA	-	-	EGP	-	-	-	Major Facilitator
GGJMDCOG_00746	1.52e-119	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
GGJMDCOG_00747	0.0	-	4.2.1.53	-	S	ko:K10254	-	ko00000,ko01000	Myosin-crossreactive antigen
GGJMDCOG_00748	6.61e-186	-	-	-	S	ko:K07133	-	ko00000	cog cog1373
GGJMDCOG_00749	6.33e-221	ulaG	-	-	S	ko:K03476	ko00053,ko01100,ko01120,map00053,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Beta-lactamase superfamily domain
GGJMDCOG_00750	4.93e-80	-	2.7.1.194	-	G	ko:K02821	ko00053,ko01100,ko01120,ko02060,map00053,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
GGJMDCOG_00751	6.58e-293	sgaT	-	-	S	ko:K03475	ko00053,ko01100,ko01120,ko02060,map00053,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko02000	PTS system sugar-specific permease component
GGJMDCOG_00752	4.82e-42	ulaB	2.7.1.194	-	G	ko:K02822	ko00053,ko01100,ko01120,ko02060,map00053,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
GGJMDCOG_00753	2.85e-115	ulaD	4.1.1.85, 4.1.2.43	-	G	ko:K03078,ko:K08093	ko00030,ko00040,ko00053,ko00680,ko01100,ko01120,ko01200,ko01230,map00030,map00040,map00053,map00680,map01100,map01120,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Orotidine 5'-phosphate decarboxylase / HUMPS family
GGJMDCOG_00754	1.78e-163	sga	5.1.3.22	-	G	ko:K03079	ko00040,ko00053,ko01100,ko01120,map00040,map00053,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Xylose isomerase-like TIM barrel
GGJMDCOG_00755	1.52e-157	araD	5.1.3.4	-	G	ko:K03077	ko00040,ko00053,ko01100,ko01120,map00040,map00053,map01100,map01120	ko00000,ko00001,ko00002,ko01000	links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source
GGJMDCOG_00756	5.85e-86	nt5e	3.1.3.18	-	L	ko:K01091	ko00630,ko01100,ko01110,ko01130,map00630,map01100,map01110,map01130	ko00000,ko00001,ko01000	haloacid dehalogenase-like hydrolase
GGJMDCOG_00757	0.0	xfp	4.1.2.22, 4.1.2.9	-	G	ko:K01621	ko00030,ko00710,ko01100,ko01120,map00030,map00710,map01100,map01120	ko00000,ko00001,ko01000	Phosphoketolase
GGJMDCOG_00758	1.01e-22	-	-	-	L	-	-	-	Transposase
GGJMDCOG_00759	7.51e-16	-	-	-	L	-	-	-	Transposase
GGJMDCOG_00760	3.76e-18	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
GGJMDCOG_00761	1.71e-128	-	-	-	M	-	-	-	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
GGJMDCOG_00762	1.09e-148	tnpA1	-	-	L	-	-	-	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
GGJMDCOG_00763	3.26e-292	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
GGJMDCOG_00764	4.65e-120	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
GGJMDCOG_00765	8.87e-226	ydbI	-	-	K	-	-	-	AI-2E family transporter
GGJMDCOG_00766	3.93e-134	-	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase
GGJMDCOG_00767	2.55e-26	-	-	-	-	-	-	-	-
GGJMDCOG_00768	1.59e-315	-	-	-	G	ko:K16211	-	ko00000,ko02000	Major Facilitator
GGJMDCOG_00769	8.64e-176	XK27_08845	-	-	S	ko:K05833	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
GGJMDCOG_00770	4.76e-168	XK27_08840	-	-	U	ko:K05832	-	ko00000,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
GGJMDCOG_00771	3.35e-223	ABC-SBP	-	-	S	ko:K01989	-	ko00000,ko00002,ko02000	ABC transporter
GGJMDCOG_00772	7.75e-170	ysaA	3.1.3.5, 3.8.1.2	-	S	ko:K01560,ko:K07025,ko:K08723	ko00230,ko00240,ko00361,ko00625,ko00760,ko01100,ko01110,ko01120,map00230,map00240,map00361,map00625,map00760,map01100,map01110,map01120	ko00000,ko00001,ko01000	Haloacid dehalogenase-like hydrolase
GGJMDCOG_00773	4.17e-201	-	-	-	P	ko:K03284	-	ko00000,ko02000	CorA-like Mg2+ transporter protein
GGJMDCOG_00774	5.74e-206	yvgN	-	-	C	-	-	-	Aldo keto reductase
GGJMDCOG_00775	0.0	fusA1	-	-	J	-	-	-	elongation factor G
GGJMDCOG_00776	3.16e-192	-	3.1.3.102, 3.1.3.104	-	S	ko:K20861	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	haloacid dehalogenase-like hydrolase
GGJMDCOG_00777	1.07e-179	-	-	-	EGP	-	-	-	Major Facilitator Superfamily
GGJMDCOG_00778	9.62e-247	ldhA	1.1.1.28	-	C	ko:K03778,ko:K18347	ko00620,ko01120,ko01502,ko02020,map00620,map01120,map01502,map02020	ko00000,ko00001,ko00002,ko01000,ko01504	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
GGJMDCOG_00779	1.44e-07	-	-	-	S	-	-	-	YSIRK type signal peptide
GGJMDCOG_00782	5.73e-201	xth	3.1.11.2	-	L	ko:K01142	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	exodeoxyribonuclease III
GGJMDCOG_00783	0.0	-	-	-	E	ko:K20265	ko02024,map02024	ko00000,ko00001,ko02000	amino acid
GGJMDCOG_00784	0.0	-	-	-	L	-	-	-	Helicase C-terminal domain protein
GGJMDCOG_00785	1.36e-260	pbpX	-	-	V	-	-	-	Beta-lactamase
GGJMDCOG_00786	1.05e-289	-	-	-	N	ko:K09384	-	ko00000	Uncharacterized conserved protein (DUF2075)
GGJMDCOG_00787	4.19e-92	def2	3.5.1.88	-	J	ko:K01462	-	ko00000,ko01000	Removes the formyl group from the N-terminal Met of newly synthesized proteins
GGJMDCOG_00788	3.55e-28	-	3.6.4.12	-	K	ko:K03655	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Putative DNA-binding domain
GGJMDCOG_00789	3.34e-303	pyrP	-	-	F	ko:K02824	-	ko00000,ko02000	Permease
GGJMDCOG_00790	4.14e-115	pyrR	2.4.2.9	-	F	ko:K02825	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000,ko03000	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
GGJMDCOG_00791	0.0	qacA	-	-	EGP	-	-	-	Major Facilitator
GGJMDCOG_00792	1.06e-195	pmrA	-	-	EGP	ko:K08161	-	ko00000,ko02000	MFS_1 like family
GGJMDCOG_00793	2.33e-230	pepA	-	-	E	-	-	-	M42 glutamyl aminopeptidase
GGJMDCOG_00794	0.0	ykpA	-	-	S	-	-	-	ABC transporter, ATP-binding protein
GGJMDCOG_00795	6.07e-223	ydhF	-	-	S	-	-	-	Aldo keto reductase
GGJMDCOG_00796	1.53e-176	-	-	-	-	-	-	-	-
GGJMDCOG_00797	1.11e-256	steT	-	-	E	ko:K03294	-	ko00000	amino acid
GGJMDCOG_00798	3.97e-33	steT	-	-	E	ko:K03294	-	ko00000	amino acid
GGJMDCOG_00799	3.41e-312	steT	-	-	E	ko:K03294	-	ko00000	amino acid
GGJMDCOG_00800	1.07e-165	-	-	-	F	-	-	-	glutamine amidotransferase
GGJMDCOG_00801	2.05e-188	peb1A	-	-	ET	ko:K10039	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
GGJMDCOG_00802	7.27e-106	-	-	-	K	-	-	-	Transcriptional regulator, MarR family
GGJMDCOG_00803	0.0	XK27_09600	-	-	V	ko:K06147,ko:K18891	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter, ATP-binding protein
GGJMDCOG_00804	0.0	XK27_09605	-	-	V	ko:K18892	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter transmembrane region
GGJMDCOG_00805	1.72e-129	ykoE	-	-	S	ko:K16925	-	ko00000,ko00002,ko02000	ABC-type cobalt transport system, permease component
GGJMDCOG_00806	8.41e-314	-	-	-	G	-	-	-	MFS/sugar transport protein
GGJMDCOG_00807	5.43e-50	udk	2.7.1.48	-	F	ko:K00876	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	Zeta toxin
GGJMDCOG_00808	2.72e-60	udk	2.7.1.48	-	F	ko:K00876	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	Zeta toxin
GGJMDCOG_00809	2.8e-173	glnQ	-	-	E	ko:K10041	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
GGJMDCOG_00810	3.39e-187	glnH	-	-	ET	ko:K10039	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
GGJMDCOG_00811	4.29e-122	glnM	-	-	P	ko:K10040	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
GGJMDCOG_00812	3.65e-141	glnP	-	-	P	ko:K10040	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
GGJMDCOG_00813	1.04e-211	-	-	-	S	-	-	-	Protein of unknown function (DUF2974)
GGJMDCOG_00814	2.09e-110	-	-	-	-	-	-	-	-
GGJMDCOG_00815	3.52e-296	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2325)
GGJMDCOG_00816	2.2e-308	srrA1	-	-	G	ko:K02027,ko:K17244	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding protein
GGJMDCOG_00817	7.29e-209	-	-	-	C	-	-	-	Domain of unknown function (DUF4931)
GGJMDCOG_00818	8.52e-215	rbsK	2.7.1.15	-	H	ko:K00852	ko00030,map00030	ko00000,ko00001,ko01000	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
GGJMDCOG_00819	1.82e-161	rpiA	5.3.1.6	-	G	ko:K01807	ko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
GGJMDCOG_00820	0.0	kup	-	-	P	ko:K03549	-	ko00000,ko02000	Transport of potassium into the cell
GGJMDCOG_00821	1.01e-222	rihC	3.2.2.1	-	F	ko:K01239,ko:K01250,ko:K12700	ko00230,ko00760,ko01100,map00230,map00760,map01100	ko00000,ko00001,ko01000	Nucleoside
GGJMDCOG_00822	6.63e-174	gntR	-	-	K	-	-	-	UbiC transcription regulator-associated domain protein
GGJMDCOG_00823	3.18e-198	-	3.1.3.102, 3.1.3.104	-	S	ko:K20861	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	hydrolase
GGJMDCOG_00824	2.9e-79	-	-	-	S	-	-	-	Enterocin A Immunity
GGJMDCOG_00825	4.44e-174	-	-	-	K	ko:K22103	-	ko00000,ko03000	DeoR C terminal sensor domain
GGJMDCOG_00826	0.0	xfp	4.1.2.22, 4.1.2.9	-	G	ko:K01621	ko00030,ko00710,ko01100,ko01120,map00030,map00710,map01100,map01120	ko00000,ko00001,ko01000	Phosphoketolase
GGJMDCOG_00827	1.85e-205	-	-	-	S	-	-	-	Phospholipase, patatin family
GGJMDCOG_00828	7.44e-189	-	-	-	S	-	-	-	hydrolase
GGJMDCOG_00829	0.0	glvC	2.7.1.208	-	G	ko:K02749,ko:K02750	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system, EIIB
GGJMDCOG_00830	6.89e-190	glvR	-	-	K	ko:K03481	-	ko00000,ko03000	Helix-turn-helix domain, rpiR family
GGJMDCOG_00831	1.52e-103	-	-	-	-	-	-	-	-
GGJMDCOG_00832	1.96e-113	ptbA	2.7.1.208	-	G	ko:K02755,ko:K02777,ko:K20107,ko:K20108	ko00010,ko00500,ko00520,ko02026,ko02060,ko05111,map00010,map00500,map00520,map02026,map02060,map05111	ko00000,ko00001,ko00002,ko01000,ko02000	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
GGJMDCOG_00833	1.76e-52	-	-	-	-	-	-	-	-
GGJMDCOG_00834	2.14e-154	-	-	-	C	-	-	-	nitroreductase
GGJMDCOG_00835	0.0	yhdP	-	-	S	-	-	-	Transporter associated domain
GGJMDCOG_00836	8.59e-133	hpt	2.4.2.8	-	F	ko:K00760	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the purine pyrimidine phosphoribosyltransferase family
GGJMDCOG_00837	0.0	-	1.3.5.4	-	C	ko:K00244	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	ko00000,ko00001,ko00002,ko01000	FAD binding domain
GGJMDCOG_00838	2.88e-113	-	-	-	L	-	-	-	PFAM transposase, IS4 family protein
GGJMDCOG_00839	5.83e-67	-	-	-	L	-	-	-	PFAM transposase, IS4 family protein
GGJMDCOG_00840	6.74e-269	-	1.3.5.4	-	C	ko:K00244	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	ko00000,ko00001,ko00002,ko01000	FAD binding domain
GGJMDCOG_00841	7.32e-157	-	1.3.5.4	-	C	ko:K00244	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	ko00000,ko00001,ko00002,ko01000	FAD binding domain
GGJMDCOG_00842	2.22e-296	-	-	-	E	ko:K03294	-	ko00000	amino acid
GGJMDCOG_00843	6.73e-78	lys	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
GGJMDCOG_00844	2.16e-79	lys	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
GGJMDCOG_00845	5.96e-283	yfmL	-	-	L	-	-	-	DEAD DEAH box helicase
GGJMDCOG_00846	3.76e-316	chbC	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
GGJMDCOG_00848	1.62e-278	mnaA	5.1.3.14	-	G	ko:K01791	ko00520,ko01100,ko05111,map00520,map01100,map05111	ko00000,ko00001,ko00002,ko01000,ko01005	Belongs to the UDP-N-acetylglucosamine 2-epimerase family
GGJMDCOG_00849	6.59e-296	-	-	-	L	-	-	-	Transposase DDE domain
GGJMDCOG_00850	7.46e-113	gtcA1	-	-	S	-	-	-	Teichoic acid glycosylation protein
GGJMDCOG_00851	5.14e-105	ykuP	-	-	C	ko:K03839	-	ko00000	Flavodoxin
GGJMDCOG_00852	9.98e-211	map	3.4.11.18	-	E	ko:K01265	-	ko00000,ko01000,ko01002	Methionine Aminopeptidase
GGJMDCOG_00853	3.44e-209	rbn	-	-	S	ko:K07058	-	ko00000	Belongs to the UPF0761 family
GGJMDCOG_00854	3.22e-215	galU	2.7.7.9	-	M	ko:K00963	ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	UTP-glucose-1-phosphate uridylyltransferase
GGJMDCOG_00855	2.12e-273	atoB	1.1.1.88, 2.3.1.9	-	I	ko:K00054,ko:K00626	ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the thiolase family
GGJMDCOG_00856	4.42e-269	mvaS	2.3.3.10	-	I	ko:K01641	ko00072,ko00280,ko00650,ko00900,ko01100,ko01110,ko01130,map00072,map00280,map00650,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Hydroxymethylglutaryl-CoA synthase
GGJMDCOG_00857	7.74e-61	-	-	-	-	-	-	-	-
GGJMDCOG_00858	1.84e-44	ybcH	-	-	D	ko:K06889	-	ko00000	Alpha beta
GGJMDCOG_00859	1.94e-150	ybcH	-	-	D	ko:K06889	-	ko00000	Alpha beta
GGJMDCOG_00860	0.0	rumA_1	2.1.1.190, 2.1.1.35	-	J	ko:K00557,ko:K03215	-	ko00000,ko01000,ko03009,ko03016	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
GGJMDCOG_00861	2.79e-185	recX	-	-	S	ko:K03565	-	ko00000,ko03400	Regulatory protein RecX
GGJMDCOG_00862	1.74e-111	-	-	-	-	-	-	-	-
GGJMDCOG_00863	7.76e-98	-	-	-	-	-	-	-	-
GGJMDCOG_00864	1.76e-181	hlyX	-	-	S	ko:K03699	-	ko00000,ko02042	Transporter associated domain
GGJMDCOG_00865	0.0	prfC	-	-	J	ko:K02837	-	ko00000,ko03012	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
GGJMDCOG_00866	5.93e-60	XK27_09445	-	-	S	-	-	-	Domain of unknown function (DUF1827)
GGJMDCOG_00867	0.0	clpE	-	-	O	ko:K03697	-	ko00000,ko03110	Belongs to the ClpA ClpB family
GGJMDCOG_00868	2.6e-37	-	-	-	-	-	-	-	-
GGJMDCOG_00869	1.29e-54	ptsH	-	-	G	ko:K11189	-	ko00000,ko02000	phosphocarrier protein HPR
GGJMDCOG_00870	0.0	ptsI	2.7.3.9	-	G	ko:K08483	ko02060,map02060	ko00000,ko00001,ko01000,ko02000	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
GGJMDCOG_00871	6.28e-87	spxA	-	-	K	ko:K16509	-	ko00000	Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
GGJMDCOG_00872	1.5e-178	mecA	-	-	NOT	ko:K16511	-	ko00000	Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
GGJMDCOG_00873	2.63e-205	coiA	-	-	S	ko:K06198	-	ko00000	Competence protein
GGJMDCOG_00874	5.74e-148	yjbH	-	-	Q	-	-	-	Thioredoxin
GGJMDCOG_00875	2.44e-143	-	-	-	S	-	-	-	CYTH
GGJMDCOG_00876	1.7e-147	yjbM	2.7.6.5	-	S	ko:K07816	ko00230,map00230	ko00000,ko00001,ko01000	RelA SpoT domain protein
GGJMDCOG_00877	1.57e-194	nadK	2.7.1.23	-	F	ko:K00858	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
GGJMDCOG_00878	7.96e-221	rluD2	5.4.99.23	-	J	ko:K06180	-	ko00000,ko01000,ko03009	Responsible for synthesis of pseudouridine from uracil
GGJMDCOG_00879	0.0	mycA	4.2.1.53	-	S	ko:K10254	-	ko00000,ko01000	Myosin-crossreactive antigen
GGJMDCOG_00880	3.77e-122	-	-	-	S	-	-	-	SNARE associated Golgi protein
GGJMDCOG_00881	1.01e-255	pgl	3.1.1.31	-	G	ko:K07404	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Lactonase, 7-bladed beta-propeller
GGJMDCOG_00882	1.99e-87	srlB	2.7.1.198	-	G	ko:K02781	ko00051,ko02060,map00051,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system glucitol/sorbitol-specific IIA component
GGJMDCOG_00883	2.19e-270	XK27_05220	-	-	S	-	-	-	AI-2E family transporter
GGJMDCOG_00884	2.12e-136	cspR	2.1.1.207	-	J	ko:K03216	-	ko00000,ko01000,ko03016	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
GGJMDCOG_00885	3.12e-91	-	-	-	S	-	-	-	Protein of unknown function (DUF1149)
GGJMDCOG_00886	0.0	ftsK	-	-	D	ko:K03466	-	ko00000,ko03036	Belongs to the FtsK SpoIIIE SftA family
GGJMDCOG_00887	1.47e-284	ymfF	-	-	S	-	-	-	Peptidase M16 inactive domain protein
GGJMDCOG_00888	5.49e-301	ymfH	-	-	S	-	-	-	Peptidase M16
GGJMDCOG_00889	1.39e-171	fabG	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Enoyl-(Acyl carrier protein) reductase
GGJMDCOG_00890	1.63e-154	ymfM	-	-	S	ko:K15539	-	ko00000	Helix-turn-helix domain
GGJMDCOG_00891	3.92e-123	pgsA	2.7.8.5	-	I	ko:K00995	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
GGJMDCOG_00892	1.17e-248	recA	-	-	L	ko:K03553	ko03440,map03440	ko00000,ko00001,ko00002,ko03400	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
GGJMDCOG_00893	3.03e-293	rny	-	-	S	ko:K18682	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	Endoribonuclease that initiates mRNA decay
GGJMDCOG_00894	1.94e-268	tagO	2.7.8.33, 2.7.8.35	-	M	ko:K02851	-	ko00000,ko01000,ko01003,ko01005	transferase
GGJMDCOG_00895	5.04e-154	yvyE	3.4.13.9	-	S	ko:K01271	-	ko00000,ko01000,ko01002	YigZ family
GGJMDCOG_00896	2.68e-314	comFA	-	-	L	ko:K02240	-	ko00000,ko00002,ko02044	Helicase C-terminal domain protein
GGJMDCOG_00897	9.44e-169	comFC	-	-	S	ko:K02242	-	ko00000,ko00002,ko02044	Competence protein
GGJMDCOG_00898	1.55e-122	hpf	-	-	J	ko:K05808	-	ko00000,ko03009	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
GGJMDCOG_00899	0.0	secA	-	-	U	ko:K03070	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
GGJMDCOG_00900	2.24e-238	prfB	-	-	J	ko:K02836	-	ko00000,ko03012	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
GGJMDCOG_00901	8.33e-27	-	-	-	-	-	-	-	-
GGJMDCOG_00902	3.54e-230	hprK	-	-	F	ko:K06023	-	ko00000,ko01000	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
GGJMDCOG_00903	4.04e-203	lgt	-	-	M	ko:K13292	-	ko00000,ko01000	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
GGJMDCOG_00904	3.31e-239	gpsA	1.1.1.94	-	I	ko:K00057	ko00564,ko01110,map00564,map01110	ko00000,ko00001,ko01000	Glycerol-3-phosphate dehydrogenase
GGJMDCOG_00905	3.42e-232	trxB	1.8.1.9	-	C	ko:K00384	ko00450,map00450	ko00000,ko00001,ko01000	Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
GGJMDCOG_00906	0.0	pgm	5.4.2.2	-	G	ko:K01835	ko00010,ko00030,ko00052,ko00230,ko00500,ko00520,ko00521,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00052,map00230,map00500,map00520,map00521,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
GGJMDCOG_00907	0.0	uvrB	-	-	L	ko:K03702	ko03420,map03420	ko00000,ko00001,ko03400	damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
GGJMDCOG_00908	0.0	uvrA	-	-	L	ko:K03701	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
GGJMDCOG_00909	1.55e-117	-	-	-	S	-	-	-	Short repeat of unknown function (DUF308)
GGJMDCOG_00910	2.44e-211	yvcJ	-	-	S	ko:K06958	-	ko00000,ko03019	Displays ATPase and GTPase activities
GGJMDCOG_00911	2.78e-251	yvcK	-	-	S	-	-	-	Required for morphogenesis under gluconeogenic growth conditions
GGJMDCOG_00912	8.59e-221	whiA	-	-	K	ko:K09762	-	ko00000	May be required for sporulation
GGJMDCOG_00913	1.16e-128	clpP	3.4.21.92	-	O	ko:K01358	ko04112,ko04212,map04112,map04212	ko00000,ko00001,ko01000,ko01002	Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
GGJMDCOG_00914	0.0	-	-	-	S	-	-	-	SH3-like domain
GGJMDCOG_00915	3.16e-144	ybbL	-	-	S	ko:K02068	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
GGJMDCOG_00916	4.76e-168	ybbM	-	-	S	ko:K02069	-	ko00000,ko00002,ko02000	Uncharacterised protein family (UPF0014)
GGJMDCOG_00917	4.64e-63	-	-	-	S	-	-	-	Domain of unknown function (DUF4811)
GGJMDCOG_00918	0.0	ycnB	-	-	U	-	-	-	Belongs to the major facilitator superfamily
GGJMDCOG_00919	7.65e-101	-	-	-	K	-	-	-	MerR HTH family regulatory protein
GGJMDCOG_00920	1.43e-178	-	-	-	S	-	-	-	Cysteine-rich secretory protein family
GGJMDCOG_00921	0.0	ycaM	-	-	E	-	-	-	amino acid
GGJMDCOG_00922	0.0	-	-	-	-	-	-	-	-
GGJMDCOG_00924	9.26e-241	cggR	-	-	K	ko:K05311	-	ko00000,ko03000	Putative sugar-binding domain
GGJMDCOG_00925	2.86e-244	gap	1.2.1.12	-	G	ko:K00134	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
GGJMDCOG_00926	2.86e-286	pgk	2.7.2.3	-	F	ko:K00927	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the phosphoglycerate kinase family
GGJMDCOG_00927	5.46e-183	tpiA	5.3.1.1	-	G	ko:K01803	ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
GGJMDCOG_00928	1.18e-253	-	-	-	L	-	-	-	COG2826 Transposase and inactivated derivatives, IS30 family
GGJMDCOG_00929	3.07e-124	-	-	-	-	-	-	-	-
GGJMDCOG_00930	2.81e-200	ycsE	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
GGJMDCOG_00931	1.64e-174	ung	3.2.2.27	-	L	ko:K03648	ko03410,ko05340,map03410,map05340	ko00000,ko00001,ko01000,ko03400	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
GGJMDCOG_00932	1.1e-232	pta	2.3.1.8, 3.6.3.21	-	C	ko:K00625,ko:K02028	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000,ko02000	phosphate acetyltransferase
GGJMDCOG_00933	4.82e-113	ydiB	-	-	O	ko:K06925	-	ko00000,ko03016	Hydrolase, P-loop family
GGJMDCOG_00934	1.51e-127	dnaQ	2.7.7.7	-	L	ko:K02342	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III
GGJMDCOG_00935	2.84e-208	murB	1.3.1.98	-	M	ko:K00075	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation
GGJMDCOG_00936	1.25e-263	potA	3.6.3.30, 3.6.3.31	-	P	ko:K02010,ko:K11072	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
GGJMDCOG_00937	8.77e-173	potB	-	-	P	ko:K11071	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
GGJMDCOG_00938	3.69e-170	potC	-	-	P	ko:K11070	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
GGJMDCOG_00939	3.46e-266	potD	-	-	P	ko:K11069	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
GGJMDCOG_00940	2.13e-194	dacA	2.7.7.85	-	S	ko:K18672	-	ko00000,ko01000	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
GGJMDCOG_00941	2.76e-221	ybbR	-	-	S	-	-	-	YbbR-like protein
GGJMDCOG_00942	0.0	glmM	5.4.2.10	-	G	ko:K03431	ko00520,ko01100,ko01130,map00520,map01100,map01130	ko00000,ko00001,ko01000	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
GGJMDCOG_00943	8.04e-190	-	-	-	S	-	-	-	hydrolase
GGJMDCOG_00944	3.23e-98	copY	-	-	K	ko:K02171	ko01501,map01501	ko00000,ko00001,ko00002,ko01504,ko03000	Penicillinase repressor
GGJMDCOG_00945	2.85e-153	-	-	-	-	-	-	-	-
GGJMDCOG_00946	3.07e-112	ptpA	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
GGJMDCOG_00947	2.52e-262	glxK	2.7.1.165	-	G	ko:K00865	ko00260,ko00561,ko00630,ko01100,ko01120,ko01130,map00260,map00561,map00630,map01100,map01120,map01130	ko00000,ko00001,ko01000	Belongs to the glycerate kinase type-1 family
GGJMDCOG_00948	8.39e-195	bglG5	-	-	K	ko:K03488	-	ko00000,ko03000	CAT RNA binding domain
GGJMDCOG_00949	0.0	pts33BCA	-	-	G	ko:K02755,ko:K02756,ko:K02757	ko02060,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
GGJMDCOG_00950	0.0	-	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
GGJMDCOG_00951	5.12e-199	ybcH	-	-	D	ko:K06889	-	ko00000	Alpha beta
GGJMDCOG_00952	6.91e-118	-	-	-	T	-	-	-	Putative diguanylate phosphodiesterase
GGJMDCOG_00953	2.21e-34	-	4.1.2.50, 4.2.3.12	-	H	ko:K01737	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000,ko03016	6-pyruvoyl tetrahydropterin synthase
GGJMDCOG_00954	1.67e-136	icaA	-	-	M	-	-	-	Glycosyl transferase family group 2
GGJMDCOG_00955	2.64e-46	-	-	-	-	-	-	-	-
GGJMDCOG_00956	1.96e-110	-	2.7.7.65	-	T	ko:K02488	ko02020,ko04112,map02020,map04112	ko00000,ko00001,ko00002,ko01000,ko02022	GGDEF domain
GGJMDCOG_00957	1.14e-99	-	-	-	M	-	-	-	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
GGJMDCOG_00959	0.0	-	-	-	E	-	-	-	Amino acid permease
GGJMDCOG_00960	2.15e-127	-	-	-	L	-	-	-	Helix-turn-helix domain
GGJMDCOG_00961	4.31e-204	-	-	-	L	ko:K07497	-	ko00000	hmm pf00665
GGJMDCOG_00963	3.96e-37	rpsN	-	-	J	ko:K02954	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
GGJMDCOG_00964	1.49e-130	ylbE	-	-	GM	-	-	-	NAD(P)H-binding
GGJMDCOG_00965	2.33e-120	-	-	-	S	-	-	-	VanZ like family
GGJMDCOG_00966	5.65e-171	yebC	-	-	K	-	-	-	Transcriptional regulatory protein
GGJMDCOG_00967	5.04e-231	comGA	-	-	NU	ko:K02243	-	ko00000,ko00002,ko02044	Type II IV secretion system protein
GGJMDCOG_00968	1.72e-222	comGB	-	-	NU	ko:K02244	-	ko00000,ko00002,ko02044	type II secretion system
GGJMDCOG_00969	7.88e-63	comGC	-	-	U	ko:K02245	-	ko00000,ko00002,ko02044	competence protein ComGC
GGJMDCOG_00970	8.19e-91	-	-	-	-	ko:K02246	-	ko00000,ko00002,ko02044	-
GGJMDCOG_00971	1.68e-55	-	-	-	-	-	-	-	-
GGJMDCOG_00972	1.94e-100	-	-	-	U	ko:K02248	-	ko00000,ko00002,ko02044	Putative Competence protein ComGF
GGJMDCOG_00973	3.69e-30	-	-	-	-	-	-	-	-
GGJMDCOG_00974	2.42e-238	ytxK	2.1.1.72	-	L	ko:K00571	-	ko00000,ko01000,ko02048	N-6 DNA Methylase
GGJMDCOG_00975	1.07e-281	ackA	2.7.2.1	-	F	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
GGJMDCOG_00977	3e-128	-	-	-	M	-	-	-	Protein of unknown function (DUF3737)
GGJMDCOG_00978	1.72e-288	patB	4.4.1.8	-	E	ko:K14155	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko01000,ko01007	Aminotransferase, class I
GGJMDCOG_00979	1.93e-242	manA	5.3.1.8	-	G	ko:K01809	ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	mannose-6-phosphate isomerase
GGJMDCOG_00980	9.01e-90	-	-	-	S	-	-	-	SdpI/YhfL protein family
GGJMDCOG_00981	4.96e-167	-	-	-	K	-	-	-	Transcriptional regulatory protein, C terminal
GGJMDCOG_00982	0.0	yclK	-	-	T	-	-	-	Histidine kinase
GGJMDCOG_00983	0.0	ltaS	2.7.8.20	-	M	ko:K19005	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
GGJMDCOG_00984	1.52e-136	vanZ	-	-	V	-	-	-	VanZ like family
GGJMDCOG_00985	0.0	pgi	5.3.1.9	-	G	ko:K01810	ko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the GPI family
GGJMDCOG_00986	4.63e-274	-	-	-	EGP	-	-	-	Major Facilitator
GGJMDCOG_00987	3.94e-250	ampC	-	-	V	-	-	-	Beta-lactamase
GGJMDCOG_00990	0.0	murE2	6.3.2.13	-	M	ko:K01928	ko00300,ko00550,map00300,map00550	ko00000,ko00001,ko01000,ko01011	Domain of unknown function (DUF1727)
GGJMDCOG_00991	9.98e-146	tdk	2.7.1.21	-	F	ko:K00857	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	thymidine kinase
GGJMDCOG_00992	6.6e-237	prfA	-	-	J	ko:K02835	-	ko00000,ko03012	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
GGJMDCOG_00993	1.24e-198	prmC	2.1.1.297	-	J	ko:K02493	-	ko00000,ko01000,ko03012	Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
GGJMDCOG_00994	1.36e-242	ywlC	2.7.7.87	-	J	ko:K07566	-	ko00000,ko01000,ko03009,ko03016	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
GGJMDCOG_00995	5.28e-146	upp	2.4.2.9	-	F	ko:K00761	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
GGJMDCOG_00996	1.01e-166	atpB	-	-	C	ko:K02108	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko03110	it plays a direct role in the translocation of protons across the membrane
GGJMDCOG_00997	4.83e-37	atpE	-	-	C	ko:K02110	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
GGJMDCOG_00998	2.57e-83	atpF	-	-	C	ko:K02109	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
GGJMDCOG_00999	3.24e-120	atpH	-	-	C	ko:K02113	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
GGJMDCOG_01000	0.0	atpA	3.6.3.14	-	C	ko:K02111	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko01000	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
GGJMDCOG_01001	1.04e-221	atpG	-	-	C	ko:K02115	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
GGJMDCOG_01002	0.0	atpD	3.6.3.14	-	C	ko:K02112	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko01000	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
GGJMDCOG_01003	2.45e-93	atpC	-	-	C	ko:K02114	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Produces ATP from ADP in the presence of a proton gradient across the membrane
GGJMDCOG_01004	2.54e-42	-	-	-	S	-	-	-	Protein of unknown function (DUF1146)
GGJMDCOG_01005	4.81e-227	mbl	-	-	D	ko:K03569	-	ko00000,ko02048,ko03036,ko04812	Cell shape determining protein MreB Mrl
GGJMDCOG_01006	1.59e-68	ytjA	-	-	S	ko:K08998	-	ko00000	Could be involved in insertion of integral membrane proteins into the membrane
GGJMDCOG_01007	5.13e-46	-	-	-	S	-	-	-	Protein of unknown function (DUF2969)
GGJMDCOG_01008	1.18e-275	rodA	-	-	D	ko:K05837	-	ko00000,ko03036	Belongs to the SEDS family
GGJMDCOG_01009	9.45e-104	uspA	-	-	T	-	-	-	universal stress protein
GGJMDCOG_01010	1.35e-56	-	-	-	-	-	-	-	-
GGJMDCOG_01011	1.47e-302	rarA	-	-	L	ko:K07478	-	ko00000	recombination factor protein RarA
GGJMDCOG_01012	8.08e-110	-	-	-	S	-	-	-	Protein of unknown function (DUF1694)
GGJMDCOG_01013	3.07e-142	rpsD	-	-	J	ko:K02986	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
GGJMDCOG_01014	0.0	ezrA	-	-	D	ko:K06286	-	ko00000,ko03036	modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
GGJMDCOG_01015	3.52e-272	iscS2	2.8.1.7	-	E	ko:K04487	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko02048,ko03016,ko03029	Aminotransferase class V
GGJMDCOG_01016	3.48e-288	thiI	2.8.1.4	-	H	ko:K03151	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko03016	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
GGJMDCOG_01017	2.1e-232	-	3.6.4.12	-	K	ko:K03655	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Putative ATP-dependent DNA helicase recG C-terminal
GGJMDCOG_01018	6.01e-153	rsuA	5.4.99.19	-	J	ko:K06183	-	ko00000,ko01000,ko03009	Belongs to the pseudouridine synthase RsuA family
GGJMDCOG_01019	3.97e-57	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
GGJMDCOG_01020	1.06e-86	-	-	-	S	-	-	-	GtrA-like protein
GGJMDCOG_01021	4.08e-218	yfdH	-	GT2	M	ko:K12999	-	ko00000,ko01000,ko01003,ko01005	Glycosyltransferase, group 2 family protein
GGJMDCOG_01022	3.33e-123	-	-	-	S	-	-	-	Protein of unknown function (DUF3990)
GGJMDCOG_01023	8.53e-59	-	-	-	-	-	-	-	-
GGJMDCOG_01024	9.25e-13	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
GGJMDCOG_01025	0.0	yoaB	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	P-type ATPase
GGJMDCOG_01026	3.02e-166	-	-	-	S	ko:K06926	-	ko00000	AAA domain, putative AbiEii toxin, Type IV TA system
GGJMDCOG_01027	2.91e-67	-	-	-	-	-	-	-	-
GGJMDCOG_01028	0.0	valS	6.1.1.9	-	J	ko:K01873	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
GGJMDCOG_01029	1.22e-306	folC	6.3.2.12, 6.3.2.17	-	H	ko:K11754	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the folylpolyglutamate synthase family
GGJMDCOG_01030	1.06e-162	-	-	-	S	-	-	-	Haloacid dehalogenase-like hydrolase
GGJMDCOG_01031	6.18e-150	radC	-	-	L	ko:K03630	-	ko00000	DNA repair protein
GGJMDCOG_01032	8.26e-226	mreB	-	-	D	ko:K03569	-	ko00000,ko02048,ko03036,ko04812	cell shape determining protein MreB
GGJMDCOG_01033	8.27e-189	mreC	-	-	M	ko:K03570	-	ko00000,ko03036	Involved in formation and maintenance of cell shape
GGJMDCOG_01034	5.43e-122	mreD	-	-	-	ko:K03571	-	ko00000,ko03036	-
GGJMDCOG_01035	1.4e-09	-	-	-	S	-	-	-	Protein of unknown function (DUF4044)
GGJMDCOG_01036	1.02e-72	-	-	-	S	-	-	-	Protein of unknown function (DUF3397)
GGJMDCOG_01037	5.63e-102	mraZ	-	-	K	ko:K03925	-	ko00000	Belongs to the MraZ family
GGJMDCOG_01038	1.49e-223	rsmH	2.1.1.199	-	J	ko:K03438	-	ko00000,ko01000,ko03009	Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
GGJMDCOG_01039	6.55e-72	ftsL	-	-	D	-	-	-	Cell division protein FtsL
GGJMDCOG_01040	0.0	pbpX	-	-	M	ko:K08724,ko:K12552,ko:K12556	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01011	Penicillin-binding Protein
GGJMDCOG_01041	4.43e-224	mraY	2.7.8.13	-	M	ko:K01000	ko00550,ko01100,ko01502,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
GGJMDCOG_01042	0.0	murD	6.3.2.9	-	M	ko:K01925	ko00471,ko00550,ko01100,map00471,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
GGJMDCOG_01043	3.88e-264	murG	2.4.1.227	GT28	M	ko:K02563	ko00550,ko01100,ko01502,ko04112,map00550,map01100,map01502,map04112	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
GGJMDCOG_01044	3.14e-194	divIB	-	-	D	ko:K03589	ko04112,map04112	ko00000,ko00001,ko03036	Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
GGJMDCOG_01045	3.3e-315	ftsA	-	-	D	ko:K03590	ko04112,map04112	ko00000,ko00001,ko03036,ko04812	Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
GGJMDCOG_01046	2.52e-300	ftsZ	-	-	D	ko:K03531	ko04112,map04112	ko00000,ko00001,ko02048,ko03036,ko04812	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
GGJMDCOG_01047	1.43e-96	sepF	-	-	D	ko:K09772	-	ko00000,ko03036	Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
GGJMDCOG_01048	2.42e-60	yggT	-	-	S	ko:K02221	-	ko00000,ko02044	YGGT family
GGJMDCOG_01049	4.01e-192	ylmH	-	-	S	-	-	-	S4 domain protein
GGJMDCOG_01050	6.3e-138	divIVA	-	-	D	ko:K04074	-	ko00000,ko03036	DivIVA domain protein
GGJMDCOG_01051	0.0	ileS	6.1.1.5	-	J	ko:K01870	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
GGJMDCOG_01052	2.32e-43	cspA	-	-	K	ko:K03704	-	ko00000,ko03000	'Cold-shock' DNA-binding domain
GGJMDCOG_01053	5.18e-134	nudF	3.6.1.13	-	L	ko:K01515	ko00230,map00230	ko00000,ko00001,ko01000	ADP-ribose pyrophosphatase
GGJMDCOG_01054	1.22e-55	-	-	-	-	-	-	-	-
GGJMDCOG_01055	2.05e-163	mtnN	3.2.2.9	-	E	ko:K01243	ko00270,ko01100,ko01230,map00270,map01100,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
GGJMDCOG_01056	1.62e-276	iscS	2.8.1.7	-	E	ko:K04487	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko02048,ko03016,ko03029	Aminotransferase class V
GGJMDCOG_01057	9.98e-75	XK27_04120	-	-	S	-	-	-	Putative amino acid metabolism
GGJMDCOG_01058	4.47e-278	mnmA	2.8.1.13	-	J	ko:K00566	ko04122,map04122	ko00000,ko00001,ko01000,ko03016	Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
GGJMDCOG_01059	4.7e-163	pgm	-	-	G	-	-	-	Phosphoglycerate mutase family
GGJMDCOG_01060	2.31e-148	-	-	-	S	-	-	-	repeat protein
GGJMDCOG_01061	0.0	recD2	3.1.11.5	-	L	ko:K03581	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
GGJMDCOG_01062	0.0	-	-	-	L	-	-	-	Nuclease-related domain
GGJMDCOG_01063	1.75e-211	ytlR	-	-	I	-	-	-	Diacylglycerol kinase catalytic domain
GGJMDCOG_01064	0.0	rnjA	-	-	J	ko:K12574	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
GGJMDCOG_01065	5.22e-45	ykzG	-	-	S	-	-	-	Belongs to the UPF0356 family
GGJMDCOG_01066	2.79e-131	def	3.5.1.88	-	J	ko:K01462	-	ko00000,ko01000	Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
GGJMDCOG_01067	0.0	typA	-	-	T	ko:K06207	-	ko00000	GTP-binding protein TypA
GGJMDCOG_01068	3.91e-268	ftsW	-	-	D	ko:K03588	ko04112,map04112	ko00000,ko00001,ko02000,ko03036	Belongs to the SEDS family
GGJMDCOG_01069	4.05e-70	ylbG	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2129)
GGJMDCOG_01070	5.21e-126	rsmD	2.1.1.171	-	L	ko:K08316	-	ko00000,ko01000,ko03009	RNA methyltransferase, RsmD family
GGJMDCOG_01071	7.07e-107	coaD	2.7.7.3	-	H	ko:K00954	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
GGJMDCOG_01072	1.42e-244	lon	-	-	T	ko:K07177	ko02024,map02024	ko00000,ko00001,ko01002	Belongs to the peptidase S16 family
GGJMDCOG_01073	2.7e-126	comEA	-	-	L	ko:K02237	-	ko00000,ko00002,ko02044	Competence protein ComEA
GGJMDCOG_01074	0.0	comEC	-	-	S	ko:K02238	-	ko00000,ko00002,ko02044	Competence protein ComEC
GGJMDCOG_01075	2.57e-226	holA	2.7.7.7	-	L	ko:K02340	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III delta subunit
GGJMDCOG_01076	3.64e-46	rpsT	-	-	J	ko:K02968	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 16S ribosomal RNA
GGJMDCOG_01077	7.11e-57	rpsO	-	-	J	ko:K02956	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
GGJMDCOG_01078	0.0	rnjB	-	-	J	ko:K12574	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
GGJMDCOG_01079	2.21e-190	-	-	-	-	-	-	-	-
GGJMDCOG_01080	5.76e-287	tuf	-	-	J	ko:K02358,ko:K15771	ko02010,map02010	ko00000,ko00001,ko00002,ko02000,ko03012,ko03029,ko04147	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
GGJMDCOG_01081	2.49e-282	tig	-	-	D	ko:K03545	-	ko00000	Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
GGJMDCOG_01082	3.04e-297	clpX	-	-	O	ko:K03544	ko04112,map04112	ko00000,ko00001,ko03110	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
GGJMDCOG_01083	1.59e-136	engB	-	-	D	ko:K03978	-	ko00000,ko03036	Necessary for normal cell division and for the maintenance of normal septation
GGJMDCOG_01084	2.58e-48	potE	-	-	E	-	-	-	Amino Acid
GGJMDCOG_01085	1.27e-220	potE	-	-	E	-	-	-	Amino Acid
GGJMDCOG_01086	6.25e-246	dapF	5.1.1.7	-	E	ko:K01778	ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
GGJMDCOG_01087	0.0	lysC	2.7.2.4	-	E	ko:K00928	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the aspartokinase family
GGJMDCOG_01088	1.39e-312	lysA	4.1.1.20	-	E	ko:K01586	ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
GGJMDCOG_01089	8.62e-105	dapH	2.3.1.117, 2.3.1.89	-	E	ko:K00674,ko:K05822	ko00300,ko01100,ko01110,ko01120,ko01230,map00300,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
GGJMDCOG_01090	3.29e-280	hipO	3.5.1.47	-	E	ko:K05823	ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000,ko01002	Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
GGJMDCOG_01091	3.66e-225	dapA	4.3.3.7	-	E	ko:K01714	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
GGJMDCOG_01092	6.89e-185	dapB	1.17.1.8	-	E	ko:K00215	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
GGJMDCOG_01093	9.03e-277	aspC	-	-	E	ko:K00841	ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase
GGJMDCOG_01094	2.48e-252	asd	1.2.1.11	-	E	ko:K00133	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
GGJMDCOG_01095	4.2e-249	pbpX1	-	-	V	-	-	-	Beta-lactamase
GGJMDCOG_01096	0.0	-	-	-	I	-	-	-	Protein of unknown function (DUF2974)
GGJMDCOG_01097	2.08e-95	yfhC	-	-	C	-	-	-	nitroreductase
GGJMDCOG_01098	8.85e-94	-	-	-	S	-	-	-	Domain of unknown function (DUF4767)
GGJMDCOG_01099	1.43e-310	eno	4.2.1.11	-	G	ko:K01689	ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066	ko00000,ko00001,ko00002,ko01000,ko03019,ko04147	Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
GGJMDCOG_01100	1.23e-187	-	-	-	S	-	-	-	Uncharacterised protein, DegV family COG1307
GGJMDCOG_01101	1.94e-130	-	-	-	I	-	-	-	PAP2 superfamily
GGJMDCOG_01103	1.61e-48	-	-	-	S	-	-	-	Cytochrome B5
GGJMDCOG_01104	1.87e-213	arbZ	-	-	I	-	-	-	Phosphate acyltransferases
GGJMDCOG_01105	5.48e-235	-	-	-	M	-	-	-	Glycosyl transferase family 8
GGJMDCOG_01106	1.91e-236	-	-	-	M	-	-	-	Glycosyl transferase family 8
GGJMDCOG_01107	7.23e-201	arbx	-	-	M	-	-	-	Glycosyl transferase family 8
GGJMDCOG_01108	4.19e-192	-	-	-	I	-	-	-	Acyl-transferase
GGJMDCOG_01110	1.09e-46	-	-	-	-	-	-	-	-
GGJMDCOG_01112	3.98e-169	yycF	-	-	K	ko:K07668	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	response regulator
GGJMDCOG_01113	0.0	vicK	2.7.13.3	-	T	ko:K07652	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
GGJMDCOG_01114	0.0	yycH	-	-	S	-	-	-	YycH protein
GGJMDCOG_01115	7.44e-192	yycI	-	-	S	-	-	-	YycH protein
GGJMDCOG_01116	1.19e-188	vicX	3.1.26.11	-	S	ko:K00784	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	domain protein
GGJMDCOG_01117	3.17e-224	htrA	3.4.21.107	-	O	ko:K04771	ko01503,ko02020,map01503,map02020	ko00000,ko00001,ko00002,ko01000,ko01002,ko03110	serine protease
GGJMDCOG_01118	8.64e-107	rlmH	2.1.1.177	-	J	ko:K00783	-	ko00000,ko01000,ko03009	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
GGJMDCOG_01119	1.21e-243	cbh	3.5.1.24	-	M	ko:K01442	ko00120,ko00121,ko01100,map00120,map00121,map01100	ko00000,ko00001,ko01000	Linear amide C-N hydrolase, choloylglycine hydrolase family protein
GGJMDCOG_01121	1.73e-227	-	-	-	S	-	-	-	Conserved hypothetical protein 698
GGJMDCOG_01122	1.63e-109	dps	-	-	P	ko:K04047	-	ko00000,ko03036	Belongs to the Dps family
GGJMDCOG_01123	3.87e-15	-	1.3.5.4	-	C	ko:K00244	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	ko00000,ko00001,ko00002,ko01000	FMN_bind
GGJMDCOG_01124	2.33e-130	-	-	-	S	ko:K07025	-	ko00000	Haloacid dehalogenase-like hydrolase
GGJMDCOG_01125	2.43e-95	-	-	-	S	ko:K11621	ko02020,map02020	ko00000,ko00001	Putative adhesin
GGJMDCOG_01126	4.36e-93	-	-	-	K	ko:K03827	-	ko00000,ko01000	Acetyltransferase (GNAT) domain
GGJMDCOG_01127	8.44e-300	mepA	-	-	V	ko:K18908	-	ko00000,ko00002,ko01504,ko02000	MATE efflux family protein
GGJMDCOG_01128	6.95e-50	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
GGJMDCOG_01129	1.16e-13	-	-	-	L	-	-	-	Psort location Cytoplasmic, score
GGJMDCOG_01130	1.32e-114	-	2.7.7.49	-	L	ko:K00986	-	ko00000,ko01000	PFAM RNA-directed DNA polymerase (Reverse transcriptase)
GGJMDCOG_01131	1.91e-103	ribH	2.5.1.78	-	H	ko:K00794	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin
GGJMDCOG_01132	4.39e-289	ribBA	3.5.4.25, 4.1.99.12	-	H	ko:K14652	ko00740,ko00790,ko01100,ko01110,map00740,map00790,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate
GGJMDCOG_01133	7.5e-111	ribE	2.5.1.9	-	H	ko:K00793	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Riboflavin synthase
GGJMDCOG_01134	3.68e-176	ribD	1.1.1.193, 3.5.4.26	-	H	ko:K11752	ko00740,ko01100,ko01110,ko02024,map00740,map01100,map01110,map02024	ko00000,ko00001,ko00002,ko01000	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
GGJMDCOG_01136	1.5e-176	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
GGJMDCOG_01137	2.24e-71	ykoJ	-	-	S	-	-	-	Peptidase propeptide and YPEB domain
GGJMDCOG_01138	8.41e-42	adh2	1.1.1.1	-	E	ko:K00001	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	alcohol dehydrogenase
GGJMDCOG_01139	2.25e-137	ribE	2.5.1.9	-	H	ko:K00793	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Riboflavin synthase
GGJMDCOG_01140	5.29e-256	ribD	1.1.1.193, 3.5.4.26	-	H	ko:K11752	ko00740,ko01100,ko01110,ko02024,map00740,map01100,map01110,map02024	ko00000,ko00001,ko00002,ko01000	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
GGJMDCOG_01141	5.75e-152	yjcA	-	-	S	ko:K19350	ko02010,map02010	ko00000,ko00001,ko01504,ko02000	ABC transporter
GGJMDCOG_01142	4.83e-107	ybbB	-	-	S	-	-	-	Protein of unknown function (DUF1211)
GGJMDCOG_01143	1.53e-142	ltrA	-	-	S	-	-	-	Bacterial low temperature requirement A protein (LtrA)
GGJMDCOG_01144	6.21e-153	yjhB	3.6.1.13	-	F	ko:K01515	ko00230,map00230	ko00000,ko00001,ko01000	NUDIX domain
GGJMDCOG_01145	1.63e-313	brnQ	-	-	U	ko:K03311	-	ko00000	Component of the transport system for branched-chain amino acids
GGJMDCOG_01146	0.0	-	-	-	L	-	-	-	Plasmid pRiA4b ORF-3-like protein
GGJMDCOG_01147	2.81e-76	-	-	-	EGP	-	-	-	Major Facilitator
GGJMDCOG_01148	4.45e-156	rbtT	-	-	P	ko:K13021	-	ko00000,ko02000	Major Facilitator Superfamily
GGJMDCOG_01149	5.25e-258	XK27_00915	-	-	C	-	-	-	Luciferase-like monooxygenase
GGJMDCOG_01150	4.6e-113	-	-	-	K	-	-	-	GNAT family
GGJMDCOG_01151	1.46e-161	-	-	-	S	-	-	-	Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
GGJMDCOG_01153	2.46e-48	-	-	-	-	-	-	-	-
GGJMDCOG_01154	0.0	-	-	-	P	ko:K06148	-	ko00000,ko02000	ABC transporter
GGJMDCOG_01155	1.58e-10	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
GGJMDCOG_01156	0.0	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
GGJMDCOG_01157	4.17e-314	yifK	-	-	E	ko:K03293	-	ko00000	Amino acid permease
GGJMDCOG_01158	8.21e-228	thyA	2.1.1.45	-	F	ko:K00560	ko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523	ko00000,ko00001,ko00002,ko01000	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
GGJMDCOG_01159	1.86e-117	folA	1.5.1.3	-	H	ko:K00287	ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523	ko00000,ko00001,ko00002,ko01000	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
GGJMDCOG_01160	0.0	aha1	-	-	P	ko:K12952	-	ko00000,ko01000	E1-E2 ATPase
GGJMDCOG_01161	5.41e-225	-	-	-	F	ko:K15051	-	ko00000	DNA/RNA non-specific endonuclease
GGJMDCOG_01162	2.16e-205	metQ	-	-	P	ko:K02073	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the nlpA lipoprotein family
GGJMDCOG_01163	3.87e-241	metN	-	-	P	ko:K02071	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
GGJMDCOG_01164	1.7e-117	metI	-	-	P	ko:K02072	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
GGJMDCOG_01165	0.0	fumC	4.2.1.2	-	C	ko:K01679	ko00020,ko00620,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko04934,ko05200,ko05211,map00020,map00620,map00720,map01100,map01110,map01120,map01130,map01200,map04934,map05200,map05211	ko00000,ko00001,ko00002,ko01000	Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
GGJMDCOG_01166	0.0	frdA	1.3.5.4	-	C	ko:K00244	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	ko00000,ko00001,ko00002,ko01000	FAD binding domain
GGJMDCOG_01167	1.66e-217	ldh	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	Belongs to the LDH MDH superfamily. LDH family
GGJMDCOG_01168	0.0	pepC4	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	Peptidase C1-like family
GGJMDCOG_01169	5.26e-171	-	-	-	H	-	-	-	Aldolase/RraA
GGJMDCOG_01170	0.0	citP	-	-	P	ko:K03319	-	ko00000	Sodium:sulfate symporter transmembrane region
GGJMDCOG_01171	5.95e-197	-	-	-	I	-	-	-	Alpha/beta hydrolase family
GGJMDCOG_01172	5.17e-249	citC	6.2.1.22	-	H	ko:K01910	ko02020,map02020	ko00000,ko00001,ko01000	Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
GGJMDCOG_01173	1.6e-59	citD	-	-	C	ko:K01646	ko02020,map02020	ko00000,ko00001	Covalent carrier of the coenzyme of citrate lyase
GGJMDCOG_01174	1.79e-214	citE	4.1.3.34	-	G	ko:K01644	ko02020,map02020	ko00000,ko00001,ko01000	Belongs to the HpcH HpaI aldolase family
GGJMDCOG_01175	0.0	citF	2.8.3.10	-	H	ko:K01643	ko02020,map02020	ko00000,ko00001,ko01000	Citrate (pro-3S)-lyase alpha chain
GGJMDCOG_01176	1.24e-93	ytwI	-	-	S	-	-	-	Protein of unknown function (DUF441)
GGJMDCOG_01177	9.9e-30	-	-	-	-	-	-	-	-
GGJMDCOG_01178	2.58e-189	cbiQ	-	-	P	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	cobalt transport
GGJMDCOG_01179	0.0	ykoD	-	-	P	ko:K16786,ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
GGJMDCOG_01180	5.38e-125	-	-	-	S	ko:K16924	-	ko00000,ko00002,ko02000	UPF0397 protein
GGJMDCOG_01181	8.1e-87	-	-	-	S	-	-	-	Domain of unknown function DUF1828
GGJMDCOG_01182	7.91e-14	-	-	-	-	-	-	-	-
GGJMDCOG_01183	2.41e-66	-	-	-	-	-	-	-	-
GGJMDCOG_01184	1.05e-226	citR	-	-	K	-	-	-	Putative sugar-binding domain
GGJMDCOG_01185	9.28e-317	-	-	-	S	-	-	-	Putative threonine/serine exporter
GGJMDCOG_01187	5.26e-15	-	-	-	-	-	-	-	-
GGJMDCOG_01188	1.3e-115	ybaK	-	-	S	ko:K03976	-	ko00000,ko01000,ko03016	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
GGJMDCOG_01189	4.8e-224	prmA	-	-	J	ko:K02687	-	ko00000,ko01000,ko03009	Ribosomal protein L11 methyltransferase
GGJMDCOG_01190	3.8e-80	-	-	-	-	-	-	-	-
GGJMDCOG_01191	0.0	relA	2.7.6.5	-	KT	ko:K00951	ko00230,map00230	ko00000,ko00001,ko01000	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
GGJMDCOG_01192	1.8e-99	dtd	-	-	J	ko:K07560	-	ko00000,ko01000,ko03016	rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
GGJMDCOG_01193	7.1e-311	hisS	6.1.1.21	-	J	ko:K01892	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	histidyl-tRNA synthetase
GGJMDCOG_01194	0.0	aspS	6.1.1.12	-	J	ko:K01876	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
GGJMDCOG_01195	5.51e-284	aspC	-	-	E	ko:K00841	ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase
GGJMDCOG_01196	4.66e-277	coaBC	4.1.1.36, 6.3.2.5	-	H	ko:K01598,ko:K13038	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
GGJMDCOG_01197	1.19e-43	-	-	-	S	-	-	-	reductase
GGJMDCOG_01198	2.98e-50	-	-	-	S	-	-	-	reductase
GGJMDCOG_01199	6.32e-41	-	-	-	S	-	-	-	reductase
GGJMDCOG_01200	1.83e-190	yxeH	-	-	S	-	-	-	hydrolase
GGJMDCOG_01201	1.14e-230	gyaR	1.1.1.26, 1.1.1.399, 1.1.1.95	-	CH	ko:K00015,ko:K00058	ko00260,ko00630,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00260,map00630,map00680,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
GGJMDCOG_01202	0.0	yhdG	-	-	E	ko:K03294	-	ko00000	Amino Acid
GGJMDCOG_01203	1.58e-140	yngC	-	-	S	-	-	-	SNARE associated Golgi protein
GGJMDCOG_01204	0.0	uvrC	-	-	L	ko:K03703	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
GGJMDCOG_01205	1.88e-309	obg	-	-	S	ko:K03979	-	ko00000,ko01000,ko03009	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
GGJMDCOG_01206	0.0	oatA	-	-	I	-	-	-	Acyltransferase
GGJMDCOG_01207	6.82e-223	rnz	3.1.26.11	-	J	ko:K00784	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
GGJMDCOG_01208	1.18e-183	-	-	-	S	ko:K07124	-	ko00000	Belongs to the short-chain dehydrogenases reductases (SDR) family
GGJMDCOG_01209	3.57e-47	-	-	-	S	-	-	-	Lipopolysaccharide assembly protein A domain
GGJMDCOG_01210	5.14e-38	rpmF	-	-	J	ko:K02911	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Belongs to the bacterial ribosomal protein bL32 family
GGJMDCOG_01211	0.0	yfkN	3.1.3.6, 3.1.4.16	-	F	ko:K01119	ko00230,ko00240,map00230,map00240	ko00000,ko00001,ko01000	Belongs to the 5'-nucleotidase family
GGJMDCOG_01212	1.25e-38	-	-	-	S	-	-	-	Protein of unknown function (DUF2929)
GGJMDCOG_01213	0.0	dnaE	2.7.7.7	-	L	ko:K02337	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase
GGJMDCOG_01214	5.46e-233	pfkA	2.7.1.11	-	F	ko:K00850	ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04152,ko05230,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04152,map05230	ko00000,ko00001,ko00002,ko01000,ko01009,ko03019	Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
GGJMDCOG_01215	0.0	pyk	2.7.1.40	-	G	ko:K00873	ko00010,ko00230,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko04930,ko05165,ko05203,ko05230,map00010,map00230,map00620,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map04930,map05165,map05203,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Belongs to the pyruvate kinase family
GGJMDCOG_01216	4.41e-216	yitL	-	-	S	ko:K00243	-	ko00000	S1 domain
GGJMDCOG_01217	5.77e-214	xerD	-	-	D	ko:K04763	-	ko00000,ko03036	recombinase XerD
GGJMDCOG_01218	4.62e-81	ribT	-	-	K	ko:K02859	-	ko00000	COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
GGJMDCOG_01219	1.81e-169	scpA	-	-	D	ko:K05896	-	ko00000,ko03036	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
GGJMDCOG_01220	7.57e-135	scpB	-	-	D	ko:K06024	-	ko00000,ko03036	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
GGJMDCOG_01221	4.65e-168	rluB	5.4.99.22	-	J	ko:K06178	-	ko00000,ko01000,ko03009	Belongs to the pseudouridine synthase RsuA family
GGJMDCOG_01222	1.93e-32	-	-	-	G	-	-	-	Peptidase_C39 like family
GGJMDCOG_01223	2.16e-207	-	-	-	M	-	-	-	NlpC/P60 family
GGJMDCOG_01224	6.67e-115	-	-	-	G	-	-	-	Peptidase_C39 like family
GGJMDCOG_01225	1.09e-223	pepI	3.4.11.5	-	E	ko:K01259	ko00330,map00330	ko00000,ko00001,ko01000,ko01002	Releases the N-terminal proline from various substrates
GGJMDCOG_01226	1.19e-114	-	-	-	P	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Cobalt transport protein
GGJMDCOG_01227	0.0	-	-	-	S	ko:K16786,ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
GGJMDCOG_01228	5.75e-284	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
GGJMDCOG_01230	0.0	cas9	-	-	L	ko:K09952	-	ko00000,ko01000,ko02048	CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
GGJMDCOG_01231	8.49e-146	ribU	-	-	U	-	-	-	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
GGJMDCOG_01232	1.13e-41	-	-	-	M	-	-	-	Lysin motif
GGJMDCOG_01233	1.96e-148	cmk	2.7.4.25	-	F	ko:K00945	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the cytidylate kinase family. Type 1 subfamily
GGJMDCOG_01234	1.4e-281	rpsA	-	-	J	ko:K02945	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein S1
GGJMDCOG_01235	1.34e-314	der	-	-	S	ko:K03977	-	ko00000,ko03009	GTPase that plays an essential role in the late steps of ribosome biogenesis
GGJMDCOG_01236	1.17e-56	hup	-	-	L	ko:K03530	-	ko00000,ko03032,ko03036,ko03400	Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
GGJMDCOG_01237	3.52e-293	XK27_05225	-	-	S	-	-	-	Tetratricopeptide repeat protein
GGJMDCOG_01238	0.0	cls	-	-	I	ko:K06131	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
GGJMDCOG_01239	9.41e-285	-	-	-	V	-	-	-	ABC transporter transmembrane region
GGJMDCOG_01240	2.14e-104	-	-	-	S	-	-	-	AAA domain
GGJMDCOG_01241	6.97e-53	-	-	-	F	-	-	-	NUDIX domain
GGJMDCOG_01242	4.87e-187	-	-	-	F	-	-	-	Phosphorylase superfamily
GGJMDCOG_01243	2.81e-189	-	2.3.1.81	-	V	ko:K00662	-	ko00000,ko01000,ko01504	Aminoglycoside 3-N-acetyltransferase
GGJMDCOG_01244	2.25e-125	yagE	-	-	E	-	-	-	Amino acid permease
GGJMDCOG_01245	1.11e-41	yagE	-	-	E	-	-	-	Amino acid permease
GGJMDCOG_01246	2.75e-111	-	3.4.21.96	-	S	ko:K01361	-	ko00000,ko01000,ko01002,ko03110	SLAP domain
GGJMDCOG_01247	1.22e-129	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
GGJMDCOG_01250	4.09e-61	-	-	-	S	-	-	-	Short C-terminal domain
GGJMDCOG_01251	1.57e-87	-	-	-	K	-	-	-	Peptidase S24-like
GGJMDCOG_01252	2.97e-15	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
GGJMDCOG_01259	2.38e-28	-	-	-	L	-	-	-	Psort location Cytoplasmic, score
GGJMDCOG_01276	4.84e-221	terL	-	-	S	-	-	-	overlaps another CDS with the same product name
GGJMDCOG_01278	6.21e-116	-	-	-	S	-	-	-	Phage portal protein
GGJMDCOG_01279	2.11e-56	-	-	-	S	-	-	-	Clp protease
GGJMDCOG_01280	1.68e-99	-	-	-	S	-	-	-	Phage capsid family
GGJMDCOG_01283	3.91e-38	-	-	-	S	-	-	-	Bacteriophage HK97-gp10, putative tail-component
GGJMDCOG_01288	1.32e-219	-	-	-	D	-	-	-	domain protein
GGJMDCOG_01290	1.35e-204	-	-	-	S	-	-	-	Phage minor structural protein
GGJMDCOG_01300	2.78e-131	-	-	-	M	-	-	-	hydrolase, family 25
GGJMDCOG_01301	2.81e-203	XK27_10395	-	-	S	-	-	-	Uncharacterised 5xTM membrane BCR, YitT family COG1284
GGJMDCOG_01302	5.13e-287	cca	2.7.7.72	-	J	ko:K00974	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
GGJMDCOG_01303	1.8e-143	hlyIII	-	-	S	ko:K11068	-	ko00000,ko02042	protein, hemolysin III
GGJMDCOG_01304	8.63e-191	degV3	-	-	S	-	-	-	Uncharacterised protein, DegV family COG1307
GGJMDCOG_01305	9.85e-49	yozE	-	-	S	-	-	-	Belongs to the UPF0346 family
GGJMDCOG_01306	3.67e-88	-	-	-	P	-	-	-	NhaP-type Na H and K H
GGJMDCOG_01307	7.2e-49	nhaP4	-	-	P	ko:K03316	-	ko00000	Sodium proton antiporter
GGJMDCOG_01308	2.4e-118	nhaP4	-	-	P	ko:K03316	-	ko00000	Sodium proton antiporter
GGJMDCOG_01309	1.06e-198	rbgA	-	-	S	ko:K14540	-	ko00000,ko03009	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
GGJMDCOG_01310	1.73e-169	rnhB	3.1.26.4	-	L	ko:K03470	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
GGJMDCOG_01311	1.23e-194	dprA	-	-	LU	ko:K04096	-	ko00000	DNA protecting protein DprA
GGJMDCOG_01312	0.0	topA	5.99.1.2	-	L	ko:K03168	-	ko00000,ko01000,ko03032,ko03400	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
GGJMDCOG_01313	1.42e-315	trmFO	2.1.1.74	-	J	ko:K04094	-	ko00000,ko01000,ko03016,ko03036	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
GGJMDCOG_01314	7.31e-181	xerC	-	-	D	ko:K03733,ko:K04763	-	ko00000,ko03036	Phage integrase, N-terminal SAM-like domain
GGJMDCOG_01315	4.67e-116	hslV	3.4.25.2	-	O	ko:K01419	-	ko00000,ko01000,ko01002	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
GGJMDCOG_01316	8.06e-313	hslU	-	-	O	ko:K03667	-	ko00000,ko03110	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
GGJMDCOG_01317	3.83e-231	lacX	5.1.3.3	-	G	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Aldose 1-epimerase
GGJMDCOG_01318	1.19e-97	-	-	-	C	-	-	-	Aldo keto reductase
GGJMDCOG_01319	6.38e-59	-	-	-	S	-	-	-	aldo-keto reductase (NADP) activity
GGJMDCOG_01320	5.61e-124	-	-	-	M	-	-	-	LysM domain protein
GGJMDCOG_01321	5.49e-197	-	-	-	L	-	-	-	Phage integrase, N-terminal SAM-like domain
GGJMDCOG_01322	9.93e-72	crcB1	-	-	U	ko:K06199	-	ko00000,ko02000	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
GGJMDCOG_01323	2.95e-84	crcB	-	-	U	ko:K06199	-	ko00000,ko02000	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
GGJMDCOG_01324	1.31e-16	mmuM	2.1.1.10	-	H	ko:K00547	ko00270,ko01100,ko01110,map00270,map01100,map01110	ko00000,ko00001,ko01000	homocysteine S-methyltransferase
GGJMDCOG_01325	3.03e-145	ybgF	-	-	E	ko:K02205,ko:K03293,ko:K16235,ko:K16236	-	ko00000,ko02000	amino acid
GGJMDCOG_01326	0.0	pepV	3.5.1.18	-	E	ko:K01270,ko:K01274,ko:K01439	ko00300,ko00480,ko01100,ko01120,ko01230,map00300,map00480,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000,ko01002	dipeptidase PepV
GGJMDCOG_01327	7.88e-121	-	-	-	C	-	-	-	Pyridoxamine 5'-phosphate oxidase
GGJMDCOG_01328	0.0	-	-	-	E	-	-	-	Amino acid permease
GGJMDCOG_01329	0.0	speA	4.1.1.17, 4.1.1.18, 4.1.1.19	-	E	ko:K01581,ko:K01582,ko:K01585	ko00310,ko00330,ko00480,ko00960,ko01100,ko01110,ko01130,map00310,map00330,map00480,map00960,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Orn/Lys/Arg decarboxylase, C-terminal domain
GGJMDCOG_01330	4.97e-311	ynbB	-	-	P	-	-	-	aluminum resistance
GGJMDCOG_01331	0.0	recQ	3.6.4.12	-	L	ko:K03654	ko03018,map03018	ko00000,ko00001,ko01000,ko03400	ATP-dependent DNA helicase RecQ
GGJMDCOG_01332	3.6e-106	-	-	-	C	-	-	-	Flavodoxin
GGJMDCOG_01333	0.0	uvrA2	-	-	L	ko:K03701	ko03420,map03420	ko00000,ko00001,ko03400	excinuclease ABC, A subunit
GGJMDCOG_01334	2.25e-241	mmuM	2.1.1.10	-	H	ko:K00547	ko00270,ko01100,ko01110,map00270,map01100,map01110	ko00000,ko00001,ko01000	homocysteine S-methyltransferase
GGJMDCOG_01335	5.94e-148	-	-	-	I	-	-	-	Acid phosphatase homologues
GGJMDCOG_01336	4.87e-262	-	-	-	L	-	-	-	COG2826 Transposase and inactivated derivatives, IS30 family
GGJMDCOG_01337	1.12e-104	yvbK	-	-	K	-	-	-	COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
GGJMDCOG_01338	1.12e-149	maa3	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	transferase hexapeptide repeat
GGJMDCOG_01339	1.59e-259	pbpX1	-	-	V	-	-	-	Beta-lactamase
GGJMDCOG_01340	3.1e-127	pdxK	2.7.1.35	-	H	ko:K00868	ko00750,ko01100,map00750,map01100	ko00000,ko00001,ko01000	Phosphomethylpyrimidine kinase
GGJMDCOG_01341	7.89e-124	-	-	-	S	-	-	-	ECF-type riboflavin transporter, S component
GGJMDCOG_01342	1.87e-290	-	-	-	S	-	-	-	Putative peptidoglycan binding domain
GGJMDCOG_01343	5.74e-108	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
GGJMDCOG_01344	0.0	yqjE	3.4.11.14, 3.4.11.4	-	E	ko:K01258,ko:K01263	-	ko00000,ko01000,ko01002	Cleaves the N-terminal amino acid of tripeptides
GGJMDCOG_01345	6.84e-243	-	-	-	L	ko:K07478	-	ko00000	AAA C-terminal domain
GGJMDCOG_01346	1.12e-85	spxA	-	-	K	ko:K16509	-	ko00000	Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
GGJMDCOG_01347	0.0	treB	-	-	G	ko:K02755,ko:K02756,ko:K02757	ko02060,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
GGJMDCOG_01348	4.21e-129	treR	-	-	K	ko:K03486	-	ko00000,ko03000	UTRA
GGJMDCOG_01349	0.0	treC	3.2.1.93	GH13	G	ko:K01226	ko00500,map00500	ko00000,ko00001,ko01000	Alpha amylase, catalytic domain protein
GGJMDCOG_01351	1.65e-303	-	-	-	G	ko:K02027	-	ko00000,ko00002,ko02000	Bacterial extracellular solute-binding protein
GGJMDCOG_01352	1.43e-80	-	-	-	S	ko:K07006	-	ko00000	Pyridoxamine 5'-phosphate oxidase
GGJMDCOG_01353	5.93e-302	XK27_01810	-	-	S	-	-	-	Calcineurin-like phosphoesterase
GGJMDCOG_01355	0.0	-	-	-	S	-	-	-	SLAP domain
GGJMDCOG_01356	0.0	hsdR	3.1.21.3	-	L	ko:K01153	-	ko00000,ko01000,ko02048	DEAD/DEAH box helicase
GGJMDCOG_01357	4.29e-275	-	-	-	S	ko:K06926	-	ko00000	AAA domain, putative AbiEii toxin, Type IV TA system
GGJMDCOG_01358	0.0	hsdM	2.1.1.72	-	V	ko:K03427	-	ko00000,ko01000,ko02048	type I restriction-modification system
GGJMDCOG_01359	1e-156	-	3.1.21.3	-	V	ko:K01154	-	ko00000,ko01000,ko02048	Type I restriction modification DNA specificity domain
GGJMDCOG_01360	4.43e-94	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
GGJMDCOG_01361	5.34e-133	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
GGJMDCOG_01362	1.04e-144	-	-	-	S	ko:K07459	-	ko00000	AAA domain, putative AbiEii toxin, Type IV TA system
GGJMDCOG_01363	1.3e-62	-	-	-	L	-	-	-	DNA helicase
GGJMDCOG_01364	6.75e-101	-	-	-	S	-	-	-	HIRAN
GGJMDCOG_01365	8.53e-45	-	-	-	-	-	-	-	-
GGJMDCOG_01366	3.02e-232	-	-	-	-	-	-	-	-
GGJMDCOG_01367	5.77e-127	-	-	-	S	-	-	-	AAA domain
GGJMDCOG_01368	8.99e-100	-	-	-	S	ko:K07126	-	ko00000	Sel1-like repeats.
GGJMDCOG_01369	5.56e-07	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
GGJMDCOG_01370	3.15e-132	psd	4.1.1.65	-	I	ko:K01613	ko00564,ko01100,ko01110,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Belongs to the phosphatidylserine decarboxylase family
GGJMDCOG_01371	1.61e-70	-	-	-	-	-	-	-	-
GGJMDCOG_01372	0.0	fhs	6.3.4.3	-	F	ko:K01938	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Belongs to the formate--tetrahydrofolate ligase family
GGJMDCOG_01373	3.16e-102	lspA	3.4.23.36	-	MU	ko:K03101	ko03060,map03060	ko00000,ko00001,ko01000,ko01002	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
GGJMDCOG_01374	3.24e-221	rluD	5.4.99.23	-	J	ko:K06180	-	ko00000,ko01000,ko03009	Responsible for synthesis of pseudouridine from uracil
GGJMDCOG_01375	4.13e-255	carA	6.3.5.5	-	F	ko:K01956	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthetase glutamine chain
GGJMDCOG_01376	0.0	carB1	6.3.5.5	-	F	ko:K01955	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthase
GGJMDCOG_01377	0.0	FbpA	-	-	K	-	-	-	Fibronectin-binding protein
GGJMDCOG_01378	2.06e-88	-	-	-	-	-	-	-	-
GGJMDCOG_01379	3.31e-204	-	-	-	S	-	-	-	EDD domain protein, DegV family
GGJMDCOG_01380	0.0	mutS1	-	-	L	ko:K07456	ko03430,map03430	ko00000,ko00001,ko03400	Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
GGJMDCOG_01381	1.24e-258	xerS	-	-	L	ko:K03733	-	ko00000,ko03036	Belongs to the 'phage' integrase family
GGJMDCOG_01382	1.5e-90	-	-	-	-	-	-	-	-
GGJMDCOG_01383	4.36e-142	XK27_00160	-	-	S	-	-	-	Domain of unknown function (DUF5052)
GGJMDCOG_01384	3.35e-269	-	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
GGJMDCOG_01385	5.57e-22	-	-	-	S	-	-	-	Protein of unknown function (DUF1275)
GGJMDCOG_01386	4.52e-114	-	-	-	S	-	-	-	Protein of unknown function (DUF1275)
GGJMDCOG_01387	5.03e-76	-	-	-	K	-	-	-	Helix-turn-helix domain
GGJMDCOG_01388	1.17e-144	ppiB	5.2.1.8	-	G	ko:K03768	-	ko00000,ko01000,ko03110	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
GGJMDCOG_01389	1.05e-221	ppaC	3.6.1.1	-	C	ko:K15986	ko00190,map00190	ko00000,ko00001,ko01000	inorganic pyrophosphatase
GGJMDCOG_01390	1.11e-234	-	-	-	K	-	-	-	Transcriptional regulator
GGJMDCOG_01391	0.0	parC	-	-	L	ko:K02621	-	ko00000,ko01000,ko02048,ko03032,ko03036	Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
GGJMDCOG_01392	0.0	parE	-	-	L	ko:K02622	-	ko00000,ko01000,ko02048,ko03032,ko03036	Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
GGJMDCOG_01393	9.39e-141	plsY	2.3.1.15	-	I	ko:K08591	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
GGJMDCOG_01394	0.0	snf	-	-	KL	-	-	-	domain protein
GGJMDCOG_01395	1.73e-48	-	-	-	-	-	-	-	-
GGJMDCOG_01396	1.24e-08	-	-	-	-	-	-	-	-
GGJMDCOG_01397	4.83e-136	pncA	-	-	Q	-	-	-	Isochorismatase family
GGJMDCOG_01398	1.51e-159	-	-	-	-	-	-	-	-
GGJMDCOG_01401	4.13e-83	-	-	-	-	-	-	-	-
GGJMDCOG_01402	3.56e-47	-	-	-	-	-	-	-	-
GGJMDCOG_01405	4.45e-42	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2188)
GGJMDCOG_01406	5.4e-36	-	-	-	-	-	-	-	-
GGJMDCOG_01407	9.12e-282	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
GGJMDCOG_01408	9.91e-150	-	3.6.1.66	-	F	ko:K02428	ko00230,map00230	ko00000,ko00001,ko01000	Ham1 family
GGJMDCOG_01409	9.67e-104	-	-	-	-	-	-	-	-
GGJMDCOG_01410	1.93e-308	cpdA	-	-	S	-	-	-	Calcineurin-like phosphoesterase
GGJMDCOG_01411	1.68e-277	ypsC	-	-	L	ko:K07444	-	ko00000,ko01000	Belongs to the methyltransferase superfamily
GGJMDCOG_01412	1.85e-90	gpsB	-	-	D	-	-	-	Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
GGJMDCOG_01413	1.18e-139	ypsA	-	-	S	-	-	-	Belongs to the UPF0398 family
GGJMDCOG_01414	8.47e-152	recU	-	-	L	ko:K03700	-	ko00000,ko03400	Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
GGJMDCOG_01415	0.0	ponA	2.4.1.129, 3.4.16.4	GT51	M	ko:K05366	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01003,ko01011	penicillin-binding protein 1A
GGJMDCOG_01416	5.5e-148	nth	4.2.99.18	-	L	ko:K10773	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
GGJMDCOG_01417	6.91e-149	dnaD	-	-	L	ko:K02086	-	ko00000	DnaD domain protein
GGJMDCOG_01418	0.0	asnS	6.1.1.22	-	J	ko:K01893	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Asparaginyl-tRNA synthetase
GGJMDCOG_01419	9.62e-116	ypmB	-	-	S	-	-	-	Protein conserved in bacteria
GGJMDCOG_01420	0.0	dinG	3.6.4.12	-	L	ko:K03722	-	ko00000,ko01000,ko03400	helicase involved in DNA repair and perhaps also replication
GGJMDCOG_01421	0.0	addA	3.6.4.12	-	L	ko:K16898	-	ko00000,ko01000,ko03400	ATP-dependent helicase nuclease subunit A
