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ORF_ID	e_value	Gene_name	EC_number	CAZy	COGs	KEGG_ko	KEGG_Pathway	BRITE	Description
DPAKAGIC_00001	3.27e-294	-	-	-	E	ko:K03294	-	ko00000	amino acid
DPAKAGIC_00002	9.79e-168	lys	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
DPAKAGIC_00003	2.35e-269	yfmL	-	-	L	-	-	-	DEAD DEAH box helicase
DPAKAGIC_00004	5.88e-312	chbC	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
DPAKAGIC_00007	2.81e-279	mnaA	5.1.3.14	-	G	ko:K01791	ko00520,ko01100,ko05111,map00520,map01100,map05111	ko00000,ko00001,ko00002,ko01000,ko01005	Belongs to the UDP-N-acetylglucosamine 2-epimerase family
DPAKAGIC_00008	4.67e-116	gtcA1	-	-	S	-	-	-	Teichoic acid glycosylation protein
DPAKAGIC_00009	8.53e-104	ykuP	-	-	C	ko:K03839	-	ko00000	Flavodoxin
DPAKAGIC_00010	7.02e-211	map	3.4.11.18	-	E	ko:K01265	-	ko00000,ko01000,ko01002	Methionine Aminopeptidase
DPAKAGIC_00011	1.14e-203	rbn	-	-	S	ko:K07058	-	ko00000	Belongs to the UPF0761 family
DPAKAGIC_00012	6.78e-217	galU	2.7.7.9	-	M	ko:K00963	ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	UTP-glucose-1-phosphate uridylyltransferase
DPAKAGIC_00013	3.81e-275	atoB	1.1.1.88, 2.3.1.9	-	I	ko:K00054,ko:K00626	ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the thiolase family
DPAKAGIC_00014	3.42e-278	mvaA	1.1.1.88, 2.3.1.9	-	C	ko:K00054,ko:K00626	ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the HMG-CoA reductase family
DPAKAGIC_00015	3.82e-276	mvaS	2.3.3.10	-	I	ko:K01641	ko00072,ko00280,ko00650,ko00900,ko01100,ko01110,ko01130,map00072,map00280,map00650,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Hydroxymethylglutaryl-CoA synthase
DPAKAGIC_00016	2.95e-61	-	-	-	-	-	-	-	-
DPAKAGIC_00017	2.13e-227	ybcH	-	-	D	ko:K06889	-	ko00000	Alpha beta
DPAKAGIC_00018	0.0	rumA_1	2.1.1.190, 2.1.1.35	-	J	ko:K00557,ko:K03215	-	ko00000,ko01000,ko03009,ko03016	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
DPAKAGIC_00019	4.13e-187	recX	-	-	S	ko:K03565	-	ko00000,ko03400	Regulatory protein RecX
DPAKAGIC_00020	7.42e-112	-	-	-	-	-	-	-	-
DPAKAGIC_00021	1.02e-93	-	-	-	-	-	-	-	-
DPAKAGIC_00022	1.24e-201	hlyX	-	-	S	ko:K03699	-	ko00000,ko02042	Transporter associated domain
DPAKAGIC_00023	0.0	prfC	-	-	J	ko:K02837	-	ko00000,ko03012	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
DPAKAGIC_00024	3.43e-59	XK27_09445	-	-	S	-	-	-	Domain of unknown function (DUF1827)
DPAKAGIC_00025	0.0	clpE	-	-	O	ko:K03697	-	ko00000,ko03110	Belongs to the ClpA ClpB family
DPAKAGIC_00026	9.05e-55	ptsH	-	-	G	ko:K11189	-	ko00000,ko02000	phosphocarrier protein HPR
DPAKAGIC_00027	0.0	ptsI	2.7.3.9	-	G	ko:K08483	ko02060,map02060	ko00000,ko00001,ko01000,ko02000	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
DPAKAGIC_00028	1.08e-87	spxA	-	-	K	ko:K16509	-	ko00000	Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
DPAKAGIC_00029	2.91e-175	mecA	-	-	NOT	ko:K16511	-	ko00000	Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
DPAKAGIC_00030	2.56e-209	coiA	-	-	S	ko:K06198	-	ko00000	Competence protein
DPAKAGIC_00031	7.54e-149	yjbH	-	-	Q	-	-	-	Thioredoxin
DPAKAGIC_00032	1.46e-145	-	-	-	S	-	-	-	CYTH
DPAKAGIC_00033	1.15e-145	yjbM	2.7.6.5	-	S	ko:K07816	ko00230,map00230	ko00000,ko00001,ko01000	RelA SpoT domain protein
DPAKAGIC_00034	5.49e-195	nadK	2.7.1.23	-	F	ko:K00858	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
DPAKAGIC_00035	1.81e-221	rluD2	5.4.99.23	-	J	ko:K06180	-	ko00000,ko01000,ko03009	Responsible for synthesis of pseudouridine from uracil
DPAKAGIC_00036	0.0	mycA	4.2.1.53	-	S	ko:K10254	-	ko00000,ko01000	Myosin-crossreactive antigen
DPAKAGIC_00037	8.93e-153	-	-	-	S	-	-	-	SNARE associated Golgi protein
DPAKAGIC_00038	1.06e-257	pgl	3.1.1.31	-	G	ko:K07404	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Lactonase, 7-bladed beta-propeller
DPAKAGIC_00039	0.0	pacL	-	-	P	-	-	-	Cation transporter/ATPase, N-terminus
DPAKAGIC_00040	8.1e-87	srlB	2.7.1.198	-	G	ko:K02781	ko00051,ko02060,map00051,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system glucitol/sorbitol-specific IIA component
DPAKAGIC_00041	8.9e-270	XK27_05220	-	-	S	-	-	-	AI-2E family transporter
DPAKAGIC_00042	1.75e-134	cspR	2.1.1.207	-	J	ko:K03216	-	ko00000,ko01000,ko03016	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
DPAKAGIC_00043	1.28e-89	-	-	-	S	-	-	-	Protein of unknown function (DUF1149)
DPAKAGIC_00044	0.0	ftsK	-	-	D	ko:K03466	-	ko00000,ko03036	Belongs to the FtsK SpoIIIE SftA family
DPAKAGIC_00045	4.09e-291	ymfF	-	-	S	-	-	-	Peptidase M16 inactive domain protein
DPAKAGIC_00046	2.26e-306	ymfH	-	-	S	-	-	-	Peptidase M16
DPAKAGIC_00047	8.02e-171	fabG	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Enoyl-(Acyl carrier protein) reductase
DPAKAGIC_00048	1.43e-160	ymfM	-	-	S	ko:K15539	-	ko00000	Helix-turn-helix domain
DPAKAGIC_00049	1.73e-126	pgsA	2.7.8.5	-	I	ko:K00995	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
DPAKAGIC_00050	6.24e-247	recA	-	-	L	ko:K03553	ko03440,map03440	ko00000,ko00001,ko00002,ko03400	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
DPAKAGIC_00051	1.29e-293	rny	-	-	S	ko:K18682	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	Endoribonuclease that initiates mRNA decay
DPAKAGIC_00052	3.37e-271	tagO	2.7.8.33, 2.7.8.35	-	M	ko:K02851	-	ko00000,ko01000,ko01003,ko01005	transferase
DPAKAGIC_00053	2.05e-153	yvyE	3.4.13.9	-	S	ko:K01271	-	ko00000,ko01000,ko01002	YigZ family
DPAKAGIC_00054	8.33e-314	comFA	-	-	L	ko:K02240	-	ko00000,ko00002,ko02044	Helicase C-terminal domain protein
DPAKAGIC_00055	7.21e-173	comFC	-	-	S	ko:K02242	-	ko00000,ko00002,ko02044	Competence protein
DPAKAGIC_00056	1.75e-123	hpf	-	-	J	ko:K05808	-	ko00000,ko03009	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
DPAKAGIC_00057	0.0	secA	-	-	U	ko:K03070	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
DPAKAGIC_00058	6.43e-238	prfB	-	-	J	ko:K02836	-	ko00000,ko03012	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
DPAKAGIC_00059	1.88e-21	-	-	-	-	-	-	-	-
DPAKAGIC_00060	6.85e-228	hprK	-	-	F	ko:K06023	-	ko00000,ko01000	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
DPAKAGIC_00061	4.36e-205	lgt	-	-	M	ko:K13292	-	ko00000,ko01000	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
DPAKAGIC_00062	1.71e-241	gpsA	1.1.1.94	-	I	ko:K00057	ko00564,ko01110,map00564,map01110	ko00000,ko00001,ko01000	Glycerol-3-phosphate dehydrogenase
DPAKAGIC_00063	9.38e-228	trxB	1.8.1.9	-	C	ko:K00384	ko00450,map00450	ko00000,ko00001,ko01000	Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
DPAKAGIC_00064	0.0	glgB	2.4.1.18	CBM48,GH13	G	ko:K00700	ko00500,ko01100,ko01110,map00500,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
DPAKAGIC_00065	4.02e-284	glgC	2.7.7.27	-	H	ko:K00975	ko00500,ko00520,ko01100,ko01110,ko02026,map00500,map00520,map01100,map01110,map02026	ko00000,ko00001,ko00002,ko01000	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
DPAKAGIC_00066	5.82e-272	glgD	2.7.7.27	-	G	ko:K00975	ko00500,ko00520,ko01100,ko01110,ko02026,map00500,map00520,map01100,map01110,map02026	ko00000,ko00001,ko00002,ko01000	Nucleotidyl transferase
DPAKAGIC_00067	0.0	glgA	2.4.1.21	GT5	F	ko:K00703	ko00500,ko01100,ko01110,ko02026,map00500,map01100,map01110,map02026	ko00000,ko00001,ko00002,ko01000,ko01003	Synthesizes alpha-1,4-glucan chains using ADP-glucose
DPAKAGIC_00068	0.0	glgP	2.4.1.1	GT35	G	ko:K00688	ko00500,ko01100,ko01110,ko02026,ko04217,ko04910,ko04922,ko04931,map00500,map01100,map01110,map02026,map04217,map04910,map04922,map04931	ko00000,ko00001,ko01000	Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
DPAKAGIC_00069	0.0	malZ	3.2.1.20, 3.2.1.41	CBM48,GH13,GH31	G	ko:K01187,ko:K01200	ko00052,ko00500,ko01100,ko01110,map00052,map00500,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 13 family
DPAKAGIC_00070	0.0	pgm	5.4.2.2	-	G	ko:K01835	ko00010,ko00030,ko00052,ko00230,ko00500,ko00520,ko00521,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00052,map00230,map00500,map00520,map00521,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
DPAKAGIC_00071	0.0	uvrB	-	-	L	ko:K03702	ko03420,map03420	ko00000,ko00001,ko03400	damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
DPAKAGIC_00072	0.0	uvrA	-	-	L	ko:K03701	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
DPAKAGIC_00073	3.8e-118	-	-	-	S	-	-	-	Short repeat of unknown function (DUF308)
DPAKAGIC_00074	6e-212	yvcJ	-	-	S	ko:K06958	-	ko00000,ko03019	Displays ATPase and GTPase activities
DPAKAGIC_00075	3.24e-250	yvcK	-	-	S	-	-	-	Required for morphogenesis under gluconeogenic growth conditions
DPAKAGIC_00076	1.17e-218	whiA	-	-	K	ko:K09762	-	ko00000	May be required for sporulation
DPAKAGIC_00077	2.16e-129	clpP	3.4.21.92	-	O	ko:K01358	ko04112,ko04212,map04112,map04212	ko00000,ko00001,ko01000,ko01002	Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
DPAKAGIC_00078	0.0	-	-	-	S	-	-	-	SH3-like domain
DPAKAGIC_00079	0.0	ycaM	-	-	E	-	-	-	amino acid
DPAKAGIC_00081	5.75e-242	cggR	-	-	K	ko:K05311	-	ko00000,ko03000	Putative sugar-binding domain
DPAKAGIC_00082	4.74e-243	gap	1.2.1.12	-	G	ko:K00134	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
DPAKAGIC_00083	9.96e-287	pgk	2.7.2.3	-	F	ko:K00927	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the phosphoglycerate kinase family
DPAKAGIC_00084	2.71e-183	tpiA	5.3.1.1	-	G	ko:K01803	ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
DPAKAGIC_00085	1.07e-125	-	-	-	-	-	-	-	-
DPAKAGIC_00086	1.02e-202	ycsE	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
DPAKAGIC_00087	1.15e-174	ung	3.2.2.27	-	L	ko:K03648	ko03410,ko05340,map03410,map05340	ko00000,ko00001,ko01000,ko03400	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
DPAKAGIC_00088	3.84e-233	pta	2.3.1.8, 3.6.3.21	-	C	ko:K00625,ko:K02028	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000,ko02000	phosphate acetyltransferase
DPAKAGIC_00089	4.82e-113	ydiB	-	-	O	ko:K06925	-	ko00000,ko03016	Hydrolase, P-loop family
DPAKAGIC_00090	5.26e-128	dnaQ	2.7.7.7	-	L	ko:K02342	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III
DPAKAGIC_00091	7.27e-211	murB	1.3.1.98	-	M	ko:K00075	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation
DPAKAGIC_00092	2.94e-262	potA	3.6.3.30, 3.6.3.31	-	P	ko:K02010,ko:K11072	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
DPAKAGIC_00093	1.04e-180	potB	-	-	P	ko:K11071	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
DPAKAGIC_00094	2.65e-179	potC	-	-	P	ko:K11070	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
DPAKAGIC_00095	9.5e-264	potD	-	-	P	ko:K11069	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
DPAKAGIC_00096	1.06e-194	dacA	2.7.7.85	-	S	ko:K18672	-	ko00000,ko01000	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
DPAKAGIC_00097	3.38e-221	ybbR	-	-	S	-	-	-	YbbR-like protein
DPAKAGIC_00098	0.0	glmM	5.4.2.10	-	G	ko:K03431	ko00520,ko01100,ko01130,map00520,map01100,map01130	ko00000,ko00001,ko01000	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
DPAKAGIC_00099	4.85e-191	-	-	-	S	-	-	-	hydrolase
DPAKAGIC_00100	1.45e-187	-	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
DPAKAGIC_00101	7.3e-156	-	-	-	-	-	-	-	-
DPAKAGIC_00102	2.73e-111	ptpA	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
DPAKAGIC_00103	1.37e-269	glxK	2.7.1.165	-	G	ko:K00865	ko00260,ko00561,ko00630,ko01100,ko01120,ko01130,map00260,map00561,map00630,map01100,map01120,map01130	ko00000,ko00001,ko01000	Belongs to the glycerate kinase type-1 family
DPAKAGIC_00104	4.66e-196	bglG5	-	-	K	ko:K03488	-	ko00000,ko03000	CAT RNA binding domain
DPAKAGIC_00105	0.0	pts33BCA	-	-	G	ko:K02755,ko:K02756,ko:K02757	ko02060,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
DPAKAGIC_00106	0.0	-	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
DPAKAGIC_00107	6.14e-232	ybcH	-	-	D	ko:K06889	-	ko00000	Alpha beta
DPAKAGIC_00108	0.0	-	-	-	E	-	-	-	Amino acid permease
DPAKAGIC_00110	1.96e-37	rpsN	-	-	J	ko:K02954	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
DPAKAGIC_00111	2.34e-119	-	-	-	S	-	-	-	VanZ like family
DPAKAGIC_00112	1.97e-171	yebC	-	-	K	-	-	-	Transcriptional regulatory protein
DPAKAGIC_00113	1.38e-228	comGA	-	-	NU	ko:K02243	-	ko00000,ko00002,ko02044	Type II IV secretion system protein
DPAKAGIC_00114	5.57e-224	comGB	-	-	NU	ko:K02244	-	ko00000,ko00002,ko02044	type II secretion system
DPAKAGIC_00115	1.55e-65	comGC	-	-	U	ko:K02245	-	ko00000,ko00002,ko02044	competence protein ComGC
DPAKAGIC_00116	9e-94	-	-	-	-	ko:K02246	-	ko00000,ko00002,ko02044	-
DPAKAGIC_00117	1.33e-25	-	-	-	-	-	-	-	-
DPAKAGIC_00118	2.61e-120	-	-	-	U	ko:K02248	-	ko00000,ko00002,ko02044	Putative Competence protein ComGF
DPAKAGIC_00119	4.19e-239	ytxK	2.1.1.72	-	L	ko:K00571	-	ko00000,ko01000,ko02048	N-6 DNA Methylase
DPAKAGIC_00120	1.35e-284	ackA	2.7.2.1	-	F	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
DPAKAGIC_00122	1.05e-170	-	-	-	M	-	-	-	Protein of unknown function (DUF3737)
DPAKAGIC_00123	3.52e-224	patB	4.4.1.8	-	E	ko:K14155	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko01000,ko01007	Aminotransferase, class I
DPAKAGIC_00124	4.53e-41	-	4.4.1.8	-	E	ko:K14155	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko01000,ko01007	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
DPAKAGIC_00125	1.86e-245	manA	5.3.1.8	-	G	ko:K01809	ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	mannose-6-phosphate isomerase
DPAKAGIC_00126	1.68e-81	-	-	-	S	-	-	-	SdpI/YhfL protein family
DPAKAGIC_00127	1.97e-170	-	-	-	K	-	-	-	Transcriptional regulatory protein, C terminal
DPAKAGIC_00128	0.0	yclK	-	-	T	-	-	-	Histidine kinase
DPAKAGIC_00129	4.37e-81	XK27_00915	-	-	C	-	-	-	Luciferase-like monooxygenase
DPAKAGIC_00130	1.53e-159	XK27_00915	-	-	C	-	-	-	Luciferase-like monooxygenase
DPAKAGIC_00131	0.0	ltaS	2.7.8.20	-	M	ko:K19005	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
DPAKAGIC_00132	1.93e-139	vanZ	-	-	V	-	-	-	VanZ like family
DPAKAGIC_00133	0.0	pgi	5.3.1.9	-	G	ko:K01810	ko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the GPI family
DPAKAGIC_00134	5.4e-316	-	-	-	EGP	-	-	-	Major Facilitator
DPAKAGIC_00135	7.36e-251	ampC	-	-	V	-	-	-	Beta-lactamase
DPAKAGIC_00138	2.17e-85	-	-	-	-	-	-	-	-
DPAKAGIC_00139	0.0	-	-	-	S	ko:K06919	-	ko00000	DNA primase
DPAKAGIC_00140	1.18e-47	-	-	-	-	-	-	-	-
DPAKAGIC_00141	6.8e-46	-	-	-	-	-	-	-	-
DPAKAGIC_00142	3.84e-90	-	-	-	-	-	-	-	-
DPAKAGIC_00143	2.58e-49	-	-	-	-	-	-	-	-
DPAKAGIC_00145	3.5e-75	-	-	-	K	-	-	-	Transcriptional
DPAKAGIC_00146	1.58e-266	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
DPAKAGIC_00147	0.0	murE2	6.3.2.13	-	M	ko:K01928	ko00300,ko00550,map00300,map00550	ko00000,ko00001,ko01000,ko01011	Domain of unknown function (DUF1727)
DPAKAGIC_00148	4.64e-146	tdk	2.7.1.21	-	F	ko:K00857	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	thymidine kinase
DPAKAGIC_00149	1.01e-235	prfA	-	-	J	ko:K02835	-	ko00000,ko03012	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
DPAKAGIC_00150	2.52e-202	prmC	2.1.1.297	-	J	ko:K02493	-	ko00000,ko01000,ko03012	Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
DPAKAGIC_00151	4.93e-243	ywlC	2.7.7.87	-	J	ko:K07566	-	ko00000,ko01000,ko03009,ko03016	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
DPAKAGIC_00152	1.84e-146	upp	2.4.2.9	-	F	ko:K00761	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
DPAKAGIC_00153	4.13e-166	atpB	-	-	C	ko:K02108	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko03110	it plays a direct role in the translocation of protons across the membrane
DPAKAGIC_00154	4.36e-39	atpE	-	-	C	ko:K02110	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
DPAKAGIC_00155	4.97e-95	atpF	-	-	C	ko:K02109	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
DPAKAGIC_00156	6.82e-122	atpH	-	-	C	ko:K02113	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
DPAKAGIC_00157	0.0	atpA	3.6.3.14	-	C	ko:K02111	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko01000	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
DPAKAGIC_00158	1.22e-220	atpG	-	-	C	ko:K02115	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
DPAKAGIC_00159	0.0	atpD	3.6.3.14	-	C	ko:K02112	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko01000	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
DPAKAGIC_00160	7.03e-93	atpC	-	-	C	ko:K02114	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Produces ATP from ADP in the presence of a proton gradient across the membrane
DPAKAGIC_00161	4.22e-41	-	-	-	S	-	-	-	Protein of unknown function (DUF1146)
DPAKAGIC_00162	2.04e-228	mbl	-	-	D	ko:K03569	-	ko00000,ko02048,ko03036,ko04812	Cell shape determining protein MreB Mrl
DPAKAGIC_00163	7.58e-67	ytjA	-	-	S	ko:K08998	-	ko00000	Could be involved in insertion of integral membrane proteins into the membrane
DPAKAGIC_00164	1.26e-46	-	-	-	S	-	-	-	Protein of unknown function (DUF2969)
DPAKAGIC_00165	1.18e-275	rodA	-	-	D	ko:K05837	-	ko00000,ko03036	Belongs to the SEDS family
DPAKAGIC_00166	6.39e-102	uspA	-	-	T	-	-	-	universal stress protein
DPAKAGIC_00167	1.41e-49	-	-	-	-	-	-	-	-
DPAKAGIC_00168	1.18e-310	rarA	-	-	L	ko:K07478	-	ko00000	recombination factor protein RarA
DPAKAGIC_00169	9.44e-109	-	-	-	S	-	-	-	Protein of unknown function (DUF1694)
DPAKAGIC_00170	1.07e-142	rpsD	-	-	J	ko:K02986	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
DPAKAGIC_00171	0.0	ezrA	-	-	D	ko:K06286	-	ko00000,ko03036	modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
DPAKAGIC_00172	1.29e-278	iscS2	2.8.1.7	-	E	ko:K04487	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko02048,ko03016,ko03029	Aminotransferase class V
DPAKAGIC_00173	4.62e-293	thiI	2.8.1.4	-	H	ko:K03151	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko03016	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
DPAKAGIC_00174	1.56e-165	rsuA	5.4.99.19	-	J	ko:K06183	-	ko00000,ko01000,ko03009	Belongs to the pseudouridine synthase RsuA family
DPAKAGIC_00175	0.0	valS	6.1.1.9	-	J	ko:K01873	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
DPAKAGIC_00176	2.55e-306	folC	6.3.2.12, 6.3.2.17	-	H	ko:K11754	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the folylpolyglutamate synthase family
DPAKAGIC_00177	1.83e-163	-	-	-	S	-	-	-	Haloacid dehalogenase-like hydrolase
DPAKAGIC_00178	2.34e-148	radC	-	-	L	ko:K03630	-	ko00000	DNA repair protein
DPAKAGIC_00179	2.03e-226	mreB	-	-	D	ko:K03569	-	ko00000,ko02048,ko03036,ko04812	cell shape determining protein MreB
DPAKAGIC_00180	1.82e-192	mreC	-	-	M	ko:K03570	-	ko00000,ko03036	Involved in formation and maintenance of cell shape
DPAKAGIC_00181	6.61e-123	mreD	-	-	-	ko:K03571	-	ko00000,ko03036	-
DPAKAGIC_00182	1.45e-14	-	-	-	S	-	-	-	Protein of unknown function (DUF4044)
DPAKAGIC_00183	4.84e-71	-	-	-	S	-	-	-	Protein of unknown function (DUF3397)
DPAKAGIC_00184	3.95e-93	mraZ	-	-	K	ko:K03925	-	ko00000	Belongs to the MraZ family
DPAKAGIC_00185	5.41e-226	rsmH	2.1.1.199	-	J	ko:K03438	-	ko00000,ko01000,ko03009	Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
DPAKAGIC_00186	1.32e-71	ftsL	-	-	D	-	-	-	Cell division protein FtsL
DPAKAGIC_00187	0.0	pbpX	-	-	M	ko:K08724,ko:K12552,ko:K12556	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01011	Penicillin-binding Protein
DPAKAGIC_00188	8e-227	mraY	2.7.8.13	-	M	ko:K01000	ko00550,ko01100,ko01502,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
DPAKAGIC_00189	0.0	murD	6.3.2.9	-	M	ko:K01925	ko00471,ko00550,ko01100,map00471,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
DPAKAGIC_00190	4.93e-267	murG	2.4.1.227	GT28	M	ko:K02563	ko00550,ko01100,ko01502,ko04112,map00550,map01100,map01502,map04112	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
DPAKAGIC_00191	1.71e-182	divIB	-	-	D	ko:K03589	ko04112,map04112	ko00000,ko00001,ko03036	Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
DPAKAGIC_00192	1.02e-312	ftsA	-	-	D	ko:K03590	ko04112,map04112	ko00000,ko00001,ko03036,ko04812	Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
DPAKAGIC_00193	5.9e-313	ftsZ	-	-	D	ko:K03531	ko04112,map04112	ko00000,ko00001,ko02048,ko03036,ko04812	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
DPAKAGIC_00194	4.09e-96	sepF	-	-	D	ko:K09772	-	ko00000,ko03036	Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
DPAKAGIC_00195	1.36e-39	yggT	-	-	S	ko:K02221	-	ko00000,ko02044	YGGT family
DPAKAGIC_00196	4.87e-193	ylmH	-	-	S	-	-	-	S4 domain protein
DPAKAGIC_00197	1.18e-141	divIVA	-	-	D	ko:K04074	-	ko00000,ko03036	DivIVA domain protein
DPAKAGIC_00198	0.0	ileS	6.1.1.5	-	J	ko:K01870	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
DPAKAGIC_00199	8.09e-44	cspA	-	-	K	ko:K03704	-	ko00000,ko03000	'Cold-shock' DNA-binding domain
DPAKAGIC_00200	6.29e-135	nudF	3.6.1.13	-	L	ko:K01515	ko00230,map00230	ko00000,ko00001,ko01000	ADP-ribose pyrophosphatase
DPAKAGIC_00201	4.49e-42	-	-	-	-	-	-	-	-
DPAKAGIC_00202	1.02e-163	mtnN	3.2.2.9	-	E	ko:K01243	ko00270,ko01100,ko01230,map00270,map01100,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
DPAKAGIC_00203	1.47e-76	XK27_04120	-	-	S	-	-	-	Putative amino acid metabolism
DPAKAGIC_00204	1.62e-280	mnmA	2.8.1.13	-	J	ko:K00566	ko04122,map04122	ko00000,ko00001,ko01000,ko03016	Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
DPAKAGIC_00205	1.58e-161	pgm	-	-	G	-	-	-	Phosphoglycerate mutase family
DPAKAGIC_00206	2.93e-150	-	-	-	S	-	-	-	repeat protein
DPAKAGIC_00207	0.0	recD2	3.1.11.5	-	L	ko:K03581	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
DPAKAGIC_00208	0.0	-	-	-	L	-	-	-	Nuclease-related domain
DPAKAGIC_00209	1.29e-233	ytlR	-	-	I	-	-	-	Diacylglycerol kinase catalytic domain
DPAKAGIC_00210	0.0	rnjA	-	-	J	ko:K12574	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
DPAKAGIC_00211	3.13e-46	ykzG	-	-	S	-	-	-	Belongs to the UPF0356 family
DPAKAGIC_00212	2.52e-131	def	3.5.1.88	-	J	ko:K01462	-	ko00000,ko01000	Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
DPAKAGIC_00213	0.0	typA	-	-	T	ko:K06207	-	ko00000	GTP-binding protein TypA
DPAKAGIC_00214	2.75e-268	ftsW	-	-	D	ko:K03588	ko04112,map04112	ko00000,ko00001,ko02000,ko03036	Belongs to the SEDS family
DPAKAGIC_00215	4.73e-69	ylbG	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2129)
DPAKAGIC_00216	5.62e-126	rsmD	2.1.1.171	-	L	ko:K08316	-	ko00000,ko01000,ko03009	RNA methyltransferase, RsmD family
DPAKAGIC_00217	7.07e-107	coaD	2.7.7.3	-	H	ko:K00954	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
DPAKAGIC_00218	1.37e-246	lon	-	-	T	ko:K07177	ko02024,map02024	ko00000,ko00001,ko01002	Belongs to the peptidase S16 family
DPAKAGIC_00219	2.19e-131	comEA	-	-	L	ko:K02237	-	ko00000,ko00002,ko02044	Competence protein ComEA
DPAKAGIC_00220	0.0	comEC	-	-	S	ko:K02238	-	ko00000,ko00002,ko02044	Competence protein ComEC
DPAKAGIC_00221	3.38e-227	holA	2.7.7.7	-	L	ko:K02340	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III delta subunit
