ORF_ID e_value Gene_name EC_number CAZy COGs KEGG_ko KEGG_Pathway BRITE Description
PDDFDHOE_00001 1.05e-120 - - - K ko:K03088 - ko00000,ko03021 ECF sigma factor
PDDFDHOE_00002 0.0 - - - M - - - Alpha-galactosidase. Removes both branched alpha-1,3- linked galactose residues of blood group B antigens and linear alpha-1,3-linked galactose structures
PDDFDHOE_00003 1e-310 - - - S - - - hydrolase activity, acting on glycosyl bonds
PDDFDHOE_00006 1.13e-118 ribH 2.5.1.78 - H ko:K00794 ko00740,ko01100,ko01110,map00740,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin
PDDFDHOE_00007 3.46e-144 - - - S - - - Tetratricopeptide repeat protein
PDDFDHOE_00008 1.03e-264 recF - - L ko:K03629 ko03440,map03440 ko00000,ko00001,ko03400 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
PDDFDHOE_00009 8.02e-59 - - - S - - - COG NOG38282 non supervised orthologous group
PDDFDHOE_00010 2.25e-201 - 3.1.3.15 - E ko:K04486 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 COG COG1387 Histidinol phosphatase and related hydrolases of the PHP family
PDDFDHOE_00011 4.83e-133 fthC 6.3.3.2 - H ko:K01934 ko00670,ko01100,map00670,map01100 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score 8.96
PDDFDHOE_00012 0.0 ctp 3.4.21.102 - M ko:K03797 - ko00000,ko01000,ko01002 Belongs to the peptidase S41A family
PDDFDHOE_00013 1.08e-102 comEB 3.5.4.12 - F ko:K01493 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000,ko02044 Cytidine and deoxycytidylate deaminase zinc-binding region
PDDFDHOE_00014 1.03e-108 - - - S - - - COG NOG30732 non supervised orthologous group
PDDFDHOE_00015 0.0 dcp 3.4.15.5, 3.4.24.70 - E ko:K01284,ko:K01414 - ko00000,ko01000,ko01002 Psort location Cytoplasmic, score
PDDFDHOE_00016 7.26e-221 gap 1.2.1.12 - C ko:K00134 ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
PDDFDHOE_00017 3.29e-83 mscL - - M ko:K03282 - ko00000,ko02000 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
PDDFDHOE_00018 0.0 guaA 6.3.5.2 - F ko:K01951 ko00230,ko00983,ko01100,map00230,map00983,map01100 ko00000,ko00001,ko00002,ko01000,ko01002 Catalyzes the synthesis of GMP from XMP
PDDFDHOE_00019 6.32e-294 - 2.7.1.1 - G ko:K00844 ko00010,ko00051,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04910,ko04930,ko04973,ko05230,map00010,map00051,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200,map04066,map04910,map04930,map04973,map05230 ko00000,ko00001,ko00002,ko01000,ko04131 Hexokinase
PDDFDHOE_00020 0.0 - - - G - - - Belongs to the glycosyl hydrolase 2 family
PDDFDHOE_00021 0.0 - - - T ko:K02481 - ko00000,ko02022 acetoacetate metabolism regulatory protein AtoC
PDDFDHOE_00022 0.0 cdr - - P - - - Belongs to the sulfur carrier protein TusA family
PDDFDHOE_00023 1.42e-76 - - - K - - - Transcriptional regulator, MarR
PDDFDHOE_00024 0.0 - - - S - - - PS-10 peptidase S37
PDDFDHOE_00025 3.3e-145 - - - S - - - COG NOG26965 non supervised orthologous group
PDDFDHOE_00026 1.41e-154 - - - M - - - COG NOG27406 non supervised orthologous group
PDDFDHOE_00027 0.0 nagA - - G - - - b-glycosidase, glycoside hydrolase family 3 protein
PDDFDHOE_00028 1.13e-217 - 3.1.3.5, 3.6.1.45 - F ko:K01081,ko:K11751 ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110 ko00000,ko00001,ko01000 Ser Thr phosphatase family protein
PDDFDHOE_00029 5.97e-188 ushA 3.1.3.5 - F ko:K01081 ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110 ko00000,ko00001,ko01000 5'-nucleotidase, C-terminal domain
PDDFDHOE_00030 0.0 - - - - - - - -
PDDFDHOE_00031 9.19e-209 - - - M - - - Putative OmpA-OmpF-like porin family
PDDFDHOE_00032 8.98e-90 - - - S - - - Domain of unknown function (DUF4369)
PDDFDHOE_00033 1.69e-183 - - - S - - - Beta-lactamase superfamily domain
PDDFDHOE_00034 1.95e-316 metZ 2.5.1.49 - E ko:K01740,ko:K10764 ko00270,ko00920,ko01100,map00270,map00920,map01100 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score
PDDFDHOE_00035 9.95e-209 - 3.5.1.28 - M ko:K01448 ko01503,map01503 ko00000,ko00001,ko00002,ko01000,ko01011,ko03036 N-acetylmuramoyl-L-alanine amidase
PDDFDHOE_00036 6.82e-230 - - - S - - - Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_00037 0.0 - - - P - - - Type I phosphodiesterase / nucleotide pyrophosphatase
PDDFDHOE_00038 0.0 - 2.1.3.15, 6.4.1.3 - I ko:K01966 ko00280,ko00630,ko00640,ko01100,ko01120,ko01130,ko01200,map00280,map00630,map00640,map01100,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Carboxyl transferase domain
PDDFDHOE_00039 1.85e-90 - 6.4.1.1 - I ko:K01960 ko00020,ko00620,ko00720,ko01100,ko01120,ko01200,ko01230,map00020,map00620,map00720,map01100,map01120,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Biotin-requiring enzyme
PDDFDHOE_00040 0.0 accC 6.3.4.14, 6.4.1.2, 6.4.1.3 - I ko:K01961,ko:K01965 ko00061,ko00280,ko00620,ko00630,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00280,map00620,map00630,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212 ko00000,ko00001,ko00002,ko01000 Biotin carboxylase
PDDFDHOE_00041 1.25e-72 - - - O ko:K03671 ko04621,ko05418,map04621,map05418 ko00000,ko00001,ko03110 Belongs to the thioredoxin family
PDDFDHOE_00043 5.88e-84 - - - - - - - -
PDDFDHOE_00044 2.72e-107 - - - - - - - -
PDDFDHOE_00045 5.63e-163 - - - - - - - -
PDDFDHOE_00046 1.62e-38 - - - S - - - Domain of unknown function (DUF4468) with TBP-like fold
PDDFDHOE_00047 0.0 - - - L - - - Helicase C-terminal domain protein
PDDFDHOE_00048 3.22e-65 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_00049 0.0 - 5.99.1.2 - L ko:K03169 - ko00000,ko01000,ko03032 COG0550 Topoisomerase IA
PDDFDHOE_00050 3.7e-199 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_00052 1.21e-170 - - - U - - - Type IV secretory system Conjugative DNA transfer
PDDFDHOE_00053 7.66e-129 ce 5.1.3.8 - G ko:K01787 ko00520,map00520 ko00000,ko00001,ko01000 COG COG2942 N-acyl-D-glucosamine 2-epimerase
PDDFDHOE_00054 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PDDFDHOE_00055 0.0 - - - F ko:K21572 - ko00000,ko02000 SusD family
PDDFDHOE_00056 0.0 - - - S - - - Domain of unknown function (DUF5018)
PDDFDHOE_00057 0.0 - - - S - - - Domain of unknown function
PDDFDHOE_00058 0.0 - - - S - - - C terminal of Calcineurin-like phosphoesterase
PDDFDHOE_00059 0.0 - 3.1.1.53 - G ko:K05970 - ko00000,ko01000 COG NOG04984 non supervised orthologous group
PDDFDHOE_00060 0.0 - - - S - - - Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_00061 0.0 - - - T - - - Psort location CytoplasmicMembrane, score
PDDFDHOE_00062 6.95e-111 - - - S - - - Psort location CytoplasmicMembrane, score 9.46
PDDFDHOE_00063 0.0 - - - H ko:K02014 - ko00000,ko02000 COG COG4771 Outer membrane receptor for ferrienterochelin and colicins
PDDFDHOE_00064 1.67e-99 - - - S - - - COG COG4771 Outer membrane receptor for ferrienterochelin and colicins
PDDFDHOE_00065 0.0 - - - S ko:K07079 - ko00000 of the aldo keto reductase family
PDDFDHOE_00066 0.0 yccM - - C - - - Psort location CytoplasmicMembrane, score
PDDFDHOE_00067 0.0 - - - P - - - Carboxypeptidase regulatory-like domain
PDDFDHOE_00068 2.11e-223 - - - PT - - - Sigma factor regulatory protein, FecR PupR family
PDDFDHOE_00069 4.26e-121 - - - K ko:K03088 - ko00000,ko03021 RNA polymerase sigma-70 factor, ECF subfamily K00960
PDDFDHOE_00070 4.49e-185 - - - K - - - COG NOG38984 non supervised orthologous group
PDDFDHOE_00071 7.33e-141 - - - S - - - COG NOG23385 non supervised orthologous group
PDDFDHOE_00072 0.0 helD 3.6.4.12 - L ko:K03657 ko03420,ko03430,map03420,map03430 ko00000,ko00001,ko01000,ko03400 COG COG3973 Superfamily I DNA and RNA helicases
PDDFDHOE_00073 0.0 - - - S - - - response regulator aspartate phosphatase
PDDFDHOE_00074 3.89e-90 - - - - - - - -
PDDFDHOE_00075 5.64e-286 - - - MO - - - Bacterial group 3 Ig-like protein
PDDFDHOE_00076 5.34e-162 - - - S ko:K03744 - ko00000 LemA family
PDDFDHOE_00077 3.37e-222 - - - S - - - Protein of unknown function (DUF3137)
PDDFDHOE_00078 6.75e-166 - - - L - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_00079 1.23e-308 - - - V - - - COG0534 Na -driven multidrug efflux pump
PDDFDHOE_00080 5.41e-310 - 2.7.2.4 - E ko:K00928 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Aspartate kinase
PDDFDHOE_00081 3.64e-179 proC 1.5.1.2 - E ko:K00286 ko00330,ko01100,ko01110,ko01130,ko01230,map00330,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
PDDFDHOE_00082 6.64e-136 fklB 5.2.1.8 - G ko:K03772,ko:K03773 - ko00000,ko01000,ko03110 Peptidyl-prolyl cis-trans isomerase
PDDFDHOE_00083 1.7e-201 - 5.2.1.8 - M ko:K03772,ko:K03773 - ko00000,ko01000,ko03110 Peptidyl-prolyl cis-trans isomerase
PDDFDHOE_00084 3.43e-106 asnC - - K ko:K03718 - ko00000,ko03000 Transcriptional regulator, AsnC family
PDDFDHOE_00085 1.27e-70 - - - S - - - Psort location CytoplasmicMembrane, score
PDDFDHOE_00087 0.0 - - - K - - - Transcriptional regulator
PDDFDHOE_00088 0.0 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_00089 0.0 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_00090 6.85e-197 ddpX 3.4.13.22 - M ko:K08641 ko01502,ko02020,map01502,map02020 ko00000,ko00001,ko00002,ko01000,ko01002,ko01011,ko01504 Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
PDDFDHOE_00091 1.83e-278 - - - L - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_00092 0.0 - 3.2.1.21 GH3 G ko:K05349 ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110 ko00000,ko00001,ko01000 Glycosyl hydrolase family 3 C-terminal domain protein
PDDFDHOE_00094 1.56e-130 - - - K ko:K03088 - ko00000,ko03021 RNA polymerase sigma-70 factor
PDDFDHOE_00095 1.47e-212 - - - PT - - - Domain of unknown function (DUF4974)
PDDFDHOE_00096 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PDDFDHOE_00097 0.0 - - - P ko:K21572 - ko00000,ko02000 non supervised orthologous group
PDDFDHOE_00098 1.88e-222 - - - S - - - Domain of unknown function (DUF4959)
PDDFDHOE_00099 0.0 - - - E - - - COG NOG04153 non supervised orthologous group
PDDFDHOE_00100 0.0 - - - M - - - Psort location OuterMembrane, score
PDDFDHOE_00101 1.97e-230 - 3.1.3.2 - S ko:K14379 ko00740,ko01100,ko04142,ko04380,ko05323,map00740,map01100,map04142,map04380,map05323 ko00000,ko00001,ko01000 Purple acid phosphatase
PDDFDHOE_00102 0.0 mscM - - M - - - Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_00103 3.43e-215 yrbG - - P ko:K07301 - ko00000,ko02000 K -dependent Na Ca exchanger
PDDFDHOE_00104 0.0 - - - S - - - COG NOG30867 non supervised orthologous group
PDDFDHOE_00105 6.25e-307 - - - O - - - protein conserved in bacteria
PDDFDHOE_00106 7.73e-230 - - - S - - - Metalloenzyme superfamily
PDDFDHOE_00107 7.66e-236 - - - S ko:K07133 - ko00000 AAA domain
PDDFDHOE_00108 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PDDFDHOE_00109 1.07e-275 - - - GM ko:K21572 - ko00000,ko02000 Pfam:SusD
PDDFDHOE_00110 1.08e-199 - - - M - - - Glycosyl hydrolase family 30 TIM-barrel domain
PDDFDHOE_00111 6.31e-167 - - - N - - - domain, Protein
PDDFDHOE_00112 3.28e-302 - 2.4.1.281 - G ko:K16212 - ko00000,ko01000 Converts 4-O-beta-D-mannopyranosyl-D-glucopyranose (Man- Glc) to mannose 1-phosphate (Man1P) and glucose
PDDFDHOE_00113 0.0 - - - E - - - Sodium:solute symporter family
PDDFDHOE_00114 0.0 - - - S - - - PQQ enzyme repeat protein
PDDFDHOE_00115 2.8e-278 yghO - - K - - - COG NOG07967 non supervised orthologous group
PDDFDHOE_00116 0.0 parE - - L ko:K02622 - ko00000,ko01000,ko02048,ko03032,ko03036 COG0187 Type IIA topoisomerase (DNA gyrase topo II topoisomerase IV) B subunit
PDDFDHOE_00117 1.3e-104 coaD 2.7.7.3 - H ko:K00954 ko00770,ko01100,map00770,map01100 ko00000,ko00001,ko00002,ko01000 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
PDDFDHOE_00118 0.0 ctpA 3.4.21.102 - M ko:K03797 - ko00000,ko01000,ko01002 Belongs to the peptidase S41A family
PDDFDHOE_00119 0.0 - - - H - - - Outer membrane protein beta-barrel family
PDDFDHOE_00120 1.41e-119 - - - K ko:K03088 - ko00000,ko03021 RNA polymerase sigma-70 factor, ECF subfamily
PDDFDHOE_00121 2.43e-230 - - - PT - - - Sigma factor regulatory protein, FecR PupR family
PDDFDHOE_00122 2.07e-90 - - - - - - - -
PDDFDHOE_00123 8.41e-142 - - - L - - - DNA-binding protein
PDDFDHOE_00124 2.52e-76 - - - S - - - cog cog3943
PDDFDHOE_00126 0.0 - - - M - - - COG NOG07608 non supervised orthologous group
PDDFDHOE_00127 3.73e-207 - - - S - - - Domain of unknown function (DUF4361)
PDDFDHOE_00128 0.0 - - - P ko:K21572 - ko00000,ko02000 Psort location OuterMembrane, score
PDDFDHOE_00129 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PDDFDHOE_00130 0.0 - - - S - - - amine dehydrogenase activity
PDDFDHOE_00131 0.0 - - - P - - - TonB-dependent Receptor Plug Domain
PDDFDHOE_00132 0.0 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
PDDFDHOE_00133 2.81e-231 - 3.2.1.14, 3.2.1.4 GH18,GH5,GH9 G ko:K01179,ko:K01183 ko00500,ko00520,ko01100,map00500,map00520,map01100 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 18 family
PDDFDHOE_00134 0.0 - - - P - - - Domain of unknown function (DUF4976)
PDDFDHOE_00136 6.43e-239 - - - K - - - transcriptional regulator (AraC family)
PDDFDHOE_00137 4.85e-168 sdhC - - C ko:K00241 ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002 Succinate dehydrogenase cytochrome B subunit, b558 family
PDDFDHOE_00138 0.0 sdhA 1.3.5.1, 1.3.5.4 - C ko:K00239 ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko05134,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map05134 ko00000,ko00001,ko00002,ko01000 COG1053 Succinate dehydrogenase fumarate reductase flavoprotein subunit
PDDFDHOE_00139 5.27e-185 frdB 1.3.5.1, 1.3.5.4 - C ko:K00240 ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 COG0479 Succinate dehydrogenase fumarate reductase Fe-S protein subunit
PDDFDHOE_00140 4.33e-300 - - - S - - - protein BT3056 SWALL AAO78162 (EMBL AE016938) (409 aa) fasta scores E()
PDDFDHOE_00141 0.0 - - - P - - - Sulfatase
PDDFDHOE_00142 1.21e-209 - - - K - - - Transcriptional regulator, AraC family
PDDFDHOE_00143 4.32e-232 - - - S - - - COG NOG31846 non supervised orthologous group
PDDFDHOE_00144 1.04e-224 - - - S - - - COG NOG26135 non supervised orthologous group
PDDFDHOE_00145 2.19e-308 - - - M - - - COG NOG24980 non supervised orthologous group
PDDFDHOE_00146 4.94e-109 - - - L - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_00148 2.37e-50 - - - S - - - Domain of unknown function (DUF4248)
PDDFDHOE_00149 0.0 - 3.2.1.22 - G ko:K07407 ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603 ko00000,ko00001,ko01000 alpha-galactosidase
PDDFDHOE_00150 1.66e-257 dprA - - LU ko:K04096 - ko00000 Rossmann fold nucleotide-binding protein involved in DNA uptake
PDDFDHOE_00151 1.66e-92 - - - S ko:K07107 - ko00000,ko01000 acyl-CoA thioester hydrolase, YbgC YbaW family
PDDFDHOE_00152 4.48e-300 prtC - - O ko:K08303 ko05120,map05120 ko00000,ko00001,ko01000,ko01002 Psort location Cytoplasmic, score 8.96
PDDFDHOE_00153 0.0 - - - K - - - Putative ATP-dependent DNA helicase recG C-terminal
PDDFDHOE_00154 4.22e-41 - - - - - - - -
PDDFDHOE_00155 6.56e-48 - - - S - - - COG NOG33922 non supervised orthologous group
PDDFDHOE_00157 4.94e-98 - - - K - - - COG NOG19093 non supervised orthologous group
PDDFDHOE_00158 1.34e-186 pyrK - - C ko:K02823 ko00240,ko01100,map00240,map01100 ko00000,ko00001 Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD( )
PDDFDHOE_00159 2.63e-211 pyrD 1.3.1.14, 1.3.98.1 - F ko:K00226,ko:K17828 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
PDDFDHOE_00160 5.05e-161 trmD 2.1.1.228 - J ko:K00554 - ko00000,ko01000,ko03016 Belongs to the RNA methyltransferase TrmD family
PDDFDHOE_00161 0.0 ligA 6.5.1.2 - L ko:K01972 ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430 ko00000,ko00001,ko01000,ko03032,ko03400 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
PDDFDHOE_00162 1.93e-210 dapA 4.3.3.7 - EM ko:K01714 ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
PDDFDHOE_00164 0.0 - - - M ko:K07001 - ko00000 esterase of the alpha-beta hydrolase superfamily
PDDFDHOE_00165 0.0 htpG - - T ko:K04079 ko04141,ko04151,ko04217,ko04612,ko04621,ko04626,ko04657,ko04659,ko04914,ko04915,ko05200,ko05215,ko05418,map04141,map04151,map04217,map04612,map04621,map04626,map04657,map04659,map04914,map04915,map05200,map05215,map05418 ko00000,ko00001,ko01009,ko03029,ko03051,ko03110,ko04131,ko04147 ATPase histidine kinase DNA gyrase B HSP90 domain protein
PDDFDHOE_00166 0.0 clpC - - O ko:K03696 ko01100,map01100 ko00000,ko03110 Belongs to the ClpA ClpB family
PDDFDHOE_00167 0.0 - - - G - - - Glycosyl hydrolase
PDDFDHOE_00168 0.0 - - - M - - - CotH kinase protein
PDDFDHOE_00169 3.57e-184 - - - S - - - Protein of unknown function (DUF2490)
PDDFDHOE_00170 3.15e-154 - - - S - - - Domain of unknown function (DUF4956)
PDDFDHOE_00171 3.14e-177 - - - S - - - VTC domain
PDDFDHOE_00172 1.79e-244 - - - S - - - Domain of unknown function (DUF4361)
PDDFDHOE_00173 0.0 - - - P ko:K21572 - ko00000,ko02000 Psort location OuterMembrane, score
PDDFDHOE_00174 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PDDFDHOE_00175 0.0 - - - S - - - IPT TIG domain protein
PDDFDHOE_00176 1.46e-127 - - - G - - - COG NOG09951 non supervised orthologous group
PDDFDHOE_00177 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PDDFDHOE_00178 0.0 - - - P ko:K21572 - ko00000,ko02000 SusD family
PDDFDHOE_00179 0.0 - - - M - - - F5/8 type C domain
PDDFDHOE_00180 0.0 - - - V ko:K02004 - ko00000,ko00002,ko02000 FtsX-like permease family
PDDFDHOE_00181 0.0 - - - V ko:K02004 - ko00000,ko00002,ko02000 Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_00182 1.78e-230 - - - V - - - MacB-like periplasmic core domain
PDDFDHOE_00183 6.74e-163 - 3.4.21.89 - U ko:K03100 ko02024,ko03060,map02024,map03060 ko00000,ko00001,ko01000,ko01002 Belongs to the peptidase S26 family
PDDFDHOE_00184 0.0 - - - M - - - Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_00185 4.63e-253 - - - M - - - Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PDDFDHOE_00186 0.0 - - - V - - - Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PDDFDHOE_00187 0.0 - - - MU - - - Psort location OuterMembrane, score
PDDFDHOE_00188 0.0 - - - V - - - Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PDDFDHOE_00189 1.33e-129 - - - S - - - Flavodoxin-like fold
PDDFDHOE_00190 4.18e-285 nspC 4.1.1.96 - E ko:K13747 ko00330,ko01100,map00330,map01100 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score 8.96
PDDFDHOE_00192 1.41e-52 - - - S - - - Domain of unknown function (DUF4133)
PDDFDHOE_00193 0.0 traG - - U - - - Conjugation system ATPase, TraG family
PDDFDHOE_00195 1.61e-102 - - - U - - - Domain of unknown function (DUF4141)
PDDFDHOE_00196 7.03e-172 - - - S - - - Conjugative transposon TraJ protein
PDDFDHOE_00197 7.82e-122 - - - U - - - Conjugative transposon TraK protein
PDDFDHOE_00198 3.43e-44 - - - S - - - Protein of unknown function (DUF3989)
PDDFDHOE_00199 2.71e-162 - - - S - - - Conjugative transposon TraM protein
PDDFDHOE_00200 5.81e-187 - - - U - - - Domain of unknown function (DUF4138)
PDDFDHOE_00201 1.98e-104 - - - S - - - COG NOG19079 non supervised orthologous group
PDDFDHOE_00202 2.19e-63 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_00203 1.2e-94 - - - D - - - Peptidase family M23
PDDFDHOE_00204 4.46e-52 - - - S - - - Bacterial PH domain
PDDFDHOE_00207 0.0 ppdK 2.7.9.1 - G ko:K01006 ko00620,ko00710,ko00720,ko01100,ko01120,ko01200,map00620,map00710,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Belongs to the PEP-utilizing enzyme family
PDDFDHOE_00208 5.73e-120 - - - M - - - Outer membrane protein beta-barrel domain
PDDFDHOE_00209 3.93e-134 - - - M - - - COG NOG19089 non supervised orthologous group
PDDFDHOE_00210 1.26e-145 thiE 2.5.1.3 - H ko:K00788 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko00002,ko01000 Thiamine monophosphate synthase TENI
PDDFDHOE_00211 1.56e-162 moeZ 2.7.7.80, 2.8.1.11 - H ko:K21029,ko:K21147 ko04122,map04122 ko00000,ko00001,ko01000 involved in molybdopterin and thiamine biosynthesis family 2
PDDFDHOE_00212 1.88e-278 thiH 4.1.99.19 - C ko:K03150 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko01000 Thiazole biosynthesis protein ThiH
PDDFDHOE_00213 0.0 thiC 4.1.99.17 - H ko:K03147 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
PDDFDHOE_00214 2.03e-176 thiG 2.8.1.10 - H ko:K03149 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko01000 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S
PDDFDHOE_00215 1.02e-143 thiE 2.5.1.3 - H ko:K00788 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko00002,ko01000 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)
PDDFDHOE_00216 7.03e-40 thiS - - H ko:K03154 ko04122,map04122 ko00000,ko00001 thiamine biosynthesis protein ThiS
PDDFDHOE_00217 0.0 - - - T - - - histidine kinase DNA gyrase B
PDDFDHOE_00218 2.56e-145 sodB 1.15.1.1 - C ko:K04564 ko04013,ko04068,ko04146,ko04211,ko04212,ko04213,ko05016,map04013,map04068,map04146,map04211,map04212,map04213,map05016 ko00000,ko00001,ko01000 Destroys radicals which are normally produced within the cells and which are toxic to biological systems
PDDFDHOE_00219 6.95e-238 ldhA 1.1.1.28 - C ko:K03778 ko00620,ko01120,map00620,map01120 ko00000,ko00001,ko01000 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PDDFDHOE_00220 5.26e-172 - - - S ko:K06911 - ko00000 Belongs to the pirin family
PDDFDHOE_00221 7.53e-157 pdxH 1.4.3.5 - H ko:K00275 ko00750,ko01100,ko01120,map00750,map01100,map01120 ko00000,ko00001,ko00002,ko01000 Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP)
PDDFDHOE_00222 5.27e-181 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_00223 7.84e-264 - - - S ko:K03646 - ko00000,ko02000 Domain of unknown function (DUF4468) with TBP-like fold
PDDFDHOE_00224 3.7e-92 gloA 4.4.1.5 - E ko:K01759 ko00620,map00620 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score 8.96
PDDFDHOE_00225 1.41e-103 - - - - - - - -
PDDFDHOE_00226 7.45e-33 - - - - - - - -
PDDFDHOE_00227 3.1e-172 cypM_1 - - H - - - Methyltransferase domain protein
PDDFDHOE_00228 2.11e-131 - - - CO - - - Redoxin family
PDDFDHOE_00230 4.77e-178 - - - EG - - - Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_00232 2.97e-28 - - - K ko:K03088 - ko00000,ko03021 Sigma-70, region 4
PDDFDHOE_00233 6.42e-18 - - - C - - - lyase activity
PDDFDHOE_00234 1.09e-10 - - - S - - - Domain of unknown function (DUF4252)
PDDFDHOE_00235 1.94e-163 - - - - - - - -
PDDFDHOE_00236 6.27e-131 - - - - - - - -
PDDFDHOE_00237 0.0 - - - S - - - Calycin-like beta-barrel domain
PDDFDHOE_00239 0.0 - - - S - - - amine dehydrogenase activity
PDDFDHOE_00240 0.0 - - - S - - - Fibrobacter succinogenes major domain (Fib_succ_major)
PDDFDHOE_00241 0.0 - - - P ko:K14445 - ko00000,ko02000 Citrate transporter
PDDFDHOE_00242 0.0 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
PDDFDHOE_00243 1.64e-239 holA 2.7.7.7 - L ko:K02340 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 COG1466 DNA polymerase III, delta subunit
PDDFDHOE_00244 7.21e-191 amn 3.2.2.4 - F ko:K01241 ko00230,map00230 ko00000,ko00001,ko01000 COG COG0775 Nucleoside phosphorylase
PDDFDHOE_00245 1.65e-106 - - - V - - - COG NOG14438 non supervised orthologous group
PDDFDHOE_00246 0.0 bpeF - - V ko:K03296 - ko00000 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PDDFDHOE_00247 1.02e-254 - - - M - - - Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PDDFDHOE_00248 0.0 - - - M - - - Efflux transporter, outer membrane factor lipoprotein, NodT family
PDDFDHOE_00249 2.27e-155 - - - S ko:K07164 - ko00000 Zinc ribbon domain protein
PDDFDHOE_00250 3.87e-262 yqfO - - C - - - Belongs to the GTP cyclohydrolase I type 2 NIF3 family
PDDFDHOE_00251 4.69e-94 - - - S - - - Domain of unknown function (DUF4891)
PDDFDHOE_00252 4.03e-62 - - - - - - - -
PDDFDHOE_00253 1.46e-121 - - - S ko:K02069 - ko00000,ko00002,ko02000 Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_00254 0.0 - - - P - - - TonB-dependent Receptor Plug Domain
PDDFDHOE_00255 0.0 - - - S ko:K21572 - ko00000,ko02000 Pfam:SusD
PDDFDHOE_00256 5.93e-193 - - - M - - - COG2335, Secreted and surface protein containing fasciclin-like repeats
PDDFDHOE_00257 5.47e-243 - - - S - - - Domain of unknown function (DUF5007)
PDDFDHOE_00258 0.0 - - - P - - - Carboxypeptidase regulatory-like domain
PDDFDHOE_00259 0.0 - - - GM ko:K21572 - ko00000,ko02000 SusD family
PDDFDHOE_00260 1.15e-178 - - - S - - - Fasciclin domain
PDDFDHOE_00261 0.0 - - - G - - - Domain of unknown function (DUF5124)
PDDFDHOE_00262 0.0 - - - S - - - Concanavalin A-like lectin/glucanases superfamily
PDDFDHOE_00263 0.0 - - - S - - - N-terminal domain of M60-like peptidases
PDDFDHOE_00264 0.0 - - - S - - - Type I phosphodiesterase / nucleotide pyrophosphatase
PDDFDHOE_00265 3.69e-180 - - - - - - - -
PDDFDHOE_00266 5.71e-152 - - - L - - - regulation of translation
PDDFDHOE_00267 2.3e-313 - - - S - - - P-loop ATPase and inactivated derivatives
PDDFDHOE_00268 2e-248 - - - S - - - Leucine rich repeat protein
PDDFDHOE_00269 0.0 - - - U ko:K03561 - ko00000,ko02000 MotA/TolQ/ExbB proton channel family
PDDFDHOE_00270 1.94e-100 - - - U ko:K03559 - ko00000,ko02000 Biopolymer transport protein ExbD/TolR
PDDFDHOE_00271 1.33e-99 - - - U ko:K03559 - ko00000,ko02000 Biopolymer transport protein ExbD/TolR
PDDFDHOE_00272 0.0 - - - - - - - -
PDDFDHOE_00273 0.0 - - - H - - - Psort location OuterMembrane, score
PDDFDHOE_00274 0.0 - 3.2.1.23 - G ko:K12308 ko00052,map00052 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 35 family
PDDFDHOE_00275 4.28e-226 - - - L - - - Phage integrase, N-terminal SAM-like domain
PDDFDHOE_00276 3.17e-185 - - - S - - - Exopolysaccharide biosynthesis protein YbjH
PDDFDHOE_00277 1.57e-298 - - - - - - - -
PDDFDHOE_00278 0.0 - - - S - - - COG NOG33609 non supervised orthologous group
PDDFDHOE_00279 5.37e-217 - - - V - - - AAA domain, putative AbiEii toxin, Type IV TA system
PDDFDHOE_00280 0.0 - - - S - - - ABC-type transport system involved in multi-copper enzyme maturation permease component
PDDFDHOE_00281 0.0 - - - MU - - - Outer membrane efflux protein
PDDFDHOE_00282 1.42e-247 - - - M ko:K03585 ko01501,ko01503,map01501,map01503 ko00000,ko00001,ko00002,ko01504,ko02000,ko03036 Barrel-sandwich domain of CusB or HlyD membrane-fusion
PDDFDHOE_00283 0.0 - - - V ko:K03296 - ko00000 AcrB/AcrD/AcrF family
PDDFDHOE_00284 0.0 - - - V - - - AcrB/AcrD/AcrF family
PDDFDHOE_00285 8.97e-159 - - - - - - - -
PDDFDHOE_00286 0.0 - - - M ko:K07001 - ko00000 Phospholipase, patatin family
PDDFDHOE_00287 2.42e-282 - - - M ko:K03585 ko01501,ko01503,map01501,map01503 ko00000,ko00001,ko00002,ko01504,ko02000,ko03036 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PDDFDHOE_00288 0.0 - - - V - - - Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PDDFDHOE_00289 0.0 - - - M ko:K18139,ko:K18300 ko01501,ko02024,map01501,map02024 ko00000,ko00001,ko00002,ko01504,ko02000 Efflux transporter, outer membrane factor lipoprotein, NodT family
PDDFDHOE_00290 0.0 pfp 2.7.1.11, 2.7.1.90 - H ko:K00895,ko:K21071 ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130 ko00000,ko00001,ko01000 Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions
PDDFDHOE_00291 2.63e-208 acm - - M ko:K07273 - ko00000 phage tail component domain protein
PDDFDHOE_00292 1.19e-314 lpdA 1.8.1.4 - C ko:K00382 ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200 br01601,ko00000,ko00001,ko00002,ko01000,ko04147 Dihydrolipoyl dehydrogenase
PDDFDHOE_00293 4.3e-169 lplA 6.3.1.20 - H ko:K03800 ko00785,ko01100,map00785,map01100 ko00000,ko00001,ko01000 Lipoate-protein ligase
PDDFDHOE_00294 1.02e-299 bfmBB 2.3.1.61 - C ko:K00658 ko00020,ko00310,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00310,map01100,map01110,map01120,map01130,map01200 br01601,ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score 9.26
PDDFDHOE_00295 0.0 bfmBAB 1.2.4.4 - C ko:K11381 ko00280,ko00640,ko01100,ko01110,ko01130,map00280,map00640,map01100,map01110,map01130 br01601,ko00000,ko00001,ko00002,ko01000 dehydrogenase E1 component
PDDFDHOE_00296 1.46e-122 isiB - - C ko:K03839 - ko00000 Low-potential electron donor to a number of redox enzymes
PDDFDHOE_00297 2.85e-208 prmA - - J ko:K02687 - ko00000,ko01000,ko03009 Methylates ribosomal protein L11
PDDFDHOE_00298 5.02e-158 - - - S - - - Psort location OuterMembrane, score
PDDFDHOE_00299 0.0 - - - I - - - Psort location OuterMembrane, score
PDDFDHOE_00300 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PDDFDHOE_00301 0.0 - - - H - - - Susd and RagB outer membrane lipoprotein
PDDFDHOE_00302 5.43e-186 - - - - - - - -
PDDFDHOE_00303 4.15e-108 guaD 3.5.4.3 - FJ ko:K01487 ko00230,ko01100,map00230,map01100 ko00000,ko00001,ko01000 Cytidine and deoxycytidylate deaminase zinc-binding region
PDDFDHOE_00304 3.35e-247 - - - S - - - Oxidoreductase, NAD-binding domain protein
PDDFDHOE_00305 4.44e-222 - - - - - - - -
PDDFDHOE_00306 2.74e-96 - - - - - - - -
PDDFDHOE_00307 1.91e-98 - - - C - - - lyase activity
PDDFDHOE_00308 7.19e-115 - - - K ko:K03088 - ko00000,ko03021 Belongs to the sigma-70 factor family. ECF subfamily
PDDFDHOE_00310 4.11e-191 - - - ET - - - COG0834 ABC-type amino acid transport signal transduction systems periplasmic component domain
PDDFDHOE_00311 0.0 - - - H - - - COG NOG07963 non supervised orthologous group
PDDFDHOE_00312 4.3e-124 porG 1.2.7.3 - C ko:K00177 ko00020,ko00720,ko01100,ko01120,ko01200,map00020,map00720,map01100,map01120,map01200 br01601,ko00000,ko00001,ko00002,ko01000 2-oxoacid ferredoxin flavodoxin oxidoreductase, gamma subunit
PDDFDHOE_00313 3.43e-187 vorA 1.2.7.11, 1.2.7.3 - C ko:K00175 ko00010,ko00020,ko00620,ko00650,ko00720,ko01100,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00650,map00720,map01100,map01120,map01130,map01200 br01601,ko00000,ko00001,ko00002,ko01000 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
PDDFDHOE_00314 1.44e-31 - - - - - - - -
PDDFDHOE_00315 1.88e-251 vorB 1.2.7.11, 1.2.7.3 - C ko:K00174 ko00010,ko00020,ko00620,ko00650,ko00720,ko01100,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00650,map00720,map01100,map01120,map01130,map01200 br01601,ko00000,ko00001,ko00002,ko01000 COG0674 Pyruvate ferredoxin oxidoreductase and related 2-oxoacid ferredoxin
PDDFDHOE_00316 3.12e-38 oorD 1.2.7.3 - C ko:K00176 ko00020,ko00720,ko01100,ko01120,ko01200,map00020,map00720,map01100,map01120,map01200 br01601,ko00000,ko00001,ko00002,ko01000 4Fe-4S binding domain protein
PDDFDHOE_00317 1.77e-61 - - - S - - - TPR repeat
PDDFDHOE_00318 0.0 ravA_1 - - S ko:K03924 - ko00000,ko01000 ATPase family associated with various cellular activities (AAA)
PDDFDHOE_00319 0.0 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_00320 2.96e-94 - - - S ko:K09793 - ko00000 Psort location CytoplasmicMembrane, score 9.46
PDDFDHOE_00321 0.0 - - - P - - - Right handed beta helix region
PDDFDHOE_00322 0.0 - 3.2.1.177 GH31 G ko:K01811 - ko00000,ko01000 Belongs to the glycosyl hydrolase 31 family
PDDFDHOE_00323 0.0 - - - E - - - B12 binding domain
PDDFDHOE_00324 0.0 - - - S ko:K03307 - ko00000 Sodium:solute symporter family
PDDFDHOE_00325 9.39e-182 - - - E - - - Vitamin B12 dependent methionine synthase, activation domain protein
PDDFDHOE_00326 3.73e-240 - 4.1.1.37 - H ko:K01599 ko00860,ko01100,ko01110,map00860,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Uroporphyrinogen decarboxylase (URO-D)
PDDFDHOE_00327 8.68e-159 - - - S - - - SprT-like family
PDDFDHOE_00328 1.51e-259 - - - L - - - Initiator Replication protein
PDDFDHOE_00330 2.15e-139 - - - - - - - -
PDDFDHOE_00331 0.0 - - - - - - - -
PDDFDHOE_00332 0.0 - - - U - - - TraM recognition site of TraD and TraG
PDDFDHOE_00333 3.82e-57 - - - - - - - -
PDDFDHOE_00334 1.2e-60 - - - - - - - -
PDDFDHOE_00335 0.0 - - - U - - - conjugation system ATPase, TraG family
PDDFDHOE_00337 6.75e-41 - - - - - - - -
PDDFDHOE_00338 2.82e-87 - - - S - - - COG NOG30362 non supervised orthologous group
PDDFDHOE_00339 2.15e-145 - - - U - - - COG NOG09946 non supervised orthologous group
PDDFDHOE_00340 4.77e-225 traJ - - S - - - Conjugative transposon TraJ protein
PDDFDHOE_00341 2.51e-143 - - - U - - - Conjugative transposon TraK protein
PDDFDHOE_00342 4.7e-63 - - - S - - - Protein of unknown function (DUF3989)
PDDFDHOE_00343 1.27e-306 traM - - S - - - Conjugative transposon TraM protein
PDDFDHOE_00344 9.5e-238 - - - U - - - Conjugative transposon TraN protein
PDDFDHOE_00345 1.95e-139 - - - S - - - COG NOG19079 non supervised orthologous group
PDDFDHOE_00346 6.05e-220 - - - L - - - CHC2 zinc finger domain protein
PDDFDHOE_00347 2.01e-118 - - - S - - - COG NOG28378 non supervised orthologous group
PDDFDHOE_00348 5.93e-124 - 3.2.1.17 - S ko:K01185 - ko00000,ko01000 lysozyme
PDDFDHOE_00349 3.18e-50 - - - S - - - Psort location Cytoplasmic, score
PDDFDHOE_00350 1.9e-68 - - - - - - - -
PDDFDHOE_00351 1.29e-53 - - - - - - - -
PDDFDHOE_00352 7.72e-51 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_00353 6.23e-56 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_00354 0.0 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_00355 5.21e-44 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_00356 1.91e-142 - 3.6.3.21 - V ko:K02028,ko:K02068 - ko00000,ko00002,ko01000,ko02000 ABC transporter
PDDFDHOE_00357 5.02e-123 - - - S - - - protein containing a ferredoxin domain
PDDFDHOE_00358 9.75e-280 aguA 3.5.3.12 - E ko:K10536 ko00330,ko01100,map00330,map01100 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score 8.96
PDDFDHOE_00359 9.31e-221 - 3.5.1.53 - S ko:K12251 ko00330,ko01100,map00330,map01100 ko00000,ko00001,ko01000 hydrolase, carbon-nitrogen family
PDDFDHOE_00360 1.44e-86 - - - S - - - Psort location CytoplasmicMembrane, score 9.46
PDDFDHOE_00361 0.0 - - - M - - - Sulfatase
PDDFDHOE_00362 0.0 aspS 6.1.1.12 - J ko:K01876 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
PDDFDHOE_00363 2.86e-240 - - - I - - - lipid kinase, YegS Rv2252 BmrU family
PDDFDHOE_00364 2.44e-287 bioF 2.3.1.29, 2.3.1.47 - E ko:K00639,ko:K00652 ko00260,ko00780,ko01100,map00260,map00780,map01100 ko00000,ko00001,ko00002,ko01000,ko01007 Beta-eliminating lyase
PDDFDHOE_00365 5.73e-75 - - - S - - - Lipocalin-like
PDDFDHOE_00366 1.62e-79 - - - - - - - -
PDDFDHOE_00367 0.0 - - - N - - - Leucine rich repeats (6 copies)
PDDFDHOE_00368 0.0 - - - - - - - -
PDDFDHOE_00369 0.0 - - - S - - - Susd and RagB outer membrane lipoprotein
PDDFDHOE_00370 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PDDFDHOE_00371 0.0 - - - S - - - Domain of unknown function (DUF5010)
PDDFDHOE_00373 0.0 - - - G - - - Belongs to the glycosyl hydrolase 2 family
PDDFDHOE_00374 0.0 - - - G - - - Glycosyl hydrolase, family 20, catalytic domain
PDDFDHOE_00376 0.0 - - - T - - - PAS domain S-box protein
PDDFDHOE_00377 2.4e-135 - - - J - - - COG COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins
PDDFDHOE_00378 5.78e-250 - - - S - - - Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_00379 2.2e-120 tdk 2.7.1.21 - F ko:K00857 ko00240,ko00983,ko01100,map00240,map00983,map01100 ko00000,ko00001,ko01000 thymidine kinase
PDDFDHOE_00380 1.57e-100 - - - S - - - COG NOG23390 non supervised orthologous group
PDDFDHOE_00381 8.7e-157 rsmI 2.1.1.198 - H ko:K07056 - ko00000,ko01000,ko03009 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
PDDFDHOE_00382 1.04e-171 - - - S - - - Transposase
PDDFDHOE_00383 1.45e-167 yjjG - - S ko:K07025 - ko00000 HAD hydrolase, TIGR02254 family
PDDFDHOE_00384 4.82e-147 - - - U ko:K05595 - ko00000,ko02000 UPF0056 membrane protein
PDDFDHOE_00385 0.0 - - - S ko:K21572 - ko00000,ko02000 SusD family
PDDFDHOE_00386 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PDDFDHOE_00387 2.99e-172 - - GT4 M ko:K03208 - ko00000 Glycosyl transferase 4-like domain
PDDFDHOE_00388 3.45e-239 - 2.6.1.59 - E ko:K02805 - ko00000,ko01000,ko01007 DegT/DnrJ/EryC1/StrS aminotransferase family
PDDFDHOE_00389 1.46e-262 gmd 4.2.1.47 - M ko:K01711 ko00051,ko00520,ko01100,map00051,map00520,map01100 ko00000,ko00001,ko01000 Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
PDDFDHOE_00390 1.57e-258 fcl 1.1.1.271 - GM ko:K02377 ko00051,ko00520,ko01100,map00051,map00520,map01100 ko00000,ko00001,ko01000 Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction
PDDFDHOE_00391 3.77e-176 - - - M ko:K01991 ko02026,map02026 ko00000,ko00001,ko02000 COG1596 Periplasmic protein involved in polysaccharide export
PDDFDHOE_00392 0.0 - - - DM - - - Chain length determinant protein
PDDFDHOE_00393 3.56e-271 - - - T - - - helix_turn_helix, arabinose operon control protein
PDDFDHOE_00394 2.34e-192 - - - S - - - COG NOG14472 non supervised orthologous group
PDDFDHOE_00395 1.69e-135 coaE 2.7.1.24 - H ko:K00859 ko00770,ko01100,map00770,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
PDDFDHOE_00396 3.12e-95 - - - S - - - COG NOG14473 non supervised orthologous group
PDDFDHOE_00397 6.88e-54 - - - - - - - -
PDDFDHOE_00398 0.0 clpB - - O ko:K03695 ko04213,map04213 ko00000,ko00001,ko03110 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
PDDFDHOE_00399 3.09e-133 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_00400 1.41e-208 cysL - - K - - - LysR substrate binding domain protein
PDDFDHOE_00401 0.0 - - - H - - - COG NOG08812 non supervised orthologous group
PDDFDHOE_00403 2.94e-149 - - - L - - - COG NOG29822 non supervised orthologous group
PDDFDHOE_00404 5.02e-256 - - - U - - - Psort location CytoplasmicMembrane, score
PDDFDHOE_00405 0.0 - - - S - - - P-loop domain protein
PDDFDHOE_00406 2.75e-174 - - - S - - - P-loop domain protein
PDDFDHOE_00407 3.35e-269 - - - S ko:K07133 - ko00000 Psort location Cytoplasmic, score 8.96
PDDFDHOE_00408 6.37e-140 rteC - - S - - - RteC protein
PDDFDHOE_00409 1.83e-101 - - - H - - - dihydrofolate reductase family protein K00287
PDDFDHOE_00410 0.0 zraR - - T ko:K07713 ko02020,map02020 ko00000,ko00001,ko00002,ko02022 Sigma-54 interaction domain protein
PDDFDHOE_00411 1.19e-278 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
PDDFDHOE_00412 0.0 alaC - - E - - - Aminotransferase, class I II
PDDFDHOE_00413 1.04e-141 - - - K ko:K07735 - ko00000,ko03000 Belongs to the UPF0301 (AlgH) family
PDDFDHOE_00414 1.34e-131 speG 2.3.1.57 - J ko:K00657 ko00330,ko01100,ko04216,map00330,map01100,map04216 ko00000,ko00001,ko00002,ko01000 Acetyltransferase, gnat family
PDDFDHOE_00415 1.65e-97 - - - S - - - Psort location CytoplasmicMembrane, score
PDDFDHOE_00416 1.25e-142 recR - - L ko:K06187 ko03440,map03440 ko00000,ko00001,ko03400 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
PDDFDHOE_00417 0.0 - - - E - - - Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
PDDFDHOE_00418 4.21e-144 engB - - D ko:K03978 - ko00000,ko03036 Necessary for normal cell division and for the maintenance of normal septation
PDDFDHOE_00419 1.07e-131 - - - S - - - COG NOG28221 non supervised orthologous group
PDDFDHOE_00421 8.95e-91 - - - S - - - Protein of unknown function (DUF1573)
PDDFDHOE_00422 0.0 - - - S - - - oligopeptide transporter, OPT family
PDDFDHOE_00423 0.0 - - - I - - - pectin acetylesterase
PDDFDHOE_00424 4.46e-227 - - - M - - - Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
PDDFDHOE_00425 1.13e-159 lipB 2.3.1.181 - H ko:K03801 ko00785,ko01100,map00785,map01100 ko00000,ko00001,ko01000 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate
PDDFDHOE_00426 3.39e-199 - - - K - - - methylphosphotriester-DNA alkyltransferase and transcriptional regulator (AraC XylS family)
PDDFDHOE_00427 0.0 copA 3.6.3.4, 3.6.3.54 - P ko:K01533,ko:K17686 ko01524,ko04016,map01524,map04016 ko00000,ko00001,ko01000 Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_00428 7.06e-62 - - - P ko:K08364 - ko00000,ko02000 Heavy metal-associated domain protein
PDDFDHOE_00429 0.0 - - - P - - - COG COG4771 Outer membrane receptor for ferrienterochelin and colicins
PDDFDHOE_00430 8.16e-36 - - - - - - - -
PDDFDHOE_00431 2.71e-206 - - - P - - - Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
PDDFDHOE_00432 4.42e-96 - - - J - - - Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
PDDFDHOE_00433 3.56e-47 - - - S - - - COG NOG14112 non supervised orthologous group
PDDFDHOE_00434 1.47e-207 - - - S - - - Protein of unknown function (DUF3298)
PDDFDHOE_00435 1.4e-144 rsmG 2.1.1.170 - J ko:K03501 - ko00000,ko01000,ko03009,ko03036 Specifically methylates the N7 position of a guanine in 16S rRNA
PDDFDHOE_00436 6.58e-159 - - - P - - - Psort location Cytoplasmic, score
PDDFDHOE_00437 0.0 gcvP 1.4.4.2 - E ko:K00281,ko:K00283 ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200 ko00000,ko00001,ko00002,ko01000 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
PDDFDHOE_00438 4.61e-137 - - - C - - - Nitroreductase family
PDDFDHOE_00439 3.42e-259 hpaIIR 3.1.21.4 - L ko:K01155 - ko00000,ko01000,ko02048 COG NOG26934 non supervised orthologous group
PDDFDHOE_00440 8.77e-137 yigZ - - S - - - YigZ family
PDDFDHOE_00441 2.74e-306 - - - S - - - Conserved protein
PDDFDHOE_00442 4.92e-213 serA 1.1.1.399, 1.1.1.95 - C ko:K00058 ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PDDFDHOE_00443 5.26e-260 serC 2.6.1.52 - E ko:K00831 ko00260,ko00680,ko00750,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map00750,map01100,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
PDDFDHOE_00444 9.36e-317 dbpA 3.6.4.13 - L ko:K05591 - ko00000,ko01000,ko03009 ATP-independent RNA helicase DbpA
PDDFDHOE_00445 1.05e-310 nqrF 1.6.5.8 - C ko:K00351 - ko00000,ko01000 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. The first step is catalyzed by NqrF, which accepts electrons from NADH and reduces ubiquinone-1 to ubisemiquinone by a one-electron transfer pathway
PDDFDHOE_00446 3.08e-124 nqrE 1.6.5.8 - C ko:K00350 - ko00000,ko01000 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
PDDFDHOE_00448 2.3e-142 nqrD 1.6.5.8 - C ko:K00349 - ko00000,ko01000 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
PDDFDHOE_00449 1.27e-154 nqrC 1.6.5.8 - C ko:K00348 - ko00000,ko01000 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
PDDFDHOE_00450 1.24e-278 nqrB 1.6.5.8 - C ko:K00347 - ko00000,ko01000 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
PDDFDHOE_00451 0.0 nqrA 1.6.5.8 - C ko:K00346 - ko00000,ko01000 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
PDDFDHOE_00452 0.0 pepC 3.4.22.40 - E ko:K01372 - ko00000,ko01000,ko01002 Peptidase C1-like family
PDDFDHOE_00453 6.87e-306 - - - M - - - COG NOG26016 non supervised orthologous group
PDDFDHOE_00454 2.1e-165 - - - MU - - - COG NOG27134 non supervised orthologous group
PDDFDHOE_00455 0.0 - - - M - - - COG NOG36677 non supervised orthologous group
PDDFDHOE_00456 0.0 - - - M - - - Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_00457 1.32e-218 - - - S ko:K07011 - ko00000 Glycosyltransferase, group 2 family protein
PDDFDHOE_00458 3.03e-277 - - - M - - - Psort location CytoplasmicMembrane, score
PDDFDHOE_00459 3.91e-113 - 3.5.1.28 - V ko:K01447 - ko00000,ko01000 Psort location Cytoplasmic, score 8.96
PDDFDHOE_00460 2.47e-13 - - - - - - - -
PDDFDHOE_00461 1.99e-99 - - - L - - - COG NOG31453 non supervised orthologous group
PDDFDHOE_00463 4.23e-54 - - - S - - - Domain of unknown function (DUF4248)
PDDFDHOE_00464 1.12e-103 - - - E - - - Glyoxalase-like domain
PDDFDHOE_00465 0.0 - 3.6.4.12 - L ko:K17680 - ko00000,ko01000,ko03029 Psort location Cytoplasmic, score 8.96
PDDFDHOE_00466 3.5e-208 - - - S - - - Domain of unknown function (DUF4373)
PDDFDHOE_00467 1.57e-66 - - - K - - - Helix-turn-helix XRE-family like proteins
PDDFDHOE_00468 3.43e-266 - - - M - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_00469 9.81e-210 - - - M - - - Glycosyltransferase like family 2
PDDFDHOE_00470 0.0 - - - S ko:K03328 - ko00000 COG2244 Membrane protein involved in the export of O-antigen and teichoic acid
PDDFDHOE_00471 1.19e-278 - - - M - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_00472 5.44e-229 - - - M - - - Pfam:DUF1792
PDDFDHOE_00473 2.52e-284 - - - M - - - Glycosyltransferase, group 1 family protein
PDDFDHOE_00474 9.22e-211 - - - M - - - Glycosyltransferase, group 2 family protein
PDDFDHOE_00475 0.0 - - - S - - - Putative polysaccharide deacetylase
PDDFDHOE_00476 1.02e-278 - - - M - - - Psort location CytoplasmicMembrane, score
PDDFDHOE_00477 0.0 - - - M - - - Psort location CytoplasmicMembrane, score
PDDFDHOE_00478 2.61e-259 - - - S - - - Endonuclease Exonuclease phosphatase family protein
PDDFDHOE_00480 0.0 - - - P - - - Psort location OuterMembrane, score
PDDFDHOE_00481 0.0 - - - S ko:K15738 - ko00000,ko02000 ATP-binding cassette protein, ChvD family
PDDFDHOE_00483 1.6e-241 - - - K ko:K13652 - ko00000,ko03000 Bacterial transcription activator, effector binding domain
PDDFDHOE_00484 2.7e-104 - - - KT - - - Bacterial transcription activator, effector binding domain
PDDFDHOE_00485 2.75e-246 - 3.1.3.100 - S ko:K06949 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko01000,ko03009 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
PDDFDHOE_00486 6.57e-177 - - - - - - - -
PDDFDHOE_00487 0.0 xynB - - I - - - pectin acetylesterase
PDDFDHOE_00488 0.0 - - - V - - - Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_00489 9.48e-131 - - - M - - - COG2885 Outer membrane protein and related peptidoglycan-associated
PDDFDHOE_00490 8.25e-167 mtgA 2.4.1.129 GT51 M ko:K03814 ko00550,map00550 ko00000,ko00001,ko01000,ko01003,ko01011 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
PDDFDHOE_00491 0.0 - 6.4.1.1 - C ko:K01960 ko00020,ko00620,ko00720,ko01100,ko01120,ko01200,ko01230,map00020,map00620,map00720,map01100,map01120,map01200,map01230 ko00000,ko00001,ko00002,ko01000 COG5016 Pyruvate oxaloacetate carboxyltransferase
PDDFDHOE_00492 1.17e-117 - - - K ko:K03088 - ko00000,ko03021 Belongs to the sigma-70 factor family. ECF subfamily
PDDFDHOE_00493 7.6e-121 lemA - - S ko:K03744 - ko00000 LemA family
PDDFDHOE_00494 2.25e-216 htpX - - O ko:K03799 - ko00000,ko00002,ko01000,ko01002 Peptidase family M48
PDDFDHOE_00495 2.27e-109 - - - S - - - COG NOG30135 non supervised orthologous group
PDDFDHOE_00496 2e-150 yadS - - S - - - Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_00497 2.21e-255 wecB 5.1.3.14 - M ko:K01791 ko00520,ko01100,ko05111,map00520,map01100,map05111 ko00000,ko00001,ko00002,ko01000,ko01005 Belongs to the UDP-N-acetylglucosamine 2-epimerase family
PDDFDHOE_00499 0.0 - - - M - - - COG NOG06397 non supervised orthologous group
PDDFDHOE_00500 1.78e-301 rarA - - L ko:K07478 - ko00000 COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase
PDDFDHOE_00501 3.09e-71 - - - S - - - 23S rRNA-intervening sequence protein
PDDFDHOE_00502 2.36e-214 hprA 1.1.1.29 - C ko:K00018 ko00260,ko00630,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,map00260,map00630,map00680,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PDDFDHOE_00503 1.01e-272 cydB 1.10.3.14 - C ko:K00426 ko00190,ko01100,ko02020,map00190,map01100,map02020 ko00000,ko00001,ko00002,ko01000 COG1294 Cytochrome bd-type quinol oxidase subunit 2
PDDFDHOE_00504 5.18e-22 - - - K - - - DNA-binding helix-turn-helix protein
PDDFDHOE_00506 4.39e-171 dcm 2.1.1.37 - H ko:K00558 ko00270,ko01100,ko05206,map00270,map01100,map05206 ko00000,ko00001,ko00002,ko01000,ko02048,ko03032,ko03036 Cytosine-specific methyltransferase
PDDFDHOE_00507 1.58e-242 - - - LT - - - Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
PDDFDHOE_00508 2.41e-96 glnL - - T ko:K07719 ko02020,map02020 ko00000,ko00001,ko00002,ko02022 Response regulator, receiver
PDDFDHOE_00510 2.31e-151 - - - L - - - Belongs to the 'phage' integrase family
PDDFDHOE_00511 8.01e-134 - - - L - - - site-specific recombinase, phage integrase family
PDDFDHOE_00512 1.71e-112 - - - L - - - Belongs to the 'phage' integrase family
PDDFDHOE_00513 1.61e-224 - - - U - - - Psort location CytoplasmicMembrane, score
PDDFDHOE_00514 5.69e-299 - - - U - - - Relaxase mobilization nuclease domain protein
PDDFDHOE_00515 6.34e-94 - - - - - - - -
PDDFDHOE_00516 5.35e-179 - - - D - - - COG NOG26689 non supervised orthologous group
PDDFDHOE_00517 7.32e-95 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_00518 5e-78 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_00519 2.02e-163 - - - S - - - Conjugal transfer protein traD
PDDFDHOE_00520 2.18e-63 - - - S - - - Conjugative transposon protein TraE
PDDFDHOE_00521 7.4e-71 - - - S - - - Conjugative transposon protein TraF
PDDFDHOE_00522 0.0 - - - U - - - conjugation system ATPase
PDDFDHOE_00523 9.01e-263 - - - S - - - Protein of unknown function (DUF1016)
PDDFDHOE_00524 0.0 - - - S - - - Purple acid Phosphatase, N-terminal domain
PDDFDHOE_00525 1.16e-286 - - - S - - - protein conserved in bacteria
PDDFDHOE_00526 3.42e-129 - - - H ko:K06950 - ko00000 Psort location Cytoplasmic, score 8.96
PDDFDHOE_00527 0.0 - - - M - - - Psort location OuterMembrane, score 9.49
PDDFDHOE_00528 2.98e-135 - - - T - - - cyclic nucleotide binding
PDDFDHOE_00531 0.0 - - - G - - - alpha-galactosidase
PDDFDHOE_00532 3.61e-315 - - - S - - - tetratricopeptide repeat
PDDFDHOE_00533 6.55e-224 - - - P ko:K02040 ko02010,ko02020,ko05152,map02010,map02020,map05152 ko00000,ko00001,ko00002,ko02000 COG0226 ABC-type phosphate transport system, periplasmic component
PDDFDHOE_00534 6.56e-184 tonB2 - - U ko:K03832 - ko00000,ko02000 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
PDDFDHOE_00535 1.96e-145 exbD2 - - U - - - Biopolymer transport protein ExbD/TolR
PDDFDHOE_00536 1.57e-134 exbD1 - - U - - - Biopolymer transport protein ExbD/TolR
PDDFDHOE_00537 5.35e-176 exbB - - U ko:K03561 - ko00000,ko02000 MotA TolQ ExbB proton channel family
PDDFDHOE_00538 6.49e-94 - - - - - - - -
PDDFDHOE_00539 3.25e-44 - - - S - - - Winged helix-turn-helix domain (DUF2582)
PDDFDHOE_00540 3.61e-209 - - - K ko:K13652 - ko00000,ko03000 methylphosphotriester-DNA alkyltransferase (AraC XylS family)
PDDFDHOE_00541 1.54e-84 - - - S ko:K06996 - ko00000 Glyoxalase-like domain
PDDFDHOE_00542 5.12e-159 - - - K - - - Helix-turn-helix domain
PDDFDHOE_00543 5.21e-195 - - - S - - - COG NOG27239 non supervised orthologous group
PDDFDHOE_00545 5.27e-236 - - - L - - - Domain of unknown function (DUF1848)
PDDFDHOE_00546 3.14e-181 - 1.1.1.159, 1.3.1.25 - IQ ko:K00076,ko:K05783 ko00121,ko00362,ko00364,ko00622,ko01100,ko01120,ko01220,map00121,map00362,map00364,map00622,map01100,map01120,map01220 br01602,ko00000,ko00001,ko00002,ko01000 Oxidoreductase, short chain dehydrogenase reductase family protein
PDDFDHOE_00547 2.81e-37 - - - - - - - -
PDDFDHOE_00548 9.95e-289 pncB 6.3.4.21 - F ko:K00763 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko01000 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
PDDFDHOE_00550 1.14e-142 - - - - - - - -
PDDFDHOE_00551 0.0 - - - G - - - Domain of unknown function (DUF5127)
PDDFDHOE_00552 1.36e-255 - - - M - - - O-antigen ligase like membrane protein
PDDFDHOE_00553 7.6e-44 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_00554 2.83e-34 - - - - - - - -
PDDFDHOE_00557 0.0 - - - M - - - COG3209 Rhs family protein
PDDFDHOE_00558 0.0 pcrA 3.6.4.12 - L ko:K03657 ko03420,ko03430,map03420,map03430 ko00000,ko00001,ko01000,ko03400 DNA helicase
PDDFDHOE_00559 2.86e-122 - - - M - - - Psort location CytoplasmicMembrane, score 9.46
PDDFDHOE_00560 2e-252 - - - S - - - TolB-like 6-blade propeller-like
PDDFDHOE_00561 2.57e-272 - - - S - - - ATPase (AAA superfamily)
PDDFDHOE_00567 2.51e-65 - - - KT - - - AAA domain
PDDFDHOE_00568 1.26e-291 - - - M - - - Phosphate-selective porin O and P
PDDFDHOE_00569 5.99e-244 ansB 3.5.1.1 - EJ ko:K01424 ko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110 ko00000,ko00001,ko01000 Belongs to the asparaginase 1 family
PDDFDHOE_00570 7.19e-283 dcuB - - S ko:K07791,ko:K07792 ko02020,map02020 ko00000,ko00001,ko02000 Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_00571 0.0 aspA 4.3.1.1 - E ko:K01744 ko00250,ko01100,map00250,map01100 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score 9.97
PDDFDHOE_00572 4.56e-244 - - - S - - - SMI1-KNR4 cell-wall
PDDFDHOE_00573 1.59e-136 - - - M - - - COG NOG27749 non supervised orthologous group
PDDFDHOE_00574 0.0 priA - - L ko:K04066 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
PDDFDHOE_00575 0.0 - - - G - - - Domain of unknown function (DUF4091)
PDDFDHOE_00576 4.49e-112 ptpA 3.1.3.48 - T ko:K01104 - ko00000,ko01000 Belongs to the low molecular weight phosphotyrosine protein phosphatase family
PDDFDHOE_00577 0.0 - - - S ko:K07037 - ko00000 7TM receptor with intracellular HD hydrolase
PDDFDHOE_00578 0.0 gltX 6.1.1.17 - J ko:K01885 ko00860,ko00970,ko01100,ko01110,ko01120,map00860,map00970,map01100,map01110,map01120 ko00000,ko00001,ko00002,ko01000,ko01007,ko02048,ko03016 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
PDDFDHOE_00579 6.96e-305 waaA 2.4.99.12, 2.4.99.13, 2.4.99.14, 2.4.99.15 GT30 M ko:K02527 ko00540,ko01100,map00540,map01100 ko00000,ko00001,ko00002,ko01000,ko01003,ko01005 Psort location Cytoplasmic, score 8.96
PDDFDHOE_00580 1.46e-95 dapH - - S - - - Bacterial transferase hexapeptide repeat protein
PDDFDHOE_00581 0.0 - 3.4.11.9 - E ko:K01262 - ko00000,ko01000,ko01002 COG0006 Xaa-Pro aminopeptidase
PDDFDHOE_00582 6.01e-33 rpsU - - J ko:K02970 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bS21 family
PDDFDHOE_00583 3.83e-199 xerC - - D ko:K03733 - ko00000,ko03036 Belongs to the 'phage' integrase family. XerC subfamily
PDDFDHOE_00584 3.07e-58 raiA - - J ko:K05808 - ko00000,ko03009 Ribosomal subunit interface protein
PDDFDHOE_00589 3.77e-291 tuf - - J ko:K02358 - ko00000,ko03012,ko03029,ko04147 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
PDDFDHOE_00591 1.04e-37 secE - - U ko:K03073 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
PDDFDHOE_00592 2.04e-122 nusG - - K ko:K02601 - ko00000,ko03009,ko03021 Participates in transcription elongation, termination and antitermination
PDDFDHOE_00593 7.31e-100 rplK - - J ko:K02867 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
PDDFDHOE_00594 8.31e-159 rplA - - J ko:K02863 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
PDDFDHOE_00595 4.02e-116 rplJ - - J ko:K02864 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal protein L10
PDDFDHOE_00596 1.78e-71 rplL - - J ko:K02935 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
PDDFDHOE_00597 0.0 rpoB 2.7.7.6 - K ko:K03043 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PDDFDHOE_00598 0.0 rpoC 2.7.7.6 - K ko:K03046 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PDDFDHOE_00599 6.63e-63 - - - T - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_00600 4.76e-87 rpsL - - J ko:K02950 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
PDDFDHOE_00601 1.89e-105 rpsG - - J ko:K02992 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
PDDFDHOE_00602 0.0 fusA - - J ko:K02355 - ko00000,ko03012,ko03029 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
PDDFDHOE_00603 6.63e-63 rpsJ - - J ko:K02946 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Involved in the binding of tRNA to the ribosomes
PDDFDHOE_00604 3.88e-146 rplC - - J ko:K02906 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
PDDFDHOE_00605 6.14e-140 rplD - - J ko:K02926 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms part of the polypeptide exit tunnel
PDDFDHOE_00606 1.55e-61 rplW - - J ko:K02892 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
PDDFDHOE_00607 5.46e-194 rplB - - J ko:K02886 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
PDDFDHOE_00608 5.19e-59 rpsS - - J ko:K02965 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
PDDFDHOE_00609 2.53e-88 rplV - - J ko:K02890 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
PDDFDHOE_00610 3.11e-164 rpsC - - J ko:K02982 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
PDDFDHOE_00611 9.31e-97 rplP - - J ko:K02878 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
PDDFDHOE_00612 1.75e-35 rpmC - - J ko:K02904 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the universal ribosomal protein uL29 family
PDDFDHOE_00613 1.13e-52 rpsQ - - J ko:K02961 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
PDDFDHOE_00614 3.37e-79 rplN - - J ko:K02874 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
PDDFDHOE_00615 2.35e-67 rplX - - J ko:K02895 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
PDDFDHOE_00616 8.57e-122 rplE - - J ko:K02931 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
PDDFDHOE_00617 2.73e-61 rpsN - - J ko:K02954 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PDDFDHOE_00618 1.74e-88 rpsH - - J ko:K02994 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
PDDFDHOE_00619 5.81e-131 rplF - - J ko:K02933 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
PDDFDHOE_00620 4.05e-70 rplR - - J ko:K02881 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
PDDFDHOE_00621 1.29e-112 rpsE - - J ko:K02988 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
PDDFDHOE_00622 2.9e-31 rpmD - - J ko:K02907 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 50S ribosomal protein L30
PDDFDHOE_00623 3.46e-94 rplO - - J ko:K02876 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 binds to the 23S rRNA
PDDFDHOE_00624 2.69e-311 secY - - U ko:K03076 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
PDDFDHOE_00625 1.91e-194 map 3.4.11.18 - E ko:K01265 - ko00000,ko01000,ko01002 Psort location Cytoplasmic, score
PDDFDHOE_00626 1.98e-44 infA - - J ko:K02518 - ko00000,ko03012 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
PDDFDHOE_00627 1.06e-18 rpmJ - - J ko:K02919 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL36 family
PDDFDHOE_00628 1.77e-81 rpsM - - J ko:K02952 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
PDDFDHOE_00629 7.13e-87 rpsK - - J ko:K02948 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
PDDFDHOE_00630 2.53e-140 rpsD - - J ko:K02986 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
PDDFDHOE_00631 6.88e-232 rpoA 2.7.7.6 - K ko:K03040 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PDDFDHOE_00632 8.85e-102 rplQ - - J ko:K02879 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal protein L17
PDDFDHOE_00633 3e-89 - - - S - - - COG NOG31702 non supervised orthologous group
PDDFDHOE_00634 3.52e-118 - - - S - - - COG NOG27987 non supervised orthologous group
PDDFDHOE_00635 0.0 mutS_2 - - L - - - DNA mismatch repair protein MutS
PDDFDHOE_00636 1.06e-156 - - - S - - - COG NOG29571 non supervised orthologous group
PDDFDHOE_00637 0.0 hutU 4.2.1.49 - H ko:K01712 ko00340,ko01100,map00340,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
PDDFDHOE_00638 1.08e-213 ftcD 2.1.2.5, 4.3.1.4 - E ko:K00603,ko:K13990 ko00340,ko00670,ko01100,map00340,map00670,map01100 ko00000,ko00001,ko01000,ko03036,ko04147 Glutamate formiminotransferase
PDDFDHOE_00639 1.1e-284 hutI 3.5.2.7 - F ko:K01468 ko00340,ko01100,map00340,map01100 ko00000,ko00001,ko00002,ko01000 Imidazolone-5-propionate hydrolase
PDDFDHOE_00640 1.04e-36 - - - K - - - COG NOG16818 non supervised orthologous group
PDDFDHOE_00641 1.7e-146 - 3.4.13.21 - E ko:K05995 - ko00000,ko01000,ko01002 Peptidase family S51
PDDFDHOE_00642 1.92e-212 - - - K - - - helix_turn_helix, Deoxyribose operon repressor
PDDFDHOE_00643 5.21e-41 - - - - - - - -
PDDFDHOE_00644 1.15e-90 - - - - - - - -
PDDFDHOE_00645 3.26e-74 - - - S - - - Helix-turn-helix domain
PDDFDHOE_00646 2.82e-149 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_00647 6.87e-204 - - - U - - - Relaxase mobilization nuclease domain protein
PDDFDHOE_00648 6.39e-80 - - - S - - - Bacterial mobilisation protein (MobC)
PDDFDHOE_00649 6.16e-235 - - - L - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_00650 3.22e-246 - - - T - - - COG NOG25714 non supervised orthologous group
PDDFDHOE_00651 1.5e-54 - - - K - - - Helix-turn-helix domain
PDDFDHOE_00652 8.21e-134 - - - - - - - -
PDDFDHOE_00653 4.4e-232 - - - L - - - Belongs to the 'phage' integrase family
PDDFDHOE_00654 6.82e-133 fchA - - E - - - COG3404 Methenyl tetrahydrofolate cyclohydrolase
PDDFDHOE_00655 0.0 hutH 4.3.1.3 - E ko:K01745 ko00340,ko01100,map00340,map01100 ko00000,ko00001,ko00002,ko01000 Histidine ammonia-lyase
PDDFDHOE_00656 2.49e-145 - - - K - - - transcriptional regulator, TetR family
PDDFDHOE_00657 1.04e-304 - - - MU - - - Psort location OuterMembrane, score
PDDFDHOE_00658 4.17e-237 - - - M ko:K03585 ko01501,ko01503,map01501,map01503 ko00000,ko00001,ko00002,ko01504,ko02000,ko03036 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PDDFDHOE_00659 0.0 czcA - - V ko:K03296 - ko00000 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PDDFDHOE_00660 3.76e-67 - - - E - - - COG NOG19114 non supervised orthologous group
PDDFDHOE_00661 0.0 - - - E - - - COG COG2755 Lysophospholipase L1 and related esterases
PDDFDHOE_00662 7.51e-211 - - - E - - - COG NOG14456 non supervised orthologous group
PDDFDHOE_00663 0.0 algI - - M - - - Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_00664 0.0 - 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 2 family
PDDFDHOE_00665 1.86e-243 gpr - - C ko:K19265 - ko00000,ko01000 Oxidoreductase, aldo keto reductase family protein
PDDFDHOE_00667 3.25e-112 - - - - - - - -
PDDFDHOE_00668 1.58e-152 - - - S - - - Outer membrane protein beta-barrel domain
PDDFDHOE_00669 9.04e-172 - - - - - - - -
PDDFDHOE_00670 0.0 - - - N - - - nuclear chromosome segregation
PDDFDHOE_00671 5.93e-261 - - - M - - - COG2885 Outer membrane protein and related peptidoglycan-associated
PDDFDHOE_00672 0.0 rng - - J ko:K08301 - ko00000,ko01000,ko03009,ko03019 S1 RNA binding domain
PDDFDHOE_00673 1.66e-56 hupA - - L ko:K03530 - ko00000,ko03032,ko03036,ko03400 Belongs to the bacterial histone-like protein family
PDDFDHOE_00674 9.65e-257 mutY - - L ko:K03575 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 COG1194 A G-specific DNA glycosylase
PDDFDHOE_00675 5.1e-222 - - - L - - - Belongs to the 'phage' integrase family
PDDFDHOE_00676 1.94e-173 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_00677 7.54e-244 - - - M - - - COG2885 Outer membrane protein and related peptidoglycan-associated
PDDFDHOE_00678 0.0 - - - N - - - bacterial-type flagellum assembly
PDDFDHOE_00679 9.78e-275 - 4.1.1.44 - S ko:K01607 ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220 ko00000,ko00001,ko01000 Cupin domain
PDDFDHOE_00680 9.89e-213 - - - C - - - Flavodoxin
PDDFDHOE_00681 1.26e-216 - - - K - - - transcriptional regulator (AraC family)
PDDFDHOE_00682 3.72e-277 patB 4.4.1.8 - E ko:K14155 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 ko00000,ko00001,ko01000,ko01007 COG COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities
PDDFDHOE_00683 6.72e-137 - - - M - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_00684 6e-244 - - - S ko:K06889 - ko00000 COG COG1073 Hydrolases of the alpha beta superfamily
PDDFDHOE_00685 3.96e-25 - - - - - - - -
PDDFDHOE_00688 1.68e-203 - - - U - - - Type IV secretory system Conjugative DNA transfer
PDDFDHOE_00689 8e-252 - - - U - - - Relaxase mobilization nuclease domain protein
PDDFDHOE_00690 2.82e-86 - - - - - - - -
PDDFDHOE_00691 9.35e-174 - - - D - - - NUBPL iron-transfer P-loop NTPase
PDDFDHOE_00692 7.45e-87 - - - S - - - Protein of unknown function (DUF3408)
PDDFDHOE_00693 1.77e-168 - - - S - - - Domain of unknown function (DUF4122)
PDDFDHOE_00694 6.87e-47 - - - - - - - -
PDDFDHOE_00695 3.02e-20 - - - S - - - Psort location CytoplasmicMembrane, score
PDDFDHOE_00696 4.02e-108 - - - K - - - COG NOG19120 non supervised orthologous group
PDDFDHOE_00697 1.42e-76 - - - S - - - UpxZ family of transcription anti-terminator antagonists
PDDFDHOE_00698 0.0 kpsD - - M - - - COG1596 Periplasmic protein involved in polysaccharide export
PDDFDHOE_00699 6.03e-202 - - - M - - - Chain length determinant protein
PDDFDHOE_00700 7.21e-303 - - - S - - - Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_00701 0.0 - - - S - - - COG NOG34047 non supervised orthologous group
PDDFDHOE_00702 0.0 - - - M - - - COG NOG23378 non supervised orthologous group
PDDFDHOE_00703 3.01e-142 - - - M - - - Protein of unknown function (DUF3575)
PDDFDHOE_00704 0.0 - - - - - - - -
PDDFDHOE_00705 8.02e-228 - - - L - - - Belongs to the 'phage' integrase family
PDDFDHOE_00706 4e-76 rplS - - J ko:K02884 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
PDDFDHOE_00707 9.98e-134 - - - - - - - -
PDDFDHOE_00708 1.49e-106 - - - K ko:K03088 - ko00000,ko03021 Sigma-70, region 4
PDDFDHOE_00709 2.05e-231 glk 2.7.1.2 - GK ko:K00845 ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score 9.26
PDDFDHOE_00710 9.38e-168 - - - V ko:K02003 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
PDDFDHOE_00711 5.6e-98 ssb - - L ko:K03111 ko03030,ko03430,ko03440,map03030,map03430,map03440 ko00000,ko00001,ko03029,ko03032,ko03400 Single-stranded DNA-binding protein
PDDFDHOE_00712 1.8e-306 gldE - - S - - - Gliding motility-associated protein GldE
PDDFDHOE_00713 7.99e-142 sfp - - H - - - Belongs to the P-Pant transferase superfamily
PDDFDHOE_00714 2.98e-49 - - - S - - - Divergent 4Fe-4S mono-cluster
PDDFDHOE_00715 5.68e-68 - - - S ko:K06975 - ko00000 GCN5-related N-acetyl-transferase
PDDFDHOE_00716 0.0 tnaA 4.1.99.1 - E ko:K01667 ko00380,map00380 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score 8.96
PDDFDHOE_00717 2.99e-74 - - - S - - - Domain of unknown function (DUF4465)
PDDFDHOE_00718 0.0 - - - S - - - COG NOG23380 non supervised orthologous group
PDDFDHOE_00719 0.0 - - - H - - - COG4206 Outer membrane cobalamin receptor protein
PDDFDHOE_00720 6.79e-203 - - - S - - - Cell surface protein
PDDFDHOE_00721 0.0 - - - T - - - Domain of unknown function (DUF5074)
PDDFDHOE_00722 0.0 - - - T - - - Domain of unknown function (DUF5074)
PDDFDHOE_00723 1.61e-225 - - - CO - - - COG NOG24939 non supervised orthologous group
PDDFDHOE_00724 0.0 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_00725 0.0 - 2.7.13.3 - T ko:K02484,ko:K07636 ko02020,map02020 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 ATPase histidine kinase DNA gyrase B HSP90 domain protein
PDDFDHOE_00726 2.21e-157 srrA - - K ko:K07657,ko:K07658 ko02020,map02020 ko00000,ko00001,ko00002,ko02022 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PDDFDHOE_00727 3.68e-280 - - - T - - - COG NOG06399 non supervised orthologous group
PDDFDHOE_00728 2.62e-198 - - - S - - - COG NOG25193 non supervised orthologous group
PDDFDHOE_00729 0.0 yfmR - - S ko:K15738 - ko00000,ko02000 ABC transporter, ATP-binding protein
PDDFDHOE_00730 9.25e-214 - 3.1.3.15 - E ko:K04486 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score 8.96
PDDFDHOE_00731 7.19e-300 - - - G - - - COG2407 L-fucose isomerase and related
PDDFDHOE_00732 2.89e-293 aspC 2.6.1.1, 2.6.1.2, 2.6.1.66 - E ko:K00812,ko:K14260 ko00220,ko00250,ko00270,ko00290,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00290,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko01000,ko01007 Aminotransferase, class I II
PDDFDHOE_00733 3.2e-284 lolE_1 - - M ko:K09808 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 COG4591 ABC-type transport system, involved in lipoprotein release, permease component
PDDFDHOE_00734 0.0 - - - F - - - Belongs to the D-alanine--D-alanine ligase family
PDDFDHOE_00735 9.53e-107 - - - K - - - This enzyme acetylates the N-terminal alanine of ribosomal protein S18
PDDFDHOE_00736 8.48e-286 - - - M - - - Glycosyltransferase, group 2 family protein
PDDFDHOE_00737 4.63e-231 - - - S - - - Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_00738 1.09e-292 - - - T - - - COG5000 Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation
PDDFDHOE_00739 0.0 - - - T - - - COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains
PDDFDHOE_00740 1.45e-285 - - - MU ko:K12340 ko01501,ko01503,ko02020,ko03070,ko04626,ko05133,map01501,map01503,map02020,map03070,map04626,map05133 ko00000,ko00001,ko00002,ko01504,ko02000,ko02044 outer membrane efflux protein
PDDFDHOE_00741 1.34e-265 - - - M ko:K02005 - ko00000 Efflux transporter, RND family, MFP subunit
PDDFDHOE_00742 1.23e-163 - - - V ko:K02003 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
PDDFDHOE_00743 0.0 - - - V ko:K02004 - ko00000,ko00002,ko02000 ABC transporter, permease protein
PDDFDHOE_00744 2.85e-07 - - - - - - - -
PDDFDHOE_00745 3.44e-114 - - - E - - - Acetyltransferase (GNAT) domain
PDDFDHOE_00746 2.61e-133 - 2.3.1.18, 2.3.1.79 - S ko:K00633,ko:K00661 - ko00000,ko01000 Psort location Cytoplasmic, score
PDDFDHOE_00747 4.06e-107 - - - S - - - Psort location CytoplasmicMembrane, score 9.46
PDDFDHOE_00748 1.47e-72 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_00749 0.0 - - - P - - - Carboxypeptidase regulatory-like domain
PDDFDHOE_00750 1.78e-220 - - - T - - - Histidine kinase
PDDFDHOE_00751 3.99e-257 ypdA_4 - - T - - - Histidine kinase
PDDFDHOE_00752 1.31e-164 - - - K - - - COG3279 Response regulator of the LytR AlgR family
PDDFDHOE_00753 5.1e-109 trxA2 - - O - - - Psort location Cytoplasmic, score 9.26
PDDFDHOE_00754 0.0 rtcB_2 6.5.1.3 - S ko:K14415 - ko00000,ko01000,ko03016 tRNA-splicing ligase RtcB
PDDFDHOE_00755 8.81e-148 prfH - - J ko:K02839 - ko00000,ko03012 RF-1 domain
PDDFDHOE_00756 0.0 lctP - - C ko:K03303 - ko00000,ko02000 L-lactate permease
PDDFDHOE_00757 0.0 - - - M - - - COG NOG23378 non supervised orthologous group
PDDFDHOE_00758 8.57e-145 - - - M - - - non supervised orthologous group
PDDFDHOE_00759 0.0 - 2.1.3.15, 6.4.1.3 - I ko:K01966 ko00280,ko00630,ko00640,ko01100,ko01120,ko01130,ko01200,map00280,map00630,map00640,map01100,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 COG COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta)
PDDFDHOE_00760 0.0 - 6.3.4.14, 6.4.1.2, 6.4.1.3 - I ko:K01961,ko:K01965 ko00061,ko00280,ko00620,ko00630,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00280,map00620,map00630,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212 ko00000,ko00001,ko00002,ko01000 Biotin carboxylase
PDDFDHOE_00761 1.02e-119 - 6.4.1.1 - I ko:K01960 ko00020,ko00620,ko00720,ko01100,ko01120,ko01200,ko01230,map00020,map00620,map00720,map01100,map01120,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Biotin carboxyl carrier protein
PDDFDHOE_00762 0.0 - - - T - - - Psort location CytoplasmicMembrane, score 7.88
PDDFDHOE_00763 2.94e-155 bioD 6.3.3.3 - H ko:K01935 ko00780,ko01100,map00780,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
PDDFDHOE_00764 1.29e-190 bioC 2.1.1.197, 3.1.1.85 - H ko:K02169,ko:K09789 ko00780,ko01100,map00780,map01100 ko00000,ko00001,ko00002,ko01000 Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl- L-methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway
PDDFDHOE_00765 2.61e-160 - 3.1.1.85 - S ko:K09789 ko00780,ko01100,map00780,map01100 ko00000,ko00001,ko00002,ko01000 Protein of unknown function (DUF452)
PDDFDHOE_00766 1.5e-276 bioF 2.3.1.29, 2.3.1.47 - H ko:K00639,ko:K00652 ko00260,ko00780,ko01100,map00260,map00780,map01100 ko00000,ko00001,ko00002,ko01000,ko01007 COG COG0156 7-keto-8-aminopelargonate synthetase and related enzymes
PDDFDHOE_00767 0.0 bioA 2.6.1.62 - H ko:K00833 ko00780,ko01100,map00780,map01100 ko00000,ko00001,ko00002,ko01000,ko01007 the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a
PDDFDHOE_00768 6.01e-269 - - - N - - - Psort location OuterMembrane, score
PDDFDHOE_00769 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PDDFDHOE_00770 0.0 - - - E ko:K21572 - ko00000,ko02000 COG NOG25454 non supervised orthologous group
PDDFDHOE_00771 4.43e-270 fsr - - G ko:K08223 - ko00000,ko02000 Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_00772 2.01e-266 glxK 2.7.1.165 - G ko:K00865 ko00260,ko00561,ko00630,ko01100,ko01120,ko01130,map00260,map00561,map00630,map01100,map01120,map01130 ko00000,ko00001,ko01000 Belongs to the glycerate kinase type-1 family
PDDFDHOE_00773 1.3e-26 - - - S - - - Transglycosylase associated protein
PDDFDHOE_00774 5.01e-44 - - - - - - - -
PDDFDHOE_00775 3.42e-246 - - - K ko:K02529 - ko00000,ko03000 Psort location Cytoplasmic, score
PDDFDHOE_00776 3.54e-188 uxuB - - IQ - - - Oxidoreductase, short chain dehydrogenase reductase family protein
PDDFDHOE_00777 4.73e-287 uxuA 4.2.1.8 - H ko:K01686 ko00040,ko01100,map00040,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the dehydration of D-mannonate
PDDFDHOE_00778 2.22e-135 - 2.7.7.7 - L ko:K02342 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 COG0847 DNA polymerase III epsilon subunit and related 3'-5'
PDDFDHOE_00779 2.94e-197 - - - K - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_00780 1.02e-97 - - - S - - - Pyridoxamine 5'-phosphate oxidase like
PDDFDHOE_00781 4.22e-59 ycnE - - S - - - Antibiotic biosynthesis monooxygenase
PDDFDHOE_00782 5.91e-196 - - - S - - - RteC protein
PDDFDHOE_00783 9.18e-122 - - - S - - - Protein of unknown function (DUF1062)
PDDFDHOE_00784 3.38e-158 - - - S ko:K09807 - ko00000 Protein of unknown function (DUF541)
PDDFDHOE_00785 4.88e-140 - - - L - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_00786 3.36e-20 - - - H - - - COG NOG08812 non supervised orthologous group
PDDFDHOE_00787 1.47e-209 - - - L - - - Belongs to the 'phage' integrase family
PDDFDHOE_00788 4.17e-262 - - - M - - - COG2885 Outer membrane protein and related peptidoglycan-associated
PDDFDHOE_00789 0.0 - - - S - - - Domain of unknown function
PDDFDHOE_00792 0.0 - - - G - - - Belongs to the glycosyl hydrolase 2 family
PDDFDHOE_00793 0.0 - - - N - - - bacterial-type flagellum assembly
PDDFDHOE_00794 9.66e-115 - - - - - - - -
PDDFDHOE_00795 9.49e-262 - - - M - - - COG2885 Outer membrane protein and related peptidoglycan-associated
PDDFDHOE_00796 1.04e-29 - - - - - - - -
PDDFDHOE_00797 5.51e-118 - - - - - - - -
PDDFDHOE_00798 6.7e-16 - - - - - - - -
PDDFDHOE_00799 1.94e-94 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_00800 1.29e-46 - - - - - - - -
PDDFDHOE_00801 8.76e-32 - - - S - - - Protein of unknown function (DUF1273)
PDDFDHOE_00802 8.84e-235 - - - S - - - PcfJ-like protein
PDDFDHOE_00803 3.53e-34 - - - S - - - PcfK-like protein
PDDFDHOE_00804 0.0 - - - C - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_00805 2.1e-99 - - - - - - - -
PDDFDHOE_00806 5.82e-221 rluD 5.4.99.23 - J ko:K06180 - ko00000,ko01000,ko03009 Responsible for synthesis of pseudouridine from uracil
PDDFDHOE_00807 0.0 rumA 2.1.1.190 - H ko:K03215 - ko00000,ko01000,ko03009 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PDDFDHOE_00808 0.0 - - - M - - - Domain of unknown function
PDDFDHOE_00809 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PDDFDHOE_00810 0.0 - - - S ko:K21572 - ko00000,ko02000 Starch-binding associating with outer membrane
PDDFDHOE_00811 0.0 - - - M ko:K19519 - ko00000,ko04516 Domain of unknown function (DUF5108)
PDDFDHOE_00812 0.0 - - - M - - - COG2335, Secreted and surface protein containing fasciclin-like repeats
PDDFDHOE_00813 0.0 - - - P - - - TonB dependent receptor
PDDFDHOE_00814 0.0 - - - S ko:K21572 - ko00000,ko02000 PFAM SusD family
PDDFDHOE_00815 0.0 - - - P - - - TonB-dependent Receptor Plug Domain
PDDFDHOE_00816 0.0 - - - S - - - Domain of unknonw function from B. Theta Gene description (DUF3874)
PDDFDHOE_00817 4.22e-137 - - - L - - - DNA-binding protein
PDDFDHOE_00818 0.0 - - - G - - - Glycosyl hydrolases family 35
PDDFDHOE_00819 0.0 - - - G - - - beta-fructofuranosidase activity
PDDFDHOE_00820 4.66e-140 - - - E - - - GDSL-like Lipase/Acylhydrolase
PDDFDHOE_00821 4.66e-301 - 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 2 family
PDDFDHOE_00822 1.58e-192 - - - G - - - Belongs to the glycosyl hydrolase 28 family
PDDFDHOE_00823 9.1e-171 - - - E - - - GDSL-like Lipase/Acylhydrolase family
PDDFDHOE_00824 0.0 - - - G - - - alpha-galactosidase
PDDFDHOE_00825 0.0 - - - G - - - beta-galactosidase
PDDFDHOE_00826 6.98e-272 - - - G - - - beta-galactosidase
PDDFDHOE_00827 0.0 - 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 2 family
PDDFDHOE_00828 3.97e-176 - 4.2.2.23 PL11 S ko:K18197 - ko00000,ko01000 candidate rhamnogalacturonan lyase, polysaccharide lyase family 11 protein K01238
PDDFDHOE_00829 0.0 - - - G - - - Belongs to the glycosyl hydrolase 28 family
PDDFDHOE_00830 4.19e-238 - - - G - - - CBM9 module, glycoside hydrolase family 8 protein and carbohydrate esterase family 4 protein K01238
PDDFDHOE_00831 0.0 - - - G - - - Belongs to the glycosyl hydrolase 28 family
PDDFDHOE_00832 0.0 - 3.2.1.23 - G ko:K12308 ko00052,map00052 ko00000,ko00001,ko01000 Beta-galactosidase trimerisation domain
PDDFDHOE_00834 0.0 - - - G - - - Belongs to the glycosyl hydrolase 2 family
PDDFDHOE_00835 1.27e-308 - - - E - - - GDSL-like Lipase/Acylhydrolase family
PDDFDHOE_00836 0.0 - - - G - - - Belongs to the glycosyl hydrolase 28 family
PDDFDHOE_00837 2.35e-138 - - - G - - - Domain of unknown function (DUF4450)
PDDFDHOE_00838 0.0 - - - M - - - Right handed beta helix region
PDDFDHOE_00839 0.0 - - - G - - - Glycosyl hydrolase family 2, sugar binding domain protein
PDDFDHOE_00840 3.57e-166 - - - C - - - Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
PDDFDHOE_00841 9.01e-278 - - - K ko:K13652 - ko00000,ko03000 Bacterial transcription activator, effector binding domain
PDDFDHOE_00843 0.0 topB 5.99.1.2 - L ko:K03169 - ko00000,ko01000,ko03032 COG0550 Topoisomerase IA
PDDFDHOE_00844 0.0 mutB 5.4.99.2 - I ko:K01847 ko00280,ko00630,ko00640,ko00720,ko01100,ko01120,ko01200,map00280,map00630,map00640,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score 8.96
PDDFDHOE_00845 0.0 mutA 5.4.99.2 - I ko:K01847 ko00280,ko00630,ko00640,ko00720,ko01100,ko01120,ko01200,map00280,map00630,map00640,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 methylmalonyl-CoA mutase small subunit
PDDFDHOE_00846 0.0 - - - P ko:K07085 - ko00000 Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_00847 6.68e-150 - - - F - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_00848 0.0 - - - H ko:K02014 - ko00000,ko02000 COG COG4206 Outer membrane cobalamin receptor protein
PDDFDHOE_00849 6.14e-259 - - - S - - - COG NOG25284 non supervised orthologous group
PDDFDHOE_00850 7.38e-135 - - - S - - - non supervised orthologous group
PDDFDHOE_00851 3.47e-35 - - - - - - - -
PDDFDHOE_00853 1.42e-267 - - - P ko:K02016 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 COG0614 ABC-type Fe3 -hydroxamate transport system, periplasmic component
PDDFDHOE_00854 7.09e-213 btuC - - P ko:K02015 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PDDFDHOE_00855 6.35e-177 - 3.6.3.34 - HP ko:K02013 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 COG1120 ABC-type cobalamin Fe3 -siderophores transport systems, ATPase components
PDDFDHOE_00856 1.63e-314 - - - V - - - COG0534 Na -driven multidrug efflux pump
PDDFDHOE_00857 4.62e-58 - - - T - - - Cyclic nucleotide-monophosphate binding domain
PDDFDHOE_00858 1.5e-176 yvoA - - K ko:K03710 - ko00000,ko03000 UbiC transcription regulator-associated domain protein
PDDFDHOE_00859 0.0 - - - G - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_00860 0.0 - - - G - - - Glycosyl hydrolase family 92
PDDFDHOE_00861 2.67e-271 - - - G - - - Transporter, major facilitator family protein
PDDFDHOE_00862 7.91e-48 - - - M - - - COG2885 Outer membrane protein and related peptidoglycan-associated
PDDFDHOE_00863 1.83e-149 - - - M - - - COG2885 Outer membrane protein and related peptidoglycan-associated
PDDFDHOE_00864 0.0 - - - N - - - bacterial-type flagellum assembly
PDDFDHOE_00865 6.15e-168 - - - L - - - Arm DNA-binding domain
PDDFDHOE_00867 5.28e-304 queA 2.4.99.17 - H ko:K07568 - ko00000,ko01000,ko03016 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
PDDFDHOE_00868 7.16e-132 idi - - I - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_00869 1.97e-129 bsaA 1.11.1.9 - O ko:K00432 ko00480,ko00590,ko04918,map00480,map00590,map04918 ko00000,ko00001,ko01000 Belongs to the glutathione peroxidase family
PDDFDHOE_00870 0.0 - - - O - - - FAD dependent oxidoreductase
PDDFDHOE_00871 1.89e-279 - - - S - - - Domain of unknown function (DUF5109)
PDDFDHOE_00873 1.02e-142 - - - S - - - Tetratricopeptide repeats
PDDFDHOE_00874 6.63e-241 - - - K ko:K02529 - ko00000,ko03000 Psort location Cytoplasmic, score 9.97
PDDFDHOE_00875 5.21e-226 fdh 1.1.1.122 - C ko:K00064 ko00051,ko00053,ko01100,ko01110,ko01120,map00051,map00053,map01100,map01110,map01120 ko00000,ko00001,ko00002,ko01000 Oxidoreductase, aldo keto reductase family protein
PDDFDHOE_00876 1.88e-222 - - - S ko:K07045 - ko00000 Psort location Cytoplasmic, score 8.96
PDDFDHOE_00877 2.73e-303 fucP - - G ko:K02429 - ko00000,ko02000 L-fucose H symporter permease
PDDFDHOE_00878 1.59e-241 yjmD_1 - - E - - - Psort location Cytoplasmic, score 9.97
PDDFDHOE_00879 1.84e-201 - - - G - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_00880 1.17e-267 - - - S - - - Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_00881 8.04e-292 - - - EGP ko:K08218 ko01501,map01501 ko00000,ko00001,ko00002,ko02000 Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_00882 0.0 lytB - - D ko:K06381 - ko00000 SpoIID LytB domain protein
PDDFDHOE_00883 0.0 - - - M - - - Glycosyltransferase, group 2 family protein
PDDFDHOE_00884 0.0 - - - E - - - Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
PDDFDHOE_00885 2.05e-295 - - - S - - - Lamin Tail Domain
PDDFDHOE_00886 2.2e-251 - - - S - - - Domain of unknown function (DUF4857)
PDDFDHOE_00887 2.8e-152 - - - - - - - -
PDDFDHOE_00888 2.66e-216 - - - V ko:K01990,ko:K19340 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 COG1131 ABC-type multidrug transport system ATPase component
PDDFDHOE_00889 4.42e-130 - - - S ko:K09939 - ko00000 Putative PepSY_TM-like
PDDFDHOE_00890 3.16e-122 - - - - - - - -
PDDFDHOE_00891 0.0 - - - S - - - Fibrobacter succinogenes major domain (Fib_succ_major)
PDDFDHOE_00892 0.0 - - - - - - - -
PDDFDHOE_00893 3.88e-304 - - - S - - - Protein of unknown function (DUF4876)
PDDFDHOE_00894 0.0 - - - P - - - COG NOG11715 non supervised orthologous group
PDDFDHOE_00895 3.45e-239 asd 1.2.1.11 - E ko:K00133 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
PDDFDHOE_00896 0.0 - - - H - - - COG NOG08812 non supervised orthologous group
PDDFDHOE_00897 0.0 - - - PT - - - Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_00898 1.56e-166 hypB - - H ko:K22132 - ko00000,ko03016 involved in molybdopterin and thiamine biosynthesis family 1
PDDFDHOE_00899 2.4e-151 lolD - - V ko:K09810 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner
PDDFDHOE_00900 1.42e-218 comEA - - L - - - COG COG1555 DNA uptake protein and related DNA-binding proteins
PDDFDHOE_00901 0.0 - - - P ko:K03308 - ko00000 Belongs to the sodium neurotransmitter symporter (SNF) (TC 2.A.22) family
PDDFDHOE_00902 1.09e-95 fjo27 - - S - - - Psort location CytoplasmicMembrane, score 9.46
PDDFDHOE_00903 0.0 murF 6.3.2.10 - M ko:K01929 ko00300,ko00550,ko01100,ko01502,map00300,map00550,map01100,map01502 ko00000,ko00001,ko01000,ko01011 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
PDDFDHOE_00904 0.0 - - - T - - - histidine kinase DNA gyrase B
PDDFDHOE_00905 1.58e-204 folP 2.5.1.15 - H ko:K00796 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score 8.96
PDDFDHOE_00906 5.55e-168 dacA - - S - - - Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
PDDFDHOE_00907 0.0 tldD1 - - S ko:K03568 - ko00000,ko01002 and their inactivated homologs
PDDFDHOE_00908 3.12e-315 tldD3 - - S ko:K03592 - ko00000,ko01002 Psort location Cytoplasmic, score 9.26
PDDFDHOE_00909 1.6e-122 - - - S ko:K03744 - ko00000 LemA family
PDDFDHOE_00910 2.2e-213 - - - S - - - Protein of unknown function (DUF3137)
PDDFDHOE_00911 4.53e-196 - - - S - - - Protein of unknown function (DUF1266)
PDDFDHOE_00912 2.56e-129 - - - - - - - -
PDDFDHOE_00913 0.0 - 3.2.1.23 - G ko:K12308 ko00052,map00052 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 35 family
PDDFDHOE_00914 8.5e-243 - - - G - - - Belongs to the glycosyl hydrolase 43 family
PDDFDHOE_00915 0.0 - - - G - - - Glycosyl hydrolases family 43
PDDFDHOE_00916 0.0 - - - G - - - Carbohydrate binding domain protein
PDDFDHOE_00917 0.0 - 3.2.1.177 GH31 G ko:K01811 - ko00000,ko01000 Belongs to the glycosyl hydrolase 31 family
PDDFDHOE_00918 0.0 - - - KT - - - Y_Y_Y domain
PDDFDHOE_00919 0.0 - - - G - - - COG NOG26813 non supervised orthologous group
PDDFDHOE_00920 0.0 - - - G - - - F5/8 type C domain
PDDFDHOE_00921 0.0 - 3.2.1.51 GH29 G ko:K01206 ko00511,map00511 ko00000,ko00001,ko01000,ko04147 Alpha-L-fucosidase
PDDFDHOE_00922 2.69e-82 - 5.1.3.32 - G ko:K03534 - ko00000,ko01000 Psort location Cytoplasmic, score 8.96
PDDFDHOE_00923 1.36e-184 - - - K - - - helix_turn_helix, arabinose operon control protein
PDDFDHOE_00924 0.0 - - - G - - - Glycosyl hydrolases family 43
PDDFDHOE_00925 0.0 - - - G - - - Glycosyl-hydrolase 97 C-terminal, oligomerisation
PDDFDHOE_00926 9.13e-202 - - - M - - - Domain of unknown function (DUF4488)
PDDFDHOE_00927 0.0 - - - S ko:K09955 - ko00000 protein conserved in bacteria
PDDFDHOE_00928 4.11e-255 - - - G - - - hydrolase, family 43
PDDFDHOE_00929 0.0 - - - N - - - BNR repeat-containing family member
PDDFDHOE_00930 0.0 - - - S - - - Uncharacterized protein conserved in bacteria (DUF2264)
PDDFDHOE_00931 0.0 - - - T - - - adenylate cyclase carring two-component hybrid sensor and regulator domains
PDDFDHOE_00932 2.44e-37 - - - M - - - Glycosyltransferase
PDDFDHOE_00933 1.95e-176 wecE 2.6.1.59 - E ko:K02805 - ko00000,ko01000,ko01007 COGs COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis
PDDFDHOE_00934 8.32e-187 rfbA 2.7.7.24 - H ko:K00973 ko00521,ko00523,ko00525,ko01130,map00521,map00523,map00525,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
PDDFDHOE_00935 2.83e-108 - - - K - - - COG NOG19120 non supervised orthologous group
PDDFDHOE_00936 1.12e-66 - - - S - - - UpxZ family of transcription anti-terminator antagonists
PDDFDHOE_00939 0.0 - - - U - - - conjugation system ATPase
PDDFDHOE_00940 0.0 - - - L - - - Integrase core domain
PDDFDHOE_00941 7.14e-182 - - - L - - - IstB-like ATP binding protein
PDDFDHOE_00943 1.05e-42 - - - P - - - Outer membrane protein beta-barrel family
PDDFDHOE_00945 0.0 - - - S - - - Tetratricopeptide repeat
PDDFDHOE_00946 6.29e-163 - - - S - - - serine threonine protein kinase
PDDFDHOE_00947 4.9e-138 - - - L - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_00948 2.62e-200 - - - K - - - AraC-like ligand binding domain
PDDFDHOE_00949 3.85e-108 - - - S - - - Psort location CytoplasmicMembrane, score
PDDFDHOE_00950 1.38e-71 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_00951 1.17e-71 trxA - - O ko:K03671 ko04621,ko05418,map04621,map05418 ko00000,ko00001,ko03110 Belongs to the thioredoxin family
PDDFDHOE_00952 0.0 dnaE 2.7.7.7 - L ko:K02337 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase III alpha subunit
PDDFDHOE_00953 5.68e-164 psd 4.1.1.65 - I ko:K01613 ko00564,ko01100,ko01110,map00564,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer)
PDDFDHOE_00954 1.33e-161 pssA 2.7.8.8 - I ko:K17103 ko00260,ko00564,ko01100,ko01110,map00260,map00564,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Belongs to the CDP-alcohol phosphatidyltransferase class-I family
PDDFDHOE_00955 7.84e-52 - - - S - - - Domain of unknown function (DUF4834)
PDDFDHOE_00956 3.1e-101 tadA 3.5.4.33 - FJ ko:K11991 - ko00000,ko01000,ko03016 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
PDDFDHOE_00957 6.13e-48 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_00958 2.56e-83 - - - L ko:K07460 - ko00000 Belongs to the UPF0102 family
PDDFDHOE_00959 1.9e-79 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_00960 6.16e-175 birA 6.3.4.15 - H ko:K03524 ko00780,ko01100,map00780,map01100 ko00000,ko00001,ko01000,ko03000 biotin acetyl-CoA-carboxylase ligase
PDDFDHOE_00961 0.0 - - - M - - - COG0793 Periplasmic protease
PDDFDHOE_00962 2.28e-149 - - - S - - - COG NOG28155 non supervised orthologous group
PDDFDHOE_00963 8.91e-306 dinF - - V ko:K03327 - ko00000,ko02000 MATE efflux family protein
PDDFDHOE_00964 1.23e-162 pyrH 2.7.4.22 - F ko:K09903 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko01000 Catalyzes the reversible phosphorylation of UMP to UDP
PDDFDHOE_00966 4e-258 - - - D - - - Tetratricopeptide repeat
PDDFDHOE_00968 0.0 - - - P - - - (belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
PDDFDHOE_00969 2.61e-64 - - - P - - - RyR domain
PDDFDHOE_00970 5.49e-169 - - - G - - - Major Facilitator
PDDFDHOE_00971 1.74e-178 - - - G - - - FGGY family of carbohydrate kinases, N-terminal domain
PDDFDHOE_00972 1.51e-231 - - - S - - - Protein of unknown function (DUF2961)
PDDFDHOE_00973 1.43e-261 - - - - - - - -
PDDFDHOE_00974 3.89e-10 - - - S - - - Domain of unknown function (DUF4361)
PDDFDHOE_00975 2.65e-176 - - - P ko:K21572 - ko00000,ko02000 non supervised orthologous group
PDDFDHOE_00976 0.0 - - - H - - - cobalamin-transporting ATPase activity
PDDFDHOE_00977 2.08e-84 - - - S - - - IPT/TIG domain
PDDFDHOE_00978 3.38e-243 - - - G - - - Glycosyl hydrolases family 32
PDDFDHOE_00979 6.28e-180 - - - K - - - Periplasmic binding protein-like domain
PDDFDHOE_00980 3.15e-187 - - - EG - - - Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_00981 6.51e-122 frr - - J ko:K02838 - ko00000,ko03012 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
PDDFDHOE_00982 7.4e-226 rsgA 3.1.3.100 - S ko:K06949 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko01000,ko03009 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
PDDFDHOE_00983 1.04e-154 - - - S - - - PKD-like family
PDDFDHOE_00984 2.11e-86 - - - S - - - Domain of unknown function (DUF4843)
PDDFDHOE_00985 4.69e-187 - - - S ko:K21572 - ko00000,ko02000 Starch-binding associating with outer membrane
PDDFDHOE_00986 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PDDFDHOE_00987 0.0 - - - N ko:K01992 - ko00000,ko00002,ko02000 ABC-2 family transporter protein
PDDFDHOE_00988 7.98e-224 - - - V ko:K01990 - ko00000,ko00002,ko02000 ATPases associated with a variety of cellular activities
PDDFDHOE_00989 0.0 - - - N ko:K01992 - ko00000,ko00002,ko02000 ABC-type uncharacterized transport system
PDDFDHOE_00990 1.05e-226 - - - V ko:K01990 - ko00000,ko00002,ko02000 ATPases associated with a variety of cellular activities
PDDFDHOE_00991 2.1e-248 - - - M ko:K03585 ko01501,ko01503,map01501,map01503 ko00000,ko00001,ko00002,ko01504,ko02000,ko03036 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PDDFDHOE_00992 0.0 bepE_4 - - V ko:K03296,ko:K18138 ko01501,ko01503,map01501,map01503 ko00000,ko00001,ko00002,ko01504,ko02000 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PDDFDHOE_00993 1.02e-311 tolC - - MU - - - Psort location OuterMembrane, score
PDDFDHOE_00994 1.43e-273 pelA 3.1.1.11 - G ko:K01051 ko00040,ko01100,map00040,map01100 ko00000,ko00001,ko00002,ko01000 pectate lyase
PDDFDHOE_00995 8.81e-286 - - - S - - - Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_00996 0.0 fumB 4.2.1.2 - C ko:K01676 ko00020,ko00620,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00620,map00720,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the reversible hydration of fumarate to (S)- malate
PDDFDHOE_00997 0.0 - - - JM - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_00998 5.5e-283 hflX - - S ko:K03665 - ko00000,ko03009 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
PDDFDHOE_00999 0.0 - - - H - - - Susd and RagB outer membrane lipoprotein
PDDFDHOE_01000 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PDDFDHOE_01001 7.91e-120 - - - S - - - Lipid-binding putative hydrolase
PDDFDHOE_01002 2.51e-168 - - - S - - - Domain of unknown function (DUF5012)
PDDFDHOE_01003 0.0 - - - H - - - Susd and RagB outer membrane lipoprotein
PDDFDHOE_01004 0.0 - - - P - - - Psort location OuterMembrane, score
PDDFDHOE_01005 1.45e-280 - - - L - - - Belongs to the 'phage' integrase family
PDDFDHOE_01006 0.0 - - - L - - - Transposase IS66 family
PDDFDHOE_01007 4.9e-68 - - - L ko:K07484 - ko00000 PFAM IS66 Orf2 like protein
PDDFDHOE_01008 8.52e-83 - - - L ko:K07497 - ko00000 transposase activity
PDDFDHOE_01009 0.0 - 2.7.7.49 - L ko:K00986 - ko00000,ko01000 N-terminal domain of reverse transcriptase
PDDFDHOE_01010 0.0 - - - L - - - Type II intron maturase
PDDFDHOE_01011 0.0 - 2.7.7.49 - L ko:K00986 - ko00000,ko01000 Reverse transcriptase (RNA-dependent DNA polymerase)
PDDFDHOE_01012 0.0 - - - G - - - Belongs to the glycosyl hydrolase 2 family
PDDFDHOE_01013 0.0 - - - E - - - GDSL-like Lipase/Acylhydrolase family
PDDFDHOE_01014 0.0 - 3.2.1.40 - G ko:K05989 - ko00000,ko01000 Bacterial alpha-L-rhamnosidase C-terminal domain
PDDFDHOE_01015 8.21e-212 xynZ - - S - - - Esterase
PDDFDHOE_01016 2.23e-171 - - - E - - - GDSL-like Lipase/Acylhydrolase
PDDFDHOE_01017 0.0 - - - - - - - -
PDDFDHOE_01018 0.0 - - - S - - - NHL repeat
PDDFDHOE_01019 0.0 - - - P - - - TonB dependent receptor
PDDFDHOE_01020 0.0 - - - P - - - SusD family
PDDFDHOE_01021 3.8e-251 - - - S - - - Pfam:DUF5002
PDDFDHOE_01022 0.0 - - - S - - - Domain of unknown function (DUF5005)
PDDFDHOE_01023 0.0 - - - F ko:K21572 - ko00000,ko02000 SusD family
PDDFDHOE_01024 3.6e-106 - - - S - - - Domain of unknown function (DUF5004)
PDDFDHOE_01025 6.89e-258 - - - S - - - Domain of unknown function (DUF4961)
PDDFDHOE_01026 0.0 - - - P - - - TonB-dependent Receptor Plug Domain
PDDFDHOE_01027 0.0 - - - F ko:K21572 - ko00000,ko02000 SusD family
PDDFDHOE_01028 0.0 - - - H - - - CarboxypepD_reg-like domain
PDDFDHOE_01029 0.0 - 3.1.1.53 - G ko:K05970 - ko00000,ko01000 Glycosyl hydrolase family 2, sugar binding domain protein
PDDFDHOE_01030 0.0 - - - G - - - Glycosyl hydrolase family 92
PDDFDHOE_01031 0.0 - - - G - - - Glycosyl hydrolase family 92
PDDFDHOE_01032 1.65e-290 - 3.2.1.197 - G ko:K21065 - ko00000,ko01000 beta-1,4-mannooligosaccharide phosphorylase
PDDFDHOE_01033 0.0 - - - G - - - Glycosyl hydrolases family 43
PDDFDHOE_01034 0.0 - - - E - - - GDSL-like Lipase/Acylhydrolase
PDDFDHOE_01035 0.0 trkH - - P ko:K03498 - ko00000,ko02000 Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_01036 0.0 trkA - - C ko:K03499 - ko00000,ko02000 COG0569 K transport systems NAD-binding component
PDDFDHOE_01037 0.0 dxs 2.2.1.7 - H ko:K01662 ko00730,ko00900,ko01100,ko01110,ko01130,map00730,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
PDDFDHOE_01038 7.24e-243 - - - L - - - Phage integrase SAM-like domain
PDDFDHOE_01039 2.09e-262 - - - L - - - Arm DNA-binding domain
PDDFDHOE_01040 1.6e-60 - - - S - - - Helix-turn-helix domain
PDDFDHOE_01041 3.23e-59 - - - K - - - MerR HTH family regulatory protein
PDDFDHOE_01042 4.92e-65 - - - S - - - Helix-turn-helix domain
PDDFDHOE_01043 4.54e-67 - - - - - - - -
PDDFDHOE_01044 9.94e-254 - - - T ko:K07713 ko02020,map02020 ko00000,ko00001,ko00002,ko02022 Bacterial regulatory protein, Fis family
PDDFDHOE_01045 0.0 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
PDDFDHOE_01046 2.41e-126 aqpZ - - G ko:K06188 - ko00000,ko02000 Belongs to the MIP aquaporin (TC 1.A.8) family
PDDFDHOE_01047 1.15e-23 - - - - - - - -
PDDFDHOE_01048 2.62e-100 - - - S - - - Domain of unknown function (DUF4906)
PDDFDHOE_01050 7.13e-97 - - - S - - - COG NOG32009 non supervised orthologous group
PDDFDHOE_01052 5.97e-173 - - - M - - - COG NOG23378 non supervised orthologous group
PDDFDHOE_01053 3.73e-108 - - - M - - - Protein of unknown function (DUF3575)
PDDFDHOE_01054 2.42e-247 - - - L - - - COG COG3385 FOG Transposase and inactivated derivatives
PDDFDHOE_01055 1.94e-25 - - - U - - - Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_01056 1.65e-142 - - - L - - - Phage integrase SAM-like domain
PDDFDHOE_01057 4.47e-183 - - - T ko:K07713 ko02020,map02020 ko00000,ko00001,ko00002,ko02022 Sigma-54 interaction domain protein
PDDFDHOE_01058 5.28e-246 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
PDDFDHOE_01060 3.81e-198 - - - L - - - COG COG3344 Retron-type reverse transcriptase
PDDFDHOE_01062 1.47e-54 - - - S - - - 23S rRNA-intervening sequence protein
PDDFDHOE_01063 2.94e-205 - - - S - - - Fimbrillin-like
PDDFDHOE_01064 2.79e-144 - - - U - - - Protein of unknown function DUF262
PDDFDHOE_01065 8.05e-181 - - - - - - - -
PDDFDHOE_01066 1.62e-143 - - - M - - - Protein of unknown function (DUF3575)
PDDFDHOE_01068 6.74e-173 - - - H - - - ThiF family
PDDFDHOE_01069 5.47e-144 - - - S - - - Prokaryotic E2 family D
PDDFDHOE_01070 3e-180 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_01071 4e-40 - - - S - - - Prokaryotic Ubiquitin
PDDFDHOE_01072 2.9e-94 - - - S - - - PRTRC system protein E
PDDFDHOE_01073 1.17e-136 - - - K - - - KOW (Kyprides, Ouzounis, Woese) motif.
PDDFDHOE_01074 1.17e-136 - - - K - - - KOW (Kyprides, Ouzounis, Woese) motif.
PDDFDHOE_01075 2.82e-172 comF 2.4.2.14 - S ko:K00764 ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000,ko01002 ComF family
PDDFDHOE_01076 9.07e-199 suhB 3.1.3.25 - G ko:K01092 ko00521,ko00562,ko01100,ko04070,map00521,map00562,map01100,map04070 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score
PDDFDHOE_01077 6.18e-237 - - - PT - - - COG3712 Fe2 -dicitrate sensor, membrane component
PDDFDHOE_01078 0.0 - - - P - - - Secretin and TonB N terminus short domain
PDDFDHOE_01079 0.0 - - - J ko:K21572 - ko00000,ko02000 Pfam:SusD
PDDFDHOE_01080 0.0 - - - C - - - PKD domain
PDDFDHOE_01081 1.62e-219 - 3.1.4.46 - C ko:K01126 ko00564,map00564 ko00000,ko00001,ko01000 COG0584 Glycerophosphoryl diester phosphodiesterase
PDDFDHOE_01082 0.0 - - - G ko:K07783 ko02020,map02020 ko00000,ko00001,ko02000 Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_01083 7.44e-17 - - - - - - - -
PDDFDHOE_01084 4.44e-51 - - - - - - - -
PDDFDHOE_01085 1.39e-61 - - - S - - - Toxin-antitoxin system, toxin component, RelE family
PDDFDHOE_01086 3.03e-52 - - - K - - - Helix-turn-helix
PDDFDHOE_01087 1.18e-06 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_01088 1.33e-73 - - - S - - - Phage derived protein Gp49-like (DUF891)
PDDFDHOE_01089 1.9e-62 - - - K - - - Helix-turn-helix
PDDFDHOE_01090 0.0 - - - S - - - Virulence-associated protein E
PDDFDHOE_01091 5.12e-42 - - - S - - - Domain of unknown function (DUF4248)
PDDFDHOE_01092 1.12e-90 - - - L - - - DNA-binding protein
PDDFDHOE_01093 1.76e-24 - - - - - - - -
PDDFDHOE_01094 4.55e-113 - 3.5.1.28 - V ko:K01447 - ko00000,ko01000 N-acetylmuramoyl-L-alanine amidase
PDDFDHOE_01095 6.39e-177 pflA 1.97.1.4 - C ko:K04069 - ko00000,ko01000 Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PDDFDHOE_01096 0.0 pflB 2.3.1.54 - C ko:K00656 ko00620,ko00640,ko00650,ko01100,ko01120,map00620,map00640,map00650,map01100,map01120 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score 9.97
PDDFDHOE_01099 4.25e-249 fabH 2.3.1.180 - I ko:K00648 ko00061,ko01100,ko01212,map00061,map01100,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
PDDFDHOE_01100 1.82e-112 hndA 1.12.1.3 - C ko:K18330 - ko00000,ko01000 COG COG1905 NADH ubiquinone oxidoreductase 24 kD subunit
PDDFDHOE_01101 0.0 hndD 1.12.1.3, 1.17.1.9 - C ko:K00123,ko:K18332 ko00630,ko00680,ko01100,ko01120,ko01200,map00630,map00680,map01100,map01120,map01200 ko00000,ko00001,ko01000 COG COG4624 Iron only hydrogenase large subunit, C-terminal domain
PDDFDHOE_01102 0.0 nuoF 1.12.1.3, 1.6.5.3 - C ko:K00335,ko:K18331 ko00190,ko01100,map00190,map01100 ko00000,ko00001,ko00002,ko01000 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
PDDFDHOE_01103 0.0 - - - S - - - Heparinase II/III-like protein
PDDFDHOE_01104 0.0 - - - G - - - Belongs to the glycosyl hydrolase 28 family
PDDFDHOE_01105 6.4e-80 - - - - - - - -
PDDFDHOE_01106 3.65e-294 uxuA 4.2.1.8 - H ko:K01686 ko00040,ko01100,map00040,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the dehydration of D-mannonate
PDDFDHOE_01107 3.98e-190 uxuB_1 - - IQ - - - Oxidoreductase, short chain dehydrogenase reductase family protein
PDDFDHOE_01108 0.0 - 3.2.1.20 GH31 G ko:K01187 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 Glycosyl-hydrolase 97 C-terminal, oligomerisation
PDDFDHOE_01109 3.99e-193 murQ 4.2.1.126 - H ko:K07106 ko00520,ko01100,map00520,map01100 ko00000,ko00001,ko01000 Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
PDDFDHOE_01110 2.6e-88 - - - S - - - Protein of unknown function (DUF3037)
PDDFDHOE_01111 2.07e-191 - - - DT - - - aminotransferase class I and II
PDDFDHOE_01112 0.0 - - - S - - - Serine hydrolase involved in the detoxification of formaldehyde
PDDFDHOE_01113 0.0 - - - D ko:K09955 - ko00000 protein conserved in bacteria
PDDFDHOE_01114 0.0 - - - KT - - - Two component regulator propeller
PDDFDHOE_01115 1.35e-118 - - - K ko:K03088 - ko00000,ko03021 Belongs to the sigma-70 factor family. ECF subfamily
PDDFDHOE_01117 0.0 - - - H - - - TonB-linked outer membrane protein, SusC RagA family
PDDFDHOE_01118 0.0 - - - S ko:K21572 - ko00000,ko02000 COG NOG28394 non supervised orthologous group
PDDFDHOE_01119 0.0 - - - N - - - Bacterial group 2 Ig-like protein
PDDFDHOE_01120 0.0 - - - S - - - COG NOG07966 non supervised orthologous group
PDDFDHOE_01121 0.0 xynBA - - G - - - Belongs to the glycosyl hydrolase 43 family
PDDFDHOE_01122 1.72e-309 - 3.2.1.180 GH88 S ko:K18581 - ko00000,ko01000 Glycosyl Hydrolase Family 88
PDDFDHOE_01123 8.15e-99 - - - MP ko:K06079 ko01503,map01503 ko00000,ko00001 COG NOG29769 non supervised orthologous group
PDDFDHOE_01124 6.07e-292 corC_1 - - P ko:K03699 - ko00000,ko02042 Psort location CytoplasmicMembrane, score
PDDFDHOE_01126 2.39e-179 loiP - - M ko:K07387 - ko00000,ko01000,ko01002 COG0501 Zn-dependent protease with chaperone function
PDDFDHOE_01127 0.0 - - - P - - - Psort location OuterMembrane, score
PDDFDHOE_01128 7.37e-103 - - - S - - - COG NOG29214 non supervised orthologous group
PDDFDHOE_01129 1.46e-197 - 3.1.2.12 CE1 S ko:K01070 ko00680,ko01120,ko01200,map00680,map01120,map01200 ko00000,ko00001,ko01000 esterase
PDDFDHOE_01130 9.54e-208 - - - S - - - COG NOG30864 non supervised orthologous group
PDDFDHOE_01131 0.0 - - - M - - - peptidase S41
PDDFDHOE_01132 1.07e-266 trmU 2.8.1.13 - J ko:K00566 ko04122,map04122 ko00000,ko00001,ko01000,ko03016 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
PDDFDHOE_01133 2.69e-149 narL - - K - - - COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
PDDFDHOE_01134 8.01e-105 - - - S - - - COG NOG27363 non supervised orthologous group
PDDFDHOE_01135 0.0 nhaC - - C ko:K03315 - ko00000,ko02000 Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_01136 1.21e-189 - - - S - - - VIT family
PDDFDHOE_01137 4.11e-100 - - - S - - - Psort location CytoplasmicMembrane, score 9.46
PDDFDHOE_01138 5.45e-278 ynfM - - EGP ko:K08224 - ko00000,ko02000 Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_01139 0.0 pbpC 2.4.1.129 GT51 M ko:K05367 ko00550,map00550 ko00000,ko00001,ko01000,ko01003,ko01011 COG4953 Membrane carboxypeptidase penicillin-binding protein PbpC
PDDFDHOE_01140 0.0 - - - S ko:K06894 - ko00000 COG2373 Large extracellular alpha-helical protein
PDDFDHOE_01141 1.6e-94 mip 5.2.1.8 - O ko:K01802 - ko00000,ko01000 COG COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1
PDDFDHOE_01142 5.84e-129 - - - CO - - - Redoxin
PDDFDHOE_01143 0.0 - - - G - - - IPT/TIG domain
PDDFDHOE_01144 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PDDFDHOE_01145 0.0 - - - P - - - SusD family
PDDFDHOE_01146 5.83e-252 - - - S - - - Domain of unknown function (DUF4361)
PDDFDHOE_01147 2.54e-87 paaI - - Q ko:K02614 ko00360,map00360 ko00000,ko00001,ko01000 phenylacetic acid degradation protein
PDDFDHOE_01148 4.88e-196 - - - NU - - - Protein of unknown function (DUF3108)
PDDFDHOE_01149 0.0 - - - S - - - COG NOG07965 non supervised orthologous group
PDDFDHOE_01150 0.0 lacZ 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 COG3250 Beta-galactosidase beta-glucuronidase
PDDFDHOE_01151 6.64e-247 mtrC - - M ko:K03585 ko01501,ko01503,map01501,map01503 ko00000,ko00001,ko00002,ko01504,ko02000,ko03036 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PDDFDHOE_01152 0.0 mexF - - V ko:K03296 - ko00000 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PDDFDHOE_01153 1.68e-296 - - - MU - - - Efflux transporter, outer membrane factor lipoprotein, NodT family
PDDFDHOE_01154 9.03e-115 lpxA2 2.3.1.129 - M ko:K00677 ko00540,ko01100,ko01503,map00540,map01100,map01503 ko00000,ko00001,ko00002,ko01000,ko01005 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
PDDFDHOE_01155 1.71e-162 - - - T - - - Carbohydrate-binding family 9
PDDFDHOE_01156 0.0 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
PDDFDHOE_01157 0.0 - - - P - - - COG COG3119 Arylsulfatase A and related enzymes
PDDFDHOE_01158 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PDDFDHOE_01159 0.0 - - - GM ko:K21572 - ko00000,ko02000 SusD family
PDDFDHOE_01160 3.15e-257 - - - S - - - Domain of unknown function (DUF5017)
PDDFDHOE_01161 3.22e-246 - - - S - - - COG NOG38840 non supervised orthologous group
PDDFDHOE_01162 0.0 - - - M - - - Domain of unknown function (DUF4955)
PDDFDHOE_01163 9.03e-229 dus - - H - - - Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PDDFDHOE_01164 6.57e-307 - - - - - - - -
PDDFDHOE_01165 0.0 chonabc 4.2.2.20, 4.2.2.21 - N ko:K08961 - ko00000,ko01000 Chondroitin sulfate ABC lyase
PDDFDHOE_01166 3.95e-122 - - - S - - - COG NOG28211 non supervised orthologous group
PDDFDHOE_01167 0.0 - - - CO - - - COG NOG24773 non supervised orthologous group
PDDFDHOE_01168 0.0 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_01169 6.38e-183 dapB 1.17.1.8 - E ko:K00215 ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the DapB family
PDDFDHOE_01170 0.0 lepB 3.4.21.89 - U ko:K03100 ko02024,ko03060,map02024,map03060 ko00000,ko00001,ko01000,ko01002 signal peptidase i
PDDFDHOE_01171 5.67e-231 lepB_1 3.4.21.89 - U ko:K03100 ko02024,ko03060,map02024,map03060 ko00000,ko00001,ko01000,ko01002 Belongs to the peptidase S26 family
PDDFDHOE_01172 1.16e-149 - - - C - - - WbqC-like protein
PDDFDHOE_01174 0.0 - - - V ko:K06147 - ko00000,ko02000 hmm pf03412
PDDFDHOE_01175 3.39e-125 - - - V ko:K02022 - ko00000 HlyD family secretion protein
PDDFDHOE_01176 2.1e-46 - - - KT - - - Lanthionine synthetase C-like protein
PDDFDHOE_01177 1.85e-125 - - - M - - - Glycosyl transferases group 1
PDDFDHOE_01179 1.56e-51 - - - S - - - 6-bladed beta-propeller
PDDFDHOE_01180 6.09e-137 - - - C ko:K06871 - ko00000 radical SAM domain protein
PDDFDHOE_01181 1.84e-54 - - - S - - - radical SAM domain protein
PDDFDHOE_01182 1.16e-236 - - - M - - - Glycosyl transferase family 2
PDDFDHOE_01183 2.85e-10 - - - KT - - - Lanthionine synthetase C-like protein
PDDFDHOE_01184 1.16e-79 - - - M - - - Glycosyltransferase sugar-binding region containing DXD motif
PDDFDHOE_01185 1.58e-108 - - - M - - - Glycosyltransferase sugar-binding region containing DXD motif
PDDFDHOE_01186 8.87e-187 glf 5.4.99.9 - M ko:K01854 ko00052,ko00520,map00052,map00520 ko00000,ko00001,ko01000 UDP-galactopyranose mutase
PDDFDHOE_01187 0.0 bglB 3.2.1.21 GH3 G ko:K05349 ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 3 family
PDDFDHOE_01188 0.0 - - - S - - - Domain of unknown function (DUF5121)
PDDFDHOE_01189 0.0 - 3.2.1.45 GH30 G ko:K01201 ko00511,ko00600,ko01100,ko04142,map00511,map00600,map01100,map04142 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 30 family
PDDFDHOE_01190 0.0 - - - S ko:K21572 - ko00000,ko02000 SusD family
PDDFDHOE_01191 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PDDFDHOE_01192 0.0 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_01193 7.72e-297 - - - S - - - Belongs to the peptidase M16 family
PDDFDHOE_01194 4.92e-109 - 3.2.2.10 - S ko:K06966 ko00230,ko00240,map00230,map00240 ko00000,ko00001,ko01000 Belongs to the LOG family
PDDFDHOE_01195 9.89e-138 kdsD 5.3.1.13 - M ko:K06041 ko00540,ko01100,map00540,map01100 ko00000,ko00001,ko00002,ko01000,ko01005 sugar phosphate isomerase involved in capsule formation
PDDFDHOE_01196 7.39e-225 - 2.7.1.4 - G ko:K00847 ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100 ko00000,ko00001,ko01000 COG COG0524 Sugar kinases, ribokinase family
PDDFDHOE_01197 9.05e-257 - 3.1.3.48 - T ko:K01104 - ko00000,ko01000 Tyrosine phosphatase family
PDDFDHOE_01199 0.0 - 3.6.4.13 - L ko:K05592 ko03018,map03018 ko00000,ko00001,ko01000,ko03009,ko03019 Belongs to the DEAD box helicase family
PDDFDHOE_01200 0.0 - - - T - - - Response regulator receiver domain protein
PDDFDHOE_01201 1.94e-241 - - - G - - - Glycosyl hydrolase
PDDFDHOE_01202 0.0 - 3.2.1.20 GH31 G ko:K01187 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 COG COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases
PDDFDHOE_01203 0.0 - - - G - - - IPT/TIG domain
PDDFDHOE_01204 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PDDFDHOE_01205 0.0 - - - P ko:K21572 - ko00000,ko02000 Pfam:SusD
PDDFDHOE_01206 1.92e-240 - - - S - - - Domain of unknown function (DUF4361)
PDDFDHOE_01207 0.0 - - - G - - - Glycosyl hydrolase family 76
PDDFDHOE_01208 0.0 - - - G - - - Glycosyl hydrolase family 92
PDDFDHOE_01209 0.0 - 3.2.1.20 GH31 M ko:K01187 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 COG NOG06228 non supervised orthologous group
PDDFDHOE_01210 0.0 - 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 beta-galactosidase
PDDFDHOE_01211 2.86e-187 - - - EG - - - Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_01212 0.0 - - - E - - - COG NOG04781 non supervised orthologous group
PDDFDHOE_01213 6.95e-300 - - - S - - - Psort location CytoplasmicMembrane, score
PDDFDHOE_01214 0.0 cap - - S - - - COG2244 Membrane protein involved in the export of O-antigen and teichoic acid
PDDFDHOE_01215 1.84e-187 - - - S - - - Phospholipase/Carboxylesterase
PDDFDHOE_01216 4.71e-242 ruvB 3.6.4.12 - L ko:K03551 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
PDDFDHOE_01217 2.92e-278 spmA - - S ko:K06373 - ko00000 Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_01218 5.5e-97 ybeY - - S - - - Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
PDDFDHOE_01219 0.0 - - - O - - - non supervised orthologous group
PDDFDHOE_01220 9.82e-176 - - - - - - - -
PDDFDHOE_01221 0.0 - - - S ko:K21572 - ko00000,ko02000 SusD family
PDDFDHOE_01222 0.0 - - - P - - - Secretin and TonB N terminus short domain
PDDFDHOE_01223 1.33e-275 - - - PT - - - Sigma factor regulatory protein, FecR PupR family
PDDFDHOE_01224 8.04e-129 - - - K ko:K03088 - ko00000,ko03021 Sigma-70, region 4
PDDFDHOE_01225 0.0 - - - O - - - Domain of unknown function (DUF5118)
PDDFDHOE_01226 0.0 - - - O - - - COG NOG06109 non supervised orthologous group
PDDFDHOE_01227 0.0 - - - S - - - PKD-like family
PDDFDHOE_01228 8.74e-147 - - - S - - - Domain of unknown function (DUF4843)
PDDFDHOE_01229 0.0 - - - J ko:K21572 - ko00000,ko02000 Pfam:SusD
PDDFDHOE_01230 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PDDFDHOE_01231 2.39e-283 - - - PT - - - Domain of unknown function (DUF4974)
PDDFDHOE_01233 6.27e-131 - - - K ko:K03088 - ko00000,ko03021 RNA polymerase sigma-70 factor, ECF subfamily
PDDFDHOE_01234 0.0 gidA - - D ko:K03495 - ko00000,ko03016,ko03036 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
PDDFDHOE_01235 1.14e-121 apt 2.4.2.7 - F ko:K00759 ko00230,ko01100,map00230,map01100 ko00000,ko00001,ko01000,ko04147 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
PDDFDHOE_01236 0.0 uvrC - - L ko:K03703 ko03420,map03420 ko00000,ko00001,ko03400 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
PDDFDHOE_01237 6.98e-104 dtd - - J ko:K07560 - ko00000,ko01000,ko03016 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
PDDFDHOE_01238 7.63e-74 ypjD - - S - - - MazG nucleotide pyrophosphohydrolase domain
PDDFDHOE_01239 1.21e-210 deoC 4.1.2.4 - H ko:K01619 ko00030,map00030 ko00000,ko00001,ko01000 Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
PDDFDHOE_01240 1.24e-166 - - - S - - - Protein of unknown function (DUF1266)
PDDFDHOE_01241 3.12e-225 ispB 2.5.1.90 - H ko:K02523 ko00900,ko01110,map00900,map01110 ko00000,ko00001,ko01000,ko01006 Belongs to the FPP GGPP synthase family
PDDFDHOE_01242 0.0 polA 2.7.7.7 - L ko:K02335 ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440 ko00000,ko00001,ko01000,ko03032,ko03400 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
PDDFDHOE_01243 1.74e-88 - - - S - - - COG NOG29882 non supervised orthologous group
PDDFDHOE_01244 9.66e-176 - - - T ko:K02477 - ko00000,ko02022 COG3279 Response regulator of the LytR AlgR family
PDDFDHOE_01245 0.0 - - - T - - - Histidine kinase
PDDFDHOE_01246 6.78e-217 cysE 2.3.1.30 - E ko:K00640 ko00270,ko00920,ko01100,ko01110,ko01120,ko01200,ko01230,ko05111,map00270,map00920,map01100,map01110,map01120,map01200,map01230,map05111 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score 9.97
PDDFDHOE_01247 4.14e-299 rlmL - - L ko:K07444 - ko00000,ko01000 Belongs to the methyltransferase superfamily
PDDFDHOE_01248 0.0 pepX2 3.4.14.5 - E ko:K01278 ko04974,map04974 ko00000,ko00001,ko01000,ko01002,ko04090,ko04147 Peptidase, S9A B C family, catalytic domain protein
PDDFDHOE_01249 7.57e-304 purD 6.3.4.13 - F ko:K01945 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Belongs to the GARS family
PDDFDHOE_01250 4.66e-233 - - - S - - - Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_01251 1.38e-103 yqaA - - S - - - Psort location CytoplasmicMembrane, score 9.46
PDDFDHOE_01252 2.8e-170 mnmC - - S - - - Psort location Cytoplasmic, score
PDDFDHOE_01253 2.89e-222 mntA - - P ko:K09815,ko:K11707 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 COG0803 ABC-type metal ion transport system, periplasmic component surface adhesin
PDDFDHOE_01254 9.95e-187 znuC - - P ko:K09817 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ABC transporter, ATP-binding protein
PDDFDHOE_01255 0.0 - - - S - - - Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_01256 6e-154 pgdA_1 - - G - - - Psort location Cytoplasmic, score
PDDFDHOE_01257 9.27e-248 queG 1.17.99.6 - C ko:K18979 - ko00000,ko01000,ko03016 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
PDDFDHOE_01258 4.8e-251 - - - S - - - Putative binding domain, N-terminal
PDDFDHOE_01259 0.0 - - - S - - - Domain of unknown function (DUF4302)
PDDFDHOE_01260 2.49e-230 - - - S - - - Putative zinc-binding metallo-peptidase
PDDFDHOE_01261 0.0 - - - S ko:K21572 - ko00000,ko02000 COG NOG28139 non supervised orthologous group
PDDFDHOE_01262 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PDDFDHOE_01263 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PDDFDHOE_01264 0.0 - - - S ko:K21572 - ko00000,ko02000 COG NOG28139 non supervised orthologous group
PDDFDHOE_01265 4.76e-213 - - - S - - - Putative zinc-binding metallo-peptidase
PDDFDHOE_01266 5.97e-316 - - - S - - - Domain of unknown function (DUF4302)
PDDFDHOE_01267 5.56e-245 - - - S - - - Putative binding domain, N-terminal
PDDFDHOE_01268 5.44e-293 - - - - - - - -
PDDFDHOE_01269 4.91e-304 - 3.1.1.11 - G ko:K01051 ko00040,ko01100,map00040,map01100 ko00000,ko00001,ko00002,ko01000 COG NOG24911 non supervised orthologous group
PDDFDHOE_01270 1.06e-192 idnO 1.1.1.69 - IQ ko:K00046 - ko00000,ko01000 Oxidoreductase, short chain dehydrogenase reductase family protein
PDDFDHOE_01271 1.47e-210 kduI 5.3.1.17 - G ko:K01815 ko00040,map00040 ko00000,ko00001,ko01000 Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
PDDFDHOE_01274 1.93e-316 tyrS 6.1.1.1 - J ko:K01866 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
PDDFDHOE_01275 8.99e-157 - - - L ko:K03424 - ko00000,ko01000 Psort location Cytoplasmic, score 8.96
PDDFDHOE_01276 3.88e-64 yidD - - S ko:K08998 - ko00000 Could be involved in insertion of integral membrane proteins into the membrane
PDDFDHOE_01277 6.37e-67 rnpA 3.1.26.5 - J ko:K03536 - ko00000,ko01000,ko03016 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
PDDFDHOE_01278 1.97e-174 hemD 4.2.1.75 - H ko:K01719 ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120 ko00000,ko00001,ko00002,ko01000 Uroporphyrinogen-III synthase
PDDFDHOE_01279 3.51e-164 - - - S - - - Psort location CytoplasmicMembrane, score
PDDFDHOE_01280 2.44e-135 yvdD 3.2.2.10 - S ko:K06966 ko00230,ko00240,map00230,map00240 ko00000,ko00001,ko01000 Belongs to the LOG family
PDDFDHOE_01282 1.37e-221 - - - S - - - Domain of unknown function (DUF4848)
PDDFDHOE_01284 2.35e-245 - - - L - - - Belongs to the 'phage' integrase family
PDDFDHOE_01285 6.57e-161 - - - L - - - Integrase core domain
PDDFDHOE_01286 9.82e-84 - - - L ko:K07483 - ko00000 COG2963 Transposase and inactivated derivatives
PDDFDHOE_01287 0.0 - - - S - - - phospholipase Carboxylesterase
PDDFDHOE_01288 0.0 - - - EU - - - Peptidase, S9A B C family, catalytic domain protein
PDDFDHOE_01289 2.56e-290 hydF - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_01290 0.0 hydG 4.1.99.19 - C ko:K03150 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko01000 Iron-only hydrogenase maturation rSAM protein HydG
PDDFDHOE_01291 8.29e-252 hydE 2.8.1.6 - C ko:K01012 ko00780,ko01100,map00780,map01100 ko00000,ko00001,ko00002,ko01000 Iron-only hydrogenase maturation rSAM protein HydE
PDDFDHOE_01292 0.0 - - - C - - - 4Fe-4S binding domain protein
PDDFDHOE_01293 3.89e-22 - - - - - - - -
PDDFDHOE_01294 0.0 - 3.6.1.13 - L ko:K01515 ko00230,map00230 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score 8.96
PDDFDHOE_01295 4e-282 - 3.6.1.13 - L ko:K01515 ko00230,map00230 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score 8.96
PDDFDHOE_01296 2.2e-147 - - - S - - - L,D-transpeptidase catalytic domain
PDDFDHOE_01297 1.39e-256 - - - S - - - COG NOG25022 non supervised orthologous group
PDDFDHOE_01298 3.78e-57 groS - - O ko:K04078 - ko00000,ko03029,ko03110 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
PDDFDHOE_01299 0.0 groL - - O ko:K04077 ko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152 ko00000,ko00001,ko03019,ko03029,ko03110,ko04147 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
PDDFDHOE_01300 2.34e-115 - - - S - - - GDYXXLXY protein
PDDFDHOE_01301 3.99e-209 - - - S - - - Domain of unknown function (DUF4401)
PDDFDHOE_01302 3.94e-212 - - - S - - - Predicted membrane protein (DUF2157)
PDDFDHOE_01303 0.0 poxB 1.2.5.1, 2.2.1.6 - C ko:K00156,ko:K01652 ko00290,ko00620,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00620,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the TPP enzyme family
PDDFDHOE_01305 4.3e-48 - - - S - - - COG NOG33517 non supervised orthologous group
PDDFDHOE_01306 3.05e-90 - - - S - - - Psort location CytoplasmicMembrane, score 9.46
PDDFDHOE_01307 1.96e-121 - - - K ko:K03088 - ko00000,ko03021 Belongs to the sigma-70 factor family. ECF subfamily
PDDFDHOE_01308 6.98e-78 - - - - - - - -
PDDFDHOE_01309 1.37e-246 ltaE 4.1.2.48 - E ko:K01620 ko00260,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score 8.96
PDDFDHOE_01310 1.75e-298 - - - M - - - COG NOG06295 non supervised orthologous group
PDDFDHOE_01311 0.0 eptA - - S - - - lipid A phosphoethanolamine transferase, associated with polymyxin resistance
PDDFDHOE_01312 1.87e-181 dnaJ2 - - O ko:K03686,ko:K05516 - ko00000,ko03029,ko03036,ko03110 Psort location Cytoplasmic, score
PDDFDHOE_01313 3.55e-69 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_01314 4.15e-108 msrC 1.8.4.14 - T ko:K08968 ko00270,map00270 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score 8.96
PDDFDHOE_01315 0.0 - - - C - - - Domain of unknown function (DUF4132)
PDDFDHOE_01316 2.93e-93 - - - - - - - -
PDDFDHOE_01317 0.0 - 3.4.21.105 - S ko:K19225 - ko00000,ko01000,ko01002 Psort location CytoplasmicMembrane, score
PDDFDHOE_01318 0.0 acd - - C - - - Acyl-CoA dehydrogenase, C-terminal domain
PDDFDHOE_01319 1.08e-244 etfA - - C ko:K03522 - ko00000,ko04147 Psort location Cytoplasmic, score 8.96
PDDFDHOE_01320 4.9e-205 etfB - - C ko:K03521 - ko00000 COG2086 Electron transfer flavoprotein beta subunit
PDDFDHOE_01321 2.93e-165 - - - S - - - Psort location OuterMembrane, score 9.52
PDDFDHOE_01322 0.0 - - - T - - - His Kinase A (phosphoacceptor) domain
PDDFDHOE_01323 0.0 - - - T - - - COG0642 Signal transduction histidine kinase
PDDFDHOE_01324 0.0 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
PDDFDHOE_01325 0.0 - - - M ko:K02014 - ko00000,ko02000 Psort location OuterMembrane, score 10.00
PDDFDHOE_01326 0.0 - - - S - - - Domain of unknown function (DUF4925)
PDDFDHOE_01327 3.24e-205 - - - K - - - transcriptional regulator (AraC family)
PDDFDHOE_01328 1.21e-286 - - - T - - - Sensor histidine kinase
PDDFDHOE_01329 3.13e-168 - - - K - - - Response regulator receiver domain protein
PDDFDHOE_01330 4.79e-294 pepC 3.4.22.40 - E ko:K01372 - ko00000,ko01000,ko01002 Peptidase C1-like family
PDDFDHOE_01332 6.01e-67 - - - S - - - Domain of unknown function (DUF4907)
PDDFDHOE_01333 6.49e-272 nanM - - S - - - COG NOG23382 non supervised orthologous group
PDDFDHOE_01334 0.0 - - - S - - - COG NOG26034 non supervised orthologous group
PDDFDHOE_01335 9.13e-282 - - - I - - - COG NOG24984 non supervised orthologous group
PDDFDHOE_01336 6.67e-120 - - - S - - - COG NOG28134 non supervised orthologous group
PDDFDHOE_01337 0.0 nhaS3 - - P - - - Sodium/hydrogen exchanger family
PDDFDHOE_01338 8.15e-204 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_01339 0.0 - - - G - - - Belongs to the glycosyl hydrolase 43 family
PDDFDHOE_01340 0.0 - 3.2.1.21 GH3 G ko:K05349 ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110 ko00000,ko00001,ko01000 Psort location Periplasmic, score 9.44
PDDFDHOE_01341 1.15e-204 - - - G - - - CBM9 module, glycoside hydrolase family 8 protein and carbohydrate esterase family 4 protein K01238
PDDFDHOE_01342 0.0 - 3.1.1.53 - G ko:K05970 - ko00000,ko01000 Glycosyl hydrolase family 2, sugar binding domain protein
PDDFDHOE_01343 0.0 - - - G - - - Belongs to the glycosyl hydrolase 43 family
PDDFDHOE_01344 0.0 - - - G - - - Glycosyl hydrolases family 2, TIM barrel domain
PDDFDHOE_01345 0.0 - 3.2.1.21 GH3 G ko:K05349 ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110 ko00000,ko00001,ko01000 Psort location Periplasmic, score
PDDFDHOE_01346 0.0 - 3.2.1.51 GH95 G ko:K15923 ko00511,map00511 ko00000,ko00001,ko01000 Glycosyl hydrolase family 65, N-terminal domain
PDDFDHOE_01347 1.27e-182 plsC 2.3.1.51 - I ko:K00655 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko01004 Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family
PDDFDHOE_01348 3.02e-111 - - - CG - - - glycosyl
PDDFDHOE_01349 0.0 - - - S - - - COG NOG10142 non supervised orthologous group
PDDFDHOE_01350 1.59e-115 - - - K ko:K03088 - ko00000,ko03021 Belongs to the sigma-70 factor family. ECF subfamily
PDDFDHOE_01351 6.46e-83 - - - S - - - Uncharacterized protein conserved in bacteria (DUF2141)
PDDFDHOE_01352 0.0 - - - P - - - Outer membrane protein beta-barrel family
PDDFDHOE_01353 1.71e-131 - - - S - - - Psort location CytoplasmicMembrane, score
PDDFDHOE_01354 5.64e-59 marR - - K - - - Winged helix DNA-binding domain
PDDFDHOE_01356 5.39e-81 - - - - - - - -
PDDFDHOE_01357 3.8e-152 yhhQ - - S ko:K09125 - ko00000 Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
PDDFDHOE_01358 4.69e-161 queC 6.3.4.20 - F ko:K06920 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko01000,ko03016 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
PDDFDHOE_01359 1.46e-110 queF 1.7.1.13 - H ko:K09457 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko01000,ko03016 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
PDDFDHOE_01360 2.32e-146 - - - S ko:K06950 - ko00000 Psort location Cytoplasmic, score 8.96
PDDFDHOE_01361 4.56e-110 rlmH 2.1.1.177 - J ko:K00783 - ko00000,ko01000,ko03009 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
PDDFDHOE_01362 1.43e-82 - - - S - - - COG NOG32209 non supervised orthologous group
PDDFDHOE_01363 1.91e-198 nadC 2.4.2.19 - H ko:K00767 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the NadC ModD family
PDDFDHOE_01364 2.2e-123 - - - K ko:K03088 - ko00000,ko03021 Belongs to the sigma-70 factor family. ECF subfamily
PDDFDHOE_01365 3.7e-221 - - - K - - - COG NOG25837 non supervised orthologous group
PDDFDHOE_01366 1.18e-126 - - - S - - - COG NOG28799 non supervised orthologous group
PDDFDHOE_01368 2.74e-154 - - - S - - - COG NOG28261 non supervised orthologous group
PDDFDHOE_01369 4.97e-220 fabK 1.3.1.9 - C ko:K02371 ko00061,ko01100,ko01212,map00061,map01100,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 related to 2-nitropropane dioxygenase
PDDFDHOE_01370 9.14e-263 ald 1.4.1.1 - C ko:K00259 ko00250,ko00430,ko01100,map00250,map00430,map01100 ko00000,ko00001,ko01000 Belongs to the AlaDH PNT family
PDDFDHOE_01371 1.61e-208 - - - E ko:K21572 - ko00000,ko02000 SusD family
PDDFDHOE_01372 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PDDFDHOE_01373 0.0 - - - O - - - non supervised orthologous group
PDDFDHOE_01374 0.0 - - - M - - - Peptidase, M23 family
PDDFDHOE_01375 0.0 - - - M - - - Dipeptidase
PDDFDHOE_01376 0.0 pgcA 5.4.2.2 - G ko:K01835 ko00010,ko00030,ko00052,ko00230,ko00500,ko00520,ko00521,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00052,map00230,map00500,map00520,map00521,map01100,map01110,map01120,map01130 ko00000,ko00001,ko00002,ko01000 Phosphoglucomutase phosphomannomutase, alpha beta alpha domain II
PDDFDHOE_01377 8.43e-282 - - - S ko:K07148 - ko00000 Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_01378 1.28e-240 oatA - - I - - - Acyltransferase family
PDDFDHOE_01379 1.18e-138 - - - T - - - COG COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
PDDFDHOE_01380 7.83e-197 nudC 3.6.1.22 - L ko:K03426 ko00760,ko01100,ko04146,map00760,map01100,map04146 ko00000,ko00001,ko01000 COG COG2816 NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding
PDDFDHOE_01381 0.0 - - - S - - - COG COG0488 ATPase components of ABC transporters with duplicated ATPase domains
PDDFDHOE_01382 1.77e-108 - - - G - - - Glycosyl hydrolases family 2
PDDFDHOE_01383 0.0 - - - G - - - beta-galactosidase
PDDFDHOE_01384 0.0 - - - S - - - COG NOG06097 non supervised orthologous group
PDDFDHOE_01385 0.0 - - - T - - - Two component regulator propeller
PDDFDHOE_01386 0.0 merA - - C ko:K21739 - ko00000 COG COG1249 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes
PDDFDHOE_01387 2.35e-132 ykgB - - S - - - Psort location CytoplasmicMembrane, score 9.46
PDDFDHOE_01388 1.77e-197 - - - K - - - COG COG2207 AraC-type DNA-binding domain-containing proteins
PDDFDHOE_01389 7.97e-108 cdd 3.5.4.5 - F ko:K01489 ko00240,ko00983,ko01100,map00240,map00983,map01100 ko00000,ko00001,ko01000 This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis
PDDFDHOE_01390 1.38e-221 lytG - - MNU - - - COG1705 Muramidase (flagellum-specific)
PDDFDHOE_01391 0.0 ndh 1.6.99.3 - C ko:K03885 ko00190,map00190 ko00000,ko00001,ko01000 NADH dehydrogenase, FAD-containing subunit
PDDFDHOE_01392 2.14e-278 - - - M ko:K02005 - ko00000 Efflux transporter, RND family, MFP subunit
PDDFDHOE_01393 3.68e-152 ytrE_3 - - V ko:K02003 - ko00000,ko00002,ko02000 Psort location CytoplasmicMembrane, score 7.88
PDDFDHOE_01394 3.83e-118 - - - S - - - COG NOG30399 non supervised orthologous group
PDDFDHOE_01395 6.2e-301 - - - V ko:K02004 - ko00000,ko00002,ko02000 Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_01396 1.17e-308 - - - V ko:K02004 - ko00000,ko00002,ko02000 Psort location CytoplasmicMembrane, score
PDDFDHOE_01397 0.0 - - - T - - - Psort location CytoplasmicMembrane, score
PDDFDHOE_01398 0.0 - - - MU - - - Psort location OuterMembrane, score
PDDFDHOE_01399 4.63e-316 - - - T ko:K02481 - ko00000,ko02022 acetoacetate metabolism regulatory protein AtoC K07714
PDDFDHOE_01400 6.7e-301 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
PDDFDHOE_01401 0.0 - - - M - - - COG NOG06397 non supervised orthologous group
PDDFDHOE_01402 0.0 ino1 5.5.1.4 - I ko:K01858 ko00521,ko00562,ko01100,ko01130,map00521,map00562,map01100,map01130 ko00000,ko00001,ko01000 Inositol-3-phosphate synthase
PDDFDHOE_01403 2.79e-112 pgpA 3.1.3.27 - I ko:K01095 ko00564,ko01100,map00564,map01100 ko00000,ko00001,ko01000 Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_01404 1.7e-106 - - - S - - - Psort location CytoplasmicMembrane, score
PDDFDHOE_01405 1.19e-153 pgsA1 2.7.8.5 - I ko:K00995 ko00564,ko01100,map00564,map01100 ko00000,ko00001,ko01000 Belongs to the CDP-alcohol phosphatidyltransferase class-I family
PDDFDHOE_01406 6.83e-224 - - - I - - - Inositolphosphotransferase 1, involved in synthesis of mannose-(inositol-P)2-ceramide (M(IP)2C), which is the most abundant sphingolipid in cells, mutation confers resistance to the antifungals syringomycin E and DmAMP1 in some growth media
PDDFDHOE_01407 1.45e-216 - - - S - - - Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_01408 2.94e-48 - - - K - - - Fic/DOC family
PDDFDHOE_01409 2.09e-113 - 3.5.1.28 - V ko:K01447 - ko00000,ko01000 Psort location Cytoplasmic, score 8.96
PDDFDHOE_01410 9.07e-61 - - - - - - - -
PDDFDHOE_01411 2.55e-105 - - - L - - - DNA-binding protein
PDDFDHOE_01412 0.0 - 3.6.4.12 - L ko:K02314 ko03030,ko04112,map03030,map04112 ko00000,ko00001,ko01000,ko03032 Participates in initiation and elongation during chromosome replication
PDDFDHOE_01413 2.85e-115 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_01414 5.63e-40 - - - S - - - Domain of unknown function (DUF4248)
PDDFDHOE_01415 1.07e-221 - - - L - - - Belongs to the 'phage' integrase family
PDDFDHOE_01416 8.48e-303 - - - V ko:K02004 - ko00000,ko00002,ko02000 Efflux ABC transporter, permease protein
PDDFDHOE_01417 2.7e-296 macB_3 - - V ko:K02004 - ko00000,ko00002,ko02000 Efflux ABC transporter, permease protein
PDDFDHOE_01418 7.55e-245 - - - M ko:K02005 - ko00000 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PDDFDHOE_01419 2.87e-305 - - - MU ko:K12340 ko01501,ko01503,ko02020,ko03070,ko04626,ko05133,map01501,map01503,map02020,map03070,map04626,map05133 ko00000,ko00001,ko00002,ko01504,ko02000,ko02044 Psort location OuterMembrane, score 10.00
PDDFDHOE_01420 2.67e-251 msrA 1.8.4.11, 1.8.4.12 - O ko:K07304,ko:K12267 - ko00000,ko01000 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PDDFDHOE_01421 7.52e-121 - - - S - - - COG NOG29882 non supervised orthologous group
PDDFDHOE_01422 0.0 pbpF - - M - - - Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
PDDFDHOE_01423 1.69e-152 - - - S - - - COG NOG36047 non supervised orthologous group
PDDFDHOE_01424 1.46e-237 - - - J - - - Domain of unknown function (DUF4476)
PDDFDHOE_01425 6.64e-162 - - - J - - - Domain of unknown function (DUF4476)
PDDFDHOE_01426 3.32e-202 yitL - - S ko:K00243 - ko00000 Psort location Cytoplasmic, score 8.96
PDDFDHOE_01427 7.56e-242 mdh 1.1.1.37 - C ko:K00024 ko00020,ko00270,ko00620,ko00630,ko00680,ko00710,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00270,map00620,map00630,map00680,map00710,map00720,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Belongs to the LDH MDH superfamily
PDDFDHOE_01428 2.71e-98 - - - P ko:K03711 - ko00000,ko03000 Psort location Cytoplasmic, score 8.96
PDDFDHOE_01429 0.0 cadA 3.6.3.3, 3.6.3.5 - P ko:K01534 - ko00000,ko01000 Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_01430 0.0 - - - S - - - Fic/DOC family
PDDFDHOE_01431 4.95e-150 - - - - - - - -
PDDFDHOE_01432 0.0 ispG 1.17.7.1, 1.17.7.3 - I ko:K03526 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
PDDFDHOE_01433 6.12e-106 purE 5.4.99.18 - F ko:K01588 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
PDDFDHOE_01434 2.82e-87 gcvH - - E ko:K02437 ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200 ko00000,ko00001,ko00002 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein
PDDFDHOE_01435 3.38e-149 - - - I - - - Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_01436 0.0 rpoN - - K ko:K03092 ko02020,ko05111,map02020,map05111 ko00000,ko00001,ko03021 COG1508 DNA-directed RNA polymerase specialized sigma subunit sigma54 homolog
PDDFDHOE_01437 0.0 - 3.6.4.12 - L ko:K03654 ko03018,map03018 ko00000,ko00001,ko01000,ko03400 DNA helicase
PDDFDHOE_01438 4.61e-37 - - - S - - - HicA toxin of bacterial toxin-antitoxin,
PDDFDHOE_01439 1.67e-49 - - - S - - - HicB family
PDDFDHOE_01440 0.0 pepP 3.4.11.9 - E ko:K01262 - ko00000,ko01000,ko01002 Psort location Cytoplasmic, score
PDDFDHOE_01441 0.0 - 3.2.1.40 - G ko:K05989 - ko00000,ko01000 Alpha-L-rhamnosidase N-terminal domain protein
PDDFDHOE_01442 0.0 - 3.2.1.40 - G ko:K05989 - ko00000,ko01000 COG NOG04002 non supervised orthologous group
PDDFDHOE_01443 0.0 - - - Q - - - COG3458 Acetyl esterase (deacetylase)
PDDFDHOE_01444 2.27e-98 - - - - - - - -
PDDFDHOE_01445 0.0 udk2 2.7.1.48 - FJ ko:K00876 ko00240,ko00983,ko01100,map00240,map00983,map01100 ko00000,ko00001,ko01000 Phosphoribulokinase Uridine kinase family
PDDFDHOE_01446 0.0 - - - P ko:K03324 - ko00000,ko02000 Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_01447 3.2e-266 - 3.1.3.97 - S ko:K07053 - ko00000,ko01000 Domain of unknown function
PDDFDHOE_01448 0.0 - - - S - - - NHL repeat
PDDFDHOE_01449 0.0 - - - P - - - TonB dependent receptor
PDDFDHOE_01450 0.0 - - - M ko:K21572 - ko00000,ko02000 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
PDDFDHOE_01451 7.91e-216 - - - S - - - Pfam:DUF5002
PDDFDHOE_01452 8.84e-146 - - - L - - - COG NOG29822 non supervised orthologous group
PDDFDHOE_01453 3.57e-84 - - - - - - - -
PDDFDHOE_01454 3.12e-105 - - - L - - - DNA-binding protein
PDDFDHOE_01455 8.53e-38 rubR - - C - - - Psort location Cytoplasmic, score
PDDFDHOE_01456 4.16e-272 - - - T - - - His Kinase A (phosphoacceptor) domain
PDDFDHOE_01457 0.0 yoaB 3.6.3.8 - P ko:K01537 - ko00000,ko01000 Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_01458 2.08e-151 yihX 3.1.3.10, 3.1.3.104 - S ko:K07025,ko:K20866,ko:K21063 ko00010,ko00740,ko01100,ko01110,ko01120,map00010,map00740,map01100,map01110,map01120 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score 8.96
PDDFDHOE_01459 7.88e-226 ribF 2.7.1.26, 2.7.7.2 - H ko:K11753 ko00740,ko01100,ko01110,map00740,map01100,map01110 ko00000,ko00001,ko00002,ko01000 riboflavin biosynthesis protein
PDDFDHOE_01461 1.79e-175 - - - S ko:K07052 - ko00000 CAAX amino terminal protease family
PDDFDHOE_01462 6.08e-145 - - - S - - - Psort location CytoplasmicMembrane, score
PDDFDHOE_01463 1.03e-41 - - - K ko:K07727 - ko00000,ko03000 Psort location Cytoplasmic, score 8.96
PDDFDHOE_01464 1.19e-93 sufE - - S ko:K02426 - ko00000 COG2166 SufE protein probably involved in Fe-S center assembly
PDDFDHOE_01465 1.54e-249 ywaD - - S - - - glutaminyl-peptide cyclotransferase (glutaminyl cyclase) K00683
PDDFDHOE_01466 2.47e-220 ykfA 3.4.17.13 - V ko:K01297 - ko00000,ko01000,ko01002,ko01011 proteins, homologs of microcin C7 resistance protein MccF
PDDFDHOE_01467 6.99e-203 bglA_1 - - G - - - Glycosyl hydrolase family 16
PDDFDHOE_01468 5.22e-228 - 2.3.1.19, 2.3.1.8 - C ko:K00625,ko:K00634 ko00430,ko00620,ko00640,ko00650,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00650,map00680,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score
PDDFDHOE_01469 4.83e-255 buk 2.7.2.7 - H ko:K00929 ko00650,ko01100,map00650,map01100 ko00000,ko00001,ko01000 Belongs to the acetokinase family
PDDFDHOE_01470 0.0 - - - H - - - COG NOG08812 non supervised orthologous group
PDDFDHOE_01471 1.59e-94 - - - K - - - Helix-turn-helix XRE-family like proteins
PDDFDHOE_01473 3.63e-66 - - - - - - - -
PDDFDHOE_01474 0.0 - - - S - - - Tetratricopeptide repeat
PDDFDHOE_01475 0.0 - - - G - - - Glycosyl hydrolase family 92
PDDFDHOE_01476 0.0 - 3.2.1.24 GH38 G ko:K01191 ko00511,map00511 ko00000,ko00001,ko01000,ko04131 Alpha mannosidase middle domain
PDDFDHOE_01477 6.45e-45 - - - - - - - -
PDDFDHOE_01478 9.82e-118 - - - K ko:K03088 - ko00000,ko03021 Bacterial regulatory proteins, luxR family
PDDFDHOE_01479 0.0 - - - S - - - Psort location
PDDFDHOE_01480 1.07e-86 - - - - - - - -
PDDFDHOE_01481 4.34e-75 nuoA 1.6.5.3 - C ko:K00330 ko00190,ko01100,map00190,map01100 ko00000,ko00001,ko00002,ko01000 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
PDDFDHOE_01482 1.17e-143 nuoB 1.6.5.3 - C ko:K00331 ko00190,ko01100,map00190,map01100 ko00000,ko00001,ko00002,ko01000 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
PDDFDHOE_01483 0.0 nuoC 1.6.5.3 - C ko:K00333,ko:K13378 ko00190,ko01100,map00190,map01100 ko00000,ko00001,ko00002,ko01000 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
PDDFDHOE_01484 4.88e-262 nuoH 1.6.5.3 - C ko:K00337 ko00190,ko01100,map00190,map01100 ko00000,ko00001,ko00002,ko01000 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
PDDFDHOE_01485 1.01e-98 nuoI 1.6.5.3 - C ko:K00338 ko00190,ko01100,map00190,map01100 ko00000,ko00001,ko00002,ko01000 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
PDDFDHOE_01486 1.39e-106 nuoJ 1.6.5.3 - C ko:K00339 ko00190,ko01100,map00190,map01100 ko00000,ko00001,ko00002,ko01000 COG0839 NADH ubiquinone oxidoreductase subunit 6 (chain J)
PDDFDHOE_01487 3.53e-63 nuoK 1.6.5.3 - C ko:K00340 ko00190,ko01100,map00190,map01100 ko00000,ko00001,ko00002,ko01000 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
PDDFDHOE_01488 0.0 nuoL 1.6.5.3 - CP ko:K00341 ko00190,ko01100,map00190,map01100 ko00000,ko00001,ko00002,ko01000 COG1009 NADH ubiquinone oxidoreductase subunit 5 (chain L) Multisubunit Na H antiporter MnhA subunit
PDDFDHOE_01489 0.0 nuoM 1.6.5.3 - C ko:K00342 ko00190,ko01100,map00190,map01100 ko00000,ko00001,ko00002,ko01000 proton-translocating NADH-quinone oxidoreductase, chain M
PDDFDHOE_01490 0.0 nuoN 1.6.5.3 - C ko:K00343 ko00190,ko01100,map00190,map01100 ko00000,ko00001,ko00002,ko01000 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
PDDFDHOE_01491 0.0 - - - T - - - PAS domain S-box protein
PDDFDHOE_01492 4.75e-269 - - - N - - - COG NOG06100 non supervised orthologous group
PDDFDHOE_01493 0.0 - - - M - - - TonB-dependent receptor
PDDFDHOE_01494 6.5e-214 - - - K - - - Transcriptional regulator, AraC family
PDDFDHOE_01495 3.64e-307 ybdG_2 - - M ko:K16053 - ko00000,ko02000 Psort location CytoplasmicMembrane, score
PDDFDHOE_01496 4.74e-235 - - - P - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_01497 2.59e-201 - - - P - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_01498 1.56e-204 - - - EG - - - Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_01499 9.79e-293 - - - GP ko:K07214 - ko00000 Putative esterase
PDDFDHOE_01500 2.27e-207 - - - G - - - Glycosyl hydrolases family 35
PDDFDHOE_01501 0.0 - 3.2.1.21 GH3 G ko:K05349 ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110 ko00000,ko00001,ko01000 Fibronectin type III-like domain
PDDFDHOE_01502 0.0 - - - G - - - Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain
PDDFDHOE_01503 4.62e-13 - - - M - - - O-Glycosyl hydrolase family 30
PDDFDHOE_01504 4.01e-12 - 3.2.1.40 - N ko:K05989 - ko00000,ko01000 domain, Protein
PDDFDHOE_01505 1.13e-92 - - - F ko:K21572 - ko00000,ko02000 Pfam:SusD
PDDFDHOE_01506 4.54e-235 - - - P - - - TonB dependent receptor
PDDFDHOE_01507 7.43e-159 - - - PT - - - Domain of unknown function (DUF4974)
PDDFDHOE_01508 2.56e-95 - - - K ko:K03088 - ko00000,ko03021 sigma70 factor
PDDFDHOE_01509 0.0 - 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 beta-galactosidase
PDDFDHOE_01510 6.15e-259 argK - - E ko:K07588 - ko00000,ko01000 Lao Ao transport system ATPase
PDDFDHOE_01511 5.99e-266 - - - S - - - COG NOG19146 non supervised orthologous group
PDDFDHOE_01512 0.0 - - - S - - - COG2373 Large extracellular alpha-helical protein
PDDFDHOE_01513 0.0 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_01515 0.0 pepD_2 - - E ko:K01270 ko00480,ko01100,map00480,map01100 ko00000,ko00001,ko01000,ko01002 Xaa-His dipeptidase
PDDFDHOE_01516 9.93e-235 - - - S ko:K07027 - ko00000,ko02000 Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_01517 1.76e-191 ksgA 2.1.1.182 - J ko:K02528 - ko00000,ko01000,ko03009 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
PDDFDHOE_01518 3.77e-267 mgtE - - P ko:K06213 - ko00000,ko02000 Acts as a magnesium transporter
PDDFDHOE_01519 0.0 - - - A - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_01520 0.0 - - - - - - - -
PDDFDHOE_01521 1.55e-140 - - - S - - - Domain of unknown function (DUF5025)
PDDFDHOE_01522 1.29e-84 - - - - - - - -
PDDFDHOE_01523 0.0 - - - NU - - - Type IV pilus biogenesis stability protein PilW
PDDFDHOE_01524 0.0 - - - M ko:K07071 - ko00000 Domain of unknown function (DUF1731)
PDDFDHOE_01525 9.54e-61 - - - S ko:K06975 - ko00000 GCN5-related N-acetyl-transferase
PDDFDHOE_01526 4.6e-62 - - - S - - - COG NOG23408 non supervised orthologous group
PDDFDHOE_01527 3.02e-171 - - - S - - - Oxidoreductase, short chain dehydrogenase reductase family protein
PDDFDHOE_01528 6.64e-56 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_01529 2.93e-313 mepA_7 - - V - - - Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_01530 1.56e-230 - - - S - - - Fimbrillin-like
PDDFDHOE_01531 0.0 rluA 5.4.99.28, 5.4.99.29 - J ko:K06177 - ko00000,ko01000,ko03009,ko03016 Pseudouridine synthase, RluA family
PDDFDHOE_01532 1.7e-128 - - - E - - - GDSL-like Lipase/Acylhydrolase
PDDFDHOE_01533 2.32e-104 nodN - - I - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_01534 2.11e-148 - - - U ko:K05595 - ko00000,ko02000 MarC family integral membrane protein
PDDFDHOE_01535 4.3e-124 - - - S - - - COG NOG35345 non supervised orthologous group
PDDFDHOE_01536 0.0 gloA 4.4.1.5 - E ko:K01759,ko:K03827 ko00620,map00620 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score
PDDFDHOE_01537 7e-211 per1 3.5.2.6 - V ko:K17836 ko00311,ko01130,ko01501,map00311,map01130,map01501 ko00000,ko00001,ko00002,ko01000,ko01504 COG2367 Beta-lactamase class A
PDDFDHOE_01538 5.84e-293 - - - S - - - SEC-C motif
PDDFDHOE_01539 3.62e-215 - - - S - - - HEPN domain
PDDFDHOE_01540 0.0 - - - S - - - P-loop ATPase and inactivated derivatives
PDDFDHOE_01541 2.2e-104 - - - S - - - COG NOG19145 non supervised orthologous group
PDDFDHOE_01542 1.29e-262 yjmD_2 - - E ko:K18369 ko00640,map00640 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score
PDDFDHOE_01543 5.86e-185 spoU - - H ko:K03437 - ko00000,ko03016 RNA methyltransferase TrmH family
PDDFDHOE_01544 0.0 - 3.4.21.53 - O ko:K01338 ko04112,map04112 ko00000,ko00001,ko01000,ko01002 Putative ATP-dependent Lon protease
PDDFDHOE_01545 2.88e-226 - - - H - - - PglZ domain
PDDFDHOE_01546 7.8e-156 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_01547 1.43e-290 - - - V - - - Eco57I restriction-modification methylase
PDDFDHOE_01548 4.54e-153 - - - D - - - nuclear chromosome segregation
PDDFDHOE_01549 1.61e-11 - - - S - - - Domain of unknown function (DUF1788)
PDDFDHOE_01551 1.71e-31 - - - K - - - DNA-binding helix-turn-helix protein
PDDFDHOE_01552 0.0 mnmE - - S ko:K03650 - ko00000,ko01000,ko03016 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
PDDFDHOE_01553 9.25e-31 - - - T - - - Histidine kinase
PDDFDHOE_01554 1.29e-36 - - - T - - - Histidine kinase
PDDFDHOE_01555 9.82e-156 - - - S ko:K07118 - ko00000 NmrA-like family
PDDFDHOE_01556 1.73e-215 udp 2.4.2.3 - F ko:K00757 ko00240,ko00983,ko01100,map00240,map00983,map01100 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score
PDDFDHOE_01557 3.62e-208 - - - S - - - UPF0365 protein
PDDFDHOE_01558 4.37e-85 - - - O - - - Psort location CytoplasmicMembrane, score
PDDFDHOE_01559 0.0 - - - S - - - COG NOG11656 non supervised orthologous group
PDDFDHOE_01560 1.06e-178 ttcA - - H ko:K14058 - ko00000,ko03016 Belongs to the TtcA family
PDDFDHOE_01561 8.85e-85 - - - S ko:K09922 - ko00000 Psort location CytoplasmicMembrane, score
PDDFDHOE_01562 3.63e-247 apbE 2.7.1.180 - H ko:K03734 - ko00000,ko01000 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
PDDFDHOE_01563 1.31e-129 mntP - - P - - - Probably functions as a manganese efflux pump
PDDFDHOE_01564 1.3e-167 - - - S - - - COG NOG28307 non supervised orthologous group
PDDFDHOE_01565 1.9e-231 arnC - - M - - - involved in cell wall biogenesis
PDDFDHOE_01566 1.5e-125 - - - S - - - Psort location CytoplasmicMembrane, score
PDDFDHOE_01568 6.91e-259 - - - - - - - -
PDDFDHOE_01569 1.65e-88 - - - - - - - -
PDDFDHOE_01570 4.44e-127 - - - K ko:K03088 - ko00000,ko03021 Sigma-70, region 4
PDDFDHOE_01571 6.5e-306 eno 4.2.1.11 - G ko:K01689 ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066 ko00000,ko00001,ko00002,ko01000,ko03019,ko04147 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
PDDFDHOE_01572 8.42e-69 - - - S - - - Pentapeptide repeat protein
PDDFDHOE_01573 3.2e-83 crcB - - D ko:K06199 - ko00000,ko02000 Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PDDFDHOE_01574 6.64e-187 - - - - - - - -
PDDFDHOE_01575 1.4e-198 - - - M - - - Peptidase family M23
PDDFDHOE_01576 0.0 susB 3.2.1.20, 3.2.1.3 GH31,GH97 G ko:K01187,ko:K21574 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 COG NOG06228 non supervised orthologous group
PDDFDHOE_01577 0.0 purF 2.4.2.14 - F ko:K00764 ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000,ko01002 glutamine phosphoribosylpyrophosphate amidotransferase
PDDFDHOE_01578 8.35e-297 pepT 3.4.11.4 - E ko:K01258 - ko00000,ko01000,ko01002 Cleaves the N-terminal amino acid of tripeptides
PDDFDHOE_01579 1.72e-268 gcvT 2.1.2.10 - H ko:K00605 ko00260,ko00630,ko00670,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map00670,map01100,map01110,map01130,map01200 ko00000,ko00001,ko00002,ko01000 The glycine cleavage system catalyzes the degradation of glycine
PDDFDHOE_01580 0.0 nhaA - - P ko:K03455 - ko00000 Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_01581 8.04e-101 - - - FG - - - Histidine triad domain protein
PDDFDHOE_01582 3.03e-91 hslR - - J ko:K04762 - ko00000,ko03110 COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)
PDDFDHOE_01583 6.55e-137 pth 3.1.1.29 - J ko:K01056 - ko00000,ko01000,ko03012 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
PDDFDHOE_01584 3.45e-131 ctc - - J ko:K02897 ko03010,map03010 ko00000,ko00001,ko00002,ko03011 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
PDDFDHOE_01585 1.12e-81 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_01586 8.74e-208 nusB - - K ko:K03625 - ko00000,ko03009,ko03021 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
PDDFDHOE_01587 7.89e-57 yajC - - U ko:K03210 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 COG1862 Preprotein translocase subunit YajC
PDDFDHOE_01588 0.0 topA 5.99.1.2 - L ko:K03168 - ko00000,ko01000,ko03032,ko03400 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
PDDFDHOE_01589 0.0 - - - S - - - COG NOG28036 non supervised orthologous group
PDDFDHOE_01590 0.0 argS 6.1.1.19 - J ko:K01887 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Psort location Cytoplasmic, score
PDDFDHOE_01591 9.33e-49 hupB - - L ko:K03530 - ko00000,ko03032,ko03036,ko03400 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
PDDFDHOE_01592 2.32e-161 - 3.4.21.105 - S ko:K09650 - ko00000,ko01000,ko01002,ko03029 Psort location CytoplasmicMembrane, score
PDDFDHOE_01593 4.91e-210 - - - S - - - Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_01594 2.31e-257 - - - L - - - Endonuclease Exonuclease phosphatase family
PDDFDHOE_01595 0.0 dcp 3.4.15.5 - E ko:K01284 - ko00000,ko01000,ko01002 Peptidase family M3
PDDFDHOE_01596 0.0 secD - - U ko:K03072,ko:K12257 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
PDDFDHOE_01598 0.0 porA 1.2.7.11, 1.2.7.3 - C ko:K00174 ko00010,ko00020,ko00620,ko00650,ko00720,ko01100,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00650,map00720,map01100,map01120,map01130,map01200 br01601,ko00000,ko00001,ko00002,ko01000 2-oxoacid acceptor oxidoreductase, alpha subunit
PDDFDHOE_01599 2.28e-249 oorB 1.2.7.11, 1.2.7.3 - C ko:K00175 ko00010,ko00020,ko00620,ko00650,ko00720,ko01100,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00650,map00720,map01100,map01120,map01130,map01200 br01601,ko00000,ko00001,ko00002,ko01000 COG1013 Pyruvate ferredoxin oxidoreductase and related 2-oxoacid ferredoxin
PDDFDHOE_01600 2.73e-282 lolE - - M ko:K09808,ko:K09815 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 COG4591 ABC-type transport system, involved in lipoprotein release, permease component
PDDFDHOE_01601 5.86e-68 rbfA - - J ko:K02834 - ko00000,ko03009 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
PDDFDHOE_01602 1.3e-152 mdmC 2.1.1.104 - S ko:K00588 ko00360,ko00940,ko00941,ko00945,ko01100,ko01110,map00360,map00940,map00941,map00945,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score
PDDFDHOE_01603 0.0 pyk 2.7.1.40 - G ko:K00873 ko00010,ko00230,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko04930,ko05165,ko05203,ko05230,map00010,map00230,map00620,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map04930,map05165,map05203,map05230 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Pyruvate kinase
PDDFDHOE_01604 9.8e-97 aroQ 4.2.1.10 - E ko:K03786 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes a trans-dehydration via an enolate intermediate
PDDFDHOE_01605 2.37e-222 xerC - - D ko:K04763 - ko00000,ko03036 Tyrosine recombinase XerC
PDDFDHOE_01606 0.0 - - - S - - - Tetratricopeptide repeat protein
PDDFDHOE_01607 3.7e-259 - - - CO - - - AhpC TSA family
PDDFDHOE_01608 0.0 comM - - O ko:K07391 - ko00000 Magnesium chelatase, subunit ChlI
PDDFDHOE_01609 0.0 - - - S - - - Tetratricopeptide repeat protein
PDDFDHOE_01610 7.16e-300 - - - S - - - aa) fasta scores E()
PDDFDHOE_01611 4.82e-256 - 5.1.3.3 - G ko:K01785 ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130 ko00000,ko00001,ko00002,ko01000 Converts alpha-aldose to the beta-anomer
PDDFDHOE_01612 0.0 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
PDDFDHOE_01613 1.44e-54 - 3.2.1.22 - G ko:K07407 ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603 ko00000,ko00001,ko01000 alpha-galactosidase
PDDFDHOE_01615 1.11e-282 - - - M - - - Psort location OuterMembrane, score
PDDFDHOE_01616 0.0 - - - DM - - - Chain length determinant protein
PDDFDHOE_01617 2.23e-154 - - - M ko:K01991 ko02026,map02026 ko00000,ko00001,ko02000 COG1596 Periplasmic protein involved in polysaccharide export
PDDFDHOE_01618 1.43e-242 - 2.4.1.348 GT4 M ko:K12995 - ko00000,ko01000,ko01003,ko01005 Glycosyl transferase 4-like
PDDFDHOE_01619 2.58e-146 - - - M - - - Glycosyl transferases group 1
PDDFDHOE_01620 1.33e-202 - - - M - - - Glycosyltransferase, group 1 family protein
PDDFDHOE_01621 8.15e-193 - - - S - - - Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_01622 2.26e-169 - - - M - - - Glycosyltransferase like family 2
PDDFDHOE_01623 2.08e-208 - - - I - - - Acyltransferase family
PDDFDHOE_01624 2.92e-157 - - - S - - - Core-2/I-Branching enzyme
PDDFDHOE_01625 8.45e-161 - - - S - - - Core-2/I-Branching enzyme
PDDFDHOE_01626 2.46e-165 - - - M - - - Capsular polysaccharide synthesis protein
PDDFDHOE_01627 4.7e-179 - - - M - - - Glycosyl transferase family 8
PDDFDHOE_01628 2.71e-87 - 2.3.1.30 - E ko:K00640 ko00270,ko00920,ko01100,ko01110,ko01120,ko01200,ko01230,ko05111,map00270,map00920,map01100,map01110,map01120,map01200,map01230,map05111 ko00000,ko00001,ko00002,ko01000 Bacterial transferase hexapeptide (six repeats)
PDDFDHOE_01629 3.76e-169 - - - S - - - Glycosyltransferase WbsX
PDDFDHOE_01630 2.12e-37 - - - S - - - Glycosyltransferase, group 2 family protein
PDDFDHOE_01631 4.44e-80 - - - M - - - Glycosyl transferases group 1
PDDFDHOE_01632 2.78e-38 - - - M - - - Polysaccharide pyruvyl transferase
PDDFDHOE_01633 4.68e-146 - - - C - - - coenzyme F420-reducing hydrogenase beta subunit
PDDFDHOE_01634 3.92e-200 - - - V - - - COG NOG25117 non supervised orthologous group
PDDFDHOE_01635 1.15e-280 - - - S - - - Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_01636 4.04e-247 - - - M - - - Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
PDDFDHOE_01637 2.18e-192 - - - M - - - Male sterility protein
PDDFDHOE_01638 3.71e-149 ispD2 2.7.7.60 - I ko:K00991 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
PDDFDHOE_01639 8.83e-189 - - - M - - - Glycosyltransferase, group 2 family
PDDFDHOE_01640 4.24e-111 purN 2.1.2.2 - F ko:K11175 ko00230,ko00670,ko01100,ko01110,ko01130,map00230,map00670,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
PDDFDHOE_01641 2.23e-142 - - - S - - - WbqC-like protein family
PDDFDHOE_01642 3.8e-237 - 2.6.1.33 - E ko:K20429 - ko00000,ko01000 Belongs to the DegT DnrJ EryC1 family
PDDFDHOE_01643 5.47e-103 - - - K - - - KOW (Kyprides, Ouzounis, Woese) motif.
PDDFDHOE_01644 2.41e-214 - 5.1.3.26 - M ko:K19997 - ko00000,ko01000 Male sterility protein
PDDFDHOE_01645 4.71e-235 mraY2 - - M - - - Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_01646 4.11e-209 - - - K - - - Helix-turn-helix domain
PDDFDHOE_01647 0.0 - - - M - - - TonB-dependent receptor
PDDFDHOE_01648 0.0 - - - S - - - protein conserved in bacteria
PDDFDHOE_01649 0.0 - 3.2.1.21 GH3 G ko:K05349 ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110 ko00000,ko00001,ko01000 glycosyl hydrolase, family 3
PDDFDHOE_01650 0.0 - - - S ko:K21572 - ko00000,ko02000 COG NOG26302 non supervised orthologous group
PDDFDHOE_01651 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PDDFDHOE_01652 0.0 - - - S - - - Tetratricopeptide repeats
PDDFDHOE_01656 3.43e-154 - - - - - - - -
PDDFDHOE_01659 5.17e-219 - - - G - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_01661 3.53e-255 - - - M - - - peptidase S41
PDDFDHOE_01662 8.2e-211 - - - S - - - COG NOG19130 non supervised orthologous group
PDDFDHOE_01663 0.0 parC - - L ko:K02621 - ko00000,ko01000,ko02048,ko03032,ko03036 COG0188 Type IIA topoisomerase (DNA gyrase topo II topoisomerase IV) A subunit
PDDFDHOE_01664 0.0 - - - S - - - Oxidoreductase family, NAD-binding Rossmann fold
PDDFDHOE_01665 1.96e-45 - - - - - - - -
PDDFDHOE_01666 0.0 - - - S - - - Oxidoreductase family, C-terminal alpha/beta domain
PDDFDHOE_01667 1.41e-178 - 2.7.1.180 - H ko:K03734 - ko00000,ko01000 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
PDDFDHOE_01668 0.0 - - - S - - - Putative oxidoreductase C terminal domain
PDDFDHOE_01669 8.4e-235 - - - S - - - Oxidoreductase family, NAD-binding Rossmann fold
PDDFDHOE_01670 1.64e-193 - 3.5.99.6 - G ko:K02564 ko00520,ko01100,map00520,map01100 ko00000,ko00001,ko01000 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
PDDFDHOE_01671 1.2e-283 - 3.5.1.25 - G ko:K01443 ko00520,ko01130,map00520,map01130 ko00000,ko00001,ko01000 Belongs to the metallo-dependent hydrolases superfamily. NagA family
PDDFDHOE_01672 4.65e-312 - - - G ko:K02429 - ko00000,ko02000 Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_01673 0.0 - 3.2.1.50 - G ko:K01205 ko00531,ko01100,ko04142,map00531,map01100,map04142 ko00000,ko00001,ko00002,ko01000,ko04147 Alpha-N-acetylglucosaminidase
PDDFDHOE_01674 3.02e-301 - - - C - - - Domain of unknown function (DUF4855)
PDDFDHOE_01675 0.0 - 3.2.1.22 - G ko:K07407 ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603 ko00000,ko00001,ko01000 Alpha galactosidase A
PDDFDHOE_01676 1.34e-259 - - - E - - - COG NOG09493 non supervised orthologous group
PDDFDHOE_01677 0.0 - - - G - - - Phosphodiester glycosidase
PDDFDHOE_01678 0.0 - - - G - - - hydrolase activity, acting on glycosyl bonds
PDDFDHOE_01679 0.0 - - - - - - - -
PDDFDHOE_01680 0.0 - 3.1.1.53 - G ko:K05970 - ko00000,ko01000 COG NOG04984 non supervised orthologous group
PDDFDHOE_01681 0.0 - 3.2.1.52 GH20 G ko:K12373 ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142 ko00000,ko00001,ko00002,ko01000,ko03110 Glycosyl hydrolase family 20, catalytic domain
PDDFDHOE_01682 0.0 - - - G - - - Belongs to the glycosyl hydrolase 2 family
PDDFDHOE_01683 2.17e-212 - 2.7.1.2 - GK ko:K00845 ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 ROK family
PDDFDHOE_01684 2.56e-248 - 2.6.1.16 - M ko:K00820 ko00250,ko00520,ko01100,ko01130,ko04931,map00250,map00520,map01100,map01130,map04931 ko00000,ko00001,ko01000,ko01002 SIS domain
PDDFDHOE_01685 0.0 - - - S - - - Domain of unknown function (DUF5018)
PDDFDHOE_01686 0.0 - - - F ko:K21572 - ko00000,ko02000 SusD family
PDDFDHOE_01687 0.0 - - - H - - - TonB-linked outer membrane protein, SusC RagA family
PDDFDHOE_01688 3.04e-312 ce 5.1.3.8 - G ko:K01787 ko00520,map00520 ko00000,ko00001,ko01000 COG COG2942 N-acyl-D-glucosamine 2-epimerase
PDDFDHOE_01689 0.0 araE - - P ko:K08138,ko:K08139 ko04113,map04113 ko00000,ko00001,ko02000 Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family
PDDFDHOE_01690 1.43e-278 - - - S - - - Domain of unknown function (DUF5109)
PDDFDHOE_01691 8.51e-237 - - - Q - - - Dienelactone hydrolase
PDDFDHOE_01693 2.42e-285 - - - K ko:K02529 - ko00000,ko03000 transcriptional regulator (AraC family)
PDDFDHOE_01694 2.22e-103 - - - L - - - DNA-binding protein
PDDFDHOE_01695 0.0 glyQS 6.1.1.14 - J ko:K01880 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Catalyzes the attachment of glycine to tRNA(Gly)
PDDFDHOE_01696 5.62e-84 - 5.2.1.8 - M ko:K01802,ko:K03773 - ko00000,ko01000,ko03110 FkbP-type peptidyl-prolyl cis-trans
PDDFDHOE_01697 1.48e-99 - - - - - - - -
PDDFDHOE_01698 3.75e-210 - - - S - - - COG NOG24904 non supervised orthologous group
PDDFDHOE_01699 4.43e-251 - - - S - - - Ser Thr phosphatase family protein
PDDFDHOE_01700 6.59e-111 ispF 4.6.1.12 - H ko:K01770 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP)
PDDFDHOE_01701 3.74e-148 fahA - - Q - - - 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase, fumarylacetoacetate hydrolase family K01828
PDDFDHOE_01702 3.17e-157 rex - - K ko:K01926 - ko00000,ko03000 Modulates transcription in response to changes in cellular NADH NAD( ) redox state
PDDFDHOE_01703 1.79e-266 - - - S - - - Carboxypeptidase regulatory-like domain
PDDFDHOE_01704 2.01e-133 - - - S - - - Carboxypeptidase regulatory-like domain
PDDFDHOE_01705 7.79e-78 - - - J ko:K03113 ko03013,map03013 ko00000,ko00001,ko03012 COG0023 Translation initiation factor 1 (eIF-1 SUI1) and related
PDDFDHOE_01706 3.5e-225 tsf - - J ko:K02357 - ko00000,ko03012,ko03029 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
PDDFDHOE_01707 6.56e-188 rpsB - - J ko:K02967 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the universal ribosomal protein uS2 family
PDDFDHOE_01708 1.02e-81 rpsI - - J ko:K02996 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the universal ribosomal protein uS9 family
PDDFDHOE_01709 2.33e-108 rplM - - J ko:K02871 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
PDDFDHOE_01710 8.6e-118 - - - S - - - COG NOG27649 non supervised orthologous group
PDDFDHOE_01711 0.0 asnS 6.1.1.22 - J ko:K01893 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Psort location Cytoplasmic, score
PDDFDHOE_01712 1.35e-236 rluB 5.4.99.22 - J ko:K06178 - ko00000,ko01000,ko03009 Belongs to the pseudouridine synthase RsuA family
PDDFDHOE_01713 0.0 purB 4.3.2.2 - F ko:K01756 ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score
PDDFDHOE_01715 4.44e-123 - 2.3.1.79 - S ko:K00661 - ko00000,ko01000 Maltose acetyltransferase
PDDFDHOE_01716 5.43e-181 yaaA - - S ko:K09861 - ko00000 Belongs to the UPF0246 family
PDDFDHOE_01717 0.0 - 3.2.1.52 GH20 G ko:K12373 ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142 ko00000,ko00001,ko00002,ko01000,ko03110 Glycosyl hydrolase family 20, catalytic domain protein
PDDFDHOE_01718 0.0 carB 6.3.5.5 - F ko:K01955 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ)
PDDFDHOE_01720 8.87e-269 trpS 6.1.1.2 - J ko:K01867 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the class-I aminoacyl-tRNA synthetase family
PDDFDHOE_01721 0.0 - - - S - - - Predicted membrane protein (DUF2339)
PDDFDHOE_01722 8.25e-298 - 3.2.1.130, 3.2.1.198 GH99 S ko:K21132 - ko00000,ko01000 Glycosyl hydrolase family 99
PDDFDHOE_01723 3.71e-284 - - - S - - - Domain of unknown function (DUF4972)
PDDFDHOE_01724 4.8e-253 - - - S - - - Domain of unknown function (DUF4972)
PDDFDHOE_01725 0.0 - - - K - - - GxGYxY sequence motif in domain of unknown function N-terminal
PDDFDHOE_01726 0.0 - - - G - - - cog cog3537
PDDFDHOE_01727 0.0 - - - K - - - DNA-templated transcription, initiation
PDDFDHOE_01728 5.25e-166 - - - S - - - Protein of unknown function (DUF3823)
PDDFDHOE_01729 0.0 - - - P ko:K21572 - ko00000,ko02000 SusD family
PDDFDHOE_01730 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PDDFDHOE_01731 0.0 - - - T - - - COG NOG26059 non supervised orthologous group
PDDFDHOE_01732 8.17e-286 - - - M - - - Psort location OuterMembrane, score
PDDFDHOE_01733 0.0 mutL - - L ko:K03572 ko03430,map03430 ko00000,ko00001,ko03400 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
PDDFDHOE_01734 1.34e-66 - - - S - - - COG NOG23401 non supervised orthologous group
PDDFDHOE_01735 0.0 lptD - - M - - - COG NOG06415 non supervised orthologous group
PDDFDHOE_01736 0.0 surA 5.2.1.8 - M ko:K03771 - ko00000,ko01000,ko03110 peptidylprolyl isomerase
PDDFDHOE_01737 9.12e-201 - - - O - - - COG NOG23400 non supervised orthologous group
PDDFDHOE_01738 0.0 - 5.2.1.8 - M ko:K03771 - ko00000,ko01000,ko03110 COG COG0760 Parvulin-like peptidyl-prolyl isomerase
PDDFDHOE_01739 0.0 guaB 1.1.1.205 - F ko:K00088 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko04147 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth
PDDFDHOE_01740 0.0 recQ 3.6.4.12 - L ko:K03654 ko03018,map03018 ko00000,ko00001,ko01000,ko03400 ATP-dependent DNA helicase RecQ
PDDFDHOE_01741 1.69e-295 clpX - - O ko:K03544 ko04112,map04112 ko00000,ko00001,ko03110 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
PDDFDHOE_01742 7.17e-154 clpP 3.4.21.92 - O ko:K01358 ko04112,ko04212,map04112,map04212 ko00000,ko00001,ko01000,ko01002 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
PDDFDHOE_01743 1.5e-310 tig - - O ko:K03545 - ko00000 peptidyl-prolyl cis-trans isomerase (trigger factor)
PDDFDHOE_01744 1.2e-49 - - - S - - - COG COG0724 RNA-binding proteins (RRM domain)
PDDFDHOE_01745 2.49e-181 metN - - Q ko:K02065 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter, ATP-binding protein
PDDFDHOE_01746 2.1e-164 mlaE - - Q ko:K02066 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_01747 6.08e-177 lptB - - S ko:K06861 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 Psort location Cytoplasmic, score 9.12
PDDFDHOE_01748 6.37e-314 der - - S ko:K03977 - ko00000,ko03009 GTPase that plays an essential role in the late steps of ribosome biogenesis
PDDFDHOE_01749 1.11e-207 era - - S ko:K03595 - ko00000,ko03009,ko03029 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
PDDFDHOE_01750 7.66e-252 fabH 2.3.1.180 - I ko:K00648 ko00061,ko01100,ko01212,map00061,map01100,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
PDDFDHOE_01751 3.5e-40 rpmF - - J ko:K02911 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011,ko03029 Belongs to the bacterial ribosomal protein bL32 family
PDDFDHOE_01752 2.85e-128 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_01753 4.45e-163 - - - O - - - Heat shock 70 kDa protein
PDDFDHOE_01755 2.93e-69 - - - U - - - peptide transport
PDDFDHOE_01756 1.02e-64 - - - N - - - Flagellar Motor Protein
PDDFDHOE_01757 4.68e-96 - 3.4.21.107 - O ko:K04771 ko01503,ko02020,map01503,map02020 ko00000,ko00001,ko00002,ko01000,ko01002,ko03110 Trypsin-like peptidase domain
PDDFDHOE_01758 3.64e-21 - - - - - - - -
PDDFDHOE_01759 6.15e-112 - - - S - - - Fic/DOC family
PDDFDHOE_01760 1.07e-81 yccF - - S - - - Psort location CytoplasmicMembrane, score
PDDFDHOE_01761 2.47e-225 - - - S - - - Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_01762 1.46e-240 recA - - L ko:K03553 ko03440,map03440 ko00000,ko00001,ko00002,ko03400 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
PDDFDHOE_01763 7.84e-106 bcp 1.11.1.15 - O ko:K03564 - ko00000,ko01000 bacterioferritin comigratory protein
PDDFDHOE_01764 2.71e-306 LYS1 1.5.1.7 - E ko:K00290 ko00300,ko00310,ko01100,ko01110,ko01130,ko01230,map00300,map00310,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 COG1748 Saccharopine dehydrogenase and related
PDDFDHOE_01765 3.73e-301 - - - - - - - -
PDDFDHOE_01766 3.54e-184 - - - O - - - META domain
PDDFDHOE_01767 0.0 dnaK - - O ko:K04043 ko03018,ko04212,ko05152,map03018,map04212,map05152 ko00000,ko00001,ko03019,ko03029,ko03110,ko04147 Heat shock 70 kDa protein
PDDFDHOE_01768 3.26e-230 pitA - - P ko:K03306 - ko00000 Phosphate transporter family
PDDFDHOE_01769 7.46e-149 - - - P ko:K07220 - ko00000 COG1392 Phosphate transport regulator (distant homolog of PhoU)
PDDFDHOE_01770 6.88e-144 - - - S ko:K03975 - ko00000 Psort location CytoplasmicMembrane, score
PDDFDHOE_01771 5.58e-99 - - - - - - - -
PDDFDHOE_01772 9.67e-104 - - - K - - - Acetyltransferase (GNAT) domain
PDDFDHOE_01773 6.17e-300 - - - S - - - CarboxypepD_reg-like domain
PDDFDHOE_01774 1.49e-121 - - - K ko:K03088 - ko00000,ko03021 RNA polymerase sigma-70 factor
PDDFDHOE_01775 3.58e-202 - - - PT - - - Sigma factor regulatory protein, FecR PupR family
PDDFDHOE_01776 0.0 - - - S - - - CarboxypepD_reg-like domain
PDDFDHOE_01777 5.36e-36 - - - S - - - COG NOG17973 non supervised orthologous group
PDDFDHOE_01778 1.19e-120 - - - K ko:K03088 - ko00000,ko03021 Sigma-70, region 4
PDDFDHOE_01779 4.64e-76 - - - - - - - -
PDDFDHOE_01780 6.43e-126 - - - - - - - -
PDDFDHOE_01781 0.0 - - - P - - - ATP synthase F0, A subunit
PDDFDHOE_01782 2.43e-203 nfo 3.1.21.2 - L ko:K01151 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
PDDFDHOE_01783 0.0 hepB - - S - - - Heparinase II III-like protein
PDDFDHOE_01784 6.82e-288 - - - G - - - Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_01785 1.55e-226 - 2.7.1.2 - GK ko:K00845 ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 ROK family
PDDFDHOE_01786 0.0 - - - S - - - PHP domain protein
PDDFDHOE_01787 0.0 - - - P - - - COG COG3119 Arylsulfatase A and related enzymes
PDDFDHOE_01788 0.0 - 4.2.2.8 PL12 M ko:K19052 - ko00000,ko01000 Heparinase II III-like protein
PDDFDHOE_01789 0.0 - - - S - - - Glycosyl Hydrolase Family 88
PDDFDHOE_01790 0.0 - 3.2.1.51 GH95 G ko:K15923 ko00511,map00511 ko00000,ko00001,ko01000 COG NOG04001 non supervised orthologous group
PDDFDHOE_01791 0.0 - - - G - - - Lyase, N terminal
PDDFDHOE_01792 0.0 - - - GM ko:K21572 - ko00000,ko02000 Pfam:SusD
PDDFDHOE_01793 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PDDFDHOE_01794 3.32e-216 - - - S - - - Domain of unknown function (DUF4958)
PDDFDHOE_01795 0.0 - 4.2.2.8 PL12 M ko:K19052 - ko00000,ko01000 Heparinase II III-like protein
PDDFDHOE_01796 0.0 - 3.2.1.51 GH95 G ko:K15923 ko00511,map00511 ko00000,ko00001,ko01000 COG NOG04001 non supervised orthologous group
PDDFDHOE_01797 0.0 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
PDDFDHOE_01798 0.0 trpB 4.2.1.20 - E ko:K06001 ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
PDDFDHOE_01799 0.0 ktrB - - P ko:K03498 - ko00000,ko02000 Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_01800 1.01e-157 ktrA - - C ko:K03499 - ko00000,ko02000 Psort location Cytoplasmic, score 8.96
PDDFDHOE_01801 2.3e-257 - - - S - - - Endonuclease Exonuclease phosphatase family
PDDFDHOE_01803 0.0 - - - S - - - amine dehydrogenase activity
PDDFDHOE_01804 0.0 - - - H - - - TonB-linked outer membrane protein, SusC RagA family
PDDFDHOE_01805 0.0 - - - P ko:K21572 - ko00000,ko02000 Psort location OuterMembrane, score
PDDFDHOE_01806 6.26e-215 - - - S - - - Domain of unknown function (DUF4361)
PDDFDHOE_01807 0.0 - - - G - - - Glycosyl hydrolases family 43
PDDFDHOE_01808 2.17e-268 - - - G - - - Glycosyl hydrolases family 43
PDDFDHOE_01809 0.0 - - - S - - - COG NOG19133 non supervised orthologous group
PDDFDHOE_01810 5.54e-291 - - - E - - - Glycosyl Hydrolase Family 88
PDDFDHOE_01811 1.67e-248 - - - S - - - acetyltransferase involved in intracellular survival and related
PDDFDHOE_01812 1.34e-230 - - - S ko:K01163 - ko00000 Conserved protein
PDDFDHOE_01813 5.97e-147 lrgB - - M - - - Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_01814 1.93e-70 lrgA - - S ko:K06518 - ko00000,ko02000 Psort location CytoplasmicMembrane, score
PDDFDHOE_01815 6.41e-237 pta 2.3.1.8 - C ko:K00625,ko:K13788 ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score
PDDFDHOE_01816 3.46e-285 ackA 2.7.2.1 - F ko:K00925 ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PDDFDHOE_01817 1.49e-264 - - - M - - - Psort location CytoplasmicMembrane, score 9.46
PDDFDHOE_01818 1.02e-163 radC - - E ko:K03630 - ko00000 Belongs to the UPF0758 family
PDDFDHOE_01819 4.1e-67 yitW - - S - - - FeS assembly SUF system protein
PDDFDHOE_01820 1.84e-191 lpxH 3.6.1.54 - S ko:K03269 ko00540,ko01100,map00540,map01100 ko00000,ko00001,ko00002,ko01000,ko01005 Psort location Cytoplasmic, score
PDDFDHOE_01821 0.0 - 3.2.1.1, 3.2.1.133, 3.2.1.135, 3.2.1.54 GH13 M ko:K01176,ko:K01208 ko00500,ko01100,ko04973,map00500,map01100,map04973 ko00000,ko00001,ko01000 Alpha-amylase domain
PDDFDHOE_01822 0.0 - - - S ko:K21571 - ko00000 Domain of unknown function (DUF5115)
PDDFDHOE_01823 6.43e-284 - - - S ko:K21571 - ko00000 Outer membrane protein SusF_SusE
PDDFDHOE_01824 0.0 susD - - M ko:K21572 - ko00000,ko02000 SusD family
PDDFDHOE_01825 0.0 - - - HP ko:K21573 - ko00000,ko02000 TonB dependent receptor
PDDFDHOE_01826 0.0 susB 3.2.1.20, 3.2.1.3 GH31,GH97 G ko:K01187,ko:K21574 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 COG NOG06228 non supervised orthologous group
PDDFDHOE_01827 0.0 - 3.2.1.135 GH13 G ko:K21575 - ko00000,ko01000 Belongs to the glycosyl hydrolase 13 family
PDDFDHOE_01828 0.0 - - - S ko:K21557 - ko00000,ko03000 Psort location Cytoplasmic, score 8.96
PDDFDHOE_01829 0.0 - 3.1.3.1 - P ko:K01077 ko00730,ko00790,ko01100,ko02020,map00730,map00790,map01100,map02020 ko00000,ko00001,ko00002,ko00537,ko01000,ko04147 Belongs to the alkaline phosphatase family
PDDFDHOE_01830 2.28e-132 efp - - J ko:K02356 - ko00000,ko03012 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
PDDFDHOE_01831 8.16e-29 rpmH - - J ko:K02914 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL34 family
PDDFDHOE_01832 2.81e-149 spk1 2.7.11.1, 6.3.2.4 - S ko:K01921,ko:K08884,ko:K12132 ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502 ko00000,ko00001,ko01000,ko01001,ko01011 PASTA domain protein
PDDFDHOE_01833 2.43e-266 rluD 5.4.99.23 - J ko:K06180 - ko00000,ko01000,ko03009 Responsible for synthesis of pseudouridine from uracil
PDDFDHOE_01834 4.44e-225 ddl 6.3.2.4 - F ko:K01921 ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502 ko00000,ko00001,ko01000,ko01011 Belongs to the D-alanine--D-alanine ligase family
PDDFDHOE_01835 2.12e-275 - - - I - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_01836 3.03e-168 - - - S - - - COG NOG31798 non supervised orthologous group
PDDFDHOE_01837 8.64e-84 glpE - - P - - - Rhodanese-like protein
PDDFDHOE_01838 1.4e-234 argF 2.1.3.11, 2.1.3.9 - E ko:K09065,ko:K13043 ko00220,ko01100,ko01230,map00220,map01100,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the ATCase OTCase family
PDDFDHOE_01839 2.71e-298 proA 1.2.1.41 - E ko:K00147 ko00330,ko00332,ko01100,ko01110,ko01130,ko01230,map00330,map00332,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
PDDFDHOE_01840 8.7e-257 proB 2.7.2.11 - E ko:K00931 ko00330,ko00332,ko01100,ko01130,ko01230,map00330,map00332,map01100,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
PDDFDHOE_01841 7.68e-274 - - - E - - - DegT/DnrJ/EryC1/StrS aminotransferase family
PDDFDHOE_01842 2.5e-47 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_01843 6.46e-205 murI 5.1.1.3 - M ko:K01776 ko00471,ko01100,map00471,map01100 ko00000,ko00001,ko01000,ko01011 Provides the (R)-glutamate required for cell wall biosynthesis
PDDFDHOE_01844 4.45e-89 ompH - - M ko:K06142 - ko00000 membrane
PDDFDHOE_01845 3.03e-106 ompH - - M ko:K06142 - ko00000 membrane
PDDFDHOE_01846 0.0 yaeT - - M ko:K07277 - ko00000,ko02000,ko03029 Outer membrane protein assembly complex, YaeT protein
PDDFDHOE_01847 4.49e-178 uppS 2.5.1.31 - H ko:K00806 ko00900,ko01110,map00900,map01110 ko00000,ko00001,ko01000,ko01006 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
PDDFDHOE_01848 0.0 - - - G - - - COG NOG27066 non supervised orthologous group
PDDFDHOE_01849 8.29e-246 ribD 1.1.1.193, 3.5.4.26 - H ko:K11752 ko00740,ko01100,ko01110,ko02024,map00740,map01100,map01110,map02024 ko00000,ko00001,ko00002,ko01000 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
PDDFDHOE_01850 3.44e-199 prmC 2.1.1.297 - J ko:K02493 - ko00000,ko01000,ko03012 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
PDDFDHOE_01851 2.48e-111 recX - - S ko:K03565 - ko00000,ko03400 Modulates RecA activity
PDDFDHOE_01852 2.15e-151 pyrE 2.4.2.10, 4.1.1.23 - F ko:K00762,ko:K13421 ko00240,ko00983,ko01100,map00240,map00983,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
PDDFDHOE_01853 1.52e-89 - - - S - - - Polyketide cyclase / dehydrase and lipid transport
PDDFDHOE_01854 0.0 argH 4.3.2.1 - E ko:K01755 ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,map00220,map00250,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000,ko04147 Psort location Cytoplasmic, score
PDDFDHOE_01857 6.4e-301 - - - E - - - FAD dependent oxidoreductase
PDDFDHOE_01858 4.52e-37 - - - - - - - -
PDDFDHOE_01859 2.84e-18 - - - - - - - -
PDDFDHOE_01861 4.22e-60 - - - - - - - -
PDDFDHOE_01862 5.2e-294 - - - S ko:K07133 - ko00000 AAA domain
PDDFDHOE_01863 1.45e-257 argE 3.5.1.16 - E ko:K01438 ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 COG0624 Acetylornithine deacetylase Succinyl-diaminopimelate desuccinylase and related
PDDFDHOE_01864 0.0 fadD 6.2.1.3 - I ko:K01897 ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920 ko00000,ko00001,ko00002,ko01000,ko01004,ko04147 AMP-binding enzyme
PDDFDHOE_01865 0.0 - - - S - - - Peptidase M16 inactive domain
PDDFDHOE_01866 1.82e-226 prfB - - J ko:K02836 - ko00000,ko03012 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
PDDFDHOE_01867 2.39e-18 - - - - - - - -
PDDFDHOE_01868 9.38e-256 - - - P - - - phosphate-selective porin
PDDFDHOE_01869 5.46e-108 cyaA 4.6.1.1 - S ko:K01768 ko00230,ko02025,ko04113,ko04213,map00230,map02025,map04113,map04213 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score 8.96
PDDFDHOE_01870 2.79e-293 - - - S - - - Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_01871 1.98e-65 - - - K - - - sequence-specific DNA binding
PDDFDHOE_01872 5.64e-242 - 2.7.11.1 - S ko:K07154 - ko00000,ko01000,ko01001,ko02048 Psort location Cytoplasmic, score 8.96
PDDFDHOE_01873 1.62e-189 - - - - - - - -
PDDFDHOE_01874 0.0 - - - P - - - Psort location OuterMembrane, score
PDDFDHOE_01875 4.21e-224 - - - S - - - Endonuclease Exonuclease phosphatase family
PDDFDHOE_01876 5.72e-200 - - - F ko:K01173 ko04210,map04210 ko00000,ko00001,ko03029 DNA/RNA non-specific endonuclease
PDDFDHOE_01877 9.64e-317 - - - - - - - -
PDDFDHOE_01878 1.6e-81 - - - - - - - -
PDDFDHOE_01879 7.3e-212 - - - I - - - Carboxylesterase family
PDDFDHOE_01880 0.0 - - - M - - - Sulfatase
PDDFDHOE_01881 0.0 - - - GM ko:K21572 - ko00000,ko02000 COG NOG26302 non supervised orthologous group
PDDFDHOE_01882 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PDDFDHOE_01883 1.55e-254 - - - - - - - -
PDDFDHOE_01884 0.0 - 3.1.6.1 - P ko:K01130 ko00140,ko00600,map00140,map00600 ko00000,ko00001,ko01000 COG COG3119 Arylsulfatase A and related enzymes
PDDFDHOE_01885 0.0 - 3.1.6.1 - P ko:K01130 ko00140,ko00600,map00140,map00600 ko00000,ko00001,ko01000 COG COG3119 Arylsulfatase A and related enzymes
PDDFDHOE_01886 8.27e-253 abnA - - G - - - Belongs to the glycosyl hydrolase 43 family
PDDFDHOE_01887 0.0 - - - P - - - Psort location Cytoplasmic, score
PDDFDHOE_01888 1.05e-252 - - - - - - - -
PDDFDHOE_01889 0.0 - - - - - - - -
PDDFDHOE_01890 0.0 - - - O ko:K06889 - ko00000 COG COG1073 Hydrolases of the alpha beta superfamily
PDDFDHOE_01891 2.77e-270 araJ - - EGP ko:K08156 - ko00000,ko02000 Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_01892 1.34e-259 ychF - - J ko:K06942 - ko00000,ko03009 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
PDDFDHOE_01893 9.84e-207 panE 1.1.1.169 - H ko:K00077 ko00770,ko01100,ko01110,map00770,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
PDDFDHOE_01894 8.22e-213 lgt - - M - - - Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
PDDFDHOE_01895 3.87e-155 - 2.3.1.28 - V ko:K19271 - br01600,ko00000,ko01000,ko01504 COG4845 Chloramphenicol O-acetyltransferase
PDDFDHOE_01896 0.0 - - - S - - - MAC/Perforin domain
PDDFDHOE_01897 0.0 mutS - - L ko:K03555 ko03430,map03430 ko00000,ko00001,ko03400 that it carries out the mismatch recognition step. This protein has a weak ATPase activity
PDDFDHOE_01898 3.47e-209 rhaR_1 - - K - - - transcriptional regulator (AraC family)
PDDFDHOE_01899 6.91e-201 eamA - - EG - - - Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_01900 0.0 - 3.1.1.53 - G ko:K05970 - ko00000,ko01000 COG NOG04984 non supervised orthologous group
PDDFDHOE_01902 0.0 leuS 6.1.1.4 - J ko:K01869 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Belongs to the class-I aminoacyl-tRNA synthetase family
PDDFDHOE_01903 4.24e-218 - - - S - - - Psort location CytoplasmicMembrane, score
PDDFDHOE_01904 1.48e-135 rdgB 3.6.1.66 - F ko:K02428 ko00230,map00230 ko00000,ko00001,ko01000 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
PDDFDHOE_01905 5.39e-188 - - - N ko:K02557 ko02030,ko02040,map02030,map02040 ko00000,ko00001,ko02000,ko02035 COG COG1360 Flagellar motor protein
PDDFDHOE_01906 0.0 - - - G - - - Alpha-1,2-mannosidase
PDDFDHOE_01907 0.0 - 3.2.1.22 - G ko:K07407 ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603 ko00000,ko00001,ko01000 alpha-galactosidase
PDDFDHOE_01908 0.0 - 3.1.1.53 - G ko:K05970 - ko00000,ko01000 Glycosyl hydrolase family 2, sugar binding domain protein
PDDFDHOE_01909 0.0 - 3.2.1.22 - G ko:K07407 ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603 ko00000,ko00001,ko01000 alpha-galactosidase
PDDFDHOE_01910 0.0 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
PDDFDHOE_01911 0.0 - 3.2.1.51 GH95 G ko:K15923 ko00511,map00511 ko00000,ko00001,ko01000 Glycosyl hydrolase family 65, N-terminal domain
PDDFDHOE_01913 0.0 - - - H - - - TonB-linked outer membrane protein, SusC RagA family
PDDFDHOE_01914 0.0 - - - P ko:K21572 - ko00000,ko02000 non supervised orthologous group
PDDFDHOE_01915 7.47e-302 - - - S - - - Domain of unknown function (DUF5126)
PDDFDHOE_01916 0.0 - - - S - - - Domain of unknown function
PDDFDHOE_01917 0.0 - - - M - - - Right handed beta helix region
PDDFDHOE_01918 1.51e-161 - - - E - - - GDSL-like Lipase/Acylhydrolase
PDDFDHOE_01919 8.55e-216 - 3.1.4.46 - C ko:K01126 ko00564,map00564 ko00000,ko00001,ko01000 COG0584 Glycerophosphoryl diester phosphodiesterase
PDDFDHOE_01920 0.0 - 3.2.1.20 GH31 E ko:K01187 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 Glycosyl-hydrolase 97 C-terminal, oligomerisation
PDDFDHOE_01921 4.29e-226 nadA 2.5.1.72 - H ko:K03517 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
PDDFDHOE_01923 4.01e-122 spoU - - J - - - RNA methylase, SpoU family K00599
PDDFDHOE_01924 2.84e-126 - - - S - - - COG NOG14459 non supervised orthologous group
PDDFDHOE_01925 0.0 - - - L - - - Psort location OuterMembrane, score
PDDFDHOE_01926 3.86e-190 - - - C - - - radical SAM domain protein
PDDFDHOE_01927 0.0 - - - P - - - Psort location Cytoplasmic, score
PDDFDHOE_01928 0.0 - 3.2.1.20 GH31 G ko:K01187 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 31 family
PDDFDHOE_01929 0.0 - 3.1.1.53 - S ko:K05970 - ko00000,ko01000 Carbohydrate esterase, sialic acid-specific acetylesterase
PDDFDHOE_01930 8.24e-270 - - - S - - - COGs COG4299 conserved
PDDFDHOE_01931 0.0 sulP - - P ko:K03321 - ko00000,ko02000 Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_01932 3.5e-138 rbr - - C - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_01933 2.28e-58 - - - S - - - Domain of unknown function (DUF4884)
PDDFDHOE_01934 0.0 nadB 1.4.3.16 - H ko:K00278 ko00250,ko00760,ko01100,map00250,map00760,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the oxidation of L-aspartate to iminoaspartate
PDDFDHOE_01935 4.97e-79 - - - S - - - COG NOG29403 non supervised orthologous group
PDDFDHOE_01936 4.86e-314 lpdA 1.8.1.4 - C ko:K00382 ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200 br01601,ko00000,ko00001,ko00002,ko01000,ko04147 COG1249 Pyruvate 2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3)
PDDFDHOE_01937 0.0 dacB 3.4.16.4 - M ko:K07259 ko00550,map00550 ko00000,ko00001,ko01000,ko01002,ko01011 COG2027 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4)
PDDFDHOE_01938 2.02e-290 - - - S - - - PFAM Formylglycine-generating sulfatase enzyme
PDDFDHOE_01939 9.67e-317 - - - S - - - PFAM Formylglycine-generating sulfatase enzyme
PDDFDHOE_01940 1.07e-136 - - - K ko:K03088 - ko00000,ko03021 Sigma-70, region 4
PDDFDHOE_01941 1.88e-136 - - - - - - - -
PDDFDHOE_01942 0.0 scpC 2.8.3.18, 3.1.2.1 - C ko:K01067,ko:K18118 ko00020,ko00620,ko00650,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00620,map00650,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 COG0427 Acetyl-CoA hydrolase
PDDFDHOE_01943 2.5e-75 - - - - - - - -
PDDFDHOE_01944 0.0 miaB 2.8.4.3 - J ko:K06168 - ko00000,ko01000,ko03016 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
PDDFDHOE_01945 6.88e-169 - - - K - - - Bacteriophage CI repressor helix-turn-helix domain
PDDFDHOE_01946 8.44e-70 - - - - - - - -
PDDFDHOE_01947 7.28e-213 - - - L - - - Domain of unknown function (DUF4373)
PDDFDHOE_01948 6.19e-109 - - - L - - - COG NOG31286 non supervised orthologous group
PDDFDHOE_01949 6.46e-126 - 3.5.1.28 - V ko:K01447 - ko00000,ko01000 Psort location Cytoplasmic, score 8.96
PDDFDHOE_01950 6.21e-12 - - - - - - - -
PDDFDHOE_01951 0.0 - - - M - - - COG3209 Rhs family protein
PDDFDHOE_01952 0.0 - - - M - - - COG COG3209 Rhs family protein
PDDFDHOE_01954 8.07e-173 - - - M - - - JAB-like toxin 1
PDDFDHOE_01955 3.98e-256 - - - S - - - Immunity protein 65
PDDFDHOE_01956 9.9e-197 - - - M - - - COG COG3209 Rhs family protein
PDDFDHOE_01957 5.91e-46 - - - - - - - -
PDDFDHOE_01958 4.11e-222 - - - H - - - Methyltransferase domain protein
PDDFDHOE_01959 2.03e-194 ftsX - - D ko:K09811 ko02010,map02010 ko00000,ko00001,ko00002,ko02000,ko03036 Belongs to the ABC-4 integral membrane protein family. FtsX subfamily
PDDFDHOE_01960 2.06e-46 fjo13 - - S - - - COG NOG19122 non supervised orthologous group
PDDFDHOE_01961 9.72e-183 uppP 3.6.1.27 - V ko:K06153 ko00550,map00550 ko00000,ko00001,ko01000,ko01011 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
PDDFDHOE_01962 4.32e-174 truB 5.4.99.25 - J ko:K03177 - ko00000,ko01000,ko03016 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
PDDFDHOE_01963 2.31e-257 queA 2.4.99.17 - H ko:K07568 - ko00000,ko01000,ko03016 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
PDDFDHOE_01964 3.49e-83 - - - - - - - -
PDDFDHOE_01965 7.97e-108 folK 2.7.6.3 - H ko:K00950 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko00002,ko01000 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase
PDDFDHOE_01966 5.32e-36 - - - - - - - -
PDDFDHOE_01968 2.28e-308 metK 2.5.1.6 - H ko:K00789 ko00270,ko01100,ko01110,ko01230,map00270,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
PDDFDHOE_01969 5.18e-229 - - - G - - - Histidine acid phosphatase
PDDFDHOE_01970 0.0 - 3.2.1.52 GH20 G ko:K12373 ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142 ko00000,ko00001,ko00002,ko01000,ko03110 Glycosyl hydrolase family 20, catalytic domain
PDDFDHOE_01971 0.0 - 3.2.1.51 GH95 G ko:K15923 ko00511,map00511 ko00000,ko00001,ko01000 COG NOG04001 non supervised orthologous group
PDDFDHOE_01973 0.0 - 3.1.6.1 - P ko:K01130 ko00140,ko00600,map00140,map00600 ko00000,ko00001,ko01000 COG COG3119 Arylsulfatase A and related enzymes
PDDFDHOE_01974 0.0 - 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 2 family
PDDFDHOE_01975 0.0 - - - S ko:K21572 - ko00000,ko02000 SusD family
PDDFDHOE_01976 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PDDFDHOE_01977 1.96e-169 - - - PT - - - Sigma factor regulatory protein, FecR PupR family
PDDFDHOE_01978 9.23e-102 - - - K ko:K03088 - ko00000,ko03021 Sigma-70, region 4
PDDFDHOE_01980 1.41e-243 - - - M ko:K16052 - ko00000,ko02000 Mechanosensitive ion channel
PDDFDHOE_01981 0.0 - 3.2.1.41 CBM48,GH13 G ko:K01200 ko00500,ko01100,ko01110,map00500,map01100,map01110 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 13 family
PDDFDHOE_01982 0.0 amyS 3.2.1.1 GH13 G ko:K01176 ko00500,ko01100,ko04973,map00500,map01100,map04973 ko00000,ko00001,ko01000 Alpha-amylase domain
PDDFDHOE_01983 4.67e-232 rlmF 2.1.1.181 - J ko:K06970 - ko00000,ko01000,ko03009 Specifically methylates the adenine in position 1618 of 23S rRNA
PDDFDHOE_01984 0.0 - - - - - - - -
PDDFDHOE_01985 6.62e-256 - - - M ko:K15727 - ko00000,ko02000 Barrel-sandwich domain of CusB or HlyD membrane-fusion
PDDFDHOE_01986 0.0 - - - P ko:K15726 - ko00000,ko02000 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PDDFDHOE_01987 1.12e-285 czcC_2 - - MU ko:K15725 - ko00000,ko02000 Outer membrane efflux protein
PDDFDHOE_01988 4.51e-188 - - - M - - - COG NOG10981 non supervised orthologous group
PDDFDHOE_01989 0.0 - - - K - - - COG NOG18216 non supervised orthologous group
PDDFDHOE_01990 1.27e-87 - - - S - - - Protein of unknown function, DUF488
PDDFDHOE_01991 8.32e-294 ydiI 3.1.2.28 - Q ko:K19222 ko00130,ko01100,ko01110,map00130,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score 8.96
PDDFDHOE_01992 7.11e-277 entC 5.4.4.2 - HQ ko:K02361,ko:K02552 ko00130,ko01053,ko01100,ko01110,ko01130,map00130,map01053,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Isochorismate synthase
PDDFDHOE_01993 0.0 menD 2.2.1.9 - H ko:K02551 ko00130,ko01100,ko01110,map00130,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
PDDFDHOE_01994 6.93e-197 menB 4.1.3.36 - H ko:K01661 ko00130,ko01100,ko01110,map00130,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
PDDFDHOE_01995 2.92e-259 menC - - M - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_01996 8.78e-263 menE 6.2.1.26 - IQ ko:K01911 ko00130,ko01100,ko01110,map00130,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score 8.96
PDDFDHOE_01997 3e-133 - - - K ko:K03088 - ko00000,ko03021 RNA polymerase sigma-70 factor, ECF subfamily
PDDFDHOE_01998 8.86e-218 - - - PT - - - Sigma factor regulatory protein, FecR PupR family
PDDFDHOE_01999 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PDDFDHOE_02000 0.0 - - - S - - - Susd and RagB outer membrane lipoprotein
PDDFDHOE_02001 3.07e-240 - - - G - - - Putative glycoside hydrolase Family 18, chitinase_18
PDDFDHOE_02002 7.69e-295 - - - S - - - Concanavalin A-like lectin/glucanases superfamily
PDDFDHOE_02003 7.6e-218 - - - S - - - Domain of unknown function (DUF1735)
PDDFDHOE_02004 5.2e-178 - - - S - - - Protein of unknown function (DUF1573)
PDDFDHOE_02005 0.0 - 3.2.1.51 GH29 G ko:K01206 ko00511,map00511 ko00000,ko00001,ko01000,ko04147 F5 8 type C domain protein
PDDFDHOE_02006 0.0 - 3.2.1.21 GH3 G ko:K05349 ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110 ko00000,ko00001,ko01000 glycosyl hydrolase, family 3
PDDFDHOE_02007 1.8e-78 dps - - P ko:K04047 - ko00000,ko03036 Belongs to the Dps family
PDDFDHOE_02008 1.95e-220 oxyR - - K ko:K04761 ko02026,map02026 ko00000,ko00001,ko03000 Psort location Cytoplasmic, score 9.97
PDDFDHOE_02009 6.53e-220 - - - EG - - - Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_02010 6.59e-151 aqpZ - - G ko:K06188 - ko00000,ko02000 Belongs to the MIP aquaporin (TC 1.A.8) family
PDDFDHOE_02011 3.52e-166 - - - S - - - COG NOG31568 non supervised orthologous group
PDDFDHOE_02012 1.82e-126 - - - K ko:K03088 - ko00000,ko03021 Belongs to the sigma-70 factor family. ECF subfamily
PDDFDHOE_02013 7.98e-292 - - - K - - - Outer membrane protein beta-barrel domain
PDDFDHOE_02015 1.9e-282 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_02016 0.0 - - - G - - - Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
PDDFDHOE_02017 1.79e-91 rplI - - J ko:K02939 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 binds to the 23S rRNA
PDDFDHOE_02018 3.78e-57 rpsR - - J ko:K02963 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
PDDFDHOE_02019 8.84e-74 rpsF - - J ko:K02990 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011,ko03029 Binds together with S18 to 16S ribosomal RNA
PDDFDHOE_02020 1.59e-99 ohrR - - K - - - Transcriptional regulator, MarR family
PDDFDHOE_02021 3.98e-29 - - - - - - - -
PDDFDHOE_02022 2.14e-166 rprY - - K - - - COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PDDFDHOE_02023 0.0 rprX 2.7.13.3 - T ko:K07636 ko02020,map02020 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 two-component regulatory system, sensor kinase protein
PDDFDHOE_02024 0.0 fusA2 - - J ko:K02355 - ko00000,ko03012,ko03029 Psort location Cytoplasmic, score 9.26
PDDFDHOE_02025 1.33e-275 hemN - - H - - - Involved in the biosynthesis of porphyrin-containing compound
PDDFDHOE_02026 3.11e-118 - - - K ko:K03088 - ko00000,ko03021 RNA polymerase sigma-70 factor
PDDFDHOE_02027 2.57e-94 - - - - - - - -
PDDFDHOE_02028 3.54e-198 - - - PT - - - Domain of unknown function (DUF4974)
PDDFDHOE_02029 0.0 - - - P - - - TonB-dependent receptor
PDDFDHOE_02030 1.14e-144 - - - S - - - COG NOG27441 non supervised orthologous group
PDDFDHOE_02031 1.89e-57 - - - S - - - COG NOG18433 non supervised orthologous group
PDDFDHOE_02032 1.65e-141 - - - S - - - Psort location CytoplasmicMembrane, score
PDDFDHOE_02033 7.15e-75 - - - S - - - COG NOG30654 non supervised orthologous group
PDDFDHOE_02034 3.38e-251 - - - L - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_02035 1.89e-159 - - - S ko:K07025 - ko00000 Psort location Cytoplasmic, score 8.96
PDDFDHOE_02036 3.88e-104 - - - K - - - helix_turn_helix, Lux Regulon
PDDFDHOE_02037 7.86e-208 - - - L - - - D12 class N6 adenine-specific DNA methyltransferase
PDDFDHOE_02038 4.52e-154 thyA 2.1.1.45 - F ko:K00560 ko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score
PDDFDHOE_02039 2.65e-48 - - - - - - - -
PDDFDHOE_02040 2.57e-118 - - - - - - - -
PDDFDHOE_02041 5.87e-313 - - - L - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_02042 5.41e-43 - - - - - - - -
PDDFDHOE_02043 0.0 - - - - - - - -
PDDFDHOE_02044 0.0 - - - S - - - Phage minor structural protein
PDDFDHOE_02045 6.41e-111 - - - - - - - -
PDDFDHOE_02046 0.0 - - - D - - - protein involved in control of spindle dynamics together with kar3p K00870
PDDFDHOE_02047 7.63e-112 - - - - - - - -
PDDFDHOE_02048 1.61e-131 - - - - - - - -
PDDFDHOE_02049 1.58e-72 - - - - - - - -
PDDFDHOE_02050 7.65e-101 - - - - - - - -
PDDFDHOE_02051 1.14e-87 - - - S - - - Psort location CytoplasmicMembrane, score
PDDFDHOE_02052 4.01e-114 - - - V - - - N-acetylmuramoyl-L-alanine amidase
PDDFDHOE_02053 3.21e-285 - - - - - - - -
PDDFDHOE_02054 2.22e-257 - - - OU - - - Psort location Cytoplasmic, score
PDDFDHOE_02055 3.75e-98 - - - - - - - -
PDDFDHOE_02056 0.0 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_02057 2.59e-97 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_02058 0.0 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_02059 0.0 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_02060 1.67e-57 - - - - - - - -
PDDFDHOE_02061 1.57e-143 - - - S - - - Phage virion morphogenesis
PDDFDHOE_02062 6.01e-104 - - - - - - - -
PDDFDHOE_02063 1.88e-62 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_02065 1.9e-147 - - - S - - - Protein of unknown function (DUF3164)
PDDFDHOE_02066 5.55e-95 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_02067 2.02e-26 - - - - - - - -
PDDFDHOE_02068 3.8e-39 - - - - - - - -
PDDFDHOE_02069 1.65e-123 - - - - - - - -
PDDFDHOE_02070 4.85e-65 - - - - - - - -
PDDFDHOE_02071 5.16e-217 - - - - - - - -
PDDFDHOE_02072 3.9e-58 - - - L - - - The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
PDDFDHOE_02073 4.02e-167 - - - O - - - ATP-dependent serine protease
PDDFDHOE_02074 1.08e-96 - - - - - - - -
PDDFDHOE_02075 8.17e-208 - 3.6.1.3 - S ko:K07132 - ko00000,ko01000 AAA domain
PDDFDHOE_02076 0.0 - - - L - - - Transposase and inactivated derivatives
PDDFDHOE_02077 1.95e-41 - - - - - - - -
PDDFDHOE_02078 3.36e-38 - - - - - - - -
PDDFDHOE_02080 1.7e-41 - - - - - - - -
PDDFDHOE_02081 2.32e-90 - - - - - - - -
PDDFDHOE_02082 0.0 kdpA 3.6.3.12 - P ko:K01546 ko02020,map02020 ko00000,ko00001,ko01000 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
PDDFDHOE_02083 0.0 kdpB 3.6.3.12 - P ko:K01547 ko02020,map02020 ko00000,ko00001,ko01000 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
PDDFDHOE_02084 8.25e-131 kdpC 3.6.3.12 - P ko:K01548 ko02020,map02020 ko00000,ko00001,ko01000 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
PDDFDHOE_02085 1.29e-179 - - - S - - - COG NOG26951 non supervised orthologous group
PDDFDHOE_02086 4.73e-265 kdpD 2.7.13.3 - T ko:K07646 ko02020,map02020 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Psort location Cytoplasmic, score 8.96
PDDFDHOE_02087 0.0 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
PDDFDHOE_02088 9.56e-317 - 6.3.5.2 - F ko:K01951 ko00230,ko00983,ko01100,map00230,map00983,map01100 ko00000,ko00001,ko00002,ko01000,ko01002 Psort location Cytoplasmic, score
PDDFDHOE_02090 5.89e-90 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_02091 0.0 - - - S ko:K07091 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Permease, YjgP YjgQ family
PDDFDHOE_02092 3.66e-294 ribBA 3.5.4.25, 4.1.99.12 - H ko:K14652 ko00740,ko00790,ko01100,ko01110,map00740,map00790,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
PDDFDHOE_02093 5.97e-285 aspC 2.6.1.1 - E ko:K00812 ko00220,ko00250,ko00270,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko01000,ko01007 COG0436 Aspartate tyrosine aromatic aminotransferase
PDDFDHOE_02094 3.02e-21 - - - C - - - 4Fe-4S binding domain
PDDFDHOE_02095 1.28e-228 metAA 2.3.1.46 - E ko:K00651 ko00270,ko00920,ko01100,ko01110,ko01230,map00270,map00920,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
PDDFDHOE_02096 0.0 prtQ - - O ko:K08303 ko05120,map05120 ko00000,ko00001,ko01000,ko01002 Psort location Cytoplasmic, score 8.96
PDDFDHOE_02097 2.57e-250 - - - S - - - Psort location CytoplasmicMembrane, score
PDDFDHOE_02098 4.6e-122 - - - K - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_02099 0.0 - - - P - - - Outer membrane receptor
PDDFDHOE_02100 4.54e-138 - - - K - - - COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
PDDFDHOE_02101 0.0 - - - S ko:K07137 - ko00000 FAD-dependent
PDDFDHOE_02102 0.0 radA - - O ko:K04485 - ko00000,ko03400 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
PDDFDHOE_02103 3.93e-291 - - - S ko:K07133 - ko00000 AAA domain
PDDFDHOE_02104 2.73e-241 ansA 3.5.1.1 - EJ ko:K01424 ko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110 ko00000,ko00001,ko01000 L-asparaginase, type I
PDDFDHOE_02105 0.0 thrA 1.1.1.3, 2.7.2.4 - E ko:K12524 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 homoserine dehydrogenase
PDDFDHOE_02106 1.35e-302 - 5.4.2.12 - G ko:K15635 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 homoserine kinase
PDDFDHOE_02107 1.33e-313 thrC 4.2.3.1 - E ko:K01733 ko00260,ko00750,ko01100,ko01110,ko01120,ko01230,map00260,map00750,map01100,map01110,map01120,map01230 ko00000,ko00001,ko00002,ko01000 Threonine synthase
PDDFDHOE_02108 7.36e-139 tag 3.2.2.20 - L ko:K01246 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 COG COG2818 3-methyladenine DNA glycosylase
PDDFDHOE_02109 1.58e-146 thiN 2.7.6.2 - H ko:K00949 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko01000 Thiamine diphosphokinase
PDDFDHOE_02110 9.66e-138 pnuC - - H ko:K03811 - ko00000,ko02000 nicotinamide mononucleotide transporter
PDDFDHOE_02111 2.96e-210 - - - S - - - Domain of unknown function (DUF4361)
PDDFDHOE_02112 0.0 - - - P ko:K21572 - ko00000,ko02000 Psort location OuterMembrane, score
PDDFDHOE_02113 0.0 - - - P - - - TonB dependent receptor
PDDFDHOE_02114 0.0 - - - S - - - NHL repeat
PDDFDHOE_02115 0.0 - - - T - - - Y_Y_Y domain
PDDFDHOE_02116 0.0 - - - P ko:K02014 - ko00000,ko02000 COG COG1629 Outer membrane receptor proteins, mostly Fe transport
PDDFDHOE_02117 2.82e-206 mscS - - M ko:K03442 - ko00000,ko02000 Small-conductance mechanosensitive channel
PDDFDHOE_02118 7.33e-50 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_02119 8.28e-310 metY 2.5.1.49 - E ko:K01740 ko00270,ko01100,map00270,map01100 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score
PDDFDHOE_02120 2.81e-106 lrp - - K ko:K03719,ko:K05800 - ko00000,ko03000,ko03036 Transcriptional regulator, AsnC family
PDDFDHOE_02121 1.41e-208 - 2.1.1.266 - S ko:K07115 - ko00000,ko01000,ko03009 COG COG2961 Protein involved in catabolism of external DNA
PDDFDHOE_02122 3.72e-145 vat_2 - - S ko:K18234 - ko00000,ko01000,ko01504 Bacterial transferase hexapeptide repeat protein
PDDFDHOE_02123 3.27e-138 - - - S - - - Bacterial transferase hexapeptide (six repeats)
PDDFDHOE_02124 0.0 - - - G - - - Belongs to the glycosyl hydrolase 28 family
PDDFDHOE_02125 1.02e-311 mepA_6 - - V - - - MATE efflux family protein
PDDFDHOE_02126 4.75e-99 - - - K - - - Protein of unknown function (DUF3788)
PDDFDHOE_02129 2.84e-61 - - - - - - - -
PDDFDHOE_02130 5.75e-266 - - - S - - - SPFH domain-Band 7 family
PDDFDHOE_02132 4.93e-135 - - - L - - - Phage integrase family
PDDFDHOE_02133 1.28e-62 - - - S - - - WYL_2, Sm-like SH3 beta-barrel fold
PDDFDHOE_02134 1.36e-30 - - - - - - - -
PDDFDHOE_02135 1.22e-54 - - - K - - - Helix-turn-helix domain
PDDFDHOE_02136 6.98e-63 - - - - - - - -
PDDFDHOE_02138 8.98e-96 - - - L - - - Belongs to the 'phage' integrase family
PDDFDHOE_02139 9.33e-48 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_02140 1.05e-132 yvqK 2.5.1.17 - S ko:K00798 ko00860,ko01100,map00860,map01100 ko00000,ko00001,ko00002,ko01000 Conserved protein
PDDFDHOE_02141 5.28e-152 - - - S - - - COG NOG23394 non supervised orthologous group
PDDFDHOE_02142 1.74e-153 - - - M ko:K03832 - ko00000,ko02000 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
PDDFDHOE_02143 0.0 - - - S - - - Domain of unknonw function from B. Theta Gene description (DUF3874)
PDDFDHOE_02144 1.06e-258 - - - S - - - UPF0283 membrane protein
PDDFDHOE_02145 0.0 - - - S - - - Dynamin family
PDDFDHOE_02146 3.3e-122 - - - S - - - protein trimerization
PDDFDHOE_02147 1.25e-285 - - - S ko:K07148 - ko00000 Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_02148 0.0 - - - L - - - Belongs to the 'phage' integrase family
PDDFDHOE_02149 1.01e-221 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_02150 1.6e-247 - - - I - - - Toxin-antitoxin system, toxin component, Fic domain protein
PDDFDHOE_02151 1.21e-69 - - - L - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_02152 1.3e-304 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_02153 2.95e-77 - - - - - - - -
PDDFDHOE_02154 0.0 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_02155 2.06e-183 - - - L - - - Topoisomerase DNA binding C4 zinc finger
PDDFDHOE_02156 8.34e-165 - - - - - - - -
PDDFDHOE_02157 1.24e-127 - - - - - - - -
PDDFDHOE_02158 1.64e-162 - - - - - - - -
PDDFDHOE_02159 1.71e-100 - - - - - - - -
PDDFDHOE_02160 3.32e-203 - - - - - - - -
PDDFDHOE_02162 8.46e-264 manC 2.7.7.13 - M ko:K00971 ko00051,ko00520,ko01100,ko01110,map00051,map00520,map01100,map01110 ko00000,ko00001,ko00002,ko01000 mannose-1-phosphate guanylyltransferase
PDDFDHOE_02163 0.0 - - - IQ ko:K00666 - ko00000,ko01000,ko01004 Psort location Cytoplasmic, score 9.97
PDDFDHOE_02164 2.75e-130 - - - K - - - Psort location Cytoplasmic, score
PDDFDHOE_02165 1.68e-55 rpsO - - J ko:K02956 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
PDDFDHOE_02166 0.0 typA - - T ko:K06207 - ko00000 GTP-binding protein TypA
PDDFDHOE_02167 9.4e-316 - - - L - - - COG0249 Mismatch repair ATPase (MutS family)
PDDFDHOE_02168 1.24e-120 - - - P ko:K07240 - ko00000,ko02000 Psort location CytoplasmicMembrane, score
PDDFDHOE_02169 1e-120 - - - P ko:K07240 - ko00000,ko02000 Psort location CytoplasmicMembrane, score
PDDFDHOE_02170 0.0 pckA 4.1.1.49 - H ko:K01610 ko00010,ko00020,ko00620,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00710,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
PDDFDHOE_02171 2.32e-153 upp 2.4.2.9 - F ko:K00761 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko01000 uracil phosphoribosyltransferase
PDDFDHOE_02172 9.82e-175 - - - K - - - methylphosphotriester-DNA alkyltransferase and transcriptional regulator (AraC XylS family)
PDDFDHOE_02173 0.0 - - - EGP - - - Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_02174 1.08e-247 - - - V ko:K03543 - ko00000,ko00002,ko02000 Auxiliary transport protein, membrane fusion protein (MFP) family protein
PDDFDHOE_02175 0.0 - - - MU - - - Psort location OuterMembrane, score
PDDFDHOE_02176 0.0 - - - S - - - Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_02177 0.0 ahcY 3.3.1.1 - H ko:K01251 ko00270,ko01100,map00270,map01100 ko00000,ko00001,ko00002,ko01000,ko01009,ko04147 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
PDDFDHOE_02178 0.0 - - - T - - - Psort location CytoplasmicMembrane, score 7.88
PDDFDHOE_02179 0.0 prc 3.4.21.102 - M ko:K03797 - ko00000,ko01000,ko01002 Belongs to the peptidase S41A family
PDDFDHOE_02180 2.22e-232 - - - G - - - Kinase, PfkB family
PDDFDHOE_02183 1.19e-168 - - - - - - - -
PDDFDHOE_02184 4.34e-167 - - - - - - - -
PDDFDHOE_02185 0.0 - - - M - - - O-antigen ligase like membrane protein
PDDFDHOE_02186 1.52e-286 mro_1 5.1.3.3 - G ko:K01785 ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130 ko00000,ko00001,ko00002,ko01000 Converts alpha-aldose to the beta-anomer
PDDFDHOE_02187 0.0 - - - S - - - protein conserved in bacteria
PDDFDHOE_02188 0.0 - - - G - - - Glycosyl hydrolase family 92
PDDFDHOE_02189 8.77e-286 mro_1 5.1.3.3 - G ko:K01785 ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130 ko00000,ko00001,ko00002,ko01000 Converts alpha-aldose to the beta-anomer
PDDFDHOE_02190 0.0 - - - S ko:K09704 - ko00000 Conserved protein
PDDFDHOE_02191 0.0 - - - G - - - Glycosyl hydrolase family 92
PDDFDHOE_02192 0.0 - - - G - - - COG NOG09951 non supervised orthologous group
PDDFDHOE_02193 0.0 - - - S - - - COG NOG26804 non supervised orthologous group
PDDFDHOE_02194 3.38e-314 - - - M - - - Glycosyl hydrolase family 76
PDDFDHOE_02195 0.0 - - - G - - - Belongs to the glycosyl hydrolase 43 family
PDDFDHOE_02196 1.32e-288 - - - G - - - Belongs to the glycosyl hydrolase 43 family
PDDFDHOE_02197 0.0 - - - S - - - COG NOG06097 non supervised orthologous group
PDDFDHOE_02198 0.0 - - - G - - - Belongs to the glycosyl hydrolase 2 family
PDDFDHOE_02199 0.0 - - - G - - - COG NOG09951 non supervised orthologous group
PDDFDHOE_02200 1.35e-107 - - - S - - - Protein of unknown function (DUF3828)
PDDFDHOE_02201 2.91e-72 - - - - - - - -
PDDFDHOE_02202 3.57e-129 - - - S - - - Tetratricopeptide repeat
PDDFDHOE_02203 0.0 - - - S - - - TonB-dependent Receptor Plug Domain
PDDFDHOE_02204 1.64e-262 - - - S - - - Domain of unknown function (DUF4361)
PDDFDHOE_02205 0.0 - - - P ko:K21572 - ko00000,ko02000 SusD family
PDDFDHOE_02206 0.0 - - - P - - - TonB dependent receptor
PDDFDHOE_02207 0.0 - - - S - - - IPT/TIG domain
PDDFDHOE_02208 1.65e-128 - - - G - - - COG NOG09951 non supervised orthologous group
PDDFDHOE_02209 0.0 - - - S ko:K06921 - ko00000 ATPase (AAA superfamily)
PDDFDHOE_02210 0.0 - - - S - - - TonB-dependent Receptor Plug Domain
PDDFDHOE_02212 3.75e-172 - - - P ko:K21572 - ko00000,ko02000 Psort location OuterMembrane, score
PDDFDHOE_02213 0.0 - - - H - - - cobalamin-transporting ATPase activity
PDDFDHOE_02214 6.44e-61 - - - S - - - IPT/TIG domain
PDDFDHOE_02215 3.58e-99 - - - G - - - COG NOG09951 non supervised orthologous group
PDDFDHOE_02216 1.18e-271 wbpM - - GM - - - Polysaccharide biosynthesis protein
PDDFDHOE_02217 1.49e-308 ugd 1.1.1.22 - C ko:K00012 ko00040,ko00053,ko00520,ko01100,map00040,map00053,map00520,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the UDP-glucose GDP-mannose dehydrogenase family
PDDFDHOE_02218 1.8e-249 - 5.1.3.6 - M ko:K08679 ko00520,ko01100,map00520,map01100 ko00000,ko00001,ko01000 NAD dependent epimerase dehydratase family
PDDFDHOE_02219 5.91e-261 - 5.1.3.14 - G ko:K01791 ko00520,ko01100,ko05111,map00520,map01100,map05111 ko00000,ko00001,ko00002,ko01000,ko01005 UDP-N-acetylglucosamine 2-epimerase
PDDFDHOE_02220 2.02e-271 - 1.1.1.367 - GM ko:K19068 - ko00000,ko01000 NAD dependent epimerase dehydratase family
PDDFDHOE_02221 1.76e-230 fnlA 5.1.3.2 - M ko:K17716 ko00052,ko00520,ko01100,map00052,map00520,map01100 ko00000,ko00001,ko00002,ko01000 Polysaccharide biosynthesis protein
PDDFDHOE_02222 2.29e-255 - 5.1.3.14 - G ko:K01791 ko00520,ko01100,ko05111,map00520,map01100,map05111 ko00000,ko00001,ko00002,ko01000,ko01005 UDP-N-acetylglucosamine 2-epimerase
PDDFDHOE_02223 6.48e-09 - 2.3.1.30 - E ko:K00640 ko00270,ko00920,ko01100,ko01110,ko01120,ko01200,ko01230,ko05111,map00270,map00920,map01100,map01110,map01120,map01200,map01230,map05111 ko00000,ko00001,ko00002,ko01000 Bacterial transferase hexapeptide (six repeats)
PDDFDHOE_02224 4.65e-276 - 1.1.1.136, 1.1.1.336 - M ko:K02472,ko:K13015 ko00520,ko05111,map00520,map05111 ko00000,ko00001,ko01000,ko01005 Belongs to the UDP-glucose GDP-mannose dehydrogenase family
PDDFDHOE_02229 1.97e-221 - - - S - - - Polysaccharide biosynthesis protein
PDDFDHOE_02230 9.32e-139 - - - M ko:K07282 - ko00000 Bacterial capsule synthesis protein PGA_cap
PDDFDHOE_02231 3.94e-131 - - - M - - - TupA-like ATPgrasp
PDDFDHOE_02232 1.56e-72 - - - S - - - EpsG family
PDDFDHOE_02233 5.82e-101 - - - M - - - transferase activity, transferring glycosyl groups
PDDFDHOE_02234 1.08e-109 - 6.3.1.12 - F ko:K17810 - ko00000,ko01000 Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
PDDFDHOE_02235 6.8e-50 fmt 2.1.2.9 - J ko:K00604 ko00670,ko00970,map00670,map00970 ko00000,ko00001,ko01000 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
PDDFDHOE_02236 2.96e-12 - - - M - - - Glycosyl transferase 4-like domain
PDDFDHOE_02237 5.73e-107 - - - M - - - Psort location Cytoplasmic, score
PDDFDHOE_02238 2.8e-30 - 2.3.1.30 - E ko:K00640 ko00270,ko00920,ko01100,ko01110,ko01120,ko01200,ko01230,ko05111,map00270,map00920,map01100,map01110,map01120,map01200,map01230,map05111 ko00000,ko00001,ko00002,ko01000 Bacterial transferase hexapeptide (six repeats)
PDDFDHOE_02239 3.35e-56 - - - S - - - Bacterial transferase hexapeptide repeat protein
PDDFDHOE_02240 1.22e-210 - - - M - - - Glycosyl transferases group 1
PDDFDHOE_02241 5.68e-175 wcgX 2.7.8.33, 2.7.8.35 - M ko:K02851 - ko00000,ko01000,ko01003,ko01005 Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_02242 9.16e-108 - - - G - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_02245 2.96e-170 - - - M ko:K01991 ko02026,map02026 ko00000,ko00001,ko02000 COG1596 Periplasmic protein involved in polysaccharide export
PDDFDHOE_02246 0.0 - - - DM - - - Chain length determinant protein
PDDFDHOE_02247 1.24e-108 - - - L - - - COG NOG29624 non supervised orthologous group
PDDFDHOE_02248 1.93e-09 - - - - - - - -
PDDFDHOE_02249 1.33e-90 - - - T ko:K03803 - ko00000,ko03021 Positive regulator of sigma(E), RseC MucC
PDDFDHOE_02250 9.62e-177 rnfB - - C ko:K03616 - ko00000 electron transport complex, RnfABCDGE type, B subunit
PDDFDHOE_02251 0.0 rnfC - - C ko:K03615 - ko00000 Part of a membrane complex involved in electron transport
PDDFDHOE_02252 4.15e-233 rnfD - - C ko:K03614 - ko00000 Part of a membrane complex involved in electron transport
PDDFDHOE_02253 8.28e-152 rnfG - - C ko:K03612 - ko00000 Part of a membrane complex involved in electron transport
PDDFDHOE_02254 1.92e-127 rnfE - - C ko:K03613 - ko00000 Part of a membrane complex involved in electron transport
PDDFDHOE_02255 1.99e-118 rnfA - - C ko:K03617 - ko00000 Part of a membrane complex involved in electron transport
PDDFDHOE_02256 1.22e-248 galE 5.1.3.2 - M ko:K01784 ko00052,ko00520,ko01100,map00052,map00520,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the NAD(P)-dependent epimerase dehydratase family
PDDFDHOE_02257 1.93e-203 ispE 2.7.1.148 - F ko:K00919 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
PDDFDHOE_02258 0.0 dnaB 3.6.4.12 - L ko:K02314 ko03030,ko04112,map03030,map04112 ko00000,ko00001,ko01000,ko03032 Participates in initiation and elongation during chromosome replication
PDDFDHOE_02259 0.0 pheT 6.1.1.20 - J ko:K01890 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Psort location Cytoplasmic, score
PDDFDHOE_02260 1.98e-178 yebC - - K - - - Transcriptional regulatory protein
PDDFDHOE_02261 1.63e-56 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_02262 2.26e-286 mntH - - P ko:K03322 - ko00000,ko02000 Metal ion transporter, metal ion (Mn2 Fe2 ) transporter (Nramp) family
PDDFDHOE_02263 5.95e-192 xth 3.1.11.2 - L ko:K01142 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 Psort location Cytoplasmic, score 9.97
PDDFDHOE_02264 1.35e-102 - - - S - - - COG NOG16874 non supervised orthologous group
PDDFDHOE_02266 4.95e-40 - - - S - - - COG NOG33517 non supervised orthologous group
PDDFDHOE_02267 0.0 lepA - - M ko:K03596 ko05134,map05134 ko00000,ko00001 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
PDDFDHOE_02268 6.61e-270 - - - P - - - Psort location CytoplasmicMembrane, score
PDDFDHOE_02269 5.5e-300 nhaA - - P ko:K03313 - ko00000,ko02000 ) H( ) antiporter that extrudes sodium in exchange for external protons
PDDFDHOE_02270 9.89e-83 - - - K - - - Transcriptional regulator, BlaI MecI CopY family
PDDFDHOE_02271 0.0 - - - KT - - - Peptidase, M56 family
PDDFDHOE_02272 9.56e-256 rmuC - - S ko:K09760 - ko00000 RmuC family
PDDFDHOE_02273 1.92e-209 map 3.4.11.18 - E ko:K01265 - ko00000,ko01000,ko01002 Psort location Cytoplasmic, score
PDDFDHOE_02274 7.23e-148 - - - S - - - Domain of unknown function (DUF4858)
PDDFDHOE_02275 5.95e-101 - - - L - - - regulation of translation
PDDFDHOE_02276 5.04e-47 - - - S - - - Domain of unknown function (DUF4248)
PDDFDHOE_02277 0.0 - - - L - - - COG NOG25561 non supervised orthologous group
PDDFDHOE_02278 1.99e-145 - - - L - - - VirE N-terminal domain protein
PDDFDHOE_02280 0.0 - 3.1.6.1 - P ko:K01130 ko00140,ko00600,map00140,map00600 ko00000,ko00001,ko01000 Arylsulfatase
PDDFDHOE_02281 0.0 - - - T - - - COG COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
PDDFDHOE_02282 0.0 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_02283 4.47e-173 hddC - - JM - - - COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits (eIF-2Bgamma eIF-2Bepsilon)
PDDFDHOE_02284 6.12e-169 - - - S - - - PD-(D/E)XK nuclease family transposase
PDDFDHOE_02285 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PDDFDHOE_02286 2.94e-308 - - - S ko:K21572 - ko00000,ko02000 SusD family
PDDFDHOE_02287 7.56e-184 - - - G - - - Domain of unknown function (DUF5014)
PDDFDHOE_02288 0.0 betC_2 - - P - - - COG COG3119 Arylsulfatase A and related enzymes
PDDFDHOE_02289 0.0 - 3.2.1.52 GH20 G ko:K12373 ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142 ko00000,ko00001,ko00002,ko01000,ko03110 Glycosyl hydrolase family 20, catalytic domain
PDDFDHOE_02290 0.0 lacZ 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 COG3250 Beta-galactosidase beta-glucuronidase
PDDFDHOE_02291 0.0 - 3.2.1.51 GH29 G ko:K01206 ko00511,map00511 ko00000,ko00001,ko01000,ko04147 F5 8 type C domain protein
PDDFDHOE_02292 0.0 - - - P - - - COG COG3119 Arylsulfatase A and related enzymes
PDDFDHOE_02293 2.82e-280 ybdG_1 - - M ko:K16053 - ko00000,ko02000 Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_02294 0.0 - 3.1.6.1 - P ko:K01130 ko00140,ko00600,map00140,map00600 ko00000,ko00001,ko01000 Arylsulfatase
PDDFDHOE_02295 0.0 - - - G - - - Glycosyl hydrolase family 20, catalytic domain
PDDFDHOE_02296 0.0 - - - E ko:K21572 - ko00000,ko02000 Pfam:SusD
PDDFDHOE_02297 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PDDFDHOE_02298 1.51e-233 - - - PT - - - Domain of unknown function (DUF4974)
PDDFDHOE_02299 2.01e-121 - - - K ko:K03088 - ko00000,ko03021 ECF sigma factor
PDDFDHOE_02300 6.02e-250 - - - S - - - Endonuclease Exonuclease phosphatase family
PDDFDHOE_02301 0.0 pepD_1 - - E ko:K01270 ko00480,ko01100,map00480,map01100 ko00000,ko00001,ko01000,ko01002 Psort location Cytoplasmic, score 8.96
PDDFDHOE_02302 5.49e-42 - - - S - - - COG NOG35566 non supervised orthologous group
PDDFDHOE_02303 2.76e-126 - - - M ko:K06142 - ko00000 membrane
PDDFDHOE_02304 9.6e-73 - - - S - - - Psort location CytoplasmicMembrane, score
PDDFDHOE_02305 3.57e-62 - - - D - - - Septum formation initiator
PDDFDHOE_02306 0.0 dnaX 2.7.7.7 - H ko:K02343 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PDDFDHOE_02307 5.09e-49 - - - KT - - - PspC domain protein
PDDFDHOE_02309 1.37e-269 - - - M ko:K07282 - ko00000 Bacterial capsule synthesis protein
PDDFDHOE_02310 1.11e-207 folD 1.5.1.5, 3.5.4.9 - F ko:K01491 ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
PDDFDHOE_02311 0.0 ccp 1.11.1.5 - C ko:K00428 - ko00000,ko01000 Psort location Periplasmic, score
PDDFDHOE_02312 1.51e-189 ycf - - O - - - COG COG0755 ABC-type transport system involved in cytochrome c biogenesis, permease component
PDDFDHOE_02313 1.15e-204 - - - O - - - Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_02314 0.0 - - - G - - - Domain of unknown function (DUF4838)
PDDFDHOE_02315 1.09e-308 ampG - - EGP ko:K08218 ko01501,map01501 ko00000,ko00001,ko00002,ko02000 Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_02316 2.03e-254 - 2.4.1.319, 2.4.1.320 - G ko:K18785 - ko00000,ko01000 glycosylase
PDDFDHOE_02317 0.0 - - - G - - - Alpha-1,2-mannosidase
PDDFDHOE_02318 2.01e-214 - - - G - - - Xylose isomerase-like TIM barrel
PDDFDHOE_02319 4.63e-91 - - - S - - - Domain of unknown function
PDDFDHOE_02320 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PDDFDHOE_02321 0.0 - - - F ko:K21572 - ko00000,ko02000 SusD family
PDDFDHOE_02322 0.0 - - - G - - - pectate lyase K01728
PDDFDHOE_02323 4.64e-151 - - - S - - - Protein of unknown function (DUF3826)
PDDFDHOE_02324 1.27e-216 - - - G - - - Belongs to the glycosyl hydrolase 43 family
PDDFDHOE_02325 0.0 hypBA2 - - G - - - BNR repeat-like domain
PDDFDHOE_02326 0.0 - 3.2.1.40 - G ko:K05989 - ko00000,ko01000 Alpha-L-rhamnosidase N-terminal domain protein
PDDFDHOE_02327 0.0 - - - G - - - Belongs to the glycosyl hydrolase 28 family
PDDFDHOE_02328 0.0 - - - Q - - - cephalosporin-C deacetylase activity
PDDFDHOE_02329 2.49e-183 - - - M ko:K07001 - ko00000 Patatin-like phospholipase
PDDFDHOE_02330 7.21e-205 - - - IQ - - - Oxidoreductase, short chain dehydrogenase reductase family protein
PDDFDHOE_02331 0.0 - 3.2.1.40 - G ko:K05989 - ko00000,ko01000 Alpha-L-rhamnosidase N-terminal domain protein
PDDFDHOE_02332 0.0 - - - G - - - Putative collagen-binding domain of a collagenase
PDDFDHOE_02333 9.41e-306 - 3.2.1.172 GH105 E ko:K15532 - ko00000,ko01000 unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins
PDDFDHOE_02334 0.0 - 3.2.1.51 GH95 G ko:K15923 ko00511,map00511 ko00000,ko00001,ko01000 COG NOG04001 non supervised orthologous group
PDDFDHOE_02335 2.46e-228 - 1.3.5.2 - F ko:K00254 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor
PDDFDHOE_02336 2.41e-191 - - - I - - - alpha/beta hydrolase fold
PDDFDHOE_02337 1.69e-125 - - - S - - - Putative auto-transporter adhesin, head GIN domain
PDDFDHOE_02338 3.41e-172 yfkO - - C - - - Nitroreductase family
PDDFDHOE_02339 5.75e-201 - - - S - - - COG4422 Bacteriophage protein gp37
PDDFDHOE_02340 0.0 - - - S ko:K09955 - ko00000 protein conserved in bacteria
PDDFDHOE_02341 0.0 - - - S - - - Parallel beta-helix repeats
PDDFDHOE_02342 0.0 - - - G - - - Alpha-L-rhamnosidase
PDDFDHOE_02343 0.0 - - - V ko:K02004 - ko00000,ko00002,ko02000 Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_02344 4.79e-221 - - - G - - - COG COG4632 Exopolysaccharide biosynthesis protein related to N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase
PDDFDHOE_02345 3.24e-102 - - - S ko:K07107 - ko00000,ko01000 acyl-CoA thioester hydrolase, YbgC YbaW family
PDDFDHOE_02346 1.29e-121 rimN 2.7.7.87 - J ko:K07566 - ko00000,ko01000,ko03009,ko03016 Belongs to the SUA5 family
PDDFDHOE_02347 0.0 clcB - - P ko:K03281 - ko00000 Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_02348 1.26e-225 fmt 2.1.2.9 - J ko:K00604 ko00670,ko00970,map00670,map00970 ko00000,ko00001,ko01000 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
PDDFDHOE_02349 1.24e-152 rpe 5.1.3.1 - G ko:K01783 ko00030,ko00040,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score 8.96
PDDFDHOE_02350 0.0 comEC - - S ko:K02238 - ko00000,ko00002,ko02044 Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_02351 1.05e-254 nrnA 3.1.13.3, 3.1.3.7 - S ko:K06881 ko00920,ko01100,ko01120,map00920,map01100,map01120 ko00000,ko00001,ko01000,ko03400 DHH family
PDDFDHOE_02352 1.84e-153 - - - S - - - COG NOG30041 non supervised orthologous group
PDDFDHOE_02353 0.0 glmM 5.4.2.8 - G ko:K01840 ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score 8.96
PDDFDHOE_02354 0.0 - - - KT - - - Y_Y_Y domain
PDDFDHOE_02355 0.0 - - - P - - - TonB dependent receptor
PDDFDHOE_02356 0.0 - - - P ko:K21572 - ko00000,ko02000 SusD family
PDDFDHOE_02357 0.0 - - - S - - - Peptidase of plants and bacteria
PDDFDHOE_02358 0.0 - - - - - - - -
PDDFDHOE_02359 0.0 - 3.2.1.51 GH29 G ko:K01206 ko00511,map00511 ko00000,ko00001,ko01000,ko04147 Alpha-L-fucosidase
PDDFDHOE_02360 0.0 - - - KT - - - Transcriptional regulator, AraC family
PDDFDHOE_02361 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PDDFDHOE_02362 0.0 - - - P ko:K21572 - ko00000,ko02000 SusD family
PDDFDHOE_02363 0.0 - - - M - - - Calpain family cysteine protease
PDDFDHOE_02364 4.4e-310 - - - - - - - -
PDDFDHOE_02365 0.0 - - - G - - - Glycosyl hydrolase family 92
PDDFDHOE_02366 0.0 - - - G - - - Glycosyl hydrolase family 92
PDDFDHOE_02367 5.29e-196 - - - S - - - Peptidase of plants and bacteria
PDDFDHOE_02368 0.0 - - - G - - - Glycosyl hydrolase family 92
PDDFDHOE_02369 4.65e-185 - - - K ko:K02477 - ko00000,ko02022 LytTr DNA-binding domain protein
PDDFDHOE_02370 2.97e-244 - - - T - - - Histidine kinase
PDDFDHOE_02371 1.46e-211 - - - M ko:K15727 - ko00000,ko02000 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PDDFDHOE_02372 0.0 czcA - - P ko:K15726 - ko00000,ko02000 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PDDFDHOE_02373 8.99e-310 - - - NU - - - Lipid A 3-O-deacylase (PagL)
PDDFDHOE_02374 2.83e-237 - - - - - - - -
PDDFDHOE_02375 0.0 - - - H - - - COG NOG08812 non supervised orthologous group
PDDFDHOE_02376 1.06e-175 recO - - L ko:K03584 ko03440,map03440 ko00000,ko00001,ko03400 Involved in DNA repair and RecF pathway recombination
PDDFDHOE_02377 5.17e-218 - - - L - - - Phage integrase, N-terminal SAM-like domain
PDDFDHOE_02378 2.88e-141 - - - M - - - Protein of unknown function (DUF3575)
PDDFDHOE_02379 2.64e-226 - - - U - - - Domain of unknown function, B. Theta Gene description (DUF3868)
PDDFDHOE_02380 8.61e-132 - - - M - - - Protein of unknown function (DUF3575)
PDDFDHOE_02382 8.43e-302 - - - M - - - COG NOG23378 non supervised orthologous group
PDDFDHOE_02383 0.0 - - - S - - - Major fimbrial subunit protein type IV, Fimbrillin, C-terminal
PDDFDHOE_02384 8.51e-219 - - - S - - - Fimbrillin-A associated anchor proteins Mfa1 and Mfa2
PDDFDHOE_02387 2.48e-48 rpsT - - J ko:K02968 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds directly to 16S ribosomal RNA
PDDFDHOE_02388 0.0 gyrB 5.99.1.3 - L ko:K02470 - ko00000,ko01000,ko03032,ko03400 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PDDFDHOE_02389 1.17e-141 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_02390 0.0 gpmI 5.4.2.12 - G ko:K15633 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PDDFDHOE_02391 0.0 - - - CO - - - COG NOG39333 non supervised orthologous group
PDDFDHOE_02392 3.64e-221 corA - - P ko:K03284 - ko00000,ko02000 Psort location Cytoplasmic, score 8.96
PDDFDHOE_02393 0.0 - - - P - - - Psort location OuterMembrane, score
PDDFDHOE_02395 6.24e-145 rnhB 3.1.26.4 - L ko:K03470 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PDDFDHOE_02396 0.0 hppA 3.6.1.1 - C ko:K15987 ko00190,map00190 ko00000,ko00001,ko01000 Sodium pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for Na( ) movement across the membrane
PDDFDHOE_02397 1.66e-15 - 3.2.1.22 - G ko:K07407 ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603 ko00000,ko00001,ko01000 alpha-galactosidase
PDDFDHOE_02398 2.24e-66 - - - S - - - Belongs to the UPF0145 family
PDDFDHOE_02399 1.68e-294 sufS 2.8.1.7, 4.4.1.16 - E ko:K11717 ko00450,ko01100,map00450,map01100 ko00000,ko00001,ko01000 Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family
PDDFDHOE_02400 0.0 sufD - - O ko:K09015 - ko00000 COG0719 ABC-type transport system involved in Fe-S cluster assembly permease component
PDDFDHOE_02401 2.3e-174 sufC - - O ko:K09013 - ko00000,ko02000 COG0396 ABC-type transport system involved in Fe-S cluster assembly ATPase component
PDDFDHOE_02402 0.0 sufB - - O ko:K09014 - ko00000 COG0719 ABC-type transport system involved in Fe-S cluster assembly permease component
PDDFDHOE_02403 2.98e-55 cvpA - - S ko:K03558 - ko00000 Psort location CytoplasmicMembrane, score
PDDFDHOE_02404 0.0 infB - - J ko:K02519 - ko00000,ko03012,ko03029 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
PDDFDHOE_02405 5.04e-296 nusA - - K ko:K02600 - ko00000,ko03009,ko03021 Participates in both transcription termination and antitermination
PDDFDHOE_02406 2.5e-104 rimP - - J ko:K09748 - ko00000,ko03009 Required for maturation of 30S ribosomal subunits
PDDFDHOE_02407 2.96e-207 - - - S ko:K07126 - ko00000 beta-lactamase activity
PDDFDHOE_02408 1.13e-84 - - - S - - - COG NOG29451 non supervised orthologous group
PDDFDHOE_02409 1.9e-164 - - - S ko:K07043 - ko00000 Psort location Cytoplasmic, score 8.96
PDDFDHOE_02410 1.69e-131 - - - S - - - Putative auto-transporter adhesin, head GIN domain
PDDFDHOE_02411 6.08e-102 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_02412 5.95e-112 - - - K ko:K03088 - ko00000,ko03021 Belongs to the sigma-70 factor family. ECF subfamily
PDDFDHOE_02413 7.1e-177 argB 2.7.2.8 - F ko:K00930 ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the acetylglutamate kinase family. ArgB subfamily
PDDFDHOE_02414 0.0 speA 4.1.1.19 - H ko:K01585 ko00330,ko01100,map00330,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the biosynthesis of agmatine from arginine
PDDFDHOE_02415 2.82e-122 aroK 2.7.1.71 - F ko:K00891 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
PDDFDHOE_02416 1.31e-146 - - - S ko:K07078 - ko00000 oxidoreductase related to nitroreductase
PDDFDHOE_02417 1.68e-164 rnhA 3.1.26.4 - C ko:K03469 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 double-stranded RNA RNA-DNA hybrid binding protein
PDDFDHOE_02418 4.28e-97 - - - S - - - Psort location CytoplasmicMembrane, score 9.46
PDDFDHOE_02419 1.08e-270 - - - S - - - Pfam:DUF2029
PDDFDHOE_02420 0.0 - - - S - - - Pfam:DUF2029
PDDFDHOE_02421 7.18e-170 cobB - - K ko:K12410 - ko00000,ko01000 NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
PDDFDHOE_02422 1.98e-44 - - - - - - - -
PDDFDHOE_02423 5.48e-78 - - - K ko:K07506,ko:K13652 - ko00000,ko03000 Bacterial regulatory helix-turn-helix proteins, AraC family
PDDFDHOE_02424 4.36e-196 - - - Q - - - COG NOG10855 non supervised orthologous group
PDDFDHOE_02425 0.0 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
PDDFDHOE_02426 0.0 - 3.2.1.51 GH29 G ko:K01206 ko00511,map00511 ko00000,ko00001,ko01000,ko04147 COG COG3669 Alpha-L-fucosidase
PDDFDHOE_02427 0.0 - 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 2 family
PDDFDHOE_02428 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PDDFDHOE_02429 0.0 - - - P ko:K21572 - ko00000,ko02000 non supervised orthologous group
PDDFDHOE_02430 2.74e-306 - - - S - - - Domain of unknown function (DUF5126)
PDDFDHOE_02431 1.15e-23 - - - S - - - Domain of unknown function
PDDFDHOE_02432 0.0 - 4.2.2.5 PL8 N ko:K19049 - ko00000,ko01000 Polysaccharide lyase family 8, super-sandwich domain
PDDFDHOE_02433 0.0 - - - G - - - unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins
PDDFDHOE_02434 7.05e-216 - - - E - - - COG NOG17363 non supervised orthologous group
PDDFDHOE_02435 0.0 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
PDDFDHOE_02436 2.9e-92 - - - S - - - amine dehydrogenase activity
PDDFDHOE_02437 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PDDFDHOE_02438 1.55e-233 - - - P ko:K21572 - ko00000,ko02000 Psort location OuterMembrane, score
PDDFDHOE_02439 4.32e-62 - - - S - - - Domain of unknown function (DUF4361)
PDDFDHOE_02440 1.09e-262 - 3.2.1.37, 3.2.1.55 GH43,GH51 G ko:K01198,ko:K01209 ko00520,ko01100,map00520,map01100 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 43 family
PDDFDHOE_02442 0.0 - - - M - - - Belongs to the glycosyl hydrolase 43 family
PDDFDHOE_02443 0.0 - - - G - - - Glycosyl hydrolase family 115
PDDFDHOE_02444 6.15e-184 - - - S - - - Glycosyltransferase, group 2 family protein
PDDFDHOE_02445 0.0 - - - M - - - Glycosyltransferase, group 1 family protein
PDDFDHOE_02446 1.38e-296 - 1.1.1.336 - M ko:K02472 ko00520,ko05111,map00520,map05111 ko00000,ko00001,ko01000 Belongs to the UDP-glucose GDP-mannose dehydrogenase family
PDDFDHOE_02447 1.49e-272 epsC 5.1.3.14 - G ko:K01791 ko00520,ko01100,ko05111,map00520,map01100,map05111 ko00000,ko00001,ko00002,ko01000,ko01005 UDP-N-acetylglucosamine 2-epimerase
PDDFDHOE_02449 0.0 - - - S - - - Sugar-transfer associated ATP-grasp
PDDFDHOE_02450 8.41e-314 oprM_1 - - MU - - - Efflux transporter, outer membrane factor lipoprotein, NodT family
PDDFDHOE_02451 0.0 bepE_1 - - V ko:K03296 - ko00000 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PDDFDHOE_02452 2.28e-251 - - - M ko:K03585 ko01501,ko01503,map01501,map01503 ko00000,ko00001,ko00002,ko01504,ko02000,ko03036 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PDDFDHOE_02453 4.12e-224 - - - K - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_02454 2.31e-299 - - - M - - - Glycosyl transferases group 1
PDDFDHOE_02455 8.91e-270 - - - M - - - Glycosyl transferases group 1
PDDFDHOE_02456 1.47e-286 - - - M - - - Glycosyl transferase 4-like domain
PDDFDHOE_02457 2.6e-257 - - - - - - - -
PDDFDHOE_02458 0.0 - - - S - - - Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_02459 1.09e-90 - - - S - - - ORF6N domain
PDDFDHOE_02460 0.0 metG 6.1.1.10 - J ko:K01874 ko00450,ko00970,map00450,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
PDDFDHOE_02461 1.9e-173 - - - K - - - Peptidase S24-like
PDDFDHOE_02462 4.42e-20 - - - - - - - -
PDDFDHOE_02463 7.86e-212 - - - L - - - Domain of unknown function (DUF4373)
PDDFDHOE_02464 1.11e-113 - - - L - - - COG NOG31286 non supervised orthologous group
PDDFDHOE_02465 7.45e-10 - - - - - - - -
PDDFDHOE_02466 0.0 - - - M - - - COG3209 Rhs family protein
PDDFDHOE_02467 0.0 - - - M - - - COG COG3209 Rhs family protein
PDDFDHOE_02468 9.67e-48 - - - IQ - - - Protein of unknown function (DUF1493)
PDDFDHOE_02469 0.0 - - - C ko:K09181 - ko00000 CoA binding domain protein
PDDFDHOE_02470 0.0 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
PDDFDHOE_02471 1.43e-303 - - - S - - - Tat pathway signal sequence domain protein
PDDFDHOE_02472 1.58e-41 - - - - - - - -
PDDFDHOE_02473 0.0 - - - S - - - Tat pathway signal sequence domain protein
PDDFDHOE_02474 0.0 - - - G - - - COG NOG29805 non supervised orthologous group
PDDFDHOE_02475 5.97e-150 apbE_1 2.7.1.180 - H ko:K03734 - ko00000,ko01000 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
PDDFDHOE_02476 0.0 - - - S - - - COG NOG06097 non supervised orthologous group
PDDFDHOE_02477 0.0 - 3.2.1.50 - G ko:K01205 ko00531,ko01100,ko04142,map00531,map01100,map04142 ko00000,ko00001,ko00002,ko01000,ko04147 Alpha-N-acetylglucosaminidase
PDDFDHOE_02478 0.0 - - - G - - - exo-alpha-(2->6)-sialidase activity
PDDFDHOE_02479 9.78e-281 - - - S - - - unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins
PDDFDHOE_02480 1.85e-93 - - - L - - - DNA-binding protein
PDDFDHOE_02481 3.69e-138 - - - L - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_02483 0.0 - - - G - - - Glycosyl hydrolase family 63 C-terminal domain
PDDFDHOE_02484 0.0 - 3.2.1.99 GH43 G ko:K06113 - ko00000,ko01000 Domain of unknown function (DUF1735)
PDDFDHOE_02485 0.0 - - - S - - - IPT TIG domain protein
PDDFDHOE_02486 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PDDFDHOE_02487 0.0 - - - P ko:K21572 - ko00000,ko02000 Psort location OuterMembrane, score
PDDFDHOE_02488 1.38e-220 - - - S - - - Domain of unknown function (DUF4361)
PDDFDHOE_02489 2.42e-311 - - - G - - - Belongs to the glycosyl hydrolase 43 family
PDDFDHOE_02490 0.0 - - - G - - - Glycosyl hydrolase family 76
PDDFDHOE_02491 0.0 - - - S - - - unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins
PDDFDHOE_02492 0.0 csxA_4 - - G - - - Belongs to the glycosyl hydrolase 2 family
PDDFDHOE_02493 0.0 - - - C - - - FAD dependent oxidoreductase
PDDFDHOE_02494 1.02e-282 - 3.2.1.197 - G ko:K21065 - ko00000,ko01000 beta-1,4-mannooligosaccharide phosphorylase
PDDFDHOE_02495 2.05e-260 - - - S - - - unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins
PDDFDHOE_02496 0.0 - - - O - - - COG NOG25094 non supervised orthologous group
PDDFDHOE_02497 0.0 - - - G - - - Belongs to the glycosyl hydrolase 2 family
PDDFDHOE_02498 6.52e-216 - - - K - - - Transcriptional regulator, AraC family
PDDFDHOE_02499 0.0 - 5.3.1.4 - G ko:K01804 ko00040,ko01100,map00040,map01100 ko00000,ko00001,ko01000 Catalyzes the conversion of L-arabinose to L-ribulose
PDDFDHOE_02500 0.0 - 3.2.1.45 GH116 G ko:K17108 ko00511,ko00600,ko01100,map00511,map00600,map01100 ko00000,ko00001,ko01000 Pfam:GBA2_N
PDDFDHOE_02501 0.0 - 2.8.2.1 - M ko:K01014 ko05204,map05204 ko00000,ko00001,ko01000 transferase activity, transferring glycosyl groups
PDDFDHOE_02502 0.0 - - - M - - - Glycosyltransferase WbsX
PDDFDHOE_02503 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PDDFDHOE_02504 0.0 - - - P ko:K21572 - ko00000,ko02000 non supervised orthologous group
PDDFDHOE_02505 3.84e-305 - - - S - - - Domain of unknown function (DUF5126)
PDDFDHOE_02506 8.72e-301 - - - S - - - Domain of unknown function
PDDFDHOE_02507 1.03e-268 - - - G - - - Belongs to the glycosyl hydrolase 43 family
PDDFDHOE_02508 3.43e-34 arbA_2 3.2.1.99 GH43 G ko:K06113 - ko00000,ko01000 hydrolase, family 43
PDDFDHOE_02511 0.0 - - - Q - - - 4-hydroxyphenylacetate
PDDFDHOE_02512 3.4e-209 - - - G - - - Belongs to the glycosyl hydrolase 43 family
PDDFDHOE_02513 3.54e-47 - - - S - - - Domain of unknown function (DUF4248)
PDDFDHOE_02514 0.0 - - - L - - - COG NOG25561 non supervised orthologous group
PDDFDHOE_02515 8.8e-149 - - - L - - - VirE N-terminal domain protein
PDDFDHOE_02517 6.75e-47 - 4.1.1.3 - C ko:K01573 ko00620,ko01100,map00620,map01100 ko00000,ko00001,ko01000,ko02000 Sodium pump decarboxylase gamma subunit
PDDFDHOE_02518 0.0 cfiA 6.4.1.1 - C ko:K01960 ko00020,ko00620,ko00720,ko01100,ko01120,ko01200,ko01230,map00020,map00620,map00720,map01100,map01120,map01200,map01230 ko00000,ko00001,ko00002,ko01000 COG5016 Pyruvate oxaloacetate carboxyltransferase
PDDFDHOE_02519 6.95e-282 - 4.1.1.3 - C ko:K01572 ko00620,ko01100,map00620,map01100 ko00000,ko00001,ko01000,ko02000 sodium ion-translocating decarboxylase, beta subunit
PDDFDHOE_02520 1.4e-300 - - - MU - - - Psort location OuterMembrane, score
PDDFDHOE_02521 0.0 - - - V - - - Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PDDFDHOE_02522 1.41e-241 - - - M - - - Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PDDFDHOE_02523 4.78e-55 rpmE2 - - J ko:K02909 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal protein L31
PDDFDHOE_02524 6.71e-241 fba 4.1.2.13 - G ko:K01624 ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score
PDDFDHOE_02525 3.16e-313 - - - S - - - Tetratricopeptide repeat protein
PDDFDHOE_02526 1.27e-269 oadB 4.1.1.3 - C ko:K01572 ko00620,ko01100,map00620,map01100 ko00000,ko00001,ko01000,ko02000 sodium ion-translocating decarboxylase, beta subunit
PDDFDHOE_02527 1.3e-78 mmdC - - I - - - first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
PDDFDHOE_02528 1.26e-215 - - - C - - - Lamin Tail Domain
PDDFDHOE_02529 0.0 mmdA - - I - - - COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta)
PDDFDHOE_02530 2.75e-91 mce 5.1.99.1 - E ko:K05606 ko00280,ko00630,ko00640,ko00720,ko01100,ko01120,ko01200,map00280,map00630,map00640,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score 8.96
PDDFDHOE_02531 6.24e-245 - - - V - - - COG NOG22551 non supervised orthologous group
PDDFDHOE_02532 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PDDFDHOE_02533 0.0 - - - E ko:K21572 - ko00000,ko02000 SusD family
PDDFDHOE_02534 3.25e-127 cah 4.2.1.1 - P ko:K01673 ko00910,map00910 ko00000,ko00001,ko01000 Reversible hydration of carbon dioxide
PDDFDHOE_02535 1.7e-29 - - - - - - - -
PDDFDHOE_02536 1.44e-121 - - - C - - - Nitroreductase family
PDDFDHOE_02537 3.12e-68 - - - S - - - Psort location CytoplasmicMembrane, score
PDDFDHOE_02538 7.14e-185 - - - S - - - NADP oxidoreductase coenzyme F420-dependent
PDDFDHOE_02539 1.46e-123 kdsC 3.1.3.45 - S ko:K03270 ko00540,ko01100,map00540,map01100 ko00000,ko00001,ko00002,ko01000,ko01005 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family
PDDFDHOE_02540 5.15e-136 maf - - D ko:K06287 - ko00000 COG0424 Nucleotide-binding protein implicated in inhibition of septum formation
PDDFDHOE_02541 0.0 - - - S - - - Tetratricopeptide repeat protein
PDDFDHOE_02542 1.96e-251 - - - P - - - phosphate-selective porin O and P
PDDFDHOE_02543 1.84e-198 - - - P ko:K02051 - ko00000,ko00002,ko02000 NMT1/THI5 like
PDDFDHOE_02544 3.7e-297 pgk 2.7.2.3 - F ko:K00927 ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko04147 Psort location Cytoplasmic, score
PDDFDHOE_02545 7.78e-165 nth 4.2.99.18 - L ko:K10773 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
PDDFDHOE_02546 2.5e-297 - - - EGP - - - Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_02547 2.76e-247 pheS 6.1.1.20 - J ko:K01889 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
PDDFDHOE_02548 1.67e-249 - - - M - - - Gram-negative bacterial TonB protein C-terminal
PDDFDHOE_02549 5.79e-43 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_02550 2.91e-181 - - - S - - - hydrolases of the HAD superfamily
PDDFDHOE_02552 4.15e-70 - - - S - - - COG NOG30624 non supervised orthologous group
PDDFDHOE_02553 2.19e-130 ruvC 3.1.22.4 - L ko:K01159 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
PDDFDHOE_02554 0.0 pulA 3.2.1.41 CBM48,GH13 G ko:K01200 ko00500,ko01100,ko01110,map00500,map01100,map01110 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 13 family
PDDFDHOE_02555 0.0 modF - - P ko:K05776 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC molybdenum transporter, ATP-binding subunit modF
PDDFDHOE_02556 0.0 - - - T - - - Psort location CytoplasmicMembrane, score 7.88
PDDFDHOE_02557 8.42e-185 gpmA 5.4.2.11 - G ko:K01834 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PDDFDHOE_02558 1.62e-256 fbaB 4.1.2.13 - G ko:K11645 ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 COG COG1830 DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes
PDDFDHOE_02559 7.48e-155 tal 2.2.1.2 - F ko:K00616,ko:K08314 ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
PDDFDHOE_02560 9.04e-230 - - - L - - - COG NOG21178 non supervised orthologous group
PDDFDHOE_02561 0.0 - - - S - - - Domain of unknown function (DUF1735)
PDDFDHOE_02562 0.0 - - - H - - - TonB-linked outer membrane protein, SusC RagA family
PDDFDHOE_02563 0.0 - - - P ko:K21572 - ko00000,ko02000 SusD family
PDDFDHOE_02565 2.12e-81 rsfS - - J ko:K09710 - ko00000,ko03009 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
PDDFDHOE_02566 0.0 ftsH - - O ko:K03798 - ko00000,ko00002,ko01000,ko01002,ko03110 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
PDDFDHOE_02567 4.49e-196 cdsA 2.7.7.41 - M ko:K00981 ko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070 ko00000,ko00001,ko00002,ko01000 Belongs to the CDS family
PDDFDHOE_02568 3.43e-189 - - - S - - - COG NOG29298 non supervised orthologous group
PDDFDHOE_02569 6.96e-263 lpxB 2.4.1.182 GT19 M ko:K00748 ko00540,ko01100,map00540,map01100 ko00000,ko00001,ko00002,ko01000,ko01003,ko01005 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
PDDFDHOE_02570 4.89e-194 surE 3.1.3.5 - S ko:K03787 ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110 ko00000,ko00001,ko01000 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
PDDFDHOE_02571 9.59e-172 soj - - D ko:K03496 - ko00000,ko03036,ko04812 CobQ CobB MinD ParA nucleotide binding domain
PDDFDHOE_02572 5.04e-201 parB - - K ko:K03497 - ko00000,ko03000,ko03036,ko04812 Belongs to the ParB family
PDDFDHOE_02573 2.16e-206 - - - S - - - Psort location CytoplasmicMembrane, score
PDDFDHOE_02574 9.64e-317 mltD - - M ko:K08307 - ko00000,ko01000,ko01011 Transglycosylase SLT domain
PDDFDHOE_02575 0.0 relA 2.7.6.5 - KT ko:K00951 ko00230,map00230 ko00000,ko00001,ko01000 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
PDDFDHOE_02576 1.66e-73 ycgE - - K - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_02577 1.15e-235 - - - M - - - Peptidase, M23
PDDFDHOE_02578 0.0 alaS 6.1.1.7 - J ko:K01872 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
PDDFDHOE_02579 0.0 - - - G - - - Alpha-1,2-mannosidase
PDDFDHOE_02580 8.62e-126 - - - K ko:K03088 - ko00000,ko03021 RNA polymerase sigma-70 factor
PDDFDHOE_02581 1.26e-220 - - - PT - - - COG3712 Fe2 -dicitrate sensor, membrane component
PDDFDHOE_02582 0.0 - - - G - - - Alpha-1,2-mannosidase
PDDFDHOE_02583 0.0 - - - G - - - Alpha-1,2-mannosidase
PDDFDHOE_02584 1.55e-104 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_02585 5.62e-316 - - - S - - - Domain of unknown function (DUF4989)
PDDFDHOE_02586 0.0 - - - G - - - Psort location Extracellular, score 9.71
PDDFDHOE_02587 1.77e-284 - - - S - - - Domain of unknown function (DUF1735)
PDDFDHOE_02588 3.48e-246 - - - S - - - Putative glycoside hydrolase Family 18, chitinase_18
PDDFDHOE_02589 0.0 - - - S - - - non supervised orthologous group
PDDFDHOE_02590 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PDDFDHOE_02591 0.0 recD2_2 3.1.11.5 - L ko:K01144 - ko00000,ko01000 COG0507 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member
PDDFDHOE_02592 3.84e-162 - - - S - - - COG NOG19144 non supervised orthologous group
PDDFDHOE_02593 2.49e-181 - - - S - - - Protein of unknown function (DUF3822)
PDDFDHOE_02594 2.14e-127 rsmD 2.1.1.171 - L ko:K08316 - ko00000,ko01000,ko03009 RNA methyltransferase, RsmD family
PDDFDHOE_02595 0.0 cls - - I ko:K06131 ko00564,ko01100,map00564,map01100 ko00000,ko00001,ko01000 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PDDFDHOE_02596 5.76e-243 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_02597 8.08e-171 - - - C - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_02598 1.79e-96 - - - - - - - -
PDDFDHOE_02599 8.27e-111 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_02600 7.17e-166 - - - S - - - COG NOG34011 non supervised orthologous group
PDDFDHOE_02601 9.36e-124 - - - S - - - Psort location CytoplasmicMembrane, score
PDDFDHOE_02602 4.54e-100 smpB - - J ko:K03664 - ko00000 the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
PDDFDHOE_02603 0.0 metH 2.1.1.13 - E ko:K00548 ko00270,ko00450,ko00670,ko01100,ko01110,ko01230,map00270,map00450,map00670,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score
PDDFDHOE_02604 7.57e-141 - - - C - - - COG0778 Nitroreductase
PDDFDHOE_02605 2.44e-25 - - - - - - - -
PDDFDHOE_02606 0.0 - - - E ko:K03307 - ko00000 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
PDDFDHOE_02607 0.0 mltF - - M ko:K18691 - ko00000,ko01000,ko01011 soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein
PDDFDHOE_02608 3.19e-145 udk 2.7.1.48 - F ko:K00876 ko00240,ko00983,ko01100,map00240,map00983,map01100 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score
PDDFDHOE_02609 2.43e-64 - - - S - - - Stress responsive A B barrel domain protein
PDDFDHOE_02610 0.0 dsbD 1.8.1.8 - CO ko:K04084 - ko00000,ko01000,ko03110 cytochrome c biogenesis protein transmembrane region
PDDFDHOE_02611 6.66e-175 - - - S ko:K06911 - ko00000 Belongs to the pirin family
PDDFDHOE_02612 1.46e-134 - - - K ko:K03088 - ko00000,ko03021 Sigma-70, region 4
PDDFDHOE_02613 7.6e-221 - - - PT - - - Domain of unknown function (DUF4974)
PDDFDHOE_02614 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PDDFDHOE_02615 0.0 - - - GM ko:K21572 - ko00000,ko02000 Pfam:SusD
PDDFDHOE_02616 0.0 - - - S - - - Fibronectin type III domain
PDDFDHOE_02617 3.77e-215 - - - M - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_02618 8.15e-267 - - - S - - - Beta-lactamase superfamily domain
PDDFDHOE_02619 2.66e-218 glpQ1_1 3.1.4.46 - C ko:K01126 ko00564,map00564 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score 8.96
PDDFDHOE_02620 0.0 - - - G ko:K07783 ko02020,map02020 ko00000,ko00001,ko02000 Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_02621 1.71e-144 - - - S - - - Protein of unknown function (DUF2490)
PDDFDHOE_02622 0.0 - - - S - - - Fibrobacter succinogenes major domain (Fib_succ_major)
PDDFDHOE_02623 5.18e-119 - - - Q - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_02624 1.62e-195 hisG 2.4.2.17 - F ko:K00765 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 ATP phosphoribosyltransferase
PDDFDHOE_02625 1.69e-295 hisD 1.1.1.23 - E ko:K00013 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
PDDFDHOE_02626 1.89e-253 hisC 2.6.1.9 - E ko:K00817 ko00340,ko00350,ko00360,ko00400,ko00401,ko00960,ko01100,ko01110,ko01130,ko01230,map00340,map00350,map00360,map00400,map00401,map00960,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
PDDFDHOE_02627 3.03e-280 hisB 3.1.3.15, 4.2.1.19 - E ko:K01089,ko:K01693 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Histidine biosynthesis bifunctional protein HisB
PDDFDHOE_02628 3.85e-117 - - - T - - - Tyrosine phosphatase family
PDDFDHOE_02629 0.0 nadE 6.3.5.1 - H ko:K01950 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
PDDFDHOE_02630 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PDDFDHOE_02631 0.0 - - - S ko:K21572 - ko00000,ko02000 Starch-binding associating with outer membrane
PDDFDHOE_02632 1.04e-215 - - - S - - - Domain of unknown function (DUF4984)
PDDFDHOE_02633 0.0 - - - S - - - Domain of unknown function (DUF5003)
PDDFDHOE_02634 1.68e-13 - - - S - - - Psort location CytoplasmicMembrane, score
PDDFDHOE_02635 2.82e-78 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_02637 2.46e-19 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_02638 1.08e-17 - - - S - - - Protein of unknown function (DUF3408)
PDDFDHOE_02639 6.7e-119 - - - D ko:K03496 - ko00000,ko03036,ko04812 CobQ/CobB/MinD/ParA nucleotide binding domain
PDDFDHOE_02641 6.75e-61 - - - S - - - non supervised orthologous group
PDDFDHOE_02642 1.7e-166 - - - U - - - Relaxase mobilization nuclease domain protein
PDDFDHOE_02643 9.08e-121 zupT - - P ko:K07238 - ko00000,ko02000 Mediates zinc uptake. May also transport other divalent cations
PDDFDHOE_02644 6.47e-116 tcmP - - Q - - - COG3315 O-Methyltransferase involved in polyketide biosynthesis
PDDFDHOE_02645 1.04e-249 - - - V ko:K06147 - ko00000,ko02000 ABC transporter, ATP-binding protein
PDDFDHOE_02646 2e-253 - - - V ko:K06147 - ko00000,ko02000 Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation
PDDFDHOE_02647 2.51e-82 - - - K - - - Bacterial regulatory proteins, tetR family
PDDFDHOE_02649 1.54e-304 - - - P ko:K06147 - ko00000,ko02000 ABC transporter transmembrane region
PDDFDHOE_02650 9.08e-274 - - - V ko:K06147 - ko00000,ko02000 ABC transporter transmembrane region
PDDFDHOE_02651 1.28e-63 acpT 2.7.8.7 - H ko:K00997,ko:K06133 ko00770,map00770 ko00000,ko00001,ko01000 lysine biosynthetic process via aminoadipic acid
PDDFDHOE_02652 2.05e-134 - - - Q - - - Thioesterase domain
PDDFDHOE_02653 4.1e-157 - - - Q - - - Thioesterase domain
PDDFDHOE_02654 9.01e-222 - - - Q - - - D-alanine [D-alanyl carrier protein] ligase activity
PDDFDHOE_02655 0.0 - - - Q - - - Acyl transferase domain in polyketide synthase (PKS) enzymes.
PDDFDHOE_02656 0.0 - - - Q - - - AMP-binding enzyme
PDDFDHOE_02657 3.03e-213 - 1.3.8.1 - I ko:K00248 ko00071,ko00280,ko00650,ko01100,ko01110,ko01120,ko01200,ko01212,map00071,map00280,map00650,map01100,map01110,map01120,map01200,map01212 ko00000,ko00001,ko01000 acyl-CoA dehydrogenase
PDDFDHOE_02658 2.13e-110 - - - Q - - - methyltransferase
PDDFDHOE_02659 2.22e-175 - - - S - - - amine dehydrogenase activity
PDDFDHOE_02660 0.0 - - - P - - - TonB-dependent receptor plug domain protein
PDDFDHOE_02661 1.66e-98 - - - K - - - transcriptional regulator
PDDFDHOE_02662 0.0 - - - V - - - Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PDDFDHOE_02663 1.05e-71 - - - M - - - Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PDDFDHOE_02664 1.75e-142 - - - MU - - - Outer membrane efflux protein
PDDFDHOE_02665 1.24e-149 - - - S - - - RteC protein
PDDFDHOE_02666 7.91e-73 - - - - - - - -
PDDFDHOE_02667 1.18e-17 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_02668 4.37e-45 - - - S - - - Helix-turn-helix domain
PDDFDHOE_02669 4.07e-187 - - - U - - - COG COG3505 Type IV secretory pathway, VirD4 components
PDDFDHOE_02670 9.28e-210 - - - K - - - transcriptional regulator (AraC family)
PDDFDHOE_02671 2.46e-219 - - - K - - - transcriptional regulator (AraC family)
PDDFDHOE_02672 2.19e-248 - - - GM - - - NAD(P)H-binding
PDDFDHOE_02673 9.76e-120 - - - S - - - COG NOG28927 non supervised orthologous group
PDDFDHOE_02674 1.14e-160 - - - K - - - COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PDDFDHOE_02675 0.0 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
PDDFDHOE_02676 0.0 - - - P - - - Psort location OuterMembrane, score
PDDFDHOE_02677 0.0 aspD 4.1.1.12 - E ko:K09758 ko00250,ko00270,ko01100,ko01230,map00250,map00270,map01100,map01230 ko00000,ko00001,ko01000 COG COG0436 Aspartate tyrosine aromatic aminotransferase
PDDFDHOE_02678 0.0 aspT - - S ko:K07085 - ko00000 Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_02679 0.0 fhs 6.3.4.3 - F ko:K01938 ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Formyltetrahydrofolate synthetase
PDDFDHOE_02680 1.49e-311 glyA 2.1.2.1 - E ko:K00600 ko00260,ko00460,ko00630,ko00670,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko01523,map00260,map00460,map00630,map00670,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map01523 ko00000,ko00001,ko00002,ko01000 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
PDDFDHOE_02681 1.19e-178 - - - S - - - COG NOG27381 non supervised orthologous group
PDDFDHOE_02682 4.16e-135 - - - S - - - COG COG1853 Conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
PDDFDHOE_02683 4.02e-109 pyrI - - F ko:K00610 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002 Involved in allosteric regulation of aspartate carbamoyltransferase
PDDFDHOE_02684 4.44e-224 pyrB 2.1.3.2 - F ko:K00609 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the ATCase OTCase family
PDDFDHOE_02685 0.0 mrcA 2.4.1.129, 3.4.16.4 GT51 M ko:K05366 ko00550,ko01100,ko01501,map00550,map01100,map01501 ko00000,ko00001,ko01000,ko01003,ko01011 COG5009 Membrane carboxypeptidase penicillin-binding protein
PDDFDHOE_02686 2.44e-80 folK2 2.7.6.3 - H ko:K00950 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko00002,ko01000 COG NOG22185 non supervised orthologous group
PDDFDHOE_02687 5.46e-182 kdsB 2.7.7.38 - H ko:K00979 ko00540,ko01100,map00540,map01100 ko00000,ko00001,ko00002,ko01000,ko01005 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
PDDFDHOE_02688 3.25e-311 - - - S - - - Peptidase M16 inactive domain
PDDFDHOE_02689 4.21e-38 - 2.7.11.1 - S ko:K12132 - ko00000,ko01000,ko01001 phosphatidylinositol-4-phosphate 5-kinase family protein K00889
PDDFDHOE_02690 6.27e-219 prs 2.7.6.1 - EF ko:K00948 ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 COG0462 Phosphoribosylpyrophosphate synthetase
PDDFDHOE_02691 0.0 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
PDDFDHOE_02692 5.42e-169 - - - T - - - Response regulator receiver domain
PDDFDHOE_02693 0.0 ydaH - - H ko:K12942 - ko00000 Psort location CytoplasmicMembrane, score
PDDFDHOE_02694 2.01e-134 - - - K ko:K03088 - ko00000,ko03021 RNA polymerase sigma-70 factor
PDDFDHOE_02695 2.44e-242 - - - PT - - - Domain of unknown function (DUF4974)
PDDFDHOE_02696 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PDDFDHOE_02697 0.0 - - - E ko:K21572 - ko00000,ko02000 Pfam:SusD
PDDFDHOE_02698 0.0 - - - P - - - Protein of unknown function (DUF229)
PDDFDHOE_02699 0.0 - 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 2 family
PDDFDHOE_02701 1.13e-133 - - - S - - - Acetyltransferase (GNAT) domain
PDDFDHOE_02702 2.05e-74 - - - - - - - -
PDDFDHOE_02704 5.59e-190 - - - L - - - COG NOG21178 non supervised orthologous group
PDDFDHOE_02706 4e-119 - - - K - - - COG NOG19120 non supervised orthologous group
PDDFDHOE_02707 2.72e-64 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_02708 3.31e-190 - - - K - - - helix_turn_helix, arabinose operon control protein
PDDFDHOE_02709 0.0 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
PDDFDHOE_02712 0.0 - 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 beta-galactosidase
PDDFDHOE_02713 0.0 - - - G - - - beta-galactosidase
PDDFDHOE_02714 4.42e-84 - - - S ko:K09964 - ko00000 ACT domain
PDDFDHOE_02715 3.84e-162 - - - K ko:K07665 ko02020,map02020 ko00000,ko00001,ko00002,ko01504,ko02022 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PDDFDHOE_02716 4.6e-307 arlS_1 - - T - - - histidine kinase DNA gyrase B
PDDFDHOE_02717 0.0 mgtA 3.6.3.2 - P ko:K01531 - ko00000,ko01000 Psort location CytoplasmicMembrane, score
PDDFDHOE_02718 0.0 - - - CO - - - Thioredoxin-like
PDDFDHOE_02719 0.0 - - - G - - - Glycosyl hydrolase family 2, sugar binding domain protein
PDDFDHOE_02720 0.0 - 3.1.1.53 - G ko:K05970 - ko00000,ko01000 COG NOG04984 non supervised orthologous group
PDDFDHOE_02721 0.0 - - - G - - - hydrolase, family 65, central catalytic
PDDFDHOE_02722 0.0 - 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 2 family
PDDFDHOE_02723 0.0 - - - T - - - cheY-homologous receiver domain
PDDFDHOE_02724 0.0 - - - G - - - pectate lyase K01728
PDDFDHOE_02725 0.0 - - - M - - - Belongs to the glycosyl hydrolase 28 family
PDDFDHOE_02726 8.6e-121 - - - K - - - Sigma-70, region 4
PDDFDHOE_02727 1.75e-52 - - - - - - - -
PDDFDHOE_02728 1.38e-291 - - - G - - - Major Facilitator Superfamily
PDDFDHOE_02729 1.26e-169 - - - S - - - Psort location CytoplasmicMembrane, score 9.46
PDDFDHOE_02730 4.96e-113 - - - S - - - Threonine/Serine exporter, ThrE
PDDFDHOE_02731 1.19e-172 - - - S - - - Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_02732 4.65e-188 vdlC - - S - - - COG COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PDDFDHOE_02733 3.05e-191 - - - S - - - Domain of unknown function (4846)
PDDFDHOE_02734 1.3e-149 - 3.1.3.10, 3.1.3.104 - S ko:K07025,ko:K20866,ko:K21063 ko00010,ko00740,ko01100,ko01110,ko01120,map00010,map00740,map01100,map01110,map01120 ko00000,ko00001,ko00002,ko01000 HAD hydrolase, family IA, variant 3
PDDFDHOE_02735 1.8e-250 - - - S - - - Tetratricopeptide repeat
PDDFDHOE_02736 0.0 - - - EG - - - Protein of unknown function (DUF2723)
PDDFDHOE_02737 2.36e-42 - - - - - - - -
PDDFDHOE_02738 1.02e-60 - - - K - - - helix_turn_helix, Lux Regulon
PDDFDHOE_02739 1.77e-155 - - - S ko:K09702 - ko00000 Protein of unknown function (DUF1349)
PDDFDHOE_02740 7.66e-251 - - - S - - - COG NOG15865 non supervised orthologous group
PDDFDHOE_02741 3.76e-108 - - - K ko:K03088 - ko00000,ko03021 Belongs to the sigma-70 factor family. ECF subfamily
PDDFDHOE_02742 7.48e-126 - - - - - - - -
PDDFDHOE_02743 9.45e-286 aroA 2.5.1.19 - E ko:K00800 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
PDDFDHOE_02744 2.19e-135 - - - T - - - COG COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
PDDFDHOE_02745 1.69e-170 - - - S - - - Enoyl-(Acyl carrier protein) reductase
PDDFDHOE_02746 3.2e-249 - - - M - - - Peptidase, M28 family
PDDFDHOE_02747 0.0 - 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 beta-galactosidase
PDDFDHOE_02748 0.0 - 3.2.1.51 GH29 G ko:K01206 ko00511,map00511 ko00000,ko00001,ko01000,ko04147 Alpha-L-fucosidase
PDDFDHOE_02749 0.0 - - - K - - - GxGYxY sequence motif in domain of unknown function N-terminal
PDDFDHOE_02750 1.56e-230 - - - M - - - F5/8 type C domain
PDDFDHOE_02751 0.0 - - - F ko:K21572 - ko00000,ko02000 SusD family
PDDFDHOE_02752 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PDDFDHOE_02753 1.27e-225 - - - PT - - - Domain of unknown function (DUF4974)
PDDFDHOE_02754 1.59e-130 - - - K ko:K03088 - ko00000,ko03021 Belongs to the sigma-70 factor family. ECF subfamily
PDDFDHOE_02755 0.0 - - - G - - - Glycosyl hydrolase family 92
PDDFDHOE_02756 0.0 - - - S - - - GxGYxY sequence motif in domain of unknown function N-terminal
PDDFDHOE_02757 0.0 - - - E ko:K21572 - ko00000,ko02000 SusD family
PDDFDHOE_02758 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PDDFDHOE_02759 8.89e-238 - - - S - - - Concanavalin A-like lectin/glucanases superfamily
PDDFDHOE_02760 0.0 - - - T - - - COG NOG26059 non supervised orthologous group
PDDFDHOE_02761 1.01e-85 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_02762 3.51e-183 znuB - - P ko:K02075,ko:K09816 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC 3 transport family
PDDFDHOE_02763 5.95e-92 yjeE - - S ko:K06925 - ko00000,ko03016 Psort location Cytoplasmic, score
PDDFDHOE_02764 5.6e-45 - - - S - - - COG NOG34862 non supervised orthologous group
PDDFDHOE_02765 1.04e-64 - - - S ko:K07075 - ko00000 Nucleotidyltransferase domain
PDDFDHOE_02766 8.02e-312 - - - S - - - conserved protein (some members contain a von Willebrand factor type A (vWA) domain)
PDDFDHOE_02767 7.04e-222 - - - S ko:K03924 - ko00000,ko01000 ATPase family associated with various cellular activities (AAA)
PDDFDHOE_02768 1.25e-302 - - - S - - - COG NOG26634 non supervised orthologous group
PDDFDHOE_02769 1.11e-140 - - - S - - - Domain of unknown function (DUF4129)
PDDFDHOE_02770 1.24e-192 - - - - - - - -
PDDFDHOE_02771 1.86e-228 - - - S - - - Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_02773 0.0 - - - - - - - -
PDDFDHOE_02774 6.24e-219 rbsK 2.7.1.15 - H ko:K00852 ko00030,map00030 ko00000,ko00001,ko01000 Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PDDFDHOE_02775 4.37e-214 rbsK 2.7.1.15 - H ko:K00852 ko00030,map00030 ko00000,ko00001,ko01000 Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PDDFDHOE_02776 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PDDFDHOE_02777 0.0 - - - S ko:K21572 - ko00000,ko02000 SusD family
PDDFDHOE_02778 0.0 - - - G - - - Domain of unknown function (DUF4978)
PDDFDHOE_02779 8.91e-248 - - - F - - - Inosine-uridine preferring nucleoside hydrolase
PDDFDHOE_02780 6.17e-237 - - - G ko:K05340 - ko00000,ko02000 COG NOG04879 non supervised orthologous group
PDDFDHOE_02781 0.0 - - - S - - - phosphatase family
PDDFDHOE_02782 0.0 ahpF - - C ko:K03387 - ko00000,ko01000 alkyl hydroperoxide reductase subunit F
PDDFDHOE_02783 7.09e-136 ahpC 1.11.1.15 - O ko:K03386 ko04214,map04214 ko00000,ko00001,ko01000,ko04147 Psort location Cytoplasmic, score
PDDFDHOE_02784 0.0 - - - E ko:K03307 - ko00000 alkaline phosphatase synthesis sensor protein phoR K07636
PDDFDHOE_02785 3.64e-221 - 4.3.3.7 - H ko:K01714 ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Neu5Ac) to form pyruvate and N-acetylmannosamine (ManNAc) via a Schiff base intermediate
PDDFDHOE_02786 5.49e-124 - 3.6.1.55 - F ko:K03574 - ko00000,ko01000,ko03400 NUDIX domain
PDDFDHOE_02788 0.0 - - - S - - - Tetratricopeptide repeat protein
PDDFDHOE_02789 0.0 - - - H - - - Psort location OuterMembrane, score
PDDFDHOE_02790 0.0 - - - H - - - TonB-linked outer membrane protein, SusC RagA family
PDDFDHOE_02791 0.0 - - - P - - - SusD family
PDDFDHOE_02792 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PDDFDHOE_02793 0.0 - - - F ko:K21572 - ko00000,ko02000 SusD family
PDDFDHOE_02794 0.0 - - - S - - - Putative binding domain, N-terminal
PDDFDHOE_02795 0.0 - - - U - - - Putative binding domain, N-terminal
PDDFDHOE_02796 4.67e-283 - - - G - - - Domain of unknown function (DUF4971)
PDDFDHOE_02797 7.42e-256 - 3.2.1.14 GH18 G ko:K01183 ko00520,ko01100,map00520,map01100 ko00000,ko00001,ko01000 Glyco_18
PDDFDHOE_02798 0.0 - - - T - - - COG COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
PDDFDHOE_02800 1.03e-205 - 3.2.2.23, 4.2.99.18 - L ko:K10563 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 Formamidopyrimidine-DNA glycosylase H2TH domain
PDDFDHOE_02801 4.01e-242 mltD_2 - - M - - - Transglycosylase SLT domain protein
PDDFDHOE_02802 2.71e-189 - - - J ko:K10716 - ko00000,ko02000 Transporter, cation channel family protein
PDDFDHOE_02803 1.17e-79 - - - S - - - Psort location CytoplasmicMembrane, score 9.46
PDDFDHOE_02804 1.52e-132 mgtC - - S ko:K07507 - ko00000,ko02000 Mg2 transporter-C family protein
PDDFDHOE_02805 3.86e-190 - - - L - - - DNA metabolism protein
PDDFDHOE_02806 7.04e-308 - - - S - - - DNA-binding protein with the Helix-hairpin-helix motif
PDDFDHOE_02808 1.79e-246 - - - M - - - COG2885 Outer membrane protein and related peptidoglycan-associated
PDDFDHOE_02809 0.0 - - - N - - - bacterial-type flagellum assembly
PDDFDHOE_02810 2.6e-223 - - - L - - - Phage integrase, N-terminal SAM-like domain
PDDFDHOE_02811 1.62e-28 - - - S - - - COG NOG16623 non supervised orthologous group
PDDFDHOE_02812 4.01e-153 - - - K - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_02813 0.0 agcS - - E ko:K03310 - ko00000 amino acid carrier protein
PDDFDHOE_02814 2.52e-149 - - - S - - - COG NOG25304 non supervised orthologous group
PDDFDHOE_02815 0.0 eam 5.4.3.2 - E ko:K01843 ko00310,map00310 ko00000,ko00001,ko01000 KamA family
PDDFDHOE_02816 4.17e-298 pbuX - - F ko:K16345 - ko00000,ko02000 xanthine permease
PDDFDHOE_02817 8.76e-176 - - - S - - - COG NOG09956 non supervised orthologous group
PDDFDHOE_02818 0.0 - - - S - - - COG NOG26858 non supervised orthologous group
PDDFDHOE_02819 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PDDFDHOE_02820 1.02e-133 mug - - L - - - COG3663 G T U mismatch-specific DNA glycosylase
PDDFDHOE_02821 1.51e-80 - 1.20.4.1 - P ko:K00537 - ko00000,ko01000 Belongs to the ArsC family
PDDFDHOE_02823 0.0 - - - S ko:K07114 - ko00000,ko02000 Von Willebrand factor type A domain protein
PDDFDHOE_02824 2.94e-156 - - - I - - - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
PDDFDHOE_02825 3.48e-219 - 2.7.7.41 - M ko:K00981 ko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070 ko00000,ko00001,ko00002,ko01000 Belongs to the CDS family
PDDFDHOE_02826 1.63e-153 - - - I - - - Acyl-transferase
PDDFDHOE_02827 1.72e-128 - - - K ko:K03088 - ko00000,ko03021 Belongs to the sigma-70 factor family. ECF subfamily
PDDFDHOE_02828 2.7e-296 - - - M - - - Carboxypeptidase regulatory-like domain
PDDFDHOE_02829 6.97e-285 - - - S ko:K07148 - ko00000 Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_02830 3.34e-212 pdxK 2.7.1.35 - H ko:K00868 ko00750,ko01100,map00750,map01100 ko00000,ko00001,ko01000 Pyridoxal kinase
PDDFDHOE_02831 9.58e-132 lutC - - S ko:K00782 - ko00000 Psort location Cytoplasmic, score 8.96
PDDFDHOE_02832 0.0 - - - C ko:K18929 - ko00000 electron transport protein YkgF
PDDFDHOE_02833 4.87e-183 - - - C ko:K18928 - ko00000 Psort location Cytoplasmic, score 8.96
PDDFDHOE_02834 7.43e-135 queE 4.3.99.3 - H ko:K10026 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko01000,ko03016 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds
PDDFDHOE_02835 3.33e-85 queD 4.1.2.50, 4.2.3.12 - H ko:K01737 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko00002,ko01000,ko03016 Psort location Cytoplasmic, score
PDDFDHOE_02836 4.82e-78 - - - S ko:K09790 - ko00000 Psort location CytoplasmicMembrane, score
PDDFDHOE_02837 2.47e-136 mtnN 3.2.2.9 - F ko:K01243 ko00270,ko01100,ko01230,map00270,map01100,map01230 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score 8.96
PDDFDHOE_02838 8.51e-308 - - - S - - - Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_02839 2.64e-269 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_02840 0.0 - - - V - - - MacB-like periplasmic core domain
PDDFDHOE_02841 2.91e-155 - - - V ko:K02003 - ko00000,ko00002,ko02000 bacteriocin export ABC transporter, lactococcin 972 group
PDDFDHOE_02842 1.52e-283 - - - M ko:K02005 - ko00000 Efflux transporter, RND family, MFP subunit
PDDFDHOE_02843 0.0 - - - MU - - - Psort location OuterMembrane, score
PDDFDHOE_02844 0.0 - - - T - - - Sigma-54 interaction domain protein
PDDFDHOE_02845 1.62e-294 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
PDDFDHOE_02846 4.7e-35 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_02848 3.83e-173 smtA 2.1.1.223 - J ko:K15460 - ko00000,ko01000,ko03016 Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
PDDFDHOE_02849 0.0 lon 3.4.21.53 - O ko:K01338 ko04112,map04112 ko00000,ko00001,ko01000,ko01002 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
PDDFDHOE_02850 1.51e-281 tgt 2.4.2.29 - F ko:K00773 - ko00000,ko01000,ko03016 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
PDDFDHOE_02851 8.88e-248 lptG - - S ko:K11720 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Permease, YjgP YjgQ family
PDDFDHOE_02852 3.46e-115 - - - O - - - COG NOG28456 non supervised orthologous group
PDDFDHOE_02853 1.94e-287 serB 3.1.3.3 - ET ko:K01079 ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko01009 Psort location Cytoplasmic, score 8.96
PDDFDHOE_02854 1.47e-284 deaD - - L - - - Belongs to the DEAD box helicase family
PDDFDHOE_02855 6.89e-188 - - - S - - - COG NOG26711 non supervised orthologous group
PDDFDHOE_02856 2.23e-314 ugd 1.1.1.22 - C ko:K00012 ko00040,ko00053,ko00520,ko01100,map00040,map00053,map00520,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the UDP-glucose GDP-mannose dehydrogenase family
PDDFDHOE_02857 4.64e-129 rfbC 5.1.3.13 - G ko:K01790 ko00521,ko00523,ko01130,map00521,map00523,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
PDDFDHOE_02858 7.62e-249 - - - D - - - sporulation
PDDFDHOE_02859 2.06e-125 - - - T - - - FHA domain protein
PDDFDHOE_02860 0.0 uxaB 1.1.1.17, 1.1.1.58 - C ko:K00009,ko:K00041 ko00040,ko00051,ko01100,map00040,map00051,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the mannitol dehydrogenase family. UxaB subfamily
PDDFDHOE_02861 1.55e-252 - - - K ko:K02529 - ko00000,ko03000 Psort location Cytoplasmic, score
PDDFDHOE_02862 0.0 uxaC 5.3.1.12 - G ko:K01812 ko00040,ko01100,map00040,map01100 ko00000,ko00001,ko00002,ko01000 glucuronate isomerase
PDDFDHOE_02864 2.72e-195 vicX - - S - - - Metallo-beta-lactamase domain protein
PDDFDHOE_02865 0.0 dtpD - - E - - - Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_02866 1.91e-98 - - - G - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_02867 1.44e-55 - - - - - - - -
PDDFDHOE_02868 0.0 - - - T - - - COG0642 Signal transduction histidine kinase
PDDFDHOE_02869 1.32e-96 nlpE - - MP - - - lipoprotein NlpE involved in copper resistance
PDDFDHOE_02870 4.97e-97 - - - S ko:K15977 - ko00000 Psort location CytoplasmicMembrane, score 9.46
PDDFDHOE_02871 1.61e-125 - - - S - - - COG NOG23374 non supervised orthologous group
PDDFDHOE_02872 0.0 - - - M - - - Outer membrane protein, OMP85 family
PDDFDHOE_02873 2.68e-309 - - - U - - - Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
PDDFDHOE_02874 3.12e-79 - - - K - - - Penicillinase repressor
PDDFDHOE_02875 3.94e-44 - - - S - - - PcfK-like protein
PDDFDHOE_02876 6.32e-315 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_02877 1.53e-56 - - - - - - - -
PDDFDHOE_02878 1.85e-44 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_02879 4.3e-68 - - - - - - - -
PDDFDHOE_02880 9.75e-61 - - - - - - - -
PDDFDHOE_02881 1.88e-47 - - - - - - - -
PDDFDHOE_02882 2.51e-125 - 3.2.1.17 - S ko:K01185 - ko00000,ko01000 lysozyme
PDDFDHOE_02883 7.57e-119 - - - S - - - COG NOG28378 non supervised orthologous group
PDDFDHOE_02884 4.88e-201 - - - L - - - CHC2 zinc finger domain protein
PDDFDHOE_02885 4.42e-136 - - - S - - - COG NOG19079 non supervised orthologous group
PDDFDHOE_02886 8.02e-230 - - - U - - - Conjugative transposon TraN protein
PDDFDHOE_02887 2.36e-290 traM - - S - - - Conjugative transposon TraM protein
PDDFDHOE_02888 2.29e-68 - - - S - - - Protein of unknown function (DUF3989)
PDDFDHOE_02889 4.35e-144 traK - - U - - - Conjugative transposon TraK protein
PDDFDHOE_02890 2.03e-226 traJ - - S - - - Conjugative transposon TraJ protein
PDDFDHOE_02891 1.6e-115 - - - U - - - Domain of unknown function (DUF4141)
PDDFDHOE_02892 1.76e-86 - - - S - - - COG NOG30362 non supervised orthologous group
PDDFDHOE_02893 0.0 - - - U - - - Conjugation system ATPase, TraG family
PDDFDHOE_02894 1.82e-71 - - - S - - - COG NOG30259 non supervised orthologous group
PDDFDHOE_02895 4.44e-62 - - - S - - - Psort location CytoplasmicMembrane, score
PDDFDHOE_02896 2.37e-165 - - - S - - - Conjugal transfer protein traD
PDDFDHOE_02897 2.2e-79 - - - S - - - Protein of unknown function (DUF3408)
PDDFDHOE_02898 1.47e-100 - - - S - - - Protein of unknown function (DUF3408)
PDDFDHOE_02899 1.05e-175 - - - D - - - COG NOG26689 non supervised orthologous group
PDDFDHOE_02900 1.05e-92 - - - S - - - COG NOG29380 non supervised orthologous group
PDDFDHOE_02901 1.45e-297 - - - U - - - Relaxase mobilization nuclease domain protein
PDDFDHOE_02902 0.0 - - - U - - - COG COG3505 Type IV secretory pathway, VirD4 components
PDDFDHOE_02904 4.89e-91 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_02905 0.0 - 3.6.4.12 - K ko:K03655 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Divergent AAA domain protein
PDDFDHOE_02906 1.2e-139 - - - S - - - RteC protein
PDDFDHOE_02907 2.04e-95 - - - H - - - dihydrofolate reductase family protein K00287
PDDFDHOE_02908 2.04e-309 - - - T ko:K07713 ko02020,map02020 ko00000,ko00001,ko00002,ko02022 Sigma-54 interaction domain protein
PDDFDHOE_02909 0.0 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
PDDFDHOE_02910 4.06e-20 - - - - - - - -
PDDFDHOE_02911 1.94e-142 - - - - - - - -
PDDFDHOE_02912 7.63e-156 - - - S - - - Protein of unknown function (DUF2589)
PDDFDHOE_02913 4.4e-112 - - - S - - - Protein of unknown function (DUF2589)
PDDFDHOE_02914 6e-24 - - - - - - - -
PDDFDHOE_02915 0.0 - - - S - - - The GLUG motif
PDDFDHOE_02916 0.0 - - - N - - - Fimbrillin-like
PDDFDHOE_02917 2.22e-199 - - - S - - - Fimbrillin-like
PDDFDHOE_02918 2.63e-195 - - - - - - - -
PDDFDHOE_02919 1.74e-222 - - - M - - - COG NOG27057 non supervised orthologous group
PDDFDHOE_02920 6.91e-249 - - - K - - - Psort location CytoplasmicMembrane, score
PDDFDHOE_02921 0.0 - - - L - - - Helicase C-terminal domain protein
PDDFDHOE_02922 6.71e-102 - - - S - - - COG NOG19108 non supervised orthologous group
PDDFDHOE_02923 0.0 - 5.99.1.2 - L ko:K03169 - ko00000,ko01000,ko03032 COG0550 Topoisomerase IA
PDDFDHOE_02924 0.0 - - - S - - - COG NOG09947 non supervised orthologous group
PDDFDHOE_02925 1.63e-79 - - - S - - - Helix-turn-helix domain
PDDFDHOE_02926 4.46e-74 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_02927 5.62e-63 - - - - - - - -
PDDFDHOE_02928 3.27e-65 - - - S - - - DNA binding domain, excisionase family
PDDFDHOE_02929 1.13e-81 - - - S - - - COG3943, virulence protein
PDDFDHOE_02930 7.5e-302 - - - L - - - Belongs to the 'phage' integrase family
PDDFDHOE_02931 2.83e-261 aroC 4.2.3.5 - E ko:K01736 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
PDDFDHOE_02932 0.0 dapE - - E - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_02933 1.39e-258 - 3.5.1.24 - M ko:K01442 ko00120,ko00121,ko01100,map00120,map00121,map01100 ko00000,ko00001,ko01000 Linear amide C-N hydrolase, choloylglycine hydrolase family protein
PDDFDHOE_02934 6.71e-208 - - - S - - - COG NOG34575 non supervised orthologous group
PDDFDHOE_02935 2.48e-169 - - - - - - - -
PDDFDHOE_02936 7.65e-49 - - - - - - - -
PDDFDHOE_02938 9.42e-258 - - - S ko:K07098 - ko00000 Calcineurin-like phosphoesterase superfamily domain
PDDFDHOE_02939 6.53e-294 patB 4.4.1.8 - E ko:K14155 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 ko00000,ko00001,ko01000,ko01007 COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities
PDDFDHOE_02940 3.56e-188 - - - S - - - of the HAD superfamily
PDDFDHOE_02941 0.0 - - - L - - - COG0507 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member
PDDFDHOE_02942 0.0 - - - M ko:K07289 - ko00000 protein involved in outer membrane biogenesis
PDDFDHOE_02943 3.2e-149 yciO - - J - - - Belongs to the SUA5 family
PDDFDHOE_02944 3.58e-197 nagB 3.5.99.6 - G ko:K02564 ko00520,ko01100,map00520,map01100 ko00000,ko00001,ko01000 Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
PDDFDHOE_02945 1.06e-299 fprA 1.6.3.4 - C ko:K22405 - ko00000,ko01000 anaerobic nitric oxide reductase flavorubredoxin
PDDFDHOE_02946 1.31e-242 - - - S ko:K07139 - ko00000 radical SAM protein, TIGR01212 family
PDDFDHOE_02947 0.0 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
PDDFDHOE_02948 0.0 - - - G - - - Pectate lyase superfamily protein
PDDFDHOE_02949 0.0 - - - P ko:K21572 - ko00000,ko02000 SusD family
PDDFDHOE_02950 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PDDFDHOE_02951 0.0 - - - S - - - Fibronectin type 3 domain
PDDFDHOE_02952 0.0 - - - G - - - pectinesterase activity
PDDFDHOE_02953 1.54e-182 - - - KT - - - COG COG3279 Response regulator of the LytR AlgR family
PDDFDHOE_02954 3.54e-185 - - - S - - - Psort location CytoplasmicMembrane, score
PDDFDHOE_02955 0.0 - - - G - - - pectate lyase K01728
PDDFDHOE_02956 0.0 - - - G - - - pectate lyase K01728
PDDFDHOE_02957 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PDDFDHOE_02958 0.0 - - - GM ko:K21572 - ko00000,ko02000 COG NOG31573 non supervised orthologous group
PDDFDHOE_02959 1.8e-299 - - - S - - - Domain of unknown function (DUF5123)
PDDFDHOE_02961 0.0 - - - T - - - Psort location CytoplasmicMembrane, score
PDDFDHOE_02962 0.0 rhgT_2 3.1.1.11 - EG ko:K01051 ko00040,ko01100,map00040,map01100 ko00000,ko00001,ko00002,ko01000 Psort location Extracellular, score
PDDFDHOE_02963 8.94e-224 - 3.1.1.11 - M ko:K01051 ko00040,ko01100,map00040,map01100 ko00000,ko00001,ko00002,ko01000 Pectinesterase
PDDFDHOE_02964 6.41e-306 - 3.2.1.172 GH105 G ko:K15532 - ko00000,ko01000 unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins
PDDFDHOE_02965 0.0 - - - G ko:K02775 ko00052,ko01100,ko02060,map00052,map01100,map02060 ko00000,ko00001,ko00002,ko02000 Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_02966 2.47e-222 kduI 5.3.1.17 - G ko:K01815 ko00040,map00040 ko00000,ko00001,ko01000 Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
PDDFDHOE_02968 0.0 exuT - - G ko:K08191 - ko00000,ko02000 Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_02969 0.0 - 3.6.4.12 - L ko:K10742 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 COG COG1112 Superfamily I DNA and RNA helicases and helicase subunits
PDDFDHOE_02970 2.69e-189 tatC - - U ko:K03118 ko03060,ko03070,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
PDDFDHOE_02971 2.62e-27 tatA - - U ko:K03116 ko03060,ko03070,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system
PDDFDHOE_02972 0.0 alr 5.1.1.1 - M ko:K01775 ko00473,ko01100,ko01502,map00473,map01100,map01502 ko00000,ko00001,ko01000,ko01011 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
PDDFDHOE_02973 7.02e-245 - - - E - - - GSCFA family
PDDFDHOE_02975 5.2e-188 - - - S - - - Domain of unknown function (DUF4121)
PDDFDHOE_02976 2.09e-199 - - - - - - - -
PDDFDHOE_02977 0.0 - - - L - - - N-6 DNA Methylase
PDDFDHOE_02978 2.09e-110 ard - - S - - - anti-restriction protein
PDDFDHOE_02979 4.27e-61 - - - - - - - -
PDDFDHOE_02980 6.86e-60 - - - - - - - -
PDDFDHOE_02981 6.35e-204 - - - - - - - -
PDDFDHOE_02982 2.13e-87 - - - S - - - Domain of unknown function (DUF4313)
PDDFDHOE_02983 5e-113 - - - - - - - -
PDDFDHOE_02984 3.9e-128 - - - - - - - -
PDDFDHOE_02985 5.47e-34 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_02986 4.73e-244 - - - O - - - DnaJ molecular chaperone homology domain
PDDFDHOE_02987 1.63e-170 - - - - - - - -
PDDFDHOE_02988 2.76e-139 - - - - - - - -
PDDFDHOE_02989 1.41e-70 - - - - - - - -
PDDFDHOE_02990 2.1e-68 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_02991 1.84e-209 - - - - - - - -
PDDFDHOE_02992 2.84e-120 - 3.2.1.17 - S ko:K01185 - ko00000,ko01000 lysozyme
PDDFDHOE_02993 3.87e-87 - - - S - - - Domain of unknown function, B. Theta Gene description (DUF3872)
PDDFDHOE_02994 2.1e-189 - - - L - - - CHC2 zinc finger domain protein
PDDFDHOE_02995 3.07e-122 - - - S - - - Conjugative transposon protein TraO
PDDFDHOE_02996 9.51e-217 - - - U - - - Conjugative transposon TraN protein
PDDFDHOE_02997 3.06e-247 traM - - S - - - Conjugative transposon TraM protein
PDDFDHOE_02998 8.69e-50 - - - S - - - Protein of unknown function (DUF3989)
PDDFDHOE_02999 2.32e-139 - - - U - - - Conjugative transposon TraK protein
PDDFDHOE_03000 1.37e-224 - - - S - - - Homologues of TraJ from Bacteroides conjugative transposon
PDDFDHOE_03001 4.16e-143 - - - U - - - COG NOG09946 non supervised orthologous group
PDDFDHOE_03002 2.87e-120 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_03003 3.64e-43 - - - S - - - Domain of unknown function (DUF4160)
PDDFDHOE_03008 8e-42 - 3.2.1.17 - G ko:K01185 - ko00000,ko01000 lysozyme
PDDFDHOE_03009 9.14e-77 - - - - - - - -
PDDFDHOE_03010 5.13e-114 - - - - - - - -
PDDFDHOE_03012 1.23e-246 - - - - - - - -
PDDFDHOE_03013 5.01e-32 - - - - - - - -
PDDFDHOE_03022 4.8e-29 - - - - - - - -
PDDFDHOE_03024 4.55e-291 - - - - - - - -
PDDFDHOE_03025 1.63e-114 - - - - - - - -
PDDFDHOE_03026 9.08e-32 - - - - - - - -
PDDFDHOE_03027 1.06e-84 - 2.1.1.72 - L ko:K00571 - ko00000,ko01000,ko02048 DNA methylase
PDDFDHOE_03028 6.1e-87 - - - - - - - -
PDDFDHOE_03029 2.63e-116 - - - - - - - -
PDDFDHOE_03030 0.0 - - - - - - - -
PDDFDHOE_03031 2.52e-108 - - - OU ko:K04773 - ko00000,ko01000,ko01002 Peptidase family S49
PDDFDHOE_03035 0.0 - - - L - - - DNA primase
PDDFDHOE_03040 3.65e-23 - - - - - - - -
PDDFDHOE_03042 0.0 - - - S - - - Tetratricopeptide repeat protein
PDDFDHOE_03043 2.09e-302 - - - - - - - -
PDDFDHOE_03044 1.07e-266 - 3.4.21.107 - O ko:K04771 ko01503,ko02020,map01503,map02020 ko00000,ko00001,ko00002,ko01000,ko01002,ko03110 Trypsin
PDDFDHOE_03045 1.46e-168 - - - S ko:K02651 ko04112,map04112 ko00000,ko00001,ko02035,ko02044 COG NOG28004 non supervised orthologous group
PDDFDHOE_03046 1.64e-239 pabB 2.6.1.85 - EH ko:K01665 ko00790,map00790 ko00000,ko00001,ko01000 COG COG0147 Anthranilate para-aminobenzoate synthases component I
PDDFDHOE_03047 8.88e-144 - 4.1.3.38 - EH ko:K02619 ko00790,map00790 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score 8.96
PDDFDHOE_03048 1.02e-166 - - - S - - - TIGR02453 family
PDDFDHOE_03049 9.59e-101 tabA_2 - - G - - - YhcH YjgK YiaL family protein
PDDFDHOE_03050 0.0 glgB 2.4.1.18 CBM48,GH13 G ko:K00700 ko00500,ko01100,ko01110,map00500,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko04147 1,4-alpha-glucan branching enzyme
PDDFDHOE_03051 2.13e-111 - - - S - - - COG NOG29454 non supervised orthologous group
PDDFDHOE_03052 0.0 amyA2 - - G - - - Alpha amylase, catalytic domain
PDDFDHOE_03053 2.16e-197 - - - S ko:K07001 - ko00000 esterase of the alpha-beta hydrolase superfamily
PDDFDHOE_03054 0.0 yccM_2 - - C - - - Psort location CytoplasmicMembrane, score
PDDFDHOE_03055 1.18e-227 - - - S - - - Tat pathway signal sequence domain protein
PDDFDHOE_03056 5.69e-111 - - - S - - - Psort location CytoplasmicMembrane, score 9.46
PDDFDHOE_03057 0.0 - - - P - - - Carboxypeptidase regulatory-like domain
PDDFDHOE_03058 2.21e-254 - - - F ko:K21572 - ko00000,ko02000 Pfam:SusD
PDDFDHOE_03059 1.1e-60 - - - N - - - Protein of unknown function (DUF3823)
PDDFDHOE_03060 6.19e-151 - - - M - - - Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
PDDFDHOE_03061 4.38e-216 cysK 2.5.1.47 - E ko:K01738,ko:K12339 ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the cysteine synthase cystathionine beta- synthase family
PDDFDHOE_03062 6.48e-80 - - - S - - - Cupin domain protein
PDDFDHOE_03063 0.0 - 3.2.1.80 - M ko:K03332 ko00051,map00051 ko00000,ko00001,ko01000 Glycosyl hydrolases family 32
PDDFDHOE_03064 0.0 - - - S ko:K07133 - ko00000 ATPase (AAA superfamily)
PDDFDHOE_03065 6.6e-201 - - - I - - - COG0657 Esterase lipase
PDDFDHOE_03066 0.0 - 3.2.1.177 GH31 G ko:K01811 - ko00000,ko01000 Domain of unknown function (DUF5110)
PDDFDHOE_03067 0.0 - 3.2.1.20 GH31 G ko:K01187 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 31 family
PDDFDHOE_03068 0.0 - 3.2.1.11 GH66 G ko:K05988 ko00500,map00500 ko00000,ko00001,ko01000 COG NOG34737 non supervised orthologous group
PDDFDHOE_03069 0.0 - - - S ko:K21571 - ko00000 Outer membrane protein SusF_SusE
PDDFDHOE_03070 0.0 - - - GM ko:K21572 - ko00000,ko02000 SusD family
PDDFDHOE_03071 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PDDFDHOE_03072 0.0 - - - S ko:K21557 - ko00000,ko03000 Psort location Cytoplasmic, score 8.96
PDDFDHOE_03073 0.0 - - - G - - - Glycosyl hydrolases family 2, TIM barrel domain
PDDFDHOE_03074 0.0 - 3.1.6.1 - P ko:K01130 ko00140,ko00600,map00140,map00600 ko00000,ko00001,ko01000 COG COG3119 Arylsulfatase A and related enzymes
PDDFDHOE_03075 6e-297 - - - G - - - Glycosyl hydrolase family 43
PDDFDHOE_03076 0.0 - - - P - - - COG COG3119 Arylsulfatase A and related enzymes
PDDFDHOE_03077 0.0 - - - G - - - Alpha-L-arabinofuranosidase C-terminal domain
PDDFDHOE_03078 0.0 - - - T - - - Y_Y_Y domain
PDDFDHOE_03079 4.82e-137 - - - - - - - -
PDDFDHOE_03080 4.27e-142 - - - - - - - -
PDDFDHOE_03081 7.67e-124 - - - K ko:K03088 - ko00000,ko03021 RNA polymerase sigma-70 factor
PDDFDHOE_03082 5.23e-231 - - - PT - - - Domain of unknown function (DUF4974)
PDDFDHOE_03084 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PDDFDHOE_03085 0.0 - - - S - - - COG NOG26858 non supervised orthologous group
PDDFDHOE_03086 2.26e-289 - - - G - - - Putative glycoside hydrolase Family 18, chitinase_18
PDDFDHOE_03087 6.74e-288 - - - Q - - - Concanavalin A-like lectin/glucanases superfamily
PDDFDHOE_03088 0.0 - - - S - - - Domain of unknown function (DUF4419)
PDDFDHOE_03089 8.01e-254 dinB 2.7.7.7 - L ko:K02346 - ko00000,ko01000,ko03400 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
PDDFDHOE_03090 0.0 - - - S - - - COG NOG25375 non supervised orthologous group
PDDFDHOE_03091 9.35e-161 - - - S - - - Domain of unknown function (DUF4627)
PDDFDHOE_03092 1.46e-21 - - - - - - - -
PDDFDHOE_03093 0.0 - - - E - - - Transglutaminase-like protein
PDDFDHOE_03094 1.61e-102 - - - - - - - -
PDDFDHOE_03096 1.28e-86 - - - S - - - COG NOG30410 non supervised orthologous group
PDDFDHOE_03097 4.31e-277 madB 4.1.1.3 - C ko:K01572 ko00620,ko01100,map00620,map01100 ko00000,ko00001,ko01000,ko02000 COG COG1883 Na -transporting methylmalonyl-CoA oxaloacetate decarboxylase, beta subunit
PDDFDHOE_03098 8.3e-172 cutC - - P ko:K06201 - ko00000 Participates in the control of copper homeostasis
PDDFDHOE_03099 0.0 rny - - S ko:K18682 ko03018,map03018 ko00000,ko00001,ko01000,ko03019 Endoribonuclease that initiates mRNA decay
PDDFDHOE_03100 2.47e-58 - - - D ko:K09888 - ko00000,ko03036 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
PDDFDHOE_03101 6.13e-59 - - - S - - - COG NOG23407 non supervised orthologous group
PDDFDHOE_03102 7.42e-253 - - - G - - - SMP-30/Gluconolaconase/LRE-like region
PDDFDHOE_03103 2.08e-92 - - - - - - - -
PDDFDHOE_03104 3.02e-116 - - - - - - - -
PDDFDHOE_03105 0.0 xylB 2.7.1.17 - G ko:K00854 ko00040,ko01100,map00040,map01100 ko00000,ko00001,ko00002,ko01000 Carbohydrate kinase, FGGY family protein
PDDFDHOE_03106 1.73e-246 - - - C - - - Zinc-binding dehydrogenase
PDDFDHOE_03107 2.12e-164 deoC 4.1.2.4 - F ko:K01619 ko00030,map00030 ko00000,ko00001,ko01000 Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
PDDFDHOE_03108 0.0 - - - U - - - Involved in the tonB-independent uptake of proteins
PDDFDHOE_03109 0.0 - - - C - - - cytochrome c peroxidase
PDDFDHOE_03110 5.62e-223 - - - S - - - unsaturated rhamnogalacturonyl hydrolase activity
PDDFDHOE_03111 2.91e-277 - - - J - - - endoribonuclease L-PSP
PDDFDHOE_03112 0.0 ccmC - - O - - - Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_03113 0.0 - - - JKL - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_03114 1.71e-91 - - - L - - - Bacterial DNA-binding protein
PDDFDHOE_03115 0.0 - - - V ko:K02004 - ko00000,ko00002,ko02000 Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_03116 3.84e-154 - - - V ko:K02003 - ko00000,ko00002,ko02000 bacteriocin export ABC transporter, lactococcin 972 group
PDDFDHOE_03117 0.0 - - - V ko:K02004 - ko00000,ko00002,ko02000 Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_03118 0.0 - - - V - - - Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_03119 1.99e-153 pgmB - - S - - - HAD hydrolase, family IA, variant 3
PDDFDHOE_03120 8.38e-193 panB 2.1.2.11 - H ko:K00606 ko00770,ko01100,ko01110,map00770,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate
PDDFDHOE_03121 2.32e-260 - - - EGP - - - Transporter, major facilitator family protein
PDDFDHOE_03122 0.0 relA 2.7.6.5, 3.1.7.2 - KT ko:K00951,ko:K01139 ko00230,map00230 ko00000,ko00001,ko01000,ko03009 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
PDDFDHOE_03123 0.0 - - - H - - - COG NOG06391 non supervised orthologous group
PDDFDHOE_03124 1.07e-153 cat 2.3.1.28 - V ko:K19271 - br01600,ko00000,ko01000,ko01504 Chloramphenicol acetyltransferase
PDDFDHOE_03125 1.59e-310 - - - NU - - - Lipid A 3-O-deacylase (PagL)
PDDFDHOE_03126 4.69e-282 purT 2.1.2.2 - F ko:K08289 ko00230,ko00670,ko01100,ko01110,ko01130,map00230,map00670,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
PDDFDHOE_03127 3.04e-183 - - - M - - - Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
PDDFDHOE_03128 3.38e-105 - - - V - - - N-acetylmuramoyl-L-alanine amidase
PDDFDHOE_03129 3.21e-94 - - - L - - - Bacterial DNA-binding protein
PDDFDHOE_03130 6.4e-54 - - - S - - - Domain of unknown function (DUF4248)
PDDFDHOE_03131 0.0 - - - L - - - Primase C terminal 1 (PriCT-1)
PDDFDHOE_03132 1.08e-89 - - - - - - - -
PDDFDHOE_03133 0.0 atpD 3.6.3.14 - C ko:K02112 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194,ko01000 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
PDDFDHOE_03134 5.3e-51 atpC - - C ko:K02114 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 ATP synthase, delta epsilon subunit, beta-sandwich domain protein
PDDFDHOE_03135 5.76e-82 - - - S - - - Psort location CytoplasmicMembrane, score
PDDFDHOE_03136 1.16e-265 atpB - - C ko:K02108 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194,ko03110 it plays a direct role in the translocation of protons across the membrane
PDDFDHOE_03137 1.13e-40 atpE - - C ko:K02110 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PDDFDHOE_03138 4.1e-93 atpF - - C ko:K02109 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
PDDFDHOE_03139 1.05e-127 atpH - - C ko:K02113 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PDDFDHOE_03140 0.0 atpA 3.6.3.14 - C ko:K02111 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194,ko01000 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
PDDFDHOE_03141 1.69e-200 atpG - - C ko:K02115 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
PDDFDHOE_03142 0.0 - - - S - - - COG NOG28036 non supervised orthologous group
PDDFDHOE_03143 0.0 uvrD2 - - L - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_03144 6.15e-139 - - - S - - - Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_03145 1.72e-54 - - - S - - - COG NOG18433 non supervised orthologous group
PDDFDHOE_03147 1.6e-216 rfbD 1.1.1.133 - M ko:K00067 ko00521,ko00523,ko01130,map00521,map00523,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
PDDFDHOE_03148 6.37e-278 - - - S - - - Clostripain family
PDDFDHOE_03149 9.3e-231 - - - S - - - Domain of unknown function (DUF4973)
PDDFDHOE_03150 3.62e-131 - - - G - - - Glycosyl hydrolases family 18
PDDFDHOE_03151 1.03e-253 - - - G - - - Glycosyl hydrolases family 18
PDDFDHOE_03152 2.16e-142 - - - S - - - Putative glycoside hydrolase Family 18, chitinase_18
PDDFDHOE_03153 2.72e-305 - - - S - - - Susd and RagB outer membrane lipoprotein
PDDFDHOE_03154 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PDDFDHOE_03155 8.37e-232 - - - PT - - - Sigma factor regulatory protein, FecR PupR family
PDDFDHOE_03156 1.88e-124 rpoE3 - - K ko:K03088 - ko00000,ko03021 RNA polymerase sigma-70 factor
PDDFDHOE_03157 3.27e-312 fucP - - G ko:K02429 - ko00000,ko02000 L-fucose H symporter permease
PDDFDHOE_03158 6.84e-90 - 5.1.3.32 - G ko:K03534 - ko00000,ko01000 Psort location Cytoplasmic, score 8.96
PDDFDHOE_03159 0.0 fucK 2.7.1.5, 2.7.1.51 - G ko:K00848,ko:K00879 ko00040,ko00051,ko01120,map00040,map00051,map01120 ko00000,ko00001,ko01000 Involved in the catabolism of L-rhamnose (6-deoxy-L- mannose). Catalyzes the transfer of the gamma-phosphate group from ATP to the 1-hydroxyl group of L-rhamnulose to yield L-rhamnulose 1-phosphate
PDDFDHOE_03160 2.24e-153 fucA 4.1.1.104 - G ko:K22130 - ko00000,ko01000 L-fuculose-phosphate aldolase, aldolase class II family
PDDFDHOE_03161 0.0 fucI 5.3.1.25, 5.3.1.3 - G ko:K01818 ko00051,ko01120,map00051,map01120 ko00000,ko00001,ko01000 Converts the aldose L-fucose into the corresponding ketose L-fuculose
PDDFDHOE_03162 3.44e-237 - - - K - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_03163 1.87e-88 rpsP - - J ko:K02959 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011,ko03029 Belongs to the bacterial ribosomal protein bS16 family
PDDFDHOE_03165 3.37e-291 mleN - - C ko:K03315 - ko00000,ko02000 Na H antiporter
PDDFDHOE_03166 7.83e-242 - - - M - - - Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PDDFDHOE_03167 0.0 - - - V - - - Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PDDFDHOE_03168 1.65e-303 - - - MU - - - Psort location OuterMembrane, score
PDDFDHOE_03169 2.11e-248 - - - T - - - Histidine kinase
PDDFDHOE_03170 1.34e-190 - - - K ko:K02477 - ko00000,ko02022 LytTr DNA-binding domain protein
PDDFDHOE_03171 0.0 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
PDDFDHOE_03172 1.45e-124 - 3.5.1.124 - S ko:K05520 - ko00000,ko01000,ko01002 DJ-1 PfpI family protein
PDDFDHOE_03173 3.72e-80 - - - K - - - Transcriptional regulator, HxlR family
PDDFDHOE_03174 0.0 - - - E - - - Peptidase, S9A B C family, catalytic domain protein
PDDFDHOE_03175 6.22e-242 cbh 3.5.1.24 - M ko:K01442 ko00120,ko00121,ko01100,map00120,map00121,map01100 ko00000,ko00001,ko01000 Linear amide C-N hydrolase, choloylglycine hydrolase family protein
PDDFDHOE_03176 6.77e-105 yvbK 2.3.1.82 - K ko:K03827,ko:K18815 - br01600,ko00000,ko01000,ko01504 Psort location Cytoplasmic, score 8.96
PDDFDHOE_03177 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PDDFDHOE_03178 0.0 - - - P ko:K21572 - ko00000,ko02000 SusD family
PDDFDHOE_03179 1.34e-152 - - - S - - - Protein of unknown function (DUF3823)
PDDFDHOE_03180 3.04e-287 - - - G - - - Belongs to the glycosyl hydrolase 43 family
PDDFDHOE_03181 0.0 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
PDDFDHOE_03182 6.65e-260 envC - - D - - - Peptidase, M23
PDDFDHOE_03183 7.15e-118 - - - S - - - COG NOG29315 non supervised orthologous group
PDDFDHOE_03184 0.0 - - - S - - - Tetratricopeptide repeat protein
PDDFDHOE_03185 9.69e-99 dut 3.6.1.23 - F ko:K01520 ko00240,ko00983,ko01100,map00240,map00983,map01100 ko00000,ko00001,ko00002,ko01000,ko03400 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA
PDDFDHOE_03186 0.0 dgt 3.1.5.1 - F ko:K01129 ko00230,map00230 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score
PDDFDHOE_03187 1.17e-247 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_03188 5.6e-202 - - - I - - - Acyl-transferase
PDDFDHOE_03190 9.58e-117 - - - K ko:K03088 - ko00000,ko03021 Belongs to the sigma-70 factor family. ECF subfamily
PDDFDHOE_03191 2.5e-109 mraZ - - K ko:K03925 - ko00000 Belongs to the MraZ family
PDDFDHOE_03192 7.33e-213 rsmH 2.1.1.199 - J ko:K03438 - ko00000,ko01000,ko03009 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
PDDFDHOE_03193 1.32e-38 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_03194 0.0 ftsI 3.4.16.4 - M ko:K03587 ko00550,ko01501,map00550,map01501 ko00000,ko00001,ko01000,ko01011,ko03036 Cell division protein FtsI penicillin-binding protein
PDDFDHOE_03195 0.0 murE 6.3.2.13 - M ko:K01928 ko00300,ko00550,map00300,map00550 ko00000,ko00001,ko01000,ko01011 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
PDDFDHOE_03196 2.52e-301 mraY 2.7.8.13 - M ko:K01000 ko00550,ko01100,ko01502,map00550,map01100,map01502 ko00000,ko00001,ko01000,ko01011 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
PDDFDHOE_03197 0.0 murD 6.3.2.9 - M ko:K01925 ko00471,ko00550,ko01100,map00471,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
PDDFDHOE_03198 5.68e-297 ftsW - - D ko:K03588 ko04112,map04112 ko00000,ko00001,ko02000,ko03036 Belongs to the SEDS family
PDDFDHOE_03199 7.22e-262 murG 2.4.1.227 GT28 M ko:K02563 ko00550,ko01100,ko01502,ko04112,map00550,map01100,map01502,map04112 ko00000,ko00001,ko01000,ko01011 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
PDDFDHOE_03201 0.0 murC 6.3.2.8 - M ko:K01924 ko00471,ko00550,ko01100,map00471,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Belongs to the MurCDEF family
PDDFDHOE_03202 4.14e-176 ftsQ - - M ko:K03589 ko04112,map04112 ko00000,ko00001,ko03036 Psort location Cytoplasmic, score 8.96
PDDFDHOE_03203 2.56e-309 ftsA - - D ko:K03590 ko04112,map04112 ko00000,ko00001,ko03036,ko04812 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
PDDFDHOE_03204 1.18e-292 ftsZ - - D ko:K03531 ko04112,map04112 ko00000,ko00001,ko02048,ko03036,ko04812 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
PDDFDHOE_03205 1.25e-92 - - - S ko:K09117 - ko00000 YqeY-like protein
PDDFDHOE_03208 0.0 - - - S - - - SWIM zinc finger
PDDFDHOE_03209 0.0 - - - G - - - TRAP-type C4-dicarboxylate transport system periplasmic component
PDDFDHOE_03210 2.47e-251 - - - S - - - AAA domain (dynein-related subfamily)
PDDFDHOE_03211 0.0 - - - - - - - -
PDDFDHOE_03212 6.21e-265 - - - S - - - VWA domain containing CoxE-like protein
PDDFDHOE_03213 1.66e-219 mdh 1.1.1.37 - C ko:K00024 ko00020,ko00270,ko00620,ko00630,ko00680,ko00710,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00270,map00620,map00630,map00680,map00710,map00720,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the reversible oxidation of malate to oxaloacetate
PDDFDHOE_03214 2.62e-184 - - - S - - - COG NOG11650 non supervised orthologous group
PDDFDHOE_03215 5.16e-135 - - - S - - - Domain of unknown function (DUF5034)
PDDFDHOE_03216 1.33e-223 - - - - - - - -
PDDFDHOE_03217 2.9e-226 - - - L - - - Phage integrase, N-terminal SAM-like domain
PDDFDHOE_03219 4.86e-206 nadK 2.7.1.23 - H ko:K00858 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko01000 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
PDDFDHOE_03220 7.24e-169 pdxJ 2.6.99.2 - H ko:K03474 ko00750,ko01100,map00750,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
PDDFDHOE_03221 1.09e-162 exbB - - U ko:K03561 - ko00000,ko02000 MotA TolQ ExbB proton channel family
PDDFDHOE_03222 3.08e-81 - - - U ko:K03559 - ko00000,ko02000 Transport energizing protein, ExbD TolR family
PDDFDHOE_03223 2.05e-159 - - - M - - - TonB family domain protein
PDDFDHOE_03224 6.84e-127 yajL 3.5.1.124 - S ko:K03152 - ko00000,ko01000,ko01002 Psort location Cytoplasmic, score
PDDFDHOE_03225 1.9e-153 ispD 2.7.7.60 - I ko:K00991 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP)
PDDFDHOE_03226 0.0 recG 3.6.4.12 - L ko:K03655 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
PDDFDHOE_03227 8.41e-107 ndk 2.7.4.6 - F ko:K00940 ko00230,ko00240,ko00983,ko01100,ko01110,ko01130,ko04016,map00230,map00240,map00983,map01100,map01110,map01130,map04016 ko00000,ko00001,ko00002,ko01000,ko04131 Nucleoside diphosphate kinase
PDDFDHOE_03228 4.56e-210 mepM_1 - - M - - - Peptidase, M23
PDDFDHOE_03229 3.31e-123 - - - S - - - COG NOG27206 non supervised orthologous group
PDDFDHOE_03230 1.56e-294 doxX - - S - - - Psort location CytoplasmicMembrane, score
PDDFDHOE_03231 3.97e-176 tpiA 5.3.1.1 - G ko:K01803 ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko04147 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
PDDFDHOE_03232 4.38e-102 - - - S - - - Sporulation and cell division repeat protein
PDDFDHOE_03233 8.21e-139 folE 3.5.4.16 - F ko:K01495 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko00002,ko01000 GTP cyclohydrolase I
PDDFDHOE_03234 0.0 dnaG - - L ko:K02316 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
PDDFDHOE_03235 2.21e-180 tyrA 1.3.1.12 - E ko:K00210 ko00400,ko00401,ko01100,ko01110,ko01130,ko01230,map00400,map00401,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 prephenate dehydrogenase
PDDFDHOE_03236 1.83e-259 pheB 5.4.99.5 - E ko:K04516 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score 8.96
PDDFDHOE_03237 3.25e-296 dapL 2.6.1.83 - E ko:K10206,ko:K14261 ko00300,ko01100,ko01110,ko01130,ko01230,map00300,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 COG0436 Aspartate tyrosine aromatic aminotransferase
PDDFDHOE_03238 1.07e-204 pheA 4.2.1.51 - E ko:K04518 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score
PDDFDHOE_03239 9.64e-172 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_03240 0.0 recQ2 3.6.4.12 - L ko:K03654 ko03018,map03018 ko00000,ko00001,ko01000,ko03400 ATP-dependent DNA helicase RecQ
PDDFDHOE_03241 0.0 recJ - - L ko:K07462 ko03410,ko03430,ko03440,map03410,map03430,map03440 ko00000,ko00001,ko01000,ko03400 single-stranded-DNA-specific exonuclease recJ
PDDFDHOE_03243 1.33e-46 - - - K - - - Helix-turn-helix XRE-family like proteins
PDDFDHOE_03244 7.06e-308 - 3.6.4.12 - K ko:K03655 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Putative ATP-dependent DNA helicase recG C-terminal
PDDFDHOE_03245 4.55e-222 - - - L - - - Domain of unknown function (DUF1848)
PDDFDHOE_03246 1.14e-156 - - - - - - - -
PDDFDHOE_03247 9.61e-181 - - - L - - - Viral (Superfamily 1) RNA helicase
PDDFDHOE_03248 1.42e-128 - - - - - - - -
PDDFDHOE_03249 3.24e-47 - 3.6.4.12 - K ko:K03655 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Divergent AAA domain protein
PDDFDHOE_03250 6.38e-47 - - - - - - - -
PDDFDHOE_03251 2.53e-147 - 2.3.1.28 - V ko:K19271 - br01600,ko00000,ko01000,ko01504 Chloramphenicol O-acetyltransferase
PDDFDHOE_03252 3.98e-191 - - - K - - - helix_turn_helix, arabinose operon control protein
PDDFDHOE_03253 1.1e-93 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_03254 3.73e-70 - - - S - - - Protein of unknown function (DUF3408)
PDDFDHOE_03255 8.28e-67 - - - K - - - COG NOG34759 non supervised orthologous group
PDDFDHOE_03256 4.49e-61 - - - S - - - DNA binding domain, excisionase family
PDDFDHOE_03257 5.09e-71 - - - S - - - COG3943, virulence protein
PDDFDHOE_03258 2.88e-290 - - - L - - - Arm DNA-binding domain
PDDFDHOE_03260 1.8e-288 - - - T - - - Histidine kinase-like ATPases
PDDFDHOE_03261 0.0 gadC - - E ko:K20265 ko02024,map02024 ko00000,ko00001,ko02000 Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_03262 1.47e-156 - - - P ko:K10716 - ko00000,ko02000 Ion channel
PDDFDHOE_03263 5.43e-229 glsA 3.5.1.2 - E ko:K01425 ko00220,ko00250,ko00471,ko01100,ko04724,ko04727,ko04964,ko05206,ko05230,map00220,map00250,map00471,map01100,map04724,map04727,map04964,map05206,map05230 ko00000,ko00001,ko01000 Belongs to the glutaminase family
PDDFDHOE_03264 0.0 gadB 4.1.1.15, 4.1.2.27 - E ko:K01580,ko:K01634 ko00250,ko00410,ko00430,ko00600,ko00650,ko01100,ko01110,ko01120,ko02024,ko04071,ko04727,ko04940,map00250,map00410,map00430,map00600,map00650,map01100,map01110,map01120,map02024,map04071,map04727,map04940 ko00000,ko00001,ko00002,ko01000 Belongs to the group II decarboxylase family
PDDFDHOE_03266 1.59e-115 - - - K ko:K03088 - ko00000,ko03021 Belongs to the sigma-70 factor family. ECF subfamily
PDDFDHOE_03267 5.05e-279 - - - P - - - Transporter, major facilitator family protein
PDDFDHOE_03268 4.52e-209 - - - EG - - - COG COG0697 Permeases of the drug metabolite transporter (DMT) superfamily
PDDFDHOE_03269 2.68e-87 hinT - - FG ko:K02503 - ko00000,ko04147 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family
PDDFDHOE_03270 1.14e-95 greA - - K ko:K03624 - ko00000,ko03021 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PDDFDHOE_03271 3.26e-275 - - - O - - - COG NOG14454 non supervised orthologous group
PDDFDHOE_03272 0.0 pnp 2.7.7.8 - J ko:K00962 ko00230,ko00240,ko03018,map00230,map00240,map03018 ko00000,ko00001,ko00002,ko01000,ko03016,ko03019 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction
PDDFDHOE_03273 3.18e-97 - - - K ko:K03088 - ko00000,ko03021 RNA polymerase sigma-70 factor
PDDFDHOE_03274 3.67e-227 - - - PT - - - Sigma factor regulatory protein, FecR PupR family
PDDFDHOE_03275 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PDDFDHOE_03276 0.0 - - - S - - - COG NOG26858 non supervised orthologous group
PDDFDHOE_03277 6.54e-63 - - - S - - - COG NOG19094 non supervised orthologous group
PDDFDHOE_03279 3.51e-187 batE - - T - - - COG NOG22299 non supervised orthologous group
PDDFDHOE_03280 0.0 batD - - S - - - COG NOG06393 non supervised orthologous group
PDDFDHOE_03281 4.33e-127 batC - - S - - - Tetratricopeptide repeat protein
PDDFDHOE_03282 2.32e-236 batB - - S ko:K07114 - ko00000,ko02000 Von Willebrand factor type A domain
PDDFDHOE_03283 2.48e-228 batA - - S ko:K07114 - ko00000,ko02000 Von Willebrand factor type A domain
PDDFDHOE_03284 4.22e-248 - - - O - - - Psort location CytoplasmicMembrane, score
PDDFDHOE_03285 1.16e-207 - - - S - - - protein (some members contain a von Willebrand factor type A (vWA) domain)
PDDFDHOE_03286 4.12e-229 moxR - - S ko:K03924 - ko00000,ko01000 ATPase family associated with various cellular activities (AAA)
PDDFDHOE_03287 1.82e-235 - - - L - - - Belongs to the bacterial histone-like protein family
PDDFDHOE_03288 2.56e-55 himA - - L ko:K03530,ko:K04764 - ko00000,ko03032,ko03036,ko03400 COG0776 Bacterial nucleoid DNA-binding protein
PDDFDHOE_03289 0.0 rimO 2.8.4.4 - J ko:K14441 - ko00000,ko01000,ko03009 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12
PDDFDHOE_03290 5.58e-221 ftsY - - U ko:K03110 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
PDDFDHOE_03291 1.54e-28 - - - S - - - Domain of unknown function (DUF4295)
PDDFDHOE_03292 1e-35 rpmG - - J ko:K02913 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL33 family
PDDFDHOE_03293 2.83e-57 rpmB - - J ko:K02902 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL28 family
PDDFDHOE_03294 2.79e-276 cinA 3.5.1.42 - S ko:K03742,ko:K03743 ko00760,map00760 ko00000,ko00001,ko01000 Belongs to the CinA family
PDDFDHOE_03295 6.5e-246 tsaD 2.3.1.234 - O ko:K01409 - ko00000,ko01000,ko03016 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
PDDFDHOE_03296 0.0 - - - S - - - Psort location OuterMembrane, score 9.49
PDDFDHOE_03297 5.76e-210 - - - S - - - COG NOG14441 non supervised orthologous group
PDDFDHOE_03298 7.07e-97 - - - S - - - COG NOG14442 non supervised orthologous group
PDDFDHOE_03300 5.55e-267 - - - S - - - NPCBM-associated, NEW3 domain of alpha-galactosidase
PDDFDHOE_03301 1.28e-174 yxlF_1 - - V ko:K01990 - ko00000,ko00002,ko02000 Psort location Cytoplasmic, score 9.12
PDDFDHOE_03302 4.42e-217 - - - S ko:K01992 - ko00000,ko00002,ko02000 COG COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component
PDDFDHOE_03303 3.88e-270 qseC - - T - - - Psort location CytoplasmicMembrane, score
PDDFDHOE_03304 3.28e-157 - - - K - - - COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PDDFDHOE_03305 0.0 proS 6.1.1.15 - J ko:K01881 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro)
PDDFDHOE_03307 0.0 - - - MU - - - Psort location OuterMembrane, score
PDDFDHOE_03308 1.54e-223 - - - M ko:K01993 - ko00000 Auxiliary transport protein, membrane fusion protein
PDDFDHOE_03309 6.76e-269 - - - CP ko:K01992 - ko00000,ko00002,ko02000 ABC-2 family transporter protein
PDDFDHOE_03310 4.78e-271 - - - V ko:K01992 - ko00000,ko00002,ko02000 Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_03311 4.58e-200 - - - U - - - COG COG3505 Type IV secretory pathway, VirD4 components
PDDFDHOE_03312 4.62e-251 - - - U - - - Relaxase mobilization nuclease domain protein
PDDFDHOE_03313 4.98e-95 - - - - - - - -
PDDFDHOE_03314 8.18e-130 - - - D - - - ATPase MipZ
PDDFDHOE_03315 6.62e-35 - - - S - - - Protein of unknown function (DUF3408)
PDDFDHOE_03317 1.85e-64 - - - S - - - Domain of unknown function (DUF4122)
PDDFDHOE_03318 5.86e-68 - - - - - - - -
PDDFDHOE_03319 3.09e-62 - - - S - - - Domain of unknown function (DUF4134)
PDDFDHOE_03320 3.96e-75 - - - S - - - Domain of unknown function (DUF4133)
PDDFDHOE_03321 0.0 - - - U - - - conjugation system ATPase
PDDFDHOE_03322 6.97e-144 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_03323 1.4e-146 - - - U - - - COG NOG09946 non supervised orthologous group
PDDFDHOE_03324 4.66e-232 traJ - - S - - - Conjugative transposon TraJ protein
PDDFDHOE_03325 1.92e-147 - - - U - - - Conjugative transposon TraK protein
PDDFDHOE_03326 1.51e-61 - - - S - - - Protein of unknown function (DUF3989)
PDDFDHOE_03327 8.92e-290 traM - - S - - - Conjugative transposon TraM protein
PDDFDHOE_03328 9.02e-229 - - - U - - - Domain of unknown function (DUF4138)
PDDFDHOE_03329 4.94e-128 - - - S - - - Conjugative transposon protein TraO
PDDFDHOE_03330 4.24e-216 - - - L - - - CHC2 zinc finger domain protein
PDDFDHOE_03331 8.8e-118 - - - S - - - Domain of unknown function, B. Theta Gene description (DUF3872)
PDDFDHOE_03332 5.1e-118 - 3.2.1.17 - S ko:K01185 - ko00000,ko01000 lysozyme
PDDFDHOE_03333 4.72e-267 - - - L - - - Domain of unknown function (DUF1848)
PDDFDHOE_03334 1.73e-218 - - - - - - - -
PDDFDHOE_03335 7.58e-71 - - - S - - - Domain of unknown function (DUF4120)
PDDFDHOE_03336 1.46e-63 - - - - - - - -
PDDFDHOE_03337 6.73e-152 - - - - - - - -
PDDFDHOE_03338 6.58e-74 - - - - - - - -
PDDFDHOE_03339 8.18e-269 - - - O - - - DnaJ molecular chaperone homology domain
PDDFDHOE_03340 1.61e-44 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_03341 2.63e-136 - - - - - - - -
PDDFDHOE_03342 3.86e-49 - - - - - - - -
PDDFDHOE_03343 3.34e-132 - - - - - - - -
PDDFDHOE_03344 9.68e-119 - - - S - - - Domain of unknown function (DUF4313)
PDDFDHOE_03345 1.14e-229 - - - - - - - -
PDDFDHOE_03346 2.12e-63 - - - - - - - -
PDDFDHOE_03347 8.22e-72 - - - - - - - -
PDDFDHOE_03348 1.09e-120 ard - - S - - - anti-restriction protein
PDDFDHOE_03349 3.92e-305 - - - L - - - N-6 DNA Methylase
PDDFDHOE_03350 0.0 - - - L - - - N-6 DNA Methylase
PDDFDHOE_03351 1.14e-226 - - - - - - - -
PDDFDHOE_03352 7.59e-211 - - - S - - - Domain of unknown function (DUF4121)
PDDFDHOE_03354 1.07e-82 - - - S - - - Thiol-activated cytolysin
PDDFDHOE_03355 8.82e-214 - - - M - - - COG COG1082 Sugar phosphate isomerases epimerases
PDDFDHOE_03356 4.91e-185 - - - G - - - COG NOG16664 non supervised orthologous group
PDDFDHOE_03357 9.46e-159 - - - K - - - - catabolite gene activator and regulatory subunit of cAMP-dependent protein
PDDFDHOE_03358 1.85e-127 marC - - U ko:K05595 - ko00000,ko02000 UPF0056 membrane protein
PDDFDHOE_03359 2.13e-151 - - - S - - - Psort location CytoplasmicMembrane, score
PDDFDHOE_03360 0.0 - - - G - - - glycogen debranching enzyme, archaeal type
PDDFDHOE_03361 0.0 gmhA 2.4.1.346 GT4 M ko:K13668 - ko00000,ko01000,ko01003 Glycosyltransferase, group 1 family protein
PDDFDHOE_03362 0.0 amyA 3.2.1.1 GH57 G ko:K07405 ko00500,ko01100,map00500,map01100 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 57 family
PDDFDHOE_03363 0.0 - - - S - - - Domain of unknown function (DUF4270)
PDDFDHOE_03364 2.42e-199 glgA 2.4.1.21 GT5 G ko:K00703 ko00500,ko01100,ko01110,ko02026,map00500,map01100,map01110,map02026 ko00000,ko00001,ko00002,ko01000,ko01003 Starch synthase, catalytic domain
PDDFDHOE_03365 9.86e-201 panC 6.3.2.1 - H ko:K01918 ko00410,ko00770,ko01100,ko01110,map00410,map00770,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
PDDFDHOE_03366 5.05e-79 panD 4.1.1.11 - H ko:K01579 ko00410,ko00770,ko01100,ko01110,map00410,map00770,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
PDDFDHOE_03367 0.0 gltA 1.3.1.1, 1.4.1.13, 1.4.1.14 - C ko:K00266,ko:K17722 ko00240,ko00250,ko00410,ko00770,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00240,map00250,map00410,map00770,map00910,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score 9.97
PDDFDHOE_03368 1.24e-269 gluP - - G ko:K02429 - ko00000,ko02000 Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_03369 6.77e-307 serS 6.1.1.11 - J ko:K01875 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Psort location Cytoplasmic, score
PDDFDHOE_03370 1.05e-58 rpmA - - J ko:K02899 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL27 family
PDDFDHOE_03371 1.66e-67 rplU - - J ko:K02888 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This protein binds to 23S rRNA in the presence of protein L20
PDDFDHOE_03372 9.86e-153 ppaX 3.1.3.18 - V ko:K01091 ko00630,ko01100,ko01110,ko01130,map00630,map01100,map01110,map01130 ko00000,ko00001,ko01000 HAD hydrolase, family IA, variant 1
PDDFDHOE_03373 6.22e-210 - - - S ko:K09973 - ko00000 GumN protein
PDDFDHOE_03374 2.53e-118 mepS 3.4.17.13 - M ko:K13694 - ko00000,ko01000,ko01002,ko01011 NlpC P60 family
PDDFDHOE_03375 2.69e-165 - - - V ko:K01990 - ko00000,ko00002,ko02000 COG1131 ABC-type multidrug transport system ATPase component
PDDFDHOE_03376 0.0 - - - S - - - Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_03377 0.0 - - - S ko:K07263 - ko00000,ko01000,ko01002 Belongs to the peptidase M16 family
PDDFDHOE_03378 2.13e-187 kdsA 2.5.1.55 - H ko:K01627 ko00540,ko01100,map00540,map01100 ko00000,ko00001,ko00002,ko01000,ko01005 Belongs to the KdsA family
PDDFDHOE_03379 9.77e-230 - - - I - - - lipid kinase, YegS Rv2252 BmrU family
PDDFDHOE_03380 2.47e-222 miaA2 2.5.1.75 - F ko:K00791 ko00908,ko01100,ko01110,map00908,map01100,map01110 ko00000,ko00001,ko01000,ko01006,ko03016 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
PDDFDHOE_03381 0.0 - - - P - - - COG NOG29071 non supervised orthologous group
PDDFDHOE_03382 1.06e-280 - - - V - - - Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_03383 9.44e-153 - - - V ko:K02003 - ko00000,ko00002,ko02000 COG1136 ABC-type antimicrobial peptide transport system ATPase component
PDDFDHOE_03384 0.0 - - - S - - - COG NOG26882 non supervised orthologous group
PDDFDHOE_03385 3.05e-170 rsmE 2.1.1.193 - J ko:K09761 - ko00000,ko01000,ko03009 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
PDDFDHOE_03386 1.64e-130 - - - S ko:K08999 - ko00000 Conserved protein
PDDFDHOE_03387 8.27e-297 nupG - - G ko:K03289,ko:K11537 - ko00000,ko02000 transport of nucleosides, permease protein K03289
PDDFDHOE_03388 4.98e-295 rlmI 2.1.1.191 - J ko:K06969 - ko00000,ko01000,ko03009 SAM-dependent
PDDFDHOE_03389 1.69e-150 rnd - - L - - - 3'-5' exonuclease
PDDFDHOE_03390 4.17e-132 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_03391 0.0 ftsK - - D ko:K03466 - ko00000,ko03036 COG1674 DNA segregation ATPase FtsK SpoIIIE and related
PDDFDHOE_03392 4.14e-146 lolA - - M ko:K03634 - ko00000 COG NOG19151 non supervised orthologous group
PDDFDHOE_03393 3.68e-229 trxB 1.8.1.9 - C ko:K00384 ko00450,map00450 ko00000,ko00001,ko01000 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
PDDFDHOE_03394 0.0 - 3.2.1.52 GH20 G ko:K12373 ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142 ko00000,ko00001,ko00002,ko01000,ko03110 Glycosyl hydrolase family 20, catalytic domain
PDDFDHOE_03395 3.9e-154 - - - K ko:K21556 - ko00000,ko03000 - catabolite gene activator and regulatory subunit of cAMP-dependent protein
PDDFDHOE_03396 0.0 glnA 6.3.1.2 - S ko:K01915 ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727 ko00000,ko00001,ko01000,ko04147 Glutamate--ammonia ligase, catalytic domain protein
PDDFDHOE_03397 1.81e-97 - - - - - - - -
PDDFDHOE_03398 0.0 - - - S - - - COG NOG25960 non supervised orthologous group
PDDFDHOE_03399 4.94e-267 - - - L - - - Reverse transcriptase (RNA-dependent DNA polymerase)
PDDFDHOE_03400 0.0 recD2_4 - - L - - - COG COG1112 Superfamily I DNA and RNA helicases and helicase subunits
PDDFDHOE_03401 0.0 rpsA - - J ko:K02945 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence
PDDFDHOE_03402 4.67e-232 rnz 3.1.26.11 - S ko:K00784 ko03013,map03013 ko00000,ko00001,ko01000,ko03016 Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
PDDFDHOE_03403 5.62e-126 - - - K ko:K03088 - ko00000,ko03021 Belongs to the sigma-70 factor family. ECF subfamily
PDDFDHOE_03404 2.8e-79 - - - S - - - COG NOG23405 non supervised orthologous group
PDDFDHOE_03405 2.92e-103 - - - S - - - COG NOG28735 non supervised orthologous group
PDDFDHOE_03406 1.34e-188 mazG 3.6.1.66 - S ko:K02428 ko00230,map00230 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score 8.96
PDDFDHOE_03407 2.4e-258 - - - S - - - Psort location CytoplasmicMembrane, score
PDDFDHOE_03408 1.7e-148 - - - S - - - Psort location CytoplasmicMembrane, score 9.46
PDDFDHOE_03409 0.0 valS 6.1.1.9 - J ko:K01873 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
PDDFDHOE_03410 0.0 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
PDDFDHOE_03411 4.39e-127 - - - K ko:K03088 - ko00000,ko03021 RNA polymerase sigma-70 factor
PDDFDHOE_03412 1.07e-241 - - - PT - - - Sigma factor regulatory protein, FecR PupR family
PDDFDHOE_03413 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PDDFDHOE_03414 0.0 - - - E - - - Pfam:SusD
PDDFDHOE_03415 0.0 - 3.2.1.50 - G ko:K01205 ko00531,ko01100,ko04142,map00531,map01100,map04142 ko00000,ko00001,ko00002,ko01000,ko04147 Alpha-N-acetylglucosaminidase
PDDFDHOE_03416 3.75e-98 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_03417 1.2e-263 - - - S - - - COG NOG26558 non supervised orthologous group
PDDFDHOE_03418 0.0 secA - - U ko:K03070 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
PDDFDHOE_03419 0.0 pafA - - P - - - type I phosphodiesterase nucleotide pyrophosphatase
PDDFDHOE_03420 1.38e-273 - - - S - - - Psort location CytoplasmicMembrane, score
PDDFDHOE_03421 4.24e-162 coaX 2.7.1.33 - F ko:K03525 ko00770,ko01100,map00770,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
PDDFDHOE_03422 6e-304 - - - I - - - Psort location OuterMembrane, score
PDDFDHOE_03423 1.02e-310 - - - S - - - Tetratricopeptide repeat protein
PDDFDHOE_03424 8.57e-139 - - - S - - - Lipopolysaccharide-assembly, LptC-related
PDDFDHOE_03425 2.88e-289 tlyC - - S ko:K03699 - ko00000,ko02042 Psort location CytoplasmicMembrane, score
PDDFDHOE_03426 0.0 ppiD 5.2.1.8 - O ko:K01802,ko:K03770 - ko00000,ko01000,ko03110 COG NOG26630 non supervised orthologous group
PDDFDHOE_03427 3.78e-248 rlmN 2.1.1.192 - J ko:K06941 - ko00000,ko01000,ko03009 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs
PDDFDHOE_03428 1.43e-252 - - - L - - - COG NOG11654 non supervised orthologous group
PDDFDHOE_03429 3.32e-263 pdxA 1.1.1.262 - C ko:K00097 ko00750,ko01100,map00750,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the PdxA family
PDDFDHOE_03430 3.37e-290 fhlA - - K - - - Sigma-54 interaction domain protein
PDDFDHOE_03431 1.57e-119 lptE - - S - - - COG NOG14471 non supervised orthologous group
PDDFDHOE_03432 2.52e-169 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_03433 1.84e-65 secG - - U ko:K03075 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Preprotein translocase SecG subunit
PDDFDHOE_03434 0.0 - - - G - - - Transporter, major facilitator family protein
PDDFDHOE_03435 1.07e-79 pqqD - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_03436 2.48e-62 - - - - - - - -
PDDFDHOE_03437 1.32e-248 - - - S - - - COG NOG25792 non supervised orthologous group
PDDFDHOE_03438 0.0 nnrD 4.2.1.136, 5.1.99.6 - H ko:K17758,ko:K17759 - ko00000,ko01000 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
PDDFDHOE_03440 3.36e-46 - - - S - - - Winged helix-turn-helix domain (DUF2582)
PDDFDHOE_03441 0.0 - - - P ko:K03305 - ko00000 Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_03442 1.69e-120 hpt 2.4.2.8 - F ko:K00760 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 ko00000,ko00001,ko01000 Belongs to the purine pyrimidine phosphoribosyltransferase family
PDDFDHOE_03443 2.46e-132 adk 2.7.4.3 - F ko:K00939 ko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000,ko04147 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
PDDFDHOE_03444 1.73e-268 obg - - S ko:K03979 - ko00000,ko01000,ko03009 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
PDDFDHOE_03445 2.35e-186 - - - S ko:K05810 - ko00000,ko01000 Belongs to the multicopper oxidase YfiH RL5 family
PDDFDHOE_03446 1.98e-156 - - - S - - - B3 4 domain protein
PDDFDHOE_03447 8.42e-149 nlpD_2 - - M - - - COG COG0739 Membrane proteins related to metalloendopeptidases
PDDFDHOE_03448 0.0 - 3.2.1.52 GH20 G ko:K12373 ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142 ko00000,ko00001,ko00002,ko01000,ko03110 Glycosyl hydrolase family 20, catalytic domain
PDDFDHOE_03449 0.0 - 3.2.1.35 - G ko:K01197 ko00531,ko01100,map00531,map01100 ko00000,ko00001,ko00002,ko00536,ko00537,ko01000,ko02042 beta-N-acetylglucosaminidase
PDDFDHOE_03450 2.89e-220 - - - K - - - AraC-like ligand binding domain
PDDFDHOE_03451 0.0 xylE - - P ko:K02100,ko:K03444,ko:K08138 - ko00000,ko02000 Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family
PDDFDHOE_03452 0.0 - - - S - - - Tetratricopeptide repeat protein
PDDFDHOE_03453 6.4e-282 pgl 3.1.1.31 - G ko:K07404 ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 COG2706 3-carboxymuconate cyclase
PDDFDHOE_03454 3.5e-70 - - - S - - - COG NOG19145 non supervised orthologous group
PDDFDHOE_03463 0.0 - - - L - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_03464 2.18e-220 - - - L - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_03465 1.75e-38 - - - L - - - COG NOG22337 non supervised orthologous group
PDDFDHOE_03466 1.14e-254 - - - T - - - COG NOG25714 non supervised orthologous group
PDDFDHOE_03467 7.7e-67 - - - S - - - Protein of unknown function (DUF3853)
PDDFDHOE_03468 2.63e-243 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_03469 2.59e-314 - - - L - - - Belongs to the 'phage' integrase family
PDDFDHOE_03470 9.96e-212 - 2.7.4.1 - S ko:K22468 ko00190,ko03018,map00190,map03018 ko00000,ko00001,ko01000,ko03019 Polyphosphate kinase 2 (PPK2)
PDDFDHOE_03471 1.15e-59 - - - - - - - -
PDDFDHOE_03472 3.75e-119 - - - J - - - Acetyltransferase (GNAT) domain
PDDFDHOE_03473 1.24e-173 - - - J - - - Psort location Cytoplasmic, score
PDDFDHOE_03474 3.02e-24 - - - - - - - -
PDDFDHOE_03475 7.23e-51 - - - S - - - COG COG0724 RNA-binding proteins (RRM domain)
PDDFDHOE_03476 2.94e-73 - - - S ko:K07001 - ko00000 Phospholipase, patatin family
PDDFDHOE_03477 0.0 glnA 6.3.1.2 - E ko:K01915 ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727 ko00000,ko00001,ko01000,ko04147 Glutamate--ammonia ligase, catalytic domain protein
PDDFDHOE_03478 3.72e-29 - - - - - - - -
PDDFDHOE_03479 6.13e-174 - - - S - - - Domain of unknown function (DUF4396)
PDDFDHOE_03480 3.17e-199 sucD 6.2.1.5 - C ko:K01902 ko00020,ko00640,ko00660,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00640,map00660,map00720,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
PDDFDHOE_03481 3.08e-265 sucC 6.2.1.5 - F ko:K01903 ko00020,ko00640,ko00660,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00640,map00660,map00720,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit
PDDFDHOE_03482 1.93e-209 fabD 2.3.1.39 - I ko:K00645 ko00061,ko00333,ko01100,ko01130,ko01212,map00061,map00333,map01100,map01130,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 malonyl CoA-acyl carrier protein transacylase
PDDFDHOE_03483 2.6e-194 thiD 2.7.1.49, 2.7.4.7 - H ko:K00941 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko00002,ko01000 COG0351 Hydroxymethylpyrimidine phosphomethylpyrimidine kinase
PDDFDHOE_03484 4.18e-171 - - - F - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_03485 0.0 xylB_2 2.7.1.17 - G ko:K00854 ko00040,ko01100,map00040,map01100 ko00000,ko00001,ko00002,ko01000 Carbohydrate kinase, FGGY family protein
PDDFDHOE_03486 0.0 xylA 5.3.1.5 - G ko:K01805 ko00040,ko00051,ko01100,map00040,map00051,map01100 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score
PDDFDHOE_03487 0.0 - - - P ko:K08138 - ko00000,ko02000 Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family
PDDFDHOE_03488 4.19e-146 - - - L - - - Bacterial DNA-binding protein
PDDFDHOE_03489 1.97e-315 - - - S - - - Domain of unknonw function from B. Theta Gene description (DUF3874)
PDDFDHOE_03490 7.47e-70 - - - K - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_03491 5.49e-42 - - - CO - - - Thioredoxin domain
PDDFDHOE_03492 1.72e-98 - - - - - - - -
PDDFDHOE_03493 2.75e-154 - - - CO - - - Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_03494 8.06e-74 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_03495 0.0 - 3.6.3.16 - D ko:K01551 - ko00000,ko01000,ko02000 Anion-transporting ATPase
PDDFDHOE_03496 7.13e-234 - - - P ko:K03325 - ko00000,ko02000 Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_03497 0.0 ramA_2 - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_03498 7.53e-241 yhiM - - S - - - Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_03499 0.0 ileS 6.1.1.5 - J ko:K01870 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
PDDFDHOE_03500 2.94e-80 yocK - - T - - - RNA polymerase-binding protein DksA
PDDFDHOE_03501 5.26e-155 lspA 3.4.23.36 - MU ko:K03101 ko03060,map03060 ko00000,ko00001,ko01000,ko01002 This protein specifically catalyzes the removal of signal peptides from prolipoproteins
PDDFDHOE_03502 7.16e-224 - - - S - - - COG NOG25370 non supervised orthologous group
PDDFDHOE_03503 1.58e-79 - - - - - - - -
PDDFDHOE_03504 4.13e-178 aviRb - - J ko:K03437 - ko00000,ko03016 RNA methyltransferase, TrmH
PDDFDHOE_03505 6.57e-173 - - - M ko:K01991 ko02026,map02026 ko00000,ko00001,ko02000 COG1596 Periplasmic protein involved in polysaccharide export
PDDFDHOE_03506 0.0 - - - DM - - - Chain length determinant protein
PDDFDHOE_03507 2.06e-46 - - - S - - - Domain of unknown function (DUF4248)
PDDFDHOE_03508 1.26e-100 - 3.5.1.28 - V ko:K01447 - ko00000,ko01000 Psort location Cytoplasmic, score 8.96
PDDFDHOE_03510 6.25e-112 - - - L - - - regulation of translation
PDDFDHOE_03511 0.0 - - - L - - - Protein of unknown function (DUF3987)
PDDFDHOE_03512 2.2e-83 - - - - - - - -
PDDFDHOE_03513 2.27e-49 - - - S - - - COG NOG35393 non supervised orthologous group
PDDFDHOE_03514 1.4e-52 - - - S - - - COG NOG30994 non supervised orthologous group
PDDFDHOE_03515 8.36e-38 - - - S - - - COG NOG35214 non supervised orthologous group
PDDFDHOE_03516 2.39e-179 ydfG - - S - - - Belongs to the short-chain dehydrogenases reductases (SDR) family
PDDFDHOE_03517 2.12e-89 - - - D - - - Sporulation and cell division repeat protein
PDDFDHOE_03518 1.63e-192 cysQ 3.1.3.7 - P ko:K01082 ko00920,ko01100,ko01120,ko01130,map00920,map01100,map01120,map01130 ko00000,ko00001,ko01000,ko03016 3'(2'),5'-bisphosphate nucleotidase
PDDFDHOE_03519 0.0 - - - P - - - Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_03520 4.9e-138 cysC 2.7.1.25 - F ko:K00860 ko00230,ko00920,ko01100,ko01120,map00230,map00920,map01100,map01120 ko00000,ko00001,ko00002,ko01000 Catalyzes the synthesis of activated sulfate
PDDFDHOE_03521 5.19e-222 cysD 2.7.7.4 - H ko:K00957 ko00230,ko00261,ko00450,ko00920,ko01100,ko01120,ko01130,map00230,map00261,map00450,map00920,map01100,map01120,map01130 ko00000,ko00001,ko00002,ko01000 COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase) FAD synthetase
PDDFDHOE_03522 0.0 cysN 2.7.1.25, 2.7.7.4 - H ko:K00955,ko:K00956 ko00230,ko00261,ko00450,ko00920,ko01100,ko01120,ko01130,map00230,map00261,map00450,map00920,map01100,map01120,map01130 ko00000,ko00001,ko00002,ko01000 Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN NodQ subfamily
PDDFDHOE_03523 9e-279 - - - S - - - Sulfotransferase family
PDDFDHOE_03524 6.89e-236 - - - S - - - COG NOG26583 non supervised orthologous group
PDDFDHOE_03526 2.22e-272 - - - M - - - Psort location OuterMembrane, score
PDDFDHOE_03527 9.11e-92 ruvX - - L ko:K07447 - ko00000,ko01000 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
PDDFDHOE_03528 3.26e-130 def 3.5.1.88 - J ko:K01462 - ko00000,ko01000 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
PDDFDHOE_03529 1.17e-200 - - - S - - - COG COG0457 FOG TPR repeat
PDDFDHOE_03530 0.0 thrS 6.1.1.3 - J ko:K01868 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
PDDFDHOE_03531 1.84e-133 infC - - J ko:K02520 - ko00000,ko03012,ko03029 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
PDDFDHOE_03532 5.22e-37 rpmI - - J ko:K02916 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL35 family
PDDFDHOE_03533 6.17e-75 rplT - - J ko:K02887 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
PDDFDHOE_03534 2.33e-195 - - - C - - - 4Fe-4S binding domain protein
PDDFDHOE_03535 4.41e-131 xpt 2.4.2.22 - F ko:K03816 ko00230,ko01100,ko01110,map00230,map01100,map01110 ko00000,ko00001,ko01000 Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
PDDFDHOE_03536 1.1e-313 paaK 6.2.1.30 - H ko:K01912 ko00360,ko01120,ko05111,map00360,map01120,map05111 ko00000,ko00001,ko01000 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
PDDFDHOE_03537 8.86e-133 iorB 1.2.7.8 - C ko:K00180 - br01601,ko00000,ko01000 COG1014 Pyruvate ferredoxin oxidoreductase and related 2-oxoacid ferredoxin
PDDFDHOE_03538 0.0 iorA 1.2.7.8 - C ko:K00179 - br01601,ko00000,ko01000 Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates
PDDFDHOE_03539 3.15e-256 mltG - - S ko:K07082 - ko00000 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
PDDFDHOE_03540 1.22e-215 nucA_1 - - F ko:K01173 ko04210,map04210 ko00000,ko00001,ko03029 Psort location Extracellular, score
PDDFDHOE_03542 2.46e-291 nagC 2.7.1.2 - GK ko:K00845 ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score
PDDFDHOE_03543 1.44e-68 - - - S - - - MAC/Perforin domain
PDDFDHOE_03544 1.35e-153 - - - S - - - Glycosyltransferase, group 2 family protein
PDDFDHOE_03545 7.84e-79 - - - S - - - Glycosyl transferase family 2
PDDFDHOE_03546 1.44e-159 - - - M - - - Glycosyl transferases group 1
PDDFDHOE_03547 7.72e-279 - - - M - - - Glycosyl transferases group 1
PDDFDHOE_03548 2.91e-280 - - - M - - - Glycosyl transferases group 1
PDDFDHOE_03549 7.62e-248 - - - M - - - Glycosyltransferase like family 2
PDDFDHOE_03550 0.0 - - - M - - - Glycosyltransferase like family 2
PDDFDHOE_03551 9.79e-185 - - - T - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_03552 6.57e-234 lpsA - - S - - - Glycosyl transferase family 90
PDDFDHOE_03553 1.23e-252 - - GT9 M ko:K02843 ko00540,ko01100,map00540,map01100 ko00000,ko00001,ko00002,ko01000,ko01003,ko01005 Glycosyltransferase family 9
PDDFDHOE_03554 1.85e-142 - - - M - - - Protein of unknown function (DUF4254)
PDDFDHOE_03555 2.11e-249 pdxB 1.1.1.290 - H ko:K03473 ko00750,ko01100,map00750,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the oxidation of erythronate-4-phosphate to 3- hydroxy-2-oxo-4-phosphonooxybutanoate
PDDFDHOE_03556 1.91e-145 purN 2.1.2.2 - F ko:K11175 ko00230,ko00670,ko01100,ko01110,ko01130,map00230,map00670,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
PDDFDHOE_03557 7.43e-45 acpP - - IQ ko:K02078 - ko00000,ko00001 Carrier of the growing fatty acid chain in fatty acid biosynthesis
PDDFDHOE_03558 7.18e-301 fabF 2.3.1.179 - I ko:K09458 ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
PDDFDHOE_03559 1.25e-191 rnc 3.1.26.3 - J ko:K03685 ko03008,ko05205,map03008,map05205 ko00000,ko00001,ko01000,ko03009,ko03019,ko03036 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
PDDFDHOE_03560 1.41e-243 pfkA 2.7.1.11, 2.7.1.90 - F ko:K21071 ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130 ko00000,ko00001,ko01000 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
PDDFDHOE_03561 0.0 - - - H - - - GH3 auxin-responsive promoter
PDDFDHOE_03562 4.95e-270 mnmA 2.8.1.13 - J ko:K00566 ko04122,map04122 ko00000,ko00001,ko01000,ko03016 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
PDDFDHOE_03563 0.0 - 2.7.11.1 - L ko:K08282 - ko00000,ko01000 SNF2 family N-terminal domain
PDDFDHOE_03564 3.16e-191 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_03565 0.0 cysS 6.1.1.16 - J ko:K01883 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the class-I aminoacyl-tRNA synthetase family
PDDFDHOE_03566 0.0 - 4.2.2.20, 4.2.2.21 - H ko:K08961 - ko00000,ko01000 Chondroitin sulfate ABC lyase
PDDFDHOE_03567 0.0 aslA - - P - - - COG COG3119 Arylsulfatase A and related enzymes
PDDFDHOE_03568 1.46e-307 - - - O - - - Glycosyl Hydrolase Family 88
PDDFDHOE_03569 6.59e-294 sbcD - - L ko:K03547 - ko00000,ko03400 SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity
PDDFDHOE_03570 0.0 sbcC - - L ko:K03546 - ko00000,ko03400 COG0419 ATPase involved in DNA repair
PDDFDHOE_03571 7.78e-281 - - - S ko:K07098 - ko00000 Ser Thr phosphatase family protein
PDDFDHOE_03572 2.25e-125 - - - S - - - Psort location CytoplasmicMembrane, score
PDDFDHOE_03573 2.74e-117 - - - K ko:K03088 - ko00000,ko03021 Belongs to the sigma-70 factor family. ECF subfamily
PDDFDHOE_03574 3.5e-219 metH_2 - - E - - - Vitamin B12 dependent methionine synthase, activation domain
PDDFDHOE_03575 0.0 pyrC 3.5.2.3 - F ko:K01465 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score
PDDFDHOE_03576 1.45e-180 dpm1 2.4.1.83 GT2 S ko:K00721 ko00510,ko01100,map00510,map01100 ko00000,ko00001,ko01000,ko01003 b-glycosyltransferase, glycosyltransferase family 2 protein
PDDFDHOE_03577 0.0 mfd - - L ko:K03723 ko03420,map03420 ko00000,ko00001,ko01000,ko03400 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
PDDFDHOE_03578 0.0 - - - C - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_03579 4.08e-47 - - - O - - - Belongs to the sulfur carrier protein TusA family
PDDFDHOE_03580 5.77e-68 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_03581 0.0 xly - - M - - - fibronectin type III domain protein
PDDFDHOE_03582 0.0 nagB 3.5.99.6 - G ko:K02564 ko00520,ko01100,map00520,map01100 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score 8.96
PDDFDHOE_03583 1.11e-191 ramA_1 3.5.1.3 - S ko:K13566 ko00250,map00250 ko00000,ko00001,ko01000 hydrolase, carbon-nitrogen family
PDDFDHOE_03584 4.29e-135 - - - I - - - Acyltransferase
PDDFDHOE_03585 2.48e-57 - - - S - - - COG NOG23371 non supervised orthologous group
PDDFDHOE_03586 0.0 - - - - - - - -
PDDFDHOE_03587 0.0 - - - M - - - Glycosyl hydrolases family 43
PDDFDHOE_03588 0.0 - - - G - - - Ricin-type beta-trefoil lectin domain-like
PDDFDHOE_03589 0.0 - - - - - - - -
PDDFDHOE_03591 1.94e-86 - - - S - - - COG NOG31446 non supervised orthologous group
PDDFDHOE_03592 2.82e-119 - - - S - - - L,D-transpeptidase catalytic domain
PDDFDHOE_03593 5.16e-189 rpoD - - K ko:K03086 - ko00000,ko03021 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
PDDFDHOE_03594 0.0 htrA - - O - - - Psort location Periplasmic, score
PDDFDHOE_03595 1.12e-266 ykfB 5.1.1.20, 5.1.1.3 - M ko:K01776,ko:K19802 ko00471,ko01100,map00471,map01100 ko00000,ko00001,ko01000,ko01011 Belongs to the mandelate racemase muconate lactonizing enzyme family
PDDFDHOE_03596 5.49e-237 ykfC - - M - - - NlpC P60 family protein
PDDFDHOE_03597 1.08e-306 yihY - - S ko:K07058 - ko00000 Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_03598 3.01e-114 - - - C - - - Nitroreductase family
PDDFDHOE_03599 1.65e-140 ribE 2.5.1.9 - H ko:K00793 ko00740,ko01100,ko01110,map00740,map01100,map01110 ko00000,ko00001,ko00002,ko01000 COG0307 Riboflavin synthase alpha chain
PDDFDHOE_03600 2.12e-155 phoU - - P ko:K02039 - ko00000 Plays a role in the regulation of phosphate uptake
PDDFDHOE_03601 5.87e-178 pstB 3.6.3.27 - P ko:K02036 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PDDFDHOE_03602 2.31e-199 pstA - - P ko:K02038 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_03603 5.82e-272 pstC - - P ko:K02037 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 probably responsible for the translocation of the substrate across the membrane
PDDFDHOE_03604 9.72e-186 pstS - - P ko:K02040 ko02010,ko02020,ko05152,map02010,map02020,map05152 ko00000,ko00001,ko00002,ko02000 COG0226 ABC-type phosphate transport system, periplasmic component
PDDFDHOE_03605 0.0 glnS 6.1.1.18 - J ko:K01886 ko00970,ko01100,map00970,map01100 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Glutamine--tRNA ligase
PDDFDHOE_03606 5.29e-274 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_03607 1.84e-150 dedA - - S - - - Psort location CytoplasmicMembrane, score
PDDFDHOE_03608 2.46e-216 - - - M - - - COG NOG19097 non supervised orthologous group
PDDFDHOE_03609 1.08e-113 tpx 1.11.1.15 - O ko:K11065 - ko00000,ko01000 Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
PDDFDHOE_03610 1.08e-125 - - - S - - - Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_03611 3.26e-111 - - - S - - - COG NOG14445 non supervised orthologous group
PDDFDHOE_03612 1.19e-158 yggS - - S ko:K06997 - ko00000 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
PDDFDHOE_03613 1.31e-218 preA 1.3.98.1 - F ko:K00226 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of dihydroorotate to orotate
PDDFDHOE_03614 1.07e-314 ybeZ_1 - - T ko:K07175 - ko00000 ATPase related to phosphate starvation-inducible protein PhoH
PDDFDHOE_03615 0.0 folC 6.3.2.12, 6.3.2.17 - H ko:K11754 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko00002,ko01000 Folylpolyglutamate synthase
PDDFDHOE_03616 2.17e-81 ridA 3.5.99.10 - J ko:K09022 - ko00000,ko01000 endoribonuclease L-PSP
PDDFDHOE_03618 7.23e-73 - - - S - - - Psort location CytoplasmicMembrane, score 9.46
PDDFDHOE_03619 0.0 - - - S - - - Domain of unknonw function from B. Theta Gene description (DUF3874)
PDDFDHOE_03620 8.49e-229 - 5.1.3.14 - G ko:K01791 ko00520,ko01100,ko05111,map00520,map01100,map05111 ko00000,ko00001,ko00002,ko01000,ko01005 UDP-N-acetylglucosamine 2-epimerase
PDDFDHOE_03621 1.24e-128 - 2.4.1.180 GT26 M ko:K02852 - ko00000,ko01000,ko01003 Belongs to the glycosyltransferase 26 family
PDDFDHOE_03623 3.74e-206 purU 3.5.1.10 - F ko:K01433 ko00630,ko00670,map00630,map00670 ko00000,ko00001,ko01000 Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4)
PDDFDHOE_03624 6.26e-143 hisH - - E ko:K02501 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
PDDFDHOE_03625 4.67e-173 hisA 5.3.1.16 - E ko:K01814 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
PDDFDHOE_03626 1.33e-178 hisF - - E ko:K02500 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
PDDFDHOE_03627 8.17e-147 hisI 3.5.4.19, 3.6.1.31 - E ko:K11755 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 belongs to the PRA-CH family
PDDFDHOE_03628 2.59e-171 ftsE - - D ko:K09812 ko02010,map02010 ko00000,ko00001,ko00002,ko02000,ko03036 Psort location CytoplasmicMembrane, score 7.88
PDDFDHOE_03629 0.0 lysC 2.7.2.4 - E ko:K00928 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the aspartokinase family
PDDFDHOE_03630 1.4e-282 lysA 4.1.1.20 - E ko:K01586 ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
PDDFDHOE_03631 1.38e-112 ftnA 1.16.3.2 - P ko:K02217 - ko00000,ko01000 Iron-storage protein
PDDFDHOE_03632 2.07e-80 - - - S - - - Psort location CytoplasmicMembrane, score
PDDFDHOE_03633 1.71e-283 kbl 2.3.1.29 - H ko:K00639 ko00260,map00260 ko00000,ko00001,ko01000,ko01007 Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA
PDDFDHOE_03634 1.34e-232 ltd - - M - - - NAD dependent epimerase dehydratase family
PDDFDHOE_03635 4.74e-208 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_03636 1.12e-242 murB 1.3.1.98 - M ko:K00075 ko00520,ko00550,ko01100,map00520,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Cell wall formation
PDDFDHOE_03637 7.21e-188 lipB 3.1.4.55 - S ko:K06167 ko00440,map00440 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score 8.96
PDDFDHOE_03638 0.0 - - - S - - - COG NOG25407 non supervised orthologous group
PDDFDHOE_03639 4.55e-83 - - - L - - - COG NOG19098 non supervised orthologous group
PDDFDHOE_03640 9.85e-261 dnaN 2.7.7.7 - L ko:K02338 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
PDDFDHOE_03641 3.42e-187 dnaQ 2.7.7.7 - L ko:K02342 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 COG0847 DNA polymerase III epsilon subunit and related 3'-5'
PDDFDHOE_03642 1.86e-285 coaBC 4.1.1.36, 6.3.2.5 - H ko:K13038 ko00770,ko01100,map00770,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
PDDFDHOE_03643 0.0 recN - - L ko:K03631 - ko00000,ko03400 May be involved in recombinational repair of damaged DNA
PDDFDHOE_03644 1.82e-174 trmH 2.1.1.185 - J ko:K03218,ko:K03437 - ko00000,ko01000,ko03009,ko03016 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PDDFDHOE_03645 0.0 - - - O - - - COG COG0457 FOG TPR repeat
PDDFDHOE_03646 1.13e-133 - - - K - - - KOW (Kyprides, Ouzounis, Woese) motif.
PDDFDHOE_03647 9.61e-84 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_03648 0.0 kpsD - - M - - - COG1596 Periplasmic protein involved in polysaccharide export
PDDFDHOE_03649 2.92e-168 - - - M - - - Chain length determinant protein
PDDFDHOE_03650 1.44e-188 tagO - - M - - - Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_03651 1.48e-257 - 1.1.1.336 - M ko:K02472 ko00520,ko05111,map00520,map05111 ko00000,ko00001,ko01000 Belongs to the UDP-glucose GDP-mannose dehydrogenase family
PDDFDHOE_03652 7.59e-153 - - - S - - - Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_03654 7.52e-165 ung 3.2.2.27 - L ko:K03648 ko03410,ko05340,map03410,map05340 ko00000,ko00001,ko01000,ko03400 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
PDDFDHOE_03655 6.35e-256 asnA 6.3.1.1 - E ko:K01914 ko00250,ko00460,ko01100,ko01110,ko01230,map00250,map00460,map01100,map01110,map01230 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score 10.00
PDDFDHOE_03657 0.0 fkp - - S - - - GHMP kinase, N-terminal domain protein
PDDFDHOE_03658 3.16e-159 yfbT - - S - - - HAD hydrolase, family IA, variant 3
PDDFDHOE_03659 1.38e-184 - - - - - - - -
PDDFDHOE_03660 9.87e-112 - - - S - - - Domain of unknown function (DUF5035)
PDDFDHOE_03661 0.0 pgi 5.3.1.9 - G ko:K01810 ko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the GPI family
PDDFDHOE_03662 1.38e-250 gpsA 1.1.1.94 - I ko:K00057 ko00564,ko01110,map00564,map01110 ko00000,ko00001,ko01000 Glycerol-3-phosphate dehydrogenase
PDDFDHOE_03663 0.0 lysS 6.1.1.6 - J ko:K04567 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the class-II aminoacyl-tRNA synthetase family
PDDFDHOE_03664 2e-311 - - - V - - - Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_03666 8.03e-73 - - - - - - - -
PDDFDHOE_03667 6.32e-42 - - - S - - - Protein of unknown function DUF86
PDDFDHOE_03668 4.5e-36 - - - S ko:K07075 - ko00000 Nucleotidyltransferase domain
PDDFDHOE_03669 2.05e-181 - - - - - - - -
PDDFDHOE_03670 0.0 - - - G - - - COG COG0383 Alpha-mannosidase
PDDFDHOE_03671 1.71e-269 - - - G - - - Glycosyl hydrolases family 43
PDDFDHOE_03672 0.0 - - - G - - - Glycosyl hydrolase family 92
PDDFDHOE_03673 6.69e-304 - - - S - - - Domain of unknown function
PDDFDHOE_03674 7.18e-303 - - - S - - - Domain of unknown function (DUF5126)
PDDFDHOE_03675 0.0 - - - P ko:K21572 - ko00000,ko02000 non supervised orthologous group
PDDFDHOE_03676 0.0 - - - H - - - TonB-linked outer membrane protein, SusC RagA family
PDDFDHOE_03679 0.0 - 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 2 family
PDDFDHOE_03680 1.12e-269 ganB 3.2.1.89 - G ko:K01224 - ko00000,ko01000 arabinogalactan endo-1,4-beta-galactosidase
PDDFDHOE_03681 0.0 - - - S ko:K21571 - ko00000 Domain of unknown function (DUF5114)
PDDFDHOE_03682 0.0 - - - M ko:K21572 - ko00000,ko02000 SusD family
PDDFDHOE_03683 0.0 - - - P ko:K21573 - ko00000,ko02000 TonB-linked outer membrane protein, SusC RagA family
PDDFDHOE_03685 0.0 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
PDDFDHOE_03686 9.33e-125 - - - S - - - COG NOG28695 non supervised orthologous group
PDDFDHOE_03687 1.17e-284 - 4.2.2.7 PL13 M ko:K19050 - ko00000,ko01000 Heparin lyase
PDDFDHOE_03688 1.66e-96 - - - S - - - COG NOG31508 non supervised orthologous group
PDDFDHOE_03689 5.15e-125 - - - S - - - COG NOG31242 non supervised orthologous group
PDDFDHOE_03690 1.32e-295 sdaA 4.3.1.17 - E ko:K01752 ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230 ko00000,ko00001,ko01000 COG1760 L-serine deaminase
PDDFDHOE_03691 6.33e-254 corA - - P ko:K03284 - ko00000,ko02000 Mediates influx of magnesium ions
PDDFDHOE_03692 0.0 mutS2 - - L ko:K07456 ko03430,map03430 ko00000,ko00001,ko03400 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
PDDFDHOE_03694 8.02e-45 - - - S - - - Domain of unknown function (DUF4361)
PDDFDHOE_03695 3.28e-221 - - - P ko:K21572 - ko00000,ko02000 SusD family
PDDFDHOE_03696 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PDDFDHOE_03697 1.32e-180 - - - S - - - NHL repeat
PDDFDHOE_03698 1.73e-138 - - - K - - - KOW (Kyprides, Ouzounis, Woese) motif.
PDDFDHOE_03699 6.64e-233 - - - L - - - COG NOG21178 non supervised orthologous group
PDDFDHOE_03700 6.53e-89 - - - S - - - Domain of unknown function, B. Theta Gene description (DUF4119)
PDDFDHOE_03701 6.04e-82 - - - S - - - WYL_2, Sm-like SH3 beta-barrel fold
PDDFDHOE_03702 2.3e-184 - - - L - - - COG NOG19076 non supervised orthologous group
PDDFDHOE_03703 0.0 - - - M - - - Protein of unknown function (DUF3078)
PDDFDHOE_03704 0.0 pyrG 6.3.4.2 - F ko:K01937 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
PDDFDHOE_03705 0.0 yidC - - U ko:K03217 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044,ko03029 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins
PDDFDHOE_03706 6.19e-315 - - - V - - - MATE efflux family protein
PDDFDHOE_03707 0.0 pop - - EU - - - Peptidase, S9A B C family, catalytic domain protein
PDDFDHOE_03708 1.76e-160 - - - - - - - -
PDDFDHOE_03709 8.5e-121 - - - S - - - COG COG1853 Conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
PDDFDHOE_03710 2.68e-255 - - - S - - - of the beta-lactamase fold
PDDFDHOE_03711 8.05e-239 - - - KT ko:K03973 - ko00000,ko02048,ko03000 Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_03712 6.67e-86 - - - K ko:K10947 - ko00000,ko03000 transcriptional regulator PadR family
PDDFDHOE_03713 3.23e-123 paiA - - K - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_03714 0.0 - - - P ko:K03305 - ko00000 amino acid peptide transporter
PDDFDHOE_03715 4.82e-113 ybaK - - H ko:K03976 - ko00000,ko01000,ko03016 Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
PDDFDHOE_03716 0.0 uvrA2 - - L ko:K03701 ko03420,map03420 ko00000,ko00001,ko03400 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
PDDFDHOE_03717 0.0 lysM - - M - - - LysM domain
PDDFDHOE_03718 1.39e-170 - - - S - - - Outer membrane protein beta-barrel domain
PDDFDHOE_03719 2.75e-95 - - - S - - - Psort location CytoplasmicMembrane, score
PDDFDHOE_03720 4.8e-72 rpoZ - - S - - - COG NOG14434 non supervised orthologous group
PDDFDHOE_03721 1.97e-188 yfiO - - S ko:K05807 - ko00000,ko02000 outer membrane assembly lipoprotein YfiO
PDDFDHOE_03722 1.02e-94 - - - S - - - ACT domain protein
PDDFDHOE_03723 0.0 - 6.2.1.30 - H ko:K01912 ko00360,ko01120,ko05111,map00360,map01120,map05111 ko00000,ko00001,ko01000 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
PDDFDHOE_03724 0.0 uvrB - - L ko:K03702 ko03420,map03420 ko00000,ko00001,ko03400 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
PDDFDHOE_03725 7.64e-222 - - - L - - - COG NOG21178 non supervised orthologous group
PDDFDHOE_03726 1.68e-135 - - - L - - - COG COG3344 Retron-type reverse transcriptase
PDDFDHOE_03727 2.43e-181 - - - PT - - - FecR protein
PDDFDHOE_03728 4.91e-131 - - - K ko:K03088 - ko00000,ko03021 Sigma-70, region 4
PDDFDHOE_03729 0.0 prfC - - J ko:K02837 - ko00000,ko03012 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
PDDFDHOE_03730 8.53e-211 rfbD 1.1.1.133 - M ko:K00067 ko00521,ko00523,ko01130,map00521,map00523,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
PDDFDHOE_03731 2.3e-124 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_03732 2.05e-147 - - - E - - - Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_03733 0.0 purL 6.3.5.3 - F ko:K01952 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate
PDDFDHOE_03734 0.0 - - - T - - - Psort location CytoplasmicMembrane, score
PDDFDHOE_03735 2.67e-125 chrA - - P ko:K07240 - ko00000,ko02000 Psort location CytoplasmicMembrane, score
PDDFDHOE_03736 1.68e-122 - - - P ko:K07240 - ko00000,ko02000 Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_03737 0.0 yngK - - S - - - lipoprotein YddW precursor
PDDFDHOE_03738 0.0 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
PDDFDHOE_03739 0.0 uvrA1 - - L ko:K03701 ko03420,map03420 ko00000,ko00001,ko03400 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
PDDFDHOE_03740 6.82e-114 - - - MU - - - COG NOG29365 non supervised orthologous group
PDDFDHOE_03741 2.87e-30 - - - S - - - COG NOG34202 non supervised orthologous group
PDDFDHOE_03742 0.0 cstA - - T ko:K06200 - ko00000 Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_03743 0.0 - - - E - - - GDSL-like Lipase/Acylhydrolase
PDDFDHOE_03744 0.0 yngK - - S - - - lipoprotein YddW precursor K01189
PDDFDHOE_03745 1.7e-155 - - - PT - - - COG NOG28383 non supervised orthologous group
PDDFDHOE_03746 0.0 - - - H - - - TonB-linked outer membrane protein, SusC RagA family
PDDFDHOE_03747 0.0 - - - P ko:K21572 - ko00000,ko02000 SusD family
PDDFDHOE_03748 2.48e-312 - - - S - - - Domain of unknown function (DUF1735)
PDDFDHOE_03749 0.0 - - - E - - - COG NOG04153 non supervised orthologous group
PDDFDHOE_03750 0.0 - - - S - - - Oxidoreductase NAD-binding domain protein
PDDFDHOE_03751 3.88e-211 - - - S - - - Psort location CytoplasmicMembrane, score
PDDFDHOE_03752 0.0 - 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 COG3250 Beta-galactosidase beta-glucuronidase
PDDFDHOE_03753 9.97e-269 mdsC - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_03754 1.24e-152 - - - S - - - COG NOG19149 non supervised orthologous group
PDDFDHOE_03755 2.25e-210 - - - EG ko:K08978 - ko00000,ko02000 Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_03756 5.72e-198 truA 5.4.99.12 - J ko:K06173 - ko00000,ko01000,ko03016 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
PDDFDHOE_03757 0.0 - - - T - - - cheY-homologous receiver domain
PDDFDHOE_03758 3.05e-146 - - - S - - - Domain of unknown function (DUF5033)
PDDFDHOE_03759 3.51e-141 - - - M - - - Protein of unknown function (DUF3575)
PDDFDHOE_03760 0.0 - - - M - - - COG NOG23378 non supervised orthologous group
PDDFDHOE_03761 7.13e-36 - - - K - - - Helix-turn-helix domain
PDDFDHOE_03762 9.61e-23 - - - S - - - Phage derived protein Gp49-like (DUF891)
PDDFDHOE_03763 4.34e-151 - - - L - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_03764 2.11e-312 - - - S - - - P-loop ATPase and inactivated derivatives
PDDFDHOE_03765 1.22e-310 - - - S - - - Major fimbrial subunit protein type IV, Fimbrillin, C-terminal
PDDFDHOE_03766 1.68e-254 - - - S - - - COG NOG32009 non supervised orthologous group
PDDFDHOE_03767 6.83e-252 - - - - - - - -
PDDFDHOE_03768 0.0 - - - S - - - Domain of unknown function (DUF4906)
PDDFDHOE_03770 4.81e-14 - - - K - - - Helix-turn-helix domain
PDDFDHOE_03771 6.6e-255 - - - DK - - - Fic/DOC family
PDDFDHOE_03772 1.12e-105 - - - S - - - Psort location CytoplasmicMembrane, score 9.46
PDDFDHOE_03773 7.76e-238 yqiK - - S ko:K07192 ko04910,map04910 ko00000,ko00001,ko03036,ko04131,ko04147 SPFH Band 7 PHB domain protein
PDDFDHOE_03774 4.33e-162 - - - S - - - COG NOG26960 non supervised orthologous group
PDDFDHOE_03775 2.12e-230 phoH - - T ko:K06217 - ko00000 phosphate starvation-inducible protein
PDDFDHOE_03776 7.73e-230 purC 6.3.2.6 - F ko:K01923 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Belongs to the SAICAR synthetase family
PDDFDHOE_03777 4.16e-179 menG 2.1.1.163, 2.1.1.201 - H ko:K03183 ko00130,ko01100,ko01110,map00130,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
PDDFDHOE_03778 1.15e-182 aroE 1.1.1.25 - C ko:K00014 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 COG0169 Shikimate 5-dehydrogenase
PDDFDHOE_03779 2.4e-232 - - - S ko:K06889 - ko00000 of the alpha beta superfamily
PDDFDHOE_03780 1.19e-201 - - - S ko:K06872 - ko00000 COG1512 Beta-propeller domains of methanol dehydrogenase type
PDDFDHOE_03781 1.53e-128 lemA - - S ko:K03744 - ko00000 LemA family
PDDFDHOE_03783 3.59e-286 purM 6.3.3.1 - F ko:K01933 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score
PDDFDHOE_03784 4.35e-262 prfA - - J ko:K02835 - ko00000,ko03012 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
PDDFDHOE_03785 1.99e-196 pyrF 4.1.1.23 - F ko:K01591 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the OMP decarboxylase family. Type 2 subfamily
PDDFDHOE_03786 9.77e-297 - - - S ko:K06885 - ko00000 Psort location Cytoplasmic, score 8.96
PDDFDHOE_03787 9.53e-164 lpxD 2.3.1.191 - M ko:K02536 ko00540,ko01100,map00540,map01100 ko00000,ko00001,ko00002,ko01000,ko01005 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
PDDFDHOE_03788 0.0 fabZ 3.5.1.108, 4.2.1.59 - IM ko:K16363 ko00061,ko00540,ko01100,ko01212,map00061,map00540,map01100,map01212 ko00000,ko00001,ko00002,ko01000,ko01004,ko01005 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis
PDDFDHOE_03789 8.73e-161 lpxA 2.3.1.129 - M ko:K00677 ko00540,ko01100,ko01503,map00540,map01100,map01503 ko00000,ko00001,ko00002,ko01000,ko01005 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
PDDFDHOE_03790 1.95e-122 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_03791 8.72e-211 miaA 2.5.1.75 - F ko:K00791 ko00908,ko01100,ko01110,map00908,map01100,map01110 ko00000,ko00001,ko01000,ko01006,ko03016 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
PDDFDHOE_03792 9.33e-76 - - - - - - - -
PDDFDHOE_03793 0.0 - - - KT - - - COG NOG25147 non supervised orthologous group
PDDFDHOE_03794 4.32e-146 - - - - ko:K03646 - ko00000,ko02000 -
PDDFDHOE_03795 8.58e-82 - - - K - - - Transcriptional regulator, BlaI MecI CopY family
PDDFDHOE_03796 2.32e-67 - - - - - - - -
PDDFDHOE_03797 8.97e-38 - - - S - - - COG NOG17292 non supervised orthologous group
PDDFDHOE_03798 1.64e-211 - - - O - - - SPFH Band 7 PHB domain protein
PDDFDHOE_03799 0.0 dpp 3.4.14.5 - EU ko:K01278 ko04974,map04974 ko00000,ko00001,ko01000,ko01002,ko04090,ko04147 Peptidase, S9A B C family, catalytic domain protein
PDDFDHOE_03800 2.55e-212 lipA 2.8.1.8 - H ko:K03644 ko00785,ko01100,map00785,map01100 ko00000,ko00001,ko01000 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
PDDFDHOE_03801 2.97e-266 - - - I - - - Psort location CytoplasmicMembrane, score
PDDFDHOE_03802 1.98e-167 rsmI_1 2.1.1.198 - H ko:K07056 - ko00000,ko01000,ko03009 Psort location Cytoplasmic, score 8.96
PDDFDHOE_03803 8.23e-247 gldB - - O - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_03804 1.58e-203 fabI 1.3.1.10, 1.3.1.9 - I ko:K00208 ko00061,ko00333,ko00780,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01100,map01130,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 Enoyl- acyl-carrier-protein reductase NADH
PDDFDHOE_03805 0.0 - - - G - - - Belongs to the glycosyl hydrolase 28 family
PDDFDHOE_03806 2.86e-310 - - - S - - - unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins
PDDFDHOE_03807 0.0 xynB_10 - - G - - - Belongs to the glycosyl hydrolase 43 family
PDDFDHOE_03808 5.49e-156 - 3.1.3.18 - S ko:K01091 ko00630,ko01100,ko01110,ko01130,map00630,map01100,map01110,map01130 ko00000,ko00001,ko01000 HAD hydrolase, family IA, variant
PDDFDHOE_03809 0.0 - - - S - - - Domain of unknown function
PDDFDHOE_03810 0.0 - - - T - - - Y_Y_Y domain
PDDFDHOE_03811 0.0 - 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 2 family
PDDFDHOE_03812 1.52e-201 - - - E - - - Carbohydrate esterase, sialic acid-specific acetylesterase
PDDFDHOE_03813 0.0 - - - G - - - CBM9 module, glycoside hydrolase family 8 protein and carbohydrate esterase family 4 protein K01238
PDDFDHOE_03814 0.0 - - - T - - - Response regulator receiver domain
PDDFDHOE_03815 4.22e-74 rhaU 5.1.3.32 - G ko:K03534 - ko00000,ko01000 Involved in the anomeric conversion of L-rhamnose
PDDFDHOE_03816 0.0 yteR_9 - - E - - - Glycosyl Hydrolase Family 88
PDDFDHOE_03817 0.0 - - - G - - - candidate rhamnogalacturonan lyase, polysaccharide lyase family 11 protein K01238
PDDFDHOE_03818 3.43e-284 yteR_10 - - G - - - unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins
PDDFDHOE_03819 0.0 - - - E - - - GDSL-like protein
PDDFDHOE_03820 0.0 - - - - - - - -
PDDFDHOE_03822 8.43e-108 - - - - - - - -
PDDFDHOE_03823 6.63e-284 - - - S - - - Domain of unknown function
PDDFDHOE_03824 5.83e-261 - - - S ko:K21572 - ko00000,ko02000 PFAM SusD family
PDDFDHOE_03825 0.0 - - - P - - - TonB dependent receptor
PDDFDHOE_03826 5.95e-228 - - - M - - - COG2335, Secreted and surface protein containing fasciclin-like repeats
PDDFDHOE_03827 3.06e-227 - - - M ko:K19519 - ko00000,ko04516 Domain of unknown function (DUF5108)
PDDFDHOE_03828 4.35e-247 - - - S ko:K21572 - ko00000,ko02000 Starch-binding associating with outer membrane
PDDFDHOE_03829 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PDDFDHOE_03830 1.6e-301 - - - M - - - Domain of unknown function
PDDFDHOE_03832 1.66e-226 - - - L - - - Belongs to the 'phage' integrase family
PDDFDHOE_03833 2.06e-182 - - - L - - - COG NOG21178 non supervised orthologous group
PDDFDHOE_03834 4.4e-27 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_03835 1.84e-237 manA 5.3.1.8 - G ko:K01809 ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score 8.96
PDDFDHOE_03836 9.3e-275 galM 5.1.3.3 - G ko:K01785 ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130 ko00000,ko00001,ko00002,ko01000 Converts alpha-aldose to the beta-anomer
PDDFDHOE_03837 3.49e-306 gluP - - G ko:K02429 - ko00000,ko02000 Transporter, major facilitator family protein
PDDFDHOE_03838 6.19e-285 galK 2.7.1.6 - H ko:K00849 ko00052,ko00520,ko01100,map00052,map00520,map01100 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the GHMP kinase family. GalK subfamily
PDDFDHOE_03839 9.84e-246 - - - G - - - Belongs to the glycosyl hydrolase 43 family
PDDFDHOE_03840 0.0 - 3.2.1.55 GH51 G ko:K01209 ko00520,map00520 ko00000,ko00001,ko01000 Carbohydrate binding domain protein
PDDFDHOE_03841 0.0 - 3.2.1.99 GH43 G ko:K06113 - ko00000,ko01000 Belongs to the glycosyl hydrolase 43 family
PDDFDHOE_03842 0.0 - - - T - - - adenylate cyclase carring two-component hybrid sensor and regulator domains
PDDFDHOE_03843 0.0 - - - - - - - -
PDDFDHOE_03844 0.0 - - - H - - - TonB-linked outer membrane protein, SusC RagA family
PDDFDHOE_03845 0.0 - - - F ko:K21572 - ko00000,ko02000 Pfam:SusD
PDDFDHOE_03846 0.0 - - - P - - - TonB-dependent Receptor Plug Domain
PDDFDHOE_03847 0.0 - - - F ko:K21572 - ko00000,ko02000 Pfam:SusD
PDDFDHOE_03848 0.0 - 3.2.1.99 GH43 G ko:K06113 - ko00000,ko01000 Glycosyl hydrolases family 43
PDDFDHOE_03849 1.23e-214 - - - L - - - Phage integrase SAM-like domain
PDDFDHOE_03850 1.61e-254 - - - L - - - Belongs to the 'phage' integrase family
PDDFDHOE_03851 1.48e-51 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_03852 2.59e-38 - - - K - - - tryptophan synthase beta chain K06001
PDDFDHOE_03853 1.77e-63 - - - S - - - Helix-turn-helix domain
PDDFDHOE_03854 1.64e-38 - - - - - - - -
PDDFDHOE_03855 4.35e-188 - - - T ko:K07713 ko02020,map02020 ko00000,ko00001,ko00002,ko02022 Sigma-54 interaction domain protein
PDDFDHOE_03856 2.7e-219 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
PDDFDHOE_03857 7.87e-172 - - - H - - - ThiF family
PDDFDHOE_03858 7.76e-144 - - - S - - - PRTRC system protein B
PDDFDHOE_03859 1.17e-178 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_03860 8.37e-42 - - - S - - - Prokaryotic Ubiquitin
PDDFDHOE_03861 4.08e-93 - - - S - - - PRTRC system protein E
PDDFDHOE_03863 0.0 - 5.99.1.2 - L ko:K03169 - ko00000,ko01000,ko03032 COG0550 Topoisomerase IA
PDDFDHOE_03864 2.86e-37 - - - S - - - Protein of unknown function (DUF4099)
PDDFDHOE_03865 0.0 - - - S - - - COG NOG09947 non supervised orthologous group
PDDFDHOE_03870 1.96e-16 - - - M - - - RHS repeat-associated core domain protein
PDDFDHOE_03871 5.46e-49 - - - S - - - Psort location CytoplasmicMembrane, score
PDDFDHOE_03877 1.87e-12 - - - S - - - Domain of unknown function (DUF4120)
PDDFDHOE_03878 6.02e-77 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_03879 1.21e-30 - - - - - - - -
PDDFDHOE_03880 4.48e-43 - - - - - - - -
PDDFDHOE_03881 2.88e-235 - - - U - - - Psort location CytoplasmicMembrane, score
PDDFDHOE_03882 0.0 cydA 1.10.3.14 - C ko:K00425 ko00190,ko01100,ko02020,map00190,map01100,map02020 ko00000,ko00001,ko00002,ko01000 COG1271 Cytochrome bd-type quinol oxidase, subunit 1
PDDFDHOE_03883 6.83e-50 - - - S - - - COG NOG17489 non supervised orthologous group
PDDFDHOE_03884 3.42e-313 - - - MU ko:K12340 ko01501,ko01503,ko02020,ko03070,ko04626,ko05133,map01501,map01503,map02020,map03070,map04626,map05133 ko00000,ko00001,ko00002,ko01504,ko02000,ko02044 type I secretion outer membrane protein, TolC family
PDDFDHOE_03885 1.12e-270 - - - M ko:K02005 - ko00000 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PDDFDHOE_03886 5.61e-169 - - - V ko:K02003 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
PDDFDHOE_03887 6.4e-280 - - - V ko:K02004 - ko00000,ko00002,ko02000 Efflux ABC transporter, permease protein
PDDFDHOE_03888 2.06e-258 cheA - - T - - - two-component sensor histidine kinase
PDDFDHOE_03889 5.22e-162 - - - K - - - COG3279 Response regulator of the LytR AlgR family
PDDFDHOE_03890 3.71e-171 yoqW - - E - - - SOS response associated peptidase (SRAP)
PDDFDHOE_03891 8.07e-233 yfeX - - P ko:K07223 - ko00000 Dyp-type peroxidase family
PDDFDHOE_03892 6.76e-168 pgl 3.1.1.31 - G ko:K01057 ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 COG0363 6-phosphogluconolactonase Glucosamine-6-phosphate isomerase deaminase
PDDFDHOE_03893 0.0 zwf 1.1.1.363, 1.1.1.49 - G ko:K00036 ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,ko05230,map00030,map00480,map01100,map01110,map01120,map01130,map01200,map05230 ko00000,ko00001,ko00002,ko01000,ko04147 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
PDDFDHOE_03894 0.0 gnd 1.1.1.343, 1.1.1.44 - H ko:K00033 ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
PDDFDHOE_03895 5.84e-256 sstT - - U - - - Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
PDDFDHOE_03896 2.32e-259 gmd 4.2.1.47 - M ko:K01711 ko00051,ko00520,ko01100,map00051,map00520,map01100 ko00000,ko00001,ko01000 Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
PDDFDHOE_03897 6.72e-268 fcl 1.1.1.271 - GM ko:K02377 ko00051,ko00520,ko01100,map00051,map00520,map01100 ko00000,ko00001,ko01000 Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction
PDDFDHOE_03898 0.0 - 6.2.1.3 - I ko:K01897 ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920 ko00000,ko00001,ko00002,ko01000,ko01004,ko04147 Psort location CytoplasmicMembrane, score
PDDFDHOE_03899 3.03e-154 - - - S - - - Peptidase C14 caspase catalytic subunit p20
PDDFDHOE_03900 0.0 fbp 3.1.3.11 - G ko:K04041 ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 D-fructose-1,6-bisphosphate 1-phosphohydrolase class 3
PDDFDHOE_03901 0.0 - - - P ko:K07085 - ko00000 Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_03902 7.04e-107 - - - - - - - -
PDDFDHOE_03903 0.0 - - - G - - - Belongs to the glycosyl hydrolase 31 family
PDDFDHOE_03904 1.84e-261 - - - G - - - Fibronectin type III
PDDFDHOE_03905 4.8e-215 - - - G - - - Glycosyl hydrolases family 43
PDDFDHOE_03906 0.0 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
PDDFDHOE_03907 9.39e-53 - - - P - - - TonB-dependent Receptor Plug Domain
PDDFDHOE_03908 5.35e-12 - - - NQ - - - Bacterial Ig-like domain 2
PDDFDHOE_03909 2.07e-84 - - - F ko:K21572 - ko00000,ko02000 RagB SusD domain protein
PDDFDHOE_03910 1.86e-280 - - - H - - - TonB-dependent receptor plug
PDDFDHOE_03911 7.22e-107 - - - F ko:K21572 - ko00000,ko02000 RagB SusD domain protein
PDDFDHOE_03912 5.98e-176 - - - P - - - TonB-dependent receptor plug
PDDFDHOE_03913 4.9e-54 - - - K ko:K03088 - ko00000,ko03021 Belongs to the sigma-70 factor family. ECF subfamily
PDDFDHOE_03914 3.41e-262 - 3.2.1.20 GH31 G ko:K01187 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 Glycosyl-hydrolase 97 C-terminal, oligomerisation
PDDFDHOE_03915 8.63e-284 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_03916 2.57e-288 - - - S ko:K07133 - ko00000 ATPase (AAA superfamily)
PDDFDHOE_03917 0.0 nifJ 1.2.7.1 - C ko:K03737 ko00010,ko00020,ko00620,ko00650,ko00720,ko01100,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00650,map00720,map01100,map01120,map01130,map01200 br01601,ko00000,ko00001,ko00002,ko01000 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
PDDFDHOE_03918 1e-35 - - - - - - - -
PDDFDHOE_03919 4.71e-201 opuAC - - E ko:K02002 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter, substrate-binding protein, QAT family
PDDFDHOE_03920 7.14e-191 opuAB - - P ko:K02001 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 glycine betaine transport system, permease
PDDFDHOE_03921 5.27e-280 proV 3.6.3.32 - S ko:K02000 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 IMP dehydrogenase activity
PDDFDHOE_03922 1.22e-282 - - - S - - - Pfam:DUF2029
PDDFDHOE_03923 3.96e-75 ogt 2.1.1.63 - L ko:K00567,ko:K07443 - ko00000,ko01000,ko03400 6-O-methylguanine DNA methyltransferase, DNA binding domain
PDDFDHOE_03924 0.0 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
PDDFDHOE_03925 5.09e-225 - - - S - - - protein conserved in bacteria
PDDFDHOE_03926 3.1e-215 ydjH_1 2.7.1.4 - G ko:K00847 ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100 ko00000,ko00001,ko01000 pfkB family
PDDFDHOE_03927 1.01e-272 - - - G - - - Transporter, major facilitator family protein
PDDFDHOE_03928 0.0 sacC 3.2.1.80 - G ko:K03332 ko00051,map00051 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 32 family
PDDFDHOE_03929 0.0 - 3.2.1.26 GH32 G ko:K01193 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 hydrolase family 32
PDDFDHOE_03930 0.0 - - - S - - - Domain of unknown function (DUF4960)
PDDFDHOE_03931 0.0 - - - S ko:K21572 - ko00000,ko02000 Pfam:SusD
PDDFDHOE_03932 8.53e-208 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PDDFDHOE_03933 1.37e-313 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_03934 4.82e-88 - - - L - - - COG NOG29624 non supervised orthologous group
PDDFDHOE_03935 1.99e-71 - - - - - - - -
PDDFDHOE_03936 5.68e-128 - - - V - - - N-acetylmuramoyl-L-alanine amidase
PDDFDHOE_03937 0.0 - - - S - - - COG NOG22466 non supervised orthologous group
PDDFDHOE_03940 4.79e-109 - - - L - - - Belongs to the 'phage' integrase family
PDDFDHOE_03941 1.29e-48 - - - - - - - -
PDDFDHOE_03942 7.6e-148 - - - L - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_03943 0.0 - - - - - - - -
PDDFDHOE_03946 4.43e-131 - - - - - - - -
PDDFDHOE_03947 2.41e-95 - - - D - - - nuclear chromosome segregation
PDDFDHOE_03949 6.56e-39 - - - S - - - Protein of unknown function (DUF2442)
PDDFDHOE_03950 3.53e-64 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_03951 6e-27 - - - - - - - -
PDDFDHOE_03952 0.0 leuA 2.3.3.13 - E ko:K01649 ko00290,ko00620,ko01100,ko01110,ko01210,ko01230,map00290,map00620,map01100,map01110,map01210,map01230 br01601,ko00000,ko00001,ko00002,ko01000 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
PDDFDHOE_03953 0.0 leuC 4.2.1.33, 4.2.1.35 - H ko:K01703 ko00290,ko00660,ko00966,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map00966,map01100,map01110,map01210,map01230 br01601,ko00000,ko00001,ko00002,ko01000 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
PDDFDHOE_03954 4.22e-143 leuD 4.2.1.33, 4.2.1.35 - E ko:K01704 ko00290,ko00660,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map01100,map01110,map01210,map01230 br01601,ko00000,ko00001,ko00002,ko01000 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
PDDFDHOE_03955 0.0 leuA_1 2.3.1.182 - E ko:K09011 ko00290,ko00660,ko01100,ko01210,ko01230,map00290,map00660,map01100,map01210,map01230 br01601,ko00000,ko00001,ko00002,ko01000 Belongs to the alpha-IPM synthase homocitrate synthase family
PDDFDHOE_03956 1.83e-259 leuB 1.1.1.85 - CE ko:K00052 ko00290,ko00660,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map01100,map01110,map01210,map01230 br01601,ko00000,ko00001,ko00002,ko01000 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate
PDDFDHOE_03957 0.0 - - - S - - - Domain of unknown function (DUF4784)
PDDFDHOE_03958 3.74e-155 - - - Q - - - ubiE/COQ5 methyltransferase family
PDDFDHOE_03959 5.05e-161 ybjG 3.6.1.27 - I ko:K19302 ko00550,map00550 ko00000,ko00001,ko01000,ko01011 Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_03960 0.0 ltaS2 - - M - - - Psort location CytoplasmicMembrane, score
PDDFDHOE_03961 6.24e-219 cysK 2.5.1.47 - E ko:K01738,ko:K12339 ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the cysteine synthase cystathionine beta- synthase family
PDDFDHOE_03962 3.32e-60 - - - S - - - COG COG0457 FOG TPR repeat
PDDFDHOE_03963 1.44e-256 - - - M - - - Acyltransferase family
PDDFDHOE_03964 0.0 recQ3 3.6.4.12 - L ko:K03654 ko03018,map03018 ko00000,ko00001,ko01000,ko03400 ATP-dependent DNA helicase
PDDFDHOE_03965 3.16e-102 - - - K - - - transcriptional regulator (AraC
PDDFDHOE_03966 0.0 - 3.4.14.4 - S ko:K01277 - ko00000,ko01000,ko01002 Peptidase family M49
PDDFDHOE_03967 4.86e-157 - - - L - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_03968 7.33e-112 fur - - P ko:K03711 - ko00000,ko03000 Belongs to the Fur family
PDDFDHOE_03969 3.64e-315 purA 6.3.4.4 - F ko:K01939 ko00230,ko00250,ko01100,map00230,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
PDDFDHOE_03970 0.0 - 3.2.1.51 GH29 G ko:K01206 ko00511,map00511 ko00000,ko00001,ko01000,ko04147 Alpha-L-fucosidase
PDDFDHOE_03971 5.87e-156 - - - S ko:K06973 - ko00000 neutral zinc metallopeptidase
PDDFDHOE_03972 0.0 hisS 6.1.1.21 - J ko:K01892 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Psort location Cytoplasmic, score
PDDFDHOE_03973 8.23e-34 - - - S - - - PcfK-like protein
PDDFDHOE_03975 7.3e-26 - - - - - - - -
PDDFDHOE_03976 1.93e-42 - - - K - - - tryptophan synthase beta chain K06001
PDDFDHOE_03977 4.74e-41 - - - S - - - Helix-turn-helix domain
PDDFDHOE_03978 2.62e-49 - - - S - - - COG3943, virulence protein
PDDFDHOE_03979 1.04e-249 - - - L - - - Arm DNA-binding domain
PDDFDHOE_03980 8.68e-230 - - - L - - - Phage integrase SAM-like domain
PDDFDHOE_03981 3.44e-62 - - - S - - - Domain of unknown function (DUF4468) with TBP-like fold
PDDFDHOE_03984 1.3e-14 - - - - - - - -
PDDFDHOE_03985 8.35e-150 - - - D - - - Psort location OuterMembrane, score
PDDFDHOE_03986 4.11e-64 - - - - - - - -
PDDFDHOE_03987 1.42e-62 - - - - - - - -
PDDFDHOE_03988 4.29e-221 - - - S - - - Phage minor structural protein
PDDFDHOE_03989 1.73e-241 - - - M - - - chlorophyll binding
PDDFDHOE_03990 3.05e-66 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_03991 2.3e-109 - 3.5.1.28 - M ko:K01448 ko01503,map01503 ko00000,ko00001,ko00002,ko01000,ko01011,ko03036 COG NOG32858 non supervised orthologous group
PDDFDHOE_03992 2.24e-55 - - - - - - - -
PDDFDHOE_03993 0.0 - - - S - - - regulation of response to stimulus
PDDFDHOE_03994 2.23e-65 - - - S - - - COG COG0724 RNA-binding proteins (RRM domain)
PDDFDHOE_03995 2.28e-257 - - - S - - - Nitronate monooxygenase
PDDFDHOE_03996 7.42e-256 rhlE 3.6.4.13 - JKL ko:K11927 ko03018,map03018 ko00000,ko00001,ko01000,ko03019 Belongs to the DEAD box helicase family
PDDFDHOE_03997 1.44e-88 cspG - - K - - - Cold-shock DNA-binding domain protein
PDDFDHOE_03998 4.41e-313 - - - G - - - Glycosyl hydrolase
PDDFDHOE_04000 6.3e-251 thiL 2.7.4.16 - H ko:K00946 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
PDDFDHOE_04001 3.05e-193 deoD 2.4.2.1 - F ko:K03783 ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110 ko00000,ko00001,ko01000 The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
PDDFDHOE_04002 4.33e-283 lpxK 2.7.1.130 - F ko:K00912 ko00540,ko01100,map00540,map01100 ko00000,ko00001,ko00002,ko01000,ko01005 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA)
PDDFDHOE_04003 0.0 sppA - - OU ko:K04773 - ko00000,ko01000,ko01002 signal peptide peptidase SppA, 67K type
PDDFDHOE_04004 0.0 - - - G - - - Glycosyl hydrolase family 92
PDDFDHOE_04005 2.64e-135 - - - K ko:K03088 - ko00000,ko03021 RNA polymerase sigma-70 factor
PDDFDHOE_04006 2.84e-239 - - - PT - - - Sigma factor regulatory protein, FecR PupR family
PDDFDHOE_04007 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PDDFDHOE_04008 0.0 - - - M ko:K21572 - ko00000,ko02000 SusD family
PDDFDHOE_04009 4.05e-243 - - - G - - - Glycosyl hydrolases family 43
PDDFDHOE_04010 0.0 bglX 3.2.1.21 GH3 G ko:K05349 ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110 ko00000,ko00001,ko01000 glycosyl hydrolase, family 3
PDDFDHOE_04011 0.0 - 3.2.1.20 GH31 M ko:K01187 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 COG NOG06228 non supervised orthologous group
PDDFDHOE_04012 1.76e-232 - - - S - - - COG NOG32009 non supervised orthologous group
PDDFDHOE_04013 1.28e-226 - - - - - - - -
PDDFDHOE_04014 7.15e-228 - - - - - - - -
PDDFDHOE_04015 2.22e-231 - 4.1.1.35 - GM ko:K08678 ko00520,ko01100,map00520,map01100 ko00000,ko00001,ko00002,ko01000 NAD dependent epimerase dehydratase family
PDDFDHOE_04016 2.93e-259 pleD 2.7.13.3 - T ko:K11527 - ko00000,ko01000,ko01001,ko02022 Response regulator receiver domain protein
PDDFDHOE_04017 0.0 - - - L - - - DNA-dependent ATPase I and helicase II
PDDFDHOE_04018 6.89e-190 - - - M ko:K03832 - ko00000,ko02000 Gram-negative bacterial TonB protein C-terminal
PDDFDHOE_04019 2.96e-156 pflA_1 1.97.1.4 - O ko:K04069 - ko00000,ko01000 4Fe-4S single cluster domain
PDDFDHOE_04020 0.0 addA - - L - - - Belongs to the helicase family. UvrD subfamily
PDDFDHOE_04021 1.65e-141 - - - K ko:K03088 - ko00000,ko03021 RNA polymerase sigma-70 factor, Bacteroides expansion family 1
PDDFDHOE_04022 2.61e-236 - - - PT - - - Domain of unknown function (DUF4974)
PDDFDHOE_04023 0.0 - 3.2.1.52 GH20 G ko:K12373 ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142 ko00000,ko00001,ko00002,ko01000,ko03110 Glycosyl hydrolase family 20, catalytic domain protein
PDDFDHOE_04024 4.93e-173 - - - S - - - Domain of unknown function
PDDFDHOE_04025 2.16e-285 - - - N - - - Concanavalin A-like lectin/glucanases superfamily
PDDFDHOE_04026 3.87e-288 - - - G - - - Glycosyl hydrolases family 18
PDDFDHOE_04027 0.0 - - - S - - - non supervised orthologous group
PDDFDHOE_04028 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PDDFDHOE_04029 0.0 gdh 1.4.1.4 - C ko:K00262 ko00220,ko00250,ko00910,ko01100,map00220,map00250,map00910,map01100 ko00000,ko00001,ko01000 Belongs to the Glu Leu Phe Val dehydrogenases family
PDDFDHOE_04030 2.62e-283 pepQ 3.4.11.9, 3.4.13.9 - E ko:K01262,ko:K01271 - ko00000,ko01000,ko01002 xaa-pro dipeptidase K01271
PDDFDHOE_04031 0.0 cca 2.7.7.19, 2.7.7.72 - J ko:K00970,ko:K00974 ko03013,ko03018,map03013,map03018 ko00000,ko00001,ko01000,ko03016,ko03019 tRNA nucleotidyltransferase poly(A) polymerase
PDDFDHOE_04032 1.75e-193 - - - - - - - -
PDDFDHOE_04033 3.8e-15 - - - - - - - -
PDDFDHOE_04034 2.66e-249 - - - S - - - COG NOG26961 non supervised orthologous group
PDDFDHOE_04035 1.19e-129 ruvA 3.6.4.12 - L ko:K03550 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
PDDFDHOE_04036 1.48e-215 ddh 1.4.1.16 - E ko:K03340 ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the reversible NADPH-dependent reductive amination of L-2-amino-6-oxopimelate, the acyclic form of L- tetrahydrodipicolinate, to generate the meso compound, D,L-2,6- diaminopimelate
PDDFDHOE_04037 1.29e-13 - - - E - - - Domain of Unknown Function with PDB structure (DUF3857)
PDDFDHOE_04038 1.02e-72 - - - - - - - -
PDDFDHOE_04039 2.07e-171 hly-III - - S ko:K11068 - ko00000,ko02042 membrane protein, hemolysin III homolog
PDDFDHOE_04040 1.02e-42 - - - K ko:K07729 - ko00000,ko03000 Helix-turn-helix domain
PDDFDHOE_04041 2.62e-100 - - - - - - - -
PDDFDHOE_04042 7.45e-167 rpiA 5.3.1.6 - G ko:K01807 ko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 COG COG0120 Ribose 5-phosphate isomerase
PDDFDHOE_04043 0.0 - - - L - - - Protein of unknown function (DUF3987)
PDDFDHOE_04045 3.38e-50 - - - S - - - Domain of unknown function (DUF4248)
PDDFDHOE_04046 1.53e-266 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_04047 3.62e-100 - - - L - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_04048 1.27e-104 - 3.5.1.28 - V ko:K01447 - ko00000,ko01000 N-acetylmuramoyl-L-alanine amidase
PDDFDHOE_04049 3.04e-09 - - - - - - - -
PDDFDHOE_04050 0.0 - - - M - - - COG3209 Rhs family protein
PDDFDHOE_04051 0.0 - - - M - - - COG COG3209 Rhs family protein
PDDFDHOE_04052 9.25e-71 - - - - - - - -
PDDFDHOE_04054 1.41e-84 - - - - - - - -
PDDFDHOE_04055 0.0 nrdD 1.1.98.6 - FK ko:K21636 ko00230,ko00240,ko01100,map00230,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score 8.96
PDDFDHOE_04056 4.59e-118 nrdG 1.97.1.4 - C ko:K04068 - ko00000,ko01000 Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PDDFDHOE_04057 0.0 - - - EGP ko:K08169 - ko00000,ko02000 the major facilitator superfamily
PDDFDHOE_04058 0.0 rseP - - M ko:K11749 ko02024,ko04112,map02024,map04112 ko00000,ko00001,ko01000,ko01002 zinc metalloprotease
PDDFDHOE_04059 2.79e-275 dxr 1.1.1.267 - I ko:K00099 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP)
PDDFDHOE_04060 5.28e-202 nlpD_1 - - M - - - Peptidase, M23 family
PDDFDHOE_04061 1.97e-124 rimM - - J ko:K02860 - ko00000,ko03009 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
PDDFDHOE_04062 1.88e-309 murA 2.5.1.7 - M ko:K00790 ko00520,ko00550,ko01100,map00520,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PDDFDHOE_04063 1.12e-149 - - - S - - - COG NOG11645 non supervised orthologous group
PDDFDHOE_04064 6.13e-165 yeaZ - - O ko:K14742 - ko00000,ko03016 Universal bacterial protein YeaZ
PDDFDHOE_04065 1.59e-185 - - - S - - - stress-induced protein
PDDFDHOE_04066 2.08e-132 gmk 2.7.4.8 - F ko:K00942 ko00230,ko01100,map00230,map01100 ko00000,ko00001,ko00002,ko01000 Essential for recycling GMP and indirectly, cGMP
PDDFDHOE_04067 8.49e-142 nadD 2.7.7.18 - H ko:K00969 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
PDDFDHOE_04068 3.8e-251 - - - S ko:K07098 - ko00000 Ser Thr phosphatase family protein
PDDFDHOE_04069 1.7e-202 menA 2.5.1.74 - H ko:K02548 ko00130,ko01100,ko01110,map00130,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko01006 Belongs to the MenA family. Type 1 subfamily
PDDFDHOE_04070 1.4e-287 rfbB 4.2.1.46 - M ko:K01710 ko00521,ko00523,ko00525,ko01055,ko01130,map00521,map00523,map00525,map01055,map01130 ko00000,ko00001,ko00002,ko01000 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
PDDFDHOE_04071 1.92e-207 rfbA 2.7.7.24 - H ko:K00973 ko00521,ko00523,ko00525,ko01130,map00521,map00523,map00525,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
PDDFDHOE_04072 1.48e-118 - - - S ko:K07095 - ko00000 Psort location Cytoplasmic, score 8.96
PDDFDHOE_04073 0.0 ppk 2.7.4.1 - H ko:K00937 ko00190,ko03018,map00190,map03018 ko00000,ko00001,ko01000,ko03019 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
PDDFDHOE_04074 0.0 - - - U - - - Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_04076 8.11e-97 - - - L - - - DNA-binding protein
PDDFDHOE_04077 4.06e-36 - - - S - - - Domain of unknown function (DUF4248)
PDDFDHOE_04078 0.0 - - - T - - - Psort location CytoplasmicMembrane, score
PDDFDHOE_04079 2.21e-126 - - - - - - - -
PDDFDHOE_04080 1.44e-57 - - - S - - - WYL_2, Sm-like SH3 beta-barrel fold
PDDFDHOE_04081 1.64e-21 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_04083 1.85e-177 - - - L - - - HNH endonuclease domain protein
PDDFDHOE_04084 1.27e-108 - - - V - - - N-acetylmuramoyl-L-alanine amidase
PDDFDHOE_04085 5.81e-130 - - - L - - - DnaD domain protein
PDDFDHOE_04086 3.1e-188 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_04087 2.23e-37 - - - P - - - Carboxypeptidase regulatory-like domain
PDDFDHOE_04088 0.0 - - - NPU - - - Psort location OuterMembrane, score 9.49
PDDFDHOE_04089 0.0 - - - H - - - COG NOG26372 non supervised orthologous group
PDDFDHOE_04090 5.59e-90 divK - - T - - - Response regulator receiver domain protein
PDDFDHOE_04091 0.0 - - - S ko:K06158 - ko00000,ko03012 Psort location CytoplasmicMembrane, score
PDDFDHOE_04092 2.03e-69 - - - S - - - COG NOG32090 non supervised orthologous group
PDDFDHOE_04093 4.84e-279 - - - M - - - Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PDDFDHOE_04094 0.0 czcA - - P - - - Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PDDFDHOE_04095 1.48e-269 - - - MU - - - outer membrane efflux protein
PDDFDHOE_04096 8.79e-200 - - - - - - - -
PDDFDHOE_04097 0.0 rsmF - - J - - - NOL1 NOP2 sun family
PDDFDHOE_04098 4.19e-161 - - - S - - - Psort location CytoplasmicMembrane, score
PDDFDHOE_04099 3.67e-126 rpoE - - K ko:K03088 - ko00000,ko03021 Belongs to the sigma-70 factor family. ECF subfamily
PDDFDHOE_04100 8.7e-65 - - - S - - - Domain of unknown function (DUF5056)
PDDFDHOE_04101 1.32e-303 cls - - M ko:K06131 ko00564,ko01100,map00564,map01100 ko00000,ko00001,ko01000 Belongs to the phospholipase D family. Cardiolipin synthase subfamily
PDDFDHOE_04102 8.15e-200 thyA 2.1.1.45 - F ko:K00560 ko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523 ko00000,ko00001,ko00002,ko01000 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
PDDFDHOE_04103 7.63e-117 folA 1.5.1.3 - H ko:K00287 ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523 ko00000,ko00001,ko00002,ko01000 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
PDDFDHOE_04104 1.62e-111 asnC - - K ko:K03718 - ko00000,ko03000 transcriptional regulator, AsnC family
PDDFDHOE_04105 0.0 - - - S - - - IgA Peptidase M64
PDDFDHOE_04106 3.17e-134 - - - K - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_04107 4.13e-99 - - - U ko:K03559 - ko00000,ko02000 COG NOG14448 non supervised orthologous group
PDDFDHOE_04108 6.99e-136 - - - U - - - COG NOG14449 non supervised orthologous group
PDDFDHOE_04109 2.77e-104 - - - S - - - Psort location CytoplasmicMembrane, score
PDDFDHOE_04110 3.94e-163 exbB - - U ko:K03561 - ko00000,ko02000 MotA TolQ ExbB proton channel family
PDDFDHOE_04112 1.63e-187 tatD - - L ko:K03424 - ko00000,ko01000 hydrolase, TatD family
PDDFDHOE_04113 9e-166 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_04114 3.26e-227 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29 - H ko:K13789 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000,ko01006 Belongs to the FPP GGPP synthase family
PDDFDHOE_04115 3.14e-156 - - - U ko:K03832 - ko00000,ko02000 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
PDDFDHOE_04116 1.89e-158 cmk 2.7.4.25 - F ko:K00945 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the cytidylate kinase family. Type 1 subfamily
PDDFDHOE_04117 2.85e-208 ispH 1.17.7.4 - IM ko:K03527 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
PDDFDHOE_04118 2.92e-231 pfkA 2.7.1.11 - F ko:K00850 ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04152,ko05230,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04152,map05230 ko00000,ko00001,ko00002,ko01000,ko01009,ko03019 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
PDDFDHOE_04120 7.09e-190 - - - IQ - - - Oxidoreductase, short chain dehydrogenase reductase family protein
PDDFDHOE_04121 1.19e-296 - - - C - - - Oxidoreductase, FAD FMN-binding protein
PDDFDHOE_04122 3.56e-184 - 1.3.1.22 - S ko:K12343 ko00140,map00140 ko00000,ko00001,ko01000 Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_04123 1.49e-26 - - - - - - - -
PDDFDHOE_04124 4.89e-152 - - - K - - - Acetyltransferase (GNAT) domain
PDDFDHOE_04125 0.0 prpC 2.3.3.1, 2.3.3.5 - C ko:K01647,ko:K01659 ko00020,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map00640,map01100,map01110,map01120,map01130,map01200,map01210,map01230 br01601,ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score
PDDFDHOE_04126 1.54e-291 icd 1.1.1.42 - C ko:K00031 ko00020,ko00480,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,ko04146,map00020,map00480,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230,map04146 br01601,ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score
PDDFDHOE_04127 0.0 acnA 4.2.1.3 - C ko:K01681 ko00020,ko00630,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230 br01601,ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score
PDDFDHOE_04128 0.0 - - - L - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_04129 4.55e-253 ilvC 1.1.1.86 - E ko:K00053 ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00770,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 ketol-acid reductoisomerase
PDDFDHOE_04130 8.74e-182 - 3.1.2.21 - I ko:K01071 ko00061,ko01100,map00061,map01100 ko00000,ko00001,ko01000,ko01004 Acyl-ACP thioesterase
PDDFDHOE_04131 1.87e-126 ilvN 2.2.1.6 - E ko:K01653 ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 COG0440 Acetolactate synthase, small (regulatory) subunit
PDDFDHOE_04132 0.0 ilvB 2.2.1.6 - H ko:K01652 ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Acetolactate synthase, large subunit
PDDFDHOE_04133 0.0 ilvD 4.2.1.9 - H ko:K01687 ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00770,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the IlvD Edd family
PDDFDHOE_04134 4.57e-129 slyD 5.2.1.8 - G ko:K03775 - ko00000,ko01000,ko03110 Psort location Cytoplasmic, score
PDDFDHOE_04135 1.7e-298 - - - S - - - Belongs to the UPF0597 family
PDDFDHOE_04136 1.41e-267 - - - S - - - non supervised orthologous group
PDDFDHOE_04137 1.64e-193 - - - S - - - COG NOG19137 non supervised orthologous group
PDDFDHOE_04138 7.73e-110 - - - S - - - Calycin-like beta-barrel domain
PDDFDHOE_04139 3e-75 - - - - - - - -
PDDFDHOE_04140 1.17e-38 - - - - - - - -
PDDFDHOE_04141 6.56e-48 - - - S - - - COG NOG33922 non supervised orthologous group
PDDFDHOE_04144 4.69e-282 - 3.5.1.25 - G ko:K01443 ko00520,ko01130,map00520,map01130 ko00000,ko00001,ko01000 Belongs to the metallo-dependent hydrolases superfamily. NagA family
PDDFDHOE_04145 3.6e-287 - 3.5.1.25 - G ko:K01443 ko00520,ko01130,map00520,map01130 ko00000,ko00001,ko01000 Belongs to the metallo-dependent hydrolases superfamily. NagA family
PDDFDHOE_04146 3.13e-83 - - - O - - - Glutaredoxin
PDDFDHOE_04147 1.17e-289 czcC - - MU ko:K15725 - ko00000,ko02000 Outer membrane efflux protein
PDDFDHOE_04148 7.32e-259 czcB - - M ko:K15727 - ko00000,ko02000 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PDDFDHOE_04149 0.0 czcA_1 - - P ko:K15726 - ko00000,ko02000 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PDDFDHOE_04150 3.06e-299 arlS_2 - - T - - - histidine kinase DNA gyrase B
PDDFDHOE_04151 8.23e-160 cusR - - T ko:K07665 ko02020,map02020 ko00000,ko00001,ko00002,ko01504,ko02022 Transcriptional regulatory protein, C terminal
PDDFDHOE_04152 0.0 - 3.2.1.20 GH31 S ko:K01187 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 COG NOG06228 non supervised orthologous group
PDDFDHOE_04153 0.0 - 6.2.1.3 - I ko:K01897 ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920 ko00000,ko00001,ko00002,ko01000,ko01004,ko04147 COG COG1022 Long-chain acyl-CoA synthetases (AMP-forming)
PDDFDHOE_04154 0.0 cvrA - - P ko:K11105 - ko00000,ko02000 Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_04155 1.05e-272 pyrP - - F ko:K02824 - ko00000,ko02000 Permease family
PDDFDHOE_04156 0.0 hcp 1.7.99.1 - C ko:K05601 ko00910,map00910 ko00000,ko00001,ko01000 Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O
PDDFDHOE_04157 6.59e-151 - - - K - - - Crp-like helix-turn-helix domain
PDDFDHOE_04158 3.42e-314 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
PDDFDHOE_04159 6.91e-314 zraR_2 - - T - - - COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains
PDDFDHOE_04160 2.65e-177 - - - S - - - COG NOG27188 non supervised orthologous group
PDDFDHOE_04161 5.31e-202 - - - S - - - Ser Thr phosphatase family protein
PDDFDHOE_04162 3.01e-246 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
PDDFDHOE_04163 0.0 tetP - - J ko:K18220 - br01600,ko00000,ko01504 Elongation Factor G, domain II
PDDFDHOE_04164 0.0 - - - L - - - Helicase C-terminal domain protein
PDDFDHOE_04165 1.11e-101 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_04166 0.0 - 5.99.1.2 - L ko:K03169 - ko00000,ko01000,ko03032 DNA topoisomerase
PDDFDHOE_04167 0.0 - - - S - - - COG NOG09947 non supervised orthologous group
PDDFDHOE_04168 9.92e-104 - - - - - - - -
PDDFDHOE_04169 4.95e-76 - - - S - - - DNA binding domain, excisionase family
PDDFDHOE_04170 3.71e-63 - - - S - - - Helix-turn-helix domain
PDDFDHOE_04171 7e-60 - - - S - - - DNA binding domain, excisionase family
PDDFDHOE_04172 2.78e-82 - - - S - - - COG3943, virulence protein
PDDFDHOE_04173 2.34e-305 - - - L - - - Belongs to the 'phage' integrase family
PDDFDHOE_04174 1.16e-239 dus - - H - - - Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PDDFDHOE_04175 9.79e-232 - - - I - - - Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_04176 2.11e-249 - 5.1.3.2 - M ko:K01784 ko00052,ko00520,ko01100,map00052,map00520,map01100 ko00000,ko00001,ko00002,ko01000 NAD dependent epimerase dehydratase family
PDDFDHOE_04178 0.0 rnr - - J ko:K12573,ko:K12585 ko03018,map03018 ko00000,ko00001,ko00002,ko01000,ko03016,ko03019 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
PDDFDHOE_04179 4.45e-109 - - - S ko:K07005 - ko00000 Pyridoxamine 5'-phosphate oxidase family protein
PDDFDHOE_04180 8.37e-53 - - - K - - - Sigma-70, region 4
PDDFDHOE_04181 4.64e-78 - - - PT - - - Domain of unknown function (DUF4974)
PDDFDHOE_04182 0.0 - - - E - - - Domain of Unknown Function with PDB structure (DUF3857)
PDDFDHOE_04183 0.0 - - - E - - - Domain of Unknown Function with PDB structure (DUF3858)
PDDFDHOE_04184 7.45e-111 - - - K - - - acetyltransferase
PDDFDHOE_04185 2.13e-142 - - - O - - - Heat shock protein
PDDFDHOE_04186 4.8e-115 - - - K - - - LytTr DNA-binding domain
PDDFDHOE_04187 5.21e-167 - - - T - - - Histidine kinase
PDDFDHOE_04188 4.07e-187 - - - M ko:K03585 ko01501,ko01503,map01501,map01503 ko00000,ko00001,ko00002,ko01504,ko02000,ko03036 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PDDFDHOE_04189 0.0 - - - V ko:K03296 - ko00000 AcrB/AcrD/AcrF family
PDDFDHOE_04190 2e-224 - - - MU - - - Efflux transporter, outer membrane factor
PDDFDHOE_04191 1.42e-47 - - - S - - - Winged helix-turn-helix domain (DUF2582)
PDDFDHOE_04192 2.51e-283 - - - I - - - Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_04193 2.47e-131 - - - T - - - Cyclic nucleotide-binding domain protein
PDDFDHOE_04194 0.0 - - - E ko:K21572 - ko00000,ko02000 Pfam:SusD
PDDFDHOE_04195 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PDDFDHOE_04196 0.0 - - - - - - - -
PDDFDHOE_04198 5.1e-267 - - - L - - - Belongs to the 'phage' integrase family
PDDFDHOE_04199 2.38e-272 - - - L - - - Arm DNA-binding domain
PDDFDHOE_04200 1.27e-66 - - - S - - - COG3943, virulence protein
PDDFDHOE_04201 2.31e-63 - - - S - - - DNA binding domain, excisionase family
PDDFDHOE_04202 1.43e-67 - - - K - - - COG NOG34759 non supervised orthologous group
PDDFDHOE_04204 4.29e-96 - - - S - - - Protein of unknown function (DUF3408)
PDDFDHOE_04205 1.77e-88 - - - - - - - -
PDDFDHOE_04206 2.55e-167 - - - T ko:K02477 - ko00000,ko02022 LytTr DNA-binding domain
PDDFDHOE_04207 3.36e-225 - - - T - - - Histidine kinase
PDDFDHOE_04208 1.15e-104 - - - J - - - Acetyltransferase (GNAT) domain
PDDFDHOE_04209 2.53e-221 - - - M ko:K03585 ko01501,ko01503,map01501,map01503 ko00000,ko00001,ko00002,ko01504,ko02000,ko03036 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PDDFDHOE_04210 0.0 - - - V ko:K03296 - ko00000 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PDDFDHOE_04211 1.82e-282 - - - MU - - - Efflux transporter, outer membrane factor lipoprotein, NodT family
PDDFDHOE_04212 0.0 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
PDDFDHOE_04213 1.9e-296 zraR - - T ko:K07713 ko02020,map02020 ko00000,ko00001,ko00002,ko02022 Sigma-54 interaction domain protein
PDDFDHOE_04214 3.55e-108 - - - S - - - AAA ATPase domain
PDDFDHOE_04215 2.93e-139 - - - S - - - AAA ATPase domain
PDDFDHOE_04216 4.48e-195 - 2.1.1.72 - H ko:K06223 ko03430,map03430 ko00000,ko00001,ko01000,ko02048,ko03032,ko03400 D12 class N6 adenine-specific DNA methyltransferase
PDDFDHOE_04217 1.18e-294 - - - K - - - DNA binding
PDDFDHOE_04218 6.54e-260 - - - L - - - Belongs to the 'phage' integrase family
PDDFDHOE_04220 5.1e-301 ffh 3.6.5.4 - U ko:K03106 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko01000,ko02044 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
PDDFDHOE_04221 3.29e-297 - - - V - - - MATE efflux family protein
PDDFDHOE_04222 0.0 - - - T - - - COG0642 Signal transduction histidine kinase
PDDFDHOE_04223 0.0 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
PDDFDHOE_04224 0.0 - 3.1.6.6 - P ko:K01133 - ko00000,ko01000 COG COG3119 Arylsulfatase A and related enzymes
PDDFDHOE_04225 0.0 rho - - K ko:K03628 ko03018,map03018 ko00000,ko00001,ko03019,ko03021 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
PDDFDHOE_04226 8.04e-230 - - - C - - - 4Fe-4S binding domain
PDDFDHOE_04227 5.57e-307 tilS 6.3.4.19 - D ko:K04075 - ko00000,ko01000,ko03016 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
PDDFDHOE_04228 0.0 feoB - - P ko:K04759 - ko00000,ko02000 transporter of a GTP-driven Fe(2 ) uptake system
PDDFDHOE_04229 5.7e-48 - - - - - - - -
PDDFDHOE_04231 0.0 - - - S - - - TonB-dependent Receptor Plug Domain
PDDFDHOE_04232 1.13e-249 - - - - - - - -
PDDFDHOE_04233 4.92e-21 - - - S - - - Fic/DOC family
PDDFDHOE_04235 2.42e-16 - - - - - - - -
PDDFDHOE_04236 1.92e-57 - - - - - - - -
PDDFDHOE_04237 5.08e-87 - - - - - - - -
PDDFDHOE_04238 4.84e-106 - - - C ko:K02121 ko00190,ko01100,map00190,map01100 ko00000,ko00001,ko00002 COG NOG11642 non supervised orthologous group
PDDFDHOE_04239 6.12e-194 - - - C - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_04240 0.0 atpA 3.6.3.14, 3.6.3.15 - C ko:K02117 ko00190,ko01100,map00190,map01100 ko00000,ko00001,ko00002,ko01000 Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit
PDDFDHOE_04241 0.0 ntpB - - C ko:K02118 ko00190,ko01100,map00190,map01100 ko00000,ko00001,ko00002 ATP synthase alpha beta family, nucleotide-binding domain protein
PDDFDHOE_04242 5.05e-131 - - - C ko:K02120 ko00190,ko01100,map00190,map01100 ko00000,ko00001,ko00002 Psort location Cytoplasmic, score 8.96
PDDFDHOE_04243 0.0 - - - C ko:K02123 ko00190,ko01100,map00190,map01100 ko00000,ko00001,ko00002 Belongs to the V-ATPase 116 kDa subunit family
PDDFDHOE_04244 8.7e-95 ntpK - - C ko:K02124 ko00190,ko01100,map00190,map01100 ko00000,ko00001,ko00002 COG COG0636 F0F1-type ATP synthase, subunit c Archaeal vacuolar-type H -ATPase, subunit K
PDDFDHOE_04245 0.0 - 2.4.1.11 GT3 G ko:K00693 ko00500,ko01100,ko04151,ko04152,ko04910,ko04922,ko04931,map00500,map01100,map04151,map04152,map04910,map04922,map04931 ko00000,ko00001,ko01000,ko01003 Starch synthase
PDDFDHOE_04246 0.0 glgP 2.4.1.1, 2.4.1.11, 2.4.1.8 GH65,GT3,GT35 G ko:K00688,ko:K00691,ko:K16153 ko00500,ko01100,ko01110,ko02026,ko04217,ko04910,ko04922,ko04931,map00500,map01100,map01110,map02026,map04217,map04910,map04922,map04931 ko00000,ko00001,ko01000,ko01003 COG0058 Glucan phosphorylase
PDDFDHOE_04247 2.51e-259 - - - O - - - Antioxidant, AhpC TSA family
PDDFDHOE_04248 0.0 potA 3.6.3.31 - P ko:K10112,ko:K11072,ko:K17324 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
PDDFDHOE_04249 2.14e-176 - - - P ko:K11071 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_04250 7.28e-174 ydcV - - P ko:K11070 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter, permease protein
PDDFDHOE_04251 0.0 potD - - P ko:K11069 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Psort location Periplasmic, score 9.44
PDDFDHOE_04252 8.83e-147 - - - L - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_04253 1.91e-142 - - - S - - - Domain of unknown function (DUF4840)
PDDFDHOE_04254 0.0 - - - T - - - helix_turn_helix, arabinose operon control protein
PDDFDHOE_04256 1.55e-169 - - - S - - - Domain of Unknown Function with PDB structure
PDDFDHOE_04257 4.57e-135 - - - T - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_04258 1.31e-214 - - - K - - - methylphosphotriester-DNA alkyltransferase and transcriptional regulator (AraC XylS family)
PDDFDHOE_04259 0.0 cpdB 3.1.3.6, 3.1.4.16 - F ko:K01119 ko00230,ko00240,map00230,map00240 ko00000,ko00001,ko01000 Belongs to the 5'-nucleotidase family
PDDFDHOE_04260 0.0 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
PDDFDHOE_04261 0.0 yhgF - - K ko:K06959 - ko00000 Tex-like protein N-terminal domain
PDDFDHOE_04262 2.54e-211 - - - S ko:K07052 - ko00000 CAAX amino terminal protease family protein
PDDFDHOE_04263 4.42e-249 - - - S - - - COG NOG26673 non supervised orthologous group
PDDFDHOE_04264 0.0 - - - S - - - COG COG0488 ATPase components of ABC transporters with duplicated ATPase domains
PDDFDHOE_04265 3.45e-125 grpE - - O ko:K03687 - ko00000,ko03029,ko03110 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
PDDFDHOE_04266 3.34e-231 dnaJ - - O ko:K03686 - ko00000,ko03029,ko03110 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
PDDFDHOE_04267 0.0 - - - M ko:K21572 - ko00000,ko02000 SusD family
PDDFDHOE_04268 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PDDFDHOE_04269 0.0 - - - DM - - - Chain length determinant protein
PDDFDHOE_04270 3.96e-71 - - - G - - - COG NOG16664 non supervised orthologous group
PDDFDHOE_04271 2.33e-206 - - - M - - - COG COG1082 Sugar phosphate isomerases epimerases
PDDFDHOE_04272 3.99e-20 - - - S - - - COG NOG38865 non supervised orthologous group
PDDFDHOE_04273 0.0 - 6.2.1.3 - I ko:K01897 ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920 ko00000,ko00001,ko00002,ko01000,ko01004,ko04147 Psort location CytoplasmicMembrane, score 9.82
PDDFDHOE_04274 0.0 yqeV 2.8.4.5 - J ko:K18707 - ko00000,ko01000,ko03016 Psort location Cytoplasmic, score 8.96
PDDFDHOE_04275 6.88e-210 waaM 2.3.1.241 - M ko:K02517 ko00540,ko01100,map00540,map01100 ko00000,ko00001,ko00002,ko01000,ko01005 Lipid A biosynthesis (KDO)2-(Lauroyl)-lipid IVA acyltransferase
PDDFDHOE_04276 5.02e-256 - - - S ko:K07011 - ko00000 Glycosyl transferase family group 2
PDDFDHOE_04277 6.68e-125 mgsA 4.2.3.3 - G ko:K01734 ko00640,ko01120,map00640,map01120 ko00000,ko00001,ko01000 methylglyoxal synthase
PDDFDHOE_04278 9.61e-84 folB 1.13.11.81, 4.1.2.25, 5.1.99.8 - H ko:K01633 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
PDDFDHOE_04279 3.61e-244 - - - M - - - Glycosyl transferases group 1
PDDFDHOE_04280 6.77e-247 - - - G - - - Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_04281 0.0 malQ 2.4.1.25 GH77 G ko:K00705 ko00500,ko01100,map00500,map01100 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score 9.26
PDDFDHOE_04282 0.0 nrd 1.17.4.1 - F ko:K00525 ko00230,ko00240,ko01100,map00230,map00240,map01100 ko00000,ko00001,ko00002,ko01000,ko03400 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen
PDDFDHOE_04283 1.56e-174 - 1.5.1.38, 1.5.1.39 - C ko:K19285,ko:K19286 ko00740,ko01100,map00740,map01100 ko00000,ko00001,ko01000 Nitroreductase family
PDDFDHOE_04284 0.0 dnaA - - L ko:K02313 ko02020,ko04112,map02020,map04112 ko00000,ko00001,ko03032,ko03036 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
PDDFDHOE_04285 1.67e-195 - - - Q ko:K02067 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component
PDDFDHOE_04286 1.9e-295 amiA 3.5.1.28 - M ko:K01448 ko01503,map01503 ko00000,ko00001,ko00002,ko01000,ko01011,ko03036 N-acetylmuramoyl-L-alanine amidase
PDDFDHOE_04287 2.34e-209 - - - S ko:K03453 - ko00000 Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_04288 1.87e-123 - - - - - - - -
PDDFDHOE_04289 9.42e-147 - - - - - - - -
PDDFDHOE_04290 4.34e-163 - - - S - - - Conjugative transposon, TraM
PDDFDHOE_04291 9.85e-261 - - - U - - - Domain of unknown function (DUF4138)
PDDFDHOE_04293 1.75e-39 - - - K - - - TRANSCRIPTIONal
PDDFDHOE_04294 2.79e-163 - - - Q - - - Multicopper oxidase
PDDFDHOE_04295 1.21e-115 - - - S - - - Conjugative transposon protein TraO
PDDFDHOE_04296 3.07e-103 - - - S - - - PLAT/LH2 and C2-like Ca2+-binding lipoprotein
PDDFDHOE_04297 3.7e-60 - - - S - - - COG NOG30576 non supervised orthologous group
PDDFDHOE_04298 3.1e-101 - - - - - - - -
PDDFDHOE_04299 1.74e-52 - - - S - - - Winged helix-turn-helix domain (DUF2582)
PDDFDHOE_04300 1.17e-38 - - - S - - - Winged helix-turn-helix domain (DUF2582)
PDDFDHOE_04301 1.63e-73 - - - - - - - -
PDDFDHOE_04302 7.02e-53 - - - - - - - -
PDDFDHOE_04303 1.22e-287 - - - M - - - Protein of unknown function (DUF3575)
PDDFDHOE_04304 2.3e-227 - - - S - - - COG NOG26135 non supervised orthologous group
PDDFDHOE_04305 7.47e-260 - - - S - - - Fimbrillin-like
PDDFDHOE_04306 2.02e-52 - - - - - - - -
PDDFDHOE_04307 4.63e-175 - - - D ko:K03496 - ko00000,ko03036,ko04812 CobQ CobB MinD ParA nucleotide binding domain protein
PDDFDHOE_04308 4.81e-80 - - - - - - - -
PDDFDHOE_04309 4.68e-196 - - - S - - - COG3943 Virulence protein
PDDFDHOE_04310 4.3e-142 - - - L - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_04311 0.0 - - - S - - - PFAM Fic DOC family
PDDFDHOE_04312 1.8e-95 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_04314 2.01e-244 - - - L - - - DNA primase TraC
PDDFDHOE_04315 4.34e-126 - - - - - - - -
PDDFDHOE_04316 4.64e-111 - - - - - - - -
PDDFDHOE_04317 3.39e-90 - - - - - - - -
PDDFDHOE_04318 9.95e-252 ce 5.1.3.8 - G ko:K01787 ko00520,map00520 ko00000,ko00001,ko01000 COG COG2942 N-acyl-D-glucosamine 2-epimerase
PDDFDHOE_04319 2.07e-260 - - - S - - - Domain of unknown function (DUF5109)
PDDFDHOE_04320 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PDDFDHOE_04321 0.0 - - - F ko:K21572 - ko00000,ko02000 SusD family
PDDFDHOE_04322 7.18e-313 - - - S - - - Domain of unknown function (DUF5018)
PDDFDHOE_04323 1.64e-312 - - - S - - - Domain of unknown function
PDDFDHOE_04324 2.55e-306 - 3.1.1.53 - G ko:K05970 - ko00000,ko01000 COG NOG04984 non supervised orthologous group
PDDFDHOE_04325 0.0 - - - S - - - C terminal of Calcineurin-like phosphoesterase
PDDFDHOE_04326 1.45e-300 - 3.1.1.53 - G ko:K05970 - ko00000,ko01000 COG NOG04984 non supervised orthologous group
PDDFDHOE_04327 5.57e-306 - - - S - - - Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_04328 8.14e-228 - - - G - - - Phosphodiester glycosidase
PDDFDHOE_04329 9.84e-228 - - - E - - - COG NOG09493 non supervised orthologous group
PDDFDHOE_04331 1.43e-103 - - - L - - - Psort location Cytoplasmic, score
PDDFDHOE_04332 3.71e-190 - - - S - - - COG NOG19137 non supervised orthologous group
PDDFDHOE_04333 1.56e-193 - - - S - - - non supervised orthologous group
PDDFDHOE_04335 2.51e-84 - - - - - - - -
PDDFDHOE_04336 5.79e-39 - - - - - - - -
PDDFDHOE_04337 7.99e-120 - - - K ko:K03088 - ko00000,ko03021 RNA polymerase sigma-70 factor, Bacteroides expansion family 1
PDDFDHOE_04338 6.57e-226 - - - PT - - - Sigma factor regulatory protein, FecR PupR family
PDDFDHOE_04339 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PDDFDHOE_04340 0.0 - - - S - - - non supervised orthologous group
PDDFDHOE_04341 1.39e-286 - - - G - - - Putative glycoside hydrolase Family 18, chitinase_18
PDDFDHOE_04342 3.89e-285 - - - NU - - - bacterial-type flagellum-dependent cell motility
PDDFDHOE_04343 0.0 acsA 6.2.1.1, 6.2.1.32 - I ko:K01895,ko:K08295 ko00010,ko00620,ko00627,ko00640,ko00680,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00620,map00627,map00640,map00680,map00720,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000,ko01004 Psort location Cytoplasmic, score
PDDFDHOE_04344 2.57e-127 - - - K - - - Cupin domain protein
PDDFDHOE_04345 1.87e-172 proC 1.5.1.2 - E ko:K00286 ko00330,ko01100,ko01110,ko01130,ko01230,map00330,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
PDDFDHOE_04346 4.1e-273 argD 2.6.1.11, 2.6.1.17 - E ko:K00821 ko00220,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00220,map00300,map01100,map01110,map01120,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
PDDFDHOE_04347 9.86e-237 argC 1.2.1.38 - E ko:K00145 ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
PDDFDHOE_04348 5.19e-293 argG 6.3.4.5 - E ko:K01940 ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,ko05418,map00220,map00250,map01100,map01110,map01130,map01230,map05418 ko00000,ko00001,ko00002,ko01000,ko04147 argininosuccinate synthase
PDDFDHOE_04349 1.04e-139 - - - J - - - Acetyltransferase (GNAT) domain
PDDFDHOE_04350 1.89e-100 argR - - K ko:K03402 - ko00000,ko03000 Regulates arginine biosynthesis genes
PDDFDHOE_04351 1.01e-10 - - - - - - - -
PDDFDHOE_04352 0.0 rhaB 2.7.1.5, 2.7.1.51 - G ko:K00848,ko:K00879 ko00040,ko00051,ko01120,map00040,map00051,map01120 ko00000,ko00001,ko01000 Involved in the catabolism of L-rhamnose (6-deoxy-L- mannose). Catalyzes the transfer of the gamma-phosphate group from ATP to the 1-hydroxyl group of L-rhamnulose to yield L-rhamnulose 1-phosphate
PDDFDHOE_04353 1.43e-314 rhaA 5.3.1.14 - G ko:K01813 ko00051,ko01120,map00051,map01120 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score 8.96
PDDFDHOE_04354 9.91e-241 rhaT - - EG ko:K02856 - ko00000,ko02000 Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_04355 1.15e-197 rhaD 4.1.2.19 - G ko:K01629 ko00040,ko00051,ko01120,map00040,map00051,map01120 ko00000,ko00001,ko01000 COG COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases
PDDFDHOE_04356 2.78e-272 fucO 1.1.1.77 - C ko:K00048 ko00630,ko00640,ko01120,map00630,map00640,map01120 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score
PDDFDHOE_04357 6.27e-217 - - - K - - - Psort location Cytoplasmic, score 9.26
PDDFDHOE_04358 9.63e-85 - - - S - - - Domain of unknown function (DUF4890)
PDDFDHOE_04360 3.21e-136 qacR - - K - - - transcriptional regulator, TetR family
PDDFDHOE_04361 3.5e-168 fabG 1.1.1.100 - IQ ko:K00059 ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 with different specificities (related to short-chain alcohol
PDDFDHOE_04362 2.15e-161 rluC 5.4.99.23, 5.4.99.28, 5.4.99.29 - J ko:K06177,ko:K06180 - ko00000,ko01000,ko03009,ko03016 ribosomal pseudouridine synthase C, large subunit
PDDFDHOE_04363 0.0 - - - G - - - Alpha-1,2-mannosidase
PDDFDHOE_04364 0.0 - 3.2.1.24 GH38 G ko:K01191 ko00511,map00511 ko00000,ko00001,ko01000,ko04131 Glycosyl hydrolase family 38 C-terminal domain protein
PDDFDHOE_04366 5.5e-169 - - - M - - - pathogenesis
PDDFDHOE_04367 3.58e-183 - - - M - - - Glycosyltransferase sugar-binding region containing DXD motif
PDDFDHOE_04369 2.4e-192 - 3.1.3.6, 3.1.4.16 - M ko:K01119,ko:K02450,ko:K14197 ko00230,ko00240,ko05150,map00230,map00240,map05150 ko00000,ko00001,ko00002,ko01000,ko02044 LysM domain
PDDFDHOE_04370 0.0 - - - - - - - -
PDDFDHOE_04371 2.19e-298 - 3.2.1.197 - G ko:K21065 - ko00000,ko01000 beta-1,4-mannooligosaccharide phosphorylase
PDDFDHOE_04372 0.0 - - - S ko:K09704 - ko00000 Conserved protein
PDDFDHOE_04373 2.68e-301 - - - G - - - Glycosyl hydrolase family 76
PDDFDHOE_04374 1.78e-240 - - - S - - - Endonuclease Exonuclease phosphatase family
PDDFDHOE_04375 0.0 - - - G - - - Glycosyl hydrolase family 92
PDDFDHOE_04376 0.0 - - - T - - - Response regulator receiver domain protein
PDDFDHOE_04377 2.63e-296 - - - S - - - IPT/TIG domain
PDDFDHOE_04378 0.0 - - - P - - - TonB dependent receptor
PDDFDHOE_04379 0.0 - - - P ko:K21572 - ko00000,ko02000 non supervised orthologous group
PDDFDHOE_04380 6.65e-180 - - - S - - - Domain of unknown function (DUF4361)
PDDFDHOE_04381 1.18e-314 - - - S - - - Concanavalin A-like lectin/glucanases superfamily
PDDFDHOE_04382 0.0 - - - G - - - Glycosyl hydrolase family 76
PDDFDHOE_04383 4.42e-33 - - - - - - - -
PDDFDHOE_04385 0.0 - - - P - - - COG COG3119 Arylsulfatase A and related enzymes
PDDFDHOE_04386 0.0 - - - G - - - Raffinose synthase or seed imbibition protein Sip1
PDDFDHOE_04387 0.0 - - - G - - - Alpha-L-fucosidase
PDDFDHOE_04388 0.0 - - - P - - - COG COG3119 Arylsulfatase A and related enzymes
PDDFDHOE_04389 0.0 - - - T - - - cheY-homologous receiver domain
PDDFDHOE_04390 0.0 - - - T ko:K07713 ko02020,map02020 ko00000,ko00001,ko00002,ko02022 COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains
PDDFDHOE_04391 1.35e-201 - 5.2.1.8 - M ko:K01802,ko:K03768 - ko00000,ko01000,ko03110 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
PDDFDHOE_04392 1.06e-297 - - - S ko:K07263 - ko00000,ko01000,ko01002 Peptidase M16 inactive domain protein
PDDFDHOE_04393 0.0 norM - - V ko:K03327 - ko00000,ko02000 MATE efflux family protein
PDDFDHOE_04394 0.0 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
PDDFDHOE_04395 0.0 - - - S - - - Psort location OuterMembrane, score 9.49
PDDFDHOE_04396 0.0 - - - M - - - Outer membrane protein, OMP85 family
PDDFDHOE_04397 2.48e-225 - - - JM - - - COG NOG09722 non supervised orthologous group
PDDFDHOE_04398 0.0 - - - S ko:K06158 - ko00000,ko03012 ABC transporter, ATP-binding protein
PDDFDHOE_04399 0.0 pepO - - O ko:K07386 - ko00000,ko01000,ko01002 Peptidase family M13
PDDFDHOE_04400 0.0 purH 2.1.2.3, 3.5.4.10 - F ko:K00602 ko00230,ko00670,ko01100,ko01110,ko01130,ko01523,map00230,map00670,map01100,map01110,map01130,map01523 ko00000,ko00001,ko00002,ko01000,ko04147 bifunctional purine biosynthesis protein PurH
PDDFDHOE_04401 5.31e-241 mreB - - D ko:K03569 - ko00000,ko02048,ko03036,ko04812 Cell shape determining protein, MreB Mrl family
PDDFDHOE_04402 2.49e-193 mreC - - M ko:K03570 - ko00000,ko03036 Involved in formation and maintenance of cell shape
PDDFDHOE_04403 9.96e-109 mreD - - S - - - rod shape-determining protein MreD
PDDFDHOE_04404 0.0 mrdA 3.4.16.4 - M ko:K05515 ko00550,ko01501,map00550,map01501 ko00000,ko00001,ko01000,ko01011 penicillin-binding protein 2
PDDFDHOE_04405 0.0 rodA - - D ko:K05837 - ko00000,ko03036 Belongs to the SEDS family
PDDFDHOE_04406 2.39e-104 gldH - - S - - - Gliding motility-associated lipoprotein GldH
PDDFDHOE_04407 1.17e-266 yaaT - - S - - - PSP1 C-terminal domain protein
PDDFDHOE_04408 7.35e-272 holB 2.7.7.7 - L ko:K02341 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 COG2812 DNA polymerase III gamma tau subunits
PDDFDHOE_04409 4.15e-231 metF 1.5.1.20 - C ko:K00297 ko00670,ko00720,ko01100,ko01120,ko01200,ko01523,map00670,map00720,map01100,map01120,map01200,map01523 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score
PDDFDHOE_04410 1.96e-109 - - - - - - - -
PDDFDHOE_04411 6.96e-116 - 1.16.3.1 - S ko:K03594 ko00860,map00860 ko00000,ko00001,ko01000 Ferritin-like domain
PDDFDHOE_04412 1.55e-220 - - - L - - - AAA domain
PDDFDHOE_04414 6.77e-71 - - - - - - - -
PDDFDHOE_04415 0.0 - - - P ko:K02014 - ko00000,ko02000 COG COG1629 Outer membrane receptor proteins, mostly Fe transport
PDDFDHOE_04416 6.77e-111 - - - S - - - Domain of unknown function (DUF4625)
PDDFDHOE_04417 2.02e-149 nrfH - - C ko:K15876 ko00910,ko01120,map00910,map01120 ko00000,ko00001,ko00002 COG COG3005 Nitrate TMAO reductases, membrane-bound tetraheme cytochrome c subunit
PDDFDHOE_04418 0.0 nrfA 1.7.2.2 - C ko:K03385 ko00910,ko01120,ko05132,map00910,map01120,map05132 ko00000,ko00001,ko00002,ko01000 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process
PDDFDHOE_04419 1.39e-297 ccs1 - - O - - - Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_04420 3.59e-198 ycf - - O - - - COG COG0755 ABC-type transport system involved in cytochrome c biogenesis, permease component
PDDFDHOE_04421 0.0 - - - M - - - COG NOG37029 non supervised orthologous group
PDDFDHOE_04422 7.44e-232 - - - L - - - COG COG3547 Transposase and inactivated derivatives
PDDFDHOE_04423 2.3e-159 - - - K - - - COG COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
PDDFDHOE_04424 6.38e-130 ywqN - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_04425 1.14e-124 ogt 2.1.1.63 - H ko:K00567,ko:K10778 - ko00000,ko01000,ko03000,ko03400 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
PDDFDHOE_04426 2.81e-195 - 2.5.1.105 - S ko:K06897 ko00790,map00790 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score 8.96
PDDFDHOE_04427 0.0 - - - M ko:K08676 - ko00000,ko01000,ko01002 Tricorn protease homolog
PDDFDHOE_04428 5.37e-146 - - - S - - - Membrane
PDDFDHOE_04429 1.55e-195 - - - K - - - helix_turn_helix, arabinose operon control protein
PDDFDHOE_04430 0.0 dxs2 2.2.1.7 - H ko:K01662 ko00730,ko00900,ko01100,ko01110,ko01130,map00730,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
PDDFDHOE_04432 0.0 - - - S - - - Tetratricopeptide repeat protein
PDDFDHOE_04433 6.32e-169 - - - S - - - COG NOG27017 non supervised orthologous group
PDDFDHOE_04434 0.0 atsB - - C ko:K06871 - ko00000 COG0641 Arylsulfatase regulator (Fe-S oxidoreductase)
PDDFDHOE_04435 0.0 dpp11 - - E - - - COG NOG04781 non supervised orthologous group
PDDFDHOE_04436 0.0 - - - S - - - COG NOG06390 non supervised orthologous group
PDDFDHOE_04437 3.69e-37 - - - - - - - -
PDDFDHOE_04438 1.87e-270 - - - M - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_04439 2.15e-67 - - - O ko:K03671 ko04621,ko05418,map04621,map05418 ko00000,ko00001,ko03110 Psort location Cytoplasmic, score
PDDFDHOE_04440 3.57e-108 - - - O - - - Thioredoxin
PDDFDHOE_04441 7.94e-135 - - - C - - - Nitroreductase family
PDDFDHOE_04442 2.58e-137 rbr3A - - C - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_04443 3.67e-102 fur - - P ko:K03711,ko:K09825 - ko00000,ko03000 Belongs to the Fur family
PDDFDHOE_04444 6.6e-115 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_04445 1.29e-195 - - - S - - - Protein of unknown function (DUF1573)
PDDFDHOE_04446 0.0 - - - O - - - Psort location Extracellular, score
PDDFDHOE_04447 0.0 - - - S - - - Putative binding domain, N-terminal
PDDFDHOE_04448 0.0 - - - S - - - leucine rich repeat protein
PDDFDHOE_04449 7.04e-59 - - - S - - - Domain of unknown function (DUF5030)
PDDFDHOE_04450 6.51e-38 - - - S - - - JAB-like toxin 1
PDDFDHOE_04451 0.0 - - - V ko:K06147 - ko00000,ko02000 ABC transporter, ATP-binding protein
PDDFDHOE_04452 9.54e-288 - - - V - - - HlyD family secretion protein
PDDFDHOE_04453 0.0 - - - S - - - P-loop ATPase and inactivated derivatives
PDDFDHOE_04454 0.0 - - - H - - - COG NOG08812 non supervised orthologous group
PDDFDHOE_04455 1.89e-160 - - - - - - - -
PDDFDHOE_04456 0.0 - - - S - - - Fibronectin type 3 domain
PDDFDHOE_04457 9.51e-245 - - - S - - - Domain of unknown function (DUF4361)
PDDFDHOE_04458 0.0 - - - P - - - SusD family
PDDFDHOE_04459 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PDDFDHOE_04460 0.0 - - - S - - - NHL repeat
PDDFDHOE_04461 1.3e-128 rfbC 5.1.3.13 - G ko:K01790 ko00521,ko00523,ko01130,map00521,map00523,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
PDDFDHOE_04462 3.62e-214 rfbA 2.7.7.24 - H ko:K00973 ko00521,ko00523,ko00525,ko01130,map00521,map00523,map00525,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
PDDFDHOE_04463 1.28e-136 - - - K - - - Transcription termination antitermination factor NusG
PDDFDHOE_04464 0.0 - 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 2 family
PDDFDHOE_04465 0.0 nagZ3 3.2.1.52 GH20 G ko:K12373 ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142 ko00000,ko00001,ko00002,ko01000,ko03110 Glycosyl hydrolase family 20, catalytic domain
PDDFDHOE_04466 0.0 - 3.2.1.52 GH20 G ko:K12373 ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142 ko00000,ko00001,ko00002,ko01000,ko03110 Glycosyl hydrolase family 20, catalytic domain protein
PDDFDHOE_04467 0.0 - 3.2.1.25 - G ko:K01192 ko00511,ko04142,map00511,map04142 ko00000,ko00001,ko01000 Glycosyl hydrolase family 2, sugar binding domain protein
PDDFDHOE_04468 0.0 estS 3.1.1.53 - E ko:K05970 - ko00000,ko01000 Carbohydrate esterase, sialic acid-specific acetylesterase
PDDFDHOE_04469 0.0 - - - G - - - Glycosyl hydrolase family 20, catalytic domain
PDDFDHOE_04470 0.0 nanH 3.2.1.18 GH33 G ko:K01186 ko00511,ko00600,ko04142,map00511,map00600,map04142 ko00000,ko00001,ko01000,ko02042 BNR Asp-box repeat protein
PDDFDHOE_04471 0.0 ppsA - - GKT - - - Pyruvate phosphate dikinase, PEP pyruvate binding domain
PDDFDHOE_04472 0.0 katA 1.11.1.6 - P ko:K03781 ko00380,ko00630,ko01110,ko01130,ko01200,ko04011,ko04016,ko04068,ko04146,ko04211,ko04212,ko04213,ko05014,map00380,map00630,map01110,map01130,map01200,map04011,map04016,map04068,map04146,map04211,map04212,map04213,map05014 ko00000,ko00001,ko00002,ko01000 Belongs to the catalase family
PDDFDHOE_04473 0.0 gdhA 1.4.1.4 - C ko:K00262 ko00220,ko00250,ko00910,ko01100,map00220,map00250,map00910,map01100 ko00000,ko00001,ko01000 Belongs to the Glu Leu Phe Val dehydrogenases family
PDDFDHOE_04474 4.83e-30 - - - - - - - -
PDDFDHOE_04475 0.0 maeB 1.1.1.38, 1.1.1.40 - C ko:K00027,ko:K00029 ko00620,ko00710,ko01100,ko01120,ko01200,ko02020,map00620,map00710,map01100,map01120,map01200,map02020 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score
PDDFDHOE_04476 3.89e-207 thiD 2.7.1.49, 2.7.4.7 - K ko:K00941 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko00002,ko01000 transcriptional regulator (AraC family)
PDDFDHOE_04477 3.48e-253 - - - M ko:K03585 ko01501,ko01503,map01501,map01503 ko00000,ko00001,ko00002,ko01504,ko02000,ko03036 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PDDFDHOE_04478 0.0 - - - V ko:K03296 - ko00000 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PDDFDHOE_04479 3.68e-311 - - - MU - - - Efflux transporter, outer membrane factor lipoprotein, NodT family
PDDFDHOE_04480 1.16e-132 - - - K - - - Bacterial regulatory proteins, tetR family
PDDFDHOE_04481 1.55e-168 - - - K - - - transcriptional regulator
PDDFDHOE_04482 2.68e-226 - - - L - - - Belongs to the 'phage' integrase family
PDDFDHOE_04483 2.27e-117 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_04484 3e-113 - - - C - - - Putative TM nitroreductase
PDDFDHOE_04485 5.82e-57 - - - V - - - Protein conserved in bacteria
PDDFDHOE_04486 0.000551 - - - - - - - -
PDDFDHOE_04487 2.27e-63 - - - S - - - Sulfatase-modifying factor enzyme 1
PDDFDHOE_04489 3.99e-14 - - - - - - - -
PDDFDHOE_04490 2.23e-49 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_04491 8.22e-30 - - - - - - - -
PDDFDHOE_04492 1.29e-51 - - - K - - - PFAM pyridoxamine 5'-phosphate
PDDFDHOE_04494 0.0 - 5.99.1.2 - L ko:K03169 - ko00000,ko01000,ko03032 COG0550 Topoisomerase IA
PDDFDHOE_04495 2.86e-37 - - - S - - - Protein of unknown function (DUF4099)
PDDFDHOE_04496 0.0 - - - S - - - COG NOG09947 non supervised orthologous group
PDDFDHOE_04498 8.85e-162 - - - K - - - AbiEi antitoxin C-terminal domain
PDDFDHOE_04499 2.86e-175 - - - S - - - Nucleotidyl transferase AbiEii toxin, Type IV TA system
PDDFDHOE_04500 1.68e-56 - - - S - - - Domain of unknown function (DUF4120)
PDDFDHOE_04501 2.58e-79 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_04502 8.42e-30 - - - - - - - -
PDDFDHOE_04503 2.57e-35 - - - - - - - -
PDDFDHOE_04504 2.85e-105 - - - S - - - Domain of unknown function (DUF4326)
PDDFDHOE_04505 4.4e-180 - - - U - - - Psort location CytoplasmicMembrane, score
PDDFDHOE_04506 0.0 - - - L - - - COG COG3344 Retron-type reverse transcriptase
PDDFDHOE_04507 7.77e-260 mnmA 2.8.1.13 - J ko:K00566 ko04122,map04122 ko00000,ko00001,ko01000,ko03016 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
PDDFDHOE_04508 0.0 aprN - - M - - - Belongs to the peptidase S8 family
PDDFDHOE_04509 4.71e-283 xseA 3.1.11.6 - L ko:K03601 ko03430,map03430 ko00000,ko00001,ko01000,ko03400 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PDDFDHOE_04510 7.52e-36 xseB 3.1.11.6 - L ko:K03602 ko03430,map03430 ko00000,ko00001,ko01000,ko03400 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PDDFDHOE_04511 5.64e-256 ilvE 2.6.1.42 - EH ko:K00826 ko00270,ko00280,ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00270,map00280,map00290,map00770,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 COG0115 Branched-chain amino acid aminotransferase 4-amino-4-deoxychorismate lyase
PDDFDHOE_04512 1.63e-139 - - - S - - - Protein of unknown function (DUF975)
PDDFDHOE_04513 2.44e-209 trmB 2.1.1.33 - J ko:K03439 - ko00000,ko01000,ko03016 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
PDDFDHOE_04514 9.83e-259 mrp - - D ko:K03593 - ko00000,ko03029,ko03036 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP
PDDFDHOE_04515 0.0 - - - CO - - - COG NOG24773 non supervised orthologous group
PDDFDHOE_04516 0.0 - - - U - - - Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
PDDFDHOE_04517 8.58e-82 - - - K - - - Transcriptional regulator
PDDFDHOE_04519 3.09e-132 - - - M - - - COG NOG19089 non supervised orthologous group
PDDFDHOE_04520 2e-301 - - - V ko:K01992 - ko00000,ko00002,ko02000 Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_04521 4.89e-282 - - - CP ko:K01992 - ko00000,ko00002,ko02000 Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_04522 1.46e-217 - - - M ko:K01993 - ko00000 Auxiliary transport protein, membrane fusion protein (MFP) family protein
PDDFDHOE_04523 0.0 - - - MU - - - Psort location OuterMembrane, score
PDDFDHOE_04524 1.11e-196 - - - G - - - Domain of unknown function (DUF3473)
PDDFDHOE_04525 0.0 msbA - - V ko:K06147,ko:K11085 ko02010,map02010 ko00000,ko00001,ko01000,ko02000 COG1132 ABC-type multidrug transport system, ATPase and permease components
PDDFDHOE_04526 0.0 - - - S - - - P-loop ATPase and inactivated derivatives
PDDFDHOE_04527 7.85e-145 - - - L - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_04528 0.0 - - - - - - - -
PDDFDHOE_04529 1.45e-79 - - - - - - - -
PDDFDHOE_04530 0.0 - - - - - - - -
PDDFDHOE_04531 5.89e-313 - - - - - - - -
PDDFDHOE_04532 5.4e-224 - - GT2 M ko:K20534 - ko00000,ko01000,ko01005,ko02000 Glycosyltransferase, group 2 family protein
PDDFDHOE_04533 6.66e-77 - - - S - - - Psort location CytoplasmicMembrane, score 9.46
PDDFDHOE_04534 2.83e-236 - - - S - - - Core-2/I-Branching enzyme
PDDFDHOE_04535 4.08e-271 vioA 2.6.1.33 - E ko:K20429 - ko00000,ko01000 Belongs to the DegT DnrJ EryC1 family
PDDFDHOE_04536 1.06e-277 - - - E ko:K10907 - ko00000,ko01000,ko01007 Aminotransferase class-V
PDDFDHOE_04537 2.97e-288 - - - F - - - ATP-grasp domain
PDDFDHOE_04538 4.28e-224 lacX - - G - - - COG COG2017 Galactose mutarotase and related enzymes
PDDFDHOE_04539 0.0 sacC 3.2.1.80 - G ko:K03332 ko00051,map00051 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 32 family
PDDFDHOE_04540 0.0 - - - S - - - TROVE domain
PDDFDHOE_04541 9.99e-246 - - - K - - - WYL domain
PDDFDHOE_04542 0.0 - - - G - - - Belongs to the glycosyl hydrolase 2 family
PDDFDHOE_04543 0.0 - - - G - - - cog cog3537
PDDFDHOE_04544 0.0 - - - T - - - COG NOG26059 non supervised orthologous group
PDDFDHOE_04545 1.64e-203 - - - - - - - -
PDDFDHOE_04546 7.17e-171 - - - - - - - -
PDDFDHOE_04547 3.25e-106 rpiB 5.3.1.6 - G ko:K01808 ko00030,ko00051,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00051,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Ribose 5-phosphate isomerase
PDDFDHOE_04548 0.0 tkt 2.2.1.1 - H ko:K00615 ko00030,ko00710,ko01051,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01051,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the transketolase family
PDDFDHOE_04549 0.0 abf2 3.2.1.55 GH51 G ko:K01209 ko00520,map00520 ko00000,ko00001,ko01000 Alpha-L-arabinofuranosidase domain protein
PDDFDHOE_04550 0.0 - - - D ko:K09955 - ko00000 protein conserved in bacteria
PDDFDHOE_04551 0.0 araB - - G - - - Carbohydrate kinase, FGGY family protein
PDDFDHOE_04552 0.0 araA 5.3.1.4 - G ko:K01804 ko00040,ko01100,map00040,map01100 ko00000,ko00001,ko01000 Catalyzes the conversion of L-arabinose to L-ribulose
PDDFDHOE_04553 9.6e-73 - - - S - - - 23S rRNA-intervening sequence protein
PDDFDHOE_04554 1.99e-168 araD 5.1.3.4 - G ko:K03077 ko00040,ko00053,ko01100,ko01120,map00040,map00053,map01100,map01120 ko00000,ko00001,ko00002,ko01000 COG COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases
PDDFDHOE_04555 3.04e-162 - - - F - - - Hydrolase, NUDIX family
PDDFDHOE_04556 0.0 - - - S ko:K03307 - ko00000 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
PDDFDHOE_04557 5.69e-283 galM 5.1.3.3 - G ko:K01785 ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130 ko00000,ko00001,ko00002,ko01000 Converts alpha-aldose to the beta-anomer
PDDFDHOE_04558 4.68e-109 - - - E - - - Appr-1-p processing protein
PDDFDHOE_04559 1.32e-62 - - - S - - - Protein of unknown function (DUF2089)
PDDFDHOE_04560 1.17e-137 - - - - - - - -
PDDFDHOE_04561 7.75e-313 creD - - V ko:K06143 - ko00000 COG COG4452 Inner membrane protein involved in colicin E2 resistance
PDDFDHOE_04562 5.33e-63 - - - K - - - Winged helix DNA-binding domain
PDDFDHOE_04563 3.31e-120 - - - Q - - - membrane
PDDFDHOE_04564 1.17e-96 - - - K - - - helix_turn_helix multiple antibiotic resistance protein
PDDFDHOE_04565 3.47e-303 - - - MU - - - Psort location OuterMembrane, score
PDDFDHOE_04566 1.1e-226 - - - V ko:K03543 - ko00000,ko00002,ko02000 Auxiliary transport protein, membrane fusion protein (MFP) family protein
PDDFDHOE_04567 0.0 - - - EGP - - - Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_04568 0.0 - - - P - - - TonB-dependent Receptor Plug Domain
PDDFDHOE_04569 0.0 uxaA 4.2.1.42, 4.2.1.7 - G ko:K01685,ko:K01708 ko00040,ko00053,ko01100,map00040,map00053,map01100 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score 8.96
PDDFDHOE_04570 1.98e-259 - - - K ko:K02529 - ko00000,ko03000 Psort location Cytoplasmic, score
PDDFDHOE_04571 1.95e-248 - 2.7.1.45 - G ko:K00874 ko00030,ko01100,ko01120,ko01200,map00030,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Kinase, PfkB family
PDDFDHOE_04572 7.79e-164 eda 4.1.2.14, 4.1.3.42 - G ko:K01625 ko00030,ko00630,ko01100,ko01120,ko01200,map00030,map00630,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 KDPG and KHG aldolase
PDDFDHOE_04574 8.4e-51 - - - - - - - -
PDDFDHOE_04575 1.76e-68 - - - S - - - Conserved protein
PDDFDHOE_04576 2.6e-135 - - - U - - - Psort location CytoplasmicMembrane, score 9.46
PDDFDHOE_04577 6.31e-159 - - - S - - - Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_04578 0.0 cobN 6.6.1.2 - H ko:K02230 ko00860,ko01100,map00860,map01100 ko00000,ko00001,ko01000 COG1429 Cobalamin biosynthesis protein CobN and related
PDDFDHOE_04579 0.0 hmuR - - P ko:K16089 - ko00000,ko02000 COG4771 Outer membrane receptor for ferrienterochelin and colicins
PDDFDHOE_04580 2.82e-160 - - - S - - - HmuY protein
PDDFDHOE_04581 9.57e-194 - - - S - - - Calycin-like beta-barrel domain
PDDFDHOE_04582 4.36e-208 czcD - - P ko:K16264 - ko00000,ko02000 cation diffusion facilitator family transporter
PDDFDHOE_04583 0.0 - - - P ko:K07085 - ko00000 Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_04584 0.0 - - - P ko:K16089 - ko00000,ko02000 COG4771 Outer membrane receptor for ferrienterochelin and colicins
PDDFDHOE_04585 4.67e-71 - - - - - - - -
PDDFDHOE_04586 0.0 - - - P ko:K16089 - ko00000,ko02000 COG4771 Outer membrane receptor for ferrienterochelin and colicins
PDDFDHOE_04587 3.95e-138 - - - S - - - Bacteriocin-protection, YdeI or OmpD-Associated
PDDFDHOE_04588 0.0 - 3.2.1.52 GH20 G ko:K12373 ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142 ko00000,ko00001,ko00002,ko01000,ko03110 Glycosyl hydrolase family 20, catalytic domain
PDDFDHOE_04589 2.65e-71 - - - K - - - Bacterial regulatory proteins, tetR family
PDDFDHOE_04590 1.57e-162 - - - V ko:K06147 - ko00000,ko02000 COG1132 ABC-type multidrug transport system, ATPase and permease components
PDDFDHOE_04591 1.39e-281 - - - C - - - radical SAM domain protein
PDDFDHOE_04592 5.56e-104 - - - - - - - -
PDDFDHOE_04593 1e-131 - - - - - - - -
PDDFDHOE_04594 2.48e-96 - - - - - - - -
PDDFDHOE_04595 1.37e-249 - - - - - - - -
PDDFDHOE_04596 1.87e-246 - 1.8.5.2 - S ko:K16936,ko:K16937 ko00920,ko01120,map00920,map01120 ko00000,ko00001,ko01000 TQO small subunit DoxD
PDDFDHOE_04597 4.1e-84 - - - S - - - Protein of unknown function (DUF2023)
PDDFDHOE_04598 1.36e-121 fldA - - C ko:K03839 - ko00000 Low-potential electron donor to a number of redox enzymes
PDDFDHOE_04599 9.98e-290 purH2 2.1.2.3, 3.5.4.10 - F ko:K00602 ko00230,ko00670,ko01100,ko01110,ko01130,ko01523,map00230,map00670,map01100,map01110,map01130,map01523 ko00000,ko00001,ko00002,ko01000,ko04147 COG0138 AICAR transformylase IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful)
PDDFDHOE_04600 8.38e-169 - - - D ko:K07322 - ko00000 Hemerythrin HHE cation binding domain protein
PDDFDHOE_04601 1.51e-133 - - - K - - - Psort location Cytoplasmic, score 8.96
PDDFDHOE_04602 2.62e-145 - - - S - - - Psort location Cytoplasmic, score 9.26
PDDFDHOE_04603 7.29e-214 - - - M - - - probably involved in cell wall biogenesis
PDDFDHOE_04604 8.32e-243 - - - M - - - COG COG2148 Sugar transferases involved in lipopolysaccharide synthesis
PDDFDHOE_04605 3.5e-81 - - - T - - - COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PDDFDHOE_04607 0.0 - - - S - - - COG NOG06028 non supervised orthologous group
PDDFDHOE_04608 4.14e-257 ansA 3.5.1.1 - EJ ko:K01424 ko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110 ko00000,ko00001,ko01000 L-asparaginase, type I
PDDFDHOE_04609 3.84e-185 trpA 4.2.1.20 - E ko:K01695 ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
PDDFDHOE_04610 6.21e-153 trpF 5.3.1.24 - E ko:K01817 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the TrpF family
PDDFDHOE_04611 4.96e-174 trpC 4.1.1.48 - E ko:K01609 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the TrpC family
PDDFDHOE_04612 5.91e-234 trpD 2.4.2.18, 4.1.3.27 - F ko:K00766,ko:K13497 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
PDDFDHOE_04613 9.29e-132 trpG 2.6.1.85, 4.1.3.27 - EH ko:K01658,ko:K01664 ko00400,ko00405,ko00790,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00400,map00405,map00790,map01100,map01110,map01130,map01230,map02024,map02025 ko00000,ko00001,ko00002,ko01000 Glutamine amidotransferase, class I
PDDFDHOE_04614 0.0 trpE 4.1.3.27 - EH ko:K01657 ko00400,ko00405,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00400,map00405,map01100,map01110,map01130,map01230,map02024,map02025 ko00000,ko00001,ko00002,ko01000 Anthranilate synthase component I
PDDFDHOE_04615 2.44e-287 trpB 4.2.1.20, 5.3.1.24 - E ko:K01696,ko:K01817 ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
PDDFDHOE_04616 9.06e-21 - - - - - - - -
PDDFDHOE_04617 1.02e-277 yqhD - - C ko:K08325 ko00640,map00640 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score
PDDFDHOE_04618 1.76e-316 - - - T - - - His Kinase A (phosphoacceptor) domain
PDDFDHOE_04619 0.0 - - - P - - - Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_04620 5.09e-210 ppx 3.6.1.11, 3.6.1.40 - FP ko:K01524 ko00230,map00230 ko00000,ko00001,ko01000 Ppx GppA phosphatase family
PDDFDHOE_04621 0.0 ppk 2.7.4.1 - H ko:K00937 ko00190,ko03018,map00190,map03018 ko00000,ko00001,ko01000,ko03019 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
PDDFDHOE_04622 2.44e-129 - - - S - - - Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_04623 0.0 glnA 6.3.1.2 - S ko:K01915 ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727 ko00000,ko00001,ko01000,ko04147 Glutamate--ammonia ligase, catalytic domain protein
PDDFDHOE_04624 0.0 amt - - P ko:K03320 - ko00000,ko02000 Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_04625 8.69e-76 glnB - - K ko:K04751 ko02020,map02020 ko00000,ko00001 Belongs to the P(II) protein family
PDDFDHOE_04626 2.31e-174 - - - S - - - Psort location OuterMembrane, score
PDDFDHOE_04627 7.33e-313 dapL 2.6.1.83 - H ko:K10206 ko00300,ko01100,ko01110,ko01130,ko01230,map00300,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL-diaminopimelate
PDDFDHOE_04628 2.33e-196 dapF 5.1.1.7 - E ko:K01778 ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
PDDFDHOE_04629 4.04e-67 - - - CO ko:K03671 ko04621,ko05418,map04621,map05418 ko00000,ko00001,ko03110 Thioredoxin
PDDFDHOE_04630 6.35e-174 - 3.1.4.46 - C ko:K01126 ko00564,map00564 ko00000,ko00001,ko01000 glycerophosphoryl diester phosphodiesterase
PDDFDHOE_04631 0.0 asnB 6.3.5.4 - E ko:K01953 ko00250,ko01100,ko01110,map00250,map01100,map01110 ko00000,ko00001,ko01000,ko01002 Asparagine synthase, glutamine-hydrolyzing
PDDFDHOE_04632 0.0 gltD 1.4.1.13, 1.4.1.14 - E ko:K00266 ko00250,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00250,map00910,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko01000 COG0493 NADPH-dependent glutamate synthase beta chain and related
PDDFDHOE_04633 0.0 gltB 1.4.1.13, 1.4.1.14, 1.4.7.1 - E ko:K00265,ko:K00284 ko00250,ko00630,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00250,map00630,map00910,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko01000 Class II glutamine amidotransferase
PDDFDHOE_04634 0.0 glmS 2.6.1.16 - M ko:K00820 ko00250,ko00520,ko01100,ko01130,ko04931,map00250,map00520,map01100,map01130,map04931 ko00000,ko00001,ko01000,ko01002 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
PDDFDHOE_04635 0.0 purF 2.4.2.14 - F ko:K00764 ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000,ko01002 Psort location Cytoplasmic, score 8.96
PDDFDHOE_04636 4.02e-283 carA 6.3.5.5 - F ko:K01956 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the CarA family
PDDFDHOE_04637 0.0 carB 6.3.5.5 - F ko:K01955 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ)
PDDFDHOE_04638 2.15e-261 manC 2.7.7.13 - M ko:K00971 ko00051,ko00520,ko01100,ko01110,map00051,map00520,map01100,map01110 ko00000,ko00001,ko00002,ko01000 mannose-1-phosphate guanylyltransferase
PDDFDHOE_04639 1.12e-209 - - - K - - - transcriptional regulator (AraC family)
PDDFDHOE_04640 7.98e-284 - - - MU - - - COG NOG26656 non supervised orthologous group
PDDFDHOE_04641 1.29e-207 - - - M ko:K01993 - ko00000 COG COG0845 Membrane-fusion protein
PDDFDHOE_04642 0.0 - - - G ko:K01990 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
PDDFDHOE_04643 5.86e-238 ybhS - - V ko:K01992 - ko00000,ko00002,ko02000 Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_04644 8.71e-258 - - - V ko:K01992 - ko00000,ko00002,ko02000 Psort location CytoplasmicMembrane, score 10.00
PDDFDHOE_04645 2.2e-85 hsp20 - - O ko:K13993 ko04141,map04141 ko00000,ko00001,ko03110 Belongs to the small heat shock protein (HSP20) family
PDDFDHOE_04646 2.13e-111 - - - J - - - Threonine alanine tRNA ligase second additional domain protein
PDDFDHOE_04647 9.81e-149 sanA - - S ko:K03748 - ko00000 Psort location CytoplasmicMembrane, score 9.82
PDDFDHOE_04648 3.04e-156 - - - S - - - Domain of unknown function (DUF4919)

eggNOG-mapper v2.1.12 (Database: eggNOG v5.0.2, Mar. 2021 release)