GGJMDCOG_01422	0.0	rexB	3.6.4.12	-	L	ko:K16899	-	ko00000,ko01000,ko03400	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
GGJMDCOG_01423	3.02e-173	mvk	2.7.1.36	-	I	ko:K00869	ko00900,ko01100,ko01110,ko01130,ko04146,map00900,map01100,map01110,map01130,map04146	ko00000,ko00001,ko00002,ko01000	GHMP kinases N terminal domain
GGJMDCOG_01424	5.87e-228	mvaD	4.1.1.33	-	I	ko:K01597	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	diphosphomevalonate decarboxylase
GGJMDCOG_01425	6.67e-261	mvaK2	2.7.4.2	-	I	ko:K00938	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	phosphomevalonate kinase
GGJMDCOG_01426	4.87e-236	fni	5.3.3.2	-	C	ko:K01823	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
GGJMDCOG_01427	1.28e-150	-	3.1.3.102, 3.1.3.104, 3.1.3.23	-	G	ko:K07757,ko:K20861	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Sucrose-6F-phosphate phosphohydrolase
GGJMDCOG_01428	0.0	rsmF	-	-	J	-	-	-	NOL1 NOP2 sun family protein
GGJMDCOG_01429	4.4e-215	-	-	-	-	-	-	-	-
GGJMDCOG_01430	4.01e-184	-	-	-	-	-	-	-	-
GGJMDCOG_01431	1.27e-133	lepB	3.4.21.89	-	U	ko:K03100	ko02024,ko03060,map02024,map03060	ko00000,ko00001,ko01000,ko01002	Belongs to the peptidase S26 family
GGJMDCOG_01432	3.49e-36	-	-	-	-	-	-	-	-
GGJMDCOG_01433	3.85e-193	-	-	-	-	-	-	-	-
GGJMDCOG_01434	2.54e-176	-	-	-	-	-	-	-	-
GGJMDCOG_01435	1.65e-180	-	-	-	-	-	-	-	-
GGJMDCOG_01436	1.33e-161	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
GGJMDCOG_01437	1.25e-80	lexA	-	-	K	ko:K07979	-	ko00000,ko03000	Transcriptional regulator, GntR family
GGJMDCOG_01438	2.86e-307	pepT	3.4.11.4	-	E	ko:K01258	-	ko00000,ko01000,ko01002	Cleaves the N-terminal amino acid of tripeptides
GGJMDCOG_01439	8.12e-196	yqfO	-	-	S	-	-	-	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
GGJMDCOG_01440	2.8e-159	trmK	2.1.1.217	-	S	ko:K06967	-	ko00000,ko01000,ko03016	SAM-dependent methyltransferase
GGJMDCOG_01441	5.37e-106	-	3.6.1.55	-	F	ko:K03574	-	ko00000,ko01000,ko03400	NUDIX domain
GGJMDCOG_01442	4.34e-166	-	-	-	S	-	-	-	Peptidase family M23
GGJMDCOG_01443	9e-255	sigA	-	-	K	ko:K03086	-	ko00000,ko03021	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
GGJMDCOG_01444	0.0	dnaG	-	-	L	ko:K02316	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
GGJMDCOG_01445	0.0	glyS	6.1.1.14	-	J	ko:K01879	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Glycyl-tRNA synthetase beta subunit
GGJMDCOG_01446	9.03e-229	glyQ	6.1.1.14	-	J	ko:K01878	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	glycyl-tRNA synthetase alpha subunit
GGJMDCOG_01447	4.11e-173	recO	-	-	L	ko:K03584	ko03440,map03440	ko00000,ko00001,ko03400	Involved in DNA repair and RecF pathway recombination
GGJMDCOG_01448	1.37e-216	era	-	-	S	ko:K03595	-	ko00000,ko03009,ko03029	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
GGJMDCOG_01449	3.58e-129	ybeY	-	-	S	ko:K07042	-	ko00000,ko03009	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
GGJMDCOG_01450	1.74e-224	phoH	-	-	T	ko:K06217	-	ko00000	phosphate starvation-inducible protein PhoH
GGJMDCOG_01451	1.08e-92	yqeY	-	-	S	ko:K09117	-	ko00000	YqeY-like protein
GGJMDCOG_01452	4.83e-30	rpsU	-	-	J	ko:K02970	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bS21 family
GGJMDCOG_01453	6.94e-199	yqfL	2.7.11.33, 2.7.4.28	-	F	ko:K09773	-	ko00000,ko01000	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
GGJMDCOG_01454	1.34e-22	-	-	-	S	-	-	-	CRISPR-associated protein (Cas_Csn2)
GGJMDCOG_01455	1.05e-222	-	-	-	K	-	-	-	helix_turn_helix, arabinose operon control protein
GGJMDCOG_01456	9.49e-207	htpX	-	-	O	ko:K03799	-	ko00000,ko00002,ko01000,ko01002	Belongs to the peptidase M48B family
GGJMDCOG_01457	1.43e-125	lemA	-	-	S	ko:K03744	-	ko00000	LemA family
GGJMDCOG_01458	7.23e-244	ysdE	-	-	P	-	-	-	Citrate transporter
GGJMDCOG_01459	3.34e-92	-	-	-	S	-	-	-	Iron-sulphur cluster biosynthesis
GGJMDCOG_01460	0.0	glpQ	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	Membrane domain of glycerophosphoryl diester phosphodiesterase
GGJMDCOG_01461	9.69e-25	-	-	-	-	-	-	-	-
GGJMDCOG_01462	2e-149	-	-	-	S	-	-	-	Peptidase family M23
GGJMDCOG_01463	1.22e-136	msrA	1.8.4.11, 1.8.4.12	-	O	ko:K07304,ko:K12267	-	ko00000,ko01000	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
GGJMDCOG_01465	2.83e-205	yitT	-	-	S	-	-	-	Uncharacterised 5xTM membrane BCR, YitT family COG1284
GGJMDCOG_01466	5.47e-151	-	-	-	-	-	-	-	-
GGJMDCOG_01467	3.06e-202	thrB	2.7.1.39	-	F	ko:K00872	ko00260,ko01100,ko01110,ko01120,ko01230,map00260,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
GGJMDCOG_01468	2.95e-283	hom	1.1.1.3	-	E	ko:K00003	ko00260,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00270,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	homoserine dehydrogenase
GGJMDCOG_01469	0.0	thrC	4.2.3.1	-	E	ko:K01733	ko00260,ko00750,ko01100,ko01110,ko01120,ko01230,map00260,map00750,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Threonine synthase
GGJMDCOG_01470	0.0	lysC	2.7.2.4	-	E	ko:K00928	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the aspartokinase family
GGJMDCOG_01471	6.83e-133	yrgI	5.4.2.11	-	G	ko:K01834	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Histidine phosphatase superfamily (branch 1)
GGJMDCOG_01472	0.0	-	-	-	L	-	-	-	PLD-like domain
GGJMDCOG_01473	5.97e-55	-	-	-	S	-	-	-	SnoaL-like domain
GGJMDCOG_01474	6.13e-70	-	-	-	K	-	-	-	sequence-specific DNA binding
GGJMDCOG_01475	8.71e-31	-	-	-	G	-	-	-	Ribose/Galactose Isomerase
GGJMDCOG_01476	5.51e-35	-	-	-	-	-	-	-	-
GGJMDCOG_01477	1.15e-64	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
GGJMDCOG_01478	0.0	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
GGJMDCOG_01479	8.93e-108	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
GGJMDCOG_01480	5.73e-153	-	-	-	-	-	-	-	-
GGJMDCOG_01481	5.04e-154	-	-	-	G	-	-	-	Antibiotic biosynthesis monooxygenase
GGJMDCOG_01482	1.13e-126	-	-	-	-	-	-	-	-
GGJMDCOG_01483	6.93e-140	-	-	-	K	-	-	-	LysR substrate binding domain
GGJMDCOG_01484	4.04e-29	-	-	-	-	-	-	-	-
GGJMDCOG_01485	1.07e-287	-	-	-	S	-	-	-	Sterol carrier protein domain
GGJMDCOG_01486	1.76e-122	citX	2.7.7.61	-	HI	ko:K05964	ko02020,map02020	ko00000,ko00001,ko01000	Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase
GGJMDCOG_01487	2.01e-135	arcC	2.7.2.2	-	E	ko:K00926	ko00220,ko00230,ko00910,ko01100,ko01120,ko01200,map00220,map00230,map00910,map01100,map01120,map01200	ko00000,ko00001,ko01000	Belongs to the carbamate kinase family
GGJMDCOG_01488	5.39e-84	argF	2.1.3.3	-	E	ko:K00611	ko00220,ko01100,ko01110,ko01130,ko01230,map00220,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
GGJMDCOG_01489	2.06e-298	arcA	3.5.3.6	-	E	ko:K01478	ko00220,ko01100,ko01110,ko01130,map00220,map01100,map01110,map01130	ko00000,ko00001,ko01000	Arginine
GGJMDCOG_01490	3.03e-177	lysR5	-	-	K	-	-	-	LysR substrate binding domain
GGJMDCOG_01491	0.0	-	-	-	P	-	-	-	Cation transporter/ATPase, N-terminus
GGJMDCOG_01492	4.97e-64	-	-	-	S	-	-	-	Metal binding domain of Ada
GGJMDCOG_01493	5.01e-55	ybhL	-	-	S	ko:K06890	-	ko00000	Belongs to the BI1 family
GGJMDCOG_01495	4.39e-268	-	-	-	S	ko:K09963	-	ko00000	Bacterial protein of unknown function (DUF871)
GGJMDCOG_01496	1.15e-121	apt	2.4.2.7	-	F	ko:K00759	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000,ko04147	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
GGJMDCOG_01497	0.0	recJ	-	-	L	ko:K07462	ko03410,ko03430,ko03440,map03410,map03430,map03440	ko00000,ko00001,ko01000,ko03400	Single-stranded-DNA-specific exonuclease RecJ
GGJMDCOG_01498	7e-131	srtA	3.4.22.70	-	M	ko:K07284	-	ko00000,ko01000,ko01002,ko01011	sortase family
GGJMDCOG_01499	9.71e-47	-	-	-	T	ko:K07171	-	ko00000,ko01000,ko02048	PemK-like, MazF-like toxin of type II toxin-antitoxin system
GGJMDCOG_01500	5.3e-32	-	-	-	-	-	-	-	-
GGJMDCOG_01501	4.51e-60	-	-	-	M	-	-	-	Glycosyl hydrolases family 25
GGJMDCOG_01502	1.54e-112	-	-	-	M	-	-	-	Glycosyl hydrolases family 25
GGJMDCOG_01503	1.76e-38	-	-	-	-	-	-	-	-
GGJMDCOG_01504	6.31e-27	-	-	-	-	-	-	-	-
GGJMDCOG_01507	2.12e-27	-	-	-	S	-	-	-	Phage uncharacterised protein (Phage_XkdX)
GGJMDCOG_01508	1.28e-54	-	-	-	-	-	-	-	-
GGJMDCOG_01514	8.2e-07	-	-	-	-	-	-	-	-
GGJMDCOG_01516	3.71e-154	-	-	-	S	-	-	-	Baseplate J-like protein
GGJMDCOG_01517	2.37e-43	-	-	-	-	-	-	-	-
GGJMDCOG_01518	4.6e-63	-	-	-	-	-	-	-	-
GGJMDCOG_01519	9e-128	-	-	-	-	-	-	-	-
GGJMDCOG_01520	6.91e-61	-	-	-	-	-	-	-	-
GGJMDCOG_01521	1.19e-68	-	-	-	M	-	-	-	LysM domain
GGJMDCOG_01522	0.0	-	-	-	L	-	-	-	Phage tail tape measure protein TP901
GGJMDCOG_01525	1.1e-72	-	-	-	-	-	-	-	-
GGJMDCOG_01526	7.86e-194	-	-	-	S	-	-	-	Protein of unknown function (DUF3383)
GGJMDCOG_01527	7.95e-69	-	-	-	-	-	-	-	-
GGJMDCOG_01528	1.8e-59	-	-	-	-	-	-	-	-
GGJMDCOG_01529	2.18e-96	-	-	-	-	-	-	-	-
GGJMDCOG_01531	1.83e-181	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2184)
GGJMDCOG_01532	5.09e-76	-	-	-	-	-	-	-	-
GGJMDCOG_01533	2.77e-137	-	-	-	S	ko:K09960	-	ko00000	Uncharacterized protein conserved in bacteria (DUF2213)
GGJMDCOG_01534	1.14e-16	-	-	-	S	-	-	-	Lysin motif
GGJMDCOG_01535	5.89e-127	-	-	-	S	-	-	-	Phage Mu protein F like protein
GGJMDCOG_01536	2.28e-178	-	-	-	S	ko:K09961	-	ko00000	Protein of unknown function (DUF1073)
GGJMDCOG_01537	1.1e-235	-	-	-	S	-	-	-	Terminase-like family
GGJMDCOG_01538	1.22e-24	-	-	-	S	-	-	-	Terminase-like family
GGJMDCOG_01539	3.14e-48	-	-	-	L	ko:K07474	-	ko00000	Terminase small subunit
GGJMDCOG_01540	7.69e-16	-	-	-	N	-	-	-	HicA toxin of bacterial toxin-antitoxin,
GGJMDCOG_01541	1.12e-45	-	-	-	S	-	-	-	HicB_like antitoxin of bacterial toxin-antitoxin system
GGJMDCOG_01550	1.08e-10	-	-	-	-	-	-	-	-
GGJMDCOG_01551	5.99e-52	-	-	-	L	-	-	-	Endodeoxyribonuclease RusA
GGJMDCOG_01557	8.93e-64	-	-	-	L	ko:K02315	-	ko00000,ko03032	IstB-like ATP binding protein
GGJMDCOG_01558	3.2e-41	-	-	-	S	-	-	-	Conserved phage C-terminus (Phg_2220_C)
GGJMDCOG_01559	1.11e-70	-	-	-	S	-	-	-	Protein of unknown function (DUF1071)
GGJMDCOG_01563	2.36e-08	-	-	-	K	-	-	-	DNA-binding protein
GGJMDCOG_01569	5.23e-122	-	-	-	S	-	-	-	AntA/AntB antirepressor
GGJMDCOG_01570	8.72e-07	-	-	-	-	-	-	-	-
GGJMDCOG_01575	1.71e-102	-	-	-	S	-	-	-	DNA binding
GGJMDCOG_01576	1.21e-16	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
GGJMDCOG_01577	7e-19	-	-	-	K	-	-	-	Cro/C1-type HTH DNA-binding domain
GGJMDCOG_01583	1.09e-226	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
GGJMDCOG_01584	0.0	lepA	-	-	M	ko:K03596	ko05134,map05134	ko00000,ko00001	Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
GGJMDCOG_01585	6.87e-277	dnaJ	-	-	O	ko:K03686	-	ko00000,ko03029,ko03110	ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
GGJMDCOG_01586	0.0	dnaK	-	-	O	ko:K04043	ko03018,ko04212,ko05152,map03018,map04212,map05152	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	Heat shock 70 kDa protein
GGJMDCOG_01587	3.74e-109	grpE	-	-	O	ko:K03687	-	ko00000,ko03029,ko03110	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
GGJMDCOG_01588	9.98e-246	hrcA	-	-	K	ko:K03705	-	ko00000,ko03000	Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
GGJMDCOG_01589	5.35e-223	ribF	2.7.1.26, 2.7.7.2	-	H	ko:K11753	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Belongs to the ribF family
GGJMDCOG_01590	1.64e-198	truB	5.4.99.25	-	J	ko:K03177,ko:K03483	-	ko00000,ko01000,ko03000,ko03016	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
GGJMDCOG_01591	1.67e-79	rbfA	-	-	J	ko:K02834	-	ko00000,ko03009	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
GGJMDCOG_01592	0.0	infB	-	-	J	ko:K02519	-	ko00000,ko03012,ko03029	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
GGJMDCOG_01593	1.61e-64	ylxQ	-	-	J	-	-	-	ribosomal protein
GGJMDCOG_01594	3.75e-63	ylxR	-	-	K	ko:K07742	-	ko00000	Protein of unknown function (DUF448)
GGJMDCOG_01595	1.19e-259	nusA	-	-	K	ko:K02600	-	ko00000,ko03009,ko03021	Participates in both transcription termination and antitermination
GGJMDCOG_01596	3.4e-108	rimP	-	-	J	ko:K09748	-	ko00000,ko03009	Required for maturation of 30S ribosomal subunits
GGJMDCOG_01597	0.0	polC	2.7.7.7	-	L	ko:K03763	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
GGJMDCOG_01598	0.0	proS	6.1.1.15	-	J	ko:K01881	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
GGJMDCOG_01599	6.38e-254	rseP	-	-	M	ko:K11749	ko02024,ko04112,map02024,map04112	ko00000,ko00001,ko01000,ko01002	zinc metalloprotease
GGJMDCOG_01600	3.93e-181	cdsA	2.7.7.41	-	I	ko:K00981	ko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070	ko00000,ko00001,ko00002,ko01000	Belongs to the CDS family
GGJMDCOG_01601	6.38e-178	uppS	2.5.1.31	-	H	ko:K00806	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
GGJMDCOG_01602	1.22e-121	frr	-	-	J	ko:K02838	-	ko00000,ko03012	Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
GGJMDCOG_01603	5.86e-168	pyrH	2.7.4.22	-	F	ko:K09903	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphorylation of UMP to UDP
GGJMDCOG_01604	1.76e-235	tsf	-	-	J	ko:K02357	-	ko00000,ko03012,ko03029	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
GGJMDCOG_01605	2.21e-180	rpsB	-	-	J	ko:K02967	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uS2 family
GGJMDCOG_01606	2.03e-251	yabB	2.1.1.223	-	L	ko:K07461,ko:K15460	-	ko00000,ko01000,ko03016	Methyltransferase small domain
GGJMDCOG_01607	1.65e-151	plsC	2.3.1.51	-	I	ko:K00655	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Acyltransferase
GGJMDCOG_01608	8.61e-296	cfa	2.1.1.79	-	M	ko:K00574	-	ko00000,ko01000	cyclopropane-fatty-acyl-phospholipid synthase
GGJMDCOG_01609	0.0	pepO	-	-	O	ko:K07386	-	ko00000,ko01000,ko01002	Peptidase family M13
GGJMDCOG_01610	0.0	mdlB	-	-	V	ko:K06147,ko:K18890	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
GGJMDCOG_01611	0.0	mdlA	-	-	V	ko:K06148,ko:K18889	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
GGJMDCOG_01612	1.3e-40	XK26_06720	-	-	S	ko:K09976	-	ko00000	Uncharacterised protein family (UPF0154)
GGJMDCOG_01613	4.16e-51	ynzC	-	-	S	-	-	-	UPF0291 protein
GGJMDCOG_01614	9.86e-146	lexA	3.4.21.88	-	K	ko:K01356	-	ko00000,ko00002,ko01000,ko01002,ko03400	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
GGJMDCOG_01615	7.18e-187	-	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase family
GGJMDCOG_01616	1.15e-154	ung2	3.2.2.27	-	L	ko:K21929	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Uracil-DNA glycosylase
GGJMDCOG_01617	4.96e-270	-	-	-	S	-	-	-	SLAP domain
GGJMDCOG_01618	1.64e-74	rplS	-	-	J	ko:K02884	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
GGJMDCOG_01619	8.68e-171	trmD	2.1.1.228	-	J	ko:K00554	-	ko00000,ko01000,ko03016	Belongs to the RNA methyltransferase TrmD family
GGJMDCOG_01620	2.08e-122	rimM	-	-	J	ko:K02860	-	ko00000,ko03009	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
GGJMDCOG_01621	6.78e-60	rpsP	-	-	J	ko:K02959	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Belongs to the bacterial ribosomal protein bS16 family
GGJMDCOG_01622	1.34e-289	ffh	3.6.5.4	-	U	ko:K03106	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko01000,ko02044	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
GGJMDCOG_01623	5.56e-72	ylxM	-	-	S	ko:K09787	-	ko00000	Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
GGJMDCOG_01624	0.0	ctrA	-	-	E	ko:K03294	-	ko00000	amino acid
GGJMDCOG_01625	0.0	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	FtsX-like permease family
GGJMDCOG_01626	5.41e-172	cysA	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
GGJMDCOG_01627	2.1e-31	-	-	-	-	-	-	-	-
GGJMDCOG_01628	1.69e-06	-	-	-	-	-	-	-	-
GGJMDCOG_01629	0.0	pepD2	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
GGJMDCOG_01630	4.69e-226	ftsY	-	-	U	ko:K03110	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
GGJMDCOG_01631	0.0	smc	-	-	D	ko:K03529	-	ko00000,ko03036	Required for chromosome condensation and partitioning
GGJMDCOG_01632	2.8e-160	rnc	3.1.26.3	-	J	ko:K03685	ko03008,ko05205,map03008,map05205	ko00000,ko00001,ko01000,ko03009,ko03019,ko03036	Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
GGJMDCOG_01633	0.0	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
GGJMDCOG_01634	3.06e-181	oppC5	-	-	P	ko:K02034	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
GGJMDCOG_01635	1.53e-218	oppB	-	-	P	ko:K02033,ko:K02034	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
GGJMDCOG_01636	3.27e-229	oppF	-	-	P	ko:K02032	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
GGJMDCOG_01637	7.02e-245	oppD	-	-	P	ko:K02031,ko:K15583	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
GGJMDCOG_01638	1.04e-45	acpP	-	-	IQ	ko:K02078	-	ko00000,ko00001	Carrier of the growing fatty acid chain in fatty acid biosynthesis
GGJMDCOG_01639	3.69e-233	plsX	2.3.1.15	-	I	ko:K03621	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
GGJMDCOG_01640	0.0	recG	3.6.4.12	-	L	ko:K03655	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
GGJMDCOG_01641	0.0	yloV	-	-	S	ko:K07030	-	ko00000	DAK2 domain fusion protein YloV
GGJMDCOG_01642	8.29e-75	yloU	-	-	S	-	-	-	Asp23 family, cell envelope-related function
GGJMDCOG_01643	1.33e-35	rpmB	-	-	J	ko:K02902	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL28 family
GGJMDCOG_01644	2.2e-41	-	-	-	-	-	-	-	-
GGJMDCOG_01645	3.84e-160	thiN	2.7.6.2	-	H	ko:K00949	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000	thiamine pyrophosphokinase
GGJMDCOG_01646	4.33e-153	rpe	5.1.3.1	-	G	ko:K01783	ko00030,ko00040,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the ribulose-phosphate 3-epimerase family
GGJMDCOG_01647	1.71e-208	rsgA	3.1.3.100	-	S	ko:K06949	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000,ko03009	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
GGJMDCOG_01648	0.0	prkC	2.7.11.1	-	KLT	ko:K08884,ko:K12132	-	ko00000,ko01000,ko01001	serine threonine protein kinase
GGJMDCOG_01649	1.98e-180	stp	3.1.3.16	-	T	ko:K20074	-	ko00000,ko01000,ko01009	phosphatase
GGJMDCOG_01650	1.06e-308	sun	2.1.1.176	-	J	ko:K03500	-	ko00000,ko01000,ko03009	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
GGJMDCOG_01651	4.41e-220	fmt	2.1.2.9	-	J	ko:K00604	ko00670,ko00970,map00670,map00970	ko00000,ko00001,ko01000	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
GGJMDCOG_01652	0.0	priA	-	-	L	ko:K04066	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
GGJMDCOG_01653	2.37e-46	rpoZ	2.7.7.6	-	K	ko:K03060	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
GGJMDCOG_01654	5.97e-145	gmk	2.7.4.8	-	F	ko:K00942	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko00002,ko01000	Essential for recycling GMP and indirectly, cGMP
GGJMDCOG_01655	2.19e-100	-	-	-	S	-	-	-	ASCH
GGJMDCOG_01656	0.0	recN	-	-	L	ko:K03631	-	ko00000,ko03400	May be involved in recombinational repair of damaged DNA
GGJMDCOG_01657	7.22e-197	rrmJ	2.1.1.226, 2.1.1.227	-	J	ko:K06442	-	ko00000,ko01000,ko03009	Ribosomal RNA large subunit methyltransferase J
GGJMDCOG_01658	6.44e-205	ispA	2.5.1.1, 2.5.1.10, 2.5.1.29	-	H	ko:K13789	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko01006	Belongs to the FPP GGPP synthase family
GGJMDCOG_01659	1.53e-47	xseB	3.1.11.6	-	L	ko:K03602	ko03430,map03430	ko00000,ko00001,ko01000,ko03400	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
GGJMDCOG_01660	5.64e-248	xseA	3.1.11.6	-	L	ko:K03601	ko03430,map03430	ko00000,ko00001,ko01000,ko03400	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
GGJMDCOG_01661	7.19e-199	folD	1.5.1.5, 3.5.4.9	-	F	ko:K01491	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
GGJMDCOG_01662	2.78e-85	nusB	-	-	K	ko:K03625	-	ko00000,ko03009,ko03021	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
GGJMDCOG_01663	7.98e-93	WQ51_04310	-	-	S	ko:K10947	-	ko00000,ko03000	Asp23 family, cell envelope-related function
GGJMDCOG_01664	2.11e-133	efp	-	-	J	ko:K02356	-	ko00000,ko03012	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
GGJMDCOG_01665	2.14e-257	pepP	3.4.11.9, 3.4.13.9	-	E	ko:K01262,ko:K01271	-	ko00000,ko01000,ko01002	Creatinase/Prolidase N-terminal domain
GGJMDCOG_01666	7.95e-64	rpmA	-	-	J	ko:K02899	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL27 family
GGJMDCOG_01667	6.82e-66	rplU	-	-	J	ko:K02888	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein binds to 23S rRNA in the presence of protein L20
GGJMDCOG_01668	6.12e-193	-	-	-	S	-	-	-	Uncharacterised 5xTM membrane BCR, YitT family COG1284
GGJMDCOG_01669	0.0	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2325)
GGJMDCOG_01671	2.07e-38	dmpI	5.3.2.6	-	G	ko:K01821	ko00362,ko00621,ko00622,ko01100,ko01120,ko01220,map00362,map00621,map00622,map01100,map01120,map01220	ko00000,ko00001,ko00002,ko01000	Belongs to the 4-oxalocrotonate tautomerase family
GGJMDCOG_01672	0.0	-	-	-	S	-	-	-	Predicted membrane protein (DUF2207)
GGJMDCOG_01673	8.57e-202	cinI	-	-	S	ko:K06889	-	ko00000	Serine hydrolase (FSH1)
GGJMDCOG_01674	2.73e-268	-	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
GGJMDCOG_01676	1.23e-227	lipA	-	-	I	-	-	-	Carboxylesterase family
GGJMDCOG_01677	1.82e-86	yusI	1.20.4.1	-	P	ko:K00537	-	ko00000,ko01000	Belongs to the ArsC family
GGJMDCOG_01678	0.0	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
GGJMDCOG_01679	0.0	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
GGJMDCOG_01680	9.38e-189	supH	-	-	S	-	-	-	haloacid dehalogenase-like hydrolase
GGJMDCOG_01681	4.3e-66	-	-	-	-	-	-	-	-
GGJMDCOG_01682	8.51e-50	-	-	-	-	-	-	-	-
GGJMDCOG_01683	2.48e-80	-	-	-	S	-	-	-	Alpha beta hydrolase
GGJMDCOG_01684	1.02e-29	-	-	-	S	-	-	-	Alpha beta hydrolase
GGJMDCOG_01685	0.0	pepX	3.4.14.11	-	E	ko:K01281	-	ko00000,ko01000,ko01002	Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
GGJMDCOG_01686	2.88e-105	msrB	1.8.4.12	-	O	ko:K07305	-	ko00000,ko01000	peptide methionine sulfoxide reductase
GGJMDCOG_01687	8.74e-62	-	-	-	-	-	-	-	-
GGJMDCOG_01688	6.79e-190	-	-	-	U	ko:K05340	-	ko00000,ko02000	sugar transport
GGJMDCOG_01689	6.69e-115	lctP	-	-	C	ko:K03303	-	ko00000,ko02000	L-lactate permease
GGJMDCOG_01690	0.0	carB	6.3.5.5	-	F	ko:K01955	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthase
GGJMDCOG_01691	4.22e-269	carA	6.3.5.5	-	F	ko:K01956	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthetase glutamine chain
GGJMDCOG_01692	2.04e-313	pyrC	3.5.2.3	-	F	ko:K01465	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
GGJMDCOG_01693	9.05e-231	pyrB	2.1.3.2	-	F	ko:K00609	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the ATCase OTCase family
GGJMDCOG_01694	1.01e-122	pyrR	2.4.2.9	-	F	ko:K02825	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000,ko03000	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
GGJMDCOG_01695	6.2e-212	pyrD	1.3.1.14, 1.3.98.1	-	F	ko:K00226,ko:K17828	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
GGJMDCOG_01696	1.56e-164	pyrF	4.1.1.23	-	F	ko:K01591	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
GGJMDCOG_01697	5.5e-154	pyrE	2.4.2.10	-	F	ko:K00762	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
GGJMDCOG_01698	4.37e-132	-	-	-	GM	-	-	-	NmrA-like family
GGJMDCOG_01699	3.87e-20	-	-	-	K	-	-	-	FCD
GGJMDCOG_01700	1.45e-34	-	-	-	K	-	-	-	FCD
GGJMDCOG_01701	2.94e-74	eriC	-	-	P	ko:K03281	-	ko00000	chloride
GGJMDCOG_01702	1.59e-66	eriC	-	-	P	ko:K03281	-	ko00000	chloride
GGJMDCOG_01703	2.28e-76	eriC	-	-	P	ko:K03281	-	ko00000	chloride
GGJMDCOG_01704	5.2e-137	-	-	-	L	-	-	-	PFAM Integrase catalytic
GGJMDCOG_01706	4.14e-113	-	-	-	K	ko:K03484	-	ko00000,ko03000	Periplasmic binding protein domain
GGJMDCOG_01707	0.0	pulA	3.2.1.41	CBM48,GH13	G	ko:K01200	ko00500,ko01100,ko01110,map00500,map01100,map01110	ko00000,ko00001,ko01000	belongs to the glycosyl hydrolase 13 family
GGJMDCOG_01708	3.86e-109	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
GGJMDCOG_01709	6.38e-154	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
GGJMDCOG_01710	0.0	yjcA	-	-	S	ko:K19350	ko02010,map02010	ko00000,ko00001,ko01504,ko02000	ABC transporter
GGJMDCOG_01711	1.03e-47	-	-	-	-	-	-	-	-
GGJMDCOG_01712	1.63e-159	-	4.3.1.17	-	E	ko:K01752	ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230	ko00000,ko00001,ko01000	Serine dehydratase beta chain
GGJMDCOG_01713	1.56e-198	sdaAA	4.3.1.17	-	E	ko:K01752	ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230	ko00000,ko00001,ko01000	L-serine dehydratase, iron-sulfur-dependent, alpha subunit
GGJMDCOG_01714	1.6e-69	yitW	-	-	S	-	-	-	Iron-sulfur cluster assembly protein
GGJMDCOG_01715	4.75e-239	-	-	-	M	-	-	-	Glycosyl transferase
GGJMDCOG_01716	3.67e-225	-	-	-	G	-	-	-	Glycosyl hydrolases family 8
GGJMDCOG_01717	1.11e-154	yfbR	-	-	S	ko:K07023	-	ko00000	HD containing hydrolase-like enzyme
GGJMDCOG_01718	2.42e-204	-	-	-	L	-	-	-	HNH nucleases
GGJMDCOG_01719	1.4e-191	yhaH	-	-	S	-	-	-	Protein of unknown function (DUF805)
GGJMDCOG_01720	2.89e-173	glnQ	-	-	E	ko:K17076	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
GGJMDCOG_01721	0.0	XK27_05795	-	-	P	ko:K17073,ko:K17074	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
GGJMDCOG_01722	4.04e-155	yxlJ	3.2.2.21	-	L	ko:K03652	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Belongs to the DNA glycosylase MPG family
GGJMDCOG_01723	7.63e-85	yeaO	-	-	S	-	-	-	Protein of unknown function, DUF488
GGJMDCOG_01724	1.14e-164	terC	-	-	P	-	-	-	Integral membrane protein TerC family
GGJMDCOG_01725	1.25e-119	adaB	2.1.1.63	-	L	ko:K00567,ko:K10778,ko:K13531	-	ko00000,ko01000,ko03000,ko03400	6-O-methylguanine DNA methyltransferase, DNA binding domain
GGJMDCOG_01726	1.24e-169	cobB	-	-	K	ko:K12410	-	ko00000,ko01000	SIR2 family
GGJMDCOG_01727	5.17e-169	dapE	3.5.1.18	-	E	ko:K01439	ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000	succinyl-diaminopimelate desuccinylase
GGJMDCOG_01728	4.78e-308	lctO	1.13.12.4	-	C	ko:K00467,ko:K10530	ko00620,map00620	ko00000,ko00001,ko01000	L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases
GGJMDCOG_01729	4.71e-283	ackA	2.7.2.1	-	F	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
GGJMDCOG_01730	0.0	potE	-	-	E	-	-	-	Amino Acid
GGJMDCOG_01731	9.84e-63	-	-	-	S	-	-	-	Fic/DOC family
GGJMDCOG_01733	0.0	-	-	-	-	-	-	-	-
GGJMDCOG_01734	2.05e-110	-	-	-	-	-	-	-	-
GGJMDCOG_01735	1.92e-113	yhaH	-	-	S	-	-	-	Protein of unknown function (DUF805)
GGJMDCOG_01736	2.65e-89	-	-	-	O	-	-	-	OsmC-like protein
GGJMDCOG_01737	5.3e-264	-	-	-	EGP	-	-	-	Major Facilitator Superfamily
GGJMDCOG_01738	3e-290	sptS	-	-	T	-	-	-	Histidine kinase
GGJMDCOG_01739	2.14e-85	dltr	-	-	K	-	-	-	response regulator
GGJMDCOG_01740	4.52e-35	dltr	-	-	K	-	-	-	response regulator
GGJMDCOG_01741	3.99e-127	-	-	-	T	-	-	-	Region found in RelA / SpoT proteins
GGJMDCOG_01742	5.69e-179	msmE	-	-	G	ko:K10117	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding protein
GGJMDCOG_01743	1.14e-208	-	-	-	K	ko:K03484	-	ko00000,ko03000	Periplasmic binding protein domain
GGJMDCOG_01744	2.14e-48	-	-	-	-	-	-	-	-
GGJMDCOG_01745	3.94e-252	galM	5.1.3.3	-	G	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the interconversion of alpha and beta anomers of maltose
GGJMDCOG_01746	0.0	galT	2.7.7.12	-	G	ko:K00965	ko00052,ko00520,ko01100,ko04917,map00052,map00520,map01100,map04917	ko00000,ko00001,ko00002,ko01000	UDP-glucose--hexose-1-phosphate uridylyltransferase
GGJMDCOG_01747	4.16e-280	galK	2.7.1.6	-	F	ko:K00849	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
GGJMDCOG_01748	0.0	lacZ	3.2.1.23	-	G	ko:K12308	ko00052,map00052	ko00000,ko00001,ko01000	-beta-galactosidase
GGJMDCOG_01749	0.0	lacS	-	-	G	ko:K11104,ko:K16209	-	ko00000,ko02000	Transporter
GGJMDCOG_01750	1.48e-210	lacR	-	-	K	ko:K02529	-	ko00000,ko03000	Transcriptional regulator
GGJMDCOG_01751	0.0	lacL	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 2 family
GGJMDCOG_01752	2.51e-184	lacM	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	beta-galactosidase
GGJMDCOG_01753	2.84e-240	galE	5.1.3.2	-	M	ko:K01784	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the NAD(P)-dependent epimerase dehydratase family
GGJMDCOG_01754	4.05e-209	-	-	-	S	-	-	-	Nucleotidyl transferase AbiEii toxin, Type IV TA system
GGJMDCOG_01755	5.55e-137	-	-	-	K	-	-	-	Transcriptional regulator, AbiEi antitoxin
GGJMDCOG_01756	4.05e-242	-	-	-	K	ko:K02529	-	ko00000,ko03000	Periplasmic binding protein-like domain
GGJMDCOG_01757	1.1e-110	-	-	-	K	ko:K02529	-	ko00000,ko03000	helix_turn _helix lactose operon repressor
GGJMDCOG_01758	0.0	-	-	-	G	-	-	-	Belongs to the glycosyl hydrolase 31 family
GGJMDCOG_01759	0.0	polYB	2.7.7.7	-	L	ko:K02346,ko:K03502	-	ko00000,ko01000,ko03400	Belongs to the DNA polymerase type-Y family
GGJMDCOG_01760	2.76e-83	-	-	-	-	-	-	-	-
GGJMDCOG_01761	0.0	speA	4.1.1.17, 4.1.1.18, 4.1.1.19	-	E	ko:K01581,ko:K01582,ko:K01585	ko00310,ko00330,ko00480,ko00960,ko01100,ko01110,ko01130,map00310,map00330,map00480,map00960,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Orn/Lys/Arg decarboxylase, C-terminal domain
GGJMDCOG_01762	1.06e-256	-	-	-	L	-	-	-	COG2826 Transposase and inactivated derivatives, IS30 family
GGJMDCOG_01763	0.0	-	-	-	E	-	-	-	Amino acid permease
GGJMDCOG_01764	1.5e-64	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
GGJMDCOG_01765	4.23e-46	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
GGJMDCOG_01767	0.0	oppA	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
GGJMDCOG_01768	1.28e-09	-	-	-	S	-	-	-	PFAM HicB family
GGJMDCOG_01769	1.22e-202	-	-	-	S	-	-	-	interspecies interaction between organisms
GGJMDCOG_01770	3e-271	tnpB	-	-	L	ko:K07496	-	ko00000	Putative transposase DNA-binding domain
GGJMDCOG_01771	6.79e-45	-	-	-	-	-	-	-	-
GGJMDCOG_01773	1.92e-42	-	-	-	S	-	-	-	protein encoded in hypervariable junctions of pilus gene clusters
GGJMDCOG_01774	3.96e-19	-	-	-	S	-	-	-	HicA toxin of bacterial toxin-antitoxin,
GGJMDCOG_01776	1.21e-204	-	-	-	-	-	-	-	-
GGJMDCOG_01777	9.64e-219	-	-	-	-	-	-	-	-
GGJMDCOG_01778	0.0	glnA	6.3.1.2	-	E	ko:K01915	ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727	ko00000,ko00001,ko01000,ko04147	glutamine synthetase
GGJMDCOG_01779	2.05e-286	ynbB	-	-	P	-	-	-	aluminum resistance
GGJMDCOG_01780	1.82e-214	miaA	2.5.1.75	-	F	ko:K00791	ko00908,ko01100,ko01110,map00908,map01100,map01110	ko00000,ko00001,ko01000,ko01006,ko03016	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
GGJMDCOG_01781	4.95e-89	yqhL	-	-	P	-	-	-	Rhodanese-like protein
GGJMDCOG_01782	1e-47	yqgQ	-	-	S	-	-	-	Bacterial protein of unknown function (DUF910)
GGJMDCOG_01783	9.32e-154	gluP	3.4.21.105	-	S	ko:K19225	-	ko00000,ko01000,ko01002	Rhomboid family
GGJMDCOG_01784	7.92e-126	fthC	6.3.3.2	-	H	ko:K01934	ko00670,ko01100,map00670,map01100	ko00000,ko00001,ko01000	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
GGJMDCOG_01785	6.25e-29	rpmG	-	-	J	ko:K02913	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL33 family
GGJMDCOG_01786	0.0	pbp2b	-	-	M	ko:K00687,ko:K12553,ko:K21465,ko:K21466	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01011	Penicillin-binding Protein
GGJMDCOG_01787	0.0	-	-	-	S	-	-	-	membrane
GGJMDCOG_01788	7.04e-218	-	-	-	G	-	-	-	BadF/BadG/BcrA/BcrD ATPase family
GGJMDCOG_01789	9.43e-52	-	-	-	S	ko:K07473	-	ko00000,ko02048	RelB antitoxin
GGJMDCOG_01790	2.74e-69	-	-	-	S	ko:K19157	-	ko00000,ko01000,ko02048	Bacterial toxin of type II toxin-antitoxin system, YafQ
