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ORF_ID	e_value	Gene_name	EC_number	CAZy	COGs	KEGG_ko	KEGG_Pathway	BRITE	Description
PAMFEDIP_00001	4.26e-308	npr	1.11.1.1	-	C	ko:K05910	-	ko00000,ko01000	NADH oxidase
PAMFEDIP_00002	0.0	-	-	-	-	-	-	-	-
PAMFEDIP_00003	1.65e-80	-	-	-	-	-	-	-	-
PAMFEDIP_00004	1.94e-247	-	-	-	S	-	-	-	Fn3-like domain
PAMFEDIP_00005	2.82e-138	-	-	-	S	-	-	-	WxL domain surface cell wall-binding
PAMFEDIP_00006	5.76e-135	-	-	-	S	-	-	-	WxL domain surface cell wall-binding
PAMFEDIP_00007	1.78e-153	draG	-	-	O	-	-	-	ADP-ribosylglycohydrolase
PAMFEDIP_00008	1.09e-196	prsA	5.2.1.8	-	M	ko:K01802,ko:K07533	-	ko00000,ko01000,ko03110	Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
PAMFEDIP_00009	6.76e-73	-	-	-	-	-	-	-	-
PAMFEDIP_00010	3.6e-106	hit	-	-	FG	ko:K02503	-	ko00000,ko04147	histidine triad
PAMFEDIP_00011	1.1e-174	ecsA	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PAMFEDIP_00012	8.17e-285	ecsB	-	-	U	ko:K01992	-	ko00000,ko00002,ko02000	ABC transporter
PAMFEDIP_00013	7.24e-197	ytmP	-	-	M	-	-	-	Choline/ethanolamine kinase
PAMFEDIP_00014	2.8e-155	trmB	2.1.1.33	-	J	ko:K03439	-	ko00000,ko01000,ko03016	Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
PAMFEDIP_00015	2.94e-71	ytzB	-	-	S	-	-	-	Peptidase propeptide and YPEB domain
PAMFEDIP_00016	1.29e-148	ytpR	-	-	J	ko:K06878	-	ko00000	Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PAMFEDIP_00017	0.0	sftA	-	-	D	ko:K03466	-	ko00000,ko03036	Belongs to the FtsK SpoIIIE SftA family
PAMFEDIP_00018	0.0	murC	6.3.2.8	-	M	ko:K01924	ko00471,ko00550,ko01100,map00471,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Belongs to the MurCDEF family
PAMFEDIP_00019	3.04e-29	-	-	-	S	-	-	-	Virus attachment protein p12 family
PAMFEDIP_00020	0.0	feoB	-	-	P	ko:K04759	-	ko00000,ko02000	transporter of a GTP-driven Fe(2 ) uptake system
PAMFEDIP_00021	2.87e-47	feoA	-	-	P	ko:K04758	-	ko00000,ko02000	FeoA domain
PAMFEDIP_00022	1.1e-184	sufC	-	-	O	ko:K09013	-	ko00000,ko02000	FeS assembly ATPase SufC
PAMFEDIP_00023	5.21e-311	sufD	-	-	O	ko:K07033,ko:K09015	-	ko00000	FeS assembly protein SufD
PAMFEDIP_00024	1.11e-299	sufS	2.8.1.7, 4.4.1.16	-	E	ko:K11717	ko00450,ko01100,map00450,map01100	ko00000,ko00001,ko01000	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
PAMFEDIP_00025	0.0	sufB	-	-	O	ko:K07033,ko:K09014	-	ko00000	assembly protein SufB
PAMFEDIP_00026	4.07e-60	-	-	-	S	-	-	-	Iron-sulfur cluster assembly protein
PAMFEDIP_00027	1.04e-141	-	-	-	K	ko:K20480	ko02024,map02024	ko00000,ko00001,ko03000	Helix-turn-helix
PAMFEDIP_00028	8.51e-155	ybhL	-	-	S	ko:K06890	-	ko00000	Belongs to the BI1 family
PAMFEDIP_00029	0.0	polA	2.7.7.7	-	L	ko:K02335	ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440	ko00000,ko00001,ko01000,ko03032,ko03400	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
PAMFEDIP_00030	3.19e-202	fpg	3.2.2.23, 4.2.99.18	-	L	ko:K10563	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
PAMFEDIP_00031	1.92e-133	coaE	2.7.1.24	-	F	ko:K00859	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
PAMFEDIP_00032	1.58e-117	nrdR	-	-	K	ko:K07738	-	ko00000,ko03000	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
PAMFEDIP_00033	0.0	dnaB	-	-	L	ko:K03346	-	ko00000,ko03032	replication initiation and membrane attachment
PAMFEDIP_00034	3.5e-220	dnaI	-	-	L	ko:K11144	-	ko00000,ko03032	Primosomal protein DnaI
PAMFEDIP_00035	0.0	thrS	6.1.1.3	-	J	ko:K01868	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
PAMFEDIP_00036	2.37e-109	infC	-	-	J	ko:K02520	-	ko00000,ko03012,ko03029	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
PAMFEDIP_00037	6.92e-37	rpmI	-	-	J	ko:K02916	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL35 family
PAMFEDIP_00038	6.88e-73	rplT	-	-	J	ko:K02887	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
PAMFEDIP_00039	4.59e-73	-	-	-	-	-	-	-	-
PAMFEDIP_00040	7.03e-307	-	-	-	L	ko:K07478	-	ko00000	AAA C-terminal domain
PAMFEDIP_00041	1.18e-250	qor	1.1.1.1, 1.6.5.5	-	C	ko:K00001,ko:K00344	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily
PAMFEDIP_00042	1.64e-83	ydeP	-	-	K	-	-	-	Transcriptional regulator, HxlR family
PAMFEDIP_00043	3.97e-174	racD	5.1.1.13	-	G	ko:K01779	ko00250,ko01054,map00250,map01054	ko00000,ko00001,ko01000	Belongs to the aspartate glutamate racemases family
PAMFEDIP_00044	2.27e-297	yijG	-	GT2	M	ko:K11936	ko02026,map02026	ko00000,ko00001,ko01000,ko01003,ko02000	Glycosyl transferase
PAMFEDIP_00045	6.32e-114	-	-	-	-	-	-	-	-
PAMFEDIP_00046	5.7e-127	yqeG	-	-	S	ko:K07015	-	ko00000	HAD phosphatase, family IIIA
PAMFEDIP_00047	3.81e-276	yqeH	-	-	S	ko:K06948	-	ko00000,ko03009	Ribosome biogenesis GTPase YqeH
PAMFEDIP_00048	2.19e-67	yhbY	-	-	J	ko:K07574	-	ko00000,ko03009	RNA-binding protein
PAMFEDIP_00049	4.19e-153	nadD	2.7.7.18	-	H	ko:K00969	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
PAMFEDIP_00050	1.71e-149	yqeK	-	-	H	-	-	-	Hydrolase, HD family
PAMFEDIP_00051	1.06e-76	rsfS	-	-	J	ko:K09710	-	ko00000,ko03009	Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
PAMFEDIP_00052	3.3e-180	yqeM	-	-	Q	-	-	-	Methyltransferase
PAMFEDIP_00053	3.04e-280	ylbM	-	-	S	-	-	-	Belongs to the UPF0348 family
PAMFEDIP_00054	3.66e-127	ylbN	-	-	S	ko:K07040	-	ko00000	Uncharacterized ACR, COG1399
PAMFEDIP_00055	3.06e-124	-	-	-	S	-	-	-	Peptidase propeptide and YPEB domain
PAMFEDIP_00056	1.09e-223	yeaB	-	-	P	-	-	-	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
PAMFEDIP_00057	0.0	gnd	1.1.1.343, 1.1.1.44	-	H	ko:K00033	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
PAMFEDIP_00058	2.56e-310	rarA	-	-	L	ko:K07478	-	ko00000	recombination factor protein RarA
PAMFEDIP_00059	1.38e-155	csrR	-	-	K	-	-	-	response regulator
PAMFEDIP_00060	0.0	arlS	2.7.13.3	-	T	ko:K18940	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
PAMFEDIP_00061	1.93e-218	ubiA	2.5.1.74	-	H	ko:K02548	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01006	1,4-dihydroxy-2-naphthoate
PAMFEDIP_00062	0.0	sbcC	-	-	L	ko:K03546	-	ko00000,ko03400	Putative exonuclease SbcCD, C subunit
PAMFEDIP_00063	1.36e-288	sbcD	-	-	L	ko:K03547	-	ko00000,ko03400	SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity
PAMFEDIP_00064	4.18e-121	-	-	-	S	-	-	-	SdpI/YhfL protein family
PAMFEDIP_00065	6.94e-209	yidC	-	-	U	ko:K03217	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044,ko03029	Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PAMFEDIP_00066	1.37e-59	acyP	3.6.1.7	-	C	ko:K01512	ko00620,ko00627,ko01120,map00620,map00627,map01120	ko00000,ko00001,ko01000	Belongs to the acylphosphatase family
PAMFEDIP_00067	4.46e-179	spoU	-	-	J	ko:K03437	-	ko00000,ko03016	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PAMFEDIP_00068	1.72e-120	XK27_09705	-	-	S	ko:K06950	-	ko00000	Metal dependent phosphohydrolases with conserved 'HD' motif.
PAMFEDIP_00069	2.58e-82	yodB	-	-	K	-	-	-	Transcriptional regulator, HxlR family
PAMFEDIP_00070	6.88e-257	pheS	6.1.1.20	-	J	ko:K01889	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
PAMFEDIP_00071	0.0	pheT	6.1.1.20	-	J	ko:K01890	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PAMFEDIP_00072	6.11e-249	mltG	-	-	S	ko:K07082	-	ko00000	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
PAMFEDIP_00073	7.5e-146	udk	2.7.1.48	-	F	ko:K00876	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	Cytidine monophosphokinase
PAMFEDIP_00074	1.09e-105	greA	-	-	K	ko:K03624	-	ko00000,ko03021	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PAMFEDIP_00075	9.72e-146	-	-	-	S	-	-	-	membrane
PAMFEDIP_00076	5.72e-99	-	-	-	K	-	-	-	LytTr DNA-binding domain
PAMFEDIP_00077	6.12e-72	yneR	-	-	S	-	-	-	Belongs to the HesB IscA family
PAMFEDIP_00078	0.0	-	-	-	S	-	-	-	membrane
PAMFEDIP_00079	0.0	pbp2b	-	-	M	ko:K00687,ko:K12553,ko:K21465,ko:K21466	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01011	Penicillin-binding Protein
PAMFEDIP_00080	5.33e-30	rpmG	-	-	J	ko:K02913	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL33 family
PAMFEDIP_00081	9.29e-132	fthC	6.3.3.2	-	H	ko:K01934	ko00670,ko01100,map00670,map01100	ko00000,ko00001,ko01000	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
PAMFEDIP_00082	3.52e-153	gluP	3.4.21.105	-	S	ko:K19225	-	ko00000,ko01000,ko01002	Peptidase, S54 family
PAMFEDIP_00083	6.33e-46	yqgQ	-	-	S	-	-	-	Bacterial protein of unknown function (DUF910)
PAMFEDIP_00084	2.6e-231	glcK	2.7.1.2	-	G	ko:K00845	ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Glucokinase
PAMFEDIP_00085	1.62e-141	pepE	3.4.13.21	-	E	ko:K05995	-	ko00000,ko01000,ko01002	Belongs to the peptidase S51 family
PAMFEDIP_00086	1.15e-89	yqhL	-	-	P	-	-	-	Rhodanese-like protein
PAMFEDIP_00087	1.44e-31	WQ51_02665	-	-	S	-	-	-	Protein of unknown function (DUF3042)
PAMFEDIP_00088	7.77e-179	glpQ	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	phosphodiesterase
PAMFEDIP_00089	3.8e-224	miaA	2.5.1.75	-	F	ko:K00791	ko00908,ko01100,ko01110,map00908,map01100,map01110	ko00000,ko00001,ko01000,ko01006,ko03016	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
PAMFEDIP_00090	7.79e-85	glnR	-	-	K	ko:K03713,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000,ko03000	Transcriptional regulator
PAMFEDIP_00091	0.0	glnA	6.3.1.2	-	E	ko:K01915	ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727	ko00000,ko00001,ko01000,ko04147	glutamine synthetase
PAMFEDIP_00092	1.18e-205	-	-	-	-	-	-	-	-
PAMFEDIP_00093	1.34e-232	-	-	-	-	-	-	-	-
PAMFEDIP_00094	2.92e-126	-	-	-	S	-	-	-	Protein conserved in bacteria
PAMFEDIP_00095	3.11e-73	-	-	-	-	-	-	-	-
PAMFEDIP_00096	2.97e-41	-	-	-	-	-	-	-	-
PAMFEDIP_00099	9.81e-27	-	-	-	-	-	-	-	-
PAMFEDIP_00100	8.15e-125	-	-	-	K	-	-	-	Transcriptional regulator
PAMFEDIP_00101	1.55e-66	rplU	-	-	J	ko:K02888	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein binds to 23S rRNA in the presence of protein L20
PAMFEDIP_00102	7.97e-71	ysxB	-	-	J	ko:K07584	-	ko00000	Cysteine protease Prp
PAMFEDIP_00103	2.33e-61	rpmA	-	-	J	ko:K02899	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL27 family
PAMFEDIP_00104	4.08e-247	pepP	3.4.11.9, 3.4.13.9	-	E	ko:K01262,ko:K01271	-	ko00000,ko01000,ko01002	Creatinase/Prolidase N-terminal domain
PAMFEDIP_00105	1.43e-129	efp	-	-	J	ko:K02356	-	ko00000,ko03012	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
PAMFEDIP_00106	1.7e-96	WQ51_04310	-	-	S	ko:K10947	-	ko00000,ko03000	Asp23 family, cell envelope-related function
PAMFEDIP_00107	2.82e-91	nusB	-	-	K	ko:K03625	-	ko00000,ko03009,ko03021	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
PAMFEDIP_00108	4.82e-194	folD	1.5.1.5, 3.5.4.9	-	F	ko:K01491	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
PAMFEDIP_00109	3.28e-312	xseA	3.1.11.6	-	L	ko:K03601	ko03430,map03430	ko00000,ko00001,ko01000,ko03400	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PAMFEDIP_00110	7.55e-44	xseB	3.1.11.6	-	L	ko:K03602	ko03430,map03430	ko00000,ko00001,ko01000,ko03400	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PAMFEDIP_00111	7.16e-201	ispA	2.5.1.1, 2.5.1.10, 2.5.1.29	-	H	ko:K13789	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko01006	Belongs to the FPP GGPP synthase family
PAMFEDIP_00112	4.49e-192	rrmJ	2.1.1.226, 2.1.1.227	-	J	ko:K06442	-	ko00000,ko01000,ko03009	Ribosomal RNA large subunit methyltransferase J
PAMFEDIP_00113	2.15e-99	argR2	-	-	K	ko:K03402	-	ko00000,ko03000	Regulates arginine biosynthesis genes
PAMFEDIP_00114	0.0	recN	-	-	L	ko:K03631	-	ko00000,ko03400	May be involved in recombinational repair of damaged DNA
PAMFEDIP_00115	4.51e-284	opuCA	-	-	E	ko:K05847	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter, ATP-binding protein
PAMFEDIP_00116	7.11e-135	opuCB	-	-	E	ko:K05846	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
PAMFEDIP_00117	3.8e-224	opuCC	-	-	M	ko:K05845	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Periplasmic glycine betaine choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)
PAMFEDIP_00118	1.36e-136	opuCD	-	-	P	ko:K05846	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PAMFEDIP_00119	8.28e-73	-	-	-	-	-	-	-	-
PAMFEDIP_00120	6.96e-145	gmk	2.7.4.8	-	F	ko:K00942	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko00002,ko01000	Essential for recycling GMP and indirectly, cGMP
PAMFEDIP_00121	3.93e-41	rpoZ	2.7.7.6	-	K	ko:K03060	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
PAMFEDIP_00122	1.02e-277	coaBC	4.1.1.36, 6.3.2.5	-	H	ko:K01598,ko:K13038	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
PAMFEDIP_00123	0.0	priA	-	-	L	ko:K04066	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
PAMFEDIP_00124	1.01e-222	fmt	2.1.2.9	-	J	ko:K00604	ko00670,ko00970,map00670,map00970	ko00000,ko00001,ko01000	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
PAMFEDIP_00125	0.0	sun	2.1.1.176	-	J	ko:K03500	-	ko00000,ko01000,ko03009	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
PAMFEDIP_00126	1.62e-173	stp	3.1.3.16	-	T	ko:K20074	-	ko00000,ko01000,ko01009	phosphatase
PAMFEDIP_00127	0.0	prkC	2.7.11.1	-	KLT	ko:K08884,ko:K12132	-	ko00000,ko01000,ko01001	serine threonine protein kinase
PAMFEDIP_00128	1.21e-209	rsgA	3.1.3.100	-	S	ko:K06949	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000,ko03009	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
PAMFEDIP_00129	3.16e-151	rpe	5.1.3.1	-	G	ko:K01783	ko00030,ko00040,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the ribulose-phosphate 3-epimerase family
PAMFEDIP_00130	1.84e-160	thiN	2.7.6.2	-	H	ko:K00949	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000	thiamine pyrophosphokinase
PAMFEDIP_00131	1.61e-36	rpmB	-	-	J	ko:K02902	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL28 family
PAMFEDIP_00132	7.09e-76	yloU	-	-	S	-	-	-	Asp23 family, cell envelope-related function
PAMFEDIP_00133	0.0	yloV	-	-	S	ko:K07030	-	ko00000	DAK2 domain fusion protein YloV
PAMFEDIP_00134	0.0	recG	3.6.4.12	-	L	ko:K03655	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
PAMFEDIP_00135	2.17e-244	plsX	2.3.1.15	-	I	ko:K03621	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
PAMFEDIP_00136	3.33e-47	acpP	-	-	IQ	ko:K02078	-	ko00000,ko00001	Carrier of the growing fatty acid chain in fatty acid biosynthesis
PAMFEDIP_00137	4.49e-167	rnc	3.1.26.3	-	J	ko:K03685	ko03008,ko05205,map03008,map05205	ko00000,ko00001,ko01000,ko03009,ko03019,ko03036	Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
PAMFEDIP_00138	0.0	smc	-	-	D	ko:K03529	-	ko00000,ko03036	Required for chromosome condensation and partitioning
PAMFEDIP_00139	2.85e-293	ftsY	-	-	U	ko:K03110	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
PAMFEDIP_00140	1.46e-77	ylxM	-	-	S	ko:K09787	-	ko00000	Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
PAMFEDIP_00141	7.69e-300	ffh	3.6.5.4	-	U	ko:K03106	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko01000,ko02044	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
PAMFEDIP_00142	1.6e-58	rpsP	-	-	J	ko:K02959	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Belongs to the bacterial ribosomal protein bS16 family
PAMFEDIP_00143	9.99e-53	ylqC	-	-	S	ko:K06960	-	ko00000	Belongs to the UPF0109 family
PAMFEDIP_00144	6.42e-123	rimM	-	-	J	ko:K02860	-	ko00000,ko03009	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
PAMFEDIP_00145	1.57e-179	trmD	2.1.1.228	-	J	ko:K00554	-	ko00000,ko01000,ko03016	Belongs to the RNA methyltransferase TrmD family
PAMFEDIP_00146	3.15e-78	rplS	-	-	J	ko:K02884	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
PAMFEDIP_00147	3.2e-70	-	-	-	-	-	-	-	-
PAMFEDIP_00148	0.0	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
PAMFEDIP_00149	9.06e-112	-	-	-	-	-	-	-	-
PAMFEDIP_00150	2.05e-179	ecsA_2	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	AAA domain, putative AbiEii toxin, Type IV TA system
PAMFEDIP_00151	0.0	XK27_00765	-	-	-	ko:K01992	-	ko00000,ko00002,ko02000	-
PAMFEDIP_00153	0.0	trpE	4.1.3.27	-	EH	ko:K01657	ko00400,ko00405,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00400,map00405,map01100,map01110,map01130,map01230,map02024,map02025	ko00000,ko00001,ko00002,ko01000	Anthranilate synthase component I, N terminal region
PAMFEDIP_00154	8.08e-135	trpG	4.1.3.27	-	EH	ko:K01658	ko00400,ko00405,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00400,map00405,map01100,map01110,map01130,map01230,map02024,map02025	ko00000,ko00001,ko00002,ko01000	Peptidase C26
PAMFEDIP_00155	6.03e-226	trpD	2.4.2.18, 4.1.3.27	-	F	ko:K00766,ko:K13497	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
PAMFEDIP_00156	2.41e-165	trpC	4.1.1.48, 5.3.1.24	-	E	ko:K01609,ko:K13498	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the TrpC family
PAMFEDIP_00157	1.57e-142	trpF	5.3.1.24	-	E	ko:K01817	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the TrpF family
PAMFEDIP_00158	5.13e-287	trpB	4.2.1.20, 5.3.1.24	-	E	ko:K01696,ko:K01817	ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
PAMFEDIP_00159	4.82e-183	trpA	4.2.1.20	-	E	ko:K01695	ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
PAMFEDIP_00160	5.89e-126	entB	-	-	Q	-	-	-	Isochorismatase family
PAMFEDIP_00161	1.36e-210	-	1.6.5.5	-	C	ko:K00344	-	ko00000,ko01000	Zinc-binding dehydrogenase
PAMFEDIP_00162	1.95e-88	ybbJ	-	-	K	-	-	-	Acetyltransferase (GNAT) family
PAMFEDIP_00163	1.62e-276	-	-	-	E	-	-	-	glutamate:sodium symporter activity
PAMFEDIP_00164	3.38e-274	hipO1	-	-	E	ko:K21613	-	ko00000,ko01000,ko01002	Peptidase family M20/M25/M40
PAMFEDIP_00165	2.69e-252	adhB	1.1.1.1	-	E	ko:K00001	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	alcohol dehydrogenase
PAMFEDIP_00166	1.49e-77	-	-	-	S	-	-	-	Protein of unknown function (DUF1648)
PAMFEDIP_00168	6.84e-186	yneD	-	-	S	-	-	-	Belongs to the short-chain dehydrogenases reductases (SDR) family
PAMFEDIP_00169	1.62e-229	yneE	-	-	K	-	-	-	Transcriptional regulator
PAMFEDIP_00170	8.55e-99	fabZ	4.2.1.59	-	I	ko:K02372	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
PAMFEDIP_00171	1.62e-229	fabH	2.3.1.180	-	I	ko:K00648	ko00061,ko01100,ko01212,map00061,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
PAMFEDIP_00172	6.16e-48	acpP	-	-	IQ	ko:K02078	-	ko00000,ko00001	Carrier of the growing fatty acid chain in fatty acid biosynthesis
PAMFEDIP_00173	3.47e-215	fabD	2.3.1.39	-	I	ko:K00645,ko:K15327,ko:K15329	ko00061,ko00333,ko01100,ko01130,ko01212,map00061,map00333,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004,ko01008	Malonyl CoA-acyl carrier protein transacylase
PAMFEDIP_00174	1.26e-162	fabG	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	reductase
PAMFEDIP_00175	1.8e-288	fabF	2.3.1.179	-	I	ko:K09458	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
PAMFEDIP_00176	2.14e-95	accB	-	-	I	ko:K02160	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002	first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
PAMFEDIP_00177	1.71e-91	fabZ2	4.2.1.59	-	I	ko:K02372	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	FabA-like domain
PAMFEDIP_00178	0.0	accC	6.3.4.14, 6.4.1.2	-	I	ko:K01961	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002,ko01000	Acetyl-CoA carboxylase biotin carboxylase subunit
PAMFEDIP_00179	6.43e-203	accD	2.1.3.15, 6.4.1.2	-	I	ko:K01963	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002,ko01000	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
PAMFEDIP_00180	4.82e-179	accA	2.1.3.15, 6.4.1.2	-	I	ko:K01962	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002,ko01000	alpha subunit
PAMFEDIP_00181	2.29e-175	fabI	1.3.1.10, 1.3.1.9	-	I	ko:K00208	ko00061,ko00333,ko00780,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Enoyl- acyl-carrier-protein reductase NADH
PAMFEDIP_00182	5.01e-129	-	-	-	H	ko:K06133	ko00770,map00770	ko00000,ko00001,ko01000	Belongs to the P-Pant transferase superfamily
PAMFEDIP_00183	1.48e-161	-	-	-	S	ko:K07150	-	ko00000	Protein of unknown function (DUF554)
PAMFEDIP_00184	7.52e-207	-	-	-	K	-	-	-	LysR substrate binding domain
PAMFEDIP_00185	2.01e-113	ykhA	-	-	I	-	-	-	Thioesterase superfamily
PAMFEDIP_00186	4.4e-246	rsgA_2	3.1.3.100	-	S	ko:K06949	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000,ko03009	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
PAMFEDIP_00187	4.09e-119	-	-	-	K	-	-	-	transcriptional regulator
PAMFEDIP_00188	0.0	-	-	-	EGP	-	-	-	Major Facilitator
PAMFEDIP_00189	1.14e-193	-	-	-	O	-	-	-	Band 7 protein
PAMFEDIP_00190	1.48e-71	-	-	-	-	-	-	-	-
PAMFEDIP_00191	2.02e-39	-	-	-	-	-	-	-	-
PAMFEDIP_00192	6.57e-274	cfa	2.1.1.79	-	M	ko:K00574	-	ko00000,ko01000	cyclopropane-fatty-acyl-phospholipid synthase
PAMFEDIP_00193	3.2e-37	-	-	-	L	ko:K07497	-	ko00000	hmm pf00665
PAMFEDIP_00194	9.96e-147	-	1.14.99.53	AA10	S	ko:K21713	-	ko00000,ko01000	Lytic polysaccharide mono-oxygenase, cellulose-degrading
PAMFEDIP_00195	5.93e-60	ycnE	-	-	S	-	-	-	Antibiotic biosynthesis monooxygenase
PAMFEDIP_00196	2.05e-55	-	-	-	-	-	-	-	-
PAMFEDIP_00197	6.05e-108	tspO	-	-	T	ko:K05770	ko04080,ko04214,ko04979,ko05166,map04080,map04214,map04979,map05166	ko00000,ko00001,ko02000	TspO/MBR family
PAMFEDIP_00198	5.28e-100	-	-	-	T	-	-	-	Belongs to the universal stress protein A family
PAMFEDIP_00199	5.58e-87	-	-	-	S	-	-	-	Protein of unknown function (DUF805)
PAMFEDIP_00200	7.38e-146	-	-	-	I	-	-	-	Diacylglycerol kinase catalytic domain
PAMFEDIP_00201	8.76e-48	-	-	-	-	-	-	-	-
PAMFEDIP_00202	5.79e-21	-	-	-	-	-	-	-	-
PAMFEDIP_00203	2.22e-55	-	-	-	S	-	-	-	transglycosylase associated protein
PAMFEDIP_00204	4e-40	-	-	-	S	-	-	-	CsbD-like
PAMFEDIP_00205	1.06e-53	-	-	-	-	-	-	-	-
PAMFEDIP_00206	0.0	pepD4	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
PAMFEDIP_00207	8.39e-38	dmpI	5.3.2.6	-	G	ko:K01821	ko00362,ko00621,ko00622,ko01100,ko01120,ko01220,map00362,map00621,map00622,map01100,map01120,map01220	ko00000,ko00001,ko00002,ko01000	Belongs to the 4-oxalocrotonate tautomerase family
PAMFEDIP_00208	0.0	lysA	4.1.1.20	-	E	ko:K01586	ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
PAMFEDIP_00209	1.48e-218	-	2.5.1.74	-	H	ko:K02548	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01006	UbiA prenyltransferase family
PAMFEDIP_00210	5.03e-182	-	-	-	U	ko:K10716	-	ko00000,ko02000	Ion channel
PAMFEDIP_00211	1.25e-66	-	-	-	-	-	-	-	-
PAMFEDIP_00212	3.23e-58	-	-	-	-	-	-	-	-
PAMFEDIP_00213	0.0	gabT	2.6.1.19, 5.1.1.21	-	E	ko:K00823,ko:K20708	ko00250,ko00410,ko00640,ko00650,ko01100,ko01120,map00250,map00410,map00640,map00650,map01100,map01120	ko00000,ko00001,ko00002,ko01000,ko01007	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
PAMFEDIP_00214	0.0	-	-	-	E	ko:K03294	-	ko00000	Amino Acid
PAMFEDIP_00215	3.86e-192	yitU	3.1.3.104	-	S	ko:K21064	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	hydrolase
PAMFEDIP_00216	0.0	rsmF	-	-	J	-	-	-	NOL1 NOP2 sun family protein
PAMFEDIP_00217	3.24e-155	-	-	-	S	-	-	-	Domain of unknown function (DUF4767)
PAMFEDIP_00218	0.0	malT	-	-	G	ko:K16211	-	ko00000,ko02000	Major Facilitator
PAMFEDIP_00219	0.0	mapA	2.4.1.8	GH65	G	ko:K00691	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	hydrolase, family 65, central catalytic
PAMFEDIP_00220	3.36e-247	galM2	5.1.3.3	-	G	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the interconversion of alpha and beta anomers of maltose
PAMFEDIP_00221	8.61e-251	fni	5.3.3.2	-	C	ko:K01823	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
PAMFEDIP_00222	1.61e-168	mvaK2	2.7.4.2	-	I	ko:K00938	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	phosphomevalonate kinase
PAMFEDIP_00223	1.1e-230	mvaD	4.1.1.33	-	I	ko:K01597	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	diphosphomevalonate decarboxylase
PAMFEDIP_00224	1.48e-217	mvk	2.7.1.36	-	I	ko:K00869	ko00900,ko01100,ko01110,ko01130,ko04146,map00900,map01100,map01110,map01130,map04146	ko00000,ko00001,ko00002,ko01000	mevalonate kinase
PAMFEDIP_00225	0.0	dinG	3.6.4.12	-	L	ko:K03722	-	ko00000,ko01000,ko03400	helicase involved in DNA repair and perhaps also replication
PAMFEDIP_00226	2.53e-107	ypmB	-	-	S	-	-	-	protein conserved in bacteria
PAMFEDIP_00227	3.1e-289	aspB	2.6.1.1, 2.6.1.14	-	E	ko:K00812,ko:K22457	ko00220,ko00250,ko00270,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko01000,ko01007	Aminotransferase
PAMFEDIP_00228	0.0	asnS	6.1.1.22	-	J	ko:K01893	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Asparaginyl-tRNA synthetase
PAMFEDIP_00229	9.32e-165	dnaD	-	-	L	ko:K02086	-	ko00000	Replication initiation and membrane attachment
PAMFEDIP_00231	2.32e-238	metN	-	-	P	ko:K02071	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
PAMFEDIP_00232	2.45e-142	metI	-	-	P	ko:K02072	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
PAMFEDIP_00233	1.58e-203	metQ1	-	-	P	ko:K02073	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the nlpA lipoprotein family
PAMFEDIP_00234	5.32e-109	-	-	-	T	-	-	-	Universal stress protein family
PAMFEDIP_00235	0.0	ftpA	-	-	P	ko:K02011	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PAMFEDIP_00236	8.06e-234	ftpB	-	-	P	ko:K02012	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding protein
PAMFEDIP_00237	4.64e-228	phnT	3.6.3.30	-	P	ko:K02010	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATPases associated with a variety of cellular activities
PAMFEDIP_00238	0.0	ponA	2.4.1.129, 3.4.16.4	GT51	M	ko:K05366	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01003,ko01011	penicillin-binding protein 1A
PAMFEDIP_00239	3.6e-152	recU	-	-	L	ko:K03700	-	ko00000,ko03400	Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
PAMFEDIP_00240	2.12e-142	ypsA	-	-	S	-	-	-	Belongs to the UPF0398 family
PAMFEDIP_00241	9.98e-75	gpsB	-	-	D	-	-	-	Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
PAMFEDIP_00243	1.44e-282	ypsC	-	-	L	ko:K07444	-	ko00000,ko01000	Belongs to the methyltransferase superfamily
PAMFEDIP_00244	1.26e-61	-	-	-	K	-	-	-	helix_turn_helix, Arsenical Resistance Operon Repressor
PAMFEDIP_00245	1.55e-309	-	-	-	P	-	-	-	Major Facilitator Superfamily
PAMFEDIP_00246	4.17e-186	yitV	-	-	S	ko:K06889	-	ko00000	COG1073 Hydrolases of the alpha beta superfamily
PAMFEDIP_00247	9.19e-95	-	-	-	S	-	-	-	SnoaL-like domain
PAMFEDIP_00248	9.63e-307	-	-	-	M	-	-	-	Glycosyltransferase, group 2 family protein
PAMFEDIP_00249	3.46e-267	mccF	-	-	V	-	-	-	LD-carboxypeptidase
PAMFEDIP_00250	1.66e-101	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
PAMFEDIP_00251	1.56e-262	icaA	-	-	M	-	-	-	Glycosyl transferase family group 2
PAMFEDIP_00252	0.0	-	-	-	-	-	-	-	-
PAMFEDIP_00253	1.45e-260	ftsW	-	-	D	ko:K03588	ko04112,map04112	ko00000,ko00001,ko02000,ko03036	Belongs to the SEDS family
PAMFEDIP_00254	0.0	pyc	6.4.1.1	-	C	ko:K01958	ko00020,ko00620,ko00720,ko01100,ko01120,ko01200,ko01230,map00020,map00620,map00720,map01100,map01120,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
PAMFEDIP_00255	1.91e-66	ylbG	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2129)
PAMFEDIP_00256	8.61e-132	rsmD	2.1.1.171	-	L	ko:K08316	-	ko00000,ko01000,ko03009	RNA methyltransferase, RsmD family
PAMFEDIP_00257	7.04e-108	coaD	2.7.7.3	-	H	ko:K00954	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
PAMFEDIP_00258	1.05e-251	lon	-	-	T	ko:K07177	ko02024,map02024	ko00000,ko00001,ko01002	Belongs to the peptidase S16 family
PAMFEDIP_00259	2.1e-161	comEA	-	-	L	ko:K02237	-	ko00000,ko00002,ko02044	Competence protein ComEA
PAMFEDIP_00260	7.1e-116	comEB	3.5.4.12	-	F	ko:K01493	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko02044	ComE operon protein 2
PAMFEDIP_00261	0.0	comEC	-	-	S	ko:K02238	-	ko00000,ko00002,ko02044	Competence protein ComEC
PAMFEDIP_00262	8.43e-240	holA	2.7.7.7	-	L	ko:K02340	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III delta subunit
PAMFEDIP_00263	1.18e-46	rpsT	-	-	J	ko:K02968	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 16S ribosomal RNA
PAMFEDIP_00264	2.9e-56	rpsO	-	-	J	ko:K02956	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
PAMFEDIP_00265	1.8e-135	-	-	-	EGP	-	-	-	Major Facilitator Superfamily
PAMFEDIP_00266	1.29e-200	dapA	4.3.3.7	-	E	ko:K01714	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
PAMFEDIP_00267	0.0	rnjB	-	-	J	ko:K12574	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PAMFEDIP_00268	9.34e-201	-	-	-	S	-	-	-	Tetratricopeptide repeat
PAMFEDIP_00269	4.38e-286	tuf	-	-	J	ko:K02358,ko:K15771	ko02010,map02010	ko00000,ko00001,ko00002,ko02000,ko03012,ko03029,ko04147	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
PAMFEDIP_00270	3.21e-288	tig	-	-	D	ko:K03545	-	ko00000	Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
PAMFEDIP_00271	7.8e-300	clpX	-	-	O	ko:K03544	ko04112,map04112	ko00000,ko00001,ko03110	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
PAMFEDIP_00272	9.6e-143	engB	-	-	D	ko:K03978	-	ko00000,ko03036	Necessary for normal cell division and for the maintenance of normal septation
PAMFEDIP_00273	1.3e-65	-	-	-	S	-	-	-	mazG nucleotide pyrophosphohydrolase
PAMFEDIP_00274	6.47e-95	-	-	-	S	-	-	-	Iron-sulphur cluster biosynthesis
PAMFEDIP_00275	5.12e-31	-	-	-	-	-	-	-	-
PAMFEDIP_00276	0.0	glnPH2	-	-	P	ko:K02029,ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter permease
PAMFEDIP_00277	3.97e-173	glnQ	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
PAMFEDIP_00278	0.0	uvrC	-	-	L	ko:K03703	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
PAMFEDIP_00279	8.45e-162	epsB	-	-	M	-	-	-	biosynthesis protein
PAMFEDIP_00280	2.02e-156	ywqD	-	-	D	-	-	-	Capsular exopolysaccharide family
PAMFEDIP_00281	5.54e-189	ywqE	3.1.3.48	-	GM	ko:K01104	-	ko00000,ko01000	PHP domain protein
PAMFEDIP_00282	8.71e-231	cps4D	5.1.3.2, 5.1.3.25	-	M	ko:K01784,ko:K17947	ko00052,ko00520,ko00523,ko01100,ko01130,map00052,map00520,map00523,map01100,map01130	ko00000,ko00001,ko00002,ko01000	RmlD substrate binding domain
PAMFEDIP_00283	3.18e-162	tuaA	-	-	M	-	-	-	Bacterial sugar transferase
PAMFEDIP_00284	1.43e-223	cps4F	-	-	M	-	-	-	Glycosyl transferases group 1
PAMFEDIP_00285	1.82e-132	cps4G	-	-	M	-	-	-	Glycosyltransferase Family 4
PAMFEDIP_00286	7.88e-48	cps4G	-	-	M	-	-	-	Glycosyltransferase Family 4
PAMFEDIP_00287	1.91e-297	-	-	-	-	-	-	-	-
PAMFEDIP_00288	4.82e-228	cps4I	-	-	M	-	-	-	Glycosyltransferase like family 2
PAMFEDIP_00289	0.0	cps4J	-	-	S	-	-	-	MatE
PAMFEDIP_00290	0.0	-	3.1.4.53	-	S	ko:K03651	ko00230,ko02025,map00230,map02025	ko00000,ko00001,ko01000	Calcineurin-like phosphoesterase
PAMFEDIP_00291	0.0	fruA	2.7.1.202	-	GT	ko:K02768,ko:K02769,ko:K02770	ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphotransferase System
PAMFEDIP_00292	4.24e-218	pfkB	2.7.1.56	-	H	ko:K00882	ko00051,map00051	ko00000,ko00001,ko01000	Belongs to the carbohydrate kinase PfkB family. LacC subfamily
PAMFEDIP_00293	3.02e-175	fruR	-	-	K	ko:K03436	-	ko00000,ko03000	DeoR C terminal sensor domain
PAMFEDIP_00294	1.55e-311	obg	-	-	S	ko:K03979	-	ko00000,ko01000,ko03009	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
PAMFEDIP_00295	6.62e-62	-	-	-	-	-	-	-	-
PAMFEDIP_00296	8.34e-228	rnz	3.1.26.11	-	J	ko:K00784	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
PAMFEDIP_00297	7.09e-180	-	-	-	S	ko:K07124	-	ko00000	Belongs to the short-chain dehydrogenases reductases (SDR) family
PAMFEDIP_00298	1.84e-67	-	-	-	S	-	-	-	Lipopolysaccharide assembly protein A domain
PAMFEDIP_00299	0.0	recJ	-	-	L	ko:K07462	ko03410,ko03430,ko03440,map03410,map03430,map03440	ko00000,ko00001,ko01000,ko03400	Single-stranded-DNA-specific exonuclease RecJ
PAMFEDIP_00300	1.52e-120	apt	2.4.2.7	-	F	ko:K00759	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000,ko04147	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
PAMFEDIP_00301	3.58e-129	-	-	-	K	-	-	-	Helix-turn-helix domain
PAMFEDIP_00302	1.66e-269	-	-	-	EGP	-	-	-	Major facilitator Superfamily
PAMFEDIP_00303	2.84e-75	ybjQ	-	-	S	-	-	-	Belongs to the UPF0145 family
PAMFEDIP_00304	2.21e-178	-	-	-	Q	-	-	-	Methyltransferase
PAMFEDIP_00305	5.03e-43	-	-	-	-	-	-	-	-
PAMFEDIP_00306	6.15e-75	int3	-	-	L	-	-	-	Belongs to the 'phage' integrase family
PAMFEDIP_00313	2.59e-99	-	-	-	K	-	-	-	Peptidase S24-like
PAMFEDIP_00314	1.56e-27	-	-	-	-	-	-	-	-
PAMFEDIP_00317	7.34e-80	-	-	-	S	-	-	-	DNA binding
PAMFEDIP_00324	2e-25	-	-	-	-	-	-	-	-
PAMFEDIP_00326	4.24e-188	-	-	-	S	-	-	-	Protein of unknown function (DUF1351)
PAMFEDIP_00327	3.98e-151	-	-	-	S	-	-	-	AAA domain
PAMFEDIP_00328	3.13e-127	-	-	-	S	-	-	-	Protein of unknown function (DUF669)
PAMFEDIP_00329	2.93e-167	-	-	-	S	-	-	-	Putative HNHc nuclease
PAMFEDIP_00330	6.11e-56	-	-	-	L	-	-	-	DnaD domain protein
PAMFEDIP_00331	2.84e-169	-	-	-	L	ko:K02315	-	ko00000,ko03032	IstB-like ATP binding protein
PAMFEDIP_00333	4.01e-87	-	-	-	L	-	-	-	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC
PAMFEDIP_00334	2.95e-06	-	-	-	-	-	-	-	-
PAMFEDIP_00336	8.89e-118	-	-	-	L	-	-	-	C-5 cytosine-specific DNA methylase
PAMFEDIP_00338	1.28e-09	-	-	-	S	-	-	-	YopX protein
PAMFEDIP_00339	5.27e-72	-	-	-	-	-	-	-	-
PAMFEDIP_00340	2.2e-23	-	-	-	-	-	-	-	-
PAMFEDIP_00341	1.13e-84	-	-	-	S	-	-	-	Transcriptional regulator, RinA family
PAMFEDIP_00342	1.26e-12	-	-	-	-	-	-	-	-
PAMFEDIP_00343	7.81e-113	-	-	-	L	-	-	-	HNH nucleases
PAMFEDIP_00345	6.68e-103	-	-	-	L	-	-	-	Phage terminase, small subunit
PAMFEDIP_00346	0.0	-	-	-	S	-	-	-	Phage Terminase
PAMFEDIP_00347	6.68e-35	-	-	-	S	-	-	-	Protein of unknown function (DUF1056)
PAMFEDIP_00348	6.97e-284	-	-	-	S	-	-	-	Phage portal protein
PAMFEDIP_00349	5.99e-164	-	3.4.21.92	-	OU	ko:K01358	ko04112,ko04212,map04112,map04212	ko00000,ko00001,ko01000,ko01002	Belongs to the peptidase S14 family
PAMFEDIP_00350	1.03e-254	-	-	-	S	-	-	-	Phage capsid family
PAMFEDIP_00351	9.36e-65	-	-	-	S	-	-	-	Phage gp6-like head-tail connector protein
PAMFEDIP_00352	3.45e-76	-	-	-	S	-	-	-	Phage head-tail joining protein
PAMFEDIP_00353	2.25e-86	-	-	-	S	-	-	-	Bacteriophage HK97-gp10, putative tail-component
PAMFEDIP_00354	7.47e-74	-	-	-	S	-	-	-	Protein of unknown function (DUF806)
PAMFEDIP_00355	2.16e-131	-	-	-	S	-	-	-	Phage tail tube protein
PAMFEDIP_00356	1.35e-75	-	-	-	S	-	-	-	Phage tail assembly chaperone proteins, TAC
PAMFEDIP_00357	6.36e-34	-	-	-	-	-	-	-	-
PAMFEDIP_00358	0.0	-	-	-	D	-	-	-	domain protein
PAMFEDIP_00359	0.0	-	-	-	S	-	-	-	Phage tail protein
PAMFEDIP_00360	0.0	-	-	-	S	-	-	-	Phage minor structural protein
PAMFEDIP_00364	1.93e-102	-	-	-	-	-	-	-	-
PAMFEDIP_00365	2.91e-29	-	-	-	-	-	-	-	-
PAMFEDIP_00366	6.43e-263	-	-	-	M	-	-	-	Glycosyl hydrolases family 25
PAMFEDIP_00367	6.01e-49	-	-	-	S	-	-	-	Bacteriophage holin
PAMFEDIP_00368	2.58e-147	cbh	3.5.1.24	-	M	ko:K01442	ko00120,ko00121,ko01100,map00120,map00121,map01100	ko00000,ko00001,ko01000	Linear amide C-N hydrolase, choloylglycine hydrolase family protein
PAMFEDIP_00370	3.62e-249	tsaD	2.3.1.234	-	J	ko:K01409	-	ko00000,ko01000,ko03016	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
PAMFEDIP_00371	5.74e-108	rimI	2.3.1.128	-	K	ko:K03789	-	ko00000,ko01000,ko03009	This enzyme acetylates the N-terminal alanine of ribosomal protein S18
PAMFEDIP_00372	4.66e-131	rimI	2.3.1.128	-	K	ko:K03789	-	ko00000,ko01000,ko03009	Ribosomal-protein-alanine acetyltransferase
PAMFEDIP_00373	6.84e-167	yeaZ	2.3.1.234	-	O	ko:K01409,ko:K14742	-	ko00000,ko01000,ko03016	Universal bacterial protein YeaZ
PAMFEDIP_00374	3.46e-242	phnD	-	-	P	ko:K02044	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Phosphonate ABC transporter
PAMFEDIP_00375	3.8e-176	phnC	3.6.3.28	-	P	ko:K02041	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
PAMFEDIP_00376	2.18e-176	phnE2	-	-	U	ko:K02042	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Phosphonate ABC transporter permease
PAMFEDIP_00377	3.33e-184	phnE1	-	-	U	ko:K02042	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
PAMFEDIP_00378	2.8e-187	phnX	3.11.1.1	-	E	ko:K05306	ko00440,ko01100,ko01120,map00440,map01100,map01120	ko00000,ko00001,ko01000	Belongs to the HAD-like hydrolase superfamily. PhnX family
PAMFEDIP_00379	5.35e-270	phnW	2.6.1.37	-	E	ko:K03430	ko00440,ko01100,ko01120,map00440,map01100,map01120	ko00000,ko00001,ko01000,ko01007	Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. PhnW subfamily
PAMFEDIP_00380	4.95e-246	galE	5.1.3.2	-	M	ko:K01784	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the NAD(P)-dependent epimerase dehydratase family
PAMFEDIP_00381	1.29e-190	fat	3.1.2.21	-	I	ko:K01071	ko00061,ko01100,map00061,map01100	ko00000,ko00001,ko01000,ko01004	Acyl-ACP thioesterase
PAMFEDIP_00382	2.64e-213	rsmI	2.1.1.198	-	H	ko:K07056	-	ko00000,ko01000,ko03009	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
PAMFEDIP_00383	8.46e-77	yabA	-	-	L	-	-	-	Involved in initiation control of chromosome replication
PAMFEDIP_00384	2.33e-239	holB	2.7.7.7	-	L	ko:K02341	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III
PAMFEDIP_00385	1.39e-70	yaaQ	-	-	S	-	-	-	Cyclic-di-AMP receptor
PAMFEDIP_00386	1.82e-152	tmk	2.7.4.9	-	F	ko:K00943	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
PAMFEDIP_00387	1.01e-51	yaaL	-	-	S	-	-	-	Protein of unknown function (DUF2508)
PAMFEDIP_00388	6.22e-140	recR	-	-	L	ko:K06187	ko03440,map03440	ko00000,ko00001,ko03400	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
PAMFEDIP_00389	8.34e-62	yaaK	-	-	S	ko:K09747	-	ko00000	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
PAMFEDIP_00390	0.0	dnaX	2.7.7.7	-	L	ko:K02343	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PAMFEDIP_00391	7.57e-119	tadA	3.5.4.33	-	F	ko:K11991	-	ko00000,ko01000,ko03016	Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
PAMFEDIP_00392	6.7e-141	rsmC	2.1.1.172	-	J	ko:K00564	-	ko00000,ko01000,ko03009	Methyltransferase
PAMFEDIP_00393	8.42e-50	nrdH	-	-	O	ko:K06191	-	ko00000	Glutaredoxin
PAMFEDIP_00394	0.0	nrdE	1.17.4.1	-	F	ko:K00525	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PAMFEDIP_00395	2.47e-253	nrdF	1.17.4.1	-	F	ko:K00526	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PAMFEDIP_00396	2.37e-140	yvdD	3.2.2.10	-	S	ko:K06966	ko00230,ko00240,map00230,map00240	ko00000,ko00001,ko01000	Belongs to the LOG family
PAMFEDIP_00397	0.0	mprF	2.3.2.3	-	S	ko:K14205	ko01503,ko02020,ko05150,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01000,ko01504	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
PAMFEDIP_00398	4.82e-86	-	-	-	L	-	-	-	nuclease
PAMFEDIP_00399	1.01e-226	-	-	-	F	ko:K15051	-	ko00000	DNA/RNA non-specific endonuclease
PAMFEDIP_00400	2.76e-74	rplL	-	-	J	ko:K02935	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
PAMFEDIP_00401	3.72e-105	rplJ	-	-	J	ko:K02864	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
PAMFEDIP_00402	2.69e-158	rplA	-	-	J	ko:K02863	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
PAMFEDIP_00403	9.76e-93	rplK	-	-	J	ko:K02867	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
PAMFEDIP_00404	2.81e-202	-	-	-	S	-	-	-	Alpha/beta hydrolase of unknown function (DUF915)
PAMFEDIP_00405	1.89e-128	nusG	-	-	K	ko:K02601	-	ko00000,ko03009,ko03021	Participates in transcription elongation, termination and antitermination
PAMFEDIP_00406	1e-39	secE	-	-	U	ko:K03073	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
PAMFEDIP_00407	4.55e-31	rpmG	-	-	J	ko:K02913	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL33 family
PAMFEDIP_00408	1.12e-130	sigH	-	-	K	ko:K03088,ko:K03091,ko:K12296	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko03000,ko03021	Sigma-70 region 2
PAMFEDIP_00409	1.44e-125	yacP	-	-	S	ko:K06962	-	ko00000	YacP-like NYN domain
PAMFEDIP_00410	1.49e-177	trmH	2.1.1.185	-	J	ko:K03218	-	ko00000,ko01000,ko03009	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PAMFEDIP_00411	1.35e-92	mrnC	-	-	J	ko:K11145	-	ko00000,ko01000,ko03009	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
PAMFEDIP_00412	0.0	cysS	6.1.1.16	-	J	ko:K01883	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-I aminoacyl-tRNA synthetase family
PAMFEDIP_00413	0.0	gltX	6.1.1.24	-	J	ko:K09698	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
PAMFEDIP_00414	4.91e-265	yacL	-	-	S	-	-	-	domain protein
PAMFEDIP_00415	0.0	radA	-	-	O	ko:K04485	-	ko00000,ko03400	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
PAMFEDIP_00416	9.43e-127	dut	3.6.1.23	-	F	ko:K01520	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	dUTP diphosphatase
PAMFEDIP_00417	5.96e-69	yjdJ	-	-	S	ko:K06975	-	ko00000	GCN5-related N-acetyl-transferase
PAMFEDIP_00418	1.62e-158	rpiA	5.3.1.6	-	G	ko:K01807	ko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
PAMFEDIP_00419	0.0	pepC	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	Peptidase C1-like family
PAMFEDIP_00420	3.22e-147	zmp2	-	-	O	-	-	-	Zinc-dependent metalloprotease
PAMFEDIP_00421	1.91e-165	gpmA1	5.4.2.11	-	G	ko:K01834	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PAMFEDIP_00422	1.22e-226	-	-	-	EG	-	-	-	EamA-like transporter family
PAMFEDIP_00423	3.06e-214	mleP2	-	-	S	ko:K07088	-	ko00000	Transporter, auxin efflux carrier (AEC) family protein
PAMFEDIP_00424	5.37e-233	brpA	-	-	K	-	-	-	Cell envelope-like function transcriptional attenuator common domain protein
PAMFEDIP_00425	1.05e-172	accA1	2.1.3.15, 6.4.1.2	-	I	ko:K01962	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002,ko01000	Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit
PAMFEDIP_00426	1.49e-183	accD1	2.1.3.15, 6.4.1.2	-	I	ko:K01963	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002,ko01000	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
PAMFEDIP_00427	1.7e-315	accC1	6.3.4.14, 6.4.1.2	-	I	ko:K01961	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002,ko01000	Biotin carboxylase C-terminal domain
PAMFEDIP_00428	9.24e-85	accB1	-	-	I	ko:K02160	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002	Biotin-requiring enzyme
PAMFEDIP_00429	3.15e-229	fabH	2.3.1.180	-	I	ko:K00648	ko00061,ko01100,ko01212,map00061,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
PAMFEDIP_00430	4.5e-113	manX	2.7.1.191, 2.7.1.202	-	G	ko:K02769,ko:K02793,ko:K02794	ko00051,ko00520,ko01100,ko01120,ko02060,map00051,map00520,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system sorbose subfamily IIB component
PAMFEDIP_00431	4.16e-93	levD	2.7.1.191, 2.7.1.202	-	G	ko:K02793,ko:K02794,ko:K11194	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system fructose IIA component
PAMFEDIP_00432	0.0	levR	-	-	K	-	-	-	Sigma-54 interaction domain
PAMFEDIP_00433	9.05e-85	manO	-	-	S	-	-	-	Domain of unknown function (DUF956)
PAMFEDIP_00434	4.22e-216	manN	-	-	G	ko:K02796	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	system, mannose fructose sorbose family IID component
PAMFEDIP_00435	4.51e-172	manM	-	-	G	ko:K02746,ko:K02795	ko00051,ko00052,ko00520,ko01100,ko02060,map00051,map00052,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	PTS system
PAMFEDIP_00436	6.46e-218	manL	2.7.1.191, 2.7.1.202	-	G	ko:K02769,ko:K02793,ko:K02794	ko00051,ko00520,ko01100,ko01120,ko02060,map00051,map00520,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system sorbose subfamily IIB component
PAMFEDIP_00437	1.53e-195	-	-	-	G	-	-	-	Peptidase_C39 like family
PAMFEDIP_00439	1.9e-198	thrB	2.7.1.39	-	F	ko:K00872	ko00260,ko01100,ko01110,ko01120,ko01230,map00260,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
PAMFEDIP_00440	1.71e-302	hom	1.1.1.3	-	E	ko:K00003	ko00260,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00270,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	homoserine dehydrogenase
PAMFEDIP_00441	3.09e-106	ydcK	-	-	S	ko:K03095	-	ko00000	Belongs to the SprT family
PAMFEDIP_00442	0.0	tex	-	-	K	ko:K06959	-	ko00000	Tex-like protein N-terminal domain protein
PAMFEDIP_00443	2.57e-94	-	-	-	-	ko:K02029,ko:K02030	-	ko00000,ko00002,ko02000	-
PAMFEDIP_00444	0.0	pacL	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	P-type ATPase
PAMFEDIP_00445	1.51e-196	nadE	6.3.1.5	-	F	ko:K01916	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
PAMFEDIP_00446	0.0	pncB	6.3.4.21	-	F	ko:K00763	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
PAMFEDIP_00447	5.44e-175	tagA	2.4.1.187	GT26	F	ko:K05946	ko05111,map05111	ko00000,ko00001,ko01000,ko01003	Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
PAMFEDIP_00448	5.41e-160	yvoA_2	-	-	K	ko:K03710	-	ko00000,ko03000	UbiC transcription regulator-associated domain protein
PAMFEDIP_00449	2.92e-280	nagA	3.5.1.25	-	G	ko:K01443	ko00520,ko01130,map00520,map01130	ko00000,ko00001,ko01000	Belongs to the metallo-dependent hydrolases superfamily. NagA family
PAMFEDIP_00450	2.18e-174	proC	1.5.1.2	-	E	ko:K00286	ko00330,ko01100,ko01110,ko01130,ko01230,map00330,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
PAMFEDIP_00451	1.06e-195	pnuC	-	-	H	ko:K03811	-	ko00000,ko02000	nicotinamide mononucleotide transporter
PAMFEDIP_00452	1.59e-247	ysdE	-	-	P	-	-	-	Citrate transporter
PAMFEDIP_00453	3.1e-212	pphA	3.1.3.16	-	T	ko:K07313	-	ko00000,ko01000	Calcineurin-like phosphoesterase
PAMFEDIP_00454	1.38e-71	-	-	-	S	-	-	-	Cupin domain
PAMFEDIP_00455	9.02e-66	-	-	-	S	-	-	-	Cupin 2, conserved barrel domain protein
PAMFEDIP_00459	9.76e-154	-	-	-	S	-	-	-	Calcineurin-like phosphoesterase
PAMFEDIP_00460	1.18e-27	-	-	-	S	-	-	-	Calcineurin-like phosphoesterase
PAMFEDIP_00461	0.0	dtpT	-	-	U	ko:K03305	-	ko00000	amino acid peptide transporter
PAMFEDIP_00462	0.0	ltaS	2.7.8.20	-	M	ko:K19005	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
PAMFEDIP_00463	1.56e-46	ykuJ	-	-	S	-	-	-	Protein of unknown function (DUF1797)
PAMFEDIP_00464	3.91e-289	araT	-	-	E	ko:K00841	ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase
PAMFEDIP_00465	2.29e-292	dacA2	3.4.16.4	-	M	ko:K07258	ko00550,ko01100,map00550,map01100	ko00000,ko00001,ko01000,ko01002,ko01011	Belongs to the peptidase S11 family
PAMFEDIP_00466	2.16e-241	mprF	-	-	I	ko:K07027	-	ko00000,ko02000	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
PAMFEDIP_00467	2.04e-254	cpoA	2.4.1.208	GT4	M	ko:K13677,ko:K13678	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000,ko01003	Glycosyltransferase, group 1 family protein
PAMFEDIP_00468	1.41e-285	pimB	2.4.1.337	GT4	M	ko:K19002	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000,ko01003	Glycosyltransferase, group 1 family protein
PAMFEDIP_00469	0.0	ptsI	2.7.3.9	-	G	ko:K08483	ko02060,map02060	ko00000,ko00001,ko01000,ko02000	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
PAMFEDIP_00470	1.24e-52	ptsH	-	-	G	ko:K11189	-	ko00000,ko02000	phosphocarrier protein HPR
PAMFEDIP_00471	5.6e-41	-	-	-	-	-	-	-	-
PAMFEDIP_00472	0.0	clpE	-	-	O	ko:K03697	-	ko00000,ko03110	Belongs to the ClpA ClpB family
PAMFEDIP_00473	3.29e-95	-	-	-	L	-	-	-	Integrase
PAMFEDIP_00474	3.4e-85	-	-	-	K	-	-	-	Winged helix DNA-binding domain
PAMFEDIP_00475	5.67e-231	oppF	-	-	P	ko:K10823	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
PAMFEDIP_00476	4.86e-258	oppD	-	-	P	ko:K15583	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
PAMFEDIP_00477	3.59e-241	oppC	-	-	EP	ko:K15582	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC-type dipeptide oligopeptide nickel transport systems, permease components
PAMFEDIP_00478	3.44e-210	oppB	-	-	P	ko:K15581	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC-type dipeptide oligopeptide nickel transport systems, permease components
PAMFEDIP_00479	0.0	oppA	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
PAMFEDIP_00480	3.85e-76	ywjH	-	-	S	-	-	-	Protein of unknown function (DUF1634)
PAMFEDIP_00481	1.01e-172	-	-	-	S	ko:K07090	-	ko00000	membrane transporter protein
PAMFEDIP_00482	1.36e-208	lysR5	-	-	K	-	-	-	LysR substrate binding domain
PAMFEDIP_00483	1.01e-250	-	-	-	M	-	-	-	MucBP domain
PAMFEDIP_00484	0.0	-	-	-	-	-	-	-	-
PAMFEDIP_00485	0.0	prfC	-	-	J	ko:K02837	-	ko00000,ko03012	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
PAMFEDIP_00486	0.0	gshR3	1.8.1.7	-	C	ko:K00383	ko00480,ko04918,map00480,map04918	ko00000,ko00001,ko01000	Glutathione reductase
PAMFEDIP_00487	1.22e-218	gntZ	1.1.1.343, 1.1.1.44	-	G	ko:K00033	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Dehydrogenase
PAMFEDIP_00488	0.0	gntK	2.7.1.12	-	G	ko:K00851	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko01000	Belongs to the FGGY kinase family
PAMFEDIP_00489	7.89e-290	gntP	-	-	EG	ko:K03299	-	ko00000,ko02000	Gluconate
PAMFEDIP_00490	6.04e-94	tagD	2.7.7.39	-	IM	ko:K00980	ko00564,map00564	ko00000,ko00001,ko01000	Glycerol-3-phosphate cytidylyltransferase
PAMFEDIP_00491	1.13e-257	yueF	-	-	S	-	-	-	AI-2E family transporter
PAMFEDIP_00492	7.3e-216	hdhL	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	Belongs to the LDH MDH superfamily
PAMFEDIP_00493	7.17e-39	-	-	-	S	-	-	-	Antitoxin component of a toxin-antitoxin (TA) module
PAMFEDIP_00494	3.97e-64	-	-	-	K	-	-	-	sequence-specific DNA binding
PAMFEDIP_00495	1.94e-170	lytE	-	-	M	-	-	-	NlpC/P60 family
PAMFEDIP_00496	6.62e-138	ygaC	-	-	J	ko:K07586	-	ko00000	Belongs to the UPF0374 family
PAMFEDIP_00497	1.01e-181	recX	-	-	S	ko:K03565	-	ko00000,ko03400	Regulatory protein RecX
PAMFEDIP_00498	1.34e-168	-	-	-	-	-	-	-	-
PAMFEDIP_00499	1.68e-131	-	-	-	K	-	-	-	DNA-templated transcription, initiation
PAMFEDIP_00500	3.31e-35	-	-	-	-	-	-	-	-
PAMFEDIP_00501	1.95e-41	-	-	-	-	-	-	-	-
PAMFEDIP_00502	1.04e-45	-	-	-	S	-	-	-	Protein of unknown function (DUF2922)
PAMFEDIP_00503	9.02e-70	-	-	-	-	-	-	-	-
PAMFEDIP_00505	3.98e-169	glpF	-	-	U	ko:K02440	-	ko00000,ko02000	Belongs to the MIP aquaporin (TC 1.A.8) family
PAMFEDIP_00506	1.95e-197	rbn	-	-	S	ko:K07058	-	ko00000	Belongs to the UPF0761 family
PAMFEDIP_00507	3.34e-267	mnaA	5.1.3.14	-	G	ko:K01791	ko00520,ko01100,ko05111,map00520,map01100,map05111	ko00000,ko00001,ko00002,ko01000,ko01005	Belongs to the UDP-N-acetylglucosamine 2-epimerase family
PAMFEDIP_00508	3.3e-281	pbpX	-	-	V	-	-	-	Beta-lactamase
PAMFEDIP_00509	0.0	gdhA	1.4.1.4	-	E	ko:K00262	ko00220,ko00250,ko00910,ko01100,map00220,map00250,map00910,map01100	ko00000,ko00001,ko01000	Belongs to the Glu Leu Phe Val dehydrogenases family
PAMFEDIP_00510	8.31e-139	-	-	-	-	-	-	-	-
PAMFEDIP_00511	7.62e-97	-	-	-	-	-	-	-	-
PAMFEDIP_00513	3.21e-209	-	-	-	S	-	-	-	Alpha/beta hydrolase of unknown function (DUF915)
PAMFEDIP_00514	3.15e-313	pts14C	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PAMFEDIP_00515	3.93e-99	-	-	-	T	-	-	-	Universal stress protein family
PAMFEDIP_00517	5.62e-316	yfmL	-	-	L	-	-	-	DEAD DEAH box helicase
PAMFEDIP_00518	7.89e-245	mocA	-	-	S	-	-	-	Oxidoreductase
PAMFEDIP_00519	6.22e-43	cspP	-	-	K	ko:K03704	-	ko00000,ko03000	'Cold-shock' DNA-binding domain
PAMFEDIP_00520	7.34e-83	-	-	-	S	-	-	-	Domain of unknown function (DUF4828)
PAMFEDIP_00521	2.22e-185	lys	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
PAMFEDIP_00522	5.63e-196	gntR	-	-	K	-	-	-	rpiR family
PAMFEDIP_00523	2.87e-215	-	-	-	S	-	-	-	Alpha/beta hydrolase of unknown function (DUF915)
PAMFEDIP_00524	7.06e-307	pts13C	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PAMFEDIP_00525	0.0	yfgQ	-	-	P	ko:K12952	-	ko00000,ko01000	E1-E2 ATPase
PAMFEDIP_00526	2.26e-129	yobS	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PAMFEDIP_00527	0.0	rumA_2	2.1.1.190	-	J	ko:K03215	-	ko00000,ko01000,ko03009	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PAMFEDIP_00528	1.59e-242	dagK	2.7.1.107	-	G	ko:K07029	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko01000	Lipid kinase
PAMFEDIP_00529	0.0	gatB	6.3.5.6, 6.3.5.7	-	J	ko:K02434	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PAMFEDIP_00530	0.0	gatA	6.3.5.6, 6.3.5.7	-	J	ko:K02433	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
PAMFEDIP_00531	5.11e-67	gatC	6.3.5.6, 6.3.5.7	-	J	ko:K02435	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PAMFEDIP_00532	9.48e-263	camS	-	-	S	-	-	-	sex pheromone
PAMFEDIP_00533	0.0	ligA	6.5.1.2	-	L	ko:K01972	ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430	ko00000,ko00001,ko01000,ko03032,ko03400	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
PAMFEDIP_00534	0.0	pcrA	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	ATP-dependent DNA helicase
PAMFEDIP_00535	1.39e-279	purK2	6.3.4.18	-	F	ko:K01589	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
PAMFEDIP_00536	1.13e-120	yebE	-	-	S	-	-	-	UPF0316 protein
PAMFEDIP_00537	2.01e-134	xpt	2.4.2.22	-	F	ko:K03816	ko00230,ko01100,ko01110,map00230,map01100,map01110	ko00000,ko00001,ko01000	Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
PAMFEDIP_00538	1.97e-145	acmA	3.2.1.17, 3.2.1.96	-	NU	ko:K01185,ko:K01227	ko00511,map00511	ko00000,ko00001,ko01000	mannosyl-glycoprotein
PAMFEDIP_00539	7.78e-235	-	-	-	S	-	-	-	Oxidoreductase family, NAD-binding Rossmann fold
PAMFEDIP_00540	0.0	-	-	-	P	-	-	-	Sodium:sulfate symporter transmembrane region
PAMFEDIP_00541	0.0	astA	2.8.2.22	-	M	ko:K01023	-	ko00000,ko01000	Arylsulfotransferase Ig-like domain
PAMFEDIP_00542	2.54e-225	nrnA	3.1.13.3, 3.1.3.7	-	S	ko:K06881	ko00920,ko01100,ko01120,map00920,map01100,map01120	ko00000,ko00001,ko01000,ko03400	DHHA1 domain
PAMFEDIP_00543	3.72e-145	cysC	2.7.1.25	-	F	ko:K00860	ko00230,ko00920,ko01100,ko01120,map00230,map00920,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Catalyzes the synthesis of activated sulfate
PAMFEDIP_00544	7.32e-292	sat	2.7.7.4	-	H	ko:K00958	ko00230,ko00261,ko00450,ko00920,ko01100,ko01120,ko01130,map00230,map00261,map00450,map00920,map01100,map01120,map01130	ko00000,ko00001,ko00002,ko01000	the enzyme from Thermus thermophilus is dimeric and binds a zinc ion that is coordinated by cysteine and histidine residues that are not found in all related proteins but is found in some thermophilic organisms
PAMFEDIP_00545	0.0	-	-	-	S	-	-	-	Protein conserved in bacteria
PAMFEDIP_00546	0.0	metE	2.1.1.14	-	E	ko:K00549	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
PAMFEDIP_00547	0.0	yitJ	1.5.1.20, 2.1.1.10	-	E	ko:K00297,ko:K00547	ko00270,ko00670,ko00720,ko01100,ko01110,ko01120,ko01200,ko01523,map00270,map00670,map00720,map01100,map01110,map01120,map01200,map01523	ko00000,ko00001,ko00002,ko01000	catalyzes the formation of 5,10-methylenetetrahydrofolate from 5-methyltetrahydrofolate and S-adenosyl-L-homocysteine and methionine from S-adenosyl-L-methionine and L-homocysteine
PAMFEDIP_00548	8.01e-77	-	-	-	S	-	-	-	Protein of unknown function (DUF1516)
PAMFEDIP_00549	4.91e-117	gtcA1	-	-	S	-	-	-	Teichoic acid glycosylation protein
PAMFEDIP_00550	3.89e-237	-	-	-	-	-	-	-	-
PAMFEDIP_00551	9.03e-16	-	-	-	-	-	-	-	-
PAMFEDIP_00552	4.29e-87	-	-	-	-	-	-	-	-
PAMFEDIP_00555	0.0	uvrA2	-	-	L	-	-	-	ABC transporter
PAMFEDIP_00556	7.12e-62	-	-	-	-	-	-	-	-
PAMFEDIP_00557	8.82e-119	-	-	-	-	-	-	-	-
PAMFEDIP_00558	2.2e-111	ohrR	-	-	K	ko:K18906	-	ko00000,ko00002,ko01504,ko03000	helix_turn_helix multiple antibiotic resistance protein
PAMFEDIP_00559	1.23e-145	XK27_07085	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
PAMFEDIP_00560	4.56e-78	-	-	-	-	-	-	-	-
PAMFEDIP_00561	5.37e-74	-	-	-	-	-	-	-	-
PAMFEDIP_00562	9.01e-179	agrA	-	-	K	ko:K07707	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko02022	LytTr DNA-binding domain
PAMFEDIP_00563	2.08e-283	pltK	2.7.13.3	-	T	ko:K07706	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	GHKL domain
PAMFEDIP_00564	7.83e-140	-	-	-	-	-	-	-	-
PAMFEDIP_00565	1.89e-189	-	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
PAMFEDIP_00566	9.36e-205	ydeD	-	-	EG	-	-	-	COG0697 Permeases of the drug metabolite transporter (DMT) superfamily
PAMFEDIP_00567	1.64e-151	-	-	-	GM	-	-	-	NAD(P)H-binding
PAMFEDIP_00568	5.2e-85	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
PAMFEDIP_00569	6.96e-198	mrsA1	1.8.4.11	-	O	ko:K07304	-	ko00000,ko01000	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PAMFEDIP_00571	2.57e-226	-	-	-	K	ko:K01990	-	ko00000,ko00002,ko02000	LytTr DNA-binding domain
PAMFEDIP_00572	3.06e-201	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter
PAMFEDIP_00573	3.34e-160	-	-	-	V	ko:K01992	-	ko00000,ko00002,ko02000	Transport permease protein
PAMFEDIP_00575	3e-315	XK27_06930	-	-	V	ko:K01421	-	ko00000	domain protein
PAMFEDIP_00576	3.55e-72	mscL	-	-	M	ko:K03282	-	ko00000,ko02000	Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
PAMFEDIP_00577	2.07e-155	dgk2	-	-	F	-	-	-	deoxynucleoside kinase
PAMFEDIP_00578	5.01e-229	ugpB	-	-	G	ko:K05813	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding protein
PAMFEDIP_00579	3.05e-193	ugpE	-	-	G	ko:K05815	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
PAMFEDIP_00580	1.13e-221	ugpA	-	-	U	ko:K02025,ko:K05814	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PAMFEDIP_00581	2.92e-258	ugpC	3.6.3.20	-	E	ko:K05816,ko:K10112	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Belongs to the ABC transporter superfamily
PAMFEDIP_00582	2.16e-109	-	-	-	T	-	-	-	Belongs to the universal stress protein A family
PAMFEDIP_00583	0.0	pepV	3.5.1.18	-	E	ko:K01270,ko:K01274,ko:K01439	ko00300,ko00480,ko01100,ko01120,ko01230,map00300,map00480,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000,ko01002	dipeptidase PepV
PAMFEDIP_00584	3.03e-193	nnrD	4.2.1.136, 5.1.99.6	-	H	ko:K17758,ko:K17759	-	ko00000,ko01000	Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
PAMFEDIP_00585	5.04e-176	rsuA	5.4.99.19	-	J	ko:K06183	-	ko00000,ko01000,ko03009	Belongs to the pseudouridine synthase RsuA family
PAMFEDIP_00586	0.0	ytgP	-	-	S	ko:K03328	-	ko00000	Polysaccharide biosynthesis protein
PAMFEDIP_00587	0.0	leuS	6.1.1.4	-	J	ko:K01869	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Belongs to the class-I aminoacyl-tRNA synthetase family
PAMFEDIP_00588	3.58e-161	yodM	3.6.1.27	-	I	ko:K19302	ko00550,map00550	ko00000,ko00001,ko01000,ko01011	Acid phosphatase homologues
PAMFEDIP_00589	3.03e-122	mraW1	-	-	J	-	-	-	Putative rRNA methylase
PAMFEDIP_00590	9.32e-40	-	-	-	-	-	-	-	-
PAMFEDIP_00591	0.0	tagE3	2.4.1.52	GT4	M	ko:K00712	-	ko00000,ko01000,ko01003	Glycosyl transferases group 1
PAMFEDIP_00592	0.0	tagE2	2.4.1.52	GT4	M	ko:K00712	-	ko00000,ko01000,ko01003	Glycosyl transferases group 1
PAMFEDIP_00593	0.0	-	-	-	S	-	-	-	Pfam Methyltransferase
PAMFEDIP_00594	3.21e-26	-	-	-	N	-	-	-	Cell shape-determining protein MreB
PAMFEDIP_00596	1.37e-60	-	-	-	N	-	-	-	Cell shape-determining protein MreB
PAMFEDIP_00597	0.0	mdr	-	-	EGP	-	-	-	Major Facilitator
PAMFEDIP_00598	2.78e-273	metK	2.5.1.6	-	H	ko:K00789	ko00270,ko01100,ko01110,ko01230,map00270,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
PAMFEDIP_00599	3.35e-157	-	-	-	-	-	-	-	-
PAMFEDIP_00600	0.0	-	2.4.1.52	GT4	M	ko:K00712	-	ko00000,ko01000,ko01003	Glycosyl transferases group 1
PAMFEDIP_00601	2.75e-216	mmuM	2.1.1.10	-	H	ko:K00547	ko00270,ko01100,ko01110,map00270,map01100,map01110	ko00000,ko00001,ko01000	homocysteine S-methyltransferase
PAMFEDIP_00602	0.0	ybgF	-	-	E	ko:K02205,ko:K03293,ko:K16235,ko:K16236	-	ko00000,ko02000	amino acid
PAMFEDIP_00603	6.21e-241	hemH	4.99.1.1, 4.99.1.9	-	H	ko:K01772	ko00860,ko01100,ko01110,map00860,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the ferrous insertion into protoporphyrin IX
PAMFEDIP_00604	2.19e-291	mntH	-	-	P	ko:K03322	-	ko00000,ko02000	H( )-stimulated, divalent metal cation uptake system
PAMFEDIP_00606	3.47e-134	prpA3	3.1.3.16	-	T	ko:K01090	-	ko00000,ko01000	Calcineurin-like phosphoesterase superfamily domain
PAMFEDIP_00607	2.98e-46	prpA3	3.1.3.16	-	T	ko:K01090	-	ko00000,ko01000	Calcineurin-like phosphoesterase superfamily domain
PAMFEDIP_00608	1.58e-122	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
PAMFEDIP_00609	1.25e-124	-	-	-	-	-	-	-	-
PAMFEDIP_00610	6.36e-237	-	-	-	P	ko:K06901	-	ko00000,ko02000	secondary active sulfate transmembrane transporter activity
PAMFEDIP_00611	3.26e-119	-	2.4.2.7	-	F	ko:K00759	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000,ko04147	Phosphoribosyl transferase domain
PAMFEDIP_00620	5.61e-39	cbh	3.5.1.24	-	M	ko:K01442	ko00120,ko00121,ko01100,map00120,map00121,map01100	ko00000,ko00001,ko01000	Linear amide C-N hydrolase, choloylglycine hydrolase family protein
PAMFEDIP_00621	5.44e-159	-	-	-	T	-	-	-	EAL domain
PAMFEDIP_00622	8.04e-190	-	3.1.3.23	-	S	ko:K07757	-	ko00000,ko01000	Sucrose-6F-phosphate phosphohydrolase
PAMFEDIP_00623	1.21e-135	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PAMFEDIP_00624	1.46e-263	galM	5.1.3.3	-	G	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the interconversion of alpha and beta anomers of maltose
PAMFEDIP_00625	3.38e-70	-	-	-	-	-	-	-	-
PAMFEDIP_00626	2.49e-95	-	-	-	-	-	-	-	-
PAMFEDIP_00627	2.87e-168	nfrA	1.5.1.38	-	C	ko:K19285	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	nitroreductase
PAMFEDIP_00628	7.08e-197	-	-	-	G	ko:K08217	-	br01600,ko00000,ko01504,ko02000	Transmembrane secretion effector
PAMFEDIP_00629	0.0	glpK	2.7.1.30	-	F	ko:K00864	ko00561,ko01100,ko03320,ko04626,map00561,map01100,map03320,map04626	ko00000,ko00001,ko01000,ko04147	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
PAMFEDIP_00630	6.37e-186	-	-	-	-	-	-	-	-
PAMFEDIP_00632	5.45e-94	spx1	-	-	P	ko:K16509	-	ko00000	ArsC family
PAMFEDIP_00633	3.88e-46	-	-	-	-	-	-	-	-
PAMFEDIP_00634	1.71e-116	-	-	-	V	-	-	-	VanZ like family
PAMFEDIP_00635	3.49e-315	-	-	-	EGP	-	-	-	Major Facilitator
PAMFEDIP_00636	4.45e-226	ppx	3.6.1.11, 3.6.1.40	-	FP	ko:K01524	ko00230,map00230	ko00000,ko00001,ko01000	exopolyphosphatase
PAMFEDIP_00637	0.0	ppk	2.7.4.1	-	P	ko:K00937	ko00190,ko03018,map00190,map03018	ko00000,ko00001,ko01000,ko03019	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
PAMFEDIP_00638	0.0	ppx3	3.6.1.11, 3.6.1.40	-	FP	ko:K01524	ko00230,map00230	ko00000,ko00001,ko01000	exopolyphosphatase
PAMFEDIP_00639	7.8e-196	licD	-	-	M	ko:K07271	-	ko00000,ko01000	LicD family
PAMFEDIP_00640	3.68e-107	-	-	-	K	-	-	-	Transcriptional regulator
PAMFEDIP_00641	1.36e-27	-	-	-	-	-	-	-	-
PAMFEDIP_00642	1.79e-287	pbuG	-	-	S	ko:K06901	-	ko00000,ko02000	permease
PAMFEDIP_00643	0.0	pox1	1.2.3.3	-	EH	ko:K00158	ko00620,ko01100,map00620,map01100	ko00000,ko00001,ko01000	Belongs to the TPP enzyme family
PAMFEDIP_00644	5.47e-198	ribC1	2.7.1.26, 2.7.7.2	-	H	ko:K11753	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Belongs to the ribF family
PAMFEDIP_00645	0.0	pox2	1.2.3.3	-	EH	ko:K00158	ko00620,ko01100,map00620,map01100	ko00000,ko00001,ko01000	Belongs to the TPP enzyme family
PAMFEDIP_00646	3.45e-231	pepR	3.4.11.5	-	E	ko:K01259	ko00330,map00330	ko00000,ko00001,ko01000,ko01002	Releases the N-terminal proline from various substrates
PAMFEDIP_00647	5.01e-229	birA	6.3.4.15	-	H	ko:K03524	ko00780,ko01100,map00780,map01100	ko00000,ko00001,ko01000,ko03000	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
PAMFEDIP_00648	0.0	oatA	-	-	I	-	-	-	Acyltransferase
PAMFEDIP_00649	0.0	pepX	3.4.14.11	-	E	ko:K01281	-	ko00000,ko01000,ko01002	Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
PAMFEDIP_00650	1.55e-89	-	-	-	O	-	-	-	OsmC-like protein
PAMFEDIP_00651	3.8e-61	-	-	-	-	-	-	-	-
PAMFEDIP_00652	0.0	yhdG	-	-	E	ko:K03294	-	ko00000	Amino Acid
PAMFEDIP_00653	6.12e-115	-	-	-	-	-	-	-	-
PAMFEDIP_00654	1.23e-189	pdxK	2.7.1.35	-	H	ko:K00868	ko00750,ko01100,map00750,map01100	ko00000,ko00001,ko01000	Phosphomethylpyrimidine kinase
PAMFEDIP_00655	7.48e-96	-	-	-	F	-	-	-	Nudix hydrolase
PAMFEDIP_00656	1.48e-27	-	-	-	-	-	-	-	-
PAMFEDIP_00657	2.45e-134	gmk2	2.7.4.8	-	F	ko:K00942	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko00002,ko01000	Guanylate kinase
PAMFEDIP_00658	2.02e-106	zur	-	-	P	ko:K02076,ko:K03711	-	ko00000,ko03000	Belongs to the Fur family
PAMFEDIP_00659	8.84e-18	-	3.2.1.14	GH18	-	ko:K01183	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	-
PAMFEDIP_00660	1.01e-188	-	-	-	-	-	-	-	-
PAMFEDIP_00661	1.94e-95	gph1	3.1.3.18	-	S	ko:K01091	ko00630,ko01100,ko01110,ko01130,map00630,map01100,map01110,map01130	ko00000,ko00001,ko01000	HAD hydrolase, family IA, variant
PAMFEDIP_00662	1.05e-234	aspC	2.6.1.57	-	E	ko:K00832,ko:K00841	ko00270,ko00300,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01230,map00270,map00300,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase
PAMFEDIP_00663	2.07e-217	ldhD	1.1.1.28	-	CH	ko:K03778	ko00620,ko01120,map00620,map01120	ko00000,ko00001,ko01000	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PAMFEDIP_00664	1.28e-54	-	-	-	-	-	-	-	-
PAMFEDIP_00666	2.3e-172	glnQ	-	-	E	ko:K10041	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
PAMFEDIP_00667	3.39e-190	glnH	-	-	ET	ko:K10039	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
PAMFEDIP_00668	3.14e-140	glnM	-	-	P	ko:K10040	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
PAMFEDIP_00669	1.27e-141	glnP	-	-	P	ko:K10040	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
PAMFEDIP_00670	7.04e-108	-	-	-	G	ko:K02777	ko00010,ko00500,ko00520,ko02026,ko02060,ko05111,map00010,map00500,map00520,map02026,map02060,map05111	ko00000,ko00001,ko00002,ko01000,ko02000	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
PAMFEDIP_00671	7.77e-197	-	-	-	K	ko:K03488	-	ko00000,ko03000	CAT RNA binding domain
PAMFEDIP_00672	0.0	-	-	-	G	ko:K02755,ko:K02756,ko:K02757	ko02060,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system, EIIB
PAMFEDIP_00673	4.87e-180	-	3.5.1.105	-	G	ko:K03478	-	ko00000,ko01000	YdjC-like protein
PAMFEDIP_00674	9.38e-317	steT	-	-	E	ko:K03294	-	ko00000	amino acid
PAMFEDIP_00675	6.26e-96	-	-	-	K	-	-	-	helix_turn_helix multiple antibiotic resistance protein
PAMFEDIP_00676	8.87e-191	-	-	-	S	-	-	-	Sulfite exporter TauE/SafE
PAMFEDIP_00677	7.26e-92	-	-	-	K	-	-	-	MarR family
PAMFEDIP_00678	3.22e-269	-	-	-	EGP	-	-	-	Major Facilitator Superfamily
PAMFEDIP_00679	2.93e-109	-	-	-	S	ko:K07090	-	ko00000	membrane transporter protein
PAMFEDIP_00680	1.81e-128	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PAMFEDIP_00681	5.95e-300	hflX	-	-	S	ko:K03665	-	ko00000,ko03009	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
PAMFEDIP_00682	4.6e-102	rppH3	-	-	F	-	-	-	NUDIX domain
PAMFEDIP_00683	3.5e-64	sugE	-	-	U	ko:K11741	-	ko00000,ko02000	Multidrug resistance protein
PAMFEDIP_00684	1.61e-36	-	-	-	-	-	-	-	-
PAMFEDIP_00685	1.35e-165	pgm3	-	-	G	-	-	-	Phosphoglycerate mutase family
PAMFEDIP_00686	2.07e-161	gpm2	-	-	G	-	-	-	Phosphoglycerate mutase family
PAMFEDIP_00687	0.0	yjbQ	-	-	P	ko:K03455,ko:K03499	-	ko00000,ko02000	TrkA C-terminal domain protein
PAMFEDIP_00688	4.16e-227	-	3.6.1.55	-	F	ko:K03574	-	ko00000,ko01000,ko03400	Belongs to the Nudix hydrolase family
PAMFEDIP_00689	4.51e-143	-	-	-	S	ko:K03975	-	ko00000	SNARE associated Golgi protein
PAMFEDIP_00690	0.0	helD	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	DNA helicase
PAMFEDIP_00691	8.45e-211	fabK	1.3.1.9	-	S	ko:K02371	ko00061,ko01100,ko01212,map00061,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Nitronate monooxygenase
PAMFEDIP_00692	1.22e-227	coaA	2.7.1.33	-	F	ko:K00867	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Pantothenic acid kinase
PAMFEDIP_00693	0.0	guaA	6.3.5.2	-	F	ko:K01951	ko00230,ko00983,ko01100,map00230,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko01002	Catalyzes the synthesis of GMP from XMP
PAMFEDIP_00697	7.98e-80	-	-	-	M	-	-	-	Lysin motif
PAMFEDIP_00698	4.75e-157	-	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
PAMFEDIP_00699	1.13e-171	-	-	-	V	ko:K07052	-	ko00000	CAAX protease self-immunity
PAMFEDIP_00700	4.87e-156	vex2	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter
PAMFEDIP_00701	4.32e-294	vex3	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	MacB-like periplasmic core domain
PAMFEDIP_00702	0.0	-	-	-	S	-	-	-	Leucine-rich repeat (LRR) protein
PAMFEDIP_00703	1.96e-137	tag	3.2.2.20	-	L	ko:K01246	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	glycosylase
PAMFEDIP_00704	0.0	ydgH	-	-	S	ko:K06994	-	ko00000	MMPL family
PAMFEDIP_00705	1.17e-135	-	-	-	K	-	-	-	transcriptional regulator
PAMFEDIP_00706	2.04e-158	ywaC	2.7.6.5	-	S	ko:K00951,ko:K07816	ko00230,map00230	ko00000,ko00001,ko01000	RelA SpoT domain protein
PAMFEDIP_00707	1.49e-63	-	-	-	-	-	-	-	-
PAMFEDIP_00708	0.0	loxD	1.1.3.15	-	C	ko:K00104	ko00630,ko01100,ko01110,ko01120,ko01130,map00630,map01100,map01110,map01120,map01130	ko00000,ko00001,ko01000	FAD linked oxidases, C-terminal domain
PAMFEDIP_00709	5.06e-236	brpA	-	-	K	-	-	-	Cell envelope-like function transcriptional attenuator common domain protein
PAMFEDIP_00710	2.87e-56	-	-	-	-	-	-	-	-
PAMFEDIP_00711	1.6e-73	-	-	-	-	-	-	-	-
PAMFEDIP_00712	6.86e-311	licC	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PAMFEDIP_00713	2.78e-167	yidA	-	-	K	-	-	-	Helix-turn-helix domain, rpiR family
PAMFEDIP_00714	9.86e-65	-	-	-	-	-	-	-	-
PAMFEDIP_00715	2.58e-163	rrp2	-	-	K	-	-	-	Transcriptional regulatory protein, C terminal
PAMFEDIP_00716	1.72e-315	hpk2	-	-	T	-	-	-	Histidine kinase
PAMFEDIP_00717	2.2e-86	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
PAMFEDIP_00718	0.0	ydiC	-	-	EGP	-	-	-	Major Facilitator
PAMFEDIP_00719	3.13e-55	-	-	-	-	-	-	-	-
PAMFEDIP_00720	6.37e-52	-	-	-	-	-	-	-	-
PAMFEDIP_00721	4.5e-150	-	-	-	-	-	-	-	-
PAMFEDIP_00722	4.02e-301	mntH	-	-	P	ko:K03322	-	ko00000,ko02000	H( )-stimulated, divalent metal cation uptake system
PAMFEDIP_00723	8.62e-155	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PAMFEDIP_00724	8.9e-96	ywnA	-	-	K	-	-	-	Transcriptional regulator
PAMFEDIP_00725	2.73e-92	-	-	-	-	-	-	-	-
PAMFEDIP_00726	3.37e-129	ubiX	2.5.1.129	-	H	ko:K03186	ko00130,ko00627,ko00940,ko01100,ko01110,ko01120,ko01220,map00130,map00627,map00940,map01100,map01110,map01120,map01220	ko00000,ko00001,ko00002,ko01000	Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN
PAMFEDIP_00727	0.0	tagF2	2.7.8.12	-	H	ko:K09809	-	ko00000,ko01000	CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
PAMFEDIP_00728	5.71e-306	tagB	2.7.8.12, 2.7.8.45	-	M	ko:K09809,ko:K21591	-	ko00000,ko01000	glycerophosphotransferase
PAMFEDIP_00729	1.21e-94	tagD	2.7.7.15, 2.7.7.39	-	IM	ko:K00968,ko:K00980	ko00440,ko00564,ko01100,ko05231,map00440,map00564,map01100,map05231	ko00000,ko00001,ko00002,ko01000	Glycerol-3-phosphate cytidylyltransferase
PAMFEDIP_00730	2.6e-185	-	-	-	-	-	-	-	-
PAMFEDIP_00731	0.0	pts5ABC	-	-	G	ko:K02755,ko:K02756,ko:K02757	ko02060,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system, EIIB
PAMFEDIP_00732	0.0	pts4ABC	-	-	G	ko:K02755,ko:K02756,ko:K02757	ko02060,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
PAMFEDIP_00733	0.0	treC	3.2.1.93	GH13	G	ko:K01226	ko00500,map00500	ko00000,ko00001,ko01000	Alpha amylase, catalytic domain protein
PAMFEDIP_00734	1.68e-166	treR	-	-	K	ko:K03486	-	ko00000,ko03000	UTRA
PAMFEDIP_00735	6.35e-56	-	-	-	-	-	-	-	-
PAMFEDIP_00736	7.55e-58	-	-	-	S	-	-	-	Protein of unknown function (DUF2089)
PAMFEDIP_00737	1.27e-181	pnuC	-	-	H	ko:K03811	-	ko00000,ko02000	nicotinamide mononucleotide transporter
PAMFEDIP_00738	6.72e-203	map	3.4.11.18	-	E	ko:K01265	-	ko00000,ko01000,ko01002	Methionine Aminopeptidase
PAMFEDIP_00739	2.52e-209	mccA	2.5.1.134, 2.5.1.47	-	E	ko:K01738,ko:K17216	ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the cysteine synthase cystathionine beta- synthase family
PAMFEDIP_00740	7.87e-266	mccB	4.4.1.1, 4.4.1.2, 4.4.1.8	-	E	ko:K01760,ko:K17217	ko00260,ko00270,ko00450,ko00920,ko01100,ko01110,ko01130,ko01230,map00260,map00270,map00450,map00920,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	cystathionine
PAMFEDIP_00741	2.13e-124	cysE	2.3.1.30	-	E	ko:K00640	ko00270,ko00920,ko01100,ko01110,ko01120,ko01200,ko01230,ko05111,map00270,map00920,map01100,map01110,map01120,map01200,map01230,map05111	ko00000,ko00001,ko00002,ko01000	Bacterial transferase hexapeptide (six repeats)
PAMFEDIP_00742	1.82e-126	-	-	-	S	ko:K19784	-	ko00000	NADPH-dependent FMN reductase
PAMFEDIP_00743	0.0	-	-	-	S	ko:K13730	ko05100,map05100	ko00000,ko00001	Uncharacterized protein conserved in bacteria (DUF2252)
PAMFEDIP_00744	2.41e-106	ndk	2.7.4.6	-	F	ko:K00940	ko00230,ko00240,ko00983,ko01100,ko01110,ko01130,ko04016,map00230,map00240,map00983,map01100,map01110,map01130,map04016	ko00000,ko00001,ko00002,ko01000,ko04131	Belongs to the NDK family
PAMFEDIP_00745	1.73e-89	-	-	-	-	-	-	-	-
PAMFEDIP_00746	2.37e-123	-	-	-	-	-	-	-	-
PAMFEDIP_00747	5.92e-67	-	-	-	-	-	-	-	-
PAMFEDIP_00748	4.81e-76	trxA	-	-	O	ko:K03671	ko04621,ko05418,map04621,map05418	ko00000,ko00001,ko03110	Belongs to the thioredoxin family
PAMFEDIP_00749	1.21e-111	-	-	-	-	-	-	-	-
PAMFEDIP_00750	1.76e-280	mtlD	1.1.1.17	-	C	ko:K00009	ko00051,map00051	ko00000,ko00001,ko01000	mannitol-1-phosphate 5-dehydrogenase activity
PAMFEDIP_00751	5.33e-103	mtlF	2.7.1.197	-	G	ko:K02798	ko00051,ko02060,map00051,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PAMFEDIP_00752	0.0	mtlR	-	-	K	ko:K03483	-	ko00000,ko03000	Mga helix-turn-helix domain
PAMFEDIP_00753	0.0	mtlA	2.7.1.197	-	G	ko:K02799,ko:K02800	ko00051,ko02060,map00051,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
PAMFEDIP_00754	0.0	pepD1	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
PAMFEDIP_00755	7.02e-126	-	-	-	K	-	-	-	Helix-turn-helix domain
PAMFEDIP_00756	3.91e-283	-	-	-	C	-	-	-	FAD dependent oxidoreductase
PAMFEDIP_00757	1.82e-220	-	-	-	P	-	-	-	Major Facilitator Superfamily
PAMFEDIP_00758	3.16e-170	nagB	3.5.99.6	-	G	ko:K02564	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
PAMFEDIP_00759	2.32e-43	ygzD	-	-	K	ko:K07729	-	ko00000,ko03000	Transcriptional
PAMFEDIP_00760	1.2e-91	-	-	-	-	-	-	-	-
PAMFEDIP_00761	1.05e-101	greA	-	-	K	ko:K03624	-	ko00000,ko03021	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PAMFEDIP_00762	5.3e-202	dkgB	-	-	S	-	-	-	reductase
PAMFEDIP_00763	6.07e-117	gpo	1.11.1.9	-	O	ko:K00432	ko00480,ko00590,ko04918,map00480,map00590,map04918	ko00000,ko00001,ko01000	Belongs to the glutathione peroxidase family
PAMFEDIP_00764	2.02e-131	-	-	-	S	ko:K16925	-	ko00000,ko00002,ko02000	ABC transporter permease
PAMFEDIP_00765	0.0	-	-	-	P	ko:K16786,ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter
PAMFEDIP_00766	1.5e-150	ykoC	-	-	P	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	cobalt transport
PAMFEDIP_00767	0.0	lysS	6.1.1.6	-	J	ko:K04567	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-II aminoacyl-tRNA synthetase family
PAMFEDIP_00768	5.33e-243	dus	-	-	J	ko:K05540	-	ko00000,ko01000,ko03016	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PAMFEDIP_00769	1.93e-209	hslO	-	-	O	ko:K04083	-	ko00000,ko03110	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
PAMFEDIP_00770	0.0	ftsH	-	-	O	ko:K03798	-	ko00000,ko00002,ko01000,ko01002,ko03110	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
PAMFEDIP_00771	6.1e-124	hpt	2.4.2.8	-	F	ko:K00760	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the purine pyrimidine phosphoribosyltransferase family
PAMFEDIP_00772	0.0	tilS	2.4.2.8, 6.3.4.19	-	J	ko:K04075,ko:K15780	ko00230,ko01100,ko01110,map00230,map01100,map01110	ko00000,ko00001,ko01000,ko03016	Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
PAMFEDIP_00773	1.07e-103	yabR	-	-	J	ko:K07571	-	ko00000	RNA binding
PAMFEDIP_00774	2.02e-83	divIC	-	-	D	ko:K13052	-	ko00000,ko03036	Septum formation initiator
PAMFEDIP_00776	7.72e-57	yabO	-	-	J	-	-	-	S4 domain protein
PAMFEDIP_00777	0.0	yabM	-	-	S	ko:K03328	-	ko00000	Polysaccharide biosynthesis protein
PAMFEDIP_00778	0.0	mfd	-	-	L	ko:K03723	ko03420,map03420	ko00000,ko00001,ko01000,ko03400	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
PAMFEDIP_00779	1.43e-129	pth	3.1.1.29	-	J	ko:K01056	-	ko00000,ko01000,ko03012	The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
PAMFEDIP_00780	2.79e-226	ldh	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	Belongs to the LDH MDH superfamily. LDH family
PAMFEDIP_00781	0.0	-	-	-	S	-	-	-	Putative peptidoglycan binding domain
PAMFEDIP_00782	1.4e-147	-	-	-	S	-	-	-	(CBS) domain
PAMFEDIP_00783	1.3e-110	queT	-	-	S	-	-	-	QueT transporter
PAMFEDIP_00784	1.52e-240	argF	2.1.3.3	-	E	ko:K00611	ko00220,ko01100,ko01110,ko01130,ko01230,map00220,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
PAMFEDIP_00785	3.52e-273	argD	2.6.1.11, 2.6.1.17	-	E	ko:K00821	ko00220,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00220,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	acetylornithine
PAMFEDIP_00786	2.36e-166	argB	2.7.2.8	-	F	ko:K00930	ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the acetylglutamate kinase family. ArgB subfamily
PAMFEDIP_00787	2.29e-292	argJ	2.3.1.1, 2.3.1.35	-	E	ko:K00620	ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
PAMFEDIP_00788	8.87e-245	argC	1.2.1.38	-	E	ko:K00145	ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
PAMFEDIP_00789	7.48e-260	carA	6.3.5.5	-	F	ko:K01956	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthetase glutamine chain
PAMFEDIP_00790	0.0	carB	6.3.5.5	-	F	ko:K01955	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthase
PAMFEDIP_00791	5.79e-171	ytlC	3.6.3.36	-	P	ko:K02049,ko:K10831,ko:K15555	ko00920,ko02010,map00920,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATPases associated with a variety of cellular activities
PAMFEDIP_00792	3.03e-202	-	-	-	U	ko:K02050	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PAMFEDIP_00793	1.37e-248	-	-	-	P	ko:K02051	-	ko00000,ko00002,ko02000	ABC transporter, substratebinding protein
PAMFEDIP_00794	0.0	kup	-	-	P	ko:K03549	-	ko00000,ko02000	Transport of potassium into the cell
PAMFEDIP_00795	2.58e-85	ndoA	-	-	L	ko:K07171	-	ko00000,ko01000,ko02048	Toxic component of a toxin-antitoxin (TA) module
PAMFEDIP_00796	4.79e-273	alr	5.1.1.1	-	E	ko:K01775	ko00473,ko01100,ko01502,map00473,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
PAMFEDIP_00797	9.32e-81	acpS	2.7.8.7	-	I	ko:K00997	ko00770,map00770	ko00000,ko00001,ko01000	Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
PAMFEDIP_00798	0.0	cshA	3.6.4.13	-	F	ko:K05592	ko03018,map03018	ko00000,ko00001,ko01000,ko03009,ko03019	DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
PAMFEDIP_00799	0.0	murF	6.3.2.10	-	M	ko:K01929	ko00300,ko00550,ko01100,ko01502,map00300,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
PAMFEDIP_00800	1.84e-189	-	-	-	-	-	-	-	-
PAMFEDIP_00801	1.6e-194	htpX	-	-	O	ko:K03799	-	ko00000,ko00002,ko01000,ko01002	Belongs to the peptidase M48B family
PAMFEDIP_00802	5.35e-121	lemA	-	-	S	ko:K03744	-	ko00000	LemA family
PAMFEDIP_00803	3.14e-164	srtA	3.4.22.70	-	M	ko:K07284	-	ko00000,ko01000,ko01002,ko01011	sortase family
PAMFEDIP_00804	2.57e-274	-	-	-	J	-	-	-	translation release factor activity
PAMFEDIP_00805	1.91e-55	rpmE2	-	-	J	ko:K02909	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L31
PAMFEDIP_00806	1.26e-305	rho	-	-	K	ko:K03628	ko03018,map03018	ko00000,ko00001,ko03019,ko03021	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
PAMFEDIP_00807	1.71e-301	murA	2.5.1.7	-	M	ko:K00790	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PAMFEDIP_00808	4.01e-36	-	-	-	-	-	-	-	-
PAMFEDIP_00809	6.59e-170	-	-	-	S	-	-	-	YheO-like PAS domain
PAMFEDIP_00810	2.81e-202	sdaAA	4.3.1.17	-	E	ko:K01752	ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230	ko00000,ko00001,ko01000	L-serine dehydratase, iron-sulfur-dependent, alpha subunit
PAMFEDIP_00811	7.51e-159	sdhB	4.3.1.17	-	E	ko:K01752	ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230	ko00000,ko00001,ko01000	Serine dehydratase beta chain
PAMFEDIP_00812	2.28e-290	sdaC	-	-	E	ko:K03837	-	ko00000,ko02000	amino acid
PAMFEDIP_00813	5.84e-312	serS	6.1.1.11	-	J	ko:K01875	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
PAMFEDIP_00814	0.0	pyrG	6.3.4.2	-	F	ko:K01937	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
PAMFEDIP_00815	2.96e-89	rpoE	-	-	K	ko:K03048	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko03021,ko03400	Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
PAMFEDIP_00816	2.87e-101	ywiB	-	-	S	-	-	-	Domain of unknown function (DUF1934)
PAMFEDIP_00817	1.14e-202	lipL	2.3.1.200, 2.3.1.204	-	H	ko:K16869,ko:K18821	-	ko00000,ko01000	biotin lipoate A B protein ligase
PAMFEDIP_00818	0.0	ywfO	-	-	S	ko:K06885	-	ko00000	HD domain protein
PAMFEDIP_00819	4.15e-191	yxeH	-	-	S	-	-	-	hydrolase
PAMFEDIP_00820	1.97e-110	-	-	-	S	-	-	-	Pfam:DUF3816
PAMFEDIP_00821	1.21e-306	tyrS	6.1.1.1	-	J	ko:K01866	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
PAMFEDIP_00822	1.27e-143	-	-	-	-	-	-	-	-
PAMFEDIP_00823	1.08e-229	-	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
PAMFEDIP_00824	3.84e-185	-	-	-	S	-	-	-	Peptidase_C39 like family
PAMFEDIP_00825	1.04e-120	-	-	-	S	-	-	-	Protein of unknown function (DUF1694)
PAMFEDIP_00826	3.38e-150	-	-	-	S	ko:K07150	-	ko00000	Protein of unknown function (DUF554)
PAMFEDIP_00827	9.38e-189	-	-	-	KT	-	-	-	helix_turn_helix, mercury resistance
PAMFEDIP_00828	3.41e-295	gltT	-	-	U	ko:K03309,ko:K11102	-	ko00000,ko02000	Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
PAMFEDIP_00829	1.86e-123	-	-	-	S	ko:K08996	-	ko00000	Protein of unknown function (DUF1440)
PAMFEDIP_00830	1.2e-240	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter permease
PAMFEDIP_00831	1.18e-155	-	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PAMFEDIP_00832	2.76e-117	-	-	-	T	ko:K16923	-	ko00000,ko00002,ko02000	phosphorelay sensor kinase activity
PAMFEDIP_00833	5.72e-238	iunH3	3.2.2.1	-	F	ko:K01239	ko00230,ko00760,ko01100,map00230,map00760,map01100	ko00000,ko00001,ko01000	Inosine-uridine preferring nucleoside hydrolase
PAMFEDIP_00834	3.55e-127	ywjB	-	-	H	-	-	-	RibD C-terminal domain
PAMFEDIP_00835	9.35e-257	napA	-	-	P	-	-	-	Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
PAMFEDIP_00836	7.1e-152	-	-	-	S	-	-	-	Membrane
PAMFEDIP_00837	2.11e-199	mleP3	-	-	S	ko:K07088	-	ko00000	Membrane transport protein
PAMFEDIP_00838	0.0	aspA	4.3.1.1	-	E	ko:K01744	ko00250,ko01100,map00250,map01100	ko00000,ko00001,ko01000	Fumarase C C-terminus
PAMFEDIP_00839	4.32e-261	-	-	-	EGP	-	-	-	Major Facilitator Superfamily
PAMFEDIP_00840	7.22e-163	-	3.8.1.2	-	S	ko:K01560	ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120	ko00000,ko00001,ko01000	Haloacid dehalogenase-like hydrolase
PAMFEDIP_00841	0.0	ycnB	-	-	U	-	-	-	Belongs to the major facilitator superfamily
PAMFEDIP_00842	4.03e-104	-	-	-	S	-	-	-	Domain of unknown function (DUF4811)
PAMFEDIP_00843	8.99e-133	ydaF	-	-	J	ko:K03817	-	ko00000,ko01000,ko03009	Acetyltransferase (GNAT) domain
PAMFEDIP_00844	2.17e-222	-	-	-	S	-	-	-	Conserved hypothetical protein 698
PAMFEDIP_00845	5.9e-194	rlrG	-	-	K	ko:K21900	-	ko00000,ko03000	Transcriptional regulator
PAMFEDIP_00846	0.0	tagE5	2.4.1.52	GT4	M	ko:K00712	-	ko00000,ko01000,ko01003	Poly(Glycerol-phosphate) alpha-glucosyltransferase
PAMFEDIP_00847	0.0	tagE6	2.4.1.52	GT4	M	ko:K00712	-	ko00000,ko01000,ko01003	Glycosyl transferases group 1
PAMFEDIP_00849	2.24e-78	-	-	-	M	-	-	-	LysM domain
PAMFEDIP_00850	6.5e-119	adaB	2.1.1.63	-	L	ko:K00567,ko:K10778,ko:K13531	-	ko00000,ko01000,ko03000,ko03400	Methyltransferase
PAMFEDIP_00851	1.65e-212	natA	-	-	S	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PAMFEDIP_00852	3.91e-269	natB	-	-	CP	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 family transporter protein
PAMFEDIP_00853	6.27e-166	-	-	-	S	-	-	-	Belongs to the short-chain dehydrogenases reductases (SDR) family
PAMFEDIP_00854	4.72e-72	cmd	4.1.1.44	-	S	ko:K01607	ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220	ko00000,ko00001,ko01000	Carboxymuconolactone decarboxylase family
PAMFEDIP_00855	4.77e-100	yphH	-	-	S	-	-	-	Cupin domain
PAMFEDIP_00856	5.19e-103	-	-	-	K	-	-	-	transcriptional regulator, MerR family
PAMFEDIP_00857	4.87e-298	dapE	3.5.1.18	-	E	ko:K01439	ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000	succinyl-diaminopimelate desuccinylase
PAMFEDIP_00858	0.0	ylbB	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter permease
PAMFEDIP_00859	1.74e-156	-	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PAMFEDIP_00861	1.19e-150	nth	4.2.99.18	-	L	ko:K10773	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
PAMFEDIP_00862	3.18e-141	thgA3	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	Maltose acetyltransferase
PAMFEDIP_00863	1.03e-150	lepB	3.4.21.89	-	U	ko:K03100	ko02024,ko03060,map02024,map03060	ko00000,ko00001,ko01000,ko01002	Belongs to the peptidase S26 family
PAMFEDIP_00865	4.86e-111	-	-	-	-	-	-	-	-
PAMFEDIP_00866	1.04e-110	yvbK	-	-	K	-	-	-	GNAT family
PAMFEDIP_00867	9.76e-50	-	-	-	-	-	-	-	-
PAMFEDIP_00868	2.81e-64	-	-	-	-	-	-	-	-
PAMFEDIP_00869	7.44e-143	pgm8	-	-	G	-	-	-	Histidine phosphatase superfamily (branch 1)
PAMFEDIP_00870	6.09e-83	-	-	-	S	-	-	-	Domain of unknown function (DUF4440)
PAMFEDIP_00871	1.51e-200	-	-	-	K	-	-	-	LysR substrate binding domain
PAMFEDIP_00872	1.52e-135	-	-	-	GM	-	-	-	NAD(P)H-binding
PAMFEDIP_00873	1.66e-247	adh2	1.1.1.1	-	E	ko:K00001	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	alcohol dehydrogenase
PAMFEDIP_00874	2.9e-194	-	-	-	IQ	-	-	-	Enoyl-(Acyl carrier protein) reductase
PAMFEDIP_00875	1.28e-45	-	-	-	-	-	-	-	-
PAMFEDIP_00876	2.1e-99	-	-	-	T	-	-	-	Belongs to the universal stress protein A family
PAMFEDIP_00877	2.09e-124	maa	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	Maltose O-acetyltransferase
PAMFEDIP_00878	1.76e-162	ysaA	3.1.3.5, 3.8.1.2	-	S	ko:K01560,ko:K07025,ko:K08723	ko00230,ko00240,ko00361,ko00625,ko00760,ko01100,ko01110,ko01120,map00230,map00240,map00361,map00625,map00760,map01100,map01110,map01120	ko00000,ko00001,ko01000	Haloacid dehalogenase-like hydrolase
PAMFEDIP_00879	1.03e-40	-	-	-	-	-	-	-	-
PAMFEDIP_00880	4.1e-223	-	-	-	P	ko:K03284	-	ko00000,ko02000	CorA-like Mg2+ transporter protein
PAMFEDIP_00881	3.22e-82	-	-	-	S	-	-	-	Protein of unknown function (DUF3397)
PAMFEDIP_00882	7.24e-101	mraZ	-	-	K	ko:K03925	-	ko00000	Belongs to the MraZ family
PAMFEDIP_00883	1.74e-224	rsmH	2.1.1.199	-	J	ko:K03438	-	ko00000,ko01000,ko03009	Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
PAMFEDIP_00884	7.01e-76	ftsL	-	-	D	-	-	-	Cell division protein FtsL
PAMFEDIP_00885	0.0	pbpX	-	-	M	ko:K08724,ko:K12552,ko:K12556	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01011	Penicillin-binding Protein
PAMFEDIP_00886	2.81e-231	mraY	2.7.8.13	-	M	ko:K01000	ko00550,ko01100,ko01502,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
PAMFEDIP_00887	0.0	murD	6.3.2.9	-	M	ko:K01925	ko00471,ko00550,ko01100,map00471,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
PAMFEDIP_00888	2.04e-252	murG	2.4.1.227	GT28	M	ko:K02563	ko00550,ko01100,ko01502,ko04112,map00550,map01100,map01502,map04112	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
PAMFEDIP_00889	2.34e-208	divIB	-	-	D	ko:K03589	ko04112,map04112	ko00000,ko00001,ko03036	Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
PAMFEDIP_00890	3.55e-312	ftsA	-	-	D	ko:K03590	ko04112,map04112	ko00000,ko00001,ko03036,ko04812	Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
PAMFEDIP_00891	9.39e-295	ftsZ	-	-	D	ko:K03531	ko04112,map04112	ko00000,ko00001,ko02048,ko03036,ko04812	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
PAMFEDIP_00892	1.56e-93	sepF	-	-	D	ko:K09772	-	ko00000,ko03036	Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
PAMFEDIP_00893	6.45e-49	ylmG	-	-	S	ko:K02221	-	ko00000,ko02044	YGGT family
PAMFEDIP_00894	2.06e-187	ylmH	-	-	S	-	-	-	S4 domain protein
PAMFEDIP_00895	6.52e-124	divIVA	-	-	D	ko:K04074	-	ko00000,ko03036	DivIVA domain protein
PAMFEDIP_00896	0.0	ileS	6.1.1.5	-	J	ko:K01870	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
PAMFEDIP_00897	3.46e-242	dapF	5.1.1.7	-	E	ko:K01778	ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
PAMFEDIP_00898	3.51e-125	nudF	3.6.1.13	-	L	ko:K01515	ko00230,map00230	ko00000,ko00001,ko01000	ADP-ribose pyrophosphatase
PAMFEDIP_00899	7.74e-47	-	-	-	-	-	-	-	-
PAMFEDIP_00900	5.85e-158	mtnN	3.2.2.9	-	E	ko:K01243	ko00270,ko01100,ko01230,map00270,map01100,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
PAMFEDIP_00901	8.09e-275	iscS	2.8.1.7	-	E	ko:K04487	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko02048,ko03016,ko03029	Aminotransferase class V
PAMFEDIP_00902	4.94e-75	XK27_04120	-	-	S	-	-	-	Putative amino acid metabolism
PAMFEDIP_00903	1.53e-284	mnmA	2.8.1.13	-	J	ko:K00566	ko04122,map04122	ko00000,ko00001,ko01000,ko03016	Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
PAMFEDIP_00904	9.64e-307	ktrB	-	-	P	ko:K03498	-	ko00000,ko02000	Potassium uptake protein
PAMFEDIP_00905	4.64e-150	ktrA	-	-	P	ko:K03499	-	ko00000,ko02000	domain protein
PAMFEDIP_00906	4.17e-153	-	-	-	N	-	-	-	WxL domain surface cell wall-binding
PAMFEDIP_00907	2.02e-247	-	-	-	S	-	-	-	Bacterial protein of unknown function (DUF916)
PAMFEDIP_00908	0.0	-	-	-	N	-	-	-	domain, Protein
PAMFEDIP_00909	2.41e-157	pgm6	-	-	G	-	-	-	phosphoglycerate mutase
PAMFEDIP_00910	1.02e-155	-	-	-	S	-	-	-	repeat protein
PAMFEDIP_00911	0.0	recD2	3.1.11.5	-	L	ko:K03581	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
PAMFEDIP_00912	5.35e-220	prs2	2.7.6.1	-	F	ko:K00948	ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PAMFEDIP_00913	2.62e-168	-	-	-	M	ko:K21471	-	ko00000,ko01000,ko01002,ko01011	NlpC P60 family protein
PAMFEDIP_00914	2.16e-39	-	-	-	-	-	-	-	-
PAMFEDIP_00915	3.45e-240	ytlR	-	-	I	-	-	-	Diacylglycerol kinase catalytic domain
PAMFEDIP_00916	0.0	rnjA	-	-	J	ko:K12574	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PAMFEDIP_00917	4.86e-45	ykzG	-	-	S	-	-	-	Belongs to the UPF0356 family
PAMFEDIP_00918	6.45e-111	-	-	-	-	-	-	-	-
PAMFEDIP_00919	3.95e-132	def	3.5.1.88	-	J	ko:K01462	-	ko00000,ko01000	Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
PAMFEDIP_00920	1.21e-268	pdhA	1.2.4.1	-	C	ko:K00161	ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04922,ko05230,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200,map04066,map04922,map05230	br01601,ko00000,ko00001,ko00002,ko01000	Dehydrogenase E1 component
PAMFEDIP_00921	8.65e-228	pdhB	1.2.4.1	-	C	ko:K00162	ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04922,ko05230,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200,map04066,map04922,map05230	br01601,ko00000,ko00001,ko00002,ko01000	Transketolase, C-terminal domain protein
PAMFEDIP_00922	2.36e-285	pdhC	2.3.1.12	-	C	ko:K00627	ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
PAMFEDIP_00923	0.0	pdhD	1.8.1.4	-	C	ko:K00382	ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000,ko04147	Dehydrogenase
PAMFEDIP_00924	2.15e-209	-	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	L-malate dehydrogenase activity
PAMFEDIP_00925	2.64e-62	yktA	-	-	S	-	-	-	Belongs to the UPF0223 family
PAMFEDIP_00926	7.1e-177	suhB	3.1.3.25	-	G	ko:K01092	ko00521,ko00562,ko01100,ko04070,map00521,map00562,map01100,map04070	ko00000,ko00001,ko00002,ko01000	Belongs to the inositol monophosphatase superfamily
PAMFEDIP_00927	0.0	typA	-	-	T	ko:K06207	-	ko00000	GTP-binding protein TypA
PAMFEDIP_00928	4.84e-227	-	-	-	-	-	-	-	-
PAMFEDIP_00929	9.51e-135	-	-	-	-	-	-	-	-
PAMFEDIP_00930	3.72e-14	icaA	-	-	M	-	-	-	Glycosyl transferase family group 2
PAMFEDIP_00931	4.54e-54	-	-	-	-	-	-	-	-
PAMFEDIP_00933	8.83e-317	-	-	-	EGP	-	-	-	Major Facilitator
PAMFEDIP_00934	5.61e-216	-	-	-	P	ko:K02077	-	ko00000,ko00002,ko02000	Belongs to the bacterial solute-binding protein 9 family
PAMFEDIP_00935	4.26e-109	cvpA	-	-	S	-	-	-	Colicin V production protein
PAMFEDIP_00936	9.61e-84	folB	1.13.11.81, 4.1.2.25, 5.1.99.8	-	H	ko:K01633	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
PAMFEDIP_00937	1.59e-121	folK	2.7.6.3	-	H	ko:K00950	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
PAMFEDIP_00938	1.8e-134	folE	2.7.6.3, 3.5.4.16	-	F	ko:K00950,ko:K01495	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	GTP cyclohydrolase 1
PAMFEDIP_00939	0.0	folC	6.3.2.12, 6.3.2.17	-	H	ko:K11754	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the folylpolyglutamate synthase family
PAMFEDIP_00940	2.01e-134	folQ	3.6.1.66	-	F	ko:K02428	ko00230,map00230	ko00000,ko00001,ko01000	Ham1 family
PAMFEDIP_00941	5.59e-271	folP	2.5.1.15	-	H	ko:K00796	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	dihydropteroate synthase
PAMFEDIP_00942	3.91e-124	tag2	3.2.2.20	-	L	ko:K01246	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	glycosylase
PAMFEDIP_00943	8.03e-28	-	-	-	-	-	-	-	-
PAMFEDIP_00944	1.3e-207	czcD	-	-	P	ko:K16264	-	ko00000,ko02000	cation diffusion facilitator family transporter
PAMFEDIP_00945	7.27e-73	-	-	-	K	ko:K21903	-	ko00000,ko03000	helix_turn_helix, Arsenical Resistance Operon Repressor
PAMFEDIP_00946	2.94e-149	hlyIII	-	-	S	ko:K11068	-	ko00000,ko02042	protein, hemolysin III
PAMFEDIP_00947	1.97e-60	qacH	-	-	U	ko:K03297	-	ko00000,ko02000	Small Multidrug Resistance protein
PAMFEDIP_00948	1.63e-77	-	-	-	P	ko:K03297	-	ko00000,ko02000	Small Multidrug Resistance protein
PAMFEDIP_00949	1.38e-275	metE	2.1.1.14	-	E	ko:K00549	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	methionine synthase, vitamin-B12 independent
PAMFEDIP_00950	3.1e-228	ydbI	-	-	K	-	-	-	AI-2E family transporter
PAMFEDIP_00951	5.87e-101	yeaB	-	-	P	-	-	-	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
PAMFEDIP_00952	0.0	kup	-	-	P	ko:K03549	-	ko00000,ko02000	Transport of potassium into the cell
PAMFEDIP_00954	0.0	yhdG	-	-	E	ko:K03294	-	ko00000	C-terminus of AA_permease
PAMFEDIP_00955	4.62e-107	-	-	-	-	-	-	-	-
PAMFEDIP_00957	0.0	cls	-	-	I	ko:K06131	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PAMFEDIP_00958	1.02e-187	ptp2	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Tyrosine phosphatase family
PAMFEDIP_00959	4.17e-235	guaC	1.7.1.7	-	F	ko:K00364	ko00230,map00230	ko00000,ko00001,ko01000	Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
PAMFEDIP_00960	0.0	purA	6.3.4.4	-	F	ko:K01939	ko00230,ko00250,ko01100,map00230,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
PAMFEDIP_00961	3.66e-315	purB	4.3.2.2	-	F	ko:K01756	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
PAMFEDIP_00962	2.05e-72	-	-	-	S	-	-	-	Enterocin A Immunity
PAMFEDIP_00963	0.0	gshR3	1.8.1.7	-	C	ko:K00383	ko00480,ko04918,map00480,map04918	ko00000,ko00001,ko01000	Glutathione reductase
PAMFEDIP_00964	1.49e-253	glxK	2.7.1.165	-	G	ko:K00865	ko00260,ko00561,ko00630,ko01100,ko01120,ko01130,map00260,map00561,map00630,map01100,map01120,map01130	ko00000,ko00001,ko01000	Belongs to the glycerate kinase type-1 family
PAMFEDIP_00965	9.07e-233	-	-	-	D	ko:K06889	-	ko00000	Alpha beta
PAMFEDIP_00966	2.85e-210	crtM	2.5.1.32, 2.5.1.99	-	I	ko:K02291	ko00906,ko01062,ko01100,ko01110,map00906,map01062,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01006	Squalene/phytoene synthase
PAMFEDIP_00967	0.0	-	1.3.99.26, 1.3.99.28, 1.3.99.29, 1.3.99.31	-	Q	ko:K10027	ko00906,ko01100,ko01110,map00906,map01100,map01110	ko00000,ko00001,ko01000	Flavin containing amine oxidoreductase
PAMFEDIP_00968	7.02e-151	yugP	-	-	S	ko:K06973	-	ko00000	Putative neutral zinc metallopeptidase
PAMFEDIP_00969	1.03e-34	-	-	-	-	-	-	-	-
PAMFEDIP_00970	1.56e-185	WQ51_01275	-	-	S	-	-	-	EDD domain protein, DegV family
PAMFEDIP_00971	2.88e-164	lrgB	-	-	M	ko:K05339	ko02020,map02020	ko00000,ko00001	LrgB-like family
PAMFEDIP_00972	4.14e-84	lrgA	-	-	S	ko:K05338	ko02020,map02020	ko00000,ko00001,ko02000	LrgA family
PAMFEDIP_00973	2.8e-135	-	-	-	J	-	-	-	Acetyltransferase (GNAT) domain
PAMFEDIP_00974	1.33e-100	-	3.1.4.17, 3.1.4.53	-	S	ko:K01120,ko:K03651	ko00230,ko02025,map00230,map02025	ko00000,ko00001,ko01000	Calcineurin-like phosphoesterase
PAMFEDIP_00975	7.47e-77	-	3.1.4.17, 3.1.4.53	-	S	ko:K01120,ko:K03651	ko00230,ko02025,map00230,map02025	ko00000,ko00001,ko01000	Calcineurin-like phosphoesterase
PAMFEDIP_00976	6.46e-49	-	-	-	S	-	-	-	Phospholipase_D-nuclease N-terminal
PAMFEDIP_00977	1.28e-77	-	-	-	S	-	-	-	Enterocin A Immunity
PAMFEDIP_00978	1.55e-114	perR	-	-	P	ko:K03711,ko:K09825	-	ko00000,ko03000	Belongs to the Fur family
PAMFEDIP_00979	1.16e-135	-	-	-	-	-	-	-	-
PAMFEDIP_00980	8.44e-304	-	-	-	S	-	-	-	module of peptide synthetase
PAMFEDIP_00981	2.95e-100	-	-	-	S	-	-	-	NADPH-dependent FMN reductase
PAMFEDIP_00983	1.25e-164	nth2	-	-	L	ko:K07457	-	ko00000	Base excision DNA repair protein, HhH-GPD family
PAMFEDIP_00984	0.0	pts28ABC	-	-	G	ko:K02755,ko:K02756,ko:K02757	ko02060,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
PAMFEDIP_00985	7.54e-200	-	-	-	GM	-	-	-	NmrA-like family
PAMFEDIP_00986	4.08e-101	-	-	-	K	-	-	-	MerR family regulatory protein
PAMFEDIP_00988	2.16e-208	-	-	-	K	-	-	-	Transcriptional regulator
PAMFEDIP_00989	2.43e-206	akr5f	1.1.1.346	-	S	ko:K06221	-	ko00000,ko01000	reductase
PAMFEDIP_00990	1.66e-211	-	1.1.1.346	-	S	ko:K06221	-	ko00000,ko01000	Oxidoreductase, aldo keto reductase family protein
PAMFEDIP_00991	5.73e-100	-	-	-	K	-	-	-	Winged helix DNA-binding domain
PAMFEDIP_00992	0.0	ycaM	-	-	E	-	-	-	amino acid
PAMFEDIP_00993	2.38e-164	aroC1	4.2.1.10	-	E	ko:K03785	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Type I 3-dehydroquinase
PAMFEDIP_00994	4.3e-44	-	-	-	-	-	-	-	-
PAMFEDIP_00995	0.0	-	-	-	M	-	-	-	Bacterial surface protein 26-residue PARCEL repeat (3 repeats)
PAMFEDIP_00996	9.78e-187	-	-	-	M	-	-	-	Bacterial surface protein 26-residue PARCEL repeat (3 repeats)
PAMFEDIP_00997	0.0	-	-	-	M	-	-	-	Domain of unknown function (DUF5011)
PAMFEDIP_00998	4.75e-101	fld	-	-	C	ko:K03839	-	ko00000	Flavodoxin
PAMFEDIP_00999	0.0	-	-	-	-	ko:K21471	-	ko00000,ko01000,ko01002,ko01011	-
PAMFEDIP_01000	1.54e-131	-	1.5.1.40	-	S	ko:K06988	-	ko00000,ko01000	NADP oxidoreductase coenzyme F420-dependent
PAMFEDIP_01001	1.96e-224	serA1	-	-	EH	-	-	-	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
PAMFEDIP_01002	3.98e-204	-	-	-	EG	-	-	-	EamA-like transporter family
PAMFEDIP_01003	6.86e-232	ykpB	1.1.1.169	-	H	ko:K00077	ko00770,ko01100,ko01110,map00770,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
PAMFEDIP_01004	5.06e-196	-	-	-	S	-	-	-	hydrolase
PAMFEDIP_01005	7.63e-107	-	-	-	-	-	-	-	-
PAMFEDIP_01006	1.75e-156	pgm7	-	-	G	-	-	-	Phosphoglycerate mutase family
PAMFEDIP_01007	1.4e-181	epsV	-	-	S	-	-	-	glycosyl transferase family 2
PAMFEDIP_01008	1.23e-166	gntR	-	-	K	ko:K03489	-	ko00000,ko03000	UTRA
PAMFEDIP_01009	1.86e-64	pts20B	2.7.1.196, 2.7.1.205	-	G	ko:K02760	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
PAMFEDIP_01010	6.7e-74	celC	2.7.1.196, 2.7.1.205	-	G	ko:K02759	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose Cellobiose specific IIA subunit
PAMFEDIP_01011	0.0	pbg5	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
PAMFEDIP_01012	0.0	pbg4	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
PAMFEDIP_01013	0.0	dsdA	4.3.1.18	-	E	ko:K01753	ko00260,map00260	ko00000,ko00001,ko01000	Belongs to the serine threonine dehydratase family. DsdA subfamily
PAMFEDIP_01014	4.29e-173	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	AAA domain, putative AbiEii toxin, Type IV TA system
PAMFEDIP_01015	9.24e-231	-	-	-	V	ko:K01992	-	ko00000,ko00002,ko02000	ABC transporter
PAMFEDIP_01016	6.09e-152	-	-	-	K	-	-	-	Transcriptional regulator
PAMFEDIP_01017	0.0	nadC2	6.3.4.21	-	F	ko:K00763	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
PAMFEDIP_01018	7.54e-115	yrxA	-	-	S	ko:K07105	-	ko00000	3H domain
PAMFEDIP_01019	4.43e-294	-	-	-	S	-	-	-	Sterol carrier protein domain
PAMFEDIP_01020	2.45e-269	ybhE	-	-	S	ko:K09963	-	ko00000	Bacterial protein of unknown function (DUF871)
PAMFEDIP_01021	3.25e-48	XK27_01315	-	-	S	-	-	-	Protein of unknown function (DUF2829)
PAMFEDIP_01022	5.41e-172	fabG	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Enoyl-(Acyl carrier protein) reductase
PAMFEDIP_01023	2.26e-91	-	-	-	FG	-	-	-	Scavenger mRNA decapping enzyme C-term binding
PAMFEDIP_01024	1.13e-132	-	3.6.1.13	-	L	ko:K01515	ko00230,map00230	ko00000,ko00001,ko01000	Belongs to the Nudix hydrolase family
PAMFEDIP_01025	5.88e-142	-	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	Maltose acetyltransferase
PAMFEDIP_01026	2.99e-38	-	-	-	S	-	-	-	Pentapeptide repeats (8 copies)
PAMFEDIP_01027	4.65e-186	-	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
PAMFEDIP_01028	0.0	thrC	4.2.3.1	-	E	ko:K01733	ko00260,ko00750,ko01100,ko01110,ko01120,ko01230,map00260,map00750,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Threonine synthase
PAMFEDIP_01029	0.0	nplT	3.2.1.133, 3.2.1.135, 3.2.1.54	GH13	G	ko:K01208	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 13 family
PAMFEDIP_01031	1.21e-69	-	-	-	-	-	-	-	-
PAMFEDIP_01032	1.52e-151	-	-	-	-	-	-	-	-
PAMFEDIP_01033	1.16e-110	-	-	-	F	-	-	-	belongs to the nudix hydrolase family
PAMFEDIP_01034	3.03e-299	patB	4.4.1.8	-	E	ko:K14155	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko01000,ko01007	Aminotransferase, class I
PAMFEDIP_01035	4.79e-13	-	-	-	-	-	-	-	-
PAMFEDIP_01036	5.92e-67	-	-	-	-	-	-	-	-
PAMFEDIP_01037	1.76e-114	-	-	-	-	-	-	-	-
PAMFEDIP_01038	5.7e-95	gtcA	-	-	S	-	-	-	Teichoic acid glycosylation protein
PAMFEDIP_01039	3.64e-46	-	-	-	-	-	-	-	-
PAMFEDIP_01040	1.1e-103	usp5	-	-	T	-	-	-	universal stress protein
PAMFEDIP_01041	4.21e-175	-	-	-	-	-	-	-	-
PAMFEDIP_01042	7.89e-212	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PAMFEDIP_01043	8.2e-81	-	-	-	K	-	-	-	Transcriptional regulator, GntR family
PAMFEDIP_01044	1.87e-53	-	-	-	-	-	-	-	-
PAMFEDIP_01045	0.0	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	FtsX-like permease family
PAMFEDIP_01046	2.05e-178	cysA	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PAMFEDIP_01047	3.7e-233	ansB	3.5.1.1	-	EJ	ko:K01424	ko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110	ko00000,ko00001,ko01000	Asparaginase
PAMFEDIP_01048	6.89e-190	-	-	-	S	-	-	-	Alpha/beta hydrolase of unknown function (DUF915)
PAMFEDIP_01049	5.95e-153	cah	4.2.1.1	-	P	ko:K01674	ko00910,map00910	ko00000,ko00001,ko01000	Eukaryotic-type carbonic anhydrase
PAMFEDIP_01050	4.81e-188	ptp3	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Tyrosine phosphatase family
PAMFEDIP_01051	5.76e-243	lplL	6.3.1.20	-	H	ko:K03800	ko00785,ko01100,map00785,map01100	ko00000,ko00001,ko01000	Bacterial lipoate protein ligase C-terminus
PAMFEDIP_01052	9.92e-143	-	-	-	S	-	-	-	NADPH-dependent FMN reductase
PAMFEDIP_01053	4.57e-304	XK27_09615	1.5.1.36	-	S	ko:K19784,ko:K22393	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	reductase
PAMFEDIP_01054	3.77e-104	purE	5.4.99.18	-	F	ko:K01588	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
PAMFEDIP_01055	2.87e-270	purK	6.3.4.18	-	F	ko:K01589	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
PAMFEDIP_01056	3.39e-168	purC	6.3.2.6	-	F	ko:K01923	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the SAICAR synthetase family
PAMFEDIP_01057	1.17e-55	purS	6.3.5.3	-	F	ko:K01952	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PAMFEDIP_01058	6.91e-164	purQ	6.3.5.3	-	F	ko:K01952	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PAMFEDIP_01059	0.0	purL	6.3.5.3	-	F	ko:K01952	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PAMFEDIP_01060	0.0	purF	2.4.2.14	-	F	ko:K00764	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko01002	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
PAMFEDIP_01061	4.22e-243	purM	6.3.3.1	-	F	ko:K01933	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Phosphoribosylformylglycinamidine cyclo-ligase
PAMFEDIP_01062	5.35e-133	purN	2.1.2.2	-	F	ko:K11175	ko00230,ko00670,ko01100,ko01110,ko01130,map00230,map00670,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
PAMFEDIP_01063	0.0	purH	2.1.2.3, 3.5.4.10	-	F	ko:K00602	ko00230,ko00670,ko01100,ko01110,ko01130,ko01523,map00230,map00670,map01100,map01110,map01130,map01523	ko00000,ko00001,ko00002,ko01000,ko04147	Bifunctional purine biosynthesis protein PurH
PAMFEDIP_01064	9.06e-279	purD	6.3.4.13	-	F	ko:K01945	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the GARS family
PAMFEDIP_01065	1.83e-157	-	-	-	E	-	-	-	Methionine synthase
PAMFEDIP_01066	0.0	yijG	-	GT2	M	ko:K11936	ko02026,map02026	ko00000,ko00001,ko01000,ko01003,ko02000	Glycosyl transferase
PAMFEDIP_01067	1.85e-121	-	-	-	-	-	-	-	-
PAMFEDIP_01068	1.25e-199	-	-	-	T	-	-	-	EAL domain
PAMFEDIP_01069	2.24e-206	-	-	-	GM	-	-	-	NmrA-like family
PAMFEDIP_01070	5.67e-280	pbuG	-	-	S	ko:K06901	-	ko00000,ko02000	Permease family
PAMFEDIP_01071	3.1e-305	pbuX	-	-	F	ko:K03458,ko:K16169	-	ko00000,ko02000	xanthine permease
PAMFEDIP_01072	0.0	pucR_2	-	-	QT	ko:K09684	-	ko00000,ko03000	Purine catabolism regulatory protein-like family
PAMFEDIP_01073	7.13e-123	pyrR	2.4.2.9	-	F	ko:K02825	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000,ko03000	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
PAMFEDIP_01074	2.02e-219	pyrB	2.1.3.2	-	F	ko:K00609	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the ATCase OTCase family
PAMFEDIP_01075	1.61e-308	pyrC	3.5.2.3	-	F	ko:K01465	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
PAMFEDIP_01076	2.76e-271	carA	6.3.5.5	-	F	ko:K01956	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthetase glutamine chain
PAMFEDIP_01077	0.0	carB	6.3.5.5	-	F	ko:K01955	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthase
PAMFEDIP_01078	1.04e-218	pyrD	1.3.1.14, 1.3.98.1	-	F	ko:K00226,ko:K17828	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
PAMFEDIP_01079	1.55e-161	pyrF	4.1.1.23	-	F	ko:K01591	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
PAMFEDIP_01080	5.46e-145	pyrE	2.4.2.10	-	F	ko:K00762	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
PAMFEDIP_01081	1.12e-216	oroP	-	-	S	ko:K09936	ko02024,map02024	ko00000,ko00001,ko02000	Putative inner membrane exporter, YdcZ
PAMFEDIP_01082	0.0	rexB	3.6.4.12	-	L	ko:K16899	-	ko00000,ko01000,ko03400	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
PAMFEDIP_01083	0.0	addA	3.6.4.12	-	L	ko:K16898	-	ko00000,ko01000,ko03400	ATP-dependent helicase nuclease subunit A
PAMFEDIP_01084	3.86e-124	-	-	-	K	-	-	-	Acetyltransferase (GNAT) family
PAMFEDIP_01085	1.29e-148	-	-	-	GM	-	-	-	NAD(P)H-binding
PAMFEDIP_01086	6.68e-207	mleR	-	-	K	-	-	-	LysR family
PAMFEDIP_01087	2.09e-169	-	-	-	S	ko:K07090	-	ko00000	membrane transporter protein
PAMFEDIP_01088	3.59e-26	-	-	-	-	-	-	-	-
PAMFEDIP_01089	1.84e-204	dapA	4.3.3.7	-	E	ko:K01714	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
PAMFEDIP_01090	1.02e-277	araT2	-	-	E	ko:K00841	ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase
PAMFEDIP_01091	0.0	gabR	-	-	K	ko:K00375	-	ko00000,ko03000	Bacterial regulatory proteins, gntR family
PAMFEDIP_01092	0.0	zwf	1.1.1.363, 1.1.1.49	-	G	ko:K00036	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,ko05230,map00030,map00480,map01100,map01110,map01120,map01130,map01200,map05230	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
PAMFEDIP_01093	4.71e-74	-	-	-	S	-	-	-	SdpI/YhfL protein family
PAMFEDIP_01094	4.68e-161	-	-	-	C	-	-	-	Zinc-binding dehydrogenase
PAMFEDIP_01095	9.75e-39	-	-	-	C	-	-	-	Zinc-binding dehydrogenase
PAMFEDIP_01096	3.45e-83	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
PAMFEDIP_01097	2.03e-271	yttB	-	-	EGP	-	-	-	Major Facilitator
PAMFEDIP_01098	0.0	nhaP3	-	-	P	ko:K03316	-	ko00000	Sodium proton antiporter
PAMFEDIP_01099	1.18e-114	nrdI	-	-	F	ko:K03647	-	ko00000	Belongs to the NrdI family
PAMFEDIP_01100	0.0	yhdP	-	-	S	-	-	-	Transporter associated domain
PAMFEDIP_01101	2.97e-76	-	-	-	-	-	-	-	-
PAMFEDIP_01102	2.61e-96	hsp2	-	-	O	ko:K13993	ko04141,map04141	ko00000,ko00001,ko03110	Belongs to the small heat shock protein (HSP20) family
PAMFEDIP_01103	1.55e-79	-	-	-	-	-	-	-	-
PAMFEDIP_01104	1.7e-118	-	-	-	K	-	-	-	Domain of unknown function (DUF1836)
PAMFEDIP_01105	8.05e-179	rrp8	-	-	K	-	-	-	LytTr DNA-binding domain
PAMFEDIP_01106	1.97e-150	yagB	-	-	S	ko:K06950	-	ko00000	Metal dependent phosphohydrolases with conserved 'HD' motif.
PAMFEDIP_01107	2.48e-178	-	-	-	-	-	-	-	-
PAMFEDIP_01108	4.75e-117	ybaK	-	-	S	ko:K03976	-	ko00000,ko01000,ko03016	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
PAMFEDIP_01109	3.53e-169	-	-	-	K	-	-	-	Transcriptional regulator
PAMFEDIP_01110	2.01e-209	-	-	-	S	-	-	-	Putative esterase
PAMFEDIP_01111	0.0	xfp	4.1.2.22, 4.1.2.9	-	G	ko:K01621	ko00030,ko00710,ko01100,ko01120,map00030,map00710,map01100,map01120	ko00000,ko00001,ko01000	Phosphoketolase
PAMFEDIP_01112	1.25e-283	-	-	-	M	-	-	-	Glycosyl transferases group 1
PAMFEDIP_01113	1.38e-30	-	-	-	S	-	-	-	Protein of unknown function (DUF2929)
PAMFEDIP_01114	4.05e-64	-	-	-	K	-	-	-	Cro/C1-type HTH DNA-binding domain
PAMFEDIP_01115	2.5e-203	rluA	5.4.99.23, 5.4.99.28, 5.4.99.29	-	J	ko:K06177,ko:K06180	-	ko00000,ko01000,ko03009,ko03016	Responsible for synthesis of pseudouridine from uracil
PAMFEDIP_01116	2.51e-103	uspA3	-	-	T	-	-	-	universal stress protein
PAMFEDIP_01117	0.0	acm2	3.2.1.17	-	NU	ko:K01185	-	ko00000,ko01000	Bacterial SH3 domain
PAMFEDIP_01118	4.26e-250	lplA	6.3.1.20	-	H	ko:K03800	ko00785,ko01100,map00785,map01100	ko00000,ko00001,ko01000	Lipoate-protein ligase
PAMFEDIP_01119	4.15e-78	-	-	-	-	-	-	-	-
PAMFEDIP_01120	1.65e-97	-	-	-	-	-	-	-	-
PAMFEDIP_01121	6.94e-106	-	-	-	S	-	-	-	Protein of unknown function (DUF2798)
PAMFEDIP_01122	2.57e-70	-	-	-	-	-	-	-	-
PAMFEDIP_01123	3.89e-62	-	-	-	-	-	-	-	-
PAMFEDIP_01124	3.87e-262	metB	2.5.1.48	-	E	ko:K01739	ko00270,ko00450,ko00920,ko01100,ko01110,ko01130,ko01230,map00270,map00450,map00920,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Cys/Met metabolism PLP-dependent enzyme
PAMFEDIP_01125	9.89e-74	ytpP	-	-	CO	-	-	-	Thioredoxin
PAMFEDIP_01126	1.19e-186	-	-	-	S	ko:K06889	-	ko00000	Dienelactone hydrolase family
PAMFEDIP_01127	1.83e-37	-	-	-	-	-	-	-	-
PAMFEDIP_01128	0.0	spxB	1.2.3.3	-	EH	ko:K00158	ko00620,ko01100,map00620,map01100	ko00000,ko00001,ko01000	Belongs to the TPP enzyme family
PAMFEDIP_01129	2.8e-63	-	-	-	-	-	-	-	-
PAMFEDIP_01130	1.23e-75	-	-	-	-	-	-	-	-
PAMFEDIP_01131	1.86e-210	-	-	-	-	-	-	-	-
PAMFEDIP_01132	1.4e-95	-	-	-	K	-	-	-	Transcriptional regulator
PAMFEDIP_01133	0.0	pepF2	-	-	E	-	-	-	Oligopeptidase F
PAMFEDIP_01134	8.94e-221	ybcH	-	-	D	ko:K06889	-	ko00000	Alpha beta
PAMFEDIP_01135	7.2e-61	-	-	-	S	-	-	-	Enterocin A Immunity
PAMFEDIP_01136	8.34e-86	lexA	-	-	K	ko:K07979	-	ko00000,ko03000	Transcriptional regulator, GntR family
PAMFEDIP_01137	1.01e-161	skfE	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter
PAMFEDIP_01138	2.66e-172	-	-	-	-	-	-	-	-
PAMFEDIP_01139	9.38e-139	pncA	-	-	Q	-	-	-	Isochorismatase family
PAMFEDIP_01140	0.0	dxs	2.2.1.7	-	H	ko:K01662	ko00730,ko00900,ko01100,ko01110,ko01130,map00730,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
PAMFEDIP_01141	0.0	nhaP2	-	-	P	ko:K03316	-	ko00000	Sodium proton antiporter
PAMFEDIP_01142	8.97e-253	yhhX	-	-	S	-	-	-	Oxidoreductase family, C-terminal alpha/beta domain
PAMFEDIP_01143	2.48e-227	-	-	-	S	-	-	-	Oxidoreductase family, NAD-binding Rossmann fold
PAMFEDIP_01144	5.91e-150	-	-	-	K	-	-	-	Helix-turn-helix domain, rpiR family
PAMFEDIP_01145	1.48e-201	ccpB	-	-	K	-	-	-	lacI family
PAMFEDIP_01146	2.2e-157	-	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
PAMFEDIP_01147	3.68e-203	rnhA	3.1.26.4	-	L	ko:K03469	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PAMFEDIP_01148	5.02e-228	iunH1	3.2.2.1	-	F	ko:K01239	ko00230,ko00760,ko01100,map00230,map00760,map01100	ko00000,ko00001,ko01000	nucleoside hydrolase
PAMFEDIP_01149	3e-127	-	-	-	C	-	-	-	Nitroreductase family
PAMFEDIP_01150	6.04e-217	-	-	-	S	-	-	-	Polyphosphate kinase 2 (PPK2)
PAMFEDIP_01151	2.69e-316	dinF	-	-	V	-	-	-	MatE
PAMFEDIP_01152	1.79e-42	-	-	-	-	-	-	-	-
PAMFEDIP_01155	8.2e-102	yybD	-	-	S	ko:K02348	-	ko00000	Acetyltransferase (GNAT) domain
PAMFEDIP_01156	0.0	argS	6.1.1.19	-	J	ko:K01887	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Arginyl-tRNA synthetase
PAMFEDIP_01157	4.64e-106	-	-	-	-	-	-	-	-
PAMFEDIP_01158	0.0	yhcA	-	-	V	ko:K02003,ko:K02004	-	ko00000,ko00002,ko02000	MacB-like periplasmic core domain
PAMFEDIP_01159	1.04e-136	-	-	-	-	-	-	-	-
PAMFEDIP_01160	0.0	celR	-	-	K	-	-	-	PRD domain
PAMFEDIP_01161	1.34e-104	-	-	-	S	-	-	-	Domain of unknown function (DUF3284)
PAMFEDIP_01162	2.37e-68	lacF	2.7.1.196, 2.7.1.205, 2.7.1.207	-	G	ko:K02759,ko:K02786	ko00052,ko00500,ko01100,ko02060,map00052,map00500,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIA subunit
PAMFEDIP_01163	4.9e-64	-	2.7.1.196, 2.7.1.205	-	G	ko:K02760	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
PAMFEDIP_01164	1.71e-277	-	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PAMFEDIP_01165	0.0	-	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
PAMFEDIP_01166	3.5e-271	-	-	-	EGP	ko:K08218	ko01501,map01501	ko00000,ko00001,ko00002,ko02000	Major facilitator Superfamily
PAMFEDIP_01167	2.34e-146	yciB	-	-	M	-	-	-	ErfK YbiS YcfS YnhG
PAMFEDIP_01168	1.65e-46	dltC2	6.1.1.13	-	J	ko:K14188	ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01000,ko01504	Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PAMFEDIP_01169	0.0	ydfD	-	-	K	ko:K18907	-	ko00000,ko00002,ko01504,ko03000	Alanine-glyoxylate amino-transferase
PAMFEDIP_01170	8.08e-133	argO	-	-	S	ko:K06895	-	ko00000,ko02000	LysE type translocator
PAMFEDIP_01171	5.58e-271	arcT	-	-	E	-	-	-	Aminotransferase
PAMFEDIP_01172	2.07e-102	argR	-	-	K	ko:K03402	-	ko00000,ko03000	Regulates arginine biosynthesis genes
PAMFEDIP_01173	2.43e-18	-	-	-	-	-	-	-	-
PAMFEDIP_01174	0.0	pbp2A	2.4.1.129, 3.4.16.4	GT51	M	ko:K12555	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01003,ko01011	penicillin-binding protein
PAMFEDIP_01175	9.94e-71	yheA	-	-	S	-	-	-	Belongs to the UPF0342 family
PAMFEDIP_01176	4.47e-296	yhaO	-	-	L	ko:K03547	-	ko00000,ko03400	Ser Thr phosphatase family protein
PAMFEDIP_01177	0.0	yhaN	-	-	L	-	-	-	AAA domain
PAMFEDIP_01178	1.03e-240	yhaM	-	-	S	ko:K03698	-	ko00000,ko01000,ko03019	Metal dependent phosphohydrolases with conserved 'HD' motif.
PAMFEDIP_01179	1.05e-272	-	-	-	-	-	-	-	-
PAMFEDIP_01180	2.41e-233	-	-	-	M	-	-	-	Peptidase family S41
PAMFEDIP_01181	1.09e-225	-	-	-	K	-	-	-	LysR substrate binding domain
PAMFEDIP_01182	9.9e-144	-	-	-	S	-	-	-	NADPH-dependent FMN reductase
PAMFEDIP_01183	0.0	-	1.3.5.4	-	C	ko:K00244	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	ko00000,ko00001,ko00002,ko01000	FAD binding domain
PAMFEDIP_01184	4.43e-129	-	-	-	-	-	-	-	-
PAMFEDIP_01185	1.17e-100	-	2.4.2.6	-	F	ko:K08728	ko00240,map00240	ko00000,ko00001,ko01000	Nucleoside 2-deoxyribosyltransferase
PAMFEDIP_01186	1.15e-235	ykoT	-	-	M	-	-	-	Glycosyl transferase family 2
PAMFEDIP_01187	7.78e-20	-	-	-	M	-	-	-	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
PAMFEDIP_01188	0.0	-	-	-	M	-	-	-	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
PAMFEDIP_01189	4.29e-26	-	-	-	S	-	-	-	NUDIX domain
PAMFEDIP_01190	0.0	-	-	-	S	-	-	-	membrane
PAMFEDIP_01191	4.26e-218	ribD	1.1.1.193, 3.5.4.26	-	H	ko:K11752	ko00740,ko01100,ko01110,ko02024,map00740,map01100,map01110,map02024	ko00000,ko00001,ko00002,ko01000	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
PAMFEDIP_01192	2.61e-95	ribE	2.5.1.9	-	H	ko:K00793	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Riboflavin synthase
PAMFEDIP_01193	2.08e-284	ribA	3.5.4.25, 4.1.99.12	-	H	ko:K02858,ko:K14652	ko00740,ko00790,ko01100,ko01110,map00740,map00790,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate
PAMFEDIP_01194	1.23e-106	ribH	2.5.1.78	-	H	ko:K00794	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin
PAMFEDIP_01195	5.21e-137	-	-	-	S	ko:K09962	-	ko00000	Nucleotidyltransferase
PAMFEDIP_01196	1.96e-137	-	-	-	-	-	-	-	-
PAMFEDIP_01197	3.3e-151	crp2	-	-	K	ko:K10914,ko:K21562	ko02020,ko02024,ko02025,ko02026,ko05111,map02020,map02024,map02025,map02026,map05111	ko00000,ko00001,ko03000	helix_turn_helix, cAMP Regulatory protein
PAMFEDIP_01198	1.08e-95	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PAMFEDIP_01199	0.0	-	-	-	S	-	-	-	ABC transporter, ATP-binding protein
PAMFEDIP_01200	9.24e-140	-	-	-	K	ko:K06977	-	ko00000	acetyltransferase
PAMFEDIP_01201	2.35e-106	-	-	-	E	-	-	-	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PAMFEDIP_01202	2.64e-61	-	-	-	-	-	-	-	-
PAMFEDIP_01203	0.0	nagE	2.7.1.193, 2.7.1.199, 2.7.1.208	-	G	ko:K02777,ko:K02802,ko:K02803,ko:K02804,ko:K20107,ko:K20108,ko:K20116,ko:K20117,ko:K20118	ko00010,ko00500,ko00520,ko02026,ko02060,ko05111,map00010,map00500,map00520,map02026,map02060,map05111	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system, EIIB
PAMFEDIP_01204	1.31e-242	panE1	1.1.1.169	-	H	ko:K00077	ko00770,ko01100,ko01110,map00770,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
PAMFEDIP_01205	3.45e-209	-	-	-	S	-	-	-	Uncharacterised protein, DegV family COG1307
PAMFEDIP_01206	6.83e-292	hom	1.1.1.3	-	E	ko:K00003	ko00260,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00270,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Homoserine dehydrogenase
PAMFEDIP_01207	6.08e-312	metY	2.5.1.49	-	E	ko:K01740	ko00270,ko01100,map00270,map01100	ko00000,ko00001,ko01000	Catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol
PAMFEDIP_01208	1.53e-213	metAA	2.3.1.46	-	E	ko:K00651	ko00270,ko00920,ko01100,ko01110,ko01230,map00270,map00920,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Transfers an acetyl group from acetyl-CoA to
PAMFEDIP_01209	9.31e-225	ABC-SBP	-	-	S	ko:K01989	-	ko00000,ko00002,ko02000	ABC transporter
PAMFEDIP_01210	6.03e-196	XK27_08840	-	-	U	ko:K05832	-	ko00000,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
PAMFEDIP_01211	1.32e-178	XK27_08845	-	-	S	ko:K05833	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PAMFEDIP_01212	0.0	npr	1.11.1.1	-	C	ko:K05910	-	ko00000,ko01000	NADH oxidase
PAMFEDIP_01213	9.51e-203	glxR	1.1.1.31	-	I	ko:K00020	ko00280,ko01100,map00280,map01100	ko00000,ko00001,ko01000	Dehydrogenase
PAMFEDIP_01214	1.18e-175	yceF	-	-	P	ko:K05794	-	ko00000	membrane
PAMFEDIP_01215	2.47e-125	-	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	Maltose acetyltransferase
PAMFEDIP_01216	1.9e-258	hisC	2.6.1.9	-	E	ko:K00817	ko00340,ko00350,ko00360,ko00400,ko00401,ko00960,ko01100,ko01110,ko01130,ko01230,map00340,map00350,map00360,map00400,map00401,map00960,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
PAMFEDIP_01217	1.07e-68	hisE	3.6.1.31	-	E	ko:K01523	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	phosphoribosyl-ATP diphosphatase activity
PAMFEDIP_01218	6.12e-78	hisI	3.5.4.19, 3.6.1.31	-	E	ko:K01496,ko:K11755	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
PAMFEDIP_01219	1.27e-172	hisF	-	-	E	ko:K02500	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
PAMFEDIP_01220	5.62e-165	hisA	5.3.1.16	-	E	ko:K01814	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
PAMFEDIP_01221	2.23e-142	hisH	-	-	E	ko:K02501	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
PAMFEDIP_01222	2.46e-139	hisB	4.2.1.19	-	E	ko:K01693	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	imidazoleglycerol-phosphate dehydratase
PAMFEDIP_01223	7.8e-299	hisD	1.1.1.23	-	E	ko:K00013	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
PAMFEDIP_01224	1.69e-151	hisG	2.4.2.17	-	F	ko:K00765,ko:K02502	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity
PAMFEDIP_01225	2.3e-275	hisZ	-	-	E	ko:K02502	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
PAMFEDIP_01226	4.54e-208	hisK	3.1.3.15	-	E	ko:K04486	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Histidinol phosphate phosphatase, HisJ
PAMFEDIP_01227	3.72e-283	ysaA	-	-	V	-	-	-	RDD family
PAMFEDIP_01228	7.28e-213	corA	-	-	P	ko:K03284	-	ko00000,ko02000	CorA-like Mg2+ transporter protein
PAMFEDIP_01229	6.7e-74	-	-	-	S	-	-	-	Domain of unknown function (DU1801)
PAMFEDIP_01230	4.73e-118	rmeB	-	-	K	-	-	-	transcriptional regulator, MerR family
PAMFEDIP_01231	1.01e-189	-	-	-	GM	-	-	-	Belongs to the short-chain dehydrogenases reductases (SDR) family
PAMFEDIP_01232	4.54e-126	-	-	-	J	-	-	-	glyoxalase III activity
PAMFEDIP_01233	1.97e-254	asd	1.2.1.11	-	E	ko:K00133	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
PAMFEDIP_01234	5.48e-236	yxeI	3.5.1.24	-	M	ko:K01442	ko00120,ko00121,ko01100,map00120,map00121,map01100	ko00000,ko00001,ko01000	Linear amide C-N hydrolase, choloylglycine hydrolase family protein
PAMFEDIP_01235	1.45e-46	-	-	-	-	-	-	-	-
PAMFEDIP_01236	1.06e-145	-	-	-	S	-	-	-	Protein of unknown function (DUF1211)
PAMFEDIP_01237	0.0	ydgH	-	-	S	ko:K06994	-	ko00000	MMPL family
PAMFEDIP_01238	6.32e-67	-	-	-	M	-	-	-	domain protein
PAMFEDIP_01239	1.78e-279	-	-	-	M	-	-	-	domain protein
PAMFEDIP_01240	6.05e-98	yjcF	-	-	S	-	-	-	Acetyltransferase (GNAT) domain
PAMFEDIP_01241	0.0	ltaS	2.7.8.20	-	M	ko:K19005	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
PAMFEDIP_01242	0.0	glpQ4	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	phosphodiesterase
PAMFEDIP_01243	0.0	-	-	-	U	ko:K03451	-	ko00000	Belongs to the BCCT transporter (TC 2.A.15) family
PAMFEDIP_01244	0.0	cadA	-	-	P	-	-	-	P-type ATPase
PAMFEDIP_01246	1.78e-159	-	-	-	S	-	-	-	YjbR
PAMFEDIP_01247	4.04e-37	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2325)
PAMFEDIP_01248	3.23e-215	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2325)
PAMFEDIP_01249	0.0	ade	3.5.4.2	-	F	ko:K01486	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
PAMFEDIP_01250	1.44e-255	glmS2	-	-	M	-	-	-	SIS domain
PAMFEDIP_01251	2.07e-35	-	-	-	S	-	-	-	Belongs to the LOG family
PAMFEDIP_01252	0.0	nhaC	-	-	C	ko:K03315	-	ko00000,ko02000	Na H antiporter NhaC
PAMFEDIP_01253	3.98e-315	cycA	-	-	E	ko:K03293,ko:K11737	-	ko00000,ko02000	Amino acid permease
PAMFEDIP_01254	5.85e-92	-	-	-	S	-	-	-	Alpha/beta hydrolase of unknown function (DUF915)
PAMFEDIP_01255	5.38e-92	-	-	-	S	-	-	-	Alpha/beta hydrolase of unknown function (DUF915)
PAMFEDIP_01256	4.75e-112	pgpA	-	-	I	-	-	-	Phosphatidylglycerophosphatase A
PAMFEDIP_01257	1.07e-206	-	-	-	GM	-	-	-	NmrA-like family
PAMFEDIP_01258	2.14e-86	-	-	-	K	ko:K22296	-	ko00000,ko03000	Winged helix DNA-binding domain
PAMFEDIP_01259	9.97e-94	spxA	-	-	P	ko:K16509	-	ko00000	ArsC family
PAMFEDIP_01260	3.46e-87	yeaO	-	-	S	-	-	-	Protein of unknown function, DUF488
PAMFEDIP_01261	1.7e-70	-	-	-	-	-	-	-	-
PAMFEDIP_01262	4.98e-275	mutY	-	-	L	ko:K03575	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	A G-specific adenine glycosylase
PAMFEDIP_01263	2.11e-82	-	-	-	-	-	-	-	-
PAMFEDIP_01264	1.36e-112	-	-	-	-	-	-	-	-
PAMFEDIP_01265	4.58e-103	hsp3	-	-	O	ko:K13993	ko04141,map04141	ko00000,ko00001,ko03110	Belongs to the small heat shock protein (HSP20) family
PAMFEDIP_01266	3.78e-73	-	-	-	-	-	-	-	-
PAMFEDIP_01267	4.79e-21	-	-	-	-	-	-	-	-
PAMFEDIP_01268	3.57e-150	-	-	-	GM	-	-	-	NmrA-like family
PAMFEDIP_01269	2.52e-107	-	-	-	S	ko:K02348	-	ko00000	GNAT family
PAMFEDIP_01270	9.43e-203	-	-	-	EG	-	-	-	EamA-like transporter family
PAMFEDIP_01271	2.66e-155	-	-	-	S	-	-	-	membrane
PAMFEDIP_01272	1.47e-144	-	-	-	S	-	-	-	VIT family
PAMFEDIP_01273	4.38e-243	pva2	3.5.1.24	-	M	ko:K01442	ko00120,ko00121,ko01100,map00120,map00121,map01100	ko00000,ko00001,ko01000	Linear amide C-N hydrolases, choloylglycine hydrolase family
PAMFEDIP_01274	0.0	copB	3.6.3.3, 3.6.3.4, 3.6.3.5, 3.6.3.54	-	P	ko:K01533,ko:K01534,ko:K17686	ko01524,ko04016,map01524,map04016	ko00000,ko00001,ko01000	P-type ATPase
PAMFEDIP_01275	8.01e-97	copR	-	-	K	ko:K02171	ko01501,map01501	ko00000,ko00001,ko00002,ko01504,ko03000	Copper transport repressor CopY TcrY
PAMFEDIP_01276	4.26e-54	-	-	-	-	-	-	-	-
PAMFEDIP_01277	3.43e-96	-	-	-	S	-	-	-	COG NOG18757 non supervised orthologous group
PAMFEDIP_01278	8.8e-315	lmrB	-	-	U	ko:K18926	-	ko00000,ko00002,ko02000	Belongs to the major facilitator superfamily
PAMFEDIP_01279	7.21e-35	-	-	-	-	-	-	-	-
PAMFEDIP_01280	2.55e-65	-	-	-	-	-	-	-	-
PAMFEDIP_01281	2.51e-84	-	-	-	S	-	-	-	Protein of unknown function (DUF1398)
PAMFEDIP_01282	0.0	-	-	-	U	-	-	-	Belongs to the purine-cytosine permease (2.A.39) family
PAMFEDIP_01283	1.77e-282	mdtG	-	-	EGP	ko:K08161	-	ko00000,ko02000	Transporter, major facilitator family protein
PAMFEDIP_01284	9.92e-230	ybcH	-	-	D	ko:K06889	-	ko00000	Alpha beta
PAMFEDIP_01285	6.1e-101	-	-	-	K	-	-	-	Domain of unknown function (DUF1836)
PAMFEDIP_01286	1.14e-110	-	-	-	F	-	-	-	Nucleoside 2-deoxyribosyltransferase
PAMFEDIP_01287	0.0	pacL3	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	Cation transporter/ATPase, N-terminus
PAMFEDIP_01288	0.0	yfkN	3.1.3.6, 3.1.4.16	-	F	ko:K01119	ko00230,ko00240,map00230,map00240	ko00000,ko00001,ko01000	Belongs to the 5'-nucleotidase family
PAMFEDIP_01289	2.3e-204	ywkB	-	-	S	ko:K07088	-	ko00000	Membrane transport protein
PAMFEDIP_01290	1.36e-209	yvgN	-	-	C	-	-	-	Aldo keto reductase
PAMFEDIP_01291	2.57e-171	-	-	-	S	-	-	-	Putative threonine/serine exporter
PAMFEDIP_01292	1.7e-101	-	-	-	S	-	-	-	Threonine/Serine exporter, ThrE
PAMFEDIP_01293	7.19e-89	-	-	-	NU	-	-	-	Mycoplasma protein of unknown function, DUF285
PAMFEDIP_01294	6.88e-152	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PAMFEDIP_01295	0.0	lepA2	-	-	M	ko:K03596	ko05134,map05134	ko00000,ko00001	Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
PAMFEDIP_01296	0.0	nhaP4	-	-	P	ko:K03316	-	ko00000	Sodium proton antiporter
PAMFEDIP_01297	1.85e-201	-	3.6.1.22	-	L	ko:K03426	ko00760,ko01100,ko04146,map00760,map01100,map04146	ko00000,ko00001,ko01000	NADH pyrophosphatase zinc ribbon domain
PAMFEDIP_01298	4.33e-205	-	-	-	K	-	-	-	LysR substrate binding domain
PAMFEDIP_01299	0.0	-	1.3.5.4	-	C	ko:K00244	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	ko00000,ko00001,ko00002,ko01000	FAD binding domain
PAMFEDIP_01300	9.48e-56	-	-	-	S	-	-	-	MucBP domain
PAMFEDIP_01301	1.1e-147	-	-	-	K	ko:K03489	-	ko00000,ko03000	UTRA
PAMFEDIP_01302	0.0	bglA	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
PAMFEDIP_01303	9.2e-317	celD	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PAMFEDIP_01304	2.09e-85	-	-	-	-	-	-	-	-
PAMFEDIP_01305	2.85e-83	-	-	-	S	-	-	-	Protein of unknown function (DUF1093)
PAMFEDIP_01306	2.15e-281	-	-	-	S	-	-	-	Membrane
PAMFEDIP_01307	1.04e-59	-	-	-	S	-	-	-	Protein of unknown function (DUF3781)
PAMFEDIP_01308	1.31e-139	yoaZ	-	-	S	-	-	-	intracellular protease amidase
PAMFEDIP_01309	2.33e-56	-	-	-	K	-	-	-	HxlR-like helix-turn-helix
PAMFEDIP_01310	5.36e-76	-	-	-	-	-	-	-	-
PAMFEDIP_01311	1.46e-81	-	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter
PAMFEDIP_01312	5.31e-66	-	-	-	K	-	-	-	Helix-turn-helix domain
PAMFEDIP_01313	3.17e-258	-	-	-	C	-	-	-	Belongs to the LDH2 MDH2 oxidoreductase family
PAMFEDIP_01314	2e-62	-	-	-	K	-	-	-	Helix-turn-helix domain
PAMFEDIP_01315	3.87e-115	-	-	-	S	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 family transporter protein
PAMFEDIP_01316	1.06e-72	-	-	-	S	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 family transporter protein
PAMFEDIP_01317	5.53e-114	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PAMFEDIP_01318	6.79e-53	-	-	-	-	-	-	-	-
PAMFEDIP_01319	5.06e-168	gpmA	5.4.2.11	-	G	ko:K01834	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PAMFEDIP_01320	1.6e-233	ydbI	-	-	K	-	-	-	AI-2E family transporter
PAMFEDIP_01321	9.28e-271	xylR	-	-	GK	-	-	-	ROK family
PAMFEDIP_01322	2.92e-143	-	-	-	-	-	-	-	-
PAMFEDIP_01323	3.66e-295	cfa	2.1.1.79	-	M	ko:K00574	-	ko00000,ko01000	cyclopropane-fatty-acyl-phospholipid synthase
PAMFEDIP_01324	3.32e-210	-	-	-	-	-	-	-	-
PAMFEDIP_01325	1.86e-256	pkn2	-	-	KLT	-	-	-	Protein tyrosine kinase
PAMFEDIP_01326	9.58e-35	-	-	-	S	-	-	-	Protein of unknown function (DUF4064)
PAMFEDIP_01327	2.47e-125	-	-	-	S	-	-	-	Domain of unknown function (DUF4352)
PAMFEDIP_01328	9.69e-99	-	-	-	S	-	-	-	Psort location Cytoplasmic, score
PAMFEDIP_01329	3.73e-131	-	1.5.1.40	-	S	ko:K06988	-	ko00000,ko01000	NADP oxidoreductase coenzyme F420-dependent
PAMFEDIP_01330	2.33e-283	patB	4.4.1.8	-	E	ko:K14155	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko01000,ko01007	Aminotransferase, class I
PAMFEDIP_01331	1.07e-131	-	-	-	M	-	-	-	Protein of unknown function (DUF3737)
PAMFEDIP_01332	1.8e-249	-	-	-	C	-	-	-	Aldo/keto reductase family
PAMFEDIP_01334	0.0	mdlB	-	-	V	ko:K06147,ko:K18890	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
PAMFEDIP_01335	0.0	mdlA	-	-	V	ko:K06148,ko:K18889	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
PAMFEDIP_01336	6.27e-316	-	-	-	EGP	-	-	-	Major Facilitator
PAMFEDIP_01340	2.06e-313	yhgE	-	-	V	ko:K01421	-	ko00000	domain protein
PAMFEDIP_01341	1.23e-123	-	-	-	K	-	-	-	Transcriptional regulator (TetR family)
PAMFEDIP_01342	6.88e-71	-	-	-	K	-	-	-	helix_turn_helix, Arsenical Resistance Operon Repressor
PAMFEDIP_01343	4.36e-197	endA	-	-	F	ko:K15051	-	ko00000	DNA RNA non-specific endonuclease
PAMFEDIP_01344	1.39e-134	yokL3	-	-	J	-	-	-	Acetyltransferase (GNAT) domain
PAMFEDIP_01345	8.76e-126	-	2.3.1.128	-	J	ko:K03790	-	ko00000,ko01000,ko03009	Acetyltransferase (GNAT) domain
PAMFEDIP_01346	2.09e-287	-	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
PAMFEDIP_01347	0.0	ykpA	-	-	S	-	-	-	ABC transporter, ATP-binding protein
PAMFEDIP_01348	5.69e-191	-	3.1.3.102, 3.1.3.104	-	S	ko:K20861	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	hydrolase
PAMFEDIP_01349	0.0	-	-	-	S	-	-	-	Predicted membrane protein (DUF2207)
PAMFEDIP_01350	0.0	uvrA3	-	-	L	ko:K03701	ko03420,map03420	ko00000,ko00001,ko03400	excinuclease ABC
PAMFEDIP_01351	1.35e-264	-	-	-	EGP	-	-	-	Major facilitator Superfamily
PAMFEDIP_01352	1.54e-219	ropB	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
PAMFEDIP_01353	1.76e-298	yxiO	-	-	S	ko:K06902	ko04138,map04138	ko00000,ko00001,ko02000,ko04131	Vacuole effluxer Atg22 like
PAMFEDIP_01354	0.0	npp	-	-	S	-	-	-	type I phosphodiesterase nucleotide pyrophosphatase
PAMFEDIP_01355	9.55e-205	-	-	-	I	-	-	-	alpha/beta hydrolase fold
PAMFEDIP_01356	1.01e-167	treR	-	-	K	ko:K03486	-	ko00000,ko03000	UTRA
PAMFEDIP_01357	0.0	-	-	-	-	-	-	-	-
PAMFEDIP_01358	2e-52	-	-	-	S	-	-	-	Cytochrome B5
PAMFEDIP_01359	8.68e-118	pts21A	-	-	G	ko:K02755	ko02060,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
PAMFEDIP_01360	6.48e-135	-	-	-	T	-	-	-	Diguanylate cyclase, GGDEF domain
PAMFEDIP_01361	1.36e-84	-	-	-	S	-	-	-	Cupredoxin-like domain
PAMFEDIP_01362	1.23e-57	-	-	-	S	-	-	-	Cupredoxin-like domain
PAMFEDIP_01363	0.0	copA	3.6.3.3, 3.6.3.4, 3.6.3.5, 3.6.3.54	-	P	ko:K01533,ko:K01534,ko:K17686	ko01524,ko04016,map01524,map04016	ko00000,ko00001,ko01000	P-type ATPase
PAMFEDIP_01364	6.8e-272	adhC	1.1.1.90	-	C	ko:K00055	ko00350,ko00360,ko00622,ko00623,ko01100,ko01120,ko01220,map00350,map00360,map00622,map00623,map01100,map01120,map01220	ko00000,ko00001,ko00002,ko01000	Zn-dependent alcohol dehydrogenases, class III
PAMFEDIP_01365	4.2e-286	dhaT	1.1.1.202	-	C	ko:K00086	ko00561,ko00640,map00561,map00640	ko00000,ko00001,ko01000	Dehydrogenase
PAMFEDIP_01366	4.8e-86	lysM	-	-	M	-	-	-	LysM domain
PAMFEDIP_01367	0.0	-	-	-	E	-	-	-	Amino Acid
PAMFEDIP_01368	1.43e-184	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
PAMFEDIP_01369	1.97e-92	-	-	-	-	-	-	-	-
PAMFEDIP_01371	2.96e-209	yhxD	-	-	IQ	-	-	-	KR domain
PAMFEDIP_01372	3.23e-290	amd	-	-	E	-	-	-	Peptidase family M20/M25/M40
PAMFEDIP_01374	0.0	XK27_09600	-	-	V	ko:K06147,ko:K18891	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter, ATP-binding protein
PAMFEDIP_01375	0.0	-	-	-	V	ko:K06147,ko:K18892	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
PAMFEDIP_01376	2.31e-277	-	-	-	-	-	-	-	-
PAMFEDIP_01377	0.0	umuC	-	-	L	ko:K03502	-	ko00000,ko03400	impB/mucB/samB family C-terminal domain
PAMFEDIP_01378	7.43e-97	-	-	-	S	-	-	-	Psort location Cytoplasmic, score
PAMFEDIP_01379	3.55e-281	-	-	-	T	-	-	-	diguanylate cyclase
PAMFEDIP_01380	1.92e-155	tag	3.2.2.20	-	L	ko:K01246	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Methyladenine glycosylase
PAMFEDIP_01381	3.57e-120	-	-	-	-	-	-	-	-
PAMFEDIP_01382	5.76e-212	psaA	-	-	P	ko:K02077,ko:K11707	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the bacterial solute-binding protein 9 family
PAMFEDIP_01383	1.58e-72	nudA	-	-	S	-	-	-	ASCH
PAMFEDIP_01384	5.71e-138	-	-	-	S	-	-	-	SdpI/YhfL protein family
PAMFEDIP_01385	7.94e-126	-	-	-	M	-	-	-	Lysin motif
PAMFEDIP_01386	4.61e-101	-	-	-	M	-	-	-	LysM domain
PAMFEDIP_01387	2.1e-99	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
PAMFEDIP_01388	4.32e-235	-	-	-	GM	-	-	-	Male sterility protein
PAMFEDIP_01389	0.0	pbg6	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
PAMFEDIP_01390	0.0	pts23C	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PAMFEDIP_01391	7.47e-70	ptcB	2.7.1.196, 2.7.1.205	-	G	ko:K02760	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
PAMFEDIP_01392	3.91e-100	pts23A	-	-	G	ko:K02777	ko00010,ko00500,ko00520,ko02026,ko02060,ko05111,map00010,map00500,map00520,map02026,map02060,map05111	ko00000,ko00001,ko00002,ko01000,ko02000	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
PAMFEDIP_01393	1.24e-194	-	-	-	K	-	-	-	Helix-turn-helix domain
PAMFEDIP_01394	1.21e-73	-	-	-	-	-	-	-	-
PAMFEDIP_01395	1.58e-204	prpA3	3.1.3.16	-	T	ko:K01090	-	ko00000,ko01000	Calcineurin-like phosphoesterase superfamily domain
PAMFEDIP_01396	2.03e-84	-	-	-	-	-	-	-	-
PAMFEDIP_01397	1.17e-60	ygbF	-	-	S	-	-	-	Sugar efflux transporter for intercellular exchange
PAMFEDIP_01398	6.27e-216	scrK	2.7.1.4	-	GK	ko:K00847	ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100	ko00000,ko00001,ko01000	ROK family
PAMFEDIP_01399	0.0	melA	3.2.1.22	-	G	ko:K07407	ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603	ko00000,ko00001,ko01000	alpha-galactosidase
PAMFEDIP_01400	0.0	scrA	2.7.1.211	-	G	ko:K02808,ko:K02809,ko:K02810	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
PAMFEDIP_01401	0.0	scrB	3.2.1.26	GH32	G	ko:K01193	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	invertase
PAMFEDIP_01402	3.97e-229	scrR	-	-	K	ko:K02529,ko:K03484	-	ko00000,ko03000	Transcriptional regulator, LacI family
PAMFEDIP_01403	0.0	-	3.2.1.10, 3.2.1.20	GH13,GH31	G	ko:K01182,ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Alpha amylase, catalytic domain protein
PAMFEDIP_01404	4.71e-210	-	1.1.1.1	-	C	ko:K00001	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	nadph quinone reductase
PAMFEDIP_01405	0.0	nhaC	-	-	C	ko:K03315	-	ko00000,ko02000	Na H antiporter NhaC
PAMFEDIP_01406	0.0	malL	3.2.1.10, 3.2.1.20	GH13,GH31	G	ko:K01182,ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Alpha amylase, catalytic domain protein
PAMFEDIP_01407	1.63e-163	mleR	-	-	K	-	-	-	LysR substrate binding domain
PAMFEDIP_01408	5.44e-35	mleR	-	-	K	-	-	-	LysR substrate binding domain
PAMFEDIP_01410	1.03e-201	-	-	-	K	ko:K20480	ko02024,map02024	ko00000,ko00001,ko03000	Helix-turn-helix
PAMFEDIP_01411	0.0	oppA	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
PAMFEDIP_01412	0.0	oppA	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
PAMFEDIP_01413	2.65e-102	yiaC	-	-	K	ko:K03826	-	ko00000,ko01000	Acetyltransferase (GNAT) domain
PAMFEDIP_01414	7.52e-241	serA	1.1.1.399, 1.1.1.95	-	EH	ko:K00058	ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PAMFEDIP_01415	1.24e-259	serC	2.6.1.52	-	E	ko:K00831	ko00260,ko00680,ko00750,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map00750,map01100,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
PAMFEDIP_01416	6.7e-148	pgm1	-	-	G	-	-	-	phosphoglycerate mutase
PAMFEDIP_01417	3.38e-227	yghZ	-	-	C	ko:K19265	-	ko00000,ko01000	Aldo keto reductase family protein
PAMFEDIP_01418	6.33e-46	-	-	-	-	-	-	-	-
PAMFEDIP_01419	1.15e-79	-	-	-	S	-	-	-	Domain of unknown function (DU1801)
PAMFEDIP_01420	4.37e-208	fbpA	-	-	K	-	-	-	Domain of unknown function (DUF814)
PAMFEDIP_01421	1.29e-278	ackA	2.7.2.1	-	F	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PAMFEDIP_01422	3.81e-18	-	-	-	-	-	-	-	-
PAMFEDIP_01423	3.18e-77	crcB	-	-	U	ko:K06199	-	ko00000,ko02000	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PAMFEDIP_01424	5.66e-74	crcB	-	-	D	ko:K06199	-	ko00000,ko02000	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PAMFEDIP_01425	2.2e-280	-	-	-	S	ko:K18231,ko:K19349	ko02010,map02010	br01600,ko00000,ko00001,ko01504,ko02000	ATPases associated with a variety of cellular activities
PAMFEDIP_01426	2.89e-312	yfhO	-	-	S	-	-	-	Bacterial membrane protein YfhO
PAMFEDIP_01427	3.66e-189	-	-	-	S	-	-	-	Alpha/beta hydrolase of unknown function (DUF915)
PAMFEDIP_01428	3.36e-216	-	-	-	K	-	-	-	LysR substrate binding domain
PAMFEDIP_01429	2.07e-302	-	-	-	EK	-	-	-	Aminotransferase, class I
PAMFEDIP_01430	2.13e-167	tcyA	-	-	ET	ko:K02424	ko02010,map02010	ko00000,ko00001,ko00002,ko02000,ko02035	Belongs to the bacterial solute-binding protein 3 family
PAMFEDIP_01431	2.11e-158	tcyB	-	-	E	ko:K10009	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
PAMFEDIP_01432	3.02e-176	-	-	-	E	ko:K10010	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
PAMFEDIP_01433	1.26e-161	tcyA	-	-	ET	ko:K02424	ko02010,map02010	ko00000,ko00001,ko00002,ko02000,ko02035	Belongs to the bacterial solute-binding protein 3 family
PAMFEDIP_01434	1.07e-127	-	-	-	KT	-	-	-	response to antibiotic
PAMFEDIP_01435	2.86e-68	-	-	-	K	ko:K10947	-	ko00000,ko03000	Transcriptional regulator
PAMFEDIP_01436	1.73e-132	-	-	-	S	-	-	-	Protein of unknown function (DUF1700)
PAMFEDIP_01437	1.6e-200	-	-	-	S	-	-	-	Putative adhesin
PAMFEDIP_01438	0.0	pts26BCA	2.7.1.211	-	G	ko:K02808,ko:K02809,ko:K02810	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
PAMFEDIP_01439	0.0	malL	3.2.1.20	GH31	G	ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Alpha amylase, catalytic domain protein
PAMFEDIP_01440	1.06e-232	purR2	-	-	K	ko:K02529	-	ko00000,ko03000	Periplasmic binding proteins and sugar binding domain of LacI family
PAMFEDIP_01441	3.73e-263	-	-	-	S	-	-	-	DUF218 domain
PAMFEDIP_01442	2.44e-165	ybbM	-	-	S	ko:K02069	-	ko00000,ko00002,ko02000	Uncharacterised protein family (UPF0014)
PAMFEDIP_01443	2.93e-151	ybbL	-	-	S	ko:K02068	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PAMFEDIP_01444	0.0	rumA_1	2.1.1.190, 2.1.1.35	-	J	ko:K00557,ko:K03215	-	ko00000,ko01000,ko03009,ko03016	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PAMFEDIP_01445	6.26e-101	-	-	-	-	-	-	-	-
PAMFEDIP_01446	2.69e-194	qorB	1.6.5.2	-	GM	ko:K19267	ko00130,ko01110,map00130,map01110	ko00000,ko00001,ko01000	NmrA-like family
PAMFEDIP_01447	3.54e-190	-	-	-	S	-	-	-	haloacid dehalogenase-like hydrolase
PAMFEDIP_01448	2.24e-116	scrK	2.7.1.4	-	GK	ko:K00847	ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100	ko00000,ko00001,ko01000	ROK family
PAMFEDIP_01449	0.0	mngB	3.2.1.170	GH38	G	ko:K15524	-	ko00000,ko01000	Glycosyl hydrolases family 38 N-terminal domain
PAMFEDIP_01450	9.49e-155	fptC	-	-	U	ko:K02770	ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko02000	Phosphotransferase system, EIIC
PAMFEDIP_01451	2.52e-35	-	2.7.1.202	-	G	ko:K02769	ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
PAMFEDIP_01452	5.55e-22	-	-	-	G	ko:K11203	-	ko00000,ko00002,ko02000	PTS system, fructose subfamily
PAMFEDIP_01453	1.5e-104	manR	-	-	GKT	ko:K02538,ko:K03491	-	ko00000,ko03000	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PAMFEDIP_01454	6.92e-206	yicL	-	-	EG	-	-	-	EamA-like transporter family
PAMFEDIP_01455	6.12e-166	-	-	-	E	-	-	-	lipolytic protein G-D-S-L family
PAMFEDIP_01456	3.39e-225	-	4.1.1.52	-	S	ko:K22213	-	ko00000,ko01000	Amidohydrolase
PAMFEDIP_01457	5.93e-144	-	-	-	K	-	-	-	Transcriptional regulator C-terminal region
PAMFEDIP_01458	5.07e-62	-	-	-	K	-	-	-	HxlR-like helix-turn-helix
PAMFEDIP_01459	3.06e-206	ypbG	2.7.1.2	-	GK	ko:K00845	ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	ROK family
PAMFEDIP_01460	0.0	ybfG	-	-	M	-	-	-	peptidoglycan-binding domain-containing protein
PAMFEDIP_01461	9.86e-117	-	-	-	-	-	-	-	-
PAMFEDIP_01462	1.02e-164	lmrA	3.6.3.44	-	V	ko:K02021,ko:K18104	ko01501,ko02010,map01501,map02010	ko00000,ko00001,ko00002,ko01000,ko01504,ko02000	ABC transporter
PAMFEDIP_01463	9.21e-234	lmrA	3.6.3.44	-	V	ko:K02021,ko:K18104	ko01501,ko02010,map01501,map02010	ko00000,ko00001,ko00002,ko01000,ko01504,ko02000	ABC transporter
PAMFEDIP_01464	7.39e-121	-	-	-	K	-	-	-	Transcriptional regulator, MarR family
PAMFEDIP_01465	5.85e-204	ccpB	-	-	K	-	-	-	lacI family
PAMFEDIP_01466	2.21e-154	yceE	-	-	S	-	-	-	haloacid dehalogenase-like hydrolase
PAMFEDIP_01467	8.08e-154	ydgI3	-	-	C	-	-	-	Nitroreductase family
PAMFEDIP_01468	0.0	nagE	2.7.1.193, 2.7.1.199, 2.7.1.208	-	G	ko:K02777,ko:K02802,ko:K02803,ko:K02804,ko:K20107,ko:K20108,ko:K20116,ko:K20117,ko:K20118	ko00010,ko00500,ko00520,ko02026,ko02060,ko05111,map00010,map00500,map00520,map02026,map02060,map05111	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system, EIIB
PAMFEDIP_01469	4.21e-150	-	-	-	S	ko:K05833	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
PAMFEDIP_01470	5.82e-198	WQ51_06230	-	-	U	ko:K05832	-	ko00000,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
PAMFEDIP_01471	6.97e-216	XK27_00670	-	-	S	ko:K01989	-	ko00000,ko00002,ko02000	ABC transporter
PAMFEDIP_01472	0.0	-	-	-	-	-	-	-	-
PAMFEDIP_01473	4.71e-81	-	-	-	-	-	-	-	-
PAMFEDIP_01474	5.52e-242	-	-	-	S	-	-	-	Cell surface protein
PAMFEDIP_01475	1.27e-137	-	-	-	S	-	-	-	WxL domain surface cell wall-binding
PAMFEDIP_01476	5.06e-82	acuB	-	-	S	ko:K04767	-	ko00000	Domain in cystathionine beta-synthase and other proteins.
PAMFEDIP_01477	3.13e-42	acuB	-	-	S	ko:K04767	-	ko00000	Domain in cystathionine beta-synthase and other proteins.
PAMFEDIP_01478	2.78e-158	livF	-	-	E	ko:K01996	ko02010,ko02024,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter
PAMFEDIP_01479	5.21e-180	livG	-	-	E	ko:K01995	ko02010,ko02024,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Branched-chain amino acid ATP-binding cassette transporter
PAMFEDIP_01480	2.29e-193	livM	-	-	E	ko:K01997,ko:K01998	ko02010,ko02024,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Branched-chain amino acid transport system / permease component
PAMFEDIP_01481	4.54e-191	livH	-	-	U	ko:K01997	ko02010,ko02024,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Branched-chain amino acid transport system / permease component
PAMFEDIP_01482	1.04e-269	livJ	-	-	E	ko:K01999	ko02010,ko02024,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Receptor family ligand binding region
PAMFEDIP_01484	1.15e-43	-	-	-	-	-	-	-	-
PAMFEDIP_01485	8.15e-167	-	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
PAMFEDIP_01486	1.93e-31	plnF	-	-	-	-	-	-	-
PAMFEDIP_01487	2.59e-19	-	-	-	-	-	-	-	-
PAMFEDIP_01488	0.0	comA	-	-	V	ko:K06147,ko:K06148,ko:K12292,ko:K20344	ko02010,ko02020,ko02024,map02010,map02020,map02024	ko00000,ko00001,ko01000,ko02000	ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
PAMFEDIP_01489	1.17e-306	mesE	-	-	M	ko:K12293,ko:K20345	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko02000	Transport protein ComB
PAMFEDIP_01490	2.6e-140	-	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
PAMFEDIP_01491	8.02e-152	plnU	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
PAMFEDIP_01492	4.56e-144	-	-	-	V	ko:K07052	-	ko00000	CAAX protease self-immunity
PAMFEDIP_01493	3.74e-144	-	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
PAMFEDIP_01494	4.23e-64	axe	-	-	K	ko:K21498	-	ko00000,ko02048	Helix-turn-helix XRE-family like proteins
PAMFEDIP_01495	0.0	-	-	-	L	-	-	-	DNA helicase
PAMFEDIP_01496	1.38e-179	mtnU	3.5.1.3	-	S	ko:K13566	ko00250,map00250	ko00000,ko00001,ko01000	Carbon-nitrogen hydrolase
PAMFEDIP_01497	2.35e-243	trpS	6.1.1.2	-	J	ko:K01867	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-I aminoacyl-tRNA synthetase family
PAMFEDIP_01498	2.69e-166	-	-	-	K	-	-	-	UbiC transcription regulator-associated domain protein
PAMFEDIP_01499	0.0	chbC	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PAMFEDIP_01500	9.68e-34	-	-	-	-	-	-	-	-
PAMFEDIP_01501	1.69e-97	-	-	-	S	-	-	-	Domain of unknown function (DUF3284)
PAMFEDIP_01502	5.9e-46	-	-	-	-	-	-	-	-
PAMFEDIP_01503	1.6e-77	chpA	-	-	T	ko:K07171	-	ko00000,ko01000,ko02048	PemK-like, MazF-like toxin of type II toxin-antitoxin system
PAMFEDIP_01504	4.87e-243	dus	-	-	J	-	-	-	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PAMFEDIP_01505	1.36e-214	ppx	3.6.1.11, 3.6.1.40	-	FP	ko:K01524	ko00230,map00230	ko00000,ko00001,ko01000	exopolyphosphatase
PAMFEDIP_01506	1.37e-290	mvaA	1.1.1.88, 2.3.1.9	-	C	ko:K00054,ko:K00626	ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the HMG-CoA reductase family
PAMFEDIP_01507	7.71e-228	-	-	-	-	-	-	-	-
PAMFEDIP_01508	3.56e-170	cobB	-	-	K	ko:K12410	-	ko00000,ko01000	SIR2 family
PAMFEDIP_01509	1.12e-205	yunF	-	-	F	-	-	-	Protein of unknown function DUF72
PAMFEDIP_01510	4.64e-92	-	-	-	F	-	-	-	DNA mismatch repair protein MutT
PAMFEDIP_01511	0.0	metG	6.1.1.10	-	J	ko:K01874	ko00450,ko00970,map00450,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
PAMFEDIP_01512	1.81e-273	-	-	-	EGP	ko:K02030	-	ko00000,ko00002,ko02000	Drug resistance transporter Bcr CflA subfamily
PAMFEDIP_01513	2.53e-106	mutR	-	-	K	ko:K20373,ko:K20375	ko02024,map02024	ko00000,ko00001,ko03000	sequence-specific DNA binding
PAMFEDIP_01514	8.59e-85	padC	-	-	Q	ko:K13727	-	ko00000,ko01000	Phenolic acid decarboxylase
PAMFEDIP_01515	1.13e-182	mhpD	-	-	Q	ko:K02509	ko00350,ko01120,map00350,map01120	ko00000,ko00001,ko01000	hydratase
PAMFEDIP_01516	3.66e-113	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
PAMFEDIP_01517	3.3e-202	degV1	-	-	S	-	-	-	DegV family
PAMFEDIP_01518	2.89e-80	-	-	-	K	-	-	-	Bacteriophage CI repressor helix-turn-helix domain
PAMFEDIP_01519	0.0	pepE	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	aminopeptidase
PAMFEDIP_01521	2.76e-141	sip3	3.4.21.89	-	U	ko:K03100	ko02024,ko03060,map02024,map03060	ko00000,ko00001,ko01000,ko01002	Belongs to the peptidase S26 family
PAMFEDIP_01522	0.0	-	-	-	-	-	-	-	-
PAMFEDIP_01524	2.13e-209	-	-	-	S	-	-	-	Bacterial protein of unknown function (DUF916)
PAMFEDIP_01525	2.16e-142	-	-	-	S	-	-	-	Cell surface protein
PAMFEDIP_01526	0.0	gidA	-	-	D	ko:K03495	-	ko00000,ko03016,ko03036	NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
PAMFEDIP_01527	0.0	mnmE	-	-	S	ko:K03650	-	ko00000,ko01000,ko03016	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
PAMFEDIP_01528	2.14e-155	jag	-	-	S	ko:K06346	-	ko00000	R3H domain protein
PAMFEDIP_01529	3.75e-305	-	-	-	Q	-	-	-	Imidazolonepropionase and related amidohydrolases
PAMFEDIP_01530	0.0	oppA	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
PAMFEDIP_01531	1.55e-158	yidC	-	-	U	ko:K03217	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044,ko03029	Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PAMFEDIP_01532	3.74e-75	rnpA	3.1.26.5	-	J	ko:K03536	-	ko00000,ko01000,ko03016	RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
PAMFEDIP_01533	0.0	dnaA	-	-	L	ko:K02313	ko02020,ko04112,map02020,map04112	ko00000,ko00001,ko03032,ko03036	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
PAMFEDIP_01534	8.19e-267	dnaN	2.7.7.7	-	L	ko:K02338	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
PAMFEDIP_01535	3.82e-51	yaaA	-	-	S	ko:K14761	-	ko00000,ko03009	S4 domain protein YaaA
PAMFEDIP_01536	7.24e-263	recF	-	-	L	ko:K03629	ko03440,map03440	ko00000,ko00001,ko03400	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
PAMFEDIP_01537	0.0	gyrB	5.99.1.3	-	L	ko:K02470	-	ko00000,ko01000,ko03032,ko03400	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PAMFEDIP_01538	0.0	gyrA	5.99.1.3	-	L	ko:K02469	-	ko00000,ko01000,ko03032,ko03400	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PAMFEDIP_01539	5.95e-65	rpsF	-	-	J	ko:K02990	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Binds together with S18 to 16S ribosomal RNA
PAMFEDIP_01540	1.59e-95	ssb	-	-	L	ko:K03111	ko03030,ko03430,ko03440,map03030,map03430,map03440	ko00000,ko00001,ko03029,ko03032,ko03400	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
PAMFEDIP_01541	2.69e-47	rpsR	-	-	J	ko:K02963	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
PAMFEDIP_01542	0.0	yybT	-	-	T	-	-	-	signaling protein consisting of a modified GGDEF domain and a DHH domain
PAMFEDIP_01543	3.44e-95	rplI	-	-	J	ko:K02939	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to the 23S rRNA
PAMFEDIP_01544	8.77e-317	dnaB	3.6.4.12	-	L	ko:K02314	ko03030,ko04112,map03030,map04112	ko00000,ko00001,ko01000,ko03032	Participates in initiation and elongation during chromosome replication
PAMFEDIP_01545	4.96e-289	yttB	-	-	EGP	-	-	-	Major Facilitator
PAMFEDIP_01546	9e-184	proB	2.7.2.11	-	F	ko:K00931	ko00330,ko00332,ko01100,ko01130,ko01230,map00330,map00332,map01100,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
PAMFEDIP_01547	2.19e-290	proA	1.2.1.41	-	E	ko:K00147	ko00330,ko00332,ko01100,ko01110,ko01130,ko01230,map00330,map00332,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
PAMFEDIP_01549	0.0	oppA	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
PAMFEDIP_01550	0.0	glgB	2.4.1.18	CBM48,GH13	G	ko:K00700	ko00500,ko01100,ko01110,map00500,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
PAMFEDIP_01551	6.65e-282	glgC	2.7.7.27	-	H	ko:K00975	ko00500,ko00520,ko01100,ko01110,ko02026,map00500,map00520,map01100,map01110,map02026	ko00000,ko00001,ko00002,ko01000	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
PAMFEDIP_01552	3.49e-269	glgD	2.7.7.27	-	G	ko:K00975	ko00500,ko00520,ko01100,ko01110,ko02026,map00500,map00520,map01100,map01110,map02026	ko00000,ko00001,ko00002,ko01000	Nucleotidyl transferase
PAMFEDIP_01553	0.0	glgA	2.4.1.21	GT5	F	ko:K00703	ko00500,ko01100,ko01110,ko02026,map00500,map01100,map01110,map02026	ko00000,ko00001,ko00002,ko01000,ko01003	Synthesizes alpha-1,4-glucan chains using ADP-glucose
PAMFEDIP_01554	0.0	glgP	2.4.1.1	GT35	G	ko:K00688	ko00500,ko01100,ko01110,ko02026,ko04217,ko04910,ko04922,ko04931,map00500,map01100,map01110,map02026,map04217,map04910,map04922,map04931	ko00000,ko00001,ko01000	Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
PAMFEDIP_01555	0.0	malZ	3.2.1.20, 3.2.1.41	CBM48,GH13,GH31	G	ko:K01187,ko:K01200	ko00052,ko00500,ko01100,ko01110,map00052,map00500,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 13 family
PAMFEDIP_01556	1.46e-145	-	-	-	S	-	-	-	haloacid dehalogenase-like hydrolase
PAMFEDIP_01557	1.1e-154	pgmB	5.4.2.6	-	S	ko:K01838	ko00500,map00500	ko00000,ko00001,ko01000	beta-phosphoglucomutase
PAMFEDIP_01558	0.0	trePP	2.4.1.216, 2.4.1.8	GH65	G	ko:K00691,ko:K03731	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	Glycosyl hydrolase family 65 central catalytic domain
PAMFEDIP_01559	3.21e-104	-	-	-	S	-	-	-	Pyridoxamine 5'-phosphate oxidase
PAMFEDIP_01560	4.37e-43	cspL	-	-	K	ko:K03704	-	ko00000,ko03000	Cold shock protein domain
PAMFEDIP_01561	2.54e-50	-	-	-	-	-	-	-	-
PAMFEDIP_01563	2.22e-169	yycF	-	-	K	ko:K07668	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	response regulator
PAMFEDIP_01564	0.0	vicK	2.7.13.3	-	T	ko:K07652	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
PAMFEDIP_01565	3.55e-313	yycH	-	-	S	-	-	-	YycH protein
PAMFEDIP_01566	3.54e-195	yycI	-	-	S	-	-	-	YycH protein
PAMFEDIP_01567	1.71e-200	vicX	3.1.26.11	-	S	ko:K00784	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	domain protein
PAMFEDIP_01568	1.5e-253	htrA	3.4.21.107	-	O	ko:K04771	ko01503,ko02020,map01503,map02020	ko00000,ko00001,ko00002,ko01000,ko01002,ko03110	serine protease
PAMFEDIP_01569	6.08e-107	rlmH	2.1.1.177	-	J	ko:K00783	-	ko00000,ko01000,ko03009	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
PAMFEDIP_01570	3.46e-124	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PAMFEDIP_01571	0.0	-	-	-	C	-	-	-	Belongs to the aldehyde dehydrogenase family
PAMFEDIP_01572	6.96e-214	-	-	-	L	-	-	-	Cleaves both 3' and 5' ssDNA extremities of branched DNA structures
PAMFEDIP_01573	5.97e-157	ung2	-	-	L	-	-	-	Uracil-DNA glycosylase
PAMFEDIP_01574	4.75e-42	pnb	-	-	C	-	-	-	nitroreductase
PAMFEDIP_01575	5.63e-86	pnb	-	-	C	-	-	-	nitroreductase
PAMFEDIP_01576	4.95e-86	-	4.1.2.50, 4.2.3.12	-	H	ko:K01737	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000,ko03016	6-pyruvoyl tetrahydropterin synthase
PAMFEDIP_01577	1.57e-150	-	-	-	S	-	-	-	Elongation factor G-binding protein, N-terminal
PAMFEDIP_01578	0.0	-	-	-	C	-	-	-	FMN_bind
PAMFEDIP_01579	0.0	-	-	-	P	ko:K03319	-	ko00000	Sodium:sulfate symporter transmembrane region
PAMFEDIP_01580	1.46e-204	-	-	-	K	-	-	-	LysR family
PAMFEDIP_01581	2.49e-95	-	-	-	C	-	-	-	FMN binding
PAMFEDIP_01582	4.48e-98	arsC	1.20.4.1	-	T	ko:K03741	-	ko00000,ko01000	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
PAMFEDIP_01583	4.06e-211	-	-	-	S	-	-	-	KR domain
PAMFEDIP_01584	5.74e-204	adc	4.1.1.4	-	Q	ko:K01574	ko00072,ko00640,ko01100,map00072,map00640,map01100	ko00000,ko00001,ko00002,ko01000	Acetoacetate decarboxylase (ADC)
PAMFEDIP_01585	5.07e-157	ydgI	-	-	C	-	-	-	Nitroreductase family
PAMFEDIP_01586	0.0	-	-	-	QT	-	-	-	PucR C-terminal helix-turn-helix domain
PAMFEDIP_01587	1.56e-154	pgmB	5.4.2.6	-	S	ko:K01838	ko00500,map00500	ko00000,ko00001,ko01000	beta-phosphoglucomutase
PAMFEDIP_01588	7.63e-249	pva1	3.5.1.24	-	M	ko:K01442	ko00120,ko00121,ko01100,map00120,map00121,map01100	ko00000,ko00001,ko01000	Linear amide C-N hydrolase, choloylglycine hydrolase family protein
PAMFEDIP_01589	0.0	-	-	-	S	-	-	-	Putative threonine/serine exporter
PAMFEDIP_01590	6.86e-175	ptp1	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Tyrosine phosphatase family
PAMFEDIP_01591	0.0	hpaH	1.14.14.8, 1.14.14.9	-	Q	ko:K00483,ko:K16901	ko00350,ko00380,ko01120,ko01220,map00350,map00380,map01120,map01220	ko00000,ko00001,ko01000	4-hydroxyphenylacetate
PAMFEDIP_01592	1.65e-106	-	-	-	S	-	-	-	ASCH
PAMFEDIP_01593	1.25e-164	-	-	-	F	-	-	-	glutamine amidotransferase
PAMFEDIP_01594	1.67e-220	-	-	-	K	-	-	-	WYL domain
PAMFEDIP_01595	1.63e-152	azoR	-	-	C	ko:K01118	-	ko00000,ko01000	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
PAMFEDIP_01596	0.0	fusA1	-	-	J	-	-	-	elongation factor G
PAMFEDIP_01597	7.44e-51	-	-	-	S	-	-	-	Protein of unknown function
PAMFEDIP_01598	2.7e-79	-	-	-	S	-	-	-	Protein of unknown function
PAMFEDIP_01599	8.64e-195	-	-	-	EG	-	-	-	EamA-like transporter family
PAMFEDIP_01600	7.65e-121	yfbM	-	-	K	-	-	-	FR47-like protein
PAMFEDIP_01601	1.4e-162	-	-	-	S	-	-	-	DJ-1/PfpI family
PAMFEDIP_01602	3.14e-230	-	1.1.1.1	-	C	ko:K00001	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	nadph quinone reductase
PAMFEDIP_01603	1.92e-67	-	-	-	K	-	-	-	helix_turn_helix, Arsenical Resistance Operon Repressor
PAMFEDIP_01604	5.98e-302	mepA	-	-	V	ko:K18908	-	ko00000,ko00002,ko01504,ko02000	MATE efflux family protein
PAMFEDIP_01605	4.77e-215	pepI	3.4.11.5	-	E	ko:K01259	ko00330,map00330	ko00000,ko00001,ko01000,ko01002	Releases the N-terminal proline from various substrates
PAMFEDIP_01606	7.76e-181	XK27_08125	-	-	S	ko:K09861	-	ko00000	Belongs to the UPF0246 family
PAMFEDIP_01607	2.38e-99	-	-	-	-	-	-	-	-
PAMFEDIP_01608	0.0	oppA	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding proteins, family 5 Middle
PAMFEDIP_01609	2.4e-180	-	-	-	-	-	-	-	-
PAMFEDIP_01610	4.07e-05	-	-	-	-	-	-	-	-
PAMFEDIP_01611	5.66e-184	ant1	2.7.7.47	-	H	ko:K00984	-	ko00000,ko01000,ko01504	Mediates bacterial resistance to the antibiotics streptomycin and spectomycin
PAMFEDIP_01612	1.67e-54	-	-	-	-	-	-	-	-
PAMFEDIP_01613	4.29e-166	-	-	-	P	ko:K02006	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
PAMFEDIP_01614	9.79e-192	-	-	-	P	ko:K02008	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Cobalt transport protein
PAMFEDIP_01615	1.84e-235	cbiM	-	-	P	ko:K02007	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	PDGLE domain
PAMFEDIP_01616	1.15e-155	rcfB	-	-	K	-	-	-	Crp-like helix-turn-helix domain
PAMFEDIP_01617	7.9e-306	larA	5.1.2.1	-	S	ko:K22373	ko00620,map00620	ko00000,ko00001,ko01000	Domain of unknown function (DUF2088)
PAMFEDIP_01618	1.78e-160	larB	-	-	S	ko:K06898	-	ko00000	AIR carboxylase
PAMFEDIP_01619	3.58e-174	larC	4.99.1.12	-	S	ko:K09121	-	ko00000,ko01000	Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2 ), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor- dependent enzymes
PAMFEDIP_01620	1.19e-170	glpF	-	-	U	ko:K02440	-	ko00000,ko02000	Belongs to the MIP aquaporin (TC 1.A.8) family
PAMFEDIP_01621	2.6e-193	larE	-	-	S	ko:K06864	-	ko00000	NAD synthase
PAMFEDIP_01622	7.11e-227	-	-	-	C	-	-	-	Zinc-binding dehydrogenase
PAMFEDIP_01623	1.87e-175	thiM	2.7.1.50	-	H	ko:K00878	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
PAMFEDIP_01624	7.44e-192	thiD	2.7.1.49, 2.7.4.7	-	H	ko:K00941	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Phosphomethylpyrimidine kinase
PAMFEDIP_01625	1.61e-144	thiE	2.5.1.3	-	H	ko:K00788	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)
PAMFEDIP_01626	1.45e-261	thiP	-	-	U	-	-	-	Belongs to the purine-cytosine permease (2.A.39) family
PAMFEDIP_01627	2.39e-174	puuD	-	-	S	ko:K07010	-	ko00000,ko01002	peptidase C26
PAMFEDIP_01628	0.0	-	-	-	L	-	-	-	HIRAN domain
PAMFEDIP_01629	1.24e-109	-	3.6.1.55	-	F	ko:K03574	-	ko00000,ko01000,ko03400	NUDIX domain
PAMFEDIP_01630	0.0	yifK	-	-	E	ko:K03293	-	ko00000	Amino acid permease
PAMFEDIP_01631	5.18e-159	-	-	-	-	-	-	-	-
PAMFEDIP_01632	2.07e-191	-	-	-	I	-	-	-	Alpha/beta hydrolase family
PAMFEDIP_01633	0.0	pacL1	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	P-type ATPase
PAMFEDIP_01634	1.34e-183	-	-	-	F	-	-	-	Phosphorylase superfamily
PAMFEDIP_01635	2.92e-38	pspC	-	-	KT	ko:K03973	-	ko00000,ko02048,ko03000	PspC domain
PAMFEDIP_01636	1.72e-142	azo1	1.5.1.36, 1.7.1.6	-	S	ko:K03206,ko:K19784,ko:K22393	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	NADPH-dependent FMN reductase
PAMFEDIP_01637	1.27e-98	-	-	-	K	-	-	-	Transcriptional regulator
PAMFEDIP_01638	3.99e-96	hsp1	-	-	O	ko:K13993	ko04141,map04141	ko00000,ko00001,ko03110	Belongs to the small heat shock protein (HSP20) family
PAMFEDIP_01639	5.51e-106	-	-	-	S	-	-	-	Protein of unknown function (DUF3021)
PAMFEDIP_01640	5.38e-290	-	-	-	EGP	ko:K08161	-	ko00000,ko02000	Transporter, major facilitator family protein
PAMFEDIP_01641	3.98e-68	-	-	-	K	-	-	-	helix_turn_helix, Arsenical Resistance Operon Repressor
PAMFEDIP_01642	2.79e-274	yycB	-	-	P	ko:K03449	-	ko00000,ko02000	Transporter, major facilitator family protein
PAMFEDIP_01644	2.16e-204	morA	-	-	S	-	-	-	reductase
PAMFEDIP_01645	8.21e-213	-	1.1.1.65	-	C	ko:K05275	ko00750,ko01100,ko01120,map00750,map01100,map01120	ko00000,ko00001,ko01000	Aldo keto reductase
PAMFEDIP_01646	1.92e-106	-	-	-	F	-	-	-	Nucleoside 2-deoxyribosyltransferase like
PAMFEDIP_01647	0.0	l1n	4.2.1.53	-	S	ko:K10254	-	ko00000,ko01000	Myosin-crossreactive antigen
PAMFEDIP_01648	7.45e-103	-	-	-	-	-	-	-	-
PAMFEDIP_01649	0.0	-	-	-	-	-	-	-	-
PAMFEDIP_01650	6.49e-268	-	-	-	C	-	-	-	Oxidoreductase
PAMFEDIP_01651	3.28e-193	cbiQ	-	-	P	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	cobalt transport
PAMFEDIP_01652	0.0	ykoD	-	-	P	ko:K16786,ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
PAMFEDIP_01653	2.57e-128	-	-	-	S	ko:K16924	-	ko00000,ko00002,ko02000	UPF0397 protein
PAMFEDIP_01655	4.37e-167	-	-	-	K	ko:K03492	-	ko00000,ko03000	UbiC transcription regulator-associated domain protein
PAMFEDIP_01656	4.14e-72	-	-	-	K	-	-	-	Transcriptional regulator PadR-like family
PAMFEDIP_01657	2.09e-171	-	-	-	-	-	-	-	-
PAMFEDIP_01658	1.57e-191	-	-	-	-	-	-	-	-
PAMFEDIP_01659	3.37e-115	-	-	-	-	-	-	-	-
PAMFEDIP_01660	1.01e-184	dhrS4	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Oxidoreductase, short chain dehydrogenase reductase family protein
PAMFEDIP_01661	6.03e-218	ybhF_1	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter
PAMFEDIP_01662	0.0	-	-	-	M	ko:K01992	-	ko00000,ko00002,ko02000	Exporter of polyketide antibiotics
PAMFEDIP_01663	8.03e-151	-	-	-	K	ko:K09017	-	ko00000,ko03000	Transcriptional regulator
PAMFEDIP_01664	0.0	etfA	1.3.1.108	-	C	ko:K03522,ko:K22432	-	ko00000,ko01000,ko04147	Electron transfer flavoprotein FAD-binding domain
PAMFEDIP_01665	9.67e-98	-	-	-	T	-	-	-	ECF transporter, substrate-specific component
PAMFEDIP_01667	5.29e-121	XK27_02085	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PAMFEDIP_01668	2.35e-243	dhaK2	2.7.1.28, 2.7.1.29, 4.6.1.15	-	G	ko:K00863	ko00051,ko00561,ko00680,ko01100,ko01120,ko01200,ko04622,map00051,map00561,map00680,map01100,map01120,map01200,map04622	ko00000,ko00001,ko00002,ko01000	Dak1 domain
PAMFEDIP_01669	3.05e-236	dhaK	2.7.1.121	-	G	ko:K05878	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Dak1 domain
PAMFEDIP_01670	7.88e-131	dhaL	2.7.1.121	-	S	ko:K05879	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Dak2
PAMFEDIP_01671	6.76e-75	dhaM	2.7.1.121	-	S	ko:K05881	ko00561,map00561	ko00000,ko00001,ko01000,ko02000	PTS system fructose IIA component
PAMFEDIP_01672	2.32e-171	glpF	-	-	U	ko:K02440	-	ko00000,ko02000	Belongs to the MIP aquaporin (TC 1.A.8) family
PAMFEDIP_01673	2.65e-245	malR1	-	-	K	ko:K02529	-	ko00000,ko03000	Transcriptional regulator, LacI family
PAMFEDIP_01674	1.83e-231	yvdE	-	-	K	-	-	-	helix_turn _helix lactose operon repressor
PAMFEDIP_01675	0.0	malA1	3.2.1.10, 3.2.1.20	GH13,GH31	G	ko:K01182,ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Alpha amylase, catalytic domain
PAMFEDIP_01676	1.74e-184	yxeH	-	-	S	-	-	-	hydrolase
PAMFEDIP_01677	0.0	tkt	2.2.1.1	-	H	ko:K00615	ko00030,ko00710,ko01051,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01051,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
PAMFEDIP_01678	1.68e-146	tal	2.2.1.2	-	F	ko:K00616	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
PAMFEDIP_01679	1.17e-305	ulaA	-	-	S	ko:K03475	ko00053,ko01100,ko01120,ko02060,map00053,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko02000	PTS system sugar-specific permease component
PAMFEDIP_01680	7.29e-61	ulaB	2.7.1.194	-	G	ko:K02822	ko00053,ko01100,ko01120,ko02060,map00053,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphotransferase system galactitol-specific IIB component
PAMFEDIP_01681	1.58e-101	-	2.7.1.194	-	G	ko:K02821	ko00053,ko01100,ko01120,ko02060,map00053,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PAMFEDIP_01682	0.0	-	-	-	G	ko:K03483	-	ko00000,ko03000	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PAMFEDIP_01683	9.14e-146	gph3	-	-	S	-	-	-	Haloacid dehalogenase-like hydrolase
PAMFEDIP_01684	5.26e-247	-	1.1.1.14	-	C	ko:K00008	ko00040,ko00051,ko01100,map00040,map00051,map01100	ko00000,ko00001,ko00002,ko01000	Zinc-binding dehydrogenase
PAMFEDIP_01685	8.37e-296	gatC	-	-	G	ko:K02775	ko00052,ko01100,ko02060,map00052,map01100,map02060	ko00000,ko00001,ko00002,ko02000	PTS system sugar-specific permease component
PAMFEDIP_01686	6e-60	-	2.7.1.200	-	G	ko:K02774	ko00052,ko01100,ko02060,map00052,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
PAMFEDIP_01687	3.99e-106	-	2.7.1.200, 2.7.1.204	-	G	ko:K02773,ko:K20112	ko00052,ko01100,ko02060,map00052,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PAMFEDIP_01688	1.83e-146	-	-	-	K	ko:K02444	-	ko00000,ko03000	DeoR C terminal sensor domain
PAMFEDIP_01689	0.0	xfp	4.1.2.22, 4.1.2.9	-	G	ko:K01621	ko00030,ko00710,ko01100,ko01120,map00030,map00710,map01100,map01120	ko00000,ko00001,ko01000	Phosphoketolase
PAMFEDIP_01690	3.76e-180	-	-	-	K	-	-	-	Helix-turn-helix domain, rpiR family
PAMFEDIP_01691	6.47e-95	-	-	-	S	-	-	-	Protein of unknown function (DUF1694)
PAMFEDIP_01692	8.16e-48	-	-	-	I	-	-	-	alpha/beta hydrolase fold
PAMFEDIP_01693	3.21e-127	-	-	-	I	-	-	-	alpha/beta hydrolase fold
PAMFEDIP_01694	3.89e-205	-	-	-	I	-	-	-	alpha/beta hydrolase fold
PAMFEDIP_01695	0.0	-	-	-	E	ko:K03307	-	ko00000	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
PAMFEDIP_01696	4.01e-263	napA	-	-	P	-	-	-	Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
PAMFEDIP_01697	9.03e-173	-	-	-	G	-	-	-	Xylose isomerase domain protein TIM barrel
PAMFEDIP_01698	1.33e-196	nanK	-	-	GK	-	-	-	ROK family
PAMFEDIP_01699	1.86e-210	nanA	4.1.3.3	-	EM	ko:K01639	ko00520,map00520	ko00000,ko00001,ko01000	Neu5Ac) to form pyruvate and N-acetylmannosamine (ManNAc) via a Schiff base intermediate
PAMFEDIP_01700	2.13e-159	nanE	5.1.3.9	-	G	ko:K01788	ko00520,map00520	ko00000,ko00001,ko01000	Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
PAMFEDIP_01701	5.6e-292	-	-	-	S	-	-	-	Pyridine nucleotide-disulphide oxidoreductase
PAMFEDIP_01702	1.82e-34	-	-	-	S	-	-	-	Immunity protein 74
PAMFEDIP_01703	6.75e-85	-	-	-	M	-	-	-	dTDP-4-dehydrorhamnose reductase activity
PAMFEDIP_01704	0.0	-	-	-	M	-	-	-	domain protein
PAMFEDIP_01705	2.14e-174	glpF	-	-	U	ko:K02440	-	ko00000,ko02000	Belongs to the MIP aquaporin (TC 1.A.8) family
PAMFEDIP_01706	0.0	glpD	1.1.3.21, 1.1.5.3	-	C	ko:K00105,ko:K00111	ko00564,ko01110,map00564,map01110	ko00000,ko00001,ko01000	C-terminal domain of alpha-glycerophosphate oxidase
PAMFEDIP_01707	0.0	glpK	2.7.1.30	-	F	ko:K00864	ko00561,ko01100,ko03320,ko04626,map00561,map01100,map03320,map04626	ko00000,ko00001,ko01000,ko04147	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
PAMFEDIP_01708	0.0	gshR	1.8.1.7	-	C	ko:K00383	ko00480,ko04918,map00480,map04918	ko00000,ko00001,ko01000	Glutathione reductase
PAMFEDIP_01709	2.7e-230	proV	-	-	E	ko:K05847	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter, ATP-binding protein
PAMFEDIP_01710	0.0	proWX	-	-	EM	ko:K05845,ko:K05846	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Periplasmic glycine betaine choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)
PAMFEDIP_01711	4.06e-102	-	3.1.26.4	-	L	ko:K03469	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	RNA-DNA hybrid ribonuclease activity
PAMFEDIP_01712	2.42e-207	yneD	-	-	S	-	-	-	Belongs to the short-chain dehydrogenases reductases (SDR) family
PAMFEDIP_01713	1.49e-223	rihA	3.2.2.1	-	F	ko:K01239,ko:K01250,ko:K12700	ko00230,ko00760,ko01100,map00230,map00760,map01100	ko00000,ko00001,ko01000	Nucleoside
PAMFEDIP_01714	2.32e-101	accB3	-	-	I	ko:K02160	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002	first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
PAMFEDIP_01715	2.16e-103	-	-	-	-	-	-	-	-
PAMFEDIP_01716	5.89e-108	-	-	-	K	-	-	-	Winged helix-turn-helix transcription repressor, HrcA DNA-binding
PAMFEDIP_01717	1.54e-292	-	-	-	N	ko:K09384	-	ko00000	Uncharacterized conserved protein (DUF2075)
PAMFEDIP_01718	1.31e-124	yxkA	-	-	S	ko:K06910	-	ko00000	Phosphatidylethanolamine-binding protein
PAMFEDIP_01719	5.34e-72	-	-	-	S	ko:K08987	-	ko00000	Protein of unknown function (DUF1304)
PAMFEDIP_01720	0.0	sufI	-	-	Q	-	-	-	Multicopper oxidase
PAMFEDIP_01721	8.36e-154	rpiA2	5.3.1.6	-	G	ko:K01807	ko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
PAMFEDIP_01722	1.99e-26	zmp1	-	-	O	-	-	-	Zinc-dependent metalloprotease
PAMFEDIP_01723	8.95e-60	-	-	-	-	-	-	-	-
PAMFEDIP_01724	1.05e-225	hicD1	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	Belongs to the LDH MDH superfamily
PAMFEDIP_01725	1.89e-169	-	-	-	S	-	-	-	KR domain
PAMFEDIP_01726	2.56e-83	-	-	-	K	-	-	-	HxlR-like helix-turn-helix
PAMFEDIP_01727	1.62e-62	-	-	-	S	-	-	-	Domain of unknown function (DUF1905)
PAMFEDIP_01728	0.0	-	-	-	M	-	-	-	Glycosyl hydrolases family 25
PAMFEDIP_01729	0.0	gabD	1.2.1.16, 1.2.1.20, 1.2.1.79	-	C	ko:K00135	ko00250,ko00310,ko00350,ko00650,ko00760,ko01100,ko01120,map00250,map00310,map00350,map00650,map00760,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Belongs to the aldehyde dehydrogenase family
PAMFEDIP_01730	2.09e-213	-	-	-	GM	-	-	-	NmrA-like family
PAMFEDIP_01731	1.15e-124	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PAMFEDIP_01732	5.93e-281	blpH	2.7.13.3	-	T	ko:K07706	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	GHKL domain
PAMFEDIP_01733	6.58e-173	-	-	-	K	ko:K07707	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko02022	LytTr DNA-binding domain
PAMFEDIP_01734	0.0	asnB	6.3.5.4	-	E	ko:K01953	ko00250,ko01100,ko01110,map00250,map01100,map01110	ko00000,ko00001,ko01000,ko01002	Asparagine synthase
PAMFEDIP_01735	7.81e-148	-	-	-	M	-	-	-	ErfK YbiS YcfS YnhG
PAMFEDIP_01736	5.78e-269	-	-	-	EGP	-	-	-	Major Facilitator
PAMFEDIP_01737	3.25e-81	ytcD	-	-	K	-	-	-	Transcriptional regulator, HxlR family
PAMFEDIP_01738	1.06e-149	-	-	-	S	-	-	-	Haloacid dehalogenase-like hydrolase
PAMFEDIP_01739	4.13e-157	-	-	-	-	-	-	-	-
PAMFEDIP_01740	7.39e-300	-	-	-	NU	-	-	-	Mycoplasma protein of unknown function, DUF285
PAMFEDIP_01741	1.47e-83	-	-	-	-	-	-	-	-
PAMFEDIP_01742	3.15e-130	-	-	-	S	-	-	-	WxL domain surface cell wall-binding
PAMFEDIP_01743	2.16e-241	ynjC	-	-	S	-	-	-	Cell surface protein
PAMFEDIP_01744	2.63e-146	-	-	-	S	-	-	-	GyrI-like small molecule binding domain
PAMFEDIP_01745	5.83e-87	-	-	-	S	-	-	-	Iron-sulphur cluster biosynthesis
PAMFEDIP_01746	6.57e-226	-	-	-	C	-	-	-	Alcohol dehydrogenase GroES-like domain
PAMFEDIP_01747	5.11e-59	-	-	-	S	-	-	-	Bacteriophage holin
PAMFEDIP_01748	2.53e-47	-	-	-	S	-	-	-	Haemolysin XhlA
PAMFEDIP_01749	1.7e-255	-	-	-	M	-	-	-	Glycosyl hydrolases family 25
PAMFEDIP_01751	1.4e-27	-	-	-	-	-	-	-	-
PAMFEDIP_01752	1.4e-108	-	-	-	-	-	-	-	-
PAMFEDIP_01756	8.28e-127	-	-	-	S	-	-	-	Domain of unknown function (DUF2479)
PAMFEDIP_01757	2.64e-220	-	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase family
PAMFEDIP_01758	0.0	-	-	-	M	-	-	-	Prophage endopeptidase tail
PAMFEDIP_01759	9.72e-173	-	-	-	S	-	-	-	phage tail
PAMFEDIP_01760	0.0	-	-	-	D	-	-	-	domain protein
PAMFEDIP_01762	5.37e-107	-	-	-	S	-	-	-	Phage tail assembly chaperone protein, TAC
PAMFEDIP_01763	2.09e-123	-	-	-	-	-	-	-	-
PAMFEDIP_01764	5.59e-81	-	-	-	-	-	-	-	-
PAMFEDIP_01765	9.66e-123	-	-	-	-	-	-	-	-
PAMFEDIP_01766	5.46e-67	-	-	-	-	-	-	-	-
PAMFEDIP_01767	3.11e-75	-	-	-	S	-	-	-	Phage gp6-like head-tail connector protein
PAMFEDIP_01768	2.45e-247	gpG	-	-	-	-	-	-	-
PAMFEDIP_01769	2.66e-110	-	-	-	S	-	-	-	Domain of unknown function (DUF4355)
PAMFEDIP_01770	5.76e-216	-	-	-	S	-	-	-	Phage Mu protein F like protein
PAMFEDIP_01771	0.0	-	-	-	S	-	-	-	Phage portal protein, SPP1 Gp6-like
PAMFEDIP_01772	2.91e-316	-	-	-	S	ko:K06909	-	ko00000	Phage terminase, large subunit
PAMFEDIP_01774	3.13e-98	-	-	-	L	ko:K07474	-	ko00000	Terminase small subunit
PAMFEDIP_01777	7.56e-25	-	-	-	-	-	-	-	-
PAMFEDIP_01778	1.15e-40	-	-	-	S	-	-	-	ASCH
PAMFEDIP_01779	1.72e-15	-	-	-	K	-	-	-	acetyltransferase
PAMFEDIP_01780	0.0	clpL	-	-	O	ko:K04086	-	ko00000,ko03110	C-terminal, D2-small domain, of ClpB protein
PAMFEDIP_01782	8.76e-72	lctO	1.13.12.4	-	C	ko:K00467,ko:K10530	ko00620,map00620	ko00000,ko00001,ko01000	L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases
PAMFEDIP_01783	6.67e-165	lctO	1.13.12.4	-	C	ko:K00467,ko:K10530	ko00620,map00620	ko00000,ko00001,ko01000	L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases
PAMFEDIP_01784	0.0	pox4	1.2.3.3	-	EH	ko:K00158	ko00620,ko01100,map00620,map01100	ko00000,ko00001,ko01000	Belongs to the TPP enzyme family
PAMFEDIP_01785	5.03e-95	-	-	-	K	-	-	-	Transcriptional regulator
PAMFEDIP_01786	0.0	spxB	1.2.3.3	-	EH	ko:K00158	ko00620,ko01100,map00620,map01100	ko00000,ko00001,ko01000	Belongs to the TPP enzyme family
PAMFEDIP_01787	6.96e-83	pts38A	2.7.1.198	-	G	ko:K02781	ko00051,ko02060,map00051,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system glucitol/sorbitol-specific IIA component
PAMFEDIP_01788	5.88e-233	srlE	2.7.1.198	-	G	ko:K02782,ko:K02783	ko00051,ko02060,map00051,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Sorbitol phosphotransferase enzyme II N-terminus
PAMFEDIP_01789	1.23e-129	srlA	-	-	G	ko:K02783	ko00051,ko02060,map00051,map02060	ko00000,ko00001,ko00002,ko02000	PTS system enzyme II sorbitol-specific factor
PAMFEDIP_01790	3.33e-113	srlM1	-	-	K	-	-	-	Glucitol operon activator protein (GutM)
PAMFEDIP_01791	0.0	srlM	-	-	GKT	ko:K03491	-	ko00000,ko03000	Mga helix-turn-helix domain
PAMFEDIP_01792	1.56e-185	srlD2	1.1.1.140	-	IQ	ko:K00068	ko00051,map00051	ko00000,ko00001,ko01000	NAD dependent epimerase/dehydratase family
PAMFEDIP_01793	2.53e-209	rbsU	-	-	U	ko:K06216	-	ko00000,ko02000	ribose uptake protein RbsU
PAMFEDIP_01794	2.03e-87	rbsD	5.4.99.62	-	G	ko:K06726	ko02010,map02010	ko00000,ko00001,ko01000	Catalyzes the interconversion of beta-pyran and beta- furan forms of D-ribose
PAMFEDIP_01795	4.52e-209	rbsK	2.7.1.15	-	H	ko:K00852	ko00030,map00030	ko00000,ko00001,ko01000	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PAMFEDIP_01796	1.88e-240	rbsR	-	-	K	ko:K02529,ko:K03484	-	ko00000,ko03000	helix_turn _helix lactose operon repressor
PAMFEDIP_01797	3.36e-06	-	-	-	K	ko:K07726	-	ko00000,ko03000	Helix-turn-helix XRE-family like proteins
PAMFEDIP_01798	1.48e-08	-	-	-	-	-	-	-	-
PAMFEDIP_01799	1.23e-26	-	-	-	-	-	-	-	-
PAMFEDIP_01800	0.0	ftsK	-	-	D	ko:K03466	-	ko00000,ko03036	Belongs to the FtsK SpoIIIE SftA family
PAMFEDIP_01801	4.97e-124	cspR	2.1.1.207	-	J	ko:K03216	-	ko00000,ko01000,ko03016	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
PAMFEDIP_01802	2.5e-147	-	-	-	S	ko:K07118	-	ko00000	NAD(P)H-binding
PAMFEDIP_01803	3.59e-301	brnQ	-	-	U	ko:K03311	-	ko00000	Component of the transport system for branched-chain amino acids
PAMFEDIP_01805	1.12e-207	rrmA	2.1.1.187	-	H	ko:K00563,ko:K10947	-	ko00000,ko01000,ko03000,ko03009	Methyltransferase
PAMFEDIP_01806	4.82e-55	rpsN	-	-	J	ko:K02954	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PAMFEDIP_01807	9.52e-264	XK27_05220	-	-	S	-	-	-	AI-2E family transporter
PAMFEDIP_01808	2.68e-75	srlB	2.7.1.198	-	G	ko:K02781	ko00051,ko02060,map00051,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system glucitol/sorbitol-specific IIA component
PAMFEDIP_01809	1.6e-246	pgl	3.1.1.31	-	G	ko:K07404	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Lactonase, 7-bladed beta-propeller
PAMFEDIP_01810	7.21e-150	cutC	-	-	P	ko:K06201	-	ko00000	Participates in the control of copper homeostasis
PAMFEDIP_01811	6.31e-222	yjbO	5.4.99.23	-	G	ko:K06180	-	ko00000,ko01000,ko03009	Responsible for synthesis of pseudouridine from uracil
PAMFEDIP_01812	1.29e-193	nadK	2.7.1.23	-	F	ko:K00858	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
PAMFEDIP_01813	9.08e-157	yjbM	2.7.6.5	-	S	ko:K07816	ko00230,map00230	ko00000,ko00001,ko01000	RelA SpoT domain protein
PAMFEDIP_01814	2.24e-148	yjbH	-	-	Q	-	-	-	Thioredoxin
PAMFEDIP_01815	0.0	pepF	-	-	E	ko:K08602	-	ko00000,ko01000,ko01002	oligoendopeptidase F
PAMFEDIP_01816	1.52e-231	coiA	-	-	S	ko:K06198	-	ko00000	Competence protein
PAMFEDIP_01817	1.64e-17	coiA	-	-	S	ko:K06198	-	ko00000	Competence protein
PAMFEDIP_01818	7.12e-170	mecA	-	-	NOT	ko:K16511	-	ko00000	Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
PAMFEDIP_01819	9.28e-89	spxA	-	-	K	ko:K16509	-	ko00000	Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
PAMFEDIP_01820	2.81e-178	yhfI	-	-	S	-	-	-	Metallo-beta-lactamase superfamily
PAMFEDIP_01821	1.08e-117	traP	1.14.99.57	-	S	ko:K21481	-	ko00000,ko01000	enzyme involved in biosynthesis of extracellular polysaccharides
PAMFEDIP_01834	2.56e-131	-	-	-	T	-	-	-	Diguanylate cyclase, GGDEF domain
PAMFEDIP_01835	8.07e-163	-	-	-	T	-	-	-	Putative diguanylate phosphodiesterase
PAMFEDIP_01836	6.36e-134	nrdG	1.97.1.4	-	O	ko:K04068	-	ko00000,ko01000	Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PAMFEDIP_01837	0.0	nrdD	1.1.98.6	-	F	ko:K21636	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Ribonucleoside-triphosphate reductase
PAMFEDIP_01838	1.56e-108	-	-	-	-	-	-	-	-
PAMFEDIP_01839	5.97e-96	def2	3.5.1.88	-	J	ko:K01462	-	ko00000,ko01000	Removes the formyl group from the N-terminal Met of newly synthesized proteins
PAMFEDIP_01840	9.2e-243	apbE	2.7.1.180	-	H	ko:K03734	-	ko00000,ko01000	Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
PAMFEDIP_01841	7.3e-245	dus	-	-	J	-	-	-	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PAMFEDIP_01842	3.7e-30	-	-	-	-	-	-	-	-
PAMFEDIP_01843	1.38e-131	-	-	-	-	-	-	-	-
PAMFEDIP_01844	3.46e-210	-	-	-	K	-	-	-	LysR substrate binding domain
PAMFEDIP_01845	4.34e-314	-	-	-	P	-	-	-	Sodium:sulfate symporter transmembrane region
PAMFEDIP_01846	0.0	-	4.1.1.98	-	H	ko:K03182	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	3-octaprenyl-4-hydroxybenzoate carboxy-lyase
PAMFEDIP_01847	0.0	tcaA	-	-	S	ko:K21463	-	ko00000	response to antibiotic
PAMFEDIP_01848	1.37e-182	-	-	-	S	-	-	-	zinc-ribbon domain
PAMFEDIP_01850	4.29e-50	-	-	-	-	-	-	-	-
PAMFEDIP_01851	1.4e-137	-	-	-	S	ko:K06889	-	ko00000	Alpha/beta hydrolase family
PAMFEDIP_01852	1.4e-20	-	-	-	S	ko:K06889	-	ko00000	Alpha/beta hydrolase family
PAMFEDIP_01853	2.35e-231	-	-	-	S	ko:K07035	-	ko00000	Phosphotransferase system, EIIC
PAMFEDIP_01854	0.0	-	-	-	I	-	-	-	acetylesterase activity
PAMFEDIP_01855	6.08e-78	-	-	-	M	-	-	-	Collagen binding domain
PAMFEDIP_01856	4.63e-24	-	-	-	-	-	-	-	-
PAMFEDIP_01857	1.25e-25	-	-	-	-	-	-	-	-
PAMFEDIP_01858	9.85e-22	-	-	-	-	-	-	-	-
PAMFEDIP_01859	2.69e-23	-	-	-	-	-	-	-	-
PAMFEDIP_01860	9.05e-22	-	-	-	-	-	-	-	-
PAMFEDIP_01861	1.46e-121	inlJ	-	-	M	-	-	-	MucBP domain
PAMFEDIP_01862	0.0	-	-	-	D	-	-	-	nuclear chromosome segregation
PAMFEDIP_01863	1.27e-109	-	-	-	K	-	-	-	MarR family
PAMFEDIP_01864	9.28e-58	-	-	-	-	-	-	-	-
PAMFEDIP_01865	1.28e-51	-	-	-	-	-	-	-	-
PAMFEDIP_01866	1.79e-289	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
PAMFEDIP_01867	1.1e-06	-	-	-	K	ko:K07727	-	ko00000,ko03000	transcriptional regulator
PAMFEDIP_01870	2.62e-40	-	-	-	-	-	-	-	-
PAMFEDIP_01871	1.5e-187	-	-	-	L	-	-	-	DNA replication protein
PAMFEDIP_01872	0.0	-	-	-	S	-	-	-	Virulence-associated protein E
PAMFEDIP_01873	3.36e-96	-	-	-	-	-	-	-	-
PAMFEDIP_01875	3.24e-62	-	-	-	S	-	-	-	Head-tail joining protein
PAMFEDIP_01876	1.05e-88	-	-	-	L	ko:K07451	-	ko00000,ko01000,ko02048	Phage-associated protein
PAMFEDIP_01877	1.9e-109	terS	-	-	L	-	-	-	Phage terminase, small subunit
PAMFEDIP_01878	0.0	terL	-	-	S	-	-	-	overlaps another CDS with the same product name
PAMFEDIP_01880	6.16e-260	-	-	-	S	-	-	-	Phage portal protein
PAMFEDIP_01881	0.0	-	-	-	S	ko:K06904	-	ko00000	Caudovirus prohead serine protease
PAMFEDIP_01882	1.75e-48	-	-	-	S	-	-	-	Phage gp6-like head-tail connector protein
PAMFEDIP_01883	1.02e-80	-	-	-	-	-	-	-	-
PAMFEDIP_01884	7.81e-148	upp	2.4.2.9	-	F	ko:K00761	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
PAMFEDIP_01885	3.04e-297	glyA	2.1.2.1	-	E	ko:K00600	ko00260,ko00460,ko00630,ko00670,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko01523,map00260,map00460,map00630,map00670,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map01523	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
PAMFEDIP_01886	1.79e-243	ywlC	2.7.7.87	-	J	ko:K07566	-	ko00000,ko01000,ko03009,ko03016	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
PAMFEDIP_01887	3.44e-204	prmC	2.1.1.297	-	J	ko:K02493	-	ko00000,ko01000,ko03012	Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
PAMFEDIP_01888	1.88e-251	prfA	-	-	J	ko:K02835	-	ko00000,ko03012	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
PAMFEDIP_01889	1.54e-141	tdk	2.7.1.21	-	F	ko:K00857	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	thymidine kinase
PAMFEDIP_01890	0.0	murE2	6.3.2.13	-	M	ko:K01928	ko00300,ko00550,map00300,map00550	ko00000,ko00001,ko01000,ko01011	Domain of unknown function (DUF1727)
PAMFEDIP_01891	3.04e-174	cobQ	-	-	S	ko:K07009	-	ko00000	glutamine amidotransferase
PAMFEDIP_01892	4.07e-249	manA	5.3.1.8	-	G	ko:K01809	ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	mannose-6-phosphate isomerase
PAMFEDIP_01893	3.76e-245	ampC	-	-	V	-	-	-	Beta-lactamase
PAMFEDIP_01894	8.57e-41	-	-	-	-	-	-	-	-
PAMFEDIP_01895	1.9e-260	ilvE	2.6.1.42	-	E	ko:K00826	ko00270,ko00280,ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00270,map00280,map00290,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Branched-chain amino acid aminotransferase
PAMFEDIP_01896	1.33e-77	-	-	-	-	-	-	-	-
PAMFEDIP_01897	1.08e-181	-	-	-	-	-	-	-	-
PAMFEDIP_01898	0.0	yfiC	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter
PAMFEDIP_01899	0.0	ycfI	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter, ATP-binding protein
PAMFEDIP_01900	1.81e-85	yxeA	-	-	S	-	-	-	Protein of unknown function (DUF1093)
PAMFEDIP_01901	2.91e-177	icaB	-	-	G	-	-	-	Polysaccharide deacetylase
PAMFEDIP_01903	7.2e-43	-	-	-	V	-	-	-	Abi-like protein
PAMFEDIP_01904	1.08e-243	-	-	-	-	-	-	-	-
PAMFEDIP_01905	1.85e-208	-	-	-	V	ko:K01990,ko:K16921	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
PAMFEDIP_01906	5.05e-79	-	-	-	K	ko:K07979	-	ko00000,ko03000	helix_turn_helix gluconate operon transcriptional repressor
PAMFEDIP_01907	2.06e-30	-	-	-	-	-	-	-	-
PAMFEDIP_01908	2.14e-117	-	-	-	K	-	-	-	acetyltransferase
PAMFEDIP_01909	1.88e-111	-	-	-	K	-	-	-	GNAT family
PAMFEDIP_01910	8.08e-110	-	-	-	S	-	-	-	ASCH
PAMFEDIP_01911	3.68e-125	-	-	-	K	-	-	-	Cupin domain
PAMFEDIP_01912	8.8e-264	potA	3.6.3.30, 3.6.3.31	-	P	ko:K02010,ko:K11072	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
PAMFEDIP_01913	6.34e-190	potB	-	-	P	ko:K11071	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
PAMFEDIP_01914	1.31e-179	potC	-	-	P	ko:K11070	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
PAMFEDIP_01915	3.07e-264	potD	-	-	P	ko:K11069	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
PAMFEDIP_01916	2.18e-53	-	-	-	-	-	-	-	-
PAMFEDIP_01917	9.59e-288	yumB	1.6.99.3	-	C	ko:K03885	ko00190,map00190	ko00000,ko00001,ko01000	NADH dehydrogenase
PAMFEDIP_01918	1.02e-98	-	-	-	K	-	-	-	Transcriptional regulator
PAMFEDIP_01919	9.81e-33	-	-	-	S	ko:K02348	-	ko00000	GNAT family
PAMFEDIP_01920	3.74e-284	ackA	2.7.2.1	-	F	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PAMFEDIP_01921	3.01e-75	-	-	-	-	-	-	-	-
PAMFEDIP_01922	0.0	uvrB3	3.1.12.1	-	KL	ko:K07464	-	ko00000,ko01000,ko02048	DEAD_2
PAMFEDIP_01923	3.27e-168	-	-	-	-	-	-	-	-
PAMFEDIP_01924	4.29e-227	-	-	-	-	-	-	-	-
PAMFEDIP_01925	4.2e-88	gcsH1	-	-	E	ko:K02437	ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200	ko00000,ko00001,ko00002	Glycine cleavage H-protein
PAMFEDIP_01926	1.37e-92	-	-	-	M	-	-	-	LysM domain protein
PAMFEDIP_01927	3.79e-57	-	3.1.21.3	-	V	ko:K01154	-	ko00000,ko01000,ko02048	Type I restriction modification DNA specificity domain
PAMFEDIP_01928	4.85e-119	XK27_09665	-	-	G	ko:K15640	-	ko00000	Phosphoglycerate mutase family
PAMFEDIP_01929	0.0	-	-	-	M	-	-	-	MucBP domain
PAMFEDIP_01930	5.1e-315	-	-	-	M	-	-	-	MucBP domain
PAMFEDIP_01931	1.42e-08	-	-	-	-	-	-	-	-
PAMFEDIP_01932	1.73e-113	-	-	-	S	-	-	-	AAA domain
PAMFEDIP_01933	7.45e-180	-	-	-	K	-	-	-	sequence-specific DNA binding
PAMFEDIP_01934	2.56e-60	-	-	-	K	-	-	-	Helix-turn-helix domain
PAMFEDIP_01935	7.39e-54	-	-	-	K	-	-	-	Helix-turn-helix domain
PAMFEDIP_01936	3.93e-220	-	-	-	K	-	-	-	Transcriptional regulator
PAMFEDIP_01937	4.37e-120	-	-	-	C	-	-	-	FMN_bind
PAMFEDIP_01938	5.68e-266	-	-	-	C	-	-	-	FMN_bind
PAMFEDIP_01940	4.3e-106	-	-	-	K	-	-	-	Transcriptional regulator
PAMFEDIP_01941	1.64e-149	azoR	-	-	I	ko:K01118	-	ko00000,ko01000	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
PAMFEDIP_01942	0.0	asnS	6.1.1.22	-	J	ko:K01893	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Asparaginyl-tRNA synthetase
PAMFEDIP_01943	3.39e-255	asnA	6.3.1.1	-	F	ko:K01914	ko00250,ko00460,ko01100,ko01110,ko01230,map00250,map00460,map01100,map01110,map01230	ko00000,ko00001,ko01000	aspartate--ammonia ligase
PAMFEDIP_01944	0.0	pepDA	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
PAMFEDIP_01945	1.32e-290	-	-	-	L	-	-	-	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
PAMFEDIP_01946	9.05e-55	-	-	-	-	-	-	-	-
PAMFEDIP_01947	4.95e-44	-	-	-	L	-	-	-	leucine-zipper of insertion element IS481
PAMFEDIP_01948	0.0	recQ	3.6.4.12	-	L	ko:K03654	ko03018,map03018	ko00000,ko00001,ko01000,ko03400	ATP-dependent DNA helicase RecQ
PAMFEDIP_01949	9.95e-211	rluD2	5.4.99.23	-	J	ko:K06180	-	ko00000,ko01000,ko03009	Responsible for synthesis of pseudouridine from uracil
PAMFEDIP_01950	5.06e-68	-	-	-	K	-	-	-	helix_turn_helix, Arsenical Resistance Operon Repressor
PAMFEDIP_01951	2.91e-179	-	-	-	S	-	-	-	NADPH-dependent FMN reductase
PAMFEDIP_01952	2.26e-243	-	-	-	-	-	-	-	-
PAMFEDIP_01953	1.89e-277	yibE	-	-	S	-	-	-	overlaps another CDS with the same product name
PAMFEDIP_01954	4.18e-163	yibF	-	-	S	-	-	-	overlaps another CDS with the same product name
PAMFEDIP_01955	7.84e-117	-	-	-	K	-	-	-	FR47-like protein
PAMFEDIP_01956	1.24e-155	gpm5	-	-	G	-	-	-	Phosphoglycerate mutase family
PAMFEDIP_01957	3.33e-64	-	-	-	-	-	-	-	-
PAMFEDIP_01958	4.24e-246	-	-	-	I	-	-	-	alpha/beta hydrolase fold
PAMFEDIP_01959	0.0	xylP2	-	-	G	-	-	-	symporter
PAMFEDIP_01960	0.0	murE	6.3.2.13	-	M	ko:K01928	ko00300,ko00550,map00300,map00550	ko00000,ko00001,ko01000,ko01011	Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
PAMFEDIP_01961	9.85e-281	dapG	2.7.2.4	-	E	ko:K00928	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Amino acid kinase family
PAMFEDIP_01962	0.0	asnB	6.3.5.4	-	E	ko:K01953	ko00250,ko01100,ko01110,map00250,map01100,map01110	ko00000,ko00001,ko01000,ko01002	Asparagine synthase
PAMFEDIP_01963	3.43e-66	azlD	-	-	S	-	-	-	Branched-chain amino acid transport protein (AzlD)
PAMFEDIP_01964	2.03e-155	azlC	-	-	E	-	-	-	branched-chain amino acid
PAMFEDIP_01965	1.75e-47	-	-	-	K	-	-	-	MerR HTH family regulatory protein
PAMFEDIP_01966	1.46e-170	-	-	-	-	-	-	-	-
PAMFEDIP_01967	2.72e-152	-	-	-	S	-	-	-	Domain of unknown function (DUF4811)
PAMFEDIP_01968	0.0	ycnB	-	-	U	-	-	-	Belongs to the major facilitator superfamily
PAMFEDIP_01969	7.79e-112	-	-	-	K	-	-	-	MerR HTH family regulatory protein
PAMFEDIP_01970	1.36e-77	-	-	-	-	-	-	-	-
PAMFEDIP_01971	2.94e-155	mntR	-	-	K	ko:K03709	-	ko00000,ko03000	iron dependent repressor
PAMFEDIP_01972	1.78e-42	cspC	-	-	K	ko:K03704	-	ko00000,ko03000	Cold shock protein
PAMFEDIP_01973	4.6e-169	-	-	-	S	-	-	-	Putative threonine/serine exporter
PAMFEDIP_01974	7.76e-100	-	-	-	S	-	-	-	Threonine/Serine exporter, ThrE
PAMFEDIP_01975	2.34e-242	brpA	-	-	K	-	-	-	Cell envelope-like function transcriptional attenuator common domain protein
PAMFEDIP_01976	4.15e-153	-	-	-	I	-	-	-	phosphatase
PAMFEDIP_01977	3.88e-198	-	-	-	I	-	-	-	alpha/beta hydrolase fold
PAMFEDIP_01978	3.03e-129	yjcK	2.3.1.128	-	J	ko:K03790	-	ko00000,ko01000,ko03009	Acetyltransferase (GNAT) domain
PAMFEDIP_01979	5.68e-117	-	-	-	K	-	-	-	Transcriptional regulator
PAMFEDIP_01980	0.0	alsS	2.2.1.6	-	EH	ko:K01652	ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the TPP enzyme family
PAMFEDIP_01981	0.0	lysP	-	-	E	ko:K03293,ko:K11733	-	ko00000,ko02000	amino acid
PAMFEDIP_01982	7.48e-153	dacB	3.4.17.14	-	M	ko:K07260	ko00550,ko01100,ko01502,ko02020,map00550,map01100,map01502,map02020	ko00000,ko00001,ko00002,ko01000,ko01002,ko01011,ko01504	D-alanyl-D-alanine carboxypeptidase
PAMFEDIP_01983	1.11e-148	dgk2	-	-	F	-	-	-	deoxynucleoside kinase
PAMFEDIP_01984	1.62e-294	serS	6.1.1.11	-	J	ko:K01875	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
PAMFEDIP_01992	9.78e-102	ctsR	-	-	K	ko:K03708	-	ko00000,ko03000	Belongs to the CtsR family
PAMFEDIP_01993	0.0	clpC	-	-	O	ko:K03696	ko01100,map01100	ko00000,ko03110	Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
PAMFEDIP_01994	1.16e-140	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PAMFEDIP_01995	0.0	rpoB	2.7.7.6	-	K	ko:K03043	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PAMFEDIP_01996	0.0	rpoC	2.7.7.6	-	K	ko:K03046	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PAMFEDIP_01997	1.48e-149	comC	3.4.23.43	-	NOU	ko:K02236	-	ko00000,ko00002,ko01000,ko02044	Bacterial Peptidase A24 N-terminal domain
PAMFEDIP_01998	4.19e-92	rpsL	-	-	J	ko:K02950	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
PAMFEDIP_01999	1.19e-107	rpsG	-	-	J	ko:K02992	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
PAMFEDIP_02000	0.0	fusA	-	-	J	ko:K02355	-	ko00000,ko03012,ko03029	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
PAMFEDIP_02001	4.46e-66	rpsJ	-	-	J	ko:K02946	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Involved in the binding of tRNA to the ribosomes
PAMFEDIP_02002	1.24e-144	rplC	-	-	J	ko:K02906	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
PAMFEDIP_02003	9.83e-141	rplD	-	-	J	ko:K02926	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the polypeptide exit tunnel
PAMFEDIP_02004	2.27e-59	rplW	-	-	J	ko:K02892	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
PAMFEDIP_02005	6.61e-193	rplB	-	-	J	ko:K02886	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
PAMFEDIP_02006	1.85e-62	rpsS	-	-	J	ko:K02965	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
PAMFEDIP_02007	3.59e-69	rplV	-	-	J	ko:K02890	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
PAMFEDIP_02008	5.46e-152	rpsC	-	-	J	ko:K02982	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
PAMFEDIP_02009	8.29e-100	rplP	-	-	J	ko:K02878	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
PAMFEDIP_02010	1.11e-33	rpmC	-	-	J	ko:K02904	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uL29 family
PAMFEDIP_02011	1.96e-54	rpsQ	-	-	J	ko:K02961	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
PAMFEDIP_02012	2.98e-78	rplN	-	-	J	ko:K02874	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
PAMFEDIP_02013	4.1e-67	rplX	-	-	J	ko:K02895	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
PAMFEDIP_02014	3.53e-123	rplE	-	-	J	ko:K02931	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
PAMFEDIP_02015	4.99e-88	rpsH	-	-	J	ko:K02994	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
PAMFEDIP_02016	2.14e-123	rplF	-	-	J	ko:K02933	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
PAMFEDIP_02017	1.75e-75	rplR	-	-	J	ko:K02881	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
PAMFEDIP_02018	5.32e-109	rpsE	-	-	J	ko:K02988	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
PAMFEDIP_02019	8.44e-34	rpmD	-	-	J	ko:K02907	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L30
PAMFEDIP_02020	1.32e-91	rplO	-	-	J	ko:K02876	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to the 23S rRNA
PAMFEDIP_02021	5.95e-300	secY	-	-	U	ko:K03076	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
PAMFEDIP_02022	1.84e-160	adk	2.7.4.3	-	F	ko:K00939	ko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
PAMFEDIP_02023	9.87e-45	infA	-	-	J	ko:K02518	-	ko00000,ko03012	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
PAMFEDIP_02024	9.65e-79	rpsM	-	-	J	ko:K02952	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
PAMFEDIP_02025	7.71e-82	rpsK	-	-	J	ko:K02948	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
PAMFEDIP_02026	2.19e-220	rpoA	2.7.7.6	-	K	ko:K03040	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PAMFEDIP_02027	7.76e-81	rplQ	-	-	J	ko:K02879	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L17
PAMFEDIP_02028	1.02e-233	hepT	2.5.1.30, 2.5.1.83	-	H	ko:K00805,ko:K21275	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	Belongs to the FPP GGPP synthase family
PAMFEDIP_02029	1.41e-122	hepA	2.5.1.30	-	S	ko:K00805	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	Heptaprenyl diphosphate synthase component I
PAMFEDIP_02030	4.42e-111	-	-	-	S	-	-	-	NusG domain II
PAMFEDIP_02031	0.0	ndh	1.6.99.3	-	C	ko:K03885	ko00190,map00190	ko00000,ko00001,ko01000	NADH dehydrogenase
PAMFEDIP_02032	3.19e-194	-	-	-	S	-	-	-	FMN_bind
PAMFEDIP_02033	3.08e-264	apbE	2.7.1.180	-	H	ko:K03734	-	ko00000,ko01000	Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
PAMFEDIP_02034	1.98e-197	ecfA1	-	-	P	ko:K16786	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PAMFEDIP_02035	2.29e-182	ecfT	-	-	U	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PAMFEDIP_02036	3.06e-194	truA	5.4.99.12	-	J	ko:K06173	-	ko00000,ko01000,ko03016	Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
PAMFEDIP_02037	4.58e-103	rplM	-	-	J	ko:K02871	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
PAMFEDIP_02038	8.98e-86	rpsI	-	-	J	ko:K02996	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uS9 family
PAMFEDIP_02039	8.51e-210	yitS	-	-	S	-	-	-	Uncharacterised protein, DegV family COG1307
PAMFEDIP_02040	1.68e-221	-	-	-	S	-	-	-	Membrane
PAMFEDIP_02041	9.14e-38	-	-	-	C	-	-	-	Belongs to the LDH2 MDH2 oxidoreductase family
PAMFEDIP_02042	1.07e-197	-	-	-	C	-	-	-	Belongs to the LDH2 MDH2 oxidoreductase family
PAMFEDIP_02043	0.0	tkt2	2.2.1.1	-	H	ko:K00615	ko00030,ko00710,ko01051,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01051,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
PAMFEDIP_02044	1.65e-211	aroE	1.1.1.25	-	E	ko:K00014	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
PAMFEDIP_02045	3.3e-235	aroF	2.5.1.54	-	E	ko:K03856	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	DAHP synthetase I family
PAMFEDIP_02046	1.33e-255	aroB	4.2.3.4	-	E	ko:K01735	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
PAMFEDIP_02048	1.49e-281	-	-	-	P	ko:K03319	-	ko00000	Sodium:sulfate symporter transmembrane region
PAMFEDIP_02049	1.51e-69	yitW	-	-	S	-	-	-	Iron-sulfur cluster assembly protein
PAMFEDIP_02050	1.41e-147	-	4.2.1.2, 4.2.1.32	-	C	ko:K01676,ko:K03780	ko00020,ko00620,ko00630,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00620,map00630,map00720,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible hydration of fumarate to (S)- malate
PAMFEDIP_02051	4.28e-225	ttdA	4.2.1.32	-	C	ko:K03779	ko00630,map00630	ko00000,ko00001,ko01000	Fumarate hydratase (Fumerase)
PAMFEDIP_02052	6.07e-252	-	-	-	K	-	-	-	Helix-turn-helix domain
PAMFEDIP_02053	3.16e-196	citG	2.4.2.52	-	H	ko:K05966	ko02020,map02020	ko00000,ko00001,ko01000	2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase
PAMFEDIP_02054	2.04e-170	mntB	3.6.3.35	-	P	ko:K02074,ko:K09820,ko:K19973	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter
PAMFEDIP_02055	1.76e-180	mtsB	-	-	U	ko:K19972,ko:K19976	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC 3 transport family
PAMFEDIP_02056	4.26e-222	mntA	-	-	P	ko:K19975,ko:K19976	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the bacterial solute-binding protein 9 family
PAMFEDIP_02057	1.18e-66	-	-	-	-	-	-	-	-
PAMFEDIP_02058	9.2e-215	ldh	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	Belongs to the LDH MDH superfamily. LDH family
PAMFEDIP_02059	0.0	citP	-	-	P	ko:K03319	-	ko00000	Sodium:sulfate symporter transmembrane region
PAMFEDIP_02060	8.69e-230	citR	-	-	K	-	-	-	sugar-binding domain protein
PAMFEDIP_02061	1.11e-263	mae	1.1.1.38	-	C	ko:K00027	ko00620,ko01200,ko02020,map00620,map01200,map02020	ko00000,ko00001,ko01000	Malic enzyme, NAD binding domain
PAMFEDIP_02062	3.07e-241	citC	6.2.1.22	-	H	ko:K01910	ko02020,map02020	ko00000,ko00001,ko01000	Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
PAMFEDIP_02063	1.23e-58	citD	-	-	C	ko:K01646	ko02020,map02020	ko00000,ko00001	Covalent carrier of the coenzyme of citrate lyase
PAMFEDIP_02064	1.51e-206	citE	4.1.3.34	-	G	ko:K01644	ko02020,map02020	ko00000,ko00001,ko01000	Belongs to the HpcH HpaI aldolase family
PAMFEDIP_02065	0.0	citF	2.8.3.10	-	H	ko:K01643	ko02020,map02020	ko00000,ko00001,ko01000	Citrate (pro-3S)-lyase alpha chain
PAMFEDIP_02066	0.0	fumC	4.2.1.2	-	C	ko:K01679	ko00020,ko00620,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko04934,ko05200,ko05211,map00020,map00620,map00720,map01100,map01110,map01120,map01130,map01200,map04934,map05200,map05211	ko00000,ko00001,ko00002,ko01000	Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
PAMFEDIP_02067	0.0	frdA	1.3.5.4	-	C	ko:K00244	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	ko00000,ko00001,ko00002,ko01000	FAD binding domain
PAMFEDIP_02068	2.32e-121	citX	2.7.7.61	-	HI	ko:K05964	ko02020,map02020	ko00000,ko00001,ko01000	Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase
PAMFEDIP_02069	4.54e-207	mleR2	-	-	K	-	-	-	LysR family transcriptional regulator
PAMFEDIP_02070	1.53e-213	mleR	-	-	K	-	-	-	LysR family
PAMFEDIP_02071	0.0	mleS	1.1.1.38, 4.1.1.101	-	C	ko:K00027,ko:K22212	ko00620,ko01120,ko01200,ko02020,map00620,map01120,map01200,map02020	ko00000,ko00001,ko01000	Malic enzyme
PAMFEDIP_02072	2.6e-212	mleP2	-	-	S	ko:K07088	-	ko00000	Sodium Bile acid symporter family
PAMFEDIP_02073	0.0	-	-	-	E	ko:K03294	-	ko00000	Amino Acid
PAMFEDIP_02074	4.37e-128	-	-	-	S	-	-	-	ECF transporter, substrate-specific component
PAMFEDIP_02075	6.07e-33	-	-	-	-	-	-	-	-
PAMFEDIP_02076	0.0	-	-	-	S	ko:K06889	-	ko00000	Alpha beta
PAMFEDIP_02077	0.0	cydA	1.10.3.14	-	C	ko:K00425	ko00190,ko01100,ko02020,map00190,map01100,map02020	ko00000,ko00001,ko00002,ko01000	ubiquinol oxidase
PAMFEDIP_02078	7.76e-234	cydB	1.10.3.14	-	C	ko:K00426	ko00190,ko01100,ko02020,map00190,map01100,map02020	ko00000,ko00001,ko00002,ko01000	Cytochrome d ubiquinol oxidase subunit II
PAMFEDIP_02079	0.0	cydC	-	-	CO	ko:K16013	ko02010,map02010	ko00000,ko00001,ko02000	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
PAMFEDIP_02080	0.0	cydD	-	-	CO	ko:K16012	ko02010,map02010	ko00000,ko00001,ko02000	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
PAMFEDIP_02081	1.89e-208	-	-	-	S	-	-	-	L,D-transpeptidase catalytic domain
PAMFEDIP_02082	4.87e-234	hepT	2.5.1.30	-	H	ko:K00805	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	Belongs to the FPP GGPP synthase family
PAMFEDIP_02083	4.92e-212	menA	2.5.1.74	-	H	ko:K02548	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01006	1,4-dihydroxy-2-naphthoate
PAMFEDIP_02084	0.0	acdH	1.1.1.1, 1.2.1.10, 1.2.1.87	-	C	ko:K04072,ko:K13922	ko00010,ko00071,ko00350,ko00620,ko00625,ko00626,ko00640,ko00650,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00620,map00625,map00626,map00640,map00650,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	Aldehyde dehydrogenase family
PAMFEDIP_02085	8.16e-207	fba	4.1.2.13, 4.1.2.29	-	G	ko:K01624,ko:K03339	ko00010,ko00030,ko00051,ko00562,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00562,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Fructose-1,6-bisphosphate aldolase, class II
PAMFEDIP_02087	2.75e-304	xylP1	-	-	G	-	-	-	MFS/sugar transport protein
PAMFEDIP_02088	5.81e-170	hflC	-	-	O	ko:K04087	-	ko00000,ko00002,ko01000	prohibitin homologues
PAMFEDIP_02089	3.48e-40	-	-	-	-	-	-	-	-
PAMFEDIP_02090	0.0	pepD2	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
PAMFEDIP_02091	6.4e-54	-	-	-	-	-	-	-	-
PAMFEDIP_02092	7.31e-122	bioY	-	-	S	ko:K03523	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	BioY family
PAMFEDIP_02093	6.8e-224	birA	6.3.4.15	-	H	ko:K03524	ko00780,ko01100,map00780,map01100	ko00000,ko00001,ko01000,ko03000	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
PAMFEDIP_02094	3.08e-81	-	-	-	S	-	-	-	CHY zinc finger
PAMFEDIP_02095	3.51e-281	mtnE	-	-	E	ko:K08969	ko00270,ko01100,map00270,map01100	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase
PAMFEDIP_02096	1.57e-280	-	-	-	-	-	-	-	-
PAMFEDIP_02097	1.15e-198	tagG	-	-	U	ko:K09692	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Transport permease protein
PAMFEDIP_02098	9.42e-258	tagH	3.6.3.40	-	GM	ko:K09693	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex TagGH involved in teichoic acids export. Responsible for energy coupling to the transport system
PAMFEDIP_02099	3.93e-59	-	-	-	-	-	-	-	-
PAMFEDIP_02100	4.63e-119	-	-	-	K	-	-	-	Transcriptional regulator PadR-like family
PAMFEDIP_02101	0.0	-	-	-	P	-	-	-	Major Facilitator Superfamily
PAMFEDIP_02102	3.5e-307	amt	-	-	P	ko:K03320	-	ko00000,ko02000	ammonium transporter
PAMFEDIP_02103	2.07e-40	-	-	-	-	-	-	-	-
PAMFEDIP_02104	7.92e-140	-	-	-	S	ko:K07090	-	ko00000	membrane transporter protein
PAMFEDIP_02105	5.93e-73	-	-	-	S	-	-	-	branched-chain amino acid
PAMFEDIP_02106	2.05e-167	-	-	-	E	-	-	-	branched-chain amino acid
PAMFEDIP_02107	1.6e-114	ywnH	2.3.1.183	-	M	ko:K03823	ko00440,ko01130,map00440,map01130	ko00000,ko00001,ko01000	Acetyltransferase (GNAT) domain
PAMFEDIP_02108	3.1e-304	dacA	3.4.16.4	-	M	ko:K07258	ko00550,ko01100,map00550,map01100	ko00000,ko00001,ko01000,ko01002,ko01011	Belongs to the peptidase S11 family
PAMFEDIP_02109	5.61e-273	hpk31	-	-	T	-	-	-	Histidine kinase
PAMFEDIP_02110	1.14e-159	vanR	-	-	K	-	-	-	response regulator
PAMFEDIP_02111	2.4e-161	-	-	-	S	-	-	-	Protein of unknown function (DUF1275)
PAMFEDIP_02112	3.3e-208	prsA	5.2.1.8	-	M	ko:K01802,ko:K07533	-	ko00000,ko01000,ko03110	Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
PAMFEDIP_02113	1.42e-269	guaB	1.1.1.205	-	F	ko:K00088	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
PAMFEDIP_02114	3.49e-160	-	-	-	S	-	-	-	Protein of unknown function (DUF1129)
PAMFEDIP_02115	6.6e-255	ychF	-	-	J	ko:K06942	-	ko00000,ko03009	ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
PAMFEDIP_02116	1.4e-40	yyzM	-	-	S	-	-	-	Bacterial protein of unknown function (DUF951)
PAMFEDIP_02117	7.16e-201	spo0J	-	-	K	ko:K03497	-	ko00000,ko03000,ko03036,ko04812	Belongs to the ParB family
PAMFEDIP_02118	1.01e-175	soj	-	-	D	ko:K03496	-	ko00000,ko03036,ko04812	Sporulation initiation inhibitor
PAMFEDIP_02119	8.63e-191	noc	-	-	K	ko:K03497	-	ko00000,ko03000,ko03036,ko04812	Belongs to the ParB family
PAMFEDIP_02120	1.81e-168	rsmG	2.1.1.170	-	J	ko:K03501	-	ko00000,ko01000,ko03009,ko03036	Specifically methylates the N7 position of a guanine in 16S rRNA
PAMFEDIP_02121	4.76e-288	nupG	-	-	F	ko:K16323	-	ko00000,ko02000	Nucleoside
PAMFEDIP_02123	1.92e-18	mpr	-	-	E	-	-	-	Trypsin-like serine protease
PAMFEDIP_02124	3.53e-38	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
PAMFEDIP_02126	0.0	pacL	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	P-type ATPase
PAMFEDIP_02127	1.32e-57	-	-	-	-	-	-	-	-
PAMFEDIP_02128	1.98e-72	repA	-	-	S	-	-	-	Replication initiator protein A
PAMFEDIP_02129	2.78e-231	-	-	-	U	-	-	-	Relaxase/Mobilisation nuclease domain
PAMFEDIP_02130	9.13e-70	-	-	-	S	-	-	-	Bacterial mobilisation protein (MobC)
PAMFEDIP_02131	3.03e-49	-	-	-	K	-	-	-	sequence-specific DNA binding
PAMFEDIP_02132	2.08e-60	-	-	-	S	-	-	-	Phage derived protein Gp49-like (DUF891)
PAMFEDIP_02133	1.26e-137	-	-	-	L	-	-	-	Integrase
PAMFEDIP_02134	1.11e-59	-	-	-	D	ko:K19159	-	ko00000,ko02048	Antitoxin component of a toxin-antitoxin (TA) module
PAMFEDIP_02135	9.04e-78	-	-	-	S	-	-	-	Bacterial toxin of type II toxin-antitoxin system, YafQ
PAMFEDIP_02136	7.1e-81	-	-	-	S	-	-	-	Protein of unknown function (DUF2992)
PAMFEDIP_02137	1.4e-13	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
PAMFEDIP_02138	6.34e-39	-	-	-	-	-	-	-	-
PAMFEDIP_02139	9.45e-299	mdxE	-	-	G	ko:K02027,ko:K15770,ko:K17237	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding protein
PAMFEDIP_02140	3.74e-302	malC	-	-	P	ko:K15771	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PAMFEDIP_02141	2.83e-206	malD	-	-	P	ko:K15772	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
PAMFEDIP_02142	2.91e-190	malA	-	-	S	-	-	-	maltodextrose utilization protein MalA
PAMFEDIP_02143	0.0	malS	3.2.1.1	GH13	G	ko:K01176	ko00500,ko01100,ko04973,map00500,map01100,map04973	ko00000,ko00001,ko01000	Glycogen debranching enzyme, glucanotransferase domain
PAMFEDIP_02144	2.44e-267	msmX	-	-	P	ko:K10112	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
PAMFEDIP_02145	0.0	mapA	2.4.1.8	GH65	G	ko:K00691	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	hydrolase, family 65, central catalytic
PAMFEDIP_02146	0.0	-	3.2.1.96	-	G	ko:K01227	ko00511,map00511	ko00000,ko00001,ko01000	Glycosyl hydrolase family 85
PAMFEDIP_02147	3.26e-102	hsdR	3.1.21.3	-	V	ko:K01153	-	ko00000,ko01000,ko02048	Subunit R is required for both nuclease and ATPase activities, but not for modification
PAMFEDIP_02148	0.0	pepN	3.4.11.2	-	E	ko:K01256	ko00480,ko01100,map00480,map01100	ko00000,ko00001,ko01000,ko01002	aminopeptidase
PAMFEDIP_02149	2.66e-132	-	-	-	G	-	-	-	Glycogen debranching enzyme
PAMFEDIP_02150	5.6e-14	-	2.7.1.196, 2.7.1.205	-	G	ko:K02759	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIA subunit
PAMFEDIP_02151	6.72e-208	yjdB	-	-	S	-	-	-	Domain of unknown function (DUF4767)
PAMFEDIP_02152	2.02e-192	yisK	3.7.1.5, 4.1.1.68	-	Q	ko:K05921,ko:K16164	ko00350,ko01100,ko01120,ko01220,map00350,map01100,map01120,map01220	ko00000,ko00001,ko00002,ko01000	Fumarylacetoacetate (FAA) hydrolase family
PAMFEDIP_02153	1.04e-94	asp2	-	-	S	-	-	-	Asp23 family, cell envelope-related function
PAMFEDIP_02154	1.1e-93	asp1	-	-	S	-	-	-	Asp23 family, cell envelope-related function
PAMFEDIP_02155	5.74e-32	-	-	-	-	-	-	-	-
PAMFEDIP_02156	1.37e-116	-	-	-	-	-	-	-	-
PAMFEDIP_02157	1.81e-50	ydaS	-	-	S	-	-	-	Transglycosylase associated protein
PAMFEDIP_02158	0.0	XK27_09800	-	-	I	-	-	-	Acyltransferase family
PAMFEDIP_02159	1.71e-59	-	-	-	S	-	-	-	MORN repeat
PAMFEDIP_02160	3.39e-52	-	-	-	S	-	-	-	Cysteine-rich secretory protein family
PAMFEDIP_02161	3.24e-67	-	-	-	-	-	-	-	-
PAMFEDIP_02162	7.28e-213	-	-	-	L	-	-	-	DnaD domain protein
PAMFEDIP_02163	6.45e-80	-	-	-	-	-	-	-	-
PAMFEDIP_02164	8e-70	-	-	-	S	-	-	-	Bacteriophage Mu Gam like protein
PAMFEDIP_02166	2.15e-110	-	-	-	-	-	-	-	-
PAMFEDIP_02167	6.59e-72	-	-	-	-	-	-	-	-
PAMFEDIP_02169	7.19e-51	-	-	-	K	-	-	-	Helix-turn-helix
PAMFEDIP_02170	2.67e-80	-	-	-	K	-	-	-	Helix-turn-helix domain
PAMFEDIP_02171	1.92e-97	-	-	-	E	-	-	-	IrrE N-terminal-like domain
PAMFEDIP_02172	2.69e-38	-	-	-	S	-	-	-	TerB N-terminal domain
PAMFEDIP_02174	4.23e-19	-	-	-	S	ko:K15051	-	ko00000	DNA/RNA non-specific endonuclease
PAMFEDIP_02178	9.38e-279	int3	-	-	L	-	-	-	Belongs to the 'phage' integrase family
PAMFEDIP_02180	1.98e-40	-	-	-	-	-	-	-	-
PAMFEDIP_02182	5.3e-157	-	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase family
PAMFEDIP_02183	4.29e-101	-	-	-	-	-	-	-	-
PAMFEDIP_02184	5.09e-51	-	-	-	S	-	-	-	Bacteriocin-protection, YdeI or OmpD-Associated
PAMFEDIP_02185	2.42e-127	-	-	-	FG	-	-	-	HIT domain
PAMFEDIP_02186	4.27e-223	ydhF	-	-	S	-	-	-	Aldo keto reductase
PAMFEDIP_02187	5.17e-70	-	-	-	S	-	-	-	Pfam:DUF59
PAMFEDIP_02188	4.56e-206	pflA	1.97.1.4	-	C	ko:K04069	-	ko00000,ko01000	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PAMFEDIP_02189	0.0	pflB	2.3.1.54	-	C	ko:K00656	ko00620,ko00640,ko00650,ko01100,ko01120,map00620,map00640,map00650,map01100,map01120	ko00000,ko00001,ko01000	Pyruvate formate lyase-like
PAMFEDIP_02190	1.87e-249	-	-	-	V	-	-	-	Beta-lactamase
PAMFEDIP_02191	3.74e-125	-	-	-	V	-	-	-	VanZ like family
PAMFEDIP_02192	0.0	yhcA	-	-	V	ko:K02003,ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PAMFEDIP_02193	7.89e-124	-	-	-	P	-	-	-	Cadmium resistance transporter
PAMFEDIP_02194	8.58e-65	czrA	-	-	K	ko:K22043	-	ko00000,ko03000	Transcriptional regulator, ArsR family
PAMFEDIP_02195	1.81e-150	-	-	-	S	-	-	-	SNARE associated Golgi protein
PAMFEDIP_02196	7.03e-62	-	-	-	-	-	-	-	-
PAMFEDIP_02197	1.18e-94	usp2	-	-	T	-	-	-	Belongs to the universal stress protein A family
PAMFEDIP_02198	0.0	mntH	-	-	P	ko:K03322	-	ko00000,ko02000	H( )-stimulated, divalent metal cation uptake system
PAMFEDIP_02199	3.35e-157	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
PAMFEDIP_02200	2.88e-106	gtcA3	-	-	S	-	-	-	GtrA-like protein
PAMFEDIP_02201	2.81e-167	zmp3	-	-	O	-	-	-	Zinc-dependent metalloprotease
PAMFEDIP_02202	6.02e-137	-	-	-	S	-	-	-	WxL domain surface cell wall-binding
PAMFEDIP_02203	7.81e-241	-	-	-	S	-	-	-	Cell surface protein
PAMFEDIP_02204	3.15e-98	-	-	-	-	-	-	-	-
PAMFEDIP_02205	0.0	-	-	-	-	-	-	-	-
PAMFEDIP_02206	3.56e-288	hpk9	2.7.13.3	-	T	ko:K07706	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	GHKL domain
PAMFEDIP_02207	2.97e-51	-	-	-	S	ko:K07343	-	ko00000	TfoX C-terminal domain
PAMFEDIP_02208	2.81e-181	-	-	-	K	-	-	-	Helix-turn-helix domain
PAMFEDIP_02209	2.95e-57	-	-	-	S	-	-	-	ankyrin repeats
PAMFEDIP_02210	5.3e-49	-	-	-	-	-	-	-	-
PAMFEDIP_02211	1.96e-189	purR	-	-	F	ko:K09685	-	ko00000,ko03000	pur operon repressor
PAMFEDIP_02212	5.78e-292	glmU	2.3.1.157, 2.7.7.23	-	M	ko:K04042	ko00520,ko01100,ko01130,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
PAMFEDIP_02213	9.06e-193	bla1	3.5.2.6	-	V	ko:K17836	ko00311,ko01130,ko01501,map00311,map01130,map01501	ko00000,ko00001,ko00002,ko01000,ko01504	Beta-lactamase enzyme family
PAMFEDIP_02214	3.26e-228	prs	2.7.6.1	-	F	ko:K00948	ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PAMFEDIP_02215	2.82e-236	-	-	-	S	-	-	-	DUF218 domain
PAMFEDIP_02216	4.31e-179	-	-	-	-	-	-	-	-
PAMFEDIP_02217	7.17e-62	-	-	-	S	-	-	-	Alpha/beta hydrolase of unknown function (DUF915)
PAMFEDIP_02218	2.15e-07	-	-	-	K	-	-	-	transcriptional regulator
PAMFEDIP_02219	5.58e-274	-	-	-	S	-	-	-	membrane
PAMFEDIP_02220	1.51e-105	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PAMFEDIP_02221	0.0	-	-	-	S	-	-	-	Zinc finger, swim domain protein
PAMFEDIP_02222	8.09e-146	-	-	-	GM	-	-	-	epimerase
PAMFEDIP_02223	6.34e-90	-	-	-	S	-	-	-	Protein of unknown function (DUF1722)
PAMFEDIP_02224	2.65e-93	spx2	-	-	P	ko:K16509	-	ko00000	ArsC family
PAMFEDIP_02225	1.4e-137	yjhB	3.6.1.13	-	F	ko:K01515	ko00230,map00230	ko00000,ko00001,ko01000	NUDIX domain
PAMFEDIP_02226	1.68e-176	-	-	-	K	ko:K22103	-	ko00000,ko03000	DeoR C terminal sensor domain
PAMFEDIP_02227	0.0	nox	-	-	P	-	-	-	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
PAMFEDIP_02228	1.3e-264	dapE	3.5.1.18	-	E	ko:K01439	ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000	succinyl-diaminopimelate desuccinylase
PAMFEDIP_02229	4.38e-102	-	-	-	K	-	-	-	Transcriptional regulator
PAMFEDIP_02230	4.6e-307	-	-	-	U	ko:K18926	-	ko00000,ko00002,ko02000	Major Facilitator Superfamily
PAMFEDIP_02231	1.27e-309	eno	4.2.1.11	-	G	ko:K01689	ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066	ko00000,ko00001,ko00002,ko01000,ko03019,ko04147	Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
PAMFEDIP_02232	0.0	-	-	-	P	-	-	-	Cation transporter/ATPase, N-terminus
PAMFEDIP_02233	1.68e-229	-	-	-	C	-	-	-	Zinc-binding dehydrogenase
PAMFEDIP_02234	4.8e-278	-	-	-	I	-	-	-	transferase activity, transferring acyl groups other than amino-acyl groups
PAMFEDIP_02235	1.93e-266	-	-	-	-	-	-	-	-
PAMFEDIP_02236	6.11e-118	yetL	-	-	K	-	-	-	helix_turn_helix multiple antibiotic resistance protein
PAMFEDIP_02237	2.65e-81	-	-	-	P	-	-	-	Rhodanese Homology Domain
PAMFEDIP_02238	0.0	pps	2.7.9.2	-	H	ko:K01007	ko00620,ko00680,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate
PAMFEDIP_02239	2.74e-112	-	-	-	K	-	-	-	helix_turn_helix multiple antibiotic resistance protein
PAMFEDIP_02240	2.08e-213	drrA	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter
PAMFEDIP_02241	2.52e-165	drrB	-	-	U	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 type transporter
PAMFEDIP_02242	1.75e-295	-	-	-	M	-	-	-	O-Antigen ligase
PAMFEDIP_02243	6.85e-164	trmK	2.1.1.217	-	S	ko:K06967	-	ko00000,ko01000,ko03016	SAM-dependent methyltransferase
PAMFEDIP_02244	1.09e-249	yqfO	-	-	S	-	-	-	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
PAMFEDIP_02245	1.29e-298	pepT	3.4.11.4	-	E	ko:K01258	-	ko00000,ko01000,ko01002	Cleaves the N-terminal amino acid of tripeptides
PAMFEDIP_02246	0.0	clpB	-	-	O	ko:K03695	ko04213,map04213	ko00000,ko00001,ko03110	Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
PAMFEDIP_02248	7.03e-40	-	-	-	S	-	-	-	Protein of unknown function (DUF2929)
PAMFEDIP_02249	0.0	dnaE	2.7.7.7	-	L	ko:K02337	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase
PAMFEDIP_02250	8.69e-230	pfkA	2.7.1.11	-	F	ko:K00850	ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04152,ko05230,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04152,map05230	ko00000,ko00001,ko00002,ko01000,ko01009,ko03019	Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
PAMFEDIP_02251	0.0	pyk	2.7.1.40	-	G	ko:K00873	ko00010,ko00230,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko04930,ko05165,ko05203,ko05230,map00010,map00230,map00620,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map04930,map05165,map05203,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Belongs to the pyruvate kinase family
PAMFEDIP_02252	2.51e-98	ytwI	-	-	S	-	-	-	Protein of unknown function (DUF441)
PAMFEDIP_02253	4.59e-217	yitL	-	-	S	ko:K00243	-	ko00000	S1 domain
PAMFEDIP_02254	3.13e-211	xerD	-	-	D	ko:K04763	-	ko00000,ko03036	recombinase XerD
PAMFEDIP_02255	3.99e-92	ribT	-	-	K	ko:K02859	-	ko00000	COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PAMFEDIP_02256	7.1e-176	scpA	-	-	D	ko:K05896	-	ko00000,ko03036	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
PAMFEDIP_02257	1.3e-132	scpB	-	-	D	ko:K06024	-	ko00000,ko03036	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
PAMFEDIP_02258	2.69e-167	rluB	5.4.99.22	-	J	ko:K06178	-	ko00000,ko01000,ko03009	Belongs to the pseudouridine synthase RsuA family
PAMFEDIP_02259	2.24e-126	ribU	-	-	U	-	-	-	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
PAMFEDIP_02260	3.38e-252	-	-	-	S	-	-	-	Helix-turn-helix domain
PAMFEDIP_02261	0.0	recQ	3.6.4.12	-	L	ko:K03654	ko03018,map03018	ko00000,ko00001,ko01000,ko03400	ATP-dependent DNA helicase RecQ
PAMFEDIP_02262	1.25e-39	-	-	-	M	-	-	-	Lysin motif
PAMFEDIP_02263	1.27e-151	cmk	2.7.4.25	-	F	ko:K00945	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the cytidylate kinase family. Type 1 subfamily
PAMFEDIP_02264	1.98e-281	rpsA	-	-	J	ko:K02945	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein S1
PAMFEDIP_02265	5.89e-314	der	-	-	S	ko:K03977	-	ko00000,ko03009	GTPase that plays an essential role in the late steps of ribosome biogenesis
PAMFEDIP_02266	5.57e-55	hup	-	-	L	ko:K03530	-	ko00000,ko03032,ko03036,ko03400	Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
PAMFEDIP_02267	2.08e-284	XK27_05225	-	-	S	-	-	-	Tetratricopeptide repeat protein
PAMFEDIP_02268	1.29e-192	-	3.1.3.102, 3.1.3.104	-	S	ko:K20861	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	hydrolase
PAMFEDIP_02269	1.39e-185	dapB	1.17.1.8	-	E	ko:K00215	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
PAMFEDIP_02270	6.04e-290	cca	2.7.7.72	-	J	ko:K00974	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
PAMFEDIP_02271	6.46e-109	-	-	-	-	-	-	-	-
PAMFEDIP_02272	0.0	yfmR	-	-	S	ko:K15738	-	ko00000,ko02000	ABC transporter, ATP-binding protein
PAMFEDIP_02273	6.7e-241	thyA	2.1.1.45	-	F	ko:K00560	ko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523	ko00000,ko00001,ko00002,ko01000	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
PAMFEDIP_02274	1.8e-119	folA	1.5.1.3	-	H	ko:K00287	ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523	ko00000,ko00001,ko00002,ko01000	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
PAMFEDIP_02275	2.03e-189	WQ51_01275	-	-	S	-	-	-	EDD domain protein, DegV family
PAMFEDIP_02276	1.19e-208	XK27_03630	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase
PAMFEDIP_02277	3.29e-147	ypmS	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2140)
PAMFEDIP_02278	9.33e-48	yozE	-	-	S	-	-	-	Belongs to the UPF0346 family
PAMFEDIP_02279	0.0	ctpA	3.4.21.102	-	M	ko:K03797	-	ko00000,ko01000,ko01002	Belongs to the peptidase S41A family
PAMFEDIP_02280	0.0	qacA	-	-	EGP	-	-	-	Major Facilitator
PAMFEDIP_02281	4.28e-253	XK27_00915	-	-	C	-	-	-	Luciferase-like monooxygenase
PAMFEDIP_02282	3.53e-160	-	1.5.1.40	-	S	ko:K06988	-	ko00000,ko01000	NADP oxidoreductase coenzyme F420-dependent
PAMFEDIP_02283	1.27e-222	-	-	-	L	ko:K07448	-	ko00000,ko02048	restriction endonuclease
PAMFEDIP_02284	1.73e-219	cpsY	-	-	K	-	-	-	Transcriptional regulator, LysR family
PAMFEDIP_02285	5.99e-291	XK27_05470	-	-	E	-	-	-	Methionine synthase
PAMFEDIP_02287	2.25e-207	rbgA	-	-	S	ko:K14540	-	ko00000,ko03009	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
PAMFEDIP_02288	8.64e-177	rnhB	3.1.26.4	-	L	ko:K03470	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PAMFEDIP_02289	2.33e-202	dprA	-	-	LU	ko:K04096	-	ko00000	DNA protecting protein DprA
PAMFEDIP_02290	0.0	topA	5.99.1.2	-	L	ko:K03168	-	ko00000,ko01000,ko03032,ko03400	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
PAMFEDIP_02291	0.0	trmFO	2.1.1.74	-	J	ko:K04094	-	ko00000,ko01000,ko03016,ko03036	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
PAMFEDIP_02292	1.5e-227	xerC	-	-	D	ko:K03733,ko:K04763	-	ko00000,ko03036	Belongs to the 'phage' integrase family. XerC subfamily
PAMFEDIP_02293	6.84e-121	hslV	3.4.25.2	-	O	ko:K01419	-	ko00000,ko01000,ko01002	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
PAMFEDIP_02294	0.0	hslU	-	-	O	ko:K03667	-	ko00000,ko03110	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
PAMFEDIP_02295	3.64e-217	lacX	5.1.3.3	-	G	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Aldose 1-epimerase
PAMFEDIP_02296	2.4e-137	plsY	2.3.1.15	-	I	ko:K08591	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
PAMFEDIP_02297	0.0	parE	-	-	L	ko:K02622	-	ko00000,ko01000,ko02048,ko03032,ko03036	Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PAMFEDIP_02298	0.0	parC	-	-	L	ko:K02621	-	ko00000,ko01000,ko02048,ko03032,ko03036	Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PAMFEDIP_02299	2.21e-227	-	-	-	K	-	-	-	Transcriptional regulator
PAMFEDIP_02300	3.21e-215	ppaC	3.6.1.1	-	C	ko:K15986	ko00190,map00190	ko00000,ko00001,ko01000	inorganic pyrophosphatase
PAMFEDIP_02301	3.8e-105	msrB	1.8.4.12	-	O	ko:K07305	-	ko00000,ko01000	peptide methionine sulfoxide reductase
PAMFEDIP_02302	9.17e-126	msrA	1.8.4.11, 1.8.4.12	-	O	ko:K07304,ko:K12267	-	ko00000,ko01000	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PAMFEDIP_02303	1.07e-43	-	-	-	S	-	-	-	YozE SAM-like fold
PAMFEDIP_02304	3.59e-204	-	-	-	L	-	-	-	Phage integrase, N-terminal SAM-like domain
PAMFEDIP_02305	0.0	-	-	-	M	-	-	-	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
PAMFEDIP_02306	4.49e-315	-	-	-	M	-	-	-	Glycosyl transferase family group 2
PAMFEDIP_02307	3.22e-87	-	-	-	-	-	-	-	-
PAMFEDIP_02308	0.0	gshR1	1.8.1.7	-	C	ko:K00383	ko00480,ko04918,map00480,map04918	ko00000,ko00001,ko01000	Glutathione reductase
PAMFEDIP_02309	1.48e-98	-	-	-	K	-	-	-	helix_turn_helix multiple antibiotic resistance protein
PAMFEDIP_02310	4.87e-123	paiA	2.3.1.57	-	K	ko:K22441	-	ko00000,ko01000	Acetyltransferase (GNAT) domain
PAMFEDIP_02311	0.0	tarL	2.7.8.14, 2.7.8.47	-	H	ko:K18704	-	ko00000,ko01000	CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
PAMFEDIP_02312	1.43e-273	tarK	2.7.8.14, 2.7.8.46, 2.7.8.47	-	H	ko:K18704,ko:K21592	-	ko00000,ko01000	CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
PAMFEDIP_02313	6.51e-247	tarJ	1.1.1.137, 1.1.1.405	-	E	ko:K05352,ko:K21680	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko01000	Catalyzes the NADPH dependent reduction of D-ribulose 5- phosphate to D-ribitol 5-phosphate
PAMFEDIP_02314	2.13e-151	tarI	2.7.7.40, 2.7.7.60	-	I	ko:K00991,ko:K21030	ko00040,ko00900,ko01100,ko01110,ko01130,map00040,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of the cytidylyl group of CTP to D-ribitol 5-phosphate
PAMFEDIP_02315	4.76e-290	-	-	-	-	-	-	-	-
PAMFEDIP_02316	0.0	lctP	-	-	C	ko:K03303	-	ko00000,ko02000	L-lactate permease
PAMFEDIP_02317	7.79e-78	-	-	-	-	-	-	-	-
PAMFEDIP_02318	2.79e-181	-	-	-	-	-	-	-	-
PAMFEDIP_02319	1.06e-312	aapA	-	-	E	ko:K03293,ko:K11737	-	ko00000,ko02000	Amino acid permease
PAMFEDIP_02320	1.05e-176	XK27_00890	-	-	S	ko:K08974	-	ko00000	Domain of unknown function (DUF368)
PAMFEDIP_02321	9.3e-167	yejC	-	-	S	-	-	-	Protein of unknown function (DUF1003)
PAMFEDIP_02322	1.33e-67	XK27_08430	-	-	S	-	-	-	Staphylococcal protein of unknown function (DUF960)
PAMFEDIP_02324	6e-268	pmrB	-	-	EGP	-	-	-	Major Facilitator Superfamily
PAMFEDIP_02325	4.87e-191	-	-	-	C	-	-	-	Domain of unknown function (DUF4931)
PAMFEDIP_02326	2.37e-65	-	-	-	-	-	-	-	-
PAMFEDIP_02327	1.27e-35	-	-	-	-	-	-	-	-
PAMFEDIP_02328	1.96e-168	-	-	-	S	-	-	-	Protein of unknown function (DUF975)
PAMFEDIP_02329	2.47e-101	yjcF	3.5.4.33, 4.4.1.8	-	K	ko:K02348,ko:K11991,ko:K14155	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko01000,ko01007,ko03016	protein acetylation
PAMFEDIP_02330	4.53e-205	-	-	-	S	-	-	-	EDD domain protein, DegV family
PAMFEDIP_02331	1.97e-87	-	-	-	K	-	-	-	Transcriptional regulator
PAMFEDIP_02332	0.0	FbpA	-	-	K	-	-	-	Fibronectin-binding protein
PAMFEDIP_02333	1.6e-171	-	-	-	S	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 family transporter protein
PAMFEDIP_02334	2.16e-208	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PAMFEDIP_02335	1.37e-119	-	-	-	F	-	-	-	NUDIX domain
PAMFEDIP_02336	1.19e-176	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2087)
PAMFEDIP_02337	2.08e-92	-	-	-	S	-	-	-	LuxR family transcriptional regulator
PAMFEDIP_02338	1.92e-168	cat	2.3.1.28	-	V	ko:K19271	-	br01600,ko00000,ko01000,ko01504	Chloramphenicol acetyltransferase
PAMFEDIP_02341	1.9e-93	frataxin	-	-	S	ko:K05937	-	ko00000	Domain of unknown function (DU1801)
PAMFEDIP_02342	3.34e-144	-	-	-	G	-	-	-	Phosphoglycerate mutase family
PAMFEDIP_02343	0.0	carB	6.3.5.5	-	F	ko:K01955	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthase
PAMFEDIP_02344	4.89e-263	carA	6.3.5.5	-	F	ko:K01956	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the CarA family
PAMFEDIP_02345	1.9e-115	pyrR	2.4.2.9	-	F	ko:K02825	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000,ko03000	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
PAMFEDIP_02346	9.72e-225	rluD	5.4.99.23	-	J	ko:K06180	-	ko00000,ko01000,ko03009	Responsible for synthesis of pseudouridine from uracil
PAMFEDIP_02347	1.65e-97	lspA	3.4.23.36	-	MU	ko:K03101	ko03060,map03060	ko00000,ko00001,ko01000,ko01002	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
PAMFEDIP_02348	0.0	fhs	6.3.4.3	-	F	ko:K01938	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Belongs to the formate--tetrahydrofolate ligase family
PAMFEDIP_02349	5.89e-81	esbA	-	-	S	-	-	-	Family of unknown function (DUF5322)
PAMFEDIP_02350	3.28e-87	rnhA	3.1.26.4	-	L	ko:K03469	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Ribonuclease HI
PAMFEDIP_02351	2.44e-267	yurR	1.4.5.1	-	E	ko:K00285	ko00360,map00360	ko00000,ko00001,ko01000	FAD dependent oxidoreductase
PAMFEDIP_02352	2.13e-186	-	-	-	S	-	-	-	hydrolase activity, acting on ester bonds
PAMFEDIP_02353	2.27e-247	-	-	-	-	-	-	-	-
PAMFEDIP_02354	1.9e-156	-	-	-	P	ko:K01990	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
PAMFEDIP_02355	4.35e-159	-	-	-	-	ko:K01992	-	ko00000,ko00002,ko02000	-
PAMFEDIP_02356	1.38e-232	-	-	-	V	-	-	-	LD-carboxypeptidase
PAMFEDIP_02357	1.23e-311	-	-	-	M	ko:K07273	-	ko00000	hydrolase, family 25
PAMFEDIP_02358	4.27e-146	glnP9	-	-	P	ko:K02029	-	ko00000,ko00002,ko02000	ABC transporter, permease protein
PAMFEDIP_02359	3.23e-150	glnP7	-	-	P	ko:K02029	-	ko00000,ko00002,ko02000	ABC transporter permease
PAMFEDIP_02360	1.39e-173	glnQ	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
PAMFEDIP_02361	4.31e-196	cjaA	-	-	ET	ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter substrate-binding protein
PAMFEDIP_02362	4.49e-74	-	-	-	L	-	-	-	Transposase DDE domain
PAMFEDIP_02363	3.2e-76	-	-	-	T	ko:K07171	-	ko00000,ko01000,ko02048	PemK-like, MazF-like toxin of type II toxin-antitoxin system
PAMFEDIP_02364	3.16e-59	-	-	-	T	ko:K07172	-	ko00000,ko02048	Antidote-toxin recognition MazE, bacterial antitoxin
PAMFEDIP_02365	9.24e-140	-	-	-	L	-	-	-	Integrase
PAMFEDIP_02366	3.72e-21	-	-	-	-	-	-	-	-
PAMFEDIP_02367	5.13e-119	-	-	-	S	-	-	-	ECF-type riboflavin transporter, S component
PAMFEDIP_02368	7.59e-64	-	-	-	-	-	-	-	-
PAMFEDIP_02369	6.83e-274	yceI	-	-	EGP	ko:K08369	-	ko00000,ko02000	Major Facilitator
PAMFEDIP_02370	8.05e-178	-	-	-	F	-	-	-	NUDIX domain
PAMFEDIP_02371	2.68e-32	-	-	-	-	-	-	-	-
PAMFEDIP_02373	8.51e-209	-	-	-	S	-	-	-	Alpha/beta hydrolase of unknown function (DUF915)
PAMFEDIP_02374	1.23e-222	ykfC	3.4.14.13	-	M	ko:K20742	-	ko00000,ko01000,ko01002	NlpC/P60 family
PAMFEDIP_02375	3.43e-106	-	-	-	K	ko:K03719	-	ko00000,ko03000,ko03036	AsnC family
PAMFEDIP_02376	2.29e-48	-	-	-	-	-	-	-	-
PAMFEDIP_02377	4.54e-45	-	-	-	-	-	-	-	-
PAMFEDIP_02378	9.39e-277	-	-	-	T	-	-	-	diguanylate cyclase
PAMFEDIP_02379	2.51e-200	glcU	-	-	U	ko:K05340	-	ko00000,ko02000	sugar transport
PAMFEDIP_02380	5.23e-277	ywbD	2.1.1.191	-	J	ko:K06969	-	ko00000,ko01000,ko03009	S-adenosylmethionine-dependent methyltransferase
PAMFEDIP_02381	0.0	yclK	-	-	T	-	-	-	Histidine kinase
PAMFEDIP_02382	1.45e-173	yclJ	-	-	K	ko:K02483	-	ko00000,ko02022	response regulator
PAMFEDIP_02383	2.12e-308	XK27_08635	-	-	S	ko:K09157	-	ko00000	UPF0210 protein
PAMFEDIP_02384	1.06e-51	XK27_08630	-	-	T	ko:K07166	-	ko00000	Belongs to the UPF0237 family
PAMFEDIP_02385	2.55e-218	-	-	-	EG	-	-	-	EamA-like transporter family
PAMFEDIP_02387	1.5e-56	-	-	-	S	-	-	-	Protein of unknown function (DUF1093)
PAMFEDIP_02388	2.69e-190	uppP	3.6.1.27	-	V	ko:K06153	ko00550,map00550	ko00000,ko00001,ko01000,ko01011	Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
PAMFEDIP_02389	5.94e-118	ymdB	-	-	S	-	-	-	Macro domain protein
PAMFEDIP_02390	6.47e-124	-	-	-	K	ko:K22041	-	ko00000,ko03000	transcriptional regulator
PAMFEDIP_02391	1.58e-66	-	-	-	-	-	-	-	-
PAMFEDIP_02392	2.41e-212	-	-	-	S	-	-	-	Protein of unknown function (DUF1002)
PAMFEDIP_02393	0.0	-	-	-	-	-	-	-	-
PAMFEDIP_02394	2.08e-161	-	-	-	S	-	-	-	Bacterial protein of unknown function (DUF916)
PAMFEDIP_02395	6.66e-115	-	-	-	-	-	-	-	-
PAMFEDIP_02396	2.29e-225	-	-	-	L	-	-	-	Initiator Replication protein
PAMFEDIP_02397	3.67e-41	-	-	-	-	-	-	-	-
PAMFEDIP_02398	1.87e-139	-	-	-	L	-	-	-	Integrase
PAMFEDIP_02399	4.17e-55	-	-	-	K	-	-	-	prlF antitoxin for toxin YhaV_toxin
PAMFEDIP_02400	1.03e-77	-	-	-	T	ko:K07171	-	ko00000,ko01000,ko02048	PemK-like, MazF-like toxin of type II toxin-antitoxin system
PAMFEDIP_02401	0.0	ybfG	-	-	M	-	-	-	peptidoglycan-binding domain-containing protein
PAMFEDIP_02403	0.0	-	3.6.3.44	-	P	ko:K18104	ko01501,ko02010,map01501,map02010	ko00000,ko00001,ko00002,ko01000,ko01504,ko02000	ABC transporter transmembrane region
PAMFEDIP_02404	2.62e-76	-	2.4.1.52	GT4	M	ko:K00712	-	ko00000,ko01000,ko01003	Glycosyl transferases group 1
PAMFEDIP_02405	1.89e-254	-	2.4.1.52	GT4	M	ko:K00712	-	ko00000,ko01000,ko01003	Glycosyl transferases group 1
PAMFEDIP_02406	0.0	-	-	-	V	ko:K02003,ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PAMFEDIP_02407	2.1e-33	-	-	-	-	-	-	-	-
PAMFEDIP_02408	0.0	pgi	5.3.1.9	-	G	ko:K01810	ko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the GPI family
PAMFEDIP_02409	5.07e-155	traI	5.99.1.2	-	L	ko:K03169	-	ko00000,ko01000,ko03032	This gene contains a nucleotide ambiguity which may be the result of a sequencing error
PAMFEDIP_02410	1.39e-36	-	-	-	-	-	-	-	-
PAMFEDIP_02411	4.93e-54	-	-	-	-	-	-	-	-
PAMFEDIP_02412	6.52e-52	-	-	-	S	-	-	-	protein conserved in bacteria
PAMFEDIP_02413	1.95e-25	-	-	-	-	-	-	-	-
PAMFEDIP_02414	3.1e-172	repA	-	-	S	-	-	-	Replication initiator protein A
PAMFEDIP_02415	0.0	cycA	-	-	E	ko:K03293,ko:K11737	-	ko00000,ko02000	Amino acid permease
PAMFEDIP_02416	2.83e-58	-	-	-	L	ko:K07473	-	ko00000,ko02048	Addiction module antitoxin, RelB DinJ family
PAMFEDIP_02417	6.45e-111	-	-	-	-	-	-	-	-
PAMFEDIP_02418	8.5e-55	-	-	-	-	-	-	-	-
PAMFEDIP_02419	1.34e-34	-	-	-	-	-	-	-	-
PAMFEDIP_02420	0.0	traA	-	-	L	-	-	-	MobA MobL family protein
PAMFEDIP_02421	2.09e-151	-	-	-	-	-	-	-	-
PAMFEDIP_02422	1.16e-84	-	-	-	-	-	-	-	-
PAMFEDIP_02423	0.0	traI	5.99.1.2	-	L	ko:K03169	-	ko00000,ko01000,ko03032	This gene contains a nucleotide ambiguity which may be the result of a sequencing error
PAMFEDIP_02424	6.39e-169	znuB	-	-	U	ko:K02075,ko:K09816	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC 3 transport family
PAMFEDIP_02425	8.05e-166	adcC	-	-	P	ko:K02074,ko:K09817,ko:K11710	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter
PAMFEDIP_02426	1.9e-230	-	-	-	S	ko:K06889	-	ko00000	Prolyl oligopeptidase family
PAMFEDIP_02427	2.26e-209	ispE	2.7.1.148	-	F	ko:K00919,ko:K16924	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko02000	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
PAMFEDIP_02428	6.87e-50	veg	-	-	S	-	-	-	Biofilm formation stimulator VEG
PAMFEDIP_02429	1.19e-201	ksgA	2.1.1.182	-	J	ko:K02528	-	ko00000,ko01000,ko03009	Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
PAMFEDIP_02430	1.6e-127	rnmV	3.1.26.8	-	J	ko:K05985	-	ko00000,ko01000	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
PAMFEDIP_02431	1.63e-187	tatD	-	-	L	ko:K03424	-	ko00000,ko01000	hydrolase, TatD family
PAMFEDIP_02433	6.87e-204	-	-	-	S	-	-	-	Cysteine-rich secretory protein family
PAMFEDIP_02434	6.16e-298	yceJ	-	-	EGP	ko:K08221	-	ko00000,ko02000	transporter
PAMFEDIP_02435	4.73e-206	-	-	-	L	ko:K07497	-	ko00000	hmm pf00665
PAMFEDIP_02436	2.13e-167	-	-	-	L	-	-	-	Helix-turn-helix domain
PAMFEDIP_02437	1.07e-74	-	-	-	K	-	-	-	HxlR-like helix-turn-helix
PAMFEDIP_02438	9.51e-142	XK27_07075	-	-	V	ko:K07052	-	ko00000	CAAX protease self-immunity
PAMFEDIP_02439	1.01e-293	pyrP	-	-	F	ko:K02824	-	ko00000,ko02000	Permease
PAMFEDIP_02440	4.82e-165	atpB	-	-	C	ko:K02108	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko03110	it plays a direct role in the translocation of protons across the membrane
PAMFEDIP_02441	1.81e-37	atpE	-	-	C	ko:K02110	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PAMFEDIP_02442	5.41e-77	atpF	-	-	C	ko:K02109	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
PAMFEDIP_02443	2.03e-118	atpH	-	-	C	ko:K02113	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PAMFEDIP_02444	0.0	atpA	3.6.3.14	-	C	ko:K02111	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko01000	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
PAMFEDIP_02445	9.14e-213	atpG	-	-	C	ko:K02115	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
PAMFEDIP_02446	0.0	atpD	3.6.3.14	-	C	ko:K02112	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko01000	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
PAMFEDIP_02447	5.95e-74	atpC	-	-	C	ko:K02114	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Produces ATP from ADP in the presence of a proton gradient across the membrane
PAMFEDIP_02448	4.85e-314	murA	2.5.1.7	-	M	ko:K00790	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PAMFEDIP_02449	1.68e-132	-	-	-	J	ko:K03817	-	ko00000,ko01000,ko03009	Acetyltransferase (GNAT) domain
PAMFEDIP_02450	1.44e-230	mbl	-	-	D	ko:K03569	-	ko00000,ko02048,ko03036,ko04812	Cell shape determining protein MreB Mrl
PAMFEDIP_02451	1.52e-57	ytjA	-	-	S	ko:K08998	-	ko00000	Could be involved in insertion of integral membrane proteins into the membrane
PAMFEDIP_02452	1.04e-45	-	-	-	S	-	-	-	Protein of unknown function (DUF2969)
PAMFEDIP_02453	2.15e-280	rodA	-	-	D	ko:K05837	-	ko00000,ko03036	Belongs to the SEDS family
PAMFEDIP_02454	3.2e-64	gcsH2	-	-	E	ko:K02437	ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200	ko00000,ko00001,ko00002	glycine cleavage
PAMFEDIP_02455	2.24e-239	metN	-	-	P	ko:K02071	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
PAMFEDIP_02456	2.1e-151	metI	-	-	U	ko:K02069,ko:K02072	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
PAMFEDIP_02457	8.69e-191	metQ	-	-	M	ko:K02072,ko:K02073	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the nlpA lipoprotein family
PAMFEDIP_02458	3.34e-215	hicD3	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	Belongs to the LDH MDH superfamily
PAMFEDIP_02459	3.26e-227	-	-	-	S	-	-	-	Protein of unknown function (DUF2785)
PAMFEDIP_02460	7.55e-242	-	1.1.1.1, 1.6.5.5	-	C	ko:K00001,ko:K00344	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily
PAMFEDIP_02461	6.54e-273	ddl	6.3.2.4	-	F	ko:K01921	ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Belongs to the D-alanine--D-alanine ligase family
PAMFEDIP_02462	0.0	glpQ3	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	Glycerophosphoryl diester phosphodiesterase family
PAMFEDIP_02463	4.7e-207	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
PAMFEDIP_02464	1.1e-258	bla2	3.5.2.6	-	V	ko:K17836	ko00311,ko01130,ko01501,map00311,map01130,map01501	ko00000,ko00001,ko00002,ko01000,ko01504	Beta-lactamase enzyme family
PAMFEDIP_02465	2.37e-107	uspA	-	-	T	-	-	-	universal stress protein
PAMFEDIP_02466	1.34e-52	-	-	-	-	-	-	-	-
PAMFEDIP_02467	7.27e-303	rarA	-	-	L	ko:K07478	-	ko00000	recombination factor protein RarA
PAMFEDIP_02468	0.0	gshAB	6.3.2.2	-	H	ko:K01919	ko00270,ko00480,ko01100,map00270,map00480,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the glutamate--cysteine ligase type 1 family
PAMFEDIP_02469	9.17e-59	-	-	-	K	-	-	-	helix_turn_helix, Arsenical Resistance Operon Repressor
PAMFEDIP_02470	1.24e-139	-	-	-	S	-	-	-	Protein of unknown function (DUF1648)
PAMFEDIP_02471	1.63e-104	XK27_05190	-	-	S	-	-	-	Protein of unknown function (DUF1694)
PAMFEDIP_02472	4.02e-145	yktB	-	-	S	-	-	-	Belongs to the UPF0637 family
PAMFEDIP_02473	2.15e-137	rpsD	-	-	J	ko:K02986	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
PAMFEDIP_02474	7.5e-105	yebR	1.8.4.14	-	T	ko:K08968	ko00270,map00270	ko00000,ko00001,ko01000	GAF domain-containing protein
PAMFEDIP_02475	0.0	ezrA	-	-	D	ko:K06286	-	ko00000,ko03036	modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
PAMFEDIP_02476	2.59e-277	iscS2	2.8.1.7	-	E	ko:K04487	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko02048,ko03016,ko03029	Aminotransferase class V
PAMFEDIP_02477	8.93e-291	thiI	2.8.1.4	-	H	ko:K03151	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko03016	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
PAMFEDIP_02478	1.57e-299	gshF	6.3.2.2	-	H	ko:K01919,ko:K16786,ko:K16787	ko00270,ko00480,ko01100,ko02010,map00270,map00480,map01100,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Belongs to the glutamate--cysteine ligase type 1 family
PAMFEDIP_02479	3.56e-116	tpx	1.11.1.15	-	O	ko:K11065	-	ko00000,ko01000	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
PAMFEDIP_02480	0.0	valS	6.1.1.9	-	J	ko:K01873	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
PAMFEDIP_02481	5.62e-316	folC	6.3.2.12, 6.3.2.17	-	H	ko:K11754	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the folylpolyglutamate synthase family
PAMFEDIP_02482	1.15e-150	radC	-	-	L	ko:K03630	-	ko00000	DNA repair protein
PAMFEDIP_02483	1.74e-211	mreB	-	-	D	ko:K03569	-	ko00000,ko02048,ko03036,ko04812	cell shape determining protein MreB
PAMFEDIP_02484	3.76e-184	mreC	-	-	M	ko:K03570	-	ko00000,ko03036	Involved in formation and maintenance of cell shape
PAMFEDIP_02485	9.47e-115	mreD	-	-	M	ko:K03571	-	ko00000,ko03036	rod shape-determining protein MreD
PAMFEDIP_02486	3.81e-150	minC	-	-	D	ko:K03610	-	ko00000,ko03036,ko04812	Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization
PAMFEDIP_02487	1.23e-187	minD	-	-	D	ko:K03609	-	ko00000,ko03036,ko04812	Belongs to the ParA family
PAMFEDIP_02488	1.89e-141	yecS_2	-	-	P	ko:K02029,ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter permease
PAMFEDIP_02489	3.17e-149	glnQ	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
PAMFEDIP_02490	2.61e-199	aatB	-	-	ET	ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter substrate-binding protein
PAMFEDIP_02491	0.0	lysC	2.7.2.4	-	E	ko:K00928	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the aspartokinase family
PAMFEDIP_02492	3.55e-296	ymfF	-	-	S	-	-	-	Peptidase M16 inactive domain protein
PAMFEDIP_02493	0.0	ymfH	-	-	S	-	-	-	Peptidase M16
PAMFEDIP_02494	5.74e-172	ymfM	-	-	S	ko:K15539	-	ko00000	Helix-turn-helix domain
PAMFEDIP_02495	1.92e-127	pgsA	2.7.8.5	-	I	ko:K00995	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
PAMFEDIP_02496	3.83e-295	cinA	3.5.1.42	-	S	ko:K03742,ko:K03743	ko00760,map00760	ko00000,ko00001,ko01000	Belongs to the CinA family
PAMFEDIP_02497	2.43e-264	recA	-	-	L	ko:K03553	ko03440,map03440	ko00000,ko00001,ko00002,ko03400	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
PAMFEDIP_02498	6.57e-291	rny	-	-	S	ko:K18682	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	Endoribonuclease that initiates mRNA decay
PAMFEDIP_02499	6.18e-197	ymdB	-	-	S	ko:K02029,ko:K02030,ko:K09769	-	ko00000,ko00002,ko02000	YmdB-like protein
PAMFEDIP_02500	0.0	mutS	-	-	L	ko:K03555	ko03430,map03430	ko00000,ko00001,ko03400	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
PAMFEDIP_02501	0.0	mutL	-	-	L	ko:K03572	ko03430,map03430	ko00000,ko00001,ko03400	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
PAMFEDIP_02502	0.0	-	-	-	L	ko:K07487	-	ko00000	Transposase
PAMFEDIP_02503	1.3e-91	-	-	-	-	-	-	-	-
PAMFEDIP_02504	0.0	yfhO	-	-	S	-	-	-	Bacterial membrane protein YfhO
PAMFEDIP_02505	4.02e-114	-	-	-	-	-	-	-	-
PAMFEDIP_02506	2.83e-138	ruvA	3.6.4.12	-	L	ko:K03550	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
PAMFEDIP_02507	2.62e-239	ruvB	3.6.4.12	-	L	ko:K03551	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
PAMFEDIP_02508	5.87e-256	queA	2.4.99.17	-	J	ko:K07568	-	ko00000,ko01000,ko03016	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
PAMFEDIP_02509	9.91e-289	tgt	2.4.2.29	-	F	ko:K00773	-	ko00000,ko01000,ko03016	Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
PAMFEDIP_02510	1.32e-63	yajC	-	-	U	ko:K03210	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Preprotein translocase
PAMFEDIP_02511	2.48e-276	dinB	2.7.7.7	-	L	ko:K02346	-	ko00000,ko01000,ko03400	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
PAMFEDIP_02512	8.32e-227	nrnA	3.1.13.3, 3.1.3.7	-	S	ko:K06881	ko00920,ko01100,ko01120,map00920,map01100,map01120	ko00000,ko00001,ko01000,ko03400	DHHA1 domain protein
PAMFEDIP_02513	2.79e-316	cshB	3.6.4.13	-	JKL	ko:K05592,ko:K18692	ko03018,map03018	ko00000,ko00001,ko01000,ko03009,ko03019	DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
PAMFEDIP_02514	0.0	alaS	6.1.1.7	-	J	ko:K01872	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
PAMFEDIP_02515	5e-57	yrzL	-	-	S	-	-	-	Belongs to the UPF0297 family
PAMFEDIP_02516	5.39e-96	yrrK	-	-	J	ko:K07447	-	ko00000,ko01000	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
PAMFEDIP_02517	1.31e-63	yrzB	-	-	S	-	-	-	Belongs to the UPF0473 family
PAMFEDIP_02518	1.06e-49	-	-	-	D	ko:K09888	-	ko00000,ko03036	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
PAMFEDIP_02519	0.0	mutS2	-	-	L	ko:K07456	ko03430,map03430	ko00000,ko00001,ko03400	Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
PAMFEDIP_02520	3e-69	trxA	-	-	O	ko:K03671	ko04621,ko05418,map04621,map05418	ko00000,ko00001,ko03110	Belongs to the thioredoxin family
PAMFEDIP_02521	1.45e-161	yslB	-	-	S	-	-	-	Protein of unknown function (DUF2507)
PAMFEDIP_02522	5.06e-194	murI	3.6.1.66, 5.1.1.3	-	M	ko:K01776,ko:K02428	ko00230,ko00471,ko01100,map00230,map00471,map01100	ko00000,ko00001,ko01000,ko01011	Provides the (R)-glutamate required for cell wall biosynthesis
PAMFEDIP_02523	8.49e-144	rdgB	3.6.1.66	-	F	ko:K02428	ko00230,map00230	ko00000,ko00001,ko01000	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
PAMFEDIP_02524	4.03e-125	ysnB	-	-	S	ko:K07095	-	ko00000	Phosphoesterase
PAMFEDIP_02525	7.94e-114	ykuL	-	-	S	-	-	-	(CBS) domain
PAMFEDIP_02526	2.29e-112	dapH	2.3.1.117, 2.3.1.89	-	E	ko:K00674,ko:K05822	ko00300,ko01100,ko01110,ko01120,ko01230,map00300,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
PAMFEDIP_02527	6.72e-289	hipO	3.5.1.47	-	E	ko:K05823	ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000,ko01002	Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
PAMFEDIP_02528	2.31e-202	ykuT	-	-	M	ko:K16052,ko:K22044	-	ko00000,ko02000	mechanosensitive ion channel
PAMFEDIP_02529	1.88e-75	ytxG	-	-	S	-	-	-	protein containing a divergent version of the methyl-accepting chemotaxis-like domain
PAMFEDIP_02530	1.6e-96	-	-	-	-	-	-	-	-
PAMFEDIP_02531	9.86e-82	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
PAMFEDIP_02532	7.36e-274	pepQ	3.4.13.9	-	E	ko:K01271	-	ko00000,ko01000,ko01002	Creatinase/Prolidase N-terminal domain
PAMFEDIP_02533	5.44e-232	ccpA	-	-	K	ko:K02529	-	ko00000,ko03000	catabolite control protein A
PAMFEDIP_02534	3.21e-210	-	-	-	G	-	-	-	Xylose isomerase domain protein TIM barrel
PAMFEDIP_02535	2.44e-65	-	-	-	S	ko:K09004	-	ko00000	DsrE/DsrF-like family
PAMFEDIP_02536	2.21e-168	yebC	-	-	K	-	-	-	Transcriptional regulatory protein
PAMFEDIP_02537	2.06e-205	rbsK	2.7.1.15	-	H	ko:K00852	ko00030,map00030	ko00000,ko00001,ko01000	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PAMFEDIP_02538	2.57e-224	comGA	-	-	NU	ko:K02243	-	ko00000,ko00002,ko02044	Type II IV secretion system protein
PAMFEDIP_02539	6.2e-242	comGB	-	-	NU	ko:K02244	-	ko00000,ko00002,ko02044	type II secretion system
PAMFEDIP_02540	1.97e-72	comGC	-	-	U	ko:K02245	-	ko00000,ko00002,ko02044	competence protein ComGC
PAMFEDIP_02541	1.5e-108	-	-	-	NU	ko:K02246	-	ko00000,ko00002,ko02044	general secretion pathway protein
PAMFEDIP_02542	3.03e-27	-	-	-	-	ko:K02671	-	ko00000,ko02035,ko02044	-
PAMFEDIP_02543	6.46e-113	-	-	-	S	-	-	-	Prokaryotic N-terminal methylation motif
PAMFEDIP_02545	3.68e-235	ytxK	2.1.1.72	-	L	ko:K00571	-	ko00000,ko01000,ko02048	N-6 DNA Methylase
PAMFEDIP_02546	4.7e-282	ackA	2.7.2.1	-	F	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PAMFEDIP_02547	0.0	cycA	-	-	E	ko:K03293,ko:K11737	-	ko00000,ko02000	Amino acid permease
PAMFEDIP_02548	5.77e-151	-	-	-	S	-	-	-	Calcineurin-like phosphoesterase
PAMFEDIP_02549	0.0	yunD	3.1.3.5	-	F	ko:K01081	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the 5'-nucleotidase family
PAMFEDIP_02550	1.96e-116	yutD	-	-	S	-	-	-	Protein of unknown function (DUF1027)
PAMFEDIP_02551	7.18e-189	nagD	3.1.3.41	-	G	ko:K01101	ko00627,ko01120,map00627,map01120	ko00000,ko00001,ko01000	Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
PAMFEDIP_02552	2.71e-150	-	-	-	S	-	-	-	Protein of unknown function (DUF1461)
PAMFEDIP_02553	8.38e-152	dedA	-	-	S	ko:K03975	-	ko00000	SNARE-like domain protein
PAMFEDIP_02554	5.16e-141	ppiB	5.2.1.8	-	G	ko:K03768	-	ko00000,ko01000,ko03110	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
PAMFEDIP_02555	2e-98	yugI	-	-	J	ko:K07570,ko:K07571	-	ko00000	general stress protein
PAMFEDIP_02556	0.0	hsdR	3.1.21.3	-	V	ko:K01153	-	ko00000,ko01000,ko02048	Subunit R is required for both nuclease and ATPase activities, but not for modification
PAMFEDIP_02557	2.92e-118	hsdM	2.1.1.72	-	V	ko:K03427	-	ko00000,ko01000,ko02048	type I restriction-modification system
PAMFEDIP_02558	9.16e-190	hsdM	2.1.1.72	-	V	ko:K03427	-	ko00000,ko01000,ko02048	type I restriction-modification system
PAMFEDIP_02559	5.09e-81	-	-	-	V	-	-	-	Type I restriction modification DNA specificity domain
PAMFEDIP_02560	4.61e-222	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
PAMFEDIP_02561	1.66e-96	-	-	-	-	-	-	-	-
PAMFEDIP_02562	6.67e-30	-	-	-	L	ko:K07497	-	ko00000	hmm pf00665
PAMFEDIP_02563	8.56e-38	-	-	-	L	ko:K07497	-	ko00000	hmm pf00665
PAMFEDIP_02564	9.16e-61	-	-	-	L	-	-	-	Helix-turn-helix domain
PAMFEDIP_02566	3.56e-171	spoVK	-	-	O	ko:K06413	-	ko00000	ATPase family associated with various cellular activities (AAA)
PAMFEDIP_02567	3.99e-101	malL	3.2.1.10, 3.2.1.20	GH13,GH31	G	ko:K01182,ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Alpha amylase, catalytic domain protein
PAMFEDIP_02568	2.17e-304	-	-	-	P	ko:K03319	-	ko00000	Sodium:sulfate symporter transmembrane region
PAMFEDIP_02569	0.0	-	-	-	C	-	-	-	FMN_bind
PAMFEDIP_02570	3.55e-169	-	-	-	K	-	-	-	LysR family
PAMFEDIP_02571	1.61e-74	mleR	-	-	K	-	-	-	LysR substrate binding domain
PAMFEDIP_02572	2.1e-116	-	-	-	T	-	-	-	ECF transporter, substrate-specific component
PAMFEDIP_02573	1.06e-16	-	-	-	-	-	-	-	-
PAMFEDIP_02574	1.96e-21	ytgB	-	-	S	-	-	-	Transglycosylase associated protein
PAMFEDIP_02575	0.0	katA	1.11.1.6	-	C	ko:K03781	ko00380,ko00630,ko01110,ko01130,ko01200,ko04011,ko04016,ko04068,ko04146,ko04211,ko04212,ko04213,ko05014,map00380,map00630,map01110,map01130,map01200,map04011,map04016,map04068,map04146,map04211,map04212,map04213,map05014	ko00000,ko00001,ko00002,ko01000	Belongs to the catalase family
PAMFEDIP_02576	1.32e-101	nrp	-	-	K	ko:K16509	-	ko00000	ArsC family
PAMFEDIP_02577	7.42e-174	-	-	-	K	ko:K07707	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko02022	LytTr DNA-binding domain
PAMFEDIP_02578	2.91e-171	blpH	2.7.13.3	-	T	ko:K07706	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	GHKL domain
PAMFEDIP_02580	0.0	adhE	1.1.1.1, 1.2.1.10	-	C	ko:K04072	ko00010,ko00071,ko00350,ko00620,ko00625,ko00626,ko00650,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00620,map00625,map00626,map00650,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	belongs to the iron- containing alcohol dehydrogenase family
PAMFEDIP_02581	2.51e-103	-	-	-	T	-	-	-	Universal stress protein family
PAMFEDIP_02582	7.43e-130	padR	-	-	K	-	-	-	Virulence activator alpha C-term
PAMFEDIP_02583	3.71e-36	padC	-	-	Q	ko:K13727	-	ko00000,ko01000	Phenolic acid decarboxylase
PAMFEDIP_02584	7.39e-83	-	-	-	G	-	-	-	COG0662 Mannose-6-phosphate isomerase
PAMFEDIP_02585	2.85e-57	-	-	-	-	-	-	-	-
PAMFEDIP_02586	2.06e-66	ykoF	-	-	S	-	-	-	YKOF-related Family
PAMFEDIP_02587	5.63e-15	-	-	-	E	-	-	-	glutamine synthetase
PAMFEDIP_02588	9.73e-245	-	-	-	E	-	-	-	glutamine synthetase
PAMFEDIP_02589	1.19e-124	-	-	-	L	-	-	-	Resolvase, N terminal domain
PAMFEDIP_02590	7.8e-75	usp2	-	-	T	-	-	-	Belongs to the universal stress protein A family
PAMFEDIP_02591	9.57e-315	mntH	-	-	P	ko:K03322	-	ko00000,ko02000	H( )-stimulated, divalent metal cation uptake system
PAMFEDIP_02592	3.35e-49	-	-	-	K	ko:K03709	-	ko00000,ko03000	Helix-turn-helix diphteria tox regulatory element
PAMFEDIP_02594	1.48e-81	ackA	2.7.2.1	-	F	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PAMFEDIP_02595	5.32e-298	aspD	4.1.1.12	-	E	ko:K09758	ko00250,ko00270,ko01100,ko01230,map00250,map00270,map01100,map01230	ko00000,ko00001,ko01000	Aminotransferase class I and II
PAMFEDIP_02596	9.33e-249	-	-	-	U	ko:K07085	-	ko00000	Predicted Permease Membrane Region
PAMFEDIP_02597	6.47e-10	-	-	-	P	-	-	-	Cation efflux family
PAMFEDIP_02598	8.86e-35	-	-	-	-	-	-	-	-
PAMFEDIP_02599	0.0	sufI	-	-	Q	-	-	-	Multicopper oxidase
PAMFEDIP_02600	2.44e-303	-	-	-	EGP	-	-	-	Major Facilitator Superfamily
PAMFEDIP_02601	1.89e-71	-	-	-	-	-	-	-	-
PAMFEDIP_02602	4.16e-06	-	-	-	S	-	-	-	Transposase C of IS166 homeodomain
PAMFEDIP_02603	5.03e-75	XK27_01125	-	-	L	ko:K07484	-	ko00000	PFAM IS66 Orf2 family protein
PAMFEDIP_02604	3.9e-34	-	-	-	-	-	-	-	-
PAMFEDIP_02605	2.89e-256	pbuX	-	-	F	ko:K03458,ko:K16169	-	ko00000,ko02000	xanthine permease
PAMFEDIP_02606	1.05e-66	-	-	-	L	-	-	-	Transposase IS66 family
PAMFEDIP_02607	1.7e-143	-	3.1.3.18	-	S	ko:K01091	ko00630,ko01100,ko01110,ko01130,map00630,map01100,map01110,map01130	ko00000,ko00001,ko01000	haloacid dehalogenase-like hydrolase
PAMFEDIP_02608	2.31e-132	thgA3	2.3.1.18, 2.3.1.79	-	S	ko:K00633,ko:K00661	-	ko00000,ko01000	Maltose O-acetyltransferase
PAMFEDIP_02609	2.49e-167	-	-	-	K	-	-	-	Helix-turn-helix domain, rpiR family
PAMFEDIP_02610	8.81e-205	-	-	-	S	-	-	-	Alpha beta hydrolase
PAMFEDIP_02611	1.39e-143	-	-	-	GM	-	-	-	NmrA-like family
PAMFEDIP_02612	1.74e-101	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2255)
PAMFEDIP_02613	5.72e-207	-	-	-	K	-	-	-	Transcriptional regulator
PAMFEDIP_02614	3.78e-221	cryZ	1.1.1.1	-	C	ko:K00001	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	nadph quinone reductase
PAMFEDIP_02616	0.0	nox4	-	-	C	-	-	-	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
PAMFEDIP_02617	1.51e-132	desR	-	-	K	ko:K02479,ko:K07693	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	helix_turn_helix, Lux Regulon
PAMFEDIP_02618	5.11e-266	desK	2.7.13.3	-	T	ko:K07778	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
PAMFEDIP_02619	1.27e-174	XK27_09830	-	-	V	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 type transporter
PAMFEDIP_02620	4.17e-204	yvfR	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter
PAMFEDIP_02622	6.64e-109	-	-	-	K	ko:K03827	-	ko00000,ko01000	Acetyltransferase (GNAT) domain
PAMFEDIP_02623	2.25e-93	-	-	-	K	-	-	-	MarR family
PAMFEDIP_02624	1.49e-147	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
PAMFEDIP_02625	0.000138	yjdF	-	-	S	-	-	-	Protein of unknown function (DUF2992)
PAMFEDIP_02626	1.03e-206	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PAMFEDIP_02627	6.05e-170	-	-	-	S	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 family transporter protein
PAMFEDIP_02628	1.43e-251	-	-	-	-	-	-	-	-
PAMFEDIP_02629	5.23e-256	-	-	-	-	-	-	-	-
PAMFEDIP_02630	4.94e-213	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PAMFEDIP_02631	1.18e-85	ytrA	-	-	K	ko:K07979	-	ko00000,ko03000	helix_turn_helix gluconate operon transcriptional repressor
PAMFEDIP_02632	1.74e-251	sigA	-	-	K	ko:K03086	-	ko00000,ko03021	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
PAMFEDIP_02633	0.0	dnaG	-	-	L	ko:K02316	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
PAMFEDIP_02634	0.0	glyS	6.1.1.14	-	J	ko:K01879	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Glycyl-tRNA synthetase beta subunit
PAMFEDIP_02635	8.64e-224	glyQ	6.1.1.14	-	J	ko:K01878	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	glycyl-tRNA synthetase alpha subunit
PAMFEDIP_02636	2.84e-189	recO	-	-	L	ko:K03584	ko03440,map03440	ko00000,ko00001,ko03400	Involved in DNA repair and RecF pathway recombination
PAMFEDIP_02637	7.92e-217	era	-	-	S	ko:K03595	-	ko00000,ko03009,ko03029	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
PAMFEDIP_02638	1.15e-94	dgkA	2.7.1.107, 2.7.1.66	-	M	ko:K00887,ko:K00901	ko00550,ko00561,ko00564,ko01100,ko01110,ko04070,ko04072,ko05231,map00550,map00561,map00564,map01100,map01110,map04070,map04072,map05231	ko00000,ko00001,ko01000	Diacylglycerol kinase
PAMFEDIP_02639	3.14e-109	ybeY	-	-	S	ko:K07042	-	ko00000,ko03009	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
PAMFEDIP_02640	4.81e-229	phoH	-	-	T	ko:K06217	-	ko00000	phosphate starvation-inducible protein PhoH
PAMFEDIP_02641	9.21e-94	yqeY	-	-	S	ko:K09117	-	ko00000	YqeY-like protein
PAMFEDIP_02642	1.09e-30	rpsU	-	-	J	ko:K02970	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bS21 family
PAMFEDIP_02643	2.32e-194	yqfL	2.7.11.33, 2.7.4.28	-	F	ko:K09773	-	ko00000,ko01000	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
PAMFEDIP_02644	1.78e-140	-	-	-	C	-	-	-	Enoyl-(Acyl carrier protein) reductase
PAMFEDIP_02645	1.42e-217	nfo	3.1.21.2	-	L	ko:K01151	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
PAMFEDIP_02646	1.84e-284	tagB	2.7.8.44	-	M	ko:K21285	-	ko00000,ko01000	CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
PAMFEDIP_02647	4.35e-204	yitT	-	-	S	-	-	-	Uncharacterised 5xTM membrane BCR, YitT family COG1284
PAMFEDIP_02648	2.61e-132	msrA	1.8.4.11, 1.8.4.12	-	O	ko:K07304,ko:K12267	-	ko00000,ko01000	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PAMFEDIP_02649	0.0	aspS	6.1.1.12	-	J	ko:K01876	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
PAMFEDIP_02650	2.47e-310	hisS	6.1.1.21	-	J	ko:K01892	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	histidyl-tRNA synthetase
PAMFEDIP_02651	4.01e-200	lytH	3.5.1.28	-	M	ko:K01448	ko01503,map01503	ko00000,ko00001,ko00002,ko01000,ko01011,ko03036	N-acetylmuramoyl-L-alanine amidase
PAMFEDIP_02652	2.29e-207	-	-	-	G	-	-	-	Fructosamine kinase
PAMFEDIP_02653	2.43e-150	yjcF	-	-	J	-	-	-	HAD-hyrolase-like
PAMFEDIP_02654	8.2e-102	dtd	-	-	J	ko:K07560	-	ko00000,ko01000,ko03016	rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
PAMFEDIP_02655	0.0	relA	2.7.6.5	-	KT	ko:K00951	ko00230,map00230	ko00000,ko00001,ko01000	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
PAMFEDIP_02656	2.56e-76	-	-	-	-	-	-	-	-
PAMFEDIP_02657	3.13e-172	rsmE	2.1.1.193	-	J	ko:K09761	-	ko00000,ko01000,ko03009	Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
PAMFEDIP_02658	2.04e-226	prmA	-	-	J	ko:K02687	-	ko00000,ko01000,ko03009	Ribosomal protein L11 methyltransferase
PAMFEDIP_02659	5.28e-146	yxlJ	3.2.2.21	-	L	ko:K03652	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Belongs to the DNA glycosylase MPG family
PAMFEDIP_02660	4.78e-65	-	-	-	-	-	-	-	-
PAMFEDIP_02661	1.73e-67	-	-	-	-	-	-	-	-
PAMFEDIP_02664	1.01e-158	int7	-	-	L	-	-	-	Belongs to the 'phage' integrase family
PAMFEDIP_02665	0.0	lepA	-	-	M	ko:K03596	ko05134,map05134	ko00000,ko00001	Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
PAMFEDIP_02666	1.68e-312	dltD	-	-	M	ko:K03740	ko01503,ko02020,ko05150,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01504	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
PAMFEDIP_02667	5.75e-47	dltC	6.1.1.13	-	J	ko:K14188	ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01000,ko01504	Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PAMFEDIP_02668	3.27e-297	dltB	-	-	M	ko:K03739	ko01503,ko02020,ko05150,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01504	MBOAT, membrane-bound O-acyltransferase family
PAMFEDIP_02669	0.0	dltA	6.1.1.13	-	H	ko:K03367	ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01000,ko01504	Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PAMFEDIP_02670	8.59e-27	dltX	-	-	S	-	-	-	D-Ala-teichoic acid biosynthesis protein
PAMFEDIP_02671	8.49e-266	pbpX2	-	-	V	-	-	-	Beta-lactamase
PAMFEDIP_02672	2.54e-266	dnaJ	-	-	O	ko:K03686	-	ko00000,ko03029,ko03110	ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
PAMFEDIP_02673	0.0	dnaK	-	-	O	ko:K04043	ko03018,ko04212,ko05152,map03018,map04212,map05152	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	Heat shock 70 kDa protein
PAMFEDIP_02674	4.52e-111	grpE	-	-	O	ko:K03687	-	ko00000,ko03029,ko03110	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
PAMFEDIP_02675	4.42e-248	hrcA	-	-	K	ko:K03705	-	ko00000,ko03000	Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
PAMFEDIP_02676	1.19e-169	budA	4.1.1.5	-	Q	ko:K01575	ko00650,ko00660,map00650,map00660	ko00000,ko00001,ko01000	Alpha-acetolactate decarboxylase
PAMFEDIP_02677	2.53e-240	ribF	2.7.1.26, 2.7.7.2	-	H	ko:K11753	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Belongs to the ribF family
PAMFEDIP_02678	8.94e-221	truB	5.4.99.25	-	J	ko:K03177,ko:K03483	-	ko00000,ko01000,ko03000,ko03016	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
PAMFEDIP_02679	2.41e-113	aroK	2.7.1.71	-	F	ko:K00891	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
PAMFEDIP_02680	1.21e-245	tyrA	1.3.1.12	-	E	ko:K04517	ko00400,ko00401,ko01100,ko01110,ko01130,ko01230,map00400,map00401,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	prephenate dehydrogenase
PAMFEDIP_02681	1.19e-285	aroA	2.5.1.19	-	E	ko:K00800	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
PAMFEDIP_02682	1.63e-121	-	-	-	-	-	-	-	-
PAMFEDIP_02683	3.67e-275	aroC	4.2.3.5	-	E	ko:K01736	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
PAMFEDIP_02684	0.0	-	-	-	G	-	-	-	Major Facilitator
PAMFEDIP_02685	3.04e-71	rbfA	-	-	J	ko:K02834	-	ko00000,ko03009	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
PAMFEDIP_02686	0.0	infB	-	-	J	ko:K02519	-	ko00000,ko03012,ko03029	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
PAMFEDIP_02687	3.28e-63	ylxQ	-	-	J	-	-	-	ribosomal protein
PAMFEDIP_02688	2.95e-65	ylxR	-	-	K	ko:K07742	-	ko00000	Protein of unknown function (DUF448)
PAMFEDIP_02689	4.46e-275	nusA	-	-	K	ko:K02600	-	ko00000,ko03009,ko03021	Participates in both transcription termination and antitermination
PAMFEDIP_02690	9.74e-108	rimP	-	-	J	ko:K09748	-	ko00000,ko03009	Required for maturation of 30S ribosomal subunits
PAMFEDIP_02691	0.0	polC	2.7.7.7	-	L	ko:K03763	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PAMFEDIP_02692	4.64e-294	rseP	-	-	M	ko:K11749	ko02024,ko04112,map02024,map04112	ko00000,ko00001,ko01000,ko01002	zinc metalloprotease
PAMFEDIP_02693	1.13e-175	cdsA	2.7.7.41	-	I	ko:K00981	ko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070	ko00000,ko00001,ko00002,ko01000	Belongs to the CDS family
PAMFEDIP_02694	3.17e-190	uppS	2.5.1.31	-	H	ko:K00806	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
PAMFEDIP_02695	9.83e-113	frr	-	-	J	ko:K02838	-	ko00000,ko03012	Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
PAMFEDIP_02696	3.01e-165	pyrH	2.7.4.22	-	F	ko:K09903	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphorylation of UMP to UDP
PAMFEDIP_02697	1.88e-194	tsf	-	-	J	ko:K02357	-	ko00000,ko03012,ko03029	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
PAMFEDIP_02698	6.33e-185	rpsB	-	-	J	ko:K02967	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uS2 family
PAMFEDIP_02699	2.92e-172	-	-	-	S	ko:K07025	-	ko00000	Haloacid dehalogenase-like hydrolase
PAMFEDIP_02700	1.92e-239	ldhD	1.1.1.28	-	CH	ko:K03778	ko00620,ko01120,map00620,map01120	ko00000,ko00001,ko01000	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PAMFEDIP_02701	5.67e-64	yazA	-	-	L	ko:K07461	-	ko00000	GIY-YIG catalytic domain protein
PAMFEDIP_02702	2.11e-171	yabB	2.1.1.223	-	L	ko:K07461,ko:K15460	-	ko00000,ko01000,ko03016	Methyltransferase small domain
PAMFEDIP_02703	8.8e-155	plsC	2.3.1.51	-	I	ko:K00655	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Acyltransferase
PAMFEDIP_02704	3.96e-44	XK26_06720	-	-	S	ko:K09976	-	ko00000	Uncharacterised protein family (UPF0154)
PAMFEDIP_02705	7.68e-48	ynzC	-	-	S	-	-	-	UPF0291 protein
PAMFEDIP_02706	7.22e-149	lexA	3.4.21.88	-	K	ko:K01356	-	ko00000,ko00002,ko01000,ko01002,ko03400	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
PAMFEDIP_02707	7.8e-123	-	-	-	-	-	-	-	-
PAMFEDIP_02708	1.56e-276	mvaS	2.3.3.10	-	I	ko:K01641	ko00072,ko00280,ko00650,ko00900,ko01100,ko01110,ko01130,map00072,map00280,map00650,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Hydroxymethylglutaryl-CoA synthase
PAMFEDIP_02709	1.38e-98	-	-	-	-	-	-	-	-
PAMFEDIP_02710	3.81e-87	-	-	-	-	-	-	-	-
PAMFEDIP_02711	1.14e-226	csbB	-	GT2	M	ko:K20534	-	ko00000,ko01000,ko01005,ko02000	Glycosyltransferase like family 2
PAMFEDIP_02712	2.19e-131	-	-	-	L	-	-	-	Helix-turn-helix domain
PAMFEDIP_02713	4.46e-281	ywtF_2	-	-	K	-	-	-	Cell envelope-related transcriptional attenuator domain
PAMFEDIP_02714	3.82e-184	-	-	-	P	ko:K02049	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
PAMFEDIP_02715	0.0	-	-	-	P	ko:K02050	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PAMFEDIP_02716	1.96e-293	rodA	-	-	D	ko:K05837	-	ko00000,ko03036	Cell cycle protein
PAMFEDIP_02718	8.69e-185	-	-	-	D	-	-	-	AAA domain
PAMFEDIP_02719	4.87e-45	-	-	-	-	-	-	-	-
PAMFEDIP_02722	1.74e-72	-	-	-	K	-	-	-	helix_turn_helix multiple antibiotic resistance protein
PAMFEDIP_02723	0.0	kup	-	-	P	ko:K03549	-	ko00000,ko02000	Transport of potassium into the cell
PAMFEDIP_02724	5.62e-49	kdpE	-	-	KT	ko:K02483,ko:K07667	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko02022	Transcriptional regulatory protein, C terminal
PAMFEDIP_02725	2.71e-234	yumC	1.18.1.2, 1.19.1.1	-	C	ko:K21567	-	ko00000,ko01000	Ferredoxin--NADP reductase
PAMFEDIP_02726	2.14e-183	-	-	-	S	-	-	-	Alpha/beta hydrolase of unknown function (DUF915)
PAMFEDIP_02731	3.54e-18	-	-	-	S	-	-	-	YopX protein
PAMFEDIP_02733	9.03e-83	-	-	-	L	-	-	-	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC
PAMFEDIP_02734	7.57e-122	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PAMFEDIP_02735	3.47e-244	-	1.1.1.219	-	GM	ko:K00091	-	ko00000,ko01000	Male sterility protein
PAMFEDIP_02736	1.27e-129	-	-	-	S	-	-	-	Protein of unknown function (DUF1211)
PAMFEDIP_02737	1.35e-55	-	-	-	S	-	-	-	COG NOG38524 non supervised orthologous group
PAMFEDIP_02738	3.79e-26	-	-	-	-	-	-	-	-
PAMFEDIP_02739	2.64e-233	-	-	-	L	-	-	-	Psort location Cytoplasmic, score
PAMFEDIP_02740	5.41e-89	-	-	-	C	-	-	-	lyase activity
PAMFEDIP_02742	9.4e-122	-	-	-	L	-	-	-	4.5 Transposon and IS
PAMFEDIP_02743	1.15e-52	-	-	-	L	ko:K07483	-	ko00000	Transposase
PAMFEDIP_02745	5.43e-167	-	-	-	S	-	-	-	Phage Mu protein F like protein
PAMFEDIP_02746	3.62e-22	ytgB	-	-	S	-	-	-	Transglycosylase associated protein
PAMFEDIP_02747	0.0	ydiF	-	-	S	ko:K06158	-	ko00000,ko03012	ABC transporter, ATP-binding protein
PAMFEDIP_02748	3.67e-154	rex	-	-	K	ko:K01926	-	ko00000,ko03000	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
PAMFEDIP_02749	2.38e-140	ydiL	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
PAMFEDIP_02750	9.82e-55	groS	-	-	O	ko:K04078	-	ko00000,ko03029,ko03110	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
PAMFEDIP_02751	0.0	groL	-	-	O	ko:K04077	ko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
PAMFEDIP_02752	0.0	ydaO	-	-	E	-	-	-	amino acid
PAMFEDIP_02753	7.29e-247	tagO	2.7.8.33, 2.7.8.35	-	M	ko:K02851	-	ko00000,ko01000,ko01003,ko01005	transferase
PAMFEDIP_02754	6.57e-199	pstS	-	-	P	ko:K02040	ko02010,ko02020,ko05152,map02010,map02020,map05152	ko00000,ko00001,ko00002,ko02000	Phosphate
PAMFEDIP_02755	3.7e-149	yvyE	3.4.13.9	-	S	ko:K01271	-	ko00000,ko01000,ko01002	YigZ family
PAMFEDIP_02756	0.0	comFA	-	-	L	ko:K02240	-	ko00000,ko00002,ko02044	Helicase C-terminal domain protein
PAMFEDIP_02757	2.94e-164	comFC	-	-	S	ko:K02242	-	ko00000,ko00002,ko02044	Competence protein
PAMFEDIP_02758	1.27e-129	hpf	-	-	J	ko:K05808	-	ko00000,ko03009	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
PAMFEDIP_02759	0.0	secA	-	-	U	ko:K03070	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
PAMFEDIP_02760	3.41e-257	prfB	-	-	J	ko:K02836	-	ko00000,ko03012	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
PAMFEDIP_02761	1.05e-275	minJ	-	-	O	-	-	-	Domain present in PSD-95, Dlg, and ZO-1/2.
PAMFEDIP_02762	1.49e-170	phoP	-	-	K	ko:K07658	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	response regulator
PAMFEDIP_02763	0.0	phoR	2.7.13.3	-	T	ko:K07636	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
PAMFEDIP_02764	2.31e-199	pstS	-	-	P	ko:K02040	ko02010,ko02020,ko05152,map02010,map02020,map05152	ko00000,ko00001,ko00002,ko02000	Phosphate
PAMFEDIP_02765	9.05e-206	pstC	-	-	P	ko:K02037	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	probably responsible for the translocation of the substrate across the membrane
PAMFEDIP_02766	5.04e-200	pstA	-	-	P	ko:K02038	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Phosphate transport system permease protein PstA
PAMFEDIP_02767	9.78e-190	pstB2	3.6.3.27	-	P	ko:K02036	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PAMFEDIP_02768	4.47e-177	pstB1	3.6.3.27	-	P	ko:K02036	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PAMFEDIP_02769	1.55e-150	phoU	-	-	P	ko:K02039	-	ko00000	Plays a role in the regulation of phosphate uptake
PAMFEDIP_02770	2.78e-65	pspC	-	-	KT	ko:K03973	-	ko00000,ko02048,ko03000	positive regulation of macromolecule biosynthetic process
PAMFEDIP_02771	2.87e-71	yvlD	-	-	S	ko:K08972	-	ko00000	Mycobacterial 4 TMS phage holin, superfamily IV
PAMFEDIP_02772	2.55e-225	hprK	-	-	F	ko:K06023	-	ko00000,ko01000	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
PAMFEDIP_02773	6.26e-213	lgt	-	-	M	ko:K13292	-	ko00000,ko01000	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
PAMFEDIP_02774	4e-235	gpsA	1.1.1.94	-	I	ko:K00057	ko00564,ko01110,map00564,map01110	ko00000,ko00001,ko01000	Glycerol-3-phosphate dehydrogenase
PAMFEDIP_02775	1.13e-218	galU	2.7.7.9	-	M	ko:K00963	ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	UTP-glucose-1-phosphate uridylyltransferase
PAMFEDIP_02776	6.37e-160	-	-	-	T	-	-	-	Putative diguanylate phosphodiesterase
PAMFEDIP_02777	0.0	nox	-	-	C	-	-	-	NADH oxidase
PAMFEDIP_02778	8.65e-226	trxB	1.8.1.9	-	C	ko:K00384	ko00450,map00450	ko00000,ko00001,ko01000	Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
PAMFEDIP_02779	4.31e-141	yviA	-	-	S	-	-	-	Protein of unknown function (DUF421)
PAMFEDIP_02780	7.54e-99	-	-	-	S	-	-	-	Protein of unknown function (DUF3290)
PAMFEDIP_02781	0.0	pgm	5.4.2.2	-	G	ko:K01835	ko00010,ko00030,ko00052,ko00230,ko00500,ko00520,ko00521,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00052,map00230,map00500,map00520,map00521,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
PAMFEDIP_02782	5.9e-170	-	-	-	T	-	-	-	Putative diguanylate phosphodiesterase
PAMFEDIP_02783	0.0	nox2	-	-	S	-	-	-	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
PAMFEDIP_02784	1.89e-134	aad	3.4.13.22	-	E	ko:K08641	ko01502,ko02020,map01502,map02020	ko00000,ko00001,ko00002,ko01000,ko01002,ko01011,ko01504	Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
PAMFEDIP_02785	5.33e-268	blt	-	-	EGP	ko:K08153	-	ko00000,ko00002,ko02000	transporter
PAMFEDIP_02786	3.85e-151	yfbR	-	-	S	ko:K07023	-	ko00000	HD containing hydrolase-like enzyme
PAMFEDIP_02787	0.0	uvrB	-	-	L	ko:K03702	ko03420,map03420	ko00000,ko00001,ko03400	damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
PAMFEDIP_02788	0.0	uvrA	-	-	L	ko:K03701	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
PAMFEDIP_02789	2.21e-113	luxS	4.4.1.21	-	H	ko:K07173	ko00270,ko01100,ko01230,ko02024,ko02026,ko05111,map00270,map01100,map01230,map02024,map02026,map05111	ko00000,ko00001,ko00002,ko01000	Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
PAMFEDIP_02790	7.5e-302	argG	6.3.4.5	-	E	ko:K01940	ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,ko05418,map00220,map00250,map01100,map01110,map01130,map01230,map05418	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the argininosuccinate synthase family. Type 1 subfamily
PAMFEDIP_02791	0.0	argH	4.3.2.1	-	E	ko:K01755	ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,map00220,map00250,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	argininosuccinate lyase
PAMFEDIP_02792	3.51e-113	-	-	-	S	-	-	-	Short repeat of unknown function (DUF308)
PAMFEDIP_02793	1.71e-207	yvcJ	-	-	S	ko:K06958	-	ko00000,ko03019	Displays ATPase and GTPase activities
PAMFEDIP_02794	5.32e-242	yvcK	-	-	S	-	-	-	Required for morphogenesis under gluconeogenic growth conditions
PAMFEDIP_02795	1.21e-215	whiA	-	-	K	ko:K09762	-	ko00000	May be required for sporulation
PAMFEDIP_02796	0.0	oppA	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
PAMFEDIP_02797	8.58e-223	-	1.1.1.26	-	CH	ko:K00015	ko00630,ko01100,ko01110,ko01120,map00630,map01100,map01110,map01120	ko00000,ko00001,ko01000	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PAMFEDIP_02798	5.11e-133	clpP	3.4.21.92	-	O	ko:K01358	ko04112,ko04212,map04112,map04212	ko00000,ko00001,ko01000,ko01002	Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
PAMFEDIP_02800	1.14e-311	rpoN	-	-	K	ko:K03092	ko02020,ko05111,map02020,map05111	ko00000,ko00001,ko03021	Sigma-54 factor, core binding domain
PAMFEDIP_02801	5.75e-242	cggR	-	-	K	ko:K05311	-	ko00000,ko03000	Putative sugar-binding domain
PAMFEDIP_02802	2.02e-245	gap	1.2.1.12	-	G	ko:K00134	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
PAMFEDIP_02803	1.31e-285	pgk	2.7.2.3	-	F	ko:K00927	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the phosphoglycerate kinase family
PAMFEDIP_02804	7.15e-179	tpiA	5.3.1.1	-	G	ko:K01803	ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
PAMFEDIP_02805	0.0	eno	4.2.1.11	-	G	ko:K01689	ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066	ko00000,ko00001,ko00002,ko01000,ko03019,ko04147	Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
PAMFEDIP_02806	2.83e-168	-	-	-	-	-	-	-	-
PAMFEDIP_02807	0.0	eriC	-	-	P	ko:K03281	-	ko00000	chloride
PAMFEDIP_02808	3.55e-43	secG	-	-	U	ko:K03075	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Preprotein translocase
PAMFEDIP_02809	3.83e-179	est	3.1.1.1	-	S	ko:K03928	-	ko00000,ko01000	Serine aminopeptidase, S33
PAMFEDIP_02810	0.0	rnr	-	-	J	ko:K12573	ko03018,map03018	ko00000,ko00001,ko01000,ko03016,ko03019	3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
PAMFEDIP_02811	2.4e-107	smpB	-	-	J	ko:K03664	-	ko00000	the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
PAMFEDIP_02812	0.0	-	-	-	M	-	-	-	Domain of unknown function (DUF5011)
PAMFEDIP_02813	0.0	glnP	-	-	P	ko:K02029,ko:K02030,ko:K10036	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
PAMFEDIP_02814	9.36e-171	glnQ	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
PAMFEDIP_02815	7.98e-137	-	-	-	-	-	-	-	-
PAMFEDIP_02816	1.98e-199	ycsE	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
PAMFEDIP_02817	1.4e-174	ung	3.2.2.27	-	L	ko:K03648	ko03410,ko05340,map03410,map05340	ko00000,ko00001,ko01000,ko03400	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
PAMFEDIP_02818	1.23e-227	pta	2.3.1.8, 3.6.3.21	-	C	ko:K00625,ko:K02028	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000,ko02000	phosphate acetyltransferase
PAMFEDIP_02819	1.29e-105	ydiB	-	-	O	ko:K06925	-	ko00000,ko03016	Hydrolase, P-loop family
PAMFEDIP_02820	2.52e-114	-	-	-	J	-	-	-	Acetyltransferase (GNAT) domain
PAMFEDIP_02821	2.41e-129	dnaQ	2.7.7.7	-	L	ko:K02342	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III
PAMFEDIP_02822	2.53e-198	exoA	3.1.11.2	-	L	ko:K01142	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	exodeoxyribonuclease III
PAMFEDIP_02823	3.09e-213	ysjB	-	-	S	ko:K03810	-	ko00000	Oxidoreductase family, NAD-binding Rossmann fold
PAMFEDIP_02824	6.24e-214	murB	1.3.1.98	-	M	ko:K00075	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation
PAMFEDIP_02825	0.0	yvgP	-	-	P	ko:K03316	-	ko00000	Sodium proton antiporter
PAMFEDIP_02826	3.07e-119	-	-	-	K	-	-	-	helix_turn_helix multiple antibiotic resistance protein
PAMFEDIP_02827	8.06e-156	-	-	-	S	-	-	-	Protein of unknown function (DUF1361)
PAMFEDIP_02828	2.39e-191	dacA	2.7.7.85	-	S	ko:K18672	-	ko00000,ko01000	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
PAMFEDIP_02829	2.18e-182	ybbR	-	-	S	-	-	-	YbbR-like protein
PAMFEDIP_02830	0.0	glmM	5.4.2.10	-	G	ko:K03431	ko00520,ko01100,ko01130,map00520,map01100,map01130	ko00000,ko00001,ko01000	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
PAMFEDIP_02831	0.0	glmS	2.6.1.16	-	M	ko:K00820	ko00250,ko00520,ko01100,ko01130,ko04931,map00250,map00520,map01100,map01130,map04931	ko00000,ko00001,ko01000,ko01002	Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
PAMFEDIP_02833	6.13e-127	soj	-	-	D	-	-	-	CobQ CobB MinD ParA nucleotide binding domain protein
PAMFEDIP_02834	1.08e-71	-	-	-	-	-	-	-	-
PAMFEDIP_02835	1.37e-83	-	-	-	K	-	-	-	Helix-turn-helix domain
PAMFEDIP_02836	2.03e-31	-	-	-	S	-	-	-	Family of unknown function (DUF5388)
PAMFEDIP_02837	1.18e-184	soj	-	-	D	-	-	-	CobQ CobB MinD ParA nucleotide binding domain protein
PAMFEDIP_02838	5.15e-174	-	-	-	L	-	-	-	Replication protein
PAMFEDIP_02839	1.32e-107	-	2.5.1.74	-	H	ko:K02548	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01006	UbiA prenyltransferase family
PAMFEDIP_02840	2.26e-39	-	-	-	L	-	-	-	manually curated
PAMFEDIP_02841	1.18e-194	glcU	-	-	U	ko:K05340	-	ko00000,ko02000	sugar transport
PAMFEDIP_02842	2.87e-270	yfhO	-	-	S	-	-	-	Bacterial membrane protein YfhO
PAMFEDIP_02843	1.95e-114	-	-	-	L	ko:K07483,ko:K09936	ko02024,map02024	ko00000,ko00001,ko02000	Helix-turn-helix domain
PAMFEDIP_02844	4.05e-211	-	-	-	L	-	-	-	PFAM Integrase catalytic region
PAMFEDIP_02845	2.67e-75	-	-	-	-	-	-	-	-
PAMFEDIP_02846	2.54e-42	cspA	-	-	K	ko:K03704	-	ko00000,ko03000	Cold shock protein
PAMFEDIP_02847	4.19e-54	-	-	-	-	-	-	-	-
PAMFEDIP_02848	1.56e-71	-	-	-	S	-	-	-	Bacterial protein of unknown function (DUF916)
PAMFEDIP_02849	3.17e-170	-	-	-	S	-	-	-	WxL domain surface cell wall-binding
PAMFEDIP_02850	1.63e-176	yesN	-	-	T	ko:K07720	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
PAMFEDIP_02851	3.08e-113	-	-	-	K	-	-	-	Winged helix DNA-binding domain
PAMFEDIP_02852	3.81e-150	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PAMFEDIP_02853	0.0	pckA	4.1.1.49	-	H	ko:K01610	ko00010,ko00020,ko00620,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00710,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Phosphoenolpyruvate carboxykinase
PAMFEDIP_02854	4.45e-38	-	-	-	-	-	-	-	-
PAMFEDIP_02855	0.0	gadB	4.1.1.15, 4.1.2.27	-	E	ko:K01580,ko:K01634	ko00250,ko00410,ko00430,ko00600,ko00650,ko01100,ko01110,ko01120,ko02024,ko04071,ko04727,ko04940,map00250,map00410,map00430,map00600,map00650,map01100,map01110,map01120,map02024,map04071,map04727,map04940	ko00000,ko00001,ko00002,ko01000	Belongs to the group II decarboxylase family
PAMFEDIP_02856	1.88e-96	-	-	-	M	-	-	-	PFAM NLP P60 protein
PAMFEDIP_02857	6.18e-71	-	-	-	-	-	-	-	-
PAMFEDIP_02858	5.77e-81	-	-	-	-	-	-	-	-
PAMFEDIP_02860	9.39e-84	-	-	-	-	-	-	-	-
PAMFEDIP_02862	1.12e-134	-	-	-	K	-	-	-	transcriptional regulator
PAMFEDIP_02863	4.84e-230	ywbN	-	-	P	ko:K07223,ko:K16301	-	ko00000,ko01000,ko02000	Peroxidase
PAMFEDIP_02864	4.16e-175	menG	2.1.1.163, 2.1.1.201	-	H	ko:K03183	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
PAMFEDIP_02865	1.5e-165	-	-	-	S	-	-	-	Gram-negative-bacterium-type cell wall biogenesis
PAMFEDIP_02866	8.06e-232	-	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase family
PAMFEDIP_02867	0.0	cadA	3.6.3.3, 3.6.3.5	-	P	ko:K01534	-	ko00000,ko01000	P-type ATPase
PAMFEDIP_02868	9.44e-183	glpF	-	-	U	ko:K02440	-	ko00000,ko02000	Belongs to the MIP aquaporin (TC 1.A.8) family
PAMFEDIP_02869	5.73e-73	trxA3	-	-	O	ko:K03671	ko04621,ko05418,map04621,map05418	ko00000,ko00001,ko03110	Thioredoxin-like domain
PAMFEDIP_02870	4.82e-55	yrkD	-	-	S	-	-	-	Metal-sensitive transcriptional repressor
PAMFEDIP_02871	1.01e-26	-	-	-	-	-	-	-	-
PAMFEDIP_02872	4.27e-126	dpsB	-	-	P	-	-	-	Belongs to the Dps family
PAMFEDIP_02873	2.98e-44	copZ	-	-	P	-	-	-	Heavy-metal-associated domain
PAMFEDIP_02874	1.82e-152	rcfA	-	-	K	ko:K21562	-	ko00000,ko03000	Transcriptional regulator, Crp Fnr family
PAMFEDIP_02875	0.0	pepO	-	-	O	ko:K07386	-	ko00000,ko01000,ko01002	Peptidase family M13
PAMFEDIP_02876	1.06e-106	yoaA	-	-	J	-	-	-	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
PAMFEDIP_02877	0.0	nox	1.6.3.4	-	C	ko:K17869	-	ko00000,ko01000	NADH oxidase
PAMFEDIP_02878	0.0	-	-	-	S	-	-	-	Leucine-rich repeat (LRR) protein
PAMFEDIP_02879	1.83e-235	-	-	-	S	-	-	-	Cell surface protein
PAMFEDIP_02880	8.67e-160	-	-	-	S	-	-	-	WxL domain surface cell wall-binding
PAMFEDIP_02881	4.23e-129	-	-	-	S	-	-	-	WxL domain surface cell wall-binding
PAMFEDIP_02882	7.83e-60	-	-	-	-	-	-	-	-
PAMFEDIP_02883	8.19e-134	yezE	-	-	K	ko:K16137	-	ko00000,ko03000	Bacterial regulatory proteins, tetR family
PAMFEDIP_02884	1.03e-65	-	-	-	-	-	-	-	-
PAMFEDIP_02885	9.34e-317	-	-	-	S	-	-	-	Putative metallopeptidase domain
PAMFEDIP_02886	3.7e-279	-	-	-	S	-	-	-	associated with various cellular activities
PAMFEDIP_02887	1.95e-140	aqpZ	-	-	U	ko:K06188	-	ko00000,ko02000	Belongs to the MIP aquaporin (TC 1.A.8) family
PAMFEDIP_02888	0.0	ubiB	-	-	S	ko:K03688	-	ko00000	ABC1 family
PAMFEDIP_02889	0.0	brnQ	-	-	U	ko:K03311	-	ko00000	Component of the transport system for branched-chain amino acids
PAMFEDIP_02890	0.0	-	3.2.1.40	-	G	ko:K05989	-	ko00000,ko01000	Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain
PAMFEDIP_02891	2.9e-293	-	-	-	P	ko:K06610	-	ko00000,ko02000	Sugar (and other) transporter
PAMFEDIP_02892	0.0	ram2	3.2.1.40	-	G	ko:K05989	-	ko00000,ko01000	Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain
PAMFEDIP_02893	5.91e-297	-	-	-	P	ko:K06610	-	ko00000,ko02000	Major Facilitator Superfamily
PAMFEDIP_02894	1.29e-235	-	-	-	K	-	-	-	helix_turn_helix, arabinose operon control protein
PAMFEDIP_02895	3.38e-50	fic	-	-	D	ko:K04095	-	ko00000,ko03036	Fic/DOC family
PAMFEDIP_02896	1.11e-33	fic	-	-	D	ko:K04095	-	ko00000,ko03036	Fic/DOC family
PAMFEDIP_02897	6.61e-29	fic	-	-	D	ko:K04095	-	ko00000,ko03036	Fic/DOC family
PAMFEDIP_02898	5.55e-100	-	-	-	K	ko:K07726	-	ko00000,ko03000	Helix-turn-helix XRE-family like proteins
PAMFEDIP_02899	1.55e-230	galR	-	-	K	ko:K02529	-	ko00000,ko03000	Transcriptional regulator
PAMFEDIP_02900	0.0	galT	2.7.7.12	-	G	ko:K00965	ko00052,ko00520,ko01100,ko04917,map00052,map00520,map01100,map04917	ko00000,ko00001,ko00002,ko01000	UDP-glucose--hexose-1-phosphate uridylyltransferase
PAMFEDIP_02901	2.97e-244	galE	5.1.3.2	-	M	ko:K01784	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the NAD(P)-dependent epimerase dehydratase family
PAMFEDIP_02902	1.92e-285	galK	2.7.1.6	-	F	ko:K00849	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
PAMFEDIP_02903	0.0	lacL	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 2 family
PAMFEDIP_02904	5.49e-237	lacM	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	beta-galactosidase
PAMFEDIP_02905	0.0	melA	3.2.1.22	-	G	ko:K07407	ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603	ko00000,ko00001,ko01000	alpha-galactosidase
PAMFEDIP_02906	0.0	lacP	-	-	G	ko:K11104,ko:K16209	-	ko00000,ko02000	Transporter
PAMFEDIP_02907	3.51e-252	galM3	5.1.3.3	-	G	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the interconversion of alpha and beta anomers of maltose
PAMFEDIP_02908	3.69e-232	galR	-	-	K	ko:K02529	-	ko00000,ko03000	Transcriptional regulator
PAMFEDIP_02909	1.42e-245	tas3	-	-	C	ko:K19265	-	ko00000,ko01000	Aldo keto reductase family protein
PAMFEDIP_02910	2.86e-85	-	-	-	S	-	-	-	pyridoxamine 5-phosphate
PAMFEDIP_02911	0.0	-	1.3.5.4	-	C	ko:K00244	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	ko00000,ko00001,ko00002,ko01000	FAD binding domain
PAMFEDIP_02912	1.23e-228	apbE3	2.7.1.180	-	H	ko:K03734	-	ko00000,ko01000	Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
PAMFEDIP_02913	5.56e-167	aroD	4.2.1.10	-	E	ko:K03785	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis-dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3- dehydroshikimate
PAMFEDIP_02914	1.33e-274	-	-	-	G	-	-	-	Transporter
PAMFEDIP_02915	1.66e-215	aroE	1.1.1.25	-	E	ko:K00014	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
PAMFEDIP_02916	5.79e-209	-	-	-	K	-	-	-	Transcriptional regulator, LysR family
PAMFEDIP_02917	5.78e-269	-	-	-	G	-	-	-	Major Facilitator Superfamily
PAMFEDIP_02918	2.97e-83	-	-	-	-	-	-	-	-
PAMFEDIP_02919	1.78e-198	estA	-	-	S	-	-	-	Putative esterase
PAMFEDIP_02920	5.44e-174	-	-	-	K	-	-	-	UTRA domain
PAMFEDIP_02921	0.0	pts29C	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PAMFEDIP_02922	1.67e-208	murQ	4.2.1.126	-	G	ko:K07106	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
PAMFEDIP_02923	6.87e-202	-	-	-	G	-	-	-	BadF/BadG/BcrA/BcrD ATPase family
PAMFEDIP_02924	2.26e-269	-	-	-	S	ko:K09963	-	ko00000	Bacterial protein of unknown function (DUF871)
PAMFEDIP_02925	0.0	bglH	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
PAMFEDIP_02926	0.0	bglP	-	-	G	ko:K02755,ko:K02756,ko:K02757	ko02060,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
PAMFEDIP_02927	3.72e-200	bglG4	-	-	K	ko:K03488	-	ko00000,ko03000	CAT RNA binding domain
PAMFEDIP_02928	0.0	pbg9	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
PAMFEDIP_02929	0.0	bglH	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
PAMFEDIP_02930	0.0	pts33BCA	-	-	G	ko:K02755,ko:K02756,ko:K02757	ko02060,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
PAMFEDIP_02931	1.3e-203	bglG5	-	-	K	ko:K03488	-	ko00000,ko03000	CAT RNA binding domain
PAMFEDIP_02932	0.0	treP	2.4.1.64	GH65	G	ko:K05342	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	hydrolase, family 65, central catalytic
PAMFEDIP_02933	1.08e-221	cytR	-	-	K	ko:K02529,ko:K03604	-	ko00000,ko03000	Transcriptional regulator, LacI family
PAMFEDIP_02934	0.0	-	-	-	G	ko:K16211	-	ko00000,ko02000	Major Facilitator
PAMFEDIP_02935	0.0	agl	3.2.1.20	GH31	G	ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 31 family
PAMFEDIP_02936	1.31e-29	pts14C	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PAMFEDIP_02938	1.41e-163	-	-	-	P	-	-	-	integral membrane protein, YkoY family
PAMFEDIP_02940	3.47e-47	tnpR	-	-	L	-	-	-	Resolvase, N terminal domain
PAMFEDIP_02942	8.81e-48	-	-	-	L	-	-	-	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
PAMFEDIP_02944	8.72e-163	tnp1216	-	-	L	ko:K07498	-	ko00000	DDE domain
PAMFEDIP_02945	3.55e-76	-	-	-	-	-	-	-	-
PAMFEDIP_02946	2.43e-91	-	-	-	S	-	-	-	Pyrimidine dimer DNA glycosylase