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ORF_ID	e_value	Gene_name	EC_number	CAZy	COGs	KEGG_ko	KEGG_Pathway	BRITE	Description
PHMCMLLI_00001	2.53e-251	-	-	-	L	-	-	-	Transposase
PHMCMLLI_00002	0.0	-	-	-	M	-	-	-	ErfK YbiS YcfS YnhG
PHMCMLLI_00003	7.16e-39	bamA	-	-	GM	ko:K07277,ko:K12573	ko03018,map03018	ko00000,ko00001,ko01000,ko02000,ko03016,ko03019,ko03029	domain, Protein
PHMCMLLI_00004	7.18e-86	-	-	-	K	-	-	-	Transcriptional regulator, GntR family
PHMCMLLI_00005	1.69e-197	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PHMCMLLI_00006	3.34e-147	-	-	-	-	-	-	-	-
PHMCMLLI_00007	9.48e-183	-	-	-	G	-	-	-	MucBP domain
PHMCMLLI_00008	2.59e-129	-	-	-	S	-	-	-	Pfam:DUF3816
PHMCMLLI_00009	0.0	clpE	-	-	O	ko:K03697,ko:K04086	-	ko00000,ko03110	Belongs to the ClpA ClpB family
PHMCMLLI_00010	1.38e-37	-	-	-	-	-	-	-	-
PHMCMLLI_00011	3.69e-54	ptsH	-	-	G	ko:K11189	-	ko00000,ko02000	phosphocarrier protein HPR
PHMCMLLI_00012	0.0	ptsI	2.7.3.9	-	G	ko:K08483	ko02060,map02060	ko00000,ko00001,ko01000,ko02000	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
PHMCMLLI_00013	4.8e-251	-	-	-	L	-	-	-	Transposase
PHMCMLLI_00014	3.35e-116	pgpA	-	-	I	-	-	-	Phosphatidylglycerophosphatase A
PHMCMLLI_00015	6.05e-225	ABC-SBP	-	-	S	ko:K01989	-	ko00000,ko00002,ko02000	ABC transporter
PHMCMLLI_00016	2.63e-115	rlmH	2.1.1.177	-	J	ko:K00783	-	ko00000,ko01000,ko03009	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
PHMCMLLI_00018	9.06e-125	-	-	-	S	-	-	-	reductase
PHMCMLLI_00019	6.23e-288	dhaT	1.1.1.202	-	C	ko:K00086	ko00561,ko00640,map00561,map00640	ko00000,ko00001,ko01000	Dehydrogenase
PHMCMLLI_00020	1.39e-198	-	-	-	U	ko:K05340	-	ko00000,ko02000	sugar transport
PHMCMLLI_00021	3.57e-191	-	-	-	E	-	-	-	Glyoxalase-like domain
PHMCMLLI_00022	7.14e-188	-	1.5.1.2	-	E	ko:K00286	ko00330,ko01100,ko01110,ko01130,ko01230,map00330,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
PHMCMLLI_00023	0.0	gabD	1.2.1.16, 1.2.1.20, 1.2.1.79	-	C	ko:K00135	ko00250,ko00310,ko00350,ko00650,ko00760,ko01100,ko01120,map00250,map00310,map00350,map00650,map00760,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Belongs to the aldehyde dehydrogenase family
PHMCMLLI_00024	5.81e-200	hlyD3	-	-	M	ko:K02005	-	ko00000	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PHMCMLLI_00025	5.67e-166	-	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter
PHMCMLLI_00026	2.59e-277	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	MacB-like periplasmic core domain
PHMCMLLI_00027	1.82e-65	-	-	-	-	-	-	-	-
PHMCMLLI_00028	0.0	-	-	-	S	-	-	-	Putative peptidoglycan binding domain
PHMCMLLI_00030	2.44e-69	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
PHMCMLLI_00031	7.3e-111	-	-	-	K	-	-	-	FR47-like protein
PHMCMLLI_00032	3.98e-159	hisK	3.1.3.15	-	E	ko:K04486	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Histidinol phosphatase and related hydrolases of the PHP family
PHMCMLLI_00034	1.62e-96	-	-	-	O	-	-	-	OsmC-like protein
PHMCMLLI_00035	1.54e-224	ldhD	1.1.1.28	-	CH	ko:K03778	ko00620,ko01120,map00620,map01120	ko00000,ko00001,ko01000	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PHMCMLLI_00036	2.13e-277	-	-	-	E	ko:K00841	ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase
PHMCMLLI_00037	8.68e-44	-	-	-	-	-	-	-	-
PHMCMLLI_00038	0.0	clpE	-	-	O	ko:K03697,ko:K04086	-	ko00000,ko03110	associated with various cellular activities
PHMCMLLI_00040	2.16e-251	-	-	-	L	-	-	-	Transposase
PHMCMLLI_00041	0.0	ganB	3.2.1.89	-	G	ko:K01224	-	ko00000,ko01000	arabinogalactan
PHMCMLLI_00043	1.82e-86	XK27_01125	-	-	L	ko:K07484	-	ko00000	PFAM IS66 Orf2 family protein
PHMCMLLI_00044	4.61e-251	-	-	-	L	-	-	-	Transposase
PHMCMLLI_00045	3.84e-206	rbsK	2.7.1.15	-	H	ko:K00852	ko00030,map00030	ko00000,ko00001,ko01000	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PHMCMLLI_00046	1.4e-235	rbsR	-	-	K	ko:K02529	-	ko00000,ko03000	Periplasmic binding proteins and sugar binding domain of LacI family
PHMCMLLI_00047	8.84e-146	-	-	-	-	-	-	-	-
PHMCMLLI_00048	6.18e-150	dgk2	-	-	F	-	-	-	deoxynucleoside kinase
PHMCMLLI_00049	2.97e-229	-	-	-	NU	-	-	-	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
PHMCMLLI_00050	5.35e-113	-	-	-	T	-	-	-	Belongs to the universal stress protein A family
PHMCMLLI_00051	0.0	pepV	3.5.1.18	-	E	ko:K01270,ko:K01274,ko:K01439	ko00300,ko00480,ko01100,ko01120,ko01230,map00300,map00480,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000,ko01002	dipeptidase PepV
PHMCMLLI_00052	8.7e-197	nnrD	4.2.1.136, 5.1.99.6	-	H	ko:K17758,ko:K17759	-	ko00000,ko01000	Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
PHMCMLLI_00053	2.34e-25	-	-	-	K	-	-	-	Cro/C1-type HTH DNA-binding domain
PHMCMLLI_00054	5.59e-83	-	-	-	S	-	-	-	Polysaccharide biosynthesis protein
PHMCMLLI_00055	2.33e-47	-	-	-	S	-	-	-	Glycosyltransferase like family 2
PHMCMLLI_00056	9.95e-19	-	-	-	M	-	-	-	Glycosyltransferase sugar-binding region containing DXD motif
PHMCMLLI_00057	8.8e-09	-	-	-	M	-	-	-	Glycosyltransferase, group 1 family
PHMCMLLI_00059	1.89e-112	-	-	-	M	-	-	-	Glycosyl transferase family 2
PHMCMLLI_00060	7.26e-63	capM	-	-	M	ko:K13012	-	ko00000,ko01005	Bacterial sugar transferase
PHMCMLLI_00061	3.09e-150	ywqD	-	-	D	-	-	-	Capsular exopolysaccharide family
PHMCMLLI_00062	8.3e-179	epsB	-	-	M	-	-	-	biosynthesis protein
PHMCMLLI_00063	2.69e-214	brpA	-	-	K	-	-	-	Cell envelope-like function transcriptional attenuator common domain protein
PHMCMLLI_00064	1.87e-88	-	-	-	K	-	-	-	Transcriptional regulator, HxlR family
PHMCMLLI_00065	1.01e-163	-	-	-	-	-	-	-	-
PHMCMLLI_00066	4.76e-131	-	-	-	K	-	-	-	DNA-templated transcription, initiation
PHMCMLLI_00067	1.96e-49	-	-	-	-	-	-	-	-
PHMCMLLI_00068	4.72e-108	-	-	-	-	-	-	-	-
PHMCMLLI_00069	0.0	glpK	2.7.1.30	-	F	ko:K00864	ko00561,ko01100,ko03320,ko04626,map00561,map01100,map03320,map04626	ko00000,ko00001,ko01000,ko04147	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
PHMCMLLI_00070	1.1e-34	dmpI	5.3.2.6	-	G	ko:K01821	ko00362,ko00621,ko00622,ko01100,ko01120,ko01220,map00362,map00621,map00622,map01100,map01120,map01220	ko00000,ko00001,ko00002,ko01000	Belongs to the 4-oxalocrotonate tautomerase family
PHMCMLLI_00071	0.0	yjbQ	-	-	P	ko:K03455,ko:K03499	-	ko00000,ko02000	TrkA C-terminal domain protein
PHMCMLLI_00072	0.0	pepD4	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
PHMCMLLI_00074	6.82e-74	gpsB	-	-	D	-	-	-	Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
PHMCMLLI_00075	1.05e-133	ypsA	-	-	S	-	-	-	Belongs to the UPF0398 family
PHMCMLLI_00076	8.19e-152	recU	-	-	L	ko:K03700	-	ko00000,ko03400	Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
PHMCMLLI_00077	0.0	ponA	2.4.1.129, 3.4.16.4	GT51	M	ko:K05366	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01003,ko01011	penicillin-binding protein 1A
PHMCMLLI_00078	2.42e-208	-	-	-	EG	-	-	-	EamA-like transporter family
PHMCMLLI_00079	2.48e-161	dnaD	-	-	L	ko:K02086	-	ko00000	DnaD domain protein
PHMCMLLI_00080	3.7e-112	ypmB	-	-	S	-	-	-	Protein conserved in bacteria
PHMCMLLI_00081	0.0	dinG	3.6.4.12	-	L	ko:K03722	-	ko00000,ko01000,ko03400	helicase involved in DNA repair and perhaps also replication
PHMCMLLI_00082	1.42e-217	mvk	2.7.1.36	-	I	ko:K00869	ko00900,ko01100,ko01110,ko01130,ko04146,map00900,map01100,map01110,map01130,map04146	ko00000,ko00001,ko00002,ko01000	mevalonate kinase
PHMCMLLI_00083	4.91e-217	mvaD	4.1.1.33	-	I	ko:K01597	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	diphosphomevalonate decarboxylase
PHMCMLLI_00084	4.11e-274	mvaK2	2.7.4.2	-	I	ko:K00938	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	phosphomevalonate kinase
PHMCMLLI_00085	8.91e-248	fni	5.3.3.2	-	C	ko:K01823	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
PHMCMLLI_00086	5.52e-119	-	-	-	S	ko:K08996	-	ko00000	Protein of unknown function (DUF1440)
PHMCMLLI_00087	0.0	melA	3.2.1.22	-	G	ko:K07407	ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603	ko00000,ko00001,ko01000	alpha-galactosidase
PHMCMLLI_00088	3.22e-246	galR	-	-	K	ko:K02529	-	ko00000,ko03000	Periplasmic binding protein-like domain
PHMCMLLI_00089	5.79e-214	scrK	2.7.1.4	-	GK	ko:K00847	ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100	ko00000,ko00001,ko01000	ROK family
PHMCMLLI_00090	1.19e-229	ldh	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	Belongs to the LDH MDH superfamily. LDH family
PHMCMLLI_00091	4.38e-161	lrgB	-	-	M	ko:K05339	ko02020,map02020	ko00000,ko00001	LrgB-like family
PHMCMLLI_00092	3.69e-87	lrgA	-	-	S	ko:K05338	ko02020,map02020	ko00000,ko00001,ko02000	LrgA family
PHMCMLLI_00093	2.9e-169	lytT	-	-	K	ko:K07705	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	response regulator receiver
PHMCMLLI_00094	0.0	lytS	2.7.13.3	-	T	ko:K07704	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	LytS YhcK-type transmembrane receptor domain protein
PHMCMLLI_00095	1.54e-191	-	-	-	O	-	-	-	Band 7 protein
PHMCMLLI_00096	0.0	rsmF	-	-	J	-	-	-	NOL1 NOP2 sun family protein
PHMCMLLI_00097	2.83e-199	yitU	3.1.3.104	-	S	ko:K21064	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	hydrolase
PHMCMLLI_00098	1.43e-51	-	-	-	S	-	-	-	Cytochrome B5
PHMCMLLI_00099	6.38e-151	nreC	-	-	K	ko:K07696	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	PFAM regulatory protein LuxR
PHMCMLLI_00100	1.35e-205	-	-	-	K	ko:K20480	ko02024,map02024	ko00000,ko00001,ko03000	Helix-turn-helix
PHMCMLLI_00101	1.18e-76	-	-	-	S	-	-	-	Iron-sulfur cluster assembly protein
PHMCMLLI_00102	0.0	sufB	-	-	O	ko:K07033,ko:K09014	-	ko00000	assembly protein SufB
PHMCMLLI_00103	5.28e-105	nifU	-	-	C	ko:K04488	-	ko00000	SUF system FeS assembly protein, NifU family
PHMCMLLI_00104	7.46e-298	sufS	2.8.1.7, 4.4.1.16	-	E	ko:K11717	ko00450,ko01100,map00450,map01100	ko00000,ko00001,ko01000	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
PHMCMLLI_00105	1.85e-302	sufD	-	-	O	ko:K07033,ko:K09015	-	ko00000	FeS assembly protein SufD
PHMCMLLI_00106	3.14e-184	sufC	-	-	O	ko:K09013	-	ko00000,ko02000	FeS assembly ATPase SufC
PHMCMLLI_00107	9.89e-43	feoA	-	-	P	ko:K04758	-	ko00000,ko02000	FeoA domain
PHMCMLLI_00108	0.0	feoB	-	-	P	ko:K04759	-	ko00000,ko02000	transporter of a GTP-driven Fe(2 ) uptake system
PHMCMLLI_00109	1.06e-281	-	-	-	L	ko:K07487	-	ko00000	Transposase
PHMCMLLI_00110	1.35e-277	-	-	-	L	ko:K07484	-	ko00000	Transposase IS66 family
PHMCMLLI_00111	3.03e-226	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
PHMCMLLI_00112	0.0	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
PHMCMLLI_00114	4.66e-197	metQ1	-	-	P	ko:K02073	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the nlpA lipoprotein family
PHMCMLLI_00115	3.82e-114	luxS	4.4.1.21	-	H	ko:K07173	ko00270,ko01100,ko01230,ko02024,ko02026,ko05111,map00270,map01100,map01230,map02024,map02026,map05111	ko00000,ko00001,ko00002,ko01000	Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
PHMCMLLI_00116	7.74e-162	-	-	-	O	-	-	-	Zinc-dependent metalloprotease
PHMCMLLI_00117	2.26e-149	-	-	-	S	-	-	-	Membrane
PHMCMLLI_00118	2.39e-254	-	1.1.1.1	-	E	ko:K00001	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	alcohol dehydrogenase
PHMCMLLI_00119	1.04e-115	-	-	-	S	-	-	-	Domain of unknown function (DUF4767)
PHMCMLLI_00120	3.7e-19	-	-	-	-	-	-	-	-
PHMCMLLI_00121	1.29e-267	thiP	-	-	U	-	-	-	Belongs to the purine-cytosine permease (2.A.39) family
PHMCMLLI_00122	4.02e-121	-	-	-	K	-	-	-	PFAM GCN5-related N-acetyltransferase
PHMCMLLI_00123	5.69e-105	-	-	-	-	-	-	-	-
PHMCMLLI_00124	8.4e-162	-	-	-	M	-	-	-	Lysin motif
PHMCMLLI_00125	1.35e-248	-	-	-	EGP	-	-	-	Major Facilitator
PHMCMLLI_00126	1.86e-48	-	-	-	D	-	-	-	Antitoxin component of a toxin-antitoxin (TA) module
PHMCMLLI_00127	3.41e-71	-	-	-	S	-	-	-	ParE toxin of type II toxin-antitoxin system, parDE
PHMCMLLI_00128	1.59e-129	ywlG	-	-	S	-	-	-	Belongs to the UPF0340 family
PHMCMLLI_00129	7.6e-123	gshAB	6.3.2.2	-	H	ko:K01919	ko00270,ko00480,ko01100,map00270,map00480,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the glutamate--cysteine ligase type 1 family
PHMCMLLI_00130	4.79e-292	deoB	5.4.2.7	-	G	ko:K01839	ko00030,ko00230,map00030,map00230	ko00000,ko00001,ko01000	Phosphotransfer between the C1 and C5 carbon atoms of pentose
PHMCMLLI_00131	5.06e-178	pnuC	-	-	H	ko:K03811	-	ko00000,ko02000	nicotinamide mononucleotide transporter
PHMCMLLI_00132	2.37e-164	udp	2.4.2.3	-	F	ko:K00757	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	Phosphorylase superfamily
PHMCMLLI_00133	6.31e-128	-	-	-	K	-	-	-	Cyclic nucleotide-binding domain
PHMCMLLI_00134	1.5e-161	-	-	-	S	-	-	-	PFAM Archaeal ATPase
PHMCMLLI_00135	5.71e-204	-	-	-	J	-	-	-	Methyltransferase
PHMCMLLI_00136	1.3e-169	oxlT	-	-	P	ko:K08177	-	ko00000,ko02000	Major Facilitator Superfamily
PHMCMLLI_00137	0.0	guaA	6.3.5.2	-	F	ko:K01951	ko00230,ko00983,ko01100,map00230,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko01002	Catalyzes the synthesis of GMP from XMP
PHMCMLLI_00139	1.07e-282	-	-	-	S	ko:K07133	-	ko00000	cog cog1373
PHMCMLLI_00140	5.86e-226	coaA	2.7.1.33	-	F	ko:K00867	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Pantothenic acid kinase
PHMCMLLI_00141	0.0	ltaS	2.7.8.20	-	M	ko:K19005	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
PHMCMLLI_00142	5.51e-206	-	-	-	EG	-	-	-	EamA-like transporter family
PHMCMLLI_00143	0.0	nox	1.6.3.4	-	C	ko:K17869	-	ko00000,ko01000	NADH oxidase
PHMCMLLI_00144	3.01e-308	nox	1.6.3.4	-	C	ko:K17869	-	ko00000,ko01000	NADH oxidase
PHMCMLLI_00145	0.0	helD	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	DNA helicase
PHMCMLLI_00146	7.73e-147	-	-	-	S	ko:K03975	-	ko00000	SNARE associated Golgi protein
PHMCMLLI_00147	3.87e-161	pgm3	-	-	G	-	-	-	phosphoglycerate mutase
PHMCMLLI_00148	4.26e-290	hflX	-	-	S	ko:K03665	-	ko00000,ko03009	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
PHMCMLLI_00149	7.24e-14	-	-	-	-	-	-	-	-
PHMCMLLI_00150	1.98e-42	-	-	-	S	-	-	-	Transglycosylase associated protein
PHMCMLLI_00151	6.47e-10	-	-	-	S	-	-	-	CsbD-like
PHMCMLLI_00152	6.6e-230	-	1.1.1.28	-	CH	ko:K03778	ko00620,ko01120,map00620,map01120	ko00000,ko00001,ko01000	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PHMCMLLI_00153	5.35e-279	yhgE	-	-	V	ko:K01421	-	ko00000	domain protein
PHMCMLLI_00154	2.14e-123	-	-	-	K	-	-	-	Transcriptional regulator (TetR family)
PHMCMLLI_00155	6.09e-53	pspC	-	-	KT	ko:K03973	-	ko00000,ko02048,ko03000	PspC domain protein
PHMCMLLI_00156	3.28e-193	-	-	-	-	-	-	-	-
PHMCMLLI_00157	1.94e-37	-	3.2.1.14	GH18	-	ko:K01183	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	-
PHMCMLLI_00158	1.27e-108	zur	-	-	P	ko:K02076,ko:K03711	-	ko00000,ko03000	Belongs to the Fur family
PHMCMLLI_00159	4.1e-134	gmk2	2.7.4.8	-	F	ko:K00942	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko00002,ko01000	Guanylate kinase
PHMCMLLI_00160	2.08e-96	-	-	-	F	-	-	-	Nudix hydrolase
PHMCMLLI_00161	0.0	yhdG	-	-	E	ko:K03294	-	ko00000	Amino Acid
PHMCMLLI_00162	2.15e-299	-	-	-	EGP	ko:K08368	-	ko00000,ko02000	Sugar (and other) transporter
PHMCMLLI_00163	3.81e-88	XK27_01125	-	-	L	ko:K07484	-	ko00000	PFAM IS66 Orf2 family protein
PHMCMLLI_00165	1.69e-212	glsA	3.5.1.2	-	E	ko:K01425	ko00220,ko00250,ko00471,ko01100,ko04724,ko04727,ko04964,ko05206,ko05230,map00220,map00250,map00471,map01100,map04724,map04727,map04964,map05206,map05230	ko00000,ko00001,ko01000	Belongs to the glutaminase family
PHMCMLLI_00166	0.0	dltD	-	-	M	ko:K03740	ko01503,ko02020,ko05150,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01504	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
PHMCMLLI_00167	4.98e-48	dltC	6.1.1.13	-	J	ko:K14188	ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01000,ko01504	Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PHMCMLLI_00168	1.83e-299	dltB	-	-	M	ko:K03739	ko01503,ko02020,ko05150,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01504	MBOAT, membrane-bound O-acyltransferase family
PHMCMLLI_00169	0.0	dltA	6.1.1.13	-	H	ko:K03367	ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01000,ko01504	Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PHMCMLLI_00170	2.63e-08	dltX	-	-	S	-	-	-	D-Ala-teichoic acid biosynthesis protein
PHMCMLLI_00171	1.88e-80	acpS	2.7.8.7	-	I	ko:K00997	ko00770,map00770	ko00000,ko00001,ko01000	Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
PHMCMLLI_00172	1.47e-267	alr	5.1.1.1, 5.1.1.5	-	E	ko:K01775,ko:K20707	ko00473,ko01100,ko01502,map00473,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
PHMCMLLI_00173	1.3e-82	ndoA	-	-	L	ko:K07171	-	ko00000,ko01000,ko02048	Toxic component of a toxin-antitoxin (TA) module
PHMCMLLI_00174	0.0	-	-	-	U	-	-	-	Belongs to the purine-cytosine permease (2.A.39) family
PHMCMLLI_00175	2.75e-309	codA	3.5.4.1	-	F	ko:K01485	ko00240,ko00330,ko01100,map00240,map00330,map01100	ko00000,ko00001,ko01000	cytosine deaminase
PHMCMLLI_00176	2.06e-188	mhpD	-	-	Q	ko:K02509	ko00350,ko01120,map00350,map01120	ko00000,ko00001,ko01000	hydratase
PHMCMLLI_00177	4.67e-146	-	-	-	S	-	-	-	(CBS) domain
PHMCMLLI_00178	1.38e-132	pth	3.1.1.29	-	J	ko:K01056	-	ko00000,ko01000,ko03012	The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
PHMCMLLI_00179	0.0	mfd	-	-	L	ko:K03723	ko03420,map03420	ko00000,ko00001,ko01000,ko03400	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
PHMCMLLI_00180	1.01e-52	yabO	-	-	J	-	-	-	S4 domain protein
PHMCMLLI_00181	1.44e-74	divIC	-	-	D	ko:K13052	-	ko00000,ko03036	Septum formation initiator
PHMCMLLI_00182	5.75e-103	yabR	-	-	J	ko:K07571	-	ko00000	RNA binding
PHMCMLLI_00183	0.0	tilS	2.4.2.8, 6.3.4.19	-	J	ko:K04075,ko:K15780	ko00230,ko01100,ko01110,map00230,map01100,map01110	ko00000,ko00001,ko01000,ko03016	Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
PHMCMLLI_00184	3.68e-125	hpt	2.4.2.8	-	F	ko:K00760	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the purine pyrimidine phosphoribosyltransferase family
PHMCMLLI_00185	0.0	ftsH	-	-	O	ko:K03798	-	ko00000,ko00002,ko01000,ko01002,ko03110	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
PHMCMLLI_00186	1.32e-217	hslO	-	-	O	ko:K04083	-	ko00000,ko03110	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
PHMCMLLI_00187	2.64e-242	dus	-	-	J	ko:K05540	-	ko00000,ko01000,ko03016	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PHMCMLLI_00188	0.0	lysS	6.1.1.6	-	J	ko:K04567	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-II aminoacyl-tRNA synthetase family
PHMCMLLI_00189	3.81e-88	XK27_01125	-	-	L	ko:K07484	-	ko00000	PFAM IS66 Orf2 family protein
PHMCMLLI_00193	0.0	dtpT	-	-	U	ko:K03305	-	ko00000	amino acid peptide transporter
PHMCMLLI_00194	3.07e-201	-	-	-	S	-	-	-	Calcineurin-like phosphoesterase
PHMCMLLI_00197	4.86e-149	-	-	-	-	-	-	-	-
PHMCMLLI_00198	0.0	-	-	-	EGP	-	-	-	Major Facilitator
PHMCMLLI_00199	1.01e-134	-	-	-	P	ko:K07085	-	ko00000	Predicted Permease Membrane Region
PHMCMLLI_00200	5.86e-200	-	-	-	P	ko:K07085	-	ko00000	Predicted Permease Membrane Region
PHMCMLLI_00201	3.27e-167	racX	5.1.1.13	-	M	ko:K01779	ko00250,ko01054,map00250,map01054	ko00000,ko00001,ko01000	Belongs to the aspartate glutamate racemases family
PHMCMLLI_00202	3.54e-165	yvoA_2	-	-	K	ko:K03710	-	ko00000,ko03000	UbiC transcription regulator-associated domain protein
PHMCMLLI_00203	0.0	pncB	6.3.4.21	-	F	ko:K00763	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
PHMCMLLI_00204	1.24e-195	nadE	6.3.1.5	-	F	ko:K01916	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
PHMCMLLI_00205	0.0	tex	-	-	K	ko:K06959	-	ko00000	Tex-like protein N-terminal domain protein
PHMCMLLI_00206	1.16e-111	ydcK	-	-	S	ko:K03095	-	ko00000	Belongs to the SprT family
PHMCMLLI_00208	0.0	lacL	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 2 family
PHMCMLLI_00209	9.11e-236	lacM	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	beta-galactosidase
PHMCMLLI_00210	0.0	-	-	-	S	-	-	-	Bacterial membrane protein, YfhO
PHMCMLLI_00211	4.32e-172	gpmA1	5.4.2.11	-	G	ko:K01834	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PHMCMLLI_00212	6.27e-216	-	-	-	I	-	-	-	alpha/beta hydrolase fold
PHMCMLLI_00213	9e-276	mccB	4.4.1.1, 4.4.1.2, 4.4.1.8	-	E	ko:K01760,ko:K17217	ko00260,ko00270,ko00450,ko00920,ko01100,ko01110,ko01130,ko01230,map00260,map00270,map00450,map00920,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	cystathionine
PHMCMLLI_00214	3.36e-154	tcyB	-	-	E	ko:K10009	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
PHMCMLLI_00215	3.52e-173	-	-	-	E	ko:K10010	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
PHMCMLLI_00216	1.01e-179	tcyA	-	-	ET	ko:K02424	ko02010,map02010	ko00000,ko00001,ko00002,ko02000,ko02035	Belongs to the bacterial solute-binding protein 3 family
PHMCMLLI_00217	0.0	pepC	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	Peptidase C1-like family
PHMCMLLI_00218	2.5e-162	rpiA	5.3.1.6	-	G	ko:K01807	ko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
PHMCMLLI_00219	6.72e-66	yjdJ	-	-	S	ko:K06975	-	ko00000	GCN5-related N-acetyl-transferase
PHMCMLLI_00220	1.15e-127	dut	3.6.1.23	-	F	ko:K01520	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	dUTP diphosphatase
PHMCMLLI_00221	0.0	radA	-	-	O	ko:K04485	-	ko00000,ko03400	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
PHMCMLLI_00222	2.96e-265	yacL	-	-	S	-	-	-	domain protein
PHMCMLLI_00223	0.0	cysS	6.1.1.16	-	J	ko:K01883	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-I aminoacyl-tRNA synthetase family
PHMCMLLI_00224	6.19e-94	mrnC	-	-	J	ko:K11145	-	ko00000,ko01000,ko03009	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
PHMCMLLI_00225	1.82e-175	trmH	2.1.1.185	-	J	ko:K03218	-	ko00000,ko01000,ko03009	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PHMCMLLI_00226	9.18e-31	rpmG	-	-	J	ko:K02913	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL33 family
PHMCMLLI_00227	7.11e-32	secE	-	-	U	ko:K03073	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
PHMCMLLI_00228	1.1e-126	nusG	-	-	K	ko:K02601	-	ko00000,ko03009,ko03021	Participates in transcription elongation, termination and antitermination
PHMCMLLI_00229	1.39e-92	rplK	-	-	J	ko:K02867	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
PHMCMLLI_00230	8.31e-158	rplA	-	-	J	ko:K02863	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
PHMCMLLI_00231	1.6e-289	aadAT	-	-	EK	ko:K05825	ko00300,ko01100,ko01130,ko01210,map00300,map01100,map01130,map01210	ko00000,ko00001,ko01000	Aminotransferase, class I
PHMCMLLI_00233	1.56e-312	-	-	-	M	-	-	-	Glycosyl transferase family group 2
PHMCMLLI_00234	2.54e-267	mnaA	5.1.3.14	-	G	ko:K01791	ko00520,ko01100,ko05111,map00520,map01100,map05111	ko00000,ko00001,ko00002,ko01000,ko01005	Belongs to the UDP-N-acetylglucosamine 2-epimerase family
PHMCMLLI_00235	3.6e-107	rplJ	-	-	J	ko:K02864	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
PHMCMLLI_00236	2.46e-72	rplL	-	-	J	ko:K02935	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
PHMCMLLI_00237	2.39e-64	-	-	-	-	-	-	-	-
PHMCMLLI_00239	1.2e-64	mscL	-	-	M	ko:K03282	-	ko00000,ko02000	Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
PHMCMLLI_00240	2.79e-75	XK27_06915	-	-	K	ko:K10947	-	ko00000,ko03000	transcriptional regulator PadR family
PHMCMLLI_00241	9.35e-128	-	-	-	S	-	-	-	Protein of unknown function (DUF1700)
PHMCMLLI_00242	1.87e-169	-	-	-	S	ko:K11621	ko02020,map02020	ko00000,ko00001	Putative adhesin
PHMCMLLI_00243	0.0	adhE	1.1.1.1, 1.2.1.10	-	C	ko:K04072	ko00010,ko00071,ko00350,ko00620,ko00625,ko00626,ko00650,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00620,map00625,map00626,map00650,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	belongs to the iron- containing alcohol dehydrogenase family
PHMCMLLI_00244	7.68e-254	nrdF	1.17.4.1	-	F	ko:K00526	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PHMCMLLI_00245	0.0	nrdE	1.17.4.1	-	F	ko:K00525	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PHMCMLLI_00246	9.33e-48	nrdH	-	-	O	ko:K06191	-	ko00000	Glutaredoxin
PHMCMLLI_00247	6.21e-119	tadA	3.5.4.33	-	F	ko:K11991	-	ko00000,ko01000,ko03016	Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
PHMCMLLI_00248	0.0	dnaX	2.7.7.7	-	L	ko:K02343	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PHMCMLLI_00249	5.87e-62	yaaK	-	-	S	ko:K09747	-	ko00000	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