GGJMDCOG_01791	2.22e-60	hupB2	-	-	L	ko:K03530	-	ko00000,ko03032,ko03036,ko03400	Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
GGJMDCOG_01792	1.49e-178	-	3.6.3.34	-	HP	ko:K02013	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	abc transporter atp-binding protein
GGJMDCOG_01793	1.55e-201	isdF	-	-	U	ko:K02015	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
GGJMDCOG_01794	2.07e-203	isdE	-	-	P	ko:K02016	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Periplasmic binding protein
GGJMDCOG_01795	7.04e-159	-	-	-	M	ko:K14193	ko05150,map05150	ko00000,ko00001	Iron Transport-associated domain
GGJMDCOG_01797	1.75e-120	-	-	-	-	-	-	-	-
GGJMDCOG_01798	3.7e-164	-	-	-	S	-	-	-	SLAP domain
GGJMDCOG_01799	7.65e-65	-	2.7.7.49	-	L	ko:K00986	-	ko00000,ko01000	PFAM RNA-directed DNA polymerase (Reverse transcriptase)
GGJMDCOG_01800	2.87e-107	-	-	-	S	-	-	-	An automated process has identified a potential problem with this gene model
GGJMDCOG_01801	3.2e-176	-	-	-	S	-	-	-	Protein of unknown function (DUF3100)
GGJMDCOG_01802	2.48e-313	-	-	-	S	ko:K12941	-	ko00000,ko01002	Peptidase dimerisation domain
GGJMDCOG_01803	6.53e-291	-	-	-	Q	-	-	-	Imidazolonepropionase and related amidohydrolases
GGJMDCOG_01804	0.0	oppA	-	-	E	ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter
GGJMDCOG_01805	1.76e-193	-	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
GGJMDCOG_01806	0.0	sufI	-	-	Q	-	-	-	Multicopper oxidase
GGJMDCOG_01807	1.8e-34	-	-	-	-	-	-	-	-
GGJMDCOG_01808	2.24e-202	metQ	-	-	P	ko:K02073	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the nlpA lipoprotein family
GGJMDCOG_01809	8.21e-215	ldh3	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	lactate/malate dehydrogenase, alpha/beta C-terminal domain
GGJMDCOG_01810	7.84e-89	greA	-	-	K	ko:K03624	-	ko00000,ko03021	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
GGJMDCOG_01811	0.0	pheT	6.1.1.20	-	J	ko:K01890	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
GGJMDCOG_01812	2.9e-254	pheS	6.1.1.20	-	J	ko:K01889	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
GGJMDCOG_01813	3.72e-202	cjaA	-	-	ET	ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter substrate-binding protein
GGJMDCOG_01814	4.57e-163	glnQ	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
GGJMDCOG_01815	1.68e-149	glnP7	-	-	P	ko:K02029	-	ko00000,ko00002,ko02000	ABC transporter permease
GGJMDCOG_01816	1.48e-138	glnP9	-	-	P	ko:K02029	-	ko00000,ko00002,ko02000	ABC transporter, permease protein
GGJMDCOG_01818	3.71e-76	yodB	-	-	K	-	-	-	Transcriptional regulator, HxlR family
GGJMDCOG_01819	1.37e-173	spoU	-	-	J	ko:K03437	-	ko00000,ko03016	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
GGJMDCOG_01820	1.32e-57	acyP	3.6.1.7	-	C	ko:K01512	ko00620,ko00627,ko01120,map00620,map00627,map01120	ko00000,ko00001,ko01000	Belongs to the acylphosphatase family
GGJMDCOG_01821	2.43e-216	yidC	-	-	U	ko:K03217	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044,ko03029	Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
GGJMDCOG_01822	3.23e-108	-	-	-	S	ko:K19055	-	ko00000,ko01000,ko03016	Aminoacyl-tRNA editing domain
GGJMDCOG_01823	2.95e-283	-	-	-	S	-	-	-	SLAP domain
GGJMDCOG_01824	4.28e-125	-	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
GGJMDCOG_01825	2.19e-18	-	-	-	-	-	-	-	-
GGJMDCOG_01826	0.0	arlS	2.7.13.3	-	T	ko:K18940	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
GGJMDCOG_01827	3.52e-163	csrR	-	-	K	-	-	-	response regulator
GGJMDCOG_01828	2.19e-125	ylbN	-	-	S	ko:K07040	-	ko00000	Uncharacterized ACR, COG1399
GGJMDCOG_01829	8.01e-276	ylbM	-	-	S	-	-	-	Belongs to the UPF0348 family
GGJMDCOG_01830	5.95e-77	rsfS	-	-	J	ko:K09710	-	ko00000,ko03009	Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
GGJMDCOG_01831	9.22e-141	yqeK	-	-	H	-	-	-	Hydrolase, HD family
GGJMDCOG_01832	1.77e-157	nadD	2.7.7.18	-	H	ko:K00969	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
GGJMDCOG_01833	5.03e-256	yqeH	-	-	S	ko:K06948	-	ko00000,ko03009	Ribosome biogenesis GTPase YqeH
GGJMDCOG_01834	6.85e-109	yqeG	-	-	S	ko:K07015	-	ko00000	HAD phosphatase, family IIIA
GGJMDCOG_01835	3.01e-255	tnpB	-	-	L	ko:K07496	-	ko00000	Putative transposase DNA-binding domain
GGJMDCOG_01836	1.25e-192	add	3.5.4.2, 3.5.4.4	-	F	ko:K01488,ko:K02029,ko:K21053	ko00230,ko01100,ko05340,map00230,map01100,map05340	ko00000,ko00001,ko00002,ko01000,ko02000	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
GGJMDCOG_01837	8.69e-76	rplT	-	-	J	ko:K02887	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
GGJMDCOG_01838	9.64e-38	rpmI	-	-	J	ko:K02916	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL35 family
GGJMDCOG_01839	1.07e-93	infC	-	-	J	ko:K02520	-	ko00000,ko03012,ko03029	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
GGJMDCOG_01840	6.18e-123	rihC	3.2.2.1	-	F	ko:K01239,ko:K01250,ko:K12700	ko00230,ko00760,ko01100,map00230,map00760,map01100	ko00000,ko00001,ko01000	Nucleoside
GGJMDCOG_01841	1.1e-128	-	-	-	E	ko:K02054	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
GGJMDCOG_01842	5.59e-98	-	-	-	-	-	-	-	-
GGJMDCOG_01843	0.0	thrS	6.1.1.3	-	J	ko:K01868	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
GGJMDCOG_01844	1.31e-215	dnaI	-	-	L	ko:K11144	-	ko00000,ko03032	Primosomal protein DnaI
GGJMDCOG_01845	0.0	dnaB2	-	-	L	ko:K03346	-	ko00000,ko03032	Replication initiation and membrane attachment
GGJMDCOG_01846	1.29e-106	nrdR	-	-	K	ko:K07738	-	ko00000,ko03000	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
GGJMDCOG_01847	2.16e-136	coaE	2.7.1.24	-	F	ko:K00859	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
GGJMDCOG_01848	7.81e-199	fpg	3.2.2.23, 4.2.99.18	-	L	ko:K10563	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
GGJMDCOG_01849	0.0	polA	2.7.7.7	-	L	ko:K02335	ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440	ko00000,ko00001,ko01000,ko03032,ko03400	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
GGJMDCOG_01850	1.98e-35	hflC	-	-	O	ko:K04087	-	ko00000,ko00002,ko01000	prohibitin homologues
GGJMDCOG_01851	2.53e-139	hflC	-	-	O	ko:K04087	-	ko00000,ko00002,ko01000	prohibitin homologues
GGJMDCOG_01852	1.33e-67	-	-	-	L	ko:K07473	-	ko00000,ko02048	RelB antitoxin
GGJMDCOG_01853	2.43e-239	-	-	-	S	-	-	-	Bacteriocin helveticin-J
GGJMDCOG_01854	0.0	-	-	-	M	-	-	-	Peptidase family M1 domain
GGJMDCOG_01855	2.04e-226	-	-	-	S	-	-	-	SLAP domain
GGJMDCOG_01856	4.65e-278	mepA	-	-	V	ko:K18908	-	ko00000,ko00002,ko01504,ko02000	MATE efflux family protein
GGJMDCOG_01857	2.59e-313	murC	6.3.2.8	-	M	ko:K01924	ko00471,ko00550,ko01100,map00471,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Belongs to the MurCDEF family
GGJMDCOG_01858	8.78e-157	XK27_10290	-	-	J	ko:K06878	-	ko00000	Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
GGJMDCOG_01859	1.35e-71	ytpP	-	-	CO	-	-	-	Thioredoxin
GGJMDCOG_01861	2.16e-163	trmB	2.1.1.33	-	J	ko:K03439	-	ko00000,ko01000,ko03016	Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
GGJMDCOG_01862	1.63e-281	ecsB	-	-	U	ko:K01992	-	ko00000,ko00002,ko02000	ABC transporter
GGJMDCOG_01863	3.67e-174	ecsA	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
GGJMDCOG_01864	1.61e-101	hit	-	-	FG	ko:K02503	-	ko00000,ko04147	Scavenger mRNA decapping enzyme C-term binding
GGJMDCOG_01865	1.2e-41	-	-	-	-	-	-	-	-
GGJMDCOG_01866	3.12e-196	prsA	5.2.1.8	-	M	ko:K07533	-	ko00000,ko01000,ko03110	Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
GGJMDCOG_01867	5.74e-96	eda	4.1.2.14, 4.1.3.42	-	G	ko:K01625	ko00030,ko00630,ko01100,ko01120,ko01200,map00030,map00630,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	KDPG and KHG aldolase
GGJMDCOG_01868	0.0	-	-	-	-	-	-	-	-
GGJMDCOG_01869	9.67e-33	-	-	-	S	-	-	-	Domain of unknown function DUF1829
GGJMDCOG_01871	4.53e-239	yhaM	-	-	S	ko:K03698	-	ko00000,ko01000,ko03019	Metal dependent phosphohydrolases with conserved 'HD' motif.
GGJMDCOG_01872	0.0	yhaN	-	-	L	-	-	-	AAA domain
GGJMDCOG_01873	1.27e-290	yhaO	-	-	L	ko:K03547	-	ko00000,ko03400	Ser Thr phosphatase family protein
GGJMDCOG_01874	8.43e-73	yheA	-	-	S	-	-	-	Belongs to the UPF0342 family
GGJMDCOG_01875	0.0	pbp2A	2.4.1.129, 3.4.16.4	GT51	M	ko:K12555	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01003,ko01011	penicillin-binding protein
GGJMDCOG_01876	1.21e-207	rluA	5.4.99.23, 5.4.99.28, 5.4.99.29	-	J	ko:K06177,ko:K06180	-	ko00000,ko01000,ko03009,ko03016	Responsible for synthesis of pseudouridine from uracil
GGJMDCOG_01877	0.0	pps	2.7.9.2	-	H	ko:K01007	ko00620,ko00680,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate
GGJMDCOG_01878	7.62e-134	-	-	-	G	-	-	-	Phosphoglycerate mutase family
GGJMDCOG_01879	5.46e-182	glpF	-	-	U	ko:K02440	-	ko00000,ko02000	Belongs to the MIP aquaporin (TC 1.A.8) family
GGJMDCOG_01880	2.74e-06	-	-	-	S	-	-	-	PFAM Archaeal ATPase
GGJMDCOG_01881	4.95e-164	citG	2.4.2.52	-	H	ko:K05966	ko02020,map02020	ko00000,ko00001,ko01000	2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase
GGJMDCOG_01882	4.77e-248	-	-	-	I	-	-	-	transferase activity, transferring acyl groups other than amino-acyl groups
GGJMDCOG_01883	1.28e-226	-	-	-	S	-	-	-	PFAM Archaeal ATPase
GGJMDCOG_01884	1.86e-91	-	-	-	S	ko:K07133	-	ko00000	cog cog1373
GGJMDCOG_01885	2.29e-112	-	-	-	-	-	-	-	-
GGJMDCOG_01886	0.0	cls	-	-	I	ko:K06131	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
GGJMDCOG_01887	1.24e-232	-	-	-	S	-	-	-	Alpha/beta hydrolase of unknown function (DUF915)
GGJMDCOG_01888	5.07e-190	rnhA	3.1.26.4	-	L	ko:K03469	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
GGJMDCOG_01889	9.18e-187	-	-	-	S	-	-	-	Protein of unknown function (DUF1002)
GGJMDCOG_01890	2.62e-199	epsV	-	-	S	-	-	-	glycosyl transferase family 2
GGJMDCOG_01891	5.29e-164	-	-	-	S	-	-	-	Alpha/beta hydrolase family
GGJMDCOG_01892	1.63e-180	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
GGJMDCOG_01893	2.32e-47	-	-	-	-	-	-	-	-
GGJMDCOG_01894	1.76e-233	prs2	2.7.6.1	-	F	ko:K00948	ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
GGJMDCOG_01895	8.37e-161	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
GGJMDCOG_01896	1.11e-177	-	-	-	-	-	-	-	-
GGJMDCOG_01897	0.0	glnPH2	-	-	P	ko:K02029,ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter permease
GGJMDCOG_01898	5.85e-170	glnQ	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
GGJMDCOG_01899	7.36e-291	-	-	-	S	-	-	-	Cysteine-rich secretory protein family
GGJMDCOG_01900	2.43e-263	ddl	6.3.2.4	-	F	ko:K01921	ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Belongs to the D-alanine--D-alanine ligase family
GGJMDCOG_01901	8.18e-163	-	-	-	-	-	-	-	-
GGJMDCOG_01902	1.69e-258	yibE	-	-	S	-	-	-	overlaps another CDS with the same product name
GGJMDCOG_01903	7.8e-167	yibF	-	-	S	-	-	-	overlaps another CDS with the same product name
GGJMDCOG_01904	1.63e-200	-	-	-	I	-	-	-	alpha/beta hydrolase fold
GGJMDCOG_01905	0.0	-	-	-	G	-	-	-	Belongs to the glycosyl hydrolase 31 family
GGJMDCOG_01906	8.82e-277	nagA	3.5.1.25	-	G	ko:K01443	ko00520,ko01130,map00520,map01130	ko00000,ko00001,ko01000	Belongs to the metallo-dependent hydrolases superfamily. NagA family
GGJMDCOG_01907	1.62e-105	yveB	-	-	I	-	-	-	PAP2 superfamily
GGJMDCOG_01908	1.08e-161	-	-	-	S	ko:K07133	-	ko00000	cog cog1373
GGJMDCOG_01909	1.48e-139	-	-	-	EGP	-	-	-	Major Facilitator
GGJMDCOG_01910	9.16e-301	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
GGJMDCOG_01911	7.84e-95	-	-	-	EGP	-	-	-	Major Facilitator
GGJMDCOG_01912	2.58e-45	-	-	-	-	-	-	-	-
GGJMDCOG_01914	3.3e-42	-	-	-	-	-	-	-	-
GGJMDCOG_01915	1.62e-96	-	-	-	M	-	-	-	LysM domain
GGJMDCOG_01916	2.32e-86	-	2.5.1.74	-	H	ko:K02548	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01006	UbiA prenyltransferase family
GGJMDCOG_01917	7.02e-36	-	-	-	-	-	-	-	-
GGJMDCOG_01918	1.32e-105	-	-	-	S	-	-	-	PFAM Archaeal ATPase
GGJMDCOG_01919	8.08e-108	-	-	-	S	-	-	-	PFAM Archaeal ATPase
GGJMDCOG_01920	6.03e-218	fba	4.1.2.13, 4.1.2.29	-	G	ko:K01624,ko:K03339	ko00010,ko00030,ko00051,ko00562,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00562,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Fructose-1,6-bisphosphate aldolase, class II
GGJMDCOG_01921	0.0	argS	6.1.1.19	-	J	ko:K01887	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Arginyl-tRNA synthetase
GGJMDCOG_01922	5.6e-129	-	-	-	M	-	-	-	ErfK YbiS YcfS YnhG
GGJMDCOG_01923	2.23e-197	nnrD	4.2.1.136, 5.1.99.6	-	H	ko:K17758,ko:K17759	-	ko00000,ko01000	Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
GGJMDCOG_01924	9.64e-307	dacA	3.4.16.4	-	M	ko:K07258	ko00550,ko01100,map00550,map01100	ko00000,ko00001,ko01000,ko01002,ko01011	Belongs to the peptidase S11 family
GGJMDCOG_01926	1.59e-61	pspC	-	-	KT	ko:K03973	-	ko00000,ko02048,ko03000	PspC domain
GGJMDCOG_01927	3.54e-300	-	-	-	L	ko:K07497	-	ko00000	COG2963 Transposase and inactivated derivatives
GGJMDCOG_01928	0.0	phoR	2.7.13.3	-	T	ko:K07636	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
GGJMDCOG_01929	2.69e-156	phoB	-	-	T	ko:K07658	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	Transcriptional regulatory protein, C terminal
GGJMDCOG_01930	6.07e-138	-	-	-	P	ko:K02039	-	ko00000	Plays a role in the regulation of phosphate uptake
GGJMDCOG_01931	4.66e-179	pstB	3.6.3.27	-	P	ko:K02036	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
GGJMDCOG_01932	8.63e-195	pstA	-	-	P	ko:K02038	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Phosphate transport system permease protein PstA
GGJMDCOG_01933	8.73e-205	pstC	-	-	P	ko:K02037	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	probably responsible for the translocation of the substrate across the membrane
GGJMDCOG_01934	9.14e-187	pstS	-	-	P	ko:K02040	ko02010,ko02020,ko05152,map02010,map02020,map05152	ko00000,ko00001,ko00002,ko02000	Phosphate
GGJMDCOG_01935	4.84e-42	-	-	-	-	-	-	-	-
GGJMDCOG_01936	3.11e-256	oppA	-	-	E	ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
GGJMDCOG_01937	0.0	ytgP	-	-	S	ko:K03328	-	ko00000	Polysaccharide biosynthesis protein
GGJMDCOG_01938	0.0	leuS	6.1.1.4	-	J	ko:K01869	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Belongs to the class-I aminoacyl-tRNA synthetase family
GGJMDCOG_01939	1.39e-156	yodM	3.6.1.27	-	I	ko:K19302	ko00550,map00550	ko00000,ko00001,ko01000,ko01011	Acid phosphatase homologues
GGJMDCOG_01940	6.75e-216	-	-	-	K	-	-	-	LysR substrate binding domain
GGJMDCOG_01941	9.32e-109	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
GGJMDCOG_01942	1.41e-51	-	1.3.5.4	-	C	ko:K00244	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	ko00000,ko00001,ko00002,ko01000	FAD binding domain
GGJMDCOG_01943	3.01e-294	yumB	1.6.99.3	-	C	ko:K03885	ko00190,map00190	ko00000,ko00001,ko01000	NADH dehydrogenase
GGJMDCOG_01944	1.03e-206	menA	2.5.1.74	-	H	ko:K02548	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01006	1,4-dihydroxy-2-naphthoate
GGJMDCOG_01945	1.38e-226	hepT	2.5.1.30	-	H	ko:K00805	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	Belongs to the FPP GGPP synthase family
GGJMDCOG_01946	8.7e-166	menG	2.1.1.163, 2.1.1.201	-	H	ko:K03183	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
GGJMDCOG_01947	0.0	cydD	-	-	CO	ko:K16012	ko02010,map02010	ko00000,ko00001,ko02000	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
GGJMDCOG_01948	0.0	cydC	-	-	CO	ko:K16013	ko02010,map02010	ko00000,ko00001,ko02000	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
GGJMDCOG_01949	9.83e-236	cydB	1.10.3.14	-	C	ko:K00426	ko00190,ko01100,ko02020,map00190,map01100,map02020	ko00000,ko00001,ko00002,ko01000	Cytochrome d ubiquinol oxidase subunit II
GGJMDCOG_01950	0.0	cydA	1.10.3.14	-	C	ko:K00425	ko00190,ko01100,ko02020,map00190,map01100,map02020	ko00000,ko00001,ko00002,ko01000	ubiquinol oxidase
GGJMDCOG_01951	3.75e-168	-	-	-	K	-	-	-	rpiR family
GGJMDCOG_01952	7.66e-248	-	-	-	S	ko:K09963	-	ko00000	Bacterial protein of unknown function (DUF871)
GGJMDCOG_01953	1.81e-270	-	2.7.1.211	-	G	ko:K02809,ko:K02810	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
GGJMDCOG_01954	1.32e-151	-	-	-	S	-	-	-	Putative esterase
GGJMDCOG_01955	3.39e-154	murQ	4.2.1.126	-	G	ko:K07106	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
GGJMDCOG_01956	1.92e-102	-	-	-	K	-	-	-	Helix-turn-helix domain, rpiR family
GGJMDCOG_01958	0.0	mdr	-	-	EGP	-	-	-	Major Facilitator
GGJMDCOG_01959	7.29e-287	metK	2.5.1.6	-	H	ko:K00789	ko00270,ko01100,ko01110,ko01230,map00270,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
GGJMDCOG_01962	5.31e-211	-	-	-	P	ko:K02077	-	ko00000,ko00002,ko02000	Belongs to the bacterial solute-binding protein 9 family
GGJMDCOG_01965	1.38e-165	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
GGJMDCOG_01966	9.06e-184	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
GGJMDCOG_01967	1.44e-53	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
GGJMDCOG_01968	4.98e-37	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
GGJMDCOG_01969	0.0	serS	6.1.1.11	-	J	ko:K01875	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
GGJMDCOG_01970	1.23e-129	yjcK	2.3.1.128	-	J	ko:K03790	-	ko00000,ko01000,ko03009	Acetyltransferase (GNAT) domain
GGJMDCOG_01971	3.2e-143	-	-	-	S	-	-	-	SNARE associated Golgi protein
GGJMDCOG_01972	1.77e-194	-	-	-	I	-	-	-	alpha/beta hydrolase fold
GGJMDCOG_01973	6.76e-80	plcR	-	-	K	ko:K20480	ko02024,map02024	ko00000,ko00001,ko03000	Helix-turn-helix
GGJMDCOG_01974	4.06e-109	plcR	-	-	K	ko:K20480	ko02024,map02024	ko00000,ko00001,ko03000	Helix-turn-helix
GGJMDCOG_01975	1.19e-19	-	-	-	S	ko:K07133	-	ko00000	cog cog1373
GGJMDCOG_01976	1.41e-37	-	-	-	S	ko:K07133	-	ko00000	cog cog1373
GGJMDCOG_01977	2.35e-117	-	-	-	F	-	-	-	Nucleoside 2-deoxyribosyltransferase
GGJMDCOG_01978	0.0	gabD	1.2.1.16, 1.2.1.20, 1.2.1.79	-	C	ko:K00135	ko00250,ko00310,ko00350,ko00650,ko00760,ko01100,ko01120,map00250,map00310,map00350,map00650,map00760,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Belongs to the aldehyde dehydrogenase family
GGJMDCOG_01979	3.24e-290	-	-	-	L	-	-	-	COG3547 Transposase and inactivated derivatives
GGJMDCOG_01980	1.2e-220	-	-	-	-	-	-	-	-
GGJMDCOG_01981	1.86e-31	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
GGJMDCOG_01983	0.0	ydgH	-	-	S	ko:K06994	-	ko00000	MMPL family
GGJMDCOG_01984	1.53e-127	yobS	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
GGJMDCOG_01985	1.89e-205	-	3.5.2.6	-	V	ko:K17836	ko00311,ko01130,ko01501,map00311,map01130,map01501	ko00000,ko00001,ko00002,ko01000,ko01504	Beta-lactamase enzyme family
GGJMDCOG_01986	1.4e-207	corA	-	-	P	ko:K03284	-	ko00000,ko02000	CorA-like Mg2+ transporter protein
GGJMDCOG_01987	2.12e-310	-	-	-	G	ko:K02027	-	ko00000,ko00002,ko02000	Bacterial extracellular solute-binding protein
GGJMDCOG_01988	0.0	-	-	-	S	-	-	-	Zn-dependent metallo-hydrolase RNA specificity domain
GGJMDCOG_01989	5.62e-187	-	-	-	P	ko:K02026	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
GGJMDCOG_01990	1.34e-201	-	-	-	P	ko:K02025	-	ko00000,ko00002,ko02000	ABC-type sugar transport systems, permease components
GGJMDCOG_01991	5.26e-259	malK	-	-	P	ko:K10112,ko:K17240	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ATPases associated with a variety of cellular activities
GGJMDCOG_01992	0.0	pepD1	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
GGJMDCOG_01993	7.24e-204	endA	-	-	F	ko:K15051	-	ko00000	DNA RNA non-specific endonuclease
GGJMDCOG_01994	1.29e-230	-	2.7.7.7	-	L	ko:K02342	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	EXOIII
GGJMDCOG_01995	5.11e-203	-	-	-	K	-	-	-	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
GGJMDCOG_01996	2.23e-150	yviA	-	-	S	-	-	-	Protein of unknown function (DUF421)
GGJMDCOG_01997	2.94e-74	-	-	-	S	-	-	-	Protein of unknown function (DUF3290)
GGJMDCOG_01998	7.8e-10	-	-	-	S	-	-	-	Protein of unknown function (DUF3290)
GGJMDCOG_01999	3.16e-179	pnuC	-	-	H	ko:K03811	-	ko00000,ko02000	nicotinamide mononucleotide transporter
GGJMDCOG_02000	0.0	-	-	-	S	ko:K06921	-	ko00000	Archaea bacterial proteins of unknown function
GGJMDCOG_02002	4.83e-117	ntd	2.4.2.6	-	F	ko:K08728	ko00240,map00240	ko00000,ko00001,ko01000	Nucleoside
GGJMDCOG_02003	3.77e-113	-	2.7.1.200, 2.7.1.204	-	G	ko:K02773,ko:K20112	ko00052,ko01100,ko02060,map00052,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
GGJMDCOG_02004	1.24e-191	-	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Tyrosine phosphatase family
GGJMDCOG_02005	9.29e-111	usp5	-	-	T	-	-	-	universal stress protein
GGJMDCOG_02006	2.58e-203	phnD	-	-	P	ko:K02044	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Phosphonate ABC transporter
GGJMDCOG_02007	6.8e-175	phnC	3.6.3.28	-	P	ko:K02041	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
GGJMDCOG_02008	1.02e-154	phnB	-	-	P	ko:K02042	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
GGJMDCOG_02009	1.83e-190	-	-	-	P	ko:K02042	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
GGJMDCOG_02010	6.82e-139	tag	3.2.2.20	-	L	ko:K01246	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	glycosylase
GGJMDCOG_02011	5.18e-109	-	-	-	-	-	-	-	-
GGJMDCOG_02012	0.0	-	-	-	S	-	-	-	Calcineurin-like phosphoesterase
GGJMDCOG_02013	0.0	asnB	6.3.5.4	-	E	ko:K01953	ko00250,ko01100,ko01110,map00250,map01100,map01110	ko00000,ko00001,ko01000,ko01002	Asparagine synthase
GGJMDCOG_02014	0.0	yxbA	6.3.1.12	-	S	ko:K17810	-	ko00000,ko01000	ATP-grasp enzyme
GGJMDCOG_02015	0.0	nrdD	1.1.98.6	-	F	ko:K21636	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Ribonucleoside-triphosphate reductase
GGJMDCOG_02016	1.35e-180	nrdG	1.97.1.4	-	O	ko:K04068	-	ko00000,ko01000	Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
GGJMDCOG_02017	3.41e-132	yitW	-	-	S	-	-	-	Iron-sulfur cluster assembly protein
GGJMDCOG_02018	2.19e-292	XK27_04775	-	-	S	ko:K09155	-	ko00000	PAS domain
GGJMDCOG_02019	2.31e-277	yqjV	-	-	EGP	-	-	-	Major Facilitator Superfamily
GGJMDCOG_02020	0.0	pepO	-	-	O	ko:K07386	-	ko00000,ko01000,ko01002	Peptidase family M13
GGJMDCOG_02021	0.0	kup	-	-	P	ko:K03549	-	ko00000,ko02000	Transport of potassium into the cell
GGJMDCOG_02022	6.55e-97	-	-	-	-	-	-	-	-
GGJMDCOG_02023	3.75e-48	-	-	-	S	-	-	-	PFAM Archaeal ATPase
GGJMDCOG_02025	4.53e-76	-	-	-	T	ko:K07171	-	ko00000,ko01000,ko02048	PemK-like, MazF-like toxin of type II toxin-antitoxin system
GGJMDCOG_02026	3.61e-60	-	-	-	-	-	-	-	-
GGJMDCOG_02027	2.77e-25	-	-	-	-	-	-	-	-
GGJMDCOG_02028	1.21e-40	-	-	-	-	-	-	-	-
GGJMDCOG_02029	1.05e-54	-	-	-	S	-	-	-	Protein of unknown function (DUF2922)
GGJMDCOG_02030	2.95e-140	-	-	-	S	-	-	-	SLAP domain
GGJMDCOG_02031	6.35e-28	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
GGJMDCOG_02033	4.56e-191	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
GGJMDCOG_02035	3.6e-101	-	-	-	K	-	-	-	DNA-templated transcription, initiation
GGJMDCOG_02036	2.85e-54	-	-	-	-	-	-	-	-
GGJMDCOG_02038	6.62e-161	-	-	-	S	-	-	-	SLAP domain
GGJMDCOG_02040	2.09e-286	-	-	-	NU	-	-	-	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
GGJMDCOG_02041	7.32e-232	-	3.2.1.96, 3.5.1.28	GH73	M	ko:K01227,ko:K01447,ko:K13714,ko:K13731	ko00511,ko05100,map00511,map05100	ko00000,ko00001,ko01000	N-acetylmuramoyl-L-alanine amidase
GGJMDCOG_02042	0.0	yjbQ	-	-	P	ko:K03455,ko:K03499	-	ko00000,ko02000	TrkA C-terminal domain protein
GGJMDCOG_02043	2.47e-138	pcp	3.4.19.3	-	O	ko:K01304	-	ko00000,ko01000,ko01002	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
GGJMDCOG_02044	1.68e-207	-	-	-	S	-	-	-	Oxidoreductase family, NAD-binding Rossmann fold
GGJMDCOG_02045	1.98e-168	-	-	-	-	-	-	-	-
GGJMDCOG_02046	1.72e-149	-	-	-	-	-	-	-	-
GGJMDCOG_02047	4.51e-171	gpmA	5.4.2.11	-	G	ko:K01834	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
GGJMDCOG_02048	5.18e-128	-	-	-	G	-	-	-	Aldose 1-epimerase
GGJMDCOG_02049	2.92e-258	brpA	-	-	K	-	-	-	Cell envelope-like function transcriptional attenuator common domain protein
GGJMDCOG_02050	1.03e-145	plsY1	2.3.1.15	-	I	ko:K08591	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
GGJMDCOG_02051	0.0	XK27_08315	-	-	M	-	-	-	Sulfatase
GGJMDCOG_02052	6.31e-84	-	-	-	-	-	-	-	-
GGJMDCOG_02053	2.62e-69	-	-	-	-	-	-	-	-
GGJMDCOG_02055	4.4e-165	-	-	-	S	-	-	-	PAS domain
GGJMDCOG_02056	0.0	-	-	-	V	-	-	-	ABC transporter transmembrane region
GGJMDCOG_02057	1.28e-228	pepR	3.4.11.5	-	E	ko:K01259	ko00330,map00330	ko00000,ko00001,ko01000,ko01002	Releases the N-terminal proline from various substrates
GGJMDCOG_02058	1.75e-168	-	-	-	T	-	-	-	Transcriptional regulatory protein, C terminal
GGJMDCOG_02059	2.37e-242	-	-	-	T	-	-	-	GHKL domain
GGJMDCOG_02060	2.88e-98	ykoJ	-	-	S	-	-	-	Peptidase propeptide and YPEB domain
GGJMDCOG_02061	5.59e-109	-	-	-	S	-	-	-	Peptidase propeptide and YPEB domain
GGJMDCOG_02062	8e-108	XK27_03150	2.3.1.57	-	K	ko:K22441	-	ko00000,ko01000	Acetyltransferase (GNAT) domain
GGJMDCOG_02063	8.64e-85	yybA	-	-	K	-	-	-	Transcriptional regulator
GGJMDCOG_02064	2.91e-83	-	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter transmembrane region
GGJMDCOG_02065	1.13e-201	-	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter transmembrane region
GGJMDCOG_02066	0.0	oppA	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
GGJMDCOG_02067	1.73e-79	-	-	-	S	ko:K08987	-	ko00000	Protein of unknown function (DUF1304)
GGJMDCOG_02068	1.45e-36	-	-	-	S	-	-	-	Peptidase propeptide and YPEB domain
GGJMDCOG_02069	2.15e-299	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
GGJMDCOG_02070	3.99e-56	-	-	-	L	-	-	-	PFAM transposase IS116 IS110 IS902
GGJMDCOG_02071	1.24e-75	-	-	-	S	-	-	-	Peptidase propeptide and YPEB domain
GGJMDCOG_02072	1.48e-134	efp	-	-	J	ko:K02356	-	ko00000,ko03012	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
GGJMDCOG_02073	1.95e-218	coaA	2.7.1.33	-	F	ko:K00867	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Pantothenic acid kinase
GGJMDCOG_02074	1.88e-125	-	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase
GGJMDCOG_02075	1.36e-96	yjcF	-	-	S	-	-	-	Acetyltransferase (GNAT) domain
GGJMDCOG_02076	7.09e-184	aatB	-	-	ET	ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter substrate-binding protein
GGJMDCOG_02077	9.78e-136	glnQ	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	ABC transporter
GGJMDCOG_02078	3e-139	yecS_2	-	-	P	ko:K02029,ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter permease
GGJMDCOG_02079	0.0	helD	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	DNA helicase
GGJMDCOG_02080	1.51e-150	XK27_08875	-	-	O	-	-	-	PFAM peptidase M10A and M12B, matrixin and adamalysin
GGJMDCOG_02081	7.53e-163	gpm2	-	-	G	-	-	-	Phosphoglycerate mutase family
GGJMDCOG_02082	1.87e-308	-	-	-	S	-	-	-	response to antibiotic
GGJMDCOG_02083	1.34e-162	-	-	-	-	-	-	-	-
GGJMDCOG_02084	0.0	pacL3	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	P-type ATPase
GGJMDCOG_02085	6.28e-87	-	2.7.1.191	-	G	ko:K02793	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system fructose IIA component
GGJMDCOG_02086	1.42e-57	-	-	-	-	-	-	-	-
GGJMDCOG_02087	4.65e-14	-	-	-	-	-	-	-	-
GGJMDCOG_02088	7.81e-238	ansA	3.5.1.1	-	EJ	ko:K01424	ko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110	ko00000,ko00001,ko01000	L-asparaginase, type I
GGJMDCOG_02089	8.28e-176	-	-	-	K	ko:K03481	-	ko00000,ko03000	Helix-turn-helix domain, rpiR family
GGJMDCOG_02090	0.0	malH	3.2.1.122	GH4	G	ko:K01232	ko00500,map00500	ko00000,ko00001,ko01000	Family 4 glycosyl hydrolase C-terminal domain
GGJMDCOG_02091	8.75e-197	-	-	-	-	-	-	-	-
GGJMDCOG_02092	3.32e-13	-	-	-	-	-	-	-	-
GGJMDCOG_02093	5.45e-121	hpt	2.4.2.8	-	F	ko:K00760	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the purine pyrimidine phosphoribosyltransferase family
GGJMDCOG_02094	5.6e-135	-	-	-	K	ko:K06977	-	ko00000	acetyltransferase
GGJMDCOG_02097	4.92e-20	-	-	-	S	ko:K03328	-	ko00000	Membrane protein involved in the export of O-antigen and teichoic acid
GGJMDCOG_02098	1.23e-58	-	-	-	S	-	-	-	polysaccharide biosynthetic process
GGJMDCOG_02099	6.06e-41	-	-	-	S	ko:K09963	-	ko00000	Bacterial protein of unknown function (DUF871)
GGJMDCOG_02100	2.24e-29	-	-	-	S	ko:K09963	-	ko00000	Bacterial protein of unknown function (DUF871)
GGJMDCOG_02101	0.0	XK27_00340	3.1.3.5	-	F	ko:K01081	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the 5'-nucleotidase family
GGJMDCOG_02102	1.93e-56	-	-	-	L	-	-	-	Transposase DDE domain
GGJMDCOG_02104	4.63e-250	-	-	-	L	-	-	-	COG2826 Transposase and inactivated derivatives, IS30 family
GGJMDCOG_02107	1.25e-248	-	-	-	K	-	-	-	IrrE N-terminal-like domain
GGJMDCOG_02108	3.95e-74	-	-	-	-	-	-	-	-
GGJMDCOG_02109	6.84e-15	-	-	-	V	-	-	-	Abi-like protein
GGJMDCOG_02110	0.0	-	-	-	L	-	-	-	AAA domain
GGJMDCOG_02112	8.06e-08	-	-	-	S	ko:K07011	-	ko00000	Glycosyltransferase like family 2
GGJMDCOG_02114	9.92e-152	cps3J	-	-	M	-	-	-	Domain of unknown function (DUF4422)
GGJMDCOG_02115	2.91e-140	epsE2	-	-	M	-	-	-	Bacterial sugar transferase
GGJMDCOG_02116	2.22e-184	ywqE	3.1.3.48	-	GM	ko:K01104	-	ko00000,ko01000	PHP domain protein
GGJMDCOG_02117	5.61e-160	ywqD	-	-	D	-	-	-	Capsular exopolysaccharide family
GGJMDCOG_02118	5.52e-187	epsB	-	-	M	-	-	-	biosynthesis protein
GGJMDCOG_02119	8.14e-241	brpA	-	-	K	-	-	-	Cell envelope-like function transcriptional attenuator common domain protein
GGJMDCOG_02121	6.72e-285	hflX	-	-	S	ko:K03665	-	ko00000,ko03009	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
GGJMDCOG_02122	1.26e-223	-	-	-	S	-	-	-	Cysteine-rich secretory protein family
GGJMDCOG_02123	3.01e-54	-	-	-	-	-	-	-	-
GGJMDCOG_02124	1.73e-167	-	-	-	M	ko:K21471	-	ko00000,ko01000,ko01002,ko01011	NlpC/P60 family
GGJMDCOG_02125	1.28e-174	-	-	-	M	ko:K21471	-	ko00000,ko01000,ko01002,ko01011	NlpC P60 family protein
GGJMDCOG_02126	1.47e-114	-	-	-	M	ko:K21471	-	ko00000,ko01000,ko01002,ko01011	NlpC/P60 family
GGJMDCOG_02127	4.26e-115	gmk2	2.7.4.8	-	F	ko:K00942	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko00002,ko01000	Guanylate kinase homologues.
GGJMDCOG_02128	4.52e-56	-	-	-	-	-	-	-	-
GGJMDCOG_02129	0.0	-	-	-	S	-	-	-	O-antigen ligase like membrane protein
GGJMDCOG_02130	8.77e-144	-	-	-	-	-	-	-	-
GGJMDCOG_02131	5.48e-283	tnpB	-	-	L	ko:K07496	-	ko00000	Putative transposase DNA-binding domain
GGJMDCOG_02132	3.7e-40	nrdI	-	-	F	ko:K03647	-	ko00000	NrdI Flavodoxin like
GGJMDCOG_02133	1.96e-226	nrdF	1.17.4.1	-	F	ko:K00526	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
GGJMDCOG_02134	1.16e-101	-	-	-	-	-	-	-	-
GGJMDCOG_02135	1.58e-143	-	-	-	S	-	-	-	Peptidase_C39 like family
GGJMDCOG_02136	7.36e-109	-	-	-	S	-	-	-	Threonine/Serine exporter, ThrE
GGJMDCOG_02137	7.35e-174	-	-	-	S	-	-	-	Putative threonine/serine exporter
GGJMDCOG_02138	0.0	-	-	-	S	-	-	-	ABC transporter
GGJMDCOG_02139	2.52e-76	-	-	-	-	-	-	-	-
GGJMDCOG_02140	8.69e-93	rimL	-	-	J	ko:K03817	-	ko00000,ko01000,ko03009	Acetyltransferase (GNAT) domain
GGJMDCOG_02141	5.49e-46	-	-	-	-	-	-	-	-
GGJMDCOG_02142	7.2e-40	-	-	-	-	-	-	-	-
GGJMDCOG_02143	2.33e-143	-	-	-	S	ko:K07150	-	ko00000	Protein of unknown function (DUF554)
GGJMDCOG_02144	5.74e-256	brpA	-	-	K	-	-	-	Cell envelope-like function transcriptional attenuator common domain protein
GGJMDCOG_02145	0.0	pepF	-	-	E	ko:K08602	-	ko00000,ko01000,ko01002	oligoendopeptidase F
GGJMDCOG_02146	7.27e-42	-	-	-	-	-	-	-	-
GGJMDCOG_02147	1.47e-91	doc	-	-	S	ko:K07341	-	ko00000,ko02048	Prophage maintenance system killer protein
GGJMDCOG_02150	4.61e-37	-	-	-	S	-	-	-	Enterocin A Immunity