DPAKAGIC_00222	3.78e-48	rpsT	-	-	J	ko:K02968	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 16S ribosomal RNA
DPAKAGIC_00223	4.08e-55	rpsO	-	-	J	ko:K02956	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
DPAKAGIC_00224	0.0	rnjB	-	-	J	ko:K12574	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
DPAKAGIC_00225	1.45e-195	-	-	-	-	-	-	-	-
DPAKAGIC_00226	8.19e-287	tuf	-	-	J	ko:K02358,ko:K15771	ko02010,map02010	ko00000,ko00001,ko00002,ko02000,ko03012,ko03029,ko04147	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
DPAKAGIC_00227	3.02e-294	tig	-	-	D	ko:K03545	-	ko00000	Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
DPAKAGIC_00228	8.42e-299	clpX	-	-	O	ko:K03544	ko04112,map04112	ko00000,ko00001,ko03110	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
DPAKAGIC_00229	1.17e-138	engB	-	-	D	ko:K03978	-	ko00000,ko03036	Necessary for normal cell division and for the maintenance of normal septation
DPAKAGIC_00230	7.3e-245	dapF	5.1.1.7	-	E	ko:K01778	ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
DPAKAGIC_00231	0.0	lysC	2.7.2.4	-	E	ko:K00928	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the aspartokinase family
DPAKAGIC_00232	0.0	lysA	4.1.1.20	-	E	ko:K01586	ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
DPAKAGIC_00233	1.39e-106	dapH	2.3.1.117, 2.3.1.89	-	E	ko:K00674,ko:K05822	ko00300,ko01100,ko01110,ko01120,ko01230,map00300,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
DPAKAGIC_00234	5.48e-283	hipO	3.5.1.47	-	E	ko:K05823	ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000,ko01002	Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
DPAKAGIC_00235	1.14e-225	dapA	4.3.3.7	-	E	ko:K01714	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
DPAKAGIC_00236	1.23e-183	dapB	1.17.1.8	-	E	ko:K00215	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
DPAKAGIC_00237	2.42e-281	aspC	-	-	E	ko:K00841	ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase
DPAKAGIC_00238	4.28e-253	asd	1.2.1.11	-	E	ko:K00133	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
DPAKAGIC_00239	8.12e-262	pbpX1	-	-	V	-	-	-	Beta-lactamase
DPAKAGIC_00240	0.0	-	-	-	I	-	-	-	Protein of unknown function (DUF2974)
DPAKAGIC_00241	1.18e-55	-	-	-	C	-	-	-	FMN_bind
DPAKAGIC_00242	1.01e-104	-	-	-	-	-	-	-	-
DPAKAGIC_00243	0.0	-	-	-	-	-	-	-	-
DPAKAGIC_00244	4.65e-228	iunH	3.2.2.1	-	F	ko:K01239	ko00230,ko00760,ko01100,map00230,map00760,map01100	ko00000,ko00001,ko01000	inosine-uridine preferring nucleoside hydrolase
DPAKAGIC_00245	8.04e-188	-	-	-	-	-	-	-	-
DPAKAGIC_00249	4.23e-93	alkD	-	-	L	-	-	-	DNA alkylation repair enzyme
DPAKAGIC_00250	3.08e-52	-	-	-	S	-	-	-	Transglycosylase associated protein
DPAKAGIC_00251	6.28e-10	-	-	-	S	-	-	-	CsbD-like
DPAKAGIC_00252	0.0	pbg4	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
DPAKAGIC_00253	1.62e-166	-	-	-	K	ko:K03492	-	ko00000,ko03000	UTRA domain
DPAKAGIC_00254	4.98e-74	pts20B	2.7.1.196, 2.7.1.205	-	G	ko:K02760	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
DPAKAGIC_00255	4.75e-80	celC	2.7.1.196, 2.7.1.205	-	G	ko:K02759	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose Cellobiose specific IIA subunit
DPAKAGIC_00256	4.68e-104	-	-	-	-	-	-	-	-
DPAKAGIC_00257	1.68e-179	celD	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
DPAKAGIC_00258	2.84e-94	-	-	-	S	-	-	-	Domain of unknown function (DUF3284)
DPAKAGIC_00259	0.0	-	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
DPAKAGIC_00260	1.45e-172	-	-	-	K	ko:K03492	-	ko00000,ko03000	UTRA
DPAKAGIC_00261	1.91e-55	-	-	-	-	-	-	-	-
DPAKAGIC_00262	0.0	pts23C	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
DPAKAGIC_00263	0.0	pbg6	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
DPAKAGIC_00264	3.69e-207	ypbG	2.7.1.2	-	GK	ko:K00845	ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	ROK family
DPAKAGIC_00265	1.01e-111	yfhC	-	-	C	-	-	-	Nitroreductase family
DPAKAGIC_00266	4.93e-141	-	-	-	S	-	-	-	Domain of unknown function (DUF4767)
DPAKAGIC_00267	2.12e-312	eno	4.2.1.11	-	G	ko:K01689	ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066	ko00000,ko00001,ko00002,ko01000,ko03019,ko04147	Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
DPAKAGIC_00268	1.19e-194	-	-	-	S	-	-	-	Uncharacterised protein, DegV family COG1307
DPAKAGIC_00269	2.64e-128	-	-	-	I	-	-	-	PAP2 superfamily
DPAKAGIC_00270	1.47e-244	cbh	3.5.1.24	-	M	ko:K01442	ko00120,ko00121,ko01100,map00120,map00121,map01100	ko00000,ko00001,ko01000	Linear amide C-N hydrolase, choloylglycine hydrolase family protein
DPAKAGIC_00272	2.59e-229	int3	-	-	L	-	-	-	Belongs to the 'phage' integrase family
DPAKAGIC_00273	1.09e-34	-	-	-	-	-	-	-	-
DPAKAGIC_00274	1.98e-129	-	-	-	-	-	-	-	-
DPAKAGIC_00275	0.000281	-	-	-	-	-	-	-	-
DPAKAGIC_00276	9.27e-75	-	-	-	K	-	-	-	Cro/C1-type HTH DNA-binding domain
DPAKAGIC_00277	2.16e-39	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
DPAKAGIC_00278	0.0	yifK	-	-	E	ko:K03293	-	ko00000	Amino acid permease
DPAKAGIC_00279	1.21e-244	thyA	2.1.1.45	-	F	ko:K00560	ko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523	ko00000,ko00001,ko00002,ko01000	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
DPAKAGIC_00280	1.53e-122	folA	1.5.1.3	-	H	ko:K00287	ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523	ko00000,ko00001,ko00002,ko01000	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
DPAKAGIC_00281	0.0	aha1	-	-	P	ko:K12952	-	ko00000,ko01000	E1-E2 ATPase
DPAKAGIC_00282	1.03e-203	metQ	-	-	P	ko:K02073	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the nlpA lipoprotein family
DPAKAGIC_00283	2.07e-240	metN	-	-	P	ko:K02071	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
DPAKAGIC_00284	4.45e-127	metI	-	-	P	ko:K02072	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
DPAKAGIC_00285	0.0	fumC	4.2.1.2	-	C	ko:K01679	ko00020,ko00620,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko04934,ko05200,ko05211,map00020,map00620,map00720,map01100,map01110,map01120,map01130,map01200,map04934,map05200,map05211	ko00000,ko00001,ko00002,ko01000	Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
DPAKAGIC_00286	0.0	frdA	1.3.5.4	-	C	ko:K00244	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	ko00000,ko00001,ko00002,ko01000	FAD binding domain
DPAKAGIC_00287	0.0	-	-	-	M	-	-	-	domain protein
DPAKAGIC_00288	5.14e-216	ldh	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	Belongs to the LDH MDH superfamily. LDH family
DPAKAGIC_00289	0.0	pepC4	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	Peptidase C1-like family
DPAKAGIC_00290	0.0	citP	-	-	P	ko:K03319	-	ko00000	Sodium:sulfate symporter transmembrane region
DPAKAGIC_00291	7.54e-200	-	-	-	I	-	-	-	Alpha/beta hydrolase family
DPAKAGIC_00292	7.35e-249	citC	6.2.1.22	-	H	ko:K01910	ko02020,map02020	ko00000,ko00001,ko01000	Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
DPAKAGIC_00293	2.76e-60	citD	-	-	C	ko:K01646	ko02020,map02020	ko00000,ko00001	Covalent carrier of the coenzyme of citrate lyase
DPAKAGIC_00294	6.24e-215	citE	4.1.3.34	-	G	ko:K01644	ko02020,map02020	ko00000,ko00001,ko01000	Belongs to the HpcH HpaI aldolase family
DPAKAGIC_00295	0.0	citF	2.8.3.10	-	H	ko:K01643	ko02020,map02020	ko00000,ko00001,ko01000	Citrate (pro-3S)-lyase alpha chain
DPAKAGIC_00296	1.24e-93	ytwI	-	-	S	-	-	-	Protein of unknown function (DUF441)
DPAKAGIC_00297	6.03e-19	-	-	-	-	-	-	-	-
DPAKAGIC_00298	1.14e-192	cbiQ	-	-	P	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	cobalt transport
DPAKAGIC_00299	0.0	ykoD	-	-	P	ko:K16786,ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
DPAKAGIC_00300	4.42e-124	-	-	-	S	ko:K16924	-	ko00000,ko00002,ko02000	UPF0397 protein
DPAKAGIC_00301	2.09e-83	-	-	-	S	-	-	-	Domain of unknown function DUF1828
DPAKAGIC_00302	5.21e-71	-	-	-	-	-	-	-	-
DPAKAGIC_00303	1.56e-228	citR	-	-	K	-	-	-	Putative sugar-binding domain
DPAKAGIC_00304	3.82e-312	-	-	-	S	-	-	-	Putative threonine/serine exporter
DPAKAGIC_00305	7.54e-115	ybaK	-	-	S	ko:K03976	-	ko00000,ko01000,ko03016	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
DPAKAGIC_00306	1.32e-221	prmA	-	-	J	ko:K02687	-	ko00000,ko01000,ko03009	Ribosomal protein L11 methyltransferase
DPAKAGIC_00307	1.17e-65	-	-	-	-	-	-	-	-
DPAKAGIC_00308	0.0	relA	2.7.6.5	-	KT	ko:K00951	ko00230,map00230	ko00000,ko00001,ko01000	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
DPAKAGIC_00309	2.56e-99	dtd	-	-	J	ko:K07560	-	ko00000,ko01000,ko03016	rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
DPAKAGIC_00310	1.74e-311	hisS	6.1.1.21	-	J	ko:K01892	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	histidyl-tRNA synthetase
DPAKAGIC_00311	0.0	aspS	6.1.1.12	-	J	ko:K01876	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
DPAKAGIC_00312	9.94e-287	aspC	-	-	E	ko:K00841	ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase
DPAKAGIC_00313	1.03e-285	coaBC	4.1.1.36, 6.3.2.5	-	H	ko:K01598,ko:K13038	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
DPAKAGIC_00314	2.72e-197	-	-	-	S	-	-	-	reductase
DPAKAGIC_00315	3.29e-193	yxeH	-	-	S	-	-	-	hydrolase
DPAKAGIC_00316	2.31e-230	gyaR	1.1.1.26, 1.1.1.399, 1.1.1.95	-	CH	ko:K00015,ko:K00058	ko00260,ko00630,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00260,map00630,map00680,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
DPAKAGIC_00317	5.04e-298	yhdG	-	-	E	ko:K03294	-	ko00000	Amino Acid
DPAKAGIC_00318	4.52e-140	yngC	-	-	S	-	-	-	SNARE associated Golgi protein
DPAKAGIC_00319	0.0	uvrC	-	-	L	ko:K03703	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
DPAKAGIC_00320	3.01e-310	obg	-	-	S	ko:K03979	-	ko00000,ko01000,ko03009	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
DPAKAGIC_00321	0.0	oatA	-	-	I	-	-	-	Acyltransferase
DPAKAGIC_00322	6.35e-228	rnz	3.1.26.11	-	J	ko:K00784	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
DPAKAGIC_00323	1.5e-186	-	-	-	S	ko:K07124	-	ko00000	Belongs to the short-chain dehydrogenases reductases (SDR) family
DPAKAGIC_00324	2.25e-45	-	-	-	S	-	-	-	Lipopolysaccharide assembly protein A domain
DPAKAGIC_00325	3.62e-38	rpmF	-	-	J	ko:K02911	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Belongs to the bacterial ribosomal protein bL32 family
DPAKAGIC_00326	0.0	yfkN	3.1.3.6, 3.1.4.16	-	F	ko:K01119	ko00230,ko00240,map00230,map00240	ko00000,ko00001,ko01000	Belongs to the 5'-nucleotidase family
DPAKAGIC_00327	3.9e-33	-	-	-	S	-	-	-	Protein of unknown function (DUF2929)
DPAKAGIC_00328	0.0	dnaE	2.7.7.7	-	L	ko:K02337	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase
DPAKAGIC_00329	7.76e-233	pfkA	2.7.1.11	-	F	ko:K00850	ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04152,ko05230,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04152,map05230	ko00000,ko00001,ko00002,ko01000,ko01009,ko03019	Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
DPAKAGIC_00330	0.0	pyk	2.7.1.40	-	G	ko:K00873	ko00010,ko00230,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko04930,ko05165,ko05203,ko05230,map00010,map00230,map00620,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map04930,map05165,map05203,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Belongs to the pyruvate kinase family
DPAKAGIC_00331	1e-216	yitL	-	-	S	ko:K00243	-	ko00000	S1 domain
DPAKAGIC_00332	2.19e-218	xerD	-	-	D	ko:K04763	-	ko00000,ko03036	recombinase XerD
DPAKAGIC_00333	6.56e-81	ribT	-	-	K	ko:K02859	-	ko00000	COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
DPAKAGIC_00334	1.81e-169	scpA	-	-	D	ko:K05896	-	ko00000,ko03036	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
DPAKAGIC_00335	5.75e-135	scpB	-	-	D	ko:K06024	-	ko00000,ko03036	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
DPAKAGIC_00336	3.66e-165	rluB	5.4.99.22	-	J	ko:K06178	-	ko00000,ko01000,ko03009	Belongs to the pseudouridine synthase RsuA family
DPAKAGIC_00337	6.79e-152	ribU	-	-	U	-	-	-	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
DPAKAGIC_00338	7.33e-71	-	-	-	M	-	-	-	Lysin motif
DPAKAGIC_00339	1.28e-147	cmk	2.7.4.25	-	F	ko:K00945	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the cytidylate kinase family. Type 1 subfamily
DPAKAGIC_00340	4.07e-270	rpsA	-	-	J	ko:K02945	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein S1
DPAKAGIC_00341	3.15e-313	der	-	-	S	ko:K03977	-	ko00000,ko03009	GTPase that plays an essential role in the late steps of ribosome biogenesis
DPAKAGIC_00342	1.17e-56	hup	-	-	L	ko:K03530	-	ko00000,ko03032,ko03036,ko03400	Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
DPAKAGIC_00343	2.22e-296	XK27_05225	-	-	S	-	-	-	Tetratricopeptide repeat protein
DPAKAGIC_00344	1.3e-207	XK27_10395	-	-	S	-	-	-	Uncharacterised 5xTM membrane BCR, YitT family COG1284
DPAKAGIC_00345	8.15e-284	cca	2.7.7.72	-	J	ko:K00974	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
DPAKAGIC_00346	7.33e-143	hlyIII	-	-	S	ko:K11068	-	ko00000,ko02042	protein, hemolysin III
DPAKAGIC_00347	6.34e-193	degV3	-	-	S	-	-	-	Uncharacterised protein, DegV family COG1307
DPAKAGIC_00348	1.64e-47	yozE	-	-	S	-	-	-	Belongs to the UPF0346 family
DPAKAGIC_00349	0.0	nhaP4	-	-	P	ko:K03316	-	ko00000	Sodium proton antiporter
DPAKAGIC_00350	8.81e-205	rbgA	-	-	S	ko:K14540	-	ko00000,ko03009	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
DPAKAGIC_00351	8.96e-172	rnhB	3.1.26.4	-	L	ko:K03470	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
DPAKAGIC_00352	1.07e-201	dprA	-	-	LU	ko:K04096	-	ko00000	DNA protecting protein DprA
DPAKAGIC_00353	0.0	topA	5.99.1.2	-	L	ko:K03168	-	ko00000,ko01000,ko03032,ko03400	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
DPAKAGIC_00354	2.09e-315	trmFO	2.1.1.74	-	J	ko:K04094	-	ko00000,ko01000,ko03016,ko03036	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
DPAKAGIC_00355	2.27e-216	xerC	-	-	D	ko:K03733,ko:K04763	-	ko00000,ko03036	Phage integrase, N-terminal SAM-like domain
DPAKAGIC_00356	3.29e-116	hslV	3.4.25.2	-	O	ko:K01419	-	ko00000,ko01000,ko01002	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
DPAKAGIC_00357	4.61e-308	hslU	-	-	O	ko:K03667	-	ko00000,ko03110	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
DPAKAGIC_00358	7.16e-232	lacX	5.1.3.3	-	G	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Aldose 1-epimerase
DPAKAGIC_00359	1.72e-85	-	-	-	-	-	-	-	-
DPAKAGIC_00360	4.82e-296	celB	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
DPAKAGIC_00361	1.25e-204	-	-	-	S	-	-	-	Alpha/beta hydrolase of unknown function (DUF915)
DPAKAGIC_00362	2.82e-194	-	-	-	L	-	-	-	Phage integrase, N-terminal SAM-like domain
DPAKAGIC_00363	7.42e-89	crcB1	-	-	U	ko:K06199	-	ko00000,ko02000	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
DPAKAGIC_00364	9.18e-83	crcB	-	-	U	ko:K06199	-	ko00000,ko02000	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
DPAKAGIC_00365	0.0	pepV	3.5.1.18	-	E	ko:K01270,ko:K01274,ko:K01439	ko00300,ko00480,ko01100,ko01120,ko01230,map00300,map00480,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000,ko01002	dipeptidase PepV
DPAKAGIC_00366	0.0	-	-	-	E	-	-	-	Amino acid permease
DPAKAGIC_00367	0.0	speA	4.1.1.17, 4.1.1.18, 4.1.1.19	-	E	ko:K01581,ko:K01582,ko:K01585	ko00310,ko00330,ko00480,ko00960,ko01100,ko01110,ko01130,map00310,map00330,map00480,map00960,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Orn/Lys/Arg decarboxylase, C-terminal domain
DPAKAGIC_00368	1.13e-312	ynbB	-	-	P	-	-	-	aluminum resistance
DPAKAGIC_00369	6.35e-154	ktrA	-	-	P	ko:K03499	-	ko00000,ko02000	domain protein
DPAKAGIC_00370	7.3e-304	ktrB	-	-	P	ko:K03498	-	ko00000,ko02000	Potassium uptake protein
DPAKAGIC_00371	0.0	recQ	3.6.4.12	-	L	ko:K03654	ko03018,map03018	ko00000,ko00001,ko01000,ko03400	ATP-dependent DNA helicase RecQ
DPAKAGIC_00372	1.47e-105	-	-	-	C	-	-	-	Flavodoxin
DPAKAGIC_00373	0.0	uvrA2	-	-	L	ko:K03701	ko03420,map03420	ko00000,ko00001,ko03400	excinuclease ABC, A subunit
DPAKAGIC_00374	4.33e-234	mmuM	2.1.1.10	-	H	ko:K00547	ko00270,ko01100,ko01110,map00270,map01100,map01110	ko00000,ko00001,ko01000	homocysteine S-methyltransferase
DPAKAGIC_00375	8.43e-148	-	-	-	I	-	-	-	Acid phosphatase homologues
DPAKAGIC_00376	5.22e-89	yvbK	-	-	K	-	-	-	COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
DPAKAGIC_00377	1.71e-265	-	-	-	V	-	-	-	Beta-lactamase
DPAKAGIC_00378	2.42e-201	pdxK	2.7.1.35	-	H	ko:K00868	ko00750,ko01100,map00750,map01100	ko00000,ko00001,ko01000	Phosphomethylpyrimidine kinase
DPAKAGIC_00379	2.46e-121	-	-	-	S	-	-	-	ECF-type riboflavin transporter, S component
DPAKAGIC_00380	1.84e-281	-	-	-	S	-	-	-	Putative peptidoglycan binding domain
DPAKAGIC_00381	5.05e-313	-	-	-	-	-	-	-	-
DPAKAGIC_00382	0.0	treB	-	-	G	ko:K02755,ko:K02756,ko:K02757	ko02060,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
DPAKAGIC_00383	2.78e-166	treR	-	-	K	ko:K03486	-	ko00000,ko03000	UTRA
DPAKAGIC_00384	0.0	treC	3.2.1.93	GH13	G	ko:K01226	ko00500,map00500	ko00000,ko00001,ko01000	Alpha amylase, catalytic domain protein
DPAKAGIC_00385	5.68e-165	-	-	-	M	-	-	-	Glycosyl transferases group 1
DPAKAGIC_00386	5.84e-129	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
DPAKAGIC_00387	7.57e-211	-	-	-	M	-	-	-	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
DPAKAGIC_00388	2.61e-19	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
DPAKAGIC_00389	0.0	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
DPAKAGIC_00390	0.0	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
DPAKAGIC_00391	9.5e-39	-	-	-	K	-	-	-	bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding
DPAKAGIC_00392	1.72e-208	-	3.5.3.1	-	E	ko:K01476	ko00220,ko00330,ko01100,ko01110,ko01130,ko01230,ko05146,map00220,map00330,map01100,map01110,map01130,map01230,map05146	ko00000,ko00001,ko00002,ko01000	Arginase family
DPAKAGIC_00393	5.93e-149	-	-	-	GM	-	-	-	NAD dependent epimerase dehydratase family protein
DPAKAGIC_00394	5.96e-205	-	-	-	K	-	-	-	Transcriptional regulator
DPAKAGIC_00395	6.27e-215	-	1.1.1.346	-	S	ko:K06221	-	ko00000,ko01000	Oxidoreductase, aldo keto reductase family protein
DPAKAGIC_00396	1.08e-212	akr5f	1.1.1.346	-	S	ko:K06221	-	ko00000,ko01000	reductase
DPAKAGIC_00397	1.31e-211	yvgN	-	-	C	-	-	-	Aldo keto reductase
DPAKAGIC_00398	5.42e-275	-	-	-	S	-	-	-	SLAP domain
DPAKAGIC_00399	1.7e-133	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
DPAKAGIC_00402	2.77e-134	-	-	-	-	-	-	-	-
DPAKAGIC_00403	2.07e-102	-	-	-	K	-	-	-	Transcriptional regulator
DPAKAGIC_00404	8.07e-313	brnQ	-	-	U	ko:K03311	-	ko00000	Component of the transport system for branched-chain amino acids
DPAKAGIC_00405	3.34e-211	-	-	-	S	-	-	-	reductase
DPAKAGIC_00406	2.77e-220	-	-	-	-	-	-	-	-
DPAKAGIC_00407	4.2e-42	lysR	-	-	K	-	-	-	Transcriptional regulator
DPAKAGIC_00408	3.25e-145	glnP9	-	-	P	ko:K02029	-	ko00000,ko00002,ko02000	ABC transporter, permease protein
DPAKAGIC_00409	2.48e-131	glnP7	-	-	P	ko:K02029	-	ko00000,ko00002,ko02000	ABC transporter permease
DPAKAGIC_00410	6.13e-177	glnQ	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
DPAKAGIC_00411	3.59e-205	cjaA	-	-	ET	ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter substrate-binding protein
DPAKAGIC_00412	2.66e-117	tpx	1.11.1.15	-	O	ko:K11065	-	ko00000,ko01000	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
DPAKAGIC_00413	1.72e-142	-	-	-	G	-	-	-	Phosphoglycerate mutase family
DPAKAGIC_00414	1.81e-223	-	-	-	S	ko:K07045	-	ko00000	Amidohydrolase
DPAKAGIC_00415	5.1e-43	-	-	-	-	-	-	-	-
DPAKAGIC_00416	1.41e-141	-	-	-	-	-	-	-	-
DPAKAGIC_00417	3.18e-140	-	-	-	-	-	-	-	-
DPAKAGIC_00418	3.18e-167	-	-	-	F	-	-	-	glutamine amidotransferase
DPAKAGIC_00419	9.73e-275	-	-	-	EGP	-	-	-	Major Facilitator Superfamily
DPAKAGIC_00420	1.7e-199	-	-	-	K	-	-	-	Bacterial regulatory helix-turn-helix protein, lysR family
DPAKAGIC_00421	2.53e-152	yjhB	3.6.1.13	-	F	ko:K01515	ko00230,map00230	ko00000,ko00001,ko01000	NUDIX domain
DPAKAGIC_00422	2.43e-100	-	-	-	-	-	-	-	-
DPAKAGIC_00423	1.24e-113	-	-	-	FG	-	-	-	HIT domain
DPAKAGIC_00424	5.21e-82	-	-	-	-	-	-	-	-
DPAKAGIC_00425	4.91e-121	rimL	-	-	J	ko:K03817	-	ko00000,ko01000,ko03009	Acetyltransferase (GNAT) domain
DPAKAGIC_00426	1.62e-135	-	-	-	S	-	-	-	Alpha/beta hydrolase family
DPAKAGIC_00427	6.2e-131	-	-	-	-	-	-	-	-
DPAKAGIC_00428	1.22e-103	-	-	-	-	-	-	-	-
DPAKAGIC_00429	2.72e-188	-	-	-	F	-	-	-	Phosphorylase superfamily
DPAKAGIC_00430	3.34e-139	-	5.4.2.11	-	G	ko:K01834	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Phosphoglycerate mutase family
DPAKAGIC_00431	2.07e-189	-	-	-	F	-	-	-	Phosphorylase superfamily
DPAKAGIC_00432	1.06e-185	-	-	-	F	-	-	-	Phosphorylase superfamily
DPAKAGIC_00433	1.79e-144	-	-	-	S	ko:K07025	-	ko00000	Haloacid dehalogenase-like hydrolase
DPAKAGIC_00434	1.24e-47	-	-	-	-	-	-	-	-
DPAKAGIC_00435	2.58e-67	mleP2	-	-	S	ko:K07088	-	ko00000	Sodium Bile acid symporter family
DPAKAGIC_00436	9.6e-137	-	-	-	-	-	-	-	-
DPAKAGIC_00437	8.78e-52	-	-	-	-	-	-	-	-
DPAKAGIC_00438	3.77e-216	mleR	-	-	K	-	-	-	LysR family
DPAKAGIC_00439	0.0	mleS	1.1.1.38, 4.1.1.101	-	C	ko:K00027,ko:K22212	ko00620,ko01120,ko01200,ko02020,map00620,map01120,map01200,map02020	ko00000,ko00001,ko01000	Malic enzyme
DPAKAGIC_00440	3.74e-130	ltrA	-	-	S	-	-	-	Bacterial low temperature requirement A protein (LtrA)
DPAKAGIC_00441	2.2e-310	-	-	-	L	ko:K07478	-	ko00000	AAA C-terminal domain
DPAKAGIC_00442	2.27e-248	cbh	3.5.1.24	-	M	ko:K01442	ko00120,ko00121,ko01100,map00120,map00121,map01100	ko00000,ko00001,ko01000	Linear amide C-N hydrolase, choloylglycine hydrolase family protein
DPAKAGIC_00443	5.33e-147	-	-	-	S	-	-	-	L,D-transpeptidase catalytic domain
DPAKAGIC_00444	1.23e-278	metE	2.1.1.14	-	E	ko:K00549	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	methionine synthase, vitamin-B12 independent
DPAKAGIC_00445	3.03e-115	luxS	4.4.1.21	-	H	ko:K07173	ko00270,ko01100,ko01230,ko02024,ko02026,ko05111,map00270,map01100,map01230,map02024,map02026,map05111	ko00000,ko00001,ko00002,ko01000	Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
DPAKAGIC_00446	2.55e-118	-	-	-	L	-	-	-	nuclease
DPAKAGIC_00447	2.51e-198	-	-	-	F	ko:K15051	-	ko00000	DNA/RNA non-specific endonuclease
DPAKAGIC_00448	2.81e-148	-	-	-	S	ko:K07118	-	ko00000	NAD(P)H-binding
DPAKAGIC_00449	5.39e-308	steT	-	-	E	ko:K03294	-	ko00000	amino acid
DPAKAGIC_00450	4.4e-138	mccA	2.5.1.134, 2.5.1.47	-	E	ko:K01738,ko:K17216	ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the cysteine synthase cystathionine beta- synthase family
DPAKAGIC_00451	6.01e-54	mccB	4.4.1.1, 4.4.1.2, 4.4.1.8	-	E	ko:K01760,ko:K17217	ko00260,ko00270,ko00450,ko00920,ko01100,ko01110,ko01130,ko01230,map00260,map00270,map00450,map00920,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	cystathionine
DPAKAGIC_00452	3.16e-190	mccB	4.4.1.1, 4.4.1.2, 4.4.1.8	-	E	ko:K01760,ko:K17217	ko00260,ko00270,ko00450,ko00920,ko01100,ko01110,ko01130,ko01230,map00260,map00270,map00450,map00920,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	cystathionine
DPAKAGIC_00453	0.0	ppc	4.1.1.31	-	C	ko:K01595	ko00620,ko00680,ko00710,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00710,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	phosphoenolpyruvate carboxylase activity
DPAKAGIC_00454	0.0	-	-	-	-	-	-	-	-
DPAKAGIC_00455	0.0	-	-	-	-	-	-	-	-
DPAKAGIC_00456	2.29e-224	yobV3	-	-	K	-	-	-	WYL domain
DPAKAGIC_00457	4.35e-108	-	-	-	S	-	-	-	Pyridoxamine 5'-phosphate oxidase
DPAKAGIC_00458	1.57e-187	gdh	1.1.1.47	-	IQ	ko:K00034	ko00030,ko01120,ko01200,map00030,map01120,map01200	ko00000,ko00001,ko01000	reductase
DPAKAGIC_00459	3.78e-72	ywnH	2.3.1.183	-	M	ko:K03823	ko00440,ko01130,map00440,map01130	ko00000,ko00001,ko01000	Acetyltransferase (GNAT) domain
DPAKAGIC_00460	1.16e-148	-	-	-	C	-	-	-	Aldo/keto reductase family
DPAKAGIC_00461	7.12e-80	-	-	-	C	-	-	-	aldo keto reductase
DPAKAGIC_00462	1.54e-187	-	-	-	U	ko:K05340	-	ko00000,ko02000	ribose uptake protein RbsU
DPAKAGIC_00463	1.51e-24	-	-	-	C	-	-	-	Flavodoxin
DPAKAGIC_00465	9.87e-139	-	-	-	C	-	-	-	Flavodoxin
DPAKAGIC_00466	2.88e-130	-	-	-	P	-	-	-	esterase
DPAKAGIC_00467	0.0	gshR3	1.8.1.7	-	C	ko:K00383	ko00480,ko04918,map00480,map04918	ko00000,ko00001,ko01000	Glutathione reductase
DPAKAGIC_00468	3.77e-32	-	-	-	-	-	-	-	-
DPAKAGIC_00469	1.29e-182	-	-	-	C	-	-	-	Flavodoxin
DPAKAGIC_00470	7.38e-127	-	-	-	S	ko:K07038	-	ko00000	LexA-binding, inner membrane-associated putative hydrolase
DPAKAGIC_00471	3.1e-30	-	-	-	C	-	-	-	Flavodoxin
DPAKAGIC_00472	1.39e-190	-	-	-	P	-	-	-	FAD-binding domain
DPAKAGIC_00473	2.54e-101	adh2	1.1.1.1	-	E	ko:K00001	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	alcohol dehydrogenase
DPAKAGIC_00475	0.0	yagE	-	-	E	-	-	-	amino acid
DPAKAGIC_00476	1.37e-15	-	-	-	S	-	-	-	Alpha beta hydrolase
DPAKAGIC_00477	6e-59	proC	1.5.1.2	-	E	ko:K00286	ko00330,ko01100,ko01110,ko01130,ko01230,map00330,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
DPAKAGIC_00478	4.13e-18	proC	1.5.1.2	-	E	ko:K00286	ko00330,ko01100,ko01110,ko01130,ko01230,map00330,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
DPAKAGIC_00479	1.43e-24	nth2	-	-	L	ko:K07457	-	ko00000	Base excision DNA repair protein, HhH-GPD family
DPAKAGIC_00480	8.53e-215	-	-	-	S	-	-	-	Conserved hypothetical protein 698
DPAKAGIC_00481	1.17e-130	-	-	-	-	-	-	-	-
DPAKAGIC_00482	1.9e-140	plsY	2.3.1.15	-	I	ko:K08591	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
DPAKAGIC_00483	0.0	parE	-	-	L	ko:K02622	-	ko00000,ko01000,ko02048,ko03032,ko03036	Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
DPAKAGIC_00484	0.0	parC	-	-	L	ko:K02621	-	ko00000,ko01000,ko02048,ko03032,ko03036	Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
DPAKAGIC_00485	3.72e-237	-	-	-	K	-	-	-	Transcriptional regulator
DPAKAGIC_00486	3.65e-222	ppaC	3.6.1.1	-	C	ko:K15986	ko00190,map00190	ko00000,ko00001,ko01000	inorganic pyrophosphatase
DPAKAGIC_00487	7.02e-146	ppiB	5.2.1.8	-	G	ko:K03768	-	ko00000,ko01000,ko03110	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
DPAKAGIC_00488	9.73e-55	-	-	-	K	-	-	-	Helix-turn-helix domain
DPAKAGIC_00489	4.78e-165	-	-	-	S	-	-	-	Protein of unknown function (DUF1275)
DPAKAGIC_00490	3.46e-87	fic	-	-	D	ko:K04095	-	ko00000,ko03036	Fic/DOC family
DPAKAGIC_00492	0.0	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
DPAKAGIC_00493	0.0	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
DPAKAGIC_00494	1.74e-272	-	-	-	EGP	-	-	-	Transmembrane secretion effector
DPAKAGIC_00495	1.06e-110	rmaD	-	-	K	-	-	-	transcriptional
DPAKAGIC_00496	3.92e-76	azoR	-	-	C	ko:K01118	-	ko00000,ko01000	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
DPAKAGIC_00497	3.43e-07	azoR	-	-	C	ko:K01118	-	ko00000,ko01000	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
DPAKAGIC_00498	2.71e-256	-	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
DPAKAGIC_00499	2.62e-138	XK27_00160	-	-	S	-	-	-	Domain of unknown function (DUF5052)
DPAKAGIC_00500	1.27e-119	flaR	-	-	F	-	-	-	topology modulation protein
DPAKAGIC_00501	1.03e-100	-	-	-	-	-	-	-	-
DPAKAGIC_00502	5.95e-250	xerS	-	-	L	ko:K03733	-	ko00000,ko03036	Belongs to the 'phage' integrase family
DPAKAGIC_00503	1.25e-204	-	-	-	S	-	-	-	EDD domain protein, DegV family
DPAKAGIC_00504	2.95e-87	-	-	-	-	-	-	-	-
DPAKAGIC_00505	0.0	FbpA	-	-	K	-	-	-	Fibronectin-binding protein
DPAKAGIC_00506	0.0	carB1	6.3.5.5	-	F	ko:K01955	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthase
DPAKAGIC_00507	2.05e-255	carA	6.3.5.5	-	F	ko:K01956	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthetase glutamine chain
DPAKAGIC_00508	2.88e-219	rluD	5.4.99.23	-	J	ko:K06180	-	ko00000,ko01000,ko03009	Responsible for synthesis of pseudouridine from uracil
DPAKAGIC_00509	6.03e-103	lspA	3.4.23.36	-	MU	ko:K03101	ko03060,map03060	ko00000,ko00001,ko01000,ko01002	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
DPAKAGIC_00510	0.0	fhs	6.3.4.3	-	F	ko:K01938	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Belongs to the formate--tetrahydrofolate ligase family
DPAKAGIC_00511	2.01e-310	cpdA	-	-	S	-	-	-	Calcineurin-like phosphoesterase
DPAKAGIC_00512	2.39e-277	ypsC	-	-	L	ko:K07444	-	ko00000,ko01000	Belongs to the methyltransferase superfamily
DPAKAGIC_00513	2.83e-90	gpsB	-	-	D	-	-	-	Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
DPAKAGIC_00514	1.61e-136	ypsA	-	-	S	-	-	-	Belongs to the UPF0398 family
DPAKAGIC_00515	1.99e-151	recU	-	-	L	ko:K03700	-	ko00000,ko03400	Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
DPAKAGIC_00516	0.0	ponA	2.4.1.129, 3.4.16.4	GT51	M	ko:K05366	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01003,ko01011	penicillin-binding protein 1A
DPAKAGIC_00517	4.71e-149	nth	4.2.99.18	-	L	ko:K10773	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
DPAKAGIC_00518	1.39e-148	dnaD	-	-	L	ko:K02086	-	ko00000	DnaD domain protein
DPAKAGIC_00519	0.0	asnS	6.1.1.22	-	J	ko:K01893	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Asparaginyl-tRNA synthetase
DPAKAGIC_00520	8.23e-117	ypmB	-	-	S	-	-	-	Protein conserved in bacteria
DPAKAGIC_00521	0.0	dinG	3.6.4.12	-	L	ko:K03722	-	ko00000,ko01000,ko03400	helicase involved in DNA repair and perhaps also replication
DPAKAGIC_00522	0.0	addA	3.6.4.12	-	L	ko:K16898	-	ko00000,ko01000,ko03400	ATP-dependent helicase nuclease subunit A
DPAKAGIC_00523	0.0	rexB	3.6.4.12	-	L	ko:K16899	-	ko00000,ko01000,ko03400	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
DPAKAGIC_00524	6.78e-218	mvk	2.7.1.36	-	I	ko:K00869	ko00900,ko01100,ko01110,ko01130,ko04146,map00900,map01100,map01110,map01130,map04146	ko00000,ko00001,ko00002,ko01000	GHMP kinases N terminal domain
DPAKAGIC_00525	3.39e-227	mvaD	4.1.1.33	-	I	ko:K01597	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	diphosphomevalonate decarboxylase
DPAKAGIC_00526	1.64e-261	mvaK2	2.7.4.2	-	I	ko:K00938	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	phosphomevalonate kinase
DPAKAGIC_00527	2.09e-242	fni	5.3.3.2	-	C	ko:K01823	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
DPAKAGIC_00528	1.01e-187	-	-	-	K	-	-	-	SIS domain
DPAKAGIC_00529	1.18e-140	XK27_10475	-	-	S	-	-	-	Oxidoreductase family, NAD-binding Rossmann fold
DPAKAGIC_00530	2.04e-73	XK27_10475	-	-	S	-	-	-	Oxidoreductase family, NAD-binding Rossmann fold
DPAKAGIC_00531	1.14e-275	iscS	2.8.1.7	-	E	ko:K04487	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko02048,ko03016,ko03029	Aminotransferase class V
DPAKAGIC_00532	0.0	rsmF	-	-	J	-	-	-	NOL1 NOP2 sun family protein
DPAKAGIC_00533	1.05e-228	-	-	-	-	-	-	-	-
DPAKAGIC_00534	1.57e-181	-	-	-	-	-	-	-	-
DPAKAGIC_00535	1.72e-123	lepB	3.4.21.89	-	U	ko:K03100	ko02024,ko03060,map02024,map03060	ko00000,ko00001,ko01000,ko01002	Belongs to the peptidase S26 family
DPAKAGIC_00536	1.04e-37	-	-	-	-	-	-	-	-
DPAKAGIC_00537	3.64e-175	-	-	-	-	-	-	-	-
DPAKAGIC_00538	2.03e-186	-	-	-	-	-	-	-	-
DPAKAGIC_00539	1.51e-174	-	-	-	-	-	-	-	-
DPAKAGIC_00540	1.09e-160	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
DPAKAGIC_00541	1.25e-80	lexA	-	-	K	ko:K07979	-	ko00000,ko03000	Transcriptional regulator, GntR family
DPAKAGIC_00542	7.64e-313	pepT	3.4.11.4	-	E	ko:K01258	-	ko00000,ko01000,ko01002	Cleaves the N-terminal amino acid of tripeptides
DPAKAGIC_00543	3.45e-197	yqfO	-	-	S	-	-	-	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
DPAKAGIC_00544	4.48e-161	trmK	2.1.1.217	-	S	ko:K06967	-	ko00000,ko01000,ko03016	SAM-dependent methyltransferase
DPAKAGIC_00545	1.87e-106	-	3.6.1.55	-	F	ko:K03574	-	ko00000,ko01000,ko03400	NUDIX domain
DPAKAGIC_00546	2.24e-162	-	-	-	S	-	-	-	Peptidase family M23
DPAKAGIC_00547	3.01e-253	sigA	-	-	K	ko:K03086	-	ko00000,ko03021	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
DPAKAGIC_00548	0.0	dnaG	-	-	L	ko:K02316	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
DPAKAGIC_00549	0.0	glyS	6.1.1.14	-	J	ko:K01879	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Glycyl-tRNA synthetase beta subunit
DPAKAGIC_00550	1.05e-227	glyQ	6.1.1.14	-	J	ko:K01878	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	glycyl-tRNA synthetase alpha subunit
DPAKAGIC_00551	5.41e-173	recO	-	-	L	ko:K03584	ko03440,map03440	ko00000,ko00001,ko03400	Involved in DNA repair and RecF pathway recombination
DPAKAGIC_00552	6.28e-218	era	-	-	S	ko:K03595	-	ko00000,ko03009,ko03029	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
DPAKAGIC_00553	3.58e-129	ybeY	-	-	S	ko:K07042	-	ko00000,ko03009	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
DPAKAGIC_00554	1.82e-226	phoH	-	-	T	ko:K06217	-	ko00000	phosphate starvation-inducible protein PhoH
DPAKAGIC_00555	4.38e-92	yqeY	-	-	S	ko:K09117	-	ko00000	YqeY-like protein
DPAKAGIC_00556	4.83e-30	rpsU	-	-	J	ko:K02970	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bS21 family
DPAKAGIC_00557	4.68e-197	yqfL	2.7.11.33, 2.7.4.28	-	F	ko:K09773	-	ko00000,ko01000	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
DPAKAGIC_00558	3.22e-133	-	-	-	S	-	-	-	Peptidase family M23
DPAKAGIC_00559	6.31e-144	msrA	1.8.4.11, 1.8.4.12	-	O	ko:K07304,ko:K12267	-	ko00000,ko01000	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
DPAKAGIC_00560	2.17e-209	yitT	-	-	S	-	-	-	Uncharacterised 5xTM membrane BCR, YitT family COG1284
DPAKAGIC_00561	1.4e-157	-	-	-	-	-	-	-	-
DPAKAGIC_00562	4.04e-207	thrB	2.7.1.39	-	F	ko:K00872	ko00260,ko01100,ko01110,ko01120,ko01230,map00260,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
DPAKAGIC_00563	1.58e-282	hom	1.1.1.3	-	E	ko:K00003	ko00260,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00270,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	homoserine dehydrogenase
DPAKAGIC_00564	0.0	thrC	4.2.3.1	-	E	ko:K01733	ko00260,ko00750,ko01100,ko01110,ko01120,ko01230,map00260,map00750,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Threonine synthase
DPAKAGIC_00565	0.0	lysC	2.7.2.4	-	E	ko:K00928	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the aspartokinase family
DPAKAGIC_00566	0.0	oppA	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding proteins, family 5 Middle
DPAKAGIC_00567	3.65e-28	-	-	-	S	-	-	-	Bacterial protein of unknown function (DUF898)
DPAKAGIC_00568	1.92e-141	maa3	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	transferase hexapeptide repeat
DPAKAGIC_00569	0.0	-	-	-	-	ko:K14201	ko05150,map05150	ko00000,ko00001	-
DPAKAGIC_00570	2.86e-05	-	-	-	M	-	-	-	Leucine-rich repeat (LRR) protein
DPAKAGIC_00571	0.0	-	1.8.1.7	-	C	ko:K00383,ko:K21739	ko00480,ko04918,map00480,map04918	ko00000,ko00001,ko01000	Pyridine nucleotide-disulfide oxidoreductase
DPAKAGIC_00572	5.4e-282	brnQ	-	-	U	ko:K03311	-	ko00000	Component of the transport system for branched-chain amino acids
DPAKAGIC_00573	0.0	-	-	-	-	-	-	-	-
DPAKAGIC_00574	3.69e-157	-	-	-	G	-	-	-	Antibiotic biosynthesis monooxygenase
DPAKAGIC_00575	8.29e-129	-	-	-	-	-	-	-	-
DPAKAGIC_00576	1.82e-139	-	-	-	K	-	-	-	LysR substrate binding domain
DPAKAGIC_00577	8.62e-22	-	-	-	-	-	-	-	-
DPAKAGIC_00578	3.35e-291	-	-	-	S	-	-	-	Sterol carrier protein domain
DPAKAGIC_00579	3.83e-127	citX	2.7.7.61	-	HI	ko:K05964	ko02020,map02020	ko00000,ko00001,ko01000	Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase
DPAKAGIC_00580	3.72e-201	lysR5	-	-	K	-	-	-	LysR substrate binding domain
DPAKAGIC_00581	0.0	-	-	-	P	-	-	-	Cation transporter/ATPase, N-terminus
DPAKAGIC_00582	1.19e-113	-	3.4.21.96	-	S	ko:K01361	-	ko00000,ko01000,ko01002,ko03110	SLAP domain
DPAKAGIC_00583	0.0	cls	-	-	I	ko:K06131	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
DPAKAGIC_00584	4.53e-196	metA	2.3.1.46	-	E	ko:K00651	ko00270,ko00920,ko01100,ko01110,ko01230,map00270,map00920,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Transfers an acetyl group from acetyl-CoA to
DPAKAGIC_00585	1.73e-219	cysK	2.5.1.47	-	E	ko:K01738	ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the cysteine synthase cystathionine beta- synthase family
DPAKAGIC_00586	1.72e-269	-	-	-	S	ko:K09963	-	ko00000	Bacterial protein of unknown function (DUF871)
DPAKAGIC_00587	6.15e-194	citG	2.4.2.52	-	H	ko:K05966	ko02020,map02020	ko00000,ko00001,ko01000	2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase
DPAKAGIC_00589	7.02e-103	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
DPAKAGIC_00590	2.41e-123	apt	2.4.2.7	-	F	ko:K00759	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000,ko04147	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
DPAKAGIC_00591	0.0	recJ	-	-	L	ko:K07462	ko03410,ko03430,ko03440,map03410,map03430,map03440	ko00000,ko00001,ko01000,ko03400	Single-stranded-DNA-specific exonuclease RecJ
DPAKAGIC_00592	6.07e-155	srtA	3.4.22.70	-	M	ko:K07284	-	ko00000,ko01000,ko01002,ko01011	sortase family
DPAKAGIC_00593	0.0	lepA	-	-	M	ko:K03596	ko05134,map05134	ko00000,ko00001	Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
DPAKAGIC_00594	5.85e-274	dnaJ	-	-	O	ko:K03686	-	ko00000,ko03029,ko03110	ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
DPAKAGIC_00595	0.0	dnaK	-	-	O	ko:K04043	ko03018,ko04212,ko05152,map03018,map04212,map05152	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	Heat shock 70 kDa protein
DPAKAGIC_00596	7.55e-109	grpE	-	-	O	ko:K03687	-	ko00000,ko03029,ko03110	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
DPAKAGIC_00597	2.1e-247	hrcA	-	-	K	ko:K03705	-	ko00000,ko03000	Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
DPAKAGIC_00598	0.0	yjcA	-	-	S	ko:K19350	ko02010,map02010	ko00000,ko00001,ko01504,ko02000	ABC transporter
DPAKAGIC_00599	2.49e-228	ribF	2.7.1.26, 2.7.7.2	-	H	ko:K11753	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Belongs to the ribF family
DPAKAGIC_00600	8.54e-214	truB	5.4.99.25	-	J	ko:K03177,ko:K03483	-	ko00000,ko01000,ko03000,ko03016	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
DPAKAGIC_00601	9.65e-79	rbfA	-	-	J	ko:K02834	-	ko00000,ko03009	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
DPAKAGIC_00602	0.0	infB	-	-	J	ko:K02519	-	ko00000,ko03012,ko03029	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
DPAKAGIC_00603	3.95e-65	ylxQ	-	-	J	-	-	-	ribosomal protein
DPAKAGIC_00604	6.47e-64	ylxR	-	-	K	ko:K07742	-	ko00000	Protein of unknown function (DUF448)
DPAKAGIC_00605	3.76e-268	nusA	-	-	K	ko:K02600	-	ko00000,ko03009,ko03021	Participates in both transcription termination and antitermination
DPAKAGIC_00606	2.39e-108	rimP	-	-	J	ko:K09748	-	ko00000,ko03009	Required for maturation of 30S ribosomal subunits
DPAKAGIC_00607	0.0	polC	2.7.7.7	-	L	ko:K03763	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
DPAKAGIC_00608	0.0	proS	6.1.1.15	-	J	ko:K01881	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
DPAKAGIC_00609	1.35e-255	rseP	-	-	M	ko:K11749	ko02024,ko04112,map02024,map04112	ko00000,ko00001,ko01000,ko01002	zinc metalloprotease
DPAKAGIC_00610	1.89e-188	cdsA	2.7.7.41	-	I	ko:K00981	ko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070	ko00000,ko00001,ko00002,ko01000	Belongs to the CDS family
DPAKAGIC_00611	2.23e-178	uppS	2.5.1.31	-	H	ko:K00806	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
DPAKAGIC_00612	2.53e-114	frr	-	-	J	ko:K02838	-	ko00000,ko03012	Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
DPAKAGIC_00613	7.13e-169	pyrH	2.7.4.22	-	F	ko:K09903	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphorylation of UMP to UDP
DPAKAGIC_00614	1.45e-234	tsf	-	-	J	ko:K02357	-	ko00000,ko03012,ko03029	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
DPAKAGIC_00615	2.05e-181	rpsB	-	-	J	ko:K02967	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uS2 family
DPAKAGIC_00616	6.34e-255	yabB	2.1.1.223	-	L	ko:K07461,ko:K15460	-	ko00000,ko01000,ko03016	Methyltransferase small domain
DPAKAGIC_00617	1.59e-149	plsC	2.3.1.51	-	I	ko:K00655	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Acyltransferase
DPAKAGIC_00618	9.32e-296	cfa	2.1.1.79	-	M	ko:K00574	-	ko00000,ko01000	cyclopropane-fatty-acyl-phospholipid synthase
DPAKAGIC_00619	0.0	pepO	-	-	O	ko:K07386	-	ko00000,ko01000,ko01002	Peptidase family M13
DPAKAGIC_00620	0.0	mdlB	-	-	V	ko:K06147,ko:K18890	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
DPAKAGIC_00621	0.0	mdlA	-	-	V	ko:K06148,ko:K18889	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
DPAKAGIC_00622	3.18e-41	XK26_06720	-	-	S	ko:K09976	-	ko00000	Uncharacterised protein family (UPF0154)
DPAKAGIC_00623	2.97e-50	ynzC	-	-	S	-	-	-	UPF0291 protein
DPAKAGIC_00624	2.83e-145	lexA	3.4.21.88	-	K	ko:K01356	-	ko00000,ko00002,ko01000,ko01002,ko03400	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
DPAKAGIC_00625	1.4e-185	-	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase family
DPAKAGIC_00626	1.19e-156	ung2	3.2.2.27	-	L	ko:K21929	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Uracil-DNA glycosylase
DPAKAGIC_00627	2.58e-226	yfdH	-	GT2	M	ko:K12999	-	ko00000,ko01000,ko01003,ko01005	Glycosyltransferase, group 2 family protein
DPAKAGIC_00628	0.0	-	-	-	S	-	-	-	Bacterial membrane protein, YfhO
DPAKAGIC_00629	3.52e-91	-	-	-	S	-	-	-	GtrA-like protein
DPAKAGIC_00630	2.28e-74	rplS	-	-	J	ko:K02884	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
DPAKAGIC_00631	5.01e-164	trmD	2.1.1.228	-	J	ko:K00554	-	ko00000,ko01000,ko03016	Belongs to the RNA methyltransferase TrmD family
DPAKAGIC_00632	1.07e-124	rimM	-	-	J	ko:K02860	-	ko00000,ko03009	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
DPAKAGIC_00633	6.78e-60	rpsP	-	-	J	ko:K02959	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Belongs to the bacterial ribosomal protein bS16 family
DPAKAGIC_00634	1.9e-289	ffh	3.6.5.4	-	U	ko:K03106	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko01000,ko02044	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
DPAKAGIC_00635	3.35e-73	ylxM	-	-	S	ko:K09787	-	ko00000	Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
DPAKAGIC_00636	0.0	ctrA	-	-	E	ko:K03294	-	ko00000	amino acid
DPAKAGIC_00637	1.16e-88	-	-	-	-	-	-	-	-
DPAKAGIC_00638	0.0	pepD2	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
DPAKAGIC_00639	1.12e-228	ftsY	-	-	U	ko:K03110	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
DPAKAGIC_00640	0.0	smc	-	-	D	ko:K03529	-	ko00000,ko03036	Required for chromosome condensation and partitioning
DPAKAGIC_00641	4.48e-161	rnc	3.1.26.3	-	J	ko:K03685	ko03008,ko05205,map03008,map05205	ko00000,ko00001,ko01000,ko03009,ko03019,ko03036	Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
DPAKAGIC_00642	9.9e-240	purR13	-	-	K	ko:K02529	-	ko00000,ko03000	Bacterial regulatory proteins, lacI family
DPAKAGIC_00643	5.73e-202	-	2.2.1.1	-	G	ko:K00615	ko00030,ko00710,ko01051,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01051,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Transketolase, thiamine diphosphate binding domain
DPAKAGIC_00644	2.68e-225	-	2.2.1.1	-	G	ko:K00615	ko00030,ko00710,ko01051,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01051,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Transketolase, pyrimidine binding domain
DPAKAGIC_00645	0.0	glpK3	2.7.1.30	-	G	ko:K00864	ko00561,ko01100,ko03320,ko04626,map00561,map01100,map03320,map04626	ko00000,ko00001,ko01000,ko04147	FGGY family of carbohydrate kinases, C-terminal domain
DPAKAGIC_00646	1.12e-287	ackA	2.7.2.1	-	F	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
DPAKAGIC_00647	8.07e-315	lmrB	-	-	U	ko:K18926	-	ko00000,ko00002,ko02000	Belongs to the major facilitator superfamily
DPAKAGIC_00650	2.37e-210	-	-	-	-	-	-	-	-
DPAKAGIC_00651	5.77e-214	-	-	-	-	-	-	-	-
DPAKAGIC_00652	7.72e-152	ybbL	-	-	S	ko:K02068	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
DPAKAGIC_00653	7.05e-171	ybbM	-	-	S	ko:K02069	-	ko00000,ko00002,ko02000	Uncharacterised protein family (UPF0014)
DPAKAGIC_00654	0.0	glnA	6.3.1.2	-	E	ko:K01915	ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727	ko00000,ko00001,ko01000,ko04147	glutamine synthetase
DPAKAGIC_00655	4.04e-304	ynbB	-	-	P	-	-	-	aluminum resistance
DPAKAGIC_00656	8.27e-221	miaA	2.5.1.75	-	F	ko:K00791	ko00908,ko01100,ko01110,map00908,map01100,map01110	ko00000,ko00001,ko01000,ko01006,ko03016	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
DPAKAGIC_00657	1.48e-90	yqhL	-	-	P	-	-	-	Rhodanese-like protein
DPAKAGIC_00658	4.01e-44	yqgQ	-	-	S	-	-	-	Bacterial protein of unknown function (DUF910)
DPAKAGIC_00659	4.62e-153	gluP	3.4.21.105	-	S	ko:K19225	-	ko00000,ko01000,ko01002	Rhomboid family
DPAKAGIC_00660	3.23e-127	fthC	6.3.3.2	-	H	ko:K01934	ko00670,ko01100,map00670,map01100	ko00000,ko00001,ko01000	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
DPAKAGIC_00661	6.25e-29	rpmG	-	-	J	ko:K02913	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL33 family
DPAKAGIC_00662	0.0	pbp2b	-	-	M	ko:K00687,ko:K12553,ko:K21465,ko:K21466	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01011	Penicillin-binding Protein
DPAKAGIC_00663	0.0	-	-	-	S	-	-	-	membrane
DPAKAGIC_00664	2.46e-218	-	-	-	G	-	-	-	BadF/BadG/BcrA/BcrD ATPase family
DPAKAGIC_00665	0.0	prtB	3.4.21.96	-	O	ko:K01361	-	ko00000,ko01000,ko01002,ko03110	Belongs to the peptidase S8 family
DPAKAGIC_00666	1.06e-69	ltrA	-	-	S	-	-	-	Bacterial low temperature requirement A protein (LtrA)
DPAKAGIC_00667	3.51e-17	ltrA	-	-	S	-	-	-	Bacterial low temperature requirement A protein (LtrA)
DPAKAGIC_00668	0.0	yqjE	3.4.11.14, 3.4.11.4	-	E	ko:K01258,ko:K01263	-	ko00000,ko01000,ko01002	Cleaves the N-terminal amino acid of tripeptides
DPAKAGIC_00669	1.6e-217	ldh3	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	lactate/malate dehydrogenase, alpha/beta C-terminal domain
DPAKAGIC_00670	3.63e-94	greA	-	-	K	ko:K03624	-	ko00000,ko03021	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
DPAKAGIC_00671	0.0	pheT	6.1.1.20	-	J	ko:K01890	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
DPAKAGIC_00672	2.59e-257	pheS	6.1.1.20	-	J	ko:K01889	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
DPAKAGIC_00673	1.24e-83	yodB	-	-	K	-	-	-	Transcriptional regulator, HxlR family
DPAKAGIC_00674	3.67e-178	spoU	-	-	J	ko:K03437	-	ko00000,ko03016	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
DPAKAGIC_00675	1.37e-59	acyP	3.6.1.7	-	C	ko:K01512	ko00620,ko00627,ko01120,map00620,map00627,map01120	ko00000,ko00001,ko01000	Belongs to the acylphosphatase family
DPAKAGIC_00676	1.89e-209	yidC	-	-	U	ko:K03217	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044,ko03029	Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
DPAKAGIC_00677	0.0	arlS	2.7.13.3	-	T	ko:K18940	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
DPAKAGIC_00678	6.08e-164	csrR	-	-	K	-	-	-	response regulator
DPAKAGIC_00679	3.14e-127	ylbN	-	-	S	ko:K07040	-	ko00000	Uncharacterized ACR, COG1399
DPAKAGIC_00680	9.35e-275	ylbM	-	-	S	-	-	-	Belongs to the UPF0348 family
DPAKAGIC_00681	3.58e-78	rsfS	-	-	J	ko:K09710	-	ko00000,ko03009	Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
DPAKAGIC_00682	4.06e-145	yqeK	-	-	H	-	-	-	Hydrolase, HD family
DPAKAGIC_00683	8.11e-159	nadD	2.7.7.18	-	H	ko:K00969	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
DPAKAGIC_00684	4.26e-273	yqeH	-	-	S	ko:K06948	-	ko00000,ko03009	Ribosome biogenesis GTPase YqeH
DPAKAGIC_00685	1.66e-120	yqeG	-	-	S	ko:K07015	-	ko00000	HAD phosphatase, family IIIA
DPAKAGIC_00686	4.78e-253	tnpB	-	-	L	ko:K07496	-	ko00000	Putative transposase DNA-binding domain
DPAKAGIC_00687	8.82e-241	add	3.5.4.2, 3.5.4.4	-	F	ko:K01488,ko:K02029,ko:K21053	ko00230,ko01100,ko05340,map00230,map01100,map05340	ko00000,ko00001,ko00002,ko01000,ko02000	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
DPAKAGIC_00688	4.31e-76	rplT	-	-	J	ko:K02887	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
DPAKAGIC_00689	2.36e-38	rpmI	-	-	J	ko:K02916	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL35 family
DPAKAGIC_00690	9.48e-95	infC	-	-	J	ko:K02520	-	ko00000,ko03012,ko03029	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
DPAKAGIC_00691	1.92e-118	-	-	-	-	-	-	-	-
DPAKAGIC_00692	1.39e-92	-	-	-	S	-	-	-	Protein of unknown function (DUF3021)
DPAKAGIC_00693	2.67e-96	-	-	-	K	-	-	-	LytTr DNA-binding domain
DPAKAGIC_00694	0.0	thrS	6.1.1.3	-	J	ko:K01868	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
DPAKAGIC_00695	5.35e-215	dnaI	-	-	L	ko:K11144	-	ko00000,ko03032	Primosomal protein DnaI
DPAKAGIC_00696	0.0	dnaB2	-	-	L	ko:K03346	-	ko00000,ko03032	Replication initiation and membrane attachment
DPAKAGIC_00697	1.29e-106	nrdR	-	-	K	ko:K07738	-	ko00000,ko03000	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
DPAKAGIC_00698	5.52e-139	coaE	2.7.1.24	-	F	ko:K00859	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
DPAKAGIC_00699	6.72e-205	fpg	3.2.2.23, 4.2.99.18	-	L	ko:K10563	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
DPAKAGIC_00700	0.0	polA	2.7.7.7	-	L	ko:K02335	ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440	ko00000,ko00001,ko01000,ko03032,ko03400	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
DPAKAGIC_00701	0.0	purD	6.3.4.13	-	F	ko:K01945	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the GARS family
DPAKAGIC_00702	0.0	purH	2.1.2.3, 3.5.4.10	-	F	ko:K00602	ko00230,ko00670,ko01100,ko01110,ko01130,ko01523,map00230,map00670,map01100,map01110,map01130,map01523	ko00000,ko00001,ko00002,ko01000,ko04147	Bifunctional purine biosynthesis protein PurH
DPAKAGIC_00703	3.61e-144	purN	2.1.2.2	-	F	ko:K11175	ko00230,ko00670,ko01100,ko01110,ko01130,map00230,map00670,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
DPAKAGIC_00704	3.52e-253	purM	6.3.3.1	-	F	ko:K01933	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Phosphoribosylformylglycinamidine cyclo-ligase
DPAKAGIC_00705	0.0	purF	2.4.2.14	-	F	ko:K00764	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko01002	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
DPAKAGIC_00706	0.0	purL	6.3.5.3	-	F	ko:K01952	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
DPAKAGIC_00707	1.15e-165	purQ	6.3.5.3	-	F	ko:K01952	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
DPAKAGIC_00708	1.88e-52	purS	6.3.5.3	-	F	ko:K01952	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
DPAKAGIC_00709	1.24e-172	purC	6.3.2.6	-	F	ko:K01923	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the SAICAR synthetase family
DPAKAGIC_00710	1.85e-269	purK	6.3.4.18	-	F	ko:K01589	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
DPAKAGIC_00711	7.36e-109	purE	5.4.99.18	-	F	ko:K01588	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
DPAKAGIC_00712	0.0	fhs	6.3.4.3	-	F	ko:K01938	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Belongs to the formate--tetrahydrofolate ligase family
DPAKAGIC_00713	1.9e-160	-	-	-	C	-	-	-	Flavodoxin
DPAKAGIC_00714	5.58e-192	hflC	-	-	O	ko:K04087	-	ko00000,ko00002,ko01000	prohibitin homologues
DPAKAGIC_00715	2.68e-67	-	-	-	L	ko:K07473	-	ko00000,ko02048	RelB antitoxin
DPAKAGIC_00716	2.76e-249	-	-	-	S	-	-	-	Bacteriocin helveticin-J
DPAKAGIC_00717	0.0	-	-	-	M	-	-	-	Peptidase family M1 domain
DPAKAGIC_00718	2.45e-227	-	-	-	S	-	-	-	SLAP domain
DPAKAGIC_00719	2.86e-146	tnpB	-	-	L	ko:K07496	-	ko00000	Putative transposase DNA-binding domain
DPAKAGIC_00720	1.32e-123	-	-	-	L	ko:K07496	-	ko00000	Putative transposase DNA-binding domain
DPAKAGIC_00721	6.25e-304	mepA	-	-	V	ko:K18908	-	ko00000,ko00002,ko01504,ko02000	MATE efflux family protein
DPAKAGIC_00722	2.45e-214	-	3.5.3.1	-	E	ko:K01476	ko00220,ko00330,ko01100,ko01110,ko01130,ko01230,ko05146,map00220,map00330,map01100,map01110,map01130,map01230,map05146	ko00000,ko00001,ko00002,ko01000	Arginase family
DPAKAGIC_00723	1.09e-135	-	-	-	S	-	-	-	Membrane
DPAKAGIC_00724	0.0	bglH	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
DPAKAGIC_00725	0.0	-	-	-	G	ko:K02755,ko:K02757	ko02060,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
DPAKAGIC_00726	2.24e-41	-	2.7.1.208, 2.7.1.211	-	G	ko:K02749,ko:K02750,ko:K02755,ko:K02756,ko:K02757,ko:K02808,ko:K02809,ko:K02810	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DPAKAGIC_00727	2.69e-191	-	-	-	K	-	-	-	Helix-turn-helix domain, rpiR family
DPAKAGIC_00728	0.0	-	-	-	-	-	-	-	-
DPAKAGIC_00729	0.0	murC	6.3.2.8	-	M	ko:K01924	ko00471,ko00550,ko01100,map00471,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Belongs to the MurCDEF family
DPAKAGIC_00730	3.06e-157	XK27_10290	-	-	J	ko:K06878	-	ko00000	Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
DPAKAGIC_00731	5.52e-71	ytpP	-	-	CO	-	-	-	Thioredoxin
DPAKAGIC_00732	9.15e-165	trmB	2.1.1.33	-	J	ko:K03439	-	ko00000,ko01000,ko03016	Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
DPAKAGIC_00733	3.37e-273	ecsB	-	-	U	ko:K01992	-	ko00000,ko00002,ko02000	ABC transporter
DPAKAGIC_00734	3.15e-175	ecsA	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
DPAKAGIC_00735	1.38e-102	hit	-	-	FG	ko:K02503	-	ko00000,ko04147	Scavenger mRNA decapping enzyme C-term binding
DPAKAGIC_00736	3.51e-74	-	-	-	-	-	-	-	-
DPAKAGIC_00737	3.26e-199	prsA	5.2.1.8	-	M	ko:K07533	-	ko00000,ko01000,ko03110	Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
DPAKAGIC_00738	3.19e-239	yhaM	-	-	S	ko:K03698	-	ko00000,ko01000,ko03019	Metal dependent phosphohydrolases with conserved 'HD' motif.
DPAKAGIC_00739	0.0	yhaN	-	-	L	-	-	-	AAA domain
DPAKAGIC_00740	8.31e-295	yhaO	-	-	L	ko:K03547	-	ko00000,ko03400	Ser Thr phosphatase family protein
DPAKAGIC_00741	6.93e-72	yheA	-	-	S	-	-	-	Belongs to the UPF0342 family
DPAKAGIC_00742	0.0	pbp2A	2.4.1.129, 3.4.16.4	GT51	M	ko:K12555	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01003,ko01011	penicillin-binding protein
DPAKAGIC_00743	3.09e-208	rluA	5.4.99.23, 5.4.99.28, 5.4.99.29	-	J	ko:K06177,ko:K06180	-	ko00000,ko01000,ko03009,ko03016	Responsible for synthesis of pseudouridine from uracil
DPAKAGIC_00744	1.34e-182	glpF	-	-	U	ko:K02440	-	ko00000,ko02000	Belongs to the MIP aquaporin (TC 1.A.8) family
DPAKAGIC_00745	2.79e-154	-	-	-	-	-	-	-	-
DPAKAGIC_00746	2.45e-246	-	-	-	C	-	-	-	FMN-dependent dehydrogenase
DPAKAGIC_00747	1.48e-217	fba	4.1.2.13, 4.1.2.29	-	G	ko:K01624,ko:K03339	ko00010,ko00030,ko00051,ko00562,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00562,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Fructose-1,6-bisphosphate aldolase, class II
DPAKAGIC_00748	0.0	argS	6.1.1.19	-	J	ko:K01887	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Arginyl-tRNA synthetase
DPAKAGIC_00749	1.06e-164	-	-	-	M	-	-	-	ErfK YbiS YcfS YnhG
DPAKAGIC_00750	3.16e-197	nnrD	4.2.1.136, 5.1.99.6	-	H	ko:K17758,ko:K17759	-	ko00000,ko01000	Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
DPAKAGIC_00751	3.95e-310	dacA	3.4.16.4	-	M	ko:K07258	ko00550,ko01100,map00550,map01100	ko00000,ko00001,ko01000,ko01002,ko01011	Belongs to the peptidase S11 family
DPAKAGIC_00753	1.19e-71	pspC	-	-	KT	ko:K03973	-	ko00000,ko02048,ko03000	PspC domain
DPAKAGIC_00754	4.1e-251	flp	-	-	V	-	-	-	Beta-lactamase
DPAKAGIC_00755	3.16e-72	-	-	-	-	-	-	-	-
DPAKAGIC_00756	0.0	psd	4.1.1.65	-	I	ko:K01613	ko00564,ko01100,ko01110,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Belongs to the phosphatidylserine decarboxylase family
DPAKAGIC_00757	4.95e-53	-	-	-	S	-	-	-	Enterocin A Immunity
DPAKAGIC_00758	0.0	-	-	-	S	-	-	-	domain, Protein
DPAKAGIC_00759	6.41e-105	-	-	-	S	-	-	-	Cupin domain
DPAKAGIC_00760	0.0	-	-	-	D	-	-	-	Domain of Unknown Function (DUF1542)
DPAKAGIC_00761	1.39e-22	-	-	-	K	-	-	-	transcriptional regulator
DPAKAGIC_00762	3.3e-94	-	-	-	K	-	-	-	transcriptional regulator
DPAKAGIC_00764	0.0	ytgP	-	-	S	ko:K03328	-	ko00000	Polysaccharide biosynthesis protein
DPAKAGIC_00765	0.0	leuS	6.1.1.4	-	J	ko:K01869	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Belongs to the class-I aminoacyl-tRNA synthetase family
DPAKAGIC_00766	7.75e-153	yodM	3.6.1.27	-	I	ko:K19302	ko00550,map00550	ko00000,ko00001,ko01000,ko01011	Acid phosphatase homologues
DPAKAGIC_00767	7.6e-118	yumB	1.6.99.3	-	C	ko:K03885	ko00190,map00190	ko00000,ko00001,ko01000	NADH dehydrogenase
DPAKAGIC_00768	1.29e-150	yumB	1.6.99.3	-	C	ko:K03885	ko00190,map00190	ko00000,ko00001,ko01000	NADH dehydrogenase
DPAKAGIC_00769	1.37e-36	cydA	1.10.3.14	-	C	ko:K00425	ko00190,ko01100,ko02020,map00190,map01100,map02020	ko00000,ko00001,ko00002,ko01000	ubiquinol oxidase
DPAKAGIC_00770	0.0	mdr	-	-	EGP	-	-	-	Major Facilitator
DPAKAGIC_00771	5.35e-289	metK	2.5.1.6	-	H	ko:K00789	ko00270,ko01100,ko01110,ko01230,map00270,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
DPAKAGIC_00775	1.36e-241	manL	2.7.1.191	-	G	ko:K02793,ko:K02794	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system sorbose subfamily IIB component
DPAKAGIC_00776	1.67e-181	manY	-	-	G	ko:K02746,ko:K02795	ko00051,ko00052,ko00520,ko01100,ko02060,map00051,map00052,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	PTS system
DPAKAGIC_00777	1.18e-225	manN	-	-	G	ko:K02796	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	system, mannose fructose sorbose family IID component
DPAKAGIC_00778	2.86e-85	-	-	-	S	-	-	-	Domain of unknown function (DUF956)
DPAKAGIC_00779	7.93e-206	-	-	-	K	-	-	-	Transcriptional regulator
DPAKAGIC_00780	3.62e-89	-	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	transferase hexapeptide repeat
DPAKAGIC_00781	2.27e-315	aapA	-	-	E	ko:K03293,ko:K11737	-	ko00000,ko02000	Amino acid permease
DPAKAGIC_00782	0.0	adhE	1.1.1.1, 1.2.1.10	-	C	ko:K04072	ko00010,ko00071,ko00350,ko00620,ko00625,ko00626,ko00650,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00620,map00625,map00626,map00650,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	belongs to the iron- containing alcohol dehydrogenase family
DPAKAGIC_00783	0.0	glmS	2.6.1.16	-	M	ko:K00820	ko00250,ko00520,ko01100,ko01130,ko04931,map00250,map00520,map01100,map01130,map04931	ko00000,ko00001,ko01000,ko01002	Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
DPAKAGIC_00784	1.47e-285	ackA	2.7.2.1	-	F	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
DPAKAGIC_00785	1.63e-175	-	4.1.1.44	-	S	ko:K01607	ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220	ko00000,ko00001,ko01000	Carboxymuconolactone decarboxylase family
DPAKAGIC_00786	8.15e-94	apfA	3.6.1.61	-	F	ko:K18445	ko00230,map00230	ko00000,ko00001,ko01000	Nudix hydrolase
DPAKAGIC_00787	0.0	pckA	4.1.1.49	-	H	ko:K01610	ko00010,ko00020,ko00620,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00710,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Phosphoenolpyruvate carboxykinase
DPAKAGIC_00788	0.0	-	-	-	S	-	-	-	TerB-C domain
DPAKAGIC_00789	0.0	-	-	-	P	-	-	-	P-loop Domain of unknown function (DUF2791)
DPAKAGIC_00790	0.0	-	-	-	L	ko:K03724	-	ko00000,ko01000,ko03400	DEAD DEAH box helicase
DPAKAGIC_00791	4.47e-81	-	-	-	-	-	-	-	-
DPAKAGIC_00792	1.14e-294	amt	-	-	P	ko:K03320	-	ko00000,ko02000	ammonium transporter
DPAKAGIC_00793	8.42e-187	nfrA	1.5.1.38	-	C	ko:K19285	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	nitroreductase
DPAKAGIC_00795	1.99e-99	smpB	-	-	J	ko:K03664	-	ko00000	the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
DPAKAGIC_00796	0.0	rnr	-	-	J	ko:K12573	ko03018,map03018	ko00000,ko00001,ko01000,ko03016,ko03019	3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
DPAKAGIC_00797	5.29e-40	secG	-	-	U	ko:K03075	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Preprotein translocase
DPAKAGIC_00798	0.0	ltaS	2.7.8.20	-	M	ko:K19005	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
DPAKAGIC_00799	5.18e-228	mprF	-	-	S	ko:K07027	-	ko00000,ko02000	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
DPAKAGIC_00800	1.5e-255	cpoA	2.4.1.208	GT4	M	ko:K13677,ko:K13678	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000,ko01003	Glycosyltransferase, group 1 family protein
DPAKAGIC_00801	2.24e-284	-	2.4.1.337	GT4	M	ko:K19002	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000,ko01003	Glycosyl transferase 4-like domain
DPAKAGIC_00813	3.83e-61	-	-	-	L	-	-	-	Helicase C-terminal domain protein
DPAKAGIC_00814	0.0	-	-	-	L	-	-	-	Helicase C-terminal domain protein
DPAKAGIC_00815	1.98e-96	mutT	3.6.1.55	-	L	ko:K03574	-	ko00000,ko01000,ko03400	NUDIX domain
DPAKAGIC_00832	1.33e-75	-	-	-	-	-	-	-	-
DPAKAGIC_00833	1.02e-191	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
DPAKAGIC_00834	1.07e-163	-	-	-	S	-	-	-	Alpha/beta hydrolase family
DPAKAGIC_00835	2.63e-204	-	-	-	M	-	-	-	Glycosyltransferase like family 2
DPAKAGIC_00836	5.06e-182	-	-	-	S	-	-	-	Protein of unknown function (DUF1002)
DPAKAGIC_00837	2.82e-183	rnhA	3.1.26.4	-	L	ko:K03469	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
DPAKAGIC_00838	1.45e-231	-	-	-	S	-	-	-	Alpha/beta hydrolase of unknown function (DUF915)
DPAKAGIC_00839	0.0	cls	-	-	I	ko:K06131	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
DPAKAGIC_00840	9.36e-111	-	-	-	-	-	-	-	-
DPAKAGIC_00841	2.57e-171	cobB	-	-	K	ko:K12410	-	ko00000,ko01000	SIR2 family
DPAKAGIC_00842	9.33e-180	terC	-	-	P	-	-	-	Integral membrane protein TerC family
DPAKAGIC_00843	2.29e-85	yeaO	-	-	S	-	-	-	Protein of unknown function, DUF488
DPAKAGIC_00844	3.08e-159	yxlJ	3.2.2.21	-	L	ko:K03652	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Belongs to the DNA glycosylase MPG family
DPAKAGIC_00845	0.0	XK27_05795	-	-	P	ko:K17073,ko:K17074	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
DPAKAGIC_00846	2.21e-177	glnQ	-	-	E	ko:K17076	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
DPAKAGIC_00847	1.63e-233	yhaH	-	-	S	-	-	-	Protein of unknown function (DUF805)
DPAKAGIC_00848	2.73e-206	-	-	-	L	-	-	-	HNH nucleases
DPAKAGIC_00849	1.07e-157	yfbR	-	-	S	ko:K07023	-	ko00000	HD containing hydrolase-like enzyme
DPAKAGIC_00850	2.11e-271	-	-	-	G	-	-	-	Glycosyl hydrolases family 8
DPAKAGIC_00851	1.08e-288	ydaM	-	-	M	-	-	-	Glycosyl transferase family group 2
DPAKAGIC_00853	2.14e-197	-	-	-	-	-	-	-	-
DPAKAGIC_00854	9.69e-25	-	-	-	-	-	-	-	-
DPAKAGIC_00855	0.0	glpQ	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	Membrane domain of glycerophosphoryl diester phosphodiesterase
DPAKAGIC_00856	7.83e-91	-	-	-	S	-	-	-	Iron-sulphur cluster biosynthesis
DPAKAGIC_00857	3.36e-249	ysdE	-	-	P	-	-	-	Citrate transporter
DPAKAGIC_00858	1.43e-125	lemA	-	-	S	ko:K03744	-	ko00000	LemA family
DPAKAGIC_00859	9.9e-209	htpX	-	-	O	ko:K03799	-	ko00000,ko00002,ko01000,ko01002	Belongs to the peptidase M48B family
DPAKAGIC_00860	2.11e-222	-	-	-	K	-	-	-	helix_turn_helix, arabinose operon control protein
DPAKAGIC_00861	0.0	-	-	-	S	ko:K16786,ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
DPAKAGIC_00862	6.92e-130	-	-	-	P	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Cobalt transport protein
DPAKAGIC_00863	8e-226	pepI	3.4.11.5	-	E	ko:K01259	ko00330,map00330	ko00000,ko00001,ko01000,ko01002	Releases the N-terminal proline from various substrates
DPAKAGIC_00864	1.09e-157	-	-	-	-	-	-	-	-
DPAKAGIC_00865	1.98e-26	-	-	-	-	-	-	-	-
DPAKAGIC_00866	0.0	-	-	-	S	-	-	-	CAAX protease self-immunity
DPAKAGIC_00868	1.51e-194	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
DPAKAGIC_00869	2.48e-106	rlmH	2.1.1.177	-	J	ko:K00783	-	ko00000,ko01000,ko03009	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
DPAKAGIC_00870	3.14e-256	htrA	3.4.21.107	-	O	ko:K04771	ko01503,ko02020,map01503,map02020	ko00000,ko00001,ko00002,ko01000,ko01002,ko03110	serine protease
DPAKAGIC_00871	9.1e-193	vicX	3.1.26.11	-	S	ko:K00784	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	domain protein
DPAKAGIC_00872	3.54e-190	yycI	-	-	S	-	-	-	YycH protein
DPAKAGIC_00873	0.0	yycH	-	-	S	-	-	-	YycH protein
DPAKAGIC_00874	0.0	vicK	2.7.13.3	-	T	ko:K07652	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
DPAKAGIC_00875	9.77e-170	yycF	-	-	K	ko:K07668	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	response regulator
DPAKAGIC_00878	2.11e-133	hpt	2.4.2.8	-	F	ko:K00760	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the purine pyrimidine phosphoribosyltransferase family
DPAKAGIC_00879	0.0	yhdP	-	-	S	-	-	-	Transporter associated domain
DPAKAGIC_00880	9.09e-156	-	-	-	C	-	-	-	nitroreductase
DPAKAGIC_00881	1.51e-53	-	-	-	-	-	-	-	-
DPAKAGIC_00882	5.61e-113	ptbA	2.7.1.208	-	G	ko:K02755,ko:K02777,ko:K20107,ko:K20108	ko00010,ko00500,ko00520,ko02026,ko02060,ko05111,map00010,map00500,map00520,map02026,map02060,map05111	ko00000,ko00001,ko00002,ko01000,ko02000	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
DPAKAGIC_00883	2.25e-105	-	-	-	-	-	-	-	-
DPAKAGIC_00884	1.1e-191	glvR	-	-	K	ko:K03481	-	ko00000,ko03000	Helix-turn-helix domain, rpiR family
DPAKAGIC_00885	0.0	glvC	2.7.1.208	-	G	ko:K02749,ko:K02750	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system, EIIB
DPAKAGIC_00886	1.35e-196	-	-	-	S	-	-	-	hydrolase
DPAKAGIC_00887	5.93e-284	-	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
DPAKAGIC_00888	8.04e-187	-	-	-	K	ko:K07707	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko02022	LytTr DNA-binding domain
DPAKAGIC_00889	7.37e-293	-	2.7.13.3	-	T	ko:K07706	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	GHKL domain
DPAKAGIC_00890	2.25e-206	-	-	-	S	-	-	-	Phospholipase, patatin family
DPAKAGIC_00891	0.0	xfp	4.1.2.22, 4.1.2.9	-	G	ko:K01621	ko00030,ko00710,ko01100,ko01120,map00030,map00710,map01100,map01120	ko00000,ko00001,ko01000	Phosphoketolase
DPAKAGIC_00892	3.4e-178	-	-	-	K	ko:K22103	-	ko00000,ko03000	DeoR C terminal sensor domain
DPAKAGIC_00893	7.73e-79	-	-	-	S	-	-	-	Enterocin A Immunity
DPAKAGIC_00894	0.0	lmrA	3.6.3.44	-	V	ko:K02021,ko:K18104	ko01501,ko02010,map01501,map02010	ko00000,ko00001,ko00002,ko01000,ko01504,ko02000	ABC transporter
DPAKAGIC_00895	1.21e-93	-	-	-	K	ko:K18909	-	ko00000,ko00002,ko01504,ko03000	helix_turn_helix multiple antibiotic resistance protein
DPAKAGIC_00896	2.07e-197	-	3.1.3.102, 3.1.3.104	-	S	ko:K20861	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	hydrolase
DPAKAGIC_00897	0.0	-	-	-	V	-	-	-	ABC transporter transmembrane region
DPAKAGIC_00898	5.7e-146	-	-	-	-	-	-	-	-
DPAKAGIC_00899	1.81e-28	-	-	-	-	-	-	-	-
DPAKAGIC_00900	1.98e-175	gntR	-	-	K	-	-	-	UbiC transcription regulator-associated domain protein
DPAKAGIC_00901	3.51e-223	rihC	3.2.2.1	-	F	ko:K01239,ko:K01250,ko:K12700	ko00230,ko00760,ko01100,map00230,map00760,map01100	ko00000,ko00001,ko01000	Nucleoside
DPAKAGIC_00902	0.0	kup	-	-	P	ko:K03549	-	ko00000,ko02000	Transport of potassium into the cell
DPAKAGIC_00903	3.83e-163	rpiA	5.3.1.6	-	G	ko:K01807	ko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
DPAKAGIC_00904	9.2e-214	rbsK	2.7.1.15	-	H	ko:K00852	ko00030,map00030	ko00000,ko00001,ko01000	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
DPAKAGIC_00905	5.34e-211	-	-	-	C	-	-	-	Domain of unknown function (DUF4931)
DPAKAGIC_00906	5.02e-313	srrA1	-	-	G	ko:K02027,ko:K17244	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding protein
DPAKAGIC_00907	2.75e-95	-	-	-	-	-	-	-	-
DPAKAGIC_00908	3.66e-224	-	-	-	S	-	-	-	Protein of unknown function (DUF2974)
DPAKAGIC_00909	8.28e-143	glnP	-	-	P	ko:K10040	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
DPAKAGIC_00910	1.43e-136	glnM	-	-	P	ko:K10040	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
DPAKAGIC_00911	4.3e-190	glnH	-	-	ET	ko:K10039	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
DPAKAGIC_00912	2.39e-174	glnQ	-	-	E	ko:K10041	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
DPAKAGIC_00913	1.92e-148	udk	2.7.1.48	-	F	ko:K00876	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	Zeta toxin
DPAKAGIC_00914	8.88e-132	ykoE	-	-	S	ko:K16925	-	ko00000,ko00002,ko02000	ABC-type cobalt transport system, permease component
DPAKAGIC_00915	0.0	XK27_09605	-	-	V	ko:K18892	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter transmembrane region
DPAKAGIC_00916	0.0	XK27_09600	-	-	V	ko:K06147,ko:K18891	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter, ATP-binding protein
DPAKAGIC_00917	6.57e-102	-	-	-	K	-	-	-	Transcriptional regulator, MarR family
DPAKAGIC_00918	2.22e-192	peb1A	-	-	ET	ko:K10039	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
DPAKAGIC_00919	1.4e-188	-	-	-	-	-	-	-	-
DPAKAGIC_00920	0.0	ykpA	-	-	S	-	-	-	ABC transporter, ATP-binding protein
DPAKAGIC_00921	7.56e-267	pepA	-	-	E	-	-	-	M42 glutamyl aminopeptidase
DPAKAGIC_00922	1.11e-212	-	-	-	S	ko:K07088	-	ko00000	Membrane transport protein
DPAKAGIC_00923	3.81e-274	pmrA	-	-	EGP	ko:K08161	-	ko00000,ko02000	MFS_1 like family
DPAKAGIC_00924	0.0	qacA	-	-	EGP	-	-	-	Major Facilitator
DPAKAGIC_00925	2.03e-67	-	3.1.3.102, 3.1.3.104	-	Q	ko:K20861	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	phosphatase activity
DPAKAGIC_00926	3.27e-110	-	3.1.3.102, 3.1.3.104	-	S	ko:K20861	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Sucrose-6F-phosphate phosphohydrolase
DPAKAGIC_00927	1.39e-118	pyrR	2.4.2.9	-	F	ko:K02825	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000,ko03000	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
DPAKAGIC_00928	5.36e-305	pyrP	-	-	F	ko:K02824	-	ko00000,ko02000	Permease
DPAKAGIC_00929	5.81e-165	XK27_08575	-	-	V	ko:K06148	-	ko00000,ko02000	cysteine transport
DPAKAGIC_00930	5.13e-141	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
DPAKAGIC_00931	4.73e-206	-	1.1.1.346	-	S	ko:K06221	-	ko00000,ko01000	reductase
DPAKAGIC_00932	3.79e-101	-	-	-	K	-	-	-	acetyltransferase
DPAKAGIC_00933	0.0	-	4.2.1.53	-	S	ko:K10254	-	ko00000,ko01000	Myosin-crossreactive antigen
DPAKAGIC_00934	1.25e-118	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
DPAKAGIC_00935	1.88e-174	-	-	-	S	-	-	-	CAAX protease self-immunity
DPAKAGIC_00936	0.0	qacA	-	-	EGP	-	-	-	Major Facilitator
DPAKAGIC_00941	3.49e-123	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
DPAKAGIC_00942	9.05e-231	-	-	-	L	-	-	-	Recombinase zinc beta ribbon domain
DPAKAGIC_00943	3.28e-122	-	-	-	L	-	-	-	Resolvase, N terminal domain
DPAKAGIC_00944	2.98e-246	-	-	-	L	ko:K06400	-	ko00000	Recombinase
DPAKAGIC_00945	2.43e-76	-	5.1.1.13	-	M	ko:K01779	ko00250,ko01054,map00250,map01054	ko00000,ko00001,ko01000	Asp/Glu/Hydantoin racemase
DPAKAGIC_00946	3.15e-62	-	5.1.1.13	-	M	ko:K01779	ko00250,ko01054,map00250,map01054	ko00000,ko00001,ko01000	Asp/Glu/Hydantoin racemase
DPAKAGIC_00947	5.16e-146	ung2	-	-	L	-	-	-	Uracil-DNA glycosylase
DPAKAGIC_00948	9.1e-148	fnr	-	-	K	ko:K21562	-	ko00000,ko03000	Transcriptional regulator, Crp Fnr family
DPAKAGIC_00949	1.05e-124	dpsB	-	-	P	-	-	-	Belongs to the Dps family
DPAKAGIC_00950	5.51e-46	-	-	-	C	-	-	-	Heavy-metal-associated domain
DPAKAGIC_00951	0.0	cadA	3.6.3.3, 3.6.3.5	-	P	ko:K01534	-	ko00000,ko01000	E1-E2 ATPase
DPAKAGIC_00952	1.48e-82	-	-	-	-	-	-	-	-
DPAKAGIC_00953	4.2e-30	-	-	-	-	-	-	-	-
DPAKAGIC_00954	0.0	rumA_2	2.1.1.190	-	J	ko:K03215	-	ko00000,ko01000,ko03009	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
DPAKAGIC_00955	1.28e-310	nhaC	-	-	C	ko:K03315	-	ko00000,ko02000	Na H antiporter NhaC
DPAKAGIC_00956	4.94e-75	-	-	-	-	-	-	-	-
DPAKAGIC_00957	4.33e-126	ybhL	-	-	S	ko:K06890	-	ko00000	Belongs to the BI1 family
DPAKAGIC_00958	2.37e-220	dagK	2.7.1.107	-	G	ko:K07029	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko01000	Lipid kinase
DPAKAGIC_00959	0.0	gatB	6.3.5.6, 6.3.5.7	-	J	ko:K02434	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
DPAKAGIC_00960	0.0	gatA	6.3.5.6, 6.3.5.7	-	J	ko:K02433	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
DPAKAGIC_00961	4.46e-66	gatC	6.3.5.6, 6.3.5.7	-	J	ko:K02435	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
DPAKAGIC_00962	7.29e-267	camS	-	-	S	-	-	-	sex pheromone
DPAKAGIC_00963	0.0	ligA	6.5.1.2	-	L	ko:K01972	ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430	ko00000,ko00001,ko01000,ko03032,ko03400	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
DPAKAGIC_00964	0.0	pcrA	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	ATP-dependent DNA helicase
DPAKAGIC_00965	1.02e-146	acmA	3.2.1.17, 3.2.1.96	-	NU	ko:K01185,ko:K01227	ko00511,map00511	ko00000,ko00001,ko01000	mannosyl-glycoprotein
DPAKAGIC_00967	6.32e-83	ydcK	-	-	S	ko:K03095	-	ko00000	Belongs to the SprT family
DPAKAGIC_00968	8.44e-177	-	-	-	M	-	-	-	Glycosyltransferase sugar-binding region containing DXD motif
DPAKAGIC_00969	0.0	epsU	-	-	S	ko:K03328	-	ko00000	Polysaccharide biosynthesis protein
DPAKAGIC_00970	3.89e-288	-	-	-	M	-	-	-	CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
DPAKAGIC_00971	0.0	pacL	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	P-type ATPase
DPAKAGIC_00972	5.7e-197	nadE	6.3.1.5	-	F	ko:K01916	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
DPAKAGIC_00973	0.0	pncB	6.3.4.21	-	F	ko:K00763	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
DPAKAGIC_00974	1.85e-264	-	-	-	M	-	-	-	Glycosyl transferases group 1
DPAKAGIC_00975	1.39e-171	tagA	2.4.1.187	GT26	F	ko:K05946	ko05111,map05111	ko00000,ko00001,ko01000,ko01003	Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
DPAKAGIC_00976	2.13e-92	tagD	2.7.7.39	-	IM	ko:K00980	ko00564,map00564	ko00000,ko00001,ko01000	Glycerol-3-phosphate cytidylyltransferase
DPAKAGIC_00977	1.33e-160	gntR1	-	-	K	ko:K03710	-	ko00000,ko03000	UTRA
DPAKAGIC_00978	5.81e-272	-	-	-	-	-	-	-	-
DPAKAGIC_00981	0.0	slpX	-	-	S	-	-	-	SLAP domain
DPAKAGIC_00982	6.76e-227	pfoSR	-	-	S	ko:K07035	-	ko00000	Phosphotransferase system, EIIC
DPAKAGIC_00984	3.18e-92	-	-	-	EGP	-	-	-	Major Facilitator
DPAKAGIC_00985	0.0	gtfA	2.4.1.7	GH13	G	ko:K00690	ko00500,map00500	ko00000,ko00001,ko01000	Sucrose glucosyltransferase
DPAKAGIC_00986	8.89e-270	msmX	-	-	P	ko:K10112	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
DPAKAGIC_00987	0.0	sacA	3.2.1.26	GH32	G	ko:K01193	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Glycosyl hydrolases family 32
DPAKAGIC_00988	2.93e-199	msmG	-	-	G	ko:K02026,ko:K10122	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
DPAKAGIC_00989	1.78e-209	-	-	-	P	ko:K10121	-	ko00000,ko00002,ko02000	ABC-type sugar transport systems, permease components
DPAKAGIC_00990	0.0	-	-	-	G	ko:K02027,ko:K10120	-	ko00000,ko00002,ko02000	Bacterial extracellular solute-binding protein
DPAKAGIC_00991	7.11e-236	lacI	-	-	K	ko:K02529	-	ko00000,ko03000	helix_turn _helix lactose operon repressor
DPAKAGIC_00992	9.11e-69	glpQ1	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	glycerophosphoryl diester phosphodiesterase
DPAKAGIC_00993	9.82e-156	-	-	-	G	-	-	-	Antibiotic biosynthesis monooxygenase
DPAKAGIC_00994	2.57e-139	-	-	-	G	-	-	-	Histidine phosphatase superfamily (branch 1)
DPAKAGIC_00995	1e-142	-	-	-	G	-	-	-	Phosphoglycerate mutase family
DPAKAGIC_00996	3.81e-253	-	-	-	D	-	-	-	nuclear chromosome segregation
DPAKAGIC_00997	2.62e-111	-	-	-	M	-	-	-	LysM domain protein
DPAKAGIC_00998	4.35e-207	-	-	-	O	-	-	-	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
DPAKAGIC_00999	0.0	licC	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
DPAKAGIC_01000	2.6e-19	-	-	-	-	-	-	-	-
DPAKAGIC_01001	1.48e-219	pphA	3.1.3.16	-	T	ko:K07313	-	ko00000,ko01000	Calcineurin-like phosphoesterase
DPAKAGIC_01002	3.99e-88	-	-	-	-	-	-	-	-
DPAKAGIC_01003	3.99e-45	-	-	-	-	-	-	-	-
DPAKAGIC_01004	1.27e-90	-	-	-	S	-	-	-	Iron-sulphur cluster biosynthesis
DPAKAGIC_01005	8.71e-157	-	-	-	-	-	-	-	-
DPAKAGIC_01006	4.27e-293	aapA	-	-	E	ko:K03293,ko:K11737	-	ko00000,ko02000	Amino acid permease
DPAKAGIC_01007	1.84e-314	yifK	-	-	E	ko:K03293	-	ko00000	Amino acid permease
DPAKAGIC_01008	1.4e-180	puuD	-	-	S	ko:K07010	-	ko00000,ko01002	peptidase C26
DPAKAGIC_01009	1e-305	-	-	-	E	-	-	-	amino acid
DPAKAGIC_01010	1.27e-70	-	-	-	CO	ko:K03671	ko04621,ko05418,map04621,map05418	ko00000,ko00001,ko03110	Thioredoxin
DPAKAGIC_01011	1.75e-10	-	-	-	-	-	-	-	-
DPAKAGIC_01012	6.09e-152	-	-	-	K	-	-	-	Rhodanese Homology Domain
DPAKAGIC_01013	1.23e-224	trxB	1.8.1.9	-	C	ko:K00384	ko00450,map00450	ko00000,ko00001,ko01000	Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
DPAKAGIC_01014	6.65e-153	frnE	5.3.4.1	-	Q	ko:K01829	-	ko00000,ko01000	DSBA-like thioredoxin domain
DPAKAGIC_01015	4.6e-249	asnA	6.3.1.1	-	F	ko:K01914	ko00250,ko00460,ko01100,ko01110,ko01230,map00250,map00460,map01100,map01110,map01230	ko00000,ko00001,ko01000	aspartate--ammonia ligase
DPAKAGIC_01016	1.69e-259	-	4.2.1.126	-	S	ko:K07106,ko:K09963	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Bacterial protein of unknown function (DUF871)
DPAKAGIC_01019	2.84e-240	guaC	1.7.1.7	-	F	ko:K00364	ko00230,map00230	ko00000,ko00001,ko01000	Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
DPAKAGIC_01020	0.0	purA	6.3.4.4	-	F	ko:K01939	ko00230,ko00250,ko01100,map00230,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
DPAKAGIC_01021	1.14e-313	purB	4.3.2.2	-	F	ko:K01756	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
DPAKAGIC_01022	6.33e-74	-	-	-	-	-	-	-	-
DPAKAGIC_01023	7.08e-137	-	-	-	-	-	-	-	-
DPAKAGIC_01024	1.41e-209	yicL	-	-	EG	-	-	-	EamA-like transporter family
DPAKAGIC_01025	1.03e-211	-	-	-	EG	-	-	-	EamA-like transporter family
DPAKAGIC_01026	8.16e-212	-	-	-	EG	-	-	-	EamA-like transporter family
DPAKAGIC_01027	1.96e-108	-	-	-	M	-	-	-	NlpC/P60 family
DPAKAGIC_01028	1.91e-171	cobQ	-	-	S	ko:K07009	-	ko00000	glutamine amidotransferase
DPAKAGIC_01029	9.67e-220	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
DPAKAGIC_01030	1.23e-83	-	-	-	S	-	-	-	Protein conserved in bacteria
DPAKAGIC_01031	6.65e-194	thiD	2.7.1.49, 2.7.4.7	-	H	ko:K00941	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Phosphomethylpyrimidine kinase
DPAKAGIC_01032	0.0	glpK	2.7.1.30	-	F	ko:K00864	ko00561,ko01100,ko03320,ko04626,map00561,map01100,map03320,map04626	ko00000,ko00001,ko01000,ko04147	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
DPAKAGIC_01033	1.06e-20	-	-	-	-	-	-	-	-
DPAKAGIC_01034	4.8e-99	-	-	-	-	-	-	-	-
DPAKAGIC_01035	0.0	-	-	-	V	ko:K06147,ko:K06148	-	ko00000,ko02000	ABC transporter transmembrane region
DPAKAGIC_01036	7.79e-190	-	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Tyrosine phosphatase family
DPAKAGIC_01037	7.43e-229	yvdE	-	-	K	-	-	-	helix_turn _helix lactose operon repressor
DPAKAGIC_01038	1.82e-276	ackA	2.7.2.1	-	F	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
DPAKAGIC_01039	0.0	malA1	3.2.1.10, 3.2.1.20	GH13,GH31	G	ko:K01182,ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Alpha amylase, catalytic domain
DPAKAGIC_01040	0.0	nplT	3.2.1.133, 3.2.1.135, 3.2.1.54	GH13	G	ko:K01208	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 13 family
DPAKAGIC_01041	0.0	mapA	2.4.1.8	GH65	G	ko:K00691	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	hydrolase, family 65, central catalytic
DPAKAGIC_01042	1.23e-150	pgmB	5.4.2.6	-	S	ko:K01838	ko00500,map00500	ko00000,ko00001,ko01000	beta-phosphoglucomutase
DPAKAGIC_01043	9.65e-42	-	-	-	K	-	-	-	LysR substrate binding domain
DPAKAGIC_01044	3.73e-65	-	-	-	K	-	-	-	LysR substrate binding domain
DPAKAGIC_01045	4.38e-74	-	-	-	S	-	-	-	FMN_bind
DPAKAGIC_01046	1.87e-292	-	1.3.5.4	-	C	ko:K00244	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	ko00000,ko00001,ko00002,ko01000	FAD binding domain
DPAKAGIC_01047	3.17e-149	-	-	-	K	-	-	-	Transcriptional regulator, LysR family
DPAKAGIC_01048	2.5e-51	-	-	-	S	-	-	-	Cytochrome B5
DPAKAGIC_01049	2.27e-214	arbZ	-	-	I	-	-	-	Phosphate acyltransferases
DPAKAGIC_01050	1.34e-235	-	-	-	M	-	-	-	Glycosyl transferase family 8
DPAKAGIC_01051	1.07e-238	-	-	-	M	-	-	-	Glycosyl transferase family 8
DPAKAGIC_01052	6.45e-204	arbx	-	-	M	-	-	-	Glycosyl transferase family 8
DPAKAGIC_01053	1.11e-191	-	-	-	I	-	-	-	Acyl-transferase
DPAKAGIC_01054	8.36e-102	-	-	-	-	-	-	-	-
DPAKAGIC_01055	0.0	-	-	-	P	ko:K06148	-	ko00000,ko02000	ABC transporter
DPAKAGIC_01056	0.0	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
DPAKAGIC_01057	2.79e-296	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
DPAKAGIC_01058	6.89e-06	-	-	-	-	-	-	-	-
DPAKAGIC_01059	3.69e-244	-	-	-	EP	-	-	-	Plasmid replication protein
DPAKAGIC_01061	2.66e-270	-	-	-	D	-	-	-	COG1674 DNA segregation ATPase FtsK SpoIIIE and related proteins
DPAKAGIC_01062	8.66e-76	-	-	-	-	-	-	-	-
DPAKAGIC_01064	8.37e-161	-	-	-	V	-	-	-	site-specific DNA-methyltransferase (adenine-specific) activity
DPAKAGIC_01065	1.41e-208	-	2.1.1.72	-	L	ko:K06223	ko03430,map03430	ko00000,ko00001,ko01000,ko02048,ko03032,ko03400	DNA methyltransferase
DPAKAGIC_01066	0.0	-	-	-	S	-	-	-	AAA ATPase domain
DPAKAGIC_01067	0.0	-	-	-	L	-	-	-	Type III restriction enzyme, res subunit
DPAKAGIC_01068	1.46e-240	lacR	-	-	K	ko:K02529	-	ko00000,ko03000	Transcriptional regulator
DPAKAGIC_01069	0.0	lacL	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 2 family
DPAKAGIC_01070	8.15e-242	lacM	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	beta-galactosidase
DPAKAGIC_01071	1.79e-243	galE	5.1.3.2	-	M	ko:K01784	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the NAD(P)-dependent epimerase dehydratase family
DPAKAGIC_01072	0.0	-	-	-	S	-	-	-	Domain of unknown function (DUF5060)
DPAKAGIC_01073	1.05e-274	-	-	-	EGP	-	-	-	Transporter, major facilitator family protein
DPAKAGIC_01074	2.88e-223	rbsR	-	-	K	ko:K02529	-	ko00000,ko03000	helix_turn _helix lactose operon repressor
DPAKAGIC_01075	0.0	-	3.2.1.40	-	G	ko:K05989	-	ko00000,ko01000	Alpha-L-rhamnosidase N-terminal domain
DPAKAGIC_01076	2e-79	-	-	-	G	-	-	-	polysaccharide catabolic process
DPAKAGIC_01078	0.0	serS	6.1.1.11	-	J	ko:K01875	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
DPAKAGIC_01079	1.28e-131	yjcK	2.3.1.128	-	J	ko:K03790	-	ko00000,ko01000,ko03009	Acetyltransferase (GNAT) domain
DPAKAGIC_01080	1.47e-144	-	-	-	S	-	-	-	SNARE associated Golgi protein
DPAKAGIC_01081	1.84e-196	-	-	-	I	-	-	-	alpha/beta hydrolase fold
DPAKAGIC_01082	4.92e-207	plcR	-	-	K	ko:K20480	ko02024,map02024	ko00000,ko00001,ko03000	Helix-turn-helix
DPAKAGIC_01083	3.62e-121	-	-	-	F	-	-	-	Nucleoside 2-deoxyribosyltransferase
DPAKAGIC_01084	0.0	gabD	1.2.1.16, 1.2.1.20, 1.2.1.79	-	C	ko:K00135	ko00250,ko00310,ko00350,ko00650,ko00760,ko01100,ko01120,map00250,map00310,map00350,map00650,map00760,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Belongs to the aldehyde dehydrogenase family
DPAKAGIC_01085	0.0	-	-	-	M	-	-	-	Rib/alpha-like repeat
DPAKAGIC_01086	0.0	-	-	-	M	-	-	-	Rib/alpha-like repeat
DPAKAGIC_01087	6.9e-220	-	-	-	-	-	-	-	-
DPAKAGIC_01088	0.0	ydgH	-	-	S	ko:K06994	-	ko00000	MMPL family
DPAKAGIC_01089	1.8e-124	yobS	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
DPAKAGIC_01090	2.62e-198	-	3.5.2.6	-	V	ko:K17836	ko00311,ko01130,ko01501,map00311,map01130,map01501	ko00000,ko00001,ko00002,ko01000,ko01504	Beta-lactamase enzyme family
DPAKAGIC_01091	7.19e-202	corA	-	-	P	ko:K03284	-	ko00000,ko02000	CorA-like Mg2+ transporter protein
DPAKAGIC_01092	2.47e-309	-	-	-	G	ko:K02027	-	ko00000,ko00002,ko02000	Bacterial extracellular solute-binding protein
DPAKAGIC_01093	0.0	-	-	-	S	-	-	-	Zn-dependent metallo-hydrolase RNA specificity domain
DPAKAGIC_01094	1.68e-188	-	-	-	P	ko:K02026	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
DPAKAGIC_01095	1.24e-197	-	-	-	P	ko:K02025	-	ko00000,ko00002,ko02000	ABC-type sugar transport systems, permease components
DPAKAGIC_01096	9.81e-259	malK	-	-	P	ko:K10112,ko:K17240	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ATPases associated with a variety of cellular activities
DPAKAGIC_01097	0.0	pepD1	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
DPAKAGIC_01098	4.53e-203	endA	-	-	F	ko:K15051	-	ko00000	DNA RNA non-specific endonuclease
DPAKAGIC_01099	4e-234	-	2.7.7.7	-	L	ko:K02342	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	EXOIII
DPAKAGIC_01100	4.72e-200	-	-	-	K	-	-	-	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
DPAKAGIC_01101	7.21e-150	yviA	-	-	S	-	-	-	Protein of unknown function (DUF421)
DPAKAGIC_01102	9.54e-97	-	-	-	S	-	-	-	Protein of unknown function (DUF3290)
DPAKAGIC_01103	0.0	-	-	-	M	-	-	-	domain protein
DPAKAGIC_01104	3.05e-181	pnuC	-	-	H	ko:K03811	-	ko00000,ko02000	nicotinamide mononucleotide transporter
DPAKAGIC_01105	0.0	-	-	-	-	-	-	-	-
DPAKAGIC_01106	7.95e-64	-	-	-	-	-	-	-	-
DPAKAGIC_01107	9.1e-184	-	-	-	S	-	-	-	PAS domain
DPAKAGIC_01108	0.0	-	-	-	V	-	-	-	ABC transporter transmembrane region
DPAKAGIC_01109	5.44e-230	pepR	3.4.11.5	-	E	ko:K01259	ko00330,map00330	ko00000,ko00001,ko01000,ko01002	Releases the N-terminal proline from various substrates
DPAKAGIC_01110	2.91e-164	-	-	-	T	-	-	-	Transcriptional regulatory protein, C terminal
DPAKAGIC_01111	4.14e-312	-	-	-	T	-	-	-	GHKL domain
DPAKAGIC_01112	2.36e-112	ykoJ	-	-	S	-	-	-	Peptidase propeptide and YPEB domain
DPAKAGIC_01113	1.34e-131	-	-	-	S	-	-	-	Peptidase propeptide and YPEB domain
DPAKAGIC_01114	4.9e-100	yybA	-	-	K	-	-	-	Transcriptional regulator
DPAKAGIC_01115	3.59e-123	XK27_03150	2.3.1.57	-	K	ko:K22441	-	ko00000,ko01000	Acetyltransferase (GNAT) domain
DPAKAGIC_01116	0.0	oppA	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
DPAKAGIC_01117	2.28e-72	-	-	-	S	ko:K08987	-	ko00000	Protein of unknown function (DUF1304)
DPAKAGIC_01118	9.2e-130	-	-	-	S	-	-	-	Peptidase propeptide and YPEB domain
DPAKAGIC_01119	8.57e-134	efp	-	-	J	ko:K02356	-	ko00000,ko03012	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
DPAKAGIC_01120	3.51e-221	coaA	2.7.1.33	-	F	ko:K00867	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Pantothenic acid kinase
DPAKAGIC_01121	1.68e-133	-	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase
DPAKAGIC_01122	1.25e-106	yjcF	-	-	S	-	-	-	Acetyltransferase (GNAT) domain
DPAKAGIC_01123	2.71e-193	aatB	-	-	ET	ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter substrate-binding protein
DPAKAGIC_01124	1.29e-140	glnQ	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	ABC transporter
DPAKAGIC_01125	3e-139	yecS_2	-	-	P	ko:K02029,ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter permease
DPAKAGIC_01126	2.14e-31	helD	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	DNA helicase
DPAKAGIC_01127	0.0	helD	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	DNA helicase
DPAKAGIC_01128	1.69e-160	XK27_08875	-	-	O	-	-	-	PFAM peptidase M10A and M12B, matrixin and adamalysin
DPAKAGIC_01129	7.53e-163	gpm2	-	-	G	-	-	-	Phosphoglycerate mutase family
DPAKAGIC_01130	0.0	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	FtsX-like permease family
DPAKAGIC_01131	3.02e-174	cysA	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
DPAKAGIC_01132	7.62e-308	-	-	-	S	-	-	-	response to antibiotic
DPAKAGIC_01133	1.39e-164	-	-	-	-	-	-	-	-
DPAKAGIC_01134	0.0	pacL3	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	P-type ATPase
DPAKAGIC_01135	3.66e-85	-	2.7.1.191	-	G	ko:K02793	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system fructose IIA component
DPAKAGIC_01136	3.45e-64	-	-	-	-	-	-	-	-
DPAKAGIC_01137	1.25e-22	-	-	-	-	-	-	-	-
DPAKAGIC_01138	1.35e-238	ansA	3.5.1.1	-	EJ	ko:K01424	ko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110	ko00000,ko00001,ko01000	L-asparaginase, type I
DPAKAGIC_01139	7.07e-178	-	-	-	K	ko:K03481	-	ko00000,ko03000	Helix-turn-helix domain, rpiR family
DPAKAGIC_01140	0.0	malH	3.2.1.122	GH4	G	ko:K01232	ko00500,map00500	ko00000,ko00001,ko01000	Family 4 glycosyl hydrolase C-terminal domain
DPAKAGIC_01141	8.44e-201	-	-	-	-	-	-	-	-
DPAKAGIC_01142	1.6e-119	-	-	-	-	-	-	-	-
DPAKAGIC_01143	3.39e-138	-	-	-	K	ko:K06977	-	ko00000	acetyltransferase
DPAKAGIC_01146	0.0	aspD	4.1.1.12	-	E	ko:K09758	ko00250,ko00270,ko01100,ko01230,map00250,map00270,map01100,map01230	ko00000,ko00001,ko01000	Aminotransferase
DPAKAGIC_01147	0.0	-	-	-	P	ko:K07085	-	ko00000	Predicted Permease Membrane Region
DPAKAGIC_01148	5.59e-250	-	-	-	S	-	-	-	Domain of unknown function (DUF4767)
DPAKAGIC_01149	1.56e-256	-	-	-	S	-	-	-	Membrane
DPAKAGIC_01150	1.71e-191	exoA	3.1.11.2	-	L	ko:K01142	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	exodeoxyribonuclease III
DPAKAGIC_01151	7.86e-240	-	-	-	K	-	-	-	helix_turn_helix, arabinose operon control protein
DPAKAGIC_01152	3.86e-239	-	-	-	K	-	-	-	helix_turn_helix, arabinose operon control protein
DPAKAGIC_01153	1.96e-192	yleF	-	-	K	-	-	-	Helix-turn-helix domain, rpiR family
DPAKAGIC_01154	1.06e-258	yleB	4.2.1.126	-	S	ko:K07106,ko:K09963	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Bacterial protein of unknown function (DUF871)
DPAKAGIC_01155	1.24e-202	murQ	4.2.1.126	-	G	ko:K07106	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
DPAKAGIC_01156	0.0	pts32BC	2.7.1.211	-	G	ko:K02808,ko:K02809,ko:K02810	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
DPAKAGIC_01157	0.0	-	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
DPAKAGIC_01158	0.0	-	-	-	G	ko:K02755,ko:K02756,ko:K02757	ko02060,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
DPAKAGIC_01159	4.37e-205	-	-	-	K	ko:K03488	-	ko00000,ko03000	CAT RNA binding domain
DPAKAGIC_01160	0.0	-	-	-	M	-	-	-	Leucine-rich repeat (LRR) protein
DPAKAGIC_01162	0.0	pulA	3.2.1.41	CBM48,GH13	G	ko:K01200	ko00500,ko01100,ko01110,map00500,map01100,map01110	ko00000,ko00001,ko01000	belongs to the glycosyl hydrolase 13 family
DPAKAGIC_01163	4.05e-119	-	-	-	-	-	-	-	-
DPAKAGIC_01164	6.91e-235	-	-	-	-	-	-	-	-
DPAKAGIC_01165	0.0	-	-	-	S	-	-	-	Uncharacterised protein conserved in bacteria (DUF2326)
DPAKAGIC_01172	1.31e-211	galU	2.7.7.9	-	M	ko:K00963	ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	UTP-glucose-1-phosphate uridylyltransferase
DPAKAGIC_01173	6.89e-280	mnaA	5.1.3.14	-	G	ko:K01791	ko00520,ko01100,ko05111,map00520,map01100,map05111	ko00000,ko00001,ko00002,ko01000,ko01005	Belongs to the UDP-N-acetylglucosamine 2-epimerase family
DPAKAGIC_01174	2.52e-84	-	-	-	L	ko:K07497	-	ko00000	PFAM Integrase catalytic region
DPAKAGIC_01175	1.63e-175	-	-	-	L	ko:K07483	-	ko00000	transposase activity
DPAKAGIC_01176	1.34e-298	-	-	-	L	-	-	-	COG3547 Transposase and inactivated derivatives
DPAKAGIC_01177	0.0	cps1C	-	-	S	ko:K03328	-	ko00000	Membrane protein involved in the export of O-antigen and teichoic acid
DPAKAGIC_01178	7.05e-126	glf	5.4.99.9	-	M	ko:K01854	ko00052,ko00520,map00052,map00520	ko00000,ko00001,ko01000	UDP-galactopyranose mutase
DPAKAGIC_01179	1.31e-93	glf	5.4.99.9	-	M	ko:K01854	ko00052,ko00520,map00052,map00520	ko00000,ko00001,ko01000	Flavin containing amine oxidoreductase
DPAKAGIC_01180	1.86e-287	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 9.99
DPAKAGIC_01181	7.58e-244	XK27_01805	-	-	M	-	-	-	Glycosyltransferase like family 2
DPAKAGIC_01182	4.69e-158	-	-	-	M	-	-	-	transferase activity, transferring glycosyl groups
DPAKAGIC_01184	2.65e-215	-	-	-	S	ko:K07011	-	ko00000	Glycosyltransferase like family 2
DPAKAGIC_01185	4.02e-192	cps3J	-	-	M	-	-	-	Domain of unknown function (DUF4422)
DPAKAGIC_01186	1.77e-159	epsE2	-	-	M	-	-	-	Bacterial sugar transferase
DPAKAGIC_01187	6.17e-191	ywqE	3.1.3.48	-	GM	ko:K01104	-	ko00000,ko01000	PHP domain protein
DPAKAGIC_01188	5.93e-166	ywqD	-	-	D	-	-	-	Capsular exopolysaccharide family
DPAKAGIC_01189	1.01e-193	epsB	-	-	M	-	-	-	biosynthesis protein
DPAKAGIC_01190	5.44e-235	brpA	-	-	K	-	-	-	Cell envelope-like function transcriptional attenuator common domain protein
DPAKAGIC_01191	1.42e-286	hflX	-	-	S	ko:K03665	-	ko00000,ko03009	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
DPAKAGIC_01192	5.52e-241	-	-	-	S	-	-	-	Cysteine-rich secretory protein family
DPAKAGIC_01193	0.0	-	-	-	M	-	-	-	Mycoplasma protein of unknown function, DUF285
DPAKAGIC_01194	1.4e-204	-	-	-	M	ko:K21471	-	ko00000,ko01000,ko01002,ko01011	NlpC/P60 family
DPAKAGIC_01195	2.99e-176	-	-	-	M	ko:K21471	-	ko00000,ko01000,ko01002,ko01011	NlpC P60 family protein
DPAKAGIC_01196	7.09e-125	-	-	-	M	ko:K21471	-	ko00000,ko01000,ko01002,ko01011	NlpC/P60 family
DPAKAGIC_01197	6.94e-110	gmk2	2.7.4.8	-	F	ko:K00942	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko00002,ko01000	Guanylate kinase homologues.
