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ORF_ID	e_value	Gene_name	EC_number	CAZy	COGs	KEGG_ko	KEGG_Pathway	BRITE	Description
PMJDBAPL_00001	1.09e-72	czrA	-	-	K	ko:K22043	-	ko00000,ko03000	Transcriptional regulator, ArsR family
PMJDBAPL_00002	7.02e-122	-	-	-	P	-	-	-	Cadmium resistance transporter
PMJDBAPL_00003	1.14e-176	XK27_08845	-	-	S	ko:K05833	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PMJDBAPL_00004	1.18e-196	XK27_08840	-	-	U	ko:K05832	-	ko00000,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
PMJDBAPL_00005	1.1e-233	ABC-SBP	-	-	S	ko:K01989	-	ko00000,ko00002,ko02000	ABC transporter
PMJDBAPL_00008	1.75e-134	-	-	-	S	-	-	-	Protein of unknown function (DUF3278)
PMJDBAPL_00009	2.58e-41	-	-	-	K	ko:K07729	-	ko00000,ko03000	Helix-turn-helix domain
PMJDBAPL_00010	6.4e-65	-	-	-	-	-	-	-	-
PMJDBAPL_00011	8.58e-91	-	-	-	K	-	-	-	Helix-turn-helix domain
PMJDBAPL_00012	0.0	-	-	-	S	-	-	-	ABC transporter, ATP-binding protein
PMJDBAPL_00013	2.06e-186	-	-	-	S	-	-	-	Putative ABC-transporter type IV
PMJDBAPL_00014	7.28e-138	-	-	-	NU	-	-	-	mannosyl-glycoprotein
PMJDBAPL_00015	0.0	brnQ	-	-	U	ko:K03311	-	ko00000	Component of the transport system for branched-chain amino acids
PMJDBAPL_00016	1.56e-294	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2325)
PMJDBAPL_00017	2.31e-256	yngD	-	-	S	ko:K07097	-	ko00000	DHHA1 domain
PMJDBAPL_00025	2.31e-256	xerS	-	-	L	-	-	-	Belongs to the 'phage' integrase family
PMJDBAPL_00027	3.42e-92	fabZ	4.2.1.59	-	I	ko:K02372	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
PMJDBAPL_00028	4.56e-99	-	-	-	K	-	-	-	Transcriptional regulator, MarR family
PMJDBAPL_00029	3.51e-128	fabH	2.3.1.180	-	I	ko:K00648	ko00061,ko01100,ko01212,map00061,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
PMJDBAPL_00030	4.2e-64	fabH	2.3.1.180	-	I	ko:K00648	ko00061,ko01100,ko01212,map00061,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
PMJDBAPL_00031	1.24e-42	acpP	-	-	IQ	ko:K02078	-	ko00000,ko00001	Carrier of the growing fatty acid chain in fatty acid biosynthesis
PMJDBAPL_00032	2.91e-189	fabD	2.3.1.39	-	I	ko:K00645,ko:K15327,ko:K15329	ko00061,ko00333,ko01100,ko01130,ko01212,map00061,map00333,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004,ko01008	Malonyl CoA-acyl carrier protein transacylase
PMJDBAPL_00033	9.08e-153	fabG	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	reductase
PMJDBAPL_00034	1.4e-71	accC	6.3.4.14, 6.4.1.2	-	I	ko:K01961	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002,ko01000	Acetyl-CoA carboxylase biotin carboxylase subunit
PMJDBAPL_00035	3.38e-135	accC	6.3.4.14, 6.4.1.2	-	I	ko:K01961	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002,ko01000	Acetyl-CoA carboxylase biotin carboxylase subunit
PMJDBAPL_00036	1.82e-180	accD	2.1.3.15, 6.4.1.2	-	I	ko:K01963	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002,ko01000	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
PMJDBAPL_00037	6.9e-114	accA	2.1.3.15, 6.4.1.2	-	I	ko:K01962	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002,ko01000	alpha subunit
PMJDBAPL_00038	5.1e-164	fabI	1.3.1.10, 1.3.1.9	-	I	ko:K00208	ko00061,ko00333,ko00780,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Enoyl- acyl-carrier-protein reductase NADH
PMJDBAPL_00045	2.28e-114	-	-	-	-	-	-	-	-
PMJDBAPL_00046	2.32e-93	pnb	-	-	C	-	-	-	nitroreductase
PMJDBAPL_00047	1.93e-36	XK27_00915	-	-	C	-	-	-	Luciferase-like monooxygenase
PMJDBAPL_00048	8.07e-190	-	3.2.1.96, 3.5.1.28	GH73	M	ko:K01227,ko:K01447,ko:K13714,ko:K13731	ko00511,ko05100,map00511,map05100	ko00000,ko00001,ko01000	N-acetylmuramoyl-L-alanine amidase
PMJDBAPL_00049	2.54e-96	-	-	-	S	-	-	-	Protein of unknown function (DUF3021)
PMJDBAPL_00050	1.32e-96	-	-	-	K	-	-	-	LytTr DNA-binding domain
PMJDBAPL_00051	1.7e-26	-	-	-	-	-	-	-	-
PMJDBAPL_00052	9.21e-153	ybhL	-	-	S	ko:K06890	-	ko00000	Belongs to the BI1 family
PMJDBAPL_00053	3.45e-100	yjcF	3.5.4.33, 4.4.1.8	-	K	ko:K02348,ko:K07000,ko:K11991,ko:K14155	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko01000,ko01007,ko03016	protein acetylation
PMJDBAPL_00054	1.64e-242	-	-	-	S	-	-	-	Protein of unknown function (DUF3114)
PMJDBAPL_00055	0.0	gshA	6.3.2.2	-	H	ko:K01919	ko00270,ko00480,ko01100,map00270,map00480,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the glutamate--cysteine ligase type 1 family
PMJDBAPL_00056	2.33e-84	-	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	Belongs to the LDH MDH superfamily
PMJDBAPL_00057	5.03e-77	-	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	Belongs to the LDH MDH superfamily
PMJDBAPL_00058	4.89e-134	-	3.2.2.10	-	S	ko:K06966	ko00230,ko00240,map00230,map00240	ko00000,ko00001,ko01000	Belongs to the LOG family
PMJDBAPL_00059	4.62e-81	-	-	-	S	-	-	-	Domain of unknown function (DUF4828)
PMJDBAPL_00060	4.39e-244	mocA	-	-	S	-	-	-	Oxidoreductase
PMJDBAPL_00061	9.46e-298	yfmL	-	-	L	-	-	-	DEAD DEAH box helicase
PMJDBAPL_00063	2e-264	mnaA	5.1.3.14	-	G	ko:K01791	ko00520,ko01100,ko05111,map00520,map01100,map05111	ko00000,ko00001,ko00002,ko01000,ko01005	Belongs to the UDP-N-acetylglucosamine 2-epimerase family
PMJDBAPL_00064	1.63e-51	-	-	-	-	-	-	-	-
PMJDBAPL_00065	4.94e-88	gtcA	-	-	S	-	-	-	Teichoic acid glycosylation protein
PMJDBAPL_00066	5.49e-102	ykuP	-	-	C	ko:K03839	-	ko00000	Flavodoxin
PMJDBAPL_00067	1e-215	map	3.4.11.18	-	E	ko:K01265	-	ko00000,ko01000,ko01002	Methionine Aminopeptidase
PMJDBAPL_00068	1.97e-280	arcT	-	-	E	-	-	-	Aminotransferase
PMJDBAPL_00069	0.0	arcD	-	-	E	ko:K03758	-	ko00000,ko02000	Arginine ornithine antiporter
PMJDBAPL_00070	0.0	potE	-	-	E	-	-	-	Amino Acid
PMJDBAPL_00071	1.83e-203	rbn	-	-	S	ko:K07058	-	ko00000	Belongs to the UPF0761 family
PMJDBAPL_00072	5.13e-46	-	-	-	S	-	-	-	Protein of unknown function (DUF2922)
PMJDBAPL_00073	1.03e-41	-	-	-	-	-	-	-	-
PMJDBAPL_00074	8.57e-177	recX	-	-	S	ko:K03565	-	ko00000,ko03400	Regulatory protein RecX
PMJDBAPL_00075	2.14e-184	cps1D	-	-	M	-	-	-	Domain of unknown function (DUF4422)
PMJDBAPL_00076	1.61e-224	yfdH	-	GT2	M	ko:K12999	-	ko00000,ko01000,ko01003,ko01005	Glycosyltransferase, group 2 family protein
PMJDBAPL_00077	6.93e-154	-	-	-	M	-	-	-	Bacterial sugar transferase
PMJDBAPL_00078	0.0	spoIIQ	-	-	M	ko:K06386	-	ko00000	Peptidase family M23
PMJDBAPL_00079	0.0	-	-	-	G	-	-	-	Peptidase_C39 like family
PMJDBAPL_00080	4.34e-36	-	-	-	-	-	-	-	-
PMJDBAPL_00081	5.09e-125	-	-	-	L	-	-	-	Transposase
PMJDBAPL_00082	7.79e-89	ysdB	-	-	S	ko:K01990	-	ko00000,ko00002,ko02000	Domain of unknown function (DUF4162)
PMJDBAPL_00083	3.44e-60	ysdA	-	-	CP	ko:K01992	-	ko00000,ko00002,ko02000	transmembrane transport
PMJDBAPL_00085	9.97e-162	-	-	-	O	-	-	-	Bacterial dnaA protein
PMJDBAPL_00086	5.57e-143	-	-	-	L	-	-	-	Integrase core domain
PMJDBAPL_00088	3.75e-103	traP	1.14.99.57	-	S	ko:K21481	-	ko00000,ko01000	enzyme involved in biosynthesis of extracellular polysaccharides
PMJDBAPL_00089	2.02e-88	spxA	-	-	K	ko:K16509	-	ko00000	Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
PMJDBAPL_00090	1.28e-153	mecA	-	-	NOT	ko:K16511	-	ko00000	Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
PMJDBAPL_00091	5.93e-265	coiA	-	-	S	ko:K06198	-	ko00000	Competence protein
PMJDBAPL_00092	0.0	pepDA	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
PMJDBAPL_00093	2.41e-148	yjbH	-	-	Q	-	-	-	Thioredoxin
PMJDBAPL_00094	1.29e-150	yjbM	2.7.6.5	-	S	ko:K07816	ko00230,map00230	ko00000,ko00001,ko01000	RelA SpoT domain protein
PMJDBAPL_00095	1.46e-196	nadK	2.7.1.23	-	F	ko:K00858	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
PMJDBAPL_00096	3.38e-222	yjbO	5.4.99.23	-	G	ko:K06180	-	ko00000,ko01000,ko03009	Responsible for synthesis of pseudouridine from uracil
PMJDBAPL_00097	3.01e-66	-	-	-	EGP	-	-	-	Major Facilitator
PMJDBAPL_00098	1.33e-110	-	-	-	EGP	-	-	-	Major Facilitator
PMJDBAPL_00099	5.74e-31	-	-	-	EGP	-	-	-	Major Facilitator
PMJDBAPL_00100	9.89e-86	-	-	-	K	-	-	-	Transcriptional regulator
PMJDBAPL_00101	1.78e-51	-	-	-	-	-	-	-	-
PMJDBAPL_00102	0.0	ydaO	-	-	E	-	-	-	amino acid
PMJDBAPL_00103	0.0	-	-	-	E	-	-	-	amino acid
PMJDBAPL_00104	6.36e-55	-	-	-	S	ko:K19055	-	ko00000,ko01000,ko03016	Aminoacyl-tRNA editing domain
PMJDBAPL_00105	5.5e-41	-	-	-	S	ko:K19055	-	ko00000,ko01000,ko03016	YbaK proline--tRNA ligase associated domain protein
PMJDBAPL_00106	0.0	groL	-	-	O	ko:K04077	ko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
PMJDBAPL_00107	1.83e-59	groS	-	-	O	ko:K04078	-	ko00000,ko03029,ko03110	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
PMJDBAPL_00108	4.67e-147	rex	-	-	K	ko:K01926	-	ko00000,ko03000	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
PMJDBAPL_00109	0.0	ydiF	-	-	S	ko:K06158	-	ko00000,ko03012	ABC transporter, ATP-binding protein
PMJDBAPL_00110	1.97e-53	-	-	-	S	-	-	-	Protein of unknown function (DUF1797)
PMJDBAPL_00111	2.67e-228	mprF	-	-	I	ko:K07027	-	ko00000,ko02000	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
PMJDBAPL_00112	1.96e-253	cpoA	2.4.1.208	GT4	M	ko:K13677,ko:K13678	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000,ko01003	Glycosyltransferase, group 1 family protein
PMJDBAPL_00113	2.1e-289	pimB	2.4.1.337	GT4	M	ko:K19002	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000,ko01003	Glycosyltransferase, group 1 family protein
PMJDBAPL_00114	0.0	ptsI	2.7.3.9	-	G	ko:K08483	ko02060,map02060	ko00000,ko00001,ko01000,ko02000	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
PMJDBAPL_00115	3.69e-54	ptsH	-	-	G	ko:K11189	-	ko00000,ko02000	phosphocarrier protein HPR
PMJDBAPL_00116	5.62e-37	-	-	-	-	-	-	-	-
PMJDBAPL_00117	0.0	clpE	-	-	O	ko:K03697,ko:K04086	-	ko00000,ko03110	Belongs to the ClpA ClpB family
PMJDBAPL_00118	1.56e-130	-	-	-	S	-	-	-	Pfam:DUF3816
PMJDBAPL_00119	9.48e-183	-	-	-	G	-	-	-	MucBP domain
PMJDBAPL_00120	8.79e-143	-	-	-	-	-	-	-	-
PMJDBAPL_00121	1.5e-198	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PMJDBAPL_00122	2.41e-84	-	-	-	K	-	-	-	Transcriptional regulator, GntR family
PMJDBAPL_00124	0.0	-	-	-	M	-	-	-	NlpC/P60 family
PMJDBAPL_00125	0.0	prfC	-	-	J	ko:K02837	-	ko00000,ko03012	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
PMJDBAPL_00126	1.08e-297	brpA	-	-	K	-	-	-	Cell envelope-like function transcriptional attenuator common domain protein
PMJDBAPL_00127	3.74e-232	yueF	-	-	S	-	-	-	AI-2E family transporter
PMJDBAPL_00128	0.0	-	-	-	G	-	-	-	Peptidase_C39 like family
PMJDBAPL_00129	1.82e-195	rfbD	1.1.1.133	-	M	ko:K00067	ko00521,ko00523,ko01130,map00521,map00523,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
PMJDBAPL_00130	1.89e-129	rfbB	4.2.1.46	-	M	ko:K01710	ko00521,ko00523,ko00525,ko01055,ko01130,map00521,map00523,map00525,map01055,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
PMJDBAPL_00136	5.82e-131	-	-	-	S	ko:K06919	-	ko00000	D5 N terminal like
PMJDBAPL_00137	2.57e-57	-	-	-	-	-	-	-	-
PMJDBAPL_00141	7.28e-20	-	-	-	-	-	-	-	-
PMJDBAPL_00142	1.34e-20	xre	-	-	K	-	-	-	sequence-specific DNA binding
PMJDBAPL_00143	2.03e-168	int2	-	-	L	-	-	-	Belongs to the 'phage' integrase family
PMJDBAPL_00149	5.82e-131	-	-	-	S	ko:K06919	-	ko00000	D5 N terminal like
PMJDBAPL_00150	1.48e-90	-	-	-	-	-	-	-	-
PMJDBAPL_00152	9.92e-13	-	-	-	L	-	-	-	DnaD domain protein
PMJDBAPL_00157	5.44e-07	-	-	-	S	-	-	-	Helix-turn-helix domain
PMJDBAPL_00158	8.59e-56	-	-	-	S	-	-	-	Phage regulatory protein Rha (Phage_pRha)
PMJDBAPL_00159	2.86e-19	-	-	-	S	-	-	-	Helix-turn-helix domain
PMJDBAPL_00160	1.36e-09	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
PMJDBAPL_00161	2.03e-168	int2	-	-	L	-	-	-	Belongs to the 'phage' integrase family
PMJDBAPL_00164	8.53e-115	tpx	1.11.1.15	-	O	ko:K11065	-	ko00000,ko01000	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
PMJDBAPL_00165	3.48e-86	-	-	-	K	-	-	-	HxlR-like helix-turn-helix
PMJDBAPL_00166	1.61e-81	-	-	-	S	-	-	-	macrophage migration inhibitory factor
PMJDBAPL_00167	4.16e-211	-	-	-	C	-	-	-	Oxidoreductase
PMJDBAPL_00170	0.0	dtpT	-	-	U	ko:K03305	-	ko00000	amino acid peptide transporter
PMJDBAPL_00171	3.46e-192	-	-	-	S	-	-	-	Calcineurin-like phosphoesterase
PMJDBAPL_00174	2.3e-145	-	-	-	-	-	-	-	-
PMJDBAPL_00175	0.0	-	-	-	EGP	-	-	-	Major Facilitator
PMJDBAPL_00176	0.0	-	-	-	P	ko:K07085	-	ko00000	Predicted Permease Membrane Region
PMJDBAPL_00177	1.82e-170	racX	5.1.1.13	-	M	ko:K01779	ko00250,ko01054,map00250,map01054	ko00000,ko00001,ko01000	Belongs to the aspartate glutamate racemases family
PMJDBAPL_00178	3.54e-165	yvoA_2	-	-	K	ko:K03710	-	ko00000,ko03000	UbiC transcription regulator-associated domain protein
PMJDBAPL_00179	0.0	pncB	6.3.4.21	-	F	ko:K00763	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
PMJDBAPL_00180	1.58e-198	nadE	6.3.1.5	-	F	ko:K01916	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
PMJDBAPL_00181	0.0	tex	-	-	K	ko:K06959	-	ko00000	Tex-like protein N-terminal domain protein
PMJDBAPL_00182	1.16e-111	ydcK	-	-	S	ko:K03095	-	ko00000	Belongs to the SprT family
PMJDBAPL_00184	1.32e-101	-	-	-	-	-	-	-	-
PMJDBAPL_00185	1.33e-228	-	-	-	-	-	-	-	-
PMJDBAPL_00186	5.04e-234	fecB	-	-	P	ko:K02016	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Periplasmic binding protein
PMJDBAPL_00187	2.79e-179	fecE	3.6.3.34	-	HP	ko:K02013	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	AAA domain, putative AbiEii toxin, Type IV TA system
PMJDBAPL_00188	2.63e-168	fecD	-	-	P	ko:K02015	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PMJDBAPL_00189	4.56e-104	-	-	-	S	-	-	-	Flavodoxin
PMJDBAPL_00190	2.29e-84	moaE	2.8.1.12	-	H	ko:K03635,ko:K21142	ko00790,ko01100,ko04122,map00790,map01100,map04122	ko00000,ko00001,ko01000	MoaE protein
PMJDBAPL_00191	9.9e-49	moaD	-	-	H	ko:K03636	ko04122,map04122	ko00000,ko00001	ThiS family
PMJDBAPL_00192	3.17e-280	narK	-	-	P	ko:K02575	ko00910,map00910	ko00000,ko00001,ko00002,ko02000	Transporter, major facilitator family protein
PMJDBAPL_00193	7.54e-210	-	-	-	H	-	-	-	geranyltranstransferase activity
PMJDBAPL_00194	3.16e-233	-	-	-	-	-	-	-	-
PMJDBAPL_00196	6.38e-151	nreC	-	-	K	ko:K07696	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	PFAM regulatory protein LuxR
PMJDBAPL_00197	3.57e-238	nreB	2.7.13.3	-	F	ko:K07683	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Sensor histidine kinase
PMJDBAPL_00198	6.37e-60	-	-	-	-	-	-	-	-
PMJDBAPL_00199	9.65e-135	mobA	2.7.7.77	-	H	ko:K03752	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko01000	Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor
PMJDBAPL_00200	3.23e-108	mobB	-	-	H	ko:K03753	-	ko00000	molybdopterin-guanine dinucleotide biosynthesis protein
PMJDBAPL_00201	6.03e-289	moeA	2.10.1.1	-	H	ko:K03750	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko01000	MoeA N-terminal region (domain I and II)
PMJDBAPL_00202	3.07e-103	moaB	2.7.7.75	-	H	ko:K03638	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko01000	May be involved in the biosynthesis of molybdopterin
PMJDBAPL_00203	2.09e-242	moeB	2.7.7.80	-	H	ko:K21029	ko04122,map04122	ko00000,ko00001,ko01000	ThiF family
PMJDBAPL_00204	0.0	narZ	1.7.5.1	-	C	ko:K00370	ko00910,ko01120,ko02020,map00910,map01120,map02020	ko00000,ko00001,ko00002,ko01000	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
PMJDBAPL_00205	0.0	narH	1.7.5.1	-	C	ko:K00371	ko00910,ko01120,ko02020,map00910,map01120,map02020	ko00000,ko00001,ko00002,ko01000	4Fe-4S dicluster domain
PMJDBAPL_00206	9.95e-129	narJ	-	-	C	ko:K00373	ko02020,map02020	ko00000,ko00001	nitrate reductase molybdenum cofactor assembly chaperone
PMJDBAPL_00207	9.45e-168	narI	1.7.5.1	-	C	ko:K00374	ko00910,ko01120,ko02020,map00910,map01120,map02020	ko00000,ko00001,ko00002,ko01000	Nitrate reductase
PMJDBAPL_00208	3.26e-197	-	-	-	EG	-	-	-	EamA-like transporter family
PMJDBAPL_00209	1.34e-151	-	-	-	L	-	-	-	Integrase
PMJDBAPL_00210	1.03e-203	rssA	-	-	S	-	-	-	Phospholipase, patatin family
PMJDBAPL_00211	9.86e-41	sacB	2.4.1.10, 2.4.1.9	GH68	M	ko:K00692,ko:K20811	ko00500,ko01100,ko02020,map00500,map01100,map02020	ko00000,ko00001,ko01000,ko01003	Levansucrase/Invertase
PMJDBAPL_00212	0.0	sacB	2.4.1.10, 2.4.1.9	GH68	M	ko:K00692,ko:K20811	ko00500,ko01100,ko02020,map00500,map01100,map02020	ko00000,ko00001,ko01000,ko01003	Levansucrase/Invertase
PMJDBAPL_00213	3.6e-41	-	-	-	L	ko:K07497	-	ko00000	PFAM Integrase catalytic region
PMJDBAPL_00214	1.63e-145	yvyE	3.4.13.9	-	S	ko:K01271	-	ko00000,ko01000,ko01002	YigZ family
PMJDBAPL_00215	0.0	comFA	-	-	L	ko:K02240	-	ko00000,ko00002,ko02044	Helicase C-terminal domain protein
PMJDBAPL_00216	2.41e-164	comFC	-	-	S	ko:K02242	-	ko00000,ko00002,ko02044	Competence protein
PMJDBAPL_00217	5e-124	hpf	-	-	J	ko:K05808	-	ko00000,ko03009	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
PMJDBAPL_00218	0.0	secA	-	-	U	ko:K03070	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
PMJDBAPL_00219	1.11e-238	prfB	-	-	J	ko:K02836	-	ko00000,ko03012	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
PMJDBAPL_00220	2.47e-65	-	-	-	KT	ko:K03973	-	ko00000,ko02048,ko03000	PspC domain protein
PMJDBAPL_00221	1.88e-68	yvlD	-	-	S	ko:K08972	-	ko00000	Mycobacterial 4 TMS phage holin, superfamily IV
PMJDBAPL_00222	2.29e-225	hprK	-	-	F	ko:K06023	-	ko00000,ko01000	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
PMJDBAPL_00223	3.18e-198	lgt	-	-	M	ko:K13292	-	ko00000,ko01000	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
PMJDBAPL_00224	2.31e-234	gpsA	1.1.1.94	-	I	ko:K00057	ko00564,ko01110,map00564,map01110	ko00000,ko00001,ko01000	Glycerol-3-phosphate dehydrogenase
PMJDBAPL_00225	1.08e-215	galU	2.7.7.9	-	M	ko:K00963	ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	UTP-glucose-1-phosphate uridylyltransferase
PMJDBAPL_00226	2.5e-175	lutC	-	-	S	ko:K00782	-	ko00000	LUD domain
PMJDBAPL_00227	0.0	lutB	-	-	C	ko:K18929	-	ko00000	4Fe-4S dicluster domain
PMJDBAPL_00228	4.2e-201	lutA	-	-	C	ko:K18928	-	ko00000	Cysteine-rich domain
PMJDBAPL_00229	1.37e-221	trxB	1.8.1.9	-	C	ko:K00384	ko00450,map00450	ko00000,ko00001,ko01000	Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
PMJDBAPL_00230	2.65e-268	-	3.5.1.18	-	E	ko:K01439	ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000	succinyl-diaminopimelate desuccinylase
PMJDBAPL_00231	4.2e-208	-	-	-	ET	ko:K02030	-	ko00000,ko00002,ko02000	PFAM extracellular solute-binding protein, family 3
PMJDBAPL_00232	1.36e-112	ykhA	3.1.2.20	-	I	ko:K01073	-	ko00000,ko01000	Thioesterase superfamily
PMJDBAPL_00233	0.0	pgm	5.4.2.2	-	G	ko:K01835	ko00010,ko00030,ko00052,ko00230,ko00500,ko00520,ko00521,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00052,map00230,map00500,map00520,map00521,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
PMJDBAPL_00234	7.21e-150	yfbR	-	-	S	ko:K07023	-	ko00000	HD containing hydrolase-like enzyme
PMJDBAPL_00235	1.03e-19	-	-	-	-	-	-	-	-
PMJDBAPL_00236	0.0	uvrB	-	-	L	ko:K03702	ko03420,map03420	ko00000,ko00001,ko03400	damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
PMJDBAPL_00237	0.0	uvrA	-	-	L	ko:K03701	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
PMJDBAPL_00238	0.0	steT	-	-	E	ko:K03294	-	ko00000	amino acid
PMJDBAPL_00239	3.83e-206	yvcJ	-	-	S	ko:K06958	-	ko00000,ko03019	Displays ATPase and GTPase activities
PMJDBAPL_00240	1.41e-239	yvcK	-	-	S	-	-	-	Required for morphogenesis under gluconeogenic growth conditions
PMJDBAPL_00241	2.26e-217	whiA	-	-	K	ko:K09762	-	ko00000	May be required for sporulation
PMJDBAPL_00243	1.83e-21	-	-	-	-	-	-	-	-
PMJDBAPL_00244	1.18e-307	glpT	-	-	G	ko:K02445	-	ko00000,ko02000	Major Facilitator Superfamily
PMJDBAPL_00245	4.72e-134	clpP	3.4.21.92	-	O	ko:K01358	ko04112,ko04212,map04112,map04212	ko00000,ko00001,ko01000,ko01002	Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
PMJDBAPL_00247	1.53e-242	gap	1.2.1.12	-	G	ko:K00134	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
PMJDBAPL_00248	7.62e-290	pgk	2.7.2.3	-	F	ko:K00927	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the phosphoglycerate kinase family
PMJDBAPL_00249	2.51e-182	tpiA	5.3.1.1	-	G	ko:K01803	ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
PMJDBAPL_00250	0.0	eno	4.2.1.11	-	G	ko:K01689	ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066	ko00000,ko00001,ko00002,ko01000,ko03019,ko04147	Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
PMJDBAPL_00251	0.0	yifK	-	-	E	ko:K03293	-	ko00000	Amino acid permease
PMJDBAPL_00252	0.0	eriC	-	-	P	ko:K03281	-	ko00000	chloride
PMJDBAPL_00253	1.43e-47	secG	-	-	U	ko:K03075	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Preprotein translocase
PMJDBAPL_00254	6.64e-187	est	3.1.1.1	-	S	ko:K03928	-	ko00000,ko01000	Serine aminopeptidase, S33
PMJDBAPL_00255	0.0	rnr	-	-	J	ko:K12573	ko03018,map03018	ko00000,ko00001,ko01000,ko03016,ko03019	3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
PMJDBAPL_00256	7.73e-109	smpB	-	-	J	ko:K03664	-	ko00000	the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
PMJDBAPL_00257	9.61e-137	-	-	-	-	-	-	-	-
PMJDBAPL_00258	7.51e-174	ung	3.2.2.27	-	L	ko:K03648	ko03410,ko05340,map03410,map05340	ko00000,ko00001,ko01000,ko03400	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
PMJDBAPL_00259	1.97e-228	pta	2.3.1.8, 3.6.3.21	-	C	ko:K00625,ko:K02028	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000,ko02000	phosphate acetyltransferase
PMJDBAPL_00260	1.2e-105	ydiB	-	-	O	ko:K06925	-	ko00000,ko03016	Hydrolase, P-loop family
PMJDBAPL_00261	2.63e-115	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
PMJDBAPL_00262	2.92e-98	XK27_04775	-	-	S	ko:K09155	-	ko00000	PAS domain
PMJDBAPL_00263	1.24e-131	dnaQ	2.7.7.7	-	L	ko:K02342	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III
PMJDBAPL_00264	5.56e-215	murB	1.3.1.98	-	M	ko:K00075	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation
PMJDBAPL_00265	3.74e-213	rbsK	2.7.1.15	-	H	ko:K00852	ko00030,map00030	ko00000,ko00001,ko01000	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PMJDBAPL_00266	2.03e-87	rbsD	5.4.99.62	-	G	ko:K06726	ko02010,map02010	ko00000,ko00001,ko01000	Catalyzes the interconversion of beta-pyran and beta- furan forms of D-ribose
PMJDBAPL_00267	0.0	fucP	-	-	G	ko:K02429	-	ko00000,ko02000	Major Facilitator Superfamily
PMJDBAPL_00268	5.43e-194	dacA	2.7.7.85	-	S	ko:K18672	-	ko00000,ko01000	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
PMJDBAPL_00269	3.04e-164	ybbR	-	-	S	-	-	-	YbbR-like protein
PMJDBAPL_00270	0.0	glmM	5.4.2.10	-	G	ko:K03431	ko00520,ko01100,ko01130,map00520,map01100,map01130	ko00000,ko00001,ko01000	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
PMJDBAPL_00271	0.0	glmS	2.6.1.16	-	M	ko:K00820	ko00250,ko00520,ko01100,ko01130,ko04931,map00250,map00520,map01100,map01130,map04931	ko00000,ko00001,ko01000,ko01002	Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
PMJDBAPL_00272	5.17e-70	-	-	-	-	-	-	-	-
PMJDBAPL_00273	0.0	oatA	-	-	I	-	-	-	Acyltransferase
PMJDBAPL_00274	1.23e-103	-	-	-	K	-	-	-	Transcriptional regulator
PMJDBAPL_00275	7.44e-189	-	-	-	S	-	-	-	Cof-like hydrolase
PMJDBAPL_00276	1.94e-107	lytE	-	-	M	-	-	-	Lysin motif
PMJDBAPL_00278	4.48e-171	yclJ	-	-	K	ko:K02483	-	ko00000,ko02022	response regulator
PMJDBAPL_00279	0.0	yclK	-	-	T	-	-	-	Histidine kinase
PMJDBAPL_00280	1.34e-200	-	-	-	U	ko:K05340	-	ko00000,ko02000	sugar transport
PMJDBAPL_00281	4.93e-153	maa3	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	transferase hexapeptide repeat
PMJDBAPL_00282	0.0	pgi	5.3.1.9	-	G	ko:K01810	ko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the GPI family
PMJDBAPL_00283	2.49e-39	-	-	-	-	-	-	-	-
PMJDBAPL_00284	1.83e-277	xylR	-	-	GK	-	-	-	ROK family
PMJDBAPL_00286	0.0	xylT	-	-	EGP	-	-	-	Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family
PMJDBAPL_00287	8.96e-223	rhaS2	-	-	K	-	-	-	Transcriptional regulator, AraC family
PMJDBAPL_00288	0.0	-	-	-	G	ko:K03292	-	ko00000	MFS/sugar transport protein
PMJDBAPL_00289	0.0	-	-	-	G	-	-	-	Right handed beta helix region
PMJDBAPL_00290	7.22e-28	pgdA	3.5.1.104	-	G	ko:K22278	-	ko00000,ko01000	polysaccharide deacetylase
PMJDBAPL_00291	8.8e-17	yjeA	3.5.1.104	-	G	ko:K22278	-	ko00000,ko01000	polysaccharide deacetylase
PMJDBAPL_00292	0.0	xylA	5.3.1.5	-	G	ko:K01805	ko00040,ko00051,ko01100,map00040,map00051,map01100	ko00000,ko00001,ko01000	Belongs to the xylose isomerase family
PMJDBAPL_00293	0.0	xylB	2.7.1.17, 2.7.1.53	-	G	ko:K00854,ko:K00880	ko00040,ko00053,ko01100,map00040,map00053,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the FGGY kinase family
PMJDBAPL_00294	2.61e-199	-	-	-	KT	ko:K07719	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	YcbB domain
PMJDBAPL_00295	3.21e-244	argF	2.1.3.3	-	E	ko:K00611	ko00220,ko01100,ko01110,ko01130,ko01230,map00220,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
PMJDBAPL_00296	1.13e-220	arcC	2.7.2.2	-	E	ko:K00926	ko00220,ko00230,ko00910,ko01100,ko01120,ko01200,map00220,map00230,map00910,map01100,map01120,map01200	ko00000,ko00001,ko01000	Belongs to the carbamate kinase family
PMJDBAPL_00297	5.49e-207	-	-	-	EG	-	-	-	EamA-like transporter family
PMJDBAPL_00298	1.72e-134	XK27_08875	-	-	O	-	-	-	PFAM peptidase M10A and M12B, matrixin and adamalysin
PMJDBAPL_00299	1.6e-82	-	-	-	S	-	-	-	Cupredoxin-like domain
PMJDBAPL_00300	2.2e-65	-	-	-	S	-	-	-	Cupredoxin-like domain
PMJDBAPL_00301	0.0	copA	3.6.3.3, 3.6.3.5, 3.6.3.54	-	P	ko:K01534,ko:K17686	ko01524,ko04016,map01524,map04016	ko00000,ko00001,ko01000	P-type ATPase
PMJDBAPL_00302	2.69e-114	-	-	-	-	-	-	-	-
PMJDBAPL_00304	1.28e-75	-	-	-	-	-	-	-	-
PMJDBAPL_00305	0.0	nhaP3	-	-	P	ko:K03316	-	ko00000	Sodium proton antiporter
PMJDBAPL_00312	5.82e-131	-	-	-	S	ko:K06919	-	ko00000	D5 N terminal like
PMJDBAPL_00313	1.23e-40	-	-	-	L	ko:K07491	-	ko00000	PFAM transposase IS200-family protein
PMJDBAPL_00314	1.19e-81	-	-	-	S	-	-	-	Protein of unknown function (DUF1700)
PMJDBAPL_00315	9.97e-71	psaA	-	-	P	ko:K02077,ko:K11707	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the bacterial solute-binding protein 9 family
PMJDBAPL_00316	2.88e-196	-	-	-	K	-	-	-	Transcriptional regulator, LysR family
PMJDBAPL_00317	3.16e-313	-	-	-	E	-	-	-	Peptidase family M20/M25/M40
PMJDBAPL_00318	2.06e-278	-	-	-	G	-	-	-	Transporter, major facilitator family protein
PMJDBAPL_00319	1.3e-262	menC	4.2.1.113	-	H	ko:K02549	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB)
PMJDBAPL_00320	7.83e-261	-	-	-	L	-	-	-	Transposase
PMJDBAPL_00322	1.76e-10	gtf2	-	-	M	-	-	-	A stabilizing protein that is part of the accessory SecA2 SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon. Stabilizes the glycosylation activity of Gtf1
PMJDBAPL_00323	2.15e-138	-	-	-	M	-	-	-	transferase activity, transferring glycosyl groups
PMJDBAPL_00324	1.77e-205	secY2	-	-	U	-	-	-	Part of the accessory SecA2 SecY2 system specifically required for export of
PMJDBAPL_00325	7.34e-248	-	-	-	M	-	-	-	transferase activity, transferring glycosyl groups
PMJDBAPL_00326	3.53e-269	asp2	-	-	S	ko:K12269	-	ko00000,ko02044	Accessory Sec system GspB-transporter
PMJDBAPL_00327	1.28e-198	asp3	-	-	S	ko:K12270	-	ko00000,ko02044	Accessory Sec secretory system ASP3
PMJDBAPL_00328	0.0	secA2	-	-	U	ko:K03070	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
PMJDBAPL_00329	2.86e-286	gtf1	2.4.1.52	GT4	M	ko:K00712	-	ko00000,ko01000,ko01003	An N-acetylglucosaminyl transferase that is part of the accessory SecA2 SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon
PMJDBAPL_00330	2.03e-242	gtf2	-	-	M	-	-	-	A stabilizing protein that is part of the accessory SecA2 SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon. Stabilizes the glycosylation activity of Gtf1
PMJDBAPL_00333	0.0	-	-	-	M	-	-	-	family 8
PMJDBAPL_00334	5.97e-129	-	-	-	S	-	-	-	glycosyl transferase family 2
PMJDBAPL_00335	0.0	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
PMJDBAPL_00336	0.0	-	1.8.1.9	-	C	ko:K00384	ko00450,map00450	ko00000,ko00001,ko01000	Thioredoxin domain
PMJDBAPL_00337	6.57e-136	ahpC	1.11.1.15	-	O	ko:K03386	ko04214,map04214	ko00000,ko00001,ko01000,ko04147	Peroxiredoxin
PMJDBAPL_00338	4.58e-191	sdaAA	4.3.1.17	-	E	ko:K01752	ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230	ko00000,ko00001,ko01000	L-serine dehydratase, iron-sulfur-dependent, alpha subunit
PMJDBAPL_00339	1.69e-152	sdhB	4.3.1.17	-	E	ko:K01752	ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230	ko00000,ko00001,ko01000	Serine dehydratase beta chain
PMJDBAPL_00341	2.48e-57	rpsN	-	-	J	ko:K02954	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PMJDBAPL_00342	2.76e-212	prpA3	3.1.3.16	-	T	ko:K01090	-	ko00000,ko01000	Calcineurin-like phosphoesterase superfamily domain
PMJDBAPL_00343	1.81e-291	mdtG2	-	-	EGP	ko:K08161	-	ko00000,ko02000	Transporter, major facilitator family protein
PMJDBAPL_00344	3.54e-165	menG	2.1.1.163, 2.1.1.201	-	H	ko:K03183	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
PMJDBAPL_00345	7.76e-281	-	2.1.1.14	-	E	ko:K00549	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	methionine synthase, vitamin-B12 independent
PMJDBAPL_00346	7.79e-185	XK27_00940	3.5.1.9	-	S	ko:K07130	ko00380,ko00630,ko01100,map00380,map00630,map01100	ko00000,ko00001,ko00002,ko01000	Putative cyclase
PMJDBAPL_00347	4.67e-203	menA	2.5.1.74	-	H	ko:K02548	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01006	1,4-dihydroxy-2-naphthoate
PMJDBAPL_00348	1e-222	hepT	2.5.1.30	-	H	ko:K00805	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	Belongs to the FPP GGPP synthase family
PMJDBAPL_00349	4.23e-213	lacZ	3.2.1.23	-	G	ko:K12308	ko00052,map00052	ko00000,ko00001,ko01000	-beta-galactosidase
PMJDBAPL_00350	1.59e-150	lacZ	3.2.1.23	-	G	ko:K12308	ko00052,map00052	ko00000,ko00001,ko01000	-beta-galactosidase
PMJDBAPL_00351	0.0	lacS	-	-	G	ko:K11104,ko:K16209	-	ko00000,ko02000	Transporter
PMJDBAPL_00352	1.06e-235	lacR	-	-	K	ko:K02529	-	ko00000,ko03000	Transcriptional regulator
PMJDBAPL_00353	3.81e-110	-	-	-	-	-	-	-	-
PMJDBAPL_00354	2.17e-205	xth	3.1.11.2	-	L	ko:K01142	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	exodeoxyribonuclease III
PMJDBAPL_00355	8.66e-70	-	-	-	S	-	-	-	Mazg nucleotide pyrophosphohydrolase
PMJDBAPL_00356	6.8e-46	-	-	-	-	-	-	-	-
PMJDBAPL_00357	0.0	-	-	-	L	-	-	-	Transposase
PMJDBAPL_00358	7.27e-286	aadAT	-	-	EK	ko:K05825	ko00300,ko01100,ko01130,ko01210,map00300,map01100,map01130,map01210	ko00000,ko00001,ko01000	Aminotransferase, class I
PMJDBAPL_00360	2.94e-299	-	-	-	M	-	-	-	Glycosyl transferase family group 2
PMJDBAPL_00361	3.6e-98	mnaA	5.1.3.14	-	G	ko:K01791	ko00520,ko01100,ko05111,map00520,map01100,map05111	ko00000,ko00001,ko00002,ko01000,ko01005	Belongs to the UDP-N-acetylglucosamine 2-epimerase family
PMJDBAPL_00362	6.69e-142	mnaA	5.1.3.14	-	G	ko:K01791	ko00520,ko01100,ko05111,map00520,map01100,map05111	ko00000,ko00001,ko00002,ko01000,ko01005	Belongs to the UDP-N-acetylglucosamine 2-epimerase family
PMJDBAPL_00363	3.6e-107	rplJ	-	-	J	ko:K02864	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
PMJDBAPL_00364	2.46e-72	rplL	-	-	J	ko:K02935	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
PMJDBAPL_00365	3.4e-64	-	-	-	-	-	-	-	-
PMJDBAPL_00367	6.88e-53	mscL	-	-	M	ko:K03282	-	ko00000,ko02000	Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
PMJDBAPL_00368	2.28e-292	-	-	-	L	-	-	-	Integrase core domain
PMJDBAPL_00369	1.83e-72	-	-	-	-	-	-	-	-
PMJDBAPL_00370	1.51e-148	frnE	5.3.4.1	-	Q	ko:K01829	-	ko00000,ko01000	DSBA-like thioredoxin domain
PMJDBAPL_00371	2.31e-207	-	-	-	I	-	-	-	alpha/beta hydrolase fold
PMJDBAPL_00372	3.16e-22	-	-	-	-	-	-	-	-
PMJDBAPL_00373	3.32e-204	-	-	-	L	ko:K07497	-	ko00000	hmm pf00665
PMJDBAPL_00374	5.63e-145	-	-	-	S	-	-	-	Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
PMJDBAPL_00376	5.94e-148	-	-	-	S	-	-	-	GyrI-like small molecule binding domain
PMJDBAPL_00377	2.21e-155	-	-	-	S	ko:K07507	-	ko00000,ko02000	MgtC family
PMJDBAPL_00378	3.4e-118	hpt	2.4.2.8	-	F	ko:K00760	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the purine pyrimidine phosphoribosyltransferase family
PMJDBAPL_00379	4.59e-245	flp	-	-	V	-	-	-	Beta-lactamase
PMJDBAPL_00380	2.08e-96	arsC	1.20.4.1	-	T	ko:K03741	-	ko00000,ko01000	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
PMJDBAPL_00381	1.04e-114	-	-	-	J	ko:K19055	-	ko00000,ko01000,ko03016	Aminoacyl-tRNA editing domain
PMJDBAPL_00382	5.25e-27	-	-	-	L	-	-	-	Addiction module antitoxin, RelB DinJ family
PMJDBAPL_00383	9.98e-24	-	-	-	-	-	-	-	-
PMJDBAPL_00384	0.0	comA	-	-	V	ko:K06147,ko:K06148,ko:K12292,ko:K20344	ko02010,ko02020,ko02024,map02010,map02020,map02024	ko00000,ko00001,ko01000,ko02000	ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
PMJDBAPL_00385	2.94e-152	-	-	-	K	ko:K07707	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko02022	LytTr DNA-binding domain
PMJDBAPL_00386	6.41e-270	-	2.7.13.3	-	T	ko:K07706	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	GHKL domain
PMJDBAPL_00389	1.45e-10	-	-	-	S	-	-	-	Bacteriocin class II with double-glycine leader peptide
PMJDBAPL_00392	9.05e-206	-	-	-	S	ko:K07088	-	ko00000	Membrane transport protein
PMJDBAPL_00393	3.03e-158	-	-	-	T	-	-	-	Transcriptional regulatory protein, C terminal
PMJDBAPL_00394	1.42e-304	-	-	-	T	-	-	-	GHKL domain
PMJDBAPL_00395	1.32e-138	-	-	-	S	-	-	-	Peptidase propeptide and YPEB domain
PMJDBAPL_00396	3.15e-141	-	-	-	P	-	-	-	nitric oxide dioxygenase activity
PMJDBAPL_00397	1.94e-13	-	-	-	S	ko:K07124	-	ko00000	Enoyl-(Acyl carrier protein) reductase
PMJDBAPL_00398	5.58e-70	yphJ	4.1.1.44	-	S	ko:K01607	ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220	ko00000,ko00001,ko01000	decarboxylase
PMJDBAPL_00399	8.91e-146	-	1.1.1.346	-	S	ko:K06221	-	ko00000,ko01000	Oxidoreductase, aldo keto reductase family protein
PMJDBAPL_00400	6.18e-51	-	-	-	C	-	-	-	Flavodoxin
PMJDBAPL_00401	4.68e-119	padC	-	-	Q	ko:K13727	-	ko00000,ko01000	Phenolic acid decarboxylase
PMJDBAPL_00402	3.15e-115	-	-	-	K	-	-	-	Virulence activator alpha C-term
PMJDBAPL_00403	6.71e-220	ypuA	-	-	S	-	-	-	Protein of unknown function (DUF1002)
PMJDBAPL_00404	8.09e-235	ansA	3.5.1.1	-	EJ	ko:K01424	ko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110	ko00000,ko00001,ko01000	L-asparaginase, type I
PMJDBAPL_00405	2.39e-196	-	-	-	K	-	-	-	Transcriptional regulator
PMJDBAPL_00406	1.29e-201	akr5f	1.1.1.346	-	S	ko:K06221	-	ko00000,ko01000	reductase
PMJDBAPL_00407	1.61e-81	-	-	-	-	-	-	-	-
PMJDBAPL_00408	4.89e-167	-	-	-	F	-	-	-	glutamine amidotransferase
PMJDBAPL_00410	0.0	asnS	6.1.1.22	-	J	ko:K01893	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Asparaginyl-tRNA synthetase
PMJDBAPL_00411	3.51e-253	asnA	6.3.1.1	-	F	ko:K01914	ko00250,ko00460,ko01100,ko01110,ko01230,map00250,map00460,map01100,map01110,map01230	ko00000,ko00001,ko01000	aspartate--ammonia ligase
PMJDBAPL_00412	9.51e-39	yiaC	-	-	K	ko:K03826	-	ko00000,ko01000	Acetyltransferase (GNAT) domain
PMJDBAPL_00413	5.7e-115	-	-	-	S	-	-	-	ECF transporter, substrate-specific component
PMJDBAPL_00414	0.0	pepN	3.4.11.2	-	E	ko:K01256	ko00480,ko01100,map00480,map01100	ko00000,ko00001,ko01000,ko01002	aminopeptidase
PMJDBAPL_00415	6.6e-142	-	-	-	GM	-	-	-	NAD dependent epimerase dehydratase family protein
PMJDBAPL_00416	0.0	pepE	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	aminopeptidase
PMJDBAPL_00417	8.87e-268	-	-	-	EGP	-	-	-	Major Facilitator Superfamily
PMJDBAPL_00418	1.08e-289	-	-	-	-	-	-	-	-
PMJDBAPL_00419	5.31e-99	-	-	-	K	-	-	-	Transcriptional regulator, HxlR family
PMJDBAPL_00420	5.52e-139	XK27_02070	-	-	S	ko:K07078	-	ko00000	Nitroreductase family
PMJDBAPL_00421	4.55e-68	ydeP	-	-	K	-	-	-	Transcriptional regulator, HxlR family
PMJDBAPL_00422	2e-14	-	-	-	GM	-	-	-	NmrA-like family
PMJDBAPL_00423	1.6e-93	-	-	-	S	ko:K02348	-	ko00000	Gnat family
PMJDBAPL_00424	2.3e-52	-	-	-	S	-	-	-	Cytochrome B5
PMJDBAPL_00425	8.47e-08	-	-	-	S	-	-	-	Cytochrome B5
PMJDBAPL_00426	1.29e-53	-	-	-	S	-	-	-	Cytochrome B5
PMJDBAPL_00427	1.17e-270	-	2.1.1.14	-	E	ko:K00549	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	methionine synthase, vitamin-B12 independent
PMJDBAPL_00429	4e-234	panE	1.1.1.169	-	H	ko:K00077	ko00770,ko01100,ko01110,map00770,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
PMJDBAPL_00430	1.72e-315	-	-	-	E	ko:K03294	-	ko00000	amino acid
PMJDBAPL_00431	0.0	npp	-	-	S	-	-	-	type I phosphodiesterase nucleotide pyrophosphatase
PMJDBAPL_00432	2.62e-25	yxiO	-	-	S	ko:K06902	ko04138,map04138	ko00000,ko00001,ko02000,ko04131	Vacuole effluxer Atg22 like
PMJDBAPL_00433	1.08e-146	yxiO	-	-	S	ko:K06902	ko04138,map04138	ko00000,ko00001,ko02000,ko04131	Vacuole effluxer Atg22 like
PMJDBAPL_00434	5.72e-40	yxiO	-	-	S	ko:K06902	ko04138,map04138	ko00000,ko00001,ko02000,ko04131	Vacuole effluxer Atg22 like
PMJDBAPL_00436	0.0	thrS	6.1.1.3	-	J	ko:K01868	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
PMJDBAPL_00437	2.63e-75	-	-	-	-	-	-	-	-
PMJDBAPL_00438	0.0	mntH	-	-	P	ko:K03322	-	ko00000,ko02000	H( )-stimulated, divalent metal cation uptake system
PMJDBAPL_00439	7.01e-244	-	-	-	E	-	-	-	Zinc-binding dehydrogenase
PMJDBAPL_00440	6.19e-112	-	-	-	K	-	-	-	transcriptional regulator (TetR family)
PMJDBAPL_00441	1.38e-233	yxeA	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter permease
PMJDBAPL_00442	8.51e-148	lolD	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PMJDBAPL_00443	0.0	yhcA	-	-	V	ko:K02003,ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PMJDBAPL_00444	2.79e-49	-	-	-	-	-	-	-	-
PMJDBAPL_00445	1.36e-66	czrA	-	-	K	ko:K22043	-	ko00000,ko03000	Transcriptional regulator, ArsR family
PMJDBAPL_00446	0.0	-	3.2.1.17	CBM50	NU	ko:K01185,ko:K02395,ko:K19223	-	ko00000,ko01000,ko01002,ko01011,ko02035	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
PMJDBAPL_00447	3.11e-220	scrR	-	-	K	ko:K02529,ko:K03484	-	ko00000,ko03000	Transcriptional regulator, LacI family
PMJDBAPL_00448	2.6e-33	-	-	-	-	-	-	-	-
PMJDBAPL_00449	2.43e-145	-	-	-	-	-	-	-	-
PMJDBAPL_00450	5.82e-272	yttB	-	-	EGP	-	-	-	Major Facilitator
PMJDBAPL_00451	5.38e-309	hisS	6.1.1.21	-	J	ko:K01892	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	histidyl-tRNA synthetase
PMJDBAPL_00452	7.05e-113	-	-	-	-	-	-	-	-
PMJDBAPL_00453	3.96e-138	nnrE	5.1.99.6	-	H	ko:K17759	-	ko00000,ko01000	Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S- specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX
PMJDBAPL_00454	0.0	-	-	-	S	-	-	-	Putative peptidoglycan binding domain
PMJDBAPL_00455	7.85e-21	-	-	-	-	-	-	-	-
PMJDBAPL_00456	2.32e-158	-	-	-	M	-	-	-	ErfK YbiS YcfS YnhG
PMJDBAPL_00458	2.95e-126	-	-	-	-	-	-	-	-
PMJDBAPL_00459	3.42e-278	dacA	3.4.16.4	-	M	ko:K01286,ko:K07258	ko00550,ko01100,map00550,map01100	ko00000,ko00001,ko01000,ko01002,ko01011	Belongs to the peptidase S11 family
PMJDBAPL_00460	5.86e-180	-	-	-	S	-	-	-	Alpha beta hydrolase
PMJDBAPL_00461	4.4e-268	gldA	1.1.1.6	-	C	ko:K00005	ko00561,ko00640,ko01100,map00561,map00640,map01100	ko00000,ko00001,ko01000	dehydrogenase
PMJDBAPL_00462	0.0	ltaS	2.7.8.20	-	M	ko:K19005	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
PMJDBAPL_00463	1.45e-55	-	-	-	-	-	-	-	-
PMJDBAPL_00464	5.5e-161	pgm3	-	-	G	-	-	-	phosphoglycerate mutase family
PMJDBAPL_00465	0.0	-	-	-	S	-	-	-	C4-dicarboxylate anaerobic carrier
PMJDBAPL_00466	2.66e-316	nhaC	-	-	C	ko:K03315	-	ko00000,ko02000	Na H antiporter NhaC
PMJDBAPL_00467	4.79e-307	pbuX	-	-	F	ko:K03458,ko:K16169	-	ko00000,ko02000	xanthine permease
PMJDBAPL_00468	0.0	pepD1	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
PMJDBAPL_00469	8.21e-216	corA	-	-	P	ko:K03284	-	ko00000,ko02000	CorA-like Mg2+ transporter protein
PMJDBAPL_00470	1.95e-219	rluA	5.4.99.23, 5.4.99.28, 5.4.99.29	-	J	ko:K06177,ko:K06180	-	ko00000,ko01000,ko03009,ko03016	Responsible for synthesis of pseudouridine from uracil
PMJDBAPL_00471	3.78e-169	yceF	-	-	P	ko:K05794	-	ko00000	membrane
PMJDBAPL_00472	6.46e-74	trxA	-	-	O	ko:K03671	ko04621,ko05418,map04621,map05418	ko00000,ko00001,ko03110	Belongs to the thioredoxin family
PMJDBAPL_00473	2.61e-138	-	-	-	L	-	-	-	nuclease
PMJDBAPL_00474	0.0	XK27_00340	3.1.3.5	-	F	ko:K01081	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the 5'-nucleotidase family
PMJDBAPL_00475	1.24e-90	-	-	-	-	-	-	-	-
PMJDBAPL_00476	3.38e-132	-	-	-	D	ko:K04095	-	ko00000,ko03036	Fic/DOC family
PMJDBAPL_00477	3.94e-158	nagB	3.5.99.6	-	G	ko:K02564	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
PMJDBAPL_00478	1.06e-193	-	-	-	G	-	-	-	Belongs to the phosphoglycerate mutase family
PMJDBAPL_00479	2.08e-277	-	-	-	-	-	-	-	-
PMJDBAPL_00480	0.0	-	-	-	-	-	-	-	-
PMJDBAPL_00481	0.0	-	-	-	-	-	-	-	-
PMJDBAPL_00483	2.21e-275	ddl	6.3.2.4	-	F	ko:K01921	ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Belongs to the D-alanine--D-alanine ligase family
PMJDBAPL_00484	1.21e-63	gcsH2	-	-	E	ko:K02437	ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200	ko00000,ko00001,ko00002	glycine cleavage
PMJDBAPL_00485	9.49e-282	rodA	-	-	D	ko:K05837	-	ko00000,ko03036	Belongs to the SEDS family
PMJDBAPL_00486	9.31e-44	-	-	-	S	-	-	-	Protein of unknown function (DUF2969)
PMJDBAPL_00487	1.49e-226	mbl	-	-	D	ko:K03569	-	ko00000,ko02048,ko03036,ko04812	Cell shape determining protein MreB Mrl
PMJDBAPL_00488	1.74e-307	murA	2.5.1.7	-	M	ko:K00790	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PMJDBAPL_00489	1.76e-45	ywzB	-	-	S	-	-	-	Protein of unknown function (DUF1146)
PMJDBAPL_00490	3e-88	atpC	-	-	C	ko:K02114	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Produces ATP from ADP in the presence of a proton gradient across the membrane
PMJDBAPL_00491	0.0	atpD	3.6.3.14	-	C	ko:K02112	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko01000	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
PMJDBAPL_00492	1.07e-211	atpG	-	-	C	ko:K02115	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
PMJDBAPL_00493	0.0	atpA	3.6.3.14	-	C	ko:K02111	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko01000	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
PMJDBAPL_00494	2.79e-120	atpH	-	-	C	ko:K02113	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PMJDBAPL_00495	1.07e-95	atpF	-	-	C	ko:K02109	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
PMJDBAPL_00496	1.26e-29	atpE	-	-	C	ko:K02110	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PMJDBAPL_00497	5.4e-161	atpB	-	-	C	ko:K02108	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko03110	it plays a direct role in the translocation of protons across the membrane
PMJDBAPL_00498	9.76e-295	pyrP	-	-	F	ko:K02824	-	ko00000,ko02000	Permease
PMJDBAPL_00499	6.41e-164	yibF	-	-	S	-	-	-	overlaps another CDS with the same product name
PMJDBAPL_00500	1.65e-246	yibE	-	-	S	-	-	-	overlaps another CDS with the same product name
PMJDBAPL_00501	0.0	ptsI	2.7.3.9	-	G	ko:K08483	ko02060,map02060	ko00000,ko00001,ko01000,ko02000	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
PMJDBAPL_00502	6.68e-150	upp	2.4.2.9	-	F	ko:K00761	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
PMJDBAPL_00503	2.12e-292	glyA	2.1.2.1	-	E	ko:K00600	ko00260,ko00460,ko00630,ko00670,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko01523,map00260,map00460,map00630,map00670,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map01523	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
PMJDBAPL_00504	2.67e-251	ywlC	2.7.7.87	-	J	ko:K07566	-	ko00000,ko01000,ko03009,ko03016	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
PMJDBAPL_00505	1.59e-209	prmC	2.1.1.297	-	J	ko:K02493	-	ko00000,ko01000,ko03012	Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
PMJDBAPL_00506	1.73e-248	prfA	-	-	J	ko:K02835	-	ko00000,ko03012	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
PMJDBAPL_00507	6.8e-140	tdk	2.7.1.21	-	F	ko:K00857	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	thymidine kinase
PMJDBAPL_00508	0.0	murE2	6.3.2.13	-	M	ko:K01928	ko00300,ko00550,map00300,map00550	ko00000,ko00001,ko01000,ko01011	Mur ligase, middle domain
PMJDBAPL_00509	1.98e-172	-	-	-	S	ko:K07009	-	ko00000	CobB/CobQ-like glutamine amidotransferase domain
PMJDBAPL_00510	4.62e-296	potE	-	-	U	ko:K03756,ko:K03758	-	ko00000,ko02000	Amino acid permease
PMJDBAPL_00511	0.0	arcD	-	-	E	ko:K03758	-	ko00000,ko02000	Arginine ornithine antiporter
PMJDBAPL_00512	7.2e-103	argR	-	-	K	ko:K03402	-	ko00000,ko03000	Regulates arginine biosynthesis genes
PMJDBAPL_00513	1.25e-304	arcA	3.5.3.6	-	E	ko:K01478	ko00220,ko01100,ko01110,ko01130,map00220,map01100,map01110,map01130	ko00000,ko00001,ko01000	Arginine
PMJDBAPL_00514	1.44e-22	ampC	-	-	V	-	-	-	Beta-lactamase
PMJDBAPL_00515	1.63e-176	ampC	-	-	V	-	-	-	Beta-lactamase
PMJDBAPL_00516	3.67e-78	-	-	-	-	-	-	-	-
PMJDBAPL_00517	0.0	-	-	-	M	-	-	-	domain protein
PMJDBAPL_00518	2.27e-138	-	-	-	-	-	-	-	-
PMJDBAPL_00520	2.03e-168	int2	-	-	L	-	-	-	Belongs to the 'phage' integrase family
PMJDBAPL_00521	3.04e-65	-	-	-	L	-	-	-	Bacterial dnaA protein
PMJDBAPL_00522	5.24e-110	-	-	-	L	-	-	-	Transposase
PMJDBAPL_00523	2.72e-303	-	-	-	L	-	-	-	Integrase core domain
PMJDBAPL_00524	1.01e-170	-	-	-	O	-	-	-	Bacterial dnaA protein
PMJDBAPL_00525	2.15e-102	isp	-	-	L	-	-	-	Transposase
PMJDBAPL_00526	0.0	-	2.4.1.5	GH13	G	ko:K00689	ko00500,ko02020,map00500,map02020	ko00000,ko00001,ko01000	Glycosyl hydrolase family 70
PMJDBAPL_00527	0.0	-	2.4.1.5	GH13	G	ko:K00689	ko00500,ko02020,map00500,map02020	ko00000,ko00001,ko01000	Glycosyl hydrolase family 70
PMJDBAPL_00528	3.06e-193	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
PMJDBAPL_00529	3.32e-204	-	-	-	L	ko:K07497	-	ko00000	hmm pf00665
PMJDBAPL_00530	0.0	cysS	6.1.1.16	-	J	ko:K01883	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-I aminoacyl-tRNA synthetase family
PMJDBAPL_00531	8.79e-94	mrnC	-	-	J	ko:K11145	-	ko00000,ko01000,ko03009	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
PMJDBAPL_00532	6.35e-176	trmH	2.1.1.185	-	J	ko:K03218	-	ko00000,ko01000,ko03009	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PMJDBAPL_00533	2.18e-29	rpmG	-	-	J	ko:K02913	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL33 family
PMJDBAPL_00534	7.11e-32	secE	-	-	U	ko:K03073	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
PMJDBAPL_00535	1.1e-126	nusG	-	-	K	ko:K02601	-	ko00000,ko03009,ko03021	Participates in transcription elongation, termination and antitermination
PMJDBAPL_00536	1.39e-92	rplK	-	-	J	ko:K02867	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
PMJDBAPL_00537	8.31e-158	rplA	-	-	J	ko:K02863	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
PMJDBAPL_00538	1.89e-129	rfbB	4.2.1.46	-	M	ko:K01710	ko00521,ko00523,ko00525,ko01055,ko01130,map00521,map00523,map00525,map01055,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
PMJDBAPL_00539	7.75e-98	rfbD	1.1.1.133	-	M	ko:K00067	ko00521,ko00523,ko01130,map00521,map00523,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
PMJDBAPL_00540	1.24e-75	rfbD	1.1.1.133	-	M	ko:K00067	ko00521,ko00523,ko01130,map00521,map00523,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
PMJDBAPL_00541	1.68e-193	rfbB	4.2.1.46	-	M	ko:K01710	ko00521,ko00523,ko00525,ko01055,ko01130,map00521,map00523,map00525,map01055,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
PMJDBAPL_00542	1.52e-86	-	-	-	L	ko:K07482	-	ko00000	Helix-turn-helix domain
PMJDBAPL_00543	6.56e-97	-	-	-	S	-	-	-	polysaccharide biosynthetic process
PMJDBAPL_00544	4.26e-54	-	-	-	M	-	-	-	Capsular polysaccharide synthesis protein
PMJDBAPL_00545	2.34e-44	-	-	-	M	-	-	-	Glycosyl transferase, family 2
PMJDBAPL_00547	5.34e-112	-	-	-	M	-	-	-	Glycosyl transferase family 2
PMJDBAPL_00548	7.24e-66	capM	-	-	M	ko:K13012	-	ko00000,ko01005	Bacterial sugar transferase
PMJDBAPL_00549	7.99e-154	ywqD	-	-	D	-	-	-	Capsular exopolysaccharide family
PMJDBAPL_00550	1.15e-183	epsB	-	-	M	-	-	-	biosynthesis protein
PMJDBAPL_00551	1.1e-213	brpA	-	-	K	-	-	-	Cell envelope-like function transcriptional attenuator common domain protein
PMJDBAPL_00552	5.59e-90	-	-	-	K	-	-	-	Transcriptional regulator, HxlR family
PMJDBAPL_00553	1.49e-165	-	-	-	-	-	-	-	-
PMJDBAPL_00554	1e-132	-	-	-	K	-	-	-	DNA-templated transcription, initiation
PMJDBAPL_00555	1.61e-48	-	-	-	-	-	-	-	-
PMJDBAPL_00556	1.11e-106	-	-	-	-	-	-	-	-
PMJDBAPL_00557	0.0	glpK	2.7.1.30	-	F	ko:K00864	ko00561,ko01100,ko03320,ko04626,map00561,map01100,map03320,map04626	ko00000,ko00001,ko01000,ko04147	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
PMJDBAPL_00558	1.1e-34	dmpI	5.3.2.6	-	G	ko:K01821	ko00362,ko00621,ko00622,ko01100,ko01120,ko01220,map00362,map00621,map00622,map01100,map01120,map01220	ko00000,ko00001,ko00002,ko01000	Belongs to the 4-oxalocrotonate tautomerase family
PMJDBAPL_00559	0.0	yjbQ	-	-	P	ko:K03455,ko:K03499	-	ko00000,ko02000	TrkA C-terminal domain protein
PMJDBAPL_00560	0.0	pepD4	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
PMJDBAPL_00563	1.99e-264	rfbB	4.2.1.46	-	M	ko:K01710	ko00521,ko00523,ko00525,ko01055,ko01130,map00521,map00523,map00525,map01055,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
PMJDBAPL_00564	9.26e-139	rfbC	5.1.3.13	-	M	ko:K01790	ko00521,ko00523,ko01130,map00521,map00523,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
PMJDBAPL_00565	3.06e-203	rfbA	2.7.7.24	-	H	ko:K00973	ko00521,ko00523,ko00525,ko01130,map00521,map00523,map00525,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
PMJDBAPL_00566	0.0	-	-	CBM50	NU	ko:K02395,ko:K19223	-	ko00000,ko01000,ko01002,ko01011,ko02035	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
PMJDBAPL_00567	3.29e-183	-	-	-	M	-	-	-	Glycosyl transferase family 2
PMJDBAPL_00568	2.58e-94	-	-	-	-	-	-	-	-
PMJDBAPL_00569	1e-90	-	-	-	S	-	-	-	Acyltransferase family
PMJDBAPL_00570	5.73e-97	-	-	-	S	ko:K07011	-	ko00000	Glycosyltransferase, group 2 family protein
PMJDBAPL_00571	7.27e-83	-	-	-	S	-	-	-	Glycosyltransferase like family
PMJDBAPL_00572	7.78e-96	-	-	GT2	M	ko:K12997	-	ko00000,ko01000,ko01003,ko01005	Glycosyl transferase family 2
PMJDBAPL_00573	9.63e-38	-	-	-	M	-	-	-	biosynthesis protein
PMJDBAPL_00574	1.23e-107	-	-	-	-	-	-	-	-
PMJDBAPL_00575	1.72e-94	-	-	-	M	-	-	-	transferase activity, transferring glycosyl groups
PMJDBAPL_00576	1.62e-263	cps1C	-	-	S	ko:K03328	-	ko00000	Membrane protein involved in the export of O-antigen and teichoic acid
PMJDBAPL_00577	4.12e-277	glf	5.4.99.9	-	M	ko:K01854	ko00052,ko00520,map00052,map00520	ko00000,ko00001,ko01000	UDP-galactopyranose mutase
PMJDBAPL_00578	5.49e-114	isp	-	-	L	-	-	-	Transposase
PMJDBAPL_00579	4.4e-152	-	5.1.1.13	-	M	ko:K01779	ko00250,ko01054,map00250,map01054	ko00000,ko00001,ko01000	Asp/Glu/Hydantoin racemase
PMJDBAPL_00580	4.25e-145	ung2	-	-	L	-	-	-	Uracil-DNA glycosylase
PMJDBAPL_00581	3.96e-145	fnr	-	-	K	ko:K21562	-	ko00000,ko03000	Transcriptional regulator, Crp Fnr family
PMJDBAPL_00582	1.82e-123	dpsB	-	-	P	-	-	-	Belongs to the Dps family
PMJDBAPL_00583	2.25e-45	-	-	-	C	-	-	-	Heavy-metal-associated domain
PMJDBAPL_00584	0.0	cadA	3.6.3.3, 3.6.3.5	-	P	ko:K01534	-	ko00000,ko01000	E1-E2 ATPase
PMJDBAPL_00585	1.76e-133	-	-	-	-	-	-	-	-
PMJDBAPL_00586	0.0	rumA_2	2.1.1.190	-	J	ko:K03215	-	ko00000,ko01000,ko03009	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PMJDBAPL_00587	1.64e-237	dagK	2.7.1.107	-	G	ko:K07029	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko01000	Lipid kinase
PMJDBAPL_00588	0.0	gatB	6.3.5.6, 6.3.5.7	-	J	ko:K02434	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PMJDBAPL_00589	0.0	gatA	6.3.5.6, 6.3.5.7	-	J	ko:K02433	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
PMJDBAPL_00590	1.36e-66	gatC	6.3.5.6, 6.3.5.7	-	J	ko:K02435	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PMJDBAPL_00591	1.11e-260	camS	-	-	S	-	-	-	sex pheromone
PMJDBAPL_00592	0.0	ligA	6.5.1.2	-	L	ko:K01972	ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430	ko00000,ko00001,ko01000,ko03032,ko03400	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
PMJDBAPL_00593	0.0	pcrA	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	ATP-dependent DNA helicase
PMJDBAPL_00594	3.11e-270	purK2	6.3.4.18	-	F	ko:K01589	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
PMJDBAPL_00595	2.36e-131	xpt	2.4.2.22	-	F	ko:K03816	ko00230,ko01100,ko01110,map00230,map01100,map01110	ko00000,ko00001,ko01000	Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
PMJDBAPL_00596	3.07e-149	acmA	3.2.1.17, 3.2.1.96	-	NU	ko:K01185,ko:K01227	ko00511,map00511	ko00000,ko00001,ko01000	mannosyl-glycoprotein
PMJDBAPL_00597	6.34e-180	budC	1.1.1.304, 1.1.1.76	-	IQ	ko:K03366	ko00650,map00650	ko00000,ko00001,ko01000	reductase
PMJDBAPL_00598	3.94e-85	rpsI	-	-	J	ko:K02996	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uS9 family
PMJDBAPL_00599	9.25e-103	rplM	-	-	J	ko:K02871	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
PMJDBAPL_00600	4.31e-182	truA	5.4.99.12	-	J	ko:K06173	-	ko00000,ko01000,ko03016	Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
PMJDBAPL_00601	1.17e-180	ecfT	-	-	U	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PMJDBAPL_00602	5.87e-196	ecfA2	-	-	P	ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PMJDBAPL_00603	1.95e-183	ecfA1	-	-	P	ko:K16786	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PMJDBAPL_00604	8.08e-83	rplQ	-	-	J	ko:K02879	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L17
PMJDBAPL_00605	2.19e-220	rpoA	2.7.7.6	-	K	ko:K03040	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PMJDBAPL_00606	1.62e-83	rpsK	-	-	J	ko:K02948	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
PMJDBAPL_00607	1.54e-75	rpsM	-	-	J	ko:K02952	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
PMJDBAPL_00608	5.79e-21	rpmJ	-	-	J	ko:K02919	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL36 family
PMJDBAPL_00609	2.41e-45	infA	-	-	J	ko:K02518	-	ko00000,ko03012	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
PMJDBAPL_00610	1.51e-159	adk	2.7.4.3	-	F	ko:K00939	ko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
PMJDBAPL_00611	2.88e-306	secY	-	-	U	ko:K03076	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
PMJDBAPL_00612	6.05e-93	rplO	-	-	J	ko:K02876	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to the 23S rRNA
PMJDBAPL_00613	5.94e-34	rpmD	-	-	J	ko:K02907	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L30
PMJDBAPL_00614	5.95e-112	rpsE	-	-	J	ko:K02988	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
PMJDBAPL_00615	5.03e-75	rplR	-	-	J	ko:K02881	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
PMJDBAPL_00616	8.7e-123	rplF	-	-	J	ko:K02933	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
PMJDBAPL_00617	1.54e-87	rpsH	-	-	J	ko:K02994	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
PMJDBAPL_00618	4.97e-40	rpsN	-	-	J	ko:K02954	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PMJDBAPL_00619	7.42e-125	rplE	-	-	J	ko:K02931	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
PMJDBAPL_00620	2.58e-65	rplX	-	-	J	ko:K02895	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
PMJDBAPL_00621	3.62e-79	rplN	-	-	J	ko:K02874	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
PMJDBAPL_00622	1.1e-55	rpsQ	-	-	J	ko:K02961	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
PMJDBAPL_00623	5.49e-38	rpmC	-	-	J	ko:K02904	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uL29 family
PMJDBAPL_00624	1.96e-98	rplP	-	-	J	ko:K02878	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
PMJDBAPL_00625	9.81e-157	rpsC	-	-	J	ko:K02982	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
PMJDBAPL_00626	4.36e-70	rplV	-	-	J	ko:K02890	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
PMJDBAPL_00627	5.72e-62	rpsS	-	-	J	ko:K02965	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
PMJDBAPL_00628	1.16e-203	rplB	-	-	J	ko:K02886	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
PMJDBAPL_00629	1.04e-60	rplW	-	-	J	ko:K02892	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
PMJDBAPL_00630	6.64e-139	rplD	-	-	J	ko:K02926	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the polypeptide exit tunnel
PMJDBAPL_00631	5.45e-153	rplC	-	-	J	ko:K02906	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
PMJDBAPL_00632	1.05e-64	rpsJ	-	-	J	ko:K02946	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Involved in the binding of tRNA to the ribosomes
PMJDBAPL_00635	1.81e-06	-	-	-	-	-	-	-	-
PMJDBAPL_00636	8.34e-183	soj	-	-	D	-	-	-	CobQ CobB MinD ParA nucleotide binding domain protein
PMJDBAPL_00637	3.83e-51	-	-	-	-	-	-	-	-
PMJDBAPL_00638	3.66e-47	-	-	-	S	-	-	-	Flavodoxin-like fold
PMJDBAPL_00641	7.59e-138	salB	-	-	V	ko:K20385	ko02024,map02024	ko00000,ko00001	Domain of unknown function (DUF4135)
PMJDBAPL_00642	2.79e-214	comA	-	-	V	ko:K06147,ko:K06148,ko:K12292,ko:K20344	ko02010,ko02020,ko02024,map02010,map02020,map02024	ko00000,ko00001,ko01000,ko02000	ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
PMJDBAPL_00644	6.05e-20	-	2.7.13.3	-	T	ko:K07706	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	GHKL domain
PMJDBAPL_00645	1.44e-23	-	-	-	K	ko:K07707	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko02022	LytTr DNA-binding domain
PMJDBAPL_00646	1.96e-56	-	-	-	-	-	-	-	-
PMJDBAPL_00647	9.19e-121	-	-	-	L	-	-	-	Integrase
PMJDBAPL_00648	3.12e-40	-	-	-	L	ko:K07473	-	ko00000,ko02048	RelB antitoxin
PMJDBAPL_00649	4.29e-55	-	-	-	S	ko:K19157	-	ko00000,ko01000,ko02048	Bacterial toxin of type II toxin-antitoxin system, YafQ
PMJDBAPL_00656	1.95e-109	uspA	-	-	T	-	-	-	universal stress protein
PMJDBAPL_00657	3.61e-61	-	-	-	-	-	-	-	-
PMJDBAPL_00658	3.12e-308	rarA	-	-	L	ko:K07478	-	ko00000	recombination factor protein RarA
PMJDBAPL_00659	1.67e-110	XK27_05190	-	-	S	-	-	-	Protein of unknown function (DUF1694)
PMJDBAPL_00660	1.97e-28	-	-	-	-	-	-	-	-
PMJDBAPL_00661	1.16e-97	-	4.4.1.5	-	E	ko:K01759	ko00620,map00620	ko00000,ko00001,ko01000	Glyoxalase
PMJDBAPL_00662	2.41e-179	-	-	-	S	-	-	-	Membrane
PMJDBAPL_00663	2.12e-174	-	-	-	S	ko:K09861	-	ko00000	Belongs to the UPF0246 family
PMJDBAPL_00664	0.0	spxB	1.2.3.3, 1.2.5.1, 2.2.1.6, 4.1.1.8	-	EH	ko:K00156,ko:K00158,ko:K01577,ko:K01652	ko00290,ko00620,ko00630,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00620,map00630,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the TPP enzyme family
PMJDBAPL_00665	0.0	frc	2.8.3.16	-	C	ko:K07749	-	ko00000,ko01000	Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
PMJDBAPL_00666	1.12e-300	pbuG	-	-	S	ko:K06901	-	ko00000,ko02000	permease
PMJDBAPL_00667	0.0	gadB	4.1.1.15, 4.1.2.27	-	E	ko:K01580,ko:K01634	ko00250,ko00410,ko00430,ko00600,ko00650,ko01100,ko01110,ko01120,ko02024,ko04071,ko04727,ko04940,map00250,map00410,map00430,map00600,map00650,map01100,map01110,map01120,map02024,map04071,map04727,map04940	ko00000,ko00001,ko00002,ko01000	Belongs to the group II decarboxylase family
PMJDBAPL_00668	0.0	gadC	-	-	E	ko:K20265	ko02024,map02024	ko00000,ko00001,ko02000	amino acid
PMJDBAPL_00669	7.61e-217	glsA	3.5.1.2	-	E	ko:K01425	ko00220,ko00250,ko00471,ko01100,ko04724,ko04727,ko04964,ko05206,ko05230,map00220,map00250,map00471,map01100,map04724,map04727,map04964,map05206,map05230	ko00000,ko00001,ko01000	Belongs to the glutaminase family
PMJDBAPL_00670	0.0	gadC	-	-	E	ko:K20265	ko02024,map02024	ko00000,ko00001,ko02000	amino acid
PMJDBAPL_00671	5.96e-139	rpsD	-	-	J	ko:K02986	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
PMJDBAPL_00672	0.0	ezrA	-	-	D	ko:K06286	-	ko00000,ko03036	modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
PMJDBAPL_00673	8.29e-273	iscS2	2.8.1.7	-	E	ko:K04487	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko02048,ko03016,ko03029	Aminotransferase class V
PMJDBAPL_00674	1.67e-291	thiI	2.8.1.4	-	H	ko:K03151	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko03016	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
PMJDBAPL_00675	0.0	valS	6.1.1.9	-	J	ko:K01873	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
PMJDBAPL_00676	0.0	cydA	1.10.3.14	-	C	ko:K00425	ko00190,ko01100,ko02020,map00190,map01100,map02020	ko00000,ko00001,ko00002,ko01000	ubiquinol oxidase
PMJDBAPL_00677	2.82e-235	cydB	1.10.3.14	-	C	ko:K00426	ko00190,ko01100,ko02020,map00190,map01100,map02020	ko00000,ko00001,ko00002,ko01000	Cytochrome d ubiquinol oxidase subunit II
PMJDBAPL_00678	0.0	cydC	-	-	CO	ko:K16013	ko02010,map02010	ko00000,ko00001,ko02000	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
PMJDBAPL_00679	0.0	cydD	-	-	CO	ko:K16012	ko02010,map02010	ko00000,ko00001,ko02000	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
PMJDBAPL_00680	1.05e-293	yumB	1.6.99.3	-	C	ko:K03885	ko00190,map00190	ko00000,ko00001,ko01000	NADH dehydrogenase
PMJDBAPL_00681	1.06e-312	folC	6.3.2.12, 6.3.2.17	-	H	ko:K11754	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the folylpolyglutamate synthase family
PMJDBAPL_00682	3.6e-158	radC	-	-	L	ko:K03630	-	ko00000	DNA repair protein
PMJDBAPL_00683	8.33e-230	mreB	-	-	D	ko:K03569	-	ko00000,ko02048,ko03036,ko04812	cell shape determining protein MreB
PMJDBAPL_00684	1.1e-194	mreC	-	-	M	ko:K03570	-	ko00000,ko03036	Involved in formation and maintenance of cell shape
PMJDBAPL_00685	1.97e-119	mreD	-	-	M	ko:K03571	-	ko00000,ko03036	rod shape-determining protein MreD
PMJDBAPL_00686	3.13e-141	yecS_2	-	-	P	ko:K02029,ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter permease
PMJDBAPL_00687	1.02e-151	glnQ	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
PMJDBAPL_00688	6.7e-204	aatB	-	-	ET	ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter substrate-binding protein
PMJDBAPL_00689	4.11e-292	ymfF	-	-	S	-	-	-	Peptidase M16 inactive domain protein
PMJDBAPL_00690	4.81e-316	ymfH	-	-	S	-	-	-	Peptidase M16
PMJDBAPL_00691	7.23e-190	-	-	-	S	-	-	-	Helix-turn-helix domain
PMJDBAPL_00692	2.35e-133	pgsA	2.7.8.5	-	I	ko:K00995	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
PMJDBAPL_00693	6.81e-291	cinA	3.5.1.42	-	S	ko:K03742,ko:K03743	ko00760,map00760	ko00000,ko00001,ko01000	Belongs to the CinA family
PMJDBAPL_00694	7.67e-252	recA	-	-	L	ko:K03553	ko03440,map03440	ko00000,ko00001,ko00002,ko03400	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
PMJDBAPL_00695	1.32e-275	rny	-	-	S	ko:K18682	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	Endoribonuclease that initiates mRNA decay
PMJDBAPL_00696	0.0	mutS	-	-	L	ko:K03555	ko03430,map03430	ko00000,ko00001,ko03400	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
PMJDBAPL_00697	0.0	mutL	-	-	L	ko:K03572	ko03430,map03430	ko00000,ko00001,ko03400	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
PMJDBAPL_00698	8.76e-131	ruvA	3.6.4.12	-	L	ko:K03550	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
PMJDBAPL_00699	2.86e-244	ruvB	3.6.4.12	-	L	ko:K03551	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
PMJDBAPL_00700	2.56e-250	tgt	2.4.2.29	-	F	ko:K00773	-	ko00000,ko01000,ko03016	Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
PMJDBAPL_00701	1.52e-61	yajC	-	-	U	ko:K03210	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Preprotein translocase
PMJDBAPL_00702	5.05e-233	nrnA	3.1.13.3, 3.1.3.7	-	S	ko:K06881	ko00920,ko01100,ko01120,map00920,map01100,map01120	ko00000,ko00001,ko01000,ko03400	DHHA1 domain protein
PMJDBAPL_00703	0.0	cshB	3.6.4.13	-	JKL	ko:K05592,ko:K18692	ko03018,map03018	ko00000,ko00001,ko01000,ko03009,ko03019	DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
PMJDBAPL_00704	0.0	alaS	6.1.1.7	-	J	ko:K01872	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
PMJDBAPL_00705	8.03e-58	yrzL	-	-	S	-	-	-	Belongs to the UPF0297 family
PMJDBAPL_00706	3.62e-100	yrrK	-	-	J	ko:K07447	-	ko00000,ko01000	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
PMJDBAPL_00707	3.75e-63	yrzB	-	-	S	-	-	-	Belongs to the UPF0473 family
PMJDBAPL_00708	8.35e-121	cvpA	-	-	S	-	-	-	Colicin V production protein
PMJDBAPL_00709	0.0	mutS2	-	-	L	ko:K07456	ko03430,map03430	ko00000,ko00001,ko03400	Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
PMJDBAPL_00710	2.86e-72	trxA	-	-	O	ko:K03671	ko04621,ko05418,map04621,map05418	ko00000,ko00001,ko03110	Belongs to the thioredoxin family
PMJDBAPL_00711	1.43e-124	yslB	-	-	S	-	-	-	Protein of unknown function (DUF2507)
PMJDBAPL_00712	1.89e-186	murI	3.6.1.66, 5.1.1.3	-	M	ko:K01776,ko:K02428	ko00230,ko00471,ko01100,map00230,map00471,map01100	ko00000,ko00001,ko01000,ko01011	Provides the (R)-glutamate required for cell wall biosynthesis
PMJDBAPL_00713	1.41e-134	rdgB	3.6.1.66	-	F	ko:K02428	ko00230,map00230	ko00000,ko00001,ko01000	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
PMJDBAPL_00714	9.11e-123	-	-	-	S	ko:K07095	-	ko00000	Phosphoesterase
PMJDBAPL_00715	3.62e-100	ykuL	-	-	S	-	-	-	(CBS) domain
PMJDBAPL_00716	1.91e-196	-	-	-	S	-	-	-	haloacid dehalogenase-like hydrolase
PMJDBAPL_00717	1.86e-189	ykuT	-	-	M	ko:K16052,ko:K22044	-	ko00000,ko02000	mechanosensitive ion channel
PMJDBAPL_00718	4.21e-69	ytxG	-	-	S	-	-	-	protein containing a divergent version of the methyl-accepting chemotaxis-like domain
PMJDBAPL_00719	1.84e-75	-	-	-	-	-	-	-	-
PMJDBAPL_00720	1.26e-268	pepQ	3.4.13.9	-	E	ko:K01271	-	ko00000,ko01000,ko01002	Creatinase/Prolidase N-terminal domain
PMJDBAPL_00721	3.28e-233	ccpA	-	-	K	ko:K02529	-	ko00000,ko03000	catabolite control protein A
PMJDBAPL_00722	1.15e-178	-	-	-	-	-	-	-	-
PMJDBAPL_00723	6.05e-169	yebC	-	-	K	-	-	-	Transcriptional regulatory protein
PMJDBAPL_00724	1.2e-234	comGA	-	-	NU	ko:K02243	-	ko00000,ko00002,ko02044	Type II IV secretion system protein
PMJDBAPL_00725	8.3e-231	comGB	-	-	NU	ko:K02244	-	ko00000,ko00002,ko02044	type II secretion system
PMJDBAPL_00726	1.27e-61	comGC	-	-	U	ko:K02245	-	ko00000,ko00002,ko02044	competence protein ComGC
PMJDBAPL_00727	1.01e-100	-	-	-	NU	ko:K02246	-	ko00000,ko00002,ko02044	general secretion pathway protein
PMJDBAPL_00728	1.13e-54	-	-	-	-	-	-	-	-
PMJDBAPL_00729	1.55e-90	-	-	-	-	ko:K02248	-	ko00000,ko00002,ko02044	-
PMJDBAPL_00730	1.46e-185	ytxK	2.1.1.72	-	L	ko:K00571	-	ko00000,ko01000,ko02048	N-6 DNA Methylase
PMJDBAPL_00731	1.36e-286	ackA	2.7.2.1	-	F	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PMJDBAPL_00732	9.97e-152	-	-	-	S	-	-	-	Calcineurin-like phosphoesterase
PMJDBAPL_00733	3.03e-129	yutD	-	-	S	-	-	-	Protein of unknown function (DUF1027)
PMJDBAPL_00734	2.05e-180	nagD	3.1.3.41	-	G	ko:K01101	ko00627,ko01120,map00627,map01120	ko00000,ko00001,ko01000	Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
PMJDBAPL_00735	9.74e-146	-	-	-	S	-	-	-	Protein of unknown function (DUF1461)
PMJDBAPL_00736	1.06e-148	dedA	-	-	S	ko:K03975	-	ko00000	SNARE-like domain protein
PMJDBAPL_00737	2.44e-265	yacL	-	-	S	-	-	-	domain protein
PMJDBAPL_00738	0.0	radA	-	-	O	ko:K04485	-	ko00000,ko03400	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
PMJDBAPL_00739	1.69e-129	dut	3.6.1.23	-	F	ko:K01520	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	dUTP diphosphatase
PMJDBAPL_00740	1.93e-65	yjdJ	-	-	S	ko:K06975	-	ko00000	GCN5-related N-acetyl-transferase
PMJDBAPL_00741	7.17e-162	rpiA	5.3.1.6	-	G	ko:K01807	ko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
PMJDBAPL_00742	0.0	pepC	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	Peptidase C1-like family
PMJDBAPL_00743	4.28e-181	tcyA	-	-	ET	ko:K02424	ko02010,map02010	ko00000,ko00001,ko00002,ko02000,ko02035	Belongs to the bacterial solute-binding protein 3 family
PMJDBAPL_00744	1.32e-168	-	-	-	E	ko:K10010	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
PMJDBAPL_00745	6.77e-154	tcyB	-	-	E	ko:K10009	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
PMJDBAPL_00746	4.46e-276	mccB	4.4.1.1, 4.4.1.2, 4.4.1.8	-	E	ko:K01760,ko:K17217	ko00260,ko00270,ko00450,ko00920,ko01100,ko01110,ko01130,ko01230,map00260,map00270,map00450,map00920,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	cystathionine
PMJDBAPL_00747	8.91e-216	-	-	-	I	-	-	-	alpha/beta hydrolase fold
PMJDBAPL_00748	1.76e-171	gpmA1	5.4.2.11	-	G	ko:K01834	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PMJDBAPL_00749	0.0	-	-	-	S	-	-	-	Bacterial membrane protein, YfhO
PMJDBAPL_00750	1.29e-235	lacM	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	beta-galactosidase
PMJDBAPL_00751	0.0	lacL	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 2 family
PMJDBAPL_00752	0.0	-	-	-	L	-	-	-	Transposase
PMJDBAPL_00753	2.37e-187	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
PMJDBAPL_00754	8.5e-100	-	-	-	L	ko:K07491	-	ko00000	Transposase IS200 like
PMJDBAPL_00755	6.05e-290	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
PMJDBAPL_00756	1.11e-51	-	-	-	-	-	-	-	-
PMJDBAPL_00757	3.21e-267	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
PMJDBAPL_00758	3.03e-83	rplS	-	-	J	ko:K02884	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
PMJDBAPL_00759	0.0	-	-	-	E	ko:K03294	-	ko00000	amino acid
PMJDBAPL_00760	7.76e-183	trmD	2.1.1.228	-	J	ko:K00554	-	ko00000,ko01000,ko03016	Belongs to the RNA methyltransferase TrmD family
PMJDBAPL_00761	3.61e-117	rimM	-	-	J	ko:K02860	-	ko00000,ko03009	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
PMJDBAPL_00762	4.38e-52	ylqC	-	-	S	ko:K06960	-	ko00000	Belongs to the UPF0109 family
PMJDBAPL_00763	1.21e-58	rpsP	-	-	J	ko:K02959	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Belongs to the bacterial ribosomal protein bS16 family
PMJDBAPL_00764	0.0	ffh	3.6.5.4	-	U	ko:K03106	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko01000,ko02044	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
PMJDBAPL_00765	4.23e-76	ylxM	-	-	S	ko:K09787	-	ko00000	Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
PMJDBAPL_00766	7.74e-281	ftsY	-	-	U	ko:K03110	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
PMJDBAPL_00767	0.0	smc	-	-	D	ko:K03529	-	ko00000,ko03036	Required for chromosome condensation and partitioning
PMJDBAPL_00768	1.57e-168	rnc	3.1.26.3	-	J	ko:K03685	ko03008,ko05205,map03008,map05205	ko00000,ko00001,ko01000,ko03009,ko03019,ko03036	Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
PMJDBAPL_00769	1.81e-50	acpP	-	-	IQ	ko:K02078	-	ko00000,ko00001	Carrier of the growing fatty acid chain in fatty acid biosynthesis
PMJDBAPL_00770	1.24e-236	plsX	2.3.1.15	-	I	ko:K03621	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
PMJDBAPL_00771	0.0	recG	3.6.4.12	-	L	ko:K03655	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
PMJDBAPL_00772	0.0	yloV	-	-	S	ko:K07030	-	ko00000	DAK2 domain fusion protein YloV
PMJDBAPL_00773	1.05e-77	yloU	-	-	S	-	-	-	Asp23 family, cell envelope-related function
PMJDBAPL_00774	1.1e-34	rpmB	-	-	J	ko:K02902	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL28 family
PMJDBAPL_00775	3.31e-157	thiN	2.7.6.2	-	H	ko:K00949	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000	thiamine pyrophosphokinase
PMJDBAPL_00776	4.49e-151	rpe	5.1.3.1	-	G	ko:K01783	ko00030,ko00040,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the ribulose-phosphate 3-epimerase family
PMJDBAPL_00777	1.03e-209	rsgA	3.1.3.100	-	S	ko:K06949	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000,ko03009	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
PMJDBAPL_00778	0.0	prkC	2.7.11.1	-	KLT	ko:K08884,ko:K12132	-	ko00000,ko01000,ko01001	serine threonine protein kinase
PMJDBAPL_00779	1e-166	stp	3.1.3.16	-	T	ko:K20074	-	ko00000,ko01000,ko01009	phosphatase
PMJDBAPL_00780	6.63e-313	sun	2.1.1.176	-	J	ko:K03500	-	ko00000,ko01000,ko03009	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
PMJDBAPL_00781	2.76e-220	fmt	2.1.2.9	-	J	ko:K00604	ko00670,ko00970,map00670,map00970	ko00000,ko00001,ko01000	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
PMJDBAPL_00782	0.0	priA	-	-	L	ko:K04066	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
PMJDBAPL_00783	7.85e-267	coaBC	4.1.1.36, 6.3.2.5	-	H	ko:K01598,ko:K13038	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
PMJDBAPL_00784	6.66e-43	rpoZ	2.7.7.6	-	K	ko:K03060	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
PMJDBAPL_00785	4.37e-148	gmk	2.7.4.8	-	F	ko:K00942	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko00002,ko01000	Essential for recycling GMP and indirectly, cGMP
PMJDBAPL_00786	9e-72	-	-	-	-	-	-	-	-
PMJDBAPL_00787	0.0	recN	-	-	L	ko:K03631	-	ko00000,ko03400	May be involved in recombinational repair of damaged DNA
PMJDBAPL_00788	1.52e-98	argR2	-	-	K	ko:K03402	-	ko00000,ko03000	Regulates arginine biosynthesis genes
PMJDBAPL_00789	1.56e-188	rrmJ	2.1.1.226, 2.1.1.227	-	J	ko:K06442	-	ko00000,ko01000,ko03009	Ribosomal RNA large subunit methyltransferase J
PMJDBAPL_00790	1.76e-198	ispA	2.5.1.1, 2.5.1.10, 2.5.1.29	-	H	ko:K13789	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko01006	Belongs to the FPP GGPP synthase family
PMJDBAPL_00791	2.83e-58	xseB	3.1.11.6	-	L	ko:K03602	ko03430,map03430	ko00000,ko00001,ko01000,ko03400	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PMJDBAPL_00792	5.19e-308	xseA	3.1.11.6	-	L	ko:K03601	ko03430,map03430	ko00000,ko00001,ko01000,ko03400	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PMJDBAPL_00793	3.25e-192	folD	1.5.1.5, 3.5.4.9	-	F	ko:K01491	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
PMJDBAPL_00794	2.24e-92	nusB	-	-	K	ko:K03625	-	ko00000,ko03009,ko03021	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
PMJDBAPL_00795	2.66e-92	WQ51_04310	-	-	S	ko:K10947	-	ko00000,ko03000	Asp23 family, cell envelope-related function
PMJDBAPL_00796	1.86e-142	-	-	-	J	-	-	-	2'-5' RNA ligase superfamily
PMJDBAPL_00797	9.71e-253	pepP	3.4.11.9, 3.4.13.9	-	E	ko:K01262,ko:K01271	-	ko00000,ko01000,ko01002	Creatinase/Prolidase N-terminal domain
PMJDBAPL_00798	7.14e-166	-	-	-	S	ko:K06997	-	ko00000	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
PMJDBAPL_00799	7.2e-61	rpmA	-	-	J	ko:K02899	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL27 family
PMJDBAPL_00800	1.77e-72	ysxB	-	-	J	ko:K07584	-	ko00000	Cysteine protease Prp
PMJDBAPL_00801	3.81e-67	rplU	-	-	J	ko:K02888	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein binds to 23S rRNA in the presence of protein L20
PMJDBAPL_00802	5.7e-146	-	-	-	K	-	-	-	Transcriptional regulator
PMJDBAPL_00805	1.58e-111	-	-	-	S	-	-	-	Protein conserved in bacteria
PMJDBAPL_00806	6.65e-236	-	-	-	-	-	-	-	-
PMJDBAPL_00807	4.87e-203	-	-	-	-	-	-	-	-
PMJDBAPL_00808	4.41e-67	yitW	-	-	S	-	-	-	Iron-sulfur cluster assembly protein
PMJDBAPL_00809	5.71e-131	msrA	1.8.4.11	-	C	ko:K07304	-	ko00000,ko01000	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PMJDBAPL_00810	8.4e-198	-	-	-	P	ko:K02073	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the nlpA lipoprotein family
PMJDBAPL_00811	1.28e-18	-	-	-	-	-	-	-	-
PMJDBAPL_00812	4.89e-282	araT	2.6.1.57	-	E	ko:K00832,ko:K00841	ko00270,ko00300,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01230,map00270,map00300,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase
PMJDBAPL_00813	0.0	gltX	6.1.1.24	-	J	ko:K09698	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
PMJDBAPL_00814	0.0	glnA	6.3.1.2	-	E	ko:K01915	ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727	ko00000,ko00001,ko01000,ko04147	glutamine synthetase
PMJDBAPL_00815	3.96e-224	miaA	2.5.1.75	-	F	ko:K00791	ko00908,ko01100,ko01110,map00908,map01100,map01110	ko00000,ko00001,ko01000,ko01006,ko03016	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
PMJDBAPL_00816	1.18e-30	-	-	-	S	-	-	-	Protein of unknown function (DUF3042)
PMJDBAPL_00817	7.36e-86	yqhL	-	-	P	-	-	-	Rhodanese-like protein
PMJDBAPL_00818	2.93e-234	glcK	2.7.1.2	-	G	ko:K00845	ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Glucokinase
PMJDBAPL_00819	7.07e-48	yqgQ	-	-	S	-	-	-	Bacterial protein of unknown function (DUF910)
PMJDBAPL_00820	2.39e-147	gluP	3.4.21.105	-	S	ko:K19225	-	ko00000,ko01000,ko01002	Peptidase, S54 family
PMJDBAPL_00821	1.28e-127	fthC	6.3.3.2	-	H	ko:K01934	ko00670,ko01100,map00670,map01100	ko00000,ko00001,ko01000	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
PMJDBAPL_00822	1.53e-29	rpmG	-	-	J	ko:K02913	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL33 family
PMJDBAPL_00823	0.0	pbp2b	-	-	M	ko:K00687,ko:K12553,ko:K21465,ko:K21466	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01011	Penicillin-binding Protein
PMJDBAPL_00824	0.0	-	-	-	S	-	-	-	membrane
PMJDBAPL_00825	1.33e-91	yneR	-	-	S	-	-	-	Belongs to the HesB IscA family
PMJDBAPL_00826	6.08e-102	greA	-	-	K	ko:K03624	-	ko00000,ko03021	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PMJDBAPL_00827	2.06e-152	udk	2.7.1.48	-	F	ko:K00876	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	Cytidine monophosphokinase
PMJDBAPL_00828	4e-147	-	-	-	M	-	-	-	PFAM NLP P60 protein
PMJDBAPL_00829	0.0	pheT	6.1.1.20	-	J	ko:K01890	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PMJDBAPL_00830	4.27e-251	pheS	6.1.1.20	-	J	ko:K01889	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
PMJDBAPL_00831	1.66e-77	yodB	-	-	K	-	-	-	Transcriptional regulator, HxlR family
PMJDBAPL_00832	3.75e-119	XK27_09705	-	-	S	ko:K06950	-	ko00000	Metal dependent phosphohydrolases with conserved 'HD' motif.
PMJDBAPL_00833	4.49e-185	spoU	-	-	J	ko:K03437	-	ko00000,ko03016	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PMJDBAPL_00834	2.45e-58	acyP	3.6.1.7	-	C	ko:K01512	ko00620,ko00627,ko01120,map00620,map00627,map01120	ko00000,ko00001,ko01000	Belongs to the acylphosphatase family
PMJDBAPL_00835	1.16e-216	yidC	-	-	U	ko:K03217	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044,ko03029	Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PMJDBAPL_00836	1.35e-92	def2	3.5.1.88	-	J	ko:K01462	-	ko00000,ko01000	Removes the formyl group from the N-terminal Met of newly synthesized proteins
PMJDBAPL_00837	4.27e-292	-	-	-	V	-	-	-	MatE
PMJDBAPL_00838	0.0	potE	-	-	E	-	-	-	Amino Acid
PMJDBAPL_00839	0.0	arlS	2.7.13.3	-	T	ko:K18940	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
PMJDBAPL_00840	9.72e-156	csrR	-	-	K	-	-	-	response regulator
PMJDBAPL_00841	7.21e-39	rpmF	-	-	J	ko:K02911	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Belongs to the bacterial ribosomal protein bL32 family
PMJDBAPL_00842	2.38e-128	ylbN	-	-	S	ko:K07040	-	ko00000	Uncharacterized ACR, COG1399
PMJDBAPL_00843	3.95e-273	ylbM	-	-	S	-	-	-	Belongs to the UPF0348 family
PMJDBAPL_00844	5.25e-178	yqeM	-	-	Q	-	-	-	Methyltransferase
PMJDBAPL_00845	2.69e-79	rsfS	-	-	J	ko:K09710	-	ko00000,ko03009	Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
PMJDBAPL_00846	4.2e-145	yqeK	-	-	H	-	-	-	Hydrolase, HD family
PMJDBAPL_00847	1.03e-159	nadD	2.7.7.18	-	H	ko:K00969	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
PMJDBAPL_00848	5.4e-63	yhbY	-	-	J	ko:K07574	-	ko00000,ko03009	RNA-binding protein
PMJDBAPL_00849	4.47e-278	yqeH	-	-	S	ko:K06948	-	ko00000,ko03009	Ribosome biogenesis GTPase YqeH
PMJDBAPL_00850	2.71e-125	yqeG	-	-	S	ko:K07015	-	ko00000	HAD phosphatase, family IIIA
PMJDBAPL_00851	5.46e-74	rplT	-	-	J	ko:K02887	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
PMJDBAPL_00852	1.82e-37	rpmI	-	-	J	ko:K02916	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL35 family
PMJDBAPL_00853	1.07e-110	infC	-	-	J	ko:K02520	-	ko00000,ko03012,ko03029	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
PMJDBAPL_00854	2.11e-222	dnaI	-	-	L	ko:K11144	-	ko00000,ko03032	Primosomal protein DnaI
PMJDBAPL_00855	2.08e-302	dnaB	-	-	L	ko:K03346	-	ko00000,ko03032	replication initiation and membrane attachment
PMJDBAPL_00856	2.82e-105	nrdR	-	-	K	ko:K07738	-	ko00000,ko03000	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
PMJDBAPL_00857	1.39e-127	coaE	2.7.1.24	-	F	ko:K00859	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
PMJDBAPL_00858	8.44e-199	fpg	3.2.2.23, 4.2.99.18	-	L	ko:K10563	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
PMJDBAPL_00859	0.0	polA	2.7.7.7	-	L	ko:K02335	ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440	ko00000,ko00001,ko01000,ko03032,ko03400	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
PMJDBAPL_00860	1.44e-155	-	-	-	S	-	-	-	Protein of unknown function (DUF1275)
PMJDBAPL_00861	3.74e-153	ybhL	-	-	S	ko:K06890	-	ko00000	Belongs to the BI1 family
PMJDBAPL_00862	0.0	murC	6.3.2.8	-	M	ko:K01924	ko00471,ko00550,ko01100,map00471,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Belongs to the MurCDEF family
PMJDBAPL_00863	1.63e-152	ytpR	-	-	J	ko:K06878	-	ko00000	Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PMJDBAPL_00864	2.95e-75	ytpP	-	-	CO	-	-	-	Thioredoxin
PMJDBAPL_00865	3.23e-75	-	-	-	S	-	-	-	Small secreted protein
PMJDBAPL_00866	5.13e-215	glsA	3.5.1.2	-	E	ko:K01425	ko00220,ko00250,ko00471,ko01100,ko04724,ko04727,ko04964,ko05206,ko05230,map00220,map00250,map00471,map01100,map04724,map04727,map04964,map05206,map05230	ko00000,ko00001,ko01000	Belongs to the glutaminase family
PMJDBAPL_00867	8.5e-100	-	-	-	L	ko:K07491	-	ko00000	Transposase IS200 like
PMJDBAPL_00868	6.05e-290	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
PMJDBAPL_00872	1.59e-05	-	-	-	-	-	-	-	-
PMJDBAPL_00874	4.34e-92	-	-	-	L	-	-	-	HNH nucleases
PMJDBAPL_00875	2.48e-84	-	-	-	L	-	-	-	Phage terminase, small subunit
PMJDBAPL_00876	0.0	terL	-	-	S	-	-	-	overlaps another CDS with the same product name
PMJDBAPL_00878	1.85e-252	-	-	-	S	-	-	-	Phage portal protein
PMJDBAPL_00879	7.03e-161	-	3.4.21.92	-	OU	ko:K01358	ko04112,ko04212,map04112,map04212	ko00000,ko00001,ko01000,ko01002	Belongs to the peptidase S14 family
PMJDBAPL_00881	7.78e-66	-	-	-	S	-	-	-	Phage gp6-like head-tail connector protein
PMJDBAPL_00883	1e-41	-	-	-	S	-	-	-	Bacteriophage HK97-gp10, putative tail-component
PMJDBAPL_00885	2.44e-101	-	-	-	S	-	-	-	Phage tail tube protein
PMJDBAPL_00886	5.82e-13	-	-	-	S	-	-	-	Phage tail assembly chaperone proteins, TAC
PMJDBAPL_00887	0.0	-	-	-	L	-	-	-	Phage tail tape measure protein TP901
PMJDBAPL_00888	6.87e-105	-	-	-	S	-	-	-	Phage tail protein
PMJDBAPL_00889	3.61e-173	-	-	-	M	-	-	-	Prophage endopeptidase tail
PMJDBAPL_00890	8.64e-51	-	-	-	LM	-	-	-	gp58-like protein
PMJDBAPL_00897	2.86e-44	-	-	-	S	-	-	-	Bacteriophage holin of superfamily 6 (Holin_LLH)
PMJDBAPL_00898	5.44e-188	lysA2	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
PMJDBAPL_00900	1.11e-41	-	-	-	S	-	-	-	Protein of unknown function (DUF2929)
PMJDBAPL_00901	0.0	dnaE	2.7.7.7	-	L	ko:K02337	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase
PMJDBAPL_00902	0.0	pyk	2.7.1.40	-	G	ko:K00873	ko00010,ko00230,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko04930,ko05165,ko05203,ko05230,map00010,map00230,map00620,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map04930,map05165,map05203,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Belongs to the pyruvate kinase family
PMJDBAPL_00903	6.25e-214	yitL	-	-	S	ko:K00243	-	ko00000	S1 domain
PMJDBAPL_00904	2.35e-211	xerD	-	-	D	ko:K04763	-	ko00000,ko03036	recombinase XerD
PMJDBAPL_00905	2.49e-84	ribT	-	-	K	ko:K02859	-	ko00000	COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PMJDBAPL_00906	1.31e-175	scpA	-	-	D	ko:K05896	-	ko00000,ko03036	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
PMJDBAPL_00907	4.16e-132	scpB	-	-	D	ko:K06024	-	ko00000,ko03036	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
PMJDBAPL_00908	1.05e-164	rluB	5.4.99.22	-	J	ko:K06178	-	ko00000,ko01000,ko03009	Belongs to the pseudouridine synthase RsuA family
PMJDBAPL_00909	8.88e-132	ribU	-	-	U	-	-	-	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
PMJDBAPL_00910	2.84e-241	-	-	-	S	-	-	-	Helix-turn-helix domain
PMJDBAPL_00911	0.0	recQ	3.6.4.12	-	L	ko:K03654	ko03018,map03018	ko00000,ko00001,ko01000,ko03400	ATP-dependent DNA helicase RecQ
PMJDBAPL_00912	1.44e-81	-	-	-	M	-	-	-	Lysin motif
PMJDBAPL_00913	1.55e-152	cmk	2.7.4.25	-	F	ko:K00945	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the cytidylate kinase family. Type 1 subfamily
PMJDBAPL_00914	1.49e-274	rpsA	-	-	J	ko:K02945	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein S1
PMJDBAPL_00915	9.51e-317	der	-	-	S	ko:K03977	-	ko00000,ko03009	GTPase that plays an essential role in the late steps of ribosome biogenesis
PMJDBAPL_00916	1.6e-54	hup	-	-	L	ko:K03530	-	ko00000,ko03032,ko03036,ko03400	Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
PMJDBAPL_00917	9.5e-301	XK27_05225	-	-	S	-	-	-	Tetratricopeptide repeat protein
PMJDBAPL_00918	5.15e-289	cca	2.7.7.72	-	J	ko:K00974	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
PMJDBAPL_00919	0.0	yfmR	-	-	S	ko:K15738	-	ko00000,ko02000	ABC transporter, ATP-binding protein
PMJDBAPL_00920	5.13e-247	thyA	2.1.1.45	-	F	ko:K00560	ko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523	ko00000,ko00001,ko00002,ko01000	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
PMJDBAPL_00921	4.1e-120	folA	1.5.1.3	-	H	ko:K00287	ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523	ko00000,ko00001,ko00002,ko01000	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
PMJDBAPL_00922	2.59e-144	hlyIII	-	-	S	ko:K11068	-	ko00000,ko02042	protein, hemolysin III
PMJDBAPL_00923	1.1e-196	WQ51_01275	-	-	S	-	-	-	EDD domain protein, DegV family
PMJDBAPL_00924	1.54e-217	-	-	-	E	-	-	-	lipolytic protein G-D-S-L family
PMJDBAPL_00925	2.74e-139	ypmS	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2140)
PMJDBAPL_00926	1.33e-47	yozE	-	-	S	-	-	-	Belongs to the UPF0346 family
PMJDBAPL_00927	4.19e-206	rbgA	-	-	S	ko:K14540	-	ko00000,ko03009	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
PMJDBAPL_00928	5.87e-180	rnhB	3.1.26.4	-	L	ko:K03470	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PMJDBAPL_00929	2.93e-202	dprA	-	-	LU	ko:K04096	-	ko00000	DNA protecting protein DprA
PMJDBAPL_00930	0.0	topA	5.99.1.2	-	L	ko:K03168	-	ko00000,ko01000,ko03032,ko03400	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
PMJDBAPL_00931	1.42e-214	lacX	5.1.3.3	-	G	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Aldose 1-epimerase
PMJDBAPL_00932	2.29e-137	plsY	2.3.1.15	-	I	ko:K08591	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
PMJDBAPL_00933	0.0	parE	-	-	L	ko:K02622	-	ko00000,ko01000,ko02048,ko03032,ko03036	Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PMJDBAPL_00934	0.0	parC	-	-	L	ko:K02621	-	ko00000,ko01000,ko02048,ko03032,ko03036	Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PMJDBAPL_00935	2.32e-109	-	-	-	F	-	-	-	NUDIX domain
PMJDBAPL_00936	1.27e-222	ppaC	3.6.1.1	-	C	ko:K15986	ko00190,map00190	ko00000,ko00001,ko01000	inorganic pyrophosphatase
PMJDBAPL_00937	3.67e-89	-	-	-	S	-	-	-	Belongs to the HesB IscA family
PMJDBAPL_00938	5.5e-67	-	-	-	-	-	-	-	-
PMJDBAPL_00940	3.93e-119	ywnH	2.3.1.183	-	M	ko:K03823	ko00440,ko01130,map00440,map01130	ko00000,ko00001,ko01000	Acetyltransferase (GNAT) domain
PMJDBAPL_00941	1.83e-79	asp1	-	-	S	-	-	-	Asp23 family, cell envelope-related function
PMJDBAPL_00942	3.09e-35	-	-	-	-	-	-	-	-
PMJDBAPL_00943	1.89e-123	-	-	-	-	-	-	-	-
PMJDBAPL_00944	0.0	gntK	2.7.1.12	-	G	ko:K00851	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko01000	Belongs to the FGGY kinase family
PMJDBAPL_00945	2.04e-234	-	-	-	K	ko:K02525	-	ko00000,ko03000	Transcriptional regulator, LacI family
PMJDBAPL_00946	2.81e-297	gntP	-	-	EG	ko:K03299	-	ko00000,ko02000	Gluconate
PMJDBAPL_00947	0.0	gntK	2.7.1.12	-	G	ko:K00851	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko01000	Belongs to the FGGY kinase family
PMJDBAPL_00948	3.42e-124	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
PMJDBAPL_00949	7.67e-63	-	-	-	-	-	-	-	-
PMJDBAPL_00950	1.05e-40	-	-	-	-	-	-	-	-
PMJDBAPL_00951	1.26e-60	-	-	-	-	-	-	-	-
PMJDBAPL_00952	4.03e-98	-	-	-	S	-	-	-	Protein of unknown function (DUF805)
PMJDBAPL_00953	1.77e-70	-	-	-	S	-	-	-	Uncharacterised protein family (UPF0236)
PMJDBAPL_00954	0.0	menF	5.4.4.2	-	HQ	ko:K02552	ko00130,ko01053,ko01100,ko01110,ko01130,map00130,map01053,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	chorismate binding enzyme
PMJDBAPL_00955	0.0	menD	2.2.1.9	-	H	ko:K02551	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
PMJDBAPL_00956	3.58e-197	menH	4.2.99.20	-	I	ko:K08680	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes a proton abstraction reaction that results in 2,5-elimination of pyruvate from 2-succinyl-5-enolpyruvyl-6- hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC) and the formation of 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate (SHCHC)
PMJDBAPL_00957	7.73e-260	-	-	-	G	-	-	-	Major Facilitator Superfamily
PMJDBAPL_00958	2.51e-261	aroC	4.2.3.5	-	E	ko:K01736	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
PMJDBAPL_00959	1.02e-294	aroA	2.5.1.19	-	E	ko:K00800	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
PMJDBAPL_00960	6.78e-104	aroK	2.7.1.71	-	F	ko:K00891	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
PMJDBAPL_00961	2.73e-94	menC	4.2.1.113	-	H	ko:K02549	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB)
PMJDBAPL_00962	8.28e-137	yocS	-	-	S	ko:K03453	-	ko00000	SBF-like CPA transporter family (DUF4137)
PMJDBAPL_00963	2.05e-164	isp	-	-	L	-	-	-	Transposase
PMJDBAPL_00964	3.04e-65	-	-	-	L	-	-	-	Bacterial dnaA protein
PMJDBAPL_00965	6.05e-290	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
PMJDBAPL_00966	8.5e-100	-	-	-	L	ko:K07491	-	ko00000	Transposase IS200 like
PMJDBAPL_00967	1.04e-20	-	-	-	S	-	-	-	Membrane
PMJDBAPL_00969	1.29e-56	-	-	-	-	-	-	-	-
PMJDBAPL_00970	1.24e-24	-	-	-	-	-	-	-	-
PMJDBAPL_00971	2.35e-92	-	-	-	S	-	-	-	IrrE N-terminal-like domain
PMJDBAPL_00972	7.96e-35	-	-	-	K	-	-	-	Helix-turn-helix domain
PMJDBAPL_00975	2.29e-82	-	-	-	S	-	-	-	DNA binding
PMJDBAPL_00982	4.52e-26	-	-	-	-	-	-	-	-
PMJDBAPL_00984	1.85e-05	-	-	-	K	-	-	-	XRE family transcriptional regulator
PMJDBAPL_00986	4.28e-81	-	-	-	S	-	-	-	Bacteriophage Mu Gam like protein
PMJDBAPL_00987	5.6e-33	-	-	-	S	-	-	-	Protein of unknown function (DUF1071)
PMJDBAPL_00988	5.56e-91	-	-	-	S	-	-	-	Putative HNHc nuclease
PMJDBAPL_00989	1.99e-28	ssb	-	-	L	ko:K03111	ko03030,ko03430,ko03440,map03030,map03430,map03440	ko00000,ko00001,ko03029,ko03032,ko03400	Single-stranded DNA-binding protein
PMJDBAPL_00990	1.55e-71	-	-	-	L	-	-	-	DnaD domain protein
PMJDBAPL_00991	9.8e-50	-	-	-	L	ko:K02315	-	ko00000,ko03032	IstB-like ATP binding protein
PMJDBAPL_00995	2.76e-247	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
PMJDBAPL_00996	2.41e-157	-	-	-	V	-	-	-	site-specific DNA-methyltransferase (adenine-specific) activity
PMJDBAPL_00998	7.24e-39	-	-	-	-	-	-	-	-
PMJDBAPL_01000	8.22e-105	-	-	-	Q	-	-	-	DNA (cytosine-5-)-methyltransferase activity
PMJDBAPL_01002	7.39e-30	rusA	-	-	L	-	-	-	Endodeoxyribonuclease RusA
PMJDBAPL_01007	7.36e-10	-	-	-	-	-	-	-	-
PMJDBAPL_01008	1.52e-102	xtmA	-	-	L	ko:K07474	-	ko00000	Terminase small subunit
PMJDBAPL_01009	2.57e-275	-	-	-	S	-	-	-	Terminase-like family
PMJDBAPL_01010	4.65e-271	-	-	-	S	-	-	-	Phage portal protein, SPP1 Gp6-like
PMJDBAPL_01011	1.61e-193	-	-	-	S	-	-	-	Phage Mu protein F like protein
PMJDBAPL_01012	6.11e-81	-	-	-	S	-	-	-	Domain of unknown function (DUF4355)
PMJDBAPL_01013	1.73e-72	-	-	-	-	-	-	-	-
PMJDBAPL_01014	1.42e-213	-	-	-	S	-	-	-	Phage major capsid protein E
PMJDBAPL_01015	2.82e-47	-	-	-	-	-	-	-	-
PMJDBAPL_01016	1.9e-74	-	-	-	-	-	-	-	-
PMJDBAPL_01017	1.1e-102	-	-	-	-	-	-	-	-
PMJDBAPL_01018	6.24e-71	-	-	-	-	-	-	-	-
PMJDBAPL_01019	1.87e-93	-	-	-	S	-	-	-	Phage tail tube protein, TTP
PMJDBAPL_01020	8.06e-76	-	-	-	-	-	-	-	-
PMJDBAPL_01021	4.34e-42	-	-	-	-	-	-	-	-
PMJDBAPL_01022	0.0	-	-	-	L	-	-	-	Phage tail tape measure protein TP901
PMJDBAPL_01023	1.1e-69	-	-	-	-	-	-	-	-
PMJDBAPL_01024	6.05e-290	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
PMJDBAPL_01025	8.5e-100	-	-	-	L	ko:K07491	-	ko00000	Transposase IS200 like
PMJDBAPL_01028	2.64e-80	rusA	-	-	L	-	-	-	Endodeoxyribonuclease RusA
PMJDBAPL_01031	1.84e-41	-	-	-	V	-	-	-	NUMOD4 motif
PMJDBAPL_01033	4.95e-104	-	-	-	Q	-	-	-	DNA (cytosine-5-)-methyltransferase activity
PMJDBAPL_01034	3.19e-30	-	-	-	-	-	-	-	-
PMJDBAPL_01036	1.02e-75	-	-	-	S	-	-	-	VRR_NUC
PMJDBAPL_01038	6.84e-152	-	-	-	S	ko:K06919	-	ko00000	Virulence-associated protein E
PMJDBAPL_01039	5.42e-106	-	-	-	S	-	-	-	Bifunctional DNA primase/polymerase, N-terminal
PMJDBAPL_01040	7.5e-43	-	-	-	-	-	-	-	-
PMJDBAPL_01041	2.11e-111	-	-	-	L	-	-	-	AAA domain
PMJDBAPL_01043	1.01e-197	-	-	-	L	-	-	-	Helicase C-terminal domain protein
PMJDBAPL_01044	3.83e-33	-	-	-	S	-	-	-	Siphovirus Gp157
PMJDBAPL_01050	8.84e-33	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
PMJDBAPL_01051	1.18e-84	-	-	-	K	-	-	-	Cro/C1-type HTH DNA-binding domain
PMJDBAPL_01052	8.85e-97	-	-	-	E	-	-	-	IrrE N-terminal-like domain
PMJDBAPL_01054	1.2e-26	-	-	-	-	-	-	-	-
PMJDBAPL_01056	8e-17	-	-	-	-	-	-	-	-
PMJDBAPL_01057	1.46e-116	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
PMJDBAPL_01058	5.74e-304	pepT	3.4.11.4	-	E	ko:K01258	-	ko00000,ko01000,ko01002	Cleaves the N-terminal amino acid of tripeptides
PMJDBAPL_01059	1.2e-197	yqfO	-	-	S	-	-	-	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
PMJDBAPL_01060	2.68e-161	trmK	2.1.1.217	-	S	ko:K06967	-	ko00000,ko01000,ko03016	SAM-dependent methyltransferase
PMJDBAPL_01061	5.91e-279	aspC	-	-	E	ko:K00841	ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase
PMJDBAPL_01062	5.12e-266	sigA	-	-	K	ko:K03086	-	ko00000,ko03021	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
PMJDBAPL_01063	0.0	dnaG	-	-	L	ko:K02316	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
PMJDBAPL_01064	0.0	glyS	6.1.1.14	-	J	ko:K01879	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Glycyl-tRNA synthetase beta subunit
PMJDBAPL_01065	2.14e-234	glyQ	6.1.1.14	-	J	ko:K01878	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	glycyl-tRNA synthetase alpha subunit
PMJDBAPL_01066	4.85e-186	recO	-	-	L	ko:K03584	ko03440,map03440	ko00000,ko00001,ko03400	Involved in DNA repair and RecF pathway recombination
PMJDBAPL_01067	4.06e-214	era	-	-	S	ko:K03595	-	ko00000,ko03009,ko03029	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
PMJDBAPL_01068	1.43e-78	dgkA	2.7.1.107, 2.7.1.66	-	M	ko:K00887,ko:K00901	ko00550,ko00561,ko00564,ko01100,ko01110,ko04070,ko04072,ko05231,map00550,map00561,map00564,map01100,map01110,map04070,map04072,map05231	ko00000,ko00001,ko01000	Diacylglycerol kinase
PMJDBAPL_01069	7.1e-106	ybeY	-	-	S	ko:K07042	-	ko00000,ko03009	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
PMJDBAPL_01070	2.49e-232	phoH	-	-	T	ko:K06217	-	ko00000	phosphate starvation-inducible protein PhoH
PMJDBAPL_01071	2e-216	birA	6.3.4.15	-	H	ko:K03524	ko00780,ko01100,map00780,map01100	ko00000,ko00001,ko01000,ko03000	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
PMJDBAPL_01072	1.87e-107	bioY	-	-	S	ko:K03523	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	BioY family
PMJDBAPL_01073	0.0	argH	4.3.2.1	-	E	ko:K01755	ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,map00220,map00250,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	argininosuccinate lyase
PMJDBAPL_01074	3.59e-304	argG	6.3.4.5	-	E	ko:K01940	ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,ko05418,map00220,map00250,map01100,map01110,map01130,map01230,map05418	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the argininosuccinate synthase family. Type 1 subfamily
PMJDBAPL_01075	6.44e-239	cbh	3.5.1.24	-	M	ko:K01442	ko00120,ko00121,ko01100,map00120,map00121,map01100	ko00000,ko00001,ko01000	Linear amide C-N hydrolase, choloylglycine hydrolase family protein
PMJDBAPL_01076	2.34e-92	yqeY	-	-	S	ko:K09117	-	ko00000	YqeY-like protein
PMJDBAPL_01077	1e-31	rpsU	-	-	J	ko:K02970	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bS21 family
PMJDBAPL_01078	0.0	glnPH2	-	-	P	ko:K02029,ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter permease
PMJDBAPL_01079	1.49e-168	glnQ	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
PMJDBAPL_01080	0.0	aspS	6.1.1.12	-	J	ko:K01876	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
PMJDBAPL_01081	3.1e-213	-	-	-	G	-	-	-	Phosphotransferase enzyme family
PMJDBAPL_01082	3.15e-256	galM	5.1.3.3	-	G	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the interconversion of alpha and beta anomers of maltose
PMJDBAPL_01083	1.95e-37	-	-	-	-	-	-	-	-
PMJDBAPL_01086	0.0	-	-	-	S	ko:K13730	ko05100,map05100	ko00000,ko00001	Uncharacterized protein conserved in bacteria (DUF2252)
PMJDBAPL_01087	0.0	-	-	-	L	-	-	-	PFAM plasmid pRiA4b ORF-3 family protein
PMJDBAPL_01088	1.15e-264	adh	1.1.1.1	-	C	ko:K13953	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	Zinc-binding alcohol dehydrogenase family protein
PMJDBAPL_01089	4.07e-144	ppiB	5.2.1.8	-	G	ko:K03768	-	ko00000,ko01000,ko03110	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
PMJDBAPL_01090	2.08e-210	mleR	-	-	K	-	-	-	LysR family
PMJDBAPL_01091	0.0	mleS	1.1.1.38, 4.1.1.101	-	C	ko:K00027,ko:K22212	ko00620,ko01120,ko01200,ko02020,map00620,map01120,map01200,map02020	ko00000,ko00001,ko01000	Malic enzyme
PMJDBAPL_01092	0.0	fumC	4.2.1.2	-	C	ko:K01679	ko00020,ko00620,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko04934,ko05200,ko05211,map00020,map00620,map00720,map01100,map01110,map01120,map01130,map01200,map04934,map05200,map05211	ko00000,ko00001,ko00002,ko01000	Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
PMJDBAPL_01093	0.0	frdA	1.3.5.4	-	C	ko:K00244	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	ko00000,ko00001,ko00002,ko01000	FAD binding domain
PMJDBAPL_01094	0.0	citP	-	-	P	ko:K03319	-	ko00000	Sodium:sulfate symporter transmembrane region
PMJDBAPL_01095	2.31e-201	-	-	-	K	-	-	-	LysR family
PMJDBAPL_01096	0.0	-	-	-	S	-	-	-	Putative threonine/serine exporter
PMJDBAPL_01097	1.91e-152	-	3.2.2.27	-	L	ko:K21929	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Uracil-DNA glycosylase
PMJDBAPL_01098	0.0	qacA	-	-	EGP	-	-	-	Major Facilitator
PMJDBAPL_01099	1.7e-235	-	-	-	I	-	-	-	Alpha beta
PMJDBAPL_01100	2.28e-133	-	3.5.1.124	-	S	ko:K03152	-	ko00000,ko01000,ko01002	DJ-1/PfpI family
PMJDBAPL_01101	0.0	mprF	2.3.2.3	-	S	ko:K14205	ko01503,ko02020,ko05150,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01000,ko01504	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
PMJDBAPL_01103	1.86e-209	yjbO	5.4.99.23	-	J	ko:K06180	-	ko00000,ko01000,ko03009	Responsible for synthesis of pseudouridine from uracil
PMJDBAPL_01104	3.46e-156	-	-	-	S	-	-	-	Domain of unknown function (DUF4811)
PMJDBAPL_01105	0.0	ycnB	-	-	U	-	-	-	Belongs to the major facilitator superfamily
PMJDBAPL_01106	3.21e-99	-	-	-	K	-	-	-	MerR HTH family regulatory protein
PMJDBAPL_01107	1.92e-73	-	-	-	-	-	-	-	-
PMJDBAPL_01108	0.0	rnjA	-	-	J	ko:K12574	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PMJDBAPL_01109	3.54e-276	-	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
PMJDBAPL_01110	1.04e-140	glnP	-	-	P	ko:K10040	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
PMJDBAPL_01111	3.03e-142	glnM	-	-	P	ko:K10040	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
PMJDBAPL_01112	1.91e-195	peb1A	-	-	ET	ko:K10039	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
PMJDBAPL_01113	1.97e-173	glnQ	-	-	E	ko:K10041	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
PMJDBAPL_01114	4.83e-108	-	-	-	T	-	-	-	Belongs to the universal stress protein A family
PMJDBAPL_01115	2.72e-141	-	-	-	S	-	-	-	VIT family
PMJDBAPL_01116	7.33e-152	-	-	-	S	-	-	-	membrane
PMJDBAPL_01117	1.65e-211	-	-	-	P	ko:K16264	-	ko00000,ko02000	cation diffusion facilitator family transporter
PMJDBAPL_01118	4.1e-156	mntR	-	-	K	ko:K03709	-	ko00000,ko03000	iron dependent repressor
PMJDBAPL_01119	8.84e-43	cspC	-	-	K	ko:K03704	-	ko00000,ko03000	Cold shock protein
PMJDBAPL_01120	1.26e-167	-	-	-	S	-	-	-	Putative threonine/serine exporter
PMJDBAPL_01121	1.06e-106	-	-	-	S	-	-	-	Threonine/Serine exporter, ThrE
PMJDBAPL_01122	2.79e-153	-	-	-	I	-	-	-	phosphatase
PMJDBAPL_01124	0.0	lysP	-	-	E	ko:K03293,ko:K11733	-	ko00000,ko02000	amino acid
PMJDBAPL_01125	7.78e-150	dgk2	-	-	F	-	-	-	deoxynucleoside kinase
PMJDBAPL_01131	1.03e-53	-	-	-	L	-	-	-	Phage integrase, N-terminal SAM-like domain
PMJDBAPL_01132	2.57e-23	-	-	-	S	-	-	-	sequence-specific DNA binding
PMJDBAPL_01133	2.41e-20	-	-	-	-	-	-	-	-
PMJDBAPL_01134	2.85e-37	-	-	-	-	-	-	-	-
PMJDBAPL_01136	1.8e-59	-	-	-	S	-	-	-	calcium ion binding
PMJDBAPL_01142	1.62e-229	-	-	-	S	ko:K06889	-	ko00000	Hydrolases of the alpha beta superfamily
PMJDBAPL_01143	1.8e-249	adhP	1.1.1.1	-	C	ko:K00001,ko:K13953	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	alcohol dehydrogenase
PMJDBAPL_01144	2.81e-101	ctsR	-	-	K	ko:K03708	-	ko00000,ko03000	Belongs to the CtsR family
PMJDBAPL_01145	0.0	clpC	-	-	O	ko:K03696	ko01100,map01100	ko00000,ko03110	Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
PMJDBAPL_01146	4.22e-143	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PMJDBAPL_01147	0.0	rpoB	2.7.7.6	-	K	ko:K03043	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PMJDBAPL_01148	0.0	rpoC	2.7.7.6	-	K	ko:K03046	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PMJDBAPL_01149	4.12e-257	-	-	-	-	-	-	-	-
PMJDBAPL_01150	1.97e-153	comC	3.4.23.43	-	NOU	ko:K02236,ko:K02654	-	ko00000,ko00002,ko01000,ko01002,ko02035,ko02044	Type II secretory pathway prepilin signal peptidase PulO and related peptidases
PMJDBAPL_01151	2.51e-94	rpsL	-	-	J	ko:K02950	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
PMJDBAPL_01152	2.06e-108	rpsG	-	-	J	ko:K02992	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
PMJDBAPL_01153	0.0	fusA	-	-	J	ko:K02355	-	ko00000,ko03012,ko03029	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
PMJDBAPL_01154	6.3e-45	isp	-	-	L	-	-	-	Transposase
PMJDBAPL_01155	0.000229	-	-	-	T	ko:K07171	-	ko00000,ko01000,ko02048	Toxin-antitoxin system, toxin component, MazF family
PMJDBAPL_01157	7.01e-41	-	-	-	-	ko:K18829	-	ko00000,ko02048	-
PMJDBAPL_01159	0.0	snf	-	-	KL	-	-	-	domain protein
PMJDBAPL_01160	1.97e-183	ywqE	3.1.3.48	-	GM	ko:K01104	-	ko00000,ko01000	PHP domain protein
PMJDBAPL_01161	3.74e-264	sbcD	-	-	L	ko:K03547	-	ko00000,ko03400	SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity
PMJDBAPL_01162	0.0	sbcC	-	-	L	ko:K03546	-	ko00000,ko03400	Putative exonuclease SbcCD, C subunit
PMJDBAPL_01163	1.1e-191	-	-	-	-	-	-	-	-
PMJDBAPL_01164	4.56e-34	-	3.2.1.14	GH18	-	ko:K01183	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	-
PMJDBAPL_01165	7.35e-108	zur	-	-	P	ko:K02076,ko:K03711	-	ko00000,ko03000	Belongs to the Fur family
PMJDBAPL_01166	8.27e-134	gmk2	2.7.4.8	-	F	ko:K00942	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko00002,ko01000	Guanylate kinase
PMJDBAPL_01167	1.78e-97	-	-	-	F	-	-	-	Nudix hydrolase
PMJDBAPL_01168	0.0	yhdG	-	-	E	ko:K03294	-	ko00000	Amino Acid
PMJDBAPL_01169	7.52e-300	-	-	-	EGP	ko:K08368	-	ko00000,ko02000	Sugar (and other) transporter
PMJDBAPL_01170	4.14e-295	-	-	-	-	-	-	-	-
PMJDBAPL_01171	1.47e-267	potD	-	-	P	ko:K11069	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
PMJDBAPL_01172	3.64e-182	potC	-	-	P	ko:K11070	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
PMJDBAPL_01173	5.02e-187	potB	-	-	P	ko:K11071	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
PMJDBAPL_01174	1.46e-261	potA	3.6.3.30, 3.6.3.31	-	P	ko:K02010,ko:K11072	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
PMJDBAPL_01175	0.0	pepX	3.4.14.11	-	E	ko:K01281	-	ko00000,ko01000,ko01002	Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
PMJDBAPL_01176	1.5e-226	pepR	3.4.11.5	-	E	ko:K01259	ko00330,map00330	ko00000,ko00001,ko01000,ko01002	Releases the N-terminal proline from various substrates
PMJDBAPL_01177	0.0	atp2C1	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	P-type ATPase
PMJDBAPL_01178	1.19e-111	dps	-	-	P	ko:K04047	-	ko00000,ko03036	Belongs to the Dps family
PMJDBAPL_01179	1.41e-315	yagE	-	-	E	-	-	-	amino acid
PMJDBAPL_01180	1.51e-148	-	-	-	S	-	-	-	HAD hydrolase, family IA, variant
PMJDBAPL_01181	1.69e-233	yumC	1.18.1.2, 1.19.1.1	-	C	ko:K21567	-	ko00000,ko01000	Ferredoxin--NADP reductase
PMJDBAPL_01182	2.71e-233	iunH1	3.2.2.1	-	F	ko:K01239	ko00230,ko00760,ko01100,map00230,map00760,map01100	ko00000,ko00001,ko01000	nucleoside hydrolase
PMJDBAPL_01183	4.47e-177	-	-	-	IQ	-	-	-	KR domain
PMJDBAPL_01184	1.03e-171	-	-	-	S	ko:K07090	-	ko00000	membrane transporter protein
PMJDBAPL_01185	3.65e-128	ykoE	-	-	S	ko:K16925	-	ko00000,ko00002,ko02000	ABC-type cobalt transport system, permease component
PMJDBAPL_01186	0.0	-	-	-	S	ko:K16786,ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
PMJDBAPL_01187	8.69e-149	-	-	-	P	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Cobalt transport protein
PMJDBAPL_01188	6.5e-71	-	-	-	-	-	-	-	-
PMJDBAPL_01189	0.0	nhaK	-	-	P	ko:K03316	-	ko00000	Sodium proton antiporter
PMJDBAPL_01190	1.28e-68	-	-	-	S	ko:K08987	-	ko00000	Protein of unknown function (DUF1304)
PMJDBAPL_01191	2.95e-240	ybcH	-	-	D	ko:K06889	-	ko00000	Alpha beta
PMJDBAPL_01192	1.3e-95	-	-	-	K	-	-	-	Transcriptional regulator
PMJDBAPL_01193	4.72e-205	-	-	-	-	-	-	-	-
PMJDBAPL_01194	1.69e-167	idhA	1.1.1.28	-	CH	ko:K03778	ko00620,ko01120,map00620,map01120	ko00000,ko00001,ko01000	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PMJDBAPL_01195	7.84e-215	-	-	-	S	ko:K07088	-	ko00000	Membrane transport protein
PMJDBAPL_01196	9.84e-110	-	-	-	K	-	-	-	FCD
PMJDBAPL_01197	3.32e-36	-	-	-	C	-	-	-	Zinc-binding dehydrogenase
PMJDBAPL_01198	1.27e-80	-	-	-	C	-	-	-	Zinc-binding dehydrogenase
PMJDBAPL_01199	3.39e-49	-	-	-	C	-	-	-	Zinc-binding dehydrogenase
PMJDBAPL_01200	0.0	-	-	-	G	ko:K02775	ko00052,ko01100,ko02060,map00052,map01100,map02060	ko00000,ko00001,ko00002,ko02000	PTS system Galactitol-specific IIC component
PMJDBAPL_01201	1.37e-270	-	-	-	EGP	-	-	-	Major Facilitator
PMJDBAPL_01202	7.9e-176	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter
PMJDBAPL_01203	3.32e-151	-	-	-	-	ko:K01992	-	ko00000,ko00002,ko02000	-
PMJDBAPL_01204	2.98e-10	-	-	-	-	-	-	-	-
PMJDBAPL_01205	1.78e-83	-	-	-	-	-	-	-	-
PMJDBAPL_01206	1e-248	lplA	6.3.1.20	-	H	ko:K03800	ko00785,ko01100,map00785,map01100	ko00000,ko00001,ko01000	Lipoate-protein ligase
PMJDBAPL_01207	7.46e-106	uspA3	-	-	T	-	-	-	universal stress protein
PMJDBAPL_01208	0.0	fusA1	-	-	J	-	-	-	elongation factor G
PMJDBAPL_01209	4.39e-213	-	-	-	GK	-	-	-	ROK family
PMJDBAPL_01210	3.4e-311	brnQ	-	-	U	ko:K03311	-	ko00000	Component of the transport system for branched-chain amino acids
PMJDBAPL_01211	3.16e-178	yfhR3	-	-	S	ko:K06889	-	ko00000	Serine hydrolase (FSH1)
PMJDBAPL_01212	2.37e-307	-	-	-	E	-	-	-	amino acid
PMJDBAPL_01213	0.0	xfp	4.1.2.22, 4.1.2.9	-	G	ko:K01621	ko00030,ko00710,ko01100,ko01120,map00030,map00710,map01100,map01120	ko00000,ko00001,ko01000	Phosphoketolase
PMJDBAPL_01214	1.05e-171	gntR	-	-	K	-	-	-	UbiC transcription regulator-associated domain protein
PMJDBAPL_01215	2.85e-114	ebsC	-	-	J	ko:K03976	-	ko00000,ko01000,ko03016	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
PMJDBAPL_01216	0.0	-	-	-	S	-	-	-	Uncharacterised protein family (UPF0236)
PMJDBAPL_01217	5.17e-32	-	-	-	S	-	-	-	Acyltransferase family
PMJDBAPL_01219	1.87e-56	-	-	-	S	-	-	-	Glycosyltransferase like family 2
PMJDBAPL_01220	1.15e-31	-	-	-	M	-	-	-	Glycosyltransferase, group 2 family protein
PMJDBAPL_01221	4.89e-36	-	-	-	M	-	-	-	PFAM Glycosyl transferase family 2
PMJDBAPL_01222	1.11e-32	-	-	-	M	-	-	-	Glycosyltransferase sugar-binding region containing DXD motif
PMJDBAPL_01223	1.99e-85	cps2I	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
PMJDBAPL_01225	2.24e-49	-	-	-	M	-	-	-	Glycosyltransferase GT-D fold
PMJDBAPL_01226	3.78e-80	wefC	-	-	M	-	-	-	Stealth protein CR2, conserved region 2
PMJDBAPL_01227	1.07e-104	-	-	GT4	G	ko:K19422	-	ko00000,ko01000	Glycosyl transferase 4-like domain
PMJDBAPL_01228	2.55e-59	capM	-	-	M	ko:K13012	-	ko00000,ko01005	Bacterial sugar transferase
PMJDBAPL_01229	3.01e-140	ywqD	-	-	D	-	-	-	Capsular exopolysaccharide family
PMJDBAPL_01230	6.16e-126	epsB	-	-	M	-	-	-	biosynthesis protein
PMJDBAPL_01231	3.32e-204	-	-	-	L	ko:K07497	-	ko00000	hmm pf00665
PMJDBAPL_01232	1.41e-154	-	-	-	L	-	-	-	Helix-turn-helix domain
PMJDBAPL_01234	4.77e-65	yrvD	-	-	S	-	-	-	Pfam:DUF1049
PMJDBAPL_01235	1.29e-191	-	3.1.3.102, 3.1.3.104	-	S	ko:K20861	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	hydrolase
PMJDBAPL_01236	1.38e-117	ntd	2.4.2.6	-	F	ko:K08728	ko00240,map00240	ko00000,ko00001,ko01000	Nucleoside
PMJDBAPL_01237	1.75e-29	-	-	-	-	-	-	-	-
PMJDBAPL_01238	3.09e-211	-	-	-	S	-	-	-	Alpha/beta hydrolase of unknown function (DUF915)
PMJDBAPL_01239	5.93e-149	-	-	-	S	-	-	-	Protein of unknown function (DUF421)
PMJDBAPL_01240	3.21e-94	-	-	-	S	-	-	-	Protein of unknown function (DUF3290)
PMJDBAPL_01241	4.12e-56	-	-	-	S	ko:K09790	-	ko00000	Protein of unknown function (DUF454)
PMJDBAPL_01242	0.0	-	-	-	I	-	-	-	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PMJDBAPL_01243	1.34e-199	endA	-	-	V	ko:K15051	-	ko00000	DNA/RNA non-specific endonuclease
PMJDBAPL_01244	0.0	yifK	-	-	E	ko:K03293	-	ko00000	Amino acid permease
PMJDBAPL_01246	0.0	dxs	2.2.1.7	-	H	ko:K01662	ko00730,ko00900,ko01100,ko01110,ko01130,map00730,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
PMJDBAPL_01247	1.09e-292	-	-	-	N	ko:K09384	-	ko00000	Uncharacterized conserved protein (DUF2075)
PMJDBAPL_01248	5.85e-158	-	-	-	S	-	-	-	SNARE associated Golgi protein
PMJDBAPL_01249	0.0	uvrA2	-	-	L	ko:K03701	ko03420,map03420	ko00000,ko00001,ko03400	excinuclease ABC, A subunit
PMJDBAPL_01250	4.25e-71	crcB	-	-	U	ko:K06199	-	ko00000,ko02000	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PMJDBAPL_01251	6.94e-74	crcB	-	-	D	ko:K06199	-	ko00000,ko02000	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PMJDBAPL_01252	3.39e-90	-	-	-	E	-	-	-	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PMJDBAPL_01253	2.72e-174	-	-	-	S	-	-	-	DUF218 domain
PMJDBAPL_01254	0.0	ubiB	-	-	S	ko:K03688	-	ko00000	ABC1 family
PMJDBAPL_01255	2.75e-316	yhdP	-	-	S	-	-	-	Transporter associated domain
PMJDBAPL_01256	2.39e-98	atkY	-	-	K	ko:K02171	ko01501,map01501	ko00000,ko00001,ko00002,ko01504,ko03000	Copper transport repressor CopY TcrY
PMJDBAPL_01257	4.8e-308	-	-	-	U	-	-	-	Belongs to the major facilitator superfamily
PMJDBAPL_01258	6.68e-98	-	-	-	S	-	-	-	UPF0756 membrane protein
PMJDBAPL_01259	1.51e-104	-	-	-	S	-	-	-	Cupin domain
PMJDBAPL_01260	1.87e-54	-	-	-	K	-	-	-	Transcriptional regulator
PMJDBAPL_01261	3.73e-213	yvgN	-	-	C	-	-	-	Aldo keto reductase
PMJDBAPL_01262	2.82e-49	XK27_08630	-	-	T	ko:K07166	-	ko00000	Belongs to the UPF0237 family
PMJDBAPL_01263	2.84e-104	XK27_08635	-	-	S	ko:K09157	-	ko00000	UPF0210 protein
PMJDBAPL_01264	3.41e-179	XK27_08635	-	-	S	ko:K09157	-	ko00000	UPF0210 protein
PMJDBAPL_01265	4.52e-123	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
PMJDBAPL_01266	5.98e-206	-	-	-	S	-	-	-	Alpha beta hydrolase
PMJDBAPL_01267	1.97e-60	gspA	-	-	M	-	-	-	family 8
PMJDBAPL_01268	8.09e-110	gspA	-	-	M	-	-	-	family 8
PMJDBAPL_01269	3.56e-153	yagB	-	-	S	ko:K06950	-	ko00000	Metal dependent phosphohydrolases with conserved 'HD' motif.
PMJDBAPL_01270	7.18e-126	-	-	-	-	-	-	-	-
PMJDBAPL_01271	2.43e-206	-	-	-	S	-	-	-	EDD domain protein, DegV family
PMJDBAPL_01272	0.0	FbpA	-	-	K	-	-	-	Fibronectin-binding protein
PMJDBAPL_01273	0.0	carB	6.3.5.5	-	F	ko:K01955	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthase
PMJDBAPL_01274	2.62e-263	carA	6.3.5.5	-	F	ko:K01956	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the CarA family
PMJDBAPL_01275	1.88e-220	rluD	5.4.99.23	-	J	ko:K06180	-	ko00000,ko01000,ko03009	Responsible for synthesis of pseudouridine from uracil
PMJDBAPL_01276	1.41e-93	lspA	3.4.23.36	-	MU	ko:K03101	ko03060,map03060	ko00000,ko00001,ko01000,ko01002	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
PMJDBAPL_01277	2.58e-85	esbA	-	-	S	-	-	-	Family of unknown function (DUF5322)
PMJDBAPL_01278	5.39e-92	rnhA	3.1.26.4	-	L	ko:K03469	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Ribonuclease HI
PMJDBAPL_01279	3.58e-284	ypsC	-	-	L	ko:K07444	-	ko00000,ko01000	Belongs to the methyltransferase superfamily
PMJDBAPL_01280	1.01e-109	nrdI	-	-	F	ko:K03647	-	ko00000	Belongs to the NrdI family
PMJDBAPL_01281	6.82e-74	gpsB	-	-	D	-	-	-	Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
PMJDBAPL_01282	7.62e-132	ypsA	-	-	S	-	-	-	Belongs to the UPF0398 family
PMJDBAPL_01283	1.93e-150	recU	-	-	L	ko:K03700	-	ko00000,ko03400	Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
PMJDBAPL_01284	0.0	ponA	2.4.1.129, 3.4.16.4	GT51	M	ko:K05366	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01003,ko01011	penicillin-binding protein 1A
PMJDBAPL_01285	2.32e-206	-	-	-	EG	-	-	-	EamA-like transporter family
PMJDBAPL_01286	2.28e-157	dnaD	-	-	L	ko:K02086	-	ko00000	DnaD domain protein
PMJDBAPL_01287	1.91e-114	ypmB	-	-	S	-	-	-	Protein conserved in bacteria
PMJDBAPL_01288	0.0	dinG	3.6.4.12	-	L	ko:K03722	-	ko00000,ko01000,ko03400	helicase involved in DNA repair and perhaps also replication
PMJDBAPL_01289	1.16e-216	mvk	2.7.1.36	-	I	ko:K00869	ko00900,ko01100,ko01110,ko01130,ko04146,map00900,map01100,map01110,map01130,map04146	ko00000,ko00001,ko00002,ko01000	mevalonate kinase
PMJDBAPL_01290	6.25e-220	mvaD	4.1.1.33	-	I	ko:K01597	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	diphosphomevalonate decarboxylase
PMJDBAPL_01291	1.37e-272	mvaK2	2.7.4.2	-	I	ko:K00938	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	phosphomevalonate kinase
PMJDBAPL_01292	8.91e-248	fni	5.3.3.2	-	C	ko:K01823	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
PMJDBAPL_01293	5.52e-119	-	-	-	S	ko:K08996	-	ko00000	Protein of unknown function (DUF1440)
PMJDBAPL_01294	0.0	melA	3.2.1.22	-	G	ko:K07407	ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603	ko00000,ko00001,ko01000	alpha-galactosidase
PMJDBAPL_01295	4.39e-244	galR	-	-	K	ko:K02529	-	ko00000,ko03000	Periplasmic binding protein-like domain
PMJDBAPL_01296	5.79e-214	scrK	2.7.1.4	-	GK	ko:K00847	ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100	ko00000,ko00001,ko01000	ROK family
PMJDBAPL_01297	6.86e-229	ldh	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	Belongs to the LDH MDH superfamily. LDH family
PMJDBAPL_01298	6.23e-161	lrgB	-	-	M	ko:K05339	ko02020,map02020	ko00000,ko00001	LrgB-like family
PMJDBAPL_01299	3.69e-87	lrgA	-	-	S	ko:K05338	ko02020,map02020	ko00000,ko00001,ko02000	LrgA family
PMJDBAPL_01300	4.81e-168	lytT	-	-	K	ko:K07705	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	response regulator receiver
PMJDBAPL_01301	0.0	lytS	2.7.13.3	-	T	ko:K07704	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	LytS YhcK-type transmembrane receptor domain protein
PMJDBAPL_01302	7.33e-190	-	-	-	O	-	-	-	Band 7 protein
PMJDBAPL_01303	0.0	rsmF	-	-	J	-	-	-	NOL1 NOP2 sun family protein
PMJDBAPL_01304	2.62e-199	yitU	3.1.3.104	-	S	ko:K21064	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	hydrolase
PMJDBAPL_01305	1.43e-51	-	-	-	S	-	-	-	Cytochrome B5
PMJDBAPL_01306	6.57e-144	nreC	-	-	K	ko:K07696	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	PFAM regulatory protein LuxR
PMJDBAPL_01307	7.79e-205	-	-	-	K	ko:K20480	ko02024,map02024	ko00000,ko00001,ko03000	Helix-turn-helix
PMJDBAPL_01308	3.38e-76	-	-	-	S	-	-	-	Iron-sulfur cluster assembly protein
PMJDBAPL_01309	0.0	sufB	-	-	O	ko:K07033,ko:K09014	-	ko00000	assembly protein SufB
PMJDBAPL_01310	1.07e-104	nifU	-	-	C	ko:K04488	-	ko00000	SUF system FeS assembly protein, NifU family
PMJDBAPL_01311	3.17e-299	sufS	2.8.1.7, 4.4.1.16	-	E	ko:K11717	ko00450,ko01100,map00450,map01100	ko00000,ko00001,ko01000	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
PMJDBAPL_01312	9.59e-305	sufD	-	-	O	ko:K07033,ko:K09015	-	ko00000	FeS assembly protein SufD
PMJDBAPL_01313	5.43e-185	sufC	-	-	O	ko:K09013	-	ko00000,ko02000	FeS assembly ATPase SufC
PMJDBAPL_01314	2.32e-43	feoA	-	-	P	ko:K04758	-	ko00000,ko02000	FeoA domain
PMJDBAPL_01315	0.0	feoB	-	-	P	ko:K04759	-	ko00000,ko02000	transporter of a GTP-driven Fe(2 ) uptake system
PMJDBAPL_01316	0.0	menE	6.2.1.26	-	H	ko:K01911	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Belongs to the ATP-dependent AMP-binding enzyme family. MenE subfamily
PMJDBAPL_01317	8.13e-200	menB	4.1.3.36	-	H	ko:K01661	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
PMJDBAPL_01318	4.73e-85	yuxO	-	-	Q	-	-	-	Thioesterase superfamily
PMJDBAPL_01319	2.37e-140	-	-	-	K	ko:K03091	-	ko00000,ko03021	RNA polymerase sigma factor, sigma-70 family
PMJDBAPL_01320	2.75e-197	-	-	-	G	-	-	-	Transporter, major facilitator family protein
PMJDBAPL_01321	0.0	yfhO	-	-	S	-	-	-	Bacterial membrane protein YfhO
PMJDBAPL_01322	3.01e-145	-	-	-	T	ko:K10716	-	ko00000,ko02000	Ion transport 2 domain protein
PMJDBAPL_01323	2.72e-102	ribH	2.5.1.78	-	H	ko:K00794	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin
PMJDBAPL_01324	9.19e-287	ribBA	3.5.4.25, 4.1.99.12	-	H	ko:K14652	ko00740,ko00790,ko01100,ko01110,map00740,map00790,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate
PMJDBAPL_01325	9.71e-124	ribE	2.5.1.9	-	H	ko:K00793	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Riboflavin synthase
PMJDBAPL_01326	4.62e-232	ribD	1.1.1.193, 3.5.4.26	-	H	ko:K11752	ko00740,ko01100,ko01110,ko02024,map00740,map01100,map01110,map02024	ko00000,ko00001,ko00002,ko01000	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
PMJDBAPL_01327	3.15e-229	rihA	-	-	F	ko:K01250	-	ko00000,ko01000	Inosine-uridine preferring nucleoside hydrolase
PMJDBAPL_01329	0.0	-	-	-	L	-	-	-	PLD-like domain
PMJDBAPL_01330	6.57e-21	-	-	-	-	-	-	-	-
PMJDBAPL_01333	5.23e-86	mrr2	-	-	L	ko:K07448	-	ko00000,ko02048	restriction endonuclease
PMJDBAPL_01334	2.28e-292	-	-	-	L	-	-	-	Integrase core domain
PMJDBAPL_01335	1.36e-109	-	-	-	LM	-	-	-	gp58-like protein
PMJDBAPL_01339	1.16e-238	-	-	-	M	-	-	-	lysozyme activity
PMJDBAPL_01342	5.94e-223	-	-	-	S	-	-	-	peptidoglycan catabolic process
PMJDBAPL_01344	2.04e-59	-	-	-	S	-	-	-	Pfam:Phage_TAC_12
PMJDBAPL_01345	3.82e-110	-	-	-	S	-	-	-	Phage major tail protein 2
PMJDBAPL_01346	5.12e-56	-	-	-	-	-	-	-	-
PMJDBAPL_01347	7.29e-58	-	-	-	S	-	-	-	exonuclease activity
PMJDBAPL_01349	6.67e-61	-	-	-	S	-	-	-	Phage gp6-like head-tail connector protein
PMJDBAPL_01350	6.99e-148	-	-	-	-	-	-	-	-
PMJDBAPL_01351	3.11e-83	-	-	-	S	-	-	-	aminoacyl-tRNA ligase activity
PMJDBAPL_01353	3.43e-175	-	-	-	S	-	-	-	Phage Mu protein F like protein
PMJDBAPL_01354	3.49e-258	-	-	-	S	-	-	-	Phage portal protein, SPP1 Gp6-like
PMJDBAPL_01355	1.22e-274	yqaT	-	-	S	ko:K06909	-	ko00000	Phage terminase, large subunit
PMJDBAPL_01356	4.93e-83	-	-	-	L	ko:K07474	-	ko00000	Terminase small subunit
PMJDBAPL_01358	2.33e-101	-	-	-	S	-	-	-	Phage transcriptional regulator, ArpU family
PMJDBAPL_01363	6.95e-18	-	-	-	-	-	-	-	-
PMJDBAPL_01367	7.5e-108	-	-	-	Q	-	-	-	DNA (cytosine-5-)-methyltransferase activity
PMJDBAPL_01368	1.5e-77	-	-	-	S	-	-	-	VRR_NUC
PMJDBAPL_01370	1.91e-297	-	-	-	S	ko:K06919	-	ko00000	Virulence-associated protein E
PMJDBAPL_01371	4.65e-185	-	-	-	S	-	-	-	Bifunctional DNA primase/polymerase, N-terminal
PMJDBAPL_01372	2.34e-119	-	-	-	-	-	-	-	-
PMJDBAPL_01373	1.5e-181	-	-	-	L	-	-	-	AAA domain
PMJDBAPL_01374	0.0	-	-	-	L	-	-	-	Helicase C-terminal domain protein
PMJDBAPL_01375	3.79e-101	-	-	-	S	-	-	-	Siphovirus Gp157
PMJDBAPL_01377	4.37e-43	-	-	-	-	-	-	-	-
PMJDBAPL_01380	8.29e-49	-	-	-	-	-	-	-	-
PMJDBAPL_01381	5.85e-09	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
PMJDBAPL_01382	4.77e-20	-	-	-	K	-	-	-	Helix-turn-helix
PMJDBAPL_01383	3.22e-22	-	-	-	E	-	-	-	Zn peptidase
PMJDBAPL_01384	1.64e-35	-	-	-	S	-	-	-	Bacterial PH domain
PMJDBAPL_01385	4.85e-25	-	-	-	-	-	-	-	-
PMJDBAPL_01386	8.95e-273	int2	-	-	L	-	-	-	Belongs to the 'phage' integrase family
PMJDBAPL_01394	6.29e-91	-	-	-	L	-	-	-	Integrase core domain
PMJDBAPL_01395	1.22e-290	-	-	-	S	-	-	-	amidohydrolase
PMJDBAPL_01396	1.04e-24	-	-	-	S	-	-	-	amidohydrolase
PMJDBAPL_01398	1.67e-45	-	-	-	K	-	-	-	LysR substrate binding domain
PMJDBAPL_01399	0.000336	-	-	-	S	-	-	-	Protein of unknown function (DUF1211)
PMJDBAPL_01400	1.57e-10	-	-	-	S	-	-	-	Protein of unknown function (DUF1211)
PMJDBAPL_01402	2.73e-205	-	-	-	S	-	-	-	reductase
PMJDBAPL_01403	9.23e-116	-	2.3.1.183	-	M	ko:K03823	ko00440,ko01130,map00440,map01130	ko00000,ko00001,ko01000	Acetyltransferase, GNAT family
PMJDBAPL_01404	2.44e-147	lepB	3.4.21.89	-	U	ko:K03100	ko02024,ko03060,map02024,map03060	ko00000,ko00001,ko01000,ko01002	Belongs to the peptidase S26 family
PMJDBAPL_01405	1.81e-315	yxbA	6.3.1.12	-	S	ko:K17810	-	ko00000,ko01000	ATP-grasp enzyme
PMJDBAPL_01406	0.0	murE	6.3.2.13, 6.3.2.7	-	M	ko:K01928,ko:K05362	ko00300,ko00550,ko01100,map00300,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
PMJDBAPL_01407	0.0	asnB	6.3.5.4	-	E	ko:K01953	ko00250,ko01100,ko01110,map00250,map01100,map01110	ko00000,ko00001,ko01000,ko01002	Asparagine synthase
PMJDBAPL_01408	0.0	gidA	-	-	D	ko:K03495	-	ko00000,ko03016,ko03036	NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
PMJDBAPL_01409	0.0	mnmE	-	-	S	ko:K03650	-	ko00000,ko01000,ko03016	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
PMJDBAPL_01410	4.22e-168	jag	-	-	S	ko:K06346	-	ko00000	R3H domain protein
PMJDBAPL_01411	2.96e-172	yidC	-	-	U	ko:K03217	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044,ko03029	Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PMJDBAPL_01412	1.39e-76	rnpA	3.1.26.5	-	J	ko:K03536	-	ko00000,ko01000,ko03016	RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
PMJDBAPL_01413	7.96e-21	rpmH	-	-	J	ko:K02914	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL34 family
PMJDBAPL_01414	0.0	dnaA	-	-	L	ko:K02313	ko02020,ko04112,map02020,map04112	ko00000,ko00001,ko03032,ko03036	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
PMJDBAPL_01415	1.15e-262	dnaN	2.7.7.7	-	L	ko:K02338	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
PMJDBAPL_01416	5.41e-47	yaaA	-	-	S	ko:K14761	-	ko00000,ko03009	S4 domain protein YaaA
PMJDBAPL_01417	1.7e-261	recF	-	-	L	ko:K03629	ko03440,map03440	ko00000,ko00001,ko03400	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
PMJDBAPL_01418	0.0	gyrB	5.99.1.3	-	L	ko:K02470	-	ko00000,ko01000,ko03032,ko03400	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PMJDBAPL_01419	0.0	gyrA	5.99.1.3	-	L	ko:K02469	-	ko00000,ko01000,ko03032,ko03400	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PMJDBAPL_01420	4.55e-64	rpsF	-	-	J	ko:K02990	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Binds together with S18 to 16S ribosomal RNA
PMJDBAPL_01421	5.93e-114	ssb	-	-	L	ko:K03111	ko03030,ko03430,ko03440,map03030,map03430,map03440	ko00000,ko00001,ko03029,ko03032,ko03400	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
PMJDBAPL_01422	9.36e-48	rpsR	-	-	J	ko:K02963	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
PMJDBAPL_01423	0.0	yybT	-	-	T	-	-	-	signaling protein consisting of a modified GGDEF domain and a DHH domain
PMJDBAPL_01424	1.25e-97	rplI	-	-	J	ko:K02939	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to the 23S rRNA
PMJDBAPL_01425	1.48e-306	dnaB	3.6.4.12	-	L	ko:K02314	ko03030,ko04112,map03030,map04112	ko00000,ko00001,ko01000,ko03032	Participates in initiation and elongation during chromosome replication
PMJDBAPL_01426	1.87e-269	yttB	-	-	EGP	-	-	-	Major Facilitator
PMJDBAPL_01427	3.85e-72	-	-	-	-	-	-	-	-
PMJDBAPL_01428	2.17e-209	-	-	-	S	-	-	-	Polyphosphate nucleotide phosphotransferase, PPK2 family
PMJDBAPL_01429	2.25e-157	-	-	-	S	-	-	-	Fic/DOC family
PMJDBAPL_01431	1.49e-93	-	-	-	K	ko:K18909	-	ko00000,ko00002,ko01504,ko03000	helix_turn_helix multiple antibiotic resistance protein
PMJDBAPL_01432	0.0	lmrA	3.6.3.44	-	V	ko:K02021,ko:K18104	ko01501,ko02010,map01501,map02010	ko00000,ko00001,ko00002,ko01000,ko01504,ko02000	ABC transporter
PMJDBAPL_01434	2.6e-168	yycF	-	-	K	ko:K07668	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	response regulator
PMJDBAPL_01435	0.0	vicK	2.7.13.3	-	T	ko:K07652	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
PMJDBAPL_01436	8.68e-316	yycH	-	-	S	-	-	-	YycH protein
PMJDBAPL_01437	7.14e-193	yycI	-	-	S	-	-	-	YycH protein
PMJDBAPL_01438	1.46e-195	vicX	3.1.26.11	-	S	ko:K00784	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	domain protein
PMJDBAPL_01439	2.46e-289	htrA	3.4.21.107	-	O	ko:K04771	ko01503,ko02020,map01503,map02020	ko00000,ko00001,ko00002,ko01000,ko01002,ko03110	serine protease
PMJDBAPL_01440	5.79e-117	pgpA	-	-	I	-	-	-	Phosphatidylglycerophosphatase A
PMJDBAPL_01441	2.9e-108	rlmH	2.1.1.177	-	J	ko:K00783	-	ko00000,ko01000,ko03009	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
PMJDBAPL_01442	1.1e-125	-	-	-	S	-	-	-	reductase
PMJDBAPL_01443	1.08e-288	dhaT	1.1.1.202	-	C	ko:K00086	ko00561,ko00640,map00561,map00640	ko00000,ko00001,ko01000	Dehydrogenase
PMJDBAPL_01444	8.4e-200	-	-	-	U	ko:K05340	-	ko00000,ko02000	sugar transport
PMJDBAPL_01445	3.57e-191	-	-	-	E	-	-	-	Glyoxalase-like domain
PMJDBAPL_01446	1.44e-187	-	1.5.1.2	-	E	ko:K00286	ko00330,ko01100,ko01110,ko01130,ko01230,map00330,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
PMJDBAPL_01447	0.0	gabD	1.2.1.16, 1.2.1.20, 1.2.1.79	-	C	ko:K00135	ko00250,ko00310,ko00350,ko00650,ko00760,ko01100,ko01120,map00250,map00310,map00350,map00650,map00760,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Belongs to the aldehyde dehydrogenase family
PMJDBAPL_01448	5.54e-198	hlyD3	-	-	M	ko:K02005	-	ko00000	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PMJDBAPL_01449	2.4e-167	-	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter
PMJDBAPL_01450	1.13e-271	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	MacB-like periplasmic core domain
PMJDBAPL_01451	1.42e-69	-	-	-	-	-	-	-	-
PMJDBAPL_01452	4.51e-64	p75	-	-	M	ko:K21471	-	ko00000,ko01000,ko01002,ko01011	NlpC P60 family protein
PMJDBAPL_01453	7.88e-292	-	-	-	S	-	-	-	Putative peptidoglycan binding domain
PMJDBAPL_01456	1.38e-248	-	2.7.13.3	-	T	ko:K07706	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	GHKL domain
PMJDBAPL_01457	1.13e-172	-	-	-	K	ko:K07707	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko02022	LytTr DNA-binding domain
PMJDBAPL_01459	4.44e-313	comA	-	-	V	ko:K06147,ko:K06148,ko:K12292,ko:K20344	ko02010,ko02020,ko02024,map02010,map02020,map02024	ko00000,ko00001,ko01000,ko02000	ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
PMJDBAPL_01461	2.39e-98	-	-	-	O	-	-	-	OsmC-like protein
PMJDBAPL_01462	6.38e-233	ldhD	1.1.1.28	-	CH	ko:K03778	ko00620,ko01120,map00620,map01120	ko00000,ko00001,ko01000	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PMJDBAPL_01463	1.1e-279	-	-	-	E	ko:K00841	ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase
PMJDBAPL_01464	2.49e-43	-	-	-	-	-	-	-	-
PMJDBAPL_01465	0.0	clpE	-	-	O	ko:K03697,ko:K04086	-	ko00000,ko03110	associated with various cellular activities
PMJDBAPL_01466	5.1e-264	menC	4.2.1.113	-	H	ko:K02549	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB)
PMJDBAPL_01468	7.9e-136	-	-	-	K	-	-	-	PFAM GCN5-related N-acetyltransferase
PMJDBAPL_01469	0.0	cls	-	-	I	ko:K06131	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PMJDBAPL_01470	2.6e-215	cpsY	-	-	K	-	-	-	Transcriptional regulator, LysR family
PMJDBAPL_01471	1.9e-268	metE	2.1.1.14	-	E	ko:K00549	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
PMJDBAPL_01472	7.72e-186	metE	2.1.1.14	-	E	ko:K00549	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
PMJDBAPL_01473	1.77e-198	metF	1.5.1.20	-	C	ko:K00297	ko00670,ko00720,ko01100,ko01120,ko01200,ko01523,map00670,map00720,map01100,map01120,map01200,map01523	ko00000,ko00001,ko00002,ko01000	Methylenetetrahydrofolate reductase
PMJDBAPL_01474	8.02e-70	folD	1.5.1.5, 3.5.4.9	-	F	ko:K01491	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
PMJDBAPL_01475	4.85e-71	folD	1.5.1.5, 3.5.4.9	-	F	ko:K01491	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
PMJDBAPL_01477	9.49e-282	-	-	-	L	-	-	-	transposase IS116 IS110 IS902 family protein
PMJDBAPL_01478	1.42e-189	-	-	-	L	-	-	-	Transposase
PMJDBAPL_01479	0.0	pepD3	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
PMJDBAPL_01480	4.3e-256	-	-	-	C	-	-	-	Belongs to the LDH2 MDH2 oxidoreductase family
PMJDBAPL_01481	1.37e-221	ldh	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	Belongs to the LDH MDH superfamily. LDH family
PMJDBAPL_01483	6.77e-77	-	-	-	-	-	-	-	-
PMJDBAPL_01484	1.19e-231	prmA	-	-	J	ko:K02687	-	ko00000,ko01000,ko03009	Ribosomal protein L11 methyltransferase
PMJDBAPL_01485	1.08e-161	rsmE	2.1.1.193	-	J	ko:K09761	-	ko00000,ko01000,ko03009	Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
PMJDBAPL_01486	5.61e-71	-	-	-	-	-	-	-	-
PMJDBAPL_01487	0.0	relA	2.7.6.5	-	KT	ko:K00951	ko00230,map00230	ko00000,ko00001,ko01000	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
PMJDBAPL_01488	1.88e-101	dtd	-	-	J	ko:K07560	-	ko00000,ko01000,ko03016	rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
PMJDBAPL_01489	3.6e-41	-	-	-	L	ko:K07497	-	ko00000	PFAM Integrase catalytic region
PMJDBAPL_01490	1.87e-74	-	-	-	S	-	-	-	Pfam:DUF59
PMJDBAPL_01491	8.25e-250	moaA	4.1.99.22	-	H	ko:K03639	ko00790,ko01100,ko04122,map00790,map01100,map04122	ko00000,ko00001,ko01000	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
PMJDBAPL_01492	2.02e-22	-	-	-	K	-	-	-	Transcriptional regulator, LacI family
PMJDBAPL_01493	3e-113	moaC	4.6.1.17	-	H	ko:K03637	ko00790,ko01100,ko04122,map00790,map01100,map04122	ko00000,ko00001,ko01000	Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP)
PMJDBAPL_01494	5.86e-118	-	-	-	L	-	-	-	Integrase
PMJDBAPL_01495	1.85e-55	-	-	-	-	-	-	-	-
PMJDBAPL_01496	2.25e-117	-	-	-	K	ko:K21562	-	ko00000,ko03000	Transcriptional regulator, Crp Fnr family
PMJDBAPL_01497	0.0	-	-	-	S	-	-	-	SEC-C Motif Domain Protein
PMJDBAPL_01498	5.03e-67	-	-	-	-	-	-	-	-
PMJDBAPL_01499	4.58e-179	thiM	2.7.1.50	-	H	ko:K00878	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
PMJDBAPL_01500	2.05e-188	thiD	2.7.1.49, 2.7.4.7	-	H	ko:K00941	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Phosphomethylpyrimidine kinase
PMJDBAPL_01501	1.57e-150	thiE	2.5.1.3	-	H	ko:K00788	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)
PMJDBAPL_01502	3.54e-295	-	-	-	P	-	-	-	Chloride transporter, ClC family
PMJDBAPL_01503	0.0	agl	3.2.1.20	GH31	G	ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 31 family
PMJDBAPL_01504	7.78e-150	-	-	-	I	-	-	-	Acid phosphatase homologues
PMJDBAPL_01506	4.87e-11	-	-	-	-	-	-	-	-
PMJDBAPL_01507	3.28e-230	ykpB	1.1.1.169	-	H	ko:K00077	ko00770,ko01100,ko01110,map00770,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
PMJDBAPL_01508	5.98e-287	mtnE	-	-	E	ko:K08969	ko00270,ko01100,map00270,map01100	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase
PMJDBAPL_01509	9e-182	mtnU	3.5.1.3	-	S	ko:K13566	ko00250,map00250	ko00000,ko00001,ko01000	Carbon-nitrogen hydrolase
PMJDBAPL_01510	4.25e-176	proB	2.7.2.11	-	F	ko:K00931	ko00330,ko00332,ko01100,ko01130,ko01230,map00330,map00332,map01100,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
PMJDBAPL_01511	2.02e-287	proA	1.2.1.41	-	E	ko:K00147	ko00330,ko00332,ko01100,ko01110,ko01130,ko01230,map00330,map00332,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
PMJDBAPL_01512	1.32e-172	proC	1.5.1.2	-	E	ko:K00286	ko00330,ko01100,ko01110,ko01130,ko01230,map00330,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
PMJDBAPL_01513	6.69e-112	-	-	-	L	ko:K07491	-	ko00000	PFAM transposase IS200-family protein
PMJDBAPL_01514	6.08e-253	tsaD	2.3.1.234	-	J	ko:K01409	-	ko00000,ko01000,ko03016	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
PMJDBAPL_01515	4.12e-133	rimI	2.3.1.128	-	K	ko:K03789	-	ko00000,ko01000,ko03009	Ribosomal-protein-alanine acetyltransferase
PMJDBAPL_01516	2.99e-161	yeaZ	2.3.1.234	-	O	ko:K01409,ko:K14742	-	ko00000,ko01000,ko03016	Universal bacterial protein YeaZ
PMJDBAPL_01517	9.98e-246	galE	5.1.3.2	-	M	ko:K01784	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the NAD(P)-dependent epimerase dehydratase family
PMJDBAPL_01518	7.94e-223	ppx	3.6.1.11, 3.6.1.40	-	FP	ko:K01524	ko00230,map00230	ko00000,ko00001,ko01000	exopolyphosphatase
PMJDBAPL_01519	0.0	ppk	2.7.4.1	-	P	ko:K00937	ko00190,ko03018,map00190,map03018	ko00000,ko00001,ko01000,ko03019	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
PMJDBAPL_01520	0.0	ppx3	3.6.1.11, 3.6.1.40	-	FP	ko:K01524	ko00230,map00230	ko00000,ko00001,ko01000	exopolyphosphatase
PMJDBAPL_01521	1.28e-177	fat	3.1.2.21	-	I	ko:K01071	ko00061,ko01100,map00061,map01100	ko00000,ko00001,ko01000,ko01004	Acyl-ACP thioesterase
PMJDBAPL_01522	7.46e-199	rsmI	2.1.1.198	-	H	ko:K07056	-	ko00000,ko01000,ko03009	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
PMJDBAPL_01523	3.71e-76	yabA	-	-	L	-	-	-	Involved in initiation control of chromosome replication
PMJDBAPL_01524	2.05e-232	holB	2.7.7.7	-	L	ko:K02341	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III
PMJDBAPL_01525	2.83e-69	yaaQ	-	-	S	-	-	-	Cyclic-di-AMP receptor
PMJDBAPL_01526	3.7e-148	tmk	2.7.4.9	-	F	ko:K00943	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
PMJDBAPL_01527	4.67e-52	-	-	-	S	-	-	-	Protein of unknown function (DUF2508)
PMJDBAPL_01528	3.33e-140	recR	-	-	L	ko:K06187	ko03440,map03440	ko00000,ko00001,ko03400	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
PMJDBAPL_01529	5.87e-62	yaaK	-	-	S	ko:K09747	-	ko00000	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
PMJDBAPL_01530	0.0	dnaX	2.7.7.7	-	L	ko:K02343	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PMJDBAPL_01531	1.25e-118	tadA	3.5.4.33	-	F	ko:K11991	-	ko00000,ko01000,ko03016	Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
PMJDBAPL_01532	9.33e-48	nrdH	-	-	O	ko:K06191	-	ko00000	Glutaredoxin
PMJDBAPL_01533	0.0	nrdE	1.17.4.1	-	F	ko:K00525	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PMJDBAPL_01534	3.81e-254	nrdF	1.17.4.1	-	F	ko:K00526	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PMJDBAPL_01535	0.0	adhE	1.1.1.1, 1.2.1.10	-	C	ko:K04072	ko00010,ko00071,ko00350,ko00620,ko00625,ko00626,ko00650,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00620,map00625,map00626,map00650,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	belongs to the iron- containing alcohol dehydrogenase family
PMJDBAPL_01536	8.65e-175	-	-	-	S	ko:K11621	ko02020,map02020	ko00000,ko00001	Putative adhesin
PMJDBAPL_01537	1.93e-120	-	-	-	S	-	-	-	Protein of unknown function (DUF1700)
PMJDBAPL_01538	9.71e-76	XK27_06915	-	-	K	ko:K10947	-	ko00000,ko03000	transcriptional regulator PadR family
PMJDBAPL_01539	3.04e-65	-	-	-	L	-	-	-	Bacterial dnaA protein
PMJDBAPL_01540	2.68e-204	-	-	-	L	-	-	-	Transposase
PMJDBAPL_01541	1.01e-61	-	-	-	-	-	-	-	-
PMJDBAPL_01542	2.92e-119	-	-	-	S	-	-	-	N-acetylmuramoyl-L-alanine amidase activity
PMJDBAPL_01543	2.78e-98	-	-	-	S	-	-	-	Bacteriophage holin family
PMJDBAPL_01546	2e-116	-	-	-	S	-	-	-	peptidoglycan catabolic process
PMJDBAPL_01551	1.61e-75	-	-	-	-	-	-	-	-
PMJDBAPL_01552	2.23e-94	-	-	-	S	-	-	-	Metallo-beta-lactamase superfamily
PMJDBAPL_01553	4.45e-67	-	-	-	K	-	-	-	Psort location Cytoplasmic, score
PMJDBAPL_01554	2.92e-26	yjdF3	-	-	S	-	-	-	Protein of unknown function (DUF2992)
PMJDBAPL_01555	2.13e-111	tnpA1	-	-	L	-	-	-	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
PMJDBAPL_01556	0.0	lepA	-	-	M	ko:K03596	ko05134,map05134	ko00000,ko00001	Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
PMJDBAPL_01557	7.55e-265	dnaJ	-	-	O	ko:K03686	-	ko00000,ko03029,ko03110	ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
PMJDBAPL_01558	0.0	dnaK	-	-	O	ko:K04043	ko03018,ko04212,ko05152,map03018,map04212,map05152	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	Heat shock 70 kDa protein
PMJDBAPL_01559	2.32e-117	grpE	-	-	O	ko:K03687	-	ko00000,ko03029,ko03110	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
PMJDBAPL_01560	4.58e-247	hrcA	-	-	K	ko:K03705	-	ko00000,ko03000	Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
PMJDBAPL_01561	2.97e-83	-	-	-	-	-	-	-	-
PMJDBAPL_01562	2.2e-225	ribF	2.7.1.26, 2.7.7.2	-	H	ko:K11753	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Belongs to the ribF family
PMJDBAPL_01563	4.95e-215	truB	5.4.99.25	-	J	ko:K03177,ko:K03483	-	ko00000,ko01000,ko03000,ko03016	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
PMJDBAPL_01564	1.38e-77	rbfA	-	-	J	ko:K02834	-	ko00000,ko03009	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
PMJDBAPL_01565	0.0	infB	-	-	J	ko:K02519	-	ko00000,ko03012,ko03029	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
PMJDBAPL_01566	1.96e-65	ylxQ	-	-	J	-	-	-	ribosomal protein
PMJDBAPL_01567	1.2e-59	ylxR	-	-	K	ko:K07742	-	ko00000	Protein of unknown function (DUF448)
PMJDBAPL_01568	1.38e-273	nusA	-	-	K	ko:K02600	-	ko00000,ko03009,ko03021	Participates in both transcription termination and antitermination
PMJDBAPL_01569	6.36e-108	rimP	-	-	J	ko:K09748	-	ko00000,ko03009	Required for maturation of 30S ribosomal subunits
PMJDBAPL_01570	0.0	polC	2.7.7.7	-	L	ko:K03763	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PMJDBAPL_01571	0.0	proS	6.1.1.15	-	J	ko:K01881	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
PMJDBAPL_01572	8.1e-299	rseP	-	-	M	ko:K11749	ko02024,ko04112,map02024,map04112	ko00000,ko00001,ko01000,ko01002	zinc metalloprotease
PMJDBAPL_01573	8.28e-178	cdsA	2.7.7.41	-	I	ko:K00981	ko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070	ko00000,ko00001,ko00002,ko01000	Belongs to the CDS family
PMJDBAPL_01574	7.14e-178	uppS	2.5.1.31	-	H	ko:K00806	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
PMJDBAPL_01575	1.72e-122	frr	-	-	J	ko:K02838	-	ko00000,ko03012	Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
PMJDBAPL_01576	6.07e-165	pyrH	2.7.4.22	-	F	ko:K09903	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphorylation of UMP to UDP
PMJDBAPL_01577	1.28e-196	tsf	-	-	J	ko:K02357	-	ko00000,ko03012,ko03029	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
PMJDBAPL_01578	3.54e-184	rpsB	-	-	J	ko:K02967	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uS2 family
PMJDBAPL_01579	1.89e-229	ldhD	1.1.1.28	-	CH	ko:K03778	ko00620,ko01120,map00620,map01120	ko00000,ko00001,ko01000	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PMJDBAPL_01580	9.65e-65	yazA	-	-	L	ko:K07461	-	ko00000	GIY-YIG catalytic domain protein
PMJDBAPL_01581	2.92e-182	yabB	2.1.1.223	-	L	ko:K07461,ko:K15460	-	ko00000,ko01000,ko03016	Methyltransferase small domain
PMJDBAPL_01582	3.72e-152	plsC	2.3.1.51	-	I	ko:K00655	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Acyltransferase
PMJDBAPL_01583	1.6e-40	XK26_06720	-	-	S	ko:K09976	-	ko00000	Uncharacterised protein family (UPF0154)
PMJDBAPL_01584	2.6e-45	ynzC	-	-	S	-	-	-	UPF0291 protein
PMJDBAPL_01585	2.52e-148	lexA	3.4.21.88	-	K	ko:K01356	-	ko00000,ko00002,ko01000,ko01002,ko03400	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
PMJDBAPL_01586	5.8e-270	mvaS	2.3.3.10	-	I	ko:K01641	ko00072,ko00280,ko00650,ko00900,ko01100,ko01110,ko01130,map00072,map00280,map00650,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Hydroxymethylglutaryl-CoA synthase
PMJDBAPL_01587	9.84e-162	rnhA	3.1.26.4	-	L	ko:K03469	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PMJDBAPL_01589	2.65e-123	-	-	-	-	-	-	-	-
PMJDBAPL_01590	1.25e-119	apt	2.4.2.7	-	F	ko:K00759	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000,ko04147	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
PMJDBAPL_01591	0.0	recJ	-	-	L	ko:K07462	ko03410,ko03430,ko03440,map03410,map03430,map03440	ko00000,ko00001,ko01000,ko03400	Single-stranded-DNA-specific exonuclease RecJ
PMJDBAPL_01592	1.58e-199	fabG	1.1.1.100	-	S	ko:K00059,ko:K07124	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Belongs to the short-chain dehydrogenases reductases (SDR) family
PMJDBAPL_01593	2.39e-226	rnz	3.1.26.11	-	J	ko:K00784	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
PMJDBAPL_01594	0.0	obg	-	-	S	ko:K03979	-	ko00000,ko01000,ko03009	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
PMJDBAPL_01595	0.0	uvrC	-	-	L	ko:K03703	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
PMJDBAPL_01596	1.41e-19	-	-	-	-	-	-	-	-
PMJDBAPL_01597	1.11e-78	-	-	-	S	-	-	-	mazG nucleotide pyrophosphohydrolase
PMJDBAPL_01598	2.01e-139	engB	-	-	D	ko:K03978	-	ko00000,ko03036	Necessary for normal cell division and for the maintenance of normal septation
PMJDBAPL_01599	5.9e-297	clpX	-	-	O	ko:K03544	ko04112,map04112	ko00000,ko00001,ko03110	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
PMJDBAPL_01600	2.26e-302	tig	-	-	D	ko:K03545	-	ko00000	Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
PMJDBAPL_01601	4.94e-288	tuf	-	-	J	ko:K02358,ko:K15771	ko02010,map02010	ko00000,ko00001,ko00002,ko02000,ko03012,ko03029,ko04147	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
PMJDBAPL_01602	2.32e-204	-	-	-	S	-	-	-	Tetratricopeptide repeat
PMJDBAPL_01603	0.0	rnjB	-	-	J	ko:K12574	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PMJDBAPL_01604	1.74e-57	rpsO	-	-	J	ko:K02956	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
PMJDBAPL_01605	1.44e-47	rpsT	-	-	J	ko:K02968	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 16S ribosomal RNA
PMJDBAPL_01606	5.37e-192	holA	2.7.7.7	-	L	ko:K02340	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III delta subunit
PMJDBAPL_01607	0.0	comEC	-	-	S	ko:K02238	-	ko00000,ko00002,ko02044	Competence protein ComEC
PMJDBAPL_01608	3.52e-116	comEB	3.5.4.12	-	F	ko:K01493	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko02044	ComE operon protein 2
PMJDBAPL_01609	1.33e-135	comEA	-	-	L	ko:K02237	-	ko00000,ko00002,ko02044	Competence protein ComEA
PMJDBAPL_01610	3.14e-254	lon	-	-	T	ko:K07177	ko02024,map02024	ko00000,ko00001,ko01002	Belongs to the peptidase S16 family
PMJDBAPL_01611	3.05e-116	coaD	2.7.7.3	-	H	ko:K00954	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
PMJDBAPL_01612	2.37e-129	rsmD	2.1.1.171	-	L	ko:K08316	-	ko00000,ko01000,ko03009	RNA methyltransferase, RsmD family
PMJDBAPL_01613	6.37e-60	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2129)
PMJDBAPL_01614	7.54e-284	ftsW	-	-	D	ko:K03588	ko04112,map04112	ko00000,ko00001,ko02000,ko03036	Belongs to the SEDS family
PMJDBAPL_01615	0.0	typA	-	-	T	ko:K06207	-	ko00000	GTP-binding protein TypA
PMJDBAPL_01616	4.1e-176	suhB	3.1.3.25	-	G	ko:K01092	ko00521,ko00562,ko01100,ko04070,map00521,map00562,map01100,map04070	ko00000,ko00001,ko00002,ko01000	Belongs to the inositol monophosphatase superfamily
PMJDBAPL_01617	7.04e-63	yktA	-	-	S	-	-	-	Belongs to the UPF0223 family
PMJDBAPL_01618	0.0	pdhD	1.8.1.4	-	C	ko:K00382	ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000,ko04147	Dehydrogenase
PMJDBAPL_01619	3.96e-309	pdhC	2.3.1.12	-	C	ko:K00627	ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
PMJDBAPL_01620	9.42e-232	pdhB	1.2.4.1	-	C	ko:K00162	ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04922,ko05230,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200,map04066,map04922,map05230	br01601,ko00000,ko00001,ko00002,ko01000	Transketolase, C-terminal domain protein
PMJDBAPL_01621	1.16e-265	pdhA	1.2.4.1	-	C	ko:K00161	ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04922,ko05230,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200,map04066,map04922,map05230	br01601,ko00000,ko00001,ko00002,ko01000	Dehydrogenase E1 component
PMJDBAPL_01622	2.38e-133	def	3.5.1.88	-	J	ko:K01462	-	ko00000,ko01000	Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
PMJDBAPL_01623	3.66e-103	-	-	-	-	-	-	-	-
PMJDBAPL_01624	9.99e-44	ykzG	-	-	S	-	-	-	Belongs to the UPF0356 family
PMJDBAPL_01625	3.55e-231	-	-	-	I	-	-	-	Diacylglycerol kinase catalytic
PMJDBAPL_01626	4.37e-39	-	-	-	-	-	-	-	-
PMJDBAPL_01627	9.34e-223	-	-	-	M	ko:K21471	-	ko00000,ko01000,ko01002,ko01011	NlpC P60 family protein
PMJDBAPL_01629	1.25e-74	-	-	-	-	-	-	-	-
PMJDBAPL_01630	1.52e-264	glxK	2.7.1.165	-	G	ko:K00865	ko00260,ko00561,ko00630,ko01100,ko01120,ko01130,map00260,map00561,map00630,map01100,map01120,map01130	ko00000,ko00001,ko01000	Belongs to the glycerate kinase type-1 family
PMJDBAPL_01631	1.49e-253	asd	1.2.1.11	-	E	ko:K00133	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
PMJDBAPL_01632	1.69e-278	aspC	-	-	E	ko:K00841	ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase
PMJDBAPL_01633	3.82e-182	dapB	1.17.1.8	-	E	ko:K00215	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
PMJDBAPL_01634	1.96e-224	dapA	4.3.3.7	-	E	ko:K01714	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
PMJDBAPL_01635	3.17e-281	hipO	3.5.1.47	-	E	ko:K05823	ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000,ko01002	Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
PMJDBAPL_01636	2.66e-111	dapH	2.3.1.117, 2.3.1.89	-	E	ko:K00674,ko:K05822	ko00300,ko01100,ko01110,ko01120,ko01230,map00300,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
PMJDBAPL_01637	0.0	lysA	4.1.1.20	-	E	ko:K01586	ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
PMJDBAPL_01638	0.0	lysC	2.7.2.4	-	E	ko:K00928	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the aspartokinase family
PMJDBAPL_01639	1.03e-239	dapF	5.1.1.7	-	E	ko:K01778	ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
PMJDBAPL_01640	4.96e-222	prs2	2.7.6.1	-	F	ko:K00948	ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PMJDBAPL_01641	0.0	recD2	3.1.11.5	-	L	ko:K03581	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
PMJDBAPL_01642	3.82e-157	-	-	-	S	-	-	-	repeat protein
PMJDBAPL_01643	4.02e-159	pgm6	-	-	G	-	-	-	phosphoglycerate mutase
PMJDBAPL_01644	2.15e-286	mnmA	2.8.1.13	-	J	ko:K00566	ko04122,map04122	ko00000,ko00001,ko01000,ko03016	Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
PMJDBAPL_01645	2.27e-75	XK27_04120	-	-	S	-	-	-	Putative amino acid metabolism
PMJDBAPL_01646	1.1e-278	iscS	2.8.1.7	-	E	ko:K04487	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko02048,ko03016,ko03029	Aminotransferase class V
PMJDBAPL_01647	3.97e-161	mtnN	3.2.2.9	-	E	ko:K01243	ko00270,ko01100,ko01230,map00270,map01100,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
PMJDBAPL_01648	3.63e-32	-	-	-	-	-	-	-	-
PMJDBAPL_01649	1.44e-128	nudF	3.6.1.13	-	L	ko:K01515	ko00230,map00230	ko00000,ko00001,ko01000	ADP-ribose pyrophosphatase
PMJDBAPL_01650	5.69e-44	cspB	-	-	K	ko:K03704	-	ko00000,ko03000	Cold shock protein
PMJDBAPL_01651	0.0	ileS	6.1.1.5	-	J	ko:K01870	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
PMJDBAPL_01652	3.71e-109	divIVA	-	-	D	ko:K04074	-	ko00000,ko03036	DivIVA domain protein
PMJDBAPL_01653	1.06e-189	ylmH	-	-	S	-	-	-	S4 domain protein
PMJDBAPL_01654	3.2e-54	ylmG	-	-	S	ko:K02221	-	ko00000,ko02044	YGGT family
PMJDBAPL_01655	1.11e-92	sepF	-	-	D	ko:K09772	-	ko00000,ko03036	Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
PMJDBAPL_01656	9.27e-289	ftsZ	-	-	D	ko:K03531	ko04112,map04112	ko00000,ko00001,ko02048,ko03036,ko04812	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
PMJDBAPL_01657	0.0	ftsA	-	-	D	ko:K03590	ko04112,map04112	ko00000,ko00001,ko03036,ko04812	Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
PMJDBAPL_01658	7.33e-187	divIB	-	-	D	ko:K03589	ko04112,map04112	ko00000,ko00001,ko03036	Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
PMJDBAPL_01659	1.7e-259	murG	2.4.1.227	GT28	M	ko:K02563	ko00550,ko01100,ko01502,ko04112,map00550,map01100,map01502,map04112	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
PMJDBAPL_01660	0.0	murD	6.3.2.9	-	M	ko:K01925	ko00471,ko00550,ko01100,map00471,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
PMJDBAPL_01661	7.41e-228	mraY	2.7.8.13	-	M	ko:K01000	ko00550,ko01100,ko01502,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
PMJDBAPL_01662	0.0	pbpX	-	-	M	ko:K08724,ko:K12552,ko:K12556	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01011	Penicillin-binding Protein
PMJDBAPL_01663	5.99e-74	ftsL	-	-	D	-	-	-	Cell division protein FtsL
PMJDBAPL_01664	1.32e-223	rsmH	2.1.1.199	-	J	ko:K03438	-	ko00000,ko01000,ko03009	Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
PMJDBAPL_01665	1.5e-101	mraZ	-	-	K	ko:K03925	-	ko00000	Belongs to the MraZ family
PMJDBAPL_01666	5.38e-169	-	-	-	L	-	-	-	Transposase
PMJDBAPL_01667	0.0	-	-	-	O	-	-	-	Arylsulfotransferase (ASST)
PMJDBAPL_01668	8.51e-306	tyrS	6.1.1.1	-	J	ko:K01866	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
PMJDBAPL_01669	2.88e-229	-	-	-	-	-	-	-	-
PMJDBAPL_01670	5.27e-169	gpmA	5.4.2.11	-	G	ko:K01834	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PMJDBAPL_01671	4.09e-310	purD	6.3.4.13	-	F	ko:K01945	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the GARS family
PMJDBAPL_01672	0.0	purH	2.1.2.3, 3.5.4.10	-	F	ko:K00602	ko00230,ko00670,ko01100,ko01110,ko01130,ko01523,map00230,map00670,map01100,map01110,map01130,map01523	ko00000,ko00001,ko00002,ko01000,ko04147	Bifunctional purine biosynthesis protein PurH
PMJDBAPL_01673	5.82e-136	purN	2.1.2.2	-	F	ko:K11175	ko00230,ko00670,ko01100,ko01110,ko01130,map00230,map00670,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
PMJDBAPL_01674	3.11e-247	purM	6.3.3.1	-	F	ko:K01933	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Phosphoribosylformylglycinamidine cyclo-ligase
PMJDBAPL_01675	0.0	purF	2.4.2.14	-	F	ko:K00764	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko01002	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
PMJDBAPL_01676	0.0	purL	6.3.5.3	-	F	ko:K01952	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PMJDBAPL_01677	3.16e-160	purQ	6.3.5.3	-	F	ko:K01952	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PMJDBAPL_01678	2.15e-48	purS	6.3.5.3	-	F	ko:K01952	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PMJDBAPL_01679	4.3e-169	purC	6.3.2.6	-	F	ko:K01923	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the SAICAR synthetase family
PMJDBAPL_01680	0.0	purB	4.3.2.2	-	F	ko:K01756	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
PMJDBAPL_01681	1.5e-276	purK	6.3.4.18	-	F	ko:K01589	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
PMJDBAPL_01682	2.11e-108	purE	5.4.99.18	-	F	ko:K01588	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
PMJDBAPL_01683	5.83e-162	budA	4.1.1.5	-	H	ko:K01575	ko00650,ko00660,map00650,map00660	ko00000,ko00001,ko01000	Belongs to the alpha-acetolactate decarboxylase family
PMJDBAPL_01684	0.0	alsS	2.2.1.6	-	EH	ko:K01652	ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the TPP enzyme family
PMJDBAPL_01685	0.0	fhs	6.3.4.3	-	F	ko:K01938	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Belongs to the formate--tetrahydrofolate ligase family
PMJDBAPL_01686	6.76e-227	ydbI	-	-	K	-	-	-	AI-2E family transporter
PMJDBAPL_01687	2.33e-291	cfa	2.1.1.79	-	M	ko:K00574	-	ko00000,ko01000	cyclopropane-fatty-acyl-phospholipid synthase
PMJDBAPL_01688	4.32e-147	-	-	-	S	-	-	-	Haloacid dehalogenase-like hydrolase
PMJDBAPL_01689	9.09e-149	pyrE	2.4.2.10	-	F	ko:K00762	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
PMJDBAPL_01690	1.96e-167	pyrF	4.1.1.23	-	F	ko:K01591	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
PMJDBAPL_01691	1.95e-220	pyrD	1.3.1.14, 1.3.98.1	-	F	ko:K00226,ko:K17828	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
PMJDBAPL_01692	1.38e-309	pyrC	3.5.2.3	-	F	ko:K01465	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
PMJDBAPL_01693	2.57e-221	pyrB	2.1.3.2	-	F	ko:K00609	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the ATCase OTCase family
PMJDBAPL_01694	9.28e-176	-	-	-	K	-	-	-	LysR substrate binding domain
PMJDBAPL_01695	2.01e-70	-	-	-	S	-	-	-	branched-chain amino acid
PMJDBAPL_01696	3.79e-183	-	-	-	E	-	-	-	AzlC protein
PMJDBAPL_01697	3.73e-264	hpk31	-	-	T	-	-	-	Histidine kinase
PMJDBAPL_01698	9.76e-161	vanR	-	-	K	-	-	-	response regulator
PMJDBAPL_01699	2e-263	guaB	1.1.1.205	-	F	ko:K00088	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
PMJDBAPL_01700	2.18e-218	deoR	-	-	K	ko:K05346	-	ko00000,ko03000	sugar-binding domain protein
PMJDBAPL_01701	3.27e-167	deoD	2.4.2.1	-	F	ko:K03784	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	Purine nucleoside phosphorylase
PMJDBAPL_01702	3.48e-304	pdp	2.4.2.2	-	F	ko:K00756	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	pyrimidine-nucleoside phosphorylase
PMJDBAPL_01703	6.87e-300	deoB	5.4.2.7	-	G	ko:K01839	ko00030,ko00230,map00030,map00230	ko00000,ko00001,ko01000	Phosphotransfer between the C1 and C5 carbon atoms of pentose
PMJDBAPL_01704	9.74e-154	deoC	4.1.2.4	-	F	ko:K01619	ko00030,map00030	ko00000,ko00001,ko01000	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
PMJDBAPL_01705	1.04e-173	-	-	-	S	-	-	-	Protein of unknown function (DUF1129)
PMJDBAPL_01706	6.1e-255	ychF	-	-	J	ko:K06942	-	ko00000,ko03009	ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
PMJDBAPL_01707	5.8e-43	yyzM	-	-	S	-	-	-	Bacterial protein of unknown function (DUF951)
PMJDBAPL_01708	4.83e-198	spo0J	-	-	K	ko:K03497	-	ko00000,ko03000,ko03036,ko04812	Belongs to the ParB family
PMJDBAPL_01709	2.79e-178	soj	-	-	D	ko:K03496	-	ko00000,ko03036,ko04812	Sporulation initiation inhibitor
PMJDBAPL_01710	1.3e-200	noc	-	-	K	ko:K03497	-	ko00000,ko03000,ko03036,ko04812	Belongs to the ParB family
PMJDBAPL_01711	5.39e-164	rsmG	2.1.1.170	-	J	ko:K03501	-	ko00000,ko01000,ko03009,ko03036	Specifically methylates the N7 position of a guanine in 16S rRNA
PMJDBAPL_01712	5.97e-208	-	1.1.1.157	-	I	ko:K00074	ko00360,ko00362,ko00650,ko01100,ko01120,map00360,map00362,map00650,map01100,map01120	ko00000,ko00001,ko01000	3-hydroxyacyl-CoA dehydrogenase
PMJDBAPL_01713	2.03e-219	rihA	3.2.2.1	-	F	ko:K01239,ko:K01250,ko:K12700	ko00230,ko00760,ko01100,map00230,map00760,map01100	ko00000,ko00001,ko01000	Nucleoside
PMJDBAPL_01714	3.98e-277	nupG	-	-	F	ko:K03317,ko:K11535,ko:K16323	-	ko00000,ko02000	Nucleoside transporter
PMJDBAPL_01715	2.15e-286	aapA	-	-	E	ko:K03293,ko:K11737	-	ko00000,ko02000	Amino acid permease
PMJDBAPL_01716	5.67e-178	glnQ	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
PMJDBAPL_01717	0.0	glnP	-	-	P	ko:K02029,ko:K02030,ko:K10036	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
PMJDBAPL_01718	0.0	serS	6.1.1.11	-	J	ko:K01875	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
PMJDBAPL_01719	0.0	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
PMJDBAPL_01720	1.55e-84	-	-	-	M	-	-	-	Rib/alpha-like repeat
PMJDBAPL_01721	1.38e-195	-	-	-	J	-	-	-	Methyltransferase
PMJDBAPL_01722	2.02e-62	udp	2.4.2.3	-	F	ko:K00757	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	Phosphorylase superfamily
PMJDBAPL_01723	1.38e-28	pnuC	-	-	H	ko:K03811	-	ko00000,ko02000	nicotinamide mononucleotide transporter
PMJDBAPL_01724	4.85e-74	pnuC	-	-	H	ko:K03811	-	ko00000,ko02000	nicotinamide mononucleotide transporter
PMJDBAPL_01725	3.62e-62	deoB	5.4.2.7	-	G	ko:K01839	ko00030,ko00230,map00030,map00230	ko00000,ko00001,ko01000	Phosphotransfer between the C1 and C5 carbon atoms of pentose
PMJDBAPL_01726	1.29e-204	deoB	5.4.2.7	-	G	ko:K01839	ko00030,ko00230,map00030,map00230	ko00000,ko00001,ko01000	Phosphotransfer between the C1 and C5 carbon atoms of pentose
PMJDBAPL_01727	2.09e-130	ywlG	-	-	S	-	-	-	Belongs to the UPF0340 family
PMJDBAPL_01728	4.84e-71	-	-	-	S	-	-	-	ParE toxin of type II toxin-antitoxin system, parDE
PMJDBAPL_01729	6.25e-47	-	-	-	D	-	-	-	Antitoxin component of a toxin-antitoxin (TA) module
PMJDBAPL_01730	2.98e-252	-	-	-	EGP	-	-	-	Major Facilitator
PMJDBAPL_01731	4.73e-160	-	-	-	M	-	-	-	Lysin motif
PMJDBAPL_01732	1.91e-103	-	-	-	-	-	-	-	-
PMJDBAPL_01733	5.36e-218	-	-	-	P	ko:K03284	-	ko00000,ko02000	CorA-like Mg2+ transporter protein
PMJDBAPL_01734	1.25e-124	-	-	-	K	-	-	-	PFAM GCN5-related N-acetyltransferase
PMJDBAPL_01735	7.27e-266	thiP	-	-	U	-	-	-	Belongs to the purine-cytosine permease (2.A.39) family
PMJDBAPL_01736	3.7e-19	-	-	-	-	-	-	-	-
PMJDBAPL_01737	4.44e-117	-	-	-	S	-	-	-	Domain of unknown function (DUF4767)
PMJDBAPL_01738	7.35e-249	-	1.1.1.1	-	E	ko:K00001	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	alcohol dehydrogenase
PMJDBAPL_01739	3.45e-144	-	-	-	S	-	-	-	Membrane
PMJDBAPL_01740	1.28e-160	-	-	-	O	-	-	-	Zinc-dependent metalloprotease
PMJDBAPL_01741	9.38e-115	luxS	4.4.1.21	-	H	ko:K07173	ko00270,ko01100,ko01230,ko02024,ko02026,ko05111,map00270,map01100,map01230,map02024,map02026,map05111	ko00000,ko00001,ko00002,ko01000	Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
PMJDBAPL_01742	1.84e-203	metQ1	-	-	P	ko:K02073	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the nlpA lipoprotein family
PMJDBAPL_01744	0.0	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
PMJDBAPL_01745	0.0	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
PMJDBAPL_01746	0.0	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
PMJDBAPL_01747	3.47e-233	-	-	-	S	ko:K07035	-	ko00000	Phosphotransferase system, EIIC
PMJDBAPL_01748	4.8e-128	efp	-	-	J	ko:K02356	-	ko00000,ko03012	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
PMJDBAPL_01749	1.18e-221	-	-	-	-	-	-	-	-
PMJDBAPL_01751	2.48e-32	ptpA	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
PMJDBAPL_01752	3.3e-31	ptpA	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
PMJDBAPL_01753	2.61e-123	-	-	-	K	-	-	-	acetyltransferase
PMJDBAPL_01754	6.33e-28	-	-	-	-	-	-	-	-
PMJDBAPL_01755	5.55e-41	-	-	-	-	-	-	-	-
PMJDBAPL_01756	3.65e-46	-	-	-	-	-	-	-	-
PMJDBAPL_01758	1.06e-276	amt	-	-	P	ko:K03320	-	ko00000,ko02000	ammonium transporter
PMJDBAPL_01759	4.9e-126	-	-	-	S	-	-	-	AmiS/UreI family transporter
PMJDBAPL_01760	3.71e-64	ureA	3.5.1.5	-	E	ko:K01430	ko00220,ko00230,ko00791,ko01100,ko01120,map00220,map00230,map00791,map01100,map01120	ko00000,ko00001,ko01000	Urease, gamma subunit
PMJDBAPL_01761	6.94e-92	ureB	3.5.1.5	-	E	ko:K01429	ko00220,ko00230,ko00791,ko01100,ko01120,map00220,map00230,map00791,map01100,map01120	ko00000,ko00001,ko01000	Urease beta subunit
PMJDBAPL_01762	0.0	ureC	3.5.1.5	-	E	ko:K01428	ko00220,ko00230,ko00791,ko01100,ko01120,ko05120,map00220,map00230,map00791,map01100,map01120,map05120	ko00000,ko00001,ko01000	Amidohydrolase family
PMJDBAPL_01763	6.23e-102	ureE	-	-	O	ko:K03187	-	ko00000	Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly
PMJDBAPL_01764	1.45e-170	ureF	-	-	O	ko:K03188	-	ko00000	Required for maturation of urease via the functional incorporation of the urease nickel metallocenter
PMJDBAPL_01765	2.42e-146	ureG	-	-	KO	ko:K03189	-	ko00000	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
PMJDBAPL_01766	4.23e-212	ureD	-	-	O	ko:K03190	-	ko00000	Required for maturation of urease via the functional incorporation of the urease nickel metallocenter
PMJDBAPL_01767	1.29e-235	cbiM	-	-	P	ko:K02007	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	PDGLE domain
PMJDBAPL_01768	7.02e-185	-	-	-	P	ko:K02008	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Cobalt transport protein
PMJDBAPL_01769	6.63e-174	-	-	-	P	ko:K02006	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
PMJDBAPL_01770	7.17e-171	-	-	-	K	ko:K07658	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	Transcriptional regulatory protein, C-terminal domain protein
PMJDBAPL_01771	1.91e-202	pstS	-	-	P	ko:K02040	ko02010,ko02020,ko05152,map02010,map02020,map05152	ko00000,ko00001,ko00002,ko02000	Phosphate
PMJDBAPL_01772	3.23e-194	pstC	-	-	P	ko:K02037	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	probably responsible for the translocation of the substrate across the membrane
PMJDBAPL_01773	7.4e-197	pstA	-	-	P	ko:K02038	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Phosphate transport system permease protein PstA
PMJDBAPL_01774	4.47e-177	pstB	3.6.3.27	-	P	ko:K02036	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PMJDBAPL_01775	2.89e-160	phoU	-	-	P	ko:K02039	-	ko00000	Plays a role in the regulation of phosphate uptake
PMJDBAPL_01776	6.7e-185	-	-	-	-	-	-	-	-
PMJDBAPL_01778	1.01e-309	-	-	-	M	-	-	-	Glycosyl transferase
PMJDBAPL_01779	4.71e-287	-	-	-	G	-	-	-	Glycosyl hydrolases family 8
PMJDBAPL_01780	2.09e-145	nfrA	1.5.1.38	-	C	ko:K19285	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	nitroreductase
PMJDBAPL_01781	0.0	mycA	4.2.1.53	-	S	ko:K10254	-	ko00000,ko01000	Myosin-crossreactive antigen
PMJDBAPL_01782	3.21e-303	ktrB	-	-	P	ko:K03498	-	ko00000,ko02000	Potassium uptake protein
PMJDBAPL_01783	2.8e-152	ktrA	-	-	P	ko:K03499	-	ko00000,ko02000	domain protein
PMJDBAPL_01784	1.07e-110	-	-	-	Q	-	-	-	Methyltransferase
PMJDBAPL_01785	4.64e-294	mntH	-	-	P	ko:K03322	-	ko00000,ko02000	H( )-stimulated, divalent metal cation uptake system
PMJDBAPL_01786	3.14e-227	hemH	4.99.1.1, 4.99.1.9	-	H	ko:K01772	ko00860,ko01100,ko01110,map00860,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the ferrous insertion into protoporphyrin IX
PMJDBAPL_01787	1.47e-213	mccA	2.5.1.134, 2.5.1.47	-	E	ko:K01738,ko:K17216	ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the cysteine synthase cystathionine beta- synthase family
PMJDBAPL_01788	7.93e-110	-	-	-	S	-	-	-	NADPH-dependent FMN reductase
PMJDBAPL_01789	1.1e-218	-	-	-	S	-	-	-	Conserved hypothetical protein 698
PMJDBAPL_01790	5.33e-210	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
PMJDBAPL_01791	4.42e-141	-	-	-	I	-	-	-	alpha/beta hydrolase fold
PMJDBAPL_01792	1.62e-159	yjcA	-	-	S	ko:K19350	ko02010,map02010	ko00000,ko00001,ko01504,ko02000	ABC transporter
PMJDBAPL_01793	1.54e-220	ywbN	-	-	P	ko:K07223,ko:K16301	-	ko00000,ko01000,ko02000	Peroxidase
PMJDBAPL_01794	1.15e-190	arcD	-	-	S	-	-	-	C4-dicarboxylate anaerobic carrier
PMJDBAPL_01795	5.18e-121	arcD	-	-	S	-	-	-	C4-dicarboxylate anaerobic carrier
PMJDBAPL_01796	0.0	arcT	-	-	E	-	-	-	Dipeptidase
PMJDBAPL_01797	7.06e-272	-	-	-	EGP	-	-	-	Transporter, major facilitator family protein
PMJDBAPL_01798	0.0	gtfA	2.4.1.7	GH13	G	ko:K00690	ko00500,map00500	ko00000,ko00001,ko01000	Sucrose glucosyltransferase
PMJDBAPL_01799	5.58e-178	-	-	-	V	-	-	-	Beta-lactamase enzyme family
PMJDBAPL_01800	1.73e-288	dacA	3.4.16.4	-	M	ko:K07258	ko00550,ko01100,map00550,map01100	ko00000,ko00001,ko01000,ko01002,ko01011	Belongs to the peptidase S11 family
PMJDBAPL_01801	6.26e-96	-	-	-	-	-	-	-	-
PMJDBAPL_01802	2.03e-39	-	-	-	L	ko:K07491	-	ko00000	PFAM transposase IS200-family protein
PMJDBAPL_01803	9.74e-311	lmrB	-	-	U	ko:K18926	-	ko00000,ko00002,ko02000	Belongs to the major facilitator superfamily
PMJDBAPL_01804	0.0	nrdD	1.1.98.6	-	F	ko:K21636	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Ribonucleoside-triphosphate reductase
PMJDBAPL_01805	9.29e-143	nrdG	1.97.1.4	-	O	ko:K04068	-	ko00000,ko01000	Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PMJDBAPL_01806	4.14e-200	-	-	-	O	-	-	-	Uncharacterized protein family (UPF0051)
PMJDBAPL_01807	3.49e-151	-	-	-	M	-	-	-	LysM domain protein
PMJDBAPL_01808	0.0	-	-	-	EP	-	-	-	Psort location Cytoplasmic, score
PMJDBAPL_01809	7.92e-138	-	-	-	M	-	-	-	LysM domain protein
PMJDBAPL_01810	1.99e-190	exoA	3.1.11.2	-	L	ko:K01142	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	exodeoxyribonuclease III
PMJDBAPL_01811	2.18e-184	-	1.3.1.1	-	C	ko:K17723	ko00240,ko00410,ko00770,ko01100,map00240,map00410,map00770,map01100	ko00000,ko00001,ko00002,ko01000	4Fe-4S dicluster domain
PMJDBAPL_01812	7.14e-194	yeaE	-	-	S	-	-	-	Aldo keto
PMJDBAPL_01813	3.81e-100	hsp	-	-	O	ko:K13993	ko04141,map04141	ko00000,ko00001,ko03110	Belongs to the small heat shock protein (HSP20) family
PMJDBAPL_01814	0.0	umuC	-	-	L	ko:K03502	-	ko00000,ko03400	impB/mucB/samB family C-terminal domain
PMJDBAPL_01815	4.58e-103	-	-	-	S	-	-	-	Psort location Cytoplasmic, score
PMJDBAPL_01816	4.13e-110	-	-	-	S	-	-	-	Short repeat of unknown function (DUF308)
PMJDBAPL_01817	7.03e-33	-	-	-	-	-	-	-	-
PMJDBAPL_01818	8.28e-135	-	-	-	V	-	-	-	VanZ like family
PMJDBAPL_01819	1.58e-299	cycA	-	-	E	ko:K03293,ko:K11737	-	ko00000,ko02000	Amino acid permease
PMJDBAPL_01820	3.59e-111	perR	-	-	P	ko:K03711,ko:K09825	-	ko00000,ko03000	Belongs to the Fur family
PMJDBAPL_01821	0.0	-	-	-	EGP	-	-	-	Major Facilitator
PMJDBAPL_01822	5.66e-124	tag1	3.2.2.20	-	L	ko:K01246	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	glycosylase
PMJDBAPL_01823	1.75e-276	metK	2.5.1.6	-	H	ko:K00789	ko00270,ko01100,ko01110,ko01230,map00270,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
PMJDBAPL_01824	0.0	leuS	6.1.1.4	-	J	ko:K01869	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Belongs to the class-I aminoacyl-tRNA synthetase family
PMJDBAPL_01825	2.07e-55	-	-	-	-	-	-	-	-
PMJDBAPL_01826	0.0	ytgP	-	-	S	ko:K03328	-	ko00000	Polysaccharide biosynthesis protein
PMJDBAPL_01827	3.39e-194	nnrD	4.2.1.136, 5.1.99.6	-	H	ko:K17758,ko:K17759	-	ko00000,ko01000	Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
PMJDBAPL_01828	0.0	pepV	3.5.1.18	-	E	ko:K01270,ko:K01274,ko:K01439	ko00300,ko00480,ko01100,ko01120,ko01230,map00300,map00480,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000,ko01002	dipeptidase PepV
PMJDBAPL_01829	4.4e-112	-	-	-	T	-	-	-	Belongs to the universal stress protein A family
PMJDBAPL_01830	2.05e-220	-	-	-	NU	-	-	-	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
PMJDBAPL_01831	3.06e-150	dgk2	-	-	F	-	-	-	deoxynucleoside kinase
PMJDBAPL_01832	1.53e-146	-	-	-	-	-	-	-	-
PMJDBAPL_01833	7.22e-238	rbsR	-	-	K	ko:K02529	-	ko00000,ko03000	Periplasmic binding proteins and sugar binding domain of LacI family
PMJDBAPL_01834	1.9e-206	rbsK	2.7.1.15	-	H	ko:K00852	ko00030,map00030	ko00000,ko00001,ko01000	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PMJDBAPL_01835	1.52e-43	-	-	-	-	-	-	-	-
PMJDBAPL_01836	4.11e-151	XK27_07085	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
PMJDBAPL_01837	3.74e-58	-	-	-	-	-	-	-	-
PMJDBAPL_01839	1.81e-90	-	-	-	-	-	-	-	-
PMJDBAPL_01840	2.89e-73	folB	1.13.11.81, 4.1.2.25, 5.1.99.8	-	H	ko:K01633	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
PMJDBAPL_01841	7.25e-118	folK	2.7.6.3	-	H	ko:K00950	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
PMJDBAPL_01842	1.17e-136	folE	2.7.6.3, 3.5.4.16	-	F	ko:K00950,ko:K01495	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	GTP cyclohydrolase 1
PMJDBAPL_01843	2.29e-291	folC	6.3.2.12, 6.3.2.17	-	H	ko:K11754	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the folylpolyglutamate synthase family
PMJDBAPL_01844	4.74e-133	folQ	3.6.1.66	-	F	ko:K02428	ko00230,map00230	ko00000,ko00001,ko01000	Ham1 family
PMJDBAPL_01845	1.01e-271	folP	2.5.1.15	-	H	ko:K00796	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	dihydropteroate synthase
PMJDBAPL_01846	5.38e-60	-	-	-	-	-	-	-	-
PMJDBAPL_01847	1.49e-54	-	-	-	-	-	-	-	-
PMJDBAPL_01849	3.33e-214	ldh	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	Belongs to the LDH MDH superfamily. LDH family
PMJDBAPL_01850	7.18e-193	thiD	2.7.1.49, 2.7.4.7	-	H	ko:K00941	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Phosphomethylpyrimidine kinase
PMJDBAPL_01851	0.0	argS	6.1.1.19	-	J	ko:K01887	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Arginyl-tRNA synthetase
PMJDBAPL_01852	0.0	pbp2A	2.4.1.129, 3.4.16.4	GT51	M	ko:K12555	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01003,ko01011	penicillin-binding protein
PMJDBAPL_01853	2.42e-64	yheA	-	-	S	-	-	-	Belongs to the UPF0342 family
PMJDBAPL_01854	8.98e-274	yhaO	-	-	L	ko:K03547	-	ko00000,ko03400	Ser Thr phosphatase family protein
PMJDBAPL_01855	0.0	yhaN	-	-	L	-	-	-	AAA domain
PMJDBAPL_01856	3.96e-178	prsA	5.2.1.8	-	M	ko:K07533	-	ko00000,ko01000,ko03110	Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
PMJDBAPL_01858	1.49e-102	hit	-	-	FG	ko:K02503	-	ko00000,ko04147	histidine triad
PMJDBAPL_01859	1.05e-172	ecsA	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PMJDBAPL_01860	3.02e-275	ecsB	-	-	U	ko:K01992	-	ko00000,ko00002,ko02000	ABC transporter
PMJDBAPL_01861	3.07e-156	trmB	2.1.1.33	-	J	ko:K03439	-	ko00000,ko01000,ko03016	Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
PMJDBAPL_01867	7.98e-253	pgl	3.1.1.31	-	G	ko:K07404	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Lactonase, 7-bladed beta-propeller
PMJDBAPL_01868	3.32e-205	rrmA	2.1.1.187	-	H	ko:K00563,ko:K10947	-	ko00000,ko01000,ko03000,ko03009	Methyltransferase
PMJDBAPL_01869	1.26e-122	cspR	2.1.1.207	-	J	ko:K03216	-	ko00000,ko01000,ko03016	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
PMJDBAPL_01870	0.0	ftsK	-	-	D	ko:K03466	-	ko00000,ko03036	Belongs to the FtsK SpoIIIE SftA family
PMJDBAPL_01871	4.47e-16	-	-	-	S	-	-	-	Protein of unknown function (DUF4044)
PMJDBAPL_01872	4e-76	-	-	-	-	-	-	-	-
PMJDBAPL_01873	7.32e-62	-	-	-	L	ko:K07491	-	ko00000	PFAM transposase IS200-family protein
PMJDBAPL_01874	5.87e-51	pspC	-	-	KT	ko:K03973	-	ko00000,ko02048,ko03000	PspC domain protein
PMJDBAPL_01875	8.7e-123	-	-	-	K	-	-	-	Transcriptional regulator (TetR family)
PMJDBAPL_01876	0.0	yhgE	-	-	V	ko:K01421	-	ko00000	domain protein
PMJDBAPL_01877	4.46e-230	-	1.1.1.28	-	CH	ko:K03778	ko00620,ko01120,map00620,map01120	ko00000,ko00001,ko01000	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PMJDBAPL_01878	6.08e-13	-	-	-	S	-	-	-	CsbD-like
PMJDBAPL_01879	1.34e-47	-	-	-	S	-	-	-	Transglycosylase associated protein
PMJDBAPL_01880	5.29e-300	hflX	-	-	S	ko:K03665	-	ko00000,ko03009	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
PMJDBAPL_01881	4.71e-162	pgm3	-	-	G	-	-	-	phosphoglycerate mutase
PMJDBAPL_01882	1.14e-148	-	-	-	S	ko:K03975	-	ko00000	SNARE associated Golgi protein
PMJDBAPL_01883	0.0	helD	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	DNA helicase
PMJDBAPL_01884	8.06e-313	nox	1.6.3.4	-	C	ko:K17869	-	ko00000,ko01000	NADH oxidase
PMJDBAPL_01885	0.0	nox	1.6.3.4	-	C	ko:K17869	-	ko00000,ko01000	NADH oxidase
PMJDBAPL_01886	9.14e-205	-	-	-	EG	-	-	-	EamA-like transporter family
PMJDBAPL_01887	0.0	ltaS	2.7.8.20	-	M	ko:K19005	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
PMJDBAPL_01888	7.13e-227	coaA	2.7.1.33	-	F	ko:K00867	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Pantothenic acid kinase
PMJDBAPL_01889	1.72e-288	-	-	-	S	ko:K07133	-	ko00000	cog cog1373
PMJDBAPL_01891	0.0	guaA	6.3.5.2	-	F	ko:K01951	ko00230,ko00983,ko01100,map00230,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko01002	Catalyzes the synthesis of GMP from XMP
PMJDBAPL_01892	2.86e-113	tpx	1.11.1.15	-	O	ko:K11065	-	ko00000,ko01000	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
PMJDBAPL_01893	3.55e-313	-	1.8.1.7	-	C	ko:K00383	ko00480,ko04918,map00480,map04918	ko00000,ko00001,ko01000	pyridine nucleotide-disulfide oxidoreductase
PMJDBAPL_01894	1.1e-116	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
PMJDBAPL_01896	6.57e-63	-	-	-	-	-	-	-	-
PMJDBAPL_01897	4.16e-198	-	-	-	V	ko:K11050	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
PMJDBAPL_01898	8.27e-189	cylB	-	-	V	ko:K11051	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC-2 type transporter
PMJDBAPL_01899	8.81e-98	-	-	-	K	-	-	-	LytTr DNA-binding domain
PMJDBAPL_01900	6.61e-78	-	-	-	S	-	-	-	Protein of unknown function (DUF3021)
PMJDBAPL_01902	4.91e-221	-	-	-	L	-	-	-	Plasmid pRiA4b ORF-3-like protein
PMJDBAPL_01903	7.07e-21	-	-	-	S	-	-	-	Flavodoxin-like fold
PMJDBAPL_01904	2.52e-42	-	-	-	S	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 family transporter protein
PMJDBAPL_01905	2.28e-31	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PMJDBAPL_01906	8.38e-37	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PMJDBAPL_01907	5.67e-70	-	-	-	S	-	-	-	Belongs to the HesB IscA family
PMJDBAPL_01908	3.78e-23	-	-	-	-	-	-	-	-
PMJDBAPL_01909	6.13e-27	-	-	-	-	-	-	-	-
PMJDBAPL_01910	1.56e-31	-	-	-	-	-	-	-	-
PMJDBAPL_01911	6.25e-51	-	-	-	S	-	-	-	Protein of unknown function (DUF3021)
PMJDBAPL_01912	1.84e-104	-	-	-	S	-	-	-	NADPH-dependent FMN reductase
PMJDBAPL_01913	4.11e-85	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PMJDBAPL_01915	8.66e-203	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
PMJDBAPL_01916	1.69e-170	-	-	-	F	-	-	-	NUDIX domain
PMJDBAPL_01917	0.0	nadC2	6.3.4.21	-	F	ko:K00763	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
PMJDBAPL_01918	1.97e-130	pncA	-	-	Q	-	-	-	Isochorismatase family
PMJDBAPL_01919	7.31e-254	-	-	-	O	-	-	-	ADP-ribosylglycohydrolase
PMJDBAPL_01920	0.0	-	-	-	F	ko:K03457	-	ko00000	Belongs to the purine-cytosine permease (2.A.39) family
PMJDBAPL_01921	3.89e-209	-	-	-	G	-	-	-	Belongs to the carbohydrate kinase PfkB family
PMJDBAPL_01922	1.31e-50	hxlR	-	-	K	-	-	-	regulation of RNA biosynthetic process
PMJDBAPL_01923	3.51e-308	-	-	-	EGP	-	-	-	MFS transporter, metabolite H symporter (MHS) family protein
PMJDBAPL_01924	1.81e-169	-	-	-	IQ	-	-	-	dehydrogenase reductase
PMJDBAPL_01925	9.51e-51	-	-	-	-	-	-	-	-
PMJDBAPL_01926	6.62e-148	-	-	-	S	ko:K07118	-	ko00000	NAD(P)H-binding
PMJDBAPL_01927	2.3e-52	-	-	-	S	-	-	-	Cytochrome b5-like Heme/Steroid binding domain
PMJDBAPL_01928	0.0	nhaC	-	-	C	ko:K03315	-	ko00000,ko02000	Na H antiporter NhaC
PMJDBAPL_01929	1.69e-233	yeaB	-	-	P	-	-	-	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
PMJDBAPL_01931	1.11e-56	-	-	-	S	ko:K07002	-	ko00000	Serine hydrolase
PMJDBAPL_01932	3.11e-19	-	-	-	S	ko:K07002	-	ko00000	Serine hydrolase
PMJDBAPL_01933	1.26e-82	psiE	-	-	S	ko:K13256	-	ko00000	Phosphate-starvation-inducible E
PMJDBAPL_01934	1.96e-178	tpiA	5.3.1.1	-	G	ko:K01803	ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
PMJDBAPL_01936	1.39e-229	ydhF	-	-	S	-	-	-	Aldo keto reductase
PMJDBAPL_01937	2.26e-110	-	3.6.1.27	-	I	ko:K19302	ko00550,map00550	ko00000,ko00001,ko01000,ko01011	PAP2 superfamily
PMJDBAPL_01938	0.0	-	-	-	L	-	-	-	Helicase C-terminal domain protein
PMJDBAPL_01940	2.36e-120	-	-	-	L	ko:K07497	-	ko00000	hmm pf00665
PMJDBAPL_01941	6.57e-163	-	-	-	L	-	-	-	Helix-turn-helix domain
PMJDBAPL_01942	0.0	-	1.8.1.7	-	C	ko:K00383,ko:K21739	ko00480,ko04918,map00480,map04918	ko00000,ko00001,ko01000	Pyridine nucleotide-disulfide oxidoreductase
PMJDBAPL_01943	2.84e-73	-	-	-	S	-	-	-	Sugar efflux transporter for intercellular exchange
PMJDBAPL_01944	7.41e-163	-	-	-	-	-	-	-	-
PMJDBAPL_01945	1.31e-161	XK27_08875	-	-	O	-	-	-	PFAM peptidase M10A and M12B, matrixin and adamalysin
PMJDBAPL_01946	0.0	cadA	-	-	P	-	-	-	P-type ATPase
PMJDBAPL_01947	2.76e-269	-	5.4.2.7	-	G	ko:K01839	ko00030,ko00230,map00030,map00230	ko00000,ko00001,ko01000	Phosphotransfer between the C1 and C5 carbon atoms of pentose
PMJDBAPL_01948	4.03e-99	ywnA	-	-	K	-	-	-	Transcriptional regulator
PMJDBAPL_01949	1.77e-207	proWY	-	-	M	ko:K05845	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter, substrate-binding protein, QAT family
PMJDBAPL_01950	5.77e-140	proWZ	-	-	P	ko:K05846	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
PMJDBAPL_01951	1.44e-180	proV	-	-	E	ko:K05847	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter, ATP-binding protein
PMJDBAPL_01952	1.96e-138	-	-	-	P	ko:K05846	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter, permease protein
PMJDBAPL_01953	7.41e-102	msrB	1.8.4.12	-	O	ko:K07305	-	ko00000,ko01000	peptide methionine sulfoxide reductase
PMJDBAPL_01954	3.96e-275	-	3.5.1.18	-	E	ko:K01439	ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000	succinyl-diaminopimelate desuccinylase
PMJDBAPL_01955	5.25e-140	metI	-	-	P	ko:K02072	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
PMJDBAPL_01956	4.92e-244	metN	-	-	P	ko:K02071	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
PMJDBAPL_01957	3.28e-195	metQ	-	-	P	ko:K02073	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the nlpA lipoprotein family
PMJDBAPL_01958	5.14e-217	hdhL	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	Belongs to the LDH MDH superfamily
PMJDBAPL_01959	5.93e-281	blt	-	-	EGP	ko:K08153	-	ko00000,ko00002,ko02000	transporter
PMJDBAPL_01960	5.98e-55	-	1.3.5.4	-	S	ko:K00244	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	ko00000,ko00001,ko00002,ko01000	FMN binding
PMJDBAPL_01961	1.91e-150	nth	4.2.99.18	-	L	ko:K10773	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
PMJDBAPL_01962	0.0	ctrA	-	-	E	ko:K03294	-	ko00000	amino acid
PMJDBAPL_01963	0.0	gabT	2.6.1.19, 5.1.1.21	-	E	ko:K00823,ko:K20708	ko00250,ko00410,ko00640,ko00650,ko01100,ko01120,map00250,map00410,map00640,map00650,map01100,map01120	ko00000,ko00001,ko00002,ko01000,ko01007	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
PMJDBAPL_01965	1.07e-98	-	-	-	L	-	-	-	Transposase, IS116 IS110 IS902 family
PMJDBAPL_01966	2.47e-250	eriC	-	-	P	ko:K03281	-	ko00000	chloride
PMJDBAPL_01967	1.43e-256	napA	-	-	P	-	-	-	Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
PMJDBAPL_01968	0.0	-	-	-	L	-	-	-	DNA helicase
PMJDBAPL_01969	7.04e-107	ndk	2.7.4.6	-	F	ko:K00940	ko00230,ko00240,ko00983,ko01100,ko01110,ko01130,ko04016,map00230,map00240,map00983,map01100,map01110,map01130,map04016	ko00000,ko00001,ko00002,ko01000,ko04131	Belongs to the NDK family
PMJDBAPL_01970	1.39e-230	-	2.1.1.72	-	L	ko:K00571	-	ko00000,ko01000,ko02048	Belongs to the N(4) N(6)-methyltransferase family
PMJDBAPL_01971	5.54e-243	trpS	6.1.1.2	-	J	ko:K01867	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-I aminoacyl-tRNA synthetase family
PMJDBAPL_01972	5.11e-214	ppx	3.6.1.11, 3.6.1.40	-	FP	ko:K01524	ko00230,map00230	ko00000,ko00001,ko01000	exopolyphosphatase
PMJDBAPL_01973	7.91e-288	mvaA	1.1.1.88, 2.3.1.9	-	C	ko:K00054,ko:K00626	ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the HMG-CoA reductase family
PMJDBAPL_01974	1.09e-227	-	-	-	-	-	-	-	-
PMJDBAPL_01975	2.93e-168	cobB	-	-	K	ko:K12410	-	ko00000,ko01000	SIR2 family
PMJDBAPL_01977	7.86e-207	yunF	-	-	F	-	-	-	Protein of unknown function DUF72
PMJDBAPL_01978	0.0	metG	6.1.1.10	-	J	ko:K01874	ko00450,ko00970,map00450,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
PMJDBAPL_01979	1.3e-200	tatD	-	-	L	ko:K03424	-	ko00000,ko01000	hydrolase, TatD family
PMJDBAPL_01980	4.25e-128	rnmV	3.1.26.8	-	J	ko:K05985	-	ko00000,ko01000	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
PMJDBAPL_01981	1.85e-208	ksgA	2.1.1.182	-	J	ko:K02528	-	ko00000,ko01000,ko03009	Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
PMJDBAPL_01982	2.74e-50	veg	-	-	S	-	-	-	Biofilm formation stimulator VEG
PMJDBAPL_01983	2.44e-206	ispE	2.7.1.148	-	F	ko:K00919,ko:K16924	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko02000	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
PMJDBAPL_01984	3.48e-216	psaA	-	-	P	ko:K02077,ko:K11707	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the bacterial solute-binding protein 9 family
PMJDBAPL_01985	3.99e-157	adcC	-	-	P	ko:K02074,ko:K09817,ko:K11710	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter
PMJDBAPL_01986	8.32e-164	-	-	-	U	ko:K02075	-	ko00000,ko00002,ko02000	ABC 3 transport family
PMJDBAPL_01987	5.24e-191	purR	-	-	F	ko:K09685	-	ko00000,ko03000	pur operon repressor
PMJDBAPL_01988	3.17e-314	glmU	2.3.1.157, 2.7.7.23	-	M	ko:K04042	ko00520,ko01100,ko01130,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
PMJDBAPL_01989	9.36e-229	prs	2.7.6.1	-	F	ko:K00948	ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PMJDBAPL_01990	2.58e-102	-	-	-	-	-	-	-	-
PMJDBAPL_01991	4.65e-190	yidA	-	-	S	-	-	-	hydrolase
PMJDBAPL_01992	0.0	ywfO	-	-	S	ko:K06885	-	ko00000	HD domain protein
PMJDBAPL_01993	9.72e-188	lipL	2.3.1.200, 2.3.1.204	-	H	ko:K16869,ko:K18821	-	ko00000,ko01000	biotin lipoate A B protein ligase
PMJDBAPL_01994	9.28e-89	ywiB	-	-	S	-	-	-	Domain of unknown function (DUF1934)
PMJDBAPL_01995	1.04e-85	rpoE	-	-	K	ko:K03048	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko03021,ko03400	Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
PMJDBAPL_01996	0.0	pyrG	6.3.4.2	-	F	ko:K01937	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
PMJDBAPL_01997	1.58e-301	murA	2.5.1.7	-	M	ko:K00790	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PMJDBAPL_01998	9.43e-56	rpmE2	-	-	J	ko:K02909	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L31
PMJDBAPL_01999	2.26e-303	pts13C	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PMJDBAPL_02000	2.26e-213	-	-	-	S	-	-	-	Alpha/beta hydrolase of unknown function (DUF915)
PMJDBAPL_02001	1.43e-160	srtA	3.4.22.70	-	M	ko:K07284	-	ko00000,ko01000,ko01002,ko01011	sortase family
PMJDBAPL_02002	0.0	pps	2.7.9.2	-	H	ko:K01007	ko00620,ko00680,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate
PMJDBAPL_02003	2.61e-192	-	-	-	G	-	-	-	Right handed beta helix region
PMJDBAPL_02004	5.83e-177	tpiA	5.3.1.1	-	G	ko:K01803	ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
PMJDBAPL_02005	1.17e-209	fba	4.1.2.13, 4.1.2.29	-	G	ko:K01624,ko:K03339	ko00010,ko00030,ko00051,ko00562,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00562,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Fructose-1,6-bisphosphate aldolase, class II
PMJDBAPL_02006	2.14e-154	-	-	-	G	-	-	-	Belongs to the phosphoglycerate mutase family
PMJDBAPL_02007	6.66e-113	ptpA	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
PMJDBAPL_02008	4.93e-123	lemA	-	-	S	ko:K03744	-	ko00000	LemA family
PMJDBAPL_02009	2.61e-204	htpX	-	-	O	ko:K03799	-	ko00000,ko00002,ko01000,ko01002	Belongs to the peptidase M48B family
PMJDBAPL_02010	0.0	murF	6.3.2.10	-	M	ko:K01929	ko00300,ko00550,ko01100,ko01502,map00300,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
PMJDBAPL_02011	0.0	cshA	3.6.4.13	-	F	ko:K05592	ko03018,map03018	ko00000,ko00001,ko01000,ko03009,ko03019	DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
PMJDBAPL_02012	0.0	-	-	-	D	-	-	-	Domain of Unknown Function (DUF1542)
PMJDBAPL_02013	9.92e-212	glsA	3.5.1.2	-	E	ko:K01425	ko00220,ko00250,ko00471,ko01100,ko04724,ko04727,ko04964,ko05206,ko05230,map00220,map00250,map00471,map01100,map04724,map04727,map04964,map05206,map05230	ko00000,ko00001,ko01000	Belongs to the glutaminase family
PMJDBAPL_02014	0.0	dltD	-	-	M	ko:K03740	ko01503,ko02020,ko05150,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01504	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
PMJDBAPL_02015	1e-47	dltC	6.1.1.13	-	J	ko:K14188	ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01000,ko01504	Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PMJDBAPL_02016	5.87e-296	dltB	-	-	M	ko:K03739	ko01503,ko02020,ko05150,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01504	MBOAT, membrane-bound O-acyltransferase family
PMJDBAPL_02017	0.0	dltA	6.1.1.13	-	H	ko:K03367	ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01000,ko01504	Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PMJDBAPL_02018	1.3e-08	dltX	-	-	S	-	-	-	D-Ala-teichoic acid biosynthesis protein
PMJDBAPL_02019	3.12e-79	acpS	2.7.8.7	-	I	ko:K00997	ko00770,map00770	ko00000,ko00001,ko01000	Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
PMJDBAPL_02020	4.41e-269	alr	5.1.1.1, 5.1.1.5	-	E	ko:K01775,ko:K20707	ko00473,ko01100,ko01502,map00473,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
PMJDBAPL_02021	1.3e-82	ndoA	-	-	L	ko:K07171	-	ko00000,ko01000,ko02048	Toxic component of a toxin-antitoxin (TA) module
PMJDBAPL_02022	0.0	-	-	-	U	-	-	-	Belongs to the purine-cytosine permease (2.A.39) family
PMJDBAPL_02023	8.83e-306	codA	3.5.4.1	-	F	ko:K01485	ko00240,ko00330,ko01100,map00240,map00330,map01100	ko00000,ko00001,ko01000	cytosine deaminase
PMJDBAPL_02024	2.4e-187	mhpD	-	-	Q	ko:K02509	ko00350,ko01120,map00350,map01120	ko00000,ko00001,ko01000	hydratase
PMJDBAPL_02025	6.37e-144	-	-	-	S	-	-	-	(CBS) domain
PMJDBAPL_02026	2.67e-130	pth	3.1.1.29	-	J	ko:K01056	-	ko00000,ko01000,ko03012	The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
PMJDBAPL_02027	0.0	mfd	-	-	L	ko:K03723	ko03420,map03420	ko00000,ko00001,ko01000,ko03400	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
PMJDBAPL_02028	1.01e-52	yabO	-	-	J	-	-	-	S4 domain protein
PMJDBAPL_02029	8.69e-76	divIC	-	-	D	ko:K13052	-	ko00000,ko03036	Septum formation initiator
PMJDBAPL_02030	5.75e-103	yabR	-	-	J	ko:K07571	-	ko00000	RNA binding
PMJDBAPL_02031	0.0	tilS	2.4.2.8, 6.3.4.19	-	J	ko:K04075,ko:K15780	ko00230,ko01100,ko01110,map00230,map01100,map01110	ko00000,ko00001,ko01000,ko03016	Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
PMJDBAPL_02032	3.02e-124	hpt	2.4.2.8	-	F	ko:K00760	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the purine pyrimidine phosphoribosyltransferase family
PMJDBAPL_02033	0.0	ftsH	-	-	O	ko:K03798	-	ko00000,ko00002,ko01000,ko01002,ko03110	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
PMJDBAPL_02034	5.35e-217	hslO	-	-	O	ko:K04083	-	ko00000,ko03110	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
PMJDBAPL_02035	1.78e-240	dus	-	-	J	ko:K05540	-	ko00000,ko01000,ko03016	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PMJDBAPL_02036	0.0	lysS	6.1.1.6	-	J	ko:K04567	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-II aminoacyl-tRNA synthetase family
PMJDBAPL_02037	5.01e-68	entB	-	-	Q	-	-	-	Isochorismatase family
PMJDBAPL_02038	2.01e-55	-	-	-	L	-	-	-	Transposase
PMJDBAPL_02050	1.58e-28	-	-	-	K	ko:K07729	-	ko00000,ko03000	Helix-turn-helix domain
PMJDBAPL_02051	3.81e-54	-	-	-	L	-	-	-	Transposase
PMJDBAPL_02052	0.0	rexB	3.6.4.12	-	L	ko:K16899	-	ko00000,ko01000,ko03400	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
PMJDBAPL_02053	0.0	addA	3.6.4.12	-	L	ko:K16898	-	ko00000,ko01000,ko03400	ATP-dependent helicase nuclease subunit A
PMJDBAPL_02054	1e-219	malR1	-	-	K	ko:K02529	-	ko00000,ko03000	Transcriptional regulator, LacI family
PMJDBAPL_02055	3.49e-270	atoB	1.1.1.88, 2.3.1.9	-	I	ko:K00054,ko:K00626	ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the thiolase family
PMJDBAPL_02056	0.0	malT	-	-	G	ko:K16211	-	ko00000,ko02000	Major Facilitator
PMJDBAPL_02057	0.0	mapA	2.4.1.8	GH65	G	ko:K00691	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	hydrolase, family 65, central catalytic
PMJDBAPL_02058	4.32e-155	pgmB	5.4.2.6	-	S	ko:K01838	ko00500,map00500	ko00000,ko00001,ko01000	beta-phosphoglucomutase
PMJDBAPL_02059	0.0	gshAB	6.3.2.2	-	H	ko:K01919	ko00270,ko00480,ko01100,map00270,map00480,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the glutamate--cysteine ligase type 1 family
PMJDBAPL_02060	2.5e-174	puuD	-	-	S	ko:K07010	-	ko00000,ko01002	peptidase C26
PMJDBAPL_02061	7.32e-215	-	-	-	C	-	-	-	Aldo keto reductase
PMJDBAPL_02062	1.86e-63	-	-	-	S	-	-	-	Cupin 2, conserved barrel domain protein
PMJDBAPL_02063	0.0	glpQ	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	Membrane domain of glycerophosphoryl diester phosphodiesterase
PMJDBAPL_02064	6.51e-114	-	-	-	S	-	-	-	ECF-type riboflavin transporter, S component
PMJDBAPL_02065	0.0	nox	1.6.3.4	-	C	ko:K17869	-	ko00000,ko01000	NADH oxidase
PMJDBAPL_02066	5.25e-233	guaC	1.7.1.7	-	F	ko:K00364	ko00230,map00230	ko00000,ko00001,ko01000	Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
PMJDBAPL_02067	0.0	purA	6.3.4.4	-	F	ko:K01939	ko00230,ko00250,ko01100,map00230,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
PMJDBAPL_02068	8.02e-118	-	-	-	-	-	-	-	-
PMJDBAPL_02069	4.65e-123	pyrR	2.4.2.9	-	F	ko:K02825	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000,ko03000	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
PMJDBAPL_02071	8.95e-18	-	-	-	E	-	-	-	amino acid
PMJDBAPL_02072	3.14e-140	-	-	-	K	-	-	-	Transcriptional regulator, TetR family
PMJDBAPL_02073	4.06e-93	-	-	-	-	-	-	-	-
PMJDBAPL_02074	0.0	tagE6	2.4.1.52	GT4	M	ko:K00712	-	ko00000,ko01000,ko01003	Glycosyl transferases group 1
PMJDBAPL_02075	0.0	-	2.4.1.52	GT4	M	ko:K00712	-	ko00000,ko01000,ko01003	Poly(Glycerol-phosphate) alpha-glucosyltransferase
PMJDBAPL_02076	0.0	sdrF	-	-	M	ko:K14194	ko05150,map05150	ko00000,ko00001	protein which possibly mediates interactions of S.aureus with components of the extracellular matrix of higher eukaryotes
PMJDBAPL_02077	0.0	malL	3.2.1.10	GH13	G	ko:K01182	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Alpha amylase, catalytic domain protein
PMJDBAPL_02078	0.0	-	-	-	G	ko:K16211	-	ko00000,ko02000	Major Facilitator
PMJDBAPL_02079	0.0	carB	6.3.5.5	-	F	ko:K01955	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthase
PMJDBAPL_02080	3.6e-266	carA	6.3.5.5	-	F	ko:K01956	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthetase glutamine chain
PMJDBAPL_02081	0.0	-	-	-	G	ko:K16211	-	ko00000,ko02000	Major Facilitator
PMJDBAPL_02082	6.91e-235	cytR	-	-	K	ko:K02529,ko:K03604	-	ko00000,ko03000	Transcriptional regulator, LacI family
PMJDBAPL_02083	0.0	rumA_1	2.1.1.190, 2.1.1.35	-	J	ko:K00557,ko:K03215	-	ko00000,ko01000,ko03009,ko03016	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PMJDBAPL_02084	1.72e-128	-	1.5.1.36	-	S	ko:K19784,ko:K22393	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	reductase
PMJDBAPL_02085	5.54e-270	-	1.5.1.36	-	S	ko:K19784,ko:K22393,ko:K22394	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	reductase
PMJDBAPL_02086	2.82e-217	apbE	2.7.1.180	-	H	ko:K03734	-	ko00000,ko01000	Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
PMJDBAPL_02087	0.0	pepD2	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
PMJDBAPL_02088	0.0	yfiC	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter
PMJDBAPL_02089	0.0	ycfI	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter, ATP-binding protein
PMJDBAPL_02090	3.33e-241	ldhA	1.1.1.28	-	C	ko:K03778,ko:K18347	ko00620,ko01120,ko01502,ko02020,map00620,map01120,map01502,map02020	ko00000,ko00001,ko00002,ko01000,ko01504	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PMJDBAPL_02091	4.87e-173	glpF	-	-	U	ko:K02440	-	ko00000,ko02000	Belongs to the MIP aquaporin (TC 1.A.8) family
PMJDBAPL_02092	9.51e-187	-	-	-	-	-	-	-	-
PMJDBAPL_02093	1.77e-198	-	-	-	G	-	-	-	Xylose isomerase domain protein TIM barrel
PMJDBAPL_02094	1.87e-236	XK27_12525	-	-	S	-	-	-	AI-2E family transporter
PMJDBAPL_02095	6.1e-170	XK27_07210	-	-	S	-	-	-	B3 4 domain
PMJDBAPL_02096	4.73e-102	yybA	-	-	K	-	-	-	Transcriptional regulator
PMJDBAPL_02097	5.25e-118	-	-	-	K	-	-	-	Domain of unknown function (DUF1836)
PMJDBAPL_02098	1.63e-116	-	-	-	GM	-	-	-	epimerase
PMJDBAPL_02099	2.31e-197	-	-	-	V	-	-	-	(ABC) transporter
PMJDBAPL_02100	4.1e-308	yhdP	-	-	S	-	-	-	Transporter associated domain
PMJDBAPL_02101	4e-110	nrdI	-	-	F	ko:K03647	-	ko00000	Belongs to the NrdI family
PMJDBAPL_02102	1.06e-96	-	-	-	S	ko:K04750	-	ko00000	3-demethylubiquinone-9 3-methyltransferase
PMJDBAPL_02103	5.94e-243	yycB	-	-	P	ko:K03449	-	ko00000,ko02000	Transporter, major facilitator family protein
PMJDBAPL_02104	0.0	zwf	1.1.1.363, 1.1.1.49	-	G	ko:K00036	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,ko05230,map00030,map00480,map01100,map01110,map01120,map01130,map01200,map05230	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
PMJDBAPL_02105	0.0	gnd	1.1.1.343, 1.1.1.44	-	H	ko:K00033	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
PMJDBAPL_02106	2.14e-53	-	-	-	-	-	-	-	-
PMJDBAPL_02107	0.0	lacS	-	-	G	ko:K11104,ko:K16209	-	ko00000,ko02000	Transporter
PMJDBAPL_02108	2.32e-104	usp5	-	-	T	-	-	-	universal stress protein
PMJDBAPL_02109	9.78e-107	-	-	-	K	ko:K03719	-	ko00000,ko03000,ko03036	AsnC family
PMJDBAPL_02110	2.14e-296	gltT	-	-	U	ko:K03309,ko:K11102	-	ko00000,ko02000	Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
PMJDBAPL_02111	2.56e-133	apl	3.1.3.1	-	S	ko:K01077	ko00730,ko00790,ko01100,ko02020,map00730,map00790,map01100,map02020	ko00000,ko00001,ko00002,ko00537,ko01000,ko04147	SNARE associated Golgi protein
PMJDBAPL_02112	6.6e-230	galR	-	-	K	ko:K02529	-	ko00000,ko03000	Transcriptional regulator
PMJDBAPL_02113	0.0	galT	2.7.7.12	-	G	ko:K00965	ko00052,ko00520,ko01100,ko04917,map00052,map00520,map01100,map04917	ko00000,ko00001,ko00002,ko01000	UDP-glucose--hexose-1-phosphate uridylyltransferase
PMJDBAPL_02114	6.24e-289	galK	2.7.1.6	-	F	ko:K00849	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
PMJDBAPL_02115	1.28e-225	celE3	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase family
PMJDBAPL_02116	2.22e-186	-	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Tyrosine phosphatase family
PMJDBAPL_02117	1.08e-118	-	-	-	S	ko:K06910	-	ko00000	Phosphatidylethanolamine-binding protein
PMJDBAPL_02118	1.21e-48	-	-	-	-	-	-	-	-
PMJDBAPL_02119	7.19e-68	-	-	-	-	-	-	-	-
PMJDBAPL_02120	1.69e-256	-	-	-	-	-	-	-	-
PMJDBAPL_02121	5.53e-106	greA	-	-	K	ko:K03624	-	ko00000,ko03021	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PMJDBAPL_02122	8.01e-175	pnuC	-	-	H	ko:K03811	-	ko00000,ko02000	nicotinamide mononucleotide transporter
PMJDBAPL_02123	9.86e-200	yvgN	-	-	S	-	-	-	Aldo keto reductase
PMJDBAPL_02124	1.06e-161	XK27_10500	-	-	K	-	-	-	response regulator
PMJDBAPL_02125	1.02e-231	kinG	-	-	T	-	-	-	Histidine kinase-like ATPases
PMJDBAPL_02126	7.11e-174	XK27_05695	-	-	V	ko:K02003,ko:K19083	ko02010,ko02020,map02010,map02020	ko00000,ko00001,ko00002,ko02000	ABC transporter, ATP-binding protein
PMJDBAPL_02127	0.0	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	FtsX-like permease family
PMJDBAPL_02128	8.74e-196	metA	2.3.1.46	-	E	ko:K00651	ko00270,ko00920,ko01100,ko01110,ko01230,map00270,map00920,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Transfers an acetyl group from acetyl-CoA to
PMJDBAPL_02129	1.4e-208	cysK	2.5.1.47	-	E	ko:K01738	ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the cysteine synthase cystathionine beta- synthase family
PMJDBAPL_02130	3.68e-67	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
PMJDBAPL_02131	0.0	cls	-	-	I	ko:K06131	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PMJDBAPL_02132	1.65e-249	-	-	-	EGP	-	-	-	Major Facilitator
PMJDBAPL_02133	3.48e-112	ymdB	-	-	S	-	-	-	Macro domain protein
PMJDBAPL_02134	6.11e-142	-	-	-	K	-	-	-	Helix-turn-helix domain
PMJDBAPL_02135	0.0	pepO	-	-	O	ko:K07386	-	ko00000,ko01000,ko01002	Peptidase family M13
PMJDBAPL_02136	2.45e-63	-	-	-	-	-	-	-	-
PMJDBAPL_02137	2.19e-290	-	-	-	S	-	-	-	Putative metallopeptidase domain
PMJDBAPL_02138	1.14e-258	-	-	-	S	-	-	-	associated with various cellular activities
PMJDBAPL_02139	2.34e-154	yxlJ	3.2.2.21	-	L	ko:K03652	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Belongs to the DNA glycosylase MPG family
PMJDBAPL_02140	8.5e-86	yeaO	-	-	S	-	-	-	Protein of unknown function, DUF488
PMJDBAPL_02142	4.59e-149	yrkL	-	-	S	-	-	-	Flavodoxin-like fold
PMJDBAPL_02143	3.32e-72	-	-	-	-	-	-	-	-
PMJDBAPL_02145	5.38e-158	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
PMJDBAPL_02146	2.04e-65	-	-	-	-	-	-	-	-