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ORF_ID	e_value	Gene_name	EC_number	CAZy	COGs	KEGG_ko	KEGG_Pathway	BRITE	Description
PAMIGPLM_00001	0.0	-	3.2.1.21	GH3	G	ko:K05349	ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110	ko00000,ko00001,ko01000	Fibronectin type III-like domain
PAMIGPLM_00002	0.0	-	-	-	KLT	-	-	-	Protein tyrosine kinase
PAMIGPLM_00003	1.62e-213	-	-	-	O	-	-	-	Thioredoxin
PAMIGPLM_00005	2.48e-255	rpfB	-	-	S	ko:K21688	-	ko00000	G5
PAMIGPLM_00006	7.35e-221	ksgA	2.1.1.182	-	J	ko:K02528	-	ko00000,ko01000,ko03009	Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
PAMIGPLM_00007	4.39e-214	ispE	2.7.1.148	-	F	ko:K00919	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
PAMIGPLM_00008	8.42e-142	-	-	-	S	-	-	-	LytR cell envelope-related transcriptional attenuator
PAMIGPLM_00009	0.0	pcnA	2.7.7.19, 2.7.7.72	-	J	ko:K00970,ko:K00974	ko03013,ko03018,map03013,map03018	ko00000,ko00001,ko01000,ko03016,ko03019	Probable RNA and SrmB- binding site of polymerase A
PAMIGPLM_00010	6.34e-156	mutT4	-	-	L	-	-	-	Belongs to the Nudix hydrolase family
PAMIGPLM_00011	0.0	-	-	-	M	-	-	-	Conserved repeat domain
PAMIGPLM_00012	0.0	mviN	-	-	KLT	ko:K03980	-	ko00000,ko01011,ko02000	MviN-like protein
PAMIGPLM_00013	0.0	-	-	-	KLT	ko:K03980	-	ko00000,ko01011,ko02000	MviN-like protein
PAMIGPLM_00014	6.29e-17	-	-	-	S	ko:K07133	-	ko00000	Domain of unknown function (DUF4143)
PAMIGPLM_00015	1.85e-156	-	-	-	S	-	-	-	5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C)
PAMIGPLM_00016	5.61e-20	-	-	-	S	-	-	-	Psort location Extracellular, score 8.82
PAMIGPLM_00017	9.86e-231	trxB	1.8.1.9	-	C	ko:K00384	ko00450,map00450	ko00000,ko00001,ko01000	Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
PAMIGPLM_00018	8.92e-280	parB	-	-	K	ko:K03497	-	ko00000,ko03000,ko03036,ko04812	Belongs to the ParB family
PAMIGPLM_00019	1.76e-220	parA	-	-	D	ko:K03496	-	ko00000,ko03036,ko04812	CobQ CobB MinD ParA nucleotide binding domain protein
PAMIGPLM_00020	1.35e-170	rsmG	2.1.1.170	-	J	ko:K03501	-	ko00000,ko01000,ko03009,ko03036	Specifically methylates the N7 position of a guanine in 16S rRNA
PAMIGPLM_00021	1.06e-117	jag	-	-	S	ko:K06346	-	ko00000	Putative single-stranded nucleic acids-binding domain
PAMIGPLM_00022	2.26e-244	yidC	-	-	U	ko:K03217	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044,ko03029	Membrane protein insertase, YidC Oxa1 family
PAMIGPLM_00023	2.68e-19	rpmH	-	-	J	ko:K02914	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL34 family
PAMIGPLM_00024	0.0	dnaA	-	-	L	ko:K02313	ko02020,ko04112,map02020,map04112	ko00000,ko00001,ko03032,ko03036	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
PAMIGPLM_00025	7.34e-259	dnaN	2.7.7.7	-	L	ko:K02338	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
PAMIGPLM_00026	1.35e-299	recF	-	-	L	ko:K03629	ko03440,map03440	ko00000,ko00001,ko03400	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
PAMIGPLM_00027	1.01e-115	-	-	-	S	-	-	-	Protein of unknown function (DUF721)
PAMIGPLM_00028	0.0	gyrB	5.99.1.3	-	L	ko:K02470	-	ko00000,ko01000,ko03032,ko03400	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PAMIGPLM_00029	0.0	gyrA	5.99.1.3	-	L	ko:K02469	-	ko00000,ko01000,ko03032,ko03400	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PAMIGPLM_00030	5.13e-106	-	-	-	S	-	-	-	Transmembrane domain of unknown function (DUF3566)
PAMIGPLM_00031	0.0	gdhA	1.4.1.4	-	E	ko:K00262	ko00220,ko00250,ko00910,ko01100,map00220,map00250,map00910,map01100	ko00000,ko00001,ko01000	Belongs to the Glu Leu Phe Val dehydrogenases family
PAMIGPLM_00032	6.35e-97	mscL	-	-	M	ko:K03282	-	ko00000,ko02000	Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
PAMIGPLM_00036	3.41e-142	-	-	-	S	ko:K07043	-	ko00000	Protein of unknown function DUF45
PAMIGPLM_00037	3.29e-239	ldh	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	Belongs to the LDH MDH superfamily
PAMIGPLM_00038	6.78e-306	-	-	-	P	ko:K03699	-	ko00000,ko02042	Transporter associated domain
PAMIGPLM_00039	2.88e-154	cah	4.2.1.1	-	P	ko:K01673	ko00910,map00910	ko00000,ko00001,ko01000	Reversible hydration of carbon dioxide
PAMIGPLM_00040	4.67e-49	-	-	-	-	-	-	-	-
PAMIGPLM_00041	0.0	ppc	4.1.1.31	-	H	ko:K01595	ko00620,ko00680,ko00710,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00710,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
PAMIGPLM_00042	0.0	-	-	-	S	-	-	-	Threonine/Serine exporter, ThrE
PAMIGPLM_00043	0.0	-	-	-	E	ko:K11928	-	ko00000,ko02000	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
PAMIGPLM_00044	6.48e-263	trpS	6.1.1.2	-	J	ko:K01867	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-I aminoacyl-tRNA synthetase family
PAMIGPLM_00045	1.49e-64	-	-	-	S	-	-	-	Protein of unknown function (DUF3073)
PAMIGPLM_00046	1.1e-82	-	-	-	I	-	-	-	Sterol carrier protein
PAMIGPLM_00047	0.0	glgP	2.4.1.1	GT35	G	ko:K00688	ko00500,ko01100,ko01110,ko02026,ko04217,ko04910,ko04922,ko04931,map00500,map01100,map01110,map02026,map04217,map04910,map04922,map04931	ko00000,ko00001,ko01000	Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
PAMIGPLM_00048	3.8e-47	-	-	-	-	-	-	-	-
PAMIGPLM_00049	1.44e-184	gluP	3.4.21.105	-	S	ko:K19225	-	ko00000,ko01000,ko01002	Rhomboid family
PAMIGPLM_00050	1.95e-307	-	-	-	L	-	-	-	ribosomal rna small subunit methyltransferase
PAMIGPLM_00051	2.28e-90	crgA	-	-	D	-	-	-	Involved in cell division
PAMIGPLM_00052	1.12e-182	-	-	-	S	-	-	-	Bacterial protein of unknown function (DUF881)
PAMIGPLM_00053	3.89e-266	srtB	3.4.22.70	-	M	ko:K07284	-	ko00000,ko01000,ko01002,ko01011	Sortase family
PAMIGPLM_00054	2.05e-148	trpG	2.6.1.85, 4.1.3.27	-	EH	ko:K01658,ko:K01664	ko00400,ko00405,ko00790,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00400,map00405,map00790,map01100,map01110,map01130,map01230,map02024,map02025	ko00000,ko00001,ko00002,ko01000	para-aminobenzoate synthase glutamine amidotransferase component II
PAMIGPLM_00055	0.0	pknB	2.7.11.1	-	KLT	ko:K08884,ko:K12132	-	ko00000,ko01000,ko01001	Protein tyrosine kinase
PAMIGPLM_00056	6.1e-227	pknA	2.7.11.1	-	T	ko:K08884,ko:K12132	-	ko00000,ko01000,ko01001	Protein tyrosine kinase
PAMIGPLM_00057	0.0	pbpA	-	-	M	ko:K05364	ko00550,map00550	ko00000,ko00001,ko01011	penicillin-binding protein
PAMIGPLM_00058	0.0	rodA	-	-	D	ko:K03588	ko04112,map04112	ko00000,ko00001,ko02000,ko03036	Belongs to the SEDS family
PAMIGPLM_00059	0.0	pstP	3.1.3.16	-	T	ko:K20074	-	ko00000,ko01000,ko01009	Sigma factor PP2C-like phosphatases
PAMIGPLM_00060	1.54e-99	fhaB	-	-	T	-	-	-	Inner membrane component of T3SS, cytoplasmic domain
PAMIGPLM_00061	2.6e-168	fhaA	-	-	T	-	-	-	Protein of unknown function (DUF2662)
PAMIGPLM_00062	0.0	pepX	3.4.14.5	-	E	ko:K01278	ko04974,map04974	ko00000,ko00001,ko01000,ko01002,ko04090,ko04147	Dipeptidyl peptidase IV (DPP IV) N-terminal region
PAMIGPLM_00063	7.37e-291	-	-	-	T	-	-	-	Histidine kinase
PAMIGPLM_00064	6.6e-147	-	-	-	K	-	-	-	helix_turn_helix, Lux Regulon
PAMIGPLM_00065	9.55e-246	pldB	3.1.1.5	-	I	ko:K01048	ko00564,map00564	ko00000,ko00001,ko01000	Serine aminopeptidase, S33
PAMIGPLM_00066	1.84e-214	-	-	-	EG	-	-	-	EamA-like transporter family
PAMIGPLM_00067	8.46e-111	-	-	-	S	ko:K07118	-	ko00000	NAD(P)H-binding
PAMIGPLM_00068	1.76e-57	-	-	-	K	-	-	-	HxlR-like helix-turn-helix
PAMIGPLM_00073	9.83e-29	-	-	-	K	-	-	-	helix_turn_helix, Lux Regulon
PAMIGPLM_00074	0.0	tgt	2.4.2.29	-	F	ko:K00773	-	ko00000,ko01000,ko03016	Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
PAMIGPLM_00075	0.0	degP	-	-	O	ko:K08372	ko02020,map02020	ko00000,ko00001,ko01000,ko01002	Domain present in PSD-95, Dlg, and ZO-1/2.
PAMIGPLM_00076	0.0	-	3.6.3.4, 3.6.3.54	-	P	ko:K01533,ko:K17686	ko01524,ko04016,map01524,map04016	ko00000,ko00001,ko01000	E1-E2 ATPase
PAMIGPLM_00077	1.3e-239	ansA	3.5.1.1	-	EJ	ko:K01424	ko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110	ko00000,ko00001,ko01000	Asparaginase
PAMIGPLM_00078	0.0	fprA	1.18.1.2, 1.19.1.1	-	C	ko:K00528	-	ko00000,ko01000	Pyridine nucleotide-disulphide oxidoreductase
PAMIGPLM_00079	4.65e-215	htpX	-	-	O	ko:K03799	-	ko00000,ko00002,ko01000,ko01002	Belongs to the peptidase M48B family
PAMIGPLM_00081	8.48e-60	-	-	-	-	-	-	-	-
PAMIGPLM_00082	2.88e-35	-	-	-	-	-	-	-	-
PAMIGPLM_00083	0.0	hsdM	2.1.1.72	-	V	ko:K03427	-	ko00000,ko01000,ko02048	modification (methylase) protein of type I restriction-modification system K03427
PAMIGPLM_00085	9.68e-169	-	3.1.21.3	-	V	ko:K01154	-	ko00000,ko01000,ko02048	Type I restriction modification DNA specificity domain
PAMIGPLM_00086	1.86e-218	-	-	-	V	-	-	-	Abi-like protein
PAMIGPLM_00087	0.0	hsdR	3.1.21.3	-	V	ko:K01153	-	ko00000,ko01000,ko02048	Subunit R is required for both nuclease and ATPase activities, but not for modification
PAMIGPLM_00088	6.19e-38	-	-	-	S	-	-	-	Bacterial mobilisation protein (MobC)
PAMIGPLM_00089	9.37e-101	-	-	-	U	-	-	-	Relaxase/Mobilisation nuclease domain
PAMIGPLM_00091	3.26e-238	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
PAMIGPLM_00092	2.86e-218	-	-	-	EG	-	-	-	EamA-like transporter family
PAMIGPLM_00093	0.0	-	-	-	S	ko:K01421	-	ko00000	YhgE Pip domain protein
PAMIGPLM_00094	0.0	-	-	-	S	ko:K01421	-	ko00000	YhgE Pip domain protein
PAMIGPLM_00095	2.85e-276	fbaA	4.1.2.13	-	G	ko:K01624	ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Fructose-bisphosphate aldolase class-II
PAMIGPLM_00096	9.01e-314	purA	6.3.4.4	-	F	ko:K01939	ko00230,ko00250,ko01100,map00230,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
PAMIGPLM_00097	0.0	-	-	-	P	ko:K03281	-	ko00000	Voltage gated chloride channel
PAMIGPLM_00098	6.24e-198	crcB	-	-	U	ko:K06199	-	ko00000,ko02000	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PAMIGPLM_00099	5.18e-81	crcB	-	-	U	ko:K06199	-	ko00000,ko02000	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PAMIGPLM_00100	4.02e-40	livK	-	-	E	ko:K01999	ko02010,ko02024,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Receptor family ligand binding region
PAMIGPLM_00101	2.27e-248	-	-	-	K	ko:K03484	-	ko00000,ko03000	helix_turn _helix lactose operon repressor
PAMIGPLM_00102	0.0	gtfA	2.4.1.7	GH13	G	ko:K00690	ko00500,map00500	ko00000,ko00001,ko01000	Domain of unknown function (DUF1964)
PAMIGPLM_00103	1.89e-148	-	-	-	S	-	-	-	Protein of unknown function, DUF624
PAMIGPLM_00104	0.0	-	2.4.1.4, 3.2.1.1, 3.2.1.20, 5.4.99.16	GH13,GH31	G	ko:K01187,ko:K05341,ko:K05343	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Alpha-amylase domain
PAMIGPLM_00105	6.08e-312	-	-	-	G	ko:K10117	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding protein
PAMIGPLM_00106	4.35e-210	-	-	-	P	ko:K10118	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PAMIGPLM_00107	2.58e-193	-	-	-	P	ko:K02026,ko:K10119	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PAMIGPLM_00108	0.0	scrT	-	-	G	-	-	-	Transporter major facilitator family protein
PAMIGPLM_00109	0.0	-	-	-	EGP	-	-	-	Sugar (and other) transporter
PAMIGPLM_00110	2.65e-259	ilvC	1.1.1.86	-	H	ko:K00053	ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
PAMIGPLM_00111	5.04e-258	ilvC	1.1.1.86	-	H	ko:K00053	ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
PAMIGPLM_00112	0.0	-	3.1.1.53	-	E	ko:K05970	-	ko00000,ko01000	Carbohydrate esterase, sialic acid-specific acetylesterase
PAMIGPLM_00113	3.47e-54	-	3.2.1.25	-	G	ko:K01192	ko00511,ko04142,map00511,map04142	ko00000,ko00001,ko01000	beta-mannosidase
PAMIGPLM_00114	1.25e-241	-	-	-	K	-	-	-	helix_turn _helix lactose operon repressor
PAMIGPLM_00115	4.62e-15	-	-	-	S	-	-	-	Protein of unknown function, DUF624
PAMIGPLM_00116	0.0	aroP	-	-	E	ko:K03293,ko:K11732	-	ko00000,ko02000	aromatic amino acid transport protein AroP K03293
PAMIGPLM_00117	0.0	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	FtsX-like permease family
PAMIGPLM_00118	3.48e-310	-	-	-	P	-	-	-	Sodium/hydrogen exchanger family
PAMIGPLM_00119	1.4e-100	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.87
PAMIGPLM_00120	1.97e-239	-	3.4.22.70	-	M	ko:K07284	-	ko00000,ko01000,ko01002,ko01011	Sortase family
PAMIGPLM_00121	2.11e-133	-	-	-	Q	-	-	-	von Willebrand factor (vWF) type A domain
PAMIGPLM_00122	4.48e-290	-	-	-	M	-	-	-	LPXTG cell wall anchor motif
PAMIGPLM_00123	1.65e-103	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.87
PAMIGPLM_00124	0.0	-	-	-	E	ko:K03293	-	ko00000	Amino acid permease
PAMIGPLM_00125	1.79e-214	thiG	2.8.1.10	-	H	ko:K03149	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000	Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S
PAMIGPLM_00126	5.02e-167	thiF	2.7.7.73	-	H	ko:K03148	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000	ThiF family
PAMIGPLM_00127	5.22e-37	thiS	-	-	H	ko:K03154	ko04122,map04122	ko00000,ko00001	ThiS family
PAMIGPLM_00128	1.31e-196	-	-	-	C	-	-	-	Aldo/keto reductase family
PAMIGPLM_00129	3.21e-75	-	-	-	K	-	-	-	helix_turn_helix multiple antibiotic resistance protein
PAMIGPLM_00130	0.0	-	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter, ATP-binding protein
PAMIGPLM_00131	0.0	-	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter transmembrane region
PAMIGPLM_00132	1.35e-147	-	2.7.1.180	-	H	ko:K03734	-	ko00000,ko01000	Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
PAMIGPLM_00133	3.31e-302	-	-	-	G	-	-	-	MFS/sugar transport protein
PAMIGPLM_00134	0.0	-	-	-	P	ko:K07243	-	ko00000,ko02000	Iron permease FTR1 family
PAMIGPLM_00135	7.78e-133	-	-	-	P	ko:K07230	-	ko00000,ko02000	Fe2+ transport protein
PAMIGPLM_00136	3.81e-292	-	-	-	S	-	-	-	Predicted membrane protein (DUF2318)
PAMIGPLM_00137	1.4e-286	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter permease
PAMIGPLM_00139	1.1e-266	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	FtsX-like permease family
PAMIGPLM_00140	1.69e-192	-	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PAMIGPLM_00141	4.79e-103	-	-	-	S	-	-	-	FMN_bind
PAMIGPLM_00142	5.54e-120	-	-	-	K	-	-	-	Psort location Cytoplasmic, score 8.87
PAMIGPLM_00143	0.0	-	-	-	S	ko:K01421	-	ko00000	YhgE Pip domain protein
PAMIGPLM_00144	0.0	-	-	-	S	ko:K01421	-	ko00000	YhgE Pip domain protein
PAMIGPLM_00145	8.57e-289	-	-	-	S	-	-	-	Putative ABC-transporter type IV
PAMIGPLM_00146	2.38e-50	nrdH	-	-	O	ko:K06191	-	ko00000	Glutaredoxin
PAMIGPLM_00147	0.0	-	-	-	M	-	-	-	cell wall binding repeat
PAMIGPLM_00148	3.57e-28	-	-	-	-	-	-	-	-
PAMIGPLM_00149	6.18e-102	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
PAMIGPLM_00150	3.39e-60	-	-	-	L	ko:K07483	-	ko00000	Psort location Cytoplasmic, score 8.87
PAMIGPLM_00151	1.29e-162	-	-	-	L	ko:K07483	-	ko00000	Integrase core domain
PAMIGPLM_00152	5.79e-43	-	-	-	S	-	-	-	Putative ABC-transporter type IV
PAMIGPLM_00154	0.0	kdpA	3.6.3.12	-	P	ko:K01546	ko02020,map02020	ko00000,ko00001,ko01000	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
PAMIGPLM_00155	0.0	kdpB	3.6.3.12	-	P	ko:K01547	ko02020,map02020	ko00000,ko00001,ko01000	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
PAMIGPLM_00156	1.36e-89	kdpC	3.6.3.12	-	P	ko:K01548	ko02020,map02020	ko00000,ko00001,ko01000	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
PAMIGPLM_00157	0.0	kdpD	2.7.13.3	-	T	ko:K07646	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Osmosensitive K+ channel His kinase sensor domain
PAMIGPLM_00158	2.73e-136	kdpE	-	-	KT	ko:K02483,ko:K07667	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko02022	Transcriptional regulatory protein, C terminal
PAMIGPLM_00159	5.23e-45	nrdH	-	-	O	ko:K06191	-	ko00000	Glutaredoxin
PAMIGPLM_00161	0.0	-	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Peptidase family C69
PAMIGPLM_00162	3.23e-248	-	2.7.8.12	-	M	ko:K09809	-	ko00000,ko01000	Glycosyltransferase like family 2
PAMIGPLM_00163	1.89e-149	icaR	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PAMIGPLM_00164	5.82e-251	ftsY	-	-	U	ko:K03110	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
PAMIGPLM_00165	1.45e-302	amt	-	-	U	ko:K03320	-	ko00000,ko02000	Ammonium Transporter Family
PAMIGPLM_00166	2.56e-72	glnB	-	-	K	ko:K04751	ko02020,map02020	ko00000,ko00001	Nitrogen regulatory protein P-II
PAMIGPLM_00167	0.0	glnD	2.7.7.59	-	O	ko:K00990	ko02020,map02020	ko00000,ko00001,ko01000	Nucleotidyltransferase domain
PAMIGPLM_00169	0.0	dnaB	3.6.4.12	-	L	ko:K02314	ko03030,ko04112,map03030,map04112	ko00000,ko00001,ko01000,ko03032	Participates in initiation and elongation during chromosome replication
PAMIGPLM_00170	0.0	murE	-	-	M	-	-	-	Domain of unknown function (DUF1727)
PAMIGPLM_00171	1.14e-175	cobQ2	-	-	S	ko:K07009	-	ko00000	CobB/CobQ-like glutamine amidotransferase domain
PAMIGPLM_00172	1.77e-36	-	-	-	S	-	-	-	granule-associated protein
PAMIGPLM_00173	0.0	-	-	-	S	ko:K03688	-	ko00000	ABC1 family
PAMIGPLM_00174	1.6e-246	-	-	-	K	ko:K02529	-	ko00000,ko03000	Periplasmic binding protein domain
PAMIGPLM_00175	5.38e-316	-	-	-	G	ko:K02027	-	ko00000,ko00002,ko02000	Bacterial extracellular solute-binding protein
PAMIGPLM_00177	5.95e-214	-	-	-	P	ko:K02025,ko:K10189	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PAMIGPLM_00178	3.39e-187	-	-	-	G	ko:K02026	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PAMIGPLM_00179	0.0	-	3.2.1.185	GH127	S	ko:K09955,ko:K18205	-	ko00000,ko01000	Beta-L-arabinofuranosidase, GH127
PAMIGPLM_00180	0.0	-	3.2.1.187	GH121	DG	ko:K18206	-	ko00000,ko01000	Bacterial Ig-like domain (group 4)
PAMIGPLM_00181	0.0	-	-	-	G	-	-	-	Bacterial Ig-like domain (group 4)
PAMIGPLM_00182	1.14e-263	glpQ	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	Glycerophosphoryl diester phosphodiesterase family
PAMIGPLM_00183	1.64e-151	upp	2.4.2.9	-	F	ko:K00761	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
PAMIGPLM_00184	8.12e-134	-	-	-	-	-	-	-	-
PAMIGPLM_00185	1.08e-287	mutT	3.6.1.55	-	LT	ko:K03574	-	ko00000,ko01000,ko03400	Phosphoglycerate mutase family
PAMIGPLM_00186	0.0	ppk	2.7.4.1	-	P	ko:K00937	ko00190,ko03018,map00190,map03018	ko00000,ko00001,ko01000,ko03019	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
PAMIGPLM_00188	6.13e-182	-	-	-	D	-	-	-	bacterial-type flagellum organization
PAMIGPLM_00189	7.23e-238	cpaF	-	-	U	ko:K02283	-	ko00000,ko02035,ko02044	Type II IV secretion system protein
PAMIGPLM_00190	4.2e-171	-	-	-	U	ko:K12510	-	ko00000,ko02044	Type ii secretion system
PAMIGPLM_00191	1.7e-118	-	-	-	NU	-	-	-	Type II secretion system (T2SS), protein F
PAMIGPLM_00192	3.15e-56	-	-	-	S	-	-	-	Protein of unknown function (DUF4244)
PAMIGPLM_00193	1.8e-79	-	-	-	U	-	-	-	TadE-like protein
PAMIGPLM_00194	5.58e-72	-	-	-	S	-	-	-	TIGRFAM helicase secretion neighborhood TadE-like protein
PAMIGPLM_00195	1.19e-277	-	2.7.1.107	-	I	ko:K07029	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko01000	Diacylglycerol kinase catalytic domain protein
PAMIGPLM_00196	1.87e-248	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
PAMIGPLM_00197	1.57e-128	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PAMIGPLM_00198	0.0	dnaX	2.7.7.7	-	L	ko:K02343	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III subunit gamma tau
PAMIGPLM_00199	6.41e-136	recR	-	-	L	ko:K06187	ko03440,map03440	ko00000,ko00001,ko03400	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
PAMIGPLM_00200	7.1e-175	ask	2.7.2.4	-	E	ko:K00928	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Amino acid kinase family
PAMIGPLM_00201	1.17e-125	ask	2.7.2.4	-	E	ko:K00928	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	ACT domain
PAMIGPLM_00202	6.98e-265	asd	1.2.1.11	-	E	ko:K00133	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
PAMIGPLM_00203	0.0	-	-	-	G	-	-	-	lipolytic protein G-D-S-L family
PAMIGPLM_00204	0.0	-	3.2.1.22	-	G	ko:K07407	ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603	ko00000,ko00001,ko01000	Psort location Cytoplasmic, score 8.87
PAMIGPLM_00205	1.33e-295	-	-	-	G	ko:K10117	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding protein
PAMIGPLM_00206	2.63e-198	-	-	-	G	ko:K02025,ko:K10118	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PAMIGPLM_00207	1.9e-77	-	-	-	G	ko:K10119	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PAMIGPLM_00208	2.42e-90	-	-	-	G	ko:K10119	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PAMIGPLM_00209	1.72e-200	-	-	-	K	-	-	-	Periplasmic binding protein domain
PAMIGPLM_00210	4.35e-59	-	-	-	S	-	-	-	Acetyltransferase (GNAT) domain
PAMIGPLM_00211	5.84e-33	-	-	-	S	-	-	-	Protein of unknown function (DUF1778)
PAMIGPLM_00213	4.33e-50	-	-	-	K	-	-	-	helix_turn_helix, Lux Regulon
PAMIGPLM_00214	1.34e-53	-	-	-	-	-	-	-	-
PAMIGPLM_00215	8.81e-148	-	-	-	-	-	-	-	-
PAMIGPLM_00216	0.0	-	-	-	S	-	-	-	Calcineurin-like phosphoesterase
PAMIGPLM_00217	0.0	leuA	2.3.3.13	-	E	ko:K01649	ko00290,ko00620,ko01100,ko01110,ko01210,ko01230,map00290,map00620,map01100,map01110,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
PAMIGPLM_00218	0.0	-	3.2.1.99	GH43	G	ko:K06113	-	ko00000,ko01000	C-terminal of Glycosyl hydrolases family 43
PAMIGPLM_00219	0.0	-	3.2.1.99	GH43	G	ko:K06113	-	ko00000,ko01000	C-terminal of Glycosyl hydrolases family 43
PAMIGPLM_00220	0.0	-	-	-	G	-	-	-	Glycosyl hydrolases family 43
PAMIGPLM_00221	2.67e-250	-	-	-	K	-	-	-	helix_turn _helix lactose operon repressor
PAMIGPLM_00222	3.82e-258	-	-	-	G	-	-	-	Glycosyl hydrolases family 43
PAMIGPLM_00223	0.0	-	-	-	G	ko:K02027	-	ko00000,ko00002,ko02000	Bacterial extracellular solute-binding protein
PAMIGPLM_00224	7.58e-217	-	-	-	G	ko:K02025	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PAMIGPLM_00225	3.71e-206	-	-	-	U	ko:K02026	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PAMIGPLM_00226	0.0	-	-	-	S	ko:K09955	-	ko00000	Beta-L-arabinofuranosidase, GH127
PAMIGPLM_00227	0.0	pbp5	-	-	M	-	-	-	Transglycosylase
PAMIGPLM_00228	1.56e-276	ino1	5.5.1.4	-	I	ko:K01858	ko00521,ko00562,ko01100,ko01130,map00521,map00562,map01100,map01130	ko00000,ko00001,ko01000	Myo-inositol-1-phosphate synthase
PAMIGPLM_00229	2.2e-298	glf	5.4.99.9	-	M	ko:K01854	ko00052,ko00520,map00052,map00520	ko00000,ko00001,ko01000	UDP-galactopyranose mutase
PAMIGPLM_00230	1.78e-244	-	-	-	I	-	-	-	PAP2 superfamily
PAMIGPLM_00231	0.0	topA	5.99.1.2	-	L	ko:K03168	-	ko00000,ko01000,ko03032,ko03400	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
PAMIGPLM_00232	1.49e-145	tmk	2.7.4.9	-	F	ko:K00943	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
PAMIGPLM_00233	1.48e-251	holB	2.7.7.7	-	L	ko:K02341	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III
PAMIGPLM_00234	1.62e-233	-	-	-	K	ko:K02529	-	ko00000,ko03000	helix_turn _helix lactose operon repressor
PAMIGPLM_00235	1.53e-52	hpr	-	-	G	ko:K11189	-	ko00000,ko02000	PTS HPr component phosphorylation site
PAMIGPLM_00236	0.0	ptsI	2.7.3.9	-	G	ko:K08483	ko02060,map02060	ko00000,ko00001,ko01000,ko02000	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
PAMIGPLM_00237	5.02e-139	-	-	-	S	ko:K06910	-	ko00000	Phosphatidylethanolamine-binding protein
PAMIGPLM_00238	0.0	pepD	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Peptidase family C69
PAMIGPLM_00239	0.0	fhs	6.3.4.3	-	F	ko:K01938	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Formate-tetrahydrofolate ligase
PAMIGPLM_00240	2.72e-82	-	-	-	S	-	-	-	Macrophage migration inhibitory factor (MIF)
PAMIGPLM_00241	3.16e-125	-	-	-	S	-	-	-	GtrA-like protein
PAMIGPLM_00242	0.0	-	-	-	EGP	-	-	-	Major Facilitator Superfamily
PAMIGPLM_00243	2.31e-154	-	-	-	G	-	-	-	Phosphoglycerate mutase family
PAMIGPLM_00244	1.86e-242	-	-	-	-	-	-	-	-
PAMIGPLM_00245	4.02e-190	-	-	-	S	-	-	-	Protein of unknown function (DUF805)
PAMIGPLM_00246	0.0	gltX	6.1.1.17	-	J	ko:K01885	ko00860,ko00970,ko01100,ko01110,ko01120,map00860,map00970,map01100,map01110,map01120	ko00000,ko00001,ko00002,ko01000,ko01007,ko02048,ko03016	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
PAMIGPLM_00249	0.0	-	-	-	S	-	-	-	Calcineurin-like phosphoesterase
PAMIGPLM_00250	1.9e-180	ltbR	-	-	K	-	-	-	Transcriptional regulator, IclR family, C-terminal domain protein
PAMIGPLM_00251	0.0	leuC	4.2.1.33, 4.2.1.35	-	E	ko:K01703	ko00290,ko00660,ko00966,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map00966,map01100,map01110,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
PAMIGPLM_00252	2.68e-169	leuD	4.2.1.33, 4.2.1.35	-	E	ko:K01704	ko00290,ko00660,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map01100,map01110,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
PAMIGPLM_00253	6.6e-259	pyr	1.3.98.1	-	F	ko:K00226	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Dihydroorotate dehydrogenase
PAMIGPLM_00254	0.0	murA	2.5.1.7	-	M	ko:K00790	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PAMIGPLM_00255	2.09e-223	plsC2	2.3.1.51	-	I	ko:K00655	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Phosphate acyltransferases
PAMIGPLM_00256	1.31e-228	gpsA	1.1.1.94	-	I	ko:K00057	ko00564,ko01110,map00564,map01110	ko00000,ko00001,ko01000	NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
PAMIGPLM_00257	5.45e-279	ddl	6.3.2.4	-	F	ko:K01921	ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Belongs to the D-alanine--D-alanine ligase family
PAMIGPLM_00258	1.14e-277	-	-	-	P	ko:K02055	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding protein
PAMIGPLM_00259	1.38e-204	-	-	-	U	ko:K02054	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PAMIGPLM_00260	1.12e-188	-	-	-	U	ko:K02053	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PAMIGPLM_00261	4.12e-274	-	-	-	E	ko:K02052	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
PAMIGPLM_00262	3.9e-227	-	-	-	S	-	-	-	CAAX protease self-immunity
PAMIGPLM_00263	1.96e-177	-	-	-	M	-	-	-	Mechanosensitive ion channel
PAMIGPLM_00264	5.84e-293	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.87
PAMIGPLM_00265	2.18e-289	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.87
PAMIGPLM_00266	2.71e-160	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PAMIGPLM_00267	1.13e-293	-	2.6.1.1	-	E	ko:K11358	ko00220,ko00250,ko00270,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko01000,ko01007	Psort location Cytoplasmic, score 8.87
PAMIGPLM_00268	6.52e-100	gntK	2.7.1.12	-	F	ko:K00851	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko01000	Shikimate kinase
PAMIGPLM_00269	6.78e-164	gntR	-	-	K	-	-	-	FCD
PAMIGPLM_00270	7.04e-306	-	-	-	S	ko:K06902	ko04138,map04138	ko00000,ko00001,ko02000,ko04131	Vacuole effluxer Atg22 like
PAMIGPLM_00271	0.0	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.87
PAMIGPLM_00272	1.82e-41	rpmB	-	-	J	ko:K02902	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal L28 family
PAMIGPLM_00273	0.0	recG	3.6.4.12	-	L	ko:K03655	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	helicase superfamily c-terminal domain
PAMIGPLM_00274	2.4e-130	rsmD	2.1.1.171	-	L	ko:K08316	-	ko00000,ko01000,ko03009	Conserved hypothetical protein 95
PAMIGPLM_00275	3.94e-112	-	-	-	K	-	-	-	helix_turn_helix, arabinose operon control protein
PAMIGPLM_00276	3.82e-182	-	-	-	EGP	-	-	-	Major Facilitator Superfamily
PAMIGPLM_00277	3.21e-187	-	-	-	I	-	-	-	alpha/beta hydrolase fold
PAMIGPLM_00278	2.7e-192	trmD	2.1.1.228	-	J	ko:K00554	-	ko00000,ko01000,ko03016	Belongs to the RNA methyltransferase TrmD family
PAMIGPLM_00279	2.18e-138	rimM	-	-	J	ko:K02860	-	ko00000,ko03009	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
PAMIGPLM_00280	5.05e-47	-	-	-	S	ko:K06960	-	ko00000	Belongs to the UPF0109 family
PAMIGPLM_00281	7.94e-83	rpsP	-	-	J	ko:K02959	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Belongs to the bacterial ribosomal protein bS16 family
PAMIGPLM_00282	3.53e-232	-	-	-	S	-	-	-	Endonuclease/Exonuclease/phosphatase family
PAMIGPLM_00283	0.0	ffh	3.6.5.4	-	U	ko:K03106	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko01000,ko02044	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
PAMIGPLM_00284	0.0	cysS	6.1.1.16	-	J	ko:K01883	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-I aminoacyl-tRNA synthetase family
PAMIGPLM_00285	3.99e-194	-	6.3.5.2	-	F	ko:K01951	ko00230,ko00983,ko01100,map00230,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko01002	Peptidase C26
PAMIGPLM_00286	0.0	yjjK	-	-	S	ko:K15738	-	ko00000,ko02000	ABC transporter
PAMIGPLM_00287	8.37e-126	-	-	-	-	-	-	-	-
PAMIGPLM_00288	4.18e-315	-	-	-	S	ko:K07133	-	ko00000	Domain of unknown function (DUF4143)
PAMIGPLM_00289	1.54e-118	ilvN	2.2.1.6	-	E	ko:K01653	ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	ACT domain
PAMIGPLM_00290	0.0	ilvB	2.2.1.6	-	H	ko:K01652	ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Thiamine pyrophosphate enzyme, central domain
PAMIGPLM_00291	8.48e-178	rnc	3.1.26.3	-	J	ko:K03685	ko03008,ko05205,map03008,map05205	ko00000,ko00001,ko01000,ko03009,ko03019,ko03036	Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
PAMIGPLM_00292	8.1e-36	rpmF	-	-	J	ko:K02911	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Belongs to the bacterial ribosomal protein bL32 family
PAMIGPLM_00293	3.58e-148	-	-	-	S	ko:K07040	-	ko00000	Uncharacterized ACR, COG1399
PAMIGPLM_00294	5.15e-172	-	-	-	-	-	-	-	-
PAMIGPLM_00295	2.46e-113	coaD	2.7.7.3	-	H	ko:K00954	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
PAMIGPLM_00296	1.02e-76	-	-	-	S	-	-	-	Protein of unknown function (DUF3039)
PAMIGPLM_00297	6.86e-249	-	-	-	C	ko:K19265	-	ko00000,ko01000	Aldo/keto reductase family
PAMIGPLM_00298	7.09e-101	-	-	-	K	-	-	-	MerR, DNA binding
PAMIGPLM_00299	1.24e-156	rdgB	3.6.1.66	-	F	ko:K02428	ko00230,map00230	ko00000,ko00001,ko01000	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
PAMIGPLM_00300	2.31e-180	rph	2.7.7.56	-	J	ko:K00989	-	ko00000,ko01000,ko03016	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
PAMIGPLM_00301	0.0	pncB	6.3.4.21	-	F	ko:K00763	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
PAMIGPLM_00302	6.04e-309	-	-	-	V	ko:K12554	ko00550,ko01100,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Psort location Cytoplasmic, score 8.87
PAMIGPLM_00303	7.76e-297	-	-	-	V	ko:K12554	ko00550,ko01100,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Psort location Cytoplasmic, score 8.87
PAMIGPLM_00306	7.15e-232	-	-	-	S	ko:K07088	-	ko00000	Auxin Efflux Carrier
PAMIGPLM_00307	0.0	pgi	5.3.1.9	-	G	ko:K01810	ko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the GPI family
PAMIGPLM_00308	3.37e-79	rplS	-	-	J	ko:K02884	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
PAMIGPLM_00309	1.15e-157	lepB	3.4.21.89	-	U	ko:K03100	ko02024,ko03060,map02024,map03060	ko00000,ko00001,ko01000,ko01002	Belongs to the peptidase S26 family
PAMIGPLM_00310	5.44e-177	rnhB	3.1.26.4	-	L	ko:K03470	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PAMIGPLM_00311	1.61e-165	lolD	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
PAMIGPLM_00312	0.0	-	-	-	V	-	-	-	Efflux ABC transporter, permease protein
PAMIGPLM_00313	6.18e-211	-	-	-	S	ko:K07088	-	ko00000	Transporter, auxin efflux carrier (AEC) family protein
PAMIGPLM_00314	1.67e-293	dapE	3.5.1.18	-	E	ko:K01439	ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Peptidase dimerisation domain
PAMIGPLM_00315	0.0	rne	3.1.26.12	-	J	ko:K08300,ko:K08301	ko03018,map03018	ko00000,ko00001,ko00002,ko01000,ko03009,ko03019	Ribonuclease E/G family
PAMIGPLM_00316	1.19e-61	rplU	-	-	J	ko:K02888	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein binds to 23S rRNA in the presence of protein L20
PAMIGPLM_00317	3.53e-52	rpmA	-	-	J	ko:K02899	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal L27 protein
PAMIGPLM_00318	0.0	obg	-	-	S	ko:K03979	-	ko00000,ko01000,ko03009	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
PAMIGPLM_00319	1.24e-260	proB	2.7.2.11	-	E	ko:K00931	ko00330,ko00332,ko01100,ko01130,ko01230,map00330,map00332,map01100,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
PAMIGPLM_00320	4.69e-296	aspC	2.6.1.1, 2.6.1.2, 2.6.1.66	-	E	ko:K00812,ko:K08969,ko:K14260	ko00220,ko00250,ko00270,ko00290,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00290,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	DegT/DnrJ/EryC1/StrS aminotransferase family
PAMIGPLM_00322	3.48e-44	secE	-	-	U	ko:K03073	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
PAMIGPLM_00323	3.23e-177	nusG	-	-	K	ko:K02601	-	ko00000,ko03009,ko03021	Participates in transcription elongation, termination and antitermination
PAMIGPLM_00324	5.21e-95	rplK	-	-	J	ko:K02867	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
PAMIGPLM_00325	1.18e-157	rplA	-	-	J	ko:K02863	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
PAMIGPLM_00326	1.82e-180	-	-	-	QT	-	-	-	PucR C-terminal helix-turn-helix domain
PAMIGPLM_00327	0.0	-	-	-	-	-	-	-	-
PAMIGPLM_00328	6.21e-207	birA	6.3.4.15	-	H	ko:K03524	ko00780,ko01100,map00780,map01100	ko00000,ko00001,ko01000,ko03000	Biotin/lipoate A/B protein ligase family
PAMIGPLM_00329	9.8e-117	bioY	-	-	S	ko:K03523	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	BioY family
PAMIGPLM_00330	0.0	accC	6.3.4.14, 6.4.1.2, 6.4.1.3	-	I	ko:K11263	ko00061,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthase L chain, ATP binding domain protein
PAMIGPLM_00331	0.0	pccB	-	-	I	-	-	-	Carboxyl transferase domain
PAMIGPLM_00332	0.0	fas	-	-	I	ko:K11533	ko00061,ko01100,ko01212,ko04931,map00061,map01100,map01212,map04931	ko00000,ko00001,ko00002,ko01000,ko01004	Beta-ketoacyl synthase, C-terminal domain
PAMIGPLM_00334	2.52e-107	acpS	2.7.8.7	-	I	ko:K00997	ko00770,map00770	ko00000,ko00001,ko01000	Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
PAMIGPLM_00335	0.0	ams	2.4.1.4	GH13	G	ko:K05341	ko00500,map00500	ko00000,ko00001,ko01000	Alpha amylase, catalytic domain
PAMIGPLM_00337	7.68e-151	-	-	-	-	-	-	-	-
PAMIGPLM_00338	2.04e-56	rpsO	-	-	J	ko:K02956	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
PAMIGPLM_00339	0.0	pnp	2.7.7.8	-	J	ko:K00962	ko00230,ko00240,ko03018,map00230,map00240,map03018	ko00000,ko00001,ko00002,ko01000,ko03016,ko03019	Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction
PAMIGPLM_00340	2.09e-118	lemA	-	-	S	ko:K03744	-	ko00000	LemA family
PAMIGPLM_00341	0.0	-	-	-	S	-	-	-	Predicted membrane protein (DUF2207)
PAMIGPLM_00342	1.53e-217	-	-	-	C	-	-	-	Oxidoreductase, aldo keto reductase family protein
PAMIGPLM_00343	0.0	-	-	-	O	ko:K08303	ko05120,map05120	ko00000,ko00001,ko01000,ko01002	Peptidase family U32 C-terminal domain
PAMIGPLM_00344	8.07e-235	yfiH	-	-	Q	ko:K05810	-	ko00000,ko01000	Multi-copper polyphenol oxidoreductase laccase
PAMIGPLM_00345	1.52e-184	ispD	1.1.1.405, 2.7.7.40, 2.7.7.60	-	I	ko:K00991,ko:K21681	ko00040,ko00900,ko01100,ko01110,ko01130,map00040,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP)
PAMIGPLM_00346	8.36e-162	pcp	3.4.19.3	-	O	ko:K01304	-	ko00000,ko01000,ko01002	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
PAMIGPLM_00347	3.08e-146	-	-	-	D	-	-	-	nuclear chromosome segregation
PAMIGPLM_00348	0.0	pepC2	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	Peptidase C1-like family
PAMIGPLM_00349	1.04e-268	aroG	2.5.1.54	-	E	ko:K01626	ko00400,ko01100,ko01110,ko01130,ko01230,ko02024,map00400,map01100,map01110,map01130,map01230,map02024	ko00000,ko00001,ko00002,ko01000	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
PAMIGPLM_00350	2.05e-281	aroG	2.5.1.54	-	E	ko:K01626	ko00400,ko01100,ko01110,ko01130,ko01230,ko02024,map00400,map01100,map01110,map01130,map01230,map02024	ko00000,ko00001,ko00002,ko01000	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
PAMIGPLM_00351	1.22e-157	mtnN	3.2.2.9	-	E	ko:K01243	ko00270,ko01100,ko01230,map00270,map01100,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
PAMIGPLM_00352	4.14e-280	phoR	2.7.13.3	-	T	ko:K07636,ko:K07768	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	His Kinase A (phosphoacceptor) domain
PAMIGPLM_00353	2.31e-166	regX3	-	-	KT	ko:K07776	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	Transcriptional regulatory protein, C terminal
PAMIGPLM_00354	7.43e-257	pstS	-	-	P	ko:K02040	ko02010,ko02020,ko05152,map02010,map02020,map05152	ko00000,ko00001,ko00002,ko02000	Part of the ABC transporter complex PstSACB involved in phosphate import
PAMIGPLM_00355	2.6e-209	pstC	-	-	P	ko:K02037	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	probably responsible for the translocation of the substrate across the membrane
PAMIGPLM_00356	1.92e-218	pstA	-	-	P	ko:K02038	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Phosphate transport system permease
PAMIGPLM_00357	6.41e-190	pstB	3.6.3.27	-	P	ko:K02036	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PAMIGPLM_00358	9.03e-184	-	-	-	P	ko:K02077	-	ko00000,ko00002,ko02000	Zinc-uptake complex component A periplasmic
PAMIGPLM_00359	9.45e-315	-	-	-	S	ko:K06901	-	ko00000,ko02000	Permease family
PAMIGPLM_00360	5.91e-114	rplJ	-	-	J	ko:K02864	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
PAMIGPLM_00361	5.66e-69	rplL	-	-	J	ko:K02935	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
PAMIGPLM_00362	3.07e-231	-	-	-	T	-	-	-	Forkhead associated domain
PAMIGPLM_00363	0.0	-	-	-	L	-	-	-	Superfamily I DNA and RNA helicases and helicase subunits
PAMIGPLM_00364	1.18e-48	-	-	-	-	-	-	-	-
PAMIGPLM_00365	6.42e-118	-	-	-	NO	-	-	-	SAF
PAMIGPLM_00366	1.14e-40	-	-	-	S	-	-	-	Putative regulatory protein
PAMIGPLM_00367	4.38e-129	ygfA	6.3.3.2	-	H	ko:K01934	ko00670,ko01100,map00670,map01100	ko00000,ko00001,ko01000	5-formyltetrahydrofolate cyclo-ligase family
PAMIGPLM_00368	1.2e-143	rimJ	2.3.1.128	-	J	ko:K03790	-	ko00000,ko01000,ko03009	Acetyltransferase (GNAT) domain
PAMIGPLM_00369	2.09e-215	-	-	-	-	-	-	-	-
PAMIGPLM_00370	3.49e-63	groS	-	-	O	ko:K04078	-	ko00000,ko03029,ko03110	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
PAMIGPLM_00374	7.79e-35	rpmG	-	-	J	ko:K02913	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L33
PAMIGPLM_00375	1.36e-266	murB	1.3.1.98	-	M	ko:K00075	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation
PAMIGPLM_00376	0.0	-	-	-	E	ko:K03294	-	ko00000	aromatic amino acid transport protein AroP K03293
PAMIGPLM_00377	2.61e-78	fdxA	-	-	C	ko:K05524	-	ko00000	4Fe-4S binding domain
PAMIGPLM_00378	1.13e-271	dapC	-	-	E	-	-	-	Aminotransferase class I and II
PAMIGPLM_00380	1.57e-134	-	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding proteins, family 5 Middle
PAMIGPLM_00381	2.15e-264	-	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding proteins, family 5 Middle
PAMIGPLM_00382	2.92e-233	-	-	-	EP	ko:K02033	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PAMIGPLM_00383	7.66e-178	-	-	-	EP	ko:K02034	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PAMIGPLM_00384	5.06e-199	-	-	-	EP	ko:K02031,ko:K02034	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Oligopeptide/dipeptide transporter, C-terminal region
PAMIGPLM_00385	1.05e-194	-	-	-	E	ko:K02032	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter
PAMIGPLM_00386	0.0	-	3.2.1.37	GH43	G	ko:K01198	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 43 family
PAMIGPLM_00388	0.0	-	-	-	G	-	-	-	Psort location Cytoplasmic, score 8.87
PAMIGPLM_00389	3.23e-298	-	3.2.1.156	GH8	G	ko:K15531	-	ko00000,ko01000	CBM9 module, glycoside hydrolase family 8 protein and carbohydrate esterase family 4 protein K01238
PAMIGPLM_00390	0.0	-	-	-	G	-	-	-	candidate polyfunctional acetylxylan esterase b-xylosidase A-L-arabinofuranosidase, CBM9 module, glycoside hydrolase family 43 protein and carbohydrate esterase family 6 protein K01238
PAMIGPLM_00391	0.0	-	-	CE10	I	ko:K03929	-	ko00000,ko01000	Belongs to the type-B carboxylesterase lipase family
PAMIGPLM_00393	1.17e-287	dinB	2.7.7.7	-	L	ko:K02346	-	ko00000,ko01000,ko03400	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
PAMIGPLM_00394	0.0	-	-	-	M	ko:K07282	-	ko00000	Bacterial capsule synthesis protein PGA_cap
PAMIGPLM_00395	1.11e-236	pdxB	-	-	EH	-	-	-	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PAMIGPLM_00396	1.63e-146	yigZ	-	-	S	-	-	-	Uncharacterized protein family UPF0029
PAMIGPLM_00397	3e-158	-	-	-	-	-	-	-	-
PAMIGPLM_00398	0.0	malQ	2.4.1.25	GH77	G	ko:K00705	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	4-alpha-glucanotransferase
PAMIGPLM_00399	2.26e-104	rplM	-	-	J	ko:K02871	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
PAMIGPLM_00400	1.21e-99	rpsI	-	-	J	ko:K02996	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uS9 family
PAMIGPLM_00401	0.0	glgX	3.2.1.196, 3.2.1.68	CBM48,GH13	G	ko:K01214,ko:K02438	ko00500,ko01100,ko01110,map00500,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Belongs to the glycosyl hydrolase 13 family
PAMIGPLM_00402	1.17e-225	-	1.1.1.1, 1.1.1.287, 1.6.5.5	-	C	ko:K00001,ko:K00344,ko:K17818	ko00010,ko00040,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00040,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	Zinc-binding dehydrogenase
PAMIGPLM_00403	3.12e-287	csbX	-	-	EGP	-	-	-	Major Facilitator Superfamily
PAMIGPLM_00404	4.95e-98	-	-	-	E	-	-	-	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PAMIGPLM_00405	1.16e-274	-	-	-	GK	-	-	-	transcriptional repressor of nag (N-acetylglucosamine) operon K02565
PAMIGPLM_00406	9.26e-300	csbX	-	-	EGP	-	-	-	Major Facilitator Superfamily
PAMIGPLM_00407	5.19e-251	-	1.1.1.9	-	C	ko:K05351	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko00002,ko01000	Zinc-binding dehydrogenase
PAMIGPLM_00408	8.4e-234	-	-	-	K	-	-	-	helix_turn_helix, arabinose operon control protein
PAMIGPLM_00409	0.0	adhE	1.1.1.1, 1.2.1.10, 1.2.1.81	-	C	ko:K04072,ko:K15515	ko00010,ko00071,ko00350,ko00620,ko00625,ko00626,ko00650,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00620,map00625,map00626,map00650,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	belongs to the iron- containing alcohol dehydrogenase family
PAMIGPLM_00410	5.42e-67	rpsJ	-	-	J	ko:K02946	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Involved in the binding of tRNA to the ribosomes
PAMIGPLM_00411	1.64e-151	rplC	-	-	J	ko:K02906	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
PAMIGPLM_00412	3.02e-151	rplD	-	-	J	ko:K02926	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the polypeptide exit tunnel
PAMIGPLM_00413	8.86e-62	rplW	-	-	J	ko:K02892	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
PAMIGPLM_00414	2.71e-195	rplB	-	-	J	ko:K02886	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
PAMIGPLM_00415	3.44e-63	rpsS	-	-	J	ko:K02965	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
PAMIGPLM_00416	5.42e-75	rplV	-	-	J	ko:K02890	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
PAMIGPLM_00417	2.74e-147	rpsC	-	-	J	ko:K02982	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
PAMIGPLM_00418	3.85e-98	rplP	-	-	J	ko:K02878	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
PAMIGPLM_00419	1.37e-50	rpmC	-	-	J	ko:K02904	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uL29 family
PAMIGPLM_00420	5.52e-55	rpsQ	-	-	J	ko:K02961	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
PAMIGPLM_00421	2.55e-79	rplN	-	-	J	ko:K02874	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
PAMIGPLM_00422	1.81e-67	rplX	-	-	J	ko:K02895	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
PAMIGPLM_00423	1.6e-133	rplE	-	-	J	ko:K02931	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
PAMIGPLM_00424	4.1e-39	rpsN	-	-	J	ko:K02954	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PAMIGPLM_00425	3.93e-90	rpsH	-	-	J	ko:K02994	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
PAMIGPLM_00426	5.66e-124	rplF	-	-	J	ko:K02933	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
PAMIGPLM_00427	1.86e-77	rplR	-	-	J	ko:K02881	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
PAMIGPLM_00428	1.47e-129	rpsE	-	-	J	ko:K02988	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
PAMIGPLM_00429	1.24e-35	rpmD	-	-	J	ko:K02907	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L30p/L7e
PAMIGPLM_00430	5.12e-96	rplO	-	-	J	ko:K02876	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	binds to the 23S rRNA
PAMIGPLM_00431	5.9e-314	secY	-	-	U	ko:K03076	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
PAMIGPLM_00432	3e-127	adk	2.7.4.3	-	F	ko:K00939	ko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
PAMIGPLM_00433	6.91e-45	infA	-	-	J	ko:K02518	-	ko00000,ko03012	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
PAMIGPLM_00434	1.47e-20	rpmJ	-	-	J	ko:K02919	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL36 family
PAMIGPLM_00435	6.96e-83	rpsM	-	-	J	ko:K02952	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
PAMIGPLM_00436	1.48e-85	rpsK	-	-	J	ko:K02948	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
PAMIGPLM_00437	6.43e-238	rpoA	2.7.7.6	-	K	ko:K03040	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PAMIGPLM_00438	1.21e-87	rplQ	-	-	J	ko:K02879	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L17
PAMIGPLM_00439	3.16e-233	truA	5.4.99.12	-	J	ko:K06173	-	ko00000,ko01000,ko03016	Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
PAMIGPLM_00441	4.01e-145	-	-	-	-	-	-	-	-
PAMIGPLM_00442	4.21e-243	nusA	-	-	K	ko:K02600	-	ko00000,ko03009,ko03021	Participates in both transcription termination and antitermination
PAMIGPLM_00443	0.0	infB	-	-	J	ko:K02519	-	ko00000,ko03012,ko03029	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
PAMIGPLM_00444	1.9e-98	rbfA	-	-	J	ko:K02834	-	ko00000,ko03009	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
PAMIGPLM_00445	3.51e-241	truB	5.4.99.25	-	J	ko:K03177	-	ko00000,ko01000,ko03016	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
PAMIGPLM_00446	3.39e-276	ribF	2.7.1.26, 2.7.7.2	-	H	ko:K11753	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	riboflavin kinase
PAMIGPLM_00447	0.0	radA	-	-	O	ko:K04485	-	ko00000,ko03400	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
PAMIGPLM_00448	2.31e-140	-	-	-	-	-	-	-	-
PAMIGPLM_00449	5.05e-07	-	-	-	S	-	-	-	Mitochondrial domain of unknown function (DUF1713)
PAMIGPLM_00450	3.43e-163	rpiA	5.3.1.6	-	G	ko:K01807	ko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
PAMIGPLM_00451	2.98e-276	rnhA	3.1.26.4	-	L	ko:K03469	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PAMIGPLM_00452	0.0	-	-	-	T	-	-	-	GHKL domain
PAMIGPLM_00453	1.46e-195	-	-	-	T	-	-	-	LytTr DNA-binding domain
PAMIGPLM_00454	0.0	pgm	5.4.2.2	-	G	ko:K01835	ko00010,ko00030,ko00052,ko00230,ko00500,ko00520,ko00521,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00052,map00230,map00500,map00520,map00521,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
PAMIGPLM_00455	0.0	ptsG	-	-	G	ko:K02755,ko:K02756,ko:K02757	ko02060,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	pts system, glucose-specific IIABC component
PAMIGPLM_00456	1.83e-199	arbG	-	-	K	ko:K03488	-	ko00000,ko03000	CAT RNA binding domain
PAMIGPLM_00457	3.3e-261	-	-	-	I	-	-	-	Diacylglycerol kinase catalytic domain
PAMIGPLM_00458	2.97e-305	serS	6.1.1.11	-	J	ko:K01875	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
PAMIGPLM_00460	5.6e-238	-	-	-	O	-	-	-	ADP-ribosylglycohydrolase
PAMIGPLM_00461	1.86e-242	-	-	-	G	-	-	-	pfkB family carbohydrate kinase
PAMIGPLM_00462	0.0	-	-	-	U	ko:K03457	-	ko00000	Permease for cytosine/purines, uracil, thiamine, allantoin
PAMIGPLM_00463	1.13e-131	-	-	-	Q	-	-	-	Isochorismatase family
PAMIGPLM_00464	2.9e-157	tcsR3	-	-	K	-	-	-	helix_turn_helix, Lux Regulon
PAMIGPLM_00465	0.0	tcsS3	-	-	KT	-	-	-	PspC domain
PAMIGPLM_00466	4.25e-197	pspC	-	-	KT	-	-	-	PspC domain
PAMIGPLM_00467	9.51e-122	-	-	-	-	-	-	-	-
PAMIGPLM_00468	2.5e-147	-	-	-	S	-	-	-	Protein of unknown function (DUF4125)
PAMIGPLM_00469	0.0	-	-	-	S	-	-	-	Domain of unknown function (DUF4037)
PAMIGPLM_00470	2.04e-275	-	-	-	EGP	ko:K08156,ko:K19577	-	ko00000,ko02000	Major Facilitator Superfamily
PAMIGPLM_00473	0.0	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 9.99
PAMIGPLM_00474	9.33e-309	-	-	-	V	-	-	-	ABC transporter permease
PAMIGPLM_00475	3.97e-237	-	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter
PAMIGPLM_00476	7.79e-193	-	-	-	T	ko:K06950	-	ko00000	HD domain
PAMIGPLM_00477	1.17e-214	-	-	-	S	-	-	-	Glutamine amidotransferase domain
PAMIGPLM_00478	0.0	kup	-	-	P	ko:K03549	-	ko00000,ko02000	Transport of potassium into the cell
PAMIGPLM_00479	3.43e-235	tatD	-	-	L	ko:K03424	-	ko00000,ko01000	TatD related DNase
PAMIGPLM_00480	0.0	-	-	-	G	-	-	-	Alpha-L-arabinofuranosidase C-terminus
PAMIGPLM_00481	2.66e-30	-	-	-	G	-	-	-	alpha-galactosidase
PAMIGPLM_00482	9.3e-291	-	-	-	K	-	-	-	helix_turn _helix lactose operon repressor
PAMIGPLM_00483	0.0	-	3.2.1.22	-	G	ko:K07407	ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603	ko00000,ko00001,ko01000	Psort location Cytoplasmic, score 8.87
PAMIGPLM_00484	6.8e-162	-	-	-	-	-	-	-	-
PAMIGPLM_00485	0.0	-	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter
PAMIGPLM_00486	0.0	-	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter
PAMIGPLM_00487	4.42e-273	-	-	-	I	-	-	-	Hydrolase, alpha beta domain protein
PAMIGPLM_00489	1.92e-198	-	-	-	I	-	-	-	alpha/beta hydrolase fold
PAMIGPLM_00490	1.08e-296	-	-	-	M	-	-	-	Protein of unknown function (DUF2961)
PAMIGPLM_00491	7.99e-196	-	-	-	P	ko:K02026,ko:K10119	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PAMIGPLM_00492	4.05e-215	-	-	-	G	ko:K02025,ko:K10118	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PAMIGPLM_00493	0.0	-	-	-	G	ko:K10117	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding protein
PAMIGPLM_00494	9.72e-243	-	-	-	K	-	-	-	helix_turn _helix lactose operon repressor
PAMIGPLM_00495	0.0	-	-	-	M	-	-	-	probably involved in cell wall
PAMIGPLM_00496	0.0	-	3.2.1.14	GH18	S	ko:K01183	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Carbohydrate binding domain
PAMIGPLM_00497	0.0	-	-	-	T	-	-	-	Diguanylate cyclase, GGDEF domain
PAMIGPLM_00498	3.99e-239	-	-	-	K	ko:K02529	-	ko00000,ko03000	Transcriptional regulator, LacI family
PAMIGPLM_00499	1.77e-291	nagA	3.5.1.25	-	G	ko:K01443	ko00520,ko01130,map00520,map01130	ko00000,ko00001,ko01000	Amidohydrolase family
PAMIGPLM_00500	9.06e-191	nagB	3.5.99.6	-	G	ko:K02564	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
PAMIGPLM_00501	0.0	-	-	-	G	-	-	-	Glycosyl hydrolase family 20, domain 2
PAMIGPLM_00502	1.6e-220	-	2.7.1.2	-	GK	ko:K00845	ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	ROK family
PAMIGPLM_00503	1.13e-220	-	-	-	G	ko:K02026	-	ko00000,ko00002,ko02000	ABC transporter permease
PAMIGPLM_00504	7.7e-196	-	-	-	G	ko:K02025	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PAMIGPLM_00505	6.67e-308	-	-	-	G	ko:K02027	-	ko00000,ko00002,ko02000	Bacterial extracellular solute-binding protein
PAMIGPLM_00506	4.25e-271	-	-	-	GK	-	-	-	ROK family
PAMIGPLM_00507	0.0	gph	-	-	G	ko:K16209	-	ko00000,ko02000	Psort location CytoplasmicMembrane, score 10.00
PAMIGPLM_00508	0.0	-	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	Psort location Cytoplasmic, score 8.87
PAMIGPLM_00509	1.99e-175	-	3.5.99.2	-	K	ko:K03707	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000,ko03000	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway. Thus, catalyzes the conversion of 4-amino-5-aminomethyl-2-methylpyrimidine to 4-amino- 5-hydroxymethyl-2-methylpyrimidine (HMP)
PAMIGPLM_00511	0.0	lacZ3	-	-	G	-	-	-	Belongs to the glycosyl hydrolase 2 family
PAMIGPLM_00512	0.0	metG	6.1.1.10	-	J	ko:K01874	ko00450,ko00970,map00450,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
PAMIGPLM_00513	7.95e-139	-	-	-	-	-	-	-	-
PAMIGPLM_00514	7.89e-244	rsmI	2.1.1.198	-	H	ko:K07056	-	ko00000,ko01000,ko03009	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
PAMIGPLM_00515	1.84e-21	-	3.2.1.78	GH26	G	ko:K01218	ko00051,ko02024,map00051,map02024	ko00000,ko00001,ko01000	Glycosyl hydrolase family 26
PAMIGPLM_00516	2.13e-159	dedA1	-	-	S	ko:K03975	-	ko00000	SNARE associated Golgi protein
PAMIGPLM_00518	6.9e-166	-	-	-	S	-	-	-	HAD hydrolase, family IA, variant 3
PAMIGPLM_00519	6.08e-63	-	-	-	-	-	-	-	-
PAMIGPLM_00520	7.97e-147	hspR	-	-	K	ko:K13640	-	ko00000,ko03000	transcriptional regulator, MerR family
PAMIGPLM_00521	1.26e-228	dnaJ	-	-	O	ko:K03686,ko:K05516	-	ko00000,ko03029,ko03036,ko03110	DnaJ molecular chaperone homology domain
PAMIGPLM_00522	1.44e-103	grpE	-	-	O	ko:K03687	-	ko00000,ko03029,ko03110	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
PAMIGPLM_00523	0.0	dnaK	-	-	O	ko:K04043	ko03018,ko04212,ko05152,map03018,map04212,map05152	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	Heat shock 70 kDa protein
PAMIGPLM_00524	5.66e-187	-	-	-	S	-	-	-	Mitochondrial biogenesis AIM24
PAMIGPLM_00525	6.86e-70	strK	3.1.3.1, 3.1.3.39	-	P	ko:K01077,ko:K04342	ko00521,ko00730,ko00790,ko01100,ko01130,ko02020,map00521,map00730,map00790,map01100,map01130,map02020	ko00000,ko00001,ko00002,ko00537,ko01000,ko04147	Alkaline phosphatase homologues
PAMIGPLM_00526	8.23e-174	-	-	-	S	ko:K07090	-	ko00000	membrane transporter protein
PAMIGPLM_00527	5.79e-246	-	-	-	K	-	-	-	Psort location Cytoplasmic, score
PAMIGPLM_00528	7.83e-167	traX	-	-	S	-	-	-	TraX protein
PAMIGPLM_00529	6.12e-186	-	-	-	S	ko:K07025	-	ko00000	HAD-hyrolase-like
PAMIGPLM_00530	2.63e-292	apuB	3.2.1.41, 3.2.1.68	CBM48,GH13	G	ko:K01200,ko:K01214	ko00500,ko01100,ko01110,map00500,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Belongs to the glycosyl hydrolase 13 family
PAMIGPLM_00531	0.0	malQ	2.4.1.25	GH77	G	ko:K00705	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	4-alpha-glucanotransferase
PAMIGPLM_00532	3.22e-18	-	-	-	S	-	-	-	Transposon-encoded protein TnpV
PAMIGPLM_00533	1.16e-140	pepE	3.4.13.21	-	E	ko:K05995	-	ko00000,ko01000,ko01002	Peptidase family S51
PAMIGPLM_00534	1.68e-136	-	-	-	S	-	-	-	Protein of unknown function, DUF624
PAMIGPLM_00535	1.06e-194	-	-	-	G	ko:K02026,ko:K10119	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
PAMIGPLM_00536	2.23e-198	msmF	-	-	G	ko:K10118	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PAMIGPLM_00537	1.39e-234	-	-	-	K	-	-	-	Psort location Cytoplasmic, score
PAMIGPLM_00538	2.31e-236	-	-	-	K	-	-	-	Periplasmic binding protein-like domain
PAMIGPLM_00539	0.0	amyE	-	-	G	ko:K10117	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding protein
PAMIGPLM_00540	0.0	-	3.2.1.20	GH31	G	ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Alpha-amylase domain
PAMIGPLM_00541	0.0	amyE	-	-	G	ko:K10117	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding protein
PAMIGPLM_00542	4.88e-177	gpm2	3.1.3.73	-	G	ko:K02226	ko00860,ko01100,map00860,map01100	ko00000,ko00001,ko00002,ko01000	Phosphoglycerate mutase family
PAMIGPLM_00543	4.34e-82	-	-	-	S	-	-	-	Protein of unknown function (DUF4235)
PAMIGPLM_00544	1.89e-182	nfrA	-	-	C	-	-	-	Nitroreductase family
PAMIGPLM_00545	9.41e-59	-	-	-	-	-	-	-	-
PAMIGPLM_00546	4.18e-111	-	-	-	K	-	-	-	Cro/C1-type HTH DNA-binding domain
PAMIGPLM_00547	0.0	pacL2	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	Cation transporter/ATPase, N-terminus
PAMIGPLM_00548	0.0	-	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	Psort location Cytoplasmic, score 8.87
PAMIGPLM_00549	6.73e-193	-	-	-	S	-	-	-	Short repeat of unknown function (DUF308)
PAMIGPLM_00550	1.94e-66	-	-	-	S	-	-	-	Antitoxin component of a toxin-antitoxin (TA) module
PAMIGPLM_00551	1.44e-72	-	-	-	DJ	ko:K06218	-	ko00000,ko02048	Addiction module toxin, RelE StbE family
PAMIGPLM_00552	6.49e-19	-	-	-	S	-	-	-	Psort location Extracellular, score 8.82
PAMIGPLM_00553	1.17e-295	-	-	-	EGP	-	-	-	Transmembrane secretion effector
PAMIGPLM_00554	1.48e-223	rlmB	2.1.1.185	-	J	ko:K03218	-	ko00000,ko01000,ko03009	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PAMIGPLM_00555	0.0	-	-	-	KLT	-	-	-	Domain of unknown function (DUF4032)
PAMIGPLM_00556	1.26e-268	ugpC	-	-	E	ko:K10112	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
PAMIGPLM_00557	4.34e-169	-	-	-	K	-	-	-	LytTr DNA-binding domain
PAMIGPLM_00558	3.72e-316	-	-	-	T	-	-	-	GHKL domain
PAMIGPLM_00559	8.73e-139	-	-	-	-	-	-	-	-
PAMIGPLM_00560	3.76e-277	-	-	-	P	ko:K03281	-	ko00000	Voltage gated chloride channel
PAMIGPLM_00561	1.64e-64	-	-	-	S	ko:K07133	-	ko00000	Psort location Cytoplasmic, score
PAMIGPLM_00562	7.66e-179	-	-	-	-	-	-	-	-
PAMIGPLM_00563	3.71e-189	-	3.4.22.70	-	M	ko:K07284	-	ko00000,ko01000,ko01002,ko01011	Sortase family
PAMIGPLM_00564	1.56e-237	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
PAMIGPLM_00565	6.68e-18	-	-	-	S	-	-	-	LPXTG-motif cell wall anchor domain protein
PAMIGPLM_00566	0.0	-	-	-	S	-	-	-	LPXTG-motif cell wall anchor domain protein
PAMIGPLM_00568	5.41e-127	-	-	-	S	-	-	-	GtrA-like protein
PAMIGPLM_00569	0.0	-	3.2.1.21	GH3	G	ko:K05349	ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110	ko00000,ko00001,ko01000	Glycosyl hydrolase family 3 N-terminal domain protein
PAMIGPLM_00570	3.92e-153	-	3.6.1.27	-	I	ko:K19302	ko00550,map00550	ko00000,ko00001,ko01000,ko01011	Psort location CytoplasmicMembrane, score
PAMIGPLM_00571	5.79e-103	ypeA	2.3.1.1	-	K	ko:K22477	ko00220,ko01210,ko01230,map00220,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Psort location Cytoplasmic, score 8.87
PAMIGPLM_00572	1.84e-147	vex	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PAMIGPLM_00573	5.81e-272	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	Efflux ABC transporter, permease protein
PAMIGPLM_00574	8.94e-304	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter permease
PAMIGPLM_00575	2.45e-34	-	-	-	G	-	-	-	Major facilitator Superfamily
PAMIGPLM_00576	0.0	-	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	Psort location Cytoplasmic, score 8.87
PAMIGPLM_00577	3.07e-239	-	-	-	K	ko:K02529	-	ko00000,ko03000	Transcriptional regulator, LacI family
PAMIGPLM_00578	0.0	-	3.2.1.51	GH95	G	ko:K15923	ko00511,map00511	ko00000,ko00001,ko01000	Glycosyl hydrolase family 65, N-terminal domain
PAMIGPLM_00579	1.42e-212	-	4.1.2.28	-	EM	ko:K22397	ko00040,map00040	ko00000,ko00001,ko01000	Dihydrodipicolinate synthetase family
PAMIGPLM_00580	8.47e-202	-	-	-	S	-	-	-	Amidohydrolase
PAMIGPLM_00581	5.66e-186	-	1.1.1.100, 1.1.1.413	-	IQ	ko:K00059,ko:K18333,ko:K22322	ko00051,ko00061,ko00333,ko00780,ko01040,ko01100,ko01120,ko01130,ko01212,map00051,map00061,map00333,map00780,map01040,map01100,map01120,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	KR domain
PAMIGPLM_00582	3.38e-312	-	4.2.1.68	-	M	ko:K18334	ko00051,ko01120,map00051,map01120	ko00000,ko00001,ko01000	Enolase C-terminal domain-like
PAMIGPLM_00583	0.0	-	-	-	G	ko:K02027	-	ko00000,ko00002,ko02000	Bacterial extracellular solute-binding protein
PAMIGPLM_00584	5.59e-224	-	-	-	P	ko:K02026	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PAMIGPLM_00585	4.55e-212	-	-	-	P	ko:K02025	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PAMIGPLM_00586	3.89e-242	-	-	-	K	ko:K02529	-	ko00000,ko03000	Bacterial regulatory proteins, lacI family
PAMIGPLM_00587	1.79e-71	bga1	3.2.1.23	-	G	ko:K12308	ko00052,map00052	ko00000,ko00001,ko01000	beta-galactosidase activity
PAMIGPLM_00588	0.0	-	-	-	G	ko:K02027	-	ko00000,ko00002,ko02000	Bacterial extracellular solute-binding protein
PAMIGPLM_00589	3.54e-215	-	-	-	K	-	-	-	helix_turn _helix lactose operon repressor
PAMIGPLM_00592	3.37e-212	-	-	-	G	ko:K02026	-	ko00000,ko00002,ko02000	ABC transporter permease
PAMIGPLM_00593	3.46e-18	-	-	-	S	-	-	-	Psort location Extracellular, score 8.82
PAMIGPLM_00594	0.0	-	1.8.1.9	-	C	ko:K00384	ko00450,map00450	ko00000,ko00001,ko01000	Thioredoxin domain
PAMIGPLM_00595	4.1e-137	ahpC	1.11.1.15	-	O	ko:K03386	ko04214,map04214	ko00000,ko00001,ko01000,ko04147	C-terminal domain of 1-Cys peroxiredoxin
PAMIGPLM_00597	1.06e-198	-	-	-	G	ko:K10119	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PAMIGPLM_00598	3.02e-205	-	-	-	G	ko:K10118	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PAMIGPLM_00599	6.1e-313	-	-	-	G	ko:K10117	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding protein
PAMIGPLM_00600	2.11e-294	-	-	-	GK	-	-	-	ROK family
PAMIGPLM_00601	0.0	-	3.2.1.22	-	G	ko:K07407	ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603	ko00000,ko00001,ko01000	Glycosyl hydrolase family 36 N-terminal domain
PAMIGPLM_00602	2.32e-100	tadA	3.5.4.1, 3.5.4.33	-	FJ	ko:K01485,ko:K11991	ko00240,ko00330,ko01100,map00240,map00330,map01100	ko00000,ko00001,ko01000,ko03016	Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
PAMIGPLM_00603	0.0	nhaP	-	-	P	ko:K03316	-	ko00000	Sodium/hydrogen exchanger family
PAMIGPLM_00604	1.99e-197	-	-	-	S	ko:K06999	-	ko00000	Phospholipase/Carboxylesterase
PAMIGPLM_00605	2.99e-144	dcd	3.5.4.13	-	F	ko:K01494	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the dCTP deaminase family
PAMIGPLM_00606	3.9e-58	-	-	-	L	-	-	-	PFAM Integrase catalytic
PAMIGPLM_00607	3.03e-258	-	-	-	K	ko:K02529	-	ko00000,ko03000	helix_turn _helix lactose operon repressor
PAMIGPLM_00608	1.16e-267	-	-	-	G	ko:K02027,ko:K10227	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding protein
PAMIGPLM_00609	1.63e-206	-	-	-	U	ko:K02025	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PAMIGPLM_00610	7.79e-203	-	-	-	U	ko:K02026,ko:K10190	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PAMIGPLM_00611	2.69e-303	-	3.2.1.21	-	G	ko:K05350	ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110	ko00000,ko00001,ko01000	Glycosyl hydrolase family 1
PAMIGPLM_00612	1.35e-23	-	-	-	ET	ko:K16957	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial periplasmic substrate-binding proteins
PAMIGPLM_00613	7.94e-85	odh	1.5.1.28	-	I	ko:K04940	-	ko00000,ko01000	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
PAMIGPLM_00614	8.07e-94	tcyN	3.6.3.21	-	E	ko:K02028,ko:K10010,ko:K16960,ko:K16963	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter
PAMIGPLM_00615	1.23e-51	-	-	-	E	ko:K16958	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PAMIGPLM_00616	4.86e-36	-	-	-	P	ko:K16959	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PAMIGPLM_00617	4.03e-60	-	3.2.1.10	GH13	G	ko:K01182	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Alpha amylase, catalytic domain protein
PAMIGPLM_00618	1.76e-296	ilvA	4.3.1.19	-	E	ko:K01754	ko00260,ko00290,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00290,map01100,map01110,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Pyridoxal-phosphate dependent enzyme
PAMIGPLM_00619	1.57e-186	cobB2	-	-	K	ko:K12410	-	ko00000,ko01000	Sir2 family
PAMIGPLM_00620	7.68e-219	-	-	-	I	-	-	-	alpha/beta hydrolase fold
PAMIGPLM_00621	2.91e-302	-	-	-	L	-	-	-	PFAM Integrase catalytic
PAMIGPLM_00622	1.98e-181	-	-	-	L	-	-	-	IstB-like ATP binding protein
PAMIGPLM_00623	6.45e-35	-	-	-	L	ko:K07483	-	ko00000	transposase activity
PAMIGPLM_00624	3.05e-136	-	-	-	L	-	-	-	Transposase and inactivated derivatives
PAMIGPLM_00625	1.13e-242	-	-	-	K	ko:K02529	-	ko00000,ko03000	helix_turn _helix lactose operon repressor
PAMIGPLM_00626	0.0	-	-	-	G	ko:K03292	-	ko00000	Psort location CytoplasmicMembrane, score 10.00
PAMIGPLM_00627	2.99e-125	-	-	-	S	ko:K06889	-	ko00000	Serine aminopeptidase, S33
PAMIGPLM_00628	9.62e-270	menA	2.5.1.74	-	H	ko:K02548	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01006	Belongs to the MenA family. Type 1 subfamily
PAMIGPLM_00629	1.42e-178	gpmA	5.4.2.11	-	G	ko:K01834	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PAMIGPLM_00630	0.0	-	4.2.1.53	-	S	ko:K10254	-	ko00000,ko01000	MCRA family
PAMIGPLM_00631	1.74e-132	phoU	-	-	P	ko:K02039	-	ko00000	Plays a role in the regulation of phosphate uptake
PAMIGPLM_00632	1.06e-273	senX3	2.7.13.3	-	T	ko:K07768	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	ATPase histidine kinase DNA gyrase B HSP90 domain protein
PAMIGPLM_00633	3.36e-55	-	-	-	-	-	-	-	-
PAMIGPLM_00634	5.66e-279	serC	2.6.1.52	-	E	ko:K00831	ko00260,ko00680,ko00750,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map00750,map01100,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
PAMIGPLM_00635	6.95e-212	-	-	-	S	-	-	-	CHAP domain
PAMIGPLM_00636	2.31e-121	-	-	-	M	ko:K21471	-	ko00000,ko01000,ko01002,ko01011	NlpC/P60 family
PAMIGPLM_00637	1.53e-242	-	-	-	T	-	-	-	Universal stress protein family
PAMIGPLM_00638	7.52e-95	-	-	-	O	-	-	-	OsmC-like protein
PAMIGPLM_00639	2.4e-232	thyA	2.1.1.45	-	F	ko:K00560	ko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523	ko00000,ko00001,ko00002,ko01000	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
PAMIGPLM_00640	2.42e-166	folA	1.5.1.3	-	H	ko:K00287	ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523	ko00000,ko00001,ko00002,ko01000	dihydrofolate reductase
PAMIGPLM_00641	1.87e-113	ptpA	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	low molecular weight
PAMIGPLM_00643	3.01e-254	galE	5.1.3.2	-	M	ko:K01784	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the NAD(P)-dependent epimerase dehydratase family
PAMIGPLM_00644	2.53e-203	trmB	2.1.1.33	-	J	ko:K03439	-	ko00000,ko01000,ko03016	Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
PAMIGPLM_00648	0.0	-	5.1.3.2	-	GM	ko:K01784	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000	ADP-glyceromanno-heptose 6-epimerase activity
PAMIGPLM_00649	7.29e-214	-	-	-	-	-	-	-	-
PAMIGPLM_00650	0.0	-	-	-	S	-	-	-	Uncharacterised protein conserved in bacteria (DUF2194)
PAMIGPLM_00651	3.46e-128	-	-	GT4	M	ko:K21011	ko02025,map02025	ko00000,ko00001,ko01003	Domain of unknown function (DUF3492)
PAMIGPLM_00652	1.24e-166	-	-	GT4	M	ko:K21011	ko02025,map02025	ko00000,ko00001,ko01003	Domain of unknown function (DUF3492)
PAMIGPLM_00653	0.0	-	-	-	S	ko:K21012	ko02025,map02025	ko00000,ko00001	Putative exopolysaccharide Exporter (EPS-E)
PAMIGPLM_00654	0.0	-	-	-	M	ko:K06330	-	ko00000	CotH kinase protein
PAMIGPLM_00655	6.72e-204	-	-	-	P	-	-	-	VTC domain
PAMIGPLM_00656	4.21e-143	-	-	-	S	-	-	-	Domain of unknown function (DUF4956)
PAMIGPLM_00657	0.0	-	3.1.4.52	-	T	ko:K14051	ko02024,ko02026,map02024,map02026	ko00000,ko00001,ko01000	Putative diguanylate phosphodiesterase
PAMIGPLM_00658	1.73e-270	fucO	1.1.1.77, 1.1.99.37, 1.2.98.1	-	C	ko:K00048,ko:K17067	ko00625,ko00630,ko00640,ko00680,ko01120,ko01200,map00625,map00630,map00640,map00680,map01120,map01200	ko00000,ko00001,ko01000	Iron-containing alcohol dehydrogenase
PAMIGPLM_00659	3.15e-230	-	-	-	M	-	-	-	Glycosyltransferase like family 2
PAMIGPLM_00660	0.0	-	-	-	S	-	-	-	AI-2E family transporter
PAMIGPLM_00661	9.34e-294	-	-	-	M	-	-	-	Glycosyl transferase family 21
PAMIGPLM_00662	3.74e-294	dacB	3.4.16.4	-	M	ko:K07259	ko00550,map00550	ko00000,ko00001,ko01000,ko01002,ko01011	D-Ala-D-Ala carboxypeptidase 3 (S13) family
PAMIGPLM_00663	1.14e-254	tilS	2.4.2.8, 6.3.4.19	-	J	ko:K00760,ko:K04075	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko01000,ko03016	Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
PAMIGPLM_00664	7.02e-128	hpt	2.4.2.8	-	F	ko:K00760	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the purine pyrimidine phosphoribosyltransferase family
PAMIGPLM_00665	0.0	ftsH	-	-	O	ko:K03798	-	ko00000,ko00002,ko01000,ko01002,ko03110	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
PAMIGPLM_00666	2.51e-150	folE	3.5.4.16	-	H	ko:K01495	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	GTP cyclohydrolase
PAMIGPLM_00667	1.68e-197	folP	2.5.1.15	-	H	ko:K00796	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
PAMIGPLM_00668	0.0	folK	2.7.6.3, 4.1.2.25	-	H	ko:K00950,ko:K13940	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
PAMIGPLM_00669	2.11e-121	-	-	-	S	-	-	-	Protein of unknown function (DUF3180)
PAMIGPLM_00670	1.31e-210	tesB	-	-	I	ko:K10805	ko01040,map01040	ko00000,ko00001,ko01000,ko01004	Thioesterase-like superfamily
PAMIGPLM_00671	0.0	yjjK	-	-	S	-	-	-	ATP-binding cassette protein, ChvD family
PAMIGPLM_00672	2.7e-231	-	-	-	V	-	-	-	Beta-lactamase
PAMIGPLM_00673	1.82e-97	fms	3.5.1.88	-	J	ko:K01462	-	ko00000,ko01000	Removes the formyl group from the N-terminal Met of newly synthesized proteins
PAMIGPLM_00674	2.09e-109	-	1.1.1.193, 3.5.4.26	-	H	ko:K11752	ko00740,ko01100,ko01110,ko02024,map00740,map01100,map01110,map02024	ko00000,ko00001,ko00002,ko01000	Cytidine and deoxycytidylate deaminase zinc-binding region
PAMIGPLM_00675	0.0	-	-	-	G	ko:K17326	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter periplasmic binding protein YcjN precursor K02027
PAMIGPLM_00676	5.2e-225	-	-	-	U	ko:K17327	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PAMIGPLM_00677	9.32e-193	-	-	-	G	ko:K17328	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PAMIGPLM_00678	0.0	-	-	-	G	-	-	-	Psort location Cytoplasmic, score 8.87
PAMIGPLM_00679	0.0	-	3.2.1.37	GH43	G	ko:K01198	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 43 family
PAMIGPLM_00680	0.0	-	-	-	O	-	-	-	Highly conserved protein containing a thioredoxin domain
PAMIGPLM_00681	7.88e-302	-	3.2.1.156	GH8	G	ko:K15531	-	ko00000,ko01000	CBM9 module, glycoside hydrolase family 8 protein and carbohydrate esterase family 4 protein K01238
PAMIGPLM_00682	0.0	-	3.1.1.53	-	G	ko:K05970	-	ko00000,ko01000	Glycosyl hydrolase family 2, sugar binding domain protein
PAMIGPLM_00683	8.49e-12	-	-	-	C	-	-	-	Iron-containing alcohol dehydrogenase
PAMIGPLM_00684	4.43e-274	-	-	-	C	-	-	-	Iron-containing alcohol dehydrogenase
PAMIGPLM_00685	2.87e-217	-	-	-	F	-	-	-	Inosine-uridine preferring nucleoside hydrolase
PAMIGPLM_00686	0.0	xylB	2.7.1.17	-	G	ko:K00854	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko00002,ko01000	FGGY family of carbohydrate kinases, C-terminal domain
PAMIGPLM_00687	5.36e-289	xylR	-	-	GK	-	-	-	ROK family
PAMIGPLM_00688	3.94e-114	-	-	-	S	ko:K16925	-	ko00000,ko00002,ko02000	ABC-type cobalt transport system, permease component
PAMIGPLM_00689	1.22e-41	-	-	-	S	ko:K09936	ko02024,map02024	ko00000,ko00001,ko02000	Putative inner membrane exporter, YdcZ
PAMIGPLM_00691	4.11e-137	-	-	-	S	ko:K07149	-	ko00000	Membrane
PAMIGPLM_00692	0.0	-	3.6.4.12	-	K	ko:K03655	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Putative ATP-dependent DNA helicase recG C-terminal
PAMIGPLM_00693	0.0	-	2.5.1.49	-	H	ko:K01740	ko00270,ko01100,map00270,map01100	ko00000,ko00001,ko01000	Psort location Cytoplasmic, score 9.98
PAMIGPLM_00694	0.0	xylA	5.3.1.5	-	G	ko:K01805	ko00040,ko00051,ko01100,map00040,map00051,map01100	ko00000,ko00001,ko01000	Belongs to the xylose isomerase family
PAMIGPLM_00695	0.0	-	3.2.1.37, 3.2.1.55	GH43,GH51	G	ko:K01198,ko:K01209	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 43 family
PAMIGPLM_00696	4.17e-237	-	-	-	K	ko:K02529,ko:K17640	-	ko00000,ko03000	Bacterial regulatory proteins, lacI family
PAMIGPLM_00697	1.22e-309	-	-	-	G	ko:K02027,ko:K10117	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter periplasmic binding protein YcjN precursor K02027
PAMIGPLM_00698	2.41e-236	-	-	-	U	ko:K02025,ko:K10118	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PAMIGPLM_00699	8.19e-212	-	-	-	P	ko:K02026,ko:K10119,ko:K17243	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PAMIGPLM_00700	0.0	-	3.2.1.37	GH43	G	ko:K01198	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 43 family
PAMIGPLM_00701	0.0	-	3.1.1.53	-	G	ko:K05970	-	ko00000,ko01000	Glycosyl hydrolase family 2, sugar binding domain protein
PAMIGPLM_00702	2.08e-143	maa	2.3.1.18, 2.3.1.79	-	S	ko:K00633,ko:K00661	-	ko00000,ko01000	Bacterial transferase hexapeptide repeat protein
PAMIGPLM_00703	0.0	xylB	2.7.1.17	-	G	ko:K00854	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko00002,ko01000	FGGY family of carbohydrate kinases, C-terminal domain
PAMIGPLM_00704	4.22e-286	xylR	-	-	GK	-	-	-	ROK family
PAMIGPLM_00706	2.63e-48	rpmE	-	-	J	ko:K02909	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds the 23S rRNA
PAMIGPLM_00707	4.95e-248	prfA	-	-	J	ko:K02835	-	ko00000,ko03012	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
PAMIGPLM_00708	3.12e-221	prmC	2.1.1.297	-	J	ko:K02493	-	ko00000,ko01000,ko03012	Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
PAMIGPLM_00709	6.78e-279	-	-	-	E	ko:K01999	ko02010,ko02024,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Receptor family ligand binding region
PAMIGPLM_00710	8.89e-199	-	-	-	U	ko:K01997	ko02010,ko02024,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
PAMIGPLM_00711	3.09e-249	-	-	-	U	ko:K01998	ko02010,ko02024,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
PAMIGPLM_00712	6.89e-192	livG	-	-	E	ko:K01995	ko02010,ko02024,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Branched-chain amino acid ATP-binding cassette transporter
PAMIGPLM_00713	8.3e-160	livF	-	-	E	ko:K01995,ko:K01996	ko02010,ko02024,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ATPases associated with a variety of cellular activities
PAMIGPLM_00714	2.44e-147	ywlC	2.7.7.87	-	J	ko:K07566	-	ko00000,ko01000,ko03009,ko03016	Belongs to the SUA5 family
PAMIGPLM_00715	1.55e-254	rfe	2.7.8.33, 2.7.8.35	-	M	ko:K02851	-	ko00000,ko01000,ko01003,ko01005	Glycosyl transferase family 4
PAMIGPLM_00716	0.0	guaB	1.1.1.205	-	F	ko:K00088	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth
PAMIGPLM_00717	2.33e-157	orn	-	-	L	ko:K13288	ko03008,map03008	ko00000,ko00001,ko01000,ko03009,ko03019	3'-to-5' exoribonuclease specific for small oligoribonucleotides
PAMIGPLM_00718	1.19e-206	-	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
PAMIGPLM_00719	0.0	-	-	-	L	-	-	-	PIF1-like helicase
PAMIGPLM_00720	0.0	proS	6.1.1.15	-	J	ko:K01881	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
PAMIGPLM_00721	2.54e-128	ssb2	-	-	L	ko:K03111	ko03030,ko03430,ko03440,map03030,map03430,map03440	ko00000,ko00001,ko03029,ko03032,ko03400	Single-strand binding protein family
PAMIGPLM_00722	0.0	pepO	3.4.24.11, 3.4.24.71	-	O	ko:K01389,ko:K01415,ko:K07386	ko04614,ko04640,ko04974,ko05010,map04614,map04640,map04974,map05010	ko00000,ko00001,ko01000,ko01002,ko04090,ko04147	Peptidase family M13
PAMIGPLM_00723	5.71e-193	map	3.4.11.18	-	E	ko:K01265	-	ko00000,ko01000,ko01002	Methionine aminopeptidase
PAMIGPLM_00724	0.0	gltA	2.3.3.1	-	C	ko:K01647	ko00020,ko00630,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map01100,map01110,map01120,map01130,map01200,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Citrate synthase, C-terminal domain
PAMIGPLM_00725	3.71e-215	dapD	2.3.1.117	-	E	ko:K00674	ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2- amino-6-oxopimelate using succinyl-CoA
PAMIGPLM_00726	5e-106	rlmH	2.1.1.177	-	J	ko:K00783	-	ko00000,ko01000,ko03009	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
PAMIGPLM_00727	2.95e-263	prfB	-	-	J	ko:K02836	-	ko00000,ko03012	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
PAMIGPLM_00728	3.54e-240	ftsE	-	-	D	ko:K09812	ko02010,map02010	ko00000,ko00001,ko00002,ko02000,ko03036	Cell division ATP-binding protein FtsE
PAMIGPLM_00729	3.84e-206	ftsX	-	-	D	ko:K09811	ko02010,map02010	ko00000,ko00001,ko00002,ko02000,ko03036	Part of the ABC transporter FtsEX involved in cellular division
PAMIGPLM_00730	6.64e-227	-	-	-	D	ko:K21471	-	ko00000,ko01000,ko01002,ko01011	CHAP domain protein
PAMIGPLM_00731	5e-106	smpB	-	-	J	ko:K03664	-	ko00000	the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
PAMIGPLM_00732	8.68e-207	glnH	-	-	ET	ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter, substrate-binding protein, family 3
PAMIGPLM_00733	3.78e-206	glnH	-	-	ET	ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter, substrate-binding protein, family 3
PAMIGPLM_00734	3.77e-201	glnH	-	-	ET	ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter, substrate-binding protein, family 3
PAMIGPLM_00735	1.79e-221	yecS	-	-	E	ko:K02029	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PAMIGPLM_00736	5.24e-187	tcyC	3.6.3.21	-	E	ko:K02028,ko:K02029	-	ko00000,ko00002,ko01000,ko02000	ATPases associated with a variety of cellular activities
PAMIGPLM_00737	0.0	glmS	2.6.1.16	-	M	ko:K00820	ko00250,ko00520,ko01100,ko01130,ko04931,map00250,map00520,map01100,map01130,map04931	ko00000,ko00001,ko01000,ko01002	Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
PAMIGPLM_00738	1.4e-184	-	5.4.99.28, 5.4.99.29	-	J	ko:K06177	-	ko00000,ko01000,ko03009,ko03016	RNA pseudouridylate synthase
PAMIGPLM_00739	3.12e-290	sstT	-	-	E	ko:K07862	-	ko00000,ko02000	Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
PAMIGPLM_00740	5.33e-243	-	-	-	K	-	-	-	Periplasmic binding protein domain
PAMIGPLM_00741	4.83e-231	-	-	-	G	ko:K02026	-	ko00000,ko00002,ko02000	ABC transporter permease
PAMIGPLM_00742	0.0	bga1	3.2.1.23	-	G	ko:K12308	ko00052,map00052	ko00000,ko00001,ko01000	Psort location Cytoplasmic, score 8.87
PAMIGPLM_00743	0.0	abfA1	3.2.1.55	GH51	G	ko:K01209	ko00520,map00520	ko00000,ko00001,ko01000	arabinose metabolic process
PAMIGPLM_00744	0.0	-	-	-	G	ko:K02027	-	ko00000,ko00002,ko02000	Bacterial extracellular solute-binding protein
PAMIGPLM_00745	0.0	-	-	-	G	ko:K02027	-	ko00000,ko00002,ko02000	Bacterial extracellular solute-binding protein
PAMIGPLM_00746	8.78e-157	-	-	-	K	-	-	-	Transcriptional regulatory protein, C terminal
PAMIGPLM_00747	4.01e-182	-	-	-	T	-	-	-	His Kinase A (phosphoacceptor) domain
PAMIGPLM_00748	3.81e-107	-	-	-	S	-	-	-	SnoaL-like domain
PAMIGPLM_00749	2.71e-185	coaX	2.7.1.33	-	H	ko:K03525	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
PAMIGPLM_00750	1.97e-307	coaBC	4.1.1.36, 6.3.2.5	-	H	ko:K13038	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
PAMIGPLM_00751	0.0	-	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substrate-binding protein, family 5
PAMIGPLM_00752	1.34e-211	-	-	-	P	ko:K02033	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PAMIGPLM_00753	5.4e-201	-	-	-	EP	ko:K02034	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PAMIGPLM_00754	3.93e-176	-	-	-	EP	ko:K02031	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	oligopeptide transport protein of the ABC superfamily, ATP-binding component
PAMIGPLM_00755	2.43e-176	-	-	-	E	ko:K02032	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ATPases associated with a variety of cellular activities
PAMIGPLM_00756	2.85e-243	cbs	2.5.1.47, 4.2.1.22	-	E	ko:K01697,ko:K01738	ko00260,ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00260,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Pyridoxal-phosphate dependent enzyme
PAMIGPLM_00757	1.57e-278	metB	2.5.1.48	-	E	ko:K01739	ko00270,ko00450,ko00920,ko01100,ko01110,ko01130,ko01230,map00270,map00450,map00920,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Cys/Met metabolism PLP-dependent enzyme
PAMIGPLM_00758	0.0	-	-	-	V	ko:K02003,ko:K02004	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
PAMIGPLM_00759	0.0	recQ	3.6.4.12	-	L	ko:K03654	ko03018,map03018	ko00000,ko00001,ko01000,ko03400	ATP-dependent DNA helicase RecQ
PAMIGPLM_00760	1.29e-117	luxS	4.4.1.21	-	H	ko:K07173	ko00270,ko01100,ko01230,ko02024,ko02026,ko05111,map00270,map01100,map01230,map02024,map02026,map05111	ko00000,ko00001,ko00002,ko01000	Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
PAMIGPLM_00761	4.58e-131	cysE	-	-	J	-	-	-	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
PAMIGPLM_00762	0.0	aap1	-	-	E	ko:K03294	-	ko00000	aromatic amino acid transport protein AroP K03293
PAMIGPLM_00763	0.0	alr	5.1.1.1	-	M	ko:K01775	ko00473,ko01100,ko01502,map00473,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
PAMIGPLM_00764	0.0	dnaG	-	-	L	ko:K02316	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
PAMIGPLM_00765	4.13e-276	-	-	-	P	-	-	-	Citrate transporter
PAMIGPLM_00767	2.28e-225	-	-	-	S	ko:K09936	ko02024,map02024	ko00000,ko00001,ko02000	Putative inner membrane exporter, YdcZ
PAMIGPLM_00769	0.0	tetM	-	-	J	ko:K18220	-	br01600,ko00000,ko01504	Elongation factor G, domain IV
PAMIGPLM_00773	3.74e-148	-	-	-	K	-	-	-	acetyltransferase
PAMIGPLM_00774	1.87e-139	glnP2	-	-	E	ko:K02029	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PAMIGPLM_00775	3.03e-157	glnP	-	-	E	ko:K02029,ko:K10040	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PAMIGPLM_00776	2.49e-194	glnQ	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	ATP binding protein of ABC transporter for glutamate aspartate K02028
PAMIGPLM_00777	1.19e-202	glnH	-	-	ET	ko:K02030,ko:K10039	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial periplasmic substrate-binding proteins
PAMIGPLM_00778	3.63e-257	-	1.1.1.169	-	H	ko:K00077	ko00770,ko01100,ko01110,map00770,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
PAMIGPLM_00779	4.14e-198	metQ	-	-	M	ko:K02073	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	NLPA lipoprotein
PAMIGPLM_00780	9.19e-244	metN	-	-	P	ko:K02071	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
PAMIGPLM_00781	4.35e-134	-	-	-	P	ko:K02072	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Psort location CytoplasmicMembrane, score 9.99
PAMIGPLM_00782	1.58e-282	-	2.6.1.1, 2.6.1.2, 2.6.1.66, 2.6.1.83	-	E	ko:K00812,ko:K08969,ko:K10206,ko:K14260,ko:K14261	ko00220,ko00250,ko00270,ko00290,ko00300,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00290,map00300,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase class I and II
PAMIGPLM_00783	2.19e-98	metC1	4.4.1.8	-	E	ko:K01760	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Cys/Met metabolism PLP-dependent enzyme
PAMIGPLM_00784	7.85e-59	-	-	-	O	-	-	-	Glutaredoxin
PAMIGPLM_00785	1.89e-178	hflK	-	-	O	-	-	-	prohibitin homologues
PAMIGPLM_00786	4.87e-18	-	-	-	S	ko:K07133	-	ko00000	Domain of unknown function (DUF4143)
PAMIGPLM_00787	2.01e-98	-	-	-	-	-	-	-	-
PAMIGPLM_00788	8.02e-172	-	-	-	V	ko:K02003,ko:K02004	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
PAMIGPLM_00789	2.68e-207	-	-	-	M	-	-	-	Conserved repeat domain
PAMIGPLM_00790	0.0	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	MacB-like periplasmic core domain
PAMIGPLM_00791	0.0	dxs	2.2.1.7	-	H	ko:K01662	ko00730,ko00900,ko01100,ko01110,ko01130,map00730,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
PAMIGPLM_00792	3.84e-233	yogA	-	-	C	-	-	-	Zinc-binding dehydrogenase
PAMIGPLM_00793	2.09e-110	purE	5.4.99.18	-	F	ko:K01588	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
PAMIGPLM_00794	3.33e-287	purK	6.3.4.18	-	F	ko:K01589	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
PAMIGPLM_00795	7.41e-117	fur	-	-	P	ko:K03711	-	ko00000,ko03000	Belongs to the Fur family
PAMIGPLM_00796	0.0	-	-	-	M	-	-	-	Psort location CytoplasmicMembrane, score 9.26
PAMIGPLM_00797	1.15e-259	-	2.7.1.83	-	G	ko:K16328	ko00240,map00240	ko00000,ko00001,ko01000	pfkB family carbohydrate kinase
PAMIGPLM_00798	4.55e-242	yeiI	2.7.1.15, 2.7.1.45, 2.7.1.83	-	G	ko:K00852,ko:K00874,ko:K16328	ko00030,ko00240,ko01100,ko01120,ko01200,map00030,map00240,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	pfkB family carbohydrate kinase
PAMIGPLM_00799	1.06e-165	trpF	5.3.1.24	-	E	ko:K01817	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	N-(5'phosphoribosyl)anthranilate (PRA) isomerase
PAMIGPLM_00800	3.01e-273	-	-	-	C	ko:K19954	-	ko00000,ko01000	Iron-containing alcohol dehydrogenase
PAMIGPLM_00801	8.1e-236	rihB	3.2.2.1, 3.2.2.8	-	F	ko:K01239,ko:K01250,ko:K10213	ko00230,ko00240,ko00760,ko01100,map00230,map00240,map00760,map01100	ko00000,ko00001,ko01000	Inosine-uridine preferring nucleoside hydrolase
PAMIGPLM_00802	5.47e-314	-	-	-	EGP	-	-	-	Major Facilitator Superfamily
PAMIGPLM_00803	8.42e-299	purD	6.3.3.1, 6.3.4.13	-	F	ko:K01945,ko:K11788	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the GARS family
PAMIGPLM_00804	1.07e-242	purM	6.3.3.1	-	F	ko:K01933	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Phosphoribosylformylglycinamidine cyclo-ligase
PAMIGPLM_00805	0.0	purF	2.4.2.14	-	F	ko:K00764	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko01002	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
PAMIGPLM_00806	0.0	-	-	-	L	ko:K03502	-	ko00000,ko03400	DNA-damage repair protein (DNA polymerase IV) K00961
PAMIGPLM_00807	8.29e-34	-	-	-	-	-	-	-	-
PAMIGPLM_00808	7.74e-154	-	-	-	K	-	-	-	sequence-specific DNA binding
PAMIGPLM_00810	2.6e-256	-	-	-	-	-	-	-	-
PAMIGPLM_00811	2.81e-84	-	-	-	-	-	-	-	-
PAMIGPLM_00812	4.36e-142	-	-	-	-	-	-	-	-
PAMIGPLM_00813	2.04e-273	-	-	-	S	-	-	-	Short C-terminal domain
PAMIGPLM_00814	1.25e-78	-	-	-	S	-	-	-	Protein of unknown function (DUF4230)
PAMIGPLM_00816	5.35e-43	-	-	-	-	-	-	-	-
PAMIGPLM_00817	6.14e-49	-	-	-	-	-	-	-	-
PAMIGPLM_00818	0.0	purL	6.3.5.3	-	F	ko:K01952	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	CobB/CobQ-like glutamine amidotransferase domain
PAMIGPLM_00819	1.97e-175	purC	6.3.2.6	-	F	ko:K01923	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the SAICAR synthetase family
PAMIGPLM_00820	6.01e-289	purT	2.1.2.2	-	F	ko:K08289	ko00230,ko00670,ko01100,ko01110,ko01130,map00230,map00670,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
PAMIGPLM_00821	2.64e-289	-	-	-	M	-	-	-	Glycosyl transferase 4-like domain
PAMIGPLM_00822	1.49e-252	ltaE	4.1.2.48	-	E	ko:K01620	ko00260,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko01000	Beta-eliminating lyase
PAMIGPLM_00824	5.25e-241	-	-	-	S	ko:K03453	-	ko00000	SBF-like CPA transporter family (DUF4137)
PAMIGPLM_00825	5.77e-81	rpsL	-	-	J	ko:K02950	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
PAMIGPLM_00826	9.4e-105	rpsG	-	-	J	ko:K02992	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
PAMIGPLM_00827	0.0	fusA	-	-	J	ko:K02355	-	ko00000,ko03012,ko03029	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
PAMIGPLM_00828	2.12e-295	tuf	-	-	J	ko:K02358	-	ko00000,ko03012,ko03029,ko04147	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
PAMIGPLM_00829	2.2e-134	efp	-	-	J	ko:K02356	-	ko00000,ko03012	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
PAMIGPLM_00830	1.21e-98	nusB	-	-	K	ko:K03625	-	ko00000,ko03009,ko03021	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
PAMIGPLM_00831	2.95e-305	carA	6.3.5.5	-	F	ko:K01956	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the CarA family
PAMIGPLM_00832	0.0	carB	6.3.5.5	-	EF	ko:K01955	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
PAMIGPLM_00833	1.42e-218	pyrF	4.1.1.23	-	F	ko:K01591	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Essential for recycling GMP and indirectly, cGMP
PAMIGPLM_00834	3.1e-138	gmk	2.7.4.8	-	F	ko:K00942	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko00002,ko01000	Essential for recycling GMP and indirectly, cGMP
PAMIGPLM_00835	0.0	ilvD	4.2.1.9	-	H	ko:K01687	ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the IlvD Edd family
PAMIGPLM_00836	5.45e-61	rpoZ	2.7.7.6	-	K	ko:K03060	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
PAMIGPLM_00837	7.42e-291	metK	2.5.1.6	-	H	ko:K00789	ko00270,ko01100,ko01110,ko01230,map00270,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
PAMIGPLM_00838	0.0	priA	-	-	L	ko:K04066	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
PAMIGPLM_00839	1.23e-172	-	3.8.1.2	-	S	ko:K01560,ko:K07025	ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120	ko00000,ko00001,ko01000	Haloacid dehalogenase-like hydrolase
PAMIGPLM_00840	3.54e-229	fmt	2.1.2.9	-	J	ko:K00604	ko00670,ko00970,map00670,map00970	ko00000,ko00001,ko01000	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
PAMIGPLM_00841	1.29e-158	serB	3.1.3.3	-	E	ko:K01079	ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko01009	haloacid dehalogenase-like hydrolase
PAMIGPLM_00842	0.0	arc	-	-	O	ko:K13527	ko03050,map03050	ko00000,ko00001,ko00002,ko03051	AAA ATPase forming ring-shaped complexes
PAMIGPLM_00843	0.0	dop	3.5.1.119	-	S	ko:K20814	-	ko00000,ko01000,ko03051	Pup-ligase protein
PAMIGPLM_00844	8.18e-206	-	3.1.3.25	-	G	ko:K01092	ko00521,ko00562,ko01100,ko04070,map00521,map00562,map01100,map04070	ko00000,ko00001,ko00002,ko01000	Inositol monophosphatase family
PAMIGPLM_00845	5.14e-34	pup	-	-	S	ko:K13570	-	ko00000,ko04121	Protein modifier that is covalently attached to lysine residues of substrate proteins, thereby targeting them for proteasomal degradation. The tagging system is termed pupylation
PAMIGPLM_00846	0.0	pafA	6.3.1.19	-	O	ko:K13571	-	ko00000,ko00002,ko01000,ko03051	Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine
PAMIGPLM_00847	7.66e-181	-	-	-	C	-	-	-	FMN binding
PAMIGPLM_00848	4.52e-77	-	-	-	-	-	-	-	-
PAMIGPLM_00849	4.7e-57	hup	-	-	L	ko:K03530	-	ko00000,ko03032,ko03036,ko03400	Belongs to the bacterial histone-like protein family
PAMIGPLM_00850	0.0	-	-	-	S	-	-	-	Lysylphosphatidylglycerol synthase TM region
PAMIGPLM_00851	0.0	purB	4.3.2.2	-	F	ko:K01756	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Adenylosuccinate lyase C-terminal
PAMIGPLM_00852	0.0	-	-	-	S	-	-	-	PGAP1-like protein
PAMIGPLM_00853	4.02e-110	-	-	-	-	-	-	-	-
PAMIGPLM_00854	4.83e-232	-	-	-	S	ko:K07114	-	ko00000,ko02000	von Willebrand factor (vWF) type A domain
PAMIGPLM_00855	1.46e-241	-	-	-	S	ko:K07114	-	ko00000,ko02000	von Willebrand factor (vWF) type A domain
PAMIGPLM_00856	3.29e-121	-	-	-	-	-	-	-	-
PAMIGPLM_00857	7.08e-223	-	-	-	S	-	-	-	Protein of unknown function DUF58
PAMIGPLM_00858	1.31e-233	moxR	-	-	S	ko:K03924	-	ko00000,ko01000	ATPase family associated with various cellular activities (AAA)
PAMIGPLM_00859	9.46e-176	ung	3.2.2.27	-	L	ko:K03648	ko03410,ko05340,map03410,map05340	ko00000,ko00001,ko01000,ko03400	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
PAMIGPLM_00860	1.2e-117	-	-	-	S	-	-	-	LytR cell envelope-related transcriptional attenuator
PAMIGPLM_00861	0.0	groL	-	-	O	ko:K04077	ko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
PAMIGPLM_00862	1.74e-38	-	-	-	S	-	-	-	Proteins of 100 residues with WXG
PAMIGPLM_00863	2.92e-167	-	-	-	-	-	-	-	-
PAMIGPLM_00864	2.04e-169	phoP	-	-	KT	ko:K02483	-	ko00000,ko02022	Response regulator receiver domain protein
PAMIGPLM_00865	0.0	phoR	2.7.13.3	-	T	ko:K02484	-	ko00000,ko01000,ko01001,ko02022	ATPase histidine kinase DNA gyrase B HSP90 domain protein
PAMIGPLM_00866	6.1e-88	cspB	-	-	K	ko:K03704	-	ko00000,ko03000	'Cold-shock' DNA-binding domain
PAMIGPLM_00867	1.23e-243	-	-	-	S	-	-	-	Protein of unknown function (DUF3027)
PAMIGPLM_00868	1.36e-242	uspA	-	-	T	-	-	-	Belongs to the universal stress protein A family
PAMIGPLM_00869	0.0	clpC	-	-	O	ko:K03696	ko01100,map01100	ko00000,ko03110	ATPase family associated with various cellular activities (AAA)
PAMIGPLM_00870	0.0	codA	3.5.4.1, 3.5.4.21	-	F	ko:K01485,ko:K03365	ko00240,ko00330,ko01100,map00240,map00330,map01100	ko00000,ko00001,ko01000	Amidohydrolase family
PAMIGPLM_00871	0.0	-	-	-	QT	-	-	-	Purine catabolism regulatory protein-like family
PAMIGPLM_00872	3.1e-315	proP	-	-	EGP	ko:K03762	-	ko00000,ko02000	Sugar (and other) transporter
PAMIGPLM_00873	1.71e-180	-	3.5.2.10	-	S	ko:K01470	ko00330,map00330	ko00000,ko00001,ko01000	Creatinine amidohydrolase
PAMIGPLM_00874	1.25e-299	-	-	-	S	-	-	-	Domain of Unknown Function (DUF349)
PAMIGPLM_00875	0.0	hisS	6.1.1.21	-	J	ko:K01892	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Histidyl-tRNA synthetase
PAMIGPLM_00876	0.0	aspS	6.1.1.12	-	J	ko:K01876	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
PAMIGPLM_00877	0.0	glnP	-	-	E	ko:K02029,ko:K02030	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PAMIGPLM_00878	1.01e-179	glnQ	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	ATPases associated with a variety of cellular activities
PAMIGPLM_00879	1.57e-176	gluA	-	-	E	ko:K10008	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATP-binding protein of ABC transporter for glutamate K02028
PAMIGPLM_00880	8.45e-195	gluB	-	-	ET	ko:K10005	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the bacterial solute-binding protein 3 family
PAMIGPLM_00881	1.04e-144	gluC	-	-	E	ko:K10006	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PAMIGPLM_00882	3.03e-258	gluD	-	-	E	ko:K10007	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PAMIGPLM_00883	4.93e-244	-	-	-	S	-	-	-	Polyphosphate kinase 2 (PPK2)
PAMIGPLM_00884	0.0	-	-	-	L	-	-	-	DEAD DEAH box helicase
PAMIGPLM_00885	0.0	rarA	-	-	L	ko:K07478	-	ko00000	Recombination factor protein RarA
PAMIGPLM_00886	6.21e-171	mtrA	-	-	KT	ko:K07670	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	Transcriptional regulatory protein, C terminal
PAMIGPLM_00887	0.0	mtrB	2.7.13.3	-	T	ko:K07636,ko:K07654	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PAMIGPLM_00888	0.0	lpqB	-	-	S	-	-	-	Lipoprotein LpqB beta-propeller domain
PAMIGPLM_00889	4.37e-219	-	-	-	G	ko:K02058,ko:K10439	ko02010,ko02030,map02010,map02030	ko00000,ko00001,ko00002,ko02000	Periplasmic binding protein domain
PAMIGPLM_00890	0.0	-	3.6.3.17	-	G	ko:K02056,ko:K10441	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATPases associated with a variety of cellular activities
PAMIGPLM_00891	2.87e-231	ytfT	-	-	U	ko:K02057,ko:K10440	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Branched-chain amino acid transport system / permease component
PAMIGPLM_00892	1.77e-219	-	-	-	U	ko:K02057,ko:K10440,ko:K17209	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Branched-chain amino acid transport system / permease component
PAMIGPLM_00893	0.0	-	-	-	EGP	-	-	-	Major Facilitator Superfamily
PAMIGPLM_00894	0.0	dppA	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substrate-binding protein, family 5
PAMIGPLM_00895	1.25e-147	clpP1	3.4.21.92	-	O	ko:K01358	ko04112,ko04212,map04112,map04212	ko00000,ko00001,ko01000,ko01002	Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
PAMIGPLM_00896	9.35e-161	clpP	3.4.21.92	-	O	ko:K01358	ko04112,ko04212,map04112,map04212	ko00000,ko00001,ko01000,ko01002	Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
PAMIGPLM_00897	5.76e-308	clpX	-	-	O	ko:K03544	ko04112,map04112	ko00000,ko00001,ko03110	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
PAMIGPLM_00900	2.92e-315	nhaA	-	-	P	ko:K03313	-	ko00000,ko02000	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
PAMIGPLM_00901	1.23e-151	safC	-	-	S	-	-	-	O-methyltransferase
PAMIGPLM_00902	2.79e-225	sdhB	1.3.5.1, 1.3.5.4	-	C	ko:K00240	ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	4Fe-4S dicluster domain
PAMIGPLM_00903	0.0	sdhA	1.3.5.1, 1.3.5.4, 1.4.3.16	-	C	ko:K00239,ko:K00278	ko00020,ko00190,ko00250,ko00650,ko00720,ko00760,ko01100,ko01110,ko01120,ko01130,ko01200,ko05134,map00020,map00190,map00250,map00650,map00720,map00760,map01100,map01110,map01120,map01130,map01200,map05134	ko00000,ko00001,ko00002,ko01000	Succinate dehydrogenase flavoprotein subunit
PAMIGPLM_00904	0.0	dprA	-	-	LU	ko:K04096	-	ko00000	DNA recombination-mediator protein A
PAMIGPLM_00905	0.0	comM	-	-	O	ko:K07391	-	ko00000	Magnesium chelatase, subunit ChlI C-terminal
PAMIGPLM_00906	1.85e-108	yraN	-	-	L	ko:K07460	-	ko00000	Belongs to the UPF0102 family
PAMIGPLM_00907	4.32e-211	pdxY	2.7.1.35	-	H	ko:K00868	ko00750,ko01100,map00750,map01100	ko00000,ko00001,ko01000	Phosphomethylpyrimidine kinase
PAMIGPLM_00908	0.0	-	2.5.1.49	-	E	ko:K01740	ko00270,ko01100,map00270,map01100	ko00000,ko00001,ko01000	Aminotransferase class-V
PAMIGPLM_00909	1.88e-124	-	-	-	S	-	-	-	ECF-type riboflavin transporter, S component
PAMIGPLM_00910	0.0	ykoD	-	-	P	ko:K16784,ko:K16786,ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	AAA domain, putative AbiEii toxin, Type IV TA system
PAMIGPLM_00911	1.5e-190	cbiQ	-	-	P	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Cobalt transport protein
PAMIGPLM_00912	4.02e-244	asnC	-	-	K	ko:K03718	-	ko00000,ko03000	helix_turn_helix ASNC type
PAMIGPLM_00913	1.28e-182	-	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PAMIGPLM_00914	0.0	-	-	-	MV	ko:K02004	-	ko00000,ko00002,ko02000	MacB-like periplasmic core domain
PAMIGPLM_00915	3.22e-164	-	-	-	K	-	-	-	helix_turn_helix, Lux Regulon
PAMIGPLM_00916	0.0	-	-	-	T	-	-	-	Histidine kinase
PAMIGPLM_00917	0.0	pip	3.4.11.5	-	S	ko:K01259	ko00330,map00330	ko00000,ko00001,ko01000,ko01002	alpha/beta hydrolase fold
PAMIGPLM_00918	1.32e-181	proC	1.5.1.2	-	E	ko:K00286	ko00330,ko01100,ko01110,ko01130,ko01230,map00330,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
PAMIGPLM_00919	3.03e-257	ychF	-	-	J	ko:K06942	-	ko00000,ko03009	ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
PAMIGPLM_00920	8.33e-13	yccF	-	-	S	-	-	-	Inner membrane component domain
PAMIGPLM_00921	2.7e-17	-	-	-	-	-	-	-	-
PAMIGPLM_00922	0.0	-	-	-	U	-	-	-	Drug resistance MFS transporter, drug H antiporter-2 family
PAMIGPLM_00923	5.47e-104	feoB	-	-	P	ko:K04759	-	ko00000,ko02000	transporter of a GTP-driven Fe(2 ) uptake system
PAMIGPLM_00924	7.27e-129	-	-	-	-	-	-	-	-
PAMIGPLM_00925	1.51e-207	-	-	-	S	-	-	-	Conserved hypothetical protein 698
PAMIGPLM_00926	8.42e-235	nhaC	-	-	C	ko:K03315	-	ko00000,ko02000	Na H antiporter family protein
PAMIGPLM_00927	8.65e-202	-	-	-	C	ko:K07138	-	ko00000	Domain of unknown function (DUF362)
PAMIGPLM_00928	5.87e-104	-	-	-	F	-	-	-	uridine kinase
PAMIGPLM_00929	4.4e-104	-	-	-	S	-	-	-	ECF transporter, substrate-specific component
PAMIGPLM_00930	3.03e-175	-	-	-	S	ko:K07090	-	ko00000	Sulfite exporter TauE/SafE
PAMIGPLM_00931	1.34e-181	-	-	-	K	-	-	-	helix_turn_helix, arabinose operon control protein
PAMIGPLM_00932	3.19e-200	-	-	-	G	-	-	-	Phosphoglycerate mutase family
PAMIGPLM_00933	2.42e-298	rutG	-	-	F	ko:K02824,ko:K03458	-	ko00000,ko02000	Permease family
PAMIGPLM_00934	9.34e-165	-	-	-	S	-	-	-	Enoyl-(Acyl carrier protein) reductase
PAMIGPLM_00935	0.0	-	-	-	JKL	-	-	-	helicase superfamily c-terminal domain
PAMIGPLM_00936	7.87e-172	-	-	-	V	ko:K02069	-	ko00000,ko00002,ko02000	Uncharacterised protein family (UPF0014)
PAMIGPLM_00937	9.98e-183	-	-	-	V	ko:K02068	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
PAMIGPLM_00938	4.09e-307	-	-	-	S	-	-	-	Putative esterase
PAMIGPLM_00939	0.0	lysX	-	-	S	-	-	-	Uncharacterised conserved protein (DUF2156)
PAMIGPLM_00940	0.0	gnd	1.1.1.343, 1.1.1.44	-	H	ko:K00033	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
PAMIGPLM_00941	7.18e-190	-	-	-	S	ko:K07124	-	ko00000	Belongs to the short-chain dehydrogenases reductases (SDR) family
PAMIGPLM_00942	5.69e-279	-	4.4.1.8	-	E	ko:K14155	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko01000,ko01007	Aminotransferase, class I II
PAMIGPLM_00943	0.0	zwf	1.1.1.363, 1.1.1.49	-	G	ko:K00036	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,ko05230,map00030,map00480,map01100,map01110,map01120,map01130,map01200,map05230	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
PAMIGPLM_00944	5.43e-233	opcA	-	-	G	-	-	-	Glucose-6-phosphate dehydrogenase subunit
PAMIGPLM_00945	1.43e-187	pgl	3.1.1.31	-	G	ko:K01057	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
PAMIGPLM_00946	1.97e-106	dtd	-	-	J	ko:K07560	-	ko00000,ko01000,ko03016	rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
PAMIGPLM_00947	1.05e-135	-	-	-	M	-	-	-	Protein of unknown function (DUF3737)
PAMIGPLM_00948	3.78e-181	-	-	-	E	-	-	-	AzlC protein
PAMIGPLM_00949	1.96e-71	azlD	-	-	E	-	-	-	Branched-chain amino acid transport protein (AzlD)
PAMIGPLM_00950	0.0	cstA	-	-	T	ko:K06200	-	ko00000	5TM C-terminal transporter carbon starvation CstA
PAMIGPLM_00951	1.2e-53	-	-	-	S	-	-	-	Selenoprotein, putative
PAMIGPLM_00952	2.6e-226	-	3.2.1.52	-	G	ko:K01207	ko00520,ko00531,ko01100,ko01501,map00520,map00531,map01100,map01501	ko00000,ko00001,ko00002,ko01000	Glycosyl hydrolase family 3 N-terminal domain protein
PAMIGPLM_00953	0.0	-	-	-	S	ko:K09118	-	ko00000	Uncharacterised protein family (UPF0182)
PAMIGPLM_00954	1.53e-121	-	2.3.1.183	-	M	ko:K03823	ko00440,ko01130,map00440,map01130	ko00000,ko00001,ko01000	Acetyltransferase (GNAT) domain
PAMIGPLM_00955	5.77e-145	pth	3.1.1.29	-	J	ko:K01056	-	ko00000,ko01000,ko03012	The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
PAMIGPLM_00956	0.0	mfd	-	-	L	ko:K03723	ko03420,map03420	ko00000,ko00001,ko01000,ko03400	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
PAMIGPLM_00957	7.13e-313	eno	4.2.1.11	-	G	ko:K01689	ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066	ko00000,ko00001,ko00002,ko01000,ko03019,ko04147	Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
PAMIGPLM_00958	9.8e-97	-	-	-	D	-	-	-	Septum formation initiator
PAMIGPLM_00959	7.96e-133	-	-	-	S	ko:K09009	-	ko00000	Protein of unknown function (DUF501)
PAMIGPLM_00960	3.69e-232	ppx	3.6.1.11, 3.6.1.40	-	FP	ko:K01524	ko00230,map00230	ko00000,ko00001,ko01000	Ppx/GppA phosphatase family
PAMIGPLM_00962	4.93e-88	-	-	-	P	-	-	-	Major Facilitator Superfamily
PAMIGPLM_00963	1.58e-120	-	-	-	-	-	-	-	-
PAMIGPLM_00964	0.0	sdaA	4.3.1.17	-	E	ko:K01752	ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230	ko00000,ko00001,ko01000	Serine dehydratase alpha chain
PAMIGPLM_00965	1.12e-95	fkbP	5.2.1.8	-	G	ko:K01802	-	ko00000,ko01000	Peptidyl-prolyl cis-trans
PAMIGPLM_00966	2.04e-105	greA	-	-	K	ko:K03624	-	ko00000,ko03021	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PAMIGPLM_00967	8.07e-202	hlyIII	-	-	S	ko:K11068	-	ko00000,ko02042	Haemolysin-III related
PAMIGPLM_00968	0.0	pdtaS	2.7.13.3	-	T	ko:K00936	-	ko00000,ko00002,ko01000,ko01001,ko02022	ATPase histidine kinase DNA gyrase B HSP90 domain protein
PAMIGPLM_00969	3.32e-61	whiB	-	-	K	ko:K18955	-	ko00000,ko03000	Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA
PAMIGPLM_00970	0.0	-	-	-	D	ko:K03466	-	ko00000,ko03036	FtsK/SpoIIIE family
PAMIGPLM_00971	6.77e-219	lytR2	-	-	K	-	-	-	Cell envelope-related transcriptional attenuator domain
PAMIGPLM_00973	5.03e-301	yvhJ	-	-	K	-	-	-	Cell envelope-related transcriptional attenuator domain
PAMIGPLM_00974	5.69e-72	whiB2	-	-	K	ko:K18955	-	ko00000,ko03000	Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA
PAMIGPLM_00975	0.0	-	-	-	S	-	-	-	Glycosyl transferase, family 2
PAMIGPLM_00976	2.18e-289	-	-	-	-	-	-	-	-
PAMIGPLM_00977	6.14e-93	-	-	-	S	-	-	-	Zincin-like metallopeptidase
PAMIGPLM_00978	2.99e-195	-	-	-	T	-	-	-	Eukaryotic phosphomannomutase
PAMIGPLM_00979	2.31e-178	pyrE_1	-	-	S	-	-	-	Phosphoribosyl transferase domain
PAMIGPLM_00980	1.99e-238	-	-	-	T	-	-	-	ATPase histidine kinase DNA gyrase B HSP90 domain protein
PAMIGPLM_00981	1.74e-165	cseB	-	-	T	-	-	-	Response regulator receiver domain protein
PAMIGPLM_00982	0.0	glgB	2.4.1.18	CBM48,GH13	G	ko:K00700	ko00500,ko01100,ko01110,map00500,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
PAMIGPLM_00983	8.46e-133	carD	-	-	K	ko:K07736	-	ko00000,ko03000	CarD-like/TRCF domain
PAMIGPLM_00984	9.24e-114	ispF	2.7.7.60, 4.6.1.12	-	H	ko:K01770,ko:K12506	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP)
PAMIGPLM_00985	3.19e-179	znuB	-	-	U	ko:K02075	-	ko00000,ko00002,ko02000	ABC 3 transport family
PAMIGPLM_00986	7.98e-205	-	-	-	P	ko:K02074	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
PAMIGPLM_00987	2.25e-228	-	-	-	P	ko:K02077	-	ko00000,ko00002,ko02000	Zinc-uptake complex component A periplasmic
PAMIGPLM_00988	3.88e-207	folD	1.5.1.5, 3.5.4.9	-	F	ko:K01491	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
PAMIGPLM_00989	0.0	rpsA	-	-	J	ko:K02945	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein S1
PAMIGPLM_00990	2.2e-149	coaE	2.7.1.24	-	H	ko:K00859	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
PAMIGPLM_00991	0.0	uvrB	-	-	L	ko:K03702	ko03420,map03420	ko00000,ko00001,ko03400	damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
PAMIGPLM_00993	5.3e-201	terC	-	-	P	ko:K05794	-	ko00000	Integral membrane protein, TerC family
PAMIGPLM_00994	0.0	pyk	2.7.1.40	-	G	ko:K00873	ko00010,ko00230,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko04930,ko05165,ko05203,ko05230,map00010,map00230,map00620,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map04930,map05165,map05203,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Pyruvate kinase
PAMIGPLM_00996	5.06e-88	-	5.99.1.2	-	L	ko:K03169	-	ko00000,ko01000,ko03032	DNA topoisomerase
PAMIGPLM_00997	2.55e-29	-	-	-	-	-	-	-	-
PAMIGPLM_01000	9.06e-108	-	-	-	KL	-	-	-	Type III restriction enzyme res subunit
PAMIGPLM_01001	4.45e-210	-	5.1.3.15	-	G	ko:K01792	ko00010,ko01100,ko01110,ko01120,ko01130,map00010,map01100,map01110,map01120,map01130	ko00000,ko00001,ko01000	Aldose 1-epimerase
PAMIGPLM_01002	8.26e-154	pdtaR	-	-	T	ko:K22010	-	ko00000,ko00002,ko02022	Response regulator receiver domain protein
PAMIGPLM_01003	0.0	polA	2.7.7.7	-	L	ko:K02335	ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440	ko00000,ko00001,ko01000,ko03032,ko03400	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
PAMIGPLM_01004	1.01e-221	-	-	-	L	-	-	-	NIF3 (NGG1p interacting factor 3)
PAMIGPLM_01005	4.34e-159	-	-	-	L	-	-	-	NUDIX domain
PAMIGPLM_01006	0.0	glgX	3.2.1.68	CBM48,GH13	G	ko:K01214	ko00500,ko01100,ko01110,map00500,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Belongs to the glycosyl hydrolase 13 family
PAMIGPLM_01007	1.18e-271	-	-	-	-	-	-	-	-
PAMIGPLM_01009	0.0	aroA	2.5.1.19	-	E	ko:K00800	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
PAMIGPLM_01010	5.33e-92	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
PAMIGPLM_01011	6.61e-100	-	-	-	K	ko:K03826	-	ko00000,ko01000	Acetyltransferase (GNAT) domain
PAMIGPLM_01012	0.0	guaA	6.3.5.2	-	F	ko:K01951	ko00230,ko00983,ko01100,map00230,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko01002	Catalyzes the synthesis of GMP from XMP
PAMIGPLM_01013	0.0	xfp	4.1.2.22, 4.1.2.9	-	G	ko:K01621	ko00030,ko00710,ko01100,ko01120,map00030,map00710,map01100,map01120	ko00000,ko00001,ko01000	D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase
PAMIGPLM_01014	0.0	pta	2.3.1.8	-	C	ko:K13788	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	phosphate acetyltransferase
PAMIGPLM_01015	8.03e-296	ackA	2.7.2.1	-	H	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PAMIGPLM_01016	0.0	yrhL	-	-	I	-	-	-	Psort location CytoplasmicMembrane, score 9.99
PAMIGPLM_01017	1.23e-311	pbuX	-	-	F	ko:K03458	-	ko00000	Permease family
PAMIGPLM_01018	2.66e-138	xpt	2.4.2.22	-	F	ko:K03816	ko00230,ko01100,ko01110,map00230,map01100,map01110	ko00000,ko00001,ko01000	Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
PAMIGPLM_01019	0.0	pcrA	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	DNA helicase
PAMIGPLM_01020	3.23e-80	-	-	-	S	-	-	-	Domain of unknown function (DUF4418)
PAMIGPLM_01021	8.69e-277	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	FtsX-like permease family
PAMIGPLM_01022	3.67e-192	-	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter
PAMIGPLM_01023	3.17e-142	rpsD	-	-	J	ko:K02986	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
PAMIGPLM_01024	1.33e-72	-	-	-	S	ko:K08972	-	ko00000	Mycobacterial 4 TMS phage holin, superfamily IV
PAMIGPLM_01025	9.46e-167	-	5.4.2.12	-	G	ko:K15634	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Phosphoglycerate mutase family
PAMIGPLM_01026	8.09e-79	-	-	-	S	-	-	-	Bacterial protein of unknown function (DUF948)
PAMIGPLM_01027	6.83e-50	-	-	-	-	-	-	-	-
PAMIGPLM_01028	0.0	alaS	6.1.1.7	-	J	ko:K01872	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
PAMIGPLM_01029	1.06e-106	ruvX	-	-	L	ko:K07447	-	ko00000,ko01000	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
PAMIGPLM_01030	2.36e-253	mltG	-	-	S	ko:K07082	-	ko00000	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
PAMIGPLM_01031	3.69e-95	-	3.4.23.43	-	S	ko:K02654	-	ko00000,ko00002,ko01000,ko01002,ko02035,ko02044	Type IV leader peptidase family
PAMIGPLM_01032	1.64e-282	aroC	4.2.3.5	-	E	ko:K01736	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
PAMIGPLM_01033	0.0	aroB	2.7.1.71, 4.2.3.4	-	H	ko:K01735,ko:K13829	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
PAMIGPLM_01034	3.9e-105	aroQ	4.2.1.10	-	E	ko:K03786	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes a trans-dehydration via an enolate intermediate
PAMIGPLM_01035	0.0	-	3.2.1.1, 3.2.1.41	CBM48,GH13	M	ko:K01176,ko:K01200	ko00500,ko01100,ko01110,ko04973,map00500,map01100,map01110,map04973	ko00000,ko00001,ko01000	Aamy_C
PAMIGPLM_01036	0.0	pyrG	6.3.4.2	-	F	ko:K01937	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
PAMIGPLM_01037	0.0	-	-	-	S	-	-	-	L,D-transpeptidase catalytic domain
PAMIGPLM_01038	0.0	sufB	-	-	O	ko:K09014	-	ko00000	FeS assembly protein SufB
PAMIGPLM_01039	2.61e-300	sufD	-	-	O	ko:K09015	-	ko00000	FeS assembly protein SufD
PAMIGPLM_01040	1.14e-183	sufC	-	-	O	ko:K09013	-	ko00000,ko02000	FeS assembly ATPase SufC
PAMIGPLM_01041	3.59e-302	sufS	2.8.1.7, 4.4.1.16	-	E	ko:K11717	ko00450,ko01100,map00450,map01100	ko00000,ko00001,ko01000	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
PAMIGPLM_01042	2.58e-131	iscU	-	-	C	ko:K04488	-	ko00000	SUF system FeS assembly protein, NifU family
PAMIGPLM_01043	1.6e-140	-	-	-	S	-	-	-	Iron-sulfur cluster assembly protein
PAMIGPLM_01044	5.57e-310	glgC	2.7.7.27	-	H	ko:K00975	ko00500,ko00520,ko01100,ko01110,ko02026,map00500,map00520,map01100,map01110,map02026	ko00000,ko00001,ko00002,ko01000	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
PAMIGPLM_01045	5e-207	spoU2	-	-	J	-	-	-	SpoU rRNA Methylase family
PAMIGPLM_01047	9.78e-188	-	2.1.1.193	-	J	ko:K09761	-	ko00000,ko01000,ko03009	Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
PAMIGPLM_01048	8.96e-75	hit	-	-	FG	ko:K02503	-	ko00000,ko04147	Scavenger mRNA decapping enzyme C-term binding
PAMIGPLM_01049	2.86e-267	phoH	-	-	T	ko:K06217	-	ko00000	PhoH-like protein
PAMIGPLM_01050	1.14e-133	ybeY	-	-	S	ko:K07042	-	ko00000,ko03009	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
PAMIGPLM_01051	0.0	corC	-	-	S	-	-	-	CBS domain
PAMIGPLM_01052	3.01e-227	era	-	-	S	ko:K03595	-	ko00000,ko03009,ko03029	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
PAMIGPLM_01053	0.0	fadD2	6.2.1.3	-	I	ko:K01897	ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920	ko00000,ko00001,ko00002,ko01000,ko01004,ko04147	AMP-binding enzyme
PAMIGPLM_01054	3.43e-260	pntA	1.6.1.2	-	C	ko:K00324	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	NAD(P) transhydrogenase subunit alpha part 1 K00324
PAMIGPLM_01055	2.06e-57	pntAB	1.6.1.2	-	C	ko:K00324	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	4TM region of pyridine nucleotide transhydrogenase, mitoch
PAMIGPLM_01056	0.0	pntB	1.6.1.2	-	C	ko:K00325	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
PAMIGPLM_01057	0.0	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.87
PAMIGPLM_01059	1.85e-285	-	-	-	G	-	-	-	Transmembrane secretion effector
PAMIGPLM_01060	5.26e-155	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PAMIGPLM_01062	3.96e-53	nrdH	-	-	O	ko:K06191	-	ko00000	Glutaredoxin
PAMIGPLM_01063	5.61e-98	nrdI	-	-	F	ko:K03647	-	ko00000	Probably involved in ribonucleotide reductase function
PAMIGPLM_01064	0.0	nrdE	1.17.4.1	-	F	ko:K00525	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PAMIGPLM_01066	2.96e-242	nrdF	1.17.4.1	-	F	ko:K00526	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PAMIGPLM_01067	0.0	uvrA3	-	-	L	ko:K03701	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
PAMIGPLM_01068	3.74e-41	-	-	-	EGP	ko:K08177,ko:K19577	-	ko00000,ko02000	Major facilitator Superfamily
PAMIGPLM_01069	9.97e-36	yhjX	-	-	EGP	ko:K08177	-	ko00000,ko02000	Major facilitator Superfamily
PAMIGPLM_01070	1.08e-249	-	-	-	S	ko:K06889	-	ko00000	alpha beta
PAMIGPLM_01071	1.29e-127	ctc	-	-	J	ko:K02897	ko03010,map03010	ko00000,ko00001,ko00002,ko03011	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
PAMIGPLM_01072	2.44e-120	-	-	-	D	ko:K06199	-	ko00000,ko02000	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PAMIGPLM_01073	1e-76	crcB	-	-	U	ko:K06199	-	ko00000,ko02000	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PAMIGPLM_01074	1.11e-96	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
PAMIGPLM_01076	8.14e-290	ilvE	2.6.1.42	-	E	ko:K00826	ko00270,ko00280,ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00270,map00280,map00290,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Amino-transferase class IV
PAMIGPLM_01077	3.02e-174	-	-	-	S	-	-	-	UPF0126 domain
PAMIGPLM_01078	7.89e-46	rpsT	-	-	J	ko:K02968	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 16S ribosomal RNA
PAMIGPLM_01079	0.0	lepA	-	-	M	ko:K03596	ko05134,map05134	ko00000,ko00001	Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
PAMIGPLM_01080	1.82e-297	hemN	-	-	H	-	-	-	Involved in the biosynthesis of porphyrin-containing compound
PAMIGPLM_01081	9.78e-188	-	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Oxidoreductase, short chain dehydrogenase reductase family protein
PAMIGPLM_01082	0.0	-	-	-	C	-	-	-	Acyl-CoA reductase (LuxC)
PAMIGPLM_01083	4.3e-277	-	-	-	H	-	-	-	long-chain-fatty-acid--luciferin-component ligase, acyl-protein synthase
PAMIGPLM_01084	4.49e-297	-	-	-	F	-	-	-	Psort location CytoplasmicMembrane, score 10.00
PAMIGPLM_01085	0.0	gltB	1.4.1.13, 1.4.1.14, 1.4.7.1	-	E	ko:K00265,ko:K00284	ko00250,ko00630,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00250,map00630,map00910,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko01000	glutamate synthase NADPH large subunit
PAMIGPLM_01086	0.0	gltD	1.4.1.13, 1.4.1.14	-	C	ko:K00266	ko00250,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00250,map00910,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko01000	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
PAMIGPLM_01087	3.85e-98	-	-	-	-	-	-	-	-
PAMIGPLM_01088	0.0	glgA	2.4.1.342	GT4	G	ko:K16148	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000,ko01003	Starch synthase catalytic domain
PAMIGPLM_01089	2.73e-203	ylmA	3.6.3.34	-	P	ko:K02013	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATPases associated with a variety of cellular activities
PAMIGPLM_01090	2.29e-252	trmI	2.1.1.219, 2.1.1.220	-	J	ko:K07442	-	ko00000,ko01000,ko03016	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
PAMIGPLM_01091	1.67e-128	sixA	-	-	T	ko:K08296	-	ko00000,ko01000	Phosphoglycerate mutase family
PAMIGPLM_01092	1.35e-306	-	-	-	L	-	-	-	Phage integrase, N-terminal SAM-like domain
PAMIGPLM_01093	1.94e-83	-	-	-	-	-	-	-	-
PAMIGPLM_01094	1.28e-19	-	-	-	-	-	-	-	-
PAMIGPLM_01095	1.35e-84	-	-	-	S	-	-	-	Protein of unknown function (DUF3800)
PAMIGPLM_01096	2.36e-87	-	-	-	-	-	-	-	-
PAMIGPLM_01097	1.59e-45	-	-	-	-	-	-	-	-
PAMIGPLM_01101	1.9e-141	-	-	-	K	ko:K07741	-	ko00000	BRO family, N-terminal domain
PAMIGPLM_01103	1.83e-49	-	-	-	-	-	-	-	-
PAMIGPLM_01106	2.44e-05	-	-	-	-	-	-	-	-
PAMIGPLM_01107	6.82e-46	-	-	-	-	-	-	-	-
PAMIGPLM_01109	2.09e-102	ssb	-	-	L	ko:K03111	ko03030,ko03430,ko03440,map03030,map03430,map03440	ko00000,ko00001,ko03029,ko03032,ko03400	Single-strand binding protein family
PAMIGPLM_01110	7.82e-103	-	-	-	K	-	-	-	Transcriptional regulator
PAMIGPLM_01111	1.53e-35	-	-	-	-	-	-	-	-
PAMIGPLM_01112	9.94e-103	-	-	-	V	-	-	-	HNH endonuclease
PAMIGPLM_01113	4.4e-132	-	-	-	A	ko:K13288	ko03008,map03008	ko00000,ko00001,ko01000,ko03009,ko03019	3'-to-5' exoribonuclease specific for small oligoribonucleotides
PAMIGPLM_01118	5.35e-23	-	-	-	-	-	-	-	-
PAMIGPLM_01119	4.06e-211	-	-	-	J	-	-	-	tRNA 5'-leader removal
PAMIGPLM_01120	1.29e-66	-	-	-	V	-	-	-	HNH nucleases
PAMIGPLM_01121	2.89e-77	-	-	-	-	-	-	-	-
PAMIGPLM_01122	0.0	-	-	-	S	-	-	-	Terminase
PAMIGPLM_01123	0.0	-	-	-	S	-	-	-	Phage portal protein, SPP1 Gp6-like
PAMIGPLM_01124	2.39e-139	-	-	-	-	-	-	-	-
PAMIGPLM_01126	1.73e-95	-	-	-	-	-	-	-	-
PAMIGPLM_01127	7.73e-199	-	-	-	V	-	-	-	Phage capsid family
PAMIGPLM_01129	6.78e-82	-	-	-	S	-	-	-	Phage protein Gp19/Gp15/Gp42
PAMIGPLM_01130	1.03e-62	-	-	-	-	-	-	-	-
PAMIGPLM_01131	2.21e-46	-	-	-	-	-	-	-	-
PAMIGPLM_01132	2.27e-80	-	-	-	-	-	-	-	-
PAMIGPLM_01133	1.84e-140	-	-	-	-	-	-	-	-
PAMIGPLM_01134	2.15e-82	-	-	-	-	-	-	-	-
PAMIGPLM_01136	0.0	-	-	-	S	-	-	-	phage tail tape measure protein
PAMIGPLM_01137	2.65e-181	-	-	-	-	-	-	-	-
PAMIGPLM_01138	0.0	-	-	-	S	-	-	-	Psort location Cytoplasmic, score
PAMIGPLM_01140	1.68e-106	-	-	-	-	-	-	-	-
PAMIGPLM_01142	1.26e-56	-	-	-	-	-	-	-	-
PAMIGPLM_01143	4.16e-117	-	-	-	L	-	-	-	DNA integration
PAMIGPLM_01144	1.47e-31	-	-	-	-	-	-	-	-
PAMIGPLM_01145	2.61e-68	-	-	-	MU	-	-	-	outer membrane autotransporter barrel domain protein
PAMIGPLM_01147	9.07e-05	-	-	-	-	-	-	-	-
PAMIGPLM_01149	5.17e-252	-	-	-	M	-	-	-	Glycosyl hydrolases family 25
PAMIGPLM_01150	4.22e-40	-	-	-	S	-	-	-	Putative phage holin Dp-1
PAMIGPLM_01151	0.0	metE	2.1.1.14	-	E	ko:K00549	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
PAMIGPLM_01152	7.55e-198	metF	1.5.1.20	-	E	ko:K00297	ko00670,ko00720,ko01100,ko01120,ko01200,ko01523,map00670,map00720,map01100,map01120,map01200,map01523	ko00000,ko00001,ko00002,ko01000	Methylenetetrahydrofolate reductase
PAMIGPLM_01153	0.0	glnE	2.7.7.42, 2.7.7.89	-	H	ko:K00982	-	ko00000,ko01000	Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell
PAMIGPLM_01154	2.43e-240	pyrB	2.1.3.2	-	F	ko:K00609	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the ATCase OTCase family
PAMIGPLM_01155	1.06e-96	pyrI	-	-	F	ko:K00610	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002	Aspartate carbamoyltransferase regulatory chain, allosteric domain protein
PAMIGPLM_01156	0.0	pyrC	3.5.2.3	-	F	ko:K01465	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
PAMIGPLM_01157	5.17e-222	pyrF	4.1.1.23	-	F	ko:K01591	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the OMP decarboxylase family. Type 2 subfamily
PAMIGPLM_01158	2.18e-191	pyrK	-	-	C	ko:K02823	ko00240,ko01100,map00240,map01100	ko00000,ko00001	Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B
PAMIGPLM_01159	2.22e-230	pyrD	1.3.1.14	-	F	ko:K17828	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
PAMIGPLM_01160	2.57e-157	pyrE	2.4.2.10	-	F	ko:K00762	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
PAMIGPLM_01161	3.49e-209	-	-	-	K	-	-	-	Bacterial regulatory helix-turn-helix protein, lysR family
PAMIGPLM_01162	0.0	thiC	4.1.99.17	-	H	ko:K03147	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
PAMIGPLM_01163	1.36e-140	-	-	-	J	-	-	-	Acetyltransferase (GNAT) domain
PAMIGPLM_01164	4.36e-89	arsC	1.20.4.1, 2.8.4.2	-	T	ko:K03741,ko:K18701	-	ko00000,ko01000	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
PAMIGPLM_01165	9.38e-279	-	2.1.1.14	-	E	ko:K00549	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Psort location Cytoplasmic, score 8.87
PAMIGPLM_01166	3.66e-157	-	2.3.1.18, 2.3.1.79	-	S	ko:K00633,ko:K00661	-	ko00000,ko01000	Maltose acetyltransferase
PAMIGPLM_01167	6.64e-67	-	-	-	K	-	-	-	helix_turn_helix, Arsenical Resistance Operon Repressor
PAMIGPLM_01168	5.87e-180	-	-	-	S	-	-	-	SdpI/YhfL protein family
PAMIGPLM_01169	3.2e-157	-	3.8.1.2	-	S	ko:K01560,ko:K07025	ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120	ko00000,ko00001,ko01000	Haloacid dehalogenase-like hydrolase
PAMIGPLM_01170	0.0	nnrD	4.2.1.136, 5.1.99.6	-	H	ko:K17758,ko:K17759	-	ko00000,ko01000	Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
PAMIGPLM_01171	5.36e-161	-	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter
PAMIGPLM_01174	1.81e-81	-	-	-	-	-	-	-	-
PAMIGPLM_01175	9.76e-125	-	-	-	M	-	-	-	Peptidase family M23
PAMIGPLM_01176	0.0	fadD1	6.2.1.3	-	I	ko:K01897	ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920	ko00000,ko00001,ko00002,ko01000,ko01004,ko04147	AMP-binding enzyme
PAMIGPLM_01177	0.0	-	-	-	G	-	-	-	ABC transporter substrate-binding protein
PAMIGPLM_01178	1.58e-305	icd	1.1.1.42	-	C	ko:K00031	ko00020,ko00480,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,ko04146,map00020,map00480,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230,map04146	br01601,ko00000,ko00001,ko00002,ko01000	Belongs to the isocitrate and isopropylmalate dehydrogenases family
PAMIGPLM_01179	1.07e-265	guaB3	1.1.1.205	-	F	ko:K00088	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko04147	IMP dehydrogenase family protein
PAMIGPLM_01180	5.78e-139	dnaQ	2.7.7.7	-	L	ko:K02342	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	Exonuclease, DNA polymerase III, epsilon subunit family
PAMIGPLM_01181	3.58e-93	-	-	-	U	ko:K06956	-	ko00000	Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
PAMIGPLM_01182	5.69e-315	glmU	2.3.1.157, 2.7.7.23	-	M	ko:K04042	ko00520,ko01100,ko01130,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
PAMIGPLM_01183	3.94e-88	rsfS	-	-	J	ko:K09710	-	ko00000,ko03009	Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
PAMIGPLM_01184	7.33e-183	gpmB	3.1.3.85, 5.4.2.11	-	G	ko:K01834,ko:K22306	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Phosphoglycerate mutase family
PAMIGPLM_01185	1.69e-167	-	-	-	-	-	-	-	-
PAMIGPLM_01187	6.91e-298	-	-	-	K	-	-	-	Fic/DOC family
PAMIGPLM_01188	4.75e-92	pdxH	-	-	S	ko:K07006	-	ko00000	Pfam:Pyridox_oxidase
PAMIGPLM_01189	0.0	-	-	-	M	-	-	-	domain protein
PAMIGPLM_01192	2.45e-210	gpmB	3.1.3.85, 5.4.2.11	-	G	ko:K01834,ko:K22306	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Phosphoglycerate mutase family
PAMIGPLM_01193	1.48e-219	corA	-	-	P	ko:K03284	-	ko00000,ko02000	CorA-like Mg2+ transporter protein
PAMIGPLM_01194	2.74e-182	-	-	-	ET	ko:K10005	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial periplasmic substrate-binding proteins
PAMIGPLM_01195	0.0	leuS	6.1.1.4	-	J	ko:K01869	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Belongs to the class-I aminoacyl-tRNA synthetase family
PAMIGPLM_01196	4.58e-137	comEA	-	-	L	ko:K02237	-	ko00000,ko00002,ko02044	Helix-hairpin-helix motif
PAMIGPLM_01197	0.0	comEC	-	-	S	ko:K02238	-	ko00000,ko00002,ko02044	Competence protein
PAMIGPLM_01198	2.13e-228	holA	2.7.7.7	-	L	ko:K02340	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III delta subunit
PAMIGPLM_01199	7.17e-119	tsaE	-	-	S	ko:K06925	-	ko00000,ko03016	Threonylcarbamoyl adenosine biosynthesis protein TsaE
PAMIGPLM_01200	6.89e-190	yeaZ	-	-	O	ko:K14742	-	ko00000,ko03016	Glycoprotease family
PAMIGPLM_01201	1.73e-133	rimI	2.3.1.128	-	K	ko:K03789	-	ko00000,ko01000,ko03009	FR47-like protein
PAMIGPLM_01202	1.13e-250	tsaD	2.3.1.234	-	O	ko:K01409	-	ko00000,ko01000,ko03016	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
PAMIGPLM_01204	4.62e-152	yoaP	-	-	E	-	-	-	YoaP-like
PAMIGPLM_01205	7.51e-238	cbh	3.5.1.24	-	M	ko:K01442	ko00120,ko00121,ko01100,map00120,map00121,map01100	ko00000,ko00001,ko01000	Linear amide C-N hydrolase, choloylglycine hydrolase family protein
PAMIGPLM_01206	3.51e-154	-	-	-	S	ko:K16925	-	ko00000,ko00002,ko02000	ABC-type cobalt transport system, permease component
PAMIGPLM_01207	2.39e-93	-	-	-	K	-	-	-	MerR family regulatory protein
PAMIGPLM_01208	2.21e-253	adh	1.1.1.1	-	C	ko:K00001	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	Zinc-binding dehydrogenase
PAMIGPLM_01209	2.18e-184	-	4.1.1.44	-	S	ko:K01607	ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220	ko00000,ko00001,ko01000	Carboxymuconolactone decarboxylase family
PAMIGPLM_01210	7.46e-282	-	2.1.1.14	-	E	ko:K00549	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Psort location Cytoplasmic, score 8.87
PAMIGPLM_01211	5.02e-94	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
PAMIGPLM_01212	5.23e-233	-	-	-	P	-	-	-	Cation efflux family
PAMIGPLM_01215	1.17e-180	-	-	-	-	ko:K03646	-	ko00000,ko02000	-
PAMIGPLM_01216	4.82e-202	-	-	-	-	-	-	-	-
PAMIGPLM_01217	1.34e-186	mazG	3.6.1.66	-	S	ko:K02428,ko:K02499	ko00230,map00230	ko00000,ko00001,ko01000,ko03036	Psort location Cytoplasmic, score 8.87
PAMIGPLM_01218	0.0	-	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	Peptidase C1-like family
PAMIGPLM_01219	4.83e-216	-	-	-	S	-	-	-	IMP dehydrogenase activity
PAMIGPLM_01220	0.0	ybiT	-	-	S	ko:K06158	-	ko00000,ko03012	ABC transporter
PAMIGPLM_01221	4.74e-145	pncA	3.5.1.19	-	Q	ko:K08281	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Isochorismatase family
PAMIGPLM_01222	4.53e-88	ogt	2.1.1.63	-	L	ko:K00567,ko:K07443	-	ko00000,ko01000,ko03400	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
PAMIGPLM_01224	2.77e-19	-	-	-	-	-	-	-	-
PAMIGPLM_01225	0.0	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.87
PAMIGPLM_01226	1.68e-181	-	-	-	S	-	-	-	Domain of unknown function (DUF4194)
PAMIGPLM_01227	0.0	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.87
PAMIGPLM_01228	2.05e-280	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.87
PAMIGPLM_01229	0.0	uvrA	-	-	L	ko:K03701	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
PAMIGPLM_01230	0.0	uvrC	-	-	L	ko:K03703	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
PAMIGPLM_01231	1.98e-232	aroE	1.1.1.25	-	E	ko:K00014	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Shikimate dehydrogenase substrate binding domain
PAMIGPLM_01232	7.62e-219	yvcJ	-	-	S	ko:K06958	-	ko00000,ko03019	Displays ATPase and GTPase activities
PAMIGPLM_01233	2.1e-219	whiA	-	-	K	ko:K09762	-	ko00000	May be required for sporulation
PAMIGPLM_01234	3.72e-281	pgk	2.7.2.3, 5.3.1.1	-	F	ko:K00927,ko:K01803	ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Phosphoglycerate kinase
PAMIGPLM_01235	4.01e-191	tpiA	5.3.1.1	-	G	ko:K01803	ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
PAMIGPLM_01236	2.47e-44	secG	-	-	U	ko:K03075	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Preprotein translocase SecG subunit
PAMIGPLM_01237	1.58e-208	-	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
PAMIGPLM_01238	0.0	aspC	2.6.1.1, 2.6.1.2, 2.6.1.66	-	E	ko:K00812,ko:K08969,ko:K14260	ko00220,ko00250,ko00270,ko00290,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00290,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase, class I II
PAMIGPLM_01240	5.52e-146	-	-	-	H	ko:K03811	-	ko00000,ko02000	Nicotinamide mononucleotide transporter
PAMIGPLM_01241	2.34e-61	-	-	-	H	-	-	-	ATPase kinase involved in NAD metabolism
PAMIGPLM_01242	6.7e-56	nadR	-	-	H	-	-	-	ATPase kinase involved in NAD metabolism
PAMIGPLM_01243	4.69e-260	tal	2.2.1.2	-	H	ko:K00616	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
PAMIGPLM_01244	0.0	tkt	2.2.1.1	-	H	ko:K00615	ko00030,ko00710,ko01051,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01051,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the transketolase family
PAMIGPLM_01245	1.38e-251	hrcA	-	-	K	ko:K03705	-	ko00000,ko03000	Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
PAMIGPLM_01246	7.8e-262	dnaJ	-	-	O	ko:K03686	-	ko00000,ko03029,ko03110	ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
PAMIGPLM_01247	1.58e-201	-	-	-	G	-	-	-	Fructosamine kinase
PAMIGPLM_01248	1.44e-199	uppP	3.6.1.27	-	V	ko:K06153	ko00550,map00550	ko00000,ko00001,ko01000,ko01011	Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
PAMIGPLM_01249	3.95e-200	-	-	-	S	-	-	-	PAC2 family
PAMIGPLM_01254	4.37e-46	-	-	-	-	-	-	-	-
PAMIGPLM_01255	2.22e-98	garA	-	-	T	-	-	-	Inner membrane component of T3SS, cytoplasmic domain
PAMIGPLM_01256	5.29e-145	merR2	-	-	K	-	-	-	helix_turn_helix, mercury resistance
PAMIGPLM_01257	1.54e-80	-	-	-	-	-	-	-	-
PAMIGPLM_01258	6.93e-180	nt5e	3.1.3.18	-	S	ko:K01091	ko00630,ko01100,ko01110,ko01130,map00630,map01100,map01110,map01130	ko00000,ko00001,ko01000	HAD-hyrolase-like
PAMIGPLM_01259	2.24e-81	rbpA	-	-	K	-	-	-	Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters
PAMIGPLM_01260	0.0	helY	-	-	L	ko:K03727	-	ko00000,ko01000	DEAD DEAH box helicase
PAMIGPLM_01261	2.4e-73	-	-	-	-	-	-	-	-
PAMIGPLM_01262	0.0	-	-	-	K	-	-	-	WYL domain
PAMIGPLM_01263	0.0	ugp	2.7.7.9	-	G	ko:K00963	ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	UTP-glucose-1-phosphate uridylyltransferase
PAMIGPLM_01265	8.64e-92	-	-	-	-	-	-	-	-
PAMIGPLM_01266	0.0	der	-	-	F	ko:K03977	-	ko00000,ko03009	GTPase that plays an essential role in the late steps of ribosome biogenesis
PAMIGPLM_01267	9.79e-184	rluB	5.4.99.19, 5.4.99.22	-	J	ko:K06178,ko:K06183	-	ko00000,ko01000,ko03009	Belongs to the pseudouridine synthase RsuA family
PAMIGPLM_01268	3.41e-207	-	-	-	U	ko:K06188	-	ko00000,ko02000	Belongs to the MIP aquaporin (TC 1.A.8) family
PAMIGPLM_01269	1.69e-48	-	-	-	-	-	-	-	-
PAMIGPLM_01270	0.0	purH	2.1.2.3, 3.5.4.10	-	F	ko:K00602	ko00230,ko00670,ko01100,ko01110,ko01130,ko01523,map00230,map00670,map01100,map01110,map01130,map01523	ko00000,ko00001,ko00002,ko01000,ko04147	Bifunctional purine biosynthesis protein PurH
PAMIGPLM_01271	0.0	-	-	-	-	-	-	-	-
PAMIGPLM_01272	1.1e-205	sucD	6.2.1.5	-	C	ko:K01902	ko00020,ko00640,ko00660,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00640,map00660,map00720,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
PAMIGPLM_01273	5.48e-281	sucC	6.2.1.5	-	F	ko:K01903	ko00020,ko00640,ko00660,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00640,map00660,map00720,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit
PAMIGPLM_01274	5.27e-130	apt	2.4.2.7	-	F	ko:K00759	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000,ko04147	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
PAMIGPLM_01275	1.05e-80	yajC	-	-	U	ko:K03210	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Preprotein translocase subunit
PAMIGPLM_01276	5.61e-255	ruvB	3.6.4.12	-	L	ko:K03551	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
PAMIGPLM_01277	1.34e-137	ruvA	3.6.4.12	-	L	ko:K03550	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
PAMIGPLM_01278	2.73e-129	ruvC	3.1.22.4	-	L	ko:K01159	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
PAMIGPLM_01279	2.38e-172	yebC	-	-	K	-	-	-	transcriptional regulatory protein
PAMIGPLM_01280	2.88e-144	pgsA1	2.7.8.11, 2.7.8.5	-	I	ko:K00995,ko:K00999	ko00562,ko00564,ko01100,ko04070,map00562,map00564,map01100,map04070	ko00000,ko00001,ko01000	CDP-alcohol phosphatidyltransferase
PAMIGPLM_01281	0.0	thrS	6.1.1.3	-	J	ko:K01868	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
PAMIGPLM_01282	3.76e-181	-	-	-	S	-	-	-	Bacterial protein of unknown function (DUF881)
PAMIGPLM_01283	3.81e-64	sbp	-	-	S	-	-	-	Protein of unknown function (DUF1290)
PAMIGPLM_01284	3.77e-221	-	-	-	S	-	-	-	Bacterial protein of unknown function (DUF881)
PAMIGPLM_01285	1.2e-133	pgsA2	2.7.8.41, 2.7.8.5	-	I	ko:K00995,ko:K08744	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
PAMIGPLM_01286	2.06e-198	hisG	2.4.2.17	-	F	ko:K00765,ko:K02502	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	ATP phosphoribosyltransferase
PAMIGPLM_01287	1.2e-54	hisE	3.6.1.31	-	E	ko:K01523	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Phosphoribosyl-ATP pyrophosphohydrolase
PAMIGPLM_01288	9.16e-137	rpe	5.1.3.1	-	G	ko:K01783	ko00030,ko00040,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Ribulose-phosphate 3-epimerase
PAMIGPLM_01289	2.39e-231	lgt	-	-	M	-	-	-	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
PAMIGPLM_01290	2.25e-207	trpA	4.2.1.20	-	E	ko:K01695	ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
PAMIGPLM_01291	0.0	trpB	4.2.1.20	-	E	ko:K01696	ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
PAMIGPLM_01292	0.0	trpE	4.1.3.27	-	E	ko:K01657	ko00400,ko00405,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00400,map00405,map01100,map01110,map01130,map01230,map02024,map02025	ko00000,ko00001,ko00002,ko01000	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
PAMIGPLM_01293	1.12e-95	hisI	3.5.4.19, 3.6.1.31	-	E	ko:K01496,ko:K11755	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
PAMIGPLM_01294	5.63e-178	hisF	4.1.3.27	-	E	ko:K01657,ko:K02500	ko00340,ko00400,ko00405,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00340,map00400,map00405,map01100,map01110,map01130,map01230,map02024,map02025	ko00000,ko00001,ko00002,ko01000	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
PAMIGPLM_01295	1.12e-287	rlmN	2.1.1.192	-	J	ko:K06941	-	ko00000,ko01000,ko03009	Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs
PAMIGPLM_01296	5.62e-228	cdsA	2.7.7.41	-	I	ko:K00981	ko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070	ko00000,ko00001,ko00002,ko01000	Cytidylyltransferase family
PAMIGPLM_01297	1.8e-118	frr	-	-	J	ko:K02838	-	ko00000,ko03012	Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
PAMIGPLM_01298	2.04e-172	pyrH	2.7.4.22	-	F	ko:K09903	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphorylation of UMP to UDP
PAMIGPLM_01300	6.23e-184	tsf	-	-	J	ko:K02357	-	ko00000,ko03012,ko03029	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
PAMIGPLM_01301	7.95e-183	rpsB	-	-	J	ko:K02967	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uS2 family
PAMIGPLM_01302	1.22e-107	def	3.5.1.88	-	J	ko:K01462	-	ko00000,ko01000	Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
PAMIGPLM_01303	0.0	fadD3	6.2.1.3	-	I	ko:K01897	ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920	ko00000,ko00001,ko00002,ko01000,ko01004,ko04147	long-chain-fatty acid CoA ligase
PAMIGPLM_01304	1.25e-157	-	-	-	-	-	-	-	-
PAMIGPLM_01306	1.67e-241	prs	2.7.6.1	-	F	ko:K00948	ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PAMIGPLM_01307	1.1e-180	nadD	2.7.7.18	-	H	ko:K00969	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
PAMIGPLM_01308	5.54e-131	-	-	-	-	-	-	-	-
PAMIGPLM_01309	5.01e-311	proA	1.2.1.41	-	E	ko:K00147	ko00330,ko00332,ko01100,ko01110,ko01130,ko01230,map00330,map00332,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
PAMIGPLM_01310	0.0	glyA	2.1.2.1	-	E	ko:K00600	ko00260,ko00460,ko00630,ko00670,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko01523,map00260,map00460,map00630,map00670,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map01523	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
PAMIGPLM_01311	0.0	thrC	4.2.3.1	-	E	ko:K01733	ko00260,ko00750,ko01100,ko01110,ko01120,ko01230,map00260,map00750,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Threonine synthase N terminus
PAMIGPLM_01312	2.06e-297	-	-	-	EGP	-	-	-	Transporter major facilitator family protein
PAMIGPLM_01313	6.3e-140	-	-	-	E	-	-	-	haloacid dehalogenase-like hydrolase
PAMIGPLM_01314	1.96e-222	-	-	-	G	-	-	-	Fic/DOC family
PAMIGPLM_01315	2.42e-184	-	-	-	-	-	-	-	-
PAMIGPLM_01316	9.96e-209	-	1.1.1.127	-	IQ	ko:K00065	ko00040,map00040	ko00000,ko00001,ko01000	Enoyl-(Acyl carrier protein) reductase
PAMIGPLM_01317	3.09e-215	-	-	-	S	-	-	-	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
PAMIGPLM_01318	2.43e-100	-	3.4.13.22	-	S	ko:K08641,ko:K11206	ko01502,ko02020,map01502,map02020	ko00000,ko00001,ko00002,ko01000,ko01002,ko01011,ko01504	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
PAMIGPLM_01320	1.5e-118	bcp	1.11.1.15	-	O	ko:K03564	-	ko00000,ko01000	Redoxin
PAMIGPLM_01321	0.000284	-	-	-	S	ko:K07005	-	ko00000	Pyridoxamine 5'-phosphate oxidase
PAMIGPLM_01322	3.11e-124	-	-	-	S	ko:K07005	-	ko00000	Pyridoxamine 5'-phosphate oxidase
PAMIGPLM_01323	0.0	-	-	-	S	-	-	-	Histidine phosphatase superfamily (branch 2)
PAMIGPLM_01324	9.32e-59	-	-	-	L	-	-	-	transposition
PAMIGPLM_01325	2.66e-31	-	-	-	C	-	-	-	Acetamidase/Formamidase family
PAMIGPLM_01326	5.29e-78	-	-	-	K	ko:K07979	-	ko00000,ko03000	helix_turn_helix gluconate operon transcriptional repressor
PAMIGPLM_01327	1.95e-221	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
PAMIGPLM_01328	5.5e-151	-	-	-	S	-	-	-	ABC-2 family transporter protein
PAMIGPLM_01329	4.87e-156	-	-	-	S	-	-	-	Haloacid dehalogenase-like hydrolase
PAMIGPLM_01330	0.0	recN	-	-	L	ko:K03631	-	ko00000,ko03400	May be involved in recombinational repair of damaged DNA
PAMIGPLM_01331	2.71e-228	nadK	2.7.1.23	-	H	ko:K00858	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
PAMIGPLM_01332	0.0	trkH	-	-	P	ko:K03498	-	ko00000,ko02000	Cation transport protein
PAMIGPLM_01333	1.25e-150	trkA	-	-	P	ko:K03499	-	ko00000,ko02000	TrkA-N domain
PAMIGPLM_01334	4.79e-173	tlyA	2.1.1.226, 2.1.1.227	-	J	ko:K06442	-	ko00000,ko01000,ko03009	Ribosomal RNA large subunit methyltransferase J
PAMIGPLM_01335	2.65e-246	-	-	-	G	-	-	-	Haloacid dehalogenase-like hydrolase
PAMIGPLM_01336	1.28e-215	-	-	-	L	-	-	-	Tetratricopeptide repeat
PAMIGPLM_01337	0.0	tyrS	6.1.1.1	-	J	ko:K01866	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
PAMIGPLM_01338	0.0	-	-	-	S	-	-	-	Protein of unknown function (DUF975)
PAMIGPLM_01339	1.01e-181	-	-	-	S	-	-	-	Putative ABC-transporter type IV
PAMIGPLM_01340	4.08e-123	-	-	-	S	ko:K06950	-	ko00000	Metal dependent phosphohydrolases with conserved 'HD' motif.
PAMIGPLM_01341	0.0	argH	4.3.2.1	-	E	ko:K01755	ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,map00220,map00250,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	argininosuccinate lyase
PAMIGPLM_01342	4.33e-303	argG	6.3.4.5	-	E	ko:K01940	ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,ko05418,map00220,map00250,map01100,map01110,map01130,map01230,map05418	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the argininosuccinate synthase family. Type 1 subfamily
PAMIGPLM_01343	5.46e-109	argR	-	-	K	ko:K03402	-	ko00000,ko03000	Regulates arginine biosynthesis genes
PAMIGPLM_01344	6.66e-235	argF	2.1.3.3	-	E	ko:K00611	ko00220,ko01100,ko01110,ko01130,ko01230,map00220,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
PAMIGPLM_01345	2.88e-307	argD	2.6.1.11, 2.6.1.17	-	E	ko:K00821	ko00220,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00220,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase class-III
PAMIGPLM_01346	8.32e-227	argB	2.7.2.8	-	E	ko:K00930	ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the acetylglutamate kinase family. ArgB subfamily
PAMIGPLM_01347	1.33e-273	argJ	2.3.1.1, 2.3.1.35	-	E	ko:K00620	ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
PAMIGPLM_01348	1.58e-261	argC	1.2.1.38	-	E	ko:K00145	ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
PAMIGPLM_01349	3.13e-147	-	-	-	-	-	-	-	-
PAMIGPLM_01350	0.0	pheT	6.1.1.20	-	J	ko:K01890	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Phenylalanyl-tRNA synthetase beta
PAMIGPLM_01351	9.1e-261	pheS	6.1.1.20	-	J	ko:K01889	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
PAMIGPLM_01352	7.78e-202	tsnR	-	-	J	ko:K03437	-	ko00000,ko03016	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PAMIGPLM_01353	1.28e-125	yvdD	3.2.2.10	-	S	ko:K06966	ko00230,ko00240,map00230,map00240	ko00000,ko00001,ko01000	Possible lysine decarboxylase
PAMIGPLM_01354	2.06e-25	-	-	-	-	-	-	-	-
PAMIGPLM_01356	2.76e-15	-	-	-	L	ko:K07451	-	ko00000,ko01000,ko02048	HNH endonuclease
PAMIGPLM_01357	2.27e-146	-	-	-	L	-	-	-	Uracil DNA glycosylase superfamily
PAMIGPLM_01358	1.52e-19	-	-	-	V	-	-	-	Type II restriction enzyme, methylase subunits
PAMIGPLM_01359	0.0	glnA	6.3.1.2	-	E	ko:K01915	ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727	ko00000,ko00001,ko01000,ko04147	glutamine synthetase
PAMIGPLM_01360	5.03e-183	-	-	-	S	-	-	-	Domain of unknown function (DUF4191)
PAMIGPLM_01361	7.43e-314	lpdA	1.8.1.4	-	C	ko:K00382	ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
PAMIGPLM_01362	1.66e-126	-	-	-	S	-	-	-	Protein of unknown function (DUF3043)
PAMIGPLM_01363	0.0	argE	-	-	E	-	-	-	Peptidase dimerisation domain
PAMIGPLM_01364	1.27e-186	ykoC	-	-	P	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Cobalt transport protein
PAMIGPLM_01365	0.0	ykoD	-	-	P	ko:K16785,ko:K16786,ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATPases associated with a variety of cellular activities
PAMIGPLM_01366	1.87e-109	ykoE	-	-	S	ko:K16925	-	ko00000,ko00002,ko02000	ABC-type cobalt transport system, permease component
PAMIGPLM_01367	2.77e-270	mrp	-	-	D	ko:K03593	-	ko00000,ko03029,ko03036	Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP
PAMIGPLM_01368	0.0	ligA	6.5.1.2	-	L	ko:K01972	ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430	ko00000,ko00001,ko01000,ko03032,ko03400	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
PAMIGPLM_01369	0.0	-	-	-	S	-	-	-	Tetratricopeptide repeat
PAMIGPLM_01370	0.0	-	-	-	M	-	-	-	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
PAMIGPLM_01371	0.0	-	2.8.2.22	-	S	ko:K01023	-	ko00000,ko01000	Arylsulfotransferase Ig-like domain
PAMIGPLM_01372	3.66e-185	-	-	-	P	ko:K16784	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATPases associated with a variety of cellular activities
PAMIGPLM_01373	7.28e-275	-	-	-	E	-	-	-	Aminotransferase class I and II
PAMIGPLM_01374	3.28e-181	ppgK	2.7.1.2, 2.7.1.63	-	GK	ko:K00845,ko:K00886	ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	ROK family
PAMIGPLM_01375	1.14e-254	-	-	-	S	-	-	-	Glycosyltransferase, group 2 family protein
PAMIGPLM_01377	1.11e-188	tenA	3.5.99.2	-	K	ko:K03707	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000,ko03000	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
PAMIGPLM_01378	3.73e-63	-	-	-	J	ko:K07574	-	ko00000,ko03009	CRS1_YhbY
PAMIGPLM_01379	0.0	-	-	-	GP	ko:K16785,ko:K16786,ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
PAMIGPLM_01380	2.28e-138	-	-	-	U	-	-	-	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
PAMIGPLM_01381	0.0	-	-	-	KL	-	-	-	Psort location Cytoplasmic, score 8.87
PAMIGPLM_01382	1.6e-53	pepC	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	homocysteine catabolic process
PAMIGPLM_01383	4.94e-149	-	-	-	U	ko:K10716	-	ko00000,ko02000	Ion channel
PAMIGPLM_01384	1.58e-237	-	-	-	EH	-	-	-	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
PAMIGPLM_01385	1.09e-109	dtd	-	-	J	ko:K07560	-	ko00000,ko01000,ko03016	rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
PAMIGPLM_01386	4.92e-157	-	-	-	S	-	-	-	alpha beta
PAMIGPLM_01387	1.32e-39	-	-	-	-	-	-	-	-
PAMIGPLM_01388	1.25e-238	-	-	-	L	ko:K07448	-	ko00000,ko02048	Restriction endonuclease
PAMIGPLM_01389	6.07e-26	-	-	-	S	-	-	-	KAP family P-loop domain
PAMIGPLM_01390	0.0	-	-	-	L	-	-	-	helicase
PAMIGPLM_01391	1.31e-156	-	-	-	S	-	-	-	Domain of unknown function (DUF4391)
PAMIGPLM_01392	7.39e-288	mod	2.1.1.72	-	L	ko:K07316	-	ko00000,ko01000,ko02048	DNA methylase
PAMIGPLM_01393	0.0	res	3.1.21.5	-	V	ko:K01156	-	ko00000,ko01000,ko02048	Type III restriction enzyme, res subunit
PAMIGPLM_01394	3.3e-70	-	-	-	S	-	-	-	MTH538 TIR-like domain (DUF1863)
PAMIGPLM_01395	3.31e-163	-	-	-	-	-	-	-	-
PAMIGPLM_01396	5.44e-103	-	-	-	V	-	-	-	Abi-like protein
PAMIGPLM_01398	6.44e-90	-	-	-	-	-	-	-	-
PAMIGPLM_01399	1.53e-271	-	-	-	-	-	-	-	-
PAMIGPLM_01400	1.03e-191	-	-	-	S	-	-	-	phosphoesterase or phosphohydrolase
PAMIGPLM_01401	9.45e-97	-	4.1.1.44	-	S	ko:K01607	ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220	ko00000,ko00001,ko01000	Cupin domain
PAMIGPLM_01402	5.74e-212	-	1.1.1.91	-	C	ko:K05882	-	ko00000,ko01000	Aldo/keto reductase family
PAMIGPLM_01403	1.87e-64	-	-	-	C	-	-	-	Flavodoxin
PAMIGPLM_01405	4.32e-202	-	2.7.13.3	-	T	ko:K07675	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
PAMIGPLM_01406	1.63e-156	-	-	-	K	-	-	-	helix_turn_helix, Lux Regulon
PAMIGPLM_01407	0.0	-	-	-	KLT	-	-	-	Lanthionine synthetase C-like protein
PAMIGPLM_01408	1.34e-177	-	3.6.3.44	-	V	ko:K06147,ko:K18104	ko01501,ko02010,map01501,map02010	ko00000,ko00001,ko00002,ko01000,ko01504,ko02000	ABC transporter
PAMIGPLM_01409	3.02e-202	-	3.6.3.44	-	V	ko:K18104	ko01501,ko02010,map01501,map02010	ko00000,ko00001,ko00002,ko01000,ko01504,ko02000	ABC transporter transmembrane region
PAMIGPLM_01410	5.88e-202	-	-	-	O	-	-	-	Thioredoxin
PAMIGPLM_01411	4.13e-166	-	-	-	E	-	-	-	Psort location Cytoplasmic, score 8.87
PAMIGPLM_01412	6.54e-169	-	-	-	S	-	-	-	DUF218 domain
PAMIGPLM_01413	2.43e-301	tig	-	-	D	ko:K03545	-	ko00000	Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
PAMIGPLM_01414	9.85e-299	rnd	3.1.13.5	-	J	ko:K03684	-	ko00000,ko01000,ko03016	3'-5' exonuclease
PAMIGPLM_01415	1.34e-101	-	-	-	S	-	-	-	Protein of unknown function (DUF3000)
PAMIGPLM_01416	1.76e-210	pflA	1.97.1.4	-	C	ko:K04069	-	ko00000,ko01000	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PAMIGPLM_01417	0.0	pflB	2.3.1.54	-	C	ko:K00656	ko00620,ko00640,ko00650,ko01100,ko01120,map00620,map00640,map00650,map01100,map01120	ko00000,ko00001,ko01000	Pyruvate formate lyase-like
PAMIGPLM_01418	1.28e-41	-	-	-	-	-	-	-	-
PAMIGPLM_01419	0.0	nadE	6.3.5.1	-	H	ko:K01950	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
PAMIGPLM_01420	6.43e-286	-	-	-	S	-	-	-	Peptidase dimerisation domain
PAMIGPLM_01421	3.32e-200	-	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
PAMIGPLM_01422	9e-192	metQ	-	-	P	ko:K02073	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	NLPA lipoprotein
PAMIGPLM_01423	4.13e-188	metN	-	-	P	ko:K02071	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
PAMIGPLM_01424	1.59e-144	metI	-	-	P	ko:K02072	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PAMIGPLM_01425	1.03e-96	-	-	-	-	-	-	-	-
PAMIGPLM_01427	4.75e-160	-	-	-	V	-	-	-	Abi-like protein
PAMIGPLM_01428	4.25e-26	-	-	-	V	-	-	-	Abi-like protein
PAMIGPLM_01429	8.7e-162	-	-	-	L	ko:K07497	-	ko00000	Integrase core domain
PAMIGPLM_01430	7.15e-94	-	-	-	L	-	-	-	Helix-turn-helix domain
PAMIGPLM_01432	0.0	-	-	-	S	-	-	-	LPXTG-motif cell wall anchor domain protein
PAMIGPLM_01433	3.19e-312	dinF	-	-	V	-	-	-	MatE
PAMIGPLM_01434	1.53e-303	intA	-	-	L	-	-	-	Phage integrase family
PAMIGPLM_01435	3.67e-48	mod	2.1.1.72	-	L	ko:K07316	-	ko00000,ko01000,ko02048	DNA methylase
PAMIGPLM_01436	1.44e-228	-	-	-	S	-	-	-	Fic/DOC family
PAMIGPLM_01437	1.03e-85	-	-	-	-	-	-	-	-
PAMIGPLM_01438	7.5e-86	-	-	-	-	-	-	-	-
PAMIGPLM_01439	0.0	-	5.99.1.2	-	L	ko:K03169	-	ko00000,ko01000,ko03032	DNA topoisomerase
PAMIGPLM_01440	2.93e-77	-	-	-	-	-	-	-	-
PAMIGPLM_01443	1.84e-59	-	-	-	S	-	-	-	Domain of unknown function (DUF4160)
PAMIGPLM_01444	1.44e-55	-	-	-	K	-	-	-	Protein of unknown function (DUF2442)
PAMIGPLM_01445	7.56e-58	-	-	-	S	-	-	-	Bacterial mobilisation protein (MobC)
PAMIGPLM_01446	0.0	-	-	-	U	-	-	-	Relaxase/Mobilisation nuclease domain
PAMIGPLM_01447	6.12e-220	-	-	-	S	-	-	-	Protein of unknown function (DUF3801)
PAMIGPLM_01449	3.75e-49	-	-	-	-	-	-	-	-
PAMIGPLM_01450	0.0	-	-	-	KL	-	-	-	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
PAMIGPLM_01451	9.05e-50	-	-	-	-	-	-	-	-
PAMIGPLM_01452	8.3e-45	-	-	-	-	-	-	-	-
PAMIGPLM_01453	0.0	-	-	-	U	ko:K03205	ko03070,map03070	ko00000,ko00001,ko00002,ko02044	Type IV secretory system Conjugative DNA transfer
PAMIGPLM_01454	2.37e-184	-	-	-	-	ko:K03646	-	ko00000,ko02000	-
PAMIGPLM_01455	6.88e-125	-	-	-	-	-	-	-	-
PAMIGPLM_01456	0.0	-	-	-	M	-	-	-	CHAP domain
PAMIGPLM_01457	0.0	-	-	-	U	-	-	-	type IV secretory pathway VirB4
PAMIGPLM_01458	7.19e-83	-	-	-	S	-	-	-	PrgI family protein
PAMIGPLM_01459	1.95e-186	-	-	-	-	-	-	-	-
PAMIGPLM_01460	3.75e-36	-	-	-	-	-	-	-	-
PAMIGPLM_01462	0.0	-	-	-	D	-	-	-	Cell surface antigen C-terminus
PAMIGPLM_01463	5.66e-103	-	-	-	-	ko:K03646	-	ko00000,ko02000	-
PAMIGPLM_01465	3.6e-46	-	-	-	-	-	-	-	-
PAMIGPLM_01466	1.61e-147	-	-	-	D	ko:K03496	-	ko00000,ko03036,ko04812	AAA domain
PAMIGPLM_01467	1.37e-115	-	-	-	S	-	-	-	Transcription factor WhiB
PAMIGPLM_01468	4.08e-56	-	-	-	-	-	-	-	-
PAMIGPLM_01469	2.85e-265	-	-	-	S	-	-	-	Helix-turn-helix domain
PAMIGPLM_01470	2.63e-22	-	-	-	-	-	-	-	-
PAMIGPLM_01471	5.51e-38	-	-	-	-	-	-	-	-
PAMIGPLM_01473	2.45e-86	-	-	-	-	-	-	-	-
PAMIGPLM_01474	2.05e-191	ppiA	5.2.1.8	-	G	ko:K03767,ko:K03768	ko01503,ko04217,map01503,map04217	ko00000,ko00001,ko01000,ko03110,ko04147	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
PAMIGPLM_01475	0.0	relA	2.7.6.5, 3.1.7.2	-	KT	ko:K00951,ko:K01139	ko00230,map00230	ko00000,ko00001,ko01000,ko03009	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
PAMIGPLM_01476	5.02e-110	dut	3.6.1.23	-	F	ko:K01520	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA
PAMIGPLM_01477	8.5e-63	-	-	-	S	-	-	-	Domain of unknown function (DUF4193)
PAMIGPLM_01478	1.37e-228	-	-	-	S	-	-	-	Protein of unknown function (DUF3071)
PAMIGPLM_01479	1.45e-299	-	-	-	S	-	-	-	Type I phosphodiesterase / nucleotide pyrophosphatase
PAMIGPLM_01480	0.0	gyrA2	5.99.1.3	-	L	ko:K02469	-	ko00000,ko01000,ko03032,ko03400	DNA topoisomerase (ATP-hydrolyzing)
PAMIGPLM_01481	0.0	lhr	-	-	L	ko:K03724	-	ko00000,ko01000,ko03400	DEAD DEAH box helicase
PAMIGPLM_01482	6.21e-43	-	-	-	K	ko:K07727	-	ko00000,ko03000	Cro/C1-type HTH DNA-binding domain
PAMIGPLM_01483	1.3e-101	-	-	-	S	-	-	-	Protein of unknown function (DUF2975)
PAMIGPLM_01484	1.27e-308	-	-	-	T	-	-	-	Domain of unknown function (DUF4173)
PAMIGPLM_01485	4.22e-287	-	-	-	G	-	-	-	Major Facilitator Superfamily
PAMIGPLM_01486	0.0	gyrB2	5.99.1.3	-	L	ko:K02470	-	ko00000,ko01000,ko03032,ko03400	DNA topoisomerase (ATP-hydrolyzing)
PAMIGPLM_01487	3.32e-226	sigA	-	-	K	ko:K03086	-	ko00000,ko03021	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
PAMIGPLM_01488	2.58e-152	-	-	-	-	-	-	-	-
PAMIGPLM_01489	3.13e-252	idsA	2.5.1.1, 2.5.1.10, 2.5.1.29	-	H	ko:K13787	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko01006	Belongs to the FPP GGPP synthase family
PAMIGPLM_01490	0.0	pknL	2.7.11.1	-	KLT	ko:K08884,ko:K12132	-	ko00000,ko01000,ko01001	PASTA
PAMIGPLM_01491	8.73e-171	plsC2	2.3.1.51	-	I	ko:K00655	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Phosphate acyltransferases
PAMIGPLM_01492	2.6e-128	-	-	-	-	-	-	-	-
PAMIGPLM_01493	9.25e-247	trpD	2.4.2.18	-	F	ko:K00766	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
PAMIGPLM_01494	0.0	secA	-	-	U	ko:K03070	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
PAMIGPLM_01495	5.45e-153	hpf	-	-	J	ko:K05808	-	ko00000,ko03009	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
PAMIGPLM_01496	1.56e-160	recX	-	-	S	ko:K03565	-	ko00000,ko03400	Modulates RecA activity
PAMIGPLM_01497	4.97e-271	recA	-	-	L	ko:K03553	ko03440,map03440	ko00000,ko00001,ko00002,ko03400	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
PAMIGPLM_01498	7.07e-61	-	-	-	S	-	-	-	Protein of unknown function (DUF3046)
PAMIGPLM_01499	3.83e-104	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
PAMIGPLM_01500	7.04e-127	cinA	3.5.1.42	-	S	ko:K03743	ko00760,map00760	ko00000,ko00001,ko01000	Belongs to the CinA family
PAMIGPLM_01501	1.29e-159	pgsA	2.7.8.41, 2.7.8.5	-	I	ko:K00995,ko:K08744	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
PAMIGPLM_01502	0.0	ftsK	-	-	D	ko:K03466	-	ko00000,ko03036	FtsK SpoIIIE family protein
PAMIGPLM_01503	3.76e-245	miaA	2.5.1.75	-	F	ko:K00791	ko00908,ko01100,ko01110,map00908,map01100,map01110	ko00000,ko00001,ko01000,ko01006,ko03016	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
PAMIGPLM_01504	0.0	miaB	2.8.4.3	-	H	ko:K06168	-	ko00000,ko01000,ko03016	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
PAMIGPLM_01505	6.96e-201	ywaC	2.7.6.5	-	S	ko:K07816	ko00230,map00230	ko00000,ko00001,ko01000	Region found in RelA / SpoT proteins
PAMIGPLM_01506	6.83e-228	-	-	-	EG	-	-	-	EamA-like transporter family
PAMIGPLM_01507	2.77e-168	-	-	-	S	ko:K06890	-	ko00000	Belongs to the BI1 family
PAMIGPLM_01508	3.16e-144	-	-	-	S	-	-	-	Domain of unknown function (DUF5067)
PAMIGPLM_01509	3.12e-310	-	-	-	T	-	-	-	Histidine kinase
PAMIGPLM_01510	8.7e-166	-	-	-	K	-	-	-	helix_turn_helix, Lux Regulon
PAMIGPLM_01511	0.0	-	-	-	S	-	-	-	Protein of unknown function DUF262
PAMIGPLM_01512	7.7e-149	-	-	-	K	-	-	-	helix_turn_helix, Lux Regulon
PAMIGPLM_01513	7.72e-313	-	-	-	T	-	-	-	Histidine kinase
PAMIGPLM_01514	6.99e-242	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
PAMIGPLM_01515	1.48e-287	-	-	-	V	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 family transporter protein
PAMIGPLM_01516	2.39e-293	-	-	-	V	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 family transporter protein
PAMIGPLM_01517	4.22e-271	-	-	-	K	-	-	-	helix_turn_helix, arabinose operon control protein
PAMIGPLM_01518	5.47e-151	-	2.3.1.18, 2.3.1.79	-	S	ko:K00633,ko:K00661	-	ko00000,ko01000	Bacterial transferase hexapeptide repeat protein
PAMIGPLM_01519	0.0	-	-	-	V	-	-	-	Psort location CytoplasmicMembrane, score 9.99
PAMIGPLM_01520	0.0	acnA	4.2.1.3	-	C	ko:K01681	ko00020,ko00630,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
PAMIGPLM_01521	0.0	ctpE	-	-	P	ko:K12952	-	ko00000,ko01000	E1-E2 ATPase
PAMIGPLM_01522	2.14e-98	-	-	-	-	-	-	-	-
PAMIGPLM_01523	5.58e-309	rumA	2.1.1.190	-	J	ko:K03215	-	ko00000,ko01000,ko03009	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PAMIGPLM_01524	1.09e-171	-	-	-	S	-	-	-	Protein of unknown function (DUF3159)
PAMIGPLM_01525	3.66e-194	-	-	-	S	-	-	-	Protein of unknown function (DUF3710)
PAMIGPLM_01526	1.67e-219	xth	3.1.11.2	-	L	ko:K01142	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Endonuclease/Exonuclease/phosphatase family
PAMIGPLM_01527	0.0	-	-	-	EP	ko:K02031,ko:K02032	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Oligopeptide/dipeptide transporter, C-terminal region
PAMIGPLM_01528	1.43e-224	dppC	-	-	EP	ko:K02034,ko:K15582	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	N-terminal TM domain of oligopeptide transport permease C
PAMIGPLM_01529	1.45e-206	dppB	-	-	EP	ko:K02033,ko:K15581	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PAMIGPLM_01530	0.0	dppA	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substrate-binding protein, family 5
PAMIGPLM_01531	0.0	dppA	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substrate-binding protein, family 5
PAMIGPLM_01532	2.28e-219	xerC	-	-	D	ko:K03733,ko:K04763	-	ko00000,ko03036	Belongs to the 'phage' integrase family. XerC subfamily
PAMIGPLM_01534	2.11e-46	-	-	-	-	-	-	-	-
PAMIGPLM_01535	2.11e-250	tyrA	1.3.1.12	-	E	ko:K00210,ko:K04517	ko00400,ko00401,ko01100,ko01110,ko01130,ko01230,map00400,map00401,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Prephenate dehydrogenase
PAMIGPLM_01536	2.64e-243	pheA	4.2.1.51, 5.4.99.5	-	E	ko:K04518,ko:K14170	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Prephenate dehydratase
PAMIGPLM_01537	1.43e-135	-	-	-	-	-	-	-	-
PAMIGPLM_01538	0.0	typA	-	-	T	ko:K06207	-	ko00000	Elongation factor G C-terminus
PAMIGPLM_01539	0.0	nanT	-	-	U	ko:K03290,ko:K08178,ko:K08369	-	ko00000,ko02000	Sugar (and other) transporter
PAMIGPLM_01540	6.41e-193	-	3.6.1.55	-	F	ko:K03574	-	ko00000,ko01000,ko03400	NUDIX hydrolase
PAMIGPLM_01541	8.39e-196	soj	-	-	D	ko:K03496	-	ko00000,ko03036,ko04812	CobQ CobB MinD ParA nucleotide binding domain protein
PAMIGPLM_01542	2.47e-223	xerD	-	-	D	ko:K03733,ko:K04763	-	ko00000,ko03036	recombinase XerD
PAMIGPLM_01543	7.76e-81	rplT	-	-	J	ko:K02887	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
PAMIGPLM_01544	3.31e-35	rpmI	-	-	J	ko:K02916	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L35
PAMIGPLM_01545	1.86e-139	infC	-	-	J	ko:K02520	-	ko00000,ko03012,ko03029	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
PAMIGPLM_01546	2.3e-142	-	2.7.6.2	-	H	ko:K00949	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000	Thiamin pyrophosphokinase, vitamin B1 binding domain
PAMIGPLM_01547	4.82e-254	gap	1.2.1.12	-	G	ko:K00134	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
PAMIGPLM_01548	2.34e-113	ybaK	-	-	J	ko:K03976	-	ko00000,ko01000,ko03016	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
PAMIGPLM_01549	1.88e-219	ispH	1.17.7.4	-	IM	ko:K03527	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
PAMIGPLM_01550	5.29e-238	-	5.1.3.3	-	G	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Aldose 1-epimerase
PAMIGPLM_01551	1.25e-49	-	-	-	-	-	-	-	-
PAMIGPLM_01552	6.43e-126	sigH	-	-	K	ko:K03088	-	ko00000,ko03021	Belongs to the sigma-70 factor family. ECF subfamily
PAMIGPLM_01553	0.0	murE	6.3.2.13	-	M	ko:K01928	ko00300,ko00550,map00300,map00550	ko00000,ko00001,ko01000,ko01011	Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
PAMIGPLM_01554	1.11e-238	-	-	-	V	-	-	-	Acetyltransferase (GNAT) domain
PAMIGPLM_01555	0.0	folC	6.3.2.12, 6.3.2.17	-	H	ko:K11754	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	Mur ligase middle domain
PAMIGPLM_01556	0.0	pepP	3.4.11.9	-	E	ko:K01262	-	ko00000,ko01000,ko01002	Aminopeptidase P, N-terminal domain
PAMIGPLM_01557	5.94e-123	-	-	-	F	-	-	-	NUDIX domain
PAMIGPLM_01558	0.0	-	-	-	P	ko:K02031,ko:K02032	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
PAMIGPLM_01559	5.18e-255	dppC	-	-	EP	ko:K02034	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PAMIGPLM_01560	1.64e-242	dppB	-	-	EP	ko:K02033	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PAMIGPLM_01561	0.0	-	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding proteins, family 5 Middle
PAMIGPLM_01562	3.68e-276	-	2.7.1.2	-	GK	ko:K00845	ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	ROK family
PAMIGPLM_01563	4.74e-212	-	2.7.1.4	-	G	ko:K00847	ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100	ko00000,ko00001,ko01000	pfkB family carbohydrate kinase
PAMIGPLM_01564	2.39e-277	-	-	-	S	ko:K09704	-	ko00000	Metal-independent alpha-mannosidase (GH125)
PAMIGPLM_01566	4.11e-314	-	-	-	G	-	-	-	N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase)
PAMIGPLM_01567	2.39e-182	ftsQ	-	-	D	ko:K03589	ko04112,map04112	ko00000,ko00001,ko03036	Cell division protein FtsQ
PAMIGPLM_01568	0.0	murC	6.3.2.8	-	M	ko:K01924	ko00471,ko00550,ko01100,map00471,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Belongs to the MurCDEF family
PAMIGPLM_01569	1.05e-273	murG	2.4.1.227, 6.3.2.8	GT28	M	ko:K01924,ko:K02563	ko00471,ko00550,ko01100,ko01502,ko04112,map00471,map00550,map01100,map01502,map04112	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
PAMIGPLM_01570	4.97e-259	ftsW	2.4.1.227	GT28	D	ko:K02563,ko:K03588	ko00550,ko01100,ko01502,ko04112,map00550,map01100,map01502,map04112	ko00000,ko00001,ko01000,ko01011,ko02000,ko03036	Belongs to the SEDS family
PAMIGPLM_01571	0.0	murD	6.3.2.9	-	M	ko:K01925	ko00471,ko00550,ko01100,map00471,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
PAMIGPLM_01572	1.38e-251	mraY	2.7.8.13	-	M	ko:K01000	ko00550,ko01100,ko01502,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
PAMIGPLM_01573	0.0	murF	6.3.2.10	-	M	ko:K01929	ko00300,ko00550,ko01100,ko01502,map00300,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
PAMIGPLM_01574	2.91e-198	-	-	-	M	-	-	-	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
PAMIGPLM_01575	0.0	ftsI	3.4.16.4	-	M	ko:K03587	ko00550,ko01501,map00550,map01501	ko00000,ko00001,ko01000,ko01011,ko03036	Penicillin-binding protein, transpeptidase domain protein
PAMIGPLM_01576	2.08e-81	-	-	-	D	-	-	-	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
PAMIGPLM_01577	1.41e-242	rsmH	2.1.1.199	-	J	ko:K03438	-	ko00000,ko01000,ko03009	Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
PAMIGPLM_01578	9.51e-119	mraZ	-	-	K	ko:K03925	-	ko00000	Belongs to the MraZ family
PAMIGPLM_01579	0.0	-	-	-	L	-	-	-	DNA helicase
PAMIGPLM_01580	1.19e-276	serA	1.1.1.399, 1.1.1.95	-	EH	ko:K00058	ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
PAMIGPLM_01581	1.01e-109	nrdR	-	-	K	ko:K07738	-	ko00000,ko03000	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
PAMIGPLM_01582	3.61e-71	-	-	-	M	-	-	-	Lysin motif
PAMIGPLM_01583	6.88e-170	lexA	3.4.21.88	-	K	ko:K01356	-	ko00000,ko00002,ko01000,ko01002,ko03400	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
PAMIGPLM_01584	3.34e-192	czcD	-	-	P	ko:K16264	-	ko00000,ko02000	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
PAMIGPLM_01585	3.25e-225	ldh	1.1.1.27, 1.1.1.37	-	C	ko:K00016,ko:K00024	ko00010,ko00020,ko00270,ko00620,ko00630,ko00640,ko00680,ko00710,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko04922,map00010,map00020,map00270,map00620,map00630,map00640,map00680,map00710,map00720,map01100,map01110,map01120,map01130,map01200,map04922	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the LDH MDH superfamily. LDH family
PAMIGPLM_01586	0.0	hflX	-	-	S	ko:K03665	-	ko00000,ko03009	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
PAMIGPLM_01587	1.62e-145	rsmC	2.1.1.172	-	J	ko:K00564	-	ko00000,ko01000,ko03009	Ribosomal protein L11 methyltransferase (PrmA)
PAMIGPLM_01588	0.0	hrpA	3.6.4.13	-	L	ko:K03578	-	ko00000,ko01000	Helicase associated domain (HA2) Add an annotation
PAMIGPLM_01589	4.73e-244	-	-	-	-	-	-	-	-
PAMIGPLM_01590	1.22e-197	-	-	-	V	-	-	-	N-Acetylmuramoyl-L-alanine amidase
PAMIGPLM_01591	7.96e-150	-	-	-	-	-	-	-	-
PAMIGPLM_01592	2.51e-152	-	-	-	V	ko:K02003,ko:K09810	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATPases associated with a variety of cellular activities
PAMIGPLM_01593	6.36e-280	-	-	-	EGP	ko:K18567,ko:K19577	-	ko00000,ko02000	Major Facilitator Superfamily
PAMIGPLM_01594	1.59e-183	-	-	-	M	-	-	-	Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses
PAMIGPLM_01595	9.41e-297	-	-	-	S	-	-	-	Domain of unknown function (DUF5067)
PAMIGPLM_01596	0.0	glnA2	6.3.1.2	-	E	ko:K01915	ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727	ko00000,ko00001,ko01000,ko04147	glutamine synthetase
PAMIGPLM_01597	2.38e-167	hisA	5.3.1.16, 5.3.1.24	-	E	ko:K01814,ko:K01817	ko00340,ko00400,ko01100,ko01110,ko01130,ko01230,map00340,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Histidine biosynthesis protein
PAMIGPLM_01598	1.77e-156	hisH	-	-	E	ko:K02501	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
PAMIGPLM_01599	9.72e-162	-	-	-	-	-	-	-	-
PAMIGPLM_01600	4.56e-142	hisB	3.1.3.15, 4.2.1.19	-	E	ko:K01089,ko:K01693	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Imidazoleglycerol-phosphate dehydratase
PAMIGPLM_01601	1.36e-287	hisC	2.6.1.9	-	E	ko:K00817	ko00340,ko00350,ko00360,ko00400,ko00401,ko00960,ko01100,ko01110,ko01130,ko01230,map00340,map00350,map00360,map00400,map00401,map00960,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
PAMIGPLM_01602	0.0	hisD	1.1.1.23	-	E	ko:K00013	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
PAMIGPLM_01603	0.0	dnaE	2.7.7.7	-	L	ko:K02337	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III alpha subunit
PAMIGPLM_01604	1.43e-224	rluD	5.4.99.23	-	J	ko:K06180	-	ko00000,ko01000,ko03009	Responsible for synthesis of pseudouridine from uracil
PAMIGPLM_01605	1.33e-120	lspA	3.4.23.36	-	MU	ko:K03101	ko03060,map03060	ko00000,ko00001,ko01000,ko01002	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
PAMIGPLM_01606	5.08e-64	-	-	-	V	-	-	-	DivIVA protein
PAMIGPLM_01607	9.14e-55	-	-	-	S	ko:K02221	-	ko00000,ko02044	YGGT family
PAMIGPLM_01608	5.84e-105	sepF	-	-	D	ko:K09772	-	ko00000,ko03036	Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
PAMIGPLM_01609	4.66e-279	ftsZ	-	-	D	ko:K03531	ko04112,map04112	ko00000,ko00001,ko02048,ko03036,ko04812	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
PAMIGPLM_01610	1.31e-310	dus	-	-	J	-	-	-	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PAMIGPLM_01611	0.0	glyQS	6.1.1.14	-	J	ko:K01880	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Catalyzes the attachment of glycine to tRNA(Gly)
PAMIGPLM_01612	3.3e-137	-	-	-	S	ko:K02664	-	ko00000,ko02035,ko02044	Pilus assembly protein, PilO
PAMIGPLM_01613	6.91e-212	-	-	-	NU	-	-	-	PFAM Fimbrial assembly family protein
PAMIGPLM_01614	5.34e-245	pilM	-	-	NU	ko:K02662	-	ko00000,ko02035,ko02044	Type IV pilus assembly protein PilM;
PAMIGPLM_01615	5.43e-195	pppA	3.4.23.43	-	NOU	ko:K02654	-	ko00000,ko00002,ko01000,ko01002,ko02035,ko02044	Bacterial Peptidase A24 N-terminal domain
PAMIGPLM_01616	0.0	-	-	-	-	-	-	-	-
PAMIGPLM_01617	4.3e-294	tapC	-	-	U	ko:K02653	-	ko00000,ko02035,ko02044	Type II secretion system (T2SS), protein F
PAMIGPLM_01618	2.3e-51	-	-	-	NU	ko:K02650	ko02020,map02020	ko00000,ko00001,ko02035,ko02044	Prokaryotic N-terminal methylation motif
PAMIGPLM_01619	5.17e-134	-	-	-	S	-	-	-	Prokaryotic N-terminal methylation motif
PAMIGPLM_01620	6.86e-175	-	-	-	NU	ko:K02671	-	ko00000,ko02035,ko02044	Prokaryotic N-terminal methylation motif
PAMIGPLM_01621	0.0	pilB	-	-	NU	ko:K02652	-	ko00000,ko02035,ko02044	Type II/IV secretion system protein
PAMIGPLM_01622	0.0	pilT	-	-	NU	ko:K02669	-	ko00000,ko02035,ko02044	Type II/IV secretion system protein
PAMIGPLM_01623	0.0	-	-	-	-	-	-	-	-
PAMIGPLM_01624	4.66e-198	thiM	2.7.1.50	-	H	ko:K00878	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
PAMIGPLM_01625	1.58e-170	thiE	2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17	-	H	ko:K03147,ko:K14153	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)
PAMIGPLM_01626	4.31e-194	thiD	2.7.1.49, 2.7.4.7	-	H	ko:K00941	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Phosphomethylpyrimidine kinase
PAMIGPLM_01627	3.37e-79	-	-	-	S	-	-	-	Thiamine-binding protein
PAMIGPLM_01628	1.86e-246	-	-	-	K	ko:K02529	-	ko00000,ko03000	helix_turn _helix lactose operon repressor
PAMIGPLM_01629	8.93e-307	lacY	-	-	P	ko:K02532	-	ko00000,ko02000	LacY proton/sugar symporter
PAMIGPLM_01630	0.0	fosC	3.2.1.26	GH32	G	ko:K01193	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 32 family
PAMIGPLM_01631	4.99e-190	-	-	-	P	-	-	-	Binding-protein-dependent transport system inner membrane component
PAMIGPLM_01632	4.99e-262	-	-	-	P	-	-	-	NMT1/THI5 like
PAMIGPLM_01633	1.89e-293	-	-	-	F	-	-	-	nucleoside hydrolase
PAMIGPLM_01634	8.46e-197	uppS	2.5.1.31, 2.5.1.86, 2.5.1.88	-	H	ko:K00806,ko:K14215,ko:K21273	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
PAMIGPLM_01635	4.14e-173	recO	-	-	L	ko:K03584	ko03440,map03440	ko00000,ko00001,ko03400	Involved in DNA repair and RecF pathway recombination
PAMIGPLM_01636	0.0	-	-	-	I	-	-	-	acetylesterase activity
PAMIGPLM_01637	5.54e-286	ispG	1.17.7.1, 1.17.7.3	-	I	ko:K03526	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
PAMIGPLM_01638	1.93e-267	dxr	1.1.1.267	-	I	ko:K00099	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP)
PAMIGPLM_01639	0.0	-	-	-	NU	-	-	-	Tfp pilus assembly protein FimV
PAMIGPLM_01641	1.95e-271	-	-	-	L	-	-	-	Phage integrase family
PAMIGPLM_01642	8.91e-12	-	-	-	-	-	-	-	-
PAMIGPLM_01646	4.95e-162	-	-	-	K	-	-	-	DNA binding
PAMIGPLM_01647	1.39e-22	-	-	-	-	-	-	-	-
PAMIGPLM_01648	8.08e-90	-	-	-	V	-	-	-	Ami_2
PAMIGPLM_01655	1.01e-20	-	-	-	MU	-	-	-	outer membrane autotransporter barrel domain protein
PAMIGPLM_01656	9.32e-194	-	-	-	L	-	-	-	DNA integration
PAMIGPLM_01657	8.88e-47	-	-	-	-	-	-	-	-
PAMIGPLM_01658	3.23e-108	-	-	-	-	-	-	-	-
PAMIGPLM_01660	2.57e-307	-	-	-	S	-	-	-	Psort location Cytoplasmic, score
PAMIGPLM_01661	9.73e-193	-	-	-	-	-	-	-	-
PAMIGPLM_01662	0.0	-	-	-	S	-	-	-	Phage-related minor tail protein
PAMIGPLM_01664	4.84e-102	-	-	-	-	-	-	-	-
PAMIGPLM_01665	3.17e-113	-	-	-	-	-	-	-	-
PAMIGPLM_01666	6.92e-87	-	-	-	-	-	-	-	-
PAMIGPLM_01667	1.27e-65	-	-	-	-	-	-	-	-
PAMIGPLM_01668	1.05e-70	-	-	-	-	-	-	-	-
PAMIGPLM_01671	0.000149	-	-	-	-	-	-	-	-
PAMIGPLM_01672	5.53e-152	-	-	-	-	-	-	-	-
PAMIGPLM_01674	1.07e-84	-	-	-	-	-	-	-	-
PAMIGPLM_01675	1.92e-200	-	-	-	S	-	-	-	Phage portal protein, SPP1 Gp6-like
PAMIGPLM_01676	0.0	-	-	-	S	-	-	-	Terminase
PAMIGPLM_01677	1.01e-82	-	-	-	-	-	-	-	-
PAMIGPLM_01679	1.35e-112	-	-	-	-	-	-	-	-
PAMIGPLM_01680	4.79e-21	-	-	-	-	-	-	-	-
PAMIGPLM_01682	1.28e-40	-	-	-	S	-	-	-	Protein of unknwon function (DUF3310)
PAMIGPLM_01685	9.3e-140	-	-	-	-	-	-	-	-
PAMIGPLM_01688	1.62e-50	-	-	-	-	-	-	-	-
PAMIGPLM_01689	1.43e-95	-	-	-	-	-	-	-	-
PAMIGPLM_01690	2.47e-85	-	-	-	-	-	-	-	-
PAMIGPLM_01692	1.63e-92	ssb	-	-	L	ko:K03111	ko03030,ko03430,ko03440,map03030,map03430,map03440	ko00000,ko00001,ko03029,ko03032,ko03400	Single-strand binding protein family
PAMIGPLM_01693	1.32e-91	-	-	-	L	ko:K07455	-	ko00000,ko03400	RecT family
PAMIGPLM_01694	1.5e-103	-	-	-	L	-	-	-	YqaJ-like viral recombinase domain
PAMIGPLM_01698	0.000289	-	-	-	S	-	-	-	Helix-turn-helix domain
PAMIGPLM_01699	1.65e-159	-	-	-	K	ko:K07741	-	ko00000	BRO family, N-terminal domain
PAMIGPLM_01700	2.41e-26	-	-	-	S	-	-	-	Pentapeptide repeats (9 copies)
PAMIGPLM_01701	3.5e-19	-	-	-	-	-	-	-	-
PAMIGPLM_01702	9.04e-34	-	-	-	-	-	-	-	-
PAMIGPLM_01708	3.49e-59	-	-	-	-	-	-	-	-
PAMIGPLM_01709	4.1e-39	-	-	-	-	-	-	-	-
PAMIGPLM_01710	8.18e-164	-	-	-	-	-	-	-	-
PAMIGPLM_01711	5.2e-113	-	-	-	-	-	-	-	-
PAMIGPLM_01712	3.68e-97	-	-	-	S	-	-	-	Protein of unknown function (DUF3052)
PAMIGPLM_01713	9.98e-197	sdrC	-	-	T	ko:K07177	ko02024,map02024	ko00000,ko00001,ko01002	Belongs to the peptidase S16 family
PAMIGPLM_01714	0.0	-	-	-	S	-	-	-	Zincin-like metallopeptidase
PAMIGPLM_01715	0.0	uvrD2	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	DNA helicase
PAMIGPLM_01716	0.0	mphA	-	-	S	-	-	-	Aminoglycoside phosphotransferase
PAMIGPLM_01717	4.61e-44	-	-	-	S	-	-	-	Protein of unknown function (DUF3107)
PAMIGPLM_01718	4.79e-221	PPA1328	3.1.3.97, 3.1.4.57	-	S	ko:K07053,ko:K20859	ko00440,map00440	ko00000,ko00001,ko01000	DNA polymerase alpha chain like domain
PAMIGPLM_01719	5.01e-150	-	-	-	S	-	-	-	Vitamin K epoxide reductase
PAMIGPLM_01720	1.8e-216	dapF	5.1.1.7	-	E	ko:K01778	ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine
PAMIGPLM_01721	1.07e-186	murI	5.1.1.3	-	M	ko:K01776	ko00471,ko01100,map00471,map01100	ko00000,ko00001,ko01000,ko01011	Provides the (R)-glutamate required for cell wall biosynthesis
PAMIGPLM_01722	1.5e-29	-	-	-	S	ko:K07001	-	ko00000	lipid catabolic process
PAMIGPLM_01723	0.0	dppA	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substrate-binding protein, family 5
PAMIGPLM_01724	8.65e-226	iaaA	3.4.19.5	-	E	ko:K13051	-	ko00000,ko01000,ko01002	Asparaginase
PAMIGPLM_01725	1.92e-199	-	-	-	S	-	-	-	Patatin-like phospholipase
PAMIGPLM_01726	1.77e-238	-	-	-	K	-	-	-	LysR substrate binding domain protein
PAMIGPLM_01727	1.35e-306	-	4.4.1.8	-	E	ko:K00842,ko:K14155	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko01000,ko01007	Aminotransferase, class I II
PAMIGPLM_01728	3.92e-150	-	-	-	S	ko:K06999	-	ko00000	Phospholipase/Carboxylesterase
PAMIGPLM_01729	3.88e-108	-	-	-	-	-	-	-	-
PAMIGPLM_01730	2.07e-14	cas2	-	-	L	ko:K09951	-	ko00000,ko02048	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
PAMIGPLM_01731	0.0	cas1	-	-	L	ko:K15342	-	ko00000,ko02048,ko03400	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
PAMIGPLM_01732	3.24e-117	-	-	-	-	ko:K19133	-	ko00000,ko02048	-
PAMIGPLM_01733	3.83e-256	cas3	-	-	L	ko:K07012	-	ko00000,ko01000,ko02048	CRISPR-associated helicase Cas3
PAMIGPLM_01734	7.18e-93	-	-	-	-	ko:K19132	-	ko00000,ko02048	-
PAMIGPLM_01735	0.0	ileS	6.1.1.5	-	J	ko:K01870	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
PAMIGPLM_01736	0.0	gph	-	-	G	ko:K16209	-	ko00000,ko02000	Psort location CytoplasmicMembrane, score 10.00
PAMIGPLM_01737	7.21e-237	-	-	-	K	ko:K02529	-	ko00000,ko03000	Transcriptional regulator, LacI family
PAMIGPLM_01738	0.0	-	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter transmembrane region
PAMIGPLM_01739	0.0	-	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter, ATP-binding protein
PAMIGPLM_01740	1.65e-134	-	-	-	K	-	-	-	MarR family
PAMIGPLM_01741	0.0	bglB	3.2.1.21	GH3	G	ko:K05349	ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110	ko00000,ko00001,ko01000	Glycosyl hydrolase family 3 N-terminal domain protein
PAMIGPLM_01742	4.97e-138	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PAMIGPLM_01743	1.31e-256	glxK	2.7.1.165	-	G	ko:K00865	ko00260,ko00561,ko00630,ko01100,ko01120,ko01130,map00260,map00561,map00630,map01100,map01120,map01130	ko00000,ko00001,ko01000	Belongs to the glycerate kinase type-1 family
PAMIGPLM_01744	2.44e-231	-	-	-	G	-	-	-	Transporter major facilitator family protein
PAMIGPLM_01745	0.0	-	3.2.1.40	-	E	ko:K05989	-	ko00000,ko01000	Bacterial alpha-L-rhamnosidase C-terminal domain
PAMIGPLM_01746	1.15e-271	-	-	-	U	ko:K06610	-	ko00000,ko02000	Sugar (and other) transporter
PAMIGPLM_01747	2.17e-147	-	-	-	K	ko:K02529	-	ko00000,ko03000	Periplasmic binding protein domain
PAMIGPLM_01748	1.43e-18	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
PAMIGPLM_01749	1.15e-278	-	-	-	U	ko:K08168,ko:K18926	-	ko00000,ko00002,ko01504,ko02000	Major Facilitator Superfamily
PAMIGPLM_01750	0.0	bgl2	3.2.1.21	GH3	G	ko:K05349	ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110	ko00000,ko00001,ko01000	Fibronectin type III-like domain
PAMIGPLM_01751	1.1e-139	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PAMIGPLM_01752	1.73e-307	-	3.2.1.4, 3.2.1.58	GH5,GH9	G	ko:K01179,ko:K01210	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 5 (cellulase A) family
PAMIGPLM_01753	0.0	-	3.2.1.37	GH43	G	ko:K01198	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Glycosyl hydrolases family 43
PAMIGPLM_01754	1.75e-296	-	3.2.1.4, 3.2.1.58	GH5,GH9	G	ko:K01179,ko:K01210	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 5 (cellulase A) family
PAMIGPLM_01755	1.36e-301	-	-	-	G	-	-	-	Transporter major facilitator family protein
PAMIGPLM_01756	6.59e-135	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PAMIGPLM_01757	0.0	-	3.2.1.23	-	G	ko:K12308	ko00052,map00052	ko00000,ko00001,ko01000	Beta-galactosidase trimerisation domain
PAMIGPLM_01758	2.24e-147	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PAMIGPLM_01759	0.0	egtA	6.3.2.2	-	H	ko:K01919	ko00270,ko00480,ko01100,map00270,map00480,map01100	ko00000,ko00001,ko00002,ko01000	Glutamate-cysteine ligase family 2(GCS2)
PAMIGPLM_01760	0.0	hgdC	-	-	I	-	-	-	CoA enzyme activase uncharacterised domain (DUF2229)
PAMIGPLM_01761	1.02e-199	-	-	-	I	-	-	-	BadF/BadG/BcrA/BcrD ATPase family
PAMIGPLM_01762	9.11e-179	nrdG	1.97.1.4	-	O	ko:K04068	-	ko00000,ko01000	Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PAMIGPLM_01763	0.0	nrdD	1.1.98.6	-	F	ko:K21636	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Anaerobic ribonucleoside-triphosphate reductase
PAMIGPLM_01764	2.58e-312	xseA	3.1.11.6	-	L	ko:K03601	ko03430,map03430	ko00000,ko00001,ko01000,ko03400	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PAMIGPLM_01765	8.4e-56	xseB	3.1.11.6	-	L	ko:K03602	ko03430,map03430	ko00000,ko00001,ko01000,ko03400	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PAMIGPLM_01767	1.13e-250	-	-	-	S	ko:K18353	ko01502,ko02020,map01502,map02020	ko00000,ko00001,ko00002,ko01504	Endonuclease/Exonuclease/phosphatase family
PAMIGPLM_01768	9.65e-56	-	-	-	V	-	-	-	ATPases associated with a variety of cellular activities
PAMIGPLM_01770	3.85e-27	-	-	-	M	-	-	-	cell wall anchor domain protein
PAMIGPLM_01771	2.83e-128	tmp1	-	-	S	-	-	-	Domain of unknown function (DUF4391)
PAMIGPLM_01772	4.54e-214	ppx1	3.6.1.11, 3.6.1.40	-	FP	ko:K01524	ko00230,map00230	ko00000,ko00001,ko01000	Ppx/GppA phosphatase family
PAMIGPLM_01773	5e-295	aspB	2.6.1.1, 2.6.1.2, 2.6.1.66	-	E	ko:K00812,ko:K08969,ko:K14260	ko00220,ko00250,ko00270,ko00290,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00290,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase class-V
PAMIGPLM_01774	2.71e-92	vsr	-	-	L	ko:K07458	-	ko00000,ko01000,ko03400	May nick specific sequences that contain T G mispairs resulting from m5C-deamination
PAMIGPLM_01775	6.68e-242	-	-	-	S	-	-	-	Oxidoreductase family, NAD-binding Rossmann fold
PAMIGPLM_01776	0.0	-	3.6.4.12	-	L	ko:K03658	-	ko00000,ko01000,ko03400	Psort location Cytoplasmic, score 8.87
PAMIGPLM_01777	1.49e-77	mutT	3.6.1.55	-	L	ko:K03574	-	ko00000,ko01000,ko03400	NUDIX domain
PAMIGPLM_01778	1.06e-16	-	-	-	KL	-	-	-	Domain of unknown function (DUF3427)
PAMIGPLM_01779	0.0	-	-	-	KL	-	-	-	Domain of unknown function (DUF3427)
PAMIGPLM_01780	2.94e-99	-	-	-	-	-	-	-	-
PAMIGPLM_01781	1.23e-96	-	-	-	S	-	-	-	Bacterial PH domain
PAMIGPLM_01782	5.03e-315	-	-	-	S	-	-	-	zinc finger
PAMIGPLM_01783	0.0	-	-	-	L	-	-	-	Psort location Cytoplasmic, score
PAMIGPLM_01784	3.3e-158	def	3.5.1.88	-	J	ko:K01462	-	ko00000,ko01000	Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
PAMIGPLM_01785	0.0	glmM	5.4.2.10	-	G	ko:K03431	ko00520,ko01100,ko01130,map00520,map01100,map01130	ko00000,ko00001,ko01000	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
PAMIGPLM_01786	0.0	eccCa	-	-	D	ko:K03466	-	ko00000,ko03036	FtsK/SpoIIIE family
PAMIGPLM_01787	1.03e-208	-	-	-	T	-	-	-	Forkhead associated domain
PAMIGPLM_01788	1.75e-257	-	-	-	-	-	-	-	-
PAMIGPLM_01789	7.98e-88	-	-	-	-	-	-	-	-
PAMIGPLM_01790	5.73e-241	-	-	-	-	-	-	-	-
PAMIGPLM_01791	3.87e-220	-	-	-	-	-	-	-	-
PAMIGPLM_01792	9.08e-254	-	-	-	-	-	-	-	-
PAMIGPLM_01793	0.0	vpr	-	-	O	-	-	-	Subtilase family
PAMIGPLM_01795	1.38e-59	-	-	-	S	-	-	-	Proteins of 100 residues with WXG
PAMIGPLM_01796	4.48e-64	-	-	-	S	-	-	-	Proteins of 100 residues with WXG
PAMIGPLM_01797	1.58e-285	-	-	-	S	-	-	-	WXG100 protein secretion system (Wss), protein YukD
PAMIGPLM_01798	0.0	mycP	-	-	O	ko:K14743	-	ko00000,ko01000,ko01002,ko03110	Type VII secretion system ESX-1, transport TM domain B
PAMIGPLM_01799	2.45e-217	-	-	-	-	-	-	-	-
PAMIGPLM_01800	0.0	pepN	3.4.11.2	-	E	ko:K01256,ko:K08776	ko00480,ko01100,map00480,map01100	ko00000,ko00001,ko01000,ko01002	Peptidase family M1 domain
PAMIGPLM_01801	0.0	rnj	-	-	J	ko:K12574	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PAMIGPLM_01802	4.1e-223	dapA	4.3.3.7	-	E	ko:K01714	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
PAMIGPLM_01803	0.0	-	3.6.3.4, 3.6.3.54	-	P	ko:K01533,ko:K17686	ko01524,ko04016,map01524,map04016	ko00000,ko00001,ko01000	E1-E2 ATPase
PAMIGPLM_01804	6.79e-52	csoR	-	-	S	ko:K21600	-	ko00000,ko03000	Metal-sensitive transcriptional repressor
PAMIGPLM_01805	4.54e-171	dapB	1.17.1.8	-	E	ko:K00215	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
PAMIGPLM_01806	5.69e-314	-	-	-	G	-	-	-	Major Facilitator Superfamily
PAMIGPLM_01807	0.0	uvrD2	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	Belongs to the helicase family. UvrD subfamily
PAMIGPLM_01808	0.0	-	-	-	L	-	-	-	PD-(D/E)XK nuclease superfamily
PAMIGPLM_01810	0.0	pknK	2.7.11.1	-	KLT	ko:K12132	-	ko00000,ko01000,ko01001	Protein tyrosine kinase
PAMIGPLM_01811	0.0	-	-	-	S	-	-	-	Fibronectin type 3 domain
PAMIGPLM_01812	2.46e-306	-	-	-	S	ko:K03924	-	ko00000,ko01000	ATPase family associated with various cellular activities (AAA)
PAMIGPLM_01813	2.31e-282	-	-	-	S	-	-	-	Protein of unknown function DUF58
PAMIGPLM_01814	0.0	-	-	-	E	-	-	-	Transglutaminase-like superfamily
PAMIGPLM_01815	7e-210	-	3.1.3.16	-	T	ko:K20074	-	ko00000,ko01000,ko01009	Sigma factor PP2C-like phosphatases
PAMIGPLM_01816	1.48e-146	-	-	-	B	-	-	-	Belongs to the OprB family
PAMIGPLM_01817	3.67e-129	-	-	-	T	-	-	-	Forkhead associated domain
PAMIGPLM_01818	0.0	rpoC	2.7.7.6	-	K	ko:K03046	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PAMIGPLM_01819	0.0	rpoB	2.7.7.6	-	K	ko:K03043	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PAMIGPLM_01820	1e-137	-	-	-	-	-	-	-	-
PAMIGPLM_01821	4.27e-231	mutY	-	-	L	ko:K03575	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	FES
PAMIGPLM_01822	2.24e-162	spoU	2.1.1.207	-	J	ko:K03216	-	ko00000,ko01000,ko03016	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
PAMIGPLM_01823	0.0	-	-	-	S	ko:K09157	-	ko00000	UPF0210 protein
PAMIGPLM_01824	1.32e-57	-	-	-	T	ko:K07166	-	ko00000	Belongs to the UPF0237 family
PAMIGPLM_01825	2.88e-30	-	-	-	U	ko:K18926	-	ko00000,ko00002,ko02000	Drug resistance MFS transporter, drug H antiporter-2 family
PAMIGPLM_01826	1.45e-297	galK	2.7.1.6, 2.7.7.12	-	G	ko:K00849,ko:K00965	ko00052,ko00520,ko01100,ko04917,map00052,map00520,map01100,map04917	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the GHMP kinase family. GalK subfamily
PAMIGPLM_01827	9.99e-317	galT	2.7.7.12	-	C	ko:K00965	ko00052,ko00520,ko01100,ko04917,map00052,map00520,map01100,map04917	ko00000,ko00001,ko00002,ko01000	Galactose-1-phosphate uridyl transferase, N-terminal domain
PAMIGPLM_01828	1.13e-181	-	-	-	K	-	-	-	DeoR C terminal sensor domain
PAMIGPLM_01829	1.41e-289	pyrD	1.3.5.2, 1.3.98.1	-	F	ko:K00226,ko:K00254	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor
PAMIGPLM_01830	4.15e-280	namA	-	-	C	-	-	-	NADH:flavin oxidoreductase / NADH oxidase family
PAMIGPLM_01831	0.0	pon1	-	-	M	-	-	-	Transglycosylase
PAMIGPLM_01832	3.02e-170	crp	-	-	K	ko:K10914	ko02020,ko02024,ko02025,ko02026,ko05111,map02020,map02024,map02025,map02026,map05111	ko00000,ko00001,ko03000	helix_turn_helix, cAMP Regulatory protein
PAMIGPLM_01833	4.1e-272	lplA	6.3.1.20	-	H	ko:K03800	ko00785,ko01100,map00785,map01100	ko00000,ko00001,ko01000	Biotin/lipoate A/B protein ligase family
PAMIGPLM_01834	4.6e-136	-	-	-	J	-	-	-	TM2 domain
PAMIGPLM_01835	9.62e-247	leuB	1.1.1.85	-	CE	ko:K00052	ko00290,ko00660,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map01100,map01110,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate
PAMIGPLM_01836	0.0	ptrB	3.4.21.83	-	E	ko:K01354	ko05142,ko05143,map05142,map05143	ko00000,ko00001,ko01000,ko01002	Peptidase, S9A B C family, catalytic domain protein
PAMIGPLM_01837	6.16e-301	-	-	-	S	-	-	-	Uncharacterized conserved protein (DUF2183)
PAMIGPLM_01838	1.66e-92	gcvH	-	-	E	ko:K02437	ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200	ko00000,ko00001,ko00002	The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein
PAMIGPLM_01839	1.2e-264	nudC	3.6.1.22	-	L	ko:K03426	ko00760,ko01100,ko04146,map00760,map01100,map04146	ko00000,ko00001,ko01000	NADH pyrophosphatase zinc ribbon domain
PAMIGPLM_01840	2.25e-206	-	-	-	I	-	-	-	Alpha/beta hydrolase family
PAMIGPLM_01841	1.95e-147	-	-	-	F	-	-	-	Domain of unknown function (DUF4916)
PAMIGPLM_01842	3.37e-79	trxA	1.8.1.9	-	O	ko:K00384,ko:K03671	ko00450,ko04621,ko05418,map00450,map04621,map05418	ko00000,ko00001,ko01000,ko03110	Belongs to the thioredoxin family
PAMIGPLM_01843	8.25e-225	-	-	-	S	ko:K21688	-	ko00000	G5
PAMIGPLM_01844	8.53e-115	-	-	-	-	-	-	-	-
PAMIGPLM_01845	0.0	-	3.2.1.1	GH13	G	ko:K01176	ko00500,ko01100,ko04973,map00500,map01100,map04973	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 13 family
PAMIGPLM_01846	0.0	-	3.2.1.1	GH13	G	ko:K01176	ko00500,ko01100,ko04973,map00500,map01100,map04973	ko00000,ko00001,ko01000	Bacterial Ig-like domain 2
PAMIGPLM_01847	4.71e-285	-	-	-	C	-	-	-	Polysaccharide pyruvyl transferase
PAMIGPLM_01848	5.08e-263	-	-	GT2	M	ko:K19427	-	ko00000,ko01000	Glycosyltransferase like family 2
PAMIGPLM_01849	5.2e-252	-	-	-	C	-	-	-	Psort location Cytoplasmic, score 8.87
PAMIGPLM_01850	1.07e-263	-	-	-	M	-	-	-	transferase activity, transferring glycosyl groups
PAMIGPLM_01851	0.0	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 9.99
PAMIGPLM_01852	0.0	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 9.99
PAMIGPLM_01853	6.47e-242	-	-	-	M	-	-	-	Glycosyltransferase like family 2
PAMIGPLM_01854	2.72e-203	-	-	-	M	-	-	-	Domain of unknown function (DUF4422)
PAMIGPLM_01855	0.0	-	3.2.1.1	GH13	G	ko:K01176	ko00500,ko01100,ko04973,map00500,map01100,map04973	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 13 family
PAMIGPLM_01856	2.32e-94	-	-	-	-	-	-	-	-
PAMIGPLM_01857	4.77e-38	-	-	-	K	-	-	-	Cro/C1-type HTH DNA-binding domain
PAMIGPLM_01858	4.31e-100	-	-	-	-	-	-	-	-
PAMIGPLM_01859	3.16e-125	etp	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Low molecular weight phosphatase family
PAMIGPLM_01860	0.0	wcoI	-	-	DM	-	-	-	Psort location CytoplasmicMembrane, score
PAMIGPLM_01861	0.0	-	-	-	G	-	-	-	Belongs to the glycosyl hydrolase 31 family
PAMIGPLM_01862	5.43e-189	-	-	-	P	ko:K02026,ko:K10190	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PAMIGPLM_01863	2.74e-209	-	-	-	P	ko:K02025	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PAMIGPLM_01864	0.0	-	-	-	G	ko:K02027	-	ko00000,ko00002,ko02000	Bacterial extracellular solute-binding protein
PAMIGPLM_01865	8.42e-237	-	-	-	K	-	-	-	Psort location Cytoplasmic, score
PAMIGPLM_01866	1.5e-231	-	-	-	K	-	-	-	helix_turn _helix lactose operon repressor
PAMIGPLM_01867	6.19e-284	-	-	-	G	ko:K02027,ko:K10117	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding protein
PAMIGPLM_01868	4.31e-207	-	-	-	G	ko:K02025	-	ko00000,ko00002,ko02000	PFAM binding-protein-dependent transport systems inner membrane component
PAMIGPLM_01869	4.28e-185	-	-	-	G	ko:K02026	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PAMIGPLM_01870	0.0	-	3.2.1.177	GH31	G	ko:K01811	-	ko00000,ko01000	Belongs to the glycosyl hydrolase 31 family
PAMIGPLM_01871	1.38e-74	yccF	-	-	S	-	-	-	Inner membrane component domain
PAMIGPLM_01872	1.02e-84	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 9.99
PAMIGPLM_01873	1.49e-133	-	-	-	-	-	-	-	-
PAMIGPLM_01874	6.95e-60	-	-	-	S	-	-	-	enterobacterial common antigen metabolic process
PAMIGPLM_01875	1.04e-146	-	-	-	S	-	-	-	enterobacterial common antigen metabolic process
PAMIGPLM_01877	1.54e-196	-	-	-	O	-	-	-	ATPase family associated with various cellular activities (AAA)
PAMIGPLM_01878	0.0	-	-	-	O	-	-	-	Subtilase family
PAMIGPLM_01880	1.3e-37	rfbA	2.7.7.24	-	H	ko:K00973	ko00521,ko00523,ko00525,ko01130,map00521,map00523,map00525,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
PAMIGPLM_01882	2.07e-33	-	-	-	-	-	-	-	-
PAMIGPLM_01884	7.19e-103	-	-	-	J	-	-	-	tRNA cytidylyltransferase activity
PAMIGPLM_01885	7.35e-90	-	-	-	-	-	-	-	-
PAMIGPLM_01887	7.61e-34	-	-	-	L	-	-	-	Transposase
PAMIGPLM_01888	8.28e-21	-	-	-	L	-	-	-	Transposase, Mutator family
PAMIGPLM_01889	7.41e-56	-	-	-	L	-	-	-	Transposase, Mutator family
PAMIGPLM_01890	8.25e-317	-	-	-	S	-	-	-	Polysaccharide biosynthesis protein
PAMIGPLM_01891	1.61e-235	-	-	-	S	-	-	-	Polysaccharide pyruvyl transferase
PAMIGPLM_01892	1.04e-210	-	-	-	C	-	-	-	Psort location Cytoplasmic, score 8.87
PAMIGPLM_01893	8.21e-226	-	-	-	S	-	-	-	Polysaccharide pyruvyl transferase
PAMIGPLM_01894	1.09e-133	-	-	-	S	-	-	-	Hexapeptide repeat of succinyl-transferase
PAMIGPLM_01895	9.8e-209	-	-	-	-	-	-	-	-
PAMIGPLM_01896	2.49e-189	-	-	-	-	-	-	-	-
PAMIGPLM_01897	6.1e-216	-	-	-	M	-	-	-	Capsular polysaccharide synthesis protein
PAMIGPLM_01898	3.48e-203	-	2.7.8.12	GT2	S	ko:K09809,ko:K19427	-	ko00000,ko01000	Glycosyltransferase like family 2
PAMIGPLM_01899	9.36e-286	-	-	-	M	-	-	-	Glycosyl transferase 4-like domain
PAMIGPLM_01900	3.41e-279	-	-	-	M	-	-	-	Domain of unknown function (DUF1972)
PAMIGPLM_01901	4.17e-194	-	-	-	M	-	-	-	Psort location Cytoplasmic, score 8.87
PAMIGPLM_01902	5.37e-189	-	-	-	M	-	-	-	Domain of unknown function (DUF4422)
PAMIGPLM_01903	1.73e-220	-	-	-	M	-	-	-	Capsular polysaccharide synthesis protein
PAMIGPLM_01904	3.23e-226	-	-	-	M	-	-	-	Glycosyl transferase, family 2
PAMIGPLM_01906	1.31e-211	-	-	-	H	-	-	-	Core-2/I-Branching enzyme
PAMIGPLM_01907	8.54e-317	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 9.99
PAMIGPLM_01908	9.61e-19	-	-	-	S	-	-	-	enterobacterial common antigen metabolic process
PAMIGPLM_01909	4.61e-19	-	-	-	L	-	-	-	Transposase, Mutator family
PAMIGPLM_01910	3.99e-252	-	-	-	-	-	-	-	-
PAMIGPLM_01911	0.0	-	-	-	M	-	-	-	Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
PAMIGPLM_01912	0.0	-	-	-	H	-	-	-	Protein of unknown function (DUF4012)
PAMIGPLM_01913	8.19e-244	staP	-	-	S	ko:K18353	ko01502,ko02020,map01502,map02020	ko00000,ko00001,ko00002,ko01504	Endonuclease/Exonuclease/phosphatase family
PAMIGPLM_01914	2.52e-63	-	-	-	-	-	-	-	-
PAMIGPLM_01915	0.0	-	-	-	U	-	-	-	Drug resistance MFS transporter, drug H antiporter-2 family
PAMIGPLM_01916	2.27e-307	-	-	-	T	-	-	-	Diguanylate cyclase (GGDEF) domain protein
PAMIGPLM_01917	9.8e-169	-	-	-	L	-	-	-	Protein of unknown function (DUF1524)
PAMIGPLM_01918	2.98e-212	-	-	-	S	-	-	-	Oxidoreductase, aldo keto reductase family protein
PAMIGPLM_01919	5.4e-309	mntH	-	-	P	ko:K03322	-	ko00000,ko02000	H( )-stimulated, divalent metal cation uptake system
PAMIGPLM_01920	6.55e-251	-	-	-	K	-	-	-	helix_turn _helix lactose operon repressor
PAMIGPLM_01921	0.0	bga1	3.2.1.23	-	G	ko:K12308	ko00052,map00052	ko00000,ko00001,ko01000	Psort location Cytoplasmic, score 8.87
PAMIGPLM_01922	0.0	-	-	-	G	ko:K02027	-	ko00000,ko00002,ko02000	Bacterial extracellular solute-binding protein
PAMIGPLM_01923	8.54e-164	pdxT	4.3.3.6	-	H	ko:K08681	ko00750,map00750	ko00000,ko00001,ko01000	Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
PAMIGPLM_01924	6.62e-199	pdxS	4.3.3.6	-	H	ko:K06215	ko00750,map00750	ko00000,ko00001,ko01000	Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
PAMIGPLM_01925	0.0	-	-	-	V	ko:K06147,ko:K06148,ko:K16013	ko02010,map02010	ko00000,ko00001,ko02000	ABC transporter transmembrane region
PAMIGPLM_01926	0.0	fadD	6.2.1.3	-	I	ko:K01897	ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920	ko00000,ko00001,ko00002,ko01000,ko01004,ko04147	AMP-binding enzyme
PAMIGPLM_01927	0.0	araA	5.3.1.4	-	G	ko:K01804	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko01000	Catalyzes the conversion of L-arabinose to L-ribulose
PAMIGPLM_01928	1.1e-167	araD	5.1.3.4	-	G	ko:K03077	ko00040,ko00053,ko01100,ko01120,map00040,map00053,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Class II Aldolase and Adducin N-terminal domain
PAMIGPLM_01929	0.0	araB	-	-	G	-	-	-	FGGY family of carbohydrate kinases, C-terminal domain
PAMIGPLM_01930	6.03e-270	-	-	-	K	-	-	-	helix_turn _helix lactose operon repressor
PAMIGPLM_01931	0.0	maf	-	-	DF	ko:K06287	-	ko00000	Maf-like protein
PAMIGPLM_01932	1.35e-240	thrB	2.7.1.39	-	E	ko:K00872	ko00260,ko01100,ko01110,ko01120,ko01230,map00260,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
PAMIGPLM_01933	1.3e-306	hom	1.1.1.3, 2.7.2.4	-	E	ko:K00003,ko:K12524	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Homoserine dehydrogenase
PAMIGPLM_01934	0.0	lysA	4.1.1.20	-	E	ko:K01586	ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
PAMIGPLM_01935	0.0	argS	6.1.1.19	-	J	ko:K01887	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Arginyl-tRNA synthetase
PAMIGPLM_01936	0.0	-	-	-	E	ko:K16235	-	ko00000,ko02000	amino acid
PAMIGPLM_01937	9.75e-85	psp1	3.5.99.10	-	J	ko:K09022	-	ko00000,ko01000	Endoribonuclease L-PSP
PAMIGPLM_01939	1.41e-156	-	-	-	S	-	-	-	CYTH
PAMIGPLM_01940	4.35e-215	ybbN	-	-	O	ko:K05838	-	ko00000,ko03110	Tetratricopeptide repeat
PAMIGPLM_01941	2.3e-231	-	-	-	-	-	-	-	-
PAMIGPLM_01942	2.16e-266	-	-	-	-	-	-	-	-
PAMIGPLM_01943	2.27e-192	-	5.2.1.8	-	M	ko:K01802	-	ko00000,ko01000	FKBP-type peptidyl-prolyl cis-trans isomerase
PAMIGPLM_01944	1.32e-156	nucS	-	-	L	ko:K07503	-	ko00000,ko01000	Cleaves both 3' and 5' ssDNA extremities of branched DNA structures
PAMIGPLM_01945	2.85e-60	atpC	-	-	C	ko:K02114	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Produces ATP from ADP in the presence of a proton gradient across the membrane
PAMIGPLM_01946	0.0	atpD	3.6.3.14	-	C	ko:K02112	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko01000	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
PAMIGPLM_01947	5.5e-210	atpG	-	-	C	ko:K02115	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
PAMIGPLM_01948	0.0	atpA	3.6.3.14	-	C	ko:K02111	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko01000	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
PAMIGPLM_01949	2.31e-191	atpH	-	-	C	ko:K02109,ko:K02113	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PAMIGPLM_01950	6.4e-93	atpF	-	-	C	ko:K02109	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
PAMIGPLM_01951	9.64e-42	atpE	-	-	C	ko:K02110	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PAMIGPLM_01952	6.89e-190	atpB	-	-	C	ko:K02108	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko03110	it plays a direct role in the translocation of protons across the membrane
PAMIGPLM_01953	1.4e-263	metAA	2.3.1.46	-	E	ko:K00651	ko00270,ko00920,ko01100,ko01110,ko01230,map00270,map00920,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
PAMIGPLM_01955	0.0	frc	2.8.3.15, 2.8.3.16	-	C	ko:K07544,ko:K07749	ko00623,ko01100,ko01120,ko01220,map00623,map01100,map01120,map01220	ko00000,ko00001,ko00002,ko01000	Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
PAMIGPLM_01956	2.36e-247	-	-	-	S	ko:K07088	-	ko00000	Membrane transport protein
PAMIGPLM_01957	0.0	oxc	4.1.1.8	-	EH	ko:K01577	ko00630,ko01100,map00630,map01100	ko00000,ko00001,ko01000	Thiamine pyrophosphate enzyme, central domain
PAMIGPLM_01958	4.44e-223	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
PAMIGPLM_01959	0.0	glgE	2.4.99.16	GH13	G	ko:K16147	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1- 4)- glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB
PAMIGPLM_01960	2.28e-118	ppa	3.6.1.1	-	C	ko:K01507	ko00190,map00190	ko00000,ko00001,ko01000	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
PAMIGPLM_01961	1.22e-127	mntP	-	-	P	-	-	-	Probably functions as a manganese efflux pump
PAMIGPLM_01962	1.09e-173	-	-	-	-	-	-	-	-
PAMIGPLM_01963	1.1e-172	glnR	-	-	KT	-	-	-	Transcriptional regulatory protein, C terminal
PAMIGPLM_01964	9.55e-158	nth	4.2.99.18	-	L	ko:K10773	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
PAMIGPLM_01965	0.0	-	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding proteins, family 5 Middle
PAMIGPLM_01966	0.0	valS	6.1.1.9	-	J	ko:K01873	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
PAMIGPLM_01967	0.0	-	-	-	S	-	-	-	domain protein
PAMIGPLM_01968	5.72e-90	tyrA	5.4.99.5	-	E	ko:K04092	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Chorismate mutase type II
PAMIGPLM_01969	6.29e-104	lrp_3	-	-	K	ko:K03719	-	ko00000,ko03000,ko03036	helix_turn_helix ASNC type
PAMIGPLM_01970	0.0	rho	-	-	K	ko:K03628	ko03018,map03018	ko00000,ko00001,ko03019,ko03021	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
PAMIGPLM_01971	0.0	-	-	-	H	-	-	-	Flavin containing amine oxidoreductase
PAMIGPLM_01972	1.43e-67	-	-	-	S	-	-	-	Protein of unknown function (DUF2469)
PAMIGPLM_01973	1.4e-261	-	-	-	J	-	-	-	Acetyltransferase (GNAT) domain
PAMIGPLM_01974	0.0	gatB	6.3.5.6, 6.3.5.7	-	J	ko:K02434	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PAMIGPLM_01975	0.0	gatA	6.3.5.6, 6.3.5.7	-	F	ko:K02433	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
PAMIGPLM_01976	7.57e-63	gatC	6.3.5.6, 6.3.5.7	-	J	ko:K02435	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PAMIGPLM_01977	1.46e-167	-	-	-	K	-	-	-	Psort location Cytoplasmic, score
PAMIGPLM_01978	1.04e-167	trmH	2.1.1.34	-	J	ko:K00556	-	ko00000,ko01000,ko03016	RNA methyltransferase TrmH family
PAMIGPLM_01979	4.93e-134	pyrE1	-	-	F	-	-	-	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
PAMIGPLM_01980	1.98e-261	rmuC	-	-	S	ko:K09760	-	ko00000	RmuC family
PAMIGPLM_01981	5.05e-184	-	3.6.3.54	-	P	ko:K17686	ko01524,ko04016,map01524,map04016	ko00000,ko00001,ko01000	Heavy metal translocating P-type atpase
PAMIGPLM_01982	0.0	clpB	-	-	O	ko:K03695,ko:K03696	ko01100,ko04213,map01100,map04213	ko00000,ko00001,ko03110	Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
PAMIGPLM_01983	1.66e-210	-	-	-	Q	-	-	-	Fumarylacetoacetate (FAA) hydrolase family
PAMIGPLM_01984	2.91e-189	-	-	-	S	ko:K06997	-	ko00000	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
PAMIGPLM_01985	1.34e-103	-	-	-	-	-	-	-	-
PAMIGPLM_01986	3.66e-266	gluQ	6.1.1.17	-	J	ko:K01885	ko00860,ko00970,ko01100,ko01110,ko01120,map00860,map00970,map01100,map01110,map01120	ko00000,ko00001,ko00002,ko01000,ko01007,ko02048,ko03016	Belongs to the class-I aminoacyl-tRNA synthetase family
PAMIGPLM_01987	8.29e-67	-	-	-	M	-	-	-	Protein of unknown function (DUF3152)
PAMIGPLM_01989	1.1e-177	glpF	-	-	U	ko:K02440	-	ko00000,ko02000	Belongs to the MIP aquaporin (TC 1.A.8) family
PAMIGPLM_01991	1.16e-92	rplI	-	-	J	ko:K02939	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to the 23S rRNA
PAMIGPLM_01992	3.05e-48	rpsR	-	-	J	ko:K02963	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
PAMIGPLM_01993	3.6e-103	ssb	-	-	L	ko:K03111	ko03030,ko03430,ko03440,map03030,map03430,map03440	ko00000,ko00001,ko03029,ko03032,ko03400	Single-stranded DNA-binding protein
PAMIGPLM_01994	7.12e-62	rpsF	-	-	J	ko:K02990	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Binds together with S18 to 16S ribosomal RNA
PAMIGPLM_01995	3.76e-244	prs	2.7.6.1	-	F	ko:K00948	ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PAMIGPLM_01996	2.28e-223	rbsK	2.7.1.15	-	H	ko:K00852	ko00030,map00030	ko00000,ko00001,ko01000	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PAMIGPLM_01997	0.0	-	-	-	EGP	ko:K08168	-	ko00000,ko00002,ko01504,ko02000	Major Facilitator Superfamily
PAMIGPLM_01998	9.16e-215	iunH2	3.2.2.1	-	F	ko:K01239	ko00230,ko00760,ko01100,map00230,map00760,map01100	ko00000,ko00001,ko01000	Inosine-uridine preferring nucleoside hydrolase
PAMIGPLM_01999	3.02e-253	-	-	-	K	ko:K02529	-	ko00000,ko03000	helix_turn _helix lactose operon repressor
PAMIGPLM_02000	2.33e-85	-	-	-	-	-	-	-	-
PAMIGPLM_02001	2.73e-257	rfbB	4.2.1.46	-	M	ko:K01710	ko00521,ko00523,ko00525,ko01055,ko01130,map00521,map00523,map00525,map01055,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
PAMIGPLM_02002	1.88e-247	-	-	-	L	ko:K07496	-	ko00000	Helix-turn-helix domain
PAMIGPLM_02003	2.71e-123	-	-	-	L	ko:K07450	-	ko00000	Resolvase, N terminal domain
PAMIGPLM_02004	5.94e-41	-	-	-	S	ko:K07133	-	ko00000	Domain of unknown function (DUF4143)
PAMIGPLM_02005	0.0	-	-	-	M	-	-	-	Psort location CytoplasmicMembrane, score 9.26
PAMIGPLM_02006	6.25e-248	-	-	-	M	-	-	-	Glycosyltransferase like family 2
PAMIGPLM_02007	1.1e-189	tagG	-	-	U	ko:K01992	-	ko00000,ko00002,ko02000	Transport permease protein
PAMIGPLM_02008	1.22e-309	-	-	-	GM	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PAMIGPLM_02009	0.0	-	-	-	M	ko:K07272	-	ko00000,ko01000,ko01003,ko01005	Rhamnan synthesis protein F
PAMIGPLM_02010	2.31e-210	-	-	-	I	-	-	-	Acyltransferase family
PAMIGPLM_02011	8.88e-193	-	-	GT2	M	ko:K13670	-	ko00000,ko01000	Glycosyltransferase like family 2
PAMIGPLM_02012	2.12e-237	-	-	-	S	-	-	-	Glucosyl transferase GtrII
PAMIGPLM_02013	2.61e-187	-	1.1.1.339	-	GM	ko:K19180	ko00523,ko01130,map00523,map01130	ko00000,ko00001,ko01000	NAD dependent epimerase/dehydratase family
PAMIGPLM_02014	8.66e-256	rfbB	4.2.1.46	-	M	ko:K01710	ko00521,ko00523,ko00525,ko01055,ko01130,map00521,map00523,map00525,map01055,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
PAMIGPLM_02015	0.0	rfbD	1.1.1.133, 5.1.3.13	-	M	ko:K00067,ko:K01790	ko00521,ko00523,ko01130,map00521,map00523,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
PAMIGPLM_02016	7.37e-222	rfbA	2.7.7.24	-	H	ko:K00973	ko00521,ko00523,ko00525,ko01130,map00521,map00523,map00525,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
PAMIGPLM_02017	0.0	-	-	-	M	-	-	-	Glycosyl hydrolases family 25
PAMIGPLM_02018	0.0	-	-	-	S	ko:K07133	-	ko00000	AAA domain
PAMIGPLM_02019	1.53e-105	-	-	-	-	-	-	-	-
PAMIGPLM_02021	0.0	-	3.1.1.53	-	E	ko:K05970	-	ko00000,ko01000	Carbohydrate esterase, sialic acid-specific acetylesterase
PAMIGPLM_02022	6.25e-76	-	-	-	-	-	-	-	-
PAMIGPLM_02024	5.28e-236	-	-	-	EGP	-	-	-	Major Facilitator Superfamily