DPAKAGIC_01198	2.96e-56	-	-	-	-	-	-	-	-
DPAKAGIC_01199	0.0	-	-	-	S	-	-	-	O-antigen ligase like membrane protein
DPAKAGIC_01200	4.7e-143	-	-	-	-	-	-	-	-
DPAKAGIC_01201	7.02e-103	nrdI	-	-	F	ko:K03647	-	ko00000	NrdI Flavodoxin like
DPAKAGIC_01202	2.71e-233	nrdF	1.17.4.1	-	F	ko:K00526	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
DPAKAGIC_01203	1.36e-105	-	-	-	-	-	-	-	-
DPAKAGIC_01204	3.7e-175	-	-	-	S	-	-	-	Peptidase_C39 like family
DPAKAGIC_01205	1.47e-70	yitW	-	-	S	-	-	-	Iron-sulfur cluster assembly protein
DPAKAGIC_01206	1.08e-62	sufB	-	-	O	ko:K07033,ko:K09014	-	ko00000	assembly protein SufB
DPAKAGIC_01207	1.64e-47	sufC	-	-	O	ko:K09013	-	ko00000,ko02000	FeS assembly ATPase SufC
DPAKAGIC_01208	4.44e-110	-	-	-	S	-	-	-	Threonine/Serine exporter, ThrE
DPAKAGIC_01209	3.8e-176	-	-	-	S	-	-	-	Putative threonine/serine exporter
DPAKAGIC_01210	0.0	-	-	-	S	-	-	-	ABC transporter
DPAKAGIC_01211	3.08e-81	-	-	-	-	-	-	-	-
DPAKAGIC_01212	2.7e-59	rimL	-	-	J	ko:K03817	-	ko00000,ko01000,ko03009	Acetyltransferase (GNAT) domain
DPAKAGIC_01213	5.01e-293	brpA	-	-	K	-	-	-	Cell envelope-like function transcriptional attenuator common domain protein
DPAKAGIC_01214	0.0	pepF	-	-	E	ko:K08602	-	ko00000,ko01000,ko01002	oligoendopeptidase F
DPAKAGIC_01215	9.86e-59	-	-	-	P	ko:K03449	-	ko00000,ko02000	transmembrane transport
DPAKAGIC_01216	0.0	lctP	-	-	C	ko:K03303	-	ko00000,ko02000	L-lactate permease
DPAKAGIC_01217	1.04e-82	-	-	-	S	ko:K07006	-	ko00000	Pyridoxamine 5'-phosphate oxidase
DPAKAGIC_01218	6.99e-174	znuB	-	-	U	ko:K02075,ko:K09816	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC 3 transport family
DPAKAGIC_01219	6.65e-152	adcC	-	-	P	ko:K02074,ko:K09817,ko:K11710	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter
DPAKAGIC_01220	1.79e-211	-	-	-	P	ko:K02077	-	ko00000,ko00002,ko02000	Belongs to the bacterial solute-binding protein 9 family
DPAKAGIC_01221	7.83e-60	-	-	-	K	ko:K21903	-	ko00000,ko03000	helix_turn_helix, Arsenical Resistance Operon Repressor
DPAKAGIC_01222	3e-98	-	-	-	K	-	-	-	LytTr DNA-binding domain
DPAKAGIC_01223	4.7e-64	-	-	-	S	-	-	-	Protein of unknown function (DUF3021)
DPAKAGIC_01224	0.0	fruA	2.7.1.202	-	GT	ko:K02768,ko:K02769,ko:K02770	ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphotransferase System
DPAKAGIC_01225	1.31e-216	pfkB	2.7.1.56	-	H	ko:K00882	ko00051,map00051	ko00000,ko00001,ko01000	Belongs to the carbohydrate kinase PfkB family. LacC subfamily
DPAKAGIC_01226	3.67e-176	fruR	-	-	K	ko:K03436	-	ko00000,ko03000	DeoR C terminal sensor domain
DPAKAGIC_01227	5.63e-253	-	-	-	S	-	-	-	Fic/DOC family
DPAKAGIC_01228	7.39e-276	natB	-	-	CP	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 family transporter protein
DPAKAGIC_01229	1.6e-214	natA	-	-	S	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
DPAKAGIC_01230	2.89e-12	-	-	-	-	-	-	-	-
DPAKAGIC_01231	4.14e-89	-	-	-	-	-	-	-	-
DPAKAGIC_01232	6.68e-35	-	-	-	-	-	-	-	-
DPAKAGIC_01233	6.32e-42	-	-	-	K	ko:K07727	-	ko00000,ko03000	Transcriptional regulator
DPAKAGIC_01234	9.7e-116	-	-	-	-	-	-	-	-
DPAKAGIC_01235	2.26e-29	-	-	-	-	-	-	-	-
DPAKAGIC_01240	1.21e-275	blpT	-	-	-	-	-	-	-
DPAKAGIC_01241	3.21e-136	mesE	-	-	M	ko:K12293,ko:K20345	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko02000	Transport protein ComB
DPAKAGIC_01242	0.0	comA	-	-	V	ko:K06147,ko:K06148,ko:K12292,ko:K20344	ko02010,ko02020,ko02024,map02010,map02020,map02024	ko00000,ko00001,ko01000,ko02000	ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
DPAKAGIC_01245	3.11e-189	-	-	-	K	ko:K07707	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko02022	LytTr DNA-binding domain
DPAKAGIC_01246	8.09e-298	-	2.7.13.3	-	T	ko:K07706	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	GHKL domain
DPAKAGIC_01247	2e-06	-	-	-	-	-	-	-	-
DPAKAGIC_01250	2.6e-141	-	-	-	-	-	-	-	-
DPAKAGIC_01252	2.71e-136	-	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
DPAKAGIC_01253	5.21e-275	-	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
DPAKAGIC_01254	2.62e-50	-	-	-	S	-	-	-	Enterocin A Immunity
DPAKAGIC_01255	0.0	agl	3.2.1.20	GH31	G	ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 31 family
DPAKAGIC_01256	9.17e-37	-	-	-	-	-	-	-	-
DPAKAGIC_01257	1.47e-45	-	-	-	-	-	-	-	-
DPAKAGIC_01258	1.4e-69	-	-	-	S	-	-	-	Enterocin A Immunity
DPAKAGIC_01259	5.63e-64	-	-	-	S	-	-	-	Enterocin A Immunity
DPAKAGIC_01260	7.79e-186	racD	5.1.1.13	-	M	ko:K01779	ko00250,ko01054,map00250,map01054	ko00000,ko00001,ko01000	Belongs to the aspartate glutamate racemases family
DPAKAGIC_01261	0.0	murE	6.3.2.13, 6.3.2.7	-	M	ko:K01928,ko:K05362	ko00300,ko00550,ko01100,map00300,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
DPAKAGIC_01262	9.58e-267	-	-	-	T	-	-	-	His Kinase A (phosphoacceptor) domain
DPAKAGIC_01263	1.44e-157	vanR	-	-	K	-	-	-	response regulator
DPAKAGIC_01264	0.0	ndvA	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter
DPAKAGIC_01265	0.0	-	-	-	V	ko:K06147,ko:K06148	-	ko00000,ko02000	ABC transporter, ATP-binding protein
DPAKAGIC_01266	1.55e-177	-	-	-	S	-	-	-	Protein of unknown function (DUF1129)
DPAKAGIC_01267	1.39e-256	ychF	-	-	J	ko:K06942	-	ko00000,ko03009	ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
DPAKAGIC_01268	2.22e-59	yyzM	-	-	S	-	-	-	Bacterial protein of unknown function (DUF951)
DPAKAGIC_01269	2.05e-199	spo0J	-	-	K	ko:K03497	-	ko00000,ko03000,ko03036,ko04812	Belongs to the ParB family
DPAKAGIC_01270	4.1e-177	soj	-	-	D	ko:K03496	-	ko00000,ko03036,ko04812	Sporulation initiation inhibitor
DPAKAGIC_01271	2.79e-188	noc	-	-	K	ko:K03497	-	ko00000,ko03000,ko03036,ko04812	Belongs to the ParB family
DPAKAGIC_01272	3.14e-167	rsmG	2.1.1.170	-	J	ko:K03501	-	ko00000,ko01000,ko03009,ko03036	Specifically methylates the N7 position of a guanine in 16S rRNA
DPAKAGIC_01273	8.5e-105	cvpA	-	-	S	-	-	-	Colicin V production protein
DPAKAGIC_01274	6.64e-233	apbE	2.7.1.180	-	H	ko:K03734	-	ko00000,ko01000	Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
DPAKAGIC_01275	9.1e-192	-	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Tyrosine phosphatase family
DPAKAGIC_01276	6.34e-127	azr	1.5.1.36	-	S	ko:K22394	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	NADPH-dependent FMN reductase
DPAKAGIC_01277	4.14e-126	azo1	1.5.1.36, 1.7.1.6	-	S	ko:K03206,ko:K19784,ko:K22393	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	NADPH-dependent FMN reductase
DPAKAGIC_01278	2.15e-144	-	-	-	K	-	-	-	WHG domain
DPAKAGIC_01279	2e-26	-	-	-	-	-	-	-	-
DPAKAGIC_01280	0.0	pepD4	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
DPAKAGIC_01281	3.26e-152	lolD	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
DPAKAGIC_01282	1.43e-231	yxeA	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter permease
DPAKAGIC_01283	1.45e-124	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
DPAKAGIC_01284	9.98e-146	-	-	-	G	-	-	-	phosphoglycerate mutase
DPAKAGIC_01285	1.19e-179	-	-	-	S	ko:K06889	-	ko00000	Alpha/beta hydrolase family
DPAKAGIC_01286	4.33e-185	XK27_08125	-	-	S	ko:K09861	-	ko00000	Belongs to the UPF0246 family
DPAKAGIC_01287	3.44e-153	-	-	-	-	-	-	-	-
DPAKAGIC_01288	3.08e-204	-	-	-	C	-	-	-	Domain of unknown function (DUF4931)
DPAKAGIC_01289	1.71e-282	-	-	-	S	-	-	-	Putative peptidoglycan binding domain
DPAKAGIC_01290	2.13e-36	-	-	-	-	-	-	-	-
DPAKAGIC_01291	0.0	dtpT	-	-	U	ko:K03305	-	ko00000	amino acid peptide transporter
DPAKAGIC_01292	0.0	pepN	3.4.11.2	-	E	ko:K01256	ko00480,ko01100,map00480,map01100	ko00000,ko00001,ko01000,ko01002	aminopeptidase
DPAKAGIC_01293	7.67e-80	lysM	-	-	M	-	-	-	LysM domain
DPAKAGIC_01294	9.68e-226	-	-	-	-	-	-	-	-
DPAKAGIC_01295	3e-133	-	-	-	EGP	-	-	-	Major Facilitator Superfamily
DPAKAGIC_01296	8.59e-148	mdtG2	-	-	EGP	ko:K08161	-	ko00000,ko02000	Transporter, major facilitator family protein
DPAKAGIC_01298	1.97e-280	-	-	-	I	-	-	-	transferase activity, transferring acyl groups other than amino-acyl groups
DPAKAGIC_01299	1.53e-118	ymdB	-	-	S	-	-	-	Macro domain protein
DPAKAGIC_01300	0.0	nisT	-	-	V	ko:K06147,ko:K20485	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko02000	ABC transporter
DPAKAGIC_01303	2.49e-189	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
DPAKAGIC_01304	2.56e-110	-	-	-	-	-	-	-	-
DPAKAGIC_01305	8.05e-197	malG	-	-	P	ko:K15772	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
DPAKAGIC_01306	0.0	malF	-	-	P	ko:K15771	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
DPAKAGIC_01307	1.35e-282	-	-	-	G	ko:K15770	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding protein
DPAKAGIC_01308	6e-268	msmX	-	-	P	ko:K10112	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
DPAKAGIC_01309	1.07e-150	sipS3	3.4.21.89	-	U	ko:K03100	ko02024,ko03060,map02024,map03060	ko00000,ko00001,ko01000,ko01002	Belongs to the peptidase S26 family
DPAKAGIC_01310	0.0	clpE	-	-	O	ko:K03697,ko:K04086	-	ko00000,ko03110	AAA domain (Cdc48 subfamily)
DPAKAGIC_01311	4.24e-217	-	-	-	S	-	-	-	Alpha/beta hydrolase of unknown function (DUF915)
DPAKAGIC_01312	1e-305	pts13C	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
DPAKAGIC_01313	8.01e-162	-	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
DPAKAGIC_01314	0.0	ylbB	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter permease
DPAKAGIC_01315	5.63e-49	-	-	-	-	-	-	-	-
DPAKAGIC_01316	0.0	ytgP	-	-	S	ko:K03328	-	ko00000	Polysaccharide biosynthesis protein
DPAKAGIC_01317	9.26e-222	lysA2	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
DPAKAGIC_01318	9.09e-164	-	-	-	S	-	-	-	Protein of unknown function (DUF975)
DPAKAGIC_01319	2.86e-81	-	-	-	-	-	-	-	-
DPAKAGIC_01320	3.4e-228	pbpX2	-	-	V	-	-	-	Beta-lactamase
DPAKAGIC_01321	6.8e-316	dltD	-	-	M	ko:K03740	ko01503,ko02020,ko05150,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01504	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
DPAKAGIC_01322	2.46e-48	dltC	6.1.1.13	-	J	ko:K14188	ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01000,ko01504	Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
DPAKAGIC_01323	3.35e-310	dltB	-	-	M	ko:K03739	ko01503,ko02020,ko05150,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01504	MBOAT, membrane-bound O-acyltransferase family
DPAKAGIC_01324	0.0	dltA	6.1.1.13	-	H	ko:K03367	ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01000,ko01504	Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
DPAKAGIC_01325	2.17e-25	-	-	-	S	-	-	-	D-Ala-teichoic acid biosynthesis protein
DPAKAGIC_01326	2.18e-53	-	-	-	-	-	-	-	-
DPAKAGIC_01327	8.03e-278	-	-	-	S	-	-	-	Membrane
DPAKAGIC_01328	1.97e-107	ykuL	-	-	S	-	-	-	(CBS) domain
DPAKAGIC_01329	0.0	cadA	-	-	P	-	-	-	P-type ATPase
DPAKAGIC_01330	4.69e-262	napA	-	-	P	-	-	-	Sodium/hydrogen exchanger family
DPAKAGIC_01331	2.82e-105	-	-	-	S	-	-	-	Putative adhesin
DPAKAGIC_01332	0.0	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC transporter transmembrane region
DPAKAGIC_01333	1.57e-197	mutR	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
DPAKAGIC_01334	5.7e-125	-	-	-	M	-	-	-	CHAP domain
DPAKAGIC_01335	1.4e-88	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
DPAKAGIC_01336	2.41e-155	-	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
DPAKAGIC_01337	3.39e-253	-	-	-	S	-	-	-	DUF218 domain
DPAKAGIC_01338	0.0	-	-	-	V	ko:K02003,ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
DPAKAGIC_01339	4.51e-134	-	-	-	S	-	-	-	ECF transporter, substrate-specific component
DPAKAGIC_01340	1.21e-236	tcsA	-	-	S	ko:K02058,ko:K07335	-	ko00000,ko00002,ko02000	ABC transporter substrate-binding protein PnrA-like
DPAKAGIC_01341	9.41e-257	tcsA	-	-	S	ko:K02058,ko:K07335	-	ko00000,ko00002,ko02000	ABC transporter substrate-binding protein PnrA-like
DPAKAGIC_01342	0.0	mglA	3.6.3.17	-	S	ko:K02056,ko:K06400	-	ko00000,ko00002,ko01000,ko02000	ABC transporter
DPAKAGIC_01343	9.19e-266	mglC	-	-	S	ko:K02057	-	ko00000,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
DPAKAGIC_01344	4.74e-217	yufQ	-	-	S	ko:K02057	-	ko00000,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
DPAKAGIC_01345	1.25e-204	-	-	-	S	-	-	-	Aldo/keto reductase family
DPAKAGIC_01346	1.19e-175	nagB	3.5.99.6	-	G	ko:K02564	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
DPAKAGIC_01347	1.63e-152	dak	2.7.1.76	-	F	ko:K10353	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000	deoxynucleoside kinase
DPAKAGIC_01348	6.91e-165	dgk2	2.7.1.76	-	F	ko:K10353	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000	deoxynucleoside kinase
DPAKAGIC_01349	3.03e-187	-	-	-	S	-	-	-	haloacid dehalogenase-like hydrolase
DPAKAGIC_01350	3.53e-294	pbuG	-	-	S	ko:K06901	-	ko00000,ko02000	permease
DPAKAGIC_01351	0.0	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
DPAKAGIC_01352	0.0	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
DPAKAGIC_01353	5.84e-202	oppC5	-	-	P	ko:K02034	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
DPAKAGIC_01354	1.28e-226	oppB	-	-	P	ko:K02033,ko:K02034	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
DPAKAGIC_01355	8.73e-234	oppF	-	-	P	ko:K02032	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
DPAKAGIC_01356	1.43e-251	oppD	-	-	P	ko:K02031,ko:K15583	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
DPAKAGIC_01357	1.53e-47	acpP	-	-	IQ	ko:K02078	-	ko00000,ko00001	Carrier of the growing fatty acid chain in fatty acid biosynthesis
DPAKAGIC_01358	3.16e-234	plsX	2.3.1.15	-	I	ko:K03621	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
DPAKAGIC_01359	0.0	recG	3.6.4.12	-	L	ko:K03655	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
DPAKAGIC_01360	0.0	yloV	-	-	S	ko:K07030	-	ko00000	DAK2 domain fusion protein YloV
DPAKAGIC_01361	1.67e-74	yloU	-	-	S	-	-	-	Asp23 family, cell envelope-related function
DPAKAGIC_01362	2.29e-36	rpmB	-	-	J	ko:K02902	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL28 family
DPAKAGIC_01363	1.5e-68	-	-	-	-	-	-	-	-
DPAKAGIC_01364	3.29e-163	thiN	2.7.6.2	-	H	ko:K00949	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000	thiamine pyrophosphokinase
DPAKAGIC_01365	5.27e-154	rpe	5.1.3.1	-	G	ko:K01783	ko00030,ko00040,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the ribulose-phosphate 3-epimerase family
DPAKAGIC_01366	1.37e-214	rsgA	3.1.3.100	-	S	ko:K06949	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000,ko03009	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
DPAKAGIC_01367	0.0	prkC	2.7.11.1	-	KLT	ko:K08884,ko:K12132	-	ko00000,ko01000,ko01001	serine threonine protein kinase
DPAKAGIC_01368	9.79e-181	stp	3.1.3.16	-	T	ko:K20074	-	ko00000,ko01000,ko01009	phosphatase
DPAKAGIC_01369	4.61e-313	sun	2.1.1.176	-	J	ko:K03500	-	ko00000,ko01000,ko03009	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
DPAKAGIC_01370	1.08e-220	fmt	2.1.2.9	-	J	ko:K00604	ko00670,ko00970,map00670,map00970	ko00000,ko00001,ko01000	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
DPAKAGIC_01371	0.0	priA	-	-	L	ko:K04066	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
DPAKAGIC_01372	2.37e-46	rpoZ	2.7.7.6	-	K	ko:K03060	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
DPAKAGIC_01373	2.53e-146	gmk	2.7.4.8	-	F	ko:K00942	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko00002,ko01000	Essential for recycling GMP and indirectly, cGMP
DPAKAGIC_01374	2.88e-105	-	-	-	S	-	-	-	ASCH
DPAKAGIC_01375	0.0	recN	-	-	L	ko:K03631	-	ko00000,ko03400	May be involved in recombinational repair of damaged DNA
DPAKAGIC_01376	1.52e-198	rrmJ	2.1.1.226, 2.1.1.227	-	J	ko:K06442	-	ko00000,ko01000,ko03009	Ribosomal RNA large subunit methyltransferase J
DPAKAGIC_01377	1.84e-204	ispA	2.5.1.1, 2.5.1.10, 2.5.1.29	-	H	ko:K13789	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko01006	Belongs to the FPP GGPP synthase family
DPAKAGIC_01378	3.76e-48	xseB	3.1.11.6	-	L	ko:K03602	ko03430,map03430	ko00000,ko00001,ko01000,ko03400	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
DPAKAGIC_01379	5.86e-310	xseA	3.1.11.6	-	L	ko:K03601	ko03430,map03430	ko00000,ko00001,ko01000,ko03400	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
DPAKAGIC_01380	5.91e-198	folD	1.5.1.5, 3.5.4.9	-	F	ko:K01491	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
DPAKAGIC_01381	1.28e-85	nusB	-	-	K	ko:K03625	-	ko00000,ko03009,ko03021	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
DPAKAGIC_01382	2.57e-94	WQ51_04310	-	-	S	ko:K10947	-	ko00000,ko03000	Asp23 family, cell envelope-related function
DPAKAGIC_01383	6.05e-133	efp	-	-	J	ko:K02356	-	ko00000,ko03012	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
DPAKAGIC_01384	3.69e-258	pepP	3.4.11.9, 3.4.13.9	-	E	ko:K01262,ko:K01271	-	ko00000,ko01000,ko01002	Creatinase/Prolidase N-terminal domain
DPAKAGIC_01385	7.95e-64	rpmA	-	-	J	ko:K02899	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL27 family
DPAKAGIC_01386	4.8e-66	rplU	-	-	J	ko:K02888	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein binds to 23S rRNA in the presence of protein L20
DPAKAGIC_01387	3.54e-192	-	-	-	S	-	-	-	Uncharacterised 5xTM membrane BCR, YitT family COG1284
DPAKAGIC_01388	0.0	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2325)
DPAKAGIC_01389	3.98e-257	ilvE	2.6.1.42	-	E	ko:K00826	ko00270,ko00280,ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00270,map00280,map00290,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Branched-chain amino acid aminotransferase
DPAKAGIC_01390	4.18e-38	dmpI	5.3.2.6	-	G	ko:K01821	ko00362,ko00621,ko00622,ko01100,ko01120,ko01220,map00362,map00621,map00622,map01100,map01120,map01220	ko00000,ko00001,ko00002,ko01000	Belongs to the 4-oxalocrotonate tautomerase family
DPAKAGIC_01391	4.41e-137	-	-	-	Q	-	-	-	Imidazolonepropionase and related amidohydrolases
DPAKAGIC_01392	9.64e-141	-	-	-	Q	-	-	-	Imidazolonepropionase and related amidohydrolases
DPAKAGIC_01393	7.45e-09	oppA	-	-	E	ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter
DPAKAGIC_01394	9.58e-80	oppA	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter
DPAKAGIC_01395	7.38e-127	oppA	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter
DPAKAGIC_01396	3.88e-196	-	2.7.1.95	-	F	ko:K00897	-	ko00000,ko01000,ko01504	Belongs to the aminoglycoside phosphotransferase family
DPAKAGIC_01397	0.0	-	-	-	S	-	-	-	Predicted membrane protein (DUF2207)
DPAKAGIC_01398	3.04e-198	cinI	-	-	S	ko:K06889	-	ko00000	Serine hydrolase (FSH1)
DPAKAGIC_01399	1.16e-162	-	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
DPAKAGIC_01400	1.75e-95	-	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
DPAKAGIC_01402	4.22e-211	-	-	-	S	-	-	-	Membrane
DPAKAGIC_01403	1.75e-227	lipA	-	-	I	-	-	-	Carboxylesterase family
DPAKAGIC_01404	4.8e-87	yusI	1.20.4.1	-	P	ko:K00537	-	ko00000,ko01000	Belongs to the ArsC family
DPAKAGIC_01405	0.0	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
DPAKAGIC_01406	0.0	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
DPAKAGIC_01407	1.84e-195	supH	-	-	S	-	-	-	haloacid dehalogenase-like hydrolase
DPAKAGIC_01408	1.64e-262	-	-	-	-	-	-	-	-
DPAKAGIC_01409	1.71e-211	-	-	-	-	-	-	-	-
DPAKAGIC_01410	0.0	lacA	3.2.1.23	-	G	ko:K12308	ko00052,map00052	ko00000,ko00001,ko01000	-beta-galactosidase
DPAKAGIC_01411	0.0	-	3.2.1.177	GH31	G	ko:K01811	-	ko00000,ko01000	Belongs to the glycosyl hydrolase 31 family
DPAKAGIC_01412	0.0	-	3.2.1.21, 3.2.1.86	GT1	G	ko:K01223,ko:K05350	ko00010,ko00460,ko00500,ko00940,ko01100,ko01110,map00010,map00460,map00500,map00940,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
DPAKAGIC_01413	7.89e-213	-	2.7.1.85	-	GK	ko:K18673	-	ko00000,ko01000	ROK family
DPAKAGIC_01414	3.58e-262	xylR	-	-	GK	-	-	-	ROK family
DPAKAGIC_01415	4.19e-302	celD	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
DPAKAGIC_01416	9.35e-128	-	-	-	S	-	-	-	Bacterial PH domain
DPAKAGIC_01417	3.5e-22	-	-	-	-	-	-	-	-
DPAKAGIC_01418	1.02e-85	-	-	-	K	-	-	-	sequence-specific DNA binding
DPAKAGIC_01419	2.45e-63	-	-	-	S	-	-	-	Motility quorum-sensing regulator, toxin of MqsA
DPAKAGIC_01420	0.0	pepX	3.4.14.11	-	E	ko:K01281	-	ko00000,ko01000,ko01002	Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
DPAKAGIC_01421	1.67e-104	msrB	1.8.4.12	-	O	ko:K07305	-	ko00000,ko01000	peptide methionine sulfoxide reductase
DPAKAGIC_01422	2.43e-62	-	-	-	-	-	-	-	-
DPAKAGIC_01423	1.74e-192	-	-	-	U	ko:K05340	-	ko00000,ko02000	sugar transport
DPAKAGIC_01424	0.0	-	-	-	-	-	-	-	-
DPAKAGIC_01425	2.73e-07	-	-	-	D	-	-	-	Domain of Unknown Function (DUF1542)
DPAKAGIC_01426	0.0	carB	6.3.5.5	-	F	ko:K01955	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthase
DPAKAGIC_01427	2.85e-267	carA	6.3.5.5	-	F	ko:K01956	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthetase glutamine chain
DPAKAGIC_01428	5.02e-314	pyrC	3.5.2.3	-	F	ko:K01465	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
DPAKAGIC_01429	3.43e-235	pyrB	2.1.3.2	-	F	ko:K00609	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the ATCase OTCase family
DPAKAGIC_01430	1.75e-123	pyrR	2.4.2.9	-	F	ko:K02825	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000,ko03000	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
DPAKAGIC_01431	1.94e-215	pyrD	1.3.1.14, 1.3.98.1	-	F	ko:K00226,ko:K17828	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
DPAKAGIC_01432	7.44e-168	pyrF	4.1.1.23	-	F	ko:K01591	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
DPAKAGIC_01433	2.73e-154	pyrE	2.4.2.10	-	F	ko:K00762	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
DPAKAGIC_01434	3.3e-152	-	-	-	GM	-	-	-	NmrA-like family
DPAKAGIC_01435	0.0	yoaB	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	P-type ATPase
DPAKAGIC_01436	9.28e-317	eriC	-	-	P	ko:K03281	-	ko00000	chloride
DPAKAGIC_01437	1.86e-141	-	-	-	O	-	-	-	Matrixin
DPAKAGIC_01438	0.0	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
DPAKAGIC_01439	3.89e-122	-	-	-	K	-	-	-	acetyltransferase
DPAKAGIC_01440	1.65e-66	-	-	-	-	-	-	-	-
DPAKAGIC_01441	2.34e-204	metQ	-	-	P	ko:K02073	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the nlpA lipoprotein family
DPAKAGIC_01442	2.87e-62	-	-	-	-	-	-	-	-
DPAKAGIC_01443	7.22e-161	-	4.3.1.17	-	E	ko:K01752	ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230	ko00000,ko00001,ko01000	Serine dehydratase beta chain
DPAKAGIC_01444	1.15e-200	sdaAA	4.3.1.17	-	E	ko:K01752	ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230	ko00000,ko00001,ko01000	L-serine dehydratase, iron-sulfur-dependent, alpha subunit
DPAKAGIC_01445	2.66e-68	yitW	-	-	S	-	-	-	Iron-sulfur cluster assembly protein
DPAKAGIC_01446	0.0	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
DPAKAGIC_01448	0.0	npr	1.11.1.1	-	C	ko:K05910	-	ko00000,ko01000	NADH oxidase
DPAKAGIC_01449	7.81e-82	-	-	-	S	-	-	-	Bacterial toxin of type II toxin-antitoxin system, YafQ
DPAKAGIC_01450	3.88e-60	-	-	-	D	ko:K19159	-	ko00000,ko02048	Antitoxin component of a toxin-antitoxin (TA) module
DPAKAGIC_01451	1.77e-150	ylbE	-	-	GM	-	-	-	NAD(P)H-binding
DPAKAGIC_01452	2.97e-76	-	-	-	T	ko:K07171	-	ko00000,ko01000,ko02048	PemK-like, MazF-like toxin of type II toxin-antitoxin system
DPAKAGIC_01453	1.08e-85	-	-	-	S	-	-	-	ASCH domain
DPAKAGIC_01454	6.71e-153	-	-	-	S	-	-	-	GyrI-like small molecule binding domain
DPAKAGIC_01456	1.3e-206	-	-	-	K	-	-	-	Bacterial regulatory helix-turn-helix protein, lysR family
DPAKAGIC_01457	0.0	-	1.3.5.4	-	C	ko:K00244	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	ko00000,ko00001,ko00002,ko01000	FMN_bind
DPAKAGIC_01460	2.26e-267	-	2.7.7.65	-	T	ko:K02488	ko02020,ko04112,map02020,map04112	ko00000,ko00001,ko00002,ko01000,ko02022	GGDEF domain
DPAKAGIC_01461	1.63e-169	-	-	-	T	-	-	-	Putative diguanylate phosphodiesterase
DPAKAGIC_01462	8.74e-192	-	-	-	T	-	-	-	EAL domain
DPAKAGIC_01463	8.31e-313	yijG	-	GT2	M	ko:K11936	ko02026,map02026	ko00000,ko00001,ko01000,ko01003,ko02000	Glycosyl transferase
DPAKAGIC_01464	3.07e-119	-	-	-	-	-	-	-	-
DPAKAGIC_01465	9.37e-227	-	-	-	C	-	-	-	Oxidoreductase
DPAKAGIC_01467	4.69e-271	-	-	-	L	ko:K07496	-	ko00000	TIGRFAM transposase, IS605 OrfB family
DPAKAGIC_01468	4.27e-37	-	-	-	C	-	-	-	pentaerythritol trinitrate reductase activity
DPAKAGIC_01469	4.83e-141	pncA	-	-	Q	-	-	-	Isochorismatase family
DPAKAGIC_01470	2.86e-19	-	-	-	-	-	-	-	-
DPAKAGIC_01471	0.0	potE	-	-	E	-	-	-	Amino Acid
DPAKAGIC_01472	2.05e-163	-	-	-	S	-	-	-	Alpha beta hydrolase
DPAKAGIC_01474	1.31e-165	-	-	-	-	-	-	-	-
DPAKAGIC_01475	5.44e-163	-	-	-	S	-	-	-	L-ascorbic acid biosynthetic process
DPAKAGIC_01476	8.84e-93	-	-	-	O	-	-	-	OsmC-like protein
DPAKAGIC_01477	3.65e-272	-	-	-	EGP	-	-	-	Major Facilitator Superfamily
DPAKAGIC_01478	9.45e-298	sptS	-	-	T	-	-	-	Histidine kinase
DPAKAGIC_01479	1.28e-152	dltr	-	-	K	-	-	-	response regulator