PHMCMLLI_00250	4.92e-142	recR	-	-	L	ko:K06187	ko03440,map03440	ko00000,ko00001,ko03400	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
PHMCMLLI_00251	4.67e-52	-	-	-	S	-	-	-	Protein of unknown function (DUF2508)
PHMCMLLI_00252	2.23e-149	tmk	2.7.4.9	-	F	ko:K00943	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
PHMCMLLI_00253	2.83e-69	yaaQ	-	-	S	-	-	-	Cyclic-di-AMP receptor
PHMCMLLI_00254	7.47e-235	holB	2.7.7.7	-	L	ko:K02341	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III
PHMCMLLI_00255	3.71e-76	yabA	-	-	L	-	-	-	Involved in initiation control of chromosome replication
PHMCMLLI_00256	9.08e-200	rsmI	2.1.1.198	-	H	ko:K07056	-	ko00000,ko01000,ko03009	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
PHMCMLLI_00257	2.48e-175	fat	3.1.2.21	-	I	ko:K01071	ko00061,ko01100,map00061,map01100	ko00000,ko00001,ko01000,ko01004	Acyl-ACP thioesterase
PHMCMLLI_00258	3.81e-88	XK27_01125	-	-	L	ko:K07484	-	ko00000	PFAM IS66 Orf2 family protein
PHMCMLLI_00261	2.95e-46	-	-	-	-	-	-	-	-
PHMCMLLI_00262	0.0	ytgP	-	-	S	ko:K03328	-	ko00000	Polysaccharide biosynthesis protein
PHMCMLLI_00263	8.42e-55	-	-	-	-	-	-	-	-
PHMCMLLI_00264	0.0	leuS	6.1.1.4	-	J	ko:K01869	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Belongs to the class-I aminoacyl-tRNA synthetase family
PHMCMLLI_00265	6.66e-281	metK	2.5.1.6	-	H	ko:K00789	ko00270,ko01100,ko01110,ko01230,map00270,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
PHMCMLLI_00266	2.05e-126	tag1	3.2.2.20	-	L	ko:K01246	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	glycosylase
PHMCMLLI_00267	0.0	-	-	-	EGP	-	-	-	Major Facilitator
PHMCMLLI_00268	3.59e-111	perR	-	-	P	ko:K03711,ko:K09825	-	ko00000,ko03000	Belongs to the Fur family
PHMCMLLI_00269	8.16e-302	cycA	-	-	E	ko:K03293,ko:K11737	-	ko00000,ko02000	Amino acid permease
PHMCMLLI_00270	1.41e-134	-	-	-	V	-	-	-	VanZ like family
PHMCMLLI_00271	7.03e-33	-	-	-	-	-	-	-	-
PHMCMLLI_00272	5.03e-111	-	-	-	S	-	-	-	Short repeat of unknown function (DUF308)
PHMCMLLI_00273	7.91e-104	-	-	-	S	-	-	-	Psort location Cytoplasmic, score
PHMCMLLI_00274	0.0	umuC	-	-	L	ko:K03502	-	ko00000,ko03400	impB/mucB/samB family C-terminal domain
PHMCMLLI_00275	4.22e-218	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
PHMCMLLI_00276	4.63e-101	hsp	-	-	O	ko:K13993	ko04141,map04141	ko00000,ko00001,ko03110	Belongs to the small heat shock protein (HSP20) family
PHMCMLLI_00277	5.24e-196	yeaE	-	-	S	-	-	-	Aldo keto
PHMCMLLI_00278	1.06e-281	-	-	-	L	ko:K07487	-	ko00000	Transposase
PHMCMLLI_00279	1.82e-86	XK27_01125	-	-	L	ko:K07484	-	ko00000	PFAM IS66 Orf2 family protein
PHMCMLLI_00281	3.28e-156	mecA	-	-	NOT	ko:K16511	-	ko00000	Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
PHMCMLLI_00282	8.23e-88	spxA	-	-	K	ko:K16509	-	ko00000	Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
PHMCMLLI_00283	4.38e-102	traP	1.14.99.57	-	S	ko:K21481	-	ko00000,ko01000	enzyme involved in biosynthesis of extracellular polysaccharides
PHMCMLLI_00285	1.82e-86	XK27_01125	-	-	L	ko:K07484	-	ko00000	PFAM IS66 Orf2 family protein
PHMCMLLI_00287	3.66e-127	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
PHMCMLLI_00288	5.68e-313	lmrB	-	-	U	ko:K18926	-	ko00000,ko00002,ko02000	Belongs to the major facilitator superfamily
PHMCMLLI_00289	0.0	nrdD	1.1.98.6	-	F	ko:K21636	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Ribonucleoside-triphosphate reductase
PHMCMLLI_00290	1.13e-143	nrdG	1.97.1.4	-	O	ko:K04068	-	ko00000,ko01000	Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PHMCMLLI_00291	3.86e-205	-	-	-	O	-	-	-	Uncharacterized protein family (UPF0051)
PHMCMLLI_00292	2.33e-91	-	-	-	M	-	-	-	LysM domain protein
PHMCMLLI_00293	0.0	-	-	-	EP	-	-	-	Psort location Cytoplasmic, score
PHMCMLLI_00294	2.48e-141	-	-	-	M	-	-	-	LysM domain protein
PHMCMLLI_00295	6.95e-191	exoA	3.1.11.2	-	L	ko:K01142	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	exodeoxyribonuclease III
PHMCMLLI_00296	6.91e-299	-	1.3.1.1	-	E	ko:K17722	ko00240,ko00410,ko00770,ko01100,map00240,map00410,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
PHMCMLLI_00297	7.64e-308	-	1.3.1.1	-	C	ko:K17723	ko00240,ko00410,ko00770,ko01100,map00240,map00410,map00770,map01100	ko00000,ko00001,ko00002,ko01000	4Fe-4S dicluster domain
PHMCMLLI_00298	1.06e-281	-	-	-	L	ko:K07487	-	ko00000	Transposase
PHMCMLLI_00299	6.78e-136	-	-	-	K	-	-	-	Transcriptional regulator C-terminal region
PHMCMLLI_00300	3.62e-250	-	-	-	S	-	-	-	membrane
PHMCMLLI_00301	2.22e-145	-	-	-	GM	-	-	-	NAD(P)H-binding
PHMCMLLI_00302	1.01e-84	-	-	-	-	-	-	-	-
PHMCMLLI_00303	1.7e-167	-	-	-	F	-	-	-	glutamine amidotransferase
PHMCMLLI_00304	1.72e-183	-	-	-	T	-	-	-	EAL domain
PHMCMLLI_00305	0.0	yijG	-	GT2	M	ko:K11936	ko02026,map02026	ko00000,ko00001,ko01000,ko01003,ko02000	Glycosyl transferase
PHMCMLLI_00306	8.88e-112	-	-	-	-	-	-	-	-
PHMCMLLI_00307	1.47e-255	-	2.7.7.65	-	T	ko:K02488	ko02020,ko04112,map02020,map04112	ko00000,ko00001,ko00002,ko01000,ko02022	GGDEF domain
PHMCMLLI_00308	7.5e-160	-	-	-	T	-	-	-	Putative diguanylate phosphodiesterase
PHMCMLLI_00309	0.0	asnS	6.1.1.22	-	J	ko:K01893	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Asparaginyl-tRNA synthetase
PHMCMLLI_00310	3.51e-253	asnA	6.3.1.1	-	F	ko:K01914	ko00250,ko00460,ko01100,ko01110,ko01230,map00250,map00460,map01100,map01110,map01230	ko00000,ko00001,ko01000	aspartate--ammonia ligase
PHMCMLLI_00311	1.31e-121	-	-	-	S	-	-	-	ECF transporter, substrate-specific component
PHMCMLLI_00312	0.0	pepN	3.4.11.2	-	E	ko:K01256	ko00480,ko01100,map00480,map01100	ko00000,ko00001,ko01000,ko01002	aminopeptidase
PHMCMLLI_00313	8.72e-147	-	-	-	GM	-	-	-	NAD dependent epimerase dehydratase family protein
PHMCMLLI_00314	0.0	pepE	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	aminopeptidase
PHMCMLLI_00315	1.3e-120	-	3.5.1.124	-	S	ko:K03152	-	ko00000,ko01000,ko01002	DJ-1/PfpI family
PHMCMLLI_00316	1.4e-236	-	-	-	I	-	-	-	Alpha beta
PHMCMLLI_00317	0.0	qacA	-	-	EGP	-	-	-	Major Facilitator
PHMCMLLI_00318	1.02e-149	-	3.2.2.27	-	L	ko:K21929	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Uracil-DNA glycosylase
PHMCMLLI_00319	0.0	-	-	-	S	-	-	-	Putative threonine/serine exporter
PHMCMLLI_00320	8.42e-204	-	-	-	K	-	-	-	LysR family
PHMCMLLI_00321	0.0	citP	-	-	P	ko:K03319	-	ko00000	Sodium:sulfate symporter transmembrane region
PHMCMLLI_00322	0.0	frdA	1.3.5.4	-	C	ko:K00244	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	ko00000,ko00001,ko00002,ko01000	FAD binding domain
PHMCMLLI_00323	0.0	fumC	4.2.1.2	-	C	ko:K01679	ko00020,ko00620,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko04934,ko05200,ko05211,map00020,map00620,map00720,map01100,map01110,map01120,map01130,map01200,map04934,map05200,map05211	ko00000,ko00001,ko00002,ko01000	Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
PHMCMLLI_00324	0.0	mleS	1.1.1.38, 4.1.1.101	-	C	ko:K00027,ko:K22212	ko00620,ko01120,ko01200,ko02020,map00620,map01120,map01200,map02020	ko00000,ko00001,ko01000	Malic enzyme
PHMCMLLI_00325	1.06e-201	mleR	-	-	K	-	-	-	LysR family
PHMCMLLI_00326	1.17e-143	ppiB	5.2.1.8	-	G	ko:K03768	-	ko00000,ko01000,ko03110	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
PHMCMLLI_00327	5.48e-263	adh	1.1.1.1	-	C	ko:K13953	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	Zinc-binding alcohol dehydrogenase family protein
PHMCMLLI_00328	0.0	-	-	-	L	-	-	-	PFAM plasmid pRiA4b ORF-3 family protein
PHMCMLLI_00329	0.0	-	-	-	S	ko:K13730	ko05100,map05100	ko00000,ko00001	Uncharacterized protein conserved in bacteria (DUF2252)
PHMCMLLI_00332	6.92e-31	-	-	-	-	-	-	-	-
PHMCMLLI_00333	7.41e-255	galM	5.1.3.3	-	G	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the interconversion of alpha and beta anomers of maltose
PHMCMLLI_00334	7.62e-97	-	-	-	-	-	-	-	-
PHMCMLLI_00335	1.1e-279	dacA	3.4.16.4	-	M	ko:K07258	ko00550,ko01100,map00550,map01100	ko00000,ko00001,ko01000,ko01002,ko01011	Belongs to the peptidase S11 family
PHMCMLLI_00336	5.58e-178	-	-	-	V	-	-	-	Beta-lactamase enzyme family
PHMCMLLI_00337	0.0	gtfA	2.4.1.7	GH13	G	ko:K00690	ko00500,map00500	ko00000,ko00001,ko01000	Sucrose glucosyltransferase
PHMCMLLI_00338	1.81e-274	-	-	-	EGP	-	-	-	Transporter, major facilitator family protein
PHMCMLLI_00339	0.0	arcT	-	-	E	-	-	-	Dipeptidase
PHMCMLLI_00340	0.0	arcD	-	-	S	-	-	-	C4-dicarboxylate anaerobic carrier
PHMCMLLI_00341	1.5e-227	ywbN	-	-	P	ko:K07223,ko:K16301	-	ko00000,ko01000,ko02000	Peroxidase
PHMCMLLI_00342	5.9e-216	yjcA	-	-	S	ko:K19350	ko02010,map02010	ko00000,ko00001,ko01504,ko02000	ABC transporter
PHMCMLLI_00343	4.84e-170	-	-	-	I	-	-	-	alpha/beta hydrolase fold
PHMCMLLI_00344	2.89e-230	-	-	-	S	-	-	-	Conserved hypothetical protein 698
PHMCMLLI_00345	3.16e-123	-	-	-	S	-	-	-	NADPH-dependent FMN reductase
PHMCMLLI_00346	3.23e-217	mccA	2.5.1.134, 2.5.1.47	-	E	ko:K01738,ko:K17216	ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the cysteine synthase cystathionine beta- synthase family
PHMCMLLI_00347	2.81e-230	hemH	4.99.1.1, 4.99.1.9	-	H	ko:K01772	ko00860,ko01100,ko01110,map00860,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the ferrous insertion into protoporphyrin IX
PHMCMLLI_00348	4.44e-292	mntH	-	-	P	ko:K03322	-	ko00000,ko02000	H( )-stimulated, divalent metal cation uptake system
PHMCMLLI_00349	4.79e-117	-	-	-	Q	-	-	-	Methyltransferase
PHMCMLLI_00350	3.26e-151	ktrA	-	-	P	ko:K03499	-	ko00000,ko02000	domain protein
PHMCMLLI_00351	1.37e-304	ktrB	-	-	P	ko:K03498	-	ko00000,ko02000	Potassium uptake protein
PHMCMLLI_00352	0.0	mycA	4.2.1.53	-	S	ko:K10254	-	ko00000,ko01000	Myosin-crossreactive antigen
PHMCMLLI_00353	4.47e-178	nfrA	1.5.1.38	-	C	ko:K19285	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	nitroreductase
PHMCMLLI_00354	2.13e-278	-	-	-	G	-	-	-	Glycosyl hydrolases family 8
PHMCMLLI_00355	8.29e-309	-	-	-	M	-	-	-	Glycosyl transferase
PHMCMLLI_00356	5.43e-196	-	-	-	-	-	-	-	-
PHMCMLLI_00357	3.02e-162	phoU	-	-	P	ko:K02039	-	ko00000	Plays a role in the regulation of phosphate uptake
PHMCMLLI_00358	3.14e-177	pstB	3.6.3.27	-	P	ko:K02036	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PHMCMLLI_00359	5.21e-197	pstA	-	-	P	ko:K02038	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Phosphate transport system permease protein PstA
PHMCMLLI_00360	4.58e-194	pstC	-	-	P	ko:K02037	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	probably responsible for the translocation of the substrate across the membrane
PHMCMLLI_00361	1.35e-202	pstS	-	-	P	ko:K02040	ko02010,ko02020,ko05152,map02010,map02020,map05152	ko00000,ko00001,ko00002,ko02000	Phosphate
PHMCMLLI_00362	6.61e-167	-	-	-	K	ko:K07658	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	Transcriptional regulatory protein, C-terminal domain protein
PHMCMLLI_00363	2.16e-154	-	-	-	P	ko:K02006	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
PHMCMLLI_00364	1.21e-128	-	-	-	P	ko:K02008	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Cobalt transport protein
PHMCMLLI_00365	1.67e-208	cbiM	-	-	P	ko:K02007	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	PDGLE domain
PHMCMLLI_00366	2.43e-95	-	-	-	U	-	-	-	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PHMCMLLI_00367	2e-56	-	-	-	U	-	-	-	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PHMCMLLI_00368	2.63e-206	ureD	-	-	O	ko:K03190	-	ko00000	Required for maturation of urease via the functional incorporation of the urease nickel metallocenter
PHMCMLLI_00369	1.4e-145	ureG	-	-	KO	ko:K03189	-	ko00000	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
PHMCMLLI_00370	2.4e-169	ureF	-	-	O	ko:K03188	-	ko00000	Required for maturation of urease via the functional incorporation of the urease nickel metallocenter
PHMCMLLI_00371	1.79e-101	ureE	-	-	O	ko:K03187	-	ko00000	Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly
PHMCMLLI_00372	0.0	ureC	3.5.1.5	-	E	ko:K01428	ko00220,ko00230,ko00791,ko01100,ko01120,ko05120,map00220,map00230,map00791,map01100,map01120,map05120	ko00000,ko00001,ko01000	Amidohydrolase family
PHMCMLLI_00373	1.15e-83	ureB	3.5.1.5	-	E	ko:K01429	ko00220,ko00230,ko00791,ko01100,ko01120,map00220,map00230,map00791,map01100,map01120	ko00000,ko00001,ko01000	Urease beta subunit
PHMCMLLI_00374	8.76e-63	ureA	3.5.1.5	-	E	ko:K01430	ko00220,ko00230,ko00791,ko01100,ko01120,map00220,map00230,map00791,map01100,map01120	ko00000,ko00001,ko01000	Urease, gamma subunit
PHMCMLLI_00375	3.07e-129	-	-	-	S	-	-	-	AmiS/UreI family transporter
PHMCMLLI_00376	6.22e-285	amt	-	-	P	ko:K03320	-	ko00000,ko02000	ammonium transporter
PHMCMLLI_00378	1.51e-234	-	-	-	-	-	-	-	-
PHMCMLLI_00379	2.32e-126	-	-	-	K	-	-	-	acetyltransferase
PHMCMLLI_00380	7.99e-141	brpA	-	-	K	-	-	-	Cell envelope-like function transcriptional attenuator common domain protein
PHMCMLLI_00381	2.58e-117	lysR5	-	-	K	-	-	-	LysR substrate binding domain
PHMCMLLI_00382	2.18e-182	manA	5.3.1.8	-	G	ko:K01809	ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	mannose-6-phosphate isomerase
PHMCMLLI_00383	1.2e-204	-	-	-	K	-	-	-	LysR substrate binding domain
PHMCMLLI_00384	2.25e-263	-	1.1.1.90	-	C	ko:K00055	ko00350,ko00360,ko00622,ko00623,ko01100,ko01120,ko01220,map00350,map00360,map00622,map00623,map01100,map01120,map01220	ko00000,ko00001,ko00002,ko01000	Zn-dependent alcohol dehydrogenases, class III
PHMCMLLI_00385	1.87e-84	-	-	-	L	ko:K07491	-	ko00000	Transposase IS200 like
PHMCMLLI_00386	1.32e-230	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
PHMCMLLI_00387	4.09e-67	ptpA	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
PHMCMLLI_00388	1.14e-220	-	-	-	-	-	-	-	-
PHMCMLLI_00389	4.8e-128	efp	-	-	J	ko:K02356	-	ko00000,ko03012	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
PHMCMLLI_00390	5.75e-232	-	-	-	S	ko:K07035	-	ko00000	Phosphotransferase system, EIIC
PHMCMLLI_00392	9.49e-67	-	-	-	-	-	-	-	-
PHMCMLLI_00393	5.05e-174	-	-	-	-	-	-	-	-
PHMCMLLI_00394	5.24e-194	-	-	-	G	-	-	-	Belongs to the phosphoglycerate mutase family
PHMCMLLI_00395	6.09e-162	nagB	3.5.99.6	-	G	ko:K02564	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
PHMCMLLI_00396	1.23e-134	-	-	-	D	ko:K04095	-	ko00000,ko03036	Fic/DOC family
PHMCMLLI_00397	3.69e-92	-	-	-	-	-	-	-	-
PHMCMLLI_00398	0.0	XK27_00340	3.1.3.5	-	F	ko:K01081	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the 5'-nucleotidase family
PHMCMLLI_00399	1.45e-135	-	-	-	L	-	-	-	nuclease
PHMCMLLI_00400	0.0	sbcC	-	-	L	ko:K03546	-	ko00000,ko03400	Putative exonuclease SbcCD, C subunit
PHMCMLLI_00401	2.45e-269	sbcD	-	-	L	ko:K03547	-	ko00000,ko03400	SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity
PHMCMLLI_00402	4.13e-227	-	-	-	M	-	-	-	Glycosyl hydrolases family 25
PHMCMLLI_00403	1.19e-184	ywqE	3.1.3.48	-	GM	ko:K01104	-	ko00000,ko01000	PHP domain protein
PHMCMLLI_00405	4.74e-51	-	-	-	-	ko:K18829	-	ko00000,ko02048	-
PHMCMLLI_00406	6.95e-89	-	-	-	T	ko:K07171	-	ko00000,ko01000,ko02048	Toxin-antitoxin system, toxin component, MazF family
PHMCMLLI_00408	0.0	ybgF	-	-	E	ko:K02205,ko:K03293,ko:K16235,ko:K16236	-	ko00000,ko02000	amino acid
PHMCMLLI_00409	1.08e-218	mmuM	2.1.1.10	-	H	ko:K00547	ko00270,ko01100,ko01110,map00270,map01100,map01110	ko00000,ko00001,ko01000	homocysteine S-methyltransferase
PHMCMLLI_00411	1.27e-64	-	-	-	S	-	-	-	Protein of unknown function (DUF4065)
PHMCMLLI_00413	5.82e-57	-	-	-	T	ko:K07171	-	ko00000,ko01000,ko02048	PemK-like, MazF-like toxin of type II toxin-antitoxin system
PHMCMLLI_00414	1.15e-34	-	-	-	-	-	-	-	-
PHMCMLLI_00416	1.07e-38	-	-	-	L	-	-	-	Reverse transcriptase (RNA-dependent DNA polymerase)
PHMCMLLI_00417	5.62e-224	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
PHMCMLLI_00418	1.83e-149	dedA	-	-	S	ko:K03975	-	ko00000	SNARE-like domain protein
PHMCMLLI_00419	2.33e-132	-	-	-	S	-	-	-	Protein of unknown function (DUF1461)
PHMCMLLI_00420	4.76e-170	nagD	3.1.3.41	-	G	ko:K01101	ko00627,ko01120,map00627,map01120	ko00000,ko00001,ko01000	Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
PHMCMLLI_00421	3.24e-121	yutD	-	-	S	-	-	-	Protein of unknown function (DUF1027)
PHMCMLLI_00422	3.75e-147	-	-	-	S	-	-	-	Calcineurin-like phosphoesterase
PHMCMLLI_00423	3.07e-283	ackA	2.7.2.1	-	F	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PHMCMLLI_00424	4.88e-184	ytxK	2.1.1.72	-	L	ko:K00571	-	ko00000,ko01000,ko02048	N-6 DNA Methylase
PHMCMLLI_00426	4.62e-92	-	-	-	-	ko:K02248	-	ko00000,ko00002,ko02044	-
PHMCMLLI_00427	2.38e-56	-	-	-	-	-	-	-	-
PHMCMLLI_00428	3.51e-101	-	-	-	NU	ko:K02246	-	ko00000,ko00002,ko02044	general secretion pathway protein
PHMCMLLI_00429	1.57e-42	comGC	-	-	U	ko:K02245	-	ko00000,ko00002,ko02044	competence protein ComGC
PHMCMLLI_00430	6.38e-235	comGB	-	-	NU	ko:K02244	-	ko00000,ko00002,ko02044	type II secretion system
PHMCMLLI_00431	6.63e-232	comGA	-	-	NU	ko:K02243	-	ko00000,ko00002,ko02044	Type II IV secretion system protein
PHMCMLLI_00432	1.22e-168	yebC	-	-	K	-	-	-	Transcriptional regulatory protein
PHMCMLLI_00433	2.43e-180	-	-	-	-	-	-	-	-
PHMCMLLI_00434	1.15e-233	ccpA	-	-	K	ko:K02529	-	ko00000,ko03000	catabolite control protein A
PHMCMLLI_00435	2.01e-268	pepQ	3.4.13.9	-	E	ko:K01271	-	ko00000,ko01000,ko01002	Creatinase/Prolidase N-terminal domain
PHMCMLLI_00436	1.84e-75	-	-	-	-	-	-	-	-
PHMCMLLI_00437	1.54e-71	ytxG	-	-	S	-	-	-	protein containing a divergent version of the methyl-accepting chemotaxis-like domain
PHMCMLLI_00438	6.23e-188	ykuT	-	-	M	ko:K16052,ko:K22044	-	ko00000,ko02000	mechanosensitive ion channel
PHMCMLLI_00439	1.91e-196	-	-	-	S	-	-	-	haloacid dehalogenase-like hydrolase
PHMCMLLI_00440	9.99e-98	ykuL	-	-	S	-	-	-	(CBS) domain
PHMCMLLI_00441	6.99e-122	-	-	-	S	ko:K07095	-	ko00000	Phosphoesterase
PHMCMLLI_00442	6.73e-131	rdgB	3.6.1.66	-	F	ko:K02428	ko00230,map00230	ko00000,ko00001,ko01000	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
PHMCMLLI_00443	1.43e-181	murI	3.6.1.66, 5.1.1.3	-	M	ko:K01776,ko:K02428	ko00230,ko00471,ko01100,map00230,map00471,map01100	ko00000,ko00001,ko01000,ko01011	Provides the (R)-glutamate required for cell wall biosynthesis
PHMCMLLI_00444	3.51e-125	yslB	-	-	S	-	-	-	Protein of unknown function (DUF2507)
PHMCMLLI_00445	2.86e-72	trxA	-	-	O	ko:K03671	ko04621,ko05418,map04621,map05418	ko00000,ko00001,ko03110	Belongs to the thioredoxin family
PHMCMLLI_00446	0.0	mutS2	-	-	L	ko:K07456	ko03430,map03430	ko00000,ko00001,ko03400	Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
PHMCMLLI_00447	7.15e-122	cvpA	-	-	S	-	-	-	Colicin V production protein
PHMCMLLI_00448	3.75e-63	yrzB	-	-	S	-	-	-	Belongs to the UPF0473 family
PHMCMLLI_00449	3.62e-100	yrrK	-	-	J	ko:K07447	-	ko00000,ko01000	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
PHMCMLLI_00450	8.03e-58	yrzL	-	-	S	-	-	-	Belongs to the UPF0297 family
PHMCMLLI_00451	0.0	alaS	6.1.1.7	-	J	ko:K01872	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
PHMCMLLI_00452	0.0	cshB	3.6.4.13	-	JKL	ko:K05592,ko:K18692	ko03018,map03018	ko00000,ko00001,ko01000,ko03009,ko03019	DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
PHMCMLLI_00453	6.15e-234	nrnA	3.1.13.3, 3.1.3.7	-	S	ko:K06881	ko00920,ko01100,ko01120,map00920,map01100,map01120	ko00000,ko00001,ko01000,ko03400	DHHA1 domain protein
PHMCMLLI_00454	7.54e-62	yajC	-	-	U	ko:K03210	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Preprotein translocase
PHMCMLLI_00455	6.18e-242	tgt	2.4.2.29	-	F	ko:K00773	-	ko00000,ko01000,ko03016	Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
PHMCMLLI_00456	2.86e-244	ruvB	3.6.4.12	-	L	ko:K03551	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
PHMCMLLI_00457	1.84e-132	ruvA	3.6.4.12	-	L	ko:K03550	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
PHMCMLLI_00458	0.0	mutL	-	-	L	ko:K03572	ko03430,map03430	ko00000,ko00001,ko03400	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
PHMCMLLI_00459	0.0	mutS	-	-	L	ko:K03555	ko03430,map03430	ko00000,ko00001,ko03400	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
PHMCMLLI_00460	2.29e-276	rny	-	-	S	ko:K18682	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	Endoribonuclease that initiates mRNA decay
PHMCMLLI_00461	7.67e-252	recA	-	-	L	ko:K03553	ko03440,map03440	ko00000,ko00001,ko00002,ko03400	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
PHMCMLLI_00462	2.13e-294	cinA	3.5.1.42	-	S	ko:K03742,ko:K03743	ko00760,map00760	ko00000,ko00001,ko01000	Belongs to the CinA family
PHMCMLLI_00463	1.16e-133	pgsA	2.7.8.5	-	I	ko:K00995	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
PHMCMLLI_00464	1.37e-202	-	-	-	S	-	-	-	Helix-turn-helix domain
PHMCMLLI_00465	9.62e-317	ymfH	-	-	S	-	-	-	Peptidase M16
PHMCMLLI_00466	2.48e-293	ymfF	-	-	S	-	-	-	Peptidase M16 inactive domain protein
PHMCMLLI_00467	9.52e-204	aatB	-	-	ET	ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter substrate-binding protein
PHMCMLLI_00468	2.93e-151	glnQ	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
PHMCMLLI_00469	3.13e-141	yecS_2	-	-	P	ko:K02029,ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter permease
PHMCMLLI_00470	1.69e-120	mreD	-	-	M	ko:K03571	-	ko00000,ko03036	rod shape-determining protein MreD
PHMCMLLI_00471	7.72e-195	mreC	-	-	M	ko:K03570	-	ko00000,ko03036	Involved in formation and maintenance of cell shape
PHMCMLLI_00472	8.33e-230	mreB	-	-	D	ko:K03569	-	ko00000,ko02048,ko03036,ko04812	cell shape determining protein MreB
PHMCMLLI_00473	6.98e-156	radC	-	-	L	ko:K03630	-	ko00000	DNA repair protein
PHMCMLLI_00474	5.85e-310	folC	6.3.2.12, 6.3.2.17	-	H	ko:K11754	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the folylpolyglutamate synthase family
PHMCMLLI_00475	3.66e-294	yumB	1.6.99.3	-	C	ko:K03885	ko00190,map00190	ko00000,ko00001,ko01000	NADH dehydrogenase
PHMCMLLI_00476	0.0	cydD	-	-	CO	ko:K16012	ko02010,map02010	ko00000,ko00001,ko02000	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
PHMCMLLI_00477	0.0	cydC	-	-	CO	ko:K16013	ko02010,map02010	ko00000,ko00001,ko02000	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
PHMCMLLI_00478	1.15e-234	cydB	1.10.3.14	-	C	ko:K00426	ko00190,ko01100,ko02020,map00190,map01100,map02020	ko00000,ko00001,ko00002,ko01000	Cytochrome d ubiquinol oxidase subunit II
PHMCMLLI_00479	0.0	cydA	1.10.3.14	-	C	ko:K00425	ko00190,ko01100,ko02020,map00190,map01100,map02020	ko00000,ko00001,ko00002,ko01000	ubiquinol oxidase
PHMCMLLI_00480	0.0	valS	6.1.1.9	-	J	ko:K01873	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
PHMCMLLI_00481	3.37e-291	thiI	2.8.1.4	-	H	ko:K03151	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko03016	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
PHMCMLLI_00482	8.29e-273	iscS2	2.8.1.7	-	E	ko:K04487	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko02048,ko03016,ko03029	Aminotransferase class V
PHMCMLLI_00483	0.0	ezrA	-	-	D	ko:K06286	-	ko00000,ko03036	modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
PHMCMLLI_00484	5.96e-139	rpsD	-	-	J	ko:K02986	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
PHMCMLLI_00485	3.64e-300	pbuG	-	-	S	ko:K06901	-	ko00000,ko02000	permease
PHMCMLLI_00486	0.0	frc	2.8.3.16	-	C	ko:K07749	-	ko00000,ko01000	Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
PHMCMLLI_00487	0.0	spxB	1.2.3.3, 1.2.5.1, 2.2.1.6, 4.1.1.8	-	EH	ko:K00156,ko:K00158,ko:K01577,ko:K01652	ko00290,ko00620,ko00630,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00620,map00630,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the TPP enzyme family
PHMCMLLI_00488	2.06e-181	-	-	-	S	ko:K09861	-	ko00000	Belongs to the UPF0246 family
PHMCMLLI_00489	4.16e-180	-	-	-	S	-	-	-	Membrane
PHMCMLLI_00490	2e-98	-	4.4.1.5	-	E	ko:K01759	ko00620,map00620	ko00000,ko00001,ko01000	Glyoxalase
PHMCMLLI_00491	9.79e-29	-	-	-	-	-	-	-	-
PHMCMLLI_00492	4.1e-111	XK27_05190	-	-	S	-	-	-	Protein of unknown function (DUF1694)
PHMCMLLI_00493	6.57e-310	rarA	-	-	L	ko:K07478	-	ko00000	recombination factor protein RarA
PHMCMLLI_00494	3.61e-61	-	-	-	-	-	-	-	-
PHMCMLLI_00495	1.95e-109	uspA	-	-	T	-	-	-	universal stress protein
PHMCMLLI_00496	1.82e-191	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
PHMCMLLI_00497	6.32e-275	ddl	6.3.2.4	-	F	ko:K01921	ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Belongs to the D-alanine--D-alanine ligase family
PHMCMLLI_00498	8.55e-64	gcsH2	-	-	E	ko:K02437	ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200	ko00000,ko00001,ko00002	glycine cleavage
PHMCMLLI_00499	9.49e-282	rodA	-	-	D	ko:K05837	-	ko00000,ko03036	Belongs to the SEDS family
PHMCMLLI_00500	4.61e-44	-	-	-	S	-	-	-	Protein of unknown function (DUF2969)
PHMCMLLI_00501	2.57e-227	mbl	-	-	D	ko:K03569	-	ko00000,ko02048,ko03036,ko04812	Cell shape determining protein MreB Mrl
PHMCMLLI_00502	1.28e-309	murA	2.5.1.7	-	M	ko:K00790	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PHMCMLLI_00503	1.76e-45	ywzB	-	-	S	-	-	-	Protein of unknown function (DUF1146)
PHMCMLLI_00504	8.95e-90	atpC	-	-	C	ko:K02114	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Produces ATP from ADP in the presence of a proton gradient across the membrane
PHMCMLLI_00505	0.0	atpD	3.6.3.14	-	C	ko:K02112	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko01000	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
PHMCMLLI_00506	1.3e-212	atpG	-	-	C	ko:K02115	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
PHMCMLLI_00507	0.0	atpA	3.6.3.14	-	C	ko:K02111	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko01000	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
PHMCMLLI_00508	6.84e-121	atpH	-	-	C	ko:K02113	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PHMCMLLI_00509	1.07e-95	atpF	-	-	C	ko:K02109	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
PHMCMLLI_00510	1.26e-29	atpE	-	-	C	ko:K02110	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PHMCMLLI_00511	4.63e-162	atpB	-	-	C	ko:K02108	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko03110	it plays a direct role in the translocation of protons across the membrane
PHMCMLLI_00512	2.8e-294	pyrP	-	-	F	ko:K02824	-	ko00000,ko02000	Permease
PHMCMLLI_00513	6.99e-168	yibF	-	-	S	-	-	-	overlaps another CDS with the same product name
PHMCMLLI_00514	2.73e-245	yibE	-	-	S	-	-	-	overlaps another CDS with the same product name
PHMCMLLI_00515	0.0	ptsI	2.7.3.9	-	G	ko:K08483	ko02060,map02060	ko00000,ko00001,ko01000,ko02000	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
PHMCMLLI_00516	6.68e-150	upp	2.4.2.9	-	F	ko:K00761	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
PHMCMLLI_00517	2.47e-291	glyA	2.1.2.1	-	E	ko:K00600	ko00260,ko00460,ko00630,ko00670,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko01523,map00260,map00460,map00630,map00670,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map01523	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
PHMCMLLI_00518	6.56e-252	ywlC	2.7.7.87	-	J	ko:K07566	-	ko00000,ko01000,ko03009,ko03016	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
PHMCMLLI_00519	4.42e-216	prmC	2.1.1.297	-	J	ko:K02493	-	ko00000,ko01000,ko03012	Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
PHMCMLLI_00520	1.73e-248	prfA	-	-	J	ko:K02835	-	ko00000,ko03012	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
PHMCMLLI_00521	6.8e-140	tdk	2.7.1.21	-	F	ko:K00857	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	thymidine kinase
PHMCMLLI_00522	0.0	murE2	6.3.2.13	-	M	ko:K01928	ko00300,ko00550,map00300,map00550	ko00000,ko00001,ko01000,ko01011	Mur ligase, middle domain
PHMCMLLI_00523	6.91e-173	-	-	-	S	ko:K07009	-	ko00000	CobB/CobQ-like glutamine amidotransferase domain
PHMCMLLI_00524	1.39e-297	potE	-	-	U	ko:K03756,ko:K03758	-	ko00000,ko02000	Amino acid permease
PHMCMLLI_00525	0.0	arcD	-	-	E	ko:K03758	-	ko00000,ko02000	Arginine ornithine antiporter
PHMCMLLI_00526	6.17e-104	argR	-	-	K	ko:K03402	-	ko00000,ko03000	Regulates arginine biosynthesis genes
PHMCMLLI_00527	6.94e-302	arcA	3.5.3.6	-	E	ko:K01478	ko00220,ko01100,ko01110,ko01130,map00220,map01100,map01110,map01130	ko00000,ko00001,ko01000	Arginine
PHMCMLLI_00528	1.37e-247	ampC	-	-	V	-	-	-	Beta-lactamase
PHMCMLLI_00529	1.22e-77	-	-	-	-	-	-	-	-
PHMCMLLI_00530	0.0	-	-	-	M	-	-	-	domain protein
PHMCMLLI_00531	1.08e-131	-	-	-	-	-	-	-	-
PHMCMLLI_00532	1.08e-268	-	-	-	EGP	-	-	-	Major Facilitator Superfamily
PHMCMLLI_00533	5.74e-301	-	-	-	-	-	-	-	-
PHMCMLLI_00534	2.17e-107	-	-	-	K	-	-	-	Transcriptional regulator, HxlR family
PHMCMLLI_00535	5.75e-141	XK27_02070	-	-	S	ko:K07078	-	ko00000	Nitroreductase family
PHMCMLLI_00536	6.47e-68	ydeP	-	-	K	-	-	-	Transcriptional regulator, HxlR family
PHMCMLLI_00537	6.67e-158	-	-	-	GM	-	-	-	NmrA-like family
PHMCMLLI_00538	5.38e-101	-	-	-	S	ko:K02348	-	ko00000	Gnat family
PHMCMLLI_00539	2.3e-52	-	-	-	S	-	-	-	Cytochrome B5
PHMCMLLI_00540	8.47e-08	-	-	-	S	-	-	-	Cytochrome B5
PHMCMLLI_00541	5.47e-55	-	-	-	S	-	-	-	Cytochrome B5
PHMCMLLI_00542	1e-271	-	2.1.1.14	-	E	ko:K00549	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	methionine synthase, vitamin-B12 independent
PHMCMLLI_00544	5.69e-234	panE	1.1.1.169	-	H	ko:K00077	ko00770,ko01100,ko01110,map00770,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
PHMCMLLI_00545	9.08e-317	-	-	-	E	ko:K03294	-	ko00000	amino acid
PHMCMLLI_00546	0.0	npp	-	-	S	-	-	-	type I phosphodiesterase nucleotide pyrophosphatase
PHMCMLLI_00547	7.67e-292	yxiO	-	-	S	ko:K06902	ko04138,map04138	ko00000,ko00001,ko02000,ko04131	Vacuole effluxer Atg22 like
PHMCMLLI_00549	0.0	thrS	6.1.1.3	-	J	ko:K01868	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
PHMCMLLI_00550	7.69e-77	-	-	-	-	-	-	-	-
PHMCMLLI_00551	0.0	mntH	-	-	P	ko:K03322	-	ko00000,ko02000	H( )-stimulated, divalent metal cation uptake system
PHMCMLLI_00552	7.01e-244	-	-	-	E	-	-	-	Zinc-binding dehydrogenase
PHMCMLLI_00553	1.04e-289	pimB	2.4.1.337	GT4	M	ko:K19002	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000,ko01003	Glycosyltransferase, group 1 family protein
PHMCMLLI_00554	4.82e-254	cpoA	2.4.1.208	GT4	M	ko:K13677,ko:K13678	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000,ko01003	Glycosyltransferase, group 1 family protein
PHMCMLLI_00555	1.32e-228	mprF	-	-	I	ko:K07027	-	ko00000,ko02000	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
PHMCMLLI_00557	2.36e-65	yrvD	-	-	S	-	-	-	Pfam:DUF1049
PHMCMLLI_00558	1.44e-57	-	3.1.3.102, 3.1.3.104	-	S	ko:K20861	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	hydrolase
PHMCMLLI_00559	9.35e-116	ntd	2.4.2.6	-	F	ko:K08728	ko00240,map00240	ko00000,ko00001,ko01000	Nucleoside
PHMCMLLI_00560	2.82e-26	-	-	-	-	-	-	-	-
PHMCMLLI_00561	5.99e-209	-	-	-	S	-	-	-	Alpha/beta hydrolase of unknown function (DUF915)
PHMCMLLI_00562	1.7e-148	-	-	-	S	-	-	-	Protein of unknown function (DUF421)
PHMCMLLI_00563	3.21e-94	-	-	-	S	-	-	-	Protein of unknown function (DUF3290)
PHMCMLLI_00564	7.11e-57	-	-	-	S	ko:K09790	-	ko00000	Protein of unknown function (DUF454)
PHMCMLLI_00565	0.0	-	-	-	I	-	-	-	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PHMCMLLI_00566	4.02e-201	endA	-	-	V	ko:K15051	-	ko00000	DNA/RNA non-specific endonuclease
PHMCMLLI_00567	0.0	yifK	-	-	E	ko:K03293	-	ko00000	Amino acid permease
PHMCMLLI_00569	0.0	dxs	2.2.1.7	-	H	ko:K01662	ko00730,ko00900,ko01100,ko01110,ko01130,map00730,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
PHMCMLLI_00570	4.26e-290	-	-	-	N	ko:K09384	-	ko00000	Uncharacterized conserved protein (DUF2075)
PHMCMLLI_00571	5.85e-158	-	-	-	S	-	-	-	SNARE associated Golgi protein
PHMCMLLI_00572	0.0	uvrA2	-	-	L	ko:K03701	ko03420,map03420	ko00000,ko00001,ko03400	excinuclease ABC, A subunit
PHMCMLLI_00573	5.16e-72	crcB	-	-	U	ko:K06199	-	ko00000,ko02000	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PHMCMLLI_00574	7.22e-76	crcB	-	-	D	ko:K06199	-	ko00000,ko02000	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PHMCMLLI_00575	3.39e-90	-	-	-	E	-	-	-	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PHMCMLLI_00576	3.66e-186	-	-	-	S	-	-	-	DUF218 domain
PHMCMLLI_00577	0.0	ubiB	-	-	S	ko:K03688	-	ko00000	ABC1 family
PHMCMLLI_00578	9.18e-317	yhdP	-	-	S	-	-	-	Transporter associated domain
PHMCMLLI_00579	1.14e-96	atkY	-	-	K	ko:K02171	ko01501,map01501	ko00000,ko00001,ko00002,ko01504,ko03000	Copper transport repressor CopY TcrY
PHMCMLLI_00580	2.04e-309	-	-	-	U	-	-	-	Belongs to the major facilitator superfamily
PHMCMLLI_00581	6.68e-98	-	-	-	S	-	-	-	UPF0756 membrane protein
PHMCMLLI_00582	1.06e-104	-	-	-	S	-	-	-	Cupin domain
PHMCMLLI_00583	1.18e-108	-	-	-	C	-	-	-	Flavodoxin
PHMCMLLI_00584	6.96e-207	rlrB	-	-	K	-	-	-	LysR substrate binding domain protein
PHMCMLLI_00585	4.54e-214	yvgN	-	-	C	-	-	-	Aldo keto reductase
PHMCMLLI_00586	1.02e-51	XK27_08630	-	-	T	ko:K07166	-	ko00000	Belongs to the UPF0237 family
PHMCMLLI_00587	3.82e-311	XK27_08635	-	-	S	ko:K09157	-	ko00000	UPF0210 protein
PHMCMLLI_00588	9.11e-123	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
PHMCMLLI_00589	5.98e-206	-	-	-	S	-	-	-	Alpha beta hydrolase
PHMCMLLI_00590	4.19e-202	gspA	-	-	M	-	-	-	family 8
PHMCMLLI_00591	2.57e-291	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
PHMCMLLI_00592	7.28e-101	-	-	-	L	ko:K07491	-	ko00000	Transposase IS200 like
PHMCMLLI_00593	9.78e-151	yagB	-	-	S	ko:K06950	-	ko00000	Metal dependent phosphohydrolases with conserved 'HD' motif.
PHMCMLLI_00594	3.05e-123	-	-	-	-	-	-	-	-
PHMCMLLI_00595	6.96e-206	-	-	-	S	-	-	-	EDD domain protein, DegV family
PHMCMLLI_00596	0.0	FbpA	-	-	K	-	-	-	Fibronectin-binding protein
PHMCMLLI_00597	0.0	carB	6.3.5.5	-	F	ko:K01955	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthase
PHMCMLLI_00598	3.19e-264	carA	6.3.5.5	-	F	ko:K01956	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the CarA family
PHMCMLLI_00599	2.9e-224	rluD	5.4.99.23	-	J	ko:K06180	-	ko00000,ko01000,ko03009	Responsible for synthesis of pseudouridine from uracil
PHMCMLLI_00600	4.21e-95	lspA	3.4.23.36	-	MU	ko:K03101	ko03060,map03060	ko00000,ko00001,ko01000,ko01002	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
PHMCMLLI_00601	2.58e-85	esbA	-	-	S	-	-	-	Family of unknown function (DUF5322)
PHMCMLLI_00602	8.95e-91	rnhA	3.1.26.4	-	L	ko:K03469	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Ribonuclease HI
PHMCMLLI_00603	1.03e-283	ypsC	-	-	L	ko:K07444	-	ko00000,ko01000	Belongs to the methyltransferase superfamily
PHMCMLLI_00604	4.13e-109	-	-	-	F	ko:K03647	-	ko00000	Belongs to the NrdI family
PHMCMLLI_00605	2.53e-251	-	-	-	L	-	-	-	Transposase
PHMCMLLI_00606	1.06e-281	-	-	-	L	ko:K07487	-	ko00000	Transposase
PHMCMLLI_00607	2.29e-74	czrA	-	-	K	ko:K22043	-	ko00000,ko03000	Transcriptional regulator, ArsR family
PHMCMLLI_00608	3.2e-118	-	-	-	P	-	-	-	Cadmium resistance transporter
PHMCMLLI_00609	1.14e-176	XK27_08845	-	-	S	ko:K05833	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PHMCMLLI_00610	1.18e-196	XK27_08840	-	-	U	ko:K05832	-	ko00000,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
PHMCMLLI_00611	7.76e-234	ABC-SBP	-	-	S	ko:K01989	-	ko00000,ko00002,ko02000	ABC transporter
PHMCMLLI_00612	5.44e-172	-	-	-	M	-	-	-	PFAM NLP P60 protein
PHMCMLLI_00616	0.0	-	-	-	S	-	-	-	ABC transporter, ATP-binding protein
PHMCMLLI_00617	1.97e-184	-	-	-	S	-	-	-	Putative ABC-transporter type IV
PHMCMLLI_00618	1.03e-137	-	-	-	NU	-	-	-	mannosyl-glycoprotein
PHMCMLLI_00619	9.02e-317	brnQ	-	-	U	ko:K03311	-	ko00000	Component of the transport system for branched-chain amino acids
PHMCMLLI_00620	3.28e-296	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2325)
PHMCMLLI_00621	3.72e-262	yngD	-	-	S	ko:K07097	-	ko00000	DHHA1 domain
PHMCMLLI_00622	3.53e-66	-	-	-	-	-	-	-	-
PHMCMLLI_00623	2.04e-174	-	2.1.1.72	-	D	ko:K03427	-	ko00000,ko01000,ko02048	peptidase
PHMCMLLI_00625	3.32e-72	-	-	-	-	-	-	-	-
PHMCMLLI_00626	5.83e-152	yrkL	-	-	S	-	-	-	Flavodoxin-like fold
PHMCMLLI_00628	1.92e-86	yeaO	-	-	S	-	-	-	Protein of unknown function, DUF488
PHMCMLLI_00629	2.34e-154	yxlJ	3.2.2.21	-	L	ko:K03652	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Belongs to the DNA glycosylase MPG family
PHMCMLLI_00630	1.7e-260	-	-	-	S	-	-	-	associated with various cellular activities
PHMCMLLI_00631	6.82e-310	-	-	-	S	-	-	-	Putative metallopeptidase domain
PHMCMLLI_00632	2.1e-64	-	-	-	-	-	-	-	-
PHMCMLLI_00633	0.0	pepO	-	-	O	ko:K07386	-	ko00000,ko01000,ko01002	Peptidase family M13
PHMCMLLI_00634	2.02e-133	-	-	-	K	-	-	-	Helix-turn-helix domain
PHMCMLLI_00635	5.82e-114	ymdB	-	-	S	-	-	-	Macro domain protein
PHMCMLLI_00636	2.45e-251	-	-	-	EGP	-	-	-	Major Facilitator
PHMCMLLI_00637	0.0	cls	-	-	I	ko:K06131	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PHMCMLLI_00638	0.0	-	-	-	L	-	-	-	PFAM transposase, IS4 family protein
PHMCMLLI_00639	1.06e-281	-	-	-	L	ko:K07487	-	ko00000	Transposase
PHMCMLLI_00640	1.37e-218	whiA	-	-	K	ko:K09762	-	ko00000	May be required for sporulation
PHMCMLLI_00641	1.41e-239	yvcK	-	-	S	-	-	-	Required for morphogenesis under gluconeogenic growth conditions
PHMCMLLI_00642	8.05e-208	yvcJ	-	-	S	ko:K06958	-	ko00000,ko03019	Displays ATPase and GTPase activities
PHMCMLLI_00643	9.18e-317	steT	-	-	E	ko:K03294	-	ko00000	amino acid
PHMCMLLI_00644	0.0	uvrA	-	-	L	ko:K03701	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
PHMCMLLI_00645	0.0	uvrB	-	-	L	ko:K03702	ko03420,map03420	ko00000,ko00001,ko03400	damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
PHMCMLLI_00646	2.12e-19	-	-	-	-	-	-	-	-
PHMCMLLI_00647	3.57e-150	yfbR	-	-	S	ko:K07023	-	ko00000	HD containing hydrolase-like enzyme
PHMCMLLI_00648	0.0	pgm	5.4.2.2	-	G	ko:K01835	ko00010,ko00030,ko00052,ko00230,ko00500,ko00520,ko00521,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00052,map00230,map00500,map00520,map00521,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
PHMCMLLI_00649	9.93e-115	ykhA	3.1.2.20	-	I	ko:K01073	-	ko00000,ko01000	Thioesterase superfamily
PHMCMLLI_00650	2e-206	-	-	-	ET	ko:K02030	-	ko00000,ko00002,ko02000	PFAM extracellular solute-binding protein, family 3
PHMCMLLI_00651	1.67e-271	-	3.5.1.18	-	E	ko:K01439	ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000	succinyl-diaminopimelate desuccinylase
PHMCMLLI_00652	2.38e-222	trxB	1.8.1.9	-	C	ko:K00384	ko00450,map00450	ko00000,ko00001,ko01000	Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
PHMCMLLI_00653	6.21e-203	lutA	-	-	C	ko:K18928	-	ko00000	Cysteine-rich domain
PHMCMLLI_00654	0.0	lutB	-	-	C	ko:K18929	-	ko00000	4Fe-4S dicluster domain
PHMCMLLI_00655	1.76e-175	lutC	-	-	S	ko:K00782	-	ko00000	LUD domain
PHMCMLLI_00656	1.08e-215	galU	2.7.7.9	-	M	ko:K00963	ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	UTP-glucose-1-phosphate uridylyltransferase
PHMCMLLI_00657	5.68e-235	gpsA	1.1.1.94	-	I	ko:K00057	ko00564,ko01110,map00564,map01110	ko00000,ko00001,ko01000	Glycerol-3-phosphate dehydrogenase
PHMCMLLI_00658	1.16e-200	lgt	-	-	M	ko:K13292	-	ko00000,ko01000	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
PHMCMLLI_00659	1.38e-226	hprK	-	-	F	ko:K06023	-	ko00000,ko01000	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
PHMCMLLI_00660	1.88e-68	yvlD	-	-	S	ko:K08972	-	ko00000	Mycobacterial 4 TMS phage holin, superfamily IV
PHMCMLLI_00661	3.65e-67	-	-	-	KT	ko:K03973	-	ko00000,ko02048,ko03000	PspC domain protein
PHMCMLLI_00662	1.58e-238	prfB	-	-	J	ko:K02836	-	ko00000,ko03012	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
PHMCMLLI_00663	0.0	secA	-	-	U	ko:K03070	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
PHMCMLLI_00664	1.13e-120	hpf	-	-	J	ko:K05808	-	ko00000,ko03009	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
PHMCMLLI_00665	2.13e-158	comFC	-	-	S	ko:K02242	-	ko00000,ko00002,ko02044	Competence protein
PHMCMLLI_00666	0.0	comFA	-	-	L	ko:K02240	-	ko00000,ko00002,ko02044	Helicase C-terminal domain protein
PHMCMLLI_00667	1.06e-141	yvyE	3.4.13.9	-	S	ko:K01271	-	ko00000,ko01000,ko01002	YigZ family
PHMCMLLI_00668	9.26e-33	-	-	-	K	-	-	-	HxlR-like helix-turn-helix
PHMCMLLI_00669	3.45e-47	-	-	-	C	-	-	-	Nitroreductase family
PHMCMLLI_00670	1.51e-299	-	-	-	EGP	-	-	-	Major Facilitator
PHMCMLLI_00671	3.07e-89	-	-	-	K	-	-	-	Transcriptional regulator
PHMCMLLI_00672	2.63e-53	-	-	-	-	-	-	-	-
PHMCMLLI_00673	0.0	ydaO	-	-	E	-	-	-	amino acid
PHMCMLLI_00674	0.0	-	-	-	E	-	-	-	amino acid
PHMCMLLI_00675	3.5e-112	-	-	-	S	ko:K19055	-	ko00000,ko01000,ko03016	Aminoacyl-tRNA editing domain
PHMCMLLI_00676	0.0	groL	-	-	O	ko:K04077	ko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
PHMCMLLI_00677	1.83e-59	groS	-	-	O	ko:K04078	-	ko00000,ko03029,ko03110	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
PHMCMLLI_00679	4.67e-147	rex	-	-	K	ko:K01926	-	ko00000,ko03000	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
PHMCMLLI_00680	0.0	ydiF	-	-	S	ko:K06158	-	ko00000,ko03012	ABC transporter, ATP-binding protein
PHMCMLLI_00681	3.99e-231	ykpB	1.1.1.169	-	H	ko:K00077	ko00770,ko01100,ko01110,map00770,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
PHMCMLLI_00682	3.61e-288	mtnE	-	-	E	ko:K08969	ko00270,ko01100,map00270,map01100	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase
PHMCMLLI_00683	6.34e-182	mtnU	3.5.1.3	-	S	ko:K13566	ko00250,map00250	ko00000,ko00001,ko01000	Carbon-nitrogen hydrolase
PHMCMLLI_00684	8.57e-176	proB	2.7.2.11	-	F	ko:K00931	ko00330,ko00332,ko01100,ko01130,ko01230,map00330,map00332,map01100,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
PHMCMLLI_00685	1.48e-289	proA	1.2.1.41	-	E	ko:K00147	ko00330,ko00332,ko01100,ko01110,ko01130,ko01230,map00330,map00332,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
PHMCMLLI_00686	6.25e-171	proC	1.5.1.2	-	E	ko:K00286	ko00330,ko01100,ko01110,ko01130,ko01230,map00330,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
PHMCMLLI_00687	1.01e-251	tsaD	2.3.1.234	-	J	ko:K01409	-	ko00000,ko01000,ko03016	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
PHMCMLLI_00688	1.01e-133	rimI	2.3.1.128	-	K	ko:K03789	-	ko00000,ko01000,ko03009	Ribosomal-protein-alanine acetyltransferase
PHMCMLLI_00689	7.98e-166	yeaZ	2.3.1.234	-	O	ko:K01409,ko:K14742	-	ko00000,ko01000,ko03016	Universal bacterial protein YeaZ
PHMCMLLI_00690	1.48e-247	galE	5.1.3.2	-	M	ko:K01784	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the NAD(P)-dependent epimerase dehydratase family
PHMCMLLI_00691	5.83e-225	ppx	3.6.1.11, 3.6.1.40	-	FP	ko:K01524	ko00230,map00230	ko00000,ko00001,ko01000	exopolyphosphatase
PHMCMLLI_00692	0.0	ppk	2.7.4.1	-	P	ko:K00937	ko00190,ko03018,map00190,map03018	ko00000,ko00001,ko01000,ko03019	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
PHMCMLLI_00693	0.0	ppx3	3.6.1.11, 3.6.1.40	-	FP	ko:K01524	ko00230,map00230	ko00000,ko00001,ko01000	exopolyphosphatase
PHMCMLLI_00694	9.65e-272	-	5.4.2.7	-	G	ko:K01839	ko00030,ko00230,map00030,map00230	ko00000,ko00001,ko01000	Phosphotransfer between the C1 and C5 carbon atoms of pentose
PHMCMLLI_00695	0.0	cadA	-	-	P	-	-	-	P-type ATPase
PHMCMLLI_00696	1.6e-162	XK27_08875	-	-	O	-	-	-	PFAM peptidase M10A and M12B, matrixin and adamalysin
PHMCMLLI_00697	9.39e-166	-	-	-	-	-	-	-	-
PHMCMLLI_00698	2.73e-71	-	-	-	S	-	-	-	Sugar efflux transporter for intercellular exchange
PHMCMLLI_00699	9.45e-314	-	1.8.1.7	-	C	ko:K00383,ko:K21739	ko00480,ko04918,map00480,map04918	ko00000,ko00001,ko01000	Pyridine nucleotide-disulfide oxidoreductase
PHMCMLLI_00701	0.0	-	-	-	L	-	-	-	Helicase C-terminal domain protein
PHMCMLLI_00702	2.64e-109	-	3.6.1.27	-	I	ko:K19302	ko00550,map00550	ko00000,ko00001,ko01000,ko01011	PAP2 superfamily
PHMCMLLI_00703	5.65e-229	ydhF	-	-	S	-	-	-	Aldo keto reductase
PHMCMLLI_00705	1.44e-180	tpiA	5.3.1.1	-	G	ko:K01803	ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
PHMCMLLI_00706	6.25e-83	psiE	-	-	S	ko:K13256	-	ko00000	Phosphate-starvation-inducible E
PHMCMLLI_00707	1.34e-127	-	-	-	S	ko:K07002	-	ko00000	Serine hydrolase
PHMCMLLI_00709	9.76e-233	yeaB	-	-	P	-	-	-	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
PHMCMLLI_00710	0.0	nhaC	-	-	C	ko:K03315	-	ko00000,ko02000	Na H antiporter NhaC
PHMCMLLI_00711	2.3e-52	-	-	-	S	-	-	-	Cytochrome b5-like Heme/Steroid binding domain
PHMCMLLI_00712	1.63e-148	-	-	-	S	ko:K07118	-	ko00000	NAD(P)H-binding
PHMCMLLI_00713	3.88e-50	-	-	-	-	-	-	-	-
PHMCMLLI_00714	3.65e-169	-	-	-	IQ	-	-	-	dehydrogenase reductase
PHMCMLLI_00715	3.62e-180	-	-	-	EGP	-	-	-	MFS transporter, metabolite H symporter (MHS) family protein
PHMCMLLI_00716	5.03e-90	-	-	-	EGP	-	-	-	MFS transporter, metabolite H symporter (MHS) family protein
PHMCMLLI_00717	1.14e-113	-	-	-	-	-	-	-	-
PHMCMLLI_00735	0.0	xylT	-	-	EGP	-	-	-	Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family
PHMCMLLI_00736	3.65e-222	rhaS2	-	-	K	-	-	-	Transcriptional regulator, AraC family
PHMCMLLI_00737	0.0	-	-	-	G	ko:K03292	-	ko00000	MFS/sugar transport protein
PHMCMLLI_00738	0.0	-	-	-	G	-	-	-	Right handed beta helix region
PHMCMLLI_00739	1.04e-168	-	-	-	GK	-	-	-	ROK family
PHMCMLLI_00740	7.5e-301	xynP	-	-	G	ko:K03292	-	ko00000	MFS/sugar transport protein
PHMCMLLI_00741	0.0	yicI	3.2.1.177	GH31	G	ko:K01811	-	ko00000,ko01000	Belongs to the glycosyl hydrolase 31 family
PHMCMLLI_00742	0.0	xylA	5.3.1.5	-	G	ko:K01805	ko00040,ko00051,ko01100,map00040,map00051,map01100	ko00000,ko00001,ko01000	Belongs to the xylose isomerase family
PHMCMLLI_00743	0.0	xylB	2.7.1.17, 2.7.1.53	-	G	ko:K00854,ko:K00880	ko00040,ko00053,ko01100,map00040,map00053,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the FGGY kinase family
PHMCMLLI_00744	0.0	-	3.2.1.21, 3.2.1.52	GH3	G	ko:K01207,ko:K05349	ko00460,ko00500,ko00520,ko00531,ko00940,ko01100,ko01110,ko01501,map00460,map00500,map00520,map00531,map00940,map01100,map01110,map01501	ko00000,ko00001,ko00002,ko01000	hydrolase, family 3
PHMCMLLI_00745	2.15e-198	-	-	-	KT	ko:K07719	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	YcbB domain
PHMCMLLI_00746	9.21e-244	argF	2.1.3.3	-	E	ko:K00611	ko00220,ko01100,ko01110,ko01130,ko01230,map00220,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
PHMCMLLI_00747	1.32e-219	arcC	2.7.2.2	-	E	ko:K00926	ko00220,ko00230,ko00910,ko01100,ko01120,ko01200,map00220,map00230,map00910,map01100,map01120,map01200	ko00000,ko00001,ko01000	Belongs to the carbamate kinase family
PHMCMLLI_00748	5.27e-207	-	-	-	EG	-	-	-	EamA-like transporter family
PHMCMLLI_00749	9.98e-134	XK27_08875	-	-	O	-	-	-	PFAM peptidase M10A and M12B, matrixin and adamalysin
PHMCMLLI_00750	6.51e-82	-	-	-	S	-	-	-	Cupredoxin-like domain
PHMCMLLI_00751	2.2e-65	-	-	-	S	-	-	-	Cupredoxin-like domain
PHMCMLLI_00752	0.0	copA	3.6.3.3, 3.6.3.5, 3.6.3.54	-	P	ko:K01534,ko:K17686	ko01524,ko04016,map01524,map04016	ko00000,ko00001,ko01000	P-type ATPase
PHMCMLLI_00753	3.98e-116	-	-	-	-	-	-	-	-
PHMCMLLI_00755	1.28e-75	-	-	-	-	-	-	-	-
PHMCMLLI_00756	1.28e-209	nhaP3	-	-	P	ko:K03316	-	ko00000	Sodium proton antiporter
PHMCMLLI_00757	8.29e-76	nhaP3	-	-	P	ko:K03316	-	ko00000	Sodium proton antiporter
PHMCMLLI_00764	6.94e-127	-	-	-	S	ko:K06919	-	ko00000	D5 N terminal like
PHMCMLLI_00765	2.57e-57	-	-	-	-	-	-	-	-
PHMCMLLI_00769	1.07e-23	-	-	-	S	-	-	-	Helix-turn-helix domain
PHMCMLLI_00770	0.000932	-	-	-	K	-	-	-	Cro/C1-type HTH DNA-binding domain
PHMCMLLI_00771	1.66e-167	int2	-	-	L	-	-	-	Belongs to the 'phage' integrase family
PHMCMLLI_00792	8.29e-29	-	-	-	S	-	-	-	Acyltransferase family
PHMCMLLI_00795	3.15e-53	-	-	-	S	-	-	-	Glycosyltransferase, group 2 family protein
PHMCMLLI_00796	5.17e-34	-	-	-	S	-	-	-	Glycosyltransferase like family 2
PHMCMLLI_00797	1.29e-37	-	-	-	M	-	-	-	Glycosyltransferase, group 2 family protein
PHMCMLLI_00798	7.07e-32	-	-	-	M	-	-	-	Glycosyltransferase sugar-binding region containing DXD motif
PHMCMLLI_00799	6.05e-84	cps2I	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
PHMCMLLI_00801	1.07e-49	-	-	-	M	-	-	-	Pfam:DUF1792
PHMCMLLI_00802	3.33e-81	wefC	-	-	M	-	-	-	Stealth protein CR2, conserved region 2
PHMCMLLI_00803	4.69e-106	-	-	GT4	G	ko:K19422	-	ko00000,ko01000	Glycosyl transferase 4-like domain
PHMCMLLI_00804	5.26e-61	-	-	-	M	ko:K13012	-	ko00000,ko01005	Bacterial sugar transferase
PHMCMLLI_00805	5.15e-137	ywqD	-	-	D	-	-	-	Capsular exopolysaccharide family
PHMCMLLI_00806	3.74e-127	epsB	-	-	M	-	-	-	biosynthesis protein
PHMCMLLI_00808	0.0	-	-	-	D	-	-	-	Domain of Unknown Function (DUF1542)
PHMCMLLI_00809	0.0	cshA	3.6.4.13	-	F	ko:K05592	ko03018,map03018	ko00000,ko00001,ko01000,ko03009,ko03019	DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
PHMCMLLI_00810	0.0	murF	6.3.2.10	-	M	ko:K01929	ko00300,ko00550,ko01100,ko01502,map00300,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
PHMCMLLI_00811	2.61e-204	htpX	-	-	O	ko:K03799	-	ko00000,ko00002,ko01000,ko01002	Belongs to the peptidase M48B family
PHMCMLLI_00812	1.16e-121	lemA	-	-	S	ko:K03744	-	ko00000	LemA family
PHMCMLLI_00813	4.69e-113	ptpA	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
PHMCMLLI_00814	1.06e-154	-	-	-	G	-	-	-	Belongs to the phosphoglycerate mutase family
PHMCMLLI_00815	1.59e-209	fba	4.1.2.13, 4.1.2.29	-	G	ko:K01624,ko:K03339	ko00010,ko00030,ko00051,ko00562,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00562,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Fructose-1,6-bisphosphate aldolase, class II
PHMCMLLI_00816	1.43e-177	tpiA	5.3.1.1	-	G	ko:K01803	ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
PHMCMLLI_00817	3.7e-192	-	-	-	G	-	-	-	Right handed beta helix region
PHMCMLLI_00818	0.0	pps	2.7.9.2	-	H	ko:K01007	ko00620,ko00680,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate
PHMCMLLI_00819	2.48e-161	srtA	3.4.22.70	-	M	ko:K07284	-	ko00000,ko01000,ko01002,ko01011	sortase family
PHMCMLLI_00820	5.56e-214	-	-	-	S	-	-	-	Alpha/beta hydrolase of unknown function (DUF915)
PHMCMLLI_00821	2.26e-303	pts13C	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PHMCMLLI_00822	9.43e-56	rpmE2	-	-	J	ko:K02909	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L31
PHMCMLLI_00823	9.55e-303	murA	2.5.1.7	-	M	ko:K00790	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PHMCMLLI_00824	0.0	pyrG	6.3.4.2	-	F	ko:K01937	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
PHMCMLLI_00825	2.68e-80	rpoE	-	-	K	ko:K03048	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko03021,ko03400	Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
PHMCMLLI_00826	3.15e-71	ywiB	-	-	S	-	-	-	Domain of unknown function (DUF1934)
PHMCMLLI_00827	2.82e-196	lipL	2.3.1.200, 2.3.1.204	-	H	ko:K16869,ko:K18821	-	ko00000,ko01000	biotin lipoate A B protein ligase
PHMCMLLI_00828	0.0	ywfO	-	-	S	ko:K06885	-	ko00000	HD domain protein
PHMCMLLI_00829	1.89e-189	yidA	-	-	S	-	-	-	hydrolase
PHMCMLLI_00830	1.38e-101	-	-	-	-	-	-	-	-
PHMCMLLI_00831	3.53e-229	prs	2.7.6.1	-	F	ko:K00948	ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PHMCMLLI_00832	2.74e-316	glmU	2.3.1.157, 2.7.7.23	-	M	ko:K04042	ko00520,ko01100,ko01130,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
PHMCMLLI_00833	2.09e-190	purR	-	-	F	ko:K09685	-	ko00000,ko03000	pur operon repressor
PHMCMLLI_00834	3.54e-165	-	-	-	U	ko:K02075	-	ko00000,ko00002,ko02000	ABC 3 transport family
PHMCMLLI_00835	9.8e-158	adcC	-	-	P	ko:K02074,ko:K09817,ko:K11710	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter
PHMCMLLI_00836	6.46e-212	psaA	-	-	P	ko:K02077,ko:K11707	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the bacterial solute-binding protein 9 family
PHMCMLLI_00837	1.71e-206	ispE	2.7.1.148	-	F	ko:K00919,ko:K16924	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko02000	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
PHMCMLLI_00838	2.74e-50	veg	-	-	S	-	-	-	Biofilm formation stimulator VEG
PHMCMLLI_00839	6.92e-204	ksgA	2.1.1.182	-	J	ko:K02528	-	ko00000,ko01000,ko03009	Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
PHMCMLLI_00840	1.04e-128	rnmV	3.1.26.8	-	J	ko:K05985	-	ko00000,ko01000	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
PHMCMLLI_00841	7.52e-200	tatD	-	-	L	ko:K03424	-	ko00000,ko01000	hydrolase, TatD family
PHMCMLLI_00842	0.0	metG	6.1.1.10	-	J	ko:K01874	ko00450,ko00970,map00450,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
PHMCMLLI_00843	4.55e-206	yunF	-	-	F	-	-	-	Protein of unknown function DUF72
PHMCMLLI_00845	8.74e-170	cobB	-	-	K	ko:K12410	-	ko00000,ko01000	SIR2 family
PHMCMLLI_00846	4.99e-224	-	-	-	-	-	-	-	-
PHMCMLLI_00847	3.92e-288	mvaA	1.1.1.88, 2.3.1.9	-	C	ko:K00054,ko:K00626	ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the HMG-CoA reductase family
PHMCMLLI_00848	1.03e-213	ppx	3.6.1.11, 3.6.1.40	-	FP	ko:K01524	ko00230,map00230	ko00000,ko00001,ko01000	exopolyphosphatase
PHMCMLLI_00849	1.59e-242	trpS	6.1.1.2	-	J	ko:K01867	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-I aminoacyl-tRNA synthetase family
PHMCMLLI_00850	3.71e-235	-	2.1.1.72	-	L	ko:K00571	-	ko00000,ko01000,ko02048	Belongs to the N(4) N(6)-methyltransferase family
PHMCMLLI_00851	7.04e-107	ndk	2.7.4.6	-	F	ko:K00940	ko00230,ko00240,ko00983,ko01100,ko01110,ko01130,ko04016,map00230,map00240,map00983,map01100,map01110,map01130,map04016	ko00000,ko00001,ko00002,ko01000,ko04131	Belongs to the NDK family
PHMCMLLI_00852	0.0	-	-	-	L	-	-	-	DNA helicase
PHMCMLLI_00853	6.38e-260	napA	-	-	P	-	-	-	Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
PHMCMLLI_00855	0.0	gabT	2.6.1.19, 5.1.1.21	-	E	ko:K00823,ko:K20708	ko00250,ko00410,ko00640,ko00650,ko01100,ko01120,map00250,map00410,map00640,map00650,map01100,map01120	ko00000,ko00001,ko00002,ko01000,ko01007	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
PHMCMLLI_00856	0.0	ctrA	-	-	E	ko:K03294	-	ko00000	amino acid
PHMCMLLI_00857	2.83e-152	nth	4.2.99.18	-	L	ko:K10773	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
PHMCMLLI_00858	4.37e-57	-	1.3.5.4	-	S	ko:K00244	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	ko00000,ko00001,ko00002,ko01000	FMN binding
PHMCMLLI_00859	1.7e-280	blt	-	-	EGP	ko:K08153	-	ko00000,ko00002,ko02000	transporter
PHMCMLLI_00860	1.47e-216	hdhL	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	Belongs to the LDH MDH superfamily
PHMCMLLI_00861	2.06e-198	metQ	-	-	P	ko:K02073	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the nlpA lipoprotein family
PHMCMLLI_00862	7e-244	metN	-	-	P	ko:K02071	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
PHMCMLLI_00863	7.46e-140	metI	-	-	P	ko:K02072	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
PHMCMLLI_00864	5.03e-278	-	3.5.1.18	-	E	ko:K01439	ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000	succinyl-diaminopimelate desuccinylase
PHMCMLLI_00865	0.0	eriC	-	-	P	ko:K03281	-	ko00000	chloride
PHMCMLLI_00866	2.58e-102	msrB	1.8.4.12	-	O	ko:K07305	-	ko00000,ko01000	peptide methionine sulfoxide reductase
PHMCMLLI_00867	1.61e-137	-	-	-	P	ko:K05846	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter, permease protein
PHMCMLLI_00868	3.69e-183	proV	-	-	E	ko:K05847	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter, ATP-binding protein
PHMCMLLI_00869	4.74e-139	proWZ	-	-	P	ko:K05846	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
PHMCMLLI_00870	8.79e-208	proWY	-	-	M	ko:K05845	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter, substrate-binding protein, QAT family
PHMCMLLI_00871	5.27e-95	ywnA	-	-	K	-	-	-	Transcriptional regulator
PHMCMLLI_00872	5.47e-199	-	-	-	GM	-	-	-	NAD(P)H-binding
PHMCMLLI_00873	4.44e-11	-	-	-	-	-	-	-	-
PHMCMLLI_00874	8.23e-39	-	-	-	L	ko:K07491	-	ko00000	PFAM transposase IS200-family protein
PHMCMLLI_00875	8.05e-53	-	-	-	S	-	-	-	Protein of unknown function (DUF1797)
PHMCMLLI_00877	0.0	mprF	2.3.2.3	-	S	ko:K14205	ko01503,ko02020,ko05150,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01000,ko01504	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
PHMCMLLI_00879	2.84e-208	yjbO	5.4.99.23	-	J	ko:K06180	-	ko00000,ko01000,ko03009	Responsible for synthesis of pseudouridine from uracil
PHMCMLLI_00880	2.33e-154	-	-	-	S	-	-	-	Domain of unknown function (DUF4811)
PHMCMLLI_00881	0.0	ycnB	-	-	U	-	-	-	Belongs to the major facilitator superfamily
PHMCMLLI_00882	1.26e-96	-	-	-	K	-	-	-	MerR HTH family regulatory protein
PHMCMLLI_00883	1.58e-72	-	-	-	-	-	-	-	-
PHMCMLLI_00884	0.0	rnjA	-	-	J	ko:K12574	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PHMCMLLI_00885	4.5e-279	-	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
PHMCMLLI_00886	2.11e-140	glnP	-	-	P	ko:K10040	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
PHMCMLLI_00887	7.44e-143	glnM	-	-	P	ko:K10040	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
PHMCMLLI_00888	1.15e-196	peb1A	-	-	ET	ko:K10039	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
PHMCMLLI_00889	1.14e-172	glnQ	-	-	E	ko:K10041	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
PHMCMLLI_00890	2.79e-107	-	-	-	T	-	-	-	Belongs to the universal stress protein A family
PHMCMLLI_00891	5.5e-141	-	-	-	S	-	-	-	VIT family
PHMCMLLI_00892	1.27e-152	-	-	-	S	-	-	-	membrane
PHMCMLLI_00893	4.92e-213	-	-	-	P	ko:K16264	-	ko00000,ko02000	cation diffusion facilitator family transporter
PHMCMLLI_00894	1.34e-160	mntR	-	-	K	ko:K03709	-	ko00000,ko03000	iron dependent repressor
PHMCMLLI_00895	2.54e-42	cspC	-	-	K	ko:K03704	-	ko00000,ko03000	Cold shock protein
PHMCMLLI_00896	8.53e-166	-	-	-	S	-	-	-	Putative threonine/serine exporter
PHMCMLLI_00897	1.06e-106	-	-	-	S	-	-	-	Threonine/Serine exporter, ThrE
PHMCMLLI_00898	6.58e-152	-	-	-	I	-	-	-	phosphatase
PHMCMLLI_00899	2.29e-06	-	2.3.1.128	-	J	ko:K03790	-	ko00000,ko01000,ko03009	Acetyltransferase (GNAT) domain
PHMCMLLI_00900	0.0	lysP	-	-	E	ko:K03293,ko:K11733	-	ko00000,ko02000	amino acid
PHMCMLLI_00901	1.29e-148	dgk2	-	-	F	-	-	-	deoxynucleoside kinase
PHMCMLLI_00907	4.07e-13	-	-	-	-	-	-	-	-
PHMCMLLI_00908	1.69e-231	-	-	-	S	ko:K06889	-	ko00000	Hydrolases of the alpha beta superfamily
PHMCMLLI_00909	5.17e-249	adhP	1.1.1.1	-	C	ko:K00001,ko:K13953	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	alcohol dehydrogenase
PHMCMLLI_00910	1.39e-101	ctsR	-	-	K	ko:K03708	-	ko00000,ko03000	Belongs to the CtsR family
PHMCMLLI_00911	0.0	clpC	-	-	O	ko:K03696	ko01100,map01100	ko00000,ko03110	Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
PHMCMLLI_00912	2.09e-143	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PHMCMLLI_00913	0.0	rpoB	2.7.7.6	-	K	ko:K03043	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PHMCMLLI_00914	0.0	rpoC	2.7.7.6	-	K	ko:K03046	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PHMCMLLI_00915	4.5e-261	-	-	-	-	-	-	-	-
PHMCMLLI_00916	8.01e-153	comC	3.4.23.43	-	NOU	ko:K02236	-	ko00000,ko00002,ko01000,ko02044	Bacterial Peptidase A24 N-terminal domain
PHMCMLLI_00917	2.51e-94	rpsL	-	-	J	ko:K02950	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
PHMCMLLI_00918	2.06e-108	rpsG	-	-	J	ko:K02992	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
PHMCMLLI_00919	0.0	fusA	-	-	J	ko:K02355	-	ko00000,ko03012,ko03029	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
PHMCMLLI_00920	1.28e-65	rpsJ	-	-	J	ko:K02946	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Involved in the binding of tRNA to the ribosomes
PHMCMLLI_00921	5.45e-153	rplC	-	-	J	ko:K02906	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
PHMCMLLI_00922	6.64e-139	rplD	-	-	J	ko:K02926	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the polypeptide exit tunnel
PHMCMLLI_00923	3.61e-61	rplW	-	-	J	ko:K02892	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
PHMCMLLI_00924	1.16e-203	rplB	-	-	J	ko:K02886	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
PHMCMLLI_00925	5.72e-62	rpsS	-	-	J	ko:K02965	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
PHMCMLLI_00926	4.36e-70	rplV	-	-	J	ko:K02890	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
PHMCMLLI_00927	9.81e-157	rpsC	-	-	J	ko:K02982	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
PHMCMLLI_00928	1.96e-98	rplP	-	-	J	ko:K02878	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
PHMCMLLI_00929	5.49e-38	rpmC	-	-	J	ko:K02904	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uL29 family
PHMCMLLI_00930	1.1e-55	rpsQ	-	-	J	ko:K02961	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
PHMCMLLI_00931	3.62e-79	rplN	-	-	J	ko:K02874	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
PHMCMLLI_00932	2.58e-65	rplX	-	-	J	ko:K02895	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
PHMCMLLI_00933	7.42e-125	rplE	-	-	J	ko:K02931	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
PHMCMLLI_00934	1.54e-87	rpsH	-	-	J	ko:K02994	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
PHMCMLLI_00935	2.6e-124	rplF	-	-	J	ko:K02933	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
PHMCMLLI_00936	5.03e-75	rplR	-	-	J	ko:K02881	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
PHMCMLLI_00937	5.95e-112	rpsE	-	-	J	ko:K02988	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
PHMCMLLI_00938	5.94e-34	rpmD	-	-	J	ko:K02907	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L30
PHMCMLLI_00939	6.05e-93	rplO	-	-	J	ko:K02876	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to the 23S rRNA
PHMCMLLI_00940	2.88e-306	secY	-	-	U	ko:K03076	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
PHMCMLLI_00941	4.52e-161	adk	2.7.4.3	-	F	ko:K00939	ko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
PHMCMLLI_00942	6.91e-45	infA	-	-	J	ko:K02518	-	ko00000,ko03012	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
PHMCMLLI_00943	5.79e-21	rpmJ	-	-	J	ko:K02919	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL36 family
PHMCMLLI_00944	1.54e-75	rpsM	-	-	J	ko:K02952	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
PHMCMLLI_00945	1.62e-83	rpsK	-	-	J	ko:K02948	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
PHMCMLLI_00946	2.19e-220	rpoA	2.7.7.6	-	K	ko:K03040	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PHMCMLLI_00947	8.08e-83	rplQ	-	-	J	ko:K02879	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L17
PHMCMLLI_00948	2.03e-185	ecfA1	-	-	P	ko:K16786	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PHMCMLLI_00949	2.6e-199	ecfA2	-	-	P	ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PHMCMLLI_00950	4.1e-181	ecfT	-	-	U	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PHMCMLLI_00951	1.23e-181	truA	5.4.99.12	-	J	ko:K06173	-	ko00000,ko01000,ko03016	Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
PHMCMLLI_00952	9.25e-103	rplM	-	-	J	ko:K02871	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
PHMCMLLI_00953	3.94e-85	rpsI	-	-	J	ko:K02996	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uS9 family
PHMCMLLI_00954	1.56e-180	budC	1.1.1.304, 1.1.1.76	-	IQ	ko:K03366	ko00650,map00650	ko00000,ko00001,ko01000	reductase
PHMCMLLI_00955	5.09e-148	acmA	3.2.1.17, 3.2.1.96	-	NU	ko:K01185,ko:K01227	ko00511,map00511	ko00000,ko00001,ko01000	mannosyl-glycoprotein
PHMCMLLI_00956	2.36e-131	xpt	2.4.2.22	-	F	ko:K03816	ko00230,ko01100,ko01110,map00230,map01100,map01110	ko00000,ko00001,ko01000	Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
PHMCMLLI_00957	1.32e-271	purK2	6.3.4.18	-	F	ko:K01589	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
PHMCMLLI_00958	0.0	pcrA	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	ATP-dependent DNA helicase
PHMCMLLI_00959	0.0	ligA	6.5.1.2	-	L	ko:K01972	ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430	ko00000,ko00001,ko01000,ko03032,ko03400	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
PHMCMLLI_00960	1.11e-260	camS	-	-	S	-	-	-	sex pheromone
PHMCMLLI_00961	1.36e-66	gatC	6.3.5.6, 6.3.5.7	-	J	ko:K02435	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PHMCMLLI_00962	0.0	gatA	6.3.5.6, 6.3.5.7	-	J	ko:K02433	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
PHMCMLLI_00963	0.0	gatB	6.3.5.6, 6.3.5.7	-	J	ko:K02434	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PHMCMLLI_00964	5.49e-237	dagK	2.7.1.107	-	G	ko:K07029	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko01000	Lipid kinase
PHMCMLLI_00965	0.0	rumA_2	2.1.1.190	-	J	ko:K03215	-	ko00000,ko01000,ko03009	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PHMCMLLI_00968	5.04e-89	-	-	-	K	-	-	-	Psort location Cytoplasmic, score
PHMCMLLI_00969	1.48e-114	entB	-	-	Q	-	-	-	Isochorismatase family
PHMCMLLI_00970	6.59e-118	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PHMCMLLI_00971	1.68e-91	-	-	-	S	-	-	-	NADPH-dependent FMN reductase
PHMCMLLI_00972	1.09e-217	-	-	-	L	-	-	-	Plasmid pRiA4b ORF-3-like protein
PHMCMLLI_00974	1.04e-56	-	-	-	K	ko:K03830	-	ko00000,ko01000	Acetyltransferase (GNAT) domain
PHMCMLLI_00975	3.14e-76	-	-	-	S	-	-	-	Protein of unknown function (DUF3021)
PHMCMLLI_00976	6.95e-95	-	-	-	K	-	-	-	LytTr DNA-binding domain
PHMCMLLI_00977	2.17e-184	cylB	-	-	V	ko:K11051	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC-2 type transporter
PHMCMLLI_00978	1.69e-197	-	-	-	V	ko:K11050	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
PHMCMLLI_00979	6.57e-63	-	-	-	-	-	-	-	-
PHMCMLLI_00980	0.0	XK27_08510	-	-	L	-	-	-	Type III restriction protein res subunit
PHMCMLLI_00981	2.64e-186	-	-	-	S	-	-	-	PFAM Archaeal ATPase
PHMCMLLI_00982	8.38e-112	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
PHMCMLLI_00983	8.89e-269	amt	-	-	P	ko:K03320	-	ko00000,ko02000	ammonium transporter
PHMCMLLI_00984	9.43e-317	-	1.8.1.7	-	C	ko:K00383	ko00480,ko04918,map00480,map04918	ko00000,ko00001,ko01000	pyridine nucleotide-disulfide oxidoreductase
PHMCMLLI_00985	1.13e-60	XK27_07210	-	-	S	-	-	-	B3 4 domain
PHMCMLLI_00986	2.72e-42	XK27_07210	-	-	S	-	-	-	B3 4 domain
PHMCMLLI_00987	1.18e-116	-	-	-	-	-	-	-	-
PHMCMLLI_00988	4.52e-160	pnb	-	-	C	-	-	-	nitroreductase
PHMCMLLI_00989	5.07e-98	adaB	2.1.1.63	-	L	ko:K00567,ko:K10778,ko:K13531	-	ko00000,ko01000,ko03000,ko03400	Methyltransferase
PHMCMLLI_00990	5.54e-216	XK27_00915	-	-	C	-	-	-	Luciferase-like monooxygenase
PHMCMLLI_00991	2.04e-54	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
PHMCMLLI_00992	4.96e-40	-	-	-	S	-	-	-	NAD(P)H dehydrogenase (quinone) activity
PHMCMLLI_00993	3.97e-144	-	-	-	S	-	-	-	X-Pro dipeptidyl-peptidase (S15 family)
PHMCMLLI_00994	8.19e-48	-	1.6.5.2	-	S	ko:K03809	ko00130,ko01110,map00130,map01110	ko00000,ko00001,ko01000	NAD(P)H dehydrogenase (quinone) activity
PHMCMLLI_00995	4.07e-217	-	3.2.1.96, 3.5.1.28	GH73	M	ko:K01227,ko:K01447,ko:K13714,ko:K13731	ko00511,ko05100,map00511,map05100	ko00000,ko00001,ko01000	N-acetylmuramoyl-L-alanine amidase
PHMCMLLI_00996	7.58e-98	-	-	-	S	-	-	-	Protein of unknown function (DUF3021)
PHMCMLLI_00997	1.05e-102	-	-	-	K	-	-	-	LytTr DNA-binding domain
PHMCMLLI_00998	2.05e-26	-	-	-	-	-	-	-	-
PHMCMLLI_00999	3.03e-259	-	-	-	P	-	-	-	Major Facilitator Superfamily
PHMCMLLI_01000	9.21e-153	ybhL	-	-	S	ko:K06890	-	ko00000	Belongs to the BI1 family
PHMCMLLI_01001	1.11e-105	yjcF	3.5.4.33, 4.4.1.8	-	K	ko:K02348,ko:K07000,ko:K11991,ko:K14155	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko01000,ko01007,ko03016	protein acetylation
PHMCMLLI_01002	6.21e-245	-	-	-	S	-	-	-	Protein of unknown function (DUF3114)
PHMCMLLI_01003	0.0	gshA	6.3.2.2	-	H	ko:K01919	ko00270,ko00480,ko01100,map00270,map00480,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the glutamate--cysteine ligase type 1 family
PHMCMLLI_01004	2.64e-213	-	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	Belongs to the LDH MDH superfamily
PHMCMLLI_01005	4.36e-137	-	3.2.2.10	-	S	ko:K06966	ko00230,ko00240,map00230,map00240	ko00000,ko00001,ko01000	Belongs to the LOG family
PHMCMLLI_01006	4.62e-81	-	-	-	S	-	-	-	Domain of unknown function (DUF4828)
PHMCMLLI_01007	5.34e-245	mocA	-	-	S	-	-	-	Oxidoreductase
PHMCMLLI_01008	3.85e-297	yfmL	-	-	L	-	-	-	DEAD DEAH box helicase
PHMCMLLI_01010	1.41e-264	mnaA	5.1.3.14	-	G	ko:K01791	ko00520,ko01100,ko05111,map00520,map01100,map05111	ko00000,ko00001,ko00002,ko01000,ko01005	Belongs to the UDP-N-acetylglucosamine 2-epimerase family
PHMCMLLI_01011	2.36e-73	-	-	-	-	-	-	-	-
PHMCMLLI_01012	4.94e-88	gtcA	-	-	S	-	-	-	Teichoic acid glycosylation protein
PHMCMLLI_01013	1.35e-102	ykuP	-	-	C	ko:K03839	-	ko00000	Flavodoxin
PHMCMLLI_01014	4.96e-216	map	3.4.11.18	-	E	ko:K01265	-	ko00000,ko01000,ko01002	Methionine Aminopeptidase
PHMCMLLI_01015	2.3e-279	arcT	-	-	E	-	-	-	Aminotransferase
PHMCMLLI_01016	0.0	arcD	-	-	E	ko:K03758	-	ko00000,ko02000	Arginine ornithine antiporter
PHMCMLLI_01017	0.0	potE	-	-	E	-	-	-	Amino Acid
PHMCMLLI_01018	2.05e-200	rbn	-	-	S	ko:K07058	-	ko00000	Belongs to the UPF0761 family
PHMCMLLI_01019	7.29e-46	-	-	-	S	-	-	-	Protein of unknown function (DUF2922)
PHMCMLLI_01020	2.53e-42	-	-	-	-	-	-	-	-
PHMCMLLI_01021	1.27e-178	recX	-	-	S	ko:K03565	-	ko00000,ko03400	Regulatory protein RecX
PHMCMLLI_01022	2.44e-127	rfbP	-	-	M	ko:K13012,ko:K19428	-	ko00000,ko01000,ko01005	Bacterial sugar transferase
PHMCMLLI_01023	1.29e-145	cps1D	-	-	M	-	-	-	Domain of unknown function (DUF4422)
PHMCMLLI_01024	5.79e-218	yfdH	-	GT2	M	ko:K12999	-	ko00000,ko01000,ko01003,ko01005	Glycosyltransferase, group 2 family protein
PHMCMLLI_01025	0.0	spoIIQ	-	-	M	ko:K06386	-	ko00000	Peptidase family M23
PHMCMLLI_01026	0.0	-	-	-	G	-	-	-	Peptidase_C39 like family
PHMCMLLI_01027	3.89e-47	-	-	-	-	-	-	-	-
PHMCMLLI_01028	3.02e-279	glf	5.4.99.9	-	M	ko:K01854	ko00052,ko00520,map00052,map00520	ko00000,ko00001,ko01000	UDP-galactopyranose mutase
PHMCMLLI_01029	9.79e-272	cps1C	-	-	S	ko:K03328	-	ko00000	Membrane protein involved in the export of O-antigen and teichoic acid
PHMCMLLI_01030	8.11e-97	-	-	GT2	M	ko:K12997	-	ko00000,ko01000,ko01003,ko01005	Glycosyl transferase family 2
PHMCMLLI_01031	7.32e-140	-	-	-	S	-	-	-	Glycosyltransferase like family 2
PHMCMLLI_01032	2.18e-129	-	-	-	M	-	-	-	Glycosyltransferase like family 2
PHMCMLLI_01033	1.09e-116	cps3F	-	-	-	-	-	-	-
PHMCMLLI_01034	3.35e-53	-	-	-	M	-	-	-	biosynthesis protein
PHMCMLLI_01035	9.12e-111	-	-	-	M	-	-	-	Domain of unknown function (DUF4422)
PHMCMLLI_01036	1.24e-112	-	-	-	S	-	-	-	Glycosyltransferase like family
PHMCMLLI_01037	9.25e-12	-	-	-	-	-	-	-	-
PHMCMLLI_01038	8.26e-93	-	-	-	S	-	-	-	Bacterial membrane protein, YfhO
PHMCMLLI_01040	6.3e-170	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
PHMCMLLI_01042	0.0	-	-	CBM50	NU	ko:K02395,ko:K19223	-	ko00000,ko01000,ko01002,ko01011,ko02035	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
PHMCMLLI_01043	8.17e-208	rfbA	2.7.7.24	-	H	ko:K00973	ko00521,ko00523,ko00525,ko01130,map00521,map00523,map00525,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
PHMCMLLI_01044	7.93e-140	rfbC	5.1.3.13	-	M	ko:K01790	ko00521,ko00523,ko01130,map00521,map00523,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
PHMCMLLI_01045	1.34e-262	rfbB	4.2.1.46	-	M	ko:K01710	ko00521,ko00523,ko00525,ko01055,ko01130,map00521,map00523,map00525,map01055,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
PHMCMLLI_01046	1.51e-198	rfbD	1.1.1.133	-	M	ko:K00067	ko00521,ko00523,ko01130,map00521,map00523,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
PHMCMLLI_01047	0.0	-	-	-	G	-	-	-	Peptidase_C39 like family
PHMCMLLI_01048	3.74e-232	yueF	-	-	S	-	-	-	AI-2E family transporter
PHMCMLLI_01049	9.54e-116	-	-	-	K	-	-	-	transcriptional regulator (TetR family)
PHMCMLLI_01050	6.85e-234	yxeA	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter permease
PHMCMLLI_01051	1.49e-155	lolD	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PHMCMLLI_01052	0.0	yhcA	-	-	V	ko:K02003,ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PHMCMLLI_01053	3.38e-50	-	-	-	-	-	-	-	-
PHMCMLLI_01054	5.55e-66	czrA	-	-	K	ko:K22043	-	ko00000,ko03000	Transcriptional regulator, ArsR family
PHMCMLLI_01055	0.0	-	3.2.1.17	CBM50	NU	ko:K01185,ko:K02395,ko:K19223	-	ko00000,ko01000,ko01002,ko01011,ko02035	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
PHMCMLLI_01056	1.54e-220	scrR	-	-	K	ko:K02529,ko:K03484	-	ko00000,ko03000	Transcriptional regulator, LacI family
PHMCMLLI_01057	2.6e-33	-	-	-	-	-	-	-	-
PHMCMLLI_01058	2.83e-144	-	-	-	-	-	-	-	-
PHMCMLLI_01059	4.1e-272	yttB	-	-	EGP	-	-	-	Major Facilitator
PHMCMLLI_01060	2.28e-310	hisS	6.1.1.21	-	J	ko:K01892	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	histidyl-tRNA synthetase
PHMCMLLI_01061	1.48e-114	-	-	-	-	-	-	-	-
PHMCMLLI_01062	6.11e-142	nnrE	5.1.99.6	-	H	ko:K17759	-	ko00000,ko01000	Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S- specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX
PHMCMLLI_01063	0.0	-	-	-	S	-	-	-	Putative peptidoglycan binding domain
PHMCMLLI_01064	7.23e-162	-	-	-	M	-	-	-	ErfK YbiS YcfS YnhG
PHMCMLLI_01066	7.03e-134	-	-	-	-	-	-	-	-
PHMCMLLI_01067	2.06e-279	dacA	3.4.16.4	-	M	ko:K01286,ko:K07258	ko00550,ko01100,map00550,map01100	ko00000,ko00001,ko01000,ko01002,ko01011	Belongs to the peptidase S11 family
PHMCMLLI_01068	3.54e-181	-	-	-	S	-	-	-	Alpha beta hydrolase
PHMCMLLI_01069	3.32e-263	gldA	1.1.1.6	-	C	ko:K00005	ko00561,ko00640,ko01100,map00561,map00640,map01100	ko00000,ko00001,ko01000	dehydrogenase
PHMCMLLI_01070	4.43e-167	-	-	-	G	-	-	-	Major Facilitator Superfamily
PHMCMLLI_01071	1.45e-161	aroE	1.1.1.25	-	E	ko:K00014	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
PHMCMLLI_01072	4.45e-67	aroD	4.2.1.10	-	E	ko:K03785	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis-dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3- dehydroshikimate
PHMCMLLI_01073	1.58e-16	-	-	-	G	-	-	-	Major Facilitator
PHMCMLLI_01074	8.17e-203	aroC	4.2.3.5	-	E	ko:K01736	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
PHMCMLLI_01075	4.5e-45	-	-	-	-	-	-	-	-
PHMCMLLI_01076	8.34e-198	aroA	2.5.1.19	-	E	ko:K00800	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
PHMCMLLI_01077	7.69e-136	tyrA	1.3.1.12	-	E	ko:K04517	ko00400,ko00401,ko01100,ko01110,ko01130,ko01230,map00400,map00401,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	prephenate dehydrogenase
PHMCMLLI_01078	4.14e-45	aroK	2.7.1.71	-	F	ko:K00891	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
PHMCMLLI_01079	0.0	ltaS	2.7.8.20	-	M	ko:K19005	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
PHMCMLLI_01080	1.77e-56	-	-	-	-	-	-	-	-
PHMCMLLI_01081	4.03e-163	pgm3	-	-	G	-	-	-	phosphoglycerate mutase family
PHMCMLLI_01082	0.0	-	-	-	S	-	-	-	C4-dicarboxylate anaerobic carrier
PHMCMLLI_01083	0.0	nhaC	-	-	C	ko:K03315	-	ko00000,ko02000	Na H antiporter NhaC
PHMCMLLI_01084	5.83e-308	pbuX	-	-	F	ko:K03458,ko:K16169	-	ko00000,ko02000	xanthine permease
PHMCMLLI_01085	0.0	pepD1	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
PHMCMLLI_01086	8.21e-216	corA	-	-	P	ko:K03284	-	ko00000,ko02000	CorA-like Mg2+ transporter protein
PHMCMLLI_01087	2.85e-212	rluA	5.4.99.23, 5.4.99.28, 5.4.99.29	-	J	ko:K06177,ko:K06180	-	ko00000,ko01000,ko03009,ko03016	Responsible for synthesis of pseudouridine from uracil
PHMCMLLI_01088	3.78e-169	yceF	-	-	P	ko:K05794	-	ko00000	membrane
PHMCMLLI_01089	1.07e-72	trxA	-	-	O	ko:K03671	ko04621,ko05418,map04621,map05418	ko00000,ko00001,ko03110	Belongs to the thioredoxin family
PHMCMLLI_01090	3.08e-302	mepA	-	-	V	ko:K18908	-	ko00000,ko00002,ko01504,ko02000	MATE efflux family protein
PHMCMLLI_01091	4.72e-93	-	-	-	M	-	-	-	domain protein
PHMCMLLI_01092	1.06e-281	-	-	-	L	ko:K07487	-	ko00000	Transposase
PHMCMLLI_01093	4.45e-47	-	-	-	-	-	-	-	-
PHMCMLLI_01094	3.53e-69	-	-	-	S	-	-	-	Mazg nucleotide pyrophosphohydrolase
PHMCMLLI_01095	5.32e-206	xth	3.1.11.2	-	L	ko:K01142	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	exodeoxyribonuclease III
PHMCMLLI_01096	7.7e-110	-	-	-	-	-	-	-	-
PHMCMLLI_01097	4.04e-240	lacR	-	-	K	ko:K02529	-	ko00000,ko03000	Transcriptional regulator
PHMCMLLI_01098	0.0	lacS	-	-	G	ko:K11104,ko:K16209	-	ko00000,ko02000	Transporter
PHMCMLLI_01099	0.0	lacZ	3.2.1.23	-	G	ko:K12308	ko00052,map00052	ko00000,ko00001,ko01000	-beta-galactosidase
PHMCMLLI_01100	1.78e-42	-	-	-	-	-	-	-	-
PHMCMLLI_01101	3.12e-151	XK27_07085	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
PHMCMLLI_01102	9.17e-59	-	-	-	-	-	-	-	-
PHMCMLLI_01104	2.94e-20	-	-	-	-	-	-	-	-
PHMCMLLI_01105	1.02e-32	-	-	-	-	-	-	-	-
PHMCMLLI_01106	1.75e-184	-	-	-	S	-	-	-	Domain of unknown function DUF1829
PHMCMLLI_01107	4.79e-95	-	-	-	-	-	-	-	-
PHMCMLLI_01108	1.43e-73	folB	1.13.11.81, 4.1.2.25, 5.1.99.8	-	H	ko:K01633	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
PHMCMLLI_01109	1.52e-119	folK	2.7.6.3	-	H	ko:K00950	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
PHMCMLLI_01110	3.36e-136	folE	2.7.6.3, 3.5.4.16	-	F	ko:K00950,ko:K01495	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	GTP cyclohydrolase 1
PHMCMLLI_01111	2.67e-290	folC	6.3.2.12, 6.3.2.17	-	H	ko:K11754	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the folylpolyglutamate synthase family
PHMCMLLI_01112	5.76e-134	folQ	3.6.1.66	-	F	ko:K02428	ko00230,map00230	ko00000,ko00001,ko01000	Ham1 family
PHMCMLLI_01113	1.28e-274	folP	2.5.1.15	-	H	ko:K00796	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	dihydropteroate synthase
PHMCMLLI_01114	4.61e-61	-	-	-	-	-	-	-	-
PHMCMLLI_01115	1.49e-54	-	-	-	-	-	-	-	-
PHMCMLLI_01117	9.95e-216	ldh	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	Belongs to the LDH MDH superfamily. LDH family
PHMCMLLI_01118	1.76e-193	thiD	2.7.1.49, 2.7.4.7	-	H	ko:K00941	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Phosphomethylpyrimidine kinase
PHMCMLLI_01119	0.0	argS	6.1.1.19	-	J	ko:K01887	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Arginyl-tRNA synthetase
PHMCMLLI_01120	0.0	pbp2A	2.4.1.129, 3.4.16.4	GT51	M	ko:K12555	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01003,ko01011	penicillin-binding protein
PHMCMLLI_01121	2.42e-64	yheA	-	-	S	-	-	-	Belongs to the UPF0342 family
PHMCMLLI_01122	1.35e-284	yhaO	-	-	L	ko:K03547	-	ko00000,ko03400	Ser Thr phosphatase family protein
PHMCMLLI_01123	0.0	yhaN	-	-	L	-	-	-	AAA domain
PHMCMLLI_01124	3.96e-178	prsA	5.2.1.8	-	M	ko:K07533	-	ko00000,ko01000,ko03110	Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
PHMCMLLI_01126	1.49e-102	hit	-	-	FG	ko:K02503	-	ko00000,ko04147	histidine triad
PHMCMLLI_01127	6.35e-174	ecsA	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PHMCMLLI_01128	1.15e-279	ecsB	-	-	U	ko:K01992	-	ko00000,ko00002,ko02000	ABC transporter
PHMCMLLI_01129	1.85e-157	trmB	2.1.1.33	-	J	ko:K03439	-	ko00000,ko01000,ko03016	Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
PHMCMLLI_01130	3.16e-233	iolS	-	-	C	ko:K06607	-	ko00000,ko01000	Aldo keto reductase
PHMCMLLI_01131	2.54e-215	glsA	3.5.1.2	-	E	ko:K01425	ko00220,ko00250,ko00471,ko01100,ko04724,ko04727,ko04964,ko05206,ko05230,map00220,map00250,map00471,map01100,map04724,map04727,map04964,map05206,map05230	ko00000,ko00001,ko01000	Belongs to the glutaminase family
PHMCMLLI_01132	2.27e-75	-	-	-	S	-	-	-	Small secreted protein
PHMCMLLI_01133	2.95e-75	ytpP	-	-	CO	-	-	-	Thioredoxin
PHMCMLLI_01134	2.32e-152	ytpR	-	-	J	ko:K06878	-	ko00000	Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PHMCMLLI_01135	1.49e-63	-	-	-	S	-	-	-	Bacterial toxin of type II toxin-antitoxin system, YafQ
PHMCMLLI_01136	2.07e-37	-	-	-	D	ko:K19159	-	ko00000,ko02048	Antitoxin component of a toxin-antitoxin (TA) module
PHMCMLLI_01137	0.0	murC	6.3.2.8	-	M	ko:K01924	ko00471,ko00550,ko01100,map00471,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Belongs to the MurCDEF family
PHMCMLLI_01138	4.56e-154	ybhL	-	-	S	ko:K06890	-	ko00000	Belongs to the BI1 family
PHMCMLLI_01139	2.79e-153	-	-	-	S	-	-	-	Protein of unknown function (DUF1275)
PHMCMLLI_01140	0.0	polA	2.7.7.7	-	L	ko:K02335	ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440	ko00000,ko00001,ko01000,ko03032,ko03400	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
PHMCMLLI_01141	2.34e-205	fpg	3.2.2.23, 4.2.99.18	-	L	ko:K10563	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
PHMCMLLI_01142	8.76e-131	coaE	2.7.1.24	-	F	ko:K00859	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
PHMCMLLI_01143	2.82e-105	nrdR	-	-	K	ko:K07738	-	ko00000,ko03000	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
PHMCMLLI_01144	4.03e-276	dnaB	-	-	L	ko:K03346	-	ko00000,ko03032	replication initiation and membrane attachment
PHMCMLLI_01145	3.36e-219	dnaI	-	-	L	ko:K11144	-	ko00000,ko03032	Primosomal protein DnaI
PHMCMLLI_01146	1.07e-110	infC	-	-	J	ko:K02520	-	ko00000,ko03012,ko03029	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
PHMCMLLI_01147	1.82e-37	rpmI	-	-	J	ko:K02916	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL35 family
PHMCMLLI_01148	5.46e-74	rplT	-	-	J	ko:K02887	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
PHMCMLLI_01149	7.78e-125	yqeG	-	-	S	ko:K07015	-	ko00000	HAD phosphatase, family IIIA
PHMCMLLI_01150	3.14e-278	yqeH	-	-	S	ko:K06948	-	ko00000,ko03009	Ribosome biogenesis GTPase YqeH
PHMCMLLI_01151	5.4e-63	yhbY	-	-	J	ko:K07574	-	ko00000,ko03009	RNA-binding protein
PHMCMLLI_01152	4.9e-158	nadD	2.7.7.18	-	H	ko:K00969	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
PHMCMLLI_01153	1.71e-144	yqeK	-	-	H	-	-	-	Hydrolase, HD family
PHMCMLLI_01154	1.9e-79	rsfS	-	-	J	ko:K09710	-	ko00000,ko03009	Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
PHMCMLLI_01155	3.69e-178	yqeM	-	-	Q	-	-	-	Methyltransferase
PHMCMLLI_01156	3.95e-273	ylbM	-	-	S	-	-	-	Belongs to the UPF0348 family
PHMCMLLI_01157	1.01e-129	ylbN	-	-	S	ko:K07040	-	ko00000	Uncharacterized ACR, COG1399
PHMCMLLI_01158	1.02e-38	rpmF	-	-	J	ko:K02911	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Belongs to the bacterial ribosomal protein bL32 family
PHMCMLLI_01159	1.38e-155	csrR	-	-	K	-	-	-	response regulator
PHMCMLLI_01160	0.0	arlS	2.7.13.3	-	T	ko:K18940	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
PHMCMLLI_01161	0.0	potE	-	-	E	-	-	-	Amino Acid
PHMCMLLI_01162	1.44e-295	-	-	-	V	-	-	-	MatE
PHMCMLLI_01163	1.85e-90	def2	3.5.1.88	-	J	ko:K01462	-	ko00000,ko01000	Removes the formyl group from the N-terminal Met of newly synthesized proteins
PHMCMLLI_01164	9.55e-216	yidC	-	-	U	ko:K03217	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044,ko03029	Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PHMCMLLI_01165	7.29e-60	acyP	3.6.1.7	-	C	ko:K01512	ko00620,ko00627,ko01120,map00620,map00627,map01120	ko00000,ko00001,ko01000	Belongs to the acylphosphatase family
PHMCMLLI_01166	6.64e-187	spoU	-	-	J	ko:K03437	-	ko00000,ko03016	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PHMCMLLI_01167	3.75e-119	XK27_09705	-	-	S	ko:K06950	-	ko00000	Metal dependent phosphohydrolases with conserved 'HD' motif.
PHMCMLLI_01168	5.79e-78	yodB	-	-	K	-	-	-	Transcriptional regulator, HxlR family
PHMCMLLI_01169	2.12e-251	pheS	6.1.1.20	-	J	ko:K01889	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
PHMCMLLI_01170	0.0	pheT	6.1.1.20	-	J	ko:K01890	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PHMCMLLI_01171	5.07e-150	-	-	-	M	-	-	-	PFAM NLP P60 protein
PHMCMLLI_01172	2.06e-152	udk	2.7.1.48	-	F	ko:K00876	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	Cytidine monophosphokinase
PHMCMLLI_01173	6.08e-102	greA	-	-	K	ko:K03624	-	ko00000,ko03021	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PHMCMLLI_01174	1.33e-91	yneR	-	-	S	-	-	-	Belongs to the HesB IscA family
PHMCMLLI_01175	0.0	-	-	-	S	-	-	-	membrane
PHMCMLLI_01176	0.0	pbp2b	-	-	M	ko:K00687,ko:K12553,ko:K21465,ko:K21466	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01011	Penicillin-binding Protein
PHMCMLLI_01177	1.53e-29	rpmG	-	-	J	ko:K02913	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL33 family
PHMCMLLI_01178	1.55e-128	fthC	6.3.3.2	-	H	ko:K01934	ko00670,ko01100,map00670,map01100	ko00000,ko00001,ko01000	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
PHMCMLLI_01179	2.39e-147	gluP	3.4.21.105	-	S	ko:K19225	-	ko00000,ko01000,ko01002	Peptidase, S54 family
PHMCMLLI_01180	7.07e-48	yqgQ	-	-	S	-	-	-	Bacterial protein of unknown function (DUF910)
PHMCMLLI_01181	2.51e-235	glcK	2.7.1.2	-	G	ko:K00845	ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Glucokinase
PHMCMLLI_01182	6.3e-87	yqhL	-	-	P	-	-	-	Rhodanese-like protein
PHMCMLLI_01183	1.18e-30	-	-	-	S	-	-	-	Protein of unknown function (DUF3042)
PHMCMLLI_01184	3.96e-224	miaA	2.5.1.75	-	F	ko:K00791	ko00908,ko01100,ko01110,map00908,map01100,map01110	ko00000,ko00001,ko01000,ko01006,ko03016	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
PHMCMLLI_01185	0.0	glnA	6.3.1.2	-	E	ko:K01915	ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727	ko00000,ko00001,ko01000,ko04147	glutamine synthetase
PHMCMLLI_01186	0.0	gltX	6.1.1.24	-	J	ko:K09698	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
PHMCMLLI_01187	1.23e-275	araT	2.6.1.57	-	E	ko:K00832,ko:K00841	ko00270,ko00300,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01230,map00270,map00300,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase
PHMCMLLI_01188	1.28e-18	-	-	-	-	-	-	-	-
PHMCMLLI_01189	7.19e-199	-	-	-	P	ko:K02073	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the nlpA lipoprotein family
PHMCMLLI_01190	1.99e-131	msrA	1.8.4.11	-	C	ko:K07304	-	ko00000,ko01000	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PHMCMLLI_01191	1.27e-66	yitW	-	-	S	-	-	-	Iron-sulfur cluster assembly protein
PHMCMLLI_01192	4.87e-203	-	-	-	-	-	-	-	-
PHMCMLLI_01193	1.56e-234	-	-	-	-	-	-	-	-
PHMCMLLI_01194	1.47e-116	-	-	-	S	-	-	-	Protein conserved in bacteria
PHMCMLLI_01197	1.4e-146	-	-	-	K	-	-	-	Transcriptional regulator
PHMCMLLI_01198	2.68e-67	rplU	-	-	J	ko:K02888	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein binds to 23S rRNA in the presence of protein L20
PHMCMLLI_01199	1.46e-71	ysxB	-	-	J	ko:K07584	-	ko00000	Cysteine protease Prp
PHMCMLLI_01200	5.07e-61	rpmA	-	-	J	ko:K02899	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL27 family
PHMCMLLI_01201	1.63e-171	-	-	-	S	ko:K06997	-	ko00000	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
PHMCMLLI_01202	5.24e-257	pepP	3.4.11.9, 3.4.13.9	-	E	ko:K01262,ko:K01271	-	ko00000,ko01000,ko01002	Creatinase/Prolidase N-terminal domain
PHMCMLLI_01203	8.59e-148	-	-	-	J	-	-	-	2'-5' RNA ligase superfamily
PHMCMLLI_01204	2.27e-93	WQ51_04310	-	-	S	ko:K10947	-	ko00000,ko03000	Asp23 family, cell envelope-related function
PHMCMLLI_01205	2.24e-92	nusB	-	-	K	ko:K03625	-	ko00000,ko03009,ko03021	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
PHMCMLLI_01206	2.29e-192	folD	1.5.1.5, 3.5.4.9	-	F	ko:K01491	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
PHMCMLLI_01207	4.75e-304	xseA	3.1.11.6	-	L	ko:K03601	ko03430,map03430	ko00000,ko00001,ko01000,ko03400	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PHMCMLLI_01208	4.02e-58	xseB	3.1.11.6	-	L	ko:K03602	ko03430,map03430	ko00000,ko00001,ko01000,ko03400	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PHMCMLLI_01209	9.88e-205	ispA	2.5.1.1, 2.5.1.10, 2.5.1.29	-	H	ko:K13789	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko01006	Belongs to the FPP GGPP synthase family
PHMCMLLI_01210	6.89e-192	rrmJ	2.1.1.226, 2.1.1.227	-	J	ko:K06442	-	ko00000,ko01000,ko03009	Ribosomal RNA large subunit methyltransferase J
PHMCMLLI_01211	1.11e-100	argR2	-	-	K	ko:K03402	-	ko00000,ko03000	Regulates arginine biosynthesis genes
PHMCMLLI_01212	0.0	recN	-	-	L	ko:K03631	-	ko00000,ko03400	May be involved in recombinational repair of damaged DNA
PHMCMLLI_01213	9e-72	-	-	-	-	-	-	-	-
PHMCMLLI_01214	4.37e-148	gmk	2.7.4.8	-	F	ko:K00942	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko00002,ko01000	Essential for recycling GMP and indirectly, cGMP
PHMCMLLI_01215	6.66e-43	rpoZ	2.7.7.6	-	K	ko:K03060	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
PHMCMLLI_01216	3.12e-273	coaBC	4.1.1.36, 6.3.2.5	-	H	ko:K01598,ko:K13038	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
PHMCMLLI_01217	0.0	priA	-	-	L	ko:K04066	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
PHMCMLLI_01218	1.74e-223	fmt	2.1.2.9	-	J	ko:K00604	ko00670,ko00970,map00670,map00970	ko00000,ko00001,ko01000	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
PHMCMLLI_01219	0.0	sun	2.1.1.176	-	J	ko:K03500	-	ko00000,ko01000,ko03009	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
PHMCMLLI_01220	4.26e-168	stp	3.1.3.16	-	T	ko:K20074	-	ko00000,ko01000,ko01009	phosphatase
PHMCMLLI_01221	0.0	prkC	2.7.11.1	-	KLT	ko:K08884,ko:K12132	-	ko00000,ko01000,ko01001	serine threonine protein kinase
PHMCMLLI_01222	3.75e-212	rsgA	3.1.3.100	-	S	ko:K06949	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000,ko03009	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
PHMCMLLI_01223	2.22e-151	rpe	5.1.3.1	-	G	ko:K01783	ko00030,ko00040,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the ribulose-phosphate 3-epimerase family
PHMCMLLI_01224	5.49e-156	thiN	2.7.6.2	-	H	ko:K00949	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000	thiamine pyrophosphokinase
PHMCMLLI_01225	9.04e-34	rpmB	-	-	J	ko:K02902	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL28 family
PHMCMLLI_01226	1.05e-77	yloU	-	-	S	-	-	-	Asp23 family, cell envelope-related function
PHMCMLLI_01227	0.0	yloV	-	-	S	ko:K07030	-	ko00000	DAK2 domain fusion protein YloV
PHMCMLLI_01228	0.0	recG	3.6.4.12	-	L	ko:K03655	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
PHMCMLLI_01229	5.75e-242	plsX	2.3.1.15	-	I	ko:K03621	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
PHMCMLLI_01230	1.81e-50	acpP	-	-	IQ	ko:K02078	-	ko00000,ko00001	Carrier of the growing fatty acid chain in fatty acid biosynthesis
PHMCMLLI_01231	1.57e-168	rnc	3.1.26.3	-	J	ko:K03685	ko03008,ko05205,map03008,map05205	ko00000,ko00001,ko01000,ko03009,ko03019,ko03036	Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
PHMCMLLI_01232	0.0	smc	-	-	D	ko:K03529	-	ko00000,ko03036	Required for chromosome condensation and partitioning
PHMCMLLI_01233	4.7e-283	ftsY	-	-	U	ko:K03110	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
PHMCMLLI_01234	4.94e-75	ylxM	-	-	S	ko:K09787	-	ko00000	Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
PHMCMLLI_01235	0.0	ffh	3.6.5.4	-	U	ko:K03106	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko01000,ko02044	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
PHMCMLLI_01236	1.21e-58	rpsP	-	-	J	ko:K02959	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Belongs to the bacterial ribosomal protein bS16 family
PHMCMLLI_01237	8.84e-52	ylqC	-	-	S	ko:K06960	-	ko00000	Belongs to the UPF0109 family
PHMCMLLI_01238	5.33e-119	rimM	-	-	J	ko:K02860	-	ko00000,ko03009	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
PHMCMLLI_01239	5.46e-183	trmD	2.1.1.228	-	J	ko:K00554	-	ko00000,ko01000,ko03016	Belongs to the RNA methyltransferase TrmD family
PHMCMLLI_01240	0.0	-	-	-	E	ko:K03294	-	ko00000	amino acid
PHMCMLLI_01241	3.75e-77	rplS	-	-	J	ko:K02884	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
PHMCMLLI_01242	4.26e-251	-	-	-	L	-	-	-	Transposase
PHMCMLLI_01243	2.87e-288	htrA	3.4.21.107	-	O	ko:K04771	ko01503,ko02020,map01503,map02020	ko00000,ko00001,ko00002,ko01000,ko01002,ko03110	serine protease
PHMCMLLI_01244	2.52e-196	vicX	3.1.26.11	-	S	ko:K00784	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	domain protein
PHMCMLLI_01245	2.49e-193	yycI	-	-	S	-	-	-	YycH protein
PHMCMLLI_01246	0.0	yycH	-	-	S	-	-	-	YycH protein
PHMCMLLI_01247	0.0	vicK	2.7.13.3	-	T	ko:K07652	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
PHMCMLLI_01248	1.29e-168	yycF	-	-	K	ko:K07668	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	response regulator
PHMCMLLI_01250	0.0	lmrA	3.6.3.44	-	V	ko:K02021,ko:K18104	ko01501,ko02010,map01501,map02010	ko00000,ko00001,ko00002,ko01000,ko01504,ko02000	ABC transporter
PHMCMLLI_01251	1.09e-95	-	-	-	K	ko:K18909	-	ko00000,ko00002,ko01504,ko03000	helix_turn_helix multiple antibiotic resistance protein
PHMCMLLI_01253	7.88e-158	-	-	-	S	-	-	-	Fic/DOC family
PHMCMLLI_01254	2.17e-209	-	-	-	S	-	-	-	Polyphosphate nucleotide phosphotransferase, PPK2 family
PHMCMLLI_01255	1.76e-77	-	-	-	-	-	-	-	-
PHMCMLLI_01256	2.54e-267	yttB	-	-	EGP	-	-	-	Major Facilitator
PHMCMLLI_01257	7.89e-305	dnaB	3.6.4.12	-	L	ko:K02314	ko03030,ko04112,map03030,map04112	ko00000,ko00001,ko01000,ko03032	Participates in initiation and elongation during chromosome replication
PHMCMLLI_01258	1.25e-97	rplI	-	-	J	ko:K02939	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to the 23S rRNA
PHMCMLLI_01259	0.0	yybT	-	-	T	-	-	-	signaling protein consisting of a modified GGDEF domain and a DHH domain
PHMCMLLI_01260	1.83e-130	deoR	-	-	K	ko:K05346	-	ko00000,ko03000	sugar-binding domain protein
PHMCMLLI_01261	2.02e-122	deoC	4.1.2.4	-	F	ko:K01619	ko00030,map00030	ko00000,ko00001,ko01000	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
PHMCMLLI_01262	0.0	-	2.4.1.5	GH13	G	ko:K00689	ko00500,ko02020,map00500,map02020	ko00000,ko00001,ko01000	Glycosyl hydrolase family 70
PHMCMLLI_01263	0.0	-	2.4.1.5	GH13	G	ko:K00689	ko00500,ko02020,map00500,map02020	ko00000,ko00001,ko01000	Glycosyl hydrolase family 70
PHMCMLLI_01264	5.66e-128	-	-	-	K	-	-	-	UTRA
PHMCMLLI_01265	1.43e-209	-	-	-	O	-	-	-	ADP-ribosylglycohydrolase
PHMCMLLI_01266	2.36e-306	-	-	-	F	ko:K03457	-	ko00000	Belongs to the purine-cytosine permease (2.A.39) family
PHMCMLLI_01267	8.62e-150	-	-	-	G	-	-	-	Belongs to the carbohydrate kinase PfkB family
PHMCMLLI_01268	1.6e-16	-	-	-	L	-	-	-	reverse transcriptase
PHMCMLLI_01269	5.62e-224	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
PHMCMLLI_01270	4.9e-206	akr5f	1.1.1.346	-	S	ko:K06221	-	ko00000,ko01000	reductase
PHMCMLLI_01271	8.12e-204	-	-	-	K	-	-	-	Transcriptional regulator
PHMCMLLI_01272	4.88e-236	ansA	3.5.1.1	-	EJ	ko:K01424	ko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110	ko00000,ko00001,ko01000	L-asparaginase, type I
PHMCMLLI_01273	3.88e-219	ypuA	-	-	S	-	-	-	Protein of unknown function (DUF1002)
PHMCMLLI_01274	1.31e-81	-	-	-	GM	-	-	-	NAD(P)H-binding
PHMCMLLI_01275	3.7e-123	-	-	-	K	-	-	-	Virulence activator alpha C-term
PHMCMLLI_01276	1.5e-121	padC	-	-	Q	ko:K13727	-	ko00000,ko01000	Phenolic acid decarboxylase
PHMCMLLI_01277	1.38e-193	-	-	-	S	-	-	-	Alpha beta hydrolase
PHMCMLLI_01278	5.38e-171	-	-	-	S	ko:K06889	-	ko00000	Hydrolases of the alpha beta superfamily
PHMCMLLI_01279	1.05e-113	-	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	transferase hexapeptide repeat
PHMCMLLI_01280	3.93e-190	lysR	-	-	K	-	-	-	Transcriptional regulator
PHMCMLLI_01281	0.0	-	-	-	L	-	-	-	PFAM transposase, IS4 family protein
PHMCMLLI_01282	5.62e-224	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
PHMCMLLI_01283	1.31e-139	-	-	-	M	-	-	-	Rib/alpha-like repeat
PHMCMLLI_01284	5.62e-224	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
PHMCMLLI_01285	0.0	-	-	-	L	-	-	-	Transposase
PHMCMLLI_01286	5.62e-224	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
PHMCMLLI_01288	5.84e-223	yjbO	5.4.99.23	-	G	ko:K06180	-	ko00000,ko01000,ko03009	Responsible for synthesis of pseudouridine from uracil
PHMCMLLI_01289	1.52e-198	nadK	2.7.1.23	-	F	ko:K00858	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
PHMCMLLI_01290	1.29e-150	yjbM	2.7.6.5	-	S	ko:K07816	ko00230,map00230	ko00000,ko00001,ko01000	RelA SpoT domain protein
PHMCMLLI_01291	1.4e-147	yjbH	-	-	Q	-	-	-	Thioredoxin
PHMCMLLI_01292	0.0	pepDA	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
PHMCMLLI_01293	3.84e-261	coiA	-	-	S	ko:K06198	-	ko00000	Competence protein
PHMCMLLI_01294	1.06e-281	-	-	-	L	ko:K07487	-	ko00000	Transposase
PHMCMLLI_01295	2.02e-170	fabI	1.3.1.10, 1.3.1.9	-	I	ko:K00208	ko00061,ko00333,ko00780,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Enoyl- acyl-carrier-protein reductase NADH
PHMCMLLI_01296	3.96e-179	accA	2.1.3.15, 6.4.1.2	-	I	ko:K01962	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002,ko01000	alpha subunit
PHMCMLLI_01297	5.91e-184	accD	2.1.3.15, 6.4.1.2	-	I	ko:K01963	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002,ko01000	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
PHMCMLLI_01298	0.0	accC	6.3.4.14, 6.4.1.2	-	I	ko:K01961	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002,ko01000	Acetyl-CoA carboxylase biotin carboxylase subunit
PHMCMLLI_01299	5.61e-98	fabZ	4.2.1.59	-	I	ko:K02372	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
PHMCMLLI_01300	5.1e-97	accB	-	-	I	ko:K02160	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002	first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
PHMCMLLI_01301	9.95e-286	fabF	2.3.1.179	-	I	ko:K09458	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
PHMCMLLI_01302	7.08e-166	fabG	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	reductase
PHMCMLLI_01303	2.55e-199	fabD	2.3.1.39	-	I	ko:K00645,ko:K15327,ko:K15329	ko00061,ko00333,ko01100,ko01130,ko01212,map00061,map00333,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004,ko01008	Malonyl CoA-acyl carrier protein transacylase
PHMCMLLI_01304	2.51e-47	acpP	-	-	IQ	ko:K02078	-	ko00000,ko00001	Carrier of the growing fatty acid chain in fatty acid biosynthesis
PHMCMLLI_01305	5.4e-226	fabH	2.3.1.180	-	I	ko:K00648	ko00061,ko01100,ko01212,map00061,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
PHMCMLLI_01306	2.35e-101	-	-	-	K	-	-	-	Transcriptional regulator, MarR family
PHMCMLLI_01307	5.06e-94	fabZ	4.2.1.59	-	I	ko:K02372	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
PHMCMLLI_01309	3.42e-258	xerS	-	-	L	-	-	-	Belongs to the 'phage' integrase family
PHMCMLLI_01310	6.2e-314	sacB	2.4.1.10, 2.4.1.9	GH68	M	ko:K00692,ko:K20811	ko00500,ko01100,ko02020,map00500,map01100,map02020	ko00000,ko00001,ko01000,ko01003	Levansucrase/Invertase
PHMCMLLI_01311	1.78e-204	rssA	-	-	S	-	-	-	Phospholipase, patatin family
PHMCMLLI_01312	1.15e-152	-	-	-	L	-	-	-	Integrase
PHMCMLLI_01313	8e-198	-	-	-	EG	-	-	-	EamA-like transporter family
PHMCMLLI_01314	4.68e-168	narI	1.7.5.1	-	C	ko:K00374	ko00910,ko01120,ko02020,map00910,map01120,map02020	ko00000,ko00001,ko00002,ko01000	Nitrate reductase
PHMCMLLI_01315	2.44e-129	narJ	-	-	C	ko:K00373	ko02020,map02020	ko00000,ko00001	nitrate reductase molybdenum cofactor assembly chaperone
PHMCMLLI_01316	0.0	narH	1.7.5.1	-	C	ko:K00371	ko00910,ko01120,ko02020,map00910,map01120,map02020	ko00000,ko00001,ko00002,ko01000	4Fe-4S dicluster domain
PHMCMLLI_01317	0.0	narZ	1.7.5.1	-	C	ko:K00370	ko00910,ko01120,ko02020,map00910,map01120,map02020	ko00000,ko00001,ko00002,ko01000	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
PHMCMLLI_01318	3.55e-234	moeB	2.7.7.80	-	H	ko:K21029	ko04122,map04122	ko00000,ko00001,ko01000	ThiF family
PHMCMLLI_01319	2.09e-110	moaB	2.7.7.75	-	H	ko:K03638	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko01000	May be involved in the biosynthesis of molybdopterin
PHMCMLLI_01320	4.74e-286	moeA	2.10.1.1	-	H	ko:K03750	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko01000	MoeA N-terminal region (domain I and II)
PHMCMLLI_01321	1.3e-96	mobB	-	-	H	ko:K03753	-	ko00000	molybdopterin-guanine dinucleotide biosynthesis protein
PHMCMLLI_01322	1.52e-122	mobA	2.7.7.77	-	H	ko:K03752	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko01000	Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor
PHMCMLLI_01323	1.76e-57	-	-	-	-	-	-	-	-
PHMCMLLI_01324	4.45e-232	nreB	2.7.13.3	-	F	ko:K07683	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Sensor histidine kinase
PHMCMLLI_01325	5.03e-148	nreC	-	-	K	ko:K07696	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	PFAM regulatory protein LuxR
PHMCMLLI_01327	1.88e-225	-	-	-	-	-	-	-	-
PHMCMLLI_01328	6.62e-186	-	-	-	H	-	-	-	geranyltranstransferase activity
PHMCMLLI_01329	1.68e-275	narK	-	-	P	ko:K02575	ko00910,map00910	ko00000,ko00001,ko00002,ko02000	Transporter, major facilitator family protein
PHMCMLLI_01330	6.23e-43	moaD	-	-	H	ko:K03636	ko04122,map04122	ko00000,ko00001	ThiS family
PHMCMLLI_01331	8.96e-82	moaE	2.8.1.12	-	H	ko:K03635,ko:K21142	ko00790,ko01100,ko04122,map00790,map01100,map04122	ko00000,ko00001,ko01000	MoaE protein
PHMCMLLI_01332	5.33e-103	-	-	-	S	-	-	-	Flavodoxin
PHMCMLLI_01333	2.5e-163	fecD	-	-	P	ko:K02015	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PHMCMLLI_01334	9.41e-162	fecE	3.6.3.34	-	HP	ko:K02013	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	AAA domain, putative AbiEii toxin, Type IV TA system
PHMCMLLI_01335	1.36e-222	fecB	-	-	P	ko:K02016	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Periplasmic binding protein
PHMCMLLI_01336	2.47e-224	-	-	-	-	-	-	-	-
PHMCMLLI_01337	7.69e-100	-	-	-	-	-	-	-	-
PHMCMLLI_01338	3.12e-148	-	-	-	K	ko:K21562	-	ko00000,ko03000	Transcriptional regulator, Crp Fnr family
PHMCMLLI_01339	0.0	-	-	-	S	-	-	-	SEC-C Motif Domain Protein
PHMCMLLI_01340	1.23e-67	-	-	-	-	-	-	-	-
PHMCMLLI_01341	7.92e-180	thiM	2.7.1.50	-	H	ko:K00878	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
PHMCMLLI_01342	1.5e-190	thiD	2.7.1.49, 2.7.4.7	-	H	ko:K00941	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Phosphomethylpyrimidine kinase
PHMCMLLI_01343	3.85e-151	thiE	2.5.1.3	-	H	ko:K00788	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)
PHMCMLLI_01344	8.33e-294	-	-	-	P	-	-	-	Chloride transporter, ClC family
PHMCMLLI_01345	0.0	agl	3.2.1.20	GH31	G	ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 31 family
PHMCMLLI_01346	6.6e-142	-	-	-	I	-	-	-	Acid phosphatase homologues
PHMCMLLI_01347	1.06e-281	-	-	-	L	ko:K07487	-	ko00000	Transposase
PHMCMLLI_01349	1.83e-21	-	-	-	-	-	-	-	-
PHMCMLLI_01350	5e-309	glpT	-	-	G	ko:K02445	-	ko00000,ko02000	Major Facilitator Superfamily
PHMCMLLI_01351	4.72e-134	clpP	3.4.21.92	-	O	ko:K01358	ko04112,ko04212,map04112,map04212	ko00000,ko00001,ko01000,ko01002	Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
PHMCMLLI_01353	1.31e-243	gap	1.2.1.12	-	G	ko:K00134	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
PHMCMLLI_01354	7.62e-290	pgk	2.7.2.3	-	F	ko:K00927	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the phosphoglycerate kinase family
PHMCMLLI_01355	2.51e-182	tpiA	5.3.1.1	-	G	ko:K01803	ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
PHMCMLLI_01356	0.0	eno	4.2.1.11	-	G	ko:K01689	ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066	ko00000,ko00001,ko00002,ko01000,ko03019,ko04147	Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
PHMCMLLI_01357	0.0	yifK	-	-	E	ko:K03293	-	ko00000	Amino acid permease
PHMCMLLI_01358	0.0	eriC	-	-	P	ko:K03281	-	ko00000	chloride
PHMCMLLI_01359	5.82e-47	secG	-	-	U	ko:K03075	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Preprotein translocase
PHMCMLLI_01360	3.43e-189	est	3.1.1.1	-	S	ko:K03928	-	ko00000,ko01000	Serine aminopeptidase, S33
PHMCMLLI_01361	0.0	rnr	-	-	J	ko:K12573	ko03018,map03018	ko00000,ko00001,ko01000,ko03016,ko03019	3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
PHMCMLLI_01362	4.47e-108	smpB	-	-	J	ko:K03664	-	ko00000	the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
PHMCMLLI_01363	1.36e-136	-	-	-	-	-	-	-	-
PHMCMLLI_01364	1.07e-173	ung	3.2.2.27	-	L	ko:K03648	ko03410,ko05340,map03410,map05340	ko00000,ko00001,ko01000,ko03400	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
PHMCMLLI_01365	1.38e-228	pta	2.3.1.8, 3.6.3.21	-	C	ko:K00625,ko:K02028	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000,ko02000	phosphate acetyltransferase
PHMCMLLI_01366	1.71e-105	ydiB	-	-	O	ko:K06925	-	ko00000,ko03016	Hydrolase, P-loop family
PHMCMLLI_01367	6.2e-114	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
PHMCMLLI_01368	6.13e-100	XK27_04775	-	-	S	ko:K09155	-	ko00000	PAS domain
PHMCMLLI_01369	3.7e-133	dnaQ	2.7.7.7	-	L	ko:K02342	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III
PHMCMLLI_01370	1.94e-215	murB	1.3.1.98	-	M	ko:K00075	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation
PHMCMLLI_01371	1.31e-213	rbsK	2.7.1.15	-	H	ko:K00852	ko00030,map00030	ko00000,ko00001,ko01000	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PHMCMLLI_01372	1.01e-87	rbsD	5.4.99.62	-	G	ko:K06726	ko02010,map02010	ko00000,ko00001,ko01000	Catalyzes the interconversion of beta-pyran and beta- furan forms of D-ribose
PHMCMLLI_01373	0.0	fucP	-	-	G	ko:K02429	-	ko00000,ko02000	Major Facilitator Superfamily
PHMCMLLI_01374	6.61e-195	dacA	2.7.7.85	-	S	ko:K18672	-	ko00000,ko01000	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
PHMCMLLI_01375	1.11e-164	ybbR	-	-	S	-	-	-	YbbR-like protein
PHMCMLLI_01376	0.0	glmM	5.4.2.10	-	G	ko:K03431	ko00520,ko01100,ko01130,map00520,map01100,map01130	ko00000,ko00001,ko01000	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
PHMCMLLI_01377	0.0	glmS	2.6.1.16	-	M	ko:K00820	ko00250,ko00520,ko01100,ko01130,ko04931,map00250,map00520,map01100,map01130,map04931	ko00000,ko00001,ko01000,ko01002	Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
PHMCMLLI_01378	5.17e-70	-	-	-	-	-	-	-	-
PHMCMLLI_01379	0.0	oatA	-	-	I	-	-	-	Acyltransferase
PHMCMLLI_01380	3.7e-106	-	-	-	K	-	-	-	Transcriptional regulator
PHMCMLLI_01381	5.69e-193	-	-	-	S	-	-	-	Cof-like hydrolase
PHMCMLLI_01382	2.2e-110	lytE	-	-	M	-	-	-	Lysin motif
PHMCMLLI_01384	9.42e-173	yclJ	-	-	K	ko:K02483	-	ko00000,ko02022	response regulator
PHMCMLLI_01385	0.0	yclK	-	-	T	-	-	-	Histidine kinase
PHMCMLLI_01386	1.91e-200	-	-	-	U	ko:K05340	-	ko00000,ko02000	sugar transport
PHMCMLLI_01387	1.64e-142	maa3	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	transferase hexapeptide repeat
PHMCMLLI_01388	0.0	pgi	5.3.1.9	-	G	ko:K01810	ko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the GPI family
PHMCMLLI_01389	2.49e-39	-	-	-	-	-	-	-	-
PHMCMLLI_01390	1.83e-277	xylR	-	-	GK	-	-	-	ROK family
PHMCMLLI_01392	1.06e-281	-	-	-	L	ko:K07487	-	ko00000	Transposase
PHMCMLLI_01393	9.21e-200	holA	2.7.7.7	-	L	ko:K02340	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III delta subunit
PHMCMLLI_01394	0.0	comEC	-	-	S	ko:K02238	-	ko00000,ko00002,ko02044	Competence protein ComEC
PHMCMLLI_01395	1.43e-115	comEB	3.5.4.12	-	F	ko:K01493	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko02044	ComE operon protein 2
PHMCMLLI_01396	5.03e-140	comEA	-	-	L	ko:K02237	-	ko00000,ko00002,ko02044	Competence protein ComEA
PHMCMLLI_01397	5.2e-253	lon	-	-	T	ko:K07177	ko02024,map02024	ko00000,ko00001,ko01002	Belongs to the peptidase S16 family
PHMCMLLI_01398	6.15e-116	coaD	2.7.7.3	-	H	ko:K00954	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
PHMCMLLI_01399	1.95e-128	rsmD	2.1.1.171	-	L	ko:K08316	-	ko00000,ko01000,ko03009	RNA methyltransferase, RsmD family
PHMCMLLI_01400	9.06e-60	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2129)
PHMCMLLI_01401	1.3e-284	ftsW	-	-	D	ko:K03588	ko04112,map04112	ko00000,ko00001,ko02000,ko03036	Belongs to the SEDS family
PHMCMLLI_01402	0.0	typA	-	-	T	ko:K06207	-	ko00000	GTP-binding protein TypA
PHMCMLLI_01403	2.37e-175	suhB	3.1.3.25	-	G	ko:K01092	ko00521,ko00562,ko01100,ko04070,map00521,map00562,map01100,map04070	ko00000,ko00001,ko00002,ko01000	Belongs to the inositol monophosphatase superfamily
PHMCMLLI_01404	2.02e-62	yktA	-	-	S	-	-	-	Belongs to the UPF0223 family
PHMCMLLI_01405	0.0	pdhD	1.8.1.4	-	C	ko:K00382	ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000,ko04147	Dehydrogenase
PHMCMLLI_01406	4.3e-311	pdhC	2.3.1.12	-	C	ko:K00627	ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
PHMCMLLI_01407	3.28e-232	pdhB	1.2.4.1	-	C	ko:K00162	ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04922,ko05230,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200,map04066,map04922,map05230	br01601,ko00000,ko00001,ko00002,ko01000	Transketolase, C-terminal domain protein
PHMCMLLI_01408	4.05e-266	pdhA	1.2.4.1	-	C	ko:K00161	ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04922,ko05230,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200,map04066,map04922,map05230	br01601,ko00000,ko00001,ko00002,ko01000	Dehydrogenase E1 component
PHMCMLLI_01409	1.68e-133	def	3.5.1.88	-	J	ko:K01462	-	ko00000,ko01000	Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
PHMCMLLI_01410	2.79e-107	-	-	-	-	-	-	-	-
PHMCMLLI_01411	9.99e-44	ykzG	-	-	S	-	-	-	Belongs to the UPF0356 family
PHMCMLLI_01412	2.71e-235	-	-	-	I	-	-	-	Diacylglycerol kinase catalytic
PHMCMLLI_01413	4.37e-39	-	-	-	-	-	-	-	-
PHMCMLLI_01414	9.12e-225	-	-	-	M	ko:K21471	-	ko00000,ko01000,ko01002,ko01011	NlpC P60 family protein
PHMCMLLI_01416	2.15e-75	-	-	-	-	-	-	-	-
PHMCMLLI_01417	8.8e-264	glxK	2.7.1.165	-	G	ko:K00865	ko00260,ko00561,ko00630,ko01100,ko01120,ko01130,map00260,map00561,map00630,map01100,map01120,map01130	ko00000,ko00001,ko01000	Belongs to the glycerate kinase type-1 family
PHMCMLLI_01418	2.31e-281	yojA	-	-	EG	ko:K03299	-	ko00000,ko02000	GntP family permease
PHMCMLLI_01419	2.32e-103	-	-	-	KT	ko:K02647	-	ko00000,ko03000	Putative sugar diacid recognition
PHMCMLLI_01420	1.49e-253	asd	1.2.1.11	-	E	ko:K00133	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
PHMCMLLI_01421	8.39e-279	aspC	-	-	E	ko:K00841	ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase
PHMCMLLI_01422	1.49e-179	dapB	1.17.1.8	-	E	ko:K00215	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
PHMCMLLI_01423	5.62e-224	dapA	4.3.3.7	-	E	ko:K01714	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
PHMCMLLI_01424	9.46e-283	hipO	3.5.1.47	-	E	ko:K05823	ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000,ko01002	Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
PHMCMLLI_01425	1.32e-111	dapH	2.3.1.117, 2.3.1.89	-	E	ko:K00674,ko:K05822	ko00300,ko01100,ko01110,ko01120,ko01230,map00300,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
PHMCMLLI_01426	1.24e-315	lysA	4.1.1.20	-	E	ko:K01586	ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
PHMCMLLI_01427	0.0	lysC	2.7.2.4	-	E	ko:K00928	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the aspartokinase family
PHMCMLLI_01428	5.55e-223	dapF	5.1.1.7	-	E	ko:K01778	ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
PHMCMLLI_01429	1.48e-223	prs2	2.7.6.1	-	F	ko:K00948	ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PHMCMLLI_01430	0.0	recD2	3.1.11.5	-	L	ko:K03581	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
PHMCMLLI_01431	3.82e-157	-	-	-	S	-	-	-	repeat protein
PHMCMLLI_01432	4.69e-158	pgm6	-	-	G	-	-	-	phosphoglycerate mutase
PHMCMLLI_01433	2.15e-286	mnmA	2.8.1.13	-	J	ko:K00566	ko04122,map04122	ko00000,ko00001,ko01000,ko03016	Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
PHMCMLLI_01434	5.58e-76	XK27_04120	-	-	S	-	-	-	Putative amino acid metabolism
PHMCMLLI_01435	1.1e-278	iscS	2.8.1.7	-	E	ko:K04487	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko02048,ko03016,ko03029	Aminotransferase class V
PHMCMLLI_01436	3.4e-162	mtnN	3.2.2.9	-	E	ko:K01243	ko00270,ko01100,ko01230,map00270,map01100,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
PHMCMLLI_01437	1.54e-33	-	-	-	-	-	-	-	-
PHMCMLLI_01438	1.01e-128	nudF	3.6.1.13	-	L	ko:K01515	ko00230,map00230	ko00000,ko00001,ko01000	ADP-ribose pyrophosphatase
PHMCMLLI_01439	5.69e-44	cspB	-	-	K	ko:K03704	-	ko00000,ko03000	Cold shock protein
PHMCMLLI_01440	0.0	ileS	6.1.1.5	-	J	ko:K01870	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
PHMCMLLI_01441	8.67e-108	divIVA	-	-	D	ko:K04074	-	ko00000,ko03036	DivIVA domain protein
PHMCMLLI_01442	3.05e-189	ylmH	-	-	S	-	-	-	S4 domain protein
PHMCMLLI_01443	3.2e-54	ylmG	-	-	S	ko:K02221	-	ko00000,ko02044	YGGT family
PHMCMLLI_01444	1.11e-92	sepF	-	-	D	ko:K09772	-	ko00000,ko03036	Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
PHMCMLLI_01445	6.52e-289	ftsZ	-	-	D	ko:K03531	ko04112,map04112	ko00000,ko00001,ko02048,ko03036,ko04812	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
PHMCMLLI_01446	0.0	ftsA	-	-	D	ko:K03590	ko04112,map04112	ko00000,ko00001,ko03036,ko04812	Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
PHMCMLLI_01447	7.99e-191	divIB	-	-	D	ko:K03589	ko04112,map04112	ko00000,ko00001,ko03036	Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
PHMCMLLI_01448	2.07e-260	murG	2.4.1.227	GT28	M	ko:K02563	ko00550,ko01100,ko01502,ko04112,map00550,map01100,map01502,map04112	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
PHMCMLLI_01449	0.0	murD	6.3.2.9	-	M	ko:K01925	ko00471,ko00550,ko01100,map00471,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
PHMCMLLI_01450	3.83e-230	mraY	2.7.8.13	-	M	ko:K01000	ko00550,ko01100,ko01502,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
PHMCMLLI_01451	0.0	pbpX	-	-	M	ko:K08724,ko:K12552,ko:K12556	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01011	Penicillin-binding Protein
PHMCMLLI_01452	5.99e-74	ftsL	-	-	D	-	-	-	Cell division protein FtsL
PHMCMLLI_01453	1.54e-222	rsmH	2.1.1.199	-	J	ko:K03438	-	ko00000,ko01000,ko03009	Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
PHMCMLLI_01454	1.5e-101	mraZ	-	-	K	ko:K03925	-	ko00000	Belongs to the MraZ family
PHMCMLLI_01455	6.9e-77	-	-	-	-	-	-	-	-
PHMCMLLI_01456	4.47e-16	-	-	-	S	-	-	-	Protein of unknown function (DUF4044)
PHMCMLLI_01457	0.0	ftsK	-	-	D	ko:K03466	-	ko00000,ko03036	Belongs to the FtsK SpoIIIE SftA family
PHMCMLLI_01458	3.75e-124	cspR	2.1.1.207	-	J	ko:K03216	-	ko00000,ko01000,ko03016	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
PHMCMLLI_01459	4.72e-205	rrmA	2.1.1.187	-	H	ko:K00563,ko:K10947	-	ko00000,ko01000,ko03000,ko03009	Methyltransferase
PHMCMLLI_01460	1.61e-252	pgl	3.1.1.31	-	G	ko:K07404	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Lactonase, 7-bladed beta-propeller
PHMCMLLI_01462	1.82e-86	XK27_01125	-	-	L	ko:K07484	-	ko00000	PFAM IS66 Orf2 family protein
PHMCMLLI_01463	1.06e-281	-	-	-	L	ko:K07487	-	ko00000	Transposase
PHMCMLLI_01464	0.0	menE	6.2.1.26	-	H	ko:K01911	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Belongs to the ATP-dependent AMP-binding enzyme family. MenE subfamily
PHMCMLLI_01465	6.96e-201	menB	4.1.3.36	-	H	ko:K01661	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
PHMCMLLI_01466	5.31e-82	yuxO	-	-	Q	-	-	-	Thioesterase superfamily
PHMCMLLI_01467	3.51e-142	yvrI	-	-	K	ko:K03091,ko:K03093	-	ko00000,ko03021	sigma factor activity
PHMCMLLI_01468	3.07e-265	-	-	-	G	-	-	-	Transporter, major facilitator family protein
PHMCMLLI_01469	0.0	yfhO	-	-	S	-	-	-	Bacterial membrane protein YfhO
PHMCMLLI_01470	5.2e-146	-	-	-	T	ko:K10716	-	ko00000,ko02000	Ion transport 2 domain protein
PHMCMLLI_01471	2.72e-102	ribH	2.5.1.78	-	H	ko:K00794	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin
PHMCMLLI_01472	2.95e-283	ribBA	3.5.4.25, 4.1.99.12	-	H	ko:K14652	ko00740,ko00790,ko01100,ko01110,map00740,map00790,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate
PHMCMLLI_01473	3.16e-129	ribE	2.5.1.9	-	H	ko:K00793	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Riboflavin synthase
PHMCMLLI_01474	3.04e-237	ribD	1.1.1.193, 3.5.4.26	-	H	ko:K11752	ko00740,ko01100,ko01110,ko02024,map00740,map01100,map01110,map02024	ko00000,ko00001,ko00002,ko01000	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
PHMCMLLI_01475	5.67e-232	rihA	-	-	F	ko:K01250	-	ko00000,ko01000	Inosine-uridine preferring nucleoside hydrolase
PHMCMLLI_01477	0.0	-	-	-	L	-	-	-	PLD-like domain
PHMCMLLI_01478	5.85e-24	-	-	-	-	-	-	-	-
PHMCMLLI_01479	1.98e-44	higA	-	-	K	ko:K21498	-	ko00000,ko02048	addiction module antidote protein HigA
PHMCMLLI_01481	3.22e-104	-	-	-	S	-	-	-	Protein of unknown function (DUF805)
PHMCMLLI_01482	1.26e-60	-	-	-	-	-	-	-	-
PHMCMLLI_01483	0.0	nylA	3.5.1.4	-	J	ko:K01426	ko00330,ko00360,ko00380,ko00627,ko00643,ko01120,map00330,map00360,map00380,map00627,map00643,map01120	ko00000,ko00001,ko01000	Belongs to the amidase family
PHMCMLLI_01484	3.8e-63	-	-	-	-	-	-	-	-
PHMCMLLI_01485	2.93e-125	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
PHMCMLLI_01486	0.0	gntK	2.7.1.12	-	G	ko:K00851	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko01000	Belongs to the FGGY kinase family
PHMCMLLI_01487	2.81e-297	gntP	-	-	EG	ko:K03299	-	ko00000,ko02000	Gluconate
PHMCMLLI_01488	1.92e-238	-	-	-	K	ko:K02525	-	ko00000,ko03000	Transcriptional regulator, LacI family
PHMCMLLI_01489	0.0	gntK	2.7.1.12	-	G	ko:K00851	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko01000	Belongs to the FGGY kinase family
PHMCMLLI_01490	5.41e-123	-	-	-	-	-	-	-	-
PHMCMLLI_01491	1.04e-33	-	-	-	-	-	-	-	-
PHMCMLLI_01492	8.08e-83	asp1	-	-	S	-	-	-	Asp23 family, cell envelope-related function
PHMCMLLI_01493	5.59e-119	ywnH	2.3.1.183	-	M	ko:K03823	ko00440,ko01130,map00440,map01130	ko00000,ko00001,ko01000	Acetyltransferase (GNAT) domain
PHMCMLLI_01495	9.14e-66	-	-	-	-	-	-	-	-
PHMCMLLI_01496	7.42e-89	-	-	-	S	-	-	-	Belongs to the HesB IscA family
PHMCMLLI_01497	8.96e-223	ppaC	3.6.1.1	-	C	ko:K15986	ko00190,map00190	ko00000,ko00001,ko01000	inorganic pyrophosphatase
PHMCMLLI_01498	4e-110	-	-	-	F	-	-	-	NUDIX domain
PHMCMLLI_01499	0.0	parC	-	-	L	ko:K02621	-	ko00000,ko01000,ko02048,ko03032,ko03036	Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PHMCMLLI_01500	0.0	parE	-	-	L	ko:K02622	-	ko00000,ko01000,ko02048,ko03032,ko03036	Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PHMCMLLI_01501	1.9e-139	plsY	2.3.1.15	-	I	ko:K08591	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
PHMCMLLI_01502	5.16e-217	lacX	5.1.3.3	-	G	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Aldose 1-epimerase
PHMCMLLI_01503	0.0	topA	5.99.1.2	-	L	ko:K03168	-	ko00000,ko01000,ko03032,ko03400	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
PHMCMLLI_01504	2.25e-206	dprA	-	-	LU	ko:K04096	-	ko00000	DNA protecting protein DprA
PHMCMLLI_01505	1.75e-181	rnhB	3.1.26.4	-	L	ko:K03470	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PHMCMLLI_01506	5.1e-207	rbgA	-	-	S	ko:K14540	-	ko00000,ko03009	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
PHMCMLLI_01507	1.33e-47	yozE	-	-	S	-	-	-	Belongs to the UPF0346 family
PHMCMLLI_01508	4.05e-141	ypmS	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2140)
PHMCMLLI_01509	2.77e-220	-	-	-	E	-	-	-	lipolytic protein G-D-S-L family
PHMCMLLI_01510	1.1e-196	WQ51_01275	-	-	S	-	-	-	EDD domain protein, DegV family
PHMCMLLI_01511	2.59e-144	hlyIII	-	-	S	ko:K11068	-	ko00000,ko02042	protein, hemolysin III
PHMCMLLI_01512	1.67e-119	folA	1.5.1.3	-	H	ko:K00287	ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523	ko00000,ko00001,ko00002,ko01000	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
PHMCMLLI_01513	6.24e-248	thyA	2.1.1.45	-	F	ko:K00560	ko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523	ko00000,ko00001,ko00002,ko01000	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
PHMCMLLI_01514	0.0	yfmR	-	-	S	ko:K15738	-	ko00000,ko02000	ABC transporter, ATP-binding protein
PHMCMLLI_01515	2.98e-288	cca	2.7.7.72	-	J	ko:K00974	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
PHMCMLLI_01516	3.87e-300	XK27_05225	-	-	S	-	-	-	Tetratricopeptide repeat protein
PHMCMLLI_01517	1.6e-54	hup	-	-	L	ko:K03530	-	ko00000,ko03032,ko03036,ko03400	Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
PHMCMLLI_01518	0.0	der	-	-	S	ko:K03977	-	ko00000,ko03009	GTPase that plays an essential role in the late steps of ribosome biogenesis
PHMCMLLI_01519	1.49e-274	rpsA	-	-	J	ko:K02945	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein S1
PHMCMLLI_01520	3.8e-153	cmk	2.7.4.25	-	F	ko:K00945	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the cytidylate kinase family. Type 1 subfamily
PHMCMLLI_01521	2.15e-83	-	-	-	M	-	-	-	Lysin motif
PHMCMLLI_01522	0.0	recQ	3.6.4.12	-	L	ko:K03654	ko03018,map03018	ko00000,ko00001,ko01000,ko03400	ATP-dependent DNA helicase RecQ
PHMCMLLI_01523	3.77e-246	-	-	-	S	-	-	-	Helix-turn-helix domain
PHMCMLLI_01524	2.65e-133	ribU	-	-	U	-	-	-	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
PHMCMLLI_01525	1.43e-164	rluB	5.4.99.22	-	J	ko:K06178	-	ko00000,ko01000,ko03009	Belongs to the pseudouridine synthase RsuA family
PHMCMLLI_01526	5.49e-135	scpB	-	-	D	ko:K06024	-	ko00000,ko03036	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
PHMCMLLI_01527	1.37e-177	scpA	-	-	D	ko:K05896	-	ko00000,ko03036	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
PHMCMLLI_01528	4.29e-85	ribT	-	-	K	ko:K02859	-	ko00000	COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PHMCMLLI_01529	4.23e-214	xerD	-	-	D	ko:K04763	-	ko00000,ko03036	recombinase XerD
PHMCMLLI_01530	2.27e-216	yitL	-	-	S	ko:K00243	-	ko00000	S1 domain
PHMCMLLI_01531	0.0	pyk	2.7.1.40	-	G	ko:K00873	ko00010,ko00230,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko04930,ko05165,ko05203,ko05230,map00010,map00230,map00620,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map04930,map05165,map05203,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Belongs to the pyruvate kinase family
PHMCMLLI_01532	0.0	dnaE	2.7.7.7	-	L	ko:K02337	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase
PHMCMLLI_01533	7.81e-42	-	-	-	S	-	-	-	Protein of unknown function (DUF2929)
PHMCMLLI_01534	9.12e-301	pepT	3.4.11.4	-	E	ko:K01258	-	ko00000,ko01000,ko01002	Cleaves the N-terminal amino acid of tripeptides
PHMCMLLI_01535	2.16e-200	yqfO	-	-	S	-	-	-	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
PHMCMLLI_01536	1.01e-165	trmK	2.1.1.217	-	S	ko:K06967	-	ko00000,ko01000,ko03016	SAM-dependent methyltransferase
PHMCMLLI_01537	1.24e-280	aspC	-	-	E	ko:K00841	ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase
PHMCMLLI_01538	2.54e-266	sigA	-	-	K	ko:K03086	-	ko00000,ko03021	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
PHMCMLLI_01539	0.0	dnaG	-	-	L	ko:K02316	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
PHMCMLLI_01540	0.0	glyS	6.1.1.14	-	J	ko:K01879	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Glycyl-tRNA synthetase beta subunit
PHMCMLLI_01541	2.14e-234	glyQ	6.1.1.14	-	J	ko:K01878	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	glycyl-tRNA synthetase alpha subunit
PHMCMLLI_01542	1.24e-188	recO	-	-	L	ko:K03584	ko03440,map03440	ko00000,ko00001,ko03400	Involved in DNA repair and RecF pathway recombination
PHMCMLLI_01543	2.66e-219	era	-	-	S	ko:K03595	-	ko00000,ko03009,ko03029	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
PHMCMLLI_01544	7.35e-81	dgkA	2.7.1.107, 2.7.1.66	-	M	ko:K00887,ko:K00901	ko00550,ko00561,ko00564,ko01100,ko01110,ko04070,ko04072,ko05231,map00550,map00561,map00564,map01100,map01110,map04070,map04072,map05231	ko00000,ko00001,ko01000	Diacylglycerol kinase
PHMCMLLI_01545	2.58e-108	ybeY	-	-	S	ko:K07042	-	ko00000,ko03009	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
PHMCMLLI_01546	3.7e-234	phoH	-	-	T	ko:K06217	-	ko00000	phosphate starvation-inducible protein PhoH
PHMCMLLI_01547	4.28e-227	birA	6.3.4.15	-	H	ko:K03524	ko00780,ko01100,map00780,map01100	ko00000,ko00001,ko01000,ko03000	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
PHMCMLLI_01548	1.78e-121	bioY	-	-	S	ko:K03523	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	BioY family
PHMCMLLI_01549	0.0	argH	4.3.2.1	-	E	ko:K01755	ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,map00220,map00250,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	argininosuccinate lyase
PHMCMLLI_01550	3.44e-302	argG	6.3.4.5	-	E	ko:K01940	ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,ko05418,map00220,map00250,map01100,map01110,map01130,map01230,map05418	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the argininosuccinate synthase family. Type 1 subfamily
PHMCMLLI_01551	1.2e-234	cbh	3.5.1.24	-	M	ko:K01442	ko00120,ko00121,ko01100,map00120,map00121,map01100	ko00000,ko00001,ko01000	Linear amide C-N hydrolase, choloylglycine hydrolase family protein
PHMCMLLI_01552	5.22e-80	yqeY	-	-	S	ko:K09117	-	ko00000	YqeY-like protein
PHMCMLLI_01553	1e-31	rpsU	-	-	J	ko:K02970	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bS21 family
PHMCMLLI_01554	0.0	glnPH2	-	-	P	ko:K02029,ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter permease
PHMCMLLI_01555	1.09e-170	glnQ	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
PHMCMLLI_01556	0.0	aspS	6.1.1.12	-	J	ko:K01876	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
PHMCMLLI_01557	4.78e-217	-	-	-	G	-	-	-	Phosphotransferase enzyme family
PHMCMLLI_01558	1.54e-100	dtd	-	-	J	ko:K07560	-	ko00000,ko01000,ko03016	rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
PHMCMLLI_01559	0.0	relA	2.7.6.5	-	KT	ko:K00951	ko00230,map00230	ko00000,ko00001,ko01000	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
PHMCMLLI_01560	1.32e-69	-	-	-	-	-	-	-	-
PHMCMLLI_01561	1.94e-164	rsmE	2.1.1.193	-	J	ko:K09761	-	ko00000,ko01000,ko03009	Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
PHMCMLLI_01562	2.58e-226	prmA	-	-	J	ko:K02687	-	ko00000,ko01000,ko03009	Ribosomal protein L11 methyltransferase
PHMCMLLI_01563	7.92e-76	-	-	-	-	-	-	-	-
PHMCMLLI_01565	1.37e-221	ldh	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	Belongs to the LDH MDH superfamily. LDH family
PHMCMLLI_01566	1.44e-254	-	-	-	C	-	-	-	Belongs to the LDH2 MDH2 oxidoreductase family
PHMCMLLI_01567	0.0	pepD3	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
PHMCMLLI_01568	1.62e-24	-	-	-	S	-	-	-	Coenzyme PQQ synthesis protein D (PqqD)
PHMCMLLI_01569	1.59e-248	-	-	-	S	-	-	-	OPT oligopeptide transporter protein
PHMCMLLI_01570	0.0	lepA	-	-	M	ko:K03596	ko05134,map05134	ko00000,ko00001	Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
PHMCMLLI_01572	1.4e-45	-	-	-	S	-	-	-	Metallo-beta-lactamase superfamily
PHMCMLLI_01573	3.81e-274	dnaJ	-	-	O	ko:K03686	-	ko00000,ko03029,ko03110	ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
PHMCMLLI_01574	0.0	dnaK	-	-	O	ko:K04043	ko03018,ko04212,ko05152,map03018,map04212,map05152	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	Heat shock 70 kDa protein
PHMCMLLI_01575	2.32e-117	grpE	-	-	O	ko:K03687	-	ko00000,ko03029,ko03110	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
PHMCMLLI_01576	2.77e-248	hrcA	-	-	K	ko:K03705	-	ko00000,ko03000	Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
PHMCMLLI_01577	3.61e-84	-	-	-	-	-	-	-	-
PHMCMLLI_01578	4.45e-225	ribF	2.7.1.26, 2.7.7.2	-	H	ko:K11753	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Belongs to the ribF family
PHMCMLLI_01579	9.98e-215	truB	5.4.99.25	-	J	ko:K03177,ko:K03483	-	ko00000,ko01000,ko03000,ko03016	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
PHMCMLLI_01580	1.38e-77	rbfA	-	-	J	ko:K02834	-	ko00000,ko03009	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
PHMCMLLI_01581	0.0	infB	-	-	J	ko:K02519	-	ko00000,ko03012,ko03029	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
PHMCMLLI_01582	1.61e-64	ylxQ	-	-	J	-	-	-	ribosomal protein
PHMCMLLI_01583	5.93e-60	ylxR	-	-	K	ko:K07742	-	ko00000	Protein of unknown function (DUF448)
PHMCMLLI_01584	1.68e-274	nusA	-	-	K	ko:K02600	-	ko00000,ko03009,ko03021	Participates in both transcription termination and antitermination
PHMCMLLI_01585	1.1e-108	rimP	-	-	J	ko:K09748	-	ko00000,ko03009	Required for maturation of 30S ribosomal subunits
PHMCMLLI_01586	0.0	polC	2.7.7.7	-	L	ko:K03763	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PHMCMLLI_01587	0.0	proS	6.1.1.15	-	J	ko:K01881	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
PHMCMLLI_01588	5.7e-299	rseP	-	-	M	ko:K11749	ko02024,ko04112,map02024,map04112	ko00000,ko00001,ko01000,ko01002	zinc metalloprotease
PHMCMLLI_01589	5.83e-178	cdsA	2.7.7.41	-	I	ko:K00981	ko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070	ko00000,ko00001,ko00002,ko01000	Belongs to the CDS family
PHMCMLLI_01590	3.03e-181	uppS	2.5.1.31	-	H	ko:K00806	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
PHMCMLLI_01591	4.42e-293	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
PHMCMLLI_01592	1.41e-79	-	-	-	L	ko:K07491	-	ko00000	PFAM transposase IS200-family protein
PHMCMLLI_01593	8.54e-123	frr	-	-	J	ko:K02838	-	ko00000,ko03012	Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
PHMCMLLI_01594	2.97e-167	pyrH	2.7.4.22	-	F	ko:K09903	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphorylation of UMP to UDP
PHMCMLLI_01595	3.14e-197	tsf	-	-	J	ko:K02357	-	ko00000,ko03012,ko03029	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
PHMCMLLI_01596	3.54e-184	rpsB	-	-	J	ko:K02967	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uS2 family
PHMCMLLI_01597	9.78e-232	ldhD	1.1.1.28	-	CH	ko:K03778	ko00620,ko01120,map00620,map01120	ko00000,ko00001,ko01000	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PHMCMLLI_01598	3.94e-64	yazA	-	-	L	ko:K07461	-	ko00000	GIY-YIG catalytic domain protein
PHMCMLLI_01599	3.42e-181	yabB	2.1.1.223	-	L	ko:K07461,ko:K15460	-	ko00000,ko01000,ko03016	Methyltransferase small domain
PHMCMLLI_01600	1.84e-152	plsC	2.3.1.51	-	I	ko:K00655	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Acyltransferase
PHMCMLLI_01601	1.6e-40	XK26_06720	-	-	S	ko:K09976	-	ko00000	Uncharacterised protein family (UPF0154)
PHMCMLLI_01602	2.7e-47	ynzC	-	-	S	-	-	-	UPF0291 protein
PHMCMLLI_01603	2.52e-148	lexA	3.4.21.88	-	K	ko:K01356	-	ko00000,ko00002,ko01000,ko01002,ko03400	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
PHMCMLLI_01604	5.8e-270	mvaS	2.3.3.10	-	I	ko:K01641	ko00072,ko00280,ko00650,ko00900,ko01100,ko01110,ko01130,map00072,map00280,map00650,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Hydroxymethylglutaryl-CoA synthase
PHMCMLLI_01605	1.15e-160	rnhA	3.1.26.4	-	L	ko:K03469	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PHMCMLLI_01611	4.11e-86	-	-	-	D	-	-	-	Phage tail tape measure protein, TP901 family
PHMCMLLI_01615	2.51e-48	-	-	-	S	ko:K06919	-	ko00000	DNA primase
PHMCMLLI_01616	2.71e-79	-	-	-	L	-	-	-	Primase C terminal 2 (PriCT-2)
PHMCMLLI_01620	1.96e-17	-	-	-	-	-	-	-	-
PHMCMLLI_01621	6.11e-11	-	3.4.21.88	-	K	ko:K01356	-	ko00000,ko00002,ko01000,ko01002,ko03400	Peptidase S24-like
PHMCMLLI_01622	5.29e-171	int2	-	-	L	-	-	-	Belongs to the 'phage' integrase family
PHMCMLLI_01625	1.09e-20	-	-	-	-	-	-	-	-
PHMCMLLI_01627	2.96e-181	-	-	-	M	-	-	-	MucBP domain
PHMCMLLI_01628	1.53e-122	-	-	-	-	-	-	-	-
PHMCMLLI_01629	1.25e-119	apt	2.4.2.7	-	F	ko:K00759	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000,ko04147	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
PHMCMLLI_01630	0.0	recJ	-	-	L	ko:K07462	ko03410,ko03430,ko03440,map03410,map03430,map03440	ko00000,ko00001,ko01000,ko03400	Single-stranded-DNA-specific exonuclease RecJ
PHMCMLLI_01631	3.87e-200	fabG	1.1.1.100	-	S	ko:K00059,ko:K07124	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Belongs to the short-chain dehydrogenases reductases (SDR) family
PHMCMLLI_01632	2.39e-226	rnz	3.1.26.11	-	J	ko:K00784	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
PHMCMLLI_01633	1.42e-315	obg	-	-	S	ko:K03979	-	ko00000,ko01000,ko03009	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
PHMCMLLI_01634	0.0	uvrC	-	-	L	ko:K03703	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
PHMCMLLI_01635	2.44e-20	-	-	-	-	-	-	-	-
PHMCMLLI_01636	1.11e-78	-	-	-	S	-	-	-	mazG nucleotide pyrophosphohydrolase
PHMCMLLI_01637	1.17e-138	engB	-	-	D	ko:K03978	-	ko00000,ko03036	Necessary for normal cell division and for the maintenance of normal septation
PHMCMLLI_01638	5.06e-298	clpX	-	-	O	ko:K03544	ko04112,map04112	ko00000,ko00001,ko03110	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
PHMCMLLI_01639	5.54e-303	tig	-	-	D	ko:K03545	-	ko00000	Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
PHMCMLLI_01640	4.94e-288	tuf	-	-	J	ko:K02358,ko:K15771	ko02010,map02010	ko00000,ko00001,ko00002,ko02000,ko03012,ko03029,ko04147	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
PHMCMLLI_01641	1.52e-209	-	-	-	S	-	-	-	Tetratricopeptide repeat
PHMCMLLI_01642	0.0	rnjB	-	-	J	ko:K12574	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PHMCMLLI_01643	1.74e-57	rpsO	-	-	J	ko:K02956	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
PHMCMLLI_01644	1.44e-47	rpsT	-	-	J	ko:K02968	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 16S ribosomal RNA
PHMCMLLI_01645	1.06e-281	-	-	-	L	ko:K07487	-	ko00000	Transposase
PHMCMLLI_01648	0.0	-	-	-	L	-	-	-	PFAM transposase, IS4 family protein
PHMCMLLI_01649	8.7e-28	-	-	-	-	-	-	-	-
PHMCMLLI_01650	7.66e-111	-	-	-	C	-	-	-	Flavodoxin
PHMCMLLI_01651	2.26e-210	-	1.1.1.346	-	S	ko:K06221	-	ko00000,ko01000	Oxidoreductase, aldo keto reductase family protein
PHMCMLLI_01652	4.62e-228	-	-	-	C	-	-	-	nadph quinone reductase
PHMCMLLI_01653	3.32e-72	yphJ	4.1.1.44	-	S	ko:K01607	ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220	ko00000,ko00001,ko01000	decarboxylase
PHMCMLLI_01654	5.14e-140	-	-	-	M	-	-	-	Protein of unknown function (DUF3737)
PHMCMLLI_01655	4.49e-279	patB	4.4.1.8	-	E	ko:K14155	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko01000,ko01007	Aminotransferase, class I
PHMCMLLI_01656	5.16e-14	-	-	-	S	ko:K07124	-	ko00000	Enoyl-(Acyl carrier protein) reductase
PHMCMLLI_01657	4.14e-139	-	-	-	P	-	-	-	nitric oxide dioxygenase activity
PHMCMLLI_01658	4.93e-134	-	-	-	S	-	-	-	Peptidase propeptide and YPEB domain
PHMCMLLI_01659	2.4e-296	-	-	-	T	-	-	-	GHKL domain
PHMCMLLI_01660	2.68e-152	-	-	-	T	-	-	-	Transcriptional regulatory protein, C terminal
PHMCMLLI_01661	2.06e-84	-	-	-	S	ko:K07088	-	ko00000	Membrane transport protein
PHMCMLLI_01662	1.56e-57	-	-	-	H	-	-	-	RibD C-terminal domain
PHMCMLLI_01663	7.11e-48	-	-	-	H	-	-	-	RibD C-terminal domain
PHMCMLLI_01667	1.68e-265	-	2.7.13.3	-	T	ko:K07706	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	GHKL domain
PHMCMLLI_01668	5.72e-154	-	-	-	K	ko:K07707	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko02022	LytTr DNA-binding domain
PHMCMLLI_01670	3.11e-116	-	-	-	J	ko:K19055	-	ko00000,ko01000,ko03016	Aminoacyl-tRNA editing domain
PHMCMLLI_01671	4.67e-73	-	-	-	S	-	-	-	Antibiotic biosynthesis monooxygenase
PHMCMLLI_01672	1.22e-248	flp	-	-	V	-	-	-	Beta-lactamase
PHMCMLLI_01673	7.45e-124	hpt	2.4.2.8	-	F	ko:K00760	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the purine pyrimidine phosphoribosyltransferase family
PHMCMLLI_01674	4.15e-160	-	-	-	S	ko:K07507	-	ko00000,ko02000	MgtC family
PHMCMLLI_01675	7.22e-149	-	-	-	S	-	-	-	GyrI-like small molecule binding domain
PHMCMLLI_01676	1.37e-161	ybhF_2	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	AAA domain, putative AbiEii toxin, Type IV TA system
PHMCMLLI_01677	3.36e-235	-	-	-	V	ko:K01992	-	ko00000,ko00002,ko02000	ABC transporter
PHMCMLLI_01678	5.52e-116	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PHMCMLLI_01680	6.16e-44	-	-	-	-	-	-	-	-
PHMCMLLI_01681	9.53e-148	-	-	-	S	-	-	-	Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
PHMCMLLI_01682	1.58e-66	azlD	-	-	E	-	-	-	Branched-chain amino acid transport
PHMCMLLI_01683	3.25e-155	azlC	-	-	E	-	-	-	azaleucine resistance protein AzlC
PHMCMLLI_01684	0.0	-	-	-	K	-	-	-	Aminotransferase class I and II
PHMCMLLI_01685	0.0	-	-	-	S	-	-	-	amidohydrolase
PHMCMLLI_01686	4.23e-118	-	-	-	S	-	-	-	Alpha/beta hydrolase of unknown function (DUF915)
PHMCMLLI_01687	2.68e-180	celB	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PHMCMLLI_01689	9.14e-204	-	-	-	S	-	-	-	reductase
PHMCMLLI_01690	8.23e-117	-	2.3.1.183	-	M	ko:K03823	ko00440,ko01130,map00440,map01130	ko00000,ko00001,ko01000	Acetyltransferase, GNAT family
PHMCMLLI_01691	2.44e-147	lepB	3.4.21.89	-	U	ko:K03100	ko02024,ko03060,map02024,map03060	ko00000,ko00001,ko01000,ko01002	Belongs to the peptidase S26 family
PHMCMLLI_01692	4.02e-316	yxbA	6.3.1.12	-	S	ko:K17810	-	ko00000,ko01000	ATP-grasp enzyme
PHMCMLLI_01693	0.0	murE	6.3.2.13, 6.3.2.7	-	M	ko:K01928,ko:K05362	ko00300,ko00550,ko01100,map00300,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
PHMCMLLI_01694	0.0	asnB	6.3.5.4	-	E	ko:K01953	ko00250,ko01100,ko01110,map00250,map01100,map01110	ko00000,ko00001,ko01000,ko01002	Asparagine synthase
PHMCMLLI_01695	0.0	gidA	-	-	D	ko:K03495	-	ko00000,ko03016,ko03036	NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
PHMCMLLI_01696	0.0	mnmE	-	-	S	ko:K03650	-	ko00000,ko01000,ko03016	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
PHMCMLLI_01697	1.01e-175	jag	-	-	S	ko:K06346	-	ko00000	R3H domain protein
PHMCMLLI_01698	8.5e-172	yidC	-	-	U	ko:K03217	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044,ko03029	Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PHMCMLLI_01699	1.39e-76	rnpA	3.1.26.5	-	J	ko:K03536	-	ko00000,ko01000,ko03016	RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
PHMCMLLI_01700	7.96e-21	rpmH	-	-	J	ko:K02914	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL34 family
PHMCMLLI_01701	0.0	dnaA	-	-	L	ko:K02313	ko02020,ko04112,map02020,map04112	ko00000,ko00001,ko03032,ko03036	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
PHMCMLLI_01702	6.97e-264	dnaN	2.7.7.7	-	L	ko:K02338	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
PHMCMLLI_01703	5.41e-47	yaaA	-	-	S	ko:K14761	-	ko00000,ko03009	S4 domain protein YaaA
PHMCMLLI_01704	5.94e-262	recF	-	-	L	ko:K03629	ko03440,map03440	ko00000,ko00001,ko03400	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
PHMCMLLI_01705	0.0	gyrB	5.99.1.3	-	L	ko:K02470	-	ko00000,ko01000,ko03032,ko03400	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PHMCMLLI_01706	0.0	gyrA	5.99.1.3	-	L	ko:K02469	-	ko00000,ko01000,ko03032,ko03400	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PHMCMLLI_01707	4.55e-64	rpsF	-	-	J	ko:K02990	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Binds together with S18 to 16S ribosomal RNA
PHMCMLLI_01708	9.83e-113	ssb	-	-	L	ko:K03111	ko03030,ko03430,ko03440,map03030,map03430,map03440	ko00000,ko00001,ko03029,ko03032,ko03400	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
PHMCMLLI_01709	9.36e-48	rpsR	-	-	J	ko:K02963	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
PHMCMLLI_01710	5.62e-224	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
PHMCMLLI_01711	0.0	-	-	-	L	-	-	-	PFAM transposase, IS4 family protein
PHMCMLLI_01712	1.9e-177	int2	-	-	L	-	-	-	Belongs to the 'phage' integrase family
PHMCMLLI_01713	8e-17	-	-	-	-	-	-	-	-
PHMCMLLI_01717	3.45e-27	-	-	-	-	-	-	-	-
PHMCMLLI_01718	3.56e-19	-	2.7.7.7	-	L	ko:K03763	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	EXOIII
PHMCMLLI_01719	8.96e-107	-	-	-	K	-	-	-	Peptidase S24-like
PHMCMLLI_01725	3.26e-26	-	-	-	-	-	-	-	-
PHMCMLLI_01728	2.6e-185	-	-	-	L	-	-	-	DnaD domain protein
PHMCMLLI_01730	5.43e-90	-	-	-	-	-	-	-	-
PHMCMLLI_01732	1.08e-162	-	-	-	-	-	-	-	-
PHMCMLLI_01737	4.02e-19	-	-	-	-	-	-	-	-
PHMCMLLI_01738	2.45e-23	-	-	-	-	-	-	-	-
PHMCMLLI_01742	3.15e-108	-	-	-	S	-	-	-	Phage transcriptional regulator, ArpU family
PHMCMLLI_01745	4.73e-74	-	-	-	L	-	-	-	HNH nucleases
PHMCMLLI_01746	1.67e-84	-	-	-	L	-	-	-	Phage terminase, small subunit
PHMCMLLI_01747	0.0	terL	-	-	S	-	-	-	overlaps another CDS with the same product name
PHMCMLLI_01748	1.11e-221	-	-	-	S	-	-	-	Phage portal protein
PHMCMLLI_01749	2.19e-104	-	3.4.21.92	-	OU	ko:K01358	ko04112,ko04212,map04112,map04212	ko00000,ko00001,ko01000,ko01002	Belongs to the peptidase S14 family
PHMCMLLI_01750	2.7e-225	-	-	-	S	-	-	-	Phage capsid family
PHMCMLLI_01751	2.05e-34	-	-	-	S	-	-	-	Phage gp6-like head-tail connector protein
PHMCMLLI_01752	1.97e-06	-	-	-	S	-	-	-	Phage head-tail joining protein
PHMCMLLI_01753	5.49e-50	-	-	-	S	-	-	-	Bacteriophage HK97-gp10, putative tail-component
PHMCMLLI_01754	1.37e-45	-	-	-	S	-	-	-	Protein of unknown function (DUF806)
PHMCMLLI_01755	5.53e-149	-	-	-	S	-	-	-	Phage tail tube protein
PHMCMLLI_01756	6.4e-16	-	-	-	S	-	-	-	Phage tail assembly chaperone proteins, TAC
PHMCMLLI_01757	6.04e-129	-	-	-	S	-	-	-	EVIDENCE BY HOMOLOGY BIO14.03 Phage related functions and prophages
PHMCMLLI_01758	5.12e-97	-	-	-	S	-	-	-	Phage tail protein
PHMCMLLI_01759	3.81e-174	-	-	-	M	-	-	-	Prophage endopeptidase tail
PHMCMLLI_01760	3.1e-43	-	-	-	LM	-	-	-	gp58-like protein
PHMCMLLI_01767	1.79e-43	-	-	-	S	-	-	-	Bacteriophage holin of superfamily 6 (Holin_LLH)
PHMCMLLI_01768	5.1e-186	lysA2	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
PHMCMLLI_01769	4.22e-41	-	-	-	S	-	-	-	Phage derived protein Gp49-like (DUF891)
PHMCMLLI_01770	2.6e-27	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
PHMCMLLI_01771	4.86e-207	-	-	-	I	-	-	-	alpha/beta hydrolase fold
PHMCMLLI_01772	6.57e-122	frnE	5.3.4.1	-	Q	ko:K01829	-	ko00000,ko01000	DSBA-like thioredoxin domain
PHMCMLLI_01773	4.5e-73	-	-	-	-	-	-	-	-
PHMCMLLI_01776	0.0	-	-	-	L	-	-	-	PFAM transposase, IS4 family protein
PHMCMLLI_01777	3.96e-69	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
PHMCMLLI_01778	3.59e-211	cysK	2.5.1.47	-	E	ko:K01738	ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the cysteine synthase cystathionine beta- synthase family
PHMCMLLI_01779	7.26e-204	metA	2.3.1.46	-	E	ko:K00651	ko00270,ko00920,ko01100,ko01110,ko01230,map00270,map00920,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Transfers an acetyl group from acetyl-CoA to
PHMCMLLI_01780	0.0	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	FtsX-like permease family
PHMCMLLI_01781	4.29e-175	XK27_05695	-	-	V	ko:K02003,ko:K19083	ko02010,ko02020,map02010,map02020	ko00000,ko00001,ko00002,ko02000	ABC transporter, ATP-binding protein
PHMCMLLI_01782	3.17e-235	kinG	-	-	T	-	-	-	Histidine kinase-like ATPases
PHMCMLLI_01783	4.33e-161	XK27_10500	-	-	K	-	-	-	response regulator
PHMCMLLI_01784	1.7e-200	yvgN	-	-	S	-	-	-	Aldo keto reductase
PHMCMLLI_01785	1.38e-175	pnuC	-	-	H	ko:K03811	-	ko00000,ko02000	nicotinamide mononucleotide transporter
PHMCMLLI_01786	4.74e-107	greA	-	-	K	ko:K03624	-	ko00000,ko03021	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PHMCMLLI_01787	2.61e-260	-	-	-	-	-	-	-	-
PHMCMLLI_01788	7.19e-68	-	-	-	-	-	-	-	-
PHMCMLLI_01789	1.21e-48	-	-	-	-	-	-	-	-
PHMCMLLI_01790	1.31e-119	-	-	-	S	ko:K06910	-	ko00000	Phosphatidylethanolamine-binding protein
PHMCMLLI_01791	5.69e-189	-	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Tyrosine phosphatase family
PHMCMLLI_01792	3.69e-232	celE3	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase family
PHMCMLLI_01793	8.5e-287	galK	2.7.1.6	-	F	ko:K00849	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
PHMCMLLI_01794	0.0	galT	2.7.7.12	-	G	ko:K00965	ko00052,ko00520,ko01100,ko04917,map00052,map00520,map01100,map04917	ko00000,ko00001,ko00002,ko01000	UDP-glucose--hexose-1-phosphate uridylyltransferase
PHMCMLLI_01795	6.88e-232	galR	-	-	K	ko:K02529	-	ko00000,ko03000	Transcriptional regulator
PHMCMLLI_01796	4.42e-134	apl	3.1.3.1	-	S	ko:K01077	ko00730,ko00790,ko01100,ko02020,map00730,map00790,map01100,map02020	ko00000,ko00001,ko00002,ko00537,ko01000,ko04147	SNARE associated Golgi protein
PHMCMLLI_01797	7.47e-297	gltT	-	-	U	ko:K03309,ko:K11102	-	ko00000,ko02000	Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
PHMCMLLI_01798	5.66e-106	-	-	-	K	ko:K03719	-	ko00000,ko03000,ko03036	AsnC family
PHMCMLLI_01799	6.65e-104	usp5	-	-	T	-	-	-	universal stress protein
PHMCMLLI_01800	0.0	lacS	-	-	G	ko:K11104,ko:K16209	-	ko00000,ko02000	Transporter
PHMCMLLI_01801	1.51e-53	-	-	-	-	-	-	-	-
PHMCMLLI_01802	0.0	gnd	1.1.1.343, 1.1.1.44	-	H	ko:K00033	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
PHMCMLLI_01803	0.0	zwf	1.1.1.363, 1.1.1.49	-	G	ko:K00036	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,ko05230,map00030,map00480,map01100,map01110,map01120,map01130,map01200,map05230	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
PHMCMLLI_01804	2.64e-246	yycB	-	-	P	ko:K03449	-	ko00000,ko02000	Transporter, major facilitator family protein
PHMCMLLI_01805	2.13e-96	-	-	-	S	ko:K04750	-	ko00000	3-demethylubiquinone-9 3-methyltransferase
PHMCMLLI_01806	1.15e-109	nrdI	-	-	F	ko:K03647	-	ko00000	Belongs to the NrdI family
PHMCMLLI_01807	1.01e-308	yhdP	-	-	S	-	-	-	Transporter associated domain
PHMCMLLI_01808	6.17e-202	-	-	-	V	-	-	-	(ABC) transporter
PHMCMLLI_01809	4.67e-116	-	-	-	GM	-	-	-	epimerase
PHMCMLLI_01810	3.04e-117	-	-	-	K	-	-	-	Domain of unknown function (DUF1836)
PHMCMLLI_01811	8.16e-103	yybA	-	-	K	-	-	-	Transcriptional regulator
PHMCMLLI_01812	7.74e-173	XK27_07210	-	-	S	-	-	-	B3 4 domain
PHMCMLLI_01813	2.78e-238	XK27_12525	-	-	S	-	-	-	AI-2E family transporter
PHMCMLLI_01814	2.51e-198	-	-	-	G	-	-	-	Xylose isomerase domain protein TIM barrel
PHMCMLLI_01815	2.63e-211	-	-	-	-	-	-	-	-
PHMCMLLI_01816	1.4e-172	glpF	-	-	U	ko:K02440	-	ko00000,ko02000	Belongs to the MIP aquaporin (TC 1.A.8) family
PHMCMLLI_01817	3.01e-188	eutJ	-	-	E	ko:K04024	-	ko00000	Hsp70 protein
PHMCMLLI_01818	9.39e-256	-	-	-	K	-	-	-	helix_turn_helix, arabinose operon control protein
PHMCMLLI_01819	2.72e-56	-	-	-	CQ	-	-	-	BMC
PHMCMLLI_01820	3.41e-170	pduB	-	-	E	-	-	-	BMC
PHMCMLLI_01821	0.0	pduC	4.2.1.28	-	Q	ko:K01699	ko00640,map00640	ko00000,ko00001,ko01000	Dehydratase large subunit
PHMCMLLI_01822	5.43e-166	pduD	4.2.1.28	-	Q	ko:K13919	ko00640,map00640	ko00000,ko00001,ko01000	Dehydratase medium subunit
PHMCMLLI_01823	1.1e-106	pduE	4.2.1.28	-	Q	ko:K13920	ko00640,map00640	ko00000,ko00001,ko01000	Dehydratase small subunit
PHMCMLLI_01824	0.0	pduG	-	-	D	-	-	-	Diol dehydratase reactivase ATPase-like domain
PHMCMLLI_01825	8.32e-79	pduH	-	-	S	-	-	-	Dehydratase medium subunit
PHMCMLLI_01826	1.89e-111	-	-	-	CQ	-	-	-	BMC
PHMCMLLI_01827	1.18e-56	pduA_2	-	-	CQ	ko:K04027	-	ko00000	BMC
PHMCMLLI_01828	1.77e-151	pduL	2.3.1.222	-	Q	ko:K13923	ko00640,map00640	ko00000,ko00001,ko01000	Involved in 1,2-propanediol (1,2-PD) degradation by catalyzing the conversion of propanoyl-CoA to propanoyl-phosphate
PHMCMLLI_01829	9.21e-115	-	-	-	S	-	-	-	Putative propanediol utilisation
PHMCMLLI_01830	1.61e-54	pduN	-	-	CQ	ko:K04028	-	ko00000	Ethanolamine utilisation protein EutN/carboxysome
PHMCMLLI_01831	1.26e-137	-	-	-	S	-	-	-	Cobalamin adenosyltransferase
PHMCMLLI_01832	1.01e-104	pduO	-	-	S	-	-	-	Haem-degrading
PHMCMLLI_01833	0.0	pduP	1.2.1.87	-	C	ko:K13922	ko00640,map00640	ko00000,ko00001,ko01000	Aldehyde dehydrogenase family
PHMCMLLI_01834	7.6e-269	pduQ	-	-	C	ko:K13921	ko00640,map00640	ko00000,ko00001	Iron-containing alcohol dehydrogenase
PHMCMLLI_01835	5.28e-282	ackA	2.7.2.1	-	F	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PHMCMLLI_01836	3.32e-74	-	-	-	E	ko:K04031	-	ko00000	BMC
PHMCMLLI_01837	2.32e-190	-	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Pfam:Y_phosphatase3C
PHMCMLLI_01838	6.68e-156	pgm1	-	-	G	-	-	-	phosphoglycerate mutase
PHMCMLLI_01839	1.64e-110	-	-	-	P	-	-	-	Cadmium resistance transporter
PHMCMLLI_01840	2.58e-93	eutP	-	-	E	ko:K04029	-	ko00000	Ethanolamine utilisation - propanediol utilisation
PHMCMLLI_01841	2.54e-101	ykuP	-	-	C	ko:K03839	-	ko00000	Flavodoxin
PHMCMLLI_01842	6.94e-200	nqo1	-	-	S	ko:K19784	-	ko00000	NADPH-dependent FMN reductase
PHMCMLLI_01843	7.96e-133	yvqK	2.5.1.17	-	S	ko:K00798	ko00860,ko01100,map00860,map01100	ko00000,ko00001,ko00002,ko01000	Cobalamin adenosyltransferase
PHMCMLLI_01844	1.47e-265	cobD	4.1.1.81	-	E	ko:K04720	ko00860,map00860	ko00000,ko00001,ko01000	Aminotransferase class I and II
PHMCMLLI_01845	0.0	cbiA	6.3.5.11, 6.3.5.9	-	F	ko:K02224	ko00860,ko01100,ko01120,map00860,map01100,map01120	ko00000,ko00001,ko01000	Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source
PHMCMLLI_01846	3.27e-229	cobD	6.3.1.10	-	H	ko:K02227	ko00860,ko01100,map00860,map01100	ko00000,ko00001,ko00002,ko01000	Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
PHMCMLLI_01847	6.88e-160	cbiC	5.4.99.60, 5.4.99.61	-	H	ko:K06042	ko00860,ko01100,map00860,map01100	ko00000,ko00001,ko01000	Precorrin-8X methylmutase
PHMCMLLI_01848	2.57e-272	cbiD	2.1.1.195	-	H	ko:K02188	ko00860,ko01100,map00860,map01100	ko00000,ko00001,ko01000	Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A
PHMCMLLI_01849	2.01e-141	cbiE	2.1.1.289	-	H	ko:K03399	ko00860,ko01100,map00860,map01100	ko00000,ko00001,ko01000	Tetrapyrrole (Corrin/Porphyrin) Methylases
PHMCMLLI_01850	8.27e-124	cbiT	2.1.1.196	-	H	ko:K02191	ko00860,map00860	ko00000,ko00001,ko01000	Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
PHMCMLLI_01851	2.77e-172	cbiF	2.1.1.133, 2.1.1.271	-	H	ko:K05936	ko00860,ko01100,map00860,map01100	ko00000,ko00001,ko01000	Tetrapyrrole (Corrin/Porphyrin) Methylases
PHMCMLLI_01852	8.21e-246	cbiG	3.7.1.12	-	H	ko:K02189	ko00860,ko01100,map00860,map01100	ko00000,ko00001,ko01000	Cobalamin synthesis G C-terminus
PHMCMLLI_01853	8.67e-170	cbiH	2.1.1.131	-	H	ko:K05934	ko00860,ko01100,map00860,map01100	ko00000,ko00001,ko01000	Tetrapyrrole (Corrin/Porphyrin) Methylases
PHMCMLLI_01854	1.22e-170	cobK	1.3.1.106, 1.3.1.54	-	H	ko:K05895	ko00860,ko01100,map00860,map01100	ko00000,ko00001,ko01000	Precorrin-6x reductase CbiJ/CobK
PHMCMLLI_01855	0.0	cobA	2.1.1.107, 4.2.1.75	-	H	ko:K02303,ko:K13542	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	ko00000,ko00001,ko00002,ko01000	Tetrapyrrole (Corrin/Porphyrin) Methylases
PHMCMLLI_01856	1.76e-187	cbiK	4.99.1.3	-	H	ko:K02190	ko00860,ko01100,map00860,map01100	ko00000,ko00001,ko01000	Cobalt chelatase (CbiK)
PHMCMLLI_01857	1.48e-159	cbiL	2.1.1.130, 2.1.1.151	-	H	ko:K03394	ko00860,ko01100,map00860,map01100	ko00000,ko00001,ko01000	Tetrapyrrole (Corrin/Porphyrin) Methylases
PHMCMLLI_01858	4.44e-171	cbiM	-	-	P	ko:K02007	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import
PHMCMLLI_01859	7.35e-70	cbiN	-	-	P	ko:K02009	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import
PHMCMLLI_01860	8.29e-151	cbiQ	-	-	P	ko:K02008	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Cobalt transport protein
PHMCMLLI_01861	2.92e-190	cbiO	-	-	P	ko:K02006	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	part of an ABC transporter complex. Responsible for energy coupling to the transport system
PHMCMLLI_01862	0.0	cobQ	6.3.5.10	-	H	ko:K02232	ko00860,ko01100,map00860,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation
PHMCMLLI_01863	6.68e-103	cysG	1.3.1.76, 4.99.1.4	-	H	ko:K02304	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	ko00000,ko00001,ko00002,ko01000	Putative NAD(P)-binding
PHMCMLLI_01864	3.96e-293	hemA	1.2.1.70	-	H	ko:K02492	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
PHMCMLLI_01865	1.78e-210	hemC	2.5.1.61	-	H	ko:K01749	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	ko00000,ko00001,ko00002,ko01000	Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps
PHMCMLLI_01866	5.44e-230	hemB	4.2.1.24	-	H	ko:K01698	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	ko00000,ko00001,ko00002,ko01000,ko04147	Delta-aminolevulinic acid dehydratase
PHMCMLLI_01867	0.0	hemL	5.4.3.8	-	H	ko:K01845	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase class-III
PHMCMLLI_01868	1.47e-132	cobU	2.7.1.156, 2.7.7.62	-	H	ko:K02231	ko00860,ko01100,map00860,map01100	ko00000,ko00001,ko00002,ko01000	Cobinamide kinase / cobinamide phosphate guanyltransferase
PHMCMLLI_01869	1.67e-173	cobS	2.7.8.26	-	H	ko:K02233	ko00860,ko01100,map00860,map01100	ko00000,ko00001,ko00002,ko01000	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
PHMCMLLI_01870	3.23e-145	cobC	3.1.3.73	-	G	ko:K02226	ko00860,ko01100,map00860,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the phosphoglycerate mutase family
PHMCMLLI_01871	3.41e-169	-	-	-	H	-	-	-	Uroporphyrinogen-III synthase
PHMCMLLI_01872	9.25e-247	cobT	2.4.2.21	-	F	ko:K00768	ko00860,ko01100,map00860,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6- dimethylbenzimidazole (DMB)
PHMCMLLI_01873	1.99e-78	-	-	-	S	-	-	-	Domain of unknown function (DUF4430)
PHMCMLLI_01874	4.13e-116	-	-	-	S	ko:K16927	-	ko00000,ko00002,ko02000	ECF transporter, substrate-specific component
PHMCMLLI_01875	5.75e-242	ldhA	1.1.1.28	-	C	ko:K03778,ko:K18347	ko00620,ko01120,ko01502,ko02020,map00620,map01120,map01502,map02020	ko00000,ko00001,ko00002,ko01000,ko01504	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PHMCMLLI_01876	0.0	ycfI	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter, ATP-binding protein
PHMCMLLI_01877	0.0	yfiC	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter
PHMCMLLI_01878	0.0	pepD2	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
PHMCMLLI_01879	1.16e-113	ebsC	-	-	J	ko:K03976	-	ko00000,ko01000,ko03016	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
PHMCMLLI_01880	3.02e-171	gntR	-	-	K	-	-	-	UbiC transcription regulator-associated domain protein
PHMCMLLI_01881	5.86e-160	-	-	-	I	-	-	-	transferase activity, transferring acyl groups other than amino-acyl groups
PHMCMLLI_01882	0.0	xfp	4.1.2.22, 4.1.2.9	-	G	ko:K01621	ko00030,ko00710,ko01100,ko01120,map00030,map00710,map01100,map01120	ko00000,ko00001,ko01000	Phosphoketolase
PHMCMLLI_01883	3.52e-309	-	-	-	E	-	-	-	amino acid
PHMCMLLI_01884	2.23e-180	yfhR3	-	-	S	ko:K06889	-	ko00000	Serine hydrolase (FSH1)
PHMCMLLI_01885	2.05e-312	brnQ	-	-	U	ko:K03311	-	ko00000	Component of the transport system for branched-chain amino acids
PHMCMLLI_01886	1.53e-213	-	-	-	GK	-	-	-	ROK family
PHMCMLLI_01887	0.0	fusA1	-	-	J	-	-	-	elongation factor G
PHMCMLLI_01888	7.46e-106	uspA3	-	-	T	-	-	-	universal stress protein
PHMCMLLI_01889	1.42e-248	lplA	6.3.1.20	-	H	ko:K03800	ko00785,ko01100,map00785,map01100	ko00000,ko00001,ko01000	Lipoate-protein ligase
PHMCMLLI_01890	1.78e-83	-	-	-	-	-	-	-	-
PHMCMLLI_01891	3.18e-11	-	-	-	-	-	-	-	-
PHMCMLLI_01892	1.41e-152	-	-	-	-	ko:K01992	-	ko00000,ko00002,ko02000	-
PHMCMLLI_01893	3.36e-177	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter
PHMCMLLI_01894	3.93e-270	-	-	-	EGP	-	-	-	Major Facilitator
PHMCMLLI_01895	0.0	-	-	-	G	ko:K02775	ko00052,ko01100,ko02060,map00052,map01100,map02060	ko00000,ko00001,ko00002,ko02000	PTS system Galactitol-specific IIC component
PHMCMLLI_01896	6.88e-231	-	-	-	C	-	-	-	Zinc-binding dehydrogenase
PHMCMLLI_01897	2.85e-206	-	-	-	-	-	-	-	-
PHMCMLLI_01898	1.3e-95	-	-	-	K	-	-	-	Transcriptional regulator
PHMCMLLI_01899	2.43e-239	ybcH	-	-	D	ko:K06889	-	ko00000	Alpha beta
PHMCMLLI_01900	6.35e-69	-	-	-	S	ko:K08987	-	ko00000	Protein of unknown function (DUF1304)
PHMCMLLI_01901	0.0	nhaK	-	-	P	ko:K03316	-	ko00000	Sodium proton antiporter
PHMCMLLI_01902	4.57e-71	-	-	-	-	-	-	-	-
PHMCMLLI_01903	8.69e-149	-	-	-	P	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Cobalt transport protein
PHMCMLLI_01904	0.0	-	-	-	S	ko:K16786,ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
PHMCMLLI_01905	4.97e-126	ykoE	-	-	S	ko:K16925	-	ko00000,ko00002,ko02000	ABC-type cobalt transport system, permease component
PHMCMLLI_01906	1.47e-171	-	-	-	S	ko:K07090	-	ko00000	membrane transporter protein
PHMCMLLI_01907	1.28e-176	-	-	-	IQ	-	-	-	KR domain
PHMCMLLI_01908	6.65e-234	iunH1	3.2.2.1	-	F	ko:K01239	ko00230,ko00760,ko01100,map00230,map00760,map01100	ko00000,ko00001,ko01000	nucleoside hydrolase
PHMCMLLI_01909	6.61e-231	yumC	1.18.1.2, 1.19.1.1	-	C	ko:K21567	-	ko00000,ko01000	Ferredoxin--NADP reductase
PHMCMLLI_01910	9.14e-30	-	-	-	S	-	-	-	Domain of unknown function (DUF4767)
PHMCMLLI_01911	5.33e-171	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
PHMCMLLI_01912	3.44e-27	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
PHMCMLLI_01914	1.29e-149	-	-	-	S	-	-	-	HAD hydrolase, family IA, variant
PHMCMLLI_01915	0.0	yagE	-	-	E	-	-	-	amino acid
PHMCMLLI_01916	2.82e-110	dps	-	-	P	ko:K04047	-	ko00000,ko03036	Belongs to the Dps family
PHMCMLLI_01917	0.0	atp2C1	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	P-type ATPase
PHMCMLLI_01918	2.48e-225	pepR	3.4.11.5	-	E	ko:K01259	ko00330,map00330	ko00000,ko00001,ko01000,ko01002	Releases the N-terminal proline from various substrates
PHMCMLLI_01919	0.0	pepX	3.4.14.11	-	E	ko:K01281	-	ko00000,ko01000,ko01002	Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
PHMCMLLI_01920	1.25e-262	potA	3.6.3.30, 3.6.3.31	-	P	ko:K02010,ko:K11072	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
PHMCMLLI_01921	2.49e-187	potB	-	-	P	ko:K11071	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
PHMCMLLI_01922	5.39e-184	potC	-	-	P	ko:K11070	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
PHMCMLLI_01923	1.21e-266	potD	-	-	P	ko:K11069	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
PHMCMLLI_01924	2.05e-295	-	-	-	-	-	-	-	-
PHMCMLLI_01925	0.0	serS	6.1.1.11	-	J	ko:K01875	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
PHMCMLLI_01926	0.0	glnP	-	-	P	ko:K02029,ko:K02030,ko:K10036	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
PHMCMLLI_01927	5.67e-178	glnQ	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
PHMCMLLI_01928	1.3e-287	aapA	-	-	E	ko:K03293,ko:K11737	-	ko00000,ko02000	Amino acid permease
PHMCMLLI_01929	1.69e-278	nupG	-	-	F	ko:K03317,ko:K11535,ko:K16323	-	ko00000,ko02000	Nucleoside transporter
PHMCMLLI_01930	2.47e-220	rihA	3.2.2.1	-	F	ko:K01239,ko:K01250,ko:K12700	ko00230,ko00760,ko01100,map00230,map00760,map01100	ko00000,ko00001,ko01000	Nucleoside
PHMCMLLI_01931	1.26e-209	-	1.1.1.157	-	I	ko:K00074	ko00360,ko00362,ko00650,ko01100,ko01120,map00360,map00362,map00650,map01100,map01120	ko00000,ko00001,ko01000	3-hydroxyacyl-CoA dehydrogenase
PHMCMLLI_01932	2.56e-162	rsmG	2.1.1.170	-	J	ko:K03501	-	ko00000,ko01000,ko03009,ko03036	Specifically methylates the N7 position of a guanine in 16S rRNA
PHMCMLLI_01933	4.35e-199	noc	-	-	K	ko:K03497	-	ko00000,ko03000,ko03036,ko04812	Belongs to the ParB family
PHMCMLLI_01934	2.79e-178	soj	-	-	D	ko:K03496	-	ko00000,ko03036,ko04812	Sporulation initiation inhibitor
PHMCMLLI_01935	2.79e-197	spo0J	-	-	K	ko:K03497	-	ko00000,ko03000,ko03036,ko04812	Belongs to the ParB family
PHMCMLLI_01936	5.8e-43	yyzM	-	-	S	-	-	-	Bacterial protein of unknown function (DUF951)
PHMCMLLI_01937	1.75e-254	ychF	-	-	J	ko:K06942	-	ko00000,ko03009	ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
PHMCMLLI_01938	2.11e-173	-	-	-	S	-	-	-	Protein of unknown function (DUF1129)
PHMCMLLI_01939	9.74e-154	deoC	4.1.2.4	-	F	ko:K01619	ko00030,map00030	ko00000,ko00001,ko01000	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
PHMCMLLI_01940	6.87e-300	deoB	5.4.2.7	-	G	ko:K01839	ko00030,ko00230,map00030,map00230	ko00000,ko00001,ko01000	Phosphotransfer between the C1 and C5 carbon atoms of pentose
PHMCMLLI_01941	4.73e-302	pdp	2.4.2.2	-	F	ko:K00756	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	pyrimidine-nucleoside phosphorylase
PHMCMLLI_01942	3.27e-167	deoD	2.4.2.1	-	F	ko:K03784	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	Purine nucleoside phosphorylase
PHMCMLLI_01943	1.17e-218	deoR	-	-	K	ko:K05346	-	ko00000,ko03000	sugar-binding domain protein
PHMCMLLI_01944	7.28e-266	guaB	1.1.1.205	-	F	ko:K00088	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
PHMCMLLI_01945	9.76e-161	vanR	-	-	K	-	-	-	response regulator
PHMCMLLI_01946	1.85e-264	hpk31	-	-	T	-	-	-	Histidine kinase
PHMCMLLI_01947	6.44e-191	-	-	-	E	-	-	-	AzlC protein
PHMCMLLI_01948	1.36e-68	-	-	-	S	-	-	-	branched-chain amino acid
PHMCMLLI_01949	3.39e-178	-	-	-	K	-	-	-	LysR substrate binding domain
PHMCMLLI_01950	1.48e-220	pyrB	2.1.3.2	-	F	ko:K00609	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the ATCase OTCase family
PHMCMLLI_01951	2.13e-313	pyrC	3.5.2.3	-	F	ko:K01465	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
PHMCMLLI_01952	1.95e-220	pyrD	1.3.1.14, 1.3.98.1	-	F	ko:K00226,ko:K17828	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
PHMCMLLI_01953	1.96e-167	pyrF	4.1.1.23	-	F	ko:K01591	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
PHMCMLLI_01954	3.17e-149	pyrE	2.4.2.10	-	F	ko:K00762	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
PHMCMLLI_01955	4.84e-144	-	-	-	S	-	-	-	Haloacid dehalogenase-like hydrolase
PHMCMLLI_01956	1.66e-125	ribB	3.5.4.25, 4.1.99.12	-	H	ko:K14652	ko00740,ko00790,ko01100,ko01110,map00740,map00790,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
PHMCMLLI_01957	3.84e-300	cfa	2.1.1.79	-	M	ko:K00574	-	ko00000,ko01000	cyclopropane-fatty-acyl-phospholipid synthase
PHMCMLLI_01958	2.14e-220	ydbI	-	-	K	-	-	-	AI-2E family transporter
PHMCMLLI_01959	0.0	fhs	6.3.4.3	-	F	ko:K01938	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Belongs to the formate--tetrahydrofolate ligase family
PHMCMLLI_01960	0.0	alsS	2.2.1.6	-	EH	ko:K01652	ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the TPP enzyme family
PHMCMLLI_01961	2.3e-168	budA	4.1.1.5	-	H	ko:K01575	ko00650,ko00660,map00650,map00660	ko00000,ko00001,ko01000	Belongs to the alpha-acetolactate decarboxylase family
PHMCMLLI_01962	8.95e-110	purE	5.4.99.18	-	F	ko:K01588	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
PHMCMLLI_01963	4.12e-274	purK	6.3.4.18	-	F	ko:K01589	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
PHMCMLLI_01964	0.0	purB	4.3.2.2	-	F	ko:K01756	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
PHMCMLLI_01965	2.13e-169	purC	6.3.2.6	-	F	ko:K01923	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the SAICAR synthetase family
PHMCMLLI_01966	3.28e-52	purS	6.3.5.3	-	F	ko:K01952	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PHMCMLLI_01967	1.15e-162	purQ	6.3.5.3	-	F	ko:K01952	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PHMCMLLI_01968	0.0	purL	6.3.5.3	-	F	ko:K01952	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PHMCMLLI_01969	0.0	purF	2.4.2.14	-	F	ko:K00764	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko01002	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
PHMCMLLI_01970	3.78e-248	purM	6.3.3.1	-	F	ko:K01933	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Phosphoribosylformylglycinamidine cyclo-ligase
PHMCMLLI_01971	1.95e-134	purN	2.1.2.2	-	F	ko:K11175	ko00230,ko00670,ko01100,ko01110,ko01130,map00230,map00670,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
PHMCMLLI_01972	0.0	purH	2.1.2.3, 3.5.4.10	-	F	ko:K00602	ko00230,ko00670,ko01100,ko01110,ko01130,ko01523,map00230,map00670,map01100,map01110,map01130,map01523	ko00000,ko00001,ko00002,ko01000,ko04147	Bifunctional purine biosynthesis protein PurH
PHMCMLLI_01973	2.47e-311	purD	6.3.4.13	-	F	ko:K01945	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the GARS family
PHMCMLLI_01974	5.27e-169	gpmA	5.4.2.11	-	G	ko:K01834	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PHMCMLLI_01975	4.27e-231	-	-	-	-	-	-	-	-
PHMCMLLI_01976	6.99e-305	tyrS	6.1.1.1	-	J	ko:K01866	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
PHMCMLLI_01978	0.0	-	-	-	M	-	-	-	family 8
PHMCMLLI_01979	0.0	-	-	-	M	-	-	-	family 8
PHMCMLLI_01981	0.0	gtf2	-	-	M	-	-	-	A stabilizing protein that is part of the accessory SecA2 SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon. Stabilizes the glycosylation activity of Gtf1
PHMCMLLI_01982	0.0	gtf1	2.4.1.52	GT4	M	ko:K00712	-	ko00000,ko01000,ko01003	An N-acetylglucosaminyl transferase that is part of the accessory SecA2 SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon
PHMCMLLI_01983	0.0	secA2	-	-	U	ko:K03070	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
PHMCMLLI_01984	1.04e-213	asp3	-	-	S	ko:K12270	-	ko00000,ko02044	Accessory Sec secretory system ASP3
PHMCMLLI_01985	0.0	asp2	-	-	S	ko:K12269	-	ko00000,ko02044	Accessory Sec system GspB-transporter
PHMCMLLI_01986	0.0	-	-	-	M	-	-	-	transferase activity, transferring glycosyl groups
PHMCMLLI_01987	1.25e-265	secY2	-	-	U	-	-	-	Part of the accessory SecA2 SecY2 system specifically required for export of
PHMCMLLI_01988	8.52e-244	-	-	-	M	-	-	-	transferase activity, transferring glycosyl groups
PHMCMLLI_01989	1.37e-199	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
PHMCMLLI_01990	0.0	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
PHMCMLLI_01991	0.0	-	1.8.1.9	-	C	ko:K00384	ko00450,map00450	ko00000,ko00001,ko01000	Thioredoxin domain
PHMCMLLI_01992	3.25e-136	ahpC	1.11.1.15	-	O	ko:K03386	ko04214,map04214	ko00000,ko00001,ko01000,ko04147	Peroxiredoxin
PHMCMLLI_01993	7.58e-190	sdaAA	4.3.1.17	-	E	ko:K01752	ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230	ko00000,ko00001,ko01000	L-serine dehydratase, iron-sulfur-dependent, alpha subunit
PHMCMLLI_01994	2.05e-153	sdhB	4.3.1.17	-	E	ko:K01752	ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230	ko00000,ko00001,ko01000	Serine dehydratase beta chain
PHMCMLLI_01996	2.48e-57	rpsN	-	-	J	ko:K02954	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PHMCMLLI_01997	2.36e-213	prpA3	3.1.3.16	-	T	ko:K01090	-	ko00000,ko01000	Calcineurin-like phosphoesterase superfamily domain
PHMCMLLI_01998	4.44e-292	mdtG2	-	-	EGP	ko:K08161	-	ko00000,ko02000	Transporter, major facilitator family protein
PHMCMLLI_01999	1.06e-166	menG	2.1.1.163, 2.1.1.201	-	H	ko:K03183	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
PHMCMLLI_02000	1.2e-284	-	2.1.1.14	-	E	ko:K00549	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	methionine synthase, vitamin-B12 independent
PHMCMLLI_02001	1.91e-185	XK27_00940	3.5.1.9	-	S	ko:K07130	ko00380,ko00630,ko01100,map00380,map00630,map01100	ko00000,ko00001,ko00002,ko01000	Putative cyclase
PHMCMLLI_02002	1.15e-203	menA	2.5.1.74	-	H	ko:K02548	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01006	1,4-dihydroxy-2-naphthoate
PHMCMLLI_02003	3.81e-227	hepT	2.5.1.30	-	H	ko:K00805	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	Belongs to the FPP GGPP synthase family
PHMCMLLI_02004	1.53e-297	brpA	-	-	K	-	-	-	Cell envelope-like function transcriptional attenuator common domain protein
PHMCMLLI_02005	0.0	prfC	-	-	J	ko:K02837	-	ko00000,ko03012	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
PHMCMLLI_02006	0.0	-	-	-	M	-	-	-	NlpC/P60 family
PHMCMLLI_02007	8.69e-18	-	-	-	S	-	-	-	Domain of unknown function (DUF4767)
PHMCMLLI_02012	2.78e-116	-	-	-	L	-	-	-	Integrase
PHMCMLLI_02013	4.8e-19	XK27_09155	-	-	K	-	-	-	Transcriptional
PHMCMLLI_02014	7.48e-108	-	-	-	L	ko:K09384	-	ko00000	Uncharacterized conserved protein (DUF2075)
PHMCMLLI_02017	5.1e-123	-	-	-	S	-	-	-	NgoFVII restriction endonuclease
PHMCMLLI_02018	6.23e-199	nlaXM	2.1.1.37	-	H	ko:K00558	ko00270,ko01100,ko05206,map00270,map01100,map05206	ko00000,ko00001,ko00002,ko01000,ko02048,ko03032,ko03036	cytosine-specific methyltransferase
PHMCMLLI_02019	2.69e-65	vsr	-	-	L	ko:K07458	-	ko00000,ko01000,ko03400	DNA mismatch endonuclease Vsr
PHMCMLLI_02024	1.45e-102	-	-	-	L	-	-	-	Phage integrase, N-terminal SAM-like domain
PHMCMLLI_02025	2.74e-47	-	-	-	L	ko:K03111	ko03030,ko03430,ko03440,map03030,map03430,map03440	ko00000,ko00001,ko03029,ko03032,ko03400	Single-strand binding protein family
PHMCMLLI_02026	1.62e-128	nicK	-	-	L	ko:K07467	-	ko00000	Replication initiation factor
PHMCMLLI_02028	1.99e-66	-	-	-	L	-	-	-	Lactococcus lactis RepB C-terminus
PHMCMLLI_02029	8.15e-191	-	-	-	L	-	-	-	PFAM RNA-directed DNA polymerase (Reverse transcriptase)
PHMCMLLI_02030	3.61e-240	-	-	-	L	-	-	-	Transposase
PHMCMLLI_02031	2.36e-137	-	-	-	K	-	-	-	PFAM GCN5-related N-acetyltransferase
PHMCMLLI_02032	0.0	cls	-	-	I	ko:K06131	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PHMCMLLI_02033	0.0	rexB	3.6.4.12	-	L	ko:K16899	-	ko00000,ko01000,ko03400	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
PHMCMLLI_02034	0.0	addA	3.6.4.12	-	L	ko:K16898	-	ko00000,ko01000,ko03400	ATP-dependent helicase nuclease subunit A
PHMCMLLI_02035	1.27e-222	malR1	-	-	K	ko:K02529	-	ko00000,ko03000	Transcriptional regulator, LacI family
PHMCMLLI_02036	7.05e-270	atoB	1.1.1.88, 2.3.1.9	-	I	ko:K00054,ko:K00626	ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the thiolase family
PHMCMLLI_02037	0.0	malT	-	-	G	ko:K16211	-	ko00000,ko02000	Major Facilitator
PHMCMLLI_02038	0.0	mapA	2.4.1.8	GH65	G	ko:K00691	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	hydrolase, family 65, central catalytic
PHMCMLLI_02039	1.02e-153	pgmB	5.4.2.6	-	S	ko:K01838	ko00500,map00500	ko00000,ko00001,ko01000	beta-phosphoglucomutase
PHMCMLLI_02040	2.05e-111	-	-	-	T	-	-	-	Region found in RelA / SpoT proteins
PHMCMLLI_02041	2.78e-147	dltr	-	-	K	-	-	-	response regulator
PHMCMLLI_02042	5.73e-283	sptS	-	-	T	-	-	-	Histidine kinase
PHMCMLLI_02043	3.86e-263	-	-	-	P	-	-	-	Voltage gated chloride channel
PHMCMLLI_02044	0.0	gshAB	6.3.2.2	-	H	ko:K01919	ko00270,ko00480,ko01100,map00270,map00480,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the glutamate--cysteine ligase type 1 family
PHMCMLLI_02045	3.7e-176	puuD	-	-	S	ko:K07010	-	ko00000,ko01002	peptidase C26
PHMCMLLI_02046	1.48e-214	-	-	-	C	-	-	-	Aldo keto reductase
PHMCMLLI_02047	0.0	glpQ	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	Membrane domain of glycerophosphoryl diester phosphodiesterase
PHMCMLLI_02048	6.51e-114	-	-	-	S	-	-	-	ECF-type riboflavin transporter, S component
PHMCMLLI_02049	0.0	nox	1.6.3.4	-	C	ko:K17869	-	ko00000,ko01000	NADH oxidase
PHMCMLLI_02050	6.95e-238	guaC	1.7.1.7	-	F	ko:K00364	ko00230,map00230	ko00000,ko00001,ko01000	Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
PHMCMLLI_02051	0.0	purA	6.3.4.4	-	F	ko:K01939	ko00230,ko00250,ko01100,map00230,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
PHMCMLLI_02052	1.63e-124	-	-	-	-	-	-	-	-
PHMCMLLI_02053	1.82e-122	pyrR	2.4.2.9	-	F	ko:K02825	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000,ko03000	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
PHMCMLLI_02055	8.37e-145	-	-	-	K	-	-	-	Transcriptional regulator, TetR family
PHMCMLLI_02056	1.94e-91	-	-	-	-	-	-	-	-
PHMCMLLI_02057	0.0	tagE6	2.4.1.52	GT4	M	ko:K00712	-	ko00000,ko01000,ko01003	Glycosyl transferases group 1
PHMCMLLI_02058	0.0	-	2.4.1.52	GT4	M	ko:K00712	-	ko00000,ko01000,ko01003	Poly(Glycerol-phosphate) alpha-glucosyltransferase
PHMCMLLI_02059	0.0	-	-	-	M	-	-	-	domain protein
PHMCMLLI_02060	0.0	malL	3.2.1.10	GH13	G	ko:K01182	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Alpha amylase, catalytic domain protein
PHMCMLLI_02061	0.0	-	-	-	G	ko:K16211	-	ko00000,ko02000	Major Facilitator
PHMCMLLI_02062	0.0	carB	6.3.5.5	-	F	ko:K01955	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthase
PHMCMLLI_02063	2.61e-259	carA	6.3.5.5	-	F	ko:K01956	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthetase glutamine chain
PHMCMLLI_02064	0.0	-	-	-	G	ko:K16211	-	ko00000,ko02000	Major Facilitator
PHMCMLLI_02065	1.28e-230	cytR	-	-	K	ko:K02529,ko:K03604	-	ko00000,ko03000	Transcriptional regulator, LacI family
PHMCMLLI_02066	0.0	rumA_1	2.1.1.190, 2.1.1.35	-	J	ko:K00557,ko:K03215	-	ko00000,ko01000,ko03009,ko03016	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PHMCMLLI_02067	2.66e-132	-	1.5.1.36	-	S	ko:K19784,ko:K22393	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	reductase
PHMCMLLI_02068	1.07e-267	-	1.5.1.36	-	S	ko:K19784,ko:K22393,ko:K22394	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	reductase
PHMCMLLI_02069	8.03e-229	apbE	2.7.1.180	-	H	ko:K03734	-	ko00000,ko01000	Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein