ORF_ID e_value Gene_name EC_number CAZy COGs KEGG_ko KEGG_Pathway BRITE Description
PODMBIKE_00001 9.99e-31 pckA 4.1.1.49 - H ko:K01610 ko00010,ko00020,ko00620,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00710,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Phosphoenolpyruvate carboxykinase
PODMBIKE_00002 0.0 pckA 4.1.1.49 - H ko:K01610 ko00010,ko00020,ko00620,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00710,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Phosphoenolpyruvate carboxykinase
PODMBIKE_00003 0.0 frdA 1.3.5.4 - C ko:K00244 ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020 ko00000,ko00001,ko00002,ko01000 FAD binding domain
PODMBIKE_00004 1.03e-150 metI - - P ko:K02072 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter permease
PODMBIKE_00005 1.98e-237 metN - - P ko:K02071 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
PODMBIKE_00006 4.71e-169 metQ - - P ko:K02073 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Belongs to the nlpA lipoprotein family
PODMBIKE_00007 0.0 aha1 - - P ko:K12952 - ko00000,ko01000 E1-E2 ATPase
PODMBIKE_00008 1.88e-116 folA 1.5.1.3 - H ko:K00287 ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523 ko00000,ko00001,ko00002,ko01000 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
PODMBIKE_00009 2.34e-242 thyA 2.1.1.45 - F ko:K00560 ko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523 ko00000,ko00001,ko00002,ko01000 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
PODMBIKE_00010 2.93e-158 - 1.1.1.28 - CH ko:K03778 ko00620,ko01120,map00620,map01120 ko00000,ko00001,ko01000 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
PODMBIKE_00011 7.23e-85 - - - - - - - -
PODMBIKE_00012 0.0 oppA - - E ko:K02035,ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter, substratebinding protein
PODMBIKE_00014 1.2e-161 pnb - - C - - - nitroreductase
PODMBIKE_00015 2.77e-08 - - - - - - - -
PODMBIKE_00016 0.0 - - - I - - - Protein of unknown function (DUF2974)
PODMBIKE_00017 3.33e-140 engB - - D ko:K03978 - ko00000,ko03036 Necessary for normal cell division and for the maintenance of normal septation
PODMBIKE_00018 1.5e-295 clpX - - O ko:K03544 ko04112,map04112 ko00000,ko00001,ko03110 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
PODMBIKE_00019 9.52e-301 tig - - D ko:K03545 - ko00000 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
PODMBIKE_00020 7.85e-285 tuf - - J ko:K02358,ko:K15771 ko02010,map02010 ko00000,ko00001,ko00002,ko02000,ko03012,ko03029,ko04147 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
PODMBIKE_00021 2.69e-190 - - - - - - - -
PODMBIKE_00022 0.0 rnjB - - J ko:K12574 ko03018,map03018 ko00000,ko00001,ko01000,ko03019 An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PODMBIKE_00023 1.01e-56 rpsO - - J ko:K02956 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
PODMBIKE_00024 7.29e-45 rpsT - - J ko:K02968 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds directly to 16S ribosomal RNA
PODMBIKE_00025 1.83e-231 holA 2.7.7.7 - L ko:K02340 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase III delta subunit
PODMBIKE_00026 0.0 comEC - - S ko:K02238 - ko00000,ko00002,ko02044 Competence protein ComEC
PODMBIKE_00027 2.26e-118 comEA - - L ko:K02237 - ko00000,ko00002,ko02044 Competence protein ComEA
PODMBIKE_00028 1.53e-243 lon - - T ko:K07177 ko02024,map02024 ko00000,ko00001,ko01002 Belongs to the peptidase S16 family
PODMBIKE_00029 3.09e-107 coaD 2.7.7.3 - H ko:K00954 ko00770,ko01100,map00770,map01100 ko00000,ko00001,ko00002,ko01000 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
PODMBIKE_00030 5.62e-126 rsmD 2.1.1.171 - L ko:K08316 - ko00000,ko01000,ko03009 RNA methyltransferase, RsmD family
PODMBIKE_00031 1.31e-70 ylbG - - S - - - UPF0298 protein
PODMBIKE_00032 1.37e-271 ftsW - - D ko:K03588 ko04112,map04112 ko00000,ko00001,ko02000,ko03036 Belongs to the SEDS family
PODMBIKE_00033 0.0 typA - - T ko:K06207 - ko00000 GTP-binding protein TypA
PODMBIKE_00034 8.33e-133 def 3.5.1.88 - J ko:K01462 - ko00000,ko01000 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
PODMBIKE_00035 3.04e-48 ykzG - - S - - - Belongs to the UPF0356 family
PODMBIKE_00036 0.0 rnjA - - J ko:K12574 ko03018,map03018 ko00000,ko00001,ko01000,ko03019 An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PODMBIKE_00037 0.0 - 1.8.1.7 - C ko:K00383,ko:K21739 ko00480,ko04918,map00480,map04918 ko00000,ko00001,ko01000 Pyridine nucleotide-disulfide oxidoreductase
PODMBIKE_00038 0.0 recD2 3.1.11.5 - L ko:K03581 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
PODMBIKE_00039 8.69e-149 - - - S - - - repeat protein
PODMBIKE_00040 7.5e-160 pgm - - G - - - Phosphoglycerate mutase family
PODMBIKE_00041 3.28e-280 mnmA 2.8.1.13 - J ko:K00566 ko04122,map04122 ko00000,ko00001,ko01000,ko03016 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
PODMBIKE_00042 2.45e-75 XK27_04120 - - S - - - Putative amino acid metabolism
PODMBIKE_00043 3.66e-274 iscS 2.8.1.7 - E ko:K04487 ko00730,ko01100,ko04122,map00730,map01100,map04122 ko00000,ko00001,ko01000,ko02048,ko03016,ko03029 Aminotransferase class V
PODMBIKE_00044 1.56e-163 mtnN 3.2.2.9 - E ko:K01243 ko00270,ko01100,ko01230,map00270,map01100,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
PODMBIKE_00045 3.72e-36 - - - - - - - -
PODMBIKE_00046 3.66e-132 nudF 3.6.1.13 - L ko:K01515 ko00230,map00230 ko00000,ko00001,ko01000 ADP-ribose pyrophosphatase
PODMBIKE_00047 3.24e-44 cspA - - K ko:K03704 - ko00000,ko03000 'Cold-shock' DNA-binding domain
PODMBIKE_00048 0.0 ileS 6.1.1.5 - J ko:K01870 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
PODMBIKE_00049 6.89e-188 ylmH - - S - - - S4 domain protein
PODMBIKE_00050 7.21e-62 yggT - - S ko:K02221 - ko00000,ko02044 YGGT family
PODMBIKE_00051 3.21e-99 sepF - - D ko:K09772 - ko00000,ko03036 Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
PODMBIKE_00052 4.25e-306 ftsZ - - D ko:K03531 ko04112,map04112 ko00000,ko00001,ko02048,ko03036,ko04812 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
PODMBIKE_00053 0.0 ftsA - - D ko:K03590 ko04112,map04112 ko00000,ko00001,ko03036,ko04812 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
PODMBIKE_00054 3.01e-190 divIB - - D ko:K03589 ko04112,map04112 ko00000,ko00001,ko03036 Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
PODMBIKE_00055 2.35e-266 murG 2.4.1.227 GT28 M ko:K02563 ko00550,ko01100,ko01502,ko04112,map00550,map01100,map01502,map04112 ko00000,ko00001,ko01000,ko01011 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
PODMBIKE_00056 0.0 murD 6.3.2.9 - M ko:K01925 ko00471,ko00550,ko01100,map00471,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
PODMBIKE_00057 1.09e-227 mraY 2.7.8.13 - M ko:K01000 ko00550,ko01100,ko01502,map00550,map01100,map01502 ko00000,ko00001,ko01000,ko01011 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
PODMBIKE_00058 0.0 pbpX - - M ko:K08724,ko:K12552,ko:K12556 ko00550,ko01100,ko01501,map00550,map01100,map01501 ko00000,ko00001,ko01000,ko01011 Penicillin-binding Protein
PODMBIKE_00059 1.14e-71 ftsL - - D - - - Cell division protein FtsL
PODMBIKE_00060 2.66e-221 rsmH 2.1.1.199 - J ko:K03438 - ko00000,ko01000,ko03009 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
PODMBIKE_00061 2.58e-98 mraZ - - K ko:K03925 - ko00000 Belongs to the MraZ family
PODMBIKE_00062 2.49e-73 - - - S - - - Protein of unknown function (DUF3397)
PODMBIKE_00064 2.8e-124 mreD - - - ko:K03571 - ko00000,ko03036 -
PODMBIKE_00065 2.17e-175 mreC - - M ko:K03570 - ko00000,ko03036 Involved in formation and maintenance of cell shape
PODMBIKE_00066 9.63e-225 mreB - - D ko:K03569 - ko00000,ko02048,ko03036,ko04812 cell shape determining protein MreB
PODMBIKE_00067 3.2e-149 radC - - L ko:K03630 - ko00000 DNA repair protein
PODMBIKE_00068 1.15e-162 - - - S - - - Haloacid dehalogenase-like hydrolase
PODMBIKE_00069 2.5e-296 folC 6.3.2.12, 6.3.2.17 - H ko:K11754 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the folylpolyglutamate synthase family
PODMBIKE_00070 0.0 valS 6.1.1.9 - J ko:K01873 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
PODMBIKE_00071 2.38e-167 rsuA 5.4.99.19 - J ko:K06183 - ko00000,ko01000,ko03009 Belongs to the pseudouridine synthase RsuA family
PODMBIKE_00072 4.43e-291 thiI 2.8.1.4 - H ko:K03151 ko00730,ko01100,ko04122,map00730,map01100,map04122 ko00000,ko00001,ko01000,ko03016 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
PODMBIKE_00073 8.03e-277 iscS2 2.8.1.7 - E ko:K04487 ko00730,ko01100,ko04122,map00730,map01100,map04122 ko00000,ko00001,ko01000,ko02048,ko03016,ko03029 Aminotransferase class V
PODMBIKE_00074 0.0 ezrA - - D ko:K06286 - ko00000,ko03036 modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
PODMBIKE_00075 3.59e-141 rpsD - - J ko:K02986 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
PODMBIKE_00076 2.41e-106 - - - S - - - Protein of unknown function (DUF1694)
PODMBIKE_00077 5.39e-309 rarA - - L ko:K07478 - ko00000 recombination factor protein RarA
PODMBIKE_00078 5.05e-57 - - - - - - - -
PODMBIKE_00079 2.07e-102 uspA - - T - - - universal stress protein
PODMBIKE_00080 1.19e-279 rodA - - D ko:K05837 - ko00000,ko03036 Belongs to the SEDS family
PODMBIKE_00081 6.23e-47 - - - S - - - Protein of unknown function (DUF2969)
PODMBIKE_00082 4.4e-64 ytjA - - S ko:K08998 - ko00000 Could be involved in insertion of integral membrane proteins into the membrane
PODMBIKE_00083 5.61e-226 mbl - - D ko:K03569 - ko00000,ko02048,ko03036,ko04812 Cell shape determining protein MreB Mrl
PODMBIKE_00084 7.57e-44 - - - S - - - Protein of unknown function (DUF1146)
PODMBIKE_00085 7.32e-95 atpC - - C ko:K02114 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 Produces ATP from ADP in the presence of a proton gradient across the membrane
PODMBIKE_00086 0.0 atpD 3.6.3.14 - C ko:K02112 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194,ko01000 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
PODMBIKE_00087 1.66e-218 atpG - - C ko:K02115 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
PODMBIKE_00088 0.0 atpA 3.6.3.14 - C ko:K02111 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194,ko01000 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
PODMBIKE_00089 2.9e-122 atpH - - C ko:K02113 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PODMBIKE_00090 6.38e-102 atpF - - C ko:K02109 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
PODMBIKE_00091 7.13e-39 atpE - - C ko:K02110 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PODMBIKE_00092 9.32e-164 atpB - - C ko:K02108 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194,ko03110 it plays a direct role in the translocation of protons across the membrane
PODMBIKE_00093 3.18e-147 upp 2.4.2.9 - F ko:K00761 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko01000 Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
PODMBIKE_00094 2.63e-241 ywlC 2.7.7.87 - J ko:K07566 - ko00000,ko01000,ko03009,ko03016 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
PODMBIKE_00095 3.44e-200 prmC 2.1.1.297 - J ko:K02493 - ko00000,ko01000,ko03012 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
PODMBIKE_00096 2.77e-249 prfA - - J ko:K02835 - ko00000,ko03012 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
PODMBIKE_00097 1.08e-145 tdk 2.7.1.21 - F ko:K00857 ko00240,ko00983,ko01100,map00240,map00983,map01100 ko00000,ko00001,ko01000 thymidine kinase
PODMBIKE_00098 0.0 murE2 6.3.2.13 - M ko:K01928 ko00300,ko00550,map00300,map00550 ko00000,ko00001,ko01000,ko01011 Mur ligase, middle domain
PODMBIKE_00099 3.69e-45 - - - - - - - -
PODMBIKE_00100 2.97e-244 ampC - - V - - - Beta-lactamase
PODMBIKE_00103 7.78e-228 oppA - - E ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter, substratebinding protein
PODMBIKE_00104 1.02e-32 oppA - - E ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter, substratebinding protein
PODMBIKE_00105 0.0 pgi 5.3.1.9 - G ko:K01810 ko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the GPI family
PODMBIKE_00106 4.43e-138 vanZ - - V - - - VanZ like family
PODMBIKE_00107 0.0 ltaS 2.7.8.20 - M ko:K19005 ko00561,ko01100,map00561,map01100 ko00000,ko00001,ko01000 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
PODMBIKE_00108 0.0 yclK - - T - - - Histidine kinase
PODMBIKE_00109 6.36e-172 - - - K - - - Transcriptional regulatory protein, C terminal
PODMBIKE_00112 4.9e-283 ackA 2.7.2.1 - F ko:K00925 ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PODMBIKE_00113 1.77e-235 ytxK 2.1.1.72 - L ko:K00571 - ko00000,ko01000,ko02048 N-6 DNA Methylase
PODMBIKE_00116 3e-98 - - - - ko:K02246 - ko00000,ko00002,ko02044 -
PODMBIKE_00117 2.72e-67 comGC - - U ko:K02245 - ko00000,ko00002,ko02044 competence protein ComGC
PODMBIKE_00118 1.43e-209 comGB - - NU ko:K02244 - ko00000,ko00002,ko02044 type II secretion system
PODMBIKE_00119 2.81e-232 comGA - - NU ko:K02243 - ko00000,ko00002,ko02044 Type II IV secretion system protein
PODMBIKE_00120 1.01e-169 yebC - - K - - - Transcriptional regulatory protein
PODMBIKE_00121 9.45e-121 - - - S - - - VanZ like family
PODMBIKE_00122 3.33e-209 psaA - - P ko:K02077 - ko00000,ko00002,ko02000 Belongs to the bacterial solute-binding protein 9 family
PODMBIKE_00123 3.26e-203 - - - S - - - Phospholipase, patatin family
PODMBIKE_00124 4.18e-133 msrA 1.8.4.11, 1.8.4.12 - O ko:K07304,ko:K12267 - ko00000,ko01000 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PODMBIKE_00125 0.0 - - - E - - - Amino acid permease
PODMBIKE_00126 2.61e-83 - - - GM - - - epimerase
PODMBIKE_00127 3.19e-110 ptpA 3.1.3.48 - T ko:K01104 - ko00000,ko01000 Belongs to the low molecular weight phosphotyrosine protein phosphatase family
PODMBIKE_00128 3.45e-86 - - - - - - - -
PODMBIKE_00130 4.84e-161 - - - T - - - Diguanylate cyclase, GGDEF domain
PODMBIKE_00131 4.03e-150 - - - T - - - Diguanylate cyclase, GGDEF domain
PODMBIKE_00132 1.29e-232 - - - T - - - Putative diguanylate phosphodiesterase
PODMBIKE_00133 4.87e-190 - - - T - - - diguanylate cyclase activity
PODMBIKE_00134 2.89e-178 - - - - - - - -
PODMBIKE_00135 2.04e-79 crcB - - U ko:K06199 - ko00000,ko02000 Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PODMBIKE_00136 2.7e-86 crcB1 - - U ko:K06199 - ko00000,ko02000 Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PODMBIKE_00137 0.0 copA 3.6.3.3, 3.6.3.4, 3.6.3.5, 3.6.3.54 - P ko:K01533,ko:K01534,ko:K17686 ko01524,ko04016,map01524,map04016 ko00000,ko00001,ko01000 P-type ATPase
PODMBIKE_00138 1.58e-83 - - - S - - - Cupredoxin-like domain
PODMBIKE_00139 3.22e-103 atkY - - K ko:K02171 ko01501,map01501 ko00000,ko00001,ko00002,ko01504,ko03000 Copper transport repressor CopY TcrY
PODMBIKE_00140 6.52e-75 - - - V - - - peptidase activity
PODMBIKE_00141 1.1e-191 - - - S - - - hydrolase
PODMBIKE_00142 0.0 glmM 5.4.2.10 - G ko:K03431 ko00520,ko01100,ko01130,map00520,map01100,map01130 ko00000,ko00001,ko01000 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
PODMBIKE_00143 2.15e-212 ybbR - - S - - - YbbR-like protein
PODMBIKE_00144 1.1e-191 dacA 2.7.7.85 - S ko:K18672 - ko00000,ko01000 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
PODMBIKE_00145 1.2e-263 potD - - P ko:K11069 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter
PODMBIKE_00146 2.96e-174 potC - - P ko:K11070 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter permease
PODMBIKE_00147 6.56e-184 potB - - P ko:K11071 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter permease
PODMBIKE_00148 6.4e-260 potA 3.6.3.30, 3.6.3.31 - P ko:K02010,ko:K11072 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
PODMBIKE_00149 1.25e-206 murB 1.3.1.98 - M ko:K00075 ko00520,ko00550,ko01100,map00520,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Cell wall formation
PODMBIKE_00150 9.43e-127 dnaQ 2.7.7.7 - L ko:K02342 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase III
PODMBIKE_00151 2.67e-111 ydiB - - O ko:K06925 - ko00000,ko03016 Hydrolase, P-loop family
PODMBIKE_00152 3.29e-234 pta 2.3.1.8, 3.6.3.21 - C ko:K00625,ko:K02028 ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000,ko02000 phosphate acetyltransferase
PODMBIKE_00153 1.77e-171 ung 3.2.2.27 - L ko:K03648 ko03410,ko05340,map03410,map05340 ko00000,ko00001,ko01000,ko03400 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
PODMBIKE_00154 9.09e-203 ycsE - - S - - - Sucrose-6F-phosphate phosphohydrolase
PODMBIKE_00155 3.12e-135 - - - - - - - -
PODMBIKE_00156 5.86e-31 - - - K ko:K06977 - ko00000 acetyltransferase
PODMBIKE_00157 2.01e-34 - - - K ko:K06977 - ko00000 acetyltransferase
PODMBIKE_00158 1.83e-181 tpiA 5.3.1.1 - G ko:K01803 ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko04147 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
PODMBIKE_00159 2.86e-286 pgk 2.7.2.3 - F ko:K00927 ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the phosphoglycerate kinase family
PODMBIKE_00160 1.42e-244 gap 1.2.1.12 - G ko:K00134 ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
PODMBIKE_00161 4.59e-270 cggR - - K ko:K05311 - ko00000,ko03000 Putative sugar-binding domain
PODMBIKE_00163 2.33e-146 XK27_08845 - - S ko:K05833 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
PODMBIKE_00164 5.15e-66 XK27_08840 - - U ko:K05832 - ko00000,ko00002,ko02000 Belongs to the binding-protein-dependent transport system permease family
PODMBIKE_00165 1.98e-40 ABC-SBP - - S ko:K01989,ko:K05832 - ko00000,ko00002,ko02000 ABC transporter substrate binding protein
PODMBIKE_00166 0.0 - - - - - - - -
PODMBIKE_00167 1.21e-130 clpP 3.4.21.92 - O ko:K01358 ko04112,ko04212,map04112,map04212 ko00000,ko00001,ko01000,ko01002 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
PODMBIKE_00168 1.54e-218 whiA - - K ko:K09762 - ko00000 May be required for sporulation
PODMBIKE_00169 1.47e-242 yvcK - - S - - - Required for morphogenesis under gluconeogenic growth conditions
PODMBIKE_00170 1.16e-209 yvcJ - - S ko:K06958 - ko00000,ko03019 Displays ATPase and GTPase activities
PODMBIKE_00171 5.42e-110 dmpA 3.4.11.19 - EQ ko:K01266 - ko00000,ko01000,ko01002 Peptidase family S58
PODMBIKE_00173 4.86e-166 dppA - - E ko:K16203 - ko00000,ko01000,ko01002 D-aminopeptidase
PODMBIKE_00174 9.33e-119 - - - S - - - Short repeat of unknown function (DUF308)
PODMBIKE_00175 0.0 uvrA - - L ko:K03701 ko03420,map03420 ko00000,ko00001,ko03400 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
PODMBIKE_00176 0.0 uvrB - - L ko:K03702 ko03420,map03420 ko00000,ko00001,ko03400 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
PODMBIKE_00177 2.48e-224 trxB 1.8.1.9 - C ko:K00384 ko00450,map00450 ko00000,ko00001,ko01000 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
PODMBIKE_00178 1.12e-241 gpsA 1.1.1.94 - I ko:K00057 ko00564,ko01110,map00564,map01110 ko00000,ko00001,ko01000 Glycerol-3-phosphate dehydrogenase
PODMBIKE_00179 3.87e-200 lgt - - M ko:K13292 - ko00000,ko01000 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
PODMBIKE_00180 2.28e-223 hprK - - F ko:K06023 - ko00000,ko01000 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
PODMBIKE_00181 2.72e-57 - - - - - - - -
PODMBIKE_00182 2.24e-238 prfB - - J ko:K02836 - ko00000,ko03012 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
PODMBIKE_00183 0.0 secA - - U ko:K03070 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
PODMBIKE_00184 2.28e-126 hpf - - J ko:K05808 - ko00000,ko03009 Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
PODMBIKE_00185 1.14e-157 comFC - - S ko:K02242 - ko00000,ko00002,ko02044 Competence protein
PODMBIKE_00186 2.9e-313 comFA - - L ko:K02240 - ko00000,ko00002,ko02044 Helicase C-terminal domain protein
PODMBIKE_00187 2.7e-153 yvyE 3.4.13.9 - S ko:K01271 - ko00000,ko01000,ko01002 YigZ family
PODMBIKE_00188 1.88e-273 tagO 2.7.8.33, 2.7.8.35 - M ko:K02851 - ko00000,ko01000,ko01003,ko01005 transferase
PODMBIKE_00189 1.65e-284 rny - - S ko:K18682 ko03018,map03018 ko00000,ko00001,ko01000,ko03019 Endoribonuclease that initiates mRNA decay
PODMBIKE_00190 1.13e-252 recA - - L ko:K03553 ko03440,map03440 ko00000,ko00001,ko00002,ko03400 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
PODMBIKE_00191 1.87e-126 pgsA 2.7.8.5 - I ko:K00995 ko00564,ko01100,map00564,map01100 ko00000,ko00001,ko01000 Belongs to the CDP-alcohol phosphatidyltransferase class-I family
PODMBIKE_00192 2.05e-157 ymfM - - S ko:K15539 - ko00000 Helix-turn-helix domain
PODMBIKE_00193 4.64e-170 fabG 1.1.1.100 - IQ ko:K00059 ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 Enoyl-(Acyl carrier protein) reductase
PODMBIKE_00194 1.2e-301 ymfH - - S - - - Peptidase M16
PODMBIKE_00195 3.8e-293 ymfF - - S - - - Peptidase M16 inactive domain protein
PODMBIKE_00196 0.0 ftsK - - D ko:K03466 - ko00000,ko03036 Belongs to the FtsK SpoIIIE SftA family
PODMBIKE_00197 1.81e-90 - - - S - - - Protein of unknown function (DUF1149)
PODMBIKE_00198 2.21e-133 cspR 2.1.1.207 - J ko:K03216 - ko00000,ko01000,ko03016 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
PODMBIKE_00199 5.85e-255 XK27_05220 - - S - - - AI-2E family transporter
PODMBIKE_00200 1.11e-84 srlB 2.7.1.198 - G ko:K02781 ko00051,ko02060,map00051,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system glucitol/sorbitol-specific IIA component
PODMBIKE_00201 1.74e-253 pgl 3.1.1.31 - G ko:K07404 ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Lactonase, 7-bladed beta-propeller
PODMBIKE_00202 3.14e-189 uppP 3.6.1.27 - V ko:K06153 ko00550,map00550 ko00000,ko00001,ko01000,ko01011 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
PODMBIKE_00203 7.7e-31 - - - - - - - -
PODMBIKE_00204 8.2e-220 rluD2 5.4.99.23 - J ko:K06180 - ko00000,ko01000,ko03009 Responsible for synthesis of pseudouridine from uracil
PODMBIKE_00205 7.48e-192 nadK 2.7.1.23 - F ko:K00858 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko01000 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
PODMBIKE_00206 1.34e-145 yjbM 2.7.6.5 - S ko:K07816 ko00230,map00230 ko00000,ko00001,ko01000 RelA SpoT domain protein
PODMBIKE_00207 4.73e-140 - - - S - - - CYTH
PODMBIKE_00208 6.36e-145 yjbH - - Q - - - Thioredoxin
PODMBIKE_00209 1.17e-210 coiA - - S ko:K06198 - ko00000 Competence protein
PODMBIKE_00210 1.5e-174 mecA - - NOT ko:K16511 - ko00000 Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
PODMBIKE_00211 3.22e-90 spxA - - K ko:K16509 - ko00000 Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
PODMBIKE_00212 0.0 ptsI 2.7.3.9 - G ko:K08483 ko02060,map02060 ko00000,ko00001,ko01000,ko02000 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
PODMBIKE_00213 6.14e-53 ptsH - - G ko:K11189 - ko00000,ko02000 phosphocarrier protein HPR
PODMBIKE_00215 0.0 clpE - - O ko:K03697 - ko00000,ko03110 Belongs to the ClpA ClpB family
PODMBIKE_00216 4.54e-59 XK27_09445 - - S - - - Domain of unknown function (DUF1827)
PODMBIKE_00217 5.23e-88 sufI - - Q - - - Multicopper oxidase
PODMBIKE_00218 6.63e-265 sufI - - Q - - - Multicopper oxidase
PODMBIKE_00219 9.06e-27 - - - - - - - -
PODMBIKE_00220 0.0 prfC - - J ko:K02837 - ko00000,ko03012 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
PODMBIKE_00221 1.07e-202 hlyX - - S ko:K03699 - ko00000,ko02042 Transporter associated domain
PODMBIKE_00222 7.41e-97 - - - - - - - -
PODMBIKE_00223 1.75e-110 - - - - - - - -
PODMBIKE_00224 1.89e-188 recX - - S ko:K03565 - ko00000,ko03400 Regulatory protein RecX
PODMBIKE_00225 0.0 rumA_1 2.1.1.190, 2.1.1.35 - J ko:K00557,ko:K03215 - ko00000,ko01000,ko03009,ko03016 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PODMBIKE_00226 9.07e-233 ybcH - - D ko:K06889 - ko00000 Alpha beta
PODMBIKE_00228 4.78e-219 galU 2.7.7.9 - M ko:K00963 ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130 ko00000,ko00001,ko00002,ko01000 UTP-glucose-1-phosphate uridylyltransferase
PODMBIKE_00229 8.5e-213 rbn - - S ko:K07058 - ko00000 Belongs to the UPF0761 family
PODMBIKE_00230 3.34e-209 map 3.4.11.18 - E ko:K01265 - ko00000,ko01000,ko01002 Methionine Aminopeptidase
PODMBIKE_00231 8.2e-102 ykuP - - C ko:K03839 - ko00000 Flavodoxin
PODMBIKE_00232 1.74e-106 gtcA1 - - S - - - Teichoic acid glycosylation protein
PODMBIKE_00233 1.49e-274 mnaA 5.1.3.14 - G ko:K01791 ko00520,ko01100,ko05111,map00520,map01100,map05111 ko00000,ko00001,ko00002,ko01000,ko01005 Belongs to the UDP-N-acetylglucosamine 2-epimerase family
PODMBIKE_00234 3.66e-42 - - - - - - - -
PODMBIKE_00235 1.02e-230 - - - E - - - Amino acid permease
PODMBIKE_00237 0.0 speA 4.1.1.17, 4.1.1.18, 4.1.1.19 - E ko:K01581,ko:K01582,ko:K01585 ko00310,ko00330,ko00480,ko00960,ko01100,ko01110,ko01130,map00310,map00330,map00480,map00960,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Orn/Lys/Arg decarboxylase, C-terminal domain
PODMBIKE_00238 2.15e-299 ynbB - - P - - - aluminum resistance
PODMBIKE_00239 5.67e-296 pyrP - - F ko:K02824 - ko00000,ko02000 Permease
PODMBIKE_00240 7.28e-177 pfoS/R - - S ko:K07035 - ko00000 Phosphotransferase system, EIIC
PODMBIKE_00241 2.95e-39 pfoS/R - - S ko:K07035 - ko00000 Phosphotransferase system, EIIC
PODMBIKE_00243 2.6e-314 chbC - - G ko:K02761 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko02000 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PODMBIKE_00244 2.16e-282 yfmL - - L - - - DEAD DEAH box helicase
PODMBIKE_00245 3.53e-158 lys - - M ko:K07273 - ko00000 Glycosyl hydrolases family 25
PODMBIKE_00246 4.62e-292 - - - E ko:K03294 - ko00000 amino acid
PODMBIKE_00247 5.18e-134 hpt 2.4.2.8 - F ko:K00760 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 ko00000,ko00001,ko01000 Belongs to the purine pyrimidine phosphoribosyltransferase family
PODMBIKE_00248 0.0 yhdP - - S - - - Transporter associated domain
PODMBIKE_00249 4.16e-31 - 3.4.22.70 - M ko:K07284 - ko00000,ko01000,ko01002,ko01011 Sortase family
PODMBIKE_00251 0.0 xfp 4.1.2.22, 4.1.2.9 - G ko:K01621 ko00030,ko00710,ko01100,ko01120,map00030,map00710,map01100,map01120 ko00000,ko00001,ko01000 Phosphoketolase
PODMBIKE_00252 3.82e-168 gntR - - K - - - UbiC transcription regulator-associated domain protein
PODMBIKE_00253 2.57e-222 rihC 3.2.2.1 - F ko:K01239,ko:K01250,ko:K12700 ko00230,ko00760,ko01100,map00230,map00760,map01100 ko00000,ko00001,ko01000 Nucleoside
PODMBIKE_00254 1.68e-157 rpiA 5.3.1.6 - G ko:K01807 ko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
PODMBIKE_00255 1.29e-154 rpe 5.1.3.1 - G ko:K01783 ko00030,ko00040,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the ribulose-phosphate 3-epimerase family
PODMBIKE_00256 1.51e-207 rbsK 2.7.1.15 - H ko:K00852 ko00030,map00030 ko00000,ko00001,ko01000 Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PODMBIKE_00257 1.6e-114 - - - - - - - -
PODMBIKE_00258 4.9e-49 - - - - - - - -
PODMBIKE_00260 0.0 - - - S ko:K13730 ko05100,map05100 ko00000,ko00001 Uncharacterized protein conserved in bacteria (DUF2252)
PODMBIKE_00261 0.0 ppk 2.7.4.1 - P ko:K00937 ko00190,ko03018,map00190,map03018 ko00000,ko00001,ko01000,ko03019 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
PODMBIKE_00262 0.0 ppx3 3.6.1.11, 3.6.1.40 - FP ko:K01524 ko00230,map00230 ko00000,ko00001,ko01000 exopolyphosphatase
PODMBIKE_00263 1.83e-190 - - - ET ko:K10039 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Bacterial periplasmic substrate-binding proteins
PODMBIKE_00264 4.57e-142 glnP - - P ko:K10040 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter permease
PODMBIKE_00265 3.27e-142 glnM - - P ko:K10040 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter permease
PODMBIKE_00266 1.33e-192 glnH - - ET ko:K10039 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter substrate-binding protein
PODMBIKE_00267 1.62e-172 glnQ - - E ko:K10041 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ABC transporter, ATP-binding protein
PODMBIKE_00268 1.69e-151 udk 2.7.1.48 - F ko:K00876 ko00240,ko00983,ko01100,map00240,map00983,map01100 ko00000,ko00001,ko01000 Zeta toxin
PODMBIKE_00269 5.48e-143 udk 2.7.1.48 - F ko:K00876 ko00240,ko00983,ko01100,map00240,map00983,map01100 ko00000,ko00001,ko01000 Zeta toxin
PODMBIKE_00271 3.36e-130 ykoE - - S ko:K16925 - ko00000,ko00002,ko02000 ABC-type cobalt transport system, permease component
PODMBIKE_00272 2.34e-266 pepA - - E - - - M42 glutamyl aminopeptidase
PODMBIKE_00273 0.0 pepDA - - E ko:K08659 - ko00000,ko01000,ko01002 Dipeptidase
PODMBIKE_00274 1.89e-183 murI 5.1.1.3 - M ko:K01776 ko00471,ko01100,map00471,map01100 ko00000,ko00001,ko01000,ko01011 Provides the (R)-glutamate required for cell wall biosynthesis
PODMBIKE_00275 3.74e-153 ybhL - - S ko:K06890 - ko00000 Belongs to the BI1 family
PODMBIKE_00276 2.39e-276 pmrA - - EGP ko:K08161 - ko00000,ko02000 MFS_1 like family
PODMBIKE_00277 1.54e-75 - - - - - - - -
PODMBIKE_00279 2.32e-64 proP - - EGP ko:K03761,ko:K03762 - ko00000,ko02000 Sugar (and other) transporter
PODMBIKE_00280 4.47e-129 proP - - EGP ko:K03761,ko:K03762 - ko00000,ko02000 Sugar (and other) transporter
PODMBIKE_00281 0.0 ykpA - - S - - - ABC transporter, ATP-binding protein
PODMBIKE_00282 2.25e-213 - - - S ko:K07088 - ko00000 Membrane transport protein
PODMBIKE_00283 0.0 ppc 4.1.1.31 - H ko:K01595 ko00620,ko00680,ko00710,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00710,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
PODMBIKE_00284 4.27e-85 mtlD 1.1.1.17 - C ko:K00009 ko00051,map00051 ko00000,ko00001,ko01000 mannitol-1-phosphate 5-dehydrogenase activity
PODMBIKE_00285 4.6e-10 mtlD 1.1.1.17 - C ko:K00009 ko00051,map00051 ko00000,ko00001,ko01000 mannitol-1-phosphate 5-dehydrogenase activity
PODMBIKE_00286 2.2e-68 mtlR - - K ko:K03483 - ko00000,ko03000 transcriptional antiterminator
PODMBIKE_00287 0.0 glmS 2.6.1.16 - M ko:K00820 ko00250,ko00520,ko01100,ko01130,ko04931,map00250,map00520,map01100,map01130,map04931 ko00000,ko00001,ko01000,ko01002 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
PODMBIKE_00288 3.25e-112 - - - K ko:K03719 - ko00000,ko03000,ko03036 AsnC family
PODMBIKE_00289 3.77e-23 - - - S ko:K08987 - ko00000 membrane
PODMBIKE_00290 3.34e-34 - 2.3.1.79 - S ko:K00661 - ko00000,ko01000 Maltose acetyltransferase
PODMBIKE_00292 8.91e-11 - - - T - - - GGDEF domain
PODMBIKE_00293 9.59e-132 - - - T - - - Gaf domain
PODMBIKE_00294 9.96e-124 - 3.6.1.22 - L ko:K03426 ko00760,ko01100,ko04146,map00760,map01100,map04146 ko00000,ko00001,ko01000 NUDIX domain
PODMBIKE_00295 3.85e-158 alkD - - L - - - DNA alkylation repair enzyme
PODMBIKE_00296 1.79e-304 brnQ - - U ko:K03311 - ko00000 Component of the transport system for branched-chain amino acids
PODMBIKE_00297 7.46e-74 - - - K ko:K21562 - ko00000,ko03000 Transcriptional regulator, Crp Fnr family
PODMBIKE_00298 1.02e-32 - - - K ko:K21562 - ko00000,ko03000 Transcriptional regulator, Crp Fnr family
PODMBIKE_00299 1.99e-62 - - - D - - - Di-iron-containing protein involved in the repair of iron-sulfur clusters
PODMBIKE_00300 6.01e-45 copZ - - P - - - Heavy-metal-associated domain
PODMBIKE_00301 0.0 cadA 3.6.3.3, 3.6.3.5 - P ko:K01534 - ko00000,ko01000 P-type ATPase
PODMBIKE_00302 1.24e-91 - - - C - - - carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
PODMBIKE_00303 2.47e-52 carB 6.3.5.5 - F ko:K01955 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Carbamoyl-phosphate synthase
PODMBIKE_00304 3.6e-39 carB 6.3.5.5 - F ko:K01955 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Carbamoyl-phosphate synthase
PODMBIKE_00305 3.59e-154 - 4.2.1.1 - P ko:K01674 ko00910,map00910 ko00000,ko00001,ko01000 Eukaryotic-type carbonic anhydrase
PODMBIKE_00306 2.13e-189 - - - L ko:K07448 - ko00000,ko02048 Mrr N-terminal domain
PODMBIKE_00307 0.0 rumA_2 2.1.1.190 - J ko:K03215 - ko00000,ko01000,ko03009 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PODMBIKE_00308 2.18e-158 ybbB - - S - - - Protein of unknown function (DUF1211)
PODMBIKE_00309 5.36e-218 dagK 2.7.1.107 - G ko:K07029 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 ko00000,ko00001,ko01000 Lipid kinase
PODMBIKE_00310 0.0 gatB 6.3.5.6, 6.3.5.7 - J ko:K02434 ko00970,ko01100,map00970,map01100 ko00000,ko00001,ko01000,ko03029 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PODMBIKE_00311 0.0 gatA 6.3.5.6, 6.3.5.7 - J ko:K02433 ko00970,ko01100,map00970,map01100 ko00000,ko00001,ko01000,ko03029 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
PODMBIKE_00312 3.99e-64 gatC 6.3.5.6, 6.3.5.7 - J ko:K02435 ko00970,ko01100,map00970,map01100 ko00000,ko00001,ko01000,ko03029 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PODMBIKE_00313 8.06e-259 camS - - S - - - sex pheromone
PODMBIKE_00314 0.0 ligA 6.5.1.2 - L ko:K01972 ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430 ko00000,ko00001,ko01000,ko03032,ko03400 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
PODMBIKE_00315 0.0 pcrA 3.6.4.12 - L ko:K03657 ko03420,ko03430,map03420,map03430 ko00000,ko00001,ko01000,ko03400 ATP-dependent DNA helicase
PODMBIKE_00316 1.75e-148 acmA 3.2.1.17, 3.2.1.96 - NU ko:K01185,ko:K01227 ko00511,map00511 ko00000,ko00001,ko01000 mannosyl-glycoprotein
PODMBIKE_00317 7.97e-131 - - - S - - - ECF transporter, substrate-specific component
PODMBIKE_00319 2.99e-119 ydcK - - S ko:K03095 - ko00000 Belongs to the SprT family
PODMBIKE_00320 1.11e-138 - - - V ko:K01990 - ko00000,ko00002,ko02000 ABC transporter
PODMBIKE_00323 0.0 pacL 3.6.3.8 - P ko:K01537 - ko00000,ko01000 P-type ATPase
PODMBIKE_00324 3.16e-194 nadE 6.3.1.5 - F ko:K01916 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
PODMBIKE_00325 2.51e-174 - - - M - - - Glycosyltransferase sugar-binding region containing DXD motif
PODMBIKE_00326 1.51e-260 - - - M - - - Glycosyl transferases group 1
PODMBIKE_00327 1.19e-173 tagA 2.4.1.187 GT26 F ko:K05946 ko05111,map05111 ko00000,ko00001,ko01000,ko01003 Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
PODMBIKE_00328 0.0 epsU - - S ko:K03328 - ko00000 Polysaccharide biosynthesis protein
PODMBIKE_00329 4.01e-283 - - - M - - - CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
PODMBIKE_00330 2.79e-162 gntR1 - - K ko:K03710 - ko00000,ko03000 UTRA
PODMBIKE_00331 1.39e-255 - - - - - - - -
PODMBIKE_00332 7.63e-272 - - - - - - - -
PODMBIKE_00333 5.85e-81 oppA2 - - E ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter, substratebinding protein
PODMBIKE_00334 1.75e-125 oppA2 - - E ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter, substratebinding protein
PODMBIKE_00335 4.82e-13 oppA2 - - E ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter, substratebinding protein
PODMBIKE_00338 6.91e-222 pfoSR - - S ko:K07035 - ko00000 Phosphotransferase system, EIIC
PODMBIKE_00339 1.72e-285 araT 2.6.1.57 - E ko:K00832,ko:K00841 ko00270,ko00300,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01230,map00270,map00300,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Aminotransferase
PODMBIKE_00342 1.46e-236 yumC 1.18.1.2, 1.19.1.1 - C ko:K21567 - ko00000,ko01000 Ferredoxin--NADP reductase
PODMBIKE_00343 1.9e-153 dedA - - S ko:K03975 - ko00000 SNARE-like domain protein
PODMBIKE_00344 4.03e-137 - - - S - - - Protein of unknown function (DUF1461)
PODMBIKE_00345 5.46e-185 nagD 3.1.3.41 - G ko:K01101 ko00627,ko01120,map00627,map01120 ko00000,ko00001,ko01000 Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
PODMBIKE_00346 7.82e-114 yutD - - S - - - Protein of unknown function (DUF1027)
PODMBIKE_00347 0.0 sasH 3.1.3.5, 3.1.3.6, 3.1.4.16, 3.6.1.45 - F ko:K01081,ko:K01119,ko:K07004,ko:K08693,ko:K11751 ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110 ko00000,ko00001,ko01000 Belongs to the 5'-nucleotidase family
PODMBIKE_00348 2.89e-77 - - - - - - - -
PODMBIKE_00349 2.14e-232 ccpA - - K ko:K02529 - ko00000,ko03000 catabolite control protein A
PODMBIKE_00350 3.94e-273 pepQ 3.4.13.9 - E ko:K01271 - ko00000,ko01000,ko01002 Creatinase/Prolidase N-terminal domain
PODMBIKE_00351 4.86e-59 - - - - - - - -
PODMBIKE_00352 1.1e-27 ytxG - - S - - - protein containing a divergent version of the methyl-accepting chemotaxis-like domain
PODMBIKE_00353 3.99e-196 ykuT - - M ko:K16052,ko:K22044 - ko00000,ko02000 mechanosensitive ion channel
PODMBIKE_00354 1.78e-147 rdgB 3.6.1.66 - F ko:K02428 ko00230,map00230 ko00000,ko00001,ko01000 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
PODMBIKE_00355 1.01e-87 yslB - - S - - - Protein of unknown function (DUF2507)
PODMBIKE_00356 3.78e-72 trxA - - O ko:K03671 ko04621,ko05418,map04621,map05418 ko00000,ko00001,ko03110 Belongs to the thioredoxin family
PODMBIKE_00357 0.0 mutS2 - - L ko:K07456 ko03430,map03430 ko00000,ko00001,ko03400 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
PODMBIKE_00358 1.92e-67 yrzB - - S - - - Belongs to the UPF0473 family
PODMBIKE_00359 1.09e-94 yrrK - - J ko:K07447 - ko00000,ko01000 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
PODMBIKE_00360 3.09e-56 yrzL - - S - - - Belongs to the UPF0297 family
PODMBIKE_00361 0.0 alaS 6.1.1.7 - J ko:K01872 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
PODMBIKE_00362 4.29e-295 cshB 3.6.4.13 - JKL ko:K05592,ko:K18692 ko03018,map03018 ko00000,ko00001,ko01000,ko03009,ko03019 DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
PODMBIKE_00363 1.89e-228 nrnA 3.1.13.3, 3.1.3.7 - S ko:K06881 ko00920,ko01100,ko01120,map00920,map01100,map01120 ko00000,ko00001,ko01000,ko03400 DHHA1 domain protein
PODMBIKE_00364 2.84e-263 dinB 2.7.7.7 - L ko:K02346 - ko00000,ko01000,ko03400 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
PODMBIKE_00365 0.0 zwf 1.1.1.363, 1.1.1.49 - G ko:K00036 ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,ko05230,map00030,map00480,map01100,map01110,map01120,map01130,map01200,map05230 ko00000,ko00001,ko00002,ko01000,ko04147 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
PODMBIKE_00366 5.99e-71 yajC - - U ko:K03210 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Preprotein translocase
PODMBIKE_00367 1.02e-236 ruvB 3.6.4.12 - L ko:K03551 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
PODMBIKE_00368 4.72e-134 ruvA 3.6.4.12 - L ko:K03550 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
PODMBIKE_00369 0.0 mutL - - L ko:K03572 ko03430,map03430 ko00000,ko00001,ko03400 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
PODMBIKE_00370 0.0 mutS - - L ko:K03555 ko03430,map03430 ko00000,ko00001,ko03400 that it carries out the mismatch recognition step. This protein has a weak ATPase activity
PODMBIKE_00371 0.0 groL - - O ko:K04077 ko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152 ko00000,ko00001,ko03019,ko03029,ko03110,ko04147 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
PODMBIKE_00372 3.69e-59 groS - - O ko:K04078 - ko00000,ko03029,ko03110 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
PODMBIKE_00373 2.3e-158 rex - - K ko:K01926 - ko00000,ko03000 Modulates transcription in response to changes in cellular NADH NAD( ) redox state
PODMBIKE_00374 0.0 ydiF - - S ko:K06158 - ko00000,ko03012 ABC transporter, ATP-binding protein
PODMBIKE_00375 1.43e-248 tsaD 2.3.1.234 - J ko:K01409 - ko00000,ko01000,ko03016 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
PODMBIKE_00376 1.57e-124 rimI 2.3.1.128 - K ko:K03789 - ko00000,ko01000,ko03009 Ribosomal-protein-alanine acetyltransferase
PODMBIKE_00377 8.27e-163 yeaZ 2.3.1.234 - O ko:K01409,ko:K14742 - ko00000,ko01000,ko03016 Universal bacterial protein YeaZ
PODMBIKE_00378 1.9e-116 - - - S - - - ECF transporter, substrate-specific component
PODMBIKE_00379 3.83e-116 - - - S - - - ECF transporter, substrate-specific component
PODMBIKE_00380 2.72e-186 fat 3.1.2.21 - I ko:K01071 ko00061,ko01100,map00061,map01100 ko00000,ko00001,ko01000,ko01004 Acyl-ACP thioesterase
PODMBIKE_00381 4.53e-204 rsmI 2.1.1.198 - H ko:K07056 - ko00000,ko01000,ko03009 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
PODMBIKE_00382 2.21e-72 yabA - - L - - - Involved in initiation control of chromosome replication
PODMBIKE_00383 5.96e-206 holB 2.7.7.7 - L ko:K02341 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase III
PODMBIKE_00384 1.83e-70 yaaQ - - S - - - Cyclic-di-AMP receptor
PODMBIKE_00385 2.32e-146 tmk 2.7.4.9 - F ko:K00943 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
PODMBIKE_00386 2.21e-46 - - - S - - - Protein of unknown function (DUF2508)
PODMBIKE_00387 3.6e-139 recR - - L ko:K06187 ko03440,map03440 ko00000,ko00001,ko03400 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
PODMBIKE_00388 1.9e-68 yaaK - - S ko:K09747 - ko00000 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
PODMBIKE_00389 0.0 dnaX 2.7.7.7 - L ko:K02343 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PODMBIKE_00390 1.93e-117 tadA 3.5.4.33 - F ko:K11991 - ko00000,ko01000,ko03016 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
PODMBIKE_00391 1.79e-144 rsmC 2.1.1.172 - J ko:K00564 - ko00000,ko01000,ko03009 Methyltransferase
PODMBIKE_00392 2.31e-117 pyrR 2.4.2.9 - F ko:K02825 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko01000,ko03000 Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
PODMBIKE_00393 1.84e-199 - - - - - - - -
PODMBIKE_00394 4.44e-52 - - - - - - - -
PODMBIKE_00395 9.36e-20 - - - L ko:K07483,ko:K07497 - ko00000 Helix-turn-helix domain
PODMBIKE_00396 7.54e-264 pbpX1 - - V - - - Beta-lactamase
PODMBIKE_00397 1.24e-147 dnaD - - L ko:K02086 - ko00000 DnaD domain protein
PODMBIKE_00398 7.81e-148 nth 4.2.99.18 - L ko:K10773 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
PODMBIKE_00399 4.33e-192 - - - S - - - Sucrose-6F-phosphate phosphohydrolase
PODMBIKE_00400 4.46e-92 - - - I - - - Psort location Cytoplasmic, score
PODMBIKE_00401 7.07e-71 - - - I - - - acetylesterase activity
PODMBIKE_00402 6.48e-243 - 1.1.1.28 - CH ko:K03778 ko00620,ko01120,map00620,map01120 ko00000,ko00001,ko01000 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PODMBIKE_00403 0.0 yuxL 3.4.19.1 - E ko:K01303 - ko00000,ko01000,ko01002 Prolyl oligopeptidase family
PODMBIKE_00404 0.0 ponA 2.4.1.129, 3.4.16.4 GT51 M ko:K05366 ko00550,ko01100,ko01501,map00550,map01100,map01501 ko00000,ko00001,ko01000,ko01003,ko01011 penicillin-binding protein 1A
PODMBIKE_00405 6.44e-152 recU - - L ko:K03700 - ko00000,ko03400 Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
PODMBIKE_00406 8.99e-138 ypsA - - S - - - Belongs to the UPF0398 family
PODMBIKE_00407 5.35e-85 gpsB - - D - - - Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
PODMBIKE_00408 1.01e-278 ypsC - - L ko:K07444 - ko00000,ko01000 Belongs to the methyltransferase superfamily
PODMBIKE_00409 2.13e-160 XK27_01810 - - S - - - Calcineurin-like phosphoesterase
PODMBIKE_00410 3.03e-76 - - - - - - - -
PODMBIKE_00411 0.0 fhs 6.3.4.3 - F ko:K01938 ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Belongs to the formate--tetrahydrofolate ligase family
PODMBIKE_00412 1.3e-99 lspA 3.4.23.36 - MU ko:K03101 ko03060,map03060 ko00000,ko00001,ko01000,ko01002 This protein specifically catalyzes the removal of signal peptides from prolipoproteins
PODMBIKE_00413 1.95e-218 rluD 5.4.99.23 - J ko:K06180 - ko00000,ko01000,ko03009 Responsible for synthesis of pseudouridine from uracil
PODMBIKE_00414 1.88e-251 carA 6.3.5.5 - F ko:K01956 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Carbamoyl-phosphate synthetase glutamine chain
PODMBIKE_00415 0.0 carB1 6.3.5.5 - F ko:K01955 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Carbamoyl-phosphate synthase
PODMBIKE_00416 4.02e-58 XK27_08630 - - T ko:K07166 - ko00000 Belongs to the UPF0237 family
PODMBIKE_00417 1.39e-313 XK27_08635 - - S ko:K09157 - ko00000 UPF0210 protein
PODMBIKE_00418 0.0 FbpA - - K - - - Fibronectin-binding protein
PODMBIKE_00419 8.41e-203 - - - S - - - EDD domain protein, DegV family
PODMBIKE_00420 1.45e-237 - - - - - - - -
PODMBIKE_00421 5.54e-213 - - - EG - - - EamA-like transporter family
PODMBIKE_00422 2.26e-154 serA 1.1.1.399, 1.1.1.95 - EH ko:K00058 ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PODMBIKE_00423 3.81e-111 serA 1.1.1.399, 1.1.1.95 - EH ko:K00058 ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PODMBIKE_00424 2.5e-141 serC 2.6.1.52 - E ko:K00831 ko00260,ko00680,ko00750,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map00750,map01100,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
PODMBIKE_00425 2.18e-74 serC 2.6.1.52 - E ko:K00831 ko00260,ko00680,ko00750,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map00750,map01100,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
PODMBIKE_00426 5.73e-149 pgm1 - - G - - - phosphoglycerate mutase
PODMBIKE_00427 2.84e-16 ylbB - - V ko:K02004 - ko00000,ko00002,ko02000 ABC transporter permease
PODMBIKE_00428 3.44e-117 yfhC - - C - - - Nitroreductase family
PODMBIKE_00429 4.94e-59 pyrB 2.1.3.2 - F ko:K00609 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the ATCase OTCase family
PODMBIKE_00430 3.97e-32 pyrB 2.1.3.2 - F ko:K00609 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the ATCase OTCase family
PODMBIKE_00432 1.06e-256 xerS - - L ko:K03733 - ko00000,ko03036 Belongs to the 'phage' integrase family
PODMBIKE_00433 1.72e-265 glxK 2.7.1.165 - G ko:K00865 ko00260,ko00561,ko00630,ko01100,ko01120,ko01130,map00260,map00561,map00630,map01100,map01120,map01130 ko00000,ko00001,ko01000 Belongs to the glycerate kinase type-1 family
PODMBIKE_00434 6.23e-267 - - - S - - - Uncharacterized protein conserved in bacteria (DUF2325)
PODMBIKE_00435 1.49e-98 - - - S ko:K07126 - ko00000 Sel1-like repeats.
PODMBIKE_00436 1.06e-164 - - - T - - - Diguanylate cyclase, GGDEF domain
PODMBIKE_00437 3.22e-07 - - - T - - - Diguanylate cyclase, GGDEF domain
PODMBIKE_00438 4.35e-26 - - - S - - - Domain of unknown function (DUF4343)
PODMBIKE_00439 2.43e-118 - - - GM - - - NmrA-like family
PODMBIKE_00440 0.0 hsdR 3.1.21.3 - V ko:K01153 - ko00000,ko01000,ko02048 Subunit R is required for both nuclease and ATPase activities, but not for modification
PODMBIKE_00441 0.0 hsdM 2.1.1.72 - V ko:K03427 - ko00000,ko01000,ko02048 type I restriction-modification system
PODMBIKE_00442 1.08e-177 - 3.1.21.3 - V ko:K01154 - ko00000,ko01000,ko02048 Type I restriction modification DNA specificity domain
PODMBIKE_00443 2.29e-222 - - - L - - - Belongs to the 'phage' integrase family
PODMBIKE_00444 1.54e-159 - 3.1.21.3 - V ko:K01154 - ko00000,ko01000,ko02048 Type I restriction modification DNA specificity domain
PODMBIKE_00445 8.41e-42 - - - K - - - LysR substrate binding domain
PODMBIKE_00446 2.74e-106 - - - L - - - DDE superfamily endonuclease
PODMBIKE_00448 1.64e-154 WQ51_05710 - - S - - - Mitochondrial biogenesis AIM24
PODMBIKE_00449 0.0 oppA - - E ko:K02035,ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 Bacterial extracellular solute-binding proteins, family 5 Middle
PODMBIKE_00450 4.66e-93 ypmB - - S - - - Protein conserved in bacteria
PODMBIKE_00451 0.0 dinG 3.6.4.12 - L ko:K03722 - ko00000,ko01000,ko03400 helicase involved in DNA repair and perhaps also replication
PODMBIKE_00452 0.0 addA 3.6.4.12 - L ko:K16898 - ko00000,ko01000,ko03400 ATP-dependent helicase nuclease subunit A
PODMBIKE_00453 0.0 rexB 3.6.4.12 - L ko:K16899 - ko00000,ko01000,ko03400 The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
PODMBIKE_00454 2.02e-215 mvk 2.7.1.36 - I ko:K00869 ko00900,ko01100,ko01110,ko01130,ko04146,map00900,map01100,map01110,map01130,map04146 ko00000,ko00001,ko00002,ko01000 GHMP kinases N terminal domain
PODMBIKE_00455 4.99e-224 mvaD 4.1.1.33 - I ko:K01597 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 diphosphomevalonate decarboxylase
PODMBIKE_00456 4.5e-259 mvaK2 2.7.4.2 - I ko:K00938 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 phosphomevalonate kinase
PODMBIKE_00457 3.77e-246 fni 5.3.3.2 - C ko:K01823 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
PODMBIKE_00458 2.02e-219 ppaC 3.6.1.1 - C ko:K15986 ko00190,map00190 ko00000,ko00001,ko01000 inorganic pyrophosphatase
PODMBIKE_00459 0.0 parC - - L ko:K02621 - ko00000,ko01000,ko02048,ko03032,ko03036 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PODMBIKE_00460 0.0 parE - - L ko:K02622 - ko00000,ko01000,ko02048,ko03032,ko03036 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PODMBIKE_00461 7.44e-143 plsY 2.3.1.15 - I ko:K08591 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko01004 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
PODMBIKE_00462 3.97e-38 yfiC - - V ko:K06147 - ko00000,ko02000 ABC transporter
PODMBIKE_00463 5.06e-235 yfiC - - V ko:K06147 - ko00000,ko02000 ABC transporter
PODMBIKE_00464 1.05e-68 - - - V ko:K06147 - ko00000,ko02000 abc transporter atp-binding protein
PODMBIKE_00465 2.39e-55 ycfI - - V ko:K06147 - ko00000,ko02000 ABC transporter, ATP-binding protein
PODMBIKE_00466 4.65e-08 ycfI - - V ko:K06147 - ko00000,ko02000 ABC transporter, ATP-binding protein
PODMBIKE_00467 1.95e-59 - - - V ko:K06147 - ko00000,ko02000 (ABC) transporter
PODMBIKE_00468 1.6e-12 - - - K - - - helix_turn_helix multiple antibiotic resistance protein
PODMBIKE_00469 1.51e-192 - - - G - - - Sucrose-6F-phosphate phosphohydrolase
PODMBIKE_00470 2.98e-135 - - - - - - - -
PODMBIKE_00471 9.32e-198 - - - T - - - diguanylate cyclase
PODMBIKE_00472 0.0 - - - T - - - Putative diguanylate phosphodiesterase
PODMBIKE_00474 1.43e-135 - - - T ko:K16923 - ko00000,ko00002,ko02000 phosphorelay sensor kinase activity
PODMBIKE_00475 8.58e-174 - - - P ko:K16785 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Cobalt transport protein
PODMBIKE_00476 1.57e-192 - - - P ko:K16786 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ABC transporter
PODMBIKE_00477 7.72e-180 - - - P ko:K16787 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ABC transporter
PODMBIKE_00478 3.03e-53 - - - S - - - C4-dicarboxylate anaerobic carrier
PODMBIKE_00479 5.22e-131 M1-740 - - I - - - NUDIX domain
PODMBIKE_00480 6.12e-167 - - - S - - - Glycosyl hydrolases family 18
PODMBIKE_00481 2.39e-59 - - - S - - - Glycosyl hydrolases family 18
PODMBIKE_00482 3.17e-156 - 3.6.1.13 - L ko:K01515 ko00230,map00230 ko00000,ko00001,ko01000 NUDIX domain
PODMBIKE_00484 7.23e-107 yjcA - - S ko:K19350 ko02010,map02010 ko00000,ko00001,ko01504,ko02000 ABC transporter
PODMBIKE_00485 3.07e-15 yjcA - - S ko:K19350 ko02010,map02010 ko00000,ko00001,ko01504,ko02000 ABC transporter
PODMBIKE_00486 2.71e-28 cbh 3.5.1.24 - M ko:K01442 ko00120,ko00121,ko01100,map00120,map00121,map01100 ko00000,ko00001,ko01000 Linear amide C-N hydrolases, choloylglycine hydrolase family
PODMBIKE_00487 0.0 phoR 2.7.13.3 - T ko:K07636 ko02020,map02020 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Histidine kinase
PODMBIKE_00488 2.5e-161 phoB - - T ko:K07658 ko02020,map02020 ko00000,ko00001,ko00002,ko02022 Transcriptional regulatory protein, C terminal
PODMBIKE_00489 1.98e-147 - - - P ko:K02039 - ko00000 Plays a role in the regulation of phosphate uptake
PODMBIKE_00490 9.06e-182 pstB 3.6.3.27 - P ko:K02036 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PODMBIKE_00491 4.17e-202 pstA - - P ko:K02038 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Phosphate transport system permease protein PstA
PODMBIKE_00492 5.27e-206 pstC - - P ko:K02037 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 probably responsible for the translocation of the substrate across the membrane
PODMBIKE_00493 8.71e-201 pstS - - P ko:K02040 ko02010,ko02020,ko05152,map02010,map02020,map05152 ko00000,ko00001,ko00002,ko02000 Phosphate
PODMBIKE_00495 5.71e-18 - - - T - - - GGDEF domain
PODMBIKE_00496 9.19e-76 - - - T - - - Putative diguanylate phosphodiesterase
PODMBIKE_00497 2.26e-49 - - - - - - - -
PODMBIKE_00498 1.48e-38 oppA - - E ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter, substratebinding protein
PODMBIKE_00499 1.33e-140 oppA - - E ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter, substratebinding protein
PODMBIKE_00500 4.05e-39 oppA - - E ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter, substratebinding protein
PODMBIKE_00501 1.04e-44 oppA - - E ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter, substratebinding protein
PODMBIKE_00503 2.66e-219 - - - S ko:K07011 - ko00000 Glycosyltransferase like family 2
PODMBIKE_00504 3.48e-269 epsF - GT4 M ko:K19424 - ko00000,ko01000,ko01003 Glycosyl transferases group 1
PODMBIKE_00505 7.51e-190 - - - M - - - Domain of unknown function (DUF4422)
PODMBIKE_00507 0.0 epsIIL - - S ko:K03328 - ko00000 Membrane protein involved in the export of O-antigen and teichoic acid
PODMBIKE_00508 9.79e-232 licD - - M ko:K07271 - ko00000,ko01000 LicD family
PODMBIKE_00509 6.41e-111 tagD 2.7.7.15, 2.7.7.39 - IM ko:K00968,ko:K00980 ko00440,ko00564,ko01100,ko05231,map00440,map00564,map01100,map05231 ko00000,ko00001,ko00002,ko01000 Glycerol-3-phosphate cytidylyltransferase
PODMBIKE_00510 5.78e-83 - - - S - - - Bacterial membrane protein, YfhO
PODMBIKE_00512 4.36e-13 ftsK - - I ko:K03466 - ko00000,ko03036 transferase activity, transferring acyl groups other than amino-acyl groups
PODMBIKE_00513 3.75e-103 - - - S - - - VanZ like family
PODMBIKE_00514 1.33e-95 gtcA - - S - - - Teichoic acid glycosylation protein
PODMBIKE_00515 1.01e-165 - - - S - - - VanZ like family
PODMBIKE_00516 2.49e-50 - - - L - - - DNA synthesis involved in DNA repair
PODMBIKE_00517 3.38e-138 - - - L - - - DNA synthesis involved in DNA repair
PODMBIKE_00519 0.0 - 3.1.4.46, 3.2.1.99 GH43 N ko:K01126,ko:K06113 ko00564,map00564 ko00000,ko00001,ko01000 domain, Protein
PODMBIKE_00521 1.35e-172 glpQ1 3.1.4.46 - C ko:K01126 ko00564,map00564 ko00000,ko00001,ko01000 glycerophosphoryl diester phosphodiesterase
PODMBIKE_00522 4.52e-160 gpm2 - - G - - - Phosphoglycerate mutase family
PODMBIKE_00523 1.28e-147 XK27_08875 - - O - - - PFAM peptidase M10A and M12B, matrixin and adamalysin
PODMBIKE_00524 0.0 helD 3.6.4.12 - L ko:K03657 ko03420,ko03430,map03420,map03430 ko00000,ko00001,ko01000,ko03400 DNA helicase
PODMBIKE_00525 1.47e-38 aatB - - ET ko:K02030 - ko00000,ko00002,ko02000 ABC transporter substrate-binding protein
PODMBIKE_00526 2.48e-92 aatB - - ET ko:K02030 - ko00000,ko00002,ko02000 ABC transporter substrate-binding protein
PODMBIKE_00528 1.17e-96 - - - K - - - LytTr DNA-binding domain
PODMBIKE_00529 1.73e-132 - - - E - - - GDSL-like Lipase/Acylhydrolase
PODMBIKE_00530 1.01e-220 coaA 2.7.1.33 - F ko:K00867 ko00770,ko01100,map00770,map01100 ko00000,ko00001,ko00002,ko01000 Pantothenic acid kinase
PODMBIKE_00531 4.8e-128 efp - - J ko:K02356 - ko00000,ko03012 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
PODMBIKE_00532 2.84e-101 - - - S - - - Helix-turn-helix domain
PODMBIKE_00533 1.24e-230 pepR 3.4.11.5 - E ko:K01259 ko00330,map00330 ko00000,ko00001,ko01000,ko01002 Releases the N-terminal proline from various substrates
PODMBIKE_00534 3.13e-252 - - - - - - - -
PODMBIKE_00535 8.58e-90 - - - L - - - COG2826 Transposase and inactivated derivatives, IS30 family
PODMBIKE_00536 1.19e-69 - - - L - - - transposase and inactivated derivatives, IS30 family
PODMBIKE_00537 0.0 - - - V - - - ABC transporter transmembrane region
PODMBIKE_00538 2.39e-12 - - - S - - - PAS domain
PODMBIKE_00539 2.48e-62 - - - GK - - - ROK family
PODMBIKE_00540 1.99e-44 - - - GK - - - ROK family
PODMBIKE_00542 2.52e-200 dkgB - - S - - - reductase
PODMBIKE_00543 2.59e-175 endA - - F ko:K15051 - ko00000 DNA RNA non-specific endonuclease
PODMBIKE_00544 3.97e-55 - - - E ko:K08659 - ko00000,ko01000,ko01002 dipeptidase activity
PODMBIKE_00545 2.09e-136 - - - - - - - -
PODMBIKE_00546 1.06e-109 paiA 2.3.1.57 - K ko:K22441 - ko00000,ko01000 Acetyltransferase (GNAT) domain
PODMBIKE_00547 8.98e-224 pepI 3.4.11.5 - E ko:K01259 ko00330,map00330 ko00000,ko00001,ko01000,ko01002 Releases the N-terminal proline from various substrates
PODMBIKE_00548 1.7e-208 corA - - P ko:K03284 - ko00000,ko02000 CorA-like Mg2+ transporter protein
PODMBIKE_00549 1.19e-203 - 3.5.2.6 - V ko:K17836 ko00311,ko01130,ko01501,map00311,map01130,map01501 ko00000,ko00001,ko00002,ko01000,ko01504 Beta-lactamase enzyme family
PODMBIKE_00550 2.88e-32 - - - - - - - -
PODMBIKE_00551 9.52e-128 yobS - - K - - - Bacterial regulatory proteins, tetR family
PODMBIKE_00552 0.0 ydgH - - S ko:K06994 - ko00000 MMPL family
PODMBIKE_00553 1.36e-229 - - - - - - - -
PODMBIKE_00554 2.38e-252 asnA 6.3.1.1 - F ko:K01914 ko00250,ko00460,ko01100,ko01110,ko01230,map00250,map00460,map01100,map01110,map01230 ko00000,ko00001,ko01000 aspartate--ammonia ligase
PODMBIKE_00555 7.21e-39 apl 3.1.3.1 - S ko:K01077 ko00730,ko00790,ko01100,ko02020,map00730,map00790,map01100,map02020 ko00000,ko00001,ko00002,ko00537,ko01000,ko04147 SNARE associated Golgi protein
PODMBIKE_00556 1.37e-08 apl 3.1.3.1 - S ko:K01077 ko00730,ko00790,ko01100,ko02020,map00730,map00790,map01100,map02020 ko00000,ko00001,ko00002,ko00537,ko01000,ko04147 SNARE associated Golgi protein
PODMBIKE_00557 6.47e-110 - - - - - - - -
PODMBIKE_00558 2.08e-105 - - - K - - - GNAT family
PODMBIKE_00559 0.0 prtP 3.4.21.96 - O ko:K01361 - ko00000,ko01000,ko01002,ko03110 Belongs to the peptidase S8 family
PODMBIKE_00560 1.08e-288 patB 4.4.1.8 - E ko:K14155 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 ko00000,ko00001,ko01000,ko01007 Aminotransferase, class I
PODMBIKE_00561 1.52e-210 htpX - - O ko:K03799 - ko00000,ko00002,ko01000,ko01002 Peptidase family M48
PODMBIKE_00562 9.4e-121 - - - GM - - - NmrA-like family
PODMBIKE_00563 5.95e-19 - - - GM - - - NAD(P)H-binding
PODMBIKE_00564 4.87e-101 ywnA - - K - - - Transcriptional regulator
PODMBIKE_00565 1.73e-218 proV - - E ko:K05847 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter, ATP-binding protein
PODMBIKE_00566 0.0 - - - EM ko:K05845,ko:K05846 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Periplasmic glycine betaine choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)
PODMBIKE_00567 0.0 gapN 1.2.1.9 - C ko:K00131 ko00010,ko00030,ko01100,ko01120,ko01200,map00010,map00030,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Belongs to the aldehyde dehydrogenase family
PODMBIKE_00568 3.5e-156 metA 2.3.1.46 - E ko:K00651 ko00270,ko00920,ko01100,ko01110,ko01230,map00270,map00920,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Transfers an acetyl group from acetyl-CoA to
PODMBIKE_00569 2.05e-177 prsW - - S - - - Involved in the degradation of specific anti-sigma factors
PODMBIKE_00570 3.73e-143 pcp 3.4.19.3 - O ko:K01304 - ko00000,ko01000,ko01002 Removes 5-oxoproline from various penultimate amino acid residues except L-proline
PODMBIKE_00571 5.03e-35 - - - - - - - -
PODMBIKE_00572 7.45e-178 - - - - - - - -
PODMBIKE_00573 1.73e-222 - - - - - - - -
PODMBIKE_00574 0.0 rsmF - - J - - - NOL1 NOP2 sun family protein
PODMBIKE_00575 2.24e-201 - - - V - - - LD-carboxypeptidase
PODMBIKE_00577 2.69e-10 - - - D - - - Filamentation induced by cAMP protein fic
PODMBIKE_00578 0.0 - - - L - - - Type III restriction enzyme, res subunit
PODMBIKE_00579 1.55e-169 - - - V - - - site-specific DNA-methyltransferase (adenine-specific) activity
PODMBIKE_00580 5.18e-139 pat 2.3.1.183 - M ko:K03823 ko00440,ko01130,map00440,map01130 ko00000,ko00001,ko01000 Acetyltransferase (GNAT) domain
PODMBIKE_00581 2.31e-182 - - - S - - - Gram-negative-bacterium-type cell wall biogenesis
PODMBIKE_00582 1.47e-137 - - - S - - - YjbR
PODMBIKE_00583 1.27e-187 - 2.7.7.7 - L ko:K02342 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 EXOIII
PODMBIKE_00584 2.38e-273 pbpX - - V - - - Beta-lactamase
PODMBIKE_00585 1.49e-54 - - - L ko:K03530 - ko00000,ko03032,ko03036,ko03400 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
PODMBIKE_00586 1.84e-27 - 5.3.1.6 - G ko:K01808 ko00030,ko00051,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00051,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Ribose/Galactose Isomerase
PODMBIKE_00587 1.22e-15 rpiB2 5.3.1.6 - G ko:K01808 ko00030,ko00051,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00051,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Ribose/Galactose Isomerase
PODMBIKE_00589 4.86e-76 - 2.7.1.180 - H ko:K03734 - ko00000,ko01000 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
PODMBIKE_00590 6.64e-31 - - - P - - - nitric oxide dioxygenase activity
PODMBIKE_00591 3.52e-184 oppA - - E ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter, substratebinding protein
PODMBIKE_00592 4.06e-113 oppA - - E ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter, substratebinding protein
PODMBIKE_00593 1.42e-71 rplL - - J ko:K02935 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
PODMBIKE_00594 1.35e-108 rplJ - - J ko:K02864 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
PODMBIKE_00595 6.72e-302 - - - L ko:K07496 - ko00000 Putative transposase DNA-binding domain
PODMBIKE_00596 5.15e-91 - - - - - - - -
PODMBIKE_00597 3.27e-294 amt - - P ko:K03320 - ko00000,ko02000 ammonium transporter
PODMBIKE_00598 4.93e-243 - - - S - - - Glycosyl transferase family 2
PODMBIKE_00599 4.45e-158 rplA - - J ko:K02863 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
PODMBIKE_00600 3.27e-91 rplK - - J ko:K02867 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
PODMBIKE_00601 5.63e-131 nusG - - K ko:K02601 - ko00000,ko03009,ko03021 Participates in transcription elongation, termination and antitermination
PODMBIKE_00602 3.07e-32 secE - - U ko:K03073 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
PODMBIKE_00603 7.32e-28 rpmG - - J ko:K02913 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL33 family
PODMBIKE_00604 4.55e-161 dxs 2.2.1.7 - H ko:K01662 ko00730,ko00900,ko01100,ko01110,ko01130,map00730,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
PODMBIKE_00605 7.68e-116 dxs 2.2.1.7 - H ko:K01662 ko00730,ko00900,ko01100,ko01110,ko01130,map00730,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
PODMBIKE_00606 2.86e-134 - - - S - - - Alpha/beta hydrolase family
PODMBIKE_00607 3.19e-45 - - - - - - - -
PODMBIKE_00608 5.81e-131 - - - K ko:K03091 - ko00000,ko03021 sigma factor activity
PODMBIKE_00609 1.34e-177 trmH 2.1.1.185 - J ko:K03218 - ko00000,ko01000,ko03009 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PODMBIKE_00610 6.26e-101 mrnC - - J ko:K11145 - ko00000,ko01000,ko03009 Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
PODMBIKE_00611 0.0 cysS 6.1.1.16 - J ko:K01883 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the class-I aminoacyl-tRNA synthetase family
PODMBIKE_00612 7.38e-138 - - - F - - - NUDIX domain
PODMBIKE_00613 1.85e-205 - - - K - - - LysR substrate binding domain
PODMBIKE_00614 2.3e-231 - - - S - - - Conserved hypothetical protein 698
PODMBIKE_00615 0.0 gltX 6.1.1.24 - J ko:K09698 ko00970,ko01100,map00970,map01100 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
PODMBIKE_00617 6.54e-156 - - - V ko:K01990 - ko00000,ko00002,ko02000 ATPases associated with a variety of cellular activities
PODMBIKE_00618 1.26e-79 lexA - - K ko:K07979 - ko00000,ko03000 Transcriptional regulator, GntR family
PODMBIKE_00619 1.35e-07 oppA - - E ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter, substratebinding protein
PODMBIKE_00620 0.0 oppA - - E ko:K02035,ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 Bacterial extracellular solute-binding proteins, family 5 Middle
PODMBIKE_00621 4.83e-163 WQ51_05710 - - S - - - Mitochondrial biogenesis AIM24
PODMBIKE_00622 3.07e-93 - - - K - - - Transcriptional regulator
PODMBIKE_00623 7.68e-60 - - - GM - - - epimerase
PODMBIKE_00627 0.0 - - - D - - - Putative exonuclease SbcCD, C subunit
PODMBIKE_00628 4.96e-76 - - - - - - - -
PODMBIKE_00629 4.75e-79 - 2.3.1.79 - S ko:K00661 - ko00000,ko01000 transferase hexapeptide repeat
PODMBIKE_00630 2.07e-121 - - - S ko:K06889 - ko00000 Hydrolases of the alpha beta superfamily
PODMBIKE_00631 1.84e-56 ylbE - - GM - - - NAD(P)H-binding
PODMBIKE_00632 2.14e-78 ylbE - - GM - - - NAD(P)H-binding
PODMBIKE_00633 6.38e-61 - - - V ko:K06147 - ko00000,ko02000 (ABC) transporter
PODMBIKE_00634 1.07e-213 - - - V ko:K06147,ko:K18890 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Psort location CytoplasmicMembrane, score 10.00
PODMBIKE_00635 5.38e-101 - - - V ko:K18889 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Psort location CytoplasmicMembrane, score
PODMBIKE_00636 5.48e-207 gyaR 1.1.1.26, 1.1.1.399, 1.1.1.95 - CH ko:K00015,ko:K00058 ko00260,ko00630,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00260,map00630,map00680,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PODMBIKE_00637 4.17e-102 - - - K - - - Transcriptional regulator, MarR family
PODMBIKE_00638 0.0 XK27_09600 - - V ko:K06147,ko:K18891 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter, ATP-binding protein
PODMBIKE_00639 0.0 XK27_09605 - - V ko:K18892 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter transmembrane region
PODMBIKE_00640 3.26e-68 XK27_05625 - - P - - - Rhodanese Homology Domain
PODMBIKE_00641 1.95e-85 rnhA 3.1.26.4 - L ko:K03469 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 RNA-DNA hybrid ribonuclease activity
PODMBIKE_00642 2.69e-220 - - - L - - - Resolvase, N-terminal
PODMBIKE_00643 1.74e-63 rnhA 3.1.26.4 - L ko:K03469 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PODMBIKE_00645 7.25e-57 yjdJ - - S ko:K06975 - ko00000 GCN5-related N-acetyl-transferase
PODMBIKE_00646 6.36e-171 - 3.1.3.18 - S ko:K01091 ko00630,ko01100,ko01110,ko01130,map00630,map01100,map01110,map01130 ko00000,ko00001,ko01000 HAD-hyrolase-like
PODMBIKE_00647 2.68e-171 - - - C - - - FAD binding domain
PODMBIKE_00648 0.0 oppA - - E ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter, substratebinding protein
PODMBIKE_00649 6.16e-121 - 3.6.1.13 - L ko:K01515 ko00230,map00230 ko00000,ko00001,ko01000 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes
PODMBIKE_00650 8.06e-299 - - - F - - - Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
PODMBIKE_00651 1.36e-288 - 6.3.4.18, 6.3.5.5 - F ko:K01589,ko:K01955,ko:K16181 ko00230,ko00240,ko00250,ko00300,ko01100,ko01110,ko01120,ko01130,map00230,map00240,map00250,map00300,map01100,map01110,map01120,map01130 ko00000,ko00001,ko00002,ko01000 5-(carboxyamino)imidazole ribonucleotide synthase activity
PODMBIKE_00652 4.53e-203 rfbA 2.7.7.24 - H ko:K00973 ko00521,ko00523,ko00525,ko01130,map00521,map00523,map00525,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
PODMBIKE_00653 6.14e-259 - - - - - - - -
PODMBIKE_00654 4.58e-270 - - - EGP - - - Transmembrane secretion effector
PODMBIKE_00655 9.65e-272 pepQ 3.4.13.9 - E ko:K01271 - ko00000,ko01000,ko01002 Creatinase/Prolidase N-terminal domain
PODMBIKE_00656 1.71e-95 - - - T - - - diguanylate cyclase
PODMBIKE_00657 2.01e-24 - - - T - - - diguanylate cyclase
PODMBIKE_00659 1.77e-142 - - - T - - - EAL domain
PODMBIKE_00660 2.08e-15 - - - T - - - diguanylate cyclase
PODMBIKE_00661 8.49e-111 - - - S - - - ECF-type riboflavin transporter, S component
PODMBIKE_00662 1.71e-142 - 1.1.1.1, 1.2.1.10, 1.2.1.87 - C ko:K04072,ko:K13922 ko00010,ko00071,ko00350,ko00620,ko00625,ko00626,ko00640,ko00650,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00620,map00625,map00626,map00640,map00650,map01100,map01110,map01120,map01130,map01220 ko00000,ko00001,ko01000 Aldehyde dehydrogenase family
PODMBIKE_00663 5.5e-142 - 1.1.1.1, 1.2.1.10, 1.2.1.87 - C ko:K04072,ko:K13922 ko00010,ko00071,ko00350,ko00620,ko00625,ko00626,ko00640,ko00650,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00620,map00625,map00626,map00640,map00650,map01100,map01110,map01120,map01130,map01220 ko00000,ko00001,ko01000 Aldehyde dehydrogenase family
PODMBIKE_00664 3.51e-186 cbiQ - - P ko:K16785 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 cobalt transport
PODMBIKE_00665 0.0 ykoD - - P ko:K16786,ko:K16787 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ABC transporter, ATP-binding protein
PODMBIKE_00666 4.62e-131 - - - S ko:K16924 - ko00000,ko00002,ko02000 UPF0397 protein
PODMBIKE_00667 2.84e-205 XK27_10120 - - K - - - S-adenosyl-l-methionine hydroxide adenosyltransferase
PODMBIKE_00668 0.0 cycA - - E ko:K03293,ko:K11737 - ko00000,ko02000 Amino acid permease
PODMBIKE_00669 0.0 - - - S ko:K01992 - ko00000,ko00002,ko02000 ABC-type transport system involved in multi-copper enzyme maturation permease component
PODMBIKE_00670 1.27e-217 potA5 - - V ko:K01990 - ko00000,ko00002,ko02000 ABC transporter
PODMBIKE_00671 2.84e-77 - - - K ko:K07979 - ko00000,ko03000 helix_turn_helix gluconate operon transcriptional repressor
PODMBIKE_00674 7.57e-10 - - - Q - - - Methyltransferase domain
PODMBIKE_00675 1.32e-14 - - - Q - - - Methyltransferase domain protein
PODMBIKE_00676 4.07e-314 carB - - F - - - Psort location Cytoplasmic, score 8.87
PODMBIKE_00677 0.0 carB - - F - - - Psort location Cytoplasmic, score 8.87
PODMBIKE_00678 4.73e-249 carA 6.3.5.5 - F ko:K01956 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Carbamoyl-phosphate synthetase glutamine chain
PODMBIKE_00679 1.38e-49 - - - T - - - diguanylate cyclase activity
PODMBIKE_00681 6.34e-42 - - - V - - - drug transmembrane transporter activity
PODMBIKE_00682 7.72e-223 - - - V - - - MATE efflux family protein
PODMBIKE_00683 1.01e-95 - - - K - - - 3.5.2 Transcription regulation
PODMBIKE_00684 9.88e-97 - 3.6.4.12 - K ko:K03655 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Putative ATP-dependent DNA helicase recG C-terminal
PODMBIKE_00685 3.01e-137 - - - L - - - Integrase
PODMBIKE_00686 1.49e-102 cylB - - U ko:K11051 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC-2 type transporter
PODMBIKE_00687 3.96e-19 cylB - - V ko:K11051 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC-2 type transporter
PODMBIKE_00688 1.01e-95 - - - S - - - Psort location CytoplasmicMembrane, score
PODMBIKE_00689 2.73e-98 - - - - - - - -
PODMBIKE_00690 2.37e-91 arsC 1.20.4.1 - T ko:K03741 - ko00000,ko01000 Low molecular weight phosphotyrosine protein phosphatase
PODMBIKE_00692 2.02e-168 cysA - - V ko:K02003 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
PODMBIKE_00693 0.0 - - - V ko:K02004 - ko00000,ko00002,ko02000 FtsX-like permease family
PODMBIKE_00694 5.11e-18 - - - C - - - Pyridoxamine 5'-phosphate oxidase
PODMBIKE_00695 4.26e-108 - 1.3.5.4 - C ko:K00244 ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020 ko00000,ko00001,ko00002,ko01000 FAD binding domain
PODMBIKE_00696 3.43e-207 - 1.3.5.4 - C ko:K00244 ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020 ko00000,ko00001,ko00002,ko01000 FAD binding domain
PODMBIKE_00698 1.62e-135 ydaF - - J ko:K03817 - ko00000,ko01000,ko03009 Acetyltransferase (GNAT) domain
PODMBIKE_00699 4.73e-65 - - - S - - - SLAP domain
PODMBIKE_00701 1.01e-104 cydD1 - - V ko:K06147,ko:K06148 - ko00000,ko02000 abc transporter atp-binding protein
PODMBIKE_00702 0.0 sufB - - O ko:K07033,ko:K09014 - ko00000 assembly protein SufB
PODMBIKE_00703 2.66e-97 nifU - - C ko:K04488 - ko00000 SUF system FeS assembly protein, NifU family
PODMBIKE_00704 7.59e-287 sufS 2.8.1.7, 4.4.1.16 - E ko:K11717 ko00450,ko01100,map00450,map01100 ko00000,ko00001,ko01000 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
PODMBIKE_00705 2.93e-280 sufD - - O ko:K07033,ko:K09015 - ko00000 FeS assembly protein SufD
PODMBIKE_00706 4.65e-183 sufC - - O ko:K09013 - ko00000,ko02000 FeS assembly ATPase SufC
PODMBIKE_00707 9.11e-118 yjcF - - S - - - Acetyltransferase (GNAT) domain
PODMBIKE_00708 1.13e-108 ptbA 2.7.1.208 - G ko:K02755,ko:K02777,ko:K20107,ko:K20108 ko00010,ko00500,ko00520,ko02026,ko02060,ko05111,map00010,map00500,map00520,map02026,map02060,map05111 ko00000,ko00001,ko00002,ko01000,ko02000 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
PODMBIKE_00709 8.26e-106 - - - - - - - -
PODMBIKE_00710 6.72e-25 malH 3.2.1.122 GH4 G ko:K01232 ko00500,map00500 ko00000,ko00001,ko01000 Family 4 glycosyl hydrolase C-terminal domain
PODMBIKE_00712 2.2e-151 - - - V ko:K02003 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
PODMBIKE_00713 1.23e-275 - - - S - - - FtsX-like permease family
PODMBIKE_00716 5.92e-102 smpB - - J ko:K03664 - ko00000 the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
PODMBIKE_00717 0.0 rnr - - J ko:K12573 ko03018,map03018 ko00000,ko00001,ko01000,ko03016,ko03019 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
PODMBIKE_00718 1.3e-40 secG - - U ko:K03075 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Preprotein translocase
PODMBIKE_00719 0.0 ltaS 2.7.8.20 - M ko:K19005 ko00561,ko01100,map00561,map01100 ko00000,ko00001,ko01000 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
PODMBIKE_00720 3.8e-228 mprF - - S ko:K07027 - ko00000,ko02000 Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
PODMBIKE_00721 1.06e-256 cpoA 2.4.1.208 GT4 M ko:K13677,ko:K13678 ko00561,ko01100,map00561,map01100 ko00000,ko00001,ko01000,ko01003 Glycosyltransferase, group 1 family protein
PODMBIKE_00722 4e-279 - 2.4.1.337 GT4 M ko:K19002 ko00561,ko01100,map00561,map01100 ko00000,ko00001,ko01000,ko01003 Glycosyl transferase 4-like domain
PODMBIKE_00725 1.8e-119 - - - S ko:K06910 - ko00000 Phosphatidylethanolamine-binding protein
PODMBIKE_00726 8.76e-77 - - - EGP - - - Major Facilitator
PODMBIKE_00727 7.28e-47 - - - EGP - - - Major Facilitator
PODMBIKE_00728 8.82e-155 yjhB 3.6.1.13 - F ko:K01515 ko00230,map00230 ko00000,ko00001,ko01000 NUDIX domain
PODMBIKE_00729 6.56e-16 oppA - - E ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter, substratebinding protein
PODMBIKE_00730 1.76e-90 oppA - - E ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter, substratebinding protein
PODMBIKE_00731 1.66e-178 oppA - - E ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter, substratebinding protein
PODMBIKE_00732 5.07e-61 - - - - - - - -
PODMBIKE_00733 1.13e-84 rpsI - - J ko:K02996 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the universal ribosomal protein uS9 family
PODMBIKE_00734 1.54e-101 rplM - - J ko:K02871 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
PODMBIKE_00735 8.77e-194 truA 5.4.99.12 - J ko:K06173 - ko00000,ko01000,ko03016 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
PODMBIKE_00736 6.07e-182 ecfT - - U ko:K16785 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PODMBIKE_00737 1.41e-207 ecfA2 - - P ko:K16787 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PODMBIKE_00738 4.69e-199 ecfA1 - - P ko:K16786 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PODMBIKE_00739 1.91e-81 rplQ - - J ko:K02879 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal protein L17
PODMBIKE_00740 2.66e-220 rpoA 2.7.7.6 - K ko:K03040 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PODMBIKE_00741 6.6e-83 rpsK - - J ko:K02948 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
PODMBIKE_00742 5.08e-74 rpsM - - J ko:K02952 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
PODMBIKE_00743 3.13e-46 infA - - J ko:K02518 - ko00000,ko03012 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
PODMBIKE_00744 6.92e-155 adk 2.7.4.3 - F ko:K00939 ko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000,ko04147 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
PODMBIKE_00745 5.33e-303 secY - - U ko:K03076 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
PODMBIKE_00746 5.15e-95 rplO - - J ko:K02876 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds to the 23S rRNA
PODMBIKE_00747 1.1e-34 rpmD - - J ko:K02907 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal protein L30
PODMBIKE_00748 4.52e-112 rpsE - - J ko:K02988 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
PODMBIKE_00749 1.55e-74 rplR - - J ko:K02881 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
PODMBIKE_00750 2.92e-120 rplF - - J ko:K02933 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
PODMBIKE_00751 9.28e-89 rpsH - - J ko:K02994 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
PODMBIKE_00752 1.75e-123 rplE - - J ko:K02931 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
PODMBIKE_00753 5.64e-45 rplX - - J ko:K02895 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
PODMBIKE_00754 1.73e-77 rplN - - J ko:K02874 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
PODMBIKE_00755 1.34e-56 rpsQ - - J ko:K02961 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
PODMBIKE_00756 9.34e-34 rpmC - - J ko:K02904 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the universal ribosomal protein uL29 family
PODMBIKE_00757 8.89e-101 rplP - - J ko:K02878 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
PODMBIKE_00758 3.28e-156 rpsC - - J ko:K02982 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
PODMBIKE_00759 3.7e-72 rplV - - J ko:K02890 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
PODMBIKE_00760 1.79e-60 rpsS - - J ko:K02965 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
PODMBIKE_00761 2.82e-198 rplB - - J ko:K02886 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
PODMBIKE_00762 1.72e-59 rplW - - J ko:K02892 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
PODMBIKE_00763 6.65e-138 rplD - - J ko:K02926 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms part of the polypeptide exit tunnel
PODMBIKE_00764 3.42e-142 rplC - - J ko:K02906 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
PODMBIKE_00765 1.55e-66 rpsJ - - J ko:K02946 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Involved in the binding of tRNA to the ribosomes
PODMBIKE_00766 0.0 fusA - - J ko:K02355 - ko00000,ko03012,ko03029 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
PODMBIKE_00767 6.89e-107 rpsG - - J ko:K02992 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
PODMBIKE_00768 2.96e-91 rpsL - - J ko:K02950 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
PODMBIKE_00770 0.0 rpoC 2.7.7.6 - K ko:K03046 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PODMBIKE_00771 0.0 rpoB 2.7.7.6 - K ko:K03043 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PODMBIKE_00774 0.0 clpC - - O ko:K03696 ko01100,map01100 ko00000,ko03110 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
PODMBIKE_00775 9.11e-106 ytsP 1.8.4.14 - T ko:K08968 ko00270,map00270 ko00000,ko00001,ko01000 GAF domain-containing protein
PODMBIKE_00779 3.88e-140 XK27_00160 - - S - - - Domain of unknown function (DUF5052)
PODMBIKE_00780 6.53e-273 metY 2.5.1.49 - E ko:K01740 ko00270,ko01100,map00270,map01100 ko00000,ko00001,ko01000 Catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol
PODMBIKE_00781 4.18e-31 metY 2.5.1.49 - E ko:K01740 ko00270,ko01100,map00270,map01100 ko00000,ko00001,ko01000 o-acetylhomoserine
PODMBIKE_00783 2.69e-178 - - - T ko:K03320 - ko00000,ko02000 GGDEF domain
PODMBIKE_00785 0.0 lysS 6.1.1.6 - J ko:K04567 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the class-II aminoacyl-tRNA synthetase family
PODMBIKE_00786 1.09e-251 dus - - J ko:K05540 - ko00000,ko01000,ko03016 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PODMBIKE_00787 0.0 yqjE 3.4.11.14, 3.4.11.4 - E ko:K01258,ko:K01263 - ko00000,ko01000,ko01002 Cleaves the N-terminal amino acid of tripeptides
PODMBIKE_00788 0.0 oppA - - E ko:K02035,ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter, substratebinding protein
PODMBIKE_00789 2.85e-210 hslO - - O ko:K04083 - ko00000,ko03110 Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
PODMBIKE_00790 0.0 ftsH - - O ko:K03798 - ko00000,ko00002,ko01000,ko01002,ko03110 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
PODMBIKE_00791 0.0 tilS 2.4.2.8, 6.3.4.19 - J ko:K04075,ko:K15780 ko00230,ko01100,ko01110,map00230,map01100,map01110 ko00000,ko00001,ko01000,ko03016 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
PODMBIKE_00792 2.5e-79 - - - J ko:K07571 - ko00000 S1 RNA binding domain
PODMBIKE_00793 1.99e-78 divIC - - D ko:K13052 - ko00000,ko03036 Septum formation initiator
PODMBIKE_00794 1.48e-45 yabO - - J - - - S4 domain protein
PODMBIKE_00795 0.0 mfd - - L ko:K03723 ko03420,map03420 ko00000,ko00001,ko01000,ko03400 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
PODMBIKE_00796 5.2e-132 pth 3.1.1.29 - J ko:K01056 - ko00000,ko01000,ko03012 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
PODMBIKE_00797 9.02e-163 - - - S - - - (CBS) domain
PODMBIKE_00798 6.86e-278 alr 5.1.1.1, 5.1.1.5 - E ko:K01775,ko:K20707 ko00473,ko01100,ko01502,map00473,map01100,map01502 ko00000,ko00001,ko01000,ko01011 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
PODMBIKE_00799 3.58e-93 acpS 2.7.8.7 - I ko:K00997 ko00770,map00770 ko00000,ko00001,ko01000 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
PODMBIKE_00800 0.0 cshA 3.6.4.13 - F ko:K05592 ko03018,map03018 ko00000,ko00001,ko01000,ko03009,ko03019 DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
PODMBIKE_00801 0.0 murF 6.3.2.10 - M ko:K01929 ko00300,ko00550,ko01100,ko01502,map00300,map00550,map01100,map01502 ko00000,ko00001,ko01000,ko01011 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
PODMBIKE_00802 3.27e-55 rpmE - - J ko:K02909 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal protein L31
PODMBIKE_00803 1.26e-306 murA 2.5.1.7 - M ko:K00790 ko00520,ko00550,ko01100,map00520,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PODMBIKE_00804 0.0 pyrG 6.3.4.2 - F ko:K01937 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
PODMBIKE_00805 3.45e-91 rpoE - - K ko:K03048 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 br01611,ko00000,ko00001,ko00002,ko03021,ko03400 Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
PODMBIKE_00806 1.73e-84 - - - S - - - Domain of unknown function (DUF1934)
PODMBIKE_00807 0.0 - - - S ko:K06885 - ko00000 Metal dependent phosphohydrolases with conserved 'HD' motif.
PODMBIKE_00808 1.27e-225 prs 2.7.6.1 - F ko:K00948 ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PODMBIKE_00809 7.9e-60 - - - - - - - -
PODMBIKE_00810 0.0 glmU 2.3.1.157, 2.7.7.23 - M ko:K04042 ko00520,ko01100,ko01130,map00520,map01100,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
PODMBIKE_00811 4.31e-192 purR - - F ko:K09685 - ko00000,ko03000 pur operon repressor
PODMBIKE_00812 4.13e-51 veg - - S - - - Biofilm formation stimulator VEG
PODMBIKE_00813 1.57e-204 ksgA 2.1.1.182 - J ko:K02528 - ko00000,ko01000,ko03009 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
PODMBIKE_00814 3.34e-126 rnmV 3.1.26.8 - J ko:K05985 - ko00000,ko01000 Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
PODMBIKE_00815 5.49e-191 tatD - - L ko:K03424 - ko00000,ko01000 hydrolase, TatD family
PODMBIKE_00816 0.0 metG 6.1.1.10 - J ko:K01874 ko00450,ko00970,map00450,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
PODMBIKE_00817 0.0 mgtA 3.6.3.2 - P ko:K01531 - ko00000,ko01000 COG0474 Cation transport ATPase
PODMBIKE_00818 7.13e-134 - - - S ko:K06872 - ko00000 TPM domain
PODMBIKE_00819 2.79e-117 comEB 3.5.4.12 - F ko:K01493 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000,ko02044 MafB19-like deaminase
PODMBIKE_00820 9.25e-247 trpS 6.1.1.2 - J ko:K01867 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the class-I aminoacyl-tRNA synthetase family
PODMBIKE_00822 7.16e-155 - - - - - - - -
PODMBIKE_00823 3.87e-63 - - - KLT - - - Protein kinase domain
PODMBIKE_00824 5.43e-166 - - - V ko:K01990 - ko00000,ko00002,ko02000 ATPases associated with a variety of cellular activities
PODMBIKE_00825 3.2e-173 - - - V - - - ABC-2 type transporter
PODMBIKE_00826 2.95e-146 - - - E - - - peptidase
PODMBIKE_00828 1.14e-38 - - - S - - - Enterocin A Immunity
PODMBIKE_00829 2.32e-187 - - - F - - - NUDIX domain
PODMBIKE_00830 1.9e-56 - - - L - - - Membrane
PODMBIKE_00831 1.44e-142 - - - - - - - -
PODMBIKE_00832 4.64e-139 pncA - - Q - - - Isochorismatase family
PODMBIKE_00833 6.2e-168 - - - L - - - COG2826 Transposase and inactivated derivatives, IS30 family
PODMBIKE_00834 2.91e-72 - - - L - - - Transposase and inactivated derivatives, IS30 family
PODMBIKE_00835 0.0 nadC2 6.3.4.21 - F ko:K00763 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko01000 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
PODMBIKE_00836 8.99e-104 mscL - - M ko:K03282 - ko00000,ko02000 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
PODMBIKE_00837 5.66e-119 - - - S - - - Sucrose-6F-phosphate phosphohydrolase
PODMBIKE_00838 2.51e-240 ansA 3.5.1.1 - EJ ko:K01424 ko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110 ko00000,ko00001,ko01000 L-asparaginase, type I
PODMBIKE_00839 6.99e-99 - - - K - - - helix_turn_helix multiple antibiotic resistance protein
PODMBIKE_00840 3.02e-67 - - - S - - - Aminoacyl-tRNA editing domain
PODMBIKE_00841 1.75e-11 - - - S - - - Aminoacyl-tRNA editing domain
PODMBIKE_00842 1.67e-222 mmuM 2.1.1.10 - H ko:K00547 ko00270,ko01100,ko01110,map00270,map01100,map01110 ko00000,ko00001,ko01000 homocysteine S-methyltransferase
PODMBIKE_00843 1.29e-122 ybgF - - E ko:K02205,ko:K03293,ko:K16235,ko:K16236 - ko00000,ko02000 amino acid
PODMBIKE_00844 6.14e-79 ybgF - - E ko:K02205,ko:K03293,ko:K16235,ko:K16236 - ko00000,ko02000 amino acid
PODMBIKE_00845 6.97e-216 - 3.6.4.12 - K ko:K03655 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Putative ATP-dependent DNA helicase recG C-terminal
PODMBIKE_00846 0.0 yxbA 6.3.1.12 - S ko:K17810 - ko00000,ko01000 ATP-grasp enzyme
PODMBIKE_00847 7.71e-165 - - - F - - - Phosphorylase superfamily
PODMBIKE_00849 8.54e-164 tcyB - - E ko:K10009 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter
PODMBIKE_00850 5.6e-170 - - - E ko:K10010 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ABC transporter, ATP-binding protein
PODMBIKE_00851 4.74e-177 fliY - - ET ko:K02030,ko:K02424 ko02010,map02010 ko00000,ko00001,ko00002,ko02000,ko02035 Belongs to the bacterial solute-binding protein 3 family
PODMBIKE_00854 2.27e-306 - 3.2.1.86 GT1 G ko:K01223 ko00010,ko00500,map00010,map00500 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 1 family
PODMBIKE_00855 6.77e-145 - - - K - - - Transcriptional regulator
PODMBIKE_00856 0.0 - - - V ko:K06148 - ko00000,ko02000 ABC-type multidrug transport system, ATPase and permease components
PODMBIKE_00857 0.0 - - - KLT - - - Protein kinase domain
PODMBIKE_00858 7.29e-84 - - - S - - - HicB family
PODMBIKE_00859 1.19e-50 - - - S - - - HicA toxin of bacterial toxin-antitoxin,
PODMBIKE_00860 0.0 guaA 6.3.5.2 - F ko:K01951 ko00230,ko00983,ko01100,map00230,map00983,map01100 ko00000,ko00001,ko00002,ko01000,ko01002 Catalyzes the synthesis of GMP from XMP
PODMBIKE_00861 2.95e-263 guaB 1.1.1.205 - F ko:K00088 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko04147 Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
PODMBIKE_00862 1.6e-128 xpt 2.4.2.22 - F ko:K03816 ko00230,ko01100,ko01110,map00230,map01100,map01110 ko00000,ko00001,ko01000 Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
PODMBIKE_00863 5.39e-291 pbuX - - F ko:K03458,ko:K16169 - ko00000,ko02000 xanthine permease
PODMBIKE_00864 6.71e-85 - - - - - - - -
PODMBIKE_00865 0.0 polYB 2.7.7.7 - L ko:K02346,ko:K03502 - ko00000,ko01000,ko03400 Belongs to the DNA polymerase type-Y family
PODMBIKE_00866 4.21e-242 guaC 1.7.1.7 - F ko:K00364 ko00230,map00230 ko00000,ko00001,ko01000 Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
PODMBIKE_00867 9.69e-317 purA 6.3.4.4 - F ko:K01939 ko00230,ko00250,ko01100,map00230,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
PODMBIKE_00868 5.07e-103 greA - - K ko:K03624 - ko00000,ko03021 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PODMBIKE_00869 6.11e-96 - - - O ko:K13993 ko04141,map04141 ko00000,ko00001,ko03110 Belongs to the small heat shock protein (HSP20) family
PODMBIKE_00870 0.0 pepE 3.4.22.40 - E ko:K01372 - ko00000,ko01000,ko01002 Papain family cysteine protease
PODMBIKE_00871 0.0 pepE 3.4.22.40 - E ko:K01372 - ko00000,ko01000,ko01002 aminopeptidase
PODMBIKE_00872 1.33e-227 oppF - - P ko:K10823 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 Belongs to the ABC transporter superfamily
PODMBIKE_00873 2.78e-251 oppD - - P ko:K02031,ko:K15583 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 Belongs to the ABC transporter superfamily
PODMBIKE_00874 3.19e-239 oppC - - EP ko:K15582 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC-type dipeptide oligopeptide nickel transport systems, permease components
PODMBIKE_00875 1.09e-200 oppB - - P ko:K15581 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC-type dipeptide oligopeptide nickel transport systems, permease components
PODMBIKE_00876 0.0 oppA - - E ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter
PODMBIKE_00877 4.57e-143 oppA - - E ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter, substratebinding protein
PODMBIKE_00878 7.18e-161 oppA - - E ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter, substratebinding protein
PODMBIKE_00879 5.19e-42 oppA - - E ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 transmembrane transport
PODMBIKE_00880 0.0 oppA - - E ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter, substratebinding protein
PODMBIKE_00881 3.05e-215 oppA - - E ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter, substratebinding protein
PODMBIKE_00882 1.76e-77 oppA - - E ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter, substratebinding protein
PODMBIKE_00883 9.42e-30 oppA - - E ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter, substratebinding protein
PODMBIKE_00884 1.84e-154 ypgQ - - S ko:K06950 - ko00000 Metal dependent phosphohydrolases with conserved 'HD' motif.
PODMBIKE_00885 7.33e-311 - - - N ko:K09384 - ko00000 Uncharacterized conserved protein (DUF2075)
PODMBIKE_00886 1.65e-245 ybgF - - E ko:K02205,ko:K03293,ko:K16235,ko:K16236 - ko00000,ko02000 amino acid
PODMBIKE_00887 2.29e-297 amd - - E - - - Peptidase family M20/M25/M40
PODMBIKE_00888 7.16e-25 steT - - E ko:K03294 - ko00000 amino acid
PODMBIKE_00889 4.09e-80 - - - S ko:K07006 - ko00000 Pyridoxamine 5'-phosphate oxidase
PODMBIKE_00891 3.23e-308 tyrS 6.1.1.1 - J ko:K01866 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
PODMBIKE_00894 1.03e-204 cjaA - - ET ko:K02030 - ko00000,ko00002,ko02000 ABC transporter substrate-binding protein
PODMBIKE_00895 2.8e-173 glnQ 3.6.3.21 - E ko:K02028 - ko00000,ko00002,ko01000,ko02000 ABC transporter, ATP-binding protein
PODMBIKE_00896 1.39e-121 glnP7 - - P ko:K02029 - ko00000,ko00002,ko02000 ABC transporter permease
PODMBIKE_00897 1.32e-144 glnP9 - - P ko:K02029 - ko00000,ko00002,ko02000 ABC transporter, permease protein
PODMBIKE_00898 8.95e-19 - - - S - - - Uncharacterized protein conserved in bacteria (DUF2255)
PODMBIKE_00899 2.7e-126 - 3.6.1.67 - F ko:K19965 ko00790,map00790 ko00000,ko00001,ko00002,ko01000 NUDIX domain
PODMBIKE_00900 1.44e-255 folP 2.5.1.15 - H ko:K00796 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko00002,ko01000 dihydropteroate synthase
PODMBIKE_00901 9.34e-317 folC 6.3.2.12, 6.3.2.17 - H ko:K11754 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the folylpolyglutamate synthase family
PODMBIKE_00902 1.51e-260 folE 2.7.6.3, 3.5.4.16 - F ko:K00950,ko:K01495 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko00002,ko01000 GTP cyclohydrolase 1
PODMBIKE_00903 8.76e-75 folB 1.13.11.81, 4.1.2.25, 5.1.99.8 - H ko:K01633 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
PODMBIKE_00904 1.61e-68 - - - S - - - Responsible for the incorporation of O-acetyl groups into the enterobacterial common antigen (ECA) trisaccharide repeat units
PODMBIKE_00905 0.0 XK27_08315 - - M - - - Sulfatase
PODMBIKE_00906 1.2e-140 plsY1 2.3.1.15 - I ko:K08591 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko01004 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
PODMBIKE_00907 9.16e-272 brpA - - K - - - Cell envelope-like function transcriptional attenuator common domain protein
PODMBIKE_00908 2.71e-167 gpmA 5.4.2.11 - G ko:K01834 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PODMBIKE_00909 2.38e-171 - - - - - - - -
PODMBIKE_00910 1.12e-88 - - - S - - - Oxidoreductase
PODMBIKE_00911 0.0 yjbQ - - P ko:K03455,ko:K03499 - ko00000,ko02000 TrkA C-terminal domain protein
PODMBIKE_00912 0.0 - 3.2.1.96, 3.5.1.28 GH73 M ko:K01227,ko:K01447,ko:K13714,ko:K13731 ko00511,ko05100,map00511,map05100 ko00000,ko00001,ko01000 N-acetylmuramoyl-L-alanine amidase
PODMBIKE_00913 1.1e-261 - - - NU - - - Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
PODMBIKE_00914 6.35e-46 - - - S - - - Protein of unknown function (DUF2922)
PODMBIKE_00915 3.54e-39 - - - - - - - -
PODMBIKE_00916 3.3e-158 - - - - - - - -
PODMBIKE_00917 2.42e-96 - - - - - - - -
PODMBIKE_00918 0.0 kup - - P ko:K03549 - ko00000,ko02000 Transport of potassium into the cell
PODMBIKE_00919 0.0 pepO - - O ko:K07386 - ko00000,ko01000,ko01002 Peptidase family M13
PODMBIKE_00920 2.18e-82 - - - O - - - Glutaredoxin-related protein
PODMBIKE_00921 3.93e-290 yqjV - - EGP - - - Major Facilitator Superfamily
PODMBIKE_00922 1.38e-49 XK27_04775 - - P ko:K09155 - ko00000 Hemerythrin HHE cation binding domain protein
PODMBIKE_00923 1.61e-44 yitW - - S - - - Iron-sulfur cluster assembly protein
PODMBIKE_00924 6.18e-183 nrdG 1.97.1.4 - O ko:K04068 - ko00000,ko01000 Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PODMBIKE_00925 0.0 nrdD 1.1.98.6 - F ko:K21636 ko00230,ko00240,ko01100,map00230,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Ribonucleoside-triphosphate reductase
PODMBIKE_00926 5.46e-315 yxbA 6.3.1.12 - S ko:K17810 - ko00000,ko01000 ATP-grasp enzyme
PODMBIKE_00927 0.0 asnB 6.3.5.4 - E ko:K01953 ko00250,ko01100,ko01110,map00250,map01100,map01110 ko00000,ko00001,ko01000,ko01002 Asparagine synthase
PODMBIKE_00928 0.0 - - - S - - - Calcineurin-like phosphoesterase
PODMBIKE_00929 3e-108 - - - - - - - -
PODMBIKE_00930 1.42e-11 oppA - - E ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter, substratebinding protein
PODMBIKE_00931 0.0 oppA - - E ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter, substratebinding protein
PODMBIKE_00932 9.06e-191 - - - P ko:K02042 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
PODMBIKE_00933 1.59e-173 phnB - - P ko:K02042 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
PODMBIKE_00934 2.39e-179 phnC 3.6.3.28 - P ko:K02041 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
PODMBIKE_00935 4.69e-210 phnD - - P ko:K02044 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Phosphonate ABC transporter
PODMBIKE_00936 3.83e-109 usp5 - - T - - - universal stress protein
PODMBIKE_00937 3.05e-191 - 3.1.3.48 - T ko:K01104 - ko00000,ko01000 Tyrosine phosphatase family
PODMBIKE_00938 3.14e-109 - 2.7.1.200, 2.7.1.204 - G ko:K02773,ko:K20112 ko00052,ko01100,ko02060,map00052,map01100,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PODMBIKE_00939 2.59e-116 ntd 2.4.2.6 - F ko:K08728 ko00240,map00240 ko00000,ko00001,ko01000 Nucleoside
PODMBIKE_00940 7.2e-283 nagA 3.5.1.25 - G ko:K01443 ko00520,ko01130,map00520,map01130 ko00000,ko00001,ko01000 Belongs to the metallo-dependent hydrolases superfamily. NagA family
PODMBIKE_00941 0.0 - - - G - - - Belongs to the glycosyl hydrolase 31 family
PODMBIKE_00942 2.65e-186 malG - - P ko:K15772 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter permease
PODMBIKE_00943 5.02e-128 malF - - P ko:K15771 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
PODMBIKE_00944 2.52e-110 dexB 3.2.1.70 - G ko:K01215 - ko00000,ko01000 Alpha amylase, catalytic domain protein
PODMBIKE_00945 1.54e-216 - - - I - - - alpha/beta hydrolase fold
PODMBIKE_00946 2.81e-166 yibF - - S - - - overlaps another CDS with the same product name
PODMBIKE_00947 6.42e-243 yibE - - S - - - overlaps another CDS with the same product name
PODMBIKE_00949 3.31e-262 ddl 6.3.2.4 - F ko:K01921 ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502 ko00000,ko00001,ko01000,ko01011 Belongs to the D-alanine--D-alanine ligase family
PODMBIKE_00950 3.76e-265 - - - S - - - Cysteine-rich secretory protein family
PODMBIKE_00951 2.41e-150 crp2 - - K ko:K10914,ko:K21562 ko02020,ko02024,ko02025,ko02026,ko05111,map02020,map02024,map02025,map02026,map05111 ko00000,ko00001,ko03000 helix_turn_helix, cAMP Regulatory protein
PODMBIKE_00952 1.67e-185 - - - - - - - -
PODMBIKE_00953 2.31e-162 - - - K - - - Bacterial regulatory proteins, tetR family
PODMBIKE_00954 2.95e-237 prs2 2.7.6.1 - F ko:K00948 ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PODMBIKE_00955 1.92e-162 - - - S - - - Alpha/beta hydrolase family
PODMBIKE_00956 2.85e-205 epsV - - S - - - glycosyl transferase family 2
PODMBIKE_00957 1.62e-208 - - - S - - - Protein of unknown function (DUF1002)
PODMBIKE_00958 2.48e-176 rnhA 3.1.26.4 - L ko:K03469 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PODMBIKE_00959 1.9e-230 - - - S - - - Alpha/beta hydrolase of unknown function (DUF915)
PODMBIKE_00960 0.0 cls - - I ko:K06131 ko00564,ko01100,map00564,map01100 ko00000,ko00001,ko01000 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PODMBIKE_00961 5e-106 - - - - - - - -
PODMBIKE_00962 1.24e-169 cobB - - K ko:K12410 - ko00000,ko01000 SIR2 family
PODMBIKE_00963 3.9e-88 yeaO - - S - - - Protein of unknown function, DUF488
PODMBIKE_00964 1.26e-157 yxlJ 3.2.2.21 - L ko:K03652 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 Belongs to the DNA glycosylase MPG family
PODMBIKE_00965 0.0 XK27_05795 - - P ko:K17073,ko:K17074 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter permease
PODMBIKE_00966 2.81e-181 glnQ - - E ko:K17076 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ABC transporter, ATP-binding protein
PODMBIKE_00967 4.91e-154 - - - M ko:K21471 - ko00000,ko01000,ko01002,ko01011 NlpC P60 family protein
PODMBIKE_00968 2.28e-221 - - - L - - - HNH nucleases
PODMBIKE_00969 2.02e-23 - - - - - - - -
PODMBIKE_00970 5.3e-245 ysdE - - P - - - Citrate transporter
PODMBIKE_00971 1.67e-123 lemA - - S ko:K03744 - ko00000 LemA family
PODMBIKE_00972 5.3e-209 htpX - - O ko:K03799 - ko00000,ko00002,ko01000,ko01002 Belongs to the peptidase M48B family
PODMBIKE_00973 3.42e-195 mutR - - K - - - Helix-turn-helix XRE-family like proteins
PODMBIKE_00974 4.84e-284 - - - S ko:K09136 - ko00000,ko03009 ATP diphosphatase activity
PODMBIKE_00976 3.8e-175 - - - S ko:K01992 - ko00000,ko00002,ko02000 ABC-2 family transporter protein
PODMBIKE_00977 2.22e-155 - - - S ko:K01992 - ko00000,ko00002,ko02000 ABC-2 family transporter protein
PODMBIKE_00978 4.6e-220 - - - S ko:K01990 - ko00000,ko00002,ko02000 ABC transporter
PODMBIKE_00979 1.06e-195 - - - K - - - helix_turn_helix, arabinose operon control protein
PODMBIKE_00980 0.0 qacA - - EGP - - - Major Facilitator
PODMBIKE_00981 0.0 - - - S ko:K16786,ko:K16787 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ABC transporter, ATP-binding protein
PODMBIKE_00982 7.38e-148 - - - P ko:K16785 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Cobalt transport protein
PODMBIKE_00983 1.11e-25 - - - L - - - transposase and inactivated derivatives, IS30 family
PODMBIKE_00984 4.93e-49 - - - L - - - transposase and inactivated derivatives, IS30 family
PODMBIKE_00985 5.35e-81 - - - S ko:K07006 - ko00000 Pyridoxamine 5'-phosphate oxidase
PODMBIKE_00990 8.64e-107 rlmH 2.1.1.177 - J ko:K00783 - ko00000,ko01000,ko03009 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
PODMBIKE_00991 1.29e-239 htrA 3.4.21.107 - O ko:K04771 ko01503,ko02020,map01503,map02020 ko00000,ko00001,ko00002,ko01000,ko01002,ko03110 serine protease
PODMBIKE_00992 6.41e-193 vicX 3.1.26.11 - S ko:K00784 ko03013,map03013 ko00000,ko00001,ko01000,ko03016 domain protein
PODMBIKE_00993 3.96e-183 yycI - - S - - - YycH protein
PODMBIKE_00994 0.0 yycH - - S - - - YycH protein
PODMBIKE_00995 0.0 vicK 2.7.13.3 - T ko:K07652 ko02020,map02020 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Histidine kinase
PODMBIKE_00996 3.81e-169 yycF - - K ko:K07668 ko02020,map02020 ko00000,ko00001,ko00002,ko02022 response regulator
PODMBIKE_00998 1.07e-192 - - - I - - - Acyl-transferase
PODMBIKE_00999 1.25e-199 arbx - - M - - - Glycosyl transferase family 8
PODMBIKE_01000 9.99e-127 - - - M - - - Glycosyl transferase family 8
PODMBIKE_01001 9.24e-213 arbZ - - I - - - Phosphate acyltransferases
PODMBIKE_01002 0.0 - 1.3.5.4 - C ko:K00244 ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020 ko00000,ko00001,ko00002,ko01000 FAD binding domain
PODMBIKE_01003 6.06e-222 - - - K - - - Transcriptional regulator, LysR family
PODMBIKE_01004 3.33e-111 ydiN - - C ko:K03762 - ko00000,ko02000 succinate dehydrogenase
PODMBIKE_01005 6.36e-67 - - - EGP - - - Major Facilitator Superfamily
PODMBIKE_01006 3.15e-126 - - - S - - - Membrane
PODMBIKE_01007 3.87e-282 - - - EGP ko:K08196 - ko00000,ko02000 Major Facilitator
PODMBIKE_01008 4.37e-212 ldh 1.1.1.27 - C ko:K00016 ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922 ko00000,ko00001,ko01000,ko04147 Belongs to the LDH MDH superfamily. LDH family
PODMBIKE_01009 5.37e-220 glcK 2.7.1.2 - G ko:K00845 ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Glucokinase
PODMBIKE_01011 3.39e-277 metE 2.1.1.14 - E ko:K00549 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 methionine synthase, vitamin-B12 independent
PODMBIKE_01012 7.29e-214 cpsY - - K - - - Transcriptional regulator, LysR family
PODMBIKE_01013 1.06e-166 - - - - - - - -
PODMBIKE_01014 0.0 mutS1 - - L ko:K07456 ko03430,map03430 ko00000,ko00001,ko03400 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
PODMBIKE_01015 0.0 - - - V ko:K06148 - ko00000,ko02000 ABC-type multidrug transport system, ATPase and permease components
PODMBIKE_01016 0.0 - - - V ko:K06148 - ko00000,ko02000 ABC-type multidrug transport system, ATPase and permease components
PODMBIKE_01017 1.39e-17 - 1.3.8.1, 1.3.8.7 - I ko:K00248,ko:K00249,ko:K18244 ko00071,ko00280,ko00410,ko00640,ko00650,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko03320,map00071,map00280,map00410,map00640,map00650,map01100,map01110,map01120,map01130,map01200,map01212,map03320 ko00000,ko00001,ko00002,ko01000 Acyl-CoA dehydrogenase, C-terminal domain
PODMBIKE_01018 1.55e-52 - - - L - - - Transposase and inactivated derivatives, IS30 family
PODMBIKE_01019 9.4e-167 - - - L - - - Transposase and inactivated derivatives, IS30 family
PODMBIKE_01021 2.87e-43 bgl 3.2.1.21, 3.2.1.86 GT1 G ko:K01223,ko:K05350 ko00010,ko00460,ko00500,ko00940,ko01100,ko01110,map00010,map00460,map00500,map00940,map01100,map01110 ko00000,ko00001,ko01000 beta-glucosidase activity
PODMBIKE_01022 7.3e-248 manA 5.3.1.8 - G ko:K01809 ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 mannose-6-phosphate isomerase
PODMBIKE_01023 3.6e-38 scrK 2.7.1.2, 2.7.1.4 - GK ko:K00845,ko:K00847 ko00010,ko00051,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00051,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 ROK family
PODMBIKE_01026 3.54e-180 - - - - - - - -
PODMBIKE_01028 1.81e-109 - - - K - - - DNA-templated transcription, initiation
PODMBIKE_01030 2.5e-173 glpF - - U ko:K02440 - ko00000,ko02000 Belongs to the MIP aquaporin (TC 1.A.8) family
PODMBIKE_01031 6.02e-207 gtfA 2.4.1.7 GH13 G ko:K00690 ko00500,map00500 ko00000,ko00001,ko01000 Sucrose glucosyltransferase
PODMBIKE_01032 0.0 - - - S - - - Bacterial membrane protein, YfhO
PODMBIKE_01033 6.42e-229 yfdH - GT2 M ko:K12999,ko:K20534 - ko00000,ko01000,ko01003,ko01005,ko02000 Glycosyltransferase like family 2
PODMBIKE_01034 1.64e-120 - - - K - - - Domain of unknown function (DUF1836)
PODMBIKE_01035 6.89e-188 yitS - - S - - - EDD domain protein, DegV family
PODMBIKE_01036 1.62e-133 - - - T - - - EAL domain
PODMBIKE_01037 4.57e-135 - - - E - - - GDSL-like Lipase/Acylhydrolase
PODMBIKE_01038 1.92e-161 pgm7 - - G - - - Phosphoglycerate mutase family
PODMBIKE_01039 4.69e-17 - - - - - - - -
PODMBIKE_01040 2.85e-153 - - - - - - - -
PODMBIKE_01041 8.4e-56 - - - - - - - -
PODMBIKE_01042 9.27e-115 - - - S ko:K03523 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 biotin transmembrane transporter activity
PODMBIKE_01043 1.19e-66 luxA_2 - - C - - - Coenzyme F420-dependent N5N10-methylene tetrahydromethanopterin reductase
PODMBIKE_01044 1e-57 - - - C - - - COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
PODMBIKE_01045 6.13e-234 - 1.1.1.94 - I ko:K00057 ko00564,ko01110,map00564,map01110 ko00000,ko00001,ko01000 Rossmann-like domain
PODMBIKE_01046 1.33e-75 - - - K - - - sequence-specific DNA binding
PODMBIKE_01047 1.39e-129 - - - - - - - -
PODMBIKE_01048 3.62e-95 - - - F ko:K15051 - ko00000 DNA/RNA non-specific endonuclease
PODMBIKE_01050 2.62e-246 brpA - - K - - - Cell envelope-like function transcriptional attenuator common domain protein
PODMBIKE_01051 2.23e-86 - - - S - - - Core-2/I-Branching enzyme
PODMBIKE_01052 4.46e-99 - - - S - - - Core-2/I-Branching enzyme
PODMBIKE_01053 2.19e-152 rfbP - - M ko:K13012,ko:K19428 - ko00000,ko01000,ko01005 Bacterial sugar transferase
PODMBIKE_01054 3.06e-192 cps3J - - M - - - Domain of unknown function (DUF4422)
PODMBIKE_01055 1.44e-281 glf 5.4.99.9 - M ko:K01854 ko00052,ko00520,map00052,map00520 ko00000,ko00001,ko01000 UDP-galactopyranose mutase
PODMBIKE_01056 1.33e-136 cps1C - - S ko:K03328 - ko00000 Membrane protein involved in the export of O-antigen and teichoic acid
PODMBIKE_01057 2.29e-107 cps1C - - S ko:K03328 - ko00000 Membrane protein involved in the export of O-antigen and teichoic acid
PODMBIKE_01059 1.67e-120 - - - L - - - the current gene model (or a revised gene model) may contain a frame shift
PODMBIKE_01060 1.08e-36 - - - L - - - Transposase
PODMBIKE_01061 1.38e-37 - - - - - - - -
PODMBIKE_01063 5.89e-200 - - - S ko:K01989 - ko00000,ko00002,ko02000 ABC transporter
PODMBIKE_01064 6.63e-125 - - - S ko:K05833 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
PODMBIKE_01065 6.87e-102 msrB 1.8.4.12 - O ko:K07305 - ko00000,ko01000 peptide methionine sulfoxide reductase
PODMBIKE_01067 2.5e-09 rfbD 1.1.1.133 - M ko:K00067 ko00521,ko00523,ko01130,map00521,map00523,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
PODMBIKE_01068 9.72e-254 rfbB 4.2.1.46 - M ko:K01710 ko00521,ko00523,ko00525,ko01055,ko01130,map00521,map00523,map00525,map01055,map01130 ko00000,ko00001,ko00002,ko01000 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
PODMBIKE_01069 1.24e-72 XK27_02085 - - K - - - Bacterial regulatory proteins, tetR family
PODMBIKE_01070 4.4e-14 - - - - - - - -
PODMBIKE_01071 9.7e-37 - - - L - - - transposase activity
PODMBIKE_01072 2.63e-146 - - - S ko:K03328 - ko00000 Membrane protein involved in the export of O-antigen and teichoic acid
PODMBIKE_01073 4.4e-20 B4168_4126 - - L ko:K07493 - ko00000 Transposase
PODMBIKE_01074 1.6e-127 - - - S - - - Cob(I)alamin adenosyltransferase
PODMBIKE_01075 5.84e-123 - - - S ko:K16927 - ko00000,ko00002,ko02000 ECF transporter, substrate-specific component
PODMBIKE_01077 0.0 rtpR 1.17.4.2 - F ko:K00527 ko00230,ko00240,ko01100,map00230,map00240,map01100 ko00000,ko00001,ko00002,ko01000 ribonucleoside-triphosphate reductase activity
PODMBIKE_01078 2.09e-208 yvgN - - C - - - Aldo keto reductase
PODMBIKE_01079 2.11e-221 - 1.1.1.27 - C ko:K00016 ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922 ko00000,ko00001,ko01000,ko04147 Belongs to the LDH MDH superfamily
PODMBIKE_01080 3.81e-105 - - - - - - - -
PODMBIKE_01081 2.64e-206 xth 3.1.11.2 - L ko:K01142 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 exodeoxyribonuclease III
PODMBIKE_01082 1.91e-78 - - - S - - - glycolate biosynthetic process
PODMBIKE_01083 2.73e-23 nt5e 3.1.3.18 - L ko:K01091 ko00630,ko01100,ko01110,ko01130,map00630,map01100,map01110,map01130 ko00000,ko00001,ko01000 haloacid dehalogenase-like hydrolase
PODMBIKE_01084 3.57e-176 ysaA 3.1.3.5, 3.8.1.2 - S ko:K01560,ko:K07025,ko:K08723 ko00230,ko00240,ko00361,ko00625,ko00760,ko01100,ko01110,ko01120,map00230,map00240,map00361,map00625,map00760,map01100,map01110,map01120 ko00000,ko00001,ko01000 Haloacid dehalogenase-like hydrolase
PODMBIKE_01085 5.49e-237 dapF 5.1.1.7 - E ko:K01778 ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
PODMBIKE_01086 0.0 lysC 2.7.2.4 - E ko:K00928 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the aspartokinase family
PODMBIKE_01087 1.29e-114 dapH 2.3.1.117, 2.3.1.89 - E ko:K00674,ko:K05822 ko00300,ko01100,ko01110,ko01120,ko01230,map00300,map01100,map01110,map01120,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
PODMBIKE_01088 3.15e-278 hipO 3.5.1.47 - E ko:K05823 ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000,ko01002 Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
PODMBIKE_01089 1.22e-219 dapA 4.3.3.7 - E ko:K01714 ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
PODMBIKE_01090 6.61e-183 dapB 1.17.1.8 - E ko:K00215 ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
PODMBIKE_01091 6.94e-282 aspC - - E ko:K00841 ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Aminotransferase
PODMBIKE_01092 5.57e-141 ppiB 5.2.1.8 - G ko:K03768 - ko00000,ko01000,ko03110 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
PODMBIKE_01093 2.65e-228 - - - - - - - -
PODMBIKE_01094 4.88e-88 pps 2.7.9.2 - H ko:K01007 ko00620,ko00680,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate
PODMBIKE_01095 9.16e-69 pps 2.7.9.2 - H ko:K01007 ko00620,ko00680,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate
PODMBIKE_01096 3.09e-208 pps 2.7.9.2 - H ko:K01007 ko00620,ko00680,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate
PODMBIKE_01097 4.35e-79 - 2.7.9.2 - G ko:K01007 ko00620,ko00680,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Pyruvate phosphate dikinase, PEP/pyruvate binding domain
PODMBIKE_01098 2.03e-73 ppsA 2.7.9.2 - G ko:K01007 ko00620,ko00680,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Belongs to the PEP-utilizing enzyme family
PODMBIKE_01099 0.0 ytgP - - S ko:K03328 - ko00000 Polysaccharide biosynthesis protein
PODMBIKE_01100 0.0 leuS 6.1.1.4 - J ko:K01869 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Belongs to the class-I aminoacyl-tRNA synthetase family
PODMBIKE_01101 8.34e-196 - - - S - - - Protein of unknown function (DUF3298)
PODMBIKE_01102 8.27e-130 - - - K ko:K03088 - ko00000,ko03021 Sigma-70 region 2
PODMBIKE_01103 0.0 serS 6.1.1.11 - J ko:K01875 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
PODMBIKE_01104 1.95e-119 yjcK 2.3.1.128 - J ko:K03790 - ko00000,ko01000,ko03009 Acetyltransferase (GNAT) domain
PODMBIKE_01105 5.99e-137 - - - S - - - SNARE associated Golgi protein
PODMBIKE_01106 9.49e-196 - - - I - - - alpha/beta hydrolase fold
PODMBIKE_01107 2.83e-202 plcR - - K ko:K20480 ko02024,map02024 ko00000,ko00001,ko03000 Helix-turn-helix
PODMBIKE_01108 1.32e-122 - 2.4.2.6 - F ko:K08728 ko00240,map00240 ko00000,ko00001,ko01000 Nucleoside 2-deoxyribosyltransferase
PODMBIKE_01109 3.44e-167 - - - F - - - glutamine amidotransferase
PODMBIKE_01110 5.18e-23 - - - L - - - Transposase and inactivated derivatives, IS30 family
PODMBIKE_01111 4.73e-138 galR - - K ko:K02529 - ko00000,ko03000 Transcriptional regulator
PODMBIKE_01112 4.25e-36 - - - K ko:K02529 - ko00000,ko03000 purine nucleotide biosynthetic process
PODMBIKE_01113 0.0 lacL 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 2 family
PODMBIKE_01114 0.0 lacS - - G ko:K11104,ko:K16209 - ko00000,ko02000 Transporter
PODMBIKE_01115 7.25e-240 ldhA 1.1.1.28 - C ko:K03778,ko:K18347 ko00620,ko01120,ko01502,ko02020,map00620,map01120,map01502,map02020 ko00000,ko00001,ko00002,ko01000,ko01504 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PODMBIKE_01116 0.0 loxD 1.1.3.15 - C ko:K00104 ko00630,ko01100,ko01110,ko01120,ko01130,map00630,map01100,map01110,map01120,map01130 ko00000,ko00001,ko01000 FAD linked oxidases, C-terminal domain
PODMBIKE_01117 1.23e-96 def2 3.5.1.88 - J ko:K01462 - ko00000,ko01000 Removes the formyl group from the N-terminal Met of newly synthesized proteins
PODMBIKE_01118 3.02e-180 metQ1 - - P ko:K02073 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Belongs to the nlpA lipoprotein family
PODMBIKE_01119 2.13e-116 luxS 4.4.1.21 - H ko:K07173 ko00270,ko01100,ko01230,ko02024,ko02026,ko05111,map00270,map01100,map01230,map02024,map02026,map05111 ko00000,ko00001,ko00002,ko01000 Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
PODMBIKE_01136 6.18e-293 arcD - - E ko:K03758 - ko00000,ko02000 Arginine ornithine antiporter
PODMBIKE_01137 7.8e-09 XK27_07210 - - S - - - B3 4 domain
PODMBIKE_01138 1.62e-266 - - - S - - - amidohydrolase
PODMBIKE_01139 0.000745 - - - S - - - Amidohydrolase family
PODMBIKE_01140 8.03e-275 - - - EGP - - - Major Facilitator
PODMBIKE_01141 0.0 pepX 3.4.14.11 - E ko:K01281 - ko00000,ko01000,ko01002 Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
PODMBIKE_01143 0.0 traI 5.99.1.2 - L ko:K03169 - ko00000,ko01000,ko03032 This gene contains a nucleotide ambiguity which may be the result of a sequencing error
PODMBIKE_01144 0.0 - - - S - - - SH3-like domain
PODMBIKE_01145 3.99e-67 - - - - - - - -
PODMBIKE_01146 3.7e-47 - - - - - - - -
PODMBIKE_01147 2.9e-99 - - - - - - - -
PODMBIKE_01148 9.28e-272 - - - EGP - - - Major Facilitator Superfamily
PODMBIKE_01149 1.66e-55 - - - S - - - Uncharacterized protein conserved in bacteria (DUF2087)
PODMBIKE_01150 6.03e-109 purE 5.4.99.18 - F ko:K01588 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
PODMBIKE_01151 1.94e-270 purK 6.3.4.18 - F ko:K01589 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
PODMBIKE_01152 0.0 purB 4.3.2.2 - F ko:K01756 ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
PODMBIKE_01153 5.04e-173 purC 6.3.2.6 - F ko:K01923 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Belongs to the SAICAR synthetase family
PODMBIKE_01154 8.7e-52 purS 6.3.5.3 - F ko:K01952 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PODMBIKE_01155 1.98e-162 purQ 6.3.5.3 - F ko:K01952 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PODMBIKE_01156 0.0 purL 6.3.5.3 - F ko:K01952 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PODMBIKE_01157 0.0 purF 2.4.2.14 - F ko:K00764 ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000,ko01002 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
PODMBIKE_01158 2.39e-253 purM 6.3.3.1 - F ko:K01933 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Phosphoribosylformylglycinamidine cyclo-ligase
PODMBIKE_01159 1.17e-141 purN 2.1.2.2 - F ko:K11175 ko00230,ko00670,ko01100,ko01110,ko01130,map00230,map00670,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
PODMBIKE_01160 0.0 purH 2.1.2.3, 3.5.4.10 - F ko:K00602 ko00230,ko00670,ko01100,ko01110,ko01130,ko01523,map00230,map00670,map01100,map01110,map01130,map01523 ko00000,ko00001,ko00002,ko01000,ko04147 Bifunctional purine biosynthesis protein PurH
PODMBIKE_01161 1.87e-307 purD 6.3.4.13 - F ko:K01945 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Belongs to the GARS family
PODMBIKE_01162 3.41e-73 livF - - E ko:K01996 ko02010,ko02024,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter
PODMBIKE_01163 1.1e-119 metB 2.5.1.48 - E ko:K01739 ko00270,ko00450,ko00920,ko01100,ko01110,ko01130,ko01230,map00270,map00450,map00920,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Cys/Met metabolism PLP-dependent enzyme
PODMBIKE_01164 6.33e-87 yusI 1.20.4.1 - P ko:K00537 - ko00000,ko01000 Belongs to the ArsC family
PODMBIKE_01165 5.61e-65 rplU - - J ko:K02888 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This protein binds to 23S rRNA in the presence of protein L20
PODMBIKE_01166 3.79e-64 rpmA - - J ko:K02899 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL27 family
PODMBIKE_01167 5.66e-257 pepP 3.4.11.9, 3.4.13.9 - E ko:K01262,ko:K01271 - ko00000,ko01000,ko01002 Creatinase/Prolidase N-terminal domain
PODMBIKE_01168 3.92e-131 efp - - J ko:K02356 - ko00000,ko03012 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
PODMBIKE_01169 6.3e-95 WQ51_04310 - - S ko:K10947 - ko00000,ko03000 Asp23 family, cell envelope-related function
PODMBIKE_01170 7.64e-88 nusB - - K ko:K03625 - ko00000,ko03009,ko03021 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
PODMBIKE_01171 4.56e-198 folD 1.5.1.5, 3.5.4.9 - F ko:K01491 ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
PODMBIKE_01172 0.0 xseA 3.1.11.6 - L ko:K03601 ko03430,map03430 ko00000,ko00001,ko01000,ko03400 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PODMBIKE_01173 2.38e-43 xseB 3.1.11.6 - L ko:K03602 ko03430,map03430 ko00000,ko00001,ko01000,ko03400 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PODMBIKE_01174 1.16e-206 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29 - H ko:K13789 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000,ko01006 Belongs to the FPP GGPP synthase family
PODMBIKE_01175 5.49e-197 rrmJ 2.1.1.226, 2.1.1.227 - J ko:K06442 - ko00000,ko01000,ko03009 Ribosomal RNA large subunit methyltransferase J
PODMBIKE_01176 0.0 recN - - L ko:K03631 - ko00000,ko03400 May be involved in recombinational repair of damaged DNA
PODMBIKE_01177 6.86e-61 oppA - - E ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 transmembrane transport
PODMBIKE_01178 1.2e-17 oppA - - E ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter, substratebinding protein
PODMBIKE_01179 6.8e-46 oppA - - E ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 transmembrane transport
PODMBIKE_01180 8.37e-66 - - - - - - - -
PODMBIKE_01181 2.84e-143 gmk 2.7.4.8 - F ko:K00942 ko00230,ko01100,map00230,map01100 ko00000,ko00001,ko00002,ko01000 Essential for recycling GMP and indirectly, cGMP
PODMBIKE_01182 1.28e-45 rpoZ 2.7.7.6 - K ko:K03060 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
PODMBIKE_01183 0.0 priA - - L ko:K04066 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
PODMBIKE_01184 3e-223 fmt 2.1.2.9 - J ko:K00604 ko00670,ko00970,map00670,map00970 ko00000,ko00001,ko01000 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
PODMBIKE_01185 2.69e-311 sun 2.1.1.176 - J ko:K03500 - ko00000,ko01000,ko03009 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
PODMBIKE_01186 2.69e-178 stp 3.1.3.16 - T ko:K20074 - ko00000,ko01000,ko01009 phosphatase
PODMBIKE_01187 0.0 prkC 2.7.11.1 - KLT ko:K08884,ko:K12132 - ko00000,ko01000,ko01001 serine threonine protein kinase
PODMBIKE_01188 7.01e-213 rsgA 3.1.3.100 - S ko:K06949 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko01000,ko03009 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
PODMBIKE_01189 5.26e-164 thiN 2.7.6.2 - H ko:K00949 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko01000 thiamine pyrophosphokinase
PODMBIKE_01194 0.0 - - - V - - - ABC transporter transmembrane region
PODMBIKE_01195 3.26e-36 rpmB - - J ko:K02902 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL28 family
PODMBIKE_01196 1.67e-74 yloU - - S - - - Asp23 family, cell envelope-related function
PODMBIKE_01197 0.0 yloV - - S ko:K07030 - ko00000 DAK2 domain fusion protein YloV
PODMBIKE_01198 0.0 recG 3.6.4.12 - L ko:K03655 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
PODMBIKE_01199 3.56e-234 plsX 2.3.1.15 - I ko:K03621 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko01004 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
PODMBIKE_01200 1.31e-48 acpP - - IQ ko:K02078 - ko00000,ko00001 Carrier of the growing fatty acid chain in fatty acid biosynthesis
PODMBIKE_01201 3.75e-242 oppD - - P ko:K02031,ko:K15583 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 Belongs to the ABC transporter superfamily
PODMBIKE_01202 3.53e-228 oppF - - P ko:K02032 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 Belongs to the ABC transporter superfamily
PODMBIKE_01203 2.21e-227 oppB - - P ko:K02033,ko:K02034 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter permease
PODMBIKE_01204 4.18e-208 oppC5 - - P ko:K02034 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
PODMBIKE_01205 0.0 oppA - - E ko:K02035 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter substrate-binding protein
PODMBIKE_01206 0.0 oppA - - E ko:K02035 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter substrate-binding protein
PODMBIKE_01207 2.5e-164 rnc 3.1.26.3 - J ko:K03685 ko03008,ko05205,map03008,map05205 ko00000,ko00001,ko01000,ko03009,ko03019,ko03036 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
PODMBIKE_01208 0.0 smc - - D ko:K03529 - ko00000,ko03036 Required for chromosome condensation and partitioning
PODMBIKE_01209 6.49e-210 ftsY - - U ko:K03110 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
PODMBIKE_01210 4.4e-34 pepD2 - - E ko:K08659 - ko00000,ko01000,ko01002 Dipeptidase
PODMBIKE_01211 2.27e-71 ylxM - - S ko:K09787 - ko00000 Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
PODMBIKE_01212 0.0 ffh 3.6.5.4 - U ko:K03106 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko01000,ko02044 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
PODMBIKE_01213 3.93e-59 rpsP - - J ko:K02959 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011,ko03029 Belongs to the bacterial ribosomal protein bS16 family
PODMBIKE_01214 7.02e-119 rimM - - J ko:K02860 - ko00000,ko03009 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
PODMBIKE_01215 1.39e-177 trmD 2.1.1.228 - J ko:K00554 - ko00000,ko01000,ko03016 Belongs to the RNA methyltransferase TrmD family
PODMBIKE_01218 0.0 snf - - KL - - - domain protein
PODMBIKE_01219 4.71e-74 rplS - - J ko:K02884 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
PODMBIKE_01220 0.0 XK27_00340 3.1.3.5 - F ko:K01081 ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110 ko00000,ko00001,ko01000 Belongs to the 5'-nucleotidase family
PODMBIKE_01221 0.0 - - - S - - - TerB-C domain
PODMBIKE_01222 1.89e-316 - - - P - - - P-loop Domain of unknown function (DUF2791)
PODMBIKE_01223 0.0 - - - L ko:K03724 - ko00000,ko01000,ko03400 DEAD DEAH box helicase
PODMBIKE_01224 1.19e-124 - - - - - - - -
PODMBIKE_01225 3.26e-192 glnH - - ET ko:K10039 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter substrate-binding protein
PODMBIKE_01226 4.13e-193 - - - U ko:K05340 - ko00000,ko02000 ribose uptake protein RbsU
PODMBIKE_01227 2.53e-147 lexA 3.4.21.88 - K ko:K01356 - ko00000,ko00002,ko01000,ko01002,ko03400 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
PODMBIKE_01228 1.13e-43 ynzC - - S - - - UPF0291 protein
PODMBIKE_01229 1.55e-42 XK26_06720 - - S ko:K09976 - ko00000 Uncharacterised protein family (UPF0154)
PODMBIKE_01230 0.0 mdlA - - V ko:K06148,ko:K18889 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter
PODMBIKE_01231 0.0 mdlB - - V ko:K06147,ko:K18890 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter
PODMBIKE_01232 1.05e-93 pheB 5.4.99.5 - S ko:K06209 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the UPF0735 family
PODMBIKE_01233 1.6e-270 hom 1.1.1.3 - E ko:K00003 ko00260,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00270,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 homoserine dehydrogenase
PODMBIKE_01234 0.0 - 2.7.2.4 - E ko:K00928 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the aspartokinase family
PODMBIKE_01235 5.05e-233 asd 1.2.1.11 - E ko:K00133 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
PODMBIKE_01236 2.26e-149 plsC 2.3.1.51 - I ko:K00655 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko01004 Acyltransferase
PODMBIKE_01237 3.33e-242 yabB 2.1.1.223 - L ko:K07461,ko:K15460 - ko00000,ko01000,ko03016 Methyltransferase small domain
PODMBIKE_01238 1.49e-176 rpsB - - J ko:K02967 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the universal ribosomal protein uS2 family
PODMBIKE_01239 8.09e-237 tsf - - J ko:K02357 - ko00000,ko03012,ko03029 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
PODMBIKE_01240 5.02e-169 pyrH 2.7.4.22 - F ko:K09903 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko01000 Catalyzes the reversible phosphorylation of UMP to UDP
PODMBIKE_01241 2.75e-118 frr - - J ko:K02838 - ko00000,ko03012 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
PODMBIKE_01242 3.99e-176 uppS 2.5.1.31 - H ko:K00806 ko00900,ko01110,map00900,map01110 ko00000,ko00001,ko01000,ko01006 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
PODMBIKE_01243 1.97e-187 cdsA 2.7.7.41 - S ko:K00981 ko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070 ko00000,ko00001,ko00002,ko01000 Belongs to the CDS family
PODMBIKE_01244 2.38e-291 rseP - - M ko:K11749 ko02024,ko04112,map02024,map04112 ko00000,ko00001,ko01000,ko01002 zinc metalloprotease
PODMBIKE_01245 0.0 proS 6.1.1.15 - J ko:K01881 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
PODMBIKE_01246 0.0 polC 2.7.7.7 - L ko:K03763 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PODMBIKE_01247 1.01e-109 rimP - - J ko:K09748 - ko00000,ko03009 Required for maturation of 30S ribosomal subunits
PODMBIKE_01248 5.54e-264 nusA - - K ko:K02600 - ko00000,ko03009,ko03021 Participates in both transcription termination and antitermination
PODMBIKE_01249 1.03e-57 ylxR - - K ko:K07742 - ko00000 Protein of unknown function (DUF448)
PODMBIKE_01250 2.5e-57 ylxQ - - J - - - ribosomal protein
PODMBIKE_01251 0.0 infB - - J ko:K02519 - ko00000,ko03012,ko03029 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
PODMBIKE_01252 2.57e-78 rbfA - - J ko:K02834 - ko00000,ko03009 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
PODMBIKE_01253 1.6e-214 truB 5.4.99.25 - J ko:K03177,ko:K03483 - ko00000,ko01000,ko03000,ko03016 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
PODMBIKE_01254 6.09e-70 cysE 2.3.1.30 - E ko:K00640 ko00270,ko00920,ko01100,ko01110,ko01120,ko01200,ko01230,ko05111,map00270,map00920,map01100,map01110,map01120,map01200,map01230,map05111 ko00000,ko00001,ko00002,ko01000 Bacterial transferase hexapeptide (six repeats)
PODMBIKE_01255 7.19e-280 mccB 4.4.1.1, 4.4.1.2, 4.4.1.8 - E ko:K01760,ko:K17217 ko00260,ko00270,ko00450,ko00920,ko01100,ko01110,ko01130,ko01230,map00260,map00270,map00450,map00920,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 cystathionine
PODMBIKE_01256 5.16e-218 mccA 2.5.1.134, 2.5.1.47 - E ko:K01738,ko:K17216 ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the cysteine synthase cystathionine beta- synthase family
PODMBIKE_01257 2.49e-114 luxS 4.4.1.21 - H ko:K07173 ko00270,ko01100,ko01230,ko02024,ko02026,ko05111,map00270,map01100,map01230,map02024,map02026,map05111 ko00000,ko00001,ko00002,ko01000 Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
PODMBIKE_01258 0.0 metE 2.1.1.14 - E ko:K00549 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
PODMBIKE_01259 8.59e-34 metF 1.5.1.20 - C ko:K00297 ko00670,ko00720,ko01100,ko01120,ko01200,ko01523,map00670,map00720,map01100,map01120,map01200,map01523 ko00000,ko00001,ko00002,ko01000 Methylenetetrahydrofolate reductase
PODMBIKE_01265 2.82e-279 metK 2.5.1.6 - H ko:K00789 ko00270,ko01100,ko01110,ko01230,map00270,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
PODMBIKE_01266 0.0 bmr3_1 - - EGP ko:K18935 - ko00000,ko02000 Sugar (and other) transporter
PODMBIKE_01267 8.07e-155 yodM 3.6.1.27 - I ko:K19302 ko00550,map00550 ko00000,ko00001,ko01000,ko01011 Acid phosphatase homologues
PODMBIKE_01268 4.33e-58 - - - M - - - Glycosyltransferase, group 2 family protein
PODMBIKE_01269 1.01e-165 - - - L - - - DDE superfamily endonuclease
PODMBIKE_01270 1.18e-45 - - - S - - - Glycosyltransferase like family 2
PODMBIKE_01272 5.61e-72 - - - L ko:K07496 - ko00000 Putative transposase DNA-binding domain
PODMBIKE_01273 9.06e-316 nhaC - - C ko:K03315 - ko00000,ko02000 Na H antiporter NhaC
PODMBIKE_01274 1.3e-205 - - - J - - - Methyltransferase
PODMBIKE_01275 1.13e-71 asnB 6.3.5.4 - E ko:K01953 ko00250,ko01100,ko01110,map00250,map01100,map01110 ko00000,ko00001,ko01000,ko01002 Aluminium induced protein
PODMBIKE_01276 2.11e-231 asnB 6.3.5.4 - E ko:K01953 ko00250,ko01100,ko01110,map00250,map01100,map01110 ko00000,ko00001,ko01000,ko01002 Aluminium induced protein
PODMBIKE_01284 1.02e-71 - 1.1.1.193, 3.5.4.26 - H ko:K11752 ko00740,ko01100,ko01110,ko02024,map00740,map01100,map01110,map02024 ko00000,ko00001,ko00002,ko01000 MafB19-like deaminase
PODMBIKE_01285 6.76e-16 ribE 2.5.1.9 - H ko:K00793 ko00740,ko01100,ko01110,map00740,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Riboflavin synthase
PODMBIKE_01286 9.99e-254 ribBA 3.5.4.25, 4.1.99.12 - H ko:K14652 ko00740,ko00790,ko01100,ko01110,map00740,map00790,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate
PODMBIKE_01287 9.07e-102 ribH 2.5.1.78 - H ko:K00794 ko00740,ko01100,ko01110,map00740,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin
PODMBIKE_01288 8.25e-15 - - - - - - - -
PODMBIKE_01289 5.43e-298 - - - L - - - Transposase
PODMBIKE_01290 6.94e-199 - - - K - - - LysR family
PODMBIKE_01291 9.72e-47 - - - P ko:K03319 - ko00000 Sodium:sulfate symporter transmembrane region
PODMBIKE_01292 5.43e-97 - - - - - - - -
PODMBIKE_01293 9.29e-79 - - - M - - - Glycosyl transferases group 1
PODMBIKE_01294 2.19e-48 - 2.3.1.79 - M ko:K00661 - ko00000,ko01000 Glycosyltransferase Family 4
PODMBIKE_01295 1.63e-222 - - - M - - - Glycosyl transferase 4-like
PODMBIKE_01296 7.56e-157 epsE2 - - M - - - Bacterial sugar transferase
PODMBIKE_01297 1.15e-187 ywqE 3.1.3.48 - GM ko:K01104 - ko00000,ko01000 PHP domain protein
PODMBIKE_01298 6.38e-148 ywqD - - D - - - Capsular exopolysaccharide family
PODMBIKE_01299 1.33e-157 epsB - - M - - - biosynthesis protein
PODMBIKE_01300 7.11e-231 brpA - - K - - - Cell envelope-like function transcriptional attenuator common domain protein
PODMBIKE_01301 6.39e-297 hflX - - S ko:K03665 - ko00000,ko03009 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
PODMBIKE_01302 2.98e-157 - - - M ko:K21471 - ko00000,ko01000,ko01002,ko01011 NlpC P60 family protein
PODMBIKE_01303 1.15e-120 - - - M ko:K21471 - ko00000,ko01000,ko01002,ko01011 NlpC P60 family protein
PODMBIKE_01304 8.38e-49 - - - M ko:K21471 - ko00000,ko01000,ko01002,ko01011 NlpC P60 family protein
PODMBIKE_01305 3.55e-86 - - - M ko:K21471 - ko00000,ko01000,ko01002,ko01011 NlpC P60 family protein
PODMBIKE_01306 2.12e-159 - - - M ko:K21471 - ko00000,ko01000,ko01002,ko01011 NlpC P60 family protein
PODMBIKE_01307 1.75e-105 lytE - - M ko:K21471 - ko00000,ko01000,ko01002,ko01011 NlpC/P60 family
PODMBIKE_01308 6.59e-255 idhA 1.1.1.28 - CH ko:K03778 ko00620,ko01120,map00620,map01120 ko00000,ko00001,ko01000 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PODMBIKE_01309 1.22e-107 lytE - - M ko:K21471 - ko00000,ko01000,ko01002,ko01011 NlpC P60 family
PODMBIKE_01310 6.1e-124 gmk2 2.7.4.8 - F ko:K00942 ko00230,ko01100,map00230,map01100 ko00000,ko00001,ko00002,ko01000 Guanylate kinase homologues.
PODMBIKE_01311 2.89e-64 - - - - - - - -
PODMBIKE_01312 0.0 - - - S - - - O-antigen ligase like membrane protein
PODMBIKE_01313 4.02e-145 - - - - - - - -
PODMBIKE_01314 1.96e-102 - - - - - - - -
PODMBIKE_01315 8.56e-109 - - - S - - - Threonine/Serine exporter, ThrE
PODMBIKE_01316 7.94e-174 - - - S - - - Putative threonine/serine exporter
PODMBIKE_01317 0.0 - - - S - - - ABC transporter, ATP-binding protein
PODMBIKE_01319 1.12e-264 brpA - - K - - - Cell envelope-like function transcriptional attenuator common domain protein
PODMBIKE_01320 0.0 - - - L ko:K07496 - ko00000 Putative transposase DNA-binding domain
PODMBIKE_01321 0.0 pepF - - E ko:K08602 - ko00000,ko01000,ko01002 oligoendopeptidase F
PODMBIKE_01322 5.42e-129 lctO 1.13.12.4 - C ko:K00467,ko:K10530 ko00620,map00620 ko00000,ko00001,ko01000 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases
PODMBIKE_01323 4.15e-73 - - - KT - - - response to antibiotic
PODMBIKE_01324 2.09e-173 znuB - - U ko:K02075,ko:K09816 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC 3 transport family
PODMBIKE_01325 1.2e-155 adcC - - P ko:K02074,ko:K09817,ko:K11710 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ABC transporter
PODMBIKE_01326 1.75e-186 - 3.1.3.102, 3.1.3.104, 3.1.3.23 - G ko:K07757,ko:K20861 ko00740,ko01100,ko01110,map00740,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Sucrose-6F-phosphate phosphohydrolase
PODMBIKE_01327 0.0 fruA 2.7.1.202 - GT ko:K02768,ko:K02769,ko:K02770 ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 Phosphotransferase System
PODMBIKE_01328 1.41e-211 pfkB 2.7.1.56 - H ko:K00882 ko00051,map00051 ko00000,ko00001,ko01000 Belongs to the carbohydrate kinase PfkB family. LacC subfamily
PODMBIKE_01329 3.02e-174 fruR - - K ko:K03436 - ko00000,ko03000 DeoR C terminal sensor domain
PODMBIKE_01330 3.86e-186 racD 5.1.1.13 - M ko:K01779 ko00250,ko01054,map00250,map01054 ko00000,ko00001,ko01000 Belongs to the aspartate glutamate racemases family
PODMBIKE_01331 0.0 murE 6.3.2.13, 6.3.2.7 - M ko:K01928,ko:K05362 ko00300,ko00550,ko01100,map00300,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
PODMBIKE_01332 4.19e-283 - - - T - - - His Kinase A (phosphoacceptor) domain
PODMBIKE_01333 3.03e-159 vanR - - K - - - response regulator
PODMBIKE_01334 0.0 ndvA - - V ko:K06147 - ko00000,ko02000 ABC transporter
PODMBIKE_01335 0.0 - - - V ko:K06147,ko:K06148 - ko00000,ko02000 ABC transporter, ATP-binding protein
PODMBIKE_01336 1.61e-177 - - - S - - - Protein of unknown function (DUF1129)
PODMBIKE_01337 6.88e-257 ychF - - J ko:K06942 - ko00000,ko03009 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
PODMBIKE_01338 1.1e-59 yyzM - - S - - - Bacterial protein of unknown function (DUF951)
PODMBIKE_01339 2.91e-198 spo0J - - K ko:K03497 - ko00000,ko03000,ko03036,ko04812 Belongs to the ParB family
PODMBIKE_01340 2.37e-176 soj - - D ko:K03496 - ko00000,ko03036,ko04812 Sporulation initiation inhibitor
PODMBIKE_01341 8.93e-184 noc - - K ko:K03497 - ko00000,ko03000,ko03036,ko04812 Belongs to the ParB family
PODMBIKE_01342 3.68e-170 rsmG 2.1.1.170 - J ko:K03501 - ko00000,ko01000,ko03009,ko03036 Specifically methylates the N7 position of a guanine in 16S rRNA
PODMBIKE_01343 1.36e-47 - - - L - - - Resolvase, N terminal domain
PODMBIKE_01344 0.0 - - - L - - - Putative transposase DNA-binding domain
PODMBIKE_01345 7.44e-113 cvpA - - S - - - Colicin V production protein
PODMBIKE_01346 4.03e-239 apbE 2.7.1.180 - H ko:K03734 - ko00000,ko01000 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
PODMBIKE_01347 6.12e-184 - 3.1.3.48 - T ko:K01104 - ko00000,ko01000 Tyrosine phosphatase family
PODMBIKE_01348 6.08e-125 azr 1.5.1.36 - S ko:K22394 ko00740,ko01100,map00740,map01100 ko00000,ko00001,ko01000 NADPH-dependent FMN reductase
PODMBIKE_01349 2.92e-126 azo1 1.5.1.36, 1.7.1.6 - S ko:K03206,ko:K19784,ko:K22393 ko00740,ko01100,map00740,map01100 ko00000,ko00001,ko01000 NADPH-dependent FMN reductase
PODMBIKE_01350 4.76e-127 - - - K - - - WHG domain
PODMBIKE_01351 0.0 pepD4 - - E ko:K08659 - ko00000,ko01000,ko01002 Dipeptidase
PODMBIKE_01353 3.98e-151 - - - V ko:K01990 - ko00000,ko00002,ko02000 AAA domain, putative AbiEii toxin, Type IV TA system
PODMBIKE_01354 2.38e-140 - - - - - - - -
PODMBIKE_01356 8.95e-74 glcD 1.1.3.15 - C ko:K00104 ko00630,ko01100,ko01110,ko01120,ko01130,map00630,map01100,map01110,map01120,map01130 ko00000,ko00001,ko01000 FAD linked oxidases, C-terminal domain
PODMBIKE_01357 5.02e-22 glcD 1.1.3.15 - C ko:K00104 ko00630,ko01100,ko01110,ko01120,ko01130,map00630,map01100,map01110,map01120,map01130 ko00000,ko00001,ko01000 FAD linked oxidases, C-terminal domain
PODMBIKE_01358 7.19e-180 XK27_08125 - - S ko:K09861 - ko00000 Belongs to the UPF0246 family
PODMBIKE_01359 4.89e-152 - - - - - - - -
PODMBIKE_01360 7.32e-290 - - - S - - - Putative peptidoglycan binding domain
PODMBIKE_01362 2.18e-40 drgA - - C - - - coenzyme F420-1:gamma-L-glutamate ligase activity
PODMBIKE_01363 0.0 pepN 3.4.11.2 - E ko:K01256 ko00480,ko01100,map00480,map01100 ko00000,ko00001,ko01000,ko01002 aminopeptidase
PODMBIKE_01364 3.04e-50 lysM - - M - - - LysM domain
PODMBIKE_01365 8.61e-223 citI - - K - - - Putative sugar-binding domain
PODMBIKE_01366 0.0 - - - M ko:K08659 - ko00000,ko01000,ko01002 Peptidase family C69
PODMBIKE_01367 0.0 citP - - P ko:K03319 - ko00000 Sodium:sulfate symporter transmembrane region
PODMBIKE_01368 0.0 fumC 4.2.1.2 - C ko:K01679 ko00020,ko00620,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko04934,ko05200,ko05211,map00020,map00620,map00720,map01100,map01110,map01120,map01130,map01200,map04934,map05200,map05211 ko00000,ko00001,ko00002,ko01000 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
PODMBIKE_01370 1.73e-196 - - - - - - - -
PODMBIKE_01371 4.55e-56 - - - V - - - RRXRR protein
PODMBIKE_01372 2.88e-47 - - - - - - - -
PODMBIKE_01373 2.18e-117 ymdB - - S - - - Macro domain protein
PODMBIKE_01374 1.36e-187 - 3.1.3.48 - T ko:K01104 - ko00000,ko01000 Tyrosine phosphatase family
PODMBIKE_01375 0.0 - - - V ko:K06148 - ko00000,ko02000 ABC-type multidrug transport system, ATPase and permease components
PODMBIKE_01376 0.0 - - - KLT - - - serine threonine protein kinase
PODMBIKE_01377 2.82e-185 - 3.1.3.48 - T ko:K01104 - ko00000,ko01000 Tyrosine phosphatase family
PODMBIKE_01378 9.45e-277 glpK 2.7.1.30 - F ko:K00864 ko00561,ko01100,ko03320,ko04626,map00561,map01100,map03320,map04626 ko00000,ko00001,ko01000,ko04147 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
PODMBIKE_01379 3.87e-168 cobQ - - S ko:K07009 - ko00000 glutamine amidotransferase
PODMBIKE_01380 1.51e-49 - - - - - - - -
PODMBIKE_01381 0.0 clpL - - O ko:K04086 - ko00000,ko03110 C-terminal, D2-small domain, of ClpB protein
PODMBIKE_01382 6.66e-166 - - - T - - - diguanylate cyclase
PODMBIKE_01383 9.01e-28 brnQ - - U ko:K03311 - ko00000 Component of the transport system for branched-chain amino acids
PODMBIKE_01384 2.6e-38 brnQ - - U ko:K03311 - ko00000 Component of the transport system for branched-chain amino acids
PODMBIKE_01385 0.0 carB 6.3.5.5 - F ko:K01955 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Carbamoyl-phosphate synthase
PODMBIKE_01386 4.22e-269 carA 6.3.5.5 - F ko:K01956 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Carbamoyl-phosphate synthetase glutamine chain
PODMBIKE_01387 4.3e-315 pyrC 3.5.2.3 - F ko:K01465 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
PODMBIKE_01388 8.08e-234 pyrB 2.1.3.2 - F ko:K00609 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the ATCase OTCase family
PODMBIKE_01389 2.49e-123 pyrR 2.4.2.9 - F ko:K02825 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko01000,ko03000 Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
PODMBIKE_01390 9.2e-214 pyrD 1.3.1.14, 1.3.98.1 - F ko:K00226,ko:K17828 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
PODMBIKE_01391 1.56e-32 - - - L - - - Transposase
PODMBIKE_01392 7.26e-39 tnp2 - - L - - - PFAM Transposase, IS204 IS1001 IS1096 IS1165
PODMBIKE_01393 4.51e-65 pinR1 - - L - - - Helix-turn-helix domain of Hin and related proteins, a family of DNA-binding domains unique to bacteria and represented by the Hin protein of Salmonella. The basic HTH domain is a simple fold comprised of three core helices that form a right-handed
PODMBIKE_01394 9.03e-203 yicL - - EG - - - EamA-like transporter family
PODMBIKE_01395 3.99e-179 puuD - - S ko:K07010 - ko00000,ko01002 peptidase C26
PODMBIKE_01396 1.1e-190 - - - S - - - Sucrose-6F-phosphate phosphohydrolase
PODMBIKE_01397 9.6e-213 - - - S - - - Alpha/beta hydrolase of unknown function (DUF915)
PODMBIKE_01398 1.48e-307 pts13C - - G ko:K02761 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko02000 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PODMBIKE_01399 9.15e-78 B4168_4126 - - L ko:K07493 - ko00000 Transposase
PODMBIKE_01410 1.18e-175 metA 2.3.1.46 - E ko:K00651 ko00270,ko00920,ko01100,ko01110,ko01230,map00270,map00920,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Transfers an acetyl group from acetyl-CoA to
PODMBIKE_01417 2.5e-51 - - - L - - - DDE superfamily endonuclease
PODMBIKE_01418 1.18e-128 - - - L - - - Belongs to the 'phage' integrase family
PODMBIKE_01419 6.61e-228 ribF 2.7.1.26, 2.7.7.2 - H ko:K11753 ko00740,ko01100,ko01110,map00740,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Belongs to the ribF family
PODMBIKE_01420 1.86e-245 hrcA - - K ko:K03705 - ko00000,ko03000 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
PODMBIKE_01421 1.04e-109 grpE - - O ko:K03687 - ko00000,ko03029,ko03110 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
PODMBIKE_01422 0.0 dnaK - - O ko:K04043 ko03018,ko04212,ko05152,map03018,map04212,map05152 ko00000,ko00001,ko03019,ko03029,ko03110,ko04147 Heat shock 70 kDa protein
PODMBIKE_01423 5.57e-237 dnaJ - - O ko:K03686 - ko00000,ko03029,ko03110 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
PODMBIKE_01424 0.0 lepA - - M ko:K03596 ko05134,map05134 ko00000,ko00001 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
PODMBIKE_01425 7.92e-158 srtA 3.4.22.70 - M ko:K07284 - ko00000,ko01000,ko01002,ko01011 sortase family
PODMBIKE_01426 0.0 recJ - - L ko:K07462 ko03410,ko03430,ko03440,map03410,map03430,map03440 ko00000,ko00001,ko01000,ko03400 Single-stranded-DNA-specific exonuclease RecJ
PODMBIKE_01427 2.82e-122 apt 2.4.2.7 - F ko:K00759 ko00230,ko01100,map00230,map01100 ko00000,ko00001,ko01000,ko04147 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
PODMBIKE_01428 5.47e-66 - - - K - - - DNA-binding transcription factor activity
PODMBIKE_01429 7.41e-198 - - - P ko:K16264 - ko00000,ko02000 cation diffusion facilitator family transporter
PODMBIKE_01430 1.39e-257 ilvE 2.6.1.42 - E ko:K00826 ko00270,ko00280,ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00270,map00280,map00290,map00770,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Branched-chain amino acid aminotransferase
PODMBIKE_01431 8.77e-245 - - - S - - - AI-2E family transporter
PODMBIKE_01432 1.19e-19 brpA - - K - - - Cell envelope-like function transcriptional attenuator common domain protein
PODMBIKE_01433 2.47e-88 brpA - - K - - - Cell envelope-like function transcriptional attenuator common domain protein
PODMBIKE_01434 1.09e-36 brpA - - K - - - Cell envelope-like function transcriptional attenuator common domain protein
PODMBIKE_01435 0.0 - - - P - - - Cation transporter/ATPase, N-terminus
PODMBIKE_01436 5.95e-203 lysR5 - - K - - - LysR substrate binding domain
PODMBIKE_01437 0.0 glnPH2 - - P ko:K02029,ko:K02030 - ko00000,ko00002,ko02000 ABC transporter permease
PODMBIKE_01438 1.97e-173 glnQ 3.6.3.21 - E ko:K02028 - ko00000,ko00002,ko01000,ko02000 ABC transporter, ATP-binding protein
PODMBIKE_01439 5.93e-135 - - - S - - - Protein of unknown function (DUF4230)
PODMBIKE_01440 3.07e-255 - - - S - - - Bacterial protein of unknown function (DUF898)
PODMBIKE_01441 9.52e-72 - - - S - - - Protein of unknown function (DUF2752)
PODMBIKE_01442 9.3e-310 eno 4.2.1.11 - G ko:K01689 ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066 ko00000,ko00001,ko00002,ko01000,ko03019,ko04147 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
PODMBIKE_01443 1.06e-193 - - - S - - - Uncharacterised protein, DegV family COG1307
PODMBIKE_01444 1.52e-129 - - - I - - - PAP2 superfamily
PODMBIKE_01445 6.72e-204 - - - - - - - -
PODMBIKE_01446 1.79e-212 - - - K - - - LysR substrate binding domain
PODMBIKE_01447 0.0 yfiB1 - - V ko:K06147,ko:K06148 - ko00000,ko02000 ABC transporter, ATP-binding protein
PODMBIKE_01448 0.0 - - - V ko:K06147 - ko00000,ko02000 ABC transporter
PODMBIKE_01452 5.15e-216 XK27_10395 - - S - - - Uncharacterised 5xTM membrane BCR, YitT family COG1284
PODMBIKE_01453 1.02e-280 cca 2.7.7.72 - J ko:K00974 ko03013,map03013 ko00000,ko00001,ko01000,ko03016 Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
PODMBIKE_01454 5.65e-151 hlyIII - - S ko:K11068 - ko00000,ko02042 protein, hemolysin III
PODMBIKE_01455 3.72e-200 degV3 - - S - - - Uncharacterised protein, DegV family COG1307
PODMBIKE_01456 9.85e-49 yozE - - S - - - Belongs to the UPF0346 family
PODMBIKE_01457 4.39e-210 rbgA - - S ko:K14540 - ko00000,ko03009 Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
PODMBIKE_01458 3.8e-176 rnhB 3.1.26.4 - L ko:K03470 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PODMBIKE_01459 6.89e-195 dprA - - LU ko:K04096 - ko00000 DNA protecting protein DprA
PODMBIKE_01460 0.0 topA 5.99.1.2 - L ko:K03168 - ko00000,ko01000,ko03032,ko03400 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
PODMBIKE_01461 1.61e-315 trmFO 2.1.1.74 - J ko:K04094 - ko00000,ko01000,ko03016,ko03036 Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
PODMBIKE_01462 2.35e-210 xerC - - D ko:K03733,ko:K04763 - ko00000,ko03036 Phage integrase, N-terminal SAM-like domain
PODMBIKE_01463 7.14e-117 hslV 3.4.25.2 - O ko:K01419 - ko00000,ko01000,ko01002 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
PODMBIKE_01464 9.09e-314 hslU - - O ko:K03667 - ko00000,ko03110 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
PODMBIKE_01465 1.13e-223 lacX 5.1.3.3 - G ko:K01785 ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130 ko00000,ko00001,ko00002,ko01000 Aldose 1-epimerase
PODMBIKE_01468 0.0 lysA 4.1.1.20 - E ko:K01586 ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
PODMBIKE_01469 9.94e-287 aspC 2.6.1.57 - E ko:K00832,ko:K00841 ko00270,ko00300,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01230,map00270,map00300,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Aminotransferase
PODMBIKE_01470 1.46e-10 secY2 - - U ko:K03076 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 SecY translocase
PODMBIKE_01472 1.41e-70 - - - L - - - An automated process has identified a potential problem with this gene model
PODMBIKE_01473 1.47e-208 yitT - - S - - - Uncharacterised 5xTM membrane BCR, YitT family COG1284
PODMBIKE_01475 1.14e-196 yqfL 2.7.11.33, 2.7.4.28 - F ko:K09773 - ko00000,ko01000 Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
PODMBIKE_01476 4.83e-30 rpsU - - J ko:K02970 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bS21 family
PODMBIKE_01477 5.56e-217 phoH - - T ko:K06217 - ko00000 phosphate starvation-inducible protein PhoH
PODMBIKE_01478 5.94e-128 ybeY - - S ko:K07042 - ko00000,ko03009 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
PODMBIKE_01479 4.68e-99 cdd 3.5.4.5 - F ko:K01489 ko00240,ko00983,ko01100,map00240,map00983,map01100 ko00000,ko00001,ko01000 This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis
PODMBIKE_01480 9.98e-215 era - - S ko:K03595 - ko00000,ko03009,ko03029 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
PODMBIKE_01481 4.29e-174 recO - - L ko:K03584 ko03440,map03440 ko00000,ko00001,ko03400 Involved in DNA repair and RecF pathway recombination
PODMBIKE_01482 2.21e-228 glyQ 6.1.1.14 - J ko:K01878 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 glycyl-tRNA synthetase alpha subunit
PODMBIKE_01483 0.0 glyS 6.1.1.14 - J ko:K01879 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Glycyl-tRNA synthetase beta subunit
PODMBIKE_01484 0.0 dnaG - - L ko:K02316 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
PODMBIKE_01485 4.28e-254 sigA - - K ko:K03086 - ko00000,ko03021 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
PODMBIKE_01486 1.38e-255 sigA - - K ko:K03086 - ko00000,ko03021 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
PODMBIKE_01487 1.1e-259 - - - K ko:K03086 - ko00000,ko03021 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
PODMBIKE_01488 2.37e-50 pbg4 3.2.1.86 GT1 G ko:K01223 ko00010,ko00500,map00010,map00500 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 1 family
PODMBIKE_01489 1.18e-55 celA 3.2.1.86 GT1 G ko:K01223 ko00010,ko00500,map00010,map00500 ko00000,ko00001,ko01000 beta-glucosidase activity
PODMBIKE_01490 0.0 copB 3.6.3.3, 3.6.3.4, 3.6.3.5, 3.6.3.54 - P ko:K01533,ko:K01534,ko:K17686 ko01524,ko04016,map01524,map04016 ko00000,ko00001,ko01000 P-type ATPase
PODMBIKE_01491 1e-42 mdt(A) - - EGP ko:K08217 - br01600,ko00000,ko01504,ko02000 Transmembrane secretion effector
PODMBIKE_01492 1.57e-253 - 2.1.1.72 - V ko:K03427 - ko00000,ko01000,ko02048 type I restriction-modification system
PODMBIKE_01493 8.16e-36 - - - - - - - -
PODMBIKE_01494 1.83e-250 - - - S - - - Protein of unknown function DUF262
PODMBIKE_01495 6.99e-50 - - - N ko:K09384 - ko00000 Uncharacterized conserved protein (DUF2075)
PODMBIKE_01496 7.93e-252 - - - N ko:K09384 - ko00000 Uncharacterized conserved protein (DUF2075)
PODMBIKE_01497 3.33e-82 B4168_4126 - - L ko:K07493 - ko00000 Transposase
PODMBIKE_01498 4.05e-39 B4168_4126 - - L ko:K07493 - ko00000 Transposase
PODMBIKE_01499 8.64e-130 - - - S - - - AAA domain
PODMBIKE_01500 1.89e-183 - - - V ko:K07454 - ko00000 HNH endonuclease
PODMBIKE_01502 2.95e-61 vsr - - L ko:K07458 - ko00000,ko01000,ko03400 DNA mismatch endonuclease Vsr
PODMBIKE_01503 0.0 - - - V - - - Z1 domain
PODMBIKE_01504 1.88e-296 - - - L - - - NgoFVII restriction endonuclease
PODMBIKE_01505 4.65e-278 dcm 2.1.1.37 - H ko:K00558 ko00270,ko01100,ko05206,map00270,map01100,map05206 ko00000,ko00001,ko00002,ko01000,ko02048,ko03032,ko03036 C-5 cytosine-specific DNA methylase
PODMBIKE_01508 1.81e-54 - - - K - - - Helix-turn-helix domain
PODMBIKE_01509 7.99e-78 - 1.3.5.4 - C ko:K00244 ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020 ko00000,ko00001,ko00002,ko01000 domain protein
PODMBIKE_01510 1.21e-225 - 1.3.5.4 - C ko:K00244 ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020 ko00000,ko00001,ko00002,ko01000 FAD binding domain
PODMBIKE_01511 2.19e-38 adaA1 2.1.1.63, 3.2.2.21 - K ko:K10778,ko:K13529,ko:K13530,ko:K15051 ko03410,map03410 ko00000,ko00001,ko01000,ko03000,ko03400 sequence-specific DNA binding
PODMBIKE_01512 1e-100 ogt 2.1.1.63 - L ko:K00567,ko:K13531 - ko00000,ko01000,ko03400 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
PODMBIKE_01513 4.59e-34 ogt 2.1.1.63 - L ko:K00567,ko:K13531 - ko00000,ko01000,ko03400 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
PODMBIKE_01514 1.49e-187 - - - S - - - Peptidase family M23
PODMBIKE_01515 2.99e-103 - 3.6.1.55 - F ko:K03574 - ko00000,ko01000,ko03400 NUDIX domain
PODMBIKE_01516 1.38e-156 trmK 2.1.1.217 - S ko:K06967 - ko00000,ko01000,ko03016 SAM-dependent methyltransferase
PODMBIKE_01517 5.49e-194 yqfO - - S - - - Belongs to the GTP cyclohydrolase I type 2 NIF3 family
PODMBIKE_01518 1.36e-309 pepT 3.4.11.4 - E ko:K01258 - ko00000,ko01000,ko01002 Cleaves the N-terminal amino acid of tripeptides
PODMBIKE_01519 3.04e-32 - - - - - - - -
PODMBIKE_01520 1.13e-132 lepB 3.4.21.89 - U ko:K03100 ko02024,ko03060,map02024,map03060 ko00000,ko00001,ko01000,ko01002 Belongs to the peptidase S26 family
PODMBIKE_01521 4.73e-206 - - - L - - - Phage integrase, N-terminal SAM-like domain
PODMBIKE_01522 5.33e-64 - - - S - - - Alpha beta hydrolase
PODMBIKE_01523 1.1e-97 thgA3 2.3.1.79 - S ko:K00661 - ko00000,ko01000 Maltose acetyltransferase
PODMBIKE_01524 4.84e-120 asnS 6.1.1.22 - J ko:K01893 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Asparaginyl-tRNA synthetase
PODMBIKE_01529 3.16e-05 adhE 1.1.1.1, 1.2.1.10 - C ko:K04072 ko00010,ko00071,ko00350,ko00620,ko00625,ko00626,ko00650,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00620,map00625,map00626,map00650,map01100,map01110,map01120,map01130,map01220 ko00000,ko00001,ko01000 belongs to the iron- containing alcohol dehydrogenase family
PODMBIKE_01530 1.2e-190 - 1.1.1.1, 1.2.1.10, 1.2.1.87 - C ko:K04072,ko:K13922 ko00010,ko00071,ko00350,ko00620,ko00625,ko00626,ko00640,ko00650,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00620,map00625,map00626,map00640,map00650,map01100,map01110,map01120,map01130,map01220 ko00000,ko00001,ko01000 Aldehyde dehydrogenase family
PODMBIKE_01531 9.05e-62 adhE 1.1.1.1, 1.2.1.10 - C ko:K04072 ko00010,ko00071,ko00350,ko00620,ko00625,ko00626,ko00650,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00620,map00625,map00626,map00650,map01100,map01110,map01120,map01130,map01220 ko00000,ko00001,ko01000 belongs to the iron- containing alcohol dehydrogenase family
PODMBIKE_01532 3.27e-184 - - - G - - - polysaccharide deacetylase
PODMBIKE_01536 1.69e-65 - - - S - - - Domain of Unknown Function with PDB structure (DUF3862)
PODMBIKE_01538 8.75e-160 birA 6.3.4.15 - H ko:K03524 ko00780,ko01100,map00780,map01100 ko00000,ko00001,ko01000,ko03000 Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
PODMBIKE_01539 4.27e-162 fabI 1.3.1.10, 1.3.1.9 - I ko:K00208 ko00061,ko00333,ko00780,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01100,map01130,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 Enoyl- acyl-carrier-protein reductase NADH
PODMBIKE_01540 7.4e-178 accA 2.1.3.15, 6.4.1.2 - I ko:K01962 ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212 ko00000,ko00001,ko00002,ko01000 alpha subunit
PODMBIKE_01541 2.63e-205 accD 2.1.3.15, 6.4.1.2 - I ko:K01963 ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212 ko00000,ko00001,ko00002,ko01000 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
PODMBIKE_01542 0.0 accC 6.3.4.14, 6.4.1.2 - I ko:K01961 ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212 ko00000,ko00001,ko00002,ko01000 Acetyl-CoA carboxylase biotin carboxylase subunit
PODMBIKE_01543 6.26e-101 fabZ 4.2.1.59 - I ko:K02372 ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
PODMBIKE_01544 3.61e-95 accB - - I ko:K02160 ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212 ko00000,ko00001,ko00002 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
PODMBIKE_01545 1.87e-288 fabF 2.3.1.179 - I ko:K09458 ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
PODMBIKE_01546 1.53e-158 fabG 1.1.1.100 - IQ ko:K00059 ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 reductase
PODMBIKE_01547 1.56e-229 fabD 2.3.1.39 - I ko:K00645,ko:K15327,ko:K15329 ko00061,ko00333,ko01100,ko01130,ko01212,map00061,map00333,map01100,map01130,map01212 ko00000,ko00001,ko00002,ko01000,ko01004,ko01008 Malonyl CoA-acyl carrier protein transacylase
PODMBIKE_01548 1.31e-44 acpP - - IQ ko:K02078 - ko00000,ko00001 Carrier of the growing fatty acid chain in fatty acid biosynthesis
PODMBIKE_01549 4.78e-222 fabH 2.3.1.180 - I ko:K00648 ko00061,ko01100,ko01212,map00061,map01100,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
PODMBIKE_01550 1.05e-235 ydbI - - K - - - AI-2E family transporter
PODMBIKE_01551 0.0 - - - S - - - Predicted membrane protein (DUF2207)
PODMBIKE_01552 3.93e-27 - - - - - - - -
PODMBIKE_01553 0.0 aspS 6.1.1.12 - J ko:K01876 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
PODMBIKE_01554 5e-311 hisS 6.1.1.21 - J ko:K01892 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 histidyl-tRNA synthetase
PODMBIKE_01555 2.42e-97 dtd - - J ko:K07560 - ko00000,ko01000,ko03016 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
PODMBIKE_01556 0.0 relA 2.7.6.5 - KT ko:K00951 ko00230,map00230 ko00000,ko00001,ko01000 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
PODMBIKE_01557 2.28e-222 prmA - - J ko:K02687 - ko00000,ko01000,ko03009 Ribosomal protein L11 methyltransferase
PODMBIKE_01558 1.16e-115 ybaK - - S ko:K03976 - ko00000,ko01000,ko03016 Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
PODMBIKE_01559 1.89e-309 - - - S - - - Putative threonine/serine exporter
PODMBIKE_01560 6.16e-282 mvaS 2.3.3.10 - I ko:K01641 ko00072,ko00280,ko00650,ko00900,ko01100,ko01110,ko01130,map00072,map00280,map00650,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Hydroxymethylglutaryl-CoA synthase
PODMBIKE_01561 1.2e-277 mvaA 1.1.1.88, 2.3.1.9 - C ko:K00054,ko:K00626 ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the HMG-CoA reductase family
PODMBIKE_01562 1.12e-246 atoB 1.1.1.88, 2.3.1.9 - I ko:K00054,ko:K00626 ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the thiolase family
PODMBIKE_01563 1.69e-64 - - - S - - - CRISPR-associated protein (Cas_Csn2)
PODMBIKE_01564 2.7e-51 cas2 - - L ko:K09951 - ko00000,ko02048 CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
PODMBIKE_01565 3.36e-166 cas1 - - L ko:K15342 - ko00000,ko02048,ko03400 CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
PODMBIKE_01566 0.0 cas9 - - L ko:K09952 - ko00000,ko01000,ko02048 CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
PODMBIKE_01567 3.26e-22 cas9 - - L ko:K09952 - ko00000,ko01000,ko02048 CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
PODMBIKE_01568 5.62e-292 sptS - - T - - - Histidine kinase
PODMBIKE_01569 1.33e-150 dltr - - K - - - response regulator
PODMBIKE_01570 1.85e-148 - - - T - - - Region found in RelA / SpoT proteins
PODMBIKE_01571 2.46e-13 - 1.3.5.4 - C ko:K00244 ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020 ko00000,ko00001,ko00002,ko01000 FAD binding domain
PODMBIKE_01573 3.1e-26 - - - - - - - -
PODMBIKE_01575 2.11e-229 argH 4.3.2.1 - E ko:K01755 ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,map00220,map00250,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000,ko04147 argininosuccinate lyase
PODMBIKE_01577 5.36e-93 - - - - - - - -
PODMBIKE_01578 0.0 - - - I - - - Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PODMBIKE_01580 2.61e-35 - - - - - - - -
PODMBIKE_01581 2.13e-149 - - - K ko:K13928 - ko00000,ko03000 DNA-binding transcription factor activity
PODMBIKE_01582 1.77e-11 - - - K - - - Transcriptional regulator, LysR family
PODMBIKE_01583 8.59e-221 - - - K - - - LysR substrate binding domain
PODMBIKE_01584 0.0 yfhO - - S - - - Bacterial membrane protein YfhO
PODMBIKE_01585 1.68e-292 XK27_05225 - - S - - - Tetratricopeptide repeat protein
PODMBIKE_01586 5.57e-55 hup - - L ko:K03530 - ko00000,ko03032,ko03036,ko03400 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
PODMBIKE_01587 2.29e-315 der - - S ko:K03977 - ko00000,ko03009 GTPase that plays an essential role in the late steps of ribosome biogenesis
PODMBIKE_01588 2.15e-280 rpsA - - J ko:K02945 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal protein S1
PODMBIKE_01589 1.22e-139 cmk 2.7.4.25 - F ko:K00945 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the cytidylate kinase family. Type 1 subfamily
PODMBIKE_01590 5.23e-06 mltD - - M ko:K08307 - ko00000,ko01000,ko01011 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains)
PODMBIKE_01591 1.16e-150 ribU - - U - - - Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
PODMBIKE_01592 4.13e-167 rluB 5.4.99.22 - J ko:K06178 - ko00000,ko01000,ko03009 Belongs to the pseudouridine synthase RsuA family
PODMBIKE_01593 1.52e-136 scpB - - D ko:K06024 - ko00000,ko03036 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
PODMBIKE_01594 2.77e-165 scpA - - D ko:K05896 - ko00000,ko03036 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
PODMBIKE_01595 2.22e-82 ribT - - K ko:K02859 - ko00000 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PODMBIKE_01596 1.26e-211 xerD - - D ko:K04763 - ko00000,ko03036 recombinase XerD
PODMBIKE_01597 4.38e-209 yitL - - S ko:K00243 - ko00000 S1 domain
PODMBIKE_01598 2.13e-82 - - - I - - - Acyltransferase family
PODMBIKE_01600 2.01e-51 ssuB - - P ko:K02049,ko:K15555 ko00920,ko02010,map00920,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 anion transmembrane transporter activity
PODMBIKE_01601 0.0 pyk 2.7.1.40 - G ko:K00873 ko00010,ko00230,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko04930,ko05165,ko05203,ko05230,map00010,map00230,map00620,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map04930,map05165,map05203,map05230 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Belongs to the pyruvate kinase family
PODMBIKE_01602 3.98e-230 pfkA 2.7.1.11 - F ko:K00850 ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04152,ko05230,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04152,map05230 ko00000,ko00001,ko00002,ko01000,ko01009,ko03019 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
PODMBIKE_01603 0.0 dnaE 2.7.7.7 - L ko:K02337 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase
PODMBIKE_01604 2.87e-39 - - - S - - - Protein of unknown function (DUF2929)
PODMBIKE_01605 5.15e-79 proB 2.7.2.11 - F ko:K00931 ko00330,ko00332,ko01100,ko01130,ko01230,map00330,map00332,map01100,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
PODMBIKE_01606 1.63e-73 - - - K ko:K03492 - ko00000,ko03000 UbiC transcription regulator-associated domain protein
PODMBIKE_01607 1.01e-19 - - - K ko:K03492 - ko00000,ko03000 UTRA
PODMBIKE_01608 1.37e-128 ywlG - - S - - - Belongs to the UPF0340 family
PODMBIKE_01610 5.63e-45 - - - - - - - -
PODMBIKE_01611 0.0 - - - L - - - SNF2 family N-terminal domain
PODMBIKE_01612 0.0 yfkN 3.1.3.6, 3.1.4.16 - F ko:K01119 ko00230,ko00240,map00230,map00240 ko00000,ko00001,ko01000 Belongs to the 5'-nucleotidase family
PODMBIKE_01613 3.88e-38 rpmF - - J ko:K02911 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011,ko03029 Belongs to the bacterial ribosomal protein bL32 family
PODMBIKE_01614 7.34e-178 - - - S ko:K07124 - ko00000 Belongs to the short-chain dehydrogenases reductases (SDR) family
PODMBIKE_01615 4.62e-224 rnz 3.1.26.11 - J ko:K00784 ko03013,map03013 ko00000,ko00001,ko01000,ko03016 Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
PODMBIKE_01616 0.0 oatA - - I - - - Acyltransferase
PODMBIKE_01617 6.47e-298 obg - - S ko:K03979 - ko00000,ko01000,ko03009 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
PODMBIKE_01618 0.0 uvrC - - L ko:K03703 ko03420,map03420 ko00000,ko00001,ko03400 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
PODMBIKE_01619 6.15e-235 iunH 3.2.2.1 - F ko:K01239 ko00230,ko00760,ko01100,map00230,map00760,map01100 ko00000,ko00001,ko01000 inosine-uridine preferring nucleoside hydrolase
PODMBIKE_01620 0.0 recQ 3.6.4.12 - L ko:K03654 ko03018,map03018 ko00000,ko00001,ko01000,ko03400 ATP-dependent DNA helicase RecQ
PODMBIKE_01621 1.38e-224 gyaR 1.1.1.215, 1.1.1.26, 1.1.1.79, 1.1.1.81 - CH ko:K00015,ko:K00090 ko00030,ko00260,ko00620,ko00630,ko01100,ko01110,ko01120,map00030,map00260,map00620,map00630,map01100,map01110,map01120 ko00000,ko00001,ko01000 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PODMBIKE_01622 2.38e-137 - - - S ko:K07045 - ko00000 Amidohydrolase
PODMBIKE_01624 2.34e-283 coaBC 4.1.1.36, 6.3.2.5 - H ko:K01598,ko:K13038 ko00770,ko01100,map00770,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
PODMBIKE_01625 6.58e-101 argR - - K ko:K03402 - ko00000,ko03000 Regulates arginine biosynthesis genes
PODMBIKE_01626 0.0 argS 6.1.1.19 - J ko:K01887 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Arginyl-tRNA synthetase
PODMBIKE_01627 3.61e-214 yvbU - - K - - - LysR substrate binding domain
PODMBIKE_01628 9.83e-290 - - - EK - - - Aminotransferase, class I
PODMBIKE_01629 9.65e-91 - - - E - - - Methionine synthase
PODMBIKE_01630 1.41e-33 - - - L - - - DDE superfamily endonuclease
PODMBIKE_01632 5.04e-34 - - - L - - - DDE superfamily endonuclease
PODMBIKE_01634 3.58e-148 - - - K - - - Bacterial regulatory proteins, tetR family
PODMBIKE_01635 0.0 yhcA - - V ko:K02003,ko:K02004 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
PODMBIKE_01636 1.01e-86 - - - S - - - Iron-sulphur cluster biosynthesis
PODMBIKE_01638 5.44e-315 dltD - - M ko:K03740 ko01503,ko02020,ko05150,map01503,map02020,map05150 ko00000,ko00001,ko00002,ko01504 Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
PODMBIKE_01639 1.12e-49 dltC 6.1.1.13 - J ko:K14188 ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150 ko00000,ko00001,ko00002,ko01000,ko01504 Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PODMBIKE_01640 1.36e-308 dltB - - M ko:K03739 ko01503,ko02020,ko05150,map01503,map02020,map05150 ko00000,ko00001,ko00002,ko01504 MBOAT, membrane-bound O-acyltransferase family
PODMBIKE_01641 0.0 dltA 6.1.1.13 - H ko:K03367 ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150 ko00000,ko00001,ko00002,ko01000,ko01504 Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PODMBIKE_01642 0.000111 - - - S - - - D-Ala-teichoic acid biosynthesis protein
PODMBIKE_01643 8.99e-61 - - - - - - - -
PODMBIKE_01644 1.86e-286 - - - S - - - Membrane
PODMBIKE_01645 2.97e-110 ykuL - - S - - - (CBS) domain
PODMBIKE_01646 0.0 cadA - - P - - - P-type ATPase
PODMBIKE_01647 4.84e-258 napA - - P - - - Sodium/hydrogen exchanger family
PODMBIKE_01648 7.53e-158 - - - S ko:K07052 - ko00000 CAAX protease self-immunity
PODMBIKE_01649 8.03e-256 - - - S - - - DUF218 domain
PODMBIKE_01650 3.91e-248 tcsA - - S ko:K02058,ko:K07335 - ko00000,ko00002,ko02000 ABC transporter substrate-binding protein PnrA-like
PODMBIKE_01652 8.47e-87 - - - S - - - Psort location Cytoplasmic, score
PODMBIKE_01653 4.02e-239 pkn2 - - KLT - - - Protein tyrosine kinase
PODMBIKE_01654 5.18e-95 - - - S - - - Domain of unknown function (DUF4352)
PODMBIKE_01655 2.28e-250 tcsA - - S ko:K02058,ko:K07335 - ko00000,ko00002,ko02000 ABC transporter substrate-binding protein PnrA-like
PODMBIKE_01656 1.82e-254 tcsA - - S ko:K02058,ko:K07335 - ko00000,ko00002,ko02000 ABC transporter substrate-binding protein PnrA-like
PODMBIKE_01657 0.0 mglA 3.6.3.17 - S ko:K02056,ko:K06400 - ko00000,ko00002,ko01000,ko02000 ABC transporter
PODMBIKE_01658 1.07e-262 mglC - - S ko:K02057 - ko00000,ko00002,ko02000 Belongs to the binding-protein-dependent transport system permease family
PODMBIKE_01659 2.98e-220 yufQ - - S ko:K02057 - ko00000,ko00002,ko02000 Belongs to the binding-protein-dependent transport system permease family
PODMBIKE_01660 1.51e-26 - - - EGP - - - Major Facilitator
PODMBIKE_01661 1.78e-202 - - - S - - - Aldo/keto reductase family
PODMBIKE_01662 6.54e-157 nagB 3.5.99.6 - G ko:K02564 ko00520,ko01100,map00520,map01100 ko00000,ko00001,ko01000 Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
PODMBIKE_01664 1.69e-19 - - - L ko:K07497 - ko00000 PFAM Integrase catalytic region
PODMBIKE_01666 1.93e-209 ybfG - - M - - - peptidoglycan-binding domain-containing protein
PODMBIKE_01667 1.09e-51 - - - - - - - -
PODMBIKE_01668 6.66e-159 dak 2.7.1.76 - F ko:K10353 ko00230,ko01100,map00230,map01100 ko00000,ko00001,ko01000 deoxynucleoside kinase
PODMBIKE_01669 8.05e-166 dgk2 2.7.1.76 - F ko:K10353 ko00230,ko01100,map00230,map01100 ko00000,ko00001,ko01000 deoxynucleoside kinase
PODMBIKE_01670 0.0 glnP - - P ko:K02029,ko:K02030,ko:K10036 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter
PODMBIKE_01671 8.7e-178 glnQ 3.6.3.21 - E ko:K02028 - ko00000,ko00002,ko01000,ko02000 ABC transporter, ATP-binding protein
PODMBIKE_01672 1.89e-294 pbuG - - S ko:K06901 - ko00000,ko02000 permease
PODMBIKE_01673 0.0 eriC - - P ko:K03281 - ko00000 chloride
PODMBIKE_01674 1.97e-107 XK27_08850 - - S ko:K19055 - ko00000,ko01000,ko03016 Aminoacyl-tRNA editing domain
PODMBIKE_01675 2.64e-135 - - - - - - - -
PODMBIKE_01676 0.0 gnd 1.1.1.343, 1.1.1.44 - H ko:K00033 ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
PODMBIKE_01677 0.0 pox1 1.2.3.3 - EH ko:K00158 ko00620,ko01100,map00620,map01100 ko00000,ko00001,ko01000 Belongs to the TPP enzyme family
PODMBIKE_01678 0.0 gidA - - D ko:K03495 - ko00000,ko03016,ko03036 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
PODMBIKE_01679 0.0 mnmE - - S ko:K03650 - ko00000,ko01000,ko03016 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
PODMBIKE_01680 4.28e-194 yidC - - U ko:K03217 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044,ko03029 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PODMBIKE_01681 1.48e-82 rnpA 3.1.26.5 - J ko:K03536 - ko00000,ko01000,ko03016 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
PODMBIKE_01682 1.7e-313 dnaA - - L ko:K02313 ko02020,ko04112,map02020,map04112 ko00000,ko00001,ko03032,ko03036 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
PODMBIKE_01683 1.97e-256 dnaN 2.7.7.7 - L ko:K02338 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
PODMBIKE_01684 2.22e-50 yaaA - - S ko:K14761 - ko00000,ko03009 S4 domain protein YaaA
PODMBIKE_01685 2.02e-268 recF - - L ko:K03629 ko03440,map03440 ko00000,ko00001,ko03400 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
PODMBIKE_01686 0.0 gyrB 5.99.1.3 - L ko:K02470 - ko00000,ko01000,ko03032,ko03400 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PODMBIKE_01687 0.0 gyrA 5.99.1.3 - L ko:K02469 - ko00000,ko01000,ko03032,ko03400 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PODMBIKE_01688 1.21e-63 rpsF - - J ko:K02990 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011,ko03029 Binds together with S18 to 16S ribosomal RNA
PODMBIKE_01689 1.79e-126 ssb - - L ko:K03111 ko03030,ko03430,ko03440,map03030,map03430,map03440 ko00000,ko00001,ko03029,ko03032,ko03400 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
PODMBIKE_01690 1.61e-48 rpsR - - J ko:K02963 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
PODMBIKE_01691 0.0 yybT - - T - - - signaling protein consisting of a modified GGDEF domain and a DHH domain
PODMBIKE_01692 6.68e-98 rplI - - J ko:K02939 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds to the 23S rRNA
PODMBIKE_01693 0.0 dnaB 3.6.4.12 - L ko:K02314 ko03030,ko04112,map03030,map04112 ko00000,ko00001,ko01000,ko03032 Participates in initiation and elongation during chromosome replication
PODMBIKE_01694 2.54e-289 - - - S - - - Protein of unknown function (DUF2974)
PODMBIKE_01695 0.0 - - - V - - - ATPases associated with a variety of cellular activities
PODMBIKE_01696 4.46e-90 - - - - - - - -
PODMBIKE_01698 7.96e-158 - - - S ko:K07507 - ko00000,ko02000 MgtC family
PODMBIKE_01700 2.68e-18 - - - L - - - transposase and inactivated derivatives, IS30 family
PODMBIKE_01701 8.73e-188 - - - L - - - the current gene model (or a revised gene model) may contain a frame shift
PODMBIKE_01702 4.86e-74 - - - V ko:K06148 - ko00000,ko02000 ABC-type multidrug transport system, ATPase and permease components
PODMBIKE_01703 1.63e-176 - - - V ko:K06148 - ko00000,ko02000 ABC-type multidrug transport system, ATPase and permease components
PODMBIKE_01705 2.7e-145 ybbL - - S ko:K02068 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
PODMBIKE_01706 2.44e-167 ybbM - - S ko:K02069 - ko00000,ko00002,ko02000 Uncharacterised protein family (UPF0014)
PODMBIKE_01708 0.0 - - - M ko:K07273 - ko00000 Glycosyl hydrolases family 25
PODMBIKE_01709 2.85e-15 - - - K - - - Acetyltransferase (GNAT) domain
PODMBIKE_01710 8.13e-38 - - - K - - - Acetyltransferase (GNAT) domain
PODMBIKE_01711 3.56e-196 pdxK 2.7.1.35 - H ko:K00868 ko00750,ko01100,map00750,map01100 ko00000,ko00001,ko01000 Phosphomethylpyrimidine kinase
PODMBIKE_01712 1.59e-117 - - - S - - - ECF-type riboflavin transporter, S component
PODMBIKE_01713 0.0 - - - L - - - Helicase C-terminal domain protein
PODMBIKE_01714 7.61e-133 - - - T - - - integral membrane protein
PODMBIKE_01715 6.33e-109 - - - S - - - YcxB-like protein
PODMBIKE_01716 1.12e-88 ywnA - - K - - - Transcriptional regulator
PODMBIKE_01717 6.01e-45 qorB 1.6.5.2 - GM ko:K19267 ko00130,ko01110,map00130,map01110 ko00000,ko00001,ko01000 epimerase
PODMBIKE_01718 3.66e-76 qorB 1.6.5.2 - GM ko:K19267 ko00130,ko01110,map00130,map01110 ko00000,ko00001,ko01000 NmrA-like family
PODMBIKE_01719 3.62e-38 dmpI 5.3.2.6 - G ko:K01821 ko00362,ko00621,ko00622,ko01100,ko01120,ko01220,map00362,map00621,map00622,map01100,map01120,map01220 ko00000,ko00001,ko00002,ko01000 Belongs to the 4-oxalocrotonate tautomerase family
PODMBIKE_01721 3.35e-216 cysK 2.5.1.47 - E ko:K01738 ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the cysteine synthase cystathionine beta- synthase family
PODMBIKE_01722 1.33e-91 - - - L - - - DDE superfamily endonuclease
PODMBIKE_01723 1.2e-30 - - - L - - - Transposase
PODMBIKE_01724 6.29e-294 cfa 2.1.1.79 - M ko:K00574 - ko00000,ko01000 cyclopropane-fatty-acyl-phospholipid synthase
PODMBIKE_01725 8.31e-259 pepO - - O ko:K07386 - ko00000,ko01000,ko01002 Peptidase family M13
PODMBIKE_01726 3.32e-239 add 3.5.4.2, 3.5.4.4 - F ko:K01488,ko:K02029,ko:K21053 ko00230,ko01100,ko05340,map00230,map01100,map05340 ko00000,ko00001,ko00002,ko01000,ko02000 Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
PODMBIKE_01727 1.37e-75 - - - - - - - -
PODMBIKE_01728 5.13e-84 - - - S - - - Domain of unknown function DUF1828
PODMBIKE_01729 1.76e-277 - - - EGP - - - Major Facilitator Superfamily
PODMBIKE_01730 0.0 glnA 6.3.1.2 - E ko:K01915 ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727 ko00000,ko00001,ko01000,ko04147 glutamine synthetase
PODMBIKE_01731 3.02e-101 ynbB - - P - - - aluminum resistance
PODMBIKE_01732 1.42e-139 ynbB - - P - - - aluminum resistance
PODMBIKE_01733 1.87e-218 miaA 2.5.1.75 - F ko:K00791 ko00908,ko01100,ko01110,map00908,map01100,map01110 ko00000,ko00001,ko01000,ko01006,ko03016 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
PODMBIKE_01734 8.9e-92 yqhL - - P - - - Rhodanese-like protein
PODMBIKE_01735 2.99e-43 yqgQ - - S - - - Bacterial protein of unknown function (DUF910)
PODMBIKE_01736 9.69e-149 gluP 3.4.21.105 - S ko:K19225 - ko00000,ko01000,ko01002 Rhomboid family
PODMBIKE_01737 4.78e-135 fthC 6.3.3.2 - H ko:K01934 ko00670,ko01100,map00670,map01100 ko00000,ko00001,ko01000 Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
PODMBIKE_01738 2.18e-29 rpmG - - J ko:K02913 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL33 family
PODMBIKE_01739 0.0 pbp2b - - M ko:K00687,ko:K12553,ko:K21465,ko:K21466 ko00550,ko01100,ko01501,map00550,map01100,map01501 ko00000,ko00001,ko01000,ko01011 Penicillin-binding Protein
PODMBIKE_01740 0.0 - - - S - - - membrane
PODMBIKE_01741 2.55e-105 greA - - K ko:K03624 - ko00000,ko03021 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PODMBIKE_01742 0.0 pheT 6.1.1.20 - J ko:K01890 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PODMBIKE_01743 1.96e-252 pheS 6.1.1.20 - J ko:K01889 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
PODMBIKE_01744 8.09e-80 yodB - - K - - - Transcriptional regulator, HxlR family
PODMBIKE_01745 1.04e-172 spoU - - J ko:K03437 - ko00000,ko03016 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PODMBIKE_01746 2.2e-60 acyP 3.6.1.7 - C ko:K01512 ko00620,ko00627,ko01120,map00620,map00627,map01120 ko00000,ko00001,ko01000 Belongs to the acylphosphatase family
PODMBIKE_01747 1.93e-201 yidC - - U ko:K03217 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044,ko03029 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PODMBIKE_01748 0.0 arlS 2.7.13.3 - T ko:K18940 ko02020,map02020 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Histidine kinase
PODMBIKE_01749 1.96e-164 csrR - - K - - - response regulator
PODMBIKE_01750 2.63e-128 ylbN - - S ko:K07040 - ko00000 Uncharacterized ACR, COG1399
PODMBIKE_01751 5.85e-274 ylbM - - S - - - Belongs to the UPF0348 family
PODMBIKE_01752 1.46e-77 rsfS - - J ko:K09710 - ko00000,ko03009 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
PODMBIKE_01753 3.91e-142 yqeK - - H - - - Hydrolase, HD family
PODMBIKE_01754 1.58e-153 nadD 2.7.7.18 - H ko:K00969 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
PODMBIKE_01755 1.16e-270 yqeH - - S ko:K06948 - ko00000,ko03009 Ribosome biogenesis GTPase YqeH
PODMBIKE_01756 2.91e-74 rplT - - J ko:K02887 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
PODMBIKE_01757 1.37e-37 rpmI - - J ko:K02916 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL35 family
PODMBIKE_01758 3.99e-112 infC - - J ko:K02520 - ko00000,ko03012,ko03029 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
PODMBIKE_01759 1.09e-90 - - - L - - - Putative transposase DNA-binding domain
PODMBIKE_01760 1.11e-232 - - - L - - - Putative transposase DNA-binding domain
PODMBIKE_01761 2.29e-145 - - - L - - - Resolvase, N terminal domain
PODMBIKE_01762 0.0 - - - S ko:K06921 - ko00000 Archaea bacterial proteins of unknown function
PODMBIKE_01763 0.0 thrS 6.1.1.3 - J ko:K01868 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
PODMBIKE_01764 4.07e-217 dnaI - - L ko:K11144 - ko00000,ko03032 Primosomal protein DnaI
PODMBIKE_01765 5.47e-314 dnaB2 - - L ko:K03346 - ko00000,ko03032 Replication initiation and membrane attachment
PODMBIKE_01766 1.57e-107 nrdR - - K ko:K07738 - ko00000,ko03000 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
PODMBIKE_01767 1.03e-131 coaE 2.7.1.24 - F ko:K00859 ko00770,ko01100,map00770,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
PODMBIKE_01768 2.96e-202 fpg 3.2.2.23, 4.2.99.18 - L ko:K10563 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
PODMBIKE_01769 0.0 polA 2.7.7.7 - L ko:K02335 ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440 ko00000,ko00001,ko01000,ko03032,ko03400 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
PODMBIKE_01770 2.79e-48 - - - EGP - - - Major Facilitator
PODMBIKE_01771 2.12e-146 - - - EGP - - - Major Facilitator
PODMBIKE_01772 3.97e-19 - - - EGP - - - Major facilitator Superfamily
PODMBIKE_01774 0.0 murC 6.3.2.8 - M ko:K01924 ko00471,ko00550,ko01100,map00471,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Belongs to the MurCDEF family
PODMBIKE_01775 1.7e-154 XK27_10290 - - J ko:K06878 - ko00000 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PODMBIKE_01776 9.52e-72 ytpP - - CO - - - Thioredoxin
PODMBIKE_01777 1.64e-158 trmB 2.1.1.33 - J ko:K03439 - ko00000,ko01000,ko03016 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
PODMBIKE_01778 7.71e-276 ecsB - - U ko:K01992 - ko00000,ko00002,ko02000 ABC transporter
PODMBIKE_01779 1.43e-174 ecsA - - V ko:K01990 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
PODMBIKE_01780 2.77e-103 hit - - FG ko:K02503 - ko00000,ko04147 Scavenger mRNA decapping enzyme C-term binding
PODMBIKE_01781 1.4e-71 - - - - - - - -
PODMBIKE_01782 2.87e-218 pyrD 1.3.1.14, 1.3.98.1 - F ko:K00226,ko:K17828 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
PODMBIKE_01783 2.5e-173 pyrF 4.1.1.23 - F ko:K01591 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
PODMBIKE_01784 9.14e-146 pyrE 2.4.2.10 - F ko:K00762 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
PODMBIKE_01785 8.28e-199 prsA 5.2.1.8 - M ko:K07533 - ko00000,ko01000,ko03110 Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
PODMBIKE_01786 1.01e-63 aroA 2.5.1.19 - E ko:K00800 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
PODMBIKE_01787 3.8e-88 aroK 1.1.1.25, 2.7.1.71, 4.2.1.10, 4.2.3.4 - F ko:K00014,ko:K00891,ko:K03785,ko:K03786,ko:K13829,ko:K15546 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000,ko03000 shikimate kinase activity
PODMBIKE_01788 1.28e-229 yhaM - - S ko:K03698 - ko00000,ko01000,ko03019 Metal dependent phosphohydrolases with conserved 'HD' motif.
PODMBIKE_01789 0.0 yhaN - - L - - - AAA domain
PODMBIKE_01790 8.89e-289 yhaO - - L ko:K03547 - ko00000,ko03400 Ser Thr phosphatase family protein
PODMBIKE_01791 3.16e-73 yheA - - S - - - Belongs to the UPF0342 family
PODMBIKE_01792 0.0 pbp2A 2.4.1.129, 3.4.16.4 GT51 M ko:K12555 ko00550,ko01100,ko01501,map00550,map01100,map01501 ko00000,ko00001,ko01000,ko01003,ko01011 penicillin-binding protein
PODMBIKE_01793 7.86e-207 rluA 5.4.99.23, 5.4.99.28, 5.4.99.29 - J ko:K06177,ko:K06180 - ko00000,ko01000,ko03009,ko03016 Responsible for synthesis of pseudouridine from uracil
PODMBIKE_01794 9.99e-216 fba 4.1.2.13, 4.1.2.29 - G ko:K01624,ko:K03339 ko00010,ko00030,ko00051,ko00562,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00562,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Fructose-1,6-bisphosphate aldolase, class II
PODMBIKE_01795 5.56e-125 - - - M - - - ErfK YbiS YcfS YnhG
PODMBIKE_01796 3.69e-75 - 3.4.22.70 - M ko:K07284 - ko00000,ko01000,ko01002,ko01011 Sortase family
PODMBIKE_01797 5.18e-76 - - - - - - - -
PODMBIKE_01798 1.07e-98 - - - L ko:K07496 - ko00000 Putative transposase DNA-binding domain
PODMBIKE_01799 2.16e-07 tnpB - - L ko:K07496 - ko00000 Putative transposase DNA-binding domain
PODMBIKE_01801 0.0 - - - M - - - ErfK YbiS YcfS YnhG
PODMBIKE_01802 1.99e-203 nnrD 4.2.1.136, 5.1.99.6 - H ko:K17758,ko:K17759 - ko00000,ko01000 Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
PODMBIKE_01803 2.91e-294 dacA 3.4.16.4 - M ko:K07258 ko00550,ko01100,map00550,map01100 ko00000,ko00001,ko01000,ko01002,ko01011 Belongs to the peptidase S11 family
PODMBIKE_01805 1.2e-117 - 1.2.3.3 - EH ko:K00158 ko00620,ko01100,map00620,map01100 ko00000,ko00001,ko01000 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
PODMBIKE_01806 1.69e-63 pox1 1.2.3.3 - EH ko:K00158 ko00620,ko01100,map00620,map01100 ko00000,ko00001,ko01000 Belongs to the TPP enzyme family
PODMBIKE_01807 2.25e-182 pox1 1.2.3.3 - EH ko:K00158 ko00620,ko01100,map00620,map01100 ko00000,ko00001,ko01000 Belongs to the TPP enzyme family
PODMBIKE_01810 4.01e-192 - - - T - - - Putative diguanylate phosphodiesterase
PODMBIKE_01811 3.87e-89 - - - T - - - domain protein
PODMBIKE_01812 4.02e-237 - - - M - - - Glycosyl transferase family 8
PODMBIKE_01813 0.0 radA - - O ko:K04485 - ko00000,ko03400 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
PODMBIKE_01814 1.09e-128 dut 3.6.1.23 - F ko:K01520 ko00240,ko00983,ko01100,map00240,map00983,map01100 ko00000,ko00001,ko00002,ko01000,ko03400 dUTP diphosphatase
PODMBIKE_01815 7.39e-65 - - - - - - - -
PODMBIKE_01816 0.0 pepC 3.4.22.40 - E ko:K01372 - ko00000,ko01000,ko01002 Peptidase C1-like family
PODMBIKE_01818 4.68e-234 - - - S - - - AAA domain
PODMBIKE_01819 8.76e-104 fabZ 4.2.1.59 - I ko:K02372 ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
PODMBIKE_01820 1.02e-160 gpmA1 5.4.2.11 - G ko:K01834 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PODMBIKE_01821 8.57e-41 - - - - - - - -
PODMBIKE_01822 2.88e-39 - - - - - - - -
PODMBIKE_01823 5.92e-165 - - - G - - - Belongs to the phosphoglycerate mutase family
PODMBIKE_01824 6.9e-163 - - - S ko:K07090 - ko00000 membrane transporter protein
PODMBIKE_01825 7.93e-140 thiJ 3.5.1.124 - S ko:K03152 - ko00000,ko01000,ko01002 DJ-1/PfpI family
PODMBIKE_01826 5.51e-123 - - - K - - - Acetyltransferase (GNAT) family
PODMBIKE_01827 2.03e-251 ykfB 5.1.1.20 - M ko:K19802 - ko00000,ko01000 Belongs to the mandelate racemase muconate lactonizing enzyme family
PODMBIKE_01829 5.86e-133 - 3.5.2.6 - V ko:K17836 ko00311,ko01130,ko01501,map00311,map01130,map01501 ko00000,ko00001,ko00002,ko01000,ko01504 Beta-lactamase
PODMBIKE_01830 2.21e-177 - - - K - - - Helix-turn-helix domain, rpiR family
PODMBIKE_01831 0.0 pepV 3.5.1.18 - E ko:K01270,ko:K01274,ko:K01439 ko00300,ko00480,ko01100,ko01120,ko01230,map00300,map00480,map01100,map01120,map01230 ko00000,ko00001,ko00002,ko01000,ko01002 dipeptidase PepV
PODMBIKE_01832 6.17e-62 cycA - - E ko:K03293,ko:K11737 - ko00000,ko02000 Amino acid permease
PODMBIKE_01833 3.43e-213 cycA - - E ko:K03293,ko:K11737 - ko00000,ko02000 Amino acid permease
PODMBIKE_01834 3.01e-11 - - - K ko:K02530 - ko00000,ko03000 DeoR C terminal sensor domain
PODMBIKE_01835 0.0 aspA 4.3.1.1 - E ko:K01744 ko00250,ko01100,map00250,map01100 ko00000,ko00001,ko01000 Fumarase C C-terminus
PODMBIKE_01836 8.89e-123 - - - D - - - nuclear chromosome segregation
PODMBIKE_01837 2.05e-54 - - - D - - - nuclear chromosome segregation
PODMBIKE_01838 2.59e-129 - - - M - - - LysM domain protein
PODMBIKE_01842 3.72e-203 thrB 2.7.1.39 - F ko:K00872 ko00260,ko01100,ko01110,ko01120,ko01230,map00260,map01100,map01110,map01120,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
PODMBIKE_01843 0.0 thrC 4.2.3.1 - E ko:K01733 ko00260,ko00750,ko01100,ko01110,ko01120,ko01230,map00260,map00750,map01100,map01110,map01120,map01230 ko00000,ko00001,ko00002,ko01000 Threonine synthase
PODMBIKE_01847 5.93e-129 - 2.3.1.128 - K ko:K03790 - ko00000,ko01000,ko03009 Acetyltransferase (GNAT) domain
PODMBIKE_01848 3.2e-137 yiiE - - S - - - Protein of unknown function (DUF1211)
PODMBIKE_01849 3.18e-34 - - - - - - - -
PODMBIKE_01850 1.96e-119 scrR - - K ko:K02529,ko:K03484 - ko00000,ko03000 Transcriptional regulator, LacI family
PODMBIKE_01851 9.56e-138 scrB 3.2.1.26 GH32 G ko:K01193 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 invertase
PODMBIKE_01852 1.91e-67 scrB 3.2.1.26 GH32 G ko:K01193 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 invertase
PODMBIKE_01853 1.86e-103 - 2.7.1.211 - G ko:K02755,ko:K02756,ko:K02757,ko:K02777,ko:K02808,ko:K02809,ko:K02810 ko00010,ko00500,ko00520,ko02026,ko02060,ko05111,map00010,map00500,map00520,map02026,map02060,map05111 ko00000,ko00001,ko00002,ko01000,ko02000 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
PODMBIKE_01854 9.39e-256 - 2.7.1.11, 2.7.1.90 - F ko:K21071 ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130 ko00000,ko00001,ko01000 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
PODMBIKE_01855 0.0 pgm 5.4.2.2 - G ko:K01835 ko00010,ko00030,ko00052,ko00230,ko00500,ko00520,ko00521,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00052,map00230,map00500,map00520,map00521,map01100,map01110,map01120,map01130 ko00000,ko00001,ko00002,ko01000 Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
PODMBIKE_01856 4.17e-298 malZ 3.2.1.20, 3.2.1.41 CBM48,GH13,GH31 G ko:K01187,ko:K01200 ko00052,ko00500,ko01100,ko01110,map00052,map00500,map01100,map01110 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 13 family
PODMBIKE_01857 0.0 speA 4.1.1.17, 4.1.1.18, 4.1.1.19 - E ko:K01581,ko:K01582,ko:K01585 ko00310,ko00330,ko00480,ko00960,ko01100,ko01110,ko01130,map00310,map00330,map00480,map00960,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Orn/Lys/Arg decarboxylase, C-terminal domain
PODMBIKE_01858 0.0 - - - E - - - Amino acid permease
PODMBIKE_01859 1.02e-74 - - - L - - - Transposase and inactivated derivatives, IS30 family
PODMBIKE_01860 1.23e-252 - - - G - - - Major Facilitator Superfamily
PODMBIKE_01861 8.08e-261 - - - L - - - COG2826 Transposase and inactivated derivatives, IS30 family
PODMBIKE_01863 1.83e-91 malS 3.2.1.1 GH13 G ko:K01176 ko00500,ko01100,ko04973,map00500,map01100,map04973 ko00000,ko00001,ko01000 Glycogen debranching enzyme, glucanotransferase domain
PODMBIKE_01864 3.59e-140 malS 3.2.1.1 GH13 G ko:K01176 ko00500,ko01100,ko04973,map00500,map01100,map04973 ko00000,ko00001,ko01000 Glycogen debranching enzyme, glucanotransferase domain
PODMBIKE_01865 1.58e-16 malS 3.2.1.1 GH13 G ko:K01176 ko00500,ko01100,ko04973,map00500,map01100,map04973 ko00000,ko00001,ko01000 Glycogen debranching enzyme, glucanotransferase domain
PODMBIKE_01866 2.08e-283 oxlT - - P ko:K08177 - ko00000,ko02000 Major Facilitator Superfamily
PODMBIKE_01869 3.39e-63 - - - - - - - -
PODMBIKE_01870 0.0 - - - L - - - Helicase conserved C-terminal domain
PODMBIKE_01871 2.74e-242 galE 5.1.3.2 - M ko:K01784 ko00052,ko00520,ko01100,map00052,map00520,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the NAD(P)-dependent epimerase dehydratase family
PODMBIKE_01872 3e-10 - - - K - - - Helix-turn-helix domain
PODMBIKE_01874 3.33e-207 - 3.4.14.13 - M ko:K20742 - ko00000,ko01000,ko01002 NlpC/P60 family
PODMBIKE_01875 6.92e-314 cycA - - E ko:K03293,ko:K11737 - ko00000,ko02000 Amino acid permease
PODMBIKE_01876 3.77e-08 - - - - - - - -
PODMBIKE_01877 1.35e-82 - - - S - - - Domain of unknown function (DUF956)
PODMBIKE_01878 5.13e-214 manN - - G ko:K02796 ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060 ko00000,ko00001,ko00002,ko02000 system, mannose fructose sorbose family IID component
PODMBIKE_01879 9.98e-179 manY - - G ko:K02746,ko:K02795 ko00051,ko00052,ko00520,ko01100,ko02060,map00051,map00052,map00520,map01100,map02060 ko00000,ko00001,ko00002,ko02000 PTS system
PODMBIKE_01880 2.72e-238 manL 2.7.1.191 - G ko:K02793,ko:K02794 ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system sorbose subfamily IIB component
PODMBIKE_01881 8.36e-52 - - - L - - - DDE superfamily endonuclease
PODMBIKE_01882 1.67e-28 - - - L - - - DDE superfamily endonuclease
PODMBIKE_01883 3.35e-137 - - - L - - - DDE superfamily endonuclease
PODMBIKE_01884 3.36e-111 - - - L - - - COG3547 Transposase and inactivated derivatives

eggNOG-mapper v2.1.12 (Database: eggNOG v5.0.2, Mar. 2021 release)