DPAKAGIC_01480	4.2e-147	-	-	-	T	-	-	-	Region found in RelA / SpoT proteins
DPAKAGIC_01481	7.55e-241	dhaK	2.7.1.121	-	G	ko:K05878	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Dak1 domain
DPAKAGIC_01482	1.31e-134	dhaL	2.7.1.121	-	S	ko:K05879	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Dak2
DPAKAGIC_01483	8.2e-81	dhaM	2.7.1.121	-	S	ko:K05881	ko00561,map00561	ko00000,ko00001,ko01000,ko02000	PTS system fructose IIA component
DPAKAGIC_01484	1.63e-171	glpF	-	-	U	ko:K02440	-	ko00000,ko02000	Belongs to the MIP aquaporin (TC 1.A.8) family
DPAKAGIC_01485	0.0	gtfA	2.4.1.7	GH13	G	ko:K00690	ko00500,map00500	ko00000,ko00001,ko01000	Sucrose glucosyltransferase
DPAKAGIC_01486	0.0	melA	3.2.1.22	-	G	ko:K07407	ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603	ko00000,ko00001,ko01000	alpha-galactosidase
DPAKAGIC_01487	3.33e-266	msmX	-	-	P	ko:K10112	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
DPAKAGIC_01488	3.56e-196	-	-	-	P	ko:K10119	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
DPAKAGIC_01489	1.98e-200	msmF	-	-	P	ko:K10118	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
DPAKAGIC_01490	6.26e-309	msmE	-	-	G	ko:K10117	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding protein
DPAKAGIC_01491	7.27e-206	lacR	-	-	K	-	-	-	helix_turn_helix, arabinose operon control protein
DPAKAGIC_01492	2.78e-98	-	-	-	K	-	-	-	MerR HTH family regulatory protein
DPAKAGIC_01493	0.0	ycnB	-	-	U	-	-	-	Belongs to the major facilitator superfamily
DPAKAGIC_01494	4.02e-124	-	-	-	S	-	-	-	Domain of unknown function (DUF4811)
DPAKAGIC_01495	9.46e-67	-	-	-	S	-	-	-	Domain of unknown function (DUF4160)
DPAKAGIC_01496	1.53e-61	-	-	-	-	-	-	-	-
DPAKAGIC_01498	3.46e-53	-	-	-	C	-	-	-	FMN binding
DPAKAGIC_01499	1.42e-215	-	-	-	S	-	-	-	SLAP domain
DPAKAGIC_01500	6.76e-247	galM	5.1.3.3	-	G	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the interconversion of alpha and beta anomers of maltose
DPAKAGIC_01501	0.0	galT	2.7.7.12	-	G	ko:K00965	ko00052,ko00520,ko01100,ko04917,map00052,map00520,map01100,map04917	ko00000,ko00001,ko00002,ko01000	UDP-glucose--hexose-1-phosphate uridylyltransferase
DPAKAGIC_01502	7.5e-283	galK	2.7.1.6	-	F	ko:K00849	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
DPAKAGIC_01503	9.91e-241	-	-	-	M	-	-	-	domain protein
DPAKAGIC_01504	1.51e-145	-	-	-	-	-	-	-	-
DPAKAGIC_01505	0.0	lacZ	3.2.1.23	-	G	ko:K12308	ko00052,map00052	ko00000,ko00001,ko01000	-beta-galactosidase
DPAKAGIC_01506	0.0	lacS	-	-	G	ko:K11104,ko:K16209	-	ko00000,ko02000	Transporter
DPAKAGIC_01507	0.0	-	-	-	G	-	-	-	isomerase
DPAKAGIC_01508	1.11e-210	rbsK	2.7.1.15	-	H	ko:K00852	ko00030,map00030	ko00000,ko00001,ko01000	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
DPAKAGIC_01509	1.43e-87	rbsD	5.4.99.62	-	G	ko:K06726	ko02010,map02010	ko00000,ko00001,ko01000	Catalyzes the interconversion of beta-pyran and beta- furan forms of D-ribose
DPAKAGIC_01510	0.0	rbsA	3.6.3.17	-	G	ko:K10441	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter
DPAKAGIC_01511	2.7e-10	rbsC	-	-	U	ko:K10440	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
DPAKAGIC_01512	8.27e-190	rbsC	-	-	U	ko:K10440	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
DPAKAGIC_01513	1.05e-225	-	-	-	G	ko:K10439	ko02010,ko02030,map02010,map02030	ko00000,ko00001,ko00002,ko02000	Periplasmic binding protein domain
DPAKAGIC_01514	0.0	-	-	-	G	-	-	-	Protein of unknown function (DUF4038)
DPAKAGIC_01515	5.47e-199	-	-	-	K	ko:K03488	-	ko00000,ko03000	CAT RNA binding domain
DPAKAGIC_01516	0.0	-	-	-	G	ko:K02755,ko:K02756,ko:K02757	ko02060,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
DPAKAGIC_01517	4.63e-225	-	-	-	I	-	-	-	alpha/beta hydrolase fold
DPAKAGIC_01518	9.97e-103	-	3.5.1.105	-	G	ko:K03478	-	ko00000,ko01000	YdjC-like protein
DPAKAGIC_01519	2.29e-166	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
DPAKAGIC_01520	4.08e-289	pbuG	-	-	S	ko:K06901	-	ko00000,ko02000	permease
DPAKAGIC_01521	3.14e-226	pepL	3.4.11.5	-	E	ko:K01259	ko00330,map00330	ko00000,ko00001,ko01000,ko01002	Releases the N-terminal proline from various substrates
DPAKAGIC_01522	0.0	oppA	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding proteins, family 5 Middle
DPAKAGIC_01523	8.03e-289	pbuG	-	-	S	ko:K06901	-	ko00000,ko02000	permease
DPAKAGIC_01524	2.47e-32	-	-	-	-	-	-	-	-
DPAKAGIC_01525	0.0	oppA	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
DPAKAGIC_01526	6.78e-100	atkY	-	-	K	ko:K02171	ko01501,map01501	ko00000,ko00001,ko00002,ko01504,ko03000	Penicillinase repressor
DPAKAGIC_01527	1.77e-85	-	-	-	S	-	-	-	Cupredoxin-like domain
DPAKAGIC_01528	1.09e-65	-	-	-	S	-	-	-	Cupredoxin-like domain
DPAKAGIC_01529	0.0	copA	3.6.3.3, 3.6.3.5, 3.6.3.54	-	P	ko:K01534,ko:K17686	ko01524,ko04016,map01524,map04016	ko00000,ko00001,ko01000	P-type ATPase
DPAKAGIC_01530	2.91e-234	-	-	-	S	-	-	-	DUF218 domain
DPAKAGIC_01531	6.11e-168	-	-	-	S	-	-	-	Mitochondrial biogenesis AIM24
DPAKAGIC_01532	6.65e-153	crp2	-	-	K	ko:K10914,ko:K21562	ko02020,ko02024,ko02025,ko02026,ko05111,map02020,map02024,map02025,map02026,map05111	ko00000,ko00001,ko03000	helix_turn_helix, cAMP Regulatory protein
DPAKAGIC_01533	1.78e-26	-	-	-	-	-	-	-	-
DPAKAGIC_01534	5.17e-273	-	-	-	-	-	-	-	-
DPAKAGIC_01535	0.0	eriC	-	-	P	ko:K03281	-	ko00000	chloride
DPAKAGIC_01536	0.0	gnd	1.1.1.343, 1.1.1.44	-	H	ko:K00033	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
DPAKAGIC_01537	0.0	pox1	1.2.3.3	-	EH	ko:K00158	ko00620,ko01100,map00620,map01100	ko00000,ko00001,ko01000	Belongs to the TPP enzyme family
DPAKAGIC_01538	0.0	gidA	-	-	D	ko:K03495	-	ko00000,ko03016,ko03036	NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
DPAKAGIC_01539	0.0	mnmE	-	-	S	ko:K03650	-	ko00000,ko01000,ko03016	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
DPAKAGIC_01540	2.31e-199	yidC	-	-	U	ko:K03217	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044,ko03029	Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
DPAKAGIC_01541	1.87e-81	rnpA	3.1.26.5	-	J	ko:K03536	-	ko00000,ko01000,ko03016	RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
DPAKAGIC_01542	3.26e-23	rpmH	-	-	J	ko:K02914	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL34 family
DPAKAGIC_01543	0.0	dnaA	-	-	L	ko:K02313	ko02020,ko04112,map02020,map04112	ko00000,ko00001,ko03032,ko03036	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
DPAKAGIC_01544	1.46e-263	dnaN	2.7.7.7	-	L	ko:K02338	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
DPAKAGIC_01545	6.15e-47	yaaA	-	-	S	ko:K14761	-	ko00000,ko03009	S4 domain protein YaaA
DPAKAGIC_01546	3.1e-269	recF	-	-	L	ko:K03629	ko03440,map03440	ko00000,ko00001,ko03400	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
DPAKAGIC_01547	0.0	gyrB	5.99.1.3	-	L	ko:K02470	-	ko00000,ko01000,ko03032,ko03400	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
DPAKAGIC_01548	0.0	gyrA	5.99.1.3	-	L	ko:K02469	-	ko00000,ko01000,ko03032,ko03400	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
DPAKAGIC_01549	9.55e-66	rpsF	-	-	J	ko:K02990	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Binds together with S18 to 16S ribosomal RNA
DPAKAGIC_01550	8.43e-110	ssb	-	-	L	ko:K03111	ko03030,ko03430,ko03440,map03030,map03430,map03440	ko00000,ko00001,ko03029,ko03032,ko03400	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
DPAKAGIC_01551	1.89e-47	rpsR	-	-	J	ko:K02963	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
DPAKAGIC_01552	0.0	yybT	-	-	T	-	-	-	signaling protein consisting of a modified GGDEF domain and a DHH domain
DPAKAGIC_01553	6.96e-100	rplI	-	-	J	ko:K02939	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to the 23S rRNA
DPAKAGIC_01554	0.0	dnaB	3.6.4.12	-	L	ko:K02314	ko03030,ko04112,map03030,map04112	ko00000,ko00001,ko01000,ko03032	Participates in initiation and elongation during chromosome replication
DPAKAGIC_01555	1e-220	phnD	-	-	P	ko:K02044	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter, phosphonate, periplasmic substrate-binding protein
DPAKAGIC_01556	1.38e-225	degV1	-	-	S	-	-	-	DegV family
DPAKAGIC_01557	1.09e-215	scrK	2.7.1.4	-	GK	ko:K00847	ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100	ko00000,ko00001,ko01000	ROK family
DPAKAGIC_01558	1.38e-33	-	-	-	S	-	-	-	CsbD-like
DPAKAGIC_01559	1.47e-41	-	-	-	S	-	-	-	Transglycosylase associated protein
DPAKAGIC_01560	1.25e-303	-	-	-	I	-	-	-	Protein of unknown function (DUF2974)
DPAKAGIC_01562	7.47e-133	cadD	-	-	P	-	-	-	Cadmium resistance transporter
DPAKAGIC_01563	2.41e-77	-	-	-	K	ko:K21903	-	ko00000,ko03000	helix_turn_helix, Arsenical Resistance Operon Repressor
DPAKAGIC_01564	2.93e-235	-	-	-	-	-	-	-	-
DPAKAGIC_01565	1.08e-71	-	-	-	-	-	-	-	-
DPAKAGIC_01566	7.23e-264	-	-	-	D	-	-	-	COG1674 DNA segregation ATPase FtsK SpoIIIE and related proteins
DPAKAGIC_01567	4.15e-120	-	-	-	-	-	-	-	-
DPAKAGIC_01568	1.16e-234	-	-	-	EP	-	-	-	Plasmid replication protein
DPAKAGIC_01569	1.45e-42	-	-	-	-	-	-	-	-
DPAKAGIC_01570	8.39e-299	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
DPAKAGIC_01571	4.37e-43	-	-	-	-	-	-	-	-
DPAKAGIC_01572	4.41e-92	doc	-	-	S	ko:K07341	-	ko00000,ko02048	Fic/DOC family
DPAKAGIC_01573	1.63e-27	-	-	-	S	-	-	-	Protein of unknown function (DUF3923)
DPAKAGIC_01576	2.01e-205	-	2.3.1.81	-	V	ko:K00662	-	ko00000,ko01000,ko01504	Aminoglycoside 3-N-acetyltransferase
DPAKAGIC_01577	0.0	-	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
DPAKAGIC_01578	1.5e-295	-	-	-	S	-	-	-	LPXTG cell wall anchor motif
DPAKAGIC_01579	1.4e-196	-	-	-	S	-	-	-	Putative ABC-transporter type IV
DPAKAGIC_01580	2.37e-129	-	-	-	S	-	-	-	Cob(I)alamin adenosyltransferase
DPAKAGIC_01581	6.12e-112	-	-	-	S	ko:K16927	-	ko00000,ko00002,ko02000	ECF transporter, substrate-specific component
DPAKAGIC_01582	9.95e-75	-	-	-	S	-	-	-	Domain of unknown function (DUF4430)
DPAKAGIC_01583	0.0	rtpR	1.17.4.2	-	F	ko:K00527	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000	ribonucleoside-triphosphate reductase activity
DPAKAGIC_01584	2e-223	ydbI	-	-	K	-	-	-	AI-2E family transporter
DPAKAGIC_01585	2.37e-135	-	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase
DPAKAGIC_01586	9.67e-22	-	-	-	-	-	-	-	-
DPAKAGIC_01587	2.79e-313	-	-	-	G	ko:K16211	-	ko00000,ko02000	Major Facilitator
DPAKAGIC_01588	6.35e-69	-	-	-	-	-	-	-	-
DPAKAGIC_01589	8.29e-174	XK27_08845	-	-	S	ko:K05833	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
DPAKAGIC_01590	3.51e-170	XK27_08840	-	-	U	ko:K05832	-	ko00000,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
DPAKAGIC_01591	3.82e-229	ABC-SBP	-	-	S	ko:K01989	-	ko00000,ko00002,ko02000	ABC transporter
DPAKAGIC_01592	1.29e-178	ysaA	3.1.3.5, 3.8.1.2	-	S	ko:K01560,ko:K07025,ko:K08723	ko00230,ko00240,ko00361,ko00625,ko00760,ko01100,ko01110,ko01120,map00230,map00240,map00361,map00625,map00760,map01100,map01110,map01120	ko00000,ko00001,ko01000	Haloacid dehalogenase-like hydrolase
DPAKAGIC_01593	0.0	fusA1	-	-	J	-	-	-	elongation factor G
DPAKAGIC_01594	1.99e-195	-	3.1.3.102, 3.1.3.104	-	S	ko:K20861	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	hydrolase
DPAKAGIC_01595	9.66e-41	-	-	-	S	-	-	-	endonuclease exonuclease phosphatase family protein
DPAKAGIC_01596	1.63e-172	-	-	-	S	-	-	-	endonuclease exonuclease phosphatase family protein
DPAKAGIC_01597	5.27e-247	ldhA	1.1.1.28	-	C	ko:K03778,ko:K18347	ko00620,ko01120,ko01502,ko02020,map00620,map01120,map01502,map02020	ko00000,ko00001,ko00002,ko01000,ko01504	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
DPAKAGIC_01598	3.08e-205	xth	3.1.11.2	-	L	ko:K01142	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	exodeoxyribonuclease III
DPAKAGIC_01599	0.0	-	-	-	E	ko:K20265	ko02024,map02024	ko00000,ko00001,ko02000	amino acid
DPAKAGIC_01600	0.0	-	-	-	L	-	-	-	Helicase C-terminal domain protein
DPAKAGIC_01601	3.12e-273	pbpX1	-	-	V	-	-	-	Beta-lactamase
DPAKAGIC_01602	6.19e-94	def2	3.5.1.88	-	J	ko:K01462	-	ko00000,ko01000	Removes the formyl group from the N-terminal Met of newly synthesized proteins
DPAKAGIC_01603	4.65e-193	yumC	1.18.1.2, 1.19.1.1	-	C	ko:K21567	-	ko00000,ko01000	Ferredoxin--NADP reductase
DPAKAGIC_01604	1.45e-151	dedA	-	-	S	ko:K03975	-	ko00000	SNARE-like domain protein
DPAKAGIC_01605	3.19e-139	-	-	-	S	-	-	-	Protein of unknown function (DUF1461)
DPAKAGIC_01606	1.9e-186	nagD	3.1.3.41	-	G	ko:K01101	ko00627,ko01120,map00627,map01120	ko00000,ko00001,ko01000	Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
DPAKAGIC_01607	6.99e-134	yutD	-	-	S	-	-	-	Protein of unknown function (DUF1027)
DPAKAGIC_01608	0.0	sasH	3.1.3.5, 3.1.3.6, 3.1.4.16, 3.6.1.45	-	F	ko:K01081,ko:K01119,ko:K07004,ko:K08693,ko:K11751	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the 5'-nucleotidase family
DPAKAGIC_01609	2.5e-74	-	-	-	-	-	-	-	-
DPAKAGIC_01610	0.0	-	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	glycerophosphoryl diester phosphodiesterase
DPAKAGIC_01611	4.5e-234	ccpA	-	-	K	ko:K02529	-	ko00000,ko03000	catabolite control protein A
DPAKAGIC_01612	4.1e-275	pepQ	3.4.13.9	-	E	ko:K01271	-	ko00000,ko01000,ko01002	Creatinase/Prolidase N-terminal domain
DPAKAGIC_01613	1.37e-74	-	-	-	-	-	-	-	-
DPAKAGIC_01614	2.09e-23	ytxG	-	-	S	-	-	-	protein containing a divergent version of the methyl-accepting chemotaxis-like domain
DPAKAGIC_01615	3.18e-165	ykuT	-	-	M	ko:K16052,ko:K22044	-	ko00000,ko02000	mechanosensitive ion channel
DPAKAGIC_01616	1.42e-143	rdgB	3.6.1.66	-	F	ko:K02428	ko00230,map00230	ko00000,ko00001,ko01000	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
DPAKAGIC_01617	1.33e-186	murI	3.6.1.66, 5.1.1.3	-	M	ko:K01776,ko:K02428	ko00230,ko00471,ko01100,map00230,map00471,map01100	ko00000,ko00001,ko01000,ko01011	Provides the (R)-glutamate required for cell wall biosynthesis
DPAKAGIC_01618	2.57e-91	yslB	-	-	S	-	-	-	Protein of unknown function (DUF2507)
DPAKAGIC_01619	1.46e-70	mscL	-	-	M	ko:K03282	-	ko00000,ko02000	Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
DPAKAGIC_01620	1.54e-71	trxA	-	-	O	ko:K03671	ko04621,ko05418,map04621,map05418	ko00000,ko00001,ko03110	Belongs to the thioredoxin family
DPAKAGIC_01621	0.0	mutS2	-	-	L	ko:K07456	ko03430,map03430	ko00000,ko00001,ko03400	Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
DPAKAGIC_01622	2.03e-67	yrzB	-	-	S	-	-	-	Belongs to the UPF0473 family
DPAKAGIC_01623	3.27e-96	yrrK	-	-	J	ko:K07447	-	ko00000,ko01000	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
DPAKAGIC_01624	5.32e-57	yrzL	-	-	S	-	-	-	Belongs to the UPF0297 family
DPAKAGIC_01625	0.0	alaS	6.1.1.7	-	J	ko:K01872	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
DPAKAGIC_01626	8.26e-316	cshB	3.6.4.13	-	JKL	ko:K05592,ko:K18692	ko03018,map03018	ko00000,ko00001,ko01000,ko03009,ko03019	DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
DPAKAGIC_01627	9.43e-233	nrnA	3.1.13.3, 3.1.3.7	-	S	ko:K06881	ko00920,ko01100,ko01120,map00920,map01100,map01120	ko00000,ko00001,ko01000,ko03400	DHHA1 domain protein
DPAKAGIC_01628	1.32e-255	dinB	2.7.7.7	-	L	ko:K02346	-	ko00000,ko01000,ko03400	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
DPAKAGIC_01629	0.0	zwf	1.1.1.363, 1.1.1.49	-	G	ko:K00036	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,ko05230,map00030,map00480,map01100,map01110,map01120,map01130,map01200,map05230	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
DPAKAGIC_01630	2.41e-83	yajC	-	-	U	ko:K03210	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Preprotein translocase
DPAKAGIC_01631	1.61e-239	ruvB	3.6.4.12	-	L	ko:K03551	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
DPAKAGIC_01632	2.35e-133	ruvA	3.6.4.12	-	L	ko:K03550	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
DPAKAGIC_01633	0.0	mutL	-	-	L	ko:K03572	ko03430,map03430	ko00000,ko00001,ko03400	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
DPAKAGIC_01634	0.0	mutS	-	-	L	ko:K03555	ko03430,map03430	ko00000,ko00001,ko03400	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
DPAKAGIC_01635	0.0	groL	-	-	O	ko:K04077	ko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
DPAKAGIC_01636	2.22e-60	groS	-	-	O	ko:K04078	-	ko00000,ko03029,ko03110	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
DPAKAGIC_01637	2.29e-175	-	-	-	S	-	-	-	membrane
DPAKAGIC_01638	1.33e-100	-	-	-	K	-	-	-	LytTr DNA-binding domain
DPAKAGIC_01639	4.92e-107	-	-	-	-	-	-	-	-
DPAKAGIC_01640	0.0	scrA	2.7.1.211	-	G	ko:K02808,ko:K02809,ko:K02810	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
DPAKAGIC_01641	0.0	scrB	3.2.1.26	GH32	G	ko:K01193	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	invertase
DPAKAGIC_01642	6.41e-236	scrR	-	-	K	ko:K03484	-	ko00000,ko03000	helix_turn _helix lactose operon repressor
DPAKAGIC_01643	1.24e-145	rex	-	-	K	ko:K01926	-	ko00000,ko03000	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
DPAKAGIC_01644	0.0	ydiF	-	-	S	ko:K06158	-	ko00000,ko03012	ABC transporter, ATP-binding protein
DPAKAGIC_01645	0.0	spxB	1.2.3.3, 1.2.5.1, 2.2.1.6, 4.1.1.8	-	EH	ko:K00156,ko:K00158,ko:K01577,ko:K01652	ko00290,ko00620,ko00630,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00620,map00630,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the TPP enzyme family
DPAKAGIC_01646	0.0	frc	2.8.3.16	-	C	ko:K07749	-	ko00000,ko01000	Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
DPAKAGIC_01647	1.38e-298	bbsF_1	2.8.3.19	-	C	ko:K18702	-	ko00000,ko01000	Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
DPAKAGIC_01648	4.46e-165	frlR1	-	-	K	ko:K03710,ko:K10711	-	ko00000,ko03000	UTRA
DPAKAGIC_01649	7.2e-235	-	-	-	S	-	-	-	Oxidoreductase family, NAD-binding Rossmann fold
DPAKAGIC_01650	9.05e-170	deoC	4.1.2.4	-	F	ko:K01619	ko00030,map00030	ko00000,ko00001,ko01000	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
DPAKAGIC_01651	5.62e-252	tsaD	2.3.1.234	-	J	ko:K01409	-	ko00000,ko01000,ko03016	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
DPAKAGIC_01652	1.49e-138	rimI	2.3.1.128	-	K	ko:K03789	-	ko00000,ko01000,ko03009	Ribosomal-protein-alanine acetyltransferase
DPAKAGIC_01653	8.02e-172	yeaZ	2.3.1.234	-	O	ko:K01409,ko:K14742	-	ko00000,ko01000,ko03016	Universal bacterial protein YeaZ
DPAKAGIC_01654	6.76e-114	-	-	-	S	-	-	-	ECF transporter, substrate-specific component
DPAKAGIC_01655	1.29e-182	fat	3.1.2.21	-	I	ko:K01071	ko00061,ko01100,map00061,map01100	ko00000,ko00001,ko01000,ko01004	Acyl-ACP thioesterase
DPAKAGIC_01656	9.46e-200	rsmI	2.1.1.198	-	H	ko:K07056	-	ko00000,ko01000,ko03009	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
DPAKAGIC_01657	2.65e-80	yabA	-	-	L	-	-	-	Involved in initiation control of chromosome replication
DPAKAGIC_01658	5.91e-199	holB	2.7.7.7	-	L	ko:K02341	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III
DPAKAGIC_01659	1.85e-69	yaaQ	-	-	S	-	-	-	Cyclic-di-AMP receptor
DPAKAGIC_01660	1.69e-150	tmk	2.7.4.9	-	F	ko:K00943	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
DPAKAGIC_01661	1.18e-46	-	-	-	S	-	-	-	Protein of unknown function (DUF2508)
DPAKAGIC_01662	4.56e-142	recR	-	-	L	ko:K06187	ko03440,map03440	ko00000,ko00001,ko03400	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
DPAKAGIC_01663	2.2e-68	yaaK	-	-	S	ko:K09747	-	ko00000	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
DPAKAGIC_01664	2.83e-62	-	-	-	-	-	-	-	-
DPAKAGIC_01665	1.3e-99	-	3.6.4.12	-	K	ko:K03655	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Putative ATP-dependent DNA helicase recG C-terminal
DPAKAGIC_01666	1.51e-234	prs2	2.7.6.1	-	F	ko:K00948	ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
DPAKAGIC_01667	1.19e-160	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
DPAKAGIC_01668	2.93e-173	-	-	-	-	-	-	-	-
DPAKAGIC_01669	0.0	glnPH2	-	-	P	ko:K02029,ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter permease
DPAKAGIC_01670	7.42e-173	glnQ	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
DPAKAGIC_01671	1.96e-293	-	-	-	S	-	-	-	Cysteine-rich secretory protein family
DPAKAGIC_01672	7.25e-265	ddl	6.3.2.4	-	F	ko:K01921	ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Belongs to the D-alanine--D-alanine ligase family
DPAKAGIC_01673	1.49e-136	-	-	-	-	-	-	-	-
DPAKAGIC_01674	9.78e-258	yibE	-	-	S	-	-	-	overlaps another CDS with the same product name
DPAKAGIC_01675	1.71e-170	yibF	-	-	S	-	-	-	overlaps another CDS with the same product name
DPAKAGIC_01676	7.56e-205	-	-	-	I	-	-	-	alpha/beta hydrolase fold
DPAKAGIC_01677	0.0	-	-	-	G	-	-	-	Belongs to the glycosyl hydrolase 31 family
DPAKAGIC_01678	8.53e-292	nagA	3.5.1.25	-	G	ko:K01443	ko00520,ko01130,map00520,map01130	ko00000,ko00001,ko01000	Belongs to the metallo-dependent hydrolases superfamily. NagA family
DPAKAGIC_01679	2.9e-116	ntd	2.4.2.6	-	F	ko:K08728	ko00240,map00240	ko00000,ko00001,ko01000	Nucleoside
DPAKAGIC_01680	1.74e-112	-	2.7.1.200, 2.7.1.204	-	G	ko:K02773,ko:K20112	ko00052,ko01100,ko02060,map00052,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
DPAKAGIC_01681	8.74e-192	-	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Tyrosine phosphatase family
DPAKAGIC_01682	3.95e-113	usp5	-	-	T	-	-	-	universal stress protein
DPAKAGIC_01683	7.56e-214	phnD	-	-	P	ko:K02044	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Phosphonate ABC transporter
DPAKAGIC_01684	4.46e-180	phnC	3.6.3.28	-	P	ko:K02041	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
DPAKAGIC_01685	2.84e-171	phnB	-	-	P	ko:K02042	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
DPAKAGIC_01686	6.38e-191	-	-	-	P	ko:K02042	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
DPAKAGIC_01687	7.66e-141	tag	3.2.2.20	-	L	ko:K01246	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	glycosylase
DPAKAGIC_01688	3.65e-109	-	-	-	-	-	-	-	-
DPAKAGIC_01689	0.0	-	-	-	S	-	-	-	Calcineurin-like phosphoesterase
DPAKAGIC_01690	0.0	asnB	6.3.5.4	-	E	ko:K01953	ko00250,ko01100,ko01110,map00250,map01100,map01110	ko00000,ko00001,ko01000,ko01002	Asparagine synthase
DPAKAGIC_01691	0.0	yxbA	6.3.1.12	-	S	ko:K17810	-	ko00000,ko01000	ATP-grasp enzyme
DPAKAGIC_01692	0.0	nrdD	1.1.98.6	-	F	ko:K21636	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Ribonucleoside-triphosphate reductase
DPAKAGIC_01693	1.29e-178	nrdG	1.97.1.4	-	O	ko:K04068	-	ko00000,ko01000	Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
DPAKAGIC_01694	1.6e-127	yitW	-	-	S	-	-	-	Iron-sulfur cluster assembly protein
DPAKAGIC_01695	4.3e-297	XK27_04775	-	-	S	ko:K09155	-	ko00000	PAS domain
DPAKAGIC_01696	1.88e-292	yttB	-	-	EGP	-	-	-	Major Facilitator
DPAKAGIC_01697	0.0	pepO	-	-	O	ko:K07386	-	ko00000,ko01000,ko01002	Peptidase family M13
DPAKAGIC_01698	0.0	kup	-	-	P	ko:K03549	-	ko00000,ko02000	Transport of potassium into the cell
DPAKAGIC_01699	6.3e-91	-	-	-	-	-	-	-	-
DPAKAGIC_01700	2.15e-21	-	-	-	-	-	-	-	-
DPAKAGIC_01701	3.76e-289	-	-	-	S	-	-	-	SLAP domain
DPAKAGIC_01702	4.97e-81	-	4.1.2.50, 4.2.3.12	-	H	ko:K01737	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000,ko03016	6-pyruvoyl tetrahydropterin synthase
DPAKAGIC_01703	0.0	icaA	-	-	M	-	-	-	Glycosyl transferase family group 2
DPAKAGIC_01704	2.3e-229	-	-	-	-	-	-	-	-
DPAKAGIC_01705	8.52e-304	-	-	-	S	-	-	-	SLAP domain
DPAKAGIC_01706	2.53e-283	-	-	-	NU	-	-	-	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
DPAKAGIC_01707	7.59e-269	-	3.2.1.96, 3.5.1.28	GH73	M	ko:K01227,ko:K01447,ko:K13714,ko:K13731	ko00511,ko05100,map00511,map05100	ko00000,ko00001,ko01000	N-acetylmuramoyl-L-alanine amidase
DPAKAGIC_01708	0.0	yjbQ	-	-	P	ko:K03455,ko:K03499	-	ko00000,ko02000	TrkA C-terminal domain protein
DPAKAGIC_01709	6.61e-230	-	-	-	S	-	-	-	Oxidoreductase family, NAD-binding Rossmann fold
DPAKAGIC_01710	4.62e-181	-	-	-	-	-	-	-	-
DPAKAGIC_01711	2.12e-176	-	-	-	-	-	-	-	-
DPAKAGIC_01712	1.84e-170	gpmA	5.4.2.11	-	G	ko:K01834	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
DPAKAGIC_01713	8.51e-143	pcp	3.4.19.3	-	O	ko:K01304	-	ko00000,ko01000,ko01002	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
DPAKAGIC_01714	1.96e-132	-	-	-	G	-	-	-	Aldose 1-epimerase
DPAKAGIC_01715	1.34e-259	brpA	-	-	K	-	-	-	Cell envelope-like function transcriptional attenuator common domain protein
DPAKAGIC_01716	2.73e-146	plsY1	2.3.1.15	-	I	ko:K08591	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
DPAKAGIC_01717	0.0	XK27_08315	-	-	M	-	-	-	Sulfatase
DPAKAGIC_01718	0.0	-	-	-	S	-	-	-	Fibronectin type III domain
DPAKAGIC_01719	6.28e-310	tyrS	6.1.1.1	-	J	ko:K01866	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
DPAKAGIC_01720	1.02e-74	-	-	-	-	-	-	-	-
DPAKAGIC_01722	0.0	pepC1	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	aminopeptidase
DPAKAGIC_01723	1.16e-162	ypgQ	-	-	S	ko:K06950	-	ko00000	Metal dependent phosphohydrolases with conserved 'HD' motif.
DPAKAGIC_01724	0.0	oppA	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
DPAKAGIC_01725	0.0	oppA	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
DPAKAGIC_01726	8.86e-267	guaB	1.1.1.205	-	F	ko:K00088	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
DPAKAGIC_01727	5.46e-191	oppB	-	-	P	ko:K15581	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC-type dipeptide oligopeptide nickel transport systems, permease components
DPAKAGIC_01728	1.92e-240	oppC	-	-	EP	ko:K15582	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC-type dipeptide oligopeptide nickel transport systems, permease components
DPAKAGIC_01729	1.9e-256	oppD	-	-	P	ko:K02031,ko:K15583	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
DPAKAGIC_01730	1.87e-221	oppF	-	-	P	ko:K10823	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
DPAKAGIC_01731	0.0	pepE	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	aminopeptidase
DPAKAGIC_01732	1.5e-96	hsp	-	-	O	ko:K13993	ko04141,map04141	ko00000,ko00001,ko03110	Belongs to the small heat shock protein (HSP20) family
DPAKAGIC_01733	6.92e-101	greA	-	-	K	ko:K03624	-	ko00000,ko03021	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
DPAKAGIC_01734	1.09e-148	-	-	-	-	-	-	-	-
DPAKAGIC_01736	1.21e-146	-	-	-	E	-	-	-	Belongs to the SOS response-associated peptidase family
DPAKAGIC_01737	2.35e-244	trpS	6.1.1.2	-	J	ko:K01867	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-I aminoacyl-tRNA synthetase family
DPAKAGIC_01738	2.69e-119	comEB	3.5.4.12	-	F	ko:K01493	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko02044	MafB19-like deaminase
DPAKAGIC_01739	1.25e-142	-	-	-	S	ko:K06872	-	ko00000	TPM domain
DPAKAGIC_01740	0.0	mgtA	3.6.3.2	-	P	ko:K01531	-	ko00000,ko01000	COG0474 Cation transport ATPase
DPAKAGIC_01741	0.0	metG	6.1.1.10	-	J	ko:K01874	ko00450,ko00970,map00450,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
DPAKAGIC_01742	2.33e-190	tatD	-	-	L	ko:K03424	-	ko00000,ko01000	hydrolase, TatD family
DPAKAGIC_01743	1.63e-124	rnmV	3.1.26.8	-	J	ko:K05985	-	ko00000,ko01000	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
DPAKAGIC_01744	4.9e-207	ksgA	2.1.1.182	-	J	ko:K02528	-	ko00000,ko01000,ko03009	Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
DPAKAGIC_01745	9.99e-53	veg	-	-	S	-	-	-	Biofilm formation stimulator VEG
DPAKAGIC_01746	4.31e-192	purR	-	-	F	ko:K09685	-	ko00000,ko03000	pur operon repressor
DPAKAGIC_01747	0.0	glmU	2.3.1.157, 2.7.7.23	-	M	ko:K04042	ko00520,ko01100,ko01130,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
DPAKAGIC_01748	1.4e-116	-	-	-	S	-	-	-	SLAP domain
DPAKAGIC_01749	4.55e-117	-	-	-	S	-	-	-	SLAP domain
DPAKAGIC_01750	1.48e-114	-	-	-	-	-	-	-	-
DPAKAGIC_01751	0.0	-	-	-	S	-	-	-	SLAP domain
DPAKAGIC_01752	6.58e-227	prs	2.7.6.1	-	F	ko:K00948	ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
DPAKAGIC_01753	0.0	-	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
DPAKAGIC_01754	3.82e-167	yecA	-	-	K	-	-	-	Helix-turn-helix domain, rpiR family
DPAKAGIC_01755	0.0	-	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
DPAKAGIC_01756	4.58e-216	-	-	-	GK	-	-	-	ROK family
DPAKAGIC_01757	4.88e-59	-	-	-	-	-	-	-	-
DPAKAGIC_01758	0.0	-	-	-	S	ko:K06885	-	ko00000	Metal dependent phosphohydrolases with conserved 'HD' motif.
DPAKAGIC_01759	4.39e-88	-	-	-	S	-	-	-	Domain of unknown function (DUF1934)
DPAKAGIC_01760	1.11e-96	rpoE	-	-	K	ko:K03048	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko03021,ko03400	Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
DPAKAGIC_01761	0.0	pyrG	6.3.4.2	-	F	ko:K01937	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
DPAKAGIC_01762	6.32e-311	murA	2.5.1.7	-	M	ko:K00790	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
DPAKAGIC_01763	4.42e-142	pepDA	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
DPAKAGIC_01764	1.59e-205	pepDA	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
DPAKAGIC_01765	7.87e-207	msmR	-	-	K	-	-	-	AraC-like ligand binding domain
DPAKAGIC_01766	8.61e-139	ybbB	-	-	S	-	-	-	Protein of unknown function (DUF1211)
DPAKAGIC_01767	1.21e-285	pbuX	-	-	F	ko:K03458,ko:K16169	-	ko00000,ko02000	xanthine permease
DPAKAGIC_01768	5.8e-137	xpt	2.4.2.22	-	F	ko:K03816	ko00230,ko01100,ko01110,map00230,map01100,map01110	ko00000,ko00001,ko01000	Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
DPAKAGIC_01769	1.04e-173	-	-	-	K	-	-	-	DNA-binding helix-turn-helix protein
DPAKAGIC_01770	3.77e-220	-	-	-	K	-	-	-	Helix-turn-helix
DPAKAGIC_01771	0.0	guaA	6.3.5.2	-	F	ko:K01951	ko00230,ko00983,ko01100,map00230,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko01002	Catalyzes the synthesis of GMP from XMP
DPAKAGIC_01772	7.77e-199	-	-	-	V	ko:K11050	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
DPAKAGIC_01773	3.12e-191	cylB	-	-	V	ko:K11051	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC-2 type transporter
DPAKAGIC_01774	1.03e-96	-	-	-	K	-	-	-	LytTr DNA-binding domain
DPAKAGIC_01775	1.16e-63	-	-	-	S	-	-	-	Protein of unknown function (DUF3021)
DPAKAGIC_01776	7.88e-116	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
DPAKAGIC_01777	9.09e-173	XK27_07210	-	-	S	-	-	-	B3 4 domain
DPAKAGIC_01778	2.07e-117	-	-	-	P	-	-	-	Belongs to the major facilitator superfamily
DPAKAGIC_01779	2.89e-44	-	-	-	P	-	-	-	Belongs to the major facilitator superfamily
DPAKAGIC_01780	5.49e-42	-	-	-	-	-	-	-	-
DPAKAGIC_01781	3.18e-106	ogt	2.1.1.63	-	L	ko:K00567,ko:K13531	-	ko00000,ko01000,ko03400	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
DPAKAGIC_01782	6.74e-39	-	-	-	K	ko:K12410	-	ko00000,ko01000	NAD+ binding
DPAKAGIC_01783	4.62e-13	-	-	-	P	-	-	-	Voltage gated chloride channel
DPAKAGIC_01784	7.47e-126	-	-	-	-	-	-	-	-
DPAKAGIC_01785	8.2e-68	-	-	-	-	-	-	-	-
DPAKAGIC_01786	4.88e-59	-	-	-	-	-	-	-	-
DPAKAGIC_01787	9.39e-296	glyA	2.1.2.1	-	E	ko:K00600	ko00260,ko00460,ko00630,ko00670,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko01523,map00260,map00460,map00630,map00670,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map01523	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
DPAKAGIC_01788	0.0	-	-	-	E	-	-	-	amino acid
DPAKAGIC_01789	9.8e-204	supH	3.1.3.102, 3.1.3.104, 3.1.3.23	-	G	ko:K07757,ko:K20861	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Sucrose-6F-phosphate phosphohydrolase
DPAKAGIC_01790	0.0	dexB	3.2.1.70	-	G	ko:K01215	-	ko00000,ko01000	Alpha amylase, catalytic domain protein
DPAKAGIC_01791	5.28e-53	rpmE	-	-	J	ko:K02909	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L31
DPAKAGIC_01792	0.0	murF	6.3.2.10	-	M	ko:K01929	ko00300,ko00550,ko01100,ko01502,map00300,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
DPAKAGIC_01793	0.0	cshA	3.6.4.13	-	F	ko:K05592	ko03018,map03018	ko00000,ko00001,ko01000,ko03009,ko03019	DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
DPAKAGIC_01794	3.27e-80	acpS	2.7.8.7	-	I	ko:K00997	ko00770,map00770	ko00000,ko00001,ko01000	Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
DPAKAGIC_01795	1.62e-276	alr	5.1.1.1, 5.1.1.5	-	E	ko:K01775,ko:K20707	ko00473,ko01100,ko01502,map00473,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
DPAKAGIC_01796	1.23e-166	-	-	-	S	-	-	-	(CBS) domain
DPAKAGIC_01797	1.98e-232	ldh	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	Belongs to the LDH MDH superfamily. LDH family
DPAKAGIC_01798	6.58e-135	pth	3.1.1.29	-	J	ko:K01056	-	ko00000,ko01000,ko03012	The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
DPAKAGIC_01799	0.0	mfd	-	-	L	ko:K03723	ko03420,map03420	ko00000,ko00001,ko01000,ko03400	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
DPAKAGIC_01800	1.79e-46	yabO	-	-	J	-	-	-	S4 domain protein
DPAKAGIC_01801	1.03e-75	divIC	-	-	D	ko:K13052	-	ko00000,ko03036	Septum formation initiator
DPAKAGIC_01802	3.95e-82	-	-	-	J	ko:K07571	-	ko00000	S1 RNA binding domain
DPAKAGIC_01803	5.11e-307	tilS	2.4.2.8, 6.3.4.19	-	J	ko:K04075,ko:K15780	ko00230,ko01100,ko01110,map00230,map01100,map01110	ko00000,ko00001,ko01000,ko03016	Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
DPAKAGIC_01804	0.0	ftsH	-	-	O	ko:K03798	-	ko00000,ko00002,ko01000,ko01002,ko03110	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
DPAKAGIC_01805	6.77e-215	hslO	-	-	O	ko:K04083	-	ko00000,ko03110	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
DPAKAGIC_01806	3.5e-249	dus	-	-	J	ko:K05540	-	ko00000,ko01000,ko03016	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
DPAKAGIC_01807	0.0	lysS	6.1.1.6	-	J	ko:K04567	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-II aminoacyl-tRNA synthetase family
DPAKAGIC_01811	1.16e-107	ytsP	1.8.4.14	-	T	ko:K08968	ko00270,map00270	ko00000,ko00001,ko01000	GAF domain-containing protein
DPAKAGIC_01812	0.0	clpC	-	-	O	ko:K03696	ko01100,map01100	ko00000,ko03110	Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
DPAKAGIC_01813	0.0	rpoB	2.7.7.6	-	K	ko:K03043	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
DPAKAGIC_01814	0.0	rpoC	2.7.7.6	-	K	ko:K03046	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
DPAKAGIC_01815	6.6e-159	comC	3.4.23.43	-	NOU	ko:K02236	-	ko00000,ko00002,ko01000,ko02044	Bacterial Peptidase A24 N-terminal domain
DPAKAGIC_01816	2.09e-91	rpsL	-	-	J	ko:K02950	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
DPAKAGIC_01817	6.89e-107	rpsG	-	-	J	ko:K02992	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
DPAKAGIC_01818	0.0	fusA	-	-	J	ko:K02355	-	ko00000,ko03012,ko03029	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
DPAKAGIC_01819	6.34e-66	rpsJ	-	-	J	ko:K02946	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Involved in the binding of tRNA to the ribosomes
DPAKAGIC_01820	6.64e-146	rplC	-	-	J	ko:K02906	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
DPAKAGIC_01821	1.91e-137	rplD	-	-	J	ko:K02926	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the polypeptide exit tunnel
DPAKAGIC_01822	3.57e-62	rplW	-	-	J	ko:K02892	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
DPAKAGIC_01823	9.85e-199	rplB	-	-	J	ko:K02886	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
DPAKAGIC_01824	1.34e-61	rpsS	-	-	J	ko:K02965	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
DPAKAGIC_01825	9.07e-73	rplV	-	-	J	ko:K02890	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
DPAKAGIC_01826	7.15e-156	rpsC	-	-	J	ko:K02982	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
DPAKAGIC_01827	9.64e-100	rplP	-	-	J	ko:K02878	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
DPAKAGIC_01828	1.45e-34	rpmC	-	-	J	ko:K02904	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uL29 family
DPAKAGIC_01829	1.1e-55	rpsQ	-	-	J	ko:K02961	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
DPAKAGIC_01830	3.62e-79	rplN	-	-	J	ko:K02874	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
DPAKAGIC_01831	6.92e-45	rplX	-	-	J	ko:K02895	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
DPAKAGIC_01832	1.23e-123	rplE	-	-	J	ko:K02931	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
DPAKAGIC_01833	1e-39	rpsN	-	-	J	ko:K02954	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
DPAKAGIC_01834	2.28e-89	rpsH	-	-	J	ko:K02994	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
DPAKAGIC_01835	2.5e-121	rplF	-	-	J	ko:K02933	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
DPAKAGIC_01836	4.84e-73	rplR	-	-	J	ko:K02881	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
DPAKAGIC_01837	5.3e-110	rpsE	-	-	J	ko:K02988	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
DPAKAGIC_01838	1.1e-34	rpmD	-	-	J	ko:K02907	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L30
DPAKAGIC_01839	2.45e-93	rplO	-	-	J	ko:K02876	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to the 23S rRNA
DPAKAGIC_01840	3.59e-301	secY	-	-	U	ko:K03076	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
DPAKAGIC_01841	1.29e-155	adk	2.7.4.3	-	F	ko:K00939	ko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
DPAKAGIC_01842	3.13e-46	infA	-	-	J	ko:K02518	-	ko00000,ko03012	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
DPAKAGIC_01843	4.63e-22	rpmJ	-	-	J	ko:K02919	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL36 family
DPAKAGIC_01844	2.07e-73	rpsM	-	-	J	ko:K02952	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
DPAKAGIC_01845	3.95e-82	rpsK	-	-	J	ko:K02948	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
DPAKAGIC_01846	2.55e-218	rpoA	2.7.7.6	-	K	ko:K03040	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
DPAKAGIC_01847	1.57e-80	rplQ	-	-	J	ko:K02879	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L17
DPAKAGIC_01848	4.16e-198	ecfA1	-	-	P	ko:K16786	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
DPAKAGIC_01849	4.04e-206	ecfA2	-	-	P	ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
DPAKAGIC_01850	1.74e-181	ecfT	-	-	U	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
DPAKAGIC_01851	4.17e-192	truA	5.4.99.12	-	J	ko:K06173	-	ko00000,ko01000,ko03016	Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
DPAKAGIC_01852	1.6e-103	rplM	-	-	J	ko:K02871	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
DPAKAGIC_01853	8.28e-87	rpsI	-	-	J	ko:K02996	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uS9 family
DPAKAGIC_01854	7.71e-255	-	-	-	L	-	-	-	Phage integrase family
DPAKAGIC_01855	4.24e-37	-	-	-	-	-	-	-	-
DPAKAGIC_01856	1.31e-270	-	-	-	EP	-	-	-	Plasmid replication protein
DPAKAGIC_01857	1.77e-61	-	-	-	-	-	-	-	-
DPAKAGIC_01858	2.52e-264	-	-	-	D	-	-	-	COG1674 DNA segregation ATPase FtsK SpoIIIE and related proteins
DPAKAGIC_01859	1.48e-69	-	-	-	-	-	-	-	-
DPAKAGIC_01861	0.0	yeeA	-	-	V	-	-	-	Type II restriction enzyme, methylase subunits
DPAKAGIC_01862	1.53e-85	-	-	-	S	-	-	-	YjcQ protein
DPAKAGIC_01864	5.27e-16	-	-	-	-	-	-	-	-
DPAKAGIC_01865	3.63e-141	-	3.5.1.124	-	S	ko:K03152	-	ko00000,ko01000,ko01002	DJ-1/PfpI family
DPAKAGIC_01866	4.67e-154	-	3.8.1.2	-	S	ko:K01560,ko:K07025	ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120	ko00000,ko00001,ko01000	Haloacid dehalogenase-like hydrolase
DPAKAGIC_01867	8.09e-160	-	-	-	S	ko:K07090	-	ko00000	membrane transporter protein
DPAKAGIC_01868	6.91e-164	-	-	-	G	-	-	-	Belongs to the phosphoglycerate mutase family
DPAKAGIC_01869	5.3e-209	-	-	-	P	ko:K16264	-	ko00000,ko02000	cation diffusion facilitator family transporter
DPAKAGIC_01870	1.14e-27	-	-	-	-	-	-	-	-
DPAKAGIC_01871	1.27e-104	gpmA1	5.4.2.11	-	G	ko:K01834	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
DPAKAGIC_01872	9.84e-236	-	-	-	S	-	-	-	AAA domain
DPAKAGIC_01873	0.0	pepC	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	Peptidase C1-like family
DPAKAGIC_01874	9.95e-70	-	-	-	-	-	-	-	-
DPAKAGIC_01875	1.82e-131	dut	3.6.1.23	-	F	ko:K01520	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	dUTP diphosphatase
DPAKAGIC_01876	0.0	radA	-	-	O	ko:K04485	-	ko00000,ko03400	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
DPAKAGIC_01877	0.0	gltX	6.1.1.24	-	J	ko:K09698	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
DPAKAGIC_01878	0.0	cysS	6.1.1.16	-	J	ko:K01883	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-I aminoacyl-tRNA synthetase family
DPAKAGIC_01879	6.01e-99	mrnC	-	-	J	ko:K11145	-	ko00000,ko01000,ko03009	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
DPAKAGIC_01880	4.31e-179	trmH	2.1.1.185	-	J	ko:K03218	-	ko00000,ko01000,ko03009	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
DPAKAGIC_01881	2.91e-121	comX	-	-	K	ko:K03088,ko:K03091,ko:K12296	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko03000,ko03021	Belongs to the sigma-70 factor family
DPAKAGIC_01882	2.41e-45	-	-	-	-	-	-	-	-
DPAKAGIC_01883	6.48e-148	-	-	-	-	-	-	-	-
DPAKAGIC_01884	0.0	gntK	2.7.1.12	-	G	ko:K00851	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko01000	Belongs to the FGGY kinase family
DPAKAGIC_01885	1.22e-220	-	-	-	K	-	-	-	helix_turn_helix, arabinose operon control protein
DPAKAGIC_01886	0.0	dxs	2.2.1.7	-	H	ko:K01662	ko00730,ko00900,ko01100,ko01110,ko01130,map00730,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
DPAKAGIC_01887	1.72e-33	secE	-	-	U	ko:K03073	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
DPAKAGIC_01888	3.66e-132	nusG	-	-	K	ko:K02601	-	ko00000,ko03009,ko03021	Participates in transcription elongation, termination and antitermination
DPAKAGIC_01889	2.69e-90	rplK	-	-	J	ko:K02867	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
DPAKAGIC_01890	1.5e-160	rplA	-	-	J	ko:K02863	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
DPAKAGIC_01891	2.83e-203	pstS	-	-	P	ko:K02040	ko02010,ko02020,ko05152,map02010,map02020,map05152	ko00000,ko00001,ko00002,ko02000	Phosphate
DPAKAGIC_01892	1.8e-223	pstC	-	-	P	ko:K02037	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	probably responsible for the translocation of the substrate across the membrane
DPAKAGIC_01893	4.47e-199	pstA	-	-	P	ko:K02038	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Phosphate transport system permease protein PstA
DPAKAGIC_01894	4.47e-186	pstB2	3.6.3.27	-	P	ko:K02036	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
DPAKAGIC_01895	5.67e-180	pstB1	3.6.3.27	-	P	ko:K02036	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
DPAKAGIC_01896	1.74e-152	phoU	-	-	P	ko:K02039	-	ko00000	Plays a role in the regulation of phosphate uptake
DPAKAGIC_01897	3.62e-268	ywkB	-	-	S	ko:K07088	-	ko00000	Membrane transport protein
DPAKAGIC_01898	1.86e-38	-	-	-	-	-	-	-	-
DPAKAGIC_01899	2.15e-110	rplJ	-	-	J	ko:K02864	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
DPAKAGIC_01900	9.31e-72	rplL	-	-	J	ko:K02935	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
DPAKAGIC_01901	3.83e-167	-	2.1.1.172	-	J	ko:K00564,ko:K10716	-	ko00000,ko01000,ko02000,ko03009	Ion channel
DPAKAGIC_01902	1.25e-147	rsmC	2.1.1.172	-	J	ko:K00564	-	ko00000,ko01000,ko03009	Methyltransferase
DPAKAGIC_01903	4.9e-33	-	-	-	-	-	-	-	-
DPAKAGIC_01904	9.21e-120	tadA	3.5.4.33	-	F	ko:K11991	-	ko00000,ko01000,ko03016	Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
DPAKAGIC_01905	0.0	dnaX	2.7.7.7	-	L	ko:K02343	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity