Read a JSON File

ORF_ID	e_value	Gene_name	EC_number	CAZy	COGs	KEGG_ko	KEGG_Pathway	BRITE	Description
NMKPALMA_00001	0.0	-	-	-	EP	-	-	-	Psort location Cytoplasmic, score
NMKPALMA_00002	1.26e-136	-	-	-	M	-	-	-	LysM domain protein
NMKPALMA_00003	8.45e-192	exoA	3.1.11.2	-	L	ko:K01142	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	exodeoxyribonuclease III
NMKPALMA_00004	1.98e-298	-	1.3.1.1	-	E	ko:K17722	ko00240,ko00410,ko00770,ko01100,map00240,map00410,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
NMKPALMA_00005	3.25e-309	-	1.3.1.1	-	C	ko:K17723	ko00240,ko00410,ko00770,ko01100,map00240,map00410,map00770,map01100	ko00000,ko00001,ko00002,ko01000	4Fe-4S dicluster domain
NMKPALMA_00006	2.14e-195	yeaE	-	-	S	-	-	-	Aldo keto
NMKPALMA_00007	4.45e-99	hsp	-	-	O	ko:K13993	ko04141,map04141	ko00000,ko00001,ko03110	Belongs to the small heat shock protein (HSP20) family
NMKPALMA_00008	0.0	umuC	-	-	L	ko:K03502	-	ko00000,ko03400	impB/mucB/samB family C-terminal domain
NMKPALMA_00009	2.91e-110	-	-	-	S	-	-	-	Short repeat of unknown function (DUF308)
NMKPALMA_00010	7.03e-33	-	-	-	-	-	-	-	-
NMKPALMA_00011	8.18e-134	-	-	-	V	-	-	-	VanZ like family
NMKPALMA_00012	1.16e-301	cycA	-	-	E	ko:K03293,ko:K11737	-	ko00000,ko02000	Amino acid permease
NMKPALMA_00013	1.25e-111	perR	-	-	P	ko:K03711,ko:K09825	-	ko00000,ko03000	Belongs to the Fur family
NMKPALMA_00014	0.0	-	-	-	EGP	-	-	-	Major Facilitator
NMKPALMA_00015	1.75e-118	tag1	3.2.2.20	-	L	ko:K01246	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	glycosylase
NMKPALMA_00016	7.77e-280	metK	2.5.1.6	-	H	ko:K00789	ko00270,ko01100,ko01110,ko01230,map00270,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
NMKPALMA_00017	0.0	leuS	6.1.1.4	-	J	ko:K01869	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Belongs to the class-I aminoacyl-tRNA synthetase family
NMKPALMA_00018	3.56e-56	-	-	-	-	-	-	-	-
NMKPALMA_00019	0.0	ytgP	-	-	S	ko:K03328	-	ko00000	Polysaccharide biosynthesis protein
NMKPALMA_00020	1.44e-195	nnrD	4.2.1.136, 5.1.99.6	-	H	ko:K17758,ko:K17759	-	ko00000,ko01000	Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
NMKPALMA_00021	0.0	pepV	3.5.1.18	-	E	ko:K01270,ko:K01274,ko:K01439	ko00300,ko00480,ko01100,ko01120,ko01230,map00300,map00480,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000,ko01002	dipeptidase PepV
NMKPALMA_00022	2.55e-111	-	-	-	T	-	-	-	Belongs to the universal stress protein A family
NMKPALMA_00023	7.77e-223	-	-	-	NU	-	-	-	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
NMKPALMA_00024	3.06e-150	dgk2	-	-	F	-	-	-	deoxynucleoside kinase
NMKPALMA_00025	1.53e-146	-	-	-	-	-	-	-	-
NMKPALMA_00026	2.41e-236	rbsR	-	-	K	ko:K02529	-	ko00000,ko03000	Periplasmic binding proteins and sugar binding domain of LacI family
NMKPALMA_00027	5.7e-208	rbsK	2.7.1.15	-	H	ko:K00852	ko00030,map00030	ko00000,ko00001,ko01000	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
NMKPALMA_00028	1.78e-42	-	-	-	-	-	-	-	-
NMKPALMA_00029	5.8e-149	XK27_07085	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
NMKPALMA_00030	9.17e-59	-	-	-	-	-	-	-	-
NMKPALMA_00032	1.29e-235	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
NMKPALMA_00033	1.43e-41	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
NMKPALMA_00034	1.41e-79	-	-	-	L	ko:K07491	-	ko00000	PFAM transposase IS200-family protein
NMKPALMA_00035	2.8e-229	apbE	2.7.1.180	-	H	ko:K03734	-	ko00000,ko01000	Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
NMKPALMA_00036	2.51e-266	-	1.5.1.36	-	S	ko:K19784,ko:K22393,ko:K22394	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	reductase
NMKPALMA_00037	8.9e-131	-	1.5.1.36	-	S	ko:K19784,ko:K22393	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	reductase
NMKPALMA_00039	0.0	rumA_1	2.1.1.190, 2.1.1.35	-	J	ko:K00557,ko:K03215	-	ko00000,ko01000,ko03009,ko03016	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
NMKPALMA_00040	4e-234	cytR	-	-	K	ko:K02529,ko:K03604	-	ko00000,ko03000	Transcriptional regulator, LacI family
NMKPALMA_00041	0.0	-	-	-	G	ko:K16211	-	ko00000,ko02000	Major Facilitator
NMKPALMA_00042	4.2e-265	carA	6.3.5.5	-	F	ko:K01956	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthetase glutamine chain
NMKPALMA_00043	0.0	carB	6.3.5.5	-	F	ko:K01955	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthase
NMKPALMA_00044	0.0	-	-	-	G	ko:K16211	-	ko00000,ko02000	Major Facilitator
NMKPALMA_00045	0.0	malL	3.2.1.10	GH13	G	ko:K01182	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Alpha amylase, catalytic domain protein
NMKPALMA_00046	0.0	-	-	-	M	-	-	-	domain protein
NMKPALMA_00047	0.0	-	2.4.1.52	GT4	M	ko:K00712	-	ko00000,ko01000,ko01003	Poly(Glycerol-phosphate) alpha-glucosyltransferase
NMKPALMA_00048	0.0	tagE6	2.4.1.52	GT4	M	ko:K00712	-	ko00000,ko01000,ko01003	Glycosyl transferases group 1
NMKPALMA_00049	8.53e-95	-	-	-	-	-	-	-	-
NMKPALMA_00050	6.88e-144	-	-	-	K	-	-	-	Transcriptional regulator, TetR family
NMKPALMA_00052	4.65e-123	pyrR	2.4.2.9	-	F	ko:K02825	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000,ko03000	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
NMKPALMA_00053	2.34e-119	-	-	-	-	-	-	-	-
NMKPALMA_00054	0.0	purA	6.3.4.4	-	F	ko:K01939	ko00230,ko00250,ko01100,map00230,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
NMKPALMA_00055	1.46e-239	guaC	1.7.1.7	-	F	ko:K00364	ko00230,map00230	ko00000,ko00001,ko01000	Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
NMKPALMA_00056	0.0	nox	1.6.3.4	-	C	ko:K17869	-	ko00000,ko01000	NADH oxidase
NMKPALMA_00057	6.51e-114	-	-	-	S	-	-	-	ECF-type riboflavin transporter, S component
NMKPALMA_00058	0.0	glpQ	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	Membrane domain of glycerophosphoryl diester phosphodiesterase
NMKPALMA_00059	1.04e-214	-	-	-	C	-	-	-	Aldo keto reductase
NMKPALMA_00060	6.13e-175	puuD	-	-	S	ko:K07010	-	ko00000,ko01002	peptidase C26
NMKPALMA_00061	0.0	gshAB	6.3.2.2	-	H	ko:K01919	ko00270,ko00480,ko01100,map00270,map00480,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the glutamate--cysteine ligase type 1 family
NMKPALMA_00062	3.31e-264	-	-	-	P	-	-	-	Voltage gated chloride channel
NMKPALMA_00063	2.6e-279	sptS	-	-	T	-	-	-	Histidine kinase
NMKPALMA_00064	4.12e-149	dltr	-	-	K	-	-	-	response regulator
NMKPALMA_00065	2.05e-111	-	-	-	T	-	-	-	Region found in RelA / SpoT proteins
NMKPALMA_00066	3.61e-95	-	-	-	-	-	-	-	-
NMKPALMA_00067	1.76e-154	pgmB	5.4.2.6	-	S	ko:K01838	ko00500,map00500	ko00000,ko00001,ko01000	beta-phosphoglucomutase
NMKPALMA_00068	0.0	mapA	2.4.1.8	GH65	G	ko:K00691	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	hydrolase, family 65, central catalytic
NMKPALMA_00069	0.0	malT	-	-	G	ko:K16211	-	ko00000,ko02000	Major Facilitator
NMKPALMA_00070	3.98e-276	atoB	1.1.1.88, 2.3.1.9	-	I	ko:K00054,ko:K00626	ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the thiolase family
NMKPALMA_00071	6.31e-223	malR1	-	-	K	ko:K02529	-	ko00000,ko03000	Transcriptional regulator, LacI family
NMKPALMA_00072	0.0	addA	3.6.4.12	-	L	ko:K16898	-	ko00000,ko01000,ko03400	ATP-dependent helicase nuclease subunit A
NMKPALMA_00073	0.0	rexB	3.6.4.12	-	L	ko:K16899	-	ko00000,ko01000,ko03400	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
NMKPALMA_00074	0.0	cls	-	-	I	ko:K06131	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
NMKPALMA_00075	1.22e-139	-	-	-	K	-	-	-	PFAM GCN5-related N-acetyltransferase
NMKPALMA_00077	5.1e-264	menC	4.2.1.113	-	H	ko:K02549	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB)
NMKPALMA_00078	0.0	clpE	-	-	O	ko:K03697,ko:K04086	-	ko00000,ko03110	associated with various cellular activities
NMKPALMA_00079	4.15e-42	-	-	-	-	-	-	-	-
NMKPALMA_00080	2.13e-277	-	-	-	E	ko:K00841	ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase
NMKPALMA_00081	1.32e-225	ldhD	1.1.1.28	-	CH	ko:K03778	ko00620,ko01120,map00620,map01120	ko00000,ko00001,ko01000	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
NMKPALMA_00082	6.86e-98	-	-	-	O	-	-	-	OsmC-like protein
NMKPALMA_00084	6.86e-303	comA	-	-	V	ko:K06147,ko:K06148,ko:K12292,ko:K20344	ko02010,ko02020,ko02024,map02010,map02020,map02024	ko00000,ko00001,ko01000,ko02000	ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
NMKPALMA_00087	7.76e-160	-	-	-	K	ko:K07707	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko02022	LytTr DNA-binding domain
NMKPALMA_00088	2.13e-180	-	2.7.13.3	-	T	ko:K07706	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	GHKL domain
NMKPALMA_00089	1.17e-14	-	2.7.13.3	-	T	ko:K07706	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	GHKL domain
NMKPALMA_00092	0.0	-	-	-	S	-	-	-	Putative peptidoglycan binding domain
NMKPALMA_00093	8.13e-64	-	-	-	-	-	-	-	-
NMKPALMA_00094	5.58e-272	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	MacB-like periplasmic core domain
NMKPALMA_00095	9.4e-165	-	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter
NMKPALMA_00096	5.81e-200	hlyD3	-	-	M	ko:K02005	-	ko00000	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
NMKPALMA_00097	0.0	gabD	1.2.1.16, 1.2.1.20, 1.2.1.79	-	C	ko:K00135	ko00250,ko00310,ko00350,ko00650,ko00760,ko01100,ko01120,map00250,map00310,map00350,map00650,map00760,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Belongs to the aldehyde dehydrogenase family
NMKPALMA_00098	8.33e-187	-	1.5.1.2	-	E	ko:K00286	ko00330,ko01100,ko01110,ko01130,ko01230,map00330,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
NMKPALMA_00099	2.51e-191	-	-	-	E	-	-	-	Glyoxalase-like domain
NMKPALMA_00100	8.4e-200	-	-	-	U	ko:K05340	-	ko00000,ko02000	sugar transport
NMKPALMA_00101	1.08e-288	dhaT	1.1.1.202	-	C	ko:K00086	ko00561,ko00640,map00561,map00640	ko00000,ko00001,ko01000	Dehydrogenase
NMKPALMA_00102	1.5e-123	-	-	-	S	-	-	-	reductase
NMKPALMA_00104	2.63e-115	rlmH	2.1.1.177	-	J	ko:K00783	-	ko00000,ko01000,ko03009	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
NMKPALMA_00105	2.2e-227	ABC-SBP	-	-	S	ko:K01989	-	ko00000,ko00002,ko02000	ABC transporter
NMKPALMA_00106	6.77e-116	pgpA	-	-	I	-	-	-	Phosphatidylglycerophosphatase A
NMKPALMA_00107	1.31e-286	htrA	3.4.21.107	-	O	ko:K04771	ko01503,ko02020,map01503,map02020	ko00000,ko00001,ko00002,ko01000,ko01002,ko03110	serine protease
NMKPALMA_00108	4.35e-197	vicX	3.1.26.11	-	S	ko:K00784	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	domain protein
NMKPALMA_00109	7.45e-195	yycI	-	-	S	-	-	-	YycH protein
NMKPALMA_00110	0.0	yycH	-	-	S	-	-	-	YycH protein
NMKPALMA_00111	0.0	vicK	2.7.13.3	-	T	ko:K07652	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
NMKPALMA_00112	1.29e-168	yycF	-	-	K	ko:K07668	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	response regulator
NMKPALMA_00114	0.0	lmrA	3.6.3.44	-	V	ko:K02021,ko:K18104	ko01501,ko02010,map01501,map02010	ko00000,ko00001,ko00002,ko01000,ko01504,ko02000	ABC transporter
NMKPALMA_00115	2.2e-95	-	-	-	K	ko:K18909	-	ko00000,ko00002,ko01504,ko03000	helix_turn_helix multiple antibiotic resistance protein
NMKPALMA_00117	6.82e-128	-	-	-	K	-	-	-	DNA-binding helix-turn-helix protein
NMKPALMA_00118	2.17e-209	-	-	-	S	-	-	-	Polyphosphate nucleotide phosphotransferase, PPK2 family
NMKPALMA_00119	1.1e-80	-	-	-	-	-	-	-	-
NMKPALMA_00120	4.79e-272	yttB	-	-	EGP	-	-	-	Major Facilitator
NMKPALMA_00121	3.65e-308	dnaB	3.6.4.12	-	L	ko:K02314	ko03030,ko04112,map03030,map04112	ko00000,ko00001,ko01000,ko03032	Participates in initiation and elongation during chromosome replication
NMKPALMA_00122	1.25e-97	rplI	-	-	J	ko:K02939	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to the 23S rRNA
NMKPALMA_00123	0.0	yybT	-	-	T	-	-	-	signaling protein consisting of a modified GGDEF domain and a DHH domain
NMKPALMA_00124	9.36e-48	rpsR	-	-	J	ko:K02963	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
NMKPALMA_00125	1.46e-114	ssb	-	-	L	ko:K03111	ko03030,ko03430,ko03440,map03030,map03430,map03440	ko00000,ko00001,ko03029,ko03032,ko03400	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
NMKPALMA_00126	4.55e-64	rpsF	-	-	J	ko:K02990	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Binds together with S18 to 16S ribosomal RNA
NMKPALMA_00127	0.0	gyrA	5.99.1.3	-	L	ko:K02469	-	ko00000,ko01000,ko03032,ko03400	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
NMKPALMA_00128	0.0	gyrB	5.99.1.3	-	L	ko:K02470	-	ko00000,ko01000,ko03032,ko03400	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
NMKPALMA_00129	2.95e-262	recF	-	-	L	ko:K03629	ko03440,map03440	ko00000,ko00001,ko03400	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
NMKPALMA_00130	5.41e-47	yaaA	-	-	S	ko:K14761	-	ko00000,ko03009	S4 domain protein YaaA
NMKPALMA_00131	5.98e-265	dnaN	2.7.7.7	-	L	ko:K02338	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
NMKPALMA_00132	0.0	dnaA	-	-	L	ko:K02313	ko02020,ko04112,map02020,map04112	ko00000,ko00001,ko03032,ko03036	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
NMKPALMA_00133	7.96e-21	rpmH	-	-	J	ko:K02914	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL34 family
NMKPALMA_00134	1.39e-76	rnpA	3.1.26.5	-	J	ko:K03536	-	ko00000,ko01000,ko03016	RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
NMKPALMA_00135	2.96e-172	yidC	-	-	U	ko:K03217	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044,ko03029	Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
NMKPALMA_00136	1.87e-171	jag	-	-	S	ko:K06346	-	ko00000	R3H domain protein
NMKPALMA_00137	0.0	mnmE	-	-	S	ko:K03650	-	ko00000,ko01000,ko03016	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
NMKPALMA_00138	0.0	gidA	-	-	D	ko:K03495	-	ko00000,ko03016,ko03036	NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
NMKPALMA_00139	0.0	asnB	6.3.5.4	-	E	ko:K01953	ko00250,ko01100,ko01110,map00250,map01100,map01110	ko00000,ko00001,ko01000,ko01002	Asparagine synthase
NMKPALMA_00140	0.0	murE	6.3.2.13, 6.3.2.7	-	M	ko:K01928,ko:K05362	ko00300,ko00550,ko01100,map00300,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
NMKPALMA_00141	2.11e-314	yxbA	6.3.1.12	-	S	ko:K17810	-	ko00000,ko01000	ATP-grasp enzyme
NMKPALMA_00142	2.44e-147	lepB	3.4.21.89	-	U	ko:K03100	ko02024,ko03060,map02024,map03060	ko00000,ko00001,ko01000,ko01002	Belongs to the peptidase S26 family
NMKPALMA_00143	2.1e-119	-	2.3.1.183	-	M	ko:K03823	ko00440,ko01130,map00440,map01130	ko00000,ko00001,ko01000	Acetyltransferase, GNAT family
NMKPALMA_00144	2.65e-212	-	-	-	S	-	-	-	reductase
NMKPALMA_00145	0.0	-	-	-	S	-	-	-	amidohydrolase
NMKPALMA_00146	4.22e-50	-	-	-	K	ko:K20375	ko02024,map02024	ko00000,ko00001,ko03000	Transcriptional activator, Rgg GadR MutR family
NMKPALMA_00147	2.66e-106	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
NMKPALMA_00148	2.02e-30	-	-	-	S	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 type transporter
NMKPALMA_00149	1.02e-11	-	-	-	-	-	-	-	-
NMKPALMA_00150	2.24e-66	azlD	-	-	E	-	-	-	Branched-chain amino acid transport
NMKPALMA_00151	9.14e-146	-	-	-	S	-	-	-	Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
NMKPALMA_00152	1.5e-10	-	-	-	-	-	-	-	-
NMKPALMA_00153	2.06e-160	-	-	-	S	ko:K07507	-	ko00000,ko02000	MgtC family
NMKPALMA_00154	3.69e-124	hpt	2.4.2.8	-	F	ko:K00760	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the purine pyrimidine phosphoribosyltransferase family
NMKPALMA_00155	1.89e-252	flp	-	-	V	-	-	-	Beta-lactamase
NMKPALMA_00156	4.67e-73	-	-	-	S	-	-	-	Antibiotic biosynthesis monooxygenase
NMKPALMA_00157	1.08e-116	-	-	-	J	ko:K19055	-	ko00000,ko01000,ko03016	Aminoacyl-tRNA editing domain
NMKPALMA_00158	4.01e-152	-	-	-	K	ko:K07707	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko02022	LytTr DNA-binding domain
NMKPALMA_00159	6.59e-264	-	2.7.13.3	-	T	ko:K07706	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	GHKL domain
NMKPALMA_00164	8.74e-151	-	-	-	H	-	-	-	RibD C-terminal domain
NMKPALMA_00165	7.76e-207	-	-	-	S	ko:K07088	-	ko00000	Membrane transport protein
NMKPALMA_00166	1.96e-154	-	-	-	T	-	-	-	Transcriptional regulatory protein, C terminal
NMKPALMA_00167	2.06e-297	-	-	-	T	-	-	-	GHKL domain
NMKPALMA_00168	9.94e-134	-	-	-	S	-	-	-	Peptidase propeptide and YPEB domain
NMKPALMA_00169	5.86e-139	-	-	-	P	-	-	-	nitric oxide dioxygenase activity
NMKPALMA_00170	1.01e-10	-	-	-	S	ko:K07124	-	ko00000	Enoyl-(Acyl carrier protein) reductase
NMKPALMA_00171	2.18e-45	yphJ	4.1.1.44	-	S	ko:K01607	ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220	ko00000,ko00001,ko01000	decarboxylase
NMKPALMA_00172	1.62e-09	yphJ	4.1.1.44	-	S	ko:K01607	ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220	ko00000,ko00001,ko01000	decarboxylase
NMKPALMA_00173	2.57e-109	-	-	-	C	-	-	-	Flavodoxin
NMKPALMA_00174	1.95e-44	lysR	-	-	K	-	-	-	Transcriptional regulator
NMKPALMA_00175	1.34e-104	-	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	transferase hexapeptide repeat
NMKPALMA_00176	4.7e-181	-	-	-	S	-	-	-	Alpha beta hydrolase
NMKPALMA_00177	6.93e-195	mhpD	-	-	Q	ko:K02509	ko00350,ko01120,map00350,map01120	ko00000,ko00001,ko01000	hydratase
NMKPALMA_00178	1.88e-222	hdhL	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	Belongs to the LDH MDH superfamily
NMKPALMA_00179	1.17e-291	aadAT	-	-	EK	ko:K05825	ko00300,ko01100,ko01130,ko01210,map00300,map01100,map01130,map01210	ko00000,ko00001,ko01000	Aminotransferase, class I
NMKPALMA_00180	1.45e-214	ypuA	-	-	S	-	-	-	Protein of unknown function (DUF1002)
NMKPALMA_00181	5.69e-235	ansA	3.5.1.1	-	EJ	ko:K01424	ko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110	ko00000,ko00001,ko01000	L-asparaginase, type I
NMKPALMA_00182	1.54e-176	-	-	-	K	-	-	-	Transcriptional regulator
NMKPALMA_00183	7.79e-203	akr5f	1.1.1.346	-	S	ko:K06221	-	ko00000,ko01000	reductase
NMKPALMA_00184	2.76e-135	-	-	-	K	-	-	-	Transcriptional regulator C-terminal region
NMKPALMA_00185	1.21e-248	-	-	-	S	-	-	-	membrane
NMKPALMA_00186	7.12e-142	-	-	-	GM	-	-	-	NAD(P)H-binding
NMKPALMA_00187	1.38e-82	-	-	-	-	-	-	-	-
NMKPALMA_00188	2.72e-164	-	-	-	F	-	-	-	glutamine amidotransferase
NMKPALMA_00189	2.97e-255	-	2.7.7.65	-	T	ko:K02488	ko02020,ko04112,map02020,map04112	ko00000,ko00001,ko00002,ko01000,ko02022	GGDEF domain
NMKPALMA_00190	2.31e-154	-	-	-	T	-	-	-	Putative diguanylate phosphodiesterase
NMKPALMA_00191	0.0	asnS	6.1.1.22	-	J	ko:K01893	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Asparaginyl-tRNA synthetase
NMKPALMA_00192	4.99e-253	asnA	6.3.1.1	-	F	ko:K01914	ko00250,ko00460,ko01100,ko01110,ko01230,map00250,map00460,map01100,map01110,map01230	ko00000,ko00001,ko01000	aspartate--ammonia ligase
NMKPALMA_00193	4.58e-122	-	-	-	S	-	-	-	ECF transporter, substrate-specific component
NMKPALMA_00194	0.0	pepN	3.4.11.2	-	E	ko:K01256	ko00480,ko01100,map00480,map01100	ko00000,ko00001,ko01000,ko01002	aminopeptidase
NMKPALMA_00195	8.37e-145	-	-	-	GM	-	-	-	NAD dependent epimerase dehydratase family protein
NMKPALMA_00196	0.0	pepE	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	aminopeptidase
NMKPALMA_00197	1.26e-267	-	-	-	EGP	-	-	-	Major Facilitator Superfamily
NMKPALMA_00198	8.15e-301	-	-	-	-	-	-	-	-
NMKPALMA_00199	1.85e-108	-	-	-	K	-	-	-	Transcriptional regulator, HxlR family
NMKPALMA_00200	9.54e-140	XK27_02070	-	-	S	ko:K07078	-	ko00000	Nitroreductase family
NMKPALMA_00201	1.07e-66	ydeP	-	-	K	-	-	-	Transcriptional regulator, HxlR family
NMKPALMA_00202	6.4e-156	-	-	-	GM	-	-	-	NmrA-like family
NMKPALMA_00203	2.03e-96	-	-	-	S	ko:K02348	-	ko00000	Gnat family
NMKPALMA_00204	2.3e-52	-	-	-	S	-	-	-	Cytochrome B5
NMKPALMA_00205	8.47e-08	-	-	-	S	-	-	-	Cytochrome B5
NMKPALMA_00206	5.47e-55	-	-	-	S	-	-	-	Cytochrome B5
NMKPALMA_00207	4.79e-202	holA	2.7.7.7	-	L	ko:K02340	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III delta subunit
NMKPALMA_00208	0.0	comEC	-	-	S	ko:K02238	-	ko00000,ko00002,ko02044	Competence protein ComEC
NMKPALMA_00209	2.47e-116	comEB	3.5.4.12	-	F	ko:K01493	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko02044	ComE operon protein 2
NMKPALMA_00210	1.14e-136	comEA	-	-	L	ko:K02237	-	ko00000,ko00002,ko02044	Competence protein ComEA
NMKPALMA_00211	2.58e-253	lon	-	-	T	ko:K07177	ko02024,map02024	ko00000,ko00001,ko01002	Belongs to the peptidase S16 family
NMKPALMA_00212	3.05e-116	coaD	2.7.7.3	-	H	ko:K00954	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
NMKPALMA_00213	6.8e-129	rsmD	2.1.1.171	-	L	ko:K08316	-	ko00000,ko01000,ko03009	RNA methyltransferase, RsmD family
NMKPALMA_00214	4.49e-60	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2129)
NMKPALMA_00215	2.26e-285	ftsW	-	-	D	ko:K03588	ko04112,map04112	ko00000,ko00001,ko02000,ko03036	Belongs to the SEDS family
NMKPALMA_00216	0.0	typA	-	-	T	ko:K06207	-	ko00000	GTP-binding protein TypA
NMKPALMA_00217	4.1e-176	suhB	3.1.3.25	-	G	ko:K01092	ko00521,ko00562,ko01100,ko04070,map00521,map00562,map01100,map04070	ko00000,ko00001,ko00002,ko01000	Belongs to the inositol monophosphatase superfamily
NMKPALMA_00218	7.04e-63	yktA	-	-	S	-	-	-	Belongs to the UPF0223 family
NMKPALMA_00219	0.0	pdhD	1.8.1.4	-	C	ko:K00382	ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000,ko04147	Dehydrogenase
NMKPALMA_00220	2.59e-312	pdhC	2.3.1.12	-	C	ko:K00627	ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
NMKPALMA_00221	3.28e-232	pdhB	1.2.4.1	-	C	ko:K00162	ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04922,ko05230,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200,map04066,map04922,map05230	br01601,ko00000,ko00001,ko00002,ko01000	Transketolase, C-terminal domain protein
NMKPALMA_00222	9.95e-267	pdhA	1.2.4.1	-	C	ko:K00161	ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04922,ko05230,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200,map04066,map04922,map05230	br01601,ko00000,ko00001,ko00002,ko01000	Dehydrogenase E1 component
NMKPALMA_00223	1.96e-132	def	3.5.1.88	-	J	ko:K01462	-	ko00000,ko01000	Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
NMKPALMA_00224	4.45e-104	-	-	-	-	-	-	-	-
NMKPALMA_00225	9.99e-44	ykzG	-	-	S	-	-	-	Belongs to the UPF0356 family
NMKPALMA_00226	2.71e-235	-	-	-	I	-	-	-	Diacylglycerol kinase catalytic
NMKPALMA_00227	1.25e-38	-	-	-	-	-	-	-	-
NMKPALMA_00228	7.2e-225	-	-	-	M	ko:K21471	-	ko00000,ko01000,ko01002,ko01011	NlpC P60 family protein
NMKPALMA_00230	5.28e-76	-	-	-	-	-	-	-	-
NMKPALMA_00231	5.94e-262	glxK	2.7.1.165	-	G	ko:K00865	ko00260,ko00561,ko00630,ko01100,ko01120,ko01130,map00260,map00561,map00630,map01100,map01120,map01130	ko00000,ko00001,ko01000	Belongs to the glycerate kinase type-1 family
NMKPALMA_00232	7.41e-254	asd	1.2.1.11	-	E	ko:K00133	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
NMKPALMA_00233	1.19e-278	aspC	-	-	E	ko:K00841	ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase
NMKPALMA_00234	5.21e-180	dapB	1.17.1.8	-	E	ko:K00215	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
NMKPALMA_00235	1.61e-223	dapA	4.3.3.7	-	E	ko:K01714	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
NMKPALMA_00236	1.15e-283	hipO	3.5.1.47	-	E	ko:K05823	ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000,ko01002	Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
NMKPALMA_00237	2.18e-110	dapH	2.3.1.117, 2.3.1.89	-	E	ko:K00674,ko:K05822	ko00300,ko01100,ko01110,ko01120,ko01230,map00300,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
NMKPALMA_00238	0.0	lysA	4.1.1.20	-	E	ko:K01586	ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
NMKPALMA_00239	0.0	lysC	2.7.2.4	-	E	ko:K00928	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the aspartokinase family
NMKPALMA_00240	1.83e-233	dapF	5.1.1.7	-	E	ko:K01778	ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
NMKPALMA_00241	1.48e-223	prs2	2.7.6.1	-	F	ko:K00948	ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
NMKPALMA_00242	0.0	recD2	3.1.11.5	-	L	ko:K03581	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
NMKPALMA_00243	3.82e-157	-	-	-	S	-	-	-	repeat protein
NMKPALMA_00244	1.64e-158	pgm6	-	-	G	-	-	-	phosphoglycerate mutase
NMKPALMA_00245	1.53e-276	mnmA	2.8.1.13	-	J	ko:K00566	ko04122,map04122	ko00000,ko00001,ko01000,ko03016	Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
NMKPALMA_00246	2.27e-75	XK27_04120	-	-	S	-	-	-	Putative amino acid metabolism
NMKPALMA_00247	3.68e-277	iscS	2.8.1.7	-	E	ko:K04487	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko02048,ko03016,ko03029	Aminotransferase class V
NMKPALMA_00248	3.4e-162	mtnN	3.2.2.9	-	E	ko:K01243	ko00270,ko01100,ko01230,map00270,map01100,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
NMKPALMA_00249	7.05e-23	-	-	-	-	-	-	-	-
NMKPALMA_00250	4.81e-127	nudF	3.6.1.13	-	L	ko:K01515	ko00230,map00230	ko00000,ko00001,ko01000	ADP-ribose pyrophosphatase
NMKPALMA_00251	5.69e-44	cspB	-	-	K	ko:K03704	-	ko00000,ko03000	Cold shock protein
NMKPALMA_00252	0.0	ileS	6.1.1.5	-	J	ko:K01870	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
NMKPALMA_00253	3.28e-103	divIVA	-	-	D	ko:K04074	-	ko00000,ko03036	DivIVA domain protein
NMKPALMA_00254	2.61e-190	ylmH	-	-	S	-	-	-	S4 domain protein
NMKPALMA_00255	3.2e-54	ylmG	-	-	S	ko:K02221	-	ko00000,ko02044	YGGT family
NMKPALMA_00256	1.11e-92	sepF	-	-	D	ko:K09772	-	ko00000,ko03036	Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
NMKPALMA_00257	1.08e-287	ftsZ	-	-	D	ko:K03531	ko04112,map04112	ko00000,ko00001,ko02048,ko03036,ko04812	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
NMKPALMA_00258	0.0	ftsA	-	-	D	ko:K03590	ko04112,map04112	ko00000,ko00001,ko03036,ko04812	Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
NMKPALMA_00259	1.16e-183	divIB	-	-	D	ko:K03589	ko04112,map04112	ko00000,ko00001,ko03036	Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
NMKPALMA_00260	9.81e-259	murG	2.4.1.227	GT28	M	ko:K02563	ko00550,ko01100,ko01502,ko04112,map00550,map01100,map01502,map04112	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
NMKPALMA_00261	0.0	murD	6.3.2.9	-	M	ko:K01925	ko00471,ko00550,ko01100,map00471,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
NMKPALMA_00262	3.83e-230	mraY	2.7.8.13	-	M	ko:K01000	ko00550,ko01100,ko01502,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
NMKPALMA_00263	0.0	pbpX	-	-	M	ko:K08724,ko:K12552,ko:K12556	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01011	Penicillin-binding Protein
NMKPALMA_00264	5.99e-74	ftsL	-	-	D	-	-	-	Cell division protein FtsL
NMKPALMA_00265	1.54e-222	rsmH	2.1.1.199	-	J	ko:K03438	-	ko00000,ko01000,ko03009	Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
NMKPALMA_00266	3.53e-100	mraZ	-	-	K	ko:K03925	-	ko00000	Belongs to the MraZ family
NMKPALMA_00267	6.9e-77	-	-	-	-	-	-	-	-
NMKPALMA_00268	4.47e-16	-	-	-	S	-	-	-	Protein of unknown function (DUF4044)
NMKPALMA_00269	0.0	ftsK	-	-	D	ko:K03466	-	ko00000,ko03036	Belongs to the FtsK SpoIIIE SftA family
NMKPALMA_00270	2.64e-124	cspR	2.1.1.207	-	J	ko:K03216	-	ko00000,ko01000,ko03016	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
NMKPALMA_00271	9.52e-205	rrmA	2.1.1.187	-	H	ko:K00563,ko:K10947	-	ko00000,ko01000,ko03000,ko03009	Methyltransferase
NMKPALMA_00272	2.29e-252	pgl	3.1.1.31	-	G	ko:K07404	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Lactonase, 7-bladed beta-propeller
NMKPALMA_00273	0.0	-	-	-	L	ko:K07484	-	ko00000	Transposase IS66 family
NMKPALMA_00274	3.81e-88	XK27_01125	-	-	L	ko:K07484	-	ko00000	PFAM IS66 Orf2 family protein
NMKPALMA_00275	0.0	-	-	-	L	-	-	-	Transposase
NMKPALMA_00276	1.44e-47	rpsT	-	-	J	ko:K02968	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 16S ribosomal RNA
NMKPALMA_00277	1.74e-57	rpsO	-	-	J	ko:K02956	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
NMKPALMA_00278	0.0	rnjB	-	-	J	ko:K12574	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
NMKPALMA_00279	5.09e-208	-	-	-	S	-	-	-	Tetratricopeptide repeat
NMKPALMA_00280	4.94e-288	tuf	-	-	J	ko:K02358,ko:K15771	ko02010,map02010	ko00000,ko00001,ko00002,ko02000,ko03012,ko03029,ko04147	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
NMKPALMA_00281	5.54e-303	tig	-	-	D	ko:K03545	-	ko00000	Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
NMKPALMA_00282	2.06e-297	clpX	-	-	O	ko:K03544	ko04112,map04112	ko00000,ko00001,ko03110	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
NMKPALMA_00283	2.01e-139	engB	-	-	D	ko:K03978	-	ko00000,ko03036	Necessary for normal cell division and for the maintenance of normal septation
NMKPALMA_00284	1.11e-78	-	-	-	S	-	-	-	mazG nucleotide pyrophosphohydrolase
NMKPALMA_00285	2.44e-20	-	-	-	-	-	-	-	-
NMKPALMA_00286	0.0	uvrC	-	-	L	ko:K03703	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
NMKPALMA_00287	1.9e-316	obg	-	-	S	ko:K03979	-	ko00000,ko01000,ko03009	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
NMKPALMA_00288	9.73e-226	rnz	3.1.26.11	-	J	ko:K00784	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
NMKPALMA_00289	3.87e-200	fabG	1.1.1.100	-	S	ko:K00059,ko:K07124	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Belongs to the short-chain dehydrogenases reductases (SDR) family
NMKPALMA_00290	0.0	recJ	-	-	L	ko:K07462	ko03410,ko03430,ko03440,map03410,map03430,map03440	ko00000,ko00001,ko01000,ko03400	Single-stranded-DNA-specific exonuclease RecJ
NMKPALMA_00291	1.25e-119	apt	2.4.2.7	-	F	ko:K00759	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000,ko04147	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
NMKPALMA_00292	1.53e-122	-	-	-	-	-	-	-	-
NMKPALMA_00294	1.2e-162	rnhA	3.1.26.4	-	L	ko:K03469	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
NMKPALMA_00295	7.06e-271	mvaS	2.3.3.10	-	I	ko:K01641	ko00072,ko00280,ko00650,ko00900,ko01100,ko01110,ko01130,map00072,map00280,map00650,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Hydroxymethylglutaryl-CoA synthase
NMKPALMA_00296	0.0	lacL	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 2 family
NMKPALMA_00297	1.92e-237	lacM	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	beta-galactosidase
NMKPALMA_00298	0.0	-	-	-	S	-	-	-	Bacterial membrane protein, YfhO
NMKPALMA_00299	4.32e-172	gpmA1	5.4.2.11	-	G	ko:K01834	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
NMKPALMA_00300	2.55e-215	-	-	-	I	-	-	-	alpha/beta hydrolase fold
NMKPALMA_00301	9e-276	mccB	4.4.1.1, 4.4.1.2, 4.4.1.8	-	E	ko:K01760,ko:K17217	ko00260,ko00270,ko00450,ko00920,ko01100,ko01110,ko01130,ko01230,map00260,map00270,map00450,map00920,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	cystathionine
NMKPALMA_00302	3.36e-154	tcyB	-	-	E	ko:K10009	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
NMKPALMA_00303	1.67e-171	-	-	-	E	ko:K10010	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
NMKPALMA_00304	2.47e-180	tcyA	-	-	ET	ko:K02424	ko02010,map02010	ko00000,ko00001,ko00002,ko02000,ko02035	Belongs to the bacterial solute-binding protein 3 family
NMKPALMA_00305	0.0	pepC	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	Peptidase C1-like family
NMKPALMA_00306	3.41e-160	rpiA	5.3.1.6	-	G	ko:K01807	ko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
NMKPALMA_00307	4.04e-67	yjdJ	-	-	S	ko:K06975	-	ko00000	GCN5-related N-acetyl-transferase
NMKPALMA_00308	1.39e-128	dut	3.6.1.23	-	F	ko:K01520	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	dUTP diphosphatase
NMKPALMA_00309	0.0	radA	-	-	O	ko:K04485	-	ko00000,ko03400	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
NMKPALMA_00310	2.33e-262	yacL	-	-	S	-	-	-	domain protein
NMKPALMA_00311	0.0	cysS	6.1.1.16	-	J	ko:K01883	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-I aminoacyl-tRNA synthetase family
NMKPALMA_00312	5.09e-93	mrnC	-	-	J	ko:K11145	-	ko00000,ko01000,ko03009	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
NMKPALMA_00313	1.82e-175	trmH	2.1.1.185	-	J	ko:K03218	-	ko00000,ko01000,ko03009	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
NMKPALMA_00314	9.18e-31	rpmG	-	-	J	ko:K02913	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL33 family
NMKPALMA_00315	7.11e-32	secE	-	-	U	ko:K03073	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
NMKPALMA_00316	1.1e-126	nusG	-	-	K	ko:K02601	-	ko00000,ko03009,ko03021	Participates in transcription elongation, termination and antitermination
NMKPALMA_00317	1.39e-92	rplK	-	-	J	ko:K02867	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
NMKPALMA_00318	8.31e-158	rplA	-	-	J	ko:K02863	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
NMKPALMA_00319	1.12e-289	aadAT	-	-	EK	ko:K05825	ko00300,ko01100,ko01130,ko01210,map00300,map01100,map01130,map01210	ko00000,ko00001,ko01000	Aminotransferase, class I
NMKPALMA_00321	1.19e-314	-	-	-	M	-	-	-	Glycosyl transferase family group 2
NMKPALMA_00322	1.47e-266	mnaA	5.1.3.14	-	G	ko:K01791	ko00520,ko01100,ko05111,map00520,map01100,map05111	ko00000,ko00001,ko00002,ko01000,ko01005	Belongs to the UDP-N-acetylglucosamine 2-epimerase family
NMKPALMA_00323	3.6e-107	rplJ	-	-	J	ko:K02864	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
NMKPALMA_00324	2.46e-72	rplL	-	-	J	ko:K02935	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
NMKPALMA_00325	8.34e-65	-	-	-	-	-	-	-	-
NMKPALMA_00327	2.94e-65	mscL	-	-	M	ko:K03282	-	ko00000,ko02000	Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
NMKPALMA_00328	1.38e-75	XK27_06915	-	-	K	ko:K10947	-	ko00000,ko03000	transcriptional regulator PadR family
NMKPALMA_00329	2.11e-124	-	-	-	S	-	-	-	Protein of unknown function (DUF1700)
NMKPALMA_00330	1.52e-161	-	-	-	S	ko:K11621	ko02020,map02020	ko00000,ko00001	Putative adhesin
NMKPALMA_00331	0.0	adhE	1.1.1.1, 1.2.1.10	-	C	ko:K04072	ko00010,ko00071,ko00350,ko00620,ko00625,ko00626,ko00650,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00620,map00625,map00626,map00650,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	belongs to the iron- containing alcohol dehydrogenase family
NMKPALMA_00332	9.35e-255	nrdF	1.17.4.1	-	F	ko:K00526	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
NMKPALMA_00333	0.0	nrdE	1.17.4.1	-	F	ko:K00525	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
NMKPALMA_00334	9.33e-48	nrdH	-	-	O	ko:K06191	-	ko00000	Glutaredoxin
NMKPALMA_00335	6.21e-119	tadA	3.5.4.33	-	F	ko:K11991	-	ko00000,ko01000,ko03016	Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
NMKPALMA_00336	0.0	dnaX	2.7.7.7	-	L	ko:K02343	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
NMKPALMA_00337	5.87e-62	yaaK	-	-	S	ko:K09747	-	ko00000	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
NMKPALMA_00338	4.92e-142	recR	-	-	L	ko:K06187	ko03440,map03440	ko00000,ko00001,ko03400	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
NMKPALMA_00339	4.67e-52	-	-	-	S	-	-	-	Protein of unknown function (DUF2508)
NMKPALMA_00340	6.4e-149	tmk	2.7.4.9	-	F	ko:K00943	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
NMKPALMA_00341	2.83e-69	yaaQ	-	-	S	-	-	-	Cyclic-di-AMP receptor
NMKPALMA_00342	3.7e-235	holB	2.7.7.7	-	L	ko:K02341	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III
NMKPALMA_00343	3.71e-76	yabA	-	-	L	-	-	-	Involved in initiation control of chromosome replication
NMKPALMA_00344	4.69e-202	rsmI	2.1.1.198	-	H	ko:K07056	-	ko00000,ko01000,ko03009	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
NMKPALMA_00345	2.21e-178	fat	3.1.2.21	-	I	ko:K01071	ko00061,ko01100,map00061,map01100	ko00000,ko00001,ko01000,ko01004	Acyl-ACP thioesterase
NMKPALMA_00346	0.0	ppx3	3.6.1.11, 3.6.1.40	-	FP	ko:K01524	ko00230,map00230	ko00000,ko00001,ko01000	exopolyphosphatase
NMKPALMA_00347	0.0	ppk	2.7.4.1	-	P	ko:K00937	ko00190,ko03018,map00190,map03018	ko00000,ko00001,ko01000,ko03019	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
NMKPALMA_00348	5.83e-225	ppx	3.6.1.11, 3.6.1.40	-	FP	ko:K01524	ko00230,map00230	ko00000,ko00001,ko01000	exopolyphosphatase
NMKPALMA_00349	1.48e-247	galE	5.1.3.2	-	M	ko:K01784	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the NAD(P)-dependent epimerase dehydratase family
NMKPALMA_00350	2.04e-168	yeaZ	2.3.1.234	-	O	ko:K01409,ko:K14742	-	ko00000,ko01000,ko03016	Universal bacterial protein YeaZ
NMKPALMA_00351	3.02e-135	rimI	2.3.1.128	-	K	ko:K03789	-	ko00000,ko01000,ko03009	Ribosomal-protein-alanine acetyltransferase
NMKPALMA_00352	1.43e-251	tsaD	2.3.1.234	-	J	ko:K01409	-	ko00000,ko01000,ko03016	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
NMKPALMA_00353	3.1e-171	proC	1.5.1.2	-	E	ko:K00286	ko00330,ko01100,ko01110,ko01130,ko01230,map00330,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
NMKPALMA_00354	2.11e-289	proA	1.2.1.41	-	E	ko:K00147	ko00330,ko00332,ko01100,ko01110,ko01130,ko01230,map00330,map00332,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
NMKPALMA_00355	1.55e-178	proB	2.7.2.11	-	F	ko:K00931	ko00330,ko00332,ko01100,ko01130,ko01230,map00330,map00332,map01100,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
NMKPALMA_00356	3.82e-183	mtnU	3.5.1.3	-	S	ko:K13566	ko00250,map00250	ko00000,ko00001,ko01000	Carbon-nitrogen hydrolase
NMKPALMA_00357	1.53e-289	mtnE	-	-	E	ko:K08969	ko00270,ko01100,map00270,map01100	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase
NMKPALMA_00358	2.51e-234	ykpB	1.1.1.169	-	H	ko:K00077	ko00770,ko01100,ko01110,map00770,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
NMKPALMA_00359	0.0	ydiF	-	-	S	ko:K06158	-	ko00000,ko03012	ABC transporter, ATP-binding protein
NMKPALMA_00360	4.67e-147	rex	-	-	K	ko:K01926	-	ko00000,ko03000	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
NMKPALMA_00361	1.83e-59	groS	-	-	O	ko:K04078	-	ko00000,ko03029,ko03110	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
NMKPALMA_00362	0.0	groL	-	-	O	ko:K04077	ko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
NMKPALMA_00363	1.89e-79	-	-	-	S	ko:K19055	-	ko00000,ko01000,ko03016	Aminoacyl-tRNA editing domain
NMKPALMA_00364	0.0	-	-	-	E	-	-	-	amino acid
NMKPALMA_00365	0.0	ydaO	-	-	E	-	-	-	amino acid
NMKPALMA_00366	1.53e-52	-	-	-	-	-	-	-	-
NMKPALMA_00367	1.46e-87	-	-	-	K	-	-	-	Transcriptional regulator
NMKPALMA_00368	3.64e-76	-	-	-	EGP	-	-	-	Major Facilitator
NMKPALMA_00369	6.03e-98	-	-	-	EGP	-	-	-	Major Facilitator
NMKPALMA_00370	7.45e-142	yvyE	3.4.13.9	-	S	ko:K01271	-	ko00000,ko01000,ko01002	YigZ family
NMKPALMA_00371	0.0	comFA	-	-	L	ko:K02240	-	ko00000,ko00002,ko02044	Helicase C-terminal domain protein
NMKPALMA_00372	2.13e-158	comFC	-	-	S	ko:K02242	-	ko00000,ko00002,ko02044	Competence protein
NMKPALMA_00373	3.01e-125	hpf	-	-	J	ko:K05808	-	ko00000,ko03009	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
NMKPALMA_00374	0.0	secA	-	-	U	ko:K03070	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
NMKPALMA_00375	7.5e-237	prfB	-	-	J	ko:K02836	-	ko00000,ko03012	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
NMKPALMA_00376	3.65e-67	-	-	-	KT	ko:K03973	-	ko00000,ko02048,ko03000	PspC domain protein
NMKPALMA_00377	1.88e-68	yvlD	-	-	S	ko:K08972	-	ko00000	Mycobacterial 4 TMS phage holin, superfamily IV
NMKPALMA_00378	2.79e-226	hprK	-	-	F	ko:K06023	-	ko00000,ko01000	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
NMKPALMA_00379	1.11e-198	lgt	-	-	M	ko:K13292	-	ko00000,ko01000	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
NMKPALMA_00380	2.7e-233	gpsA	1.1.1.94	-	I	ko:K00057	ko00564,ko01110,map00564,map01110	ko00000,ko00001,ko01000	Glycerol-3-phosphate dehydrogenase
NMKPALMA_00381	1.08e-215	galU	2.7.7.9	-	M	ko:K00963	ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	UTP-glucose-1-phosphate uridylyltransferase
NMKPALMA_00382	4.49e-178	lutC	-	-	S	ko:K00782	-	ko00000	LUD domain
NMKPALMA_00383	0.0	lutB	-	-	C	ko:K18929	-	ko00000	4Fe-4S dicluster domain
NMKPALMA_00384	2.76e-215	lutA	-	-	C	ko:K18928	-	ko00000	Cysteine-rich domain
NMKPALMA_00385	9.67e-222	trxB	1.8.1.9	-	C	ko:K00384	ko00450,map00450	ko00000,ko00001,ko01000	Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
NMKPALMA_00386	1.75e-257	-	3.5.1.18	-	E	ko:K01439	ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000	succinyl-diaminopimelate desuccinylase
NMKPALMA_00387	8.13e-206	-	-	-	ET	ko:K02030	-	ko00000,ko00002,ko02000	PFAM extracellular solute-binding protein, family 3
NMKPALMA_00388	9.93e-115	ykhA	3.1.2.20	-	I	ko:K01073	-	ko00000,ko01000	Thioesterase superfamily
NMKPALMA_00389	0.0	pgm	5.4.2.2	-	G	ko:K01835	ko00010,ko00030,ko00052,ko00230,ko00500,ko00520,ko00521,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00052,map00230,map00500,map00520,map00521,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
NMKPALMA_00390	4.17e-149	yfbR	-	-	S	ko:K07023	-	ko00000	HD containing hydrolase-like enzyme
NMKPALMA_00391	1.03e-19	-	-	-	-	-	-	-	-
NMKPALMA_00392	0.0	uvrB	-	-	L	ko:K03702	ko03420,map03420	ko00000,ko00001,ko03400	damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
NMKPALMA_00393	0.0	uvrA	-	-	L	ko:K03701	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
NMKPALMA_00394	9.18e-317	steT	-	-	E	ko:K03294	-	ko00000	amino acid
NMKPALMA_00395	2.69e-206	yvcJ	-	-	S	ko:K06958	-	ko00000,ko03019	Displays ATPase and GTPase activities
NMKPALMA_00396	6.97e-240	yvcK	-	-	S	-	-	-	Required for morphogenesis under gluconeogenic growth conditions
NMKPALMA_00397	1.37e-218	whiA	-	-	K	ko:K09762	-	ko00000	May be required for sporulation
NMKPALMA_00399	1.83e-21	-	-	-	-	-	-	-	-
NMKPALMA_00400	1.6e-305	glpT	-	-	G	ko:K02445	-	ko00000,ko02000	Major Facilitator Superfamily
NMKPALMA_00401	4.72e-134	clpP	3.4.21.92	-	O	ko:K01358	ko04112,ko04212,map04112,map04212	ko00000,ko00001,ko01000,ko01002	Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
NMKPALMA_00403	1.31e-243	gap	1.2.1.12	-	G	ko:K00134	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
NMKPALMA_00404	7.62e-290	pgk	2.7.2.3	-	F	ko:K00927	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the phosphoglycerate kinase family
NMKPALMA_00405	3.56e-182	tpiA	5.3.1.1	-	G	ko:K01803	ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
NMKPALMA_00406	0.0	eno	4.2.1.11	-	G	ko:K01689	ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066	ko00000,ko00001,ko00002,ko01000,ko03019,ko04147	Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
NMKPALMA_00407	0.0	yifK	-	-	E	ko:K03293	-	ko00000	Amino acid permease
NMKPALMA_00408	0.0	eriC	-	-	P	ko:K03281	-	ko00000	chloride
NMKPALMA_00409	1.43e-47	secG	-	-	U	ko:K03075	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Preprotein translocase
NMKPALMA_00410	2.82e-188	est	3.1.1.1	-	S	ko:K03928	-	ko00000,ko01000	Serine aminopeptidase, S33
NMKPALMA_00411	0.0	rnr	-	-	J	ko:K12573	ko03018,map03018	ko00000,ko00001,ko01000,ko03016,ko03019	3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
NMKPALMA_00412	7.73e-109	smpB	-	-	J	ko:K03664	-	ko00000	the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
NMKPALMA_00413	9.61e-137	-	-	-	-	-	-	-	-
NMKPALMA_00414	1.84e-174	ung	3.2.2.27	-	L	ko:K03648	ko03410,ko05340,map03410,map05340	ko00000,ko00001,ko01000,ko03400	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
NMKPALMA_00415	2.29e-227	pta	2.3.1.8, 3.6.3.21	-	C	ko:K00625,ko:K02028	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000,ko02000	phosphate acetyltransferase
NMKPALMA_00416	6.95e-105	ydiB	-	-	O	ko:K06925	-	ko00000,ko03016	Hydrolase, P-loop family
NMKPALMA_00417	4.19e-112	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
NMKPALMA_00418	5.05e-99	XK27_04775	-	-	S	ko:K09155	-	ko00000	PAS domain
NMKPALMA_00419	2.5e-131	dnaQ	2.7.7.7	-	L	ko:K02342	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III
NMKPALMA_00420	6.5e-214	murB	1.3.1.98	-	M	ko:K00075	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation
NMKPALMA_00421	1.78e-211	rbsK	2.7.1.15	-	H	ko:K00852	ko00030,map00030	ko00000,ko00001,ko01000	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
NMKPALMA_00422	1.01e-87	rbsD	5.4.99.62	-	G	ko:K06726	ko02010,map02010	ko00000,ko00001,ko01000	Catalyzes the interconversion of beta-pyran and beta- furan forms of D-ribose
NMKPALMA_00423	0.0	fucP	-	-	G	ko:K02429	-	ko00000,ko02000	Major Facilitator Superfamily
NMKPALMA_00424	6.61e-195	dacA	2.7.7.85	-	S	ko:K18672	-	ko00000,ko01000	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
NMKPALMA_00425	3.69e-163	ybbR	-	-	S	-	-	-	YbbR-like protein
NMKPALMA_00426	0.0	glmM	5.4.2.10	-	G	ko:K03431	ko00520,ko01100,ko01130,map00520,map01100,map01130	ko00000,ko00001,ko01000	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
NMKPALMA_00427	0.0	glmS	2.6.1.16	-	M	ko:K00820	ko00250,ko00520,ko01100,ko01130,ko04931,map00250,map00520,map01100,map01130,map04931	ko00000,ko00001,ko01000,ko01002	Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
NMKPALMA_00428	3e-69	-	-	-	-	-	-	-	-
NMKPALMA_00429	0.0	oatA	-	-	I	-	-	-	Acyltransferase
NMKPALMA_00430	6.2e-103	-	-	-	K	-	-	-	Transcriptional regulator
NMKPALMA_00431	5.46e-191	-	-	-	S	-	-	-	Cof-like hydrolase
NMKPALMA_00432	1.27e-109	lytE	-	-	M	-	-	-	Lysin motif
NMKPALMA_00434	2.81e-174	yclJ	-	-	K	ko:K02483	-	ko00000,ko02022	response regulator
NMKPALMA_00435	0.0	yclK	-	-	T	-	-	-	Histidine kinase
NMKPALMA_00436	1.29e-198	-	-	-	U	ko:K05340	-	ko00000,ko02000	sugar transport
NMKPALMA_00437	2.96e-145	maa3	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	transferase hexapeptide repeat
NMKPALMA_00438	0.0	pgi	5.3.1.9	-	G	ko:K01810	ko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the GPI family
NMKPALMA_00439	3.54e-39	-	-	-	-	-	-	-	-
NMKPALMA_00440	1.5e-276	xylR	-	-	GK	-	-	-	ROK family
NMKPALMA_00442	3.17e-227	xylT	-	-	EGP	-	-	-	Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family
NMKPALMA_00443	6.65e-68	xylT	-	-	EGP	-	-	-	Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family
NMKPALMA_00444	3.65e-222	rhaS2	-	-	K	-	-	-	Transcriptional regulator, AraC family
NMKPALMA_00445	0.0	-	-	-	G	ko:K03292	-	ko00000	MFS/sugar transport protein
NMKPALMA_00446	0.0	-	-	-	G	-	-	-	Right handed beta helix region
NMKPALMA_00447	8.8e-17	yjeA	3.5.1.104	-	G	ko:K22278	-	ko00000,ko01000	polysaccharide deacetylase
NMKPALMA_00448	0.0	xylA	5.3.1.5	-	G	ko:K01805	ko00040,ko00051,ko01100,map00040,map00051,map01100	ko00000,ko00001,ko01000	Belongs to the xylose isomerase family
NMKPALMA_00449	0.0	xylB	2.7.1.17, 2.7.1.53	-	G	ko:K00854,ko:K00880	ko00040,ko00053,ko01100,map00040,map00053,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the FGGY kinase family
NMKPALMA_00450	1.06e-198	-	-	-	KT	ko:K07719	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	YcbB domain
NMKPALMA_00451	2.64e-243	argF	2.1.3.3	-	E	ko:K00611	ko00220,ko01100,ko01110,ko01130,ko01230,map00220,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
NMKPALMA_00452	4.6e-220	arcC	2.7.2.2	-	E	ko:K00926	ko00220,ko00230,ko00910,ko01100,ko01120,ko01200,map00220,map00230,map00910,map01100,map01120,map01200	ko00000,ko00001,ko01000	Belongs to the carbamate kinase family
NMKPALMA_00453	1.84e-207	-	-	-	EG	-	-	-	EamA-like transporter family
NMKPALMA_00454	1.72e-134	XK27_08875	-	-	O	-	-	-	PFAM peptidase M10A and M12B, matrixin and adamalysin
NMKPALMA_00455	1.6e-82	-	-	-	S	-	-	-	Cupredoxin-like domain
NMKPALMA_00456	8.97e-65	-	-	-	S	-	-	-	Cupredoxin-like domain
NMKPALMA_00457	0.0	copA	3.6.3.3, 3.6.3.5, 3.6.3.54	-	P	ko:K01534,ko:K17686	ko01524,ko04016,map01524,map04016	ko00000,ko00001,ko01000	P-type ATPase
NMKPALMA_00458	1.33e-114	-	-	-	-	-	-	-	-
NMKPALMA_00460	1.28e-75	-	-	-	-	-	-	-	-
NMKPALMA_00461	8.25e-45	nhaP3	-	-	P	ko:K03316	-	ko00000	Sodium proton antiporter
NMKPALMA_00465	7.93e-07	-	-	-	-	-	-	-	-
NMKPALMA_00467	1.73e-89	-	-	-	-	-	-	-	-
NMKPALMA_00469	1.05e-12	-	-	-	L	-	-	-	DnaD domain protein
NMKPALMA_00475	5.44e-07	-	-	-	S	-	-	-	Helix-turn-helix domain
NMKPALMA_00476	7.33e-57	-	-	-	K	-	-	-	COG3617 Prophage antirepressor
NMKPALMA_00477	9.81e-45	-	-	-	-	-	-	-	-
NMKPALMA_00479	2.96e-12	xre	-	-	K	-	-	-	sequence-specific DNA binding
NMKPALMA_00480	3.05e-170	int2	-	-	L	-	-	-	Belongs to the 'phage' integrase family
NMKPALMA_00481	5.35e-122	-	-	-	-	-	-	-	-
NMKPALMA_00482	0.0	-	-	-	M	-	-	-	domain protein
NMKPALMA_00483	1.65e-74	-	-	-	-	-	-	-	-
NMKPALMA_00484	7.8e-238	ampC	-	-	V	-	-	-	Beta-lactamase
NMKPALMA_00485	2.95e-303	arcA	3.5.3.6	-	E	ko:K01478	ko00220,ko01100,ko01110,ko01130,map00220,map01100,map01110,map01130	ko00000,ko00001,ko01000	Arginine
NMKPALMA_00486	6.17e-104	argR	-	-	K	ko:K03402	-	ko00000,ko03000	Regulates arginine biosynthesis genes
NMKPALMA_00487	0.0	arcD	-	-	E	ko:K03758	-	ko00000,ko02000	Arginine ornithine antiporter
NMKPALMA_00488	1.61e-296	potE	-	-	U	ko:K03756,ko:K03758	-	ko00000,ko02000	Amino acid permease
NMKPALMA_00490	6.91e-173	-	-	-	S	ko:K07009	-	ko00000	CobB/CobQ-like glutamine amidotransferase domain
NMKPALMA_00491	0.0	murE2	6.3.2.13	-	M	ko:K01928	ko00300,ko00550,map00300,map00550	ko00000,ko00001,ko01000,ko01011	Mur ligase, middle domain
NMKPALMA_00492	6.8e-140	tdk	2.7.1.21	-	F	ko:K00857	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	thymidine kinase
NMKPALMA_00493	1.73e-248	prfA	-	-	J	ko:K02835	-	ko00000,ko03012	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
NMKPALMA_00494	8.55e-214	prmC	2.1.1.297	-	J	ko:K02493	-	ko00000,ko01000,ko03012	Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
NMKPALMA_00495	7.35e-249	ywlC	2.7.7.87	-	J	ko:K07566	-	ko00000,ko01000,ko03009,ko03016	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
NMKPALMA_00496	1.33e-295	glyA	2.1.2.1	-	E	ko:K00600	ko00260,ko00460,ko00630,ko00670,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko01523,map00260,map00460,map00630,map00670,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map01523	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
NMKPALMA_00497	6.68e-150	upp	2.4.2.9	-	F	ko:K00761	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
NMKPALMA_00498	0.0	ptsI	2.7.3.9	-	G	ko:K08483	ko02060,map02060	ko00000,ko00001,ko01000,ko02000	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
NMKPALMA_00499	3.18e-244	yibE	-	-	S	-	-	-	overlaps another CDS with the same product name
NMKPALMA_00500	4.71e-166	yibF	-	-	S	-	-	-	overlaps another CDS with the same product name
NMKPALMA_00501	9.76e-295	pyrP	-	-	F	ko:K02824	-	ko00000,ko02000	Permease
NMKPALMA_00502	4.63e-162	atpB	-	-	C	ko:K02108	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko03110	it plays a direct role in the translocation of protons across the membrane
NMKPALMA_00503	1.26e-29	atpE	-	-	C	ko:K02110	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
NMKPALMA_00504	1.07e-95	atpF	-	-	C	ko:K02109	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
NMKPALMA_00505	1.14e-119	atpH	-	-	C	ko:K02113	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
NMKPALMA_00506	0.0	atpA	3.6.3.14	-	C	ko:K02111	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko01000	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
NMKPALMA_00507	7.51e-212	atpG	-	-	C	ko:K02115	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
NMKPALMA_00508	0.0	atpD	3.6.3.14	-	C	ko:K02112	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko01000	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
NMKPALMA_00509	7.36e-89	atpC	-	-	C	ko:K02114	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Produces ATP from ADP in the presence of a proton gradient across the membrane
NMKPALMA_00510	1.76e-45	ywzB	-	-	S	-	-	-	Protein of unknown function (DUF1146)
NMKPALMA_00511	4.26e-308	murA	2.5.1.7	-	M	ko:K00790	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
NMKPALMA_00512	2.57e-227	mbl	-	-	D	ko:K03569	-	ko00000,ko02048,ko03036,ko04812	Cell shape determining protein MreB Mrl
NMKPALMA_00513	4.61e-44	-	-	-	S	-	-	-	Protein of unknown function (DUF2969)
NMKPALMA_00514	9.49e-282	rodA	-	-	D	ko:K05837	-	ko00000,ko03036	Belongs to the SEDS family
NMKPALMA_00515	8.55e-64	gcsH2	-	-	E	ko:K02437	ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200	ko00000,ko00001,ko00002	glycine cleavage
NMKPALMA_00516	2.21e-275	ddl	6.3.2.4	-	F	ko:K01921	ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Belongs to the D-alanine--D-alanine ligase family
NMKPALMA_00517	4.46e-192	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
NMKPALMA_00518	0.0	araP	-	-	U	-	-	-	Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family
NMKPALMA_00519	0.0	araB	2.7.1.16	-	G	ko:K00853	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko01000	carbohydrate kinase FGGY
NMKPALMA_00520	1.91e-178	araD	5.1.3.4	-	G	ko:K03077	ko00040,ko00053,ko01100,ko01120,map00040,map00053,map01100,map01120	ko00000,ko00001,ko00002,ko01000	links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source
NMKPALMA_00521	0.0	araA	5.3.1.4	-	G	ko:K01804	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko01000	Catalyzes the conversion of L-arabinose to L-ribulose
NMKPALMA_00522	2.11e-133	maa	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	Maltose O-acetyltransferase
NMKPALMA_00523	2.32e-198	yvgN	-	-	S	-	-	-	Aldo keto reductase
NMKPALMA_00524	8.09e-260	araR	-	-	K	ko:K02103	-	ko00000,ko03000	Transcriptional regulator
NMKPALMA_00525	1.95e-109	uspA	-	-	T	-	-	-	universal stress protein
NMKPALMA_00526	3.61e-61	-	-	-	-	-	-	-	-
NMKPALMA_00527	1.88e-309	rarA	-	-	L	ko:K07478	-	ko00000	recombination factor protein RarA
NMKPALMA_00528	4.1e-111	XK27_05190	-	-	S	-	-	-	Protein of unknown function (DUF1694)
NMKPALMA_00529	9.79e-29	-	-	-	-	-	-	-	-
NMKPALMA_00530	2e-98	-	4.4.1.5	-	E	ko:K01759	ko00620,map00620	ko00000,ko00001,ko01000	Glyoxalase
NMKPALMA_00531	4.85e-179	-	-	-	S	-	-	-	Membrane
NMKPALMA_00532	1.24e-182	-	-	-	S	ko:K09861	-	ko00000	Belongs to the UPF0246 family
NMKPALMA_00533	0.0	spxB	1.2.3.3, 1.2.5.1, 2.2.1.6, 4.1.1.8	-	EH	ko:K00156,ko:K00158,ko:K01577,ko:K01652	ko00290,ko00620,ko00630,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00620,map00630,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the TPP enzyme family
NMKPALMA_00534	0.0	frc	2.8.3.16	-	C	ko:K07749	-	ko00000,ko01000	Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
NMKPALMA_00535	2.12e-301	pbuG	-	-	S	ko:K06901	-	ko00000,ko02000	permease
NMKPALMA_00536	0.0	gadB	4.1.1.15, 4.1.2.27	-	E	ko:K01580,ko:K01634	ko00250,ko00410,ko00430,ko00600,ko00650,ko01100,ko01110,ko01120,ko02024,ko04071,ko04727,ko04940,map00250,map00410,map00430,map00600,map00650,map01100,map01110,map01120,map02024,map04071,map04727,map04940	ko00000,ko00001,ko00002,ko01000	Belongs to the group II decarboxylase family
NMKPALMA_00537	0.0	gadC	-	-	E	ko:K20265	ko02024,map02024	ko00000,ko00001,ko02000	amino acid
NMKPALMA_00538	0.0	-	-	-	L	-	-	-	Transposase
NMKPALMA_00539	6.59e-48	-	-	-	-	-	-	-	-
NMKPALMA_00540	1.36e-66	czrA	-	-	K	ko:K22043	-	ko00000,ko03000	Transcriptional regulator, ArsR family
NMKPALMA_00541	0.0	-	3.2.1.17	CBM50	NU	ko:K01185,ko:K02395,ko:K19223	-	ko00000,ko01000,ko01002,ko01011,ko02035	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
NMKPALMA_00542	1.38e-223	scrR	-	-	K	ko:K02529,ko:K03484	-	ko00000,ko03000	Transcriptional regulator, LacI family
NMKPALMA_00543	2.6e-33	-	-	-	-	-	-	-	-
NMKPALMA_00544	1.03e-146	-	-	-	-	-	-	-	-
NMKPALMA_00545	2.7e-277	yttB	-	-	EGP	-	-	-	Major Facilitator
NMKPALMA_00546	1.38e-311	hisS	6.1.1.21	-	J	ko:K01892	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	histidyl-tRNA synthetase
NMKPALMA_00547	2.46e-113	-	-	-	-	-	-	-	-
NMKPALMA_00548	1.06e-142	nnrE	5.1.99.6	-	H	ko:K17759	-	ko00000,ko01000	Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S- specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX
NMKPALMA_00549	0.0	-	-	-	S	-	-	-	Putative peptidoglycan binding domain
NMKPALMA_00550	2.94e-161	-	-	-	M	-	-	-	ErfK YbiS YcfS YnhG
NMKPALMA_00552	6.47e-130	-	-	-	-	-	-	-	-
NMKPALMA_00553	1.62e-276	dacA	3.4.16.4	-	M	ko:K01286,ko:K07258	ko00550,ko01100,map00550,map01100	ko00000,ko00001,ko01000,ko01002,ko01011	Belongs to the peptidase S11 family
NMKPALMA_00554	1.96e-192	-	-	-	S	-	-	-	Alpha beta hydrolase
NMKPALMA_00555	2.72e-262	gldA	1.1.1.6	-	C	ko:K00005	ko00561,ko00640,ko01100,map00561,map00640,map01100	ko00000,ko00001,ko01000	dehydrogenase
NMKPALMA_00556	0.0	ltaS	2.7.8.20	-	M	ko:K19005	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
NMKPALMA_00557	7.2e-56	-	-	-	-	-	-	-	-
NMKPALMA_00558	9.5e-162	pgm3	-	-	G	-	-	-	phosphoglycerate mutase family
NMKPALMA_00559	0.0	-	-	-	S	-	-	-	C4-dicarboxylate anaerobic carrier
NMKPALMA_00560	1.95e-315	nhaC	-	-	C	ko:K03315	-	ko00000,ko02000	Na H antiporter NhaC
NMKPALMA_00561	6.8e-307	pbuX	-	-	F	ko:K03458,ko:K16169	-	ko00000,ko02000	xanthine permease
NMKPALMA_00562	0.0	pepD1	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
NMKPALMA_00563	6.47e-213	corA	-	-	P	ko:K03284	-	ko00000,ko02000	CorA-like Mg2+ transporter protein
NMKPALMA_00564	8.51e-214	rluA	5.4.99.23, 5.4.99.28, 5.4.99.29	-	J	ko:K06177,ko:K06180	-	ko00000,ko01000,ko03009,ko03016	Responsible for synthesis of pseudouridine from uracil
NMKPALMA_00565	7.63e-169	yceF	-	-	P	ko:K05794	-	ko00000	membrane
NMKPALMA_00566	7.56e-73	trxA	-	-	O	ko:K03671	ko04621,ko05418,map04621,map05418	ko00000,ko00001,ko03110	Belongs to the thioredoxin family
NMKPALMA_00567	7.25e-301	mepA	-	-	V	ko:K18908	-	ko00000,ko00002,ko01504,ko02000	MATE efflux family protein
NMKPALMA_00568	2.29e-74	czrA	-	-	K	ko:K22043	-	ko00000,ko03000	Transcriptional regulator, ArsR family
NMKPALMA_00569	8.54e-123	-	-	-	P	-	-	-	Cadmium resistance transporter
NMKPALMA_00570	5.63e-177	XK27_08845	-	-	S	ko:K05833	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
NMKPALMA_00571	1.18e-196	XK27_08840	-	-	U	ko:K05832	-	ko00000,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
NMKPALMA_00572	4.49e-233	ABC-SBP	-	-	S	ko:K01989	-	ko00000,ko00002,ko02000	ABC transporter
NMKPALMA_00573	2.29e-164	-	-	-	M	-	-	-	PFAM NLP P60 protein
NMKPALMA_00575	9.7e-132	-	-	-	S	-	-	-	Protein of unknown function (DUF3278)
NMKPALMA_00576	2.12e-40	-	-	-	K	ko:K07729	-	ko00000,ko03000	Helix-turn-helix domain
NMKPALMA_00577	1.31e-32	-	-	-	K	-	-	-	Helix-turn-helix domain
NMKPALMA_00578	3.39e-131	cadD	-	-	P	-	-	-	Cadmium resistance transporter
NMKPALMA_00579	1.51e-75	cadX	-	-	K	ko:K21903	-	ko00000,ko03000	Bacterial regulatory protein, arsR family
NMKPALMA_00580	2.52e-148	lexA	3.4.21.88	-	K	ko:K01356	-	ko00000,ko00002,ko01000,ko01002,ko03400	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
NMKPALMA_00581	2.7e-47	ynzC	-	-	S	-	-	-	UPF0291 protein
NMKPALMA_00582	1.6e-40	XK26_06720	-	-	S	ko:K09976	-	ko00000	Uncharacterised protein family (UPF0154)
NMKPALMA_00583	2.62e-152	plsC	2.3.1.51	-	I	ko:K00655	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Acyltransferase
NMKPALMA_00584	4.85e-181	yabB	2.1.1.223	-	L	ko:K07461,ko:K15460	-	ko00000,ko01000,ko03016	Methyltransferase small domain
NMKPALMA_00585	6.79e-65	yazA	-	-	L	ko:K07461	-	ko00000	GIY-YIG catalytic domain protein
NMKPALMA_00586	3.56e-234	ldhD	1.1.1.28	-	CH	ko:K03778	ko00620,ko01120,map00620,map01120	ko00000,ko00001,ko01000	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
NMKPALMA_00587	3.54e-184	rpsB	-	-	J	ko:K02967	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uS2 family
NMKPALMA_00588	3.14e-197	tsf	-	-	J	ko:K02357	-	ko00000,ko03012,ko03029	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
NMKPALMA_00589	2.21e-167	pyrH	2.7.4.22	-	F	ko:K09903	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphorylation of UMP to UDP
NMKPALMA_00590	1.42e-121	frr	-	-	J	ko:K02838	-	ko00000,ko03012	Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
NMKPALMA_00591	3.03e-181	uppS	2.5.1.31	-	H	ko:K00806	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
NMKPALMA_00592	1.18e-177	cdsA	2.7.7.41	-	I	ko:K00981	ko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070	ko00000,ko00001,ko00002,ko01000	Belongs to the CDS family
NMKPALMA_00593	9.45e-298	rseP	-	-	M	ko:K11749	ko02024,ko04112,map02024,map04112	ko00000,ko00001,ko01000,ko01002	zinc metalloprotease
NMKPALMA_00594	0.0	proS	6.1.1.15	-	J	ko:K01881	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
NMKPALMA_00595	0.0	polC	2.7.7.7	-	L	ko:K03763	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
NMKPALMA_00596	1.1e-108	rimP	-	-	J	ko:K09748	-	ko00000,ko03009	Required for maturation of 30S ribosomal subunits
NMKPALMA_00597	1.01e-275	nusA	-	-	K	ko:K02600	-	ko00000,ko03009,ko03021	Participates in both transcription termination and antitermination
NMKPALMA_00598	5.93e-60	ylxR	-	-	K	ko:K07742	-	ko00000	Protein of unknown function (DUF448)
NMKPALMA_00599	5.61e-65	ylxQ	-	-	J	-	-	-	ribosomal protein
NMKPALMA_00600	0.0	infB	-	-	J	ko:K02519	-	ko00000,ko03012,ko03029	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
NMKPALMA_00601	1.38e-77	rbfA	-	-	J	ko:K02834	-	ko00000,ko03009	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
NMKPALMA_00602	2.63e-210	truB	5.4.99.25	-	J	ko:K03177,ko:K03483	-	ko00000,ko01000,ko03000,ko03016	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
NMKPALMA_00603	4.45e-225	ribF	2.7.1.26, 2.7.7.2	-	H	ko:K11753	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Belongs to the ribF family
NMKPALMA_00604	3.09e-85	-	-	-	-	-	-	-	-
NMKPALMA_00605	4.58e-247	hrcA	-	-	K	ko:K03705	-	ko00000,ko03000	Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
NMKPALMA_00606	1.1e-115	grpE	-	-	O	ko:K03687	-	ko00000,ko03029,ko03110	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
NMKPALMA_00607	0.0	dnaK	-	-	O	ko:K04043	ko03018,ko04212,ko05152,map03018,map04212,map05152	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	Heat shock 70 kDa protein
NMKPALMA_00608	1.81e-272	dnaJ	-	-	O	ko:K03686	-	ko00000,ko03029,ko03110	ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
NMKPALMA_00609	0.0	lepA	-	-	M	ko:K03596	ko05134,map05134	ko00000,ko00001	Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
NMKPALMA_00610	9.17e-275	pepD3	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
NMKPALMA_00611	3.34e-62	pepD3	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
NMKPALMA_00612	1.44e-254	-	-	-	C	-	-	-	Belongs to the LDH2 MDH2 oxidoreductase family
NMKPALMA_00613	3.37e-222	ldh	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	Belongs to the LDH MDH superfamily. LDH family
NMKPALMA_00614	7.92e-76	-	-	-	-	-	-	-	-
NMKPALMA_00615	9.78e-231	prmA	-	-	J	ko:K02687	-	ko00000,ko01000,ko03009	Ribosomal protein L11 methyltransferase
NMKPALMA_00616	4.09e-166	rsmE	2.1.1.193	-	J	ko:K09761	-	ko00000,ko01000,ko03009	Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
NMKPALMA_00617	1.18e-72	-	-	-	-	-	-	-	-
NMKPALMA_00618	0.0	relA	2.7.6.5	-	KT	ko:K00951	ko00230,map00230	ko00000,ko00001,ko01000	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
NMKPALMA_00619	1.88e-101	dtd	-	-	J	ko:K07560	-	ko00000,ko01000,ko03016	rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
NMKPALMA_00620	8.25e-218	-	-	-	G	-	-	-	Phosphotransferase enzyme family
NMKPALMA_00621	0.0	aspS	6.1.1.12	-	J	ko:K01876	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
NMKPALMA_00622	4.45e-170	glnQ	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
NMKPALMA_00623	0.0	glnPH2	-	-	P	ko:K02029,ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter permease
NMKPALMA_00624	1e-31	rpsU	-	-	J	ko:K02970	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bS21 family
NMKPALMA_00625	3.33e-92	yqeY	-	-	S	ko:K09117	-	ko00000	YqeY-like protein
NMKPALMA_00626	1.07e-237	cbh	3.5.1.24	-	M	ko:K01442	ko00120,ko00121,ko01100,map00120,map00121,map01100	ko00000,ko00001,ko01000	Linear amide C-N hydrolase, choloylglycine hydrolase family protein
NMKPALMA_00627	6.94e-302	argG	6.3.4.5	-	E	ko:K01940	ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,ko05418,map00220,map00250,map01100,map01110,map01130,map01230,map05418	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the argininosuccinate synthase family. Type 1 subfamily
NMKPALMA_00628	0.0	argH	4.3.2.1	-	E	ko:K01755	ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,map00220,map00250,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	argininosuccinate lyase
NMKPALMA_00629	4.01e-118	bioY	-	-	S	ko:K03523	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	BioY family
NMKPALMA_00630	1.77e-128	birA	6.3.4.15	-	H	ko:K03524	ko00780,ko01100,map00780,map01100	ko00000,ko00001,ko01000,ko03000	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
NMKPALMA_00631	0.0	-	-	-	L	-	-	-	PFAM transposase, IS4 family protein
NMKPALMA_00632	0.0	yhcA	-	-	V	ko:K02003,ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
NMKPALMA_00633	4.1e-153	lolD	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
NMKPALMA_00634	4.82e-234	yxeA	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter permease
NMKPALMA_00635	2.34e-116	-	-	-	K	-	-	-	transcriptional regulator (TetR family)
NMKPALMA_00636	7.01e-244	-	-	-	E	-	-	-	Zinc-binding dehydrogenase
NMKPALMA_00637	0.0	mntH	-	-	P	ko:K03322	-	ko00000,ko02000	H( )-stimulated, divalent metal cation uptake system
NMKPALMA_00638	3.39e-71	-	-	-	-	-	-	-	-
NMKPALMA_00639	0.0	thrS	6.1.1.3	-	J	ko:K01868	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
NMKPALMA_00641	7.35e-290	yxiO	-	-	S	ko:K06902	ko04138,map04138	ko00000,ko00001,ko02000,ko04131	Vacuole effluxer Atg22 like
NMKPALMA_00642	0.0	npp	-	-	S	-	-	-	type I phosphodiesterase nucleotide pyrophosphatase
NMKPALMA_00643	9.08e-317	-	-	-	E	ko:K03294	-	ko00000	amino acid
NMKPALMA_00644	1.63e-233	panE	1.1.1.169	-	H	ko:K00077	ko00770,ko01100,ko01110,map00770,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
NMKPALMA_00646	3.88e-38	-	-	-	K	ko:K07729	-	ko00000,ko03000	Helix-turn-helix XRE-family like proteins
NMKPALMA_00648	2.27e-268	-	2.1.1.14	-	E	ko:K00549	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	methionine synthase, vitamin-B12 independent
NMKPALMA_00649	5.36e-97	-	-	-	-	-	-	-	-
NMKPALMA_00650	2.99e-289	dacA	3.4.16.4	-	M	ko:K07258	ko00550,ko01100,map00550,map01100	ko00000,ko00001,ko01000,ko01002,ko01011	Belongs to the peptidase S11 family
NMKPALMA_00651	5.58e-178	-	-	-	V	-	-	-	Beta-lactamase enzyme family
NMKPALMA_00652	0.0	gtfA	2.4.1.7	GH13	G	ko:K00690	ko00500,map00500	ko00000,ko00001,ko01000	Sucrose glucosyltransferase
NMKPALMA_00653	1.81e-274	-	-	-	EGP	-	-	-	Transporter, major facilitator family protein
NMKPALMA_00654	0.0	arcT	-	-	E	-	-	-	Dipeptidase
NMKPALMA_00655	0.0	arcD	-	-	S	-	-	-	C4-dicarboxylate anaerobic carrier
NMKPALMA_00656	4.29e-227	ywbN	-	-	P	ko:K07223,ko:K16301	-	ko00000,ko01000,ko02000	Peroxidase
NMKPALMA_00657	9.25e-213	yjcA	-	-	S	ko:K19350	ko02010,map02010	ko00000,ko00001,ko01504,ko02000	ABC transporter
NMKPALMA_00658	2.23e-175	-	-	-	I	-	-	-	alpha/beta hydrolase fold
NMKPALMA_00659	2.04e-230	-	-	-	S	-	-	-	Conserved hypothetical protein 698
NMKPALMA_00660	0.0	-	-	-	G	ko:K03832	-	ko00000,ko02000	Belongs to the glycosyl hydrolase family 6
NMKPALMA_00661	7.45e-124	-	-	-	S	-	-	-	NADPH-dependent FMN reductase
NMKPALMA_00662	1.53e-215	mccA	2.5.1.134, 2.5.1.47	-	E	ko:K01738,ko:K17216	ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the cysteine synthase cystathionine beta- synthase family
NMKPALMA_00663	4.65e-229	hemH	4.99.1.1, 4.99.1.9	-	H	ko:K01772	ko00860,ko01100,ko01110,map00860,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the ferrous insertion into protoporphyrin IX
NMKPALMA_00664	6.6e-294	mntH	-	-	P	ko:K03322	-	ko00000,ko02000	H( )-stimulated, divalent metal cation uptake system
NMKPALMA_00665	1.79e-112	-	-	-	Q	-	-	-	Methyltransferase
NMKPALMA_00666	2.8e-152	ktrA	-	-	P	ko:K03499	-	ko00000,ko02000	domain protein
NMKPALMA_00667	9.2e-303	ktrB	-	-	P	ko:K03498	-	ko00000,ko02000	Potassium uptake protein
NMKPALMA_00668	0.0	mycA	4.2.1.53	-	S	ko:K10254	-	ko00000,ko01000	Myosin-crossreactive antigen
NMKPALMA_00669	3.83e-179	nfrA	1.5.1.38	-	C	ko:K19285	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	nitroreductase
NMKPALMA_00670	5.69e-283	-	-	-	G	-	-	-	Glycosyl hydrolases family 8
NMKPALMA_00671	1.18e-308	-	-	-	M	-	-	-	Glycosyl transferase
NMKPALMA_00672	2.12e-193	-	-	-	-	-	-	-	-
NMKPALMA_00673	3.02e-162	phoU	-	-	P	ko:K02039	-	ko00000	Plays a role in the regulation of phosphate uptake
NMKPALMA_00674	3.14e-177	pstB	3.6.3.27	-	P	ko:K02036	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
NMKPALMA_00675	2.58e-197	pstA	-	-	P	ko:K02038	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Phosphate transport system permease protein PstA
NMKPALMA_00676	9.65e-196	pstC	-	-	P	ko:K02037	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	probably responsible for the translocation of the substrate across the membrane
NMKPALMA_00677	4.19e-206	pstS	-	-	P	ko:K02040	ko02010,ko02020,ko05152,map02010,map02020,map05152	ko00000,ko00001,ko00002,ko02000	Phosphate
NMKPALMA_00678	2.14e-172	-	-	-	K	ko:K07658	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	Transcriptional regulatory protein, C-terminal domain protein
NMKPALMA_00679	6.63e-174	-	-	-	P	ko:K02006	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
NMKPALMA_00680	2.86e-184	-	-	-	P	ko:K02008	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Cobalt transport protein
NMKPALMA_00681	1.35e-237	cbiM	-	-	P	ko:K02007	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	PDGLE domain
NMKPALMA_00682	4.23e-212	ureD	-	-	O	ko:K03190	-	ko00000	Required for maturation of urease via the functional incorporation of the urease nickel metallocenter
NMKPALMA_00683	1.4e-145	ureG	-	-	KO	ko:K03189	-	ko00000	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
NMKPALMA_00684	1.45e-170	ureF	-	-	O	ko:K03188	-	ko00000	Required for maturation of urease via the functional incorporation of the urease nickel metallocenter
NMKPALMA_00685	3.08e-102	ureE	-	-	O	ko:K03187	-	ko00000	Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly
NMKPALMA_00686	0.0	ureC	3.5.1.5	-	E	ko:K01428	ko00220,ko00230,ko00791,ko01100,ko01120,ko05120,map00220,map00230,map00791,map01100,map01120,map05120	ko00000,ko00001,ko01000	Amidohydrolase family
NMKPALMA_00687	6.94e-92	ureB	3.5.1.5	-	E	ko:K01429	ko00220,ko00230,ko00791,ko01100,ko01120,map00220,map00230,map00791,map01100,map01120	ko00000,ko00001,ko01000	Urease beta subunit
NMKPALMA_00688	3.71e-64	ureA	3.5.1.5	-	E	ko:K01430	ko00220,ko00230,ko00791,ko01100,ko01120,map00220,map00230,map00791,map01100,map01120	ko00000,ko00001,ko01000	Urease, gamma subunit
NMKPALMA_00689	1.03e-127	-	-	-	S	-	-	-	AmiS/UreI family transporter
NMKPALMA_00690	3.75e-286	amt	-	-	P	ko:K03320	-	ko00000,ko02000	ammonium transporter
NMKPALMA_00692	4.32e-234	-	-	-	-	-	-	-	-
NMKPALMA_00693	9.45e-126	-	-	-	K	-	-	-	acetyltransferase
NMKPALMA_00694	2.79e-274	-	-	-	L	ko:K07487	-	ko00000	Transposase
NMKPALMA_00695	8.87e-227	-	-	-	-	-	-	-	-
NMKPALMA_00696	4.8e-128	efp	-	-	J	ko:K02356	-	ko00000,ko03012	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
NMKPALMA_00697	2.85e-232	-	-	-	S	ko:K07035	-	ko00000	Phosphotransferase system, EIIC
NMKPALMA_00698	2.49e-295	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
NMKPALMA_00699	3.52e-253	galM	5.1.3.3	-	G	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the interconversion of alpha and beta anomers of maltose
NMKPALMA_00700	6.92e-31	-	-	-	-	-	-	-	-
NMKPALMA_00703	0.0	-	-	-	S	ko:K13730	ko05100,map05100	ko00000,ko00001	Uncharacterized protein conserved in bacteria (DUF2252)
NMKPALMA_00704	1.5e-213	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
NMKPALMA_00705	0.0	-	-	-	L	-	-	-	PFAM plasmid pRiA4b ORF-3 family protein
NMKPALMA_00706	7.79e-263	adh	1.1.1.1	-	C	ko:K13953	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	Zinc-binding alcohol dehydrogenase family protein
NMKPALMA_00707	1.17e-143	ppiB	5.2.1.8	-	G	ko:K03768	-	ko00000,ko01000,ko03110	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
NMKPALMA_00708	1.63e-200	mleR	-	-	K	-	-	-	LysR family
NMKPALMA_00709	0.0	mleS	1.1.1.38, 4.1.1.101	-	C	ko:K00027,ko:K22212	ko00620,ko01120,ko01200,ko02020,map00620,map01120,map01200,map02020	ko00000,ko00001,ko01000	Malic enzyme
NMKPALMA_00710	0.0	fumC	4.2.1.2	-	C	ko:K01679	ko00020,ko00620,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko04934,ko05200,ko05211,map00020,map00620,map00720,map01100,map01110,map01120,map01130,map01200,map04934,map05200,map05211	ko00000,ko00001,ko00002,ko01000	Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
NMKPALMA_00711	0.0	frdA	1.3.5.4	-	C	ko:K00244	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	ko00000,ko00001,ko00002,ko01000	FAD binding domain
NMKPALMA_00712	6.01e-166	ldh	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	Belongs to the LDH MDH superfamily. LDH family
NMKPALMA_00713	6.12e-216	citP	-	-	P	ko:K03319	-	ko00000	Sodium:sulfate symporter transmembrane region
NMKPALMA_00714	1.24e-157	citR	-	-	K	-	-	-	sugar-binding domain protein
NMKPALMA_00715	3.84e-222	mae	1.1.1.38	-	C	ko:K00027	ko00620,ko01200,ko02020,map00620,map01200,map02020	ko00000,ko00001,ko01000	Malic enzyme, NAD binding domain
NMKPALMA_00716	8.06e-189	citC	6.2.1.22	-	H	ko:K01910	ko02020,map02020	ko00000,ko00001,ko01000	Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
NMKPALMA_00717	4.25e-55	citD	-	-	C	ko:K01646	ko02020,map02020	ko00000,ko00001	Covalent carrier of the coenzyme of citrate lyase
NMKPALMA_00718	1.56e-202	citE	4.1.3.34	-	G	ko:K01644	ko02020,map02020	ko00000,ko00001,ko01000	Belongs to the HpcH HpaI aldolase family
NMKPALMA_00719	0.0	citF	2.8.3.10	-	H	ko:K01643	ko02020,map02020	ko00000,ko00001,ko01000	Citrate (pro-3S)-lyase alpha chain
NMKPALMA_00720	5.47e-194	citG	2.4.2.52	-	H	ko:K05966	ko02020,map02020	ko00000,ko00001,ko01000	2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase
NMKPALMA_00721	3.59e-143	-	-	-	I	-	-	-	Alpha/beta hydrolase family
NMKPALMA_00722	5.93e-204	-	-	-	K	-	-	-	LysR family
NMKPALMA_00723	0.0	-	-	-	S	-	-	-	Putative threonine/serine exporter
NMKPALMA_00724	6.38e-151	-	3.2.2.27	-	L	ko:K21929	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Uracil-DNA glycosylase
NMKPALMA_00725	0.0	qacA	-	-	EGP	-	-	-	Major Facilitator
NMKPALMA_00726	2.52e-237	-	-	-	I	-	-	-	Alpha beta
NMKPALMA_00727	1.3e-120	-	3.5.1.124	-	S	ko:K03152	-	ko00000,ko01000,ko01002	DJ-1/PfpI family
NMKPALMA_00728	0.0	mprF	2.3.2.3	-	S	ko:K14205	ko01503,ko02020,ko05150,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01000,ko01504	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
NMKPALMA_00730	2.15e-203	yjbO	5.4.99.23	-	J	ko:K06180	-	ko00000,ko01000,ko03009	Responsible for synthesis of pseudouridine from uracil
NMKPALMA_00731	5.25e-151	-	-	-	S	-	-	-	Domain of unknown function (DUF4811)
NMKPALMA_00732	0.0	ycnB	-	-	U	-	-	-	Belongs to the major facilitator superfamily
NMKPALMA_00733	8.85e-97	-	-	-	K	-	-	-	MerR HTH family regulatory protein
NMKPALMA_00734	9.15e-72	-	-	-	-	-	-	-	-
NMKPALMA_00735	0.0	rnjA	-	-	J	ko:K12574	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
NMKPALMA_00736	9.07e-279	-	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
NMKPALMA_00737	8.58e-140	glnP	-	-	P	ko:K10040	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
NMKPALMA_00738	7.44e-143	glnM	-	-	P	ko:K10040	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
NMKPALMA_00739	1.34e-195	peb1A	-	-	ET	ko:K10039	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
NMKPALMA_00740	1.14e-172	glnQ	-	-	E	ko:K10041	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
NMKPALMA_00741	2.79e-107	-	-	-	T	-	-	-	Belongs to the universal stress protein A family
NMKPALMA_00742	5.5e-141	-	-	-	S	-	-	-	VIT family
NMKPALMA_00743	1.27e-152	-	-	-	S	-	-	-	membrane
NMKPALMA_00744	4.92e-213	-	-	-	P	ko:K16264	-	ko00000,ko02000	cation diffusion facilitator family transporter
NMKPALMA_00745	1.1e-159	mntR	-	-	K	ko:K03709	-	ko00000,ko03000	iron dependent repressor
NMKPALMA_00746	5.12e-42	cspC	-	-	K	ko:K03704	-	ko00000,ko03000	Cold shock protein
NMKPALMA_00747	3.62e-167	-	-	-	S	-	-	-	Putative threonine/serine exporter
NMKPALMA_00748	1.06e-106	-	-	-	S	-	-	-	Threonine/Serine exporter, ThrE
NMKPALMA_00749	2.68e-151	-	-	-	I	-	-	-	phosphatase
NMKPALMA_00750	3.26e-07	-	2.3.1.128	-	J	ko:K03790	-	ko00000,ko01000,ko03009	Acetyltransferase (GNAT) domain
NMKPALMA_00751	0.0	lysP	-	-	E	ko:K03293,ko:K11733	-	ko00000,ko02000	amino acid
NMKPALMA_00752	3.7e-148	dgk2	-	-	F	-	-	-	deoxynucleoside kinase
NMKPALMA_00758	4.19e-47	-	-	-	I	-	-	-	transferase activity, transferring acyl groups other than amino-acyl groups
NMKPALMA_00759	4.59e-75	-	-	-	I	-	-	-	transferase activity, transferring acyl groups other than amino-acyl groups
NMKPALMA_00760	1.62e-229	-	-	-	S	ko:K06889	-	ko00000	Hydrolases of the alpha beta superfamily
NMKPALMA_00761	1.8e-249	adhP	1.1.1.1	-	C	ko:K00001,ko:K13953	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	alcohol dehydrogenase
NMKPALMA_00762	2.81e-101	ctsR	-	-	K	ko:K03708	-	ko00000,ko03000	Belongs to the CtsR family
NMKPALMA_00763	0.0	clpC	-	-	O	ko:K03696	ko01100,map01100	ko00000,ko03110	Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
NMKPALMA_00764	2.09e-143	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
NMKPALMA_00765	0.0	rpoB	2.7.7.6	-	K	ko:K03043	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
NMKPALMA_00766	0.0	rpoC	2.7.7.6	-	K	ko:K03046	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
NMKPALMA_00767	2.23e-261	-	-	-	-	-	-	-	-
NMKPALMA_00768	6.31e-150	comC	3.4.23.43	-	NOU	ko:K02236	-	ko00000,ko00002,ko01000,ko02044	Bacterial Peptidase A24 N-terminal domain
NMKPALMA_00769	2.51e-94	rpsL	-	-	J	ko:K02950	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
NMKPALMA_00770	2.4e-107	rpsG	-	-	J	ko:K02992	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
NMKPALMA_00771	0.0	fusA	-	-	J	ko:K02355	-	ko00000,ko03012,ko03029	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
NMKPALMA_00772	1.28e-65	rpsJ	-	-	J	ko:K02946	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Involved in the binding of tRNA to the ribosomes
NMKPALMA_00773	5.45e-153	rplC	-	-	J	ko:K02906	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
NMKPALMA_00774	6.64e-139	rplD	-	-	J	ko:K02926	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the polypeptide exit tunnel
NMKPALMA_00775	1.04e-60	rplW	-	-	J	ko:K02892	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
NMKPALMA_00776	1.16e-203	rplB	-	-	J	ko:K02886	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
NMKPALMA_00777	5.72e-62	rpsS	-	-	J	ko:K02965	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
NMKPALMA_00778	4.36e-70	rplV	-	-	J	ko:K02890	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
NMKPALMA_00779	9.81e-157	rpsC	-	-	J	ko:K02982	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
NMKPALMA_00780	1.96e-98	rplP	-	-	J	ko:K02878	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
NMKPALMA_00781	5.49e-38	rpmC	-	-	J	ko:K02904	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uL29 family
NMKPALMA_00782	1.1e-55	rpsQ	-	-	J	ko:K02961	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
NMKPALMA_00783	3.62e-79	rplN	-	-	J	ko:K02874	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
NMKPALMA_00784	2.58e-65	rplX	-	-	J	ko:K02895	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
NMKPALMA_00785	7.42e-125	rplE	-	-	J	ko:K02931	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
NMKPALMA_00786	4.97e-40	rpsN	-	-	J	ko:K02954	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
NMKPALMA_00787	1.54e-87	rpsH	-	-	J	ko:K02994	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
NMKPALMA_00788	8.7e-123	rplF	-	-	J	ko:K02933	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
NMKPALMA_00789	5.03e-75	rplR	-	-	J	ko:K02881	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
NMKPALMA_00790	5.95e-112	rpsE	-	-	J	ko:K02988	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
NMKPALMA_00791	5.94e-34	rpmD	-	-	J	ko:K02907	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L30
NMKPALMA_00792	6.05e-93	rplO	-	-	J	ko:K02876	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to the 23S rRNA
NMKPALMA_00793	2.88e-306	secY	-	-	U	ko:K03076	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
NMKPALMA_00794	4.52e-161	adk	2.7.4.3	-	F	ko:K00939	ko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
NMKPALMA_00795	2.41e-45	infA	-	-	J	ko:K02518	-	ko00000,ko03012	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
NMKPALMA_00796	5.79e-21	rpmJ	-	-	J	ko:K02919	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL36 family
NMKPALMA_00797	1.54e-75	rpsM	-	-	J	ko:K02952	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
NMKPALMA_00798	5.42e-82	rpsK	-	-	J	ko:K02948	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
NMKPALMA_00799	2.19e-220	rpoA	2.7.7.6	-	K	ko:K03040	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
NMKPALMA_00800	8.08e-83	rplQ	-	-	J	ko:K02879	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L17
NMKPALMA_00801	2.21e-189	ecfA1	-	-	P	ko:K16786	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
NMKPALMA_00802	8.7e-198	ecfA2	-	-	P	ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
NMKPALMA_00803	2.03e-181	ecfT	-	-	U	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
NMKPALMA_00804	4.31e-182	truA	5.4.99.12	-	J	ko:K06173	-	ko00000,ko01000,ko03016	Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
NMKPALMA_00805	9.25e-103	rplM	-	-	J	ko:K02871	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
NMKPALMA_00806	3.94e-85	rpsI	-	-	J	ko:K02996	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uS9 family
NMKPALMA_00807	2.58e-179	budC	1.1.1.304, 1.1.1.76	-	IQ	ko:K03366	ko00650,map00650	ko00000,ko00001,ko01000	reductase
NMKPALMA_00808	5.95e-147	acmA	3.2.1.17, 3.2.1.96	-	NU	ko:K01185,ko:K01227	ko00511,map00511	ko00000,ko00001,ko01000	mannosyl-glycoprotein
NMKPALMA_00809	2.75e-130	xpt	2.4.2.22	-	F	ko:K03816	ko00230,ko01100,ko01110,map00230,map01100,map01110	ko00000,ko00001,ko01000	Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
NMKPALMA_00810	3.24e-272	purK2	6.3.4.18	-	F	ko:K01589	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
NMKPALMA_00811	0.0	pcrA	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	ATP-dependent DNA helicase
NMKPALMA_00812	0.0	ligA	6.5.1.2	-	L	ko:K01972	ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430	ko00000,ko00001,ko01000,ko03032,ko03400	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
NMKPALMA_00813	1.11e-260	camS	-	-	S	-	-	-	sex pheromone
NMKPALMA_00814	6.49e-65	gatC	6.3.5.6, 6.3.5.7	-	J	ko:K02435	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
NMKPALMA_00815	0.0	gatA	6.3.5.6, 6.3.5.7	-	J	ko:K02433	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
NMKPALMA_00816	0.0	gatB	6.3.5.6, 6.3.5.7	-	J	ko:K02434	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
NMKPALMA_00817	4.7e-238	dagK	2.7.1.107	-	G	ko:K07029	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko01000	Lipid kinase
NMKPALMA_00819	0.0	rumA_2	2.1.1.190	-	J	ko:K03215	-	ko00000,ko01000,ko03009	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
NMKPALMA_00822	4.87e-285	mod	2.1.1.72	-	L	ko:K00571,ko:K07316	-	ko00000,ko01000,ko02048	DNA methylase
NMKPALMA_00823	0.0	res	3.1.21.5	-	L	ko:K01156	-	ko00000,ko01000,ko02048	Type III restriction enzyme, res subunit
NMKPALMA_00824	1.16e-285	-	-	-	K	-	-	-	DNA binding
NMKPALMA_00825	0.0	-	-	-	L	-	-	-	helicase activity
NMKPALMA_00827	4.88e-71	arsC	1.20.4.1	-	T	ko:K03741	-	ko00000,ko01000	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
NMKPALMA_00828	4.46e-29	-	-	-	-	-	-	-	-
NMKPALMA_00829	1.96e-61	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
NMKPALMA_00830	1.02e-92	-	-	-	S	-	-	-	NADPH-dependent FMN reductase
NMKPALMA_00831	1.97e-213	-	-	-	L	-	-	-	Plasmid pRiA4b ORF-3-like protein
NMKPALMA_00832	1.23e-76	-	-	-	H	-	-	-	Riboflavin biosynthesis protein RibD
NMKPALMA_00833	1.62e-78	-	-	-	S	-	-	-	Protein of unknown function (DUF3021)
NMKPALMA_00834	5.1e-97	-	-	-	K	-	-	-	LytTr DNA-binding domain
NMKPALMA_00835	4.78e-188	cylB	-	-	V	ko:K11051	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC-2 type transporter
NMKPALMA_00836	1.02e-198	-	-	-	V	ko:K11050	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
NMKPALMA_00837	1.6e-69	-	-	-	-	-	-	-	-
NMKPALMA_00838	0.0	XK27_08510	-	-	L	-	-	-	Type III restriction protein res subunit
NMKPALMA_00839	5.76e-134	-	-	-	S	-	-	-	PFAM Archaeal ATPase
NMKPALMA_00840	6.08e-92	-	-	-	S	-	-	-	PFAM Archaeal ATPase
NMKPALMA_00841	1.03e-112	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
NMKPALMA_00842	1.54e-269	amt	-	-	P	ko:K03320	-	ko00000,ko02000	ammonium transporter
NMKPALMA_00843	2.05e-312	-	1.8.1.7	-	C	ko:K00383	ko00480,ko04918,map00480,map04918	ko00000,ko00001,ko01000	pyridine nucleotide-disulfide oxidoreductase
NMKPALMA_00844	8.95e-105	yvbK	-	-	K	-	-	-	GNAT family
NMKPALMA_00845	2.12e-119	-	-	-	-	-	-	-	-
NMKPALMA_00846	3.18e-160	pnb	-	-	C	-	-	-	nitroreductase
NMKPALMA_00847	5.29e-109	adaB	2.1.1.63	-	L	ko:K00567,ko:K10778,ko:K13531	-	ko00000,ko01000,ko03000,ko03400	Methyltransferase
NMKPALMA_00848	7.88e-215	-	3.2.1.96, 3.5.1.28	GH73	M	ko:K01227,ko:K01447,ko:K13714,ko:K13731	ko00511,ko05100,map00511,map05100	ko00000,ko00001,ko01000	N-acetylmuramoyl-L-alanine amidase
NMKPALMA_00849	1.47e-95	-	-	-	S	-	-	-	Protein of unknown function (DUF3021)
NMKPALMA_00850	2.78e-98	-	-	-	K	-	-	-	LytTr DNA-binding domain
NMKPALMA_00851	2.6e-27	-	-	-	-	-	-	-	-
NMKPALMA_00852	1.68e-256	-	-	-	P	-	-	-	Major Facilitator Superfamily
NMKPALMA_00853	2.26e-153	ybhL	-	-	S	ko:K06890	-	ko00000	Belongs to the BI1 family
NMKPALMA_00854	7.53e-104	yjcF	3.5.4.33, 4.4.1.8	-	K	ko:K02348,ko:K07000,ko:K11991,ko:K14155	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko01000,ko01007,ko03016	protein acetylation
NMKPALMA_00855	3.08e-245	-	-	-	S	-	-	-	Protein of unknown function (DUF3114)
NMKPALMA_00856	0.0	gshA	6.3.2.2	-	H	ko:K01919	ko00270,ko00480,ko01100,map00270,map00480,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the glutamate--cysteine ligase type 1 family
NMKPALMA_00857	1.07e-212	-	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	Belongs to the LDH MDH superfamily
NMKPALMA_00858	2.25e-139	-	3.2.2.10	-	S	ko:K06966	ko00230,ko00240,map00230,map00240	ko00000,ko00001,ko01000	Belongs to the LOG family
NMKPALMA_00859	1.32e-80	-	-	-	S	-	-	-	Domain of unknown function (DUF4828)
NMKPALMA_00860	7.59e-245	mocA	-	-	S	-	-	-	Oxidoreductase
NMKPALMA_00861	3.16e-296	yfmL	-	-	L	-	-	-	DEAD DEAH box helicase
NMKPALMA_00863	2e-264	mnaA	5.1.3.14	-	G	ko:K01791	ko00520,ko01100,ko05111,map00520,map01100,map05111	ko00000,ko00001,ko00002,ko01000,ko01005	Belongs to the UDP-N-acetylglucosamine 2-epimerase family
NMKPALMA_00864	1.41e-79	-	-	-	L	ko:K07491	-	ko00000	PFAM transposase IS200-family protein
NMKPALMA_00865	1.43e-41	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
NMKPALMA_00866	3.21e-56	-	-	-	L	-	-	-	PFAM RNA-directed DNA polymerase (Reverse transcriptase)
NMKPALMA_00869	1.99e-146	-	-	-	K	-	-	-	Transcriptional regulator
NMKPALMA_00870	2.68e-67	rplU	-	-	J	ko:K02888	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein binds to 23S rRNA in the presence of protein L20
NMKPALMA_00871	2.94e-71	ysxB	-	-	J	ko:K07584	-	ko00000	Cysteine protease Prp
NMKPALMA_00872	4.17e-60	rpmA	-	-	J	ko:K02899	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL27 family
NMKPALMA_00873	2.22e-169	-	-	-	S	ko:K06997	-	ko00000	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
NMKPALMA_00874	1.83e-257	pepP	3.4.11.9, 3.4.13.9	-	E	ko:K01262,ko:K01271	-	ko00000,ko01000,ko01002	Creatinase/Prolidase N-terminal domain
NMKPALMA_00875	8.59e-148	-	-	-	J	-	-	-	2'-5' RNA ligase superfamily
NMKPALMA_00876	1.87e-92	WQ51_04310	-	-	S	ko:K10947	-	ko00000,ko03000	Asp23 family, cell envelope-related function
NMKPALMA_00877	2.24e-92	nusB	-	-	K	ko:K03625	-	ko00000,ko03009,ko03021	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
NMKPALMA_00878	3.25e-192	folD	1.5.1.5, 3.5.4.9	-	F	ko:K01491	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
NMKPALMA_00879	3.77e-278	xseA	3.1.11.6	-	L	ko:K03601	ko03430,map03430	ko00000,ko00001,ko01000,ko03400	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
NMKPALMA_00880	2.33e-57	xseB	3.1.11.6	-	L	ko:K03602	ko03430,map03430	ko00000,ko00001,ko01000,ko03400	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
NMKPALMA_00881	7.46e-200	ispA	2.5.1.1, 2.5.1.10, 2.5.1.29	-	H	ko:K13789	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko01006	Belongs to the FPP GGPP synthase family
NMKPALMA_00882	6.89e-192	rrmJ	2.1.1.226, 2.1.1.227	-	J	ko:K06442	-	ko00000,ko01000,ko03009	Ribosomal RNA large subunit methyltransferase J
NMKPALMA_00883	2.63e-99	argR2	-	-	K	ko:K03402	-	ko00000,ko03000	Regulates arginine biosynthesis genes
NMKPALMA_00884	0.0	recN	-	-	L	ko:K03631	-	ko00000,ko03400	May be involved in recombinational repair of damaged DNA
NMKPALMA_00885	8.66e-70	-	-	-	-	-	-	-	-
NMKPALMA_00886	4.37e-148	gmk	2.7.4.8	-	F	ko:K00942	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko00002,ko01000	Essential for recycling GMP and indirectly, cGMP
NMKPALMA_00887	6.66e-43	rpoZ	2.7.7.6	-	K	ko:K03060	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
NMKPALMA_00888	5.18e-272	coaBC	4.1.1.36, 6.3.2.5	-	H	ko:K01598,ko:K13038	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
NMKPALMA_00889	0.0	priA	-	-	L	ko:K04066	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
NMKPALMA_00890	8.26e-222	fmt	2.1.2.9	-	J	ko:K00604	ko00670,ko00970,map00670,map00970	ko00000,ko00001,ko01000	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
NMKPALMA_00891	1.98e-314	sun	2.1.1.176	-	J	ko:K03500	-	ko00000,ko01000,ko03009	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
NMKPALMA_00892	1.22e-167	stp	3.1.3.16	-	T	ko:K20074	-	ko00000,ko01000,ko01009	phosphatase
NMKPALMA_00893	0.0	prkC	2.7.11.1	-	KLT	ko:K08884,ko:K12132	-	ko00000,ko01000,ko01001	serine threonine protein kinase
NMKPALMA_00894	1.15e-206	rsgA	3.1.3.100	-	S	ko:K06949	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000,ko03009	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
NMKPALMA_00895	4.49e-151	rpe	5.1.3.1	-	G	ko:K01783	ko00030,ko00040,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the ribulose-phosphate 3-epimerase family
NMKPALMA_00896	2.72e-156	thiN	2.7.6.2	-	H	ko:K00949	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000	thiamine pyrophosphokinase
NMKPALMA_00897	1.1e-34	rpmB	-	-	J	ko:K02902	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL28 family
NMKPALMA_00898	1.05e-77	yloU	-	-	S	-	-	-	Asp23 family, cell envelope-related function
NMKPALMA_00899	0.0	yloV	-	-	S	ko:K07030	-	ko00000	DAK2 domain fusion protein YloV
NMKPALMA_00900	0.0	recG	3.6.4.12	-	L	ko:K03655	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
NMKPALMA_00901	1.11e-239	plsX	2.3.1.15	-	I	ko:K03621	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
NMKPALMA_00902	1.81e-50	acpP	-	-	IQ	ko:K02078	-	ko00000,ko00001	Carrier of the growing fatty acid chain in fatty acid biosynthesis
NMKPALMA_00903	1.57e-168	rnc	3.1.26.3	-	J	ko:K03685	ko03008,ko05205,map03008,map05205	ko00000,ko00001,ko01000,ko03009,ko03019,ko03036	Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
NMKPALMA_00904	0.0	smc	-	-	D	ko:K03529	-	ko00000,ko03036	Required for chromosome condensation and partitioning
NMKPALMA_00905	7.44e-261	ftsY	-	-	U	ko:K03110	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
NMKPALMA_00906	4.23e-76	ylxM	-	-	S	ko:K09787	-	ko00000	Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
NMKPALMA_00907	0.0	ffh	3.6.5.4	-	U	ko:K03106	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko01000,ko02044	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
NMKPALMA_00908	1.21e-58	rpsP	-	-	J	ko:K02959	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Belongs to the bacterial ribosomal protein bS16 family
NMKPALMA_00909	3.74e-53	ylqC	-	-	S	ko:K06960	-	ko00000	Belongs to the UPF0109 family
NMKPALMA_00910	5.33e-119	rimM	-	-	J	ko:K02860	-	ko00000,ko03009	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
NMKPALMA_00911	3.16e-182	trmD	2.1.1.228	-	J	ko:K00554	-	ko00000,ko01000,ko03016	Belongs to the RNA methyltransferase TrmD family
NMKPALMA_00912	0.0	-	-	-	E	ko:K03294	-	ko00000	amino acid
NMKPALMA_00913	7.16e-82	rplS	-	-	J	ko:K02884	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
NMKPALMA_00914	2.26e-267	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
NMKPALMA_00915	2.26e-65	-	-	-	-	-	-	-	-
NMKPALMA_00916	4.38e-23	-	-	-	-	-	-	-	-
NMKPALMA_00917	3.69e-56	-	-	-	E	-	-	-	Zn peptidase
NMKPALMA_00918	1.62e-67	-	-	-	K	-	-	-	Cro/C1-type HTH DNA-binding domain
NMKPALMA_00919	1.17e-34	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
NMKPALMA_00920	3.14e-110	-	-	-	K	ko:K07741	-	ko00000	BRO family, N-terminal domain
NMKPALMA_00921	4.52e-26	-	-	-	-	-	-	-	-
NMKPALMA_00923	7.11e-06	-	-	-	K	-	-	-	XRE family transcriptional regulator
NMKPALMA_00928	1.98e-53	-	-	-	S	-	-	-	ERF superfamily
NMKPALMA_00929	1.01e-117	-	-	-	S	-	-	-	Putative HNHc nuclease
NMKPALMA_00930	9.83e-57	ssb	-	-	L	ko:K03111	ko03030,ko03430,ko03440,map03030,map03430,map03440	ko00000,ko00001,ko03029,ko03032,ko03400	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
NMKPALMA_00931	1.7e-76	-	-	-	S	-	-	-	calcium ion binding
NMKPALMA_00932	5.09e-64	-	-	-	L	ko:K02315	-	ko00000,ko03032	IstB-like ATP binding protein
NMKPALMA_00940	1.61e-36	-	-	-	S	-	-	-	HNH endonuclease
NMKPALMA_00943	3e-31	-	-	-	-	-	-	-	-
NMKPALMA_00944	5.23e-28	-	-	-	S	-	-	-	Mazg nucleotide pyrophosphohydrolase
NMKPALMA_00946	5.21e-30	rusA	-	-	L	-	-	-	Endodeoxyribonuclease RusA
NMKPALMA_00952	7.36e-10	-	-	-	-	-	-	-	-
NMKPALMA_00953	2.16e-102	xtmA	-	-	L	ko:K07474	-	ko00000	Terminase small subunit
NMKPALMA_00954	6.04e-238	-	-	-	S	-	-	-	Terminase-like family
NMKPALMA_00955	9.06e-228	-	-	-	S	-	-	-	Phage portal protein, SPP1 Gp6-like
NMKPALMA_00956	2.23e-109	-	-	-	-	-	-	-	-
NMKPALMA_00958	1.81e-48	-	-	-	S	-	-	-	Domain of unknown function (DUF4355)
NMKPALMA_00959	1.5e-152	-	-	-	-	-	-	-	-
NMKPALMA_00960	2e-26	-	-	-	-	-	-	-	-
NMKPALMA_00961	1.3e-39	-	-	-	-	-	-	-	-
NMKPALMA_00962	7.79e-64	-	-	-	-	-	-	-	-
NMKPALMA_00965	1.57e-128	-	-	-	S	-	-	-	Protein of unknown function (DUF3383)
NMKPALMA_00966	2.39e-48	-	-	-	-	-	-	-	-
NMKPALMA_00970	1.06e-67	-	-	-	M	-	-	-	LysM domain
NMKPALMA_00971	7.34e-46	-	-	-	-	-	-	-	-
NMKPALMA_00972	1.83e-115	-	-	-	-	-	-	-	-
NMKPALMA_00973	1.82e-36	-	-	-	-	-	-	-	-
NMKPALMA_00975	6.31e-148	-	-	-	S	-	-	-	Baseplate J-like protein
NMKPALMA_00976	2.44e-29	-	-	-	-	-	-	-	-
NMKPALMA_00978	0.0	-	-	-	L	-	-	-	PFAM transposase, IS4 family protein
NMKPALMA_00979	0.0	-	-	-	L	-	-	-	PFAM transposase, IS4 family protein
NMKPALMA_00980	3.15e-193	-	-	-	D	-	-	-	transport
NMKPALMA_00981	0.0	lacZ	3.2.1.23	-	G	ko:K12308	ko00052,map00052	ko00000,ko00001,ko01000	-beta-galactosidase
NMKPALMA_00982	0.0	lacS	-	-	G	ko:K11104,ko:K16209	-	ko00000,ko02000	Transporter
NMKPALMA_00983	1.57e-237	lacR	-	-	K	ko:K02529	-	ko00000,ko03000	Transcriptional regulator
NMKPALMA_00984	5.42e-110	-	-	-	-	-	-	-	-
NMKPALMA_00988	9.18e-82	-	-	-	LU	-	-	-	DNA recombination-mediator protein A
NMKPALMA_00989	7.85e-22	-	-	-	L	-	-	-	Transposase
NMKPALMA_00991	3.27e-42	-	-	-	-	-	-	-	-
NMKPALMA_00993	2.17e-205	xth	3.1.11.2	-	L	ko:K01142	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	exodeoxyribonuclease III
NMKPALMA_00994	9e-72	-	-	-	S	-	-	-	Mazg nucleotide pyrophosphohydrolase
NMKPALMA_00995	2.58e-46	-	-	-	-	-	-	-	-
NMKPALMA_00996	0.0	-	-	-	L	-	-	-	PFAM transposase, IS4 family protein
NMKPALMA_00997	0.0	-	-	-	L	-	-	-	PFAM transposase, IS4 family protein
NMKPALMA_00998	3.39e-49	-	-	-	D	-	-	-	nuclear chromosome segregation
NMKPALMA_00999	1.34e-07	-	-	-	K	-	-	-	Helix-turn-helix domain
NMKPALMA_01002	2.82e-208	-	-	-	K	-	-	-	Protein of unknown function (DUF4065)
NMKPALMA_01003	4.27e-59	-	-	-	S	-	-	-	Motility quorum-sensing regulator, toxin of MqsA
NMKPALMA_01004	0.0	lysS	6.1.1.6	-	J	ko:K04567	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-II aminoacyl-tRNA synthetase family
NMKPALMA_01005	2.64e-242	dus	-	-	J	ko:K05540	-	ko00000,ko01000,ko03016	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
NMKPALMA_01006	2.27e-218	hslO	-	-	O	ko:K04083	-	ko00000,ko03110	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
NMKPALMA_01007	0.0	ftsH	-	-	O	ko:K03798	-	ko00000,ko00002,ko01000,ko01002,ko03110	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
NMKPALMA_01008	3.68e-125	hpt	2.4.2.8	-	F	ko:K00760	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the purine pyrimidine phosphoribosyltransferase family
NMKPALMA_01009	0.0	tilS	2.4.2.8, 6.3.4.19	-	J	ko:K04075,ko:K15780	ko00230,ko01100,ko01110,map00230,map01100,map01110	ko00000,ko00001,ko01000,ko03016	Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
NMKPALMA_01010	5.75e-103	yabR	-	-	J	ko:K07571	-	ko00000	RNA binding
NMKPALMA_01011	8.69e-76	divIC	-	-	D	ko:K13052	-	ko00000,ko03036	Septum formation initiator
NMKPALMA_01012	1.43e-52	yabO	-	-	J	-	-	-	S4 domain protein
NMKPALMA_01013	0.0	mfd	-	-	L	ko:K03723	ko03420,map03420	ko00000,ko00001,ko01000,ko03400	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
NMKPALMA_01014	5.62e-132	pth	3.1.1.29	-	J	ko:K01056	-	ko00000,ko01000,ko03012	The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
NMKPALMA_01015	8.08e-147	-	-	-	S	-	-	-	(CBS) domain
NMKPALMA_01016	3.27e-185	mhpD	-	-	Q	ko:K02509	ko00350,ko01120,map00350,map01120	ko00000,ko00001,ko01000	hydratase
NMKPALMA_01017	2.26e-308	codA	3.5.4.1	-	F	ko:K01485	ko00240,ko00330,ko01100,map00240,map00330,map01100	ko00000,ko00001,ko01000	cytosine deaminase
NMKPALMA_01018	0.0	-	-	-	U	-	-	-	Belongs to the purine-cytosine permease (2.A.39) family
NMKPALMA_01019	1.3e-82	ndoA	-	-	L	ko:K07171	-	ko00000,ko01000,ko02048	Toxic component of a toxin-antitoxin (TA) module
NMKPALMA_01020	3.22e-267	alr	5.1.1.1, 5.1.1.5	-	E	ko:K01775,ko:K20707	ko00473,ko01100,ko01502,map00473,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
NMKPALMA_01021	1.88e-80	acpS	2.7.8.7	-	I	ko:K00997	ko00770,map00770	ko00000,ko00001,ko01000	Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
NMKPALMA_01022	2.63e-08	dltX	-	-	S	-	-	-	D-Ala-teichoic acid biosynthesis protein
NMKPALMA_01023	0.0	dltA	6.1.1.13	-	H	ko:K03367	ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01000,ko01504	Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
NMKPALMA_01024	2.23e-300	dltB	-	-	M	ko:K03739	ko01503,ko02020,ko05150,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01504	MBOAT, membrane-bound O-acyltransferase family
NMKPALMA_01025	1e-47	dltC	6.1.1.13	-	J	ko:K14188	ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01000,ko01504	Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
NMKPALMA_01026	0.0	dltD	-	-	M	ko:K03740	ko01503,ko02020,ko05150,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01504	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
NMKPALMA_01027	4.14e-213	glsA	3.5.1.2	-	E	ko:K01425	ko00220,ko00250,ko00471,ko01100,ko04724,ko04727,ko04964,ko05206,ko05230,map00220,map00250,map00471,map01100,map04724,map04727,map04964,map05206,map05230	ko00000,ko00001,ko01000	Belongs to the glutaminase family
NMKPALMA_01028	0.0	-	-	-	D	-	-	-	Domain of Unknown Function (DUF1542)
NMKPALMA_01029	0.0	cshA	3.6.4.13	-	F	ko:K05592	ko03018,map03018	ko00000,ko00001,ko01000,ko03009,ko03019	DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
NMKPALMA_01030	0.0	murF	6.3.2.10	-	M	ko:K01929	ko00300,ko00550,ko01100,ko01502,map00300,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
NMKPALMA_01031	3.7e-204	htpX	-	-	O	ko:K03799	-	ko00000,ko00002,ko01000,ko01002	Belongs to the peptidase M48B family
NMKPALMA_01032	4.93e-123	lemA	-	-	S	ko:K03744	-	ko00000	LemA family
NMKPALMA_01033	2.23e-111	ptpA	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
NMKPALMA_01034	1.06e-154	-	-	-	G	-	-	-	Belongs to the phosphoglycerate mutase family
NMKPALMA_01035	2.64e-208	fba	4.1.2.13, 4.1.2.29	-	G	ko:K01624,ko:K03339	ko00010,ko00030,ko00051,ko00562,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00562,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Fructose-1,6-bisphosphate aldolase, class II
NMKPALMA_01036	7.09e-178	tpiA	5.3.1.1	-	G	ko:K01803	ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
NMKPALMA_01037	5.24e-192	-	-	-	G	-	-	-	Right handed beta helix region
NMKPALMA_01038	0.0	pps	2.7.9.2	-	H	ko:K01007	ko00620,ko00680,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate
NMKPALMA_01039	5e-161	srtA	3.4.22.70	-	M	ko:K07284	-	ko00000,ko01000,ko01002,ko01011	sortase family
NMKPALMA_01040	8.23e-216	-	-	-	S	-	-	-	Alpha/beta hydrolase of unknown function (DUF915)
NMKPALMA_01041	2.02e-306	pts13C	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
NMKPALMA_01042	9.43e-56	rpmE2	-	-	J	ko:K02909	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L31
NMKPALMA_01043	5.52e-302	murA	2.5.1.7	-	M	ko:K00790	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
NMKPALMA_01044	0.0	pyrG	6.3.4.2	-	F	ko:K01937	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
NMKPALMA_01045	2.68e-80	rpoE	-	-	K	ko:K03048	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko03021,ko03400	Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
NMKPALMA_01046	6.79e-91	ywiB	-	-	S	-	-	-	Domain of unknown function (DUF1934)
NMKPALMA_01047	1.4e-196	lipL	2.3.1.200, 2.3.1.204	-	H	ko:K16869,ko:K18821	-	ko00000,ko01000	biotin lipoate A B protein ligase
NMKPALMA_01048	0.0	ywfO	-	-	S	ko:K06885	-	ko00000	HD domain protein
NMKPALMA_01049	1.14e-190	yidA	-	-	S	-	-	-	hydrolase
NMKPALMA_01050	6.81e-258	rarA	-	-	L	ko:K07478	-	ko00000	recombination factor protein RarA
NMKPALMA_01051	1.6e-100	-	-	-	-	-	-	-	-
NMKPALMA_01052	3.53e-229	prs	2.7.6.1	-	F	ko:K00948	ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
NMKPALMA_01053	4.57e-316	glmU	2.3.1.157, 2.7.7.23	-	M	ko:K04042	ko00520,ko01100,ko01130,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
NMKPALMA_01054	1.21e-189	purR	-	-	F	ko:K09685	-	ko00000,ko03000	pur operon repressor
NMKPALMA_01055	8.69e-166	-	-	-	U	ko:K02075	-	ko00000,ko00002,ko02000	ABC 3 transport family
NMKPALMA_01056	9.8e-158	adcC	-	-	P	ko:K02074,ko:K09817,ko:K11710	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter
NMKPALMA_01057	7.03e-216	psaA	-	-	P	ko:K02077,ko:K11707	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the bacterial solute-binding protein 9 family
NMKPALMA_01058	0.0	-	-	-	L	-	-	-	PFAM transposase, IS4 family protein
NMKPALMA_01059	1.04e-214	glsA	3.5.1.2	-	E	ko:K01425	ko00220,ko00250,ko00471,ko01100,ko04724,ko04727,ko04964,ko05206,ko05230,map00220,map00250,map00471,map01100,map04724,map04727,map04964,map05206,map05230	ko00000,ko00001,ko01000	Belongs to the glutaminase family
NMKPALMA_01060	0.0	-	-	-	L	-	-	-	PFAM transposase, IS4 family protein
NMKPALMA_01062	6.89e-20	-	-	-	S	-	-	-	Protein of unknown function (DUF3990)
NMKPALMA_01063	3.24e-10	-	-	-	-	-	-	-	-
NMKPALMA_01065	0.000411	-	-	-	-	-	-	-	-
NMKPALMA_01070	1.45e-72	-	-	-	L	-	-	-	Resolvase, N terminal domain
NMKPALMA_01072	2.13e-30	-	-	-	S	-	-	-	DNA binding domain, excisionase family
NMKPALMA_01073	7.78e-252	int7	-	-	L	-	-	-	Belongs to the 'phage' integrase family
NMKPALMA_01074	1.27e-110	-	-	-	-	-	-	-	-
NMKPALMA_01075	0.0	-	-	-	L	-	-	-	PFAM transposase, IS4 family protein
NMKPALMA_01076	2.76e-29	-	-	-	D	-	-	-	transport
NMKPALMA_01077	6.87e-230	hepT	2.5.1.30	-	H	ko:K00805	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	Belongs to the FPP GGPP synthase family
NMKPALMA_01078	4.67e-203	menA	2.5.1.74	-	H	ko:K02548	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01006	1,4-dihydroxy-2-naphthoate
NMKPALMA_01079	2.14e-166	menG	2.1.1.163, 2.1.1.201	-	H	ko:K03183	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
NMKPALMA_01080	1.48e-290	mdtG2	-	-	EGP	ko:K08161	-	ko00000,ko02000	Transporter, major facilitator family protein
NMKPALMA_01081	1.94e-212	prpA3	3.1.3.16	-	T	ko:K01090	-	ko00000,ko01000	Calcineurin-like phosphoesterase superfamily domain
NMKPALMA_01082	2.48e-57	rpsN	-	-	J	ko:K02954	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
NMKPALMA_01084	2.05e-153	sdhB	4.3.1.17	-	E	ko:K01752	ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230	ko00000,ko00001,ko01000	Serine dehydratase beta chain
NMKPALMA_01085	7.09e-195	sdaAA	4.3.1.17	-	E	ko:K01752	ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230	ko00000,ko00001,ko01000	L-serine dehydratase, iron-sulfur-dependent, alpha subunit
NMKPALMA_01086	1.88e-135	ahpC	1.11.1.15	-	O	ko:K03386	ko04214,map04214	ko00000,ko00001,ko01000,ko04147	Peroxiredoxin
NMKPALMA_01087	0.0	-	1.8.1.9	-	C	ko:K00384	ko00450,map00450	ko00000,ko00001,ko01000	Thioredoxin domain
NMKPALMA_01088	0.0	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
NMKPALMA_01089	0.0	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
NMKPALMA_01092	1.27e-209	-	-	-	M	-	-	-	transferase activity, transferring glycosyl groups
NMKPALMA_01093	8.24e-190	secY2	-	-	U	-	-	-	Part of the accessory SecA2 SecY2 system specifically required for export of
NMKPALMA_01094	4.16e-245	-	-	-	M	-	-	-	transferase activity, transferring glycosyl groups
NMKPALMA_01095	9.6e-274	asp2	-	-	S	ko:K12269	-	ko00000,ko02044	Accessory Sec system GspB-transporter
NMKPALMA_01096	2.31e-201	asp3	-	-	S	ko:K12270	-	ko00000,ko02044	Accessory Sec secretory system ASP3
NMKPALMA_01097	0.0	secA2	-	-	U	ko:K03070	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
NMKPALMA_01098	6.7e-285	gtf1	2.4.1.52	GT4	M	ko:K00712	-	ko00000,ko01000,ko01003	An N-acetylglucosaminyl transferase that is part of the accessory SecA2 SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon
NMKPALMA_01099	4.52e-246	gtf2	-	-	M	-	-	-	A stabilizing protein that is part of the accessory SecA2 SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon. Stabilizes the glycosylation activity of Gtf1
NMKPALMA_01101	0.0	-	-	-	L	-	-	-	PFAM transposase, IS4 family protein
NMKPALMA_01102	1.43e-124	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
NMKPALMA_01103	2.46e-307	lmrB	-	-	U	ko:K18926	-	ko00000,ko00002,ko02000	Belongs to the major facilitator superfamily
NMKPALMA_01104	0.0	nrdD	1.1.98.6	-	F	ko:K21636	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Ribonucleoside-triphosphate reductase
NMKPALMA_01105	3.94e-144	nrdG	1.97.1.4	-	O	ko:K04068	-	ko00000,ko01000	Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
NMKPALMA_01106	2.23e-204	-	-	-	O	-	-	-	Uncharacterized protein family (UPF0051)
NMKPALMA_01107	2.13e-136	-	-	-	M	-	-	-	LysM domain protein
NMKPALMA_01109	0.0	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
NMKPALMA_01110	0.0	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
NMKPALMA_01112	0.0	-	-	-	L	-	-	-	Transposase
NMKPALMA_01119	9.07e-09	-	-	-	-	-	-	-	-
NMKPALMA_01120	3.12e-73	ysdA	-	-	CP	ko:K01992	-	ko00000,ko00002,ko02000	transmembrane transport
NMKPALMA_01121	1.91e-94	natA	-	-	S	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
NMKPALMA_01129	1.81e-06	-	-	-	-	-	-	-	-
NMKPALMA_01130	8.34e-183	soj	-	-	D	-	-	-	CobQ CobB MinD ParA nucleotide binding domain protein
NMKPALMA_01131	3.83e-51	-	-	-	-	-	-	-	-
NMKPALMA_01132	3.66e-47	-	-	-	S	-	-	-	Flavodoxin-like fold
NMKPALMA_01135	7.59e-138	salB	-	-	V	ko:K20385	ko02024,map02024	ko00000,ko00001	Domain of unknown function (DUF4135)
NMKPALMA_01136	2.79e-214	comA	-	-	V	ko:K06147,ko:K06148,ko:K12292,ko:K20344	ko02010,ko02020,ko02024,map02010,map02020,map02024	ko00000,ko00001,ko01000,ko02000	ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
NMKPALMA_01138	6.05e-20	-	2.7.13.3	-	T	ko:K07706	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	GHKL domain
NMKPALMA_01139	2.08e-22	-	-	-	K	ko:K07707	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko02022	LytTr DNA-binding domain
NMKPALMA_01140	1.96e-56	-	-	-	-	-	-	-	-
NMKPALMA_01141	9.19e-121	-	-	-	L	-	-	-	Integrase
NMKPALMA_01142	3.12e-40	-	-	-	L	ko:K07473	-	ko00000,ko02048	RelB antitoxin
NMKPALMA_01143	4.29e-55	-	-	-	S	ko:K19157	-	ko00000,ko01000,ko02048	Bacterial toxin of type II toxin-antitoxin system, YafQ
NMKPALMA_01145	1.43e-41	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
NMKPALMA_01146	7.4e-87	-	-	-	L	ko:K07491	-	ko00000	PFAM transposase IS200-family protein
NMKPALMA_01147	8.28e-73	folB	1.13.11.81, 4.1.2.25, 5.1.99.8	-	H	ko:K01633	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
NMKPALMA_01148	3.74e-120	folK	2.7.6.3	-	H	ko:K00950	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
NMKPALMA_01149	1.17e-136	folE	2.7.6.3, 3.5.4.16	-	F	ko:K00950,ko:K01495	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	GTP cyclohydrolase 1
NMKPALMA_01150	4.42e-289	folC	6.3.2.12, 6.3.2.17	-	H	ko:K11754	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the folylpolyglutamate synthase family
NMKPALMA_01151	8.19e-134	folQ	3.6.1.66	-	F	ko:K02428	ko00230,map00230	ko00000,ko00001,ko01000	Ham1 family
NMKPALMA_01152	3.22e-268	folP	2.5.1.15	-	H	ko:K00796	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	dihydropteroate synthase
NMKPALMA_01153	4.61e-61	-	-	-	-	-	-	-	-
NMKPALMA_01154	4.26e-54	-	-	-	-	-	-	-	-
NMKPALMA_01156	1.16e-214	ldh	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	Belongs to the LDH MDH superfamily. LDH family
NMKPALMA_01157	1.45e-192	thiD	2.7.1.49, 2.7.4.7	-	H	ko:K00941	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Phosphomethylpyrimidine kinase
NMKPALMA_01158	0.0	argS	6.1.1.19	-	J	ko:K01887	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Arginyl-tRNA synthetase
NMKPALMA_01159	0.0	pbp2A	2.4.1.129, 3.4.16.4	GT51	M	ko:K12555	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01003,ko01011	penicillin-binding protein
NMKPALMA_01160	1.59e-78	yheA	-	-	S	-	-	-	Belongs to the UPF0342 family
NMKPALMA_01161	3.05e-281	yhaO	-	-	L	ko:K03547	-	ko00000,ko03400	Ser Thr phosphatase family protein
NMKPALMA_01162	0.0	yhaN	-	-	L	-	-	-	AAA domain
NMKPALMA_01163	2.29e-177	prsA	5.2.1.8	-	M	ko:K07533	-	ko00000,ko01000,ko03110	Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
NMKPALMA_01165	1.22e-101	hit	-	-	FG	ko:K02503	-	ko00000,ko04147	histidine triad
NMKPALMA_01166	3.83e-175	ecsA	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
NMKPALMA_01167	8.09e-280	ecsB	-	-	U	ko:K01992	-	ko00000,ko00002,ko02000	ABC transporter
NMKPALMA_01168	1.85e-157	trmB	2.1.1.33	-	J	ko:K03439	-	ko00000,ko01000,ko03016	Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
NMKPALMA_01169	0.0	-	-	-	D	-	-	-	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
NMKPALMA_01170	0.0	tagE3	2.4.1.52	GT4	M	ko:K00712	-	ko00000,ko01000,ko01003	Glycosyl transferases group 1
NMKPALMA_01171	2.78e-142	iolS	-	-	C	ko:K06607	-	ko00000,ko01000	Aldo keto reductase
NMKPALMA_01172	1e-68	iolS	-	-	C	ko:K06607	-	ko00000,ko01000	Aldo keto reductase
NMKPALMA_01173	1.79e-215	glsA	3.5.1.2	-	E	ko:K01425	ko00220,ko00250,ko00471,ko01100,ko04724,ko04727,ko04964,ko05206,ko05230,map00220,map00250,map00471,map01100,map04724,map04727,map04964,map05206,map05230	ko00000,ko00001,ko01000	Belongs to the glutaminase family
NMKPALMA_01174	2.27e-75	-	-	-	S	-	-	-	Small secreted protein
NMKPALMA_01175	2.95e-75	ytpP	-	-	CO	-	-	-	Thioredoxin
NMKPALMA_01176	1.63e-152	ytpR	-	-	J	ko:K06878	-	ko00000	Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
NMKPALMA_01177	0.0	murC	6.3.2.8	-	M	ko:K01924	ko00471,ko00550,ko01100,map00471,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Belongs to the MurCDEF family
NMKPALMA_01178	6.48e-154	ybhL	-	-	S	ko:K06890	-	ko00000	Belongs to the BI1 family
NMKPALMA_01179	5.87e-155	-	-	-	S	-	-	-	Protein of unknown function (DUF1275)
NMKPALMA_01180	0.0	polA	2.7.7.7	-	L	ko:K02335	ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440	ko00000,ko00001,ko01000,ko03032,ko03400	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
NMKPALMA_01181	2.74e-204	fpg	3.2.2.23, 4.2.99.18	-	L	ko:K10563	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
NMKPALMA_01182	4.52e-133	coaE	2.7.1.24	-	F	ko:K00859	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
NMKPALMA_01183	1.63e-104	nrdR	-	-	K	ko:K07738	-	ko00000,ko03000	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
NMKPALMA_01184	3.61e-303	dnaB	-	-	L	ko:K03346	-	ko00000,ko03032	replication initiation and membrane attachment
NMKPALMA_01185	1.73e-221	dnaI	-	-	L	ko:K11144	-	ko00000,ko03032	Primosomal protein DnaI
NMKPALMA_01186	1.07e-110	infC	-	-	J	ko:K02520	-	ko00000,ko03012,ko03029	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
NMKPALMA_01187	1.82e-37	rpmI	-	-	J	ko:K02916	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL35 family
NMKPALMA_01188	5.46e-74	rplT	-	-	J	ko:K02887	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
NMKPALMA_01189	7.78e-125	yqeG	-	-	S	ko:K07015	-	ko00000	HAD phosphatase, family IIIA
NMKPALMA_01190	5.44e-279	yqeH	-	-	S	ko:K06948	-	ko00000,ko03009	Ribosome biogenesis GTPase YqeH
NMKPALMA_01191	5.4e-63	yhbY	-	-	J	ko:K07574	-	ko00000,ko03009	RNA-binding protein
NMKPALMA_01192	4.9e-158	nadD	2.7.7.18	-	H	ko:K00969	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
NMKPALMA_01193	8.83e-147	yqeK	-	-	H	-	-	-	Hydrolase, HD family
NMKPALMA_01194	2.69e-79	rsfS	-	-	J	ko:K09710	-	ko00000,ko03009	Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
NMKPALMA_01195	4.27e-172	yqeM	-	-	Q	-	-	-	Methyltransferase
NMKPALMA_01196	4.23e-268	ylbM	-	-	S	-	-	-	Belongs to the UPF0348 family
NMKPALMA_01197	1.01e-129	ylbN	-	-	S	ko:K07040	-	ko00000	Uncharacterized ACR, COG1399
NMKPALMA_01198	7.21e-39	rpmF	-	-	J	ko:K02911	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Belongs to the bacterial ribosomal protein bL32 family
NMKPALMA_01199	3.96e-155	csrR	-	-	K	-	-	-	response regulator
NMKPALMA_01200	0.0	arlS	2.7.13.3	-	T	ko:K18940	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
NMKPALMA_01201	0.0	potE	-	-	E	-	-	-	Amino Acid
NMKPALMA_01202	4.14e-295	-	-	-	V	-	-	-	MatE
NMKPALMA_01203	5.74e-94	def2	3.5.1.88	-	J	ko:K01462	-	ko00000,ko01000	Removes the formyl group from the N-terminal Met of newly synthesized proteins
NMKPALMA_01204	1.3e-213	yidC	-	-	U	ko:K03217	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044,ko03029	Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
NMKPALMA_01205	8.53e-59	acyP	3.6.1.7	-	C	ko:K01512	ko00620,ko00627,ko01120,map00620,map00627,map01120	ko00000,ko00001,ko01000	Belongs to the acylphosphatase family
NMKPALMA_01206	2.71e-186	spoU	-	-	J	ko:K03437	-	ko00000,ko03016	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
NMKPALMA_01207	3.75e-119	XK27_09705	-	-	S	ko:K06950	-	ko00000	Metal dependent phosphohydrolases with conserved 'HD' motif.
NMKPALMA_01208	3.36e-77	yodB	-	-	K	-	-	-	Transcriptional regulator, HxlR family
NMKPALMA_01209	2.12e-251	pheS	6.1.1.20	-	J	ko:K01889	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
NMKPALMA_01210	0.0	pheT	6.1.1.20	-	J	ko:K01890	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
NMKPALMA_01211	5.07e-150	-	-	-	M	-	-	-	PFAM NLP P60 protein
NMKPALMA_01212	2.06e-152	udk	2.7.1.48	-	F	ko:K00876	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	Cytidine monophosphokinase
NMKPALMA_01213	6.08e-102	greA	-	-	K	ko:K03624	-	ko00000,ko03021	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
NMKPALMA_01214	7.71e-91	yneR	-	-	S	-	-	-	Belongs to the HesB IscA family
NMKPALMA_01215	0.0	-	-	-	S	-	-	-	membrane
NMKPALMA_01216	0.0	pbp2b	-	-	M	ko:K00687,ko:K12553,ko:K21465,ko:K21466	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01011	Penicillin-binding Protein
NMKPALMA_01217	1.53e-29	rpmG	-	-	J	ko:K02913	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL33 family
NMKPALMA_01218	1.38e-131	fthC	6.3.3.2	-	H	ko:K01934	ko00670,ko01100,map00670,map01100	ko00000,ko00001,ko01000	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
NMKPALMA_01219	6.03e-141	gluP	3.4.21.105	-	S	ko:K19225	-	ko00000,ko01000,ko01002	Peptidase, S54 family
NMKPALMA_01220	4.1e-47	yqgQ	-	-	S	-	-	-	Bacterial protein of unknown function (DUF910)
NMKPALMA_01221	1.02e-234	glcK	2.7.1.2	-	G	ko:K00845	ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Glucokinase
NMKPALMA_01222	4.44e-87	yqhL	-	-	P	-	-	-	Rhodanese-like protein
NMKPALMA_01223	1.18e-30	-	-	-	S	-	-	-	Protein of unknown function (DUF3042)
NMKPALMA_01224	3.96e-224	miaA	2.5.1.75	-	F	ko:K00791	ko00908,ko01100,ko01110,map00908,map01100,map01110	ko00000,ko00001,ko01000,ko01006,ko03016	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
NMKPALMA_01225	0.0	glnA	6.3.1.2	-	E	ko:K01915	ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727	ko00000,ko00001,ko01000,ko04147	glutamine synthetase
NMKPALMA_01226	0.0	gltX	6.1.1.24	-	J	ko:K09698	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
NMKPALMA_01227	3.68e-277	araT	2.6.1.57	-	E	ko:K00832,ko:K00841	ko00270,ko00300,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01230,map00270,map00300,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase
NMKPALMA_01228	1.28e-18	-	-	-	-	-	-	-	-
NMKPALMA_01229	1.19e-197	-	-	-	P	ko:K02073	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the nlpA lipoprotein family
NMKPALMA_01231	1.53e-61	-	-	-	-	ko:K19167	-	ko00000,ko02048	-
NMKPALMA_01232	5.3e-68	-	-	-	L	-	-	-	four-way junction helicase activity
NMKPALMA_01235	6.29e-32	-	-	-	T	ko:K07171	-	ko00000,ko01000,ko02048	PemK-like, MazF-like toxin of type II toxin-antitoxin system
NMKPALMA_01236	1.03e-14	-	-	-	T	-	-	-	SpoVT / AbrB like domain
NMKPALMA_01239	9.22e-79	-	-	-	-	-	-	-	-
NMKPALMA_01244	1.1e-122	-	-	-	V	-	-	-	N-6 DNA Methylase
NMKPALMA_01245	0.0	-	-	-	L	-	-	-	PFAM transposase, IS4 family protein
NMKPALMA_01246	1.41e-79	-	-	-	L	ko:K07491	-	ko00000	PFAM transposase IS200-family protein
NMKPALMA_01247	1.43e-41	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
NMKPALMA_01248	1.29e-235	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
NMKPALMA_01249	1e-72	-	-	-	-	-	-	-	-
NMKPALMA_01250	2.45e-88	gtcA	-	-	S	-	-	-	Teichoic acid glycosylation protein
NMKPALMA_01251	4.7e-103	ykuP	-	-	C	ko:K03839	-	ko00000	Flavodoxin
NMKPALMA_01252	4.96e-216	map	3.4.11.18	-	E	ko:K01265	-	ko00000,ko01000,ko01002	Methionine Aminopeptidase
NMKPALMA_01253	2.4e-281	arcT	-	-	E	-	-	-	Aminotransferase
NMKPALMA_01254	0.0	arcD	-	-	E	ko:K03758	-	ko00000,ko02000	Arginine ornithine antiporter
NMKPALMA_01255	0.0	potE	-	-	E	-	-	-	Amino Acid
NMKPALMA_01256	2.59e-199	rbn	-	-	S	ko:K07058	-	ko00000	Belongs to the UPF0761 family
NMKPALMA_01257	1.26e-46	-	-	-	S	-	-	-	Protein of unknown function (DUF2922)
NMKPALMA_01258	2.53e-42	-	-	-	-	-	-	-	-
NMKPALMA_01259	1.04e-177	recX	-	-	S	ko:K03565	-	ko00000,ko03400	Regulatory protein RecX
NMKPALMA_01260	1.11e-188	cps1D	-	-	M	-	-	-	Domain of unknown function (DUF4422)
NMKPALMA_01261	4.62e-224	yfdH	-	GT2	M	ko:K12999	-	ko00000,ko01000,ko01003,ko01005	Glycosyltransferase, group 2 family protein
NMKPALMA_01262	1.63e-152	-	-	-	M	-	-	-	Bacterial sugar transferase
NMKPALMA_01263	1.88e-273	glf	5.4.99.9	-	M	ko:K01854	ko00052,ko00520,map00052,map00520	ko00000,ko00001,ko01000	UDP-galactopyranose mutase
NMKPALMA_01264	6.99e-304	cps1C	-	-	S	ko:K03328	-	ko00000	Membrane protein involved in the export of O-antigen and teichoic acid
NMKPALMA_01265	2.82e-190	-	-	GT4	M	ko:K02840	ko00540,ko01100,map00540,map01100	ko00000,ko00001,ko00002,ko01000,ko01003,ko01005	Glycosyl transferases group 1
NMKPALMA_01266	4.08e-167	-	-	-	M	-	-	-	transferase activity, transferring glycosyl groups
NMKPALMA_01267	7.97e-150	-	-	-	M	ko:K21471	-	ko00000,ko01000,ko01002,ko01011	NLP P60 protein
NMKPALMA_01269	6.31e-127	-	-	-	S	-	-	-	enterobacterial common antigen metabolic process
NMKPALMA_01270	2.12e-235	cps3F	-	-	-	-	-	-	-
NMKPALMA_01271	1.99e-109	-	-	-	M	-	-	-	biosynthesis protein
NMKPALMA_01273	7.35e-54	-	-	-	M	-	-	-	KxYKxGKxW signal domain protein
NMKPALMA_01274	0.0	-	-	-	L	-	-	-	Transposase
NMKPALMA_01275	1.97e-53	-	-	-	S	-	-	-	Protein of unknown function (DUF1797)
NMKPALMA_01276	2.19e-227	mprF	-	-	I	ko:K07027	-	ko00000,ko02000	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
NMKPALMA_01277	4.82e-254	cpoA	2.4.1.208	GT4	M	ko:K13677,ko:K13678	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000,ko01003	Glycosyltransferase, group 1 family protein
NMKPALMA_01278	2.79e-294	pimB	2.4.1.337	GT4	M	ko:K19002	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000,ko01003	Glycosyltransferase, group 1 family protein
NMKPALMA_01279	0.0	ptsI	2.7.3.9	-	G	ko:K08483	ko02060,map02060	ko00000,ko00001,ko01000,ko02000	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
NMKPALMA_01280	3.69e-54	ptsH	-	-	G	ko:K11189	-	ko00000,ko02000	phosphocarrier protein HPR
NMKPALMA_01281	1.38e-37	-	-	-	-	-	-	-	-
NMKPALMA_01282	0.0	clpE	-	-	O	ko:K03697,ko:K04086	-	ko00000,ko03110	Belongs to the ClpA ClpB family
NMKPALMA_01283	3.02e-128	-	-	-	S	-	-	-	Pfam:DUF3816
NMKPALMA_01284	9.48e-183	-	-	-	G	-	-	-	MucBP domain
NMKPALMA_01285	3.49e-149	-	-	-	-	-	-	-	-
NMKPALMA_01286	2.39e-195	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
NMKPALMA_01287	7.18e-86	-	-	-	K	-	-	-	Transcriptional regulator, GntR family
NMKPALMA_01288	9.52e-60	-	-	-	V	-	-	-	the current gene model (or a revised gene model) may contain a frame shift
NMKPALMA_01289	7.16e-66	-	-	-	M	-	-	-	Peptidase_C39 like family
NMKPALMA_01290	0.0	prfC	-	-	J	ko:K02837	-	ko00000,ko03012	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
NMKPALMA_01291	4.9e-25	-	-	-	-	-	-	-	-
NMKPALMA_01292	1.3e-117	-	-	-	M	-	-	-	Glycosyl transferase family 2
NMKPALMA_01293	2.91e-302	brpA	-	-	K	-	-	-	Cell envelope-like function transcriptional attenuator common domain protein
NMKPALMA_01294	9.19e-233	yueF	-	-	S	-	-	-	AI-2E family transporter
NMKPALMA_01295	3.67e-80	-	-	-	S	ko:K21471	-	ko00000,ko01000,ko01002,ko01011	dextransucrase activity
NMKPALMA_01296	6.37e-59	-	-	-	S	-	-	-	Bacterial membrane protein, YfhO
NMKPALMA_01297	1.9e-150	-	-	-	M	-	-	-	Glycosyltransferase like family 2
NMKPALMA_01298	2.05e-36	-	-	-	-	-	-	-	-
NMKPALMA_01299	3.04e-154	-	-	-	M	ko:K21471	-	ko00000,ko01000,ko01002,ko01011	NLP P60 protein
NMKPALMA_01300	0.0	-	-	-	L	-	-	-	PFAM RNA-directed DNA polymerase (Reverse transcriptase)
NMKPALMA_01301	5.9e-44	-	-	-	S	-	-	-	CHC2 zinc finger
NMKPALMA_01303	8.28e-262	-	2.7.7.7	-	L	ko:K02337	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase
NMKPALMA_01307	3.34e-29	-	-	-	S	-	-	-	Protein of unknown function (DUF1064)
NMKPALMA_01311	2.5e-76	-	2.1.1.37	-	H	ko:K00558	ko00270,ko01100,ko05206,map00270,map01100,map05206	ko00000,ko00001,ko00002,ko01000,ko02048,ko03032,ko03036	Methyltransferase
NMKPALMA_01312	6.37e-57	-	-	-	L	-	-	-	C-5 cytosine-specific DNA methylase
NMKPALMA_01318	1.43e-20	-	-	-	-	-	-	-	-
NMKPALMA_01322	5.02e-67	-	2.7.6.1	-	EF	ko:K00948	ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
NMKPALMA_01323	2.67e-130	-	-	-	S	-	-	-	nicotinate-nucleotide diphosphorylase (carboxylating) activity
NMKPALMA_01326	7.33e-43	pgpA	-	-	I	-	-	-	Phosphatidylglycerophosphatase A
NMKPALMA_01328	2.27e-72	tdk	2.7.1.21	-	F	ko:K00857	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	Thymidine kinase
NMKPALMA_01329	7.4e-41	-	-	-	M	-	-	-	LysM domain protein
NMKPALMA_01330	4.48e-107	-	-	-	L	-	-	-	Integrase
NMKPALMA_01344	1.04e-98	ntd	2.4.2.6	-	F	ko:K08728	ko00240,map00240	ko00000,ko00001,ko01000	Nucleoside
NMKPALMA_01361	3.43e-112	dgk1	2.7.1.76	-	F	ko:K10353	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000	deoxynucleoside kinase
NMKPALMA_01372	1.01e-18	-	-	-	S	-	-	-	HNH endonuclease
NMKPALMA_01375	1.7e-10	-	-	-	S	-	-	-	electron carrier activity
NMKPALMA_01377	1.02e-143	pnuC	-	-	H	ko:K03811	-	ko00000,ko02000	nicotinamide mononucleotide transporter
NMKPALMA_01379	3.29e-104	-	-	-	O	-	-	-	COG0330 Membrane protease subunits, stomatin prohibitin homologs
NMKPALMA_01382	1.37e-104	-	3.1.11.5	-	L	ko:K01144,ko:K03581	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
NMKPALMA_01385	8.3e-119	-	-	-	L	-	-	-	DnaB-like helicase C terminal domain
NMKPALMA_01388	1.46e-70	-	-	-	S	-	-	-	hydrolase activity
NMKPALMA_01389	5.16e-21	-	-	-	L	-	-	-	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
NMKPALMA_01394	1.83e-113	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
NMKPALMA_01396	5.74e-71	-	-	-	-	-	-	-	-
NMKPALMA_01397	2.7e-29	-	-	-	T	ko:K07171	-	ko00000,ko01000,ko02048	PemK-like, MazF-like toxin of type II toxin-antitoxin system
NMKPALMA_01401	1.67e-54	-	-	-	S	ko:K07341	-	ko00000,ko02048	Fic/DOC family
NMKPALMA_01414	6.49e-17	-	-	-	S	-	-	-	Antirestriction protein (ArdA)
NMKPALMA_01421	8.27e-91	soj	-	-	D	-	-	-	CobQ CobB MinD ParA nucleotide binding domain protein
NMKPALMA_01428	3.07e-12	-	-	-	-	-	-	-	-
NMKPALMA_01429	1.07e-175	-	-	-	S	-	-	-	Terminase-like family
NMKPALMA_01433	1.16e-75	-	-	-	-	-	-	-	-
NMKPALMA_01434	5.4e-199	tnpB	-	-	L	ko:K07496	-	ko00000	Putative transposase DNA-binding domain
NMKPALMA_01440	8.64e-24	-	-	-	-	-	-	-	-
NMKPALMA_01441	4.55e-43	-	-	-	-	-	-	-	-
NMKPALMA_01443	1.4e-10	-	-	-	-	-	-	-	-
NMKPALMA_01445	3.52e-15	-	-	-	S	-	-	-	COG5546 Small integral membrane protein
NMKPALMA_01448	4.67e-97	xerH	-	-	L	ko:K03733,ko:K04763	-	ko00000,ko03036	Belongs to the 'phage' integrase family
NMKPALMA_01449	5.23e-75	-	-	-	D	-	-	-	Phage-related minor tail protein
NMKPALMA_01452	2.46e-82	-	-	-	-	-	-	-	-
NMKPALMA_01458	1.12e-115	-	-	-	S	-	-	-	peptidoglycan catabolic process
NMKPALMA_01459	8.75e-08	-	-	-	-	-	-	-	-
NMKPALMA_01461	1.83e-149	dedA	-	-	S	ko:K03975	-	ko00000	SNARE-like domain protein
NMKPALMA_01462	4.36e-133	-	-	-	S	-	-	-	Protein of unknown function (DUF1461)
NMKPALMA_01463	4.08e-171	nagD	3.1.3.41	-	G	ko:K01101	ko00627,ko01120,map00627,map01120	ko00000,ko00001,ko01000	Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
NMKPALMA_01464	2.66e-120	yutD	-	-	S	-	-	-	Protein of unknown function (DUF1027)
NMKPALMA_01465	1.21e-143	-	-	-	S	-	-	-	Calcineurin-like phosphoesterase
NMKPALMA_01466	1.52e-283	ackA	2.7.2.1	-	F	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
NMKPALMA_01467	5.09e-186	ytxK	2.1.1.72	-	L	ko:K00571	-	ko00000,ko01000,ko02048	N-6 DNA Methylase
NMKPALMA_01469	1.88e-91	-	-	-	-	ko:K02248	-	ko00000,ko00002,ko02044	-
NMKPALMA_01470	2.38e-56	-	-	-	-	-	-	-	-
NMKPALMA_01471	1.43e-100	-	-	-	NU	ko:K02246	-	ko00000,ko00002,ko02044	general secretion pathway protein
NMKPALMA_01472	6.31e-62	comGC	-	-	U	ko:K02245	-	ko00000,ko00002,ko02044	competence protein ComGC
NMKPALMA_01473	1.34e-236	comGB	-	-	NU	ko:K02244	-	ko00000,ko00002,ko02044	type II secretion system
NMKPALMA_01474	8.07e-233	comGA	-	-	NU	ko:K02243	-	ko00000,ko00002,ko02044	Type II IV secretion system protein
NMKPALMA_01475	2.47e-168	yebC	-	-	K	-	-	-	Transcriptional regulatory protein
NMKPALMA_01476	1.57e-176	-	-	-	-	-	-	-	-
NMKPALMA_01477	1.1e-231	ccpA	-	-	K	ko:K02529	-	ko00000,ko03000	catabolite control protein A
NMKPALMA_01478	8.87e-269	pepQ	3.4.13.9	-	E	ko:K01271	-	ko00000,ko01000,ko01002	Creatinase/Prolidase N-terminal domain
NMKPALMA_01479	1.84e-75	-	-	-	-	-	-	-	-
NMKPALMA_01480	1.54e-71	ytxG	-	-	S	-	-	-	protein containing a divergent version of the methyl-accepting chemotaxis-like domain
NMKPALMA_01481	6.5e-190	ykuT	-	-	M	ko:K16052,ko:K22044	-	ko00000,ko02000	mechanosensitive ion channel
NMKPALMA_01482	1.1e-195	-	-	-	S	-	-	-	haloacid dehalogenase-like hydrolase
NMKPALMA_01483	3.48e-98	ykuL	-	-	S	-	-	-	(CBS) domain
NMKPALMA_01484	5.74e-121	-	-	-	S	ko:K07095	-	ko00000	Phosphoesterase
NMKPALMA_01485	4.93e-135	rdgB	3.6.1.66	-	F	ko:K02428	ko00230,map00230	ko00000,ko00001,ko01000	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
NMKPALMA_01486	1.82e-184	murI	3.6.1.66, 5.1.1.3	-	M	ko:K01776,ko:K02428	ko00230,ko00471,ko01100,map00230,map00471,map01100	ko00000,ko00001,ko01000,ko01011	Provides the (R)-glutamate required for cell wall biosynthesis
NMKPALMA_01487	6.07e-126	yslB	-	-	S	-	-	-	Protein of unknown function (DUF2507)
NMKPALMA_01488	9.61e-71	trxA	-	-	O	ko:K03671	ko04621,ko05418,map04621,map05418	ko00000,ko00001,ko03110	Belongs to the thioredoxin family
NMKPALMA_01489	0.0	mutS2	-	-	L	ko:K07456	ko03430,map03430	ko00000,ko00001,ko03400	Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
NMKPALMA_01490	7.15e-122	cvpA	-	-	S	-	-	-	Colicin V production protein
NMKPALMA_01491	3.75e-63	yrzB	-	-	S	-	-	-	Belongs to the UPF0473 family
NMKPALMA_01492	3.62e-100	yrrK	-	-	J	ko:K07447	-	ko00000,ko01000	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
NMKPALMA_01493	8.03e-58	yrzL	-	-	S	-	-	-	Belongs to the UPF0297 family
NMKPALMA_01494	0.0	alaS	6.1.1.7	-	J	ko:K01872	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
NMKPALMA_01495	0.0	cshB	3.6.4.13	-	JKL	ko:K05592,ko:K18692	ko03018,map03018	ko00000,ko00001,ko01000,ko03009,ko03019	DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
NMKPALMA_01496	2.15e-234	nrnA	3.1.13.3, 3.1.3.7	-	S	ko:K06881	ko00920,ko01100,ko01120,map00920,map01100,map01120	ko00000,ko00001,ko01000,ko03400	DHHA1 domain protein
NMKPALMA_01497	7.54e-62	yajC	-	-	U	ko:K03210	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Preprotein translocase
NMKPALMA_01498	2.79e-254	tgt	2.4.2.29	-	F	ko:K00773	-	ko00000,ko01000,ko03016	Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
NMKPALMA_01499	1.16e-243	ruvB	3.6.4.12	-	L	ko:K03551	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
NMKPALMA_01500	3.72e-132	ruvA	3.6.4.12	-	L	ko:K03550	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
NMKPALMA_01501	0.0	mutL	-	-	L	ko:K03572	ko03430,map03430	ko00000,ko00001,ko03400	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
NMKPALMA_01502	0.0	mutS	-	-	L	ko:K03555	ko03430,map03430	ko00000,ko00001,ko03400	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
NMKPALMA_01503	2.29e-276	rny	-	-	S	ko:K18682	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	Endoribonuclease that initiates mRNA decay
NMKPALMA_01504	7.67e-252	recA	-	-	L	ko:K03553	ko03440,map03440	ko00000,ko00001,ko00002,ko03400	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
NMKPALMA_01505	1.26e-286	cinA	3.5.1.42	-	S	ko:K03742,ko:K03743	ko00760,map00760	ko00000,ko00001,ko01000	Belongs to the CinA family
NMKPALMA_01506	9.56e-133	pgsA	2.7.8.5	-	I	ko:K00995	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
NMKPALMA_01507	1.97e-195	-	-	-	S	-	-	-	Helix-turn-helix domain
NMKPALMA_01508	7.41e-315	ymfH	-	-	S	-	-	-	Peptidase M16
NMKPALMA_01509	3.38e-291	ymfF	-	-	S	-	-	-	Peptidase M16 inactive domain protein
NMKPALMA_01510	4.04e-205	aatB	-	-	ET	ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter substrate-binding protein
NMKPALMA_01511	7.19e-152	glnQ	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
NMKPALMA_01512	3.13e-141	yecS_2	-	-	P	ko:K02029,ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter permease
NMKPALMA_01513	1.69e-120	mreD	-	-	M	ko:K03571	-	ko00000,ko03036	rod shape-determining protein MreD
NMKPALMA_01514	2.69e-195	mreC	-	-	M	ko:K03570	-	ko00000,ko03036	Involved in formation and maintenance of cell shape
NMKPALMA_01515	8.33e-230	mreB	-	-	D	ko:K03569	-	ko00000,ko02048,ko03036,ko04812	cell shape determining protein MreB
NMKPALMA_01516	6.98e-156	radC	-	-	L	ko:K03630	-	ko00000	DNA repair protein
NMKPALMA_01517	2.04e-310	folC	6.3.2.12, 6.3.2.17	-	H	ko:K11754	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the folylpolyglutamate synthase family
NMKPALMA_01518	6.33e-295	yumB	1.6.99.3	-	C	ko:K03885	ko00190,map00190	ko00000,ko00001,ko01000	NADH dehydrogenase
NMKPALMA_01519	0.0	cydD	-	-	CO	ko:K16012	ko02010,map02010	ko00000,ko00001,ko02000	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
NMKPALMA_01520	0.0	cydC	-	-	CO	ko:K16013	ko02010,map02010	ko00000,ko00001,ko02000	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
NMKPALMA_01521	1.4e-235	cydB	1.10.3.14	-	C	ko:K00426	ko00190,ko01100,ko02020,map00190,map01100,map02020	ko00000,ko00001,ko00002,ko01000	Cytochrome d ubiquinol oxidase subunit II
NMKPALMA_01522	0.0	cydA	1.10.3.14	-	C	ko:K00425	ko00190,ko01100,ko02020,map00190,map01100,map02020	ko00000,ko00001,ko00002,ko01000	ubiquinol oxidase
NMKPALMA_01523	0.0	valS	6.1.1.9	-	J	ko:K01873	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
NMKPALMA_01524	2.37e-291	thiI	2.8.1.4	-	H	ko:K03151	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko03016	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
NMKPALMA_01525	4.79e-272	iscS2	2.8.1.7	-	E	ko:K04487	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko02048,ko03016,ko03029	Aminotransferase class V
NMKPALMA_01526	0.0	ezrA	-	-	D	ko:K06286	-	ko00000,ko03036	modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
NMKPALMA_01527	6.96e-138	rpsD	-	-	J	ko:K02986	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
NMKPALMA_01528	0.0	gadC	-	-	E	ko:K20265	ko02024,map02024	ko00000,ko00001,ko02000	amino acid
NMKPALMA_01529	6.76e-213	lacX	5.1.3.3	-	G	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Aldose 1-epimerase
NMKPALMA_01530	0.0	topA	5.99.1.2	-	L	ko:K03168	-	ko00000,ko01000,ko03032,ko03400	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
NMKPALMA_01531	2.25e-206	dprA	-	-	LU	ko:K04096	-	ko00000	DNA protecting protein DprA
NMKPALMA_01532	2.13e-182	rnhB	3.1.26.4	-	L	ko:K03470	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
NMKPALMA_01533	5.1e-207	rbgA	-	-	S	ko:K14540	-	ko00000,ko03009	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
NMKPALMA_01534	1.33e-47	yozE	-	-	S	-	-	-	Belongs to the UPF0346 family
NMKPALMA_01535	2.34e-140	ypmS	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2140)
NMKPALMA_01536	1.08e-217	-	-	-	E	-	-	-	lipolytic protein G-D-S-L family
NMKPALMA_01537	1.1e-196	WQ51_01275	-	-	S	-	-	-	EDD domain protein, DegV family
NMKPALMA_01538	2.59e-144	hlyIII	-	-	S	ko:K11068	-	ko00000,ko02042	protein, hemolysin III
NMKPALMA_01539	4.1e-120	folA	1.5.1.3	-	H	ko:K00287	ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523	ko00000,ko00001,ko00002,ko01000	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
NMKPALMA_01540	3.61e-247	thyA	2.1.1.45	-	F	ko:K00560	ko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523	ko00000,ko00001,ko00002,ko01000	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
NMKPALMA_01541	0.0	yfmR	-	-	S	ko:K15738	-	ko00000,ko02000	ABC transporter, ATP-binding protein
NMKPALMA_01542	5.15e-289	cca	2.7.7.72	-	J	ko:K00974	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
NMKPALMA_01543	9.5e-301	XK27_05225	-	-	S	-	-	-	Tetratricopeptide repeat protein
NMKPALMA_01544	1.6e-54	hup	-	-	L	ko:K03530	-	ko00000,ko03032,ko03036,ko03400	Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
NMKPALMA_01545	1.9e-316	der	-	-	S	ko:K03977	-	ko00000,ko03009	GTPase that plays an essential role in the late steps of ribosome biogenesis
NMKPALMA_01546	1.49e-274	rpsA	-	-	J	ko:K02945	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein S1
NMKPALMA_01547	6.29e-152	cmk	2.7.4.25	-	F	ko:K00945	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the cytidylate kinase family. Type 1 subfamily
NMKPALMA_01548	5.91e-64	-	-	-	M	-	-	-	Lysin motif
NMKPALMA_01549	0.0	recQ	3.6.4.12	-	L	ko:K03654	ko03018,map03018	ko00000,ko00001,ko01000,ko03400	ATP-dependent DNA helicase RecQ
NMKPALMA_01550	9.25e-247	-	-	-	S	-	-	-	Helix-turn-helix domain
NMKPALMA_01551	1.79e-131	ribU	-	-	U	-	-	-	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
NMKPALMA_01552	5.84e-164	rluB	5.4.99.22	-	J	ko:K06178	-	ko00000,ko01000,ko03009	Belongs to the pseudouridine synthase RsuA family
NMKPALMA_01553	1.35e-135	scpB	-	-	D	ko:K06024	-	ko00000,ko03036	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
NMKPALMA_01554	7.93e-177	scpA	-	-	D	ko:K05896	-	ko00000,ko03036	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
NMKPALMA_01555	7.13e-84	ribT	-	-	K	ko:K02859	-	ko00000	COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
NMKPALMA_01556	5.76e-212	xerD	-	-	D	ko:K04763	-	ko00000,ko03036	recombinase XerD
NMKPALMA_01557	2.27e-216	yitL	-	-	S	ko:K00243	-	ko00000	S1 domain
NMKPALMA_01558	0.0	pyk	2.7.1.40	-	G	ko:K00873	ko00010,ko00230,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko04930,ko05165,ko05203,ko05230,map00010,map00230,map00620,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map04930,map05165,map05203,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Belongs to the pyruvate kinase family
NMKPALMA_01559	0.0	dnaE	2.7.7.7	-	L	ko:K02337	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase
NMKPALMA_01560	7.94e-42	-	-	-	S	-	-	-	Protein of unknown function (DUF2929)
NMKPALMA_01561	1.35e-302	pepT	3.4.11.4	-	E	ko:K01258	-	ko00000,ko01000,ko01002	Cleaves the N-terminal amino acid of tripeptides
NMKPALMA_01562	2.32e-195	yqfO	-	-	S	-	-	-	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
NMKPALMA_01563	1.61e-162	trmK	2.1.1.217	-	S	ko:K06967	-	ko00000,ko01000,ko03016	SAM-dependent methyltransferase
NMKPALMA_01564	2.06e-279	aspC	-	-	E	ko:K00841	ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase
NMKPALMA_01565	5.12e-266	sigA	-	-	K	ko:K03086	-	ko00000,ko03021	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
NMKPALMA_01566	0.0	dnaG	-	-	L	ko:K02316	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
NMKPALMA_01567	0.0	glyS	6.1.1.14	-	J	ko:K01879	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Glycyl-tRNA synthetase beta subunit
NMKPALMA_01568	2.14e-234	glyQ	6.1.1.14	-	J	ko:K01878	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	glycyl-tRNA synthetase alpha subunit
NMKPALMA_01569	1.24e-188	recO	-	-	L	ko:K03584	ko03440,map03440	ko00000,ko00001,ko03400	Involved in DNA repair and RecF pathway recombination
NMKPALMA_01570	1.27e-217	era	-	-	S	ko:K03595	-	ko00000,ko03009,ko03029	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
NMKPALMA_01571	1.8e-81	dgkA	2.7.1.107, 2.7.1.66	-	M	ko:K00887,ko:K00901	ko00550,ko00561,ko00564,ko01100,ko01110,ko04070,ko04072,ko05231,map00550,map00561,map00564,map01100,map01110,map04070,map04072,map05231	ko00000,ko00001,ko01000	Diacylglycerol kinase
NMKPALMA_01572	1.81e-108	ybeY	-	-	S	ko:K07042	-	ko00000,ko03009	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
NMKPALMA_01573	6.39e-235	phoH	-	-	T	ko:K06217	-	ko00000	phosphate starvation-inducible protein PhoH
NMKPALMA_01574	6.94e-78	birA	6.3.4.15	-	H	ko:K03524	ko00780,ko01100,map00780,map01100	ko00000,ko00001,ko01000,ko03000	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
NMKPALMA_01575	0.0	-	-	-	L	-	-	-	PFAM transposase, IS4 family protein
NMKPALMA_01595	1.31e-103	traP	1.14.99.57	-	S	ko:K21481	-	ko00000,ko01000	enzyme involved in biosynthesis of extracellular polysaccharides
NMKPALMA_01596	4.08e-88	spxA	-	-	K	ko:K16509	-	ko00000	Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
NMKPALMA_01597	5.67e-157	mecA	-	-	NOT	ko:K16511	-	ko00000	Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
NMKPALMA_01598	2.13e-258	coiA	-	-	S	ko:K06198	-	ko00000	Competence protein
NMKPALMA_01599	0.0	pepDA	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
NMKPALMA_01600	1.4e-147	yjbH	-	-	Q	-	-	-	Thioredoxin
NMKPALMA_01601	1.29e-150	yjbM	2.7.6.5	-	S	ko:K07816	ko00230,map00230	ko00000,ko00001,ko01000	RelA SpoT domain protein
NMKPALMA_01602	2.07e-196	nadK	2.7.1.23	-	F	ko:K00858	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
NMKPALMA_01603	2.66e-219	yjbO	5.4.99.23	-	G	ko:K06180	-	ko00000,ko01000,ko03009	Responsible for synthesis of pseudouridine from uracil
NMKPALMA_01606	1.82e-21	-	-	-	K	-	-	-	Cro/C1-type HTH DNA-binding domain
NMKPALMA_01609	0.0	dtpT	-	-	U	ko:K03305	-	ko00000	amino acid peptide transporter
NMKPALMA_01610	9.32e-187	-	-	-	S	-	-	-	Calcineurin-like phosphoesterase
NMKPALMA_01613	9.37e-145	-	-	-	-	-	-	-	-
NMKPALMA_01614	8.92e-317	-	-	-	EGP	-	-	-	Major Facilitator
NMKPALMA_01615	0.0	-	-	-	P	ko:K07085	-	ko00000	Predicted Permease Membrane Region
NMKPALMA_01616	3.53e-168	racX	5.1.1.13	-	M	ko:K01779	ko00250,ko01054,map00250,map01054	ko00000,ko00001,ko01000	Belongs to the aspartate glutamate racemases family
NMKPALMA_01617	3.54e-165	yvoA_2	-	-	K	ko:K03710	-	ko00000,ko03000	UbiC transcription regulator-associated domain protein
NMKPALMA_01618	0.0	pncB	6.3.4.21	-	F	ko:K00763	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
NMKPALMA_01619	1.51e-196	nadE	6.3.1.5	-	F	ko:K01916	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
NMKPALMA_01620	0.0	tex	-	-	K	ko:K06959	-	ko00000	Tex-like protein N-terminal domain protein
NMKPALMA_01621	3.74e-108	ydcK	-	-	S	ko:K03095	-	ko00000	Belongs to the SprT family
NMKPALMA_01623	8.5e-116	-	-	-	S	-	-	-	Protein conserved in bacteria
NMKPALMA_01624	5.01e-231	-	-	-	-	-	-	-	-
NMKPALMA_01625	1.98e-202	-	-	-	-	-	-	-	-
NMKPALMA_01626	1.27e-66	yitW	-	-	S	-	-	-	Iron-sulfur cluster assembly protein
NMKPALMA_01627	5.49e-129	msrA	1.8.4.11	-	C	ko:K07304	-	ko00000,ko01000	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
NMKPALMA_01628	9.4e-99	-	-	-	S	-	-	-	Fic/DOC family
NMKPALMA_01632	0.000969	ydiL	-	-	S	ko:K07052	-	ko00000	protease
NMKPALMA_01635	1.79e-64	yocA	-	-	M	-	-	-	COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains)
NMKPALMA_01637	1.48e-238	-	-	-	U	-	-	-	type IV secretory pathway VirB4
NMKPALMA_01638	6.01e-35	-	-	-	-	-	-	-	-
NMKPALMA_01640	1.79e-72	-	-	-	-	-	-	-	-
NMKPALMA_01641	1.68e-273	-	-	-	U	ko:K03205	ko03070,map03070	ko00000,ko00001,ko00002,ko02044	TraM recognition site of TraD and TraG
NMKPALMA_01646	1.34e-178	-	-	-	O	ko:K03696	ko01100,map01100	ko00000,ko03110	Belongs to the ClpA ClpB family
NMKPALMA_01649	4.89e-173	topA2	5.99.1.2	-	G	ko:K03169	-	ko00000,ko01000,ko03032	Topoisomerase IA
NMKPALMA_01650	4.03e-61	-	-	-	L	-	-	-	Protein of unknown function (DUF3991)
NMKPALMA_01651	8.76e-13	nrdH	-	-	O	ko:K06191	-	ko00000	Glutaredoxin
NMKPALMA_01654	2.1e-21	-	-	-	K	-	-	-	ORF6N domain
NMKPALMA_01655	1.5e-34	XK27_00515	-	-	D	-	-	-	Glucan-binding protein C
NMKPALMA_01656	3.21e-06	-	2.7.13.3, 2.7.7.7, 5.4.99.21	-	D	ko:K02343,ko:K03407,ko:K06182,ko:K08372,ko:K12065,ko:K16291	ko00230,ko00240,ko01100,ko02020,ko02030,ko03030,ko03430,ko03440,map00230,map00240,map01100,map02020,map02030,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko01001,ko01002,ko01011,ko02022,ko02035,ko02044,ko03009,ko03032,ko03400	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
NMKPALMA_01657	1.12e-06	-	2.7.13.3, 2.7.7.7, 5.4.99.21	-	D	ko:K02343,ko:K03407,ko:K06182,ko:K08372,ko:K12065,ko:K16291	ko00230,ko00240,ko01100,ko02020,ko02030,ko03030,ko03430,ko03440,map00230,map00240,map01100,map02020,map02030,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko01001,ko01002,ko01011,ko02022,ko02035,ko02044,ko03009,ko03032,ko03400	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
NMKPALMA_01658	8.89e-116	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
NMKPALMA_01659	5.92e-41	-	-	-	V	-	-	-	Type I restriction modification DNA specificity domain
NMKPALMA_01660	4.08e-44	-	-	-	V	-	-	-	site-specific DNA-methyltransferase (adenine-specific) activity
NMKPALMA_01661	0.0	-	-	-	L	-	-	-	PFAM transposase, IS4 family protein
NMKPALMA_01662	1.46e-314	-	-	-	L	ko:K07484	-	ko00000	Transposase IS66 family
NMKPALMA_01663	3.44e-12	-	-	-	L	ko:K07484	-	ko00000	Transposase IS66 family
NMKPALMA_01664	2.8e-81	XK27_01125	-	-	L	ko:K07484	-	ko00000	PFAM IS66 Orf2 family protein
NMKPALMA_01667	1.62e-142	-	-	-	I	-	-	-	Acid phosphatase homologues
NMKPALMA_01668	0.0	agl	3.2.1.20	GH31	G	ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 31 family
NMKPALMA_01669	6.05e-291	-	-	-	P	-	-	-	Chloride transporter, ClC family
NMKPALMA_01670	7.77e-151	thiE	2.5.1.3	-	H	ko:K00788	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)
NMKPALMA_01671	1.31e-188	thiD	2.7.1.49, 2.7.4.7	-	H	ko:K00941	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Phosphomethylpyrimidine kinase
NMKPALMA_01672	2.08e-175	thiM	2.7.1.50	-	H	ko:K00878	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
NMKPALMA_01673	2.05e-66	-	-	-	-	-	-	-	-
NMKPALMA_01674	0.0	-	-	-	S	-	-	-	SEC-C Motif Domain Protein
NMKPALMA_01675	1.82e-94	-	-	-	-	-	-	-	-
NMKPALMA_01676	2.27e-220	-	-	-	-	-	-	-	-
NMKPALMA_01677	4.74e-223	fecB	-	-	P	ko:K02016	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Periplasmic binding protein
NMKPALMA_01678	1.73e-173	fecE	3.6.3.34	-	HP	ko:K02013	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	AAA domain, putative AbiEii toxin, Type IV TA system
NMKPALMA_01679	1.25e-165	fecD	-	-	P	ko:K02015	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
NMKPALMA_01680	4.92e-99	-	-	-	S	-	-	-	Flavodoxin
NMKPALMA_01681	3.65e-81	moaE	2.8.1.12	-	H	ko:K03635,ko:K21142	ko00790,ko01100,ko04122,map00790,map01100,map04122	ko00000,ko00001,ko01000	MoaE protein
NMKPALMA_01682	8.85e-43	moaD	-	-	H	ko:K03636	ko04122,map04122	ko00000,ko00001	ThiS family
NMKPALMA_01683	1.01e-273	narK	-	-	P	ko:K02575	ko00910,map00910	ko00000,ko00001,ko00002,ko02000	Transporter, major facilitator family protein
NMKPALMA_01684	2.57e-183	-	-	-	H	-	-	-	geranyltranstransferase activity
NMKPALMA_01685	8.94e-224	-	-	-	-	-	-	-	-
NMKPALMA_01686	1.26e-25	-	-	-	-	-	-	-	-
NMKPALMA_01687	1.5e-149	nreC	-	-	K	ko:K07696	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	PFAM regulatory protein LuxR
NMKPALMA_01688	3.61e-208	ispE	2.7.1.148	-	F	ko:K00919,ko:K16924	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko02000	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
NMKPALMA_01689	2.74e-50	veg	-	-	S	-	-	-	Biofilm formation stimulator VEG
NMKPALMA_01690	6.45e-209	ksgA	2.1.1.182	-	J	ko:K02528	-	ko00000,ko01000,ko03009	Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
NMKPALMA_01691	3.49e-127	rnmV	3.1.26.8	-	J	ko:K05985	-	ko00000,ko01000	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
NMKPALMA_01692	3.19e-201	tatD	-	-	L	ko:K03424	-	ko00000,ko01000	hydrolase, TatD family
NMKPALMA_01693	0.0	metG	6.1.1.10	-	J	ko:K01874	ko00450,ko00970,map00450,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
NMKPALMA_01694	1.59e-206	yunF	-	-	F	-	-	-	Protein of unknown function DUF72
NMKPALMA_01696	2.93e-168	cobB	-	-	K	ko:K12410	-	ko00000,ko01000	SIR2 family
NMKPALMA_01697	3.82e-228	-	-	-	-	-	-	-	-
NMKPALMA_01698	5.57e-288	mvaA	1.1.1.88, 2.3.1.9	-	C	ko:K00054,ko:K00626	ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the HMG-CoA reductase family
NMKPALMA_01699	1.53e-215	ppx	3.6.1.11, 3.6.1.40	-	FP	ko:K01524	ko00230,map00230	ko00000,ko00001,ko01000	exopolyphosphatase
NMKPALMA_01700	1.52e-240	trpS	6.1.1.2	-	J	ko:K01867	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-I aminoacyl-tRNA synthetase family
NMKPALMA_01701	3.56e-233	-	2.1.1.72	-	L	ko:K00571	-	ko00000,ko01000,ko02048	Belongs to the N(4) N(6)-methyltransferase family
NMKPALMA_01702	4.08e-106	ndk	2.7.4.6	-	F	ko:K00940	ko00230,ko00240,ko00983,ko01100,ko01110,ko01130,ko04016,map00230,map00240,map00983,map01100,map01110,map01130,map04016	ko00000,ko00001,ko00002,ko01000,ko04131	Belongs to the NDK family
NMKPALMA_01703	0.0	-	-	-	L	-	-	-	DNA helicase
NMKPALMA_01704	3.16e-260	napA	-	-	P	-	-	-	Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
NMKPALMA_01706	0.0	gabT	2.6.1.19, 5.1.1.21	-	E	ko:K00823,ko:K20708	ko00250,ko00410,ko00640,ko00650,ko01100,ko01120,map00250,map00410,map00640,map00650,map01100,map01120	ko00000,ko00001,ko00002,ko01000,ko01007	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
NMKPALMA_01707	0.0	ctrA	-	-	E	ko:K03294	-	ko00000	amino acid
NMKPALMA_01708	4.89e-153	nth	4.2.99.18	-	L	ko:K10773	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
NMKPALMA_01709	1.78e-57	-	1.3.5.4	-	S	ko:K00244	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	ko00000,ko00001,ko00002,ko01000	FMN binding
NMKPALMA_01710	2.41e-280	blt	-	-	EGP	ko:K08153	-	ko00000,ko00002,ko02000	transporter
NMKPALMA_01711	8.52e-216	hdhL	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	Belongs to the LDH MDH superfamily
NMKPALMA_01712	6.16e-200	metQ	-	-	P	ko:K02073	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the nlpA lipoprotein family
NMKPALMA_01713	1.04e-245	metN	-	-	P	ko:K02071	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
NMKPALMA_01714	5.25e-140	metI	-	-	P	ko:K02072	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
NMKPALMA_01715	8e-275	-	3.5.1.18	-	E	ko:K01439	ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000	succinyl-diaminopimelate desuccinylase
NMKPALMA_01716	0.0	eriC	-	-	P	ko:K03281	-	ko00000	chloride
NMKPALMA_01717	8.67e-101	msrB	1.8.4.12	-	O	ko:K07305	-	ko00000,ko01000	peptide methionine sulfoxide reductase
NMKPALMA_01718	1.61e-137	-	-	-	P	ko:K05846	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter, permease protein
NMKPALMA_01719	1.5e-182	proV	-	-	E	ko:K05847	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter, ATP-binding protein
NMKPALMA_01720	4.74e-139	proWZ	-	-	P	ko:K05846	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
NMKPALMA_01721	2.41e-205	proWY	-	-	M	ko:K05845	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter, substrate-binding protein, QAT family
NMKPALMA_01722	1.58e-96	ywnA	-	-	K	-	-	-	Transcriptional regulator
NMKPALMA_01723	3.69e-197	-	-	-	GM	-	-	-	NAD(P)H-binding
NMKPALMA_01724	4.44e-11	-	-	-	-	-	-	-	-
NMKPALMA_01725	1.21e-267	-	5.4.2.7	-	G	ko:K01839	ko00030,ko00230,map00030,map00230	ko00000,ko00001,ko01000	Metalloenzyme superfamily
NMKPALMA_01726	0.0	cadA	-	-	P	-	-	-	P-type ATPase
NMKPALMA_01727	4.27e-167	XK27_08875	-	-	O	-	-	-	PFAM peptidase M10A and M12B, matrixin and adamalysin
NMKPALMA_01728	4.68e-160	-	-	-	-	-	-	-	-
NMKPALMA_01729	1.3e-69	-	-	-	S	-	-	-	Sugar efflux transporter for intercellular exchange
NMKPALMA_01730	1.05e-310	-	1.8.1.7	-	C	ko:K00383,ko:K21739	ko00480,ko04918,map00480,map04918	ko00000,ko00001,ko01000	Pyridine nucleotide-disulfide oxidoreductase
NMKPALMA_01732	0.0	-	-	-	L	-	-	-	Helicase C-terminal domain protein
NMKPALMA_01733	1.2e-105	-	3.6.1.27	-	I	ko:K19302	ko00550,map00550	ko00000,ko00001,ko01000,ko01011	PAP2 superfamily
NMKPALMA_01734	1.33e-227	ydhF	-	-	S	-	-	-	Aldo keto reductase
NMKPALMA_01736	5.03e-181	tpiA	5.3.1.1	-	G	ko:K01803	ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
NMKPALMA_01737	6.25e-83	psiE	-	-	S	ko:K13256	-	ko00000	Phosphate-starvation-inducible E
NMKPALMA_01738	1.34e-127	-	-	-	S	ko:K07002	-	ko00000	Serine hydrolase
NMKPALMA_01740	2.8e-232	yeaB	-	-	P	-	-	-	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
NMKPALMA_01741	0.0	nhaC	-	-	C	ko:K03315	-	ko00000,ko02000	Na H antiporter NhaC
NMKPALMA_01742	2.3e-52	-	-	-	S	-	-	-	Cytochrome b5-like Heme/Steroid binding domain
NMKPALMA_01743	5.44e-147	-	-	-	S	ko:K07118	-	ko00000	NAD(P)H-binding
NMKPALMA_01744	2.25e-49	-	-	-	-	-	-	-	-
NMKPALMA_01745	1.05e-168	-	-	-	IQ	-	-	-	dehydrogenase reductase
NMKPALMA_01746	4.57e-304	-	-	-	EGP	-	-	-	MFS transporter, metabolite H symporter (MHS) family protein
NMKPALMA_01747	4.41e-49	hxlR	-	-	K	-	-	-	regulation of RNA biosynthetic process
NMKPALMA_01748	1.11e-208	-	-	-	G	-	-	-	Belongs to the carbohydrate kinase PfkB family
NMKPALMA_01749	0.0	-	-	-	F	ko:K03457	-	ko00000	Belongs to the purine-cytosine permease (2.A.39) family
NMKPALMA_01750	3.88e-265	-	-	-	O	-	-	-	ADP-ribosylglycohydrolase
NMKPALMA_01751	3.97e-132	pncA	-	-	Q	-	-	-	Isochorismatase family
NMKPALMA_01752	0.0	nadC2	6.3.4.21	-	F	ko:K00763	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
NMKPALMA_01753	1.14e-168	-	-	-	F	-	-	-	NUDIX domain
NMKPALMA_01754	1.23e-202	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
NMKPALMA_01762	1.97e-47	-	-	-	L	-	-	-	Reverse transcriptase (RNA-dependent DNA polymerase)
NMKPALMA_01763	5.74e-304	tyrS	6.1.1.1	-	J	ko:K01866	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
NMKPALMA_01764	2.47e-230	-	-	-	-	-	-	-	-
NMKPALMA_01765	5.27e-169	gpmA	5.4.2.11	-	G	ko:K01834	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
NMKPALMA_01766	1e-310	purD	6.3.4.13	-	F	ko:K01945	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the GARS family
NMKPALMA_01767	0.0	purH	2.1.2.3, 3.5.4.10	-	F	ko:K00602	ko00230,ko00670,ko01100,ko01110,ko01130,ko01523,map00230,map00670,map01100,map01110,map01130,map01523	ko00000,ko00001,ko00002,ko01000,ko04147	Bifunctional purine biosynthesis protein PurH
NMKPALMA_01768	4.78e-135	purN	2.1.2.2	-	F	ko:K11175	ko00230,ko00670,ko01100,ko01110,ko01130,map00230,map00670,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
NMKPALMA_01769	6.01e-245	purM	6.3.3.1	-	F	ko:K01933	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Phosphoribosylformylglycinamidine cyclo-ligase
NMKPALMA_01770	0.0	purF	2.4.2.14	-	F	ko:K00764	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko01002	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
NMKPALMA_01771	0.0	purL	6.3.5.3	-	F	ko:K01952	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
NMKPALMA_01772	1.15e-162	purQ	6.3.5.3	-	F	ko:K01952	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
NMKPALMA_01773	7.76e-51	purS	6.3.5.3	-	F	ko:K01952	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
NMKPALMA_01774	5.23e-170	purC	6.3.2.6	-	F	ko:K01923	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the SAICAR synthetase family
NMKPALMA_01775	0.0	purB	4.3.2.2	-	F	ko:K01756	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
NMKPALMA_01776	2.48e-275	purK	6.3.4.18	-	F	ko:K01589	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
NMKPALMA_01777	7.36e-109	purE	5.4.99.18	-	F	ko:K01588	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
NMKPALMA_01778	1.97e-169	budA	4.1.1.5	-	H	ko:K01575	ko00650,ko00660,map00650,map00660	ko00000,ko00001,ko01000	Belongs to the alpha-acetolactate decarboxylase family
NMKPALMA_01779	0.0	alsS	2.2.1.6	-	EH	ko:K01652	ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the TPP enzyme family
NMKPALMA_01780	0.0	fhs	6.3.4.3	-	F	ko:K01938	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Belongs to the formate--tetrahydrofolate ligase family
NMKPALMA_01781	1.5e-220	ydbI	-	-	K	-	-	-	AI-2E family transporter
NMKPALMA_01782	1.54e-293	cfa	2.1.1.79	-	M	ko:K00574	-	ko00000,ko01000	cyclopropane-fatty-acyl-phospholipid synthase
NMKPALMA_01783	3.73e-122	ribB	3.5.4.25, 4.1.99.12	-	H	ko:K14652	ko00740,ko00790,ko01100,ko01110,map00740,map00790,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
NMKPALMA_01784	2.23e-149	-	-	-	S	-	-	-	Haloacid dehalogenase-like hydrolase
NMKPALMA_01785	7.47e-148	pyrE	2.4.2.10	-	F	ko:K00762	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
NMKPALMA_01786	1.96e-167	pyrF	4.1.1.23	-	F	ko:K01591	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
NMKPALMA_01787	1.13e-219	pyrD	1.3.1.14, 1.3.98.1	-	F	ko:K00226,ko:K17828	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
NMKPALMA_01788	1.44e-311	pyrC	3.5.2.3	-	F	ko:K01465	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
NMKPALMA_01789	1.81e-221	pyrB	2.1.3.2	-	F	ko:K00609	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the ATCase OTCase family
NMKPALMA_01790	2.91e-179	-	-	-	K	-	-	-	LysR substrate binding domain
NMKPALMA_01791	8.18e-70	-	-	-	S	-	-	-	branched-chain amino acid
NMKPALMA_01792	1.65e-193	-	-	-	E	-	-	-	AzlC protein
NMKPALMA_01793	1.12e-265	hpk31	-	-	T	-	-	-	Histidine kinase
NMKPALMA_01794	9.76e-161	vanR	-	-	K	-	-	-	response regulator
NMKPALMA_01795	1.47e-265	guaB	1.1.1.205	-	F	ko:K00088	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
NMKPALMA_01796	6.53e-220	deoR	-	-	K	ko:K05346	-	ko00000,ko03000	sugar-binding domain protein
NMKPALMA_01797	3.27e-167	deoD	2.4.2.1	-	F	ko:K03784	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	Purine nucleoside phosphorylase
NMKPALMA_01798	3.33e-302	pdp	2.4.2.2	-	F	ko:K00756	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	pyrimidine-nucleoside phosphorylase
NMKPALMA_01799	1.62e-298	deoB	5.4.2.7	-	G	ko:K01839	ko00030,ko00230,map00030,map00230	ko00000,ko00001,ko01000	Phosphotransfer between the C1 and C5 carbon atoms of pentose
NMKPALMA_01800	9.74e-154	deoC	4.1.2.4	-	F	ko:K01619	ko00030,map00030	ko00000,ko00001,ko01000	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
NMKPALMA_01801	5.18e-174	-	-	-	S	-	-	-	Protein of unknown function (DUF1129)
NMKPALMA_01802	6.1e-255	ychF	-	-	J	ko:K06942	-	ko00000,ko03009	ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
NMKPALMA_01803	4.78e-42	yyzM	-	-	S	-	-	-	Bacterial protein of unknown function (DUF951)
NMKPALMA_01804	4.83e-198	spo0J	-	-	K	ko:K03497	-	ko00000,ko03000,ko03036,ko04812	Belongs to the ParB family
NMKPALMA_01805	8.34e-180	soj	-	-	D	ko:K03496	-	ko00000,ko03036,ko04812	Sporulation initiation inhibitor
NMKPALMA_01806	5.06e-198	noc	-	-	K	ko:K03497	-	ko00000,ko03000,ko03036,ko04812	Belongs to the ParB family
NMKPALMA_01807	2.02e-159	rsmG	2.1.1.170	-	J	ko:K03501	-	ko00000,ko01000,ko03009,ko03036	Specifically methylates the N7 position of a guanine in 16S rRNA
NMKPALMA_01808	2.08e-208	-	1.1.1.157	-	I	ko:K00074	ko00360,ko00362,ko00650,ko01100,ko01120,map00360,map00362,map00650,map01100,map01120	ko00000,ko00001,ko01000	3-hydroxyacyl-CoA dehydrogenase
NMKPALMA_01809	1.67e-218	rihA	3.2.2.1	-	F	ko:K01239,ko:K01250,ko:K12700	ko00230,ko00760,ko01100,map00230,map00760,map01100	ko00000,ko00001,ko01000	Nucleoside
NMKPALMA_01810	1.69e-278	nupG	-	-	F	ko:K03317,ko:K11535,ko:K16323	-	ko00000,ko02000	Nucleoside transporter
NMKPALMA_01811	5.3e-287	aapA	-	-	E	ko:K03293,ko:K11737	-	ko00000,ko02000	Amino acid permease
NMKPALMA_01812	5.67e-178	glnQ	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
NMKPALMA_01813	0.0	glnP	-	-	P	ko:K02029,ko:K02030,ko:K10036	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
NMKPALMA_01816	0.0	pepD4	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
NMKPALMA_01817	0.0	yjbQ	-	-	P	ko:K03455,ko:K03499	-	ko00000,ko02000	TrkA C-terminal domain protein
NMKPALMA_01818	1.89e-35	dmpI	5.3.2.6	-	G	ko:K01821	ko00362,ko00621,ko00622,ko01100,ko01120,ko01220,map00362,map00621,map00622,map01100,map01120,map01220	ko00000,ko00001,ko00002,ko01000	Belongs to the 4-oxalocrotonate tautomerase family
NMKPALMA_01819	0.0	glpK	2.7.1.30	-	F	ko:K00864	ko00561,ko01100,ko03320,ko04626,map00561,map01100,map03320,map04626	ko00000,ko00001,ko01000,ko04147	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
NMKPALMA_01820	2.75e-116	-	-	-	-	-	-	-	-
NMKPALMA_01821	6.83e-50	-	-	-	-	-	-	-	-
NMKPALMA_01822	5.56e-130	-	-	-	K	-	-	-	DNA-templated transcription, initiation
NMKPALMA_01823	2.47e-164	-	-	-	-	-	-	-	-
NMKPALMA_01824	3.5e-84	-	-	-	K	-	-	-	Transcriptional regulator, HxlR family
NMKPALMA_01825	1.16e-220	brpA	-	-	K	-	-	-	Cell envelope-like function transcriptional attenuator common domain protein
NMKPALMA_01826	1.37e-191	epsB	-	-	M	-	-	-	biosynthesis protein
NMKPALMA_01827	1.76e-157	ywqD	-	-	D	-	-	-	Capsular exopolysaccharide family
NMKPALMA_01828	2.95e-133	rfbP	-	-	M	ko:K13012,ko:K19428	-	ko00000,ko01000,ko01005	Bacterial sugar transferase
NMKPALMA_01829	5.7e-95	-	-	-	M	-	-	-	Oligosaccharide biosynthesis protein Alg14 like
NMKPALMA_01830	4.33e-62	-	-	-	S	-	-	-	Glycosyltransferase family 28 C-terminal domain
NMKPALMA_01831	3.73e-174	-	-	-	S	-	-	-	Haloacid dehalogenase-like hydrolase
NMKPALMA_01832	2.96e-67	-	-	-	M	-	-	-	Glycosyltransferase, group 1 family protein
NMKPALMA_01833	2.69e-104	-	2.7.8.12	GT2	S	ko:K09809,ko:K19427	-	ko00000,ko01000	Glycosyltransferase like family 2
NMKPALMA_01835	1.81e-46	cysE_1	2.3.1.30	-	E	ko:K00640	ko00270,ko00920,ko01100,ko01110,ko01120,ko01200,ko01230,ko05111,map00270,map00920,map01100,map01110,map01120,map01200,map01230,map05111	ko00000,ko00001,ko00002,ko01000	serine acetyltransferase
NMKPALMA_01836	1.46e-85	-	-	-	M	-	-	-	Glycosyltransferase sugar-binding region containing DXD motif
NMKPALMA_01837	1.44e-131	-	-	-	S	-	-	-	Polysaccharide biosynthesis protein
NMKPALMA_01838	4.5e-261	rfbB	4.2.1.46	-	M	ko:K01710	ko00521,ko00523,ko00525,ko01055,ko01130,map00521,map00523,map00525,map01055,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
NMKPALMA_01839	1.9e-69	rfbD	1.1.1.133	-	M	ko:K00067	ko00521,ko00523,ko01130,map00521,map00523,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
NMKPALMA_01841	8.38e-72	-	-	-	D	-	-	-	nuclear chromosome segregation
NMKPALMA_01843	1.64e-34	-	-	-	-	-	-	-	-
NMKPALMA_01844	1.67e-56	-	-	-	T	ko:K07171	-	ko00000,ko01000,ko02048	PemK-like, MazF-like toxin of type II toxin-antitoxin system
NMKPALMA_01845	3.42e-06	-	-	-	QT	ko:K09684	-	ko00000,ko03000	Purine catabolism regulatory protein-like family
NMKPALMA_01846	1.71e-43	-	1.6.5.2	-	GM	ko:K19267	ko00130,ko01110,map00130,map01110	ko00000,ko00001,ko01000	NAD(P)H-binding
NMKPALMA_01847	4.67e-125	-	-	-	V	-	-	-	Abi-like protein
NMKPALMA_01848	6e-216	mmuM	2.1.1.10	-	H	ko:K00547	ko00270,ko01100,ko01110,map00270,map01100,map01110	ko00000,ko00001,ko01000	homocysteine S-methyltransferase
NMKPALMA_01849	0.0	ybgF	-	-	E	ko:K02205,ko:K03293,ko:K16235,ko:K16236	-	ko00000,ko02000	amino acid
NMKPALMA_01851	4.36e-90	-	-	-	T	ko:K07171	-	ko00000,ko01000,ko02048	Toxin-antitoxin system, toxin component, MazF family
NMKPALMA_01852	4.74e-51	-	-	-	-	ko:K18829	-	ko00000,ko02048	-
NMKPALMA_01854	0.0	snf	-	-	KL	-	-	-	domain protein
NMKPALMA_01855	1.44e-185	ywqE	3.1.3.48	-	GM	ko:K01104	-	ko00000,ko01000	PHP domain protein
NMKPALMA_01856	7.54e-226	-	-	-	M	-	-	-	Glycosyl hydrolases family 25
NMKPALMA_01857	1.77e-262	sbcD	-	-	L	ko:K03547	-	ko00000,ko03400	SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity
NMKPALMA_01858	0.0	sbcC	-	-	L	ko:K03546	-	ko00000,ko03400	Putative exonuclease SbcCD, C subunit
NMKPALMA_01859	9.74e-134	-	-	-	L	-	-	-	nuclease
NMKPALMA_01860	0.0	XK27_00340	3.1.3.5	-	F	ko:K01081	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the 5'-nucleotidase family
NMKPALMA_01861	3.69e-92	-	-	-	-	-	-	-	-
NMKPALMA_01862	1.23e-134	-	-	-	D	ko:K04095	-	ko00000,ko03036	Fic/DOC family
NMKPALMA_01863	2.28e-157	nagB	3.5.99.6	-	G	ko:K02564	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
NMKPALMA_01864	0.0	-	-	-	-	-	-	-	-
NMKPALMA_01865	3.61e-26	-	-	-	-	-	-	-	-
NMKPALMA_01866	0.0	-	-	-	-	-	-	-	-
NMKPALMA_01868	1.68e-28	sacB	2.4.1.10, 2.4.1.9	GH68	M	ko:K00692,ko:K20811	ko00500,ko01100,ko02020,map00500,map01100,map02020	ko00000,ko00001,ko01000,ko01003	Levansucrase/Invertase
NMKPALMA_01869	1.25e-204	rssA	-	-	S	-	-	-	Phospholipase, patatin family
NMKPALMA_01870	1.15e-152	-	-	-	L	-	-	-	Integrase
NMKPALMA_01871	6.02e-193	-	-	-	EG	-	-	-	EamA-like transporter family
NMKPALMA_01872	9.45e-168	narI	1.7.5.1	-	C	ko:K00374	ko00910,ko01120,ko02020,map00910,map01120,map02020	ko00000,ko00001,ko00002,ko01000	Nitrate reductase
NMKPALMA_01873	7.01e-129	narJ	-	-	C	ko:K00373	ko02020,map02020	ko00000,ko00001	nitrate reductase molybdenum cofactor assembly chaperone
NMKPALMA_01874	0.0	narH	1.7.5.1	-	C	ko:K00371	ko00910,ko01120,ko02020,map00910,map01120,map02020	ko00000,ko00001,ko00002,ko01000	4Fe-4S dicluster domain
NMKPALMA_01875	0.0	narZ	1.7.5.1	-	C	ko:K00370	ko00910,ko01120,ko02020,map00910,map01120,map02020	ko00000,ko00001,ko00002,ko01000	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
NMKPALMA_01876	3.18e-237	moeB	2.7.7.80	-	H	ko:K21029	ko04122,map04122	ko00000,ko00001,ko01000	ThiF family
NMKPALMA_01877	2.01e-108	moaB	2.7.7.75	-	H	ko:K03638	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko01000	May be involved in the biosynthesis of molybdopterin
NMKPALMA_01878	1.05e-87	moeA	2.10.1.1	-	H	ko:K03750	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko01000	MoeA N-terminal region (domain I and II)
NMKPALMA_01879	1.19e-133	moeA	2.10.1.1	-	H	ko:K03750	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko01000	MoeA N-terminal region (domain I and II)
NMKPALMA_01880	4.55e-97	mobB	-	-	H	ko:K03753	-	ko00000	molybdopterin-guanine dinucleotide biosynthesis protein
NMKPALMA_01881	3.21e-124	mobA	2.7.7.77	-	H	ko:K03752	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko01000	Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor
NMKPALMA_01882	1.29e-59	-	-	-	-	-	-	-	-
NMKPALMA_01883	5.06e-208	nreB	2.7.13.3	-	F	ko:K07683	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Sensor histidine kinase
NMKPALMA_01884	4.35e-154	-	-	-	M	-	-	-	Rib/alpha-like repeat
NMKPALMA_01886	2.68e-294	sacB	2.4.1.10, 2.4.1.9	GH68	M	ko:K00692,ko:K20811	ko00500,ko01100,ko02020,map00500,map01100,map02020	ko00000,ko00001,ko01000,ko01003	Levansucrase/Invertase
NMKPALMA_01887	4.86e-258	xerS	-	-	L	-	-	-	Belongs to the 'phage' integrase family
NMKPALMA_01889	5.91e-93	fabZ	4.2.1.59	-	I	ko:K02372	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
NMKPALMA_01890	2.35e-101	-	-	-	K	-	-	-	Transcriptional regulator, MarR family
NMKPALMA_01891	1.66e-220	fabH	2.3.1.180	-	I	ko:K00648	ko00061,ko01100,ko01212,map00061,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
NMKPALMA_01892	7.21e-47	acpP	-	-	IQ	ko:K02078	-	ko00000,ko00001	Carrier of the growing fatty acid chain in fatty acid biosynthesis
NMKPALMA_01893	1.96e-203	fabD	2.3.1.39	-	I	ko:K00645,ko:K15327,ko:K15329	ko00061,ko00333,ko01100,ko01130,ko01212,map00061,map00333,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004,ko01008	Malonyl CoA-acyl carrier protein transacylase
NMKPALMA_01894	1.94e-163	fabG	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	reductase
NMKPALMA_01895	2.73e-283	fabF	2.3.1.179	-	I	ko:K09458	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
NMKPALMA_01896	8.12e-94	accB	-	-	I	ko:K02160	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002	first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
NMKPALMA_01897	7.97e-98	fabZ	4.2.1.59	-	I	ko:K02372	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
NMKPALMA_01898	0.0	accC	6.3.4.14, 6.4.1.2	-	I	ko:K01961	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002,ko01000	Acetyl-CoA carboxylase biotin carboxylase subunit
NMKPALMA_01899	2.31e-181	accD	2.1.3.15, 6.4.1.2	-	I	ko:K01963	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002,ko01000	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
NMKPALMA_01900	9.33e-178	accA	2.1.3.15, 6.4.1.2	-	I	ko:K01962	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002,ko01000	alpha subunit
NMKPALMA_01901	1.86e-166	fabI	1.3.1.10, 1.3.1.9	-	I	ko:K00208	ko00061,ko00333,ko00780,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Enoyl- acyl-carrier-protein reductase NADH
NMKPALMA_01912	3.67e-62	-	-	-	S	-	-	-	Plasmid replication protein
NMKPALMA_01914	9.01e-15	-	-	-	D	-	-	-	COG1674 DNA segregation ATPase FtsK SpoIIIE and related proteins
NMKPALMA_01917	3.39e-131	cadD	-	-	P	-	-	-	Cadmium resistance transporter
NMKPALMA_01918	1.51e-75	cadX	-	-	K	ko:K21903	-	ko00000,ko03000	Bacterial regulatory protein, arsR family
NMKPALMA_01919	7.61e-93	arsC	1.20.4.1	-	T	ko:K03741	-	ko00000,ko01000	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
NMKPALMA_01920	2.07e-231	arsB	-	-	P	ko:K03325	-	ko00000,ko02000	Sodium Bile acid symporter family
NMKPALMA_01921	6.77e-48	arsR	-	-	K	ko:K03892	-	ko00000,ko03000	helix_turn_helix, Arsenical Resistance Operon Repressor
NMKPALMA_01923	0.0	-	-	-	S	-	-	-	ABC transporter, ATP-binding protein
NMKPALMA_01924	4.33e-188	-	-	-	S	-	-	-	Putative ABC-transporter type IV
NMKPALMA_01925	4.21e-137	-	-	-	NU	-	-	-	mannosyl-glycoprotein
NMKPALMA_01926	7.21e-316	brnQ	-	-	U	ko:K03311	-	ko00000	Component of the transport system for branched-chain amino acids
NMKPALMA_01927	3.82e-295	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2325)
NMKPALMA_01928	3.19e-263	yngD	-	-	S	ko:K07097	-	ko00000	DHHA1 domain
NMKPALMA_01929	3.53e-66	-	-	-	-	-	-	-	-
NMKPALMA_01930	7.68e-179	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
NMKPALMA_01932	1.11e-70	-	-	-	-	-	-	-	-
NMKPALMA_01933	3.52e-153	yrkL	-	-	S	-	-	-	Flavodoxin-like fold
NMKPALMA_01935	2.63e-84	yeaO	-	-	S	-	-	-	Protein of unknown function, DUF488
NMKPALMA_01936	2.73e-153	yxlJ	3.2.2.21	-	L	ko:K03652	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Belongs to the DNA glycosylase MPG family
NMKPALMA_01937	7.87e-266	-	-	-	S	-	-	-	associated with various cellular activities
NMKPALMA_01938	1.24e-296	-	-	-	S	-	-	-	Putative metallopeptidase domain
NMKPALMA_01939	2.98e-64	-	-	-	-	-	-	-	-
NMKPALMA_01940	0.0	pepO	-	-	O	ko:K07386	-	ko00000,ko01000,ko01002	Peptidase family M13
NMKPALMA_01941	2.59e-143	-	-	-	K	-	-	-	Helix-turn-helix domain
NMKPALMA_01942	7.88e-116	ymdB	-	-	S	-	-	-	Macro domain protein
NMKPALMA_01943	1.41e-250	-	-	-	EGP	-	-	-	Major Facilitator
NMKPALMA_01944	0.0	cls	-	-	I	ko:K06131	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
NMKPALMA_01945	1.39e-69	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
NMKPALMA_01946	3.74e-213	cysK	2.5.1.47	-	E	ko:K01738	ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the cysteine synthase cystathionine beta- synthase family
NMKPALMA_01947	9.5e-200	metA	2.3.1.46	-	E	ko:K00651	ko00270,ko00920,ko01100,ko01110,ko01230,map00270,map00920,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Transfers an acetyl group from acetyl-CoA to
NMKPALMA_01948	0.0	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	FtsX-like permease family
NMKPALMA_01949	1.01e-173	XK27_05695	-	-	V	ko:K02003,ko:K19083	ko02010,ko02020,map02010,map02020	ko00000,ko00001,ko00002,ko02000	ABC transporter, ATP-binding protein
NMKPALMA_01950	7.47e-234	kinG	-	-	T	-	-	-	Histidine kinase-like ATPases
NMKPALMA_01951	4.33e-161	XK27_10500	-	-	K	-	-	-	response regulator
NMKPALMA_01952	4.68e-198	yvgN	-	-	S	-	-	-	Aldo keto reductase
NMKPALMA_01953	5.64e-175	pnuC	-	-	H	ko:K03811	-	ko00000,ko02000	nicotinamide mononucleotide transporter
NMKPALMA_01954	1.93e-106	greA	-	-	K	ko:K03624	-	ko00000,ko03021	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
NMKPALMA_01955	5.27e-260	-	-	-	-	-	-	-	-
NMKPALMA_01956	1.76e-68	-	-	-	-	-	-	-	-
NMKPALMA_01957	1.21e-48	-	-	-	-	-	-	-	-
NMKPALMA_01958	8.85e-118	-	-	-	S	ko:K06910	-	ko00000	Phosphatidylethanolamine-binding protein
NMKPALMA_01959	1.98e-189	-	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Tyrosine phosphatase family
NMKPALMA_01960	2.91e-229	celE3	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase family
NMKPALMA_01961	5.13e-288	galK	2.7.1.6	-	F	ko:K00849	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
NMKPALMA_01962	0.0	galT	2.7.7.12	-	G	ko:K00965	ko00052,ko00520,ko01100,ko04917,map00052,map00520,map01100,map04917	ko00000,ko00001,ko00002,ko01000	UDP-glucose--hexose-1-phosphate uridylyltransferase
NMKPALMA_01963	2.92e-233	galR	-	-	K	ko:K02529	-	ko00000,ko03000	Transcriptional regulator
NMKPALMA_01964	1.11e-135	apl	3.1.3.1	-	S	ko:K01077	ko00730,ko00790,ko01100,ko02020,map00730,map00790,map01100,map02020	ko00000,ko00001,ko00002,ko00537,ko01000,ko04147	SNARE associated Golgi protein
NMKPALMA_01965	5.61e-292	gltT	-	-	U	ko:K03309,ko:K11102	-	ko00000,ko02000	Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
NMKPALMA_01966	6.62e-105	-	-	-	K	ko:K03719	-	ko00000,ko03000,ko03036	AsnC family
NMKPALMA_01967	2.32e-104	usp5	-	-	T	-	-	-	universal stress protein
NMKPALMA_01968	0.0	lacS	-	-	G	ko:K11104,ko:K16209	-	ko00000,ko02000	Transporter
NMKPALMA_01969	1.76e-52	-	-	-	-	-	-	-	-
NMKPALMA_01970	0.0	gnd	1.1.1.343, 1.1.1.44	-	H	ko:K00033	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
NMKPALMA_01971	0.0	zwf	1.1.1.363, 1.1.1.49	-	G	ko:K00036	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,ko05230,map00030,map00480,map01100,map01110,map01120,map01130,map01200,map05230	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
NMKPALMA_01972	3.75e-246	yycB	-	-	P	ko:K03449	-	ko00000,ko02000	Transporter, major facilitator family protein
NMKPALMA_01973	3.68e-97	-	-	-	S	ko:K04750	-	ko00000	3-demethylubiquinone-9 3-methyltransferase
NMKPALMA_01974	1.98e-110	nrdI	-	-	F	ko:K03647	-	ko00000	Belongs to the NrdI family
NMKPALMA_01975	4.1e-308	yhdP	-	-	S	-	-	-	Transporter associated domain
NMKPALMA_01976	2.06e-200	-	-	-	V	-	-	-	(ABC) transporter
NMKPALMA_01977	4.67e-116	-	-	-	GM	-	-	-	epimerase
NMKPALMA_01978	3.04e-117	-	-	-	K	-	-	-	Domain of unknown function (DUF1836)
NMKPALMA_01979	8.16e-103	yybA	-	-	K	-	-	-	Transcriptional regulator
NMKPALMA_01980	7.74e-173	XK27_07210	-	-	S	-	-	-	B3 4 domain
NMKPALMA_01981	7.97e-238	XK27_12525	-	-	S	-	-	-	AI-2E family transporter
NMKPALMA_01982	2.93e-197	-	-	-	G	-	-	-	Xylose isomerase domain protein TIM barrel
NMKPALMA_01983	2.37e-198	-	-	-	-	-	-	-	-
NMKPALMA_01984	5.92e-174	glpF	-	-	U	ko:K02440	-	ko00000,ko02000	Belongs to the MIP aquaporin (TC 1.A.8) family
NMKPALMA_01985	9.54e-241	ldhA	1.1.1.28	-	C	ko:K03778,ko:K18347	ko00620,ko01120,ko01502,ko02020,map00620,map01120,map01502,map02020	ko00000,ko00001,ko00002,ko01000,ko01504	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
NMKPALMA_01986	0.0	ycfI	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter, ATP-binding protein
NMKPALMA_01987	0.0	yfiC	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter
NMKPALMA_01988	0.0	pepD2	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
NMKPALMA_01989	1.65e-113	ebsC	-	-	J	ko:K03976	-	ko00000,ko01000,ko03016	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
NMKPALMA_01990	1.82e-172	gntR	-	-	K	-	-	-	UbiC transcription regulator-associated domain protein
NMKPALMA_01991	0.0	xfp	4.1.2.22, 4.1.2.9	-	G	ko:K01621	ko00030,ko00710,ko01100,ko01120,map00030,map00710,map01100,map01120	ko00000,ko00001,ko01000	Phosphoketolase
NMKPALMA_01992	5.83e-308	-	-	-	E	-	-	-	amino acid
NMKPALMA_01993	1.76e-177	yfhR3	-	-	S	ko:K06889	-	ko00000	Serine hydrolase (FSH1)
NMKPALMA_01994	3.4e-311	brnQ	-	-	U	ko:K03311	-	ko00000	Component of the transport system for branched-chain amino acids
NMKPALMA_01995	3.09e-213	-	-	-	GK	-	-	-	ROK family
NMKPALMA_01996	0.0	fusA1	-	-	J	-	-	-	elongation factor G
NMKPALMA_01997	1.06e-105	uspA3	-	-	T	-	-	-	universal stress protein
NMKPALMA_01998	4.97e-249	lplA	6.3.1.20	-	H	ko:K03800	ko00785,ko01100,map00785,map01100	ko00000,ko00001,ko01000	Lipoate-protein ligase
NMKPALMA_01999	1.78e-83	-	-	-	-	-	-	-	-
NMKPALMA_02000	3.18e-11	-	-	-	-	-	-	-	-
NMKPALMA_02001	1.16e-151	-	-	-	-	ko:K01992	-	ko00000,ko00002,ko02000	-
NMKPALMA_02002	7.55e-174	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter
NMKPALMA_02003	1.37e-270	-	-	-	EGP	-	-	-	Major Facilitator
NMKPALMA_02004	0.0	-	-	-	G	ko:K02775	ko00052,ko01100,ko02060,map00052,map01100,map02060	ko00000,ko00001,ko00002,ko02000	PTS system Galactitol-specific IIC component
NMKPALMA_02005	1.55e-227	-	-	-	C	-	-	-	Zinc-binding dehydrogenase
NMKPALMA_02006	5.74e-206	-	-	-	-	-	-	-	-
NMKPALMA_02007	1.3e-95	-	-	-	K	-	-	-	Transcriptional regulator
NMKPALMA_02008	1.46e-240	ybcH	-	-	D	ko:K06889	-	ko00000	Alpha beta
NMKPALMA_02009	9.02e-69	-	-	-	S	ko:K08987	-	ko00000	Protein of unknown function (DUF1304)
NMKPALMA_02010	0.0	nhaK	-	-	P	ko:K03316	-	ko00000	Sodium proton antiporter
NMKPALMA_02011	6.5e-71	-	-	-	-	-	-	-	-
NMKPALMA_02012	2.91e-147	-	-	-	P	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Cobalt transport protein
NMKPALMA_02013	0.0	-	-	-	S	ko:K16786,ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
NMKPALMA_02014	1.99e-121	ykoE	-	-	S	ko:K16925	-	ko00000,ko00002,ko02000	ABC-type cobalt transport system, permease component
NMKPALMA_02015	5.13e-172	-	-	-	S	ko:K07090	-	ko00000	membrane transporter protein
NMKPALMA_02016	1.1e-177	-	-	-	IQ	-	-	-	KR domain
NMKPALMA_02017	6.38e-232	iunH1	3.2.2.1	-	F	ko:K01239	ko00230,ko00760,ko01100,map00230,map00760,map01100	ko00000,ko00001,ko01000	nucleoside hydrolase
NMKPALMA_02018	5.66e-232	yumC	1.18.1.2, 1.19.1.1	-	C	ko:K21567	-	ko00000,ko01000	Ferredoxin--NADP reductase
NMKPALMA_02019	2.79e-157	-	-	-	K	ko:K07707	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko02022	LytTr DNA-binding domain
NMKPALMA_02020	5.41e-17	-	-	-	S	-	-	-	Domain of unknown function (DUF4767)
NMKPALMA_02021	3.17e-80	-	-	-	-	-	-	-	-
NMKPALMA_02023	1.39e-27	-	-	-	S	-	-	-	Domain of unknown function (DUF4767)
NMKPALMA_02024	2.57e-163	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
NMKPALMA_02026	4.31e-199	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
NMKPALMA_02027	5.02e-147	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
NMKPALMA_02028	9.07e-150	-	-	-	S	-	-	-	HAD hydrolase, family IA, variant
NMKPALMA_02029	0.0	yagE	-	-	E	-	-	-	amino acid
NMKPALMA_02030	2.93e-112	dps	-	-	P	ko:K04047	-	ko00000,ko03036	Belongs to the Dps family
NMKPALMA_02031	0.0	atp2C1	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	P-type ATPase
NMKPALMA_02032	1.5e-226	pepR	3.4.11.5	-	E	ko:K01259	ko00330,map00330	ko00000,ko00001,ko01000,ko01002	Releases the N-terminal proline from various substrates
NMKPALMA_02033	0.0	pepX	3.4.14.11	-	E	ko:K01281	-	ko00000,ko01000,ko01002	Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
NMKPALMA_02034	1.25e-262	potA	3.6.3.30, 3.6.3.31	-	P	ko:K02010,ko:K11072	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
NMKPALMA_02035	2.49e-187	potB	-	-	P	ko:K11071	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
NMKPALMA_02036	3.12e-183	potC	-	-	P	ko:K11070	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
NMKPALMA_02037	1.03e-267	potD	-	-	P	ko:K11069	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
NMKPALMA_02038	4.14e-295	-	-	-	-	-	-	-	-
NMKPALMA_02039	1.45e-297	-	-	-	EGP	ko:K08368	-	ko00000,ko02000	Sugar (and other) transporter
NMKPALMA_02040	0.0	yhdG	-	-	E	ko:K03294	-	ko00000	Amino Acid
NMKPALMA_02041	1.78e-97	-	-	-	F	-	-	-	Nudix hydrolase
NMKPALMA_02042	7.33e-135	gmk2	2.7.4.8	-	F	ko:K00942	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko00002,ko01000	Guanylate kinase
NMKPALMA_02043	1.27e-108	zur	-	-	P	ko:K02076,ko:K03711	-	ko00000,ko03000	Belongs to the Fur family
NMKPALMA_02044	1.35e-30	-	3.2.1.14	GH18	-	ko:K01183	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	-
NMKPALMA_02045	1.62e-193	-	-	-	-	-	-	-	-
NMKPALMA_02046	6.09e-53	pspC	-	-	KT	ko:K03973	-	ko00000,ko02048,ko03000	PspC domain protein
NMKPALMA_02047	2.14e-123	-	-	-	K	-	-	-	Transcriptional regulator (TetR family)
NMKPALMA_02048	0.0	yhgE	-	-	V	ko:K01421	-	ko00000	domain protein
NMKPALMA_02049	2.8e-231	-	1.1.1.28	-	CH	ko:K03778	ko00620,ko01120,map00620,map01120	ko00000,ko00001,ko01000	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
NMKPALMA_02050	6.47e-10	-	-	-	S	-	-	-	CsbD-like
NMKPALMA_02051	1.98e-42	-	-	-	S	-	-	-	Transglycosylase associated protein
NMKPALMA_02052	2.63e-14	-	-	-	-	-	-	-	-
NMKPALMA_02053	3e-290	hflX	-	-	S	ko:K03665	-	ko00000,ko03009	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
NMKPALMA_02054	1.64e-162	pgm3	-	-	G	-	-	-	phosphoglycerate mutase
NMKPALMA_02055	1.34e-147	-	-	-	S	ko:K03975	-	ko00000	SNARE associated Golgi protein
NMKPALMA_02056	0.0	helD	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	DNA helicase
NMKPALMA_02057	8.25e-306	nox	1.6.3.4	-	C	ko:K17869	-	ko00000,ko01000	NADH oxidase
NMKPALMA_02058	0.0	nox	1.6.3.4	-	C	ko:K17869	-	ko00000,ko01000	NADH oxidase
NMKPALMA_02059	2.73e-206	-	-	-	EG	-	-	-	EamA-like transporter family
NMKPALMA_02060	0.0	ltaS	2.7.8.20	-	M	ko:K19005	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
NMKPALMA_02061	8.32e-226	coaA	2.7.1.33	-	F	ko:K00867	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Pantothenic acid kinase
NMKPALMA_02062	4.35e-282	-	-	-	S	ko:K07133	-	ko00000	cog cog1373
NMKPALMA_02064	0.0	guaA	6.3.5.2	-	F	ko:K01951	ko00230,ko00983,ko01100,map00230,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko01002	Catalyzes the synthesis of GMP from XMP
NMKPALMA_02065	2.98e-288	oxlT	-	-	P	ko:K08177	-	ko00000,ko02000	Major Facilitator Superfamily
NMKPALMA_02066	2.6e-200	-	-	-	J	-	-	-	Methyltransferase
NMKPALMA_02067	4.93e-129	ywlG	-	-	S	-	-	-	Belongs to the UPF0340 family
NMKPALMA_02068	1.11e-247	-	-	-	EGP	-	-	-	Major Facilitator
NMKPALMA_02069	1.6e-169	-	-	-	M	-	-	-	Lysin motif
NMKPALMA_02070	1.34e-103	-	-	-	-	-	-	-	-
NMKPALMA_02071	3.1e-217	-	-	-	P	ko:K03284	-	ko00000,ko02000	CorA-like Mg2+ transporter protein
NMKPALMA_02072	6.95e-122	-	-	-	K	-	-	-	PFAM GCN5-related N-acetyltransferase
NMKPALMA_02073	1.71e-264	thiP	-	-	U	-	-	-	Belongs to the purine-cytosine permease (2.A.39) family
NMKPALMA_02074	3.7e-19	-	-	-	-	-	-	-	-
NMKPALMA_02075	1.31e-111	-	-	-	S	-	-	-	Domain of unknown function (DUF4767)
NMKPALMA_02076	1.27e-249	-	1.1.1.1	-	E	ko:K00001	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	alcohol dehydrogenase
NMKPALMA_02077	2.26e-149	-	-	-	S	-	-	-	Membrane
NMKPALMA_02078	3.84e-162	-	-	-	O	-	-	-	Zinc-dependent metalloprotease
NMKPALMA_02079	3.82e-114	luxS	4.4.1.21	-	H	ko:K07173	ko00270,ko01100,ko01230,ko02024,ko02026,ko05111,map00270,map01100,map01230,map02024,map02026,map05111	ko00000,ko00001,ko00002,ko01000	Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
NMKPALMA_02080	1.19e-199	metQ1	-	-	P	ko:K02073	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the nlpA lipoprotein family
NMKPALMA_02081	1.06e-71	-	-	-	-	-	-	-	-
NMKPALMA_02082	5.88e-146	frnE	5.3.4.1	-	Q	ko:K01829	-	ko00000,ko01000	DSBA-like thioredoxin domain
NMKPALMA_02083	2.51e-209	-	-	-	I	-	-	-	alpha/beta hydrolase fold
NMKPALMA_02084	2.6e-27	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
NMKPALMA_02085	6.59e-38	-	-	-	S	-	-	-	Phage derived protein Gp49-like (DUF891)
NMKPALMA_02086	1.38e-59	-	-	-	-	-	-	-	-
NMKPALMA_02087	9.73e-132	-	-	-	L	-	-	-	Integrase
NMKPALMA_02088	6.56e-81	-	-	-	S	-	-	-	Phage derived protein Gp49-like (DUF891)
NMKPALMA_02089	4.41e-52	-	-	-	K	-	-	-	Helix-turn-helix domain
NMKPALMA_02092	2.52e-120	-	-	-	S	-	-	-	N-acetylmuramoyl-L-alanine amidase activity
NMKPALMA_02093	5.83e-100	-	-	-	S	-	-	-	Bacteriophage holin family
NMKPALMA_02095	0.0	-	-	-	M	-	-	-	CotH kinase protein
NMKPALMA_02096	1.64e-05	-	-	-	-	-	-	-	-
NMKPALMA_02097	0.0	-	-	-	M	-	-	-	Prophage endopeptidase tail
NMKPALMA_02098	2.61e-189	-	-	-	S	-	-	-	phage tail
NMKPALMA_02099	0.0	-	-	-	D	-	-	-	Phage tail tape measure protein
NMKPALMA_02100	7.8e-81	-	-	-	-	-	-	-	-
NMKPALMA_02101	6.82e-72	-	-	-	S	-	-	-	Phage tail assembly chaperone protein, TAC
NMKPALMA_02102	1.36e-132	-	-	-	S	-	-	-	Phage tail tube protein
NMKPALMA_02103	4.5e-28	-	-	-	S	-	-	-	Protein of unknown function (DUF3168)
NMKPALMA_02104	5.09e-89	-	-	-	S	-	-	-	Bacteriophage HK97-gp10, putative tail-component
NMKPALMA_02105	1.87e-59	-	-	-	-	-	-	-	-
NMKPALMA_02106	1.8e-81	-	-	-	S	-	-	-	Phage gp6-like head-tail connector protein
NMKPALMA_02107	1.19e-197	-	-	-	-	-	-	-	-
NMKPALMA_02108	1.05e-129	-	-	-	S	-	-	-	Domain of unknown function (DUF4355)
NMKPALMA_02110	1.26e-218	-	-	-	S	-	-	-	Phage Mu protein F like protein
NMKPALMA_02111	0.0	-	-	-	S	-	-	-	Phage portal protein
NMKPALMA_02112	2.21e-313	yqaT	-	-	S	ko:K06909	-	ko00000	Phage terminase, large subunit
NMKPALMA_02113	2.09e-84	-	-	-	L	ko:K07474	-	ko00000	Terminase small subunit
NMKPALMA_02115	5.95e-106	-	-	-	S	-	-	-	Phage transcriptional regulator, ArpU family
NMKPALMA_02120	1.03e-19	-	-	-	-	-	-	-	-
NMKPALMA_02123	2.45e-79	-	-	-	S	-	-	-	VRR_NUC
NMKPALMA_02126	5.22e-291	-	-	-	S	ko:K06919	-	ko00000	Virulence-associated protein E
NMKPALMA_02127	1.39e-186	-	-	-	S	-	-	-	Bifunctional DNA primase/polymerase, N-terminal
NMKPALMA_02128	2.84e-120	-	-	-	-	-	-	-	-
NMKPALMA_02129	1.23e-180	-	-	-	L	-	-	-	AAA domain
NMKPALMA_02130	0.0	-	-	-	L	-	-	-	Helicase C-terminal domain protein
NMKPALMA_02131	1.96e-103	-	-	-	S	-	-	-	Siphovirus Gp157
NMKPALMA_02134	5.18e-38	-	-	-	-	-	-	-	-
NMKPALMA_02137	3.02e-51	-	-	-	-	-	-	-	-
NMKPALMA_02138	5.85e-09	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
NMKPALMA_02139	4.77e-20	-	-	-	K	-	-	-	Helix-turn-helix
NMKPALMA_02140	6.43e-22	-	-	-	E	-	-	-	Zn peptidase
NMKPALMA_02141	8.75e-39	-	-	-	S	-	-	-	Bacterial PH domain
NMKPALMA_02143	4.29e-127	-	-	-	V	-	-	-	Abi-like protein
NMKPALMA_02144	7.59e-205	int2	-	-	L	-	-	-	Belongs to the 'phage' integrase family
NMKPALMA_02152	1.34e-137	plsY	2.3.1.15	-	I	ko:K08591	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
NMKPALMA_02153	0.0	parE	-	-	L	ko:K02622	-	ko00000,ko01000,ko02048,ko03032,ko03036	Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
NMKPALMA_02154	0.0	parC	-	-	L	ko:K02621	-	ko00000,ko01000,ko02048,ko03032,ko03036	Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
NMKPALMA_02155	2.14e-105	-	-	-	F	-	-	-	NUDIX domain
NMKPALMA_02156	1.05e-221	ppaC	3.6.1.1	-	C	ko:K15986	ko00190,map00190	ko00000,ko00001,ko01000	inorganic pyrophosphatase
NMKPALMA_02157	1.5e-88	-	-	-	S	-	-	-	Belongs to the HesB IscA family
NMKPALMA_02158	3.19e-66	-	-	-	-	-	-	-	-
NMKPALMA_02160	1.08e-116	ywnH	2.3.1.183	-	M	ko:K03823	ko00440,ko01130,map00440,map01130	ko00000,ko00001,ko01000	Acetyltransferase (GNAT) domain
NMKPALMA_02161	8.79e-75	asp1	-	-	S	-	-	-	Asp23 family, cell envelope-related function
NMKPALMA_02162	3.09e-35	-	-	-	-	-	-	-	-
NMKPALMA_02163	3.97e-125	-	-	-	-	-	-	-	-
NMKPALMA_02164	0.0	gntK	2.7.1.12	-	G	ko:K00851	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko01000	Belongs to the FGGY kinase family
NMKPALMA_02165	2.81e-233	-	-	-	K	ko:K02525	-	ko00000,ko03000	Transcriptional regulator, LacI family
NMKPALMA_02166	1.14e-296	gntP	-	-	EG	ko:K03299	-	ko00000,ko02000	Gluconate
NMKPALMA_02167	0.0	gntK	2.7.1.12	-	G	ko:K00851	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko01000	Belongs to the FGGY kinase family
NMKPALMA_02168	8.39e-125	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
NMKPALMA_02169	3.8e-63	-	-	-	-	-	-	-	-
NMKPALMA_02170	0.0	nylA	3.5.1.4	-	J	ko:K01426	ko00330,ko00360,ko00380,ko00627,ko00643,ko01120,map00330,map00360,map00380,map00627,map00643,map01120	ko00000,ko00001,ko01000	Belongs to the amidase family
NMKPALMA_02171	1.26e-60	-	-	-	-	-	-	-	-
NMKPALMA_02172	4.03e-98	-	-	-	S	-	-	-	Protein of unknown function (DUF805)
NMKPALMA_02173	0.0	hsdM	2.1.1.72	-	V	ko:K03427	-	ko00000,ko01000,ko02048	type I restriction-modification system
NMKPALMA_02174	2.61e-59	-	3.1.21.3	-	V	ko:K01154	-	ko00000,ko01000,ko02048	Type I restriction modification DNA specificity domain
NMKPALMA_02175	1.68e-229	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
NMKPALMA_02176	3.61e-43	-	3.1.21.3	-	V	ko:K01154	-	ko00000,ko01000,ko02048	Restriction endonuclease S subunits
NMKPALMA_02177	3.56e-51	-	3.1.21.3	-	V	ko:K01154	-	ko00000,ko01000,ko02048	Type I restriction
NMKPALMA_02178	0.0	hsdR	3.1.21.3	-	V	ko:K01153	-	ko00000,ko01000,ko02048	Subunit R is required for both nuclease and ATPase activities, but not for modification
NMKPALMA_02179	1.5e-48	higA	-	-	K	ko:K21498	-	ko00000,ko02048	addiction module antidote protein HigA
NMKPALMA_02180	0.0	-	-	-	L	-	-	-	PLD-like domain
NMKPALMA_02182	2.22e-229	rihA	-	-	F	ko:K01250	-	ko00000,ko01000	Inosine-uridine preferring nucleoside hydrolase
NMKPALMA_02183	8.53e-228	ribD	1.1.1.193, 3.5.4.26	-	H	ko:K11752	ko00740,ko01100,ko01110,ko02024,map00740,map01100,map01110,map02024	ko00000,ko00001,ko00002,ko01000	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
NMKPALMA_02184	2.67e-121	ribE	2.5.1.9	-	H	ko:K00793	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Riboflavin synthase
NMKPALMA_02185	2.95e-283	ribBA	3.5.4.25, 4.1.99.12	-	H	ko:K14652	ko00740,ko00790,ko01100,ko01110,map00740,map00790,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate
NMKPALMA_02186	6.42e-101	ribH	2.5.1.78	-	H	ko:K00794	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin
NMKPALMA_02187	2.12e-145	-	-	-	T	ko:K10716	-	ko00000,ko02000	Ion transport 2 domain protein
NMKPALMA_02188	0.0	yfhO	-	-	S	-	-	-	Bacterial membrane protein YfhO
NMKPALMA_02189	2.07e-263	-	-	-	G	-	-	-	Transporter, major facilitator family protein
NMKPALMA_02190	2.88e-141	yvrI	-	-	K	ko:K03091,ko:K03093	-	ko00000,ko03021	sigma factor activity
NMKPALMA_02191	1.93e-84	yuxO	-	-	Q	-	-	-	Thioesterase superfamily
NMKPALMA_02192	2.33e-199	menB	4.1.3.36	-	H	ko:K01661	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
NMKPALMA_02193	0.0	menE	6.2.1.26	-	H	ko:K01911	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Belongs to the ATP-dependent AMP-binding enzyme family. MenE subfamily
NMKPALMA_02194	0.0	feoB	-	-	P	ko:K04759	-	ko00000,ko02000	transporter of a GTP-driven Fe(2 ) uptake system
NMKPALMA_02195	9.89e-43	feoA	-	-	P	ko:K04758	-	ko00000,ko02000	FeoA domain
NMKPALMA_02196	1.56e-184	sufC	-	-	O	ko:K09013	-	ko00000,ko02000	FeS assembly ATPase SufC
NMKPALMA_02197	1e-306	sufD	-	-	O	ko:K07033,ko:K09015	-	ko00000	FeS assembly protein SufD
NMKPALMA_02198	2.6e-298	sufS	2.8.1.7, 4.4.1.16	-	E	ko:K11717	ko00450,ko01100,map00450,map01100	ko00000,ko00001,ko01000	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
NMKPALMA_02199	9.11e-106	nifU	-	-	C	ko:K04488	-	ko00000	SUF system FeS assembly protein, NifU family
NMKPALMA_02200	0.0	sufB	-	-	O	ko:K07033,ko:K09014	-	ko00000	assembly protein SufB
NMKPALMA_02201	1.18e-76	-	-	-	S	-	-	-	Iron-sulfur cluster assembly protein
NMKPALMA_02202	6.68e-206	-	-	-	K	ko:K20480	ko02024,map02024	ko00000,ko00001,ko03000	Helix-turn-helix
NMKPALMA_02203	1.61e-144	nreC	-	-	K	ko:K07696	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	PFAM regulatory protein LuxR
NMKPALMA_02204	2.38e-50	-	-	-	S	-	-	-	Cytochrome B5
NMKPALMA_02205	3.73e-199	yitU	3.1.3.104	-	S	ko:K21064	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	hydrolase
NMKPALMA_02206	0.0	rsmF	-	-	J	-	-	-	NOL1 NOP2 sun family protein
NMKPALMA_02207	3.12e-191	-	-	-	O	-	-	-	Band 7 protein
NMKPALMA_02208	0.0	lytS	2.7.13.3	-	T	ko:K07704	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	LytS YhcK-type transmembrane receptor domain protein
NMKPALMA_02209	2.9e-169	lytT	-	-	K	ko:K07705	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	response regulator receiver
NMKPALMA_02210	3.69e-87	lrgA	-	-	S	ko:K05338	ko02020,map02020	ko00000,ko00001,ko02000	LrgA family
NMKPALMA_02211	5.11e-160	lrgB	-	-	M	ko:K05339	ko02020,map02020	ko00000,ko00001	LrgB-like family
NMKPALMA_02212	3.26e-227	ldh	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	Belongs to the LDH MDH superfamily. LDH family
NMKPALMA_02213	2.02e-214	scrK	2.7.1.4	-	GK	ko:K00847	ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100	ko00000,ko00001,ko01000	ROK family
NMKPALMA_02214	5.49e-238	galR	-	-	K	ko:K02529	-	ko00000,ko03000	Periplasmic binding protein-like domain
NMKPALMA_02215	0.0	melA	3.2.1.22	-	G	ko:K07407	ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603	ko00000,ko00001,ko01000	alpha-galactosidase
NMKPALMA_02216	1.95e-118	-	-	-	S	ko:K08996	-	ko00000	Protein of unknown function (DUF1440)
NMKPALMA_02217	4.42e-248	fni	5.3.3.2	-	C	ko:K01823	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
NMKPALMA_02218	4.11e-274	mvaK2	2.7.4.2	-	I	ko:K00938	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	phosphomevalonate kinase
NMKPALMA_02219	1.16e-215	mvaD	4.1.1.33	-	I	ko:K01597	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	diphosphomevalonate decarboxylase
NMKPALMA_02220	1.04e-219	mvk	2.7.1.36	-	I	ko:K00869	ko00900,ko01100,ko01110,ko01130,ko04146,map00900,map01100,map01110,map01130,map04146	ko00000,ko00001,ko00002,ko01000	mevalonate kinase
NMKPALMA_02221	0.0	dinG	3.6.4.12	-	L	ko:K03722	-	ko00000,ko01000,ko03400	helicase involved in DNA repair and perhaps also replication
NMKPALMA_02222	3.7e-112	ypmB	-	-	S	-	-	-	Protein conserved in bacteria
NMKPALMA_02223	5e-161	dnaD	-	-	L	ko:K02086	-	ko00000	DnaD domain protein
NMKPALMA_02224	2.42e-208	-	-	-	EG	-	-	-	EamA-like transporter family
NMKPALMA_02225	0.0	ponA	2.4.1.129, 3.4.16.4	GT51	M	ko:K05366	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01003,ko01011	penicillin-binding protein 1A
NMKPALMA_02226	1.41e-152	recU	-	-	L	ko:K03700	-	ko00000,ko03400	Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
NMKPALMA_02227	6.54e-128	ypsA	-	-	S	-	-	-	Belongs to the UPF0398 family
NMKPALMA_02228	6.82e-74	gpsB	-	-	D	-	-	-	Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
NMKPALMA_02229	2.49e-110	-	-	-	F	ko:K03647	-	ko00000	Belongs to the NrdI family
NMKPALMA_02230	2.52e-284	ypsC	-	-	L	ko:K07444	-	ko00000,ko01000	Belongs to the methyltransferase superfamily
NMKPALMA_02231	7.66e-92	rnhA	3.1.26.4	-	L	ko:K03469	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Ribonuclease HI
NMKPALMA_02232	1.49e-84	esbA	-	-	S	-	-	-	Family of unknown function (DUF5322)
NMKPALMA_02233	1.79e-96	lspA	3.4.23.36	-	MU	ko:K03101	ko03060,map03060	ko00000,ko00001,ko01000,ko01002	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
NMKPALMA_02234	1.96e-222	rluD	5.4.99.23	-	J	ko:K06180	-	ko00000,ko01000,ko03009	Responsible for synthesis of pseudouridine from uracil
NMKPALMA_02235	1.25e-261	carA	6.3.5.5	-	F	ko:K01956	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the CarA family
NMKPALMA_02236	0.0	carB	6.3.5.5	-	F	ko:K01955	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthase
NMKPALMA_02237	0.0	FbpA	-	-	K	-	-	-	Fibronectin-binding protein
NMKPALMA_02238	3.45e-206	-	-	-	S	-	-	-	EDD domain protein, DegV family
NMKPALMA_02239	4.84e-124	-	-	-	-	-	-	-	-
NMKPALMA_02240	2.14e-154	yagB	-	-	S	ko:K06950	-	ko00000	Metal dependent phosphohydrolases with conserved 'HD' motif.
NMKPALMA_02241	3.44e-201	gspA	-	-	M	-	-	-	family 8
NMKPALMA_02242	1.64e-203	-	-	-	S	-	-	-	Alpha beta hydrolase
NMKPALMA_02243	1.11e-123	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
NMKPALMA_02244	2.5e-32	-	-	-	S	-	-	-	Cupin domain
NMKPALMA_02245	6.58e-61	-	-	-	S	-	-	-	UPF0756 membrane protein
NMKPALMA_02246	7.12e-310	-	-	-	U	-	-	-	Belongs to the major facilitator superfamily
NMKPALMA_02247	1.68e-98	atkY	-	-	K	ko:K02171	ko01501,map01501	ko00000,ko00001,ko00002,ko01504,ko03000	Copper transport repressor CopY TcrY
NMKPALMA_02248	1.84e-316	yhdP	-	-	S	-	-	-	Transporter associated domain
NMKPALMA_02249	0.0	ubiB	-	-	S	ko:K03688	-	ko00000	ABC1 family
NMKPALMA_02250	2.58e-186	-	-	-	S	-	-	-	DUF218 domain
NMKPALMA_02251	3.39e-90	-	-	-	E	-	-	-	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
NMKPALMA_02252	7.52e-78	crcB	-	-	D	ko:K06199	-	ko00000,ko02000	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
NMKPALMA_02253	5.16e-72	crcB	-	-	U	ko:K06199	-	ko00000,ko02000	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
NMKPALMA_02254	0.0	uvrA2	-	-	L	ko:K03701	ko03420,map03420	ko00000,ko00001,ko03400	excinuclease ABC, A subunit
NMKPALMA_02255	8.31e-158	-	-	-	S	-	-	-	SNARE associated Golgi protein
NMKPALMA_02256	8.97e-292	-	-	-	N	ko:K09384	-	ko00000	Uncharacterized conserved protein (DUF2075)
NMKPALMA_02257	0.0	dxs	2.2.1.7	-	H	ko:K01662	ko00730,ko00900,ko01100,ko01110,ko01130,map00730,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
NMKPALMA_02259	0.0	yifK	-	-	E	ko:K03293	-	ko00000	Amino acid permease
NMKPALMA_02260	2.42e-202	endA	-	-	V	ko:K15051	-	ko00000	DNA/RNA non-specific endonuclease
NMKPALMA_02261	0.0	-	-	-	I	-	-	-	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
NMKPALMA_02262	5.85e-56	-	-	-	S	ko:K09790	-	ko00000	Protein of unknown function (DUF454)
NMKPALMA_02263	9.59e-96	-	-	-	S	-	-	-	Protein of unknown function (DUF3290)
NMKPALMA_02264	1.7e-148	-	-	-	S	-	-	-	Protein of unknown function (DUF421)
NMKPALMA_02265	1.79e-210	-	-	-	S	-	-	-	Alpha/beta hydrolase of unknown function (DUF915)
NMKPALMA_02266	6.9e-27	-	-	-	-	-	-	-	-
NMKPALMA_02267	1.14e-116	ntd	2.4.2.6	-	F	ko:K08728	ko00240,map00240	ko00000,ko00001,ko01000	Nucleoside
NMKPALMA_02268	2.77e-192	-	3.1.3.102, 3.1.3.104	-	S	ko:K20861	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	hydrolase
NMKPALMA_02269	1.94e-64	-	-	-	S	-	-	-	Lipopolysaccharide assembly protein A domain
NMKPALMA_02271	4.88e-62	int2	-	-	L	-	-	-	Belongs to the 'phage' integrase family
NMKPALMA_02274	0.0	-	-	-	L	-	-	-	Transposase
NMKPALMA_02275	0.0	serS	6.1.1.11	-	J	ko:K01875	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
NMKPALMA_02276	1.51e-290	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein