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ORF_ID	e_value	Gene_name	EC_number	CAZy	COGs	KEGG_ko	KEGG_Pathway	BRITE	Description
PCFPDMBM_00001	3.2e-21	csgB	-	-	S	ko:K04335	ko02026,map02026	ko00000,ko00001,ko02044	Curlin associated repeat
PCFPDMBM_00002	1.73e-39	csgA	-	-	S	ko:K04334	ko02026,map02026	ko00000,ko00001,ko02044	major curlin subunit
PCFPDMBM_00003	1.15e-64	csgC	-	-	O	ko:K04336	ko02026,map02026	ko00000,ko00001,ko02044	Curli assembly protein
PCFPDMBM_00004	4.34e-25	-	-	-	-	-	-	-	-
PCFPDMBM_00005	1.46e-106	ymdB	-	-	S	-	-	-	Deacetylates O-acetyl-ADP ribose. Down-regulates ribonuclease 3 (RNase III) activity. Acts by interacting directly with the region of the ribonuclease that is required for dimerization activation
PCFPDMBM_00006	5.88e-304	clsC	-	-	I	ko:K06132	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	COG1502 Phosphatidylserine phosphatidylglycerophosphate cardiolipi n synthases and related enzymes
PCFPDMBM_00007	4.15e-259	mdoC	-	-	I	ko:K11941	-	ko00000,ko01000	Necessary for the succinyl substitution of periplasmic glucans. Could catalyze the transfer of succinyl residues from the cytoplasmic side of the membrane to the nascent glucan backbones on the periplasmic side of the membrane
PCFPDMBM_00008	0.0	mdoG	-	-	P	ko:K03670	-	ko00000	Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs)
PCFPDMBM_00009	0.0	mdoH	-	GT2	M	ko:K03669	-	ko00000,ko01000,ko01003,ko02000	Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs)
PCFPDMBM_00010	2.73e-50	yceK	-	-	S	-	-	-	(Lipo)protein
PCFPDMBM_00011	9.54e-85	msyB	-	-	S	ko:K12147	-	ko00000	SecY secA suppressor protein
PCFPDMBM_00012	4.4e-259	mdtG	-	-	P	ko:K08161	-	ko00000,ko02000	Multidrug resistance protein MdtG
PCFPDMBM_00013	2.77e-220	lpxL	2.3.1.241, 2.3.1.242	-	M	ko:K02517,ko:K12974	ko00540,ko01100,map00540,map01100	ko00000,ko00001,ko00002,ko01000,ko01005	Catalyzes the transfer of laurate from lauroyl-acyl carrier protein (ACP) to Kdo(2)-lipid IV(A) to form Kdo(2)- (lauroyl)-lipid IV(A)
PCFPDMBM_00014	7.98e-252	yceA	-	-	S	ko:K07146	-	ko00000	Belongs to the UPF0176 family
PCFPDMBM_00015	3.91e-130	yceI	-	-	S	-	-	-	Belongs to the UPF0312 family
PCFPDMBM_00016	5.37e-123	yceJ	-	-	C	ko:K12262	-	ko00000	cytochrome b561
PCFPDMBM_00017	9.32e-12	-	-	-	S	-	-	-	Protein of unknown function (DUF2770)
PCFPDMBM_00018	1.98e-273	solA	-	-	E	ko:K02846	-	ko00000,ko01000	Belongs to the MSOX MTOX family. MTOX subfamily
PCFPDMBM_00019	7.94e-54	bssS	-	-	S	ko:K12148	-	ko00000,ko02048	disruption of this gene in Escherichia coli led to effects on biofilm formation, alteration in expression of a number of genes and mutations in bssS led to defects in indole transport and autoinducer-2 uptake and processing
PCFPDMBM_00020	2e-48	dinI	-	-	S	ko:K12149	-	ko00000,ko03400	damage-inducible protein I
PCFPDMBM_00021	1.01e-249	pyrC	3.5.2.3	-	F	ko:K01465	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate
PCFPDMBM_00022	3.92e-123	yceB	-	-	S	-	-	-	(Lipo)protein
PCFPDMBM_00023	8.67e-276	mdtH	-	-	U	ko:K08162	-	ko00000,ko02000	Multidrug resistance protein mdtH
PCFPDMBM_00024	1.6e-144	rimJ	2.3.1.128	-	J	ko:K03790	-	ko00000,ko01000,ko03009	COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins
PCFPDMBM_00025	1.72e-136	yceH	-	-	S	ko:K09915	-	ko00000	Belongs to the UPF0502 family
PCFPDMBM_00026	1.52e-212	mviM	-	-	S	ko:K03810	-	ko00000	oxidoreductase
PCFPDMBM_00027	0.0	murJ	-	-	S	ko:K03980	-	ko00000,ko01011,ko02000	Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane
PCFPDMBM_00028	1.74e-81	flgN	-	-	N	ko:K02399	ko02040,map02040	ko00000,ko00001,ko02035	Flagellar biosynthesis protein
PCFPDMBM_00029	3.21e-45	flgM	-	-	KNU	ko:K02398	ko02020,ko02025,ko02026,ko02040,map02020,map02025,map02026,map02040	ko00000,ko00001,ko02035	Anti-sigma-28 factor FlgM
PCFPDMBM_00030	1.11e-131	flgA	-	-	N	ko:K02386	ko02040,map02040	ko00000,ko00001,ko02035	Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly
PCFPDMBM_00031	1.51e-88	flgB	-	-	N	ko:K02387	ko02040,map02040	ko00000,ko00001,ko02035	Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body
PCFPDMBM_00032	3.34e-83	flgC	-	-	N	ko:K02388	ko02040,map02040	ko00000,ko00001,ko02035	Belongs to the flagella basal body rod proteins family
PCFPDMBM_00033	2.1e-137	flgD	-	-	N	ko:K02389	ko02040,map02040	ko00000,ko00001,ko02035	Required for flagellar hook formation. May act as a scaffolding protein
PCFPDMBM_00034	1.56e-278	flgE	-	-	N	ko:K02390	ko02040,map02040	ko00000,ko00001,ko02035	Flagellar hook protein flgE
PCFPDMBM_00035	1.8e-167	flgF	-	-	N	ko:K02391	ko02040,map02040	ko00000,ko00001,ko02035	flagellar basal body
PCFPDMBM_00036	9.73e-181	flgG	-	-	N	ko:K02392	ko02040,map02040	ko00000,ko00001,ko02035	Belongs to the flagella basal body rod proteins family
PCFPDMBM_00037	3.77e-158	flgH	-	-	N	ko:K02393	ko02040,map02040	ko00000,ko00001,ko02035	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
PCFPDMBM_00038	9.09e-241	flgI	-	-	N	ko:K02394	ko02040,map02040	ko00000,ko00001,ko02035	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
PCFPDMBM_00039	4.58e-219	flgJ	-	-	N	ko:K02395	-	ko00000,ko02035	Flagellar rod assembly protein muramidase FlgJ
PCFPDMBM_00040	0.0	flgK	-	-	N	ko:K02396	ko02040,map02040	ko00000,ko00001,ko02035	flagellar hook-associated protein
PCFPDMBM_00041	5.46e-195	flgL	-	-	N	ko:K02397	ko02040,map02040	ko00000,ko00001,ko02035	Belongs to the bacterial flagellin family
PCFPDMBM_00042	2.79e-213	ynfM_3	-	-	EGP	-	-	-	Major facilitator superfamily
PCFPDMBM_00043	5.69e-205	ttdR	-	-	K	-	-	-	transcriptional regulator
PCFPDMBM_00044	0.0	rne	3.1.26.12	-	J	ko:K08300	ko03018,map03018	ko00000,ko00001,ko00002,ko01000,ko03009,ko03019	Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs
PCFPDMBM_00045	4.04e-212	rluC	5.4.99.24	-	J	ko:K06179	-	ko00000,ko01000,ko03009	Responsible for synthesis of pseudouridine from uracil
PCFPDMBM_00046	3.76e-134	yceF	-	-	D	ko:K06287	-	ko00000	Maf-like protein
PCFPDMBM_00047	1.84e-117	yceD	-	-	S	ko:K07040	-	ko00000	metal-binding, possibly nucleic acid-binding protein
PCFPDMBM_00048	1.39e-33	rpmF	-	-	J	ko:K02911	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Belongs to the bacterial ribosomal protein bL32 family
PCFPDMBM_00049	4.43e-176	plsX	2.3.1.15	-	I	ko:K03621	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
PCFPDMBM_00050	1.17e-221	fabH	2.3.1.180	-	I	ko:K00648	ko00061,ko01100,ko01212,map00061,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
PCFPDMBM_00051	2.53e-212	fabD	2.3.1.39	-	I	ko:K00645	ko00061,ko00333,ko01100,ko01130,ko01212,map00061,map00333,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	malonyl CoA-acyl carrier protein transacylase
PCFPDMBM_00052	2.08e-158	fabG	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	reductase
PCFPDMBM_00053	2.13e-44	acpP	-	-	IQ	ko:K02078	-	ko00000,ko00001	Carrier of the growing fatty acid chain in fatty acid biosynthesis
PCFPDMBM_00054	1.18e-290	fabF	2.3.1.179	-	I	ko:K09458	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
PCFPDMBM_00055	2.54e-160	pabC	4.1.3.38	-	EH	ko:K02619	ko00790,map00790	ko00000,ko00001,ko01000	4-amino-4-deoxychorismate lyase
PCFPDMBM_00056	6.64e-235	mltG	-	-	F	ko:K07082	-	ko00000	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
PCFPDMBM_00057	3.51e-137	tmk	2.7.4.9	-	F	ko:K00943	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
PCFPDMBM_00058	2.12e-228	holB	2.7.7.7	-	L	ko:K02341	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	dna polymerase iii
PCFPDMBM_00059	5.46e-189	ycfH	-	-	L	ko:K03424	-	ko00000,ko01000	TatD family
PCFPDMBM_00060	0.0	ptsG	2.7.1.193, 2.7.1.199	-	G	ko:K02778,ko:K02779,ko:K02803,ko:K02804	ko00010,ko00520,ko02060,ko05111,map00010,map00520,map02060,map05111	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, glucose-specific IIBC subunit
PCFPDMBM_00061	0.0	fhuE	-	-	P	ko:K16088	-	ko00000,ko02000	receptor
PCFPDMBM_00062	5.86e-79	hinT	-	-	FG	ko:K02503	-	ko00000,ko04147	COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
PCFPDMBM_00063	3.49e-50	ycfL	-	-	S	-	-	-	cellular response to DNA damage stimulus
PCFPDMBM_00064	2.61e-129	lpoB	-	-	M	ko:K07337	-	ko00000	Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1B (PBP1b)
PCFPDMBM_00065	1.07e-175	thiK	2.7.1.89	-	M	ko:K07251	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000	Catalyzes the phosphorylation of thiamine to thiamine phosphate
PCFPDMBM_00066	2.84e-241	nagZ	3.2.1.52	-	G	ko:K01207	ko00520,ko00531,ko01100,ko01501,map00520,map00531,map01100,map01501	ko00000,ko00001,ko00002,ko01000	Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide-linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N-acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides
PCFPDMBM_00067	2.22e-135	ycfP	-	-	S	ko:K07000	-	ko00000	Belongs to the UPF0227 family
PCFPDMBM_00068	4.74e-303	ndh	1.6.99.3	-	C	ko:K03885	ko00190,map00190	ko00000,ko00001,ko01000	PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase
PCFPDMBM_00069	9.98e-109	ycfJ	-	-	S	-	-	-	Outer Membrane Lipoprotein
PCFPDMBM_00070	2.21e-139	ycfQ	-	-	K	ko:K22041	-	ko00000,ko03000	Transcriptional regulator
PCFPDMBM_00071	4.26e-45	bhsA	-	-	S	ko:K12151	-	ko00000,ko02048	Protein of unknown function (DUF1471)
PCFPDMBM_00072	1.53e-217	ycfS	-	-	M	ko:K16291,ko:K19234,ko:K19235,ko:K19236	ko01503,map01503	ko00000,ko00001,ko01002,ko01011	ErfK YbiS YcfS YnhG family protein
PCFPDMBM_00073	0.0	mfd	-	-	L	ko:K03723	ko03420,map03420	ko00000,ko00001,ko01000,ko03400	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
PCFPDMBM_00074	1.86e-245	ycfT	-	-	S	-	-	-	Acyltransferase
PCFPDMBM_00075	8.54e-252	lolC	-	-	M	ko:K09808	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Lipoprotein releasing system transmembrane protein
PCFPDMBM_00076	3.26e-161	lolD	-	-	V	ko:K09810	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex LolCDE involved in the translocation of
PCFPDMBM_00077	7.36e-274	lolE	-	-	M	ko:K09808	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Lipoprotein releasing system transmembrane protein
PCFPDMBM_00078	3.63e-218	nagK	2.7.1.2, 2.7.1.59	-	F	ko:K00845,ko:K00884	ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of N-acetyl-D-glucosamine (GlcNAc) derived from cell-wall degradation, yielding GlcNAc-6-P
PCFPDMBM_00079	3.09e-179	cobB	-	-	K	ko:K12410	-	ko00000,ko01000	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
PCFPDMBM_00082	3.76e-245	potD	-	-	P	ko:K11069	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Required for the activity of the bacterial periplasmic transport system of putrescine
PCFPDMBM_00083	1.24e-166	potC	-	-	P	ko:K11070,ko:K11074	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC-type spermidine putrescine transport system, permease component II
PCFPDMBM_00084	9.64e-189	potB	-	-	P	ko:K11071	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC-type spermidine putrescine transport system, permease component I
PCFPDMBM_00085	3.76e-267	potA	3.6.3.31	-	P	ko:K02052,ko:K11072,ko:K11076	ko02010,ko02024,map02010,map02024	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
PCFPDMBM_00086	1.96e-293	pepT	3.4.11.4	-	E	ko:K01258	-	ko00000,ko01000,ko01002	Cleaves the N-terminal amino acid of tripeptides
PCFPDMBM_00087	1.49e-275	ycfD	1.14.11.47	-	S	ko:K18850	-	ko00000,ko01000,ko03009	Cupin 4 family protein
PCFPDMBM_00088	0.0	phoQ	2.7.13.3	-	T	ko:K07637	ko01503,ko02020,map01503,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko01504,ko02022	Histidine kinase
PCFPDMBM_00089	4.14e-155	phoP	-	-	K	ko:K07660	ko01503,ko02020,map01503,map02020	ko00000,ko00001,ko00002,ko01504,ko02022	Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PCFPDMBM_00090	0.0	purB	4.3.2.2	-	F	ko:K01756	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
PCFPDMBM_00091	9.03e-138	hflD	-	-	S	ko:K07153	-	ko00000	High frequency lysogenization protein hflD homolog
PCFPDMBM_00092	2.02e-271	mnmA	2.8.1.13	-	J	ko:K00566	ko04122,map04122	ko00000,ko00001,ko01000,ko03016	Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
PCFPDMBM_00093	5.44e-109	nudJ	-	-	L	ko:K12152	-	ko00000,ko01000	Belongs to the Nudix hydrolase family. NudJ subfamily
PCFPDMBM_00094	5.74e-136	rluE	5.4.99.20	-	J	ko:K06181	-	ko00000,ko01000,ko03009	RNA pseudouridylate synthase
PCFPDMBM_00095	1.72e-305	icd	1.1.1.42	-	C	ko:K00031	ko00020,ko00480,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,ko04146,map00020,map00480,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230,map04146	br01601,ko00000,ko00001,ko00002,ko01000	Isocitrate dehydrogenase
PCFPDMBM_00096	9.53e-43	-	-	-	-	-	-	-	-
PCFPDMBM_00098	3.17e-50	yeaQ	-	-	S	-	-	-	transglycosylase associated protein
PCFPDMBM_00099	2.73e-12	yoaK	-	-	-	-	-	-	-
PCFPDMBM_00100	1.06e-59	yeaP	2.7.7.65	-	T	ko:K13069,ko:K21021	ko02025,map02025	ko00000,ko00001,ko01000	Diguanylate cyclase
PCFPDMBM_00101	6.8e-109	yeaP	2.7.7.65	-	T	ko:K13069,ko:K21021	ko02025,map02025	ko00000,ko00001,ko01000	Diguanylate cyclase with GAF sensor
PCFPDMBM_00102	3.99e-64	-	-	-	-	-	-	-	-
PCFPDMBM_00103	8.83e-65	yeaO	-	-	S	-	-	-	MarR family transcriptional regulator
PCFPDMBM_00104	5.14e-155	pyrG2	6.3.4.2	-	F	ko:K01937	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	CTP synthase
PCFPDMBM_00105	1.54e-254	yeaN	-	-	P	ko:K03449	-	ko00000,ko02000	Major facilitator superfamily
PCFPDMBM_00106	2.97e-174	yeaM	-	-	K	-	-	-	Transcriptional regulator
PCFPDMBM_00107	2.73e-91	yeaL	-	-	S	-	-	-	UPF0756 membrane protein
PCFPDMBM_00108	0.0	oprC	-	-	P	ko:K02014	-	ko00000,ko02000	Receptor
PCFPDMBM_00109	1.35e-291	yeaH	-	-	S	ko:K09786	-	ko00000	Belongs to the UPF0229 family
PCFPDMBM_00110	0.0	yeaG	-	-	T	ko:K07180	-	ko00000	Serine Protein Kinase
PCFPDMBM_00111	1.34e-181	mipA	-	-	M	ko:K07274	-	ko00000,ko02000	MltA-interacting protein
PCFPDMBM_00112	1.73e-186	yeaE	-	-	S	-	-	-	Aldo keto
PCFPDMBM_00113	1.86e-211	yeaD	5.1.3.15	-	G	ko:K01792	ko00010,ko01100,ko01110,ko01120,ko01130,map00010,map01100,map01110,map01120,map01130	ko00000,ko00001,ko01000	Belongs to the glucose-6-phosphate 1-epimerase family
PCFPDMBM_00114	1.46e-238	gapA	1.2.1.12	-	C	ko:K00134	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
PCFPDMBM_00115	2.24e-96	msrB	1.8.4.12	-	C	ko:K07305	-	ko00000,ko01000	methionine sulfoxide reductase
PCFPDMBM_00116	1.72e-54	yeaC	-	-	S	ko:K09916	-	ko00000	protein conserved in bacteria
PCFPDMBM_00117	9.83e-281	chiA1	3.2.1.14	GH18	M	ko:K01183	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Glyco_18
PCFPDMBM_00118	2.83e-152	pncA	3.5.1.19	-	Q	ko:K08281	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Nicotinamidase
PCFPDMBM_00119	2.34e-241	ansA	3.5.1.1	-	EJ	ko:K01424	ko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110	ko00000,ko00001,ko01000	COG0252 L-asparaginase archaeal Glu-tRNAGln amidotransferase subunit D
PCFPDMBM_00120	0.0	sppA	-	-	OU	ko:K04773	-	ko00000,ko01000,ko01002	Signal peptide peptidase
PCFPDMBM_00121	9.71e-127	ydjA	-	-	C	-	-	-	Nitroreductase
PCFPDMBM_00122	2.55e-247	selD	2.7.9.3	-	F	ko:K01008	ko00450,ko01100,map00450,map01100	ko00000,ko00001,ko01000,ko03016	Synthesizes selenophosphate from selenide and ATP
PCFPDMBM_00123	0.0	topB	5.99.1.2	-	L	ko:K03169	-	ko00000,ko01000,ko03032	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
PCFPDMBM_00124	0.0	gdhA	1.4.1.4	-	E	ko:K00262	ko00220,ko00250,ko00910,ko01100,map00220,map00250,map00910,map01100	ko00000,ko00001,ko01000	Belongs to the Glu Leu Phe Val dehydrogenases family
PCFPDMBM_00125	2.54e-60	ynjH	-	-	S	-	-	-	Protein of unknown function (DUF1496)
PCFPDMBM_00126	3.9e-82	nudG	3.6.1.55, 3.6.1.65	-	L	ko:K03574,ko:K08320	-	ko00000,ko01000,ko03400	belongs to the nudix hydrolase family
PCFPDMBM_00127	7.44e-114	ynjA	-	-	S	-	-	-	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
PCFPDMBM_00128	1.33e-135	ynjF	2.7.8.39	-	I	ko:K17884	-	ko00000,ko01000	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
PCFPDMBM_00129	2.33e-299	ynjE	2.8.1.11	-	M	ko:K21028	ko04122,map04122	ko00000,ko00001,ko01000	sulfurtransferase
PCFPDMBM_00130	2.16e-125	ynjD	-	-	S	ko:K05779	-	ko00000,ko00002,ko02000	ABC transporter
PCFPDMBM_00131	7.74e-312	ynjC	-	-	P	ko:K05778	-	ko00000,ko00002,ko02000	transport system permease component
PCFPDMBM_00132	5.53e-266	ynjB	-	-	S	ko:K05777	-	ko00000,ko00002,ko02000	transport system periplasmic component
PCFPDMBM_00133	2.75e-130	merA	-	-	M	-	-	-	Pfam SNARE associated Golgi protein
PCFPDMBM_00134	2.52e-195	xthA	3.1.11.2	-	L	ko:K01142	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Exodeoxyribonuclease III
PCFPDMBM_00135	1.37e-290	argD	2.6.1.11, 2.6.1.17, 2.6.1.81	-	E	ko:K00821,ko:K00840	ko00220,ko00300,ko00330,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00220,map00300,map00330,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	aminotransferase
PCFPDMBM_00136	1.59e-244	astA	2.3.1.109	-	E	ko:K00673	ko00330,ko01100,map00330,map01100	ko00000,ko00001,ko01000	arginine N-succinyltransferase
PCFPDMBM_00137	0.0	astD	1.2.1.71	-	C	ko:K06447	ko00330,ko01100,map00330,map01100	ko00000,ko00001,ko01000	Catalyzes the NAD-dependent reduction of succinylglutamate semialdehyde into succinylglutamate
PCFPDMBM_00138	3.19e-300	astB	3.5.3.23	-	E	ko:K01484	ko00330,ko01100,map00330,map01100	ko00000,ko00001,ko01000	Catalyzes the hydrolysis of N(2)-succinylarginine into N(2)-succinylornithine, ammonia and CO(2)
PCFPDMBM_00139	5.58e-222	astE	3.5.1.96	-	E	ko:K05526	ko00330,ko01100,map00330,map01100	ko00000,ko00001,ko01000	Belongs to the AspA AstE family. Succinylglutamate desuccinylase subfamily
PCFPDMBM_00140	7.41e-92	spy	-	-	NPTU	ko:K06006	-	ko00000,ko03110	Heavy-metal resistance
PCFPDMBM_00141	8.29e-129	ves	-	-	S	ko:K09975	-	ko00000	Belongs to the Ves family
PCFPDMBM_00142	6.45e-208	cho	-	-	L	ko:K05984	-	ko00000,ko01000,ko03400	Nuclease subunit of the excinuclease complex
PCFPDMBM_00143	4.16e-194	nadE	6.3.1.5	-	F	ko:K01916	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
PCFPDMBM_00144	1.72e-75	osmE	-	-	J	ko:K04064	-	ko00000	activator of ntr-like gene protein
PCFPDMBM_00145	5.55e-66	chbB	2.7.1.196, 2.7.1.205	-	G	ko:K02760	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar
PCFPDMBM_00146	2.02e-304	celB	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PCFPDMBM_00147	1.18e-66	chbA	2.7.1.196, 2.7.1.205	-	G	ko:K02759	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphotransferase System
PCFPDMBM_00148	6.65e-194	chbR	-	-	K	ko:K03490	-	ko00000,ko03000	transcriptional regulator
PCFPDMBM_00149	0.0	chbF	3.2.1.86	GT4	G	ko:K01222	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Catalyzes the fromation of N-acetyl-D-glucosamine and N-acetyl-D-glucosamine-6-phosphate from diacetylchitobiose-6-phosphate
PCFPDMBM_00150	4.01e-160	chbG	3.5.1.105	-	G	ko:K03478	-	ko00000,ko01000	Involved in the degradation of chitin. ChbG is essential for growth on the acetylated chitooligosaccharides chitobiose and chitotriose but is dispensable for growth on cellobiose and chitosan dimer, the deacetylated form of chitobiose. Deacetylation of chitobiose-6-P and chitotriose-6-P is necessary for both the activation of the chb promoter by the regulatory protein ChbR and the hydrolysis of phosphorylated beta-glucosides by the phospho- beta-glucosidase ChbF. Catalyzes the removal of only one acetyl group from chitobiose-6-P to yield monoacetylchitobiose-6-P, the inducer of ChbR and the substrate of ChbF
PCFPDMBM_00151	0.0	katE	1.11.1.6	-	C	ko:K03781	ko00380,ko00630,ko01110,ko01130,ko01200,ko04011,ko04016,ko04068,ko04146,ko04211,ko04212,ko04213,ko05014,map00380,map00630,map01110,map01130,map01200,map04011,map04016,map04068,map04146,map04211,map04212,map04213,map05014	ko00000,ko00001,ko00002,ko01000	serves to protect cells from the toxic effects of hydrogen peroxide
PCFPDMBM_00152	4.77e-49	cedA	-	-	D	ko:K15722	-	ko00000	Activates the cell division inhibited by chromosomal DNA over-replication
PCFPDMBM_00153	5.71e-289	ydjN	-	-	U	ko:K06956	-	ko00000	Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
PCFPDMBM_00154	8.24e-148	ydjM	-	-	S	ko:K07038	-	ko00000	membrane-bound metal-dependent
PCFPDMBM_00155	6.81e-173	kduD	1.1.1.127	-	IQ	ko:K00065	ko00040,map00040	ko00000,ko00001,ko01000	COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PCFPDMBM_00156	3e-147	yniC	3.1.3.23, 5.4.2.6	-	S	ko:K01838,ko:K19270	ko00500,map00500	ko00000,ko00001,ko01000	HAD-superfamily hydrolase subfamily IA, variant 3
PCFPDMBM_00157	1.37e-110	yniB	-	-	S	-	-	-	Membrane
PCFPDMBM_00158	1.72e-212	yniA	-	-	G	-	-	-	Fructosamine kinase
PCFPDMBM_00159	1.61e-54	ydiZ	-	-	S	-	-	-	endoribonuclease activity
PCFPDMBM_00160	2.4e-206	pfkB	2.7.1.11	-	H	ko:K16370	ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	belongs to the carbohydrate kinase PfkB family
PCFPDMBM_00161	4.02e-171	ydiY	-	-	M	ko:K07283	-	ko00000	Protein of unknown function, DUF481
PCFPDMBM_00162	3.72e-40	-	-	-	-	-	-	-	-
PCFPDMBM_00163	1.82e-14	-	-	-	-	-	-	-	-
PCFPDMBM_00164	0.0	thrS	6.1.1.3	-	J	ko:K01868	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
PCFPDMBM_00165	6.9e-71	infC	-	-	J	ko:K02520	-	ko00000,ko03012,ko03029	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
PCFPDMBM_00166	2.68e-39	rpmI	-	-	J	ko:K02916	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL35 family
PCFPDMBM_00167	2.3e-71	rplT	-	-	J	ko:K02887	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
PCFPDMBM_00168	6.92e-235	pheS	6.1.1.20	-	J	ko:K01889	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
PCFPDMBM_00169	0.0	pheT	6.1.1.20	-	J	ko:K01890	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PCFPDMBM_00170	1.71e-64	himA	-	-	K	ko:K04764	-	ko00000,ko03032,ko03036,ko03400	This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control
PCFPDMBM_00171	2.12e-195	btuC	-	-	H	ko:K06073	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Involved in the translocation of the substrate across the membrane
PCFPDMBM_00173	6.97e-190	gtrB	-	GT2	M	ko:K20534	-	ko00000,ko01000,ko01005,ko02000	Bactoprenol glucosyl transferase
PCFPDMBM_00174	1.53e-114	btuE	1.11.1.9	-	C	ko:K00432	ko00480,ko00590,ko04918,map00480,map00590,map04918	ko00000,ko00001,ko01000	Non-specific peroxidase that can use thioredoxin or glutathione as a reducing agent
PCFPDMBM_00175	4.05e-148	btuD	3.6.3.33	-	P	ko:K06074	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Responsible for energy coupling to the transport system
PCFPDMBM_00176	2.6e-101	nlpC	3.4.17.13	-	M	ko:K13694,ko:K13695	-	ko00000,ko01000,ko01002,ko01011	NlpC/P60 family
PCFPDMBM_00177	8.46e-136	ydiV	-	-	T	-	-	-	Diguanylate phosphodiesterase
PCFPDMBM_00178	0.0	ydiU	-	-	S	ko:K08997	-	ko00000	Belongs to the UPF0061 (SELO) family
PCFPDMBM_00179	2.72e-32	-	-	-	P	-	-	-	Hemin uptake protein
PCFPDMBM_00180	2.09e-251	aroH	2.5.1.54	-	E	ko:K01626	ko00400,ko01100,ko01110,ko01130,ko01230,ko02024,map00400,map01100,map01110,map01130,map01230,map02024	ko00000,ko00001,ko00002,ko01000	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
PCFPDMBM_00181	6.61e-192	ydiA	2.7.11.33, 2.7.4.28	-	S	ko:K09773	-	ko00000,ko01000	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the phosphoenolpyruvate synthase (PEPS) by catalyzing its phosphorylation dephosphorylation
PCFPDMBM_00182	0.0	ppsA	2.7.9.2	-	H	ko:K01007	ko00620,ko00680,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate
PCFPDMBM_00183	0.0	-	-	-	G	ko:K03292	-	ko00000	Symporter
PCFPDMBM_00184	0.0	-	3.2.1.21	GH3	G	ko:K05349	ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110	ko00000,ko00001,ko01000	Fibronectin type III-like domain
PCFPDMBM_00188	2.57e-228	ydiK	-	-	S	-	-	-	ydiK promoter presents a PurR sequence, suggesting that its expression is purine-regulated
PCFPDMBM_00189	0.0	ydiJ	-	-	C	-	-	-	Fad linked oxidase
PCFPDMBM_00190	3.07e-89	menI	3.1.2.28	-	Q	ko:K19222	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the hydrolysis of 1,4-dihydroxy-2-naphthoyl- CoA (DHNA-CoA) to 1,4-dihydroxy-2-naphthoate (DHNA)
PCFPDMBM_00192	2.12e-98	-	-	-	T	-	-	-	Winged helix-turn-helix DNA binding
PCFPDMBM_00193	3.6e-103	-	-	-	T	-	-	-	Winged helix-turn-helix DNA binding
PCFPDMBM_00194	2.6e-77	-	-	-	NU	ko:K07345,ko:K07351	ko05133,map05133	ko00000,ko00001,ko02035,ko02044	Fimbrial protein
PCFPDMBM_00195	4.48e-96	-	-	-	M	ko:K07346	-	ko00000,ko02035,ko02044,ko03110	Pili assembly chaperone PapD, C-terminal domain
PCFPDMBM_00196	0.0	-	-	-	NU	ko:K07347	ko05133,map05133	ko00000,ko00001,ko02000,ko02035,ko02044	Usher protein
PCFPDMBM_00197	3.07e-61	-	-	-	NU	-	-	-	Fimbrial protein
PCFPDMBM_00198	1.21e-59	-	-	-	NU	ko:K07349	-	ko00000,ko02035,ko02044	Fimbrial protein
PCFPDMBM_00199	6.43e-48	-	-	-	K	-	-	-	LuxR family transcriptional regulator
PCFPDMBM_00200	7.04e-77	sufA	-	-	S	ko:K05997,ko:K13628	-	ko00000,ko03016	Iron-sulphur cluster biosynthesis
PCFPDMBM_00201	0.0	sufB	-	-	O	ko:K09014	-	ko00000	FeS assembly protein SufB
PCFPDMBM_00202	4.63e-173	sufC	-	-	O	ko:K09013	-	ko00000,ko02000	FeS assembly ATPase SufC
PCFPDMBM_00203	3.56e-281	sufD	-	-	O	ko:K09015	-	ko00000	FeS assembly protein SufD
PCFPDMBM_00204	2.84e-283	sufS	2.8.1.7, 4.4.1.16	-	E	ko:K01766,ko:K11717	ko00450,ko01100,map00450,map01100	ko00000,ko00001,ko01000	Cysteine desulfurases mobilize the sulfur from L- cysteine to yield L-alanine, an essential step in sulfur metabolism for biosynthesis of a variety of sulfur-containing biomolecules. Component of the suf operon, which is activated and required under specific conditions such as oxidative stress and iron limitation. Acts as a potent selenocysteine lyase in vitro, that mobilizes selenium from L-selenocysteine. Selenocysteine lyase activity is however unsure in vivo
PCFPDMBM_00205	1.45e-88	sufE	-	-	S	ko:K02426	-	ko00000	Participates in cysteine desulfuration mediated by SufS. Cysteine desulfuration mobilizes sulfur from L-cysteine to yield L-alanine and constitutes an essential step in sulfur metabolism for biosynthesis of a variety of sulfur-containing biomolecules. Functions as a sulfur acceptor for SufS, by mediating the direct transfer of the sulfur atom from the S-sulfanylcysteine of SufS, an intermediate product of cysteine desulfuration process
PCFPDMBM_00206	3.79e-213	ycfS	-	-	M	ko:K16291,ko:K19234,ko:K19235,ko:K19236	ko01503,map01503	ko00000,ko00001,ko01002,ko01011	ErfK YbiS YcfS YnhG family protein
PCFPDMBM_00207	3.29e-30	lpp	-	-	M	ko:K06078	-	ko00000,ko01011	major outer membrane lipoprotein
PCFPDMBM_00208	0.0	pykF	2.7.1.40	-	G	ko:K00873	ko00010,ko00230,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko04930,ko05165,ko05203,ko05230,map00010,map00230,map00620,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map04930,map05165,map05203,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Pyruvate kinase
PCFPDMBM_00209	9.03e-233	-	-	-	P	ko:K02071	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
PCFPDMBM_00210	5.34e-141	-	-	-	P	ko:K02072	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	PFAM binding-protein-dependent transport systems inner membrane component
PCFPDMBM_00211	1.57e-191	-	-	-	P	ko:K02073	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the NlpA lipoprotein family
PCFPDMBM_00212	8.05e-41	ydhZ	-	-	S	-	-	-	Protein of unknown function (DUF2767)
PCFPDMBM_00213	3.35e-131	artM5	-	-	P	ko:K02029	-	ko00000,ko00002,ko02000	PFAM binding-protein-dependent transport systems inner membrane component
PCFPDMBM_00214	1.07e-141	yecS_4	-	-	P	ko:K02029	-	ko00000,ko00002,ko02000	polar amino acid ABC transporter, inner membrane subunit
PCFPDMBM_00215	6.11e-146	-	3.6.3.21	-	E	ko:K02028,ko:K02029,ko:K09972,ko:K10004,ko:K10010,ko:K10038	ko02010,ko02020,map02010,map02020	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter
PCFPDMBM_00216	2.09e-166	fliY_2	-	-	ET	ko:K02030	-	ko00000,ko00002,ko02000	belongs to the bacterial solute-binding protein 3 family
PCFPDMBM_00217	1.1e-22	-	-	-	-	-	-	-	-
PCFPDMBM_00218	1.44e-269	fixL	-	-	T	-	-	-	Signal transduction histidine kinase
PCFPDMBM_00219	2.65e-128	fixJ	-	-	K	-	-	-	response regulator
PCFPDMBM_00220	5.34e-97	-	-	-	S	-	-	-	Haem-degrading
PCFPDMBM_00221	9.69e-25	-	-	-	-	-	-	-	-
PCFPDMBM_00222	1.87e-168	ymaE	-	-	S	-	-	-	Metallo-beta-lactamase superfamily
PCFPDMBM_00223	1.06e-146	cynT	4.2.1.1	-	P	ko:K01673	ko00910,map00910	ko00000,ko00001,ko01000	Reversible hydration of carbon dioxide
PCFPDMBM_00224	8.7e-278	-	-	-	G	-	-	-	3-hydroxyanthranilate 3,4-dioxygenase activity
PCFPDMBM_00225	3.9e-172	-	4.1.2.52	-	G	ko:K02510	ko00350,ko01120,map00350,map01120	ko00000,ko00001,ko01000	Belongs to the HpcH HpaI aldolase family
PCFPDMBM_00226	3.53e-125	catD	-	-	E	-	-	-	hydrolases or acyltransferases, alpha beta hydrolase superfamily
PCFPDMBM_00227	1.09e-142	-	-	-	IQ	-	-	-	Enoyl-(Acyl carrier protein) reductase
PCFPDMBM_00228	2.76e-305	-	1.1.1.308	-	E	ko:K15509	-	ko00000,ko01000	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
PCFPDMBM_00229	1.2e-267	-	-	-	EGP	-	-	-	Major Facilitator Superfamily
PCFPDMBM_00230	1.69e-236	-	-	-	K	-	-	-	transcriptional regulator
PCFPDMBM_00231	2.03e-225	-	-	-	S	-	-	-	SnoaL-like polyketide cyclase
PCFPDMBM_00232	9.16e-289	-	-	-	S	-	-	-	SnoaL-like polyketide cyclase
PCFPDMBM_00233	7.37e-292	-	1.1.1.23, 1.1.1.308	-	E	ko:K00013,ko:K15509	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
PCFPDMBM_00234	2.27e-231	-	-	-	J	-	-	-	Belongs to the amidase family
PCFPDMBM_00235	0.0	ydhS	-	-	S	-	-	-	FAD-NAD(P)-binding
PCFPDMBM_00238	5.21e-297	mdtK	-	-	P	ko:K03327	-	ko00000,ko02000	Multidrug efflux pump that functions probably as a Na( ) drug antiporter
PCFPDMBM_00239	2.41e-149	ribE	2.5.1.9	-	H	ko:K00793	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Riboflavin synthase
PCFPDMBM_00240	4.17e-282	cfa	2.1.1.79	-	M	ko:K00574	-	ko00000,ko01000	synthase
PCFPDMBM_00241	2.03e-256	ydhC	-	-	EGP	-	-	-	Major facilitator superfamily
PCFPDMBM_00242	2.19e-224	ydhB	-	-	K	-	-	-	Transcriptional regulator
PCFPDMBM_00243	1.04e-243	purR	-	-	K	ko:K02529,ko:K03604	-	ko00000,ko03000	Is the main repressor of the genes involved in the de novo synthesis of purine nucleotides, regulating purB, purC, purEK, purF, purHD, purL, purMN and guaBA expression. PurR is allosterically activated to bind its cognate DNA by binding the purine corepressors, hypoxanthine or guanine, thereby effecting transcription repression
PCFPDMBM_00244	2.49e-08	-	-	-	-	-	-	-	-
PCFPDMBM_00245	1.35e-249	ydhP	-	-	EGP	ko:K18567,ko:K19577	-	ko00000,ko02000	Major Facilitator
PCFPDMBM_00246	7.03e-134	sodB	1.15.1.1	-	C	ko:K04564	ko04013,ko04068,ko04146,ko04211,ko04212,ko04213,ko05016,map04013,map04068,map04146,map04211,map04212,map04213,map05016	ko00000,ko00001,ko01000	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
PCFPDMBM_00247	2.84e-137	ydhO	3.2.1.14	GH18	M	ko:K01183,ko:K19303	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000,ko01002,ko01011	COG0791 Cell wall-associated hydrolases (invasion-associated proteins)
PCFPDMBM_00248	1.52e-79	grxD	-	-	C	ko:K07390	-	ko00000,ko03029,ko03110	Belongs to the glutaredoxin family. Monothiol subfamily
PCFPDMBM_00249	1.84e-154	rnt	-	-	L	ko:K03683	-	ko00000,ko01000,ko03016	Trims short 3' overhangs of a variety of RNA species, leaving a one or two nucleotide 3' overhang. Responsible for the end-turnover of tRNA specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A). Also appears to be involved in tRNA biosynthesis
PCFPDMBM_00250	5.12e-92	gloA	4.4.1.5	-	H	ko:K01759	ko00620,map00620	ko00000,ko00001,ko01000	Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione
PCFPDMBM_00251	7.75e-258	nemA	-	-	C	ko:K10680	ko00633,ko01120,map00633,map01120	ko00000,ko00001,ko01000	nadh flavin
PCFPDMBM_00252	1.32e-115	nemR	-	-	K	ko:K16137	-	ko00000,ko03000	transcriptional regulator
PCFPDMBM_00253	0.0	eptA	2.7.8.42, 2.7.8.43	-	S	ko:K03760,ko:K12975,ko:K19353	ko00540,ko01503,map00540,map01503	ko00000,ko00001,ko00002,ko01000,ko01005	membrane-associated metal-dependent hydrolase
PCFPDMBM_00254	1.92e-206	ydhF	-	-	S	-	-	-	Aldo Keto reductase
PCFPDMBM_00255	3.44e-117	sodC	1.15.1.1	-	P	ko:K04565	ko04146,ko04213,ko05014,ko05016,ko05020,map04146,map04213,map05014,map05016,map05020	ko00000,ko00001,ko01000	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
PCFPDMBM_00256	1.79e-191	ydhK	-	-	S	ko:K03468	-	ko00000,ko02000	Fusaric acid resistance protein
PCFPDMBM_00257	3.01e-246	ydhK	-	-	S	ko:K03468	-	ko00000,ko02000	Fusaric acid resistance
PCFPDMBM_00258	1.65e-166	ydhJ	-	-	V	-	-	-	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PCFPDMBM_00259	1.24e-43	ydhI	-	-	S	-	-	-	Membrane
PCFPDMBM_00260	3.5e-92	slyA	-	-	K	ko:K06075	-	ko00000,ko03000	Transcription regulator that can specifically activate or repress expression of target genes
PCFPDMBM_00261	2.32e-241	-	-	-	T	-	-	-	Diguanylate cyclase
PCFPDMBM_00262	1.2e-70	slyB	-	-	M	ko:K06077	-	ko00000	Outer Membrane Lipoprotein
PCFPDMBM_00263	2.46e-270	anmK	2.7.1.170	-	F	ko:K09001	-	ko00000,ko01000	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
PCFPDMBM_00264	2.07e-71	mliC	-	-	S	-	-	-	membrane-bound lysozyme inhibitor of c-type lysozyme
PCFPDMBM_00265	2.29e-157	pdxH	1.4.3.5	-	H	ko:K00275	ko00750,ko01100,ko01120,map00750,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP)
PCFPDMBM_00266	4.57e-305	tyrS	6.1.1.1	-	J	ko:K01866	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
PCFPDMBM_00267	3.3e-201	pdxY	2.7.1.35	-	H	ko:K00868	ko00750,ko01100,map00750,map01100	ko00000,ko00001,ko01000	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
PCFPDMBM_00268	8.47e-139	gst	2.5.1.18	-	O	ko:K00799	ko00480,ko00980,ko00982,ko00983,ko01524,ko05200,ko05204,ko05225,ko05418,map00480,map00980,map00982,map00983,map01524,map05200,map05204,map05225,map05418	ko00000,ko00001,ko01000,ko02000	Belongs to the GST superfamily
PCFPDMBM_00269	0.0	dtpA	-	-	U	ko:K03305	-	ko00000	Proton-dependent permease that transports di- and tripeptides
PCFPDMBM_00270	6.68e-150	nth	4.2.99.18	-	L	ko:K10773	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
PCFPDMBM_00271	1.93e-146	rnfE	-	-	C	ko:K03613	-	ko00000	Part of a membrane complex involved in electron transport
PCFPDMBM_00272	1.97e-131	rnfG	-	-	C	ko:K03612	-	ko00000	Part of a membrane complex involved in electron transport
PCFPDMBM_00273	1.37e-248	rnfD	-	-	C	ko:K03614	-	ko00000	Part of a membrane complex involved in electron transport
PCFPDMBM_00274	0.0	rnfC	-	-	C	ko:K03615	-	ko00000	Part of a membrane complex involved in electron transport
PCFPDMBM_00275	5.3e-124	rnfB	-	-	C	ko:K03616	-	ko00000	Part of a membrane complex involved in electron transport
PCFPDMBM_00276	1.35e-122	rnfA	-	-	C	ko:K03617	-	ko00000	Part of a membrane complex involved in electron transport
PCFPDMBM_00277	5.55e-90	ydgK	-	-	S	-	-	-	Membrane
PCFPDMBM_00278	3.73e-44	cnu	-	-	S	-	-	-	expression modulating family protein
PCFPDMBM_00279	1.7e-29	blr	-	-	-	-	-	-	-
PCFPDMBM_00280	3.4e-256	ydgJ	1.1.1.371	-	S	ko:K16044	ko00562,ko01120,map00562,map01120	ko00000,ko00001,ko01000	oxidoreductase
PCFPDMBM_00281	7.98e-228	add	3.5.4.4	-	F	ko:K01488	ko00230,ko01100,ko05340,map00230,map01100,map05340	ko00000,ko00001,ko01000	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
PCFPDMBM_00282	3.2e-265	malY	4.4.1.8	-	E	ko:K14155	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko01000,ko01007	Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities
PCFPDMBM_00283	0.0	malX	2.7.1.199, 2.7.1.208	-	G	ko:K02790,ko:K02791	ko00010,ko00500,ko00520,ko02060,map00010,map00500,map00520,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system
PCFPDMBM_00284	5.84e-230	malI	-	-	K	ko:K16136	-	ko00000,ko03000	Periplasmic binding protein LacI transcriptional regulator
PCFPDMBM_00285	2.73e-113	-	-	-	K	-	-	-	LysR substrate binding domain
PCFPDMBM_00286	8.58e-141	ytnP	-	-	S	-	-	-	Metallo-beta-lactamase superfamily
PCFPDMBM_00287	1.18e-181	-	-	-	S	-	-	-	alpha/beta hydrolase fold
PCFPDMBM_00288	0.0	ydgA	-	-	S	-	-	-	protein conserved in bacteria
PCFPDMBM_00289	9.54e-265	manA	5.3.1.8	-	G	ko:K01809	ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the mannose-6-phosphate isomerase type 1 family
PCFPDMBM_00290	0.0	fumA	4.2.1.2	-	C	ko:K01676	ko00020,ko00620,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00620,map00720,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible hydration of fumarate to (S)- malate
PCFPDMBM_00291	0.0	fumC	4.2.1.2	-	C	ko:K01679	ko00020,ko00620,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko04934,ko05200,ko05211,map00020,map00620,map00720,map01100,map01110,map01120,map01130,map01200,map04934,map05200,map05211	ko00000,ko00001,ko00002,ko01000	Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
PCFPDMBM_00292	1.12e-215	tus	-	-	L	ko:K10748	-	ko00000,ko03032	Trans-acting protein required for termination of DNA replication. Binds to DNA replication terminator sequences (terA to terF) to prevent the passage of replication forks. The termination efficiency will be affected by the affinity of this protein for the terminator sequence
PCFPDMBM_00293	6.16e-298	rstB	2.7.13.3	-	T	ko:K07639	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
PCFPDMBM_00294	1.07e-150	fhuC	3.6.3.34	-	HP	ko:K02013	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	COG1120 ABC-type cobalamin Fe3 -siderophores transport systems, ATPase components
PCFPDMBM_00295	1.99e-197	-	-	-	U	ko:K02015	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PCFPDMBM_00296	5.32e-208	-	-	-	P	ko:K02016	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
PCFPDMBM_00297	2.71e-161	rstA	-	-	K	ko:K07661	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PCFPDMBM_00298	4.27e-66	ydgC	-	-	S	ko:K02442	-	ko00000	GlpM family
PCFPDMBM_00299	1.67e-162	folM	1.5.1.3, 1.5.1.33, 1.5.1.50	-	IQ	ko:K03793,ko:K13938	ko00670,ko00790,ko01100,map00670,map00790,map01100	ko00000,ko00001,ko01000	reductase
PCFPDMBM_00300	5e-309	ydgI	-	-	E	ko:K03757,ko:K03758	-	ko00000,ko02000	Arginine ornithine antiporter
PCFPDMBM_00301	1.54e-201	ydgH	-	-	S	-	-	-	Protein of unknown function (DUF1471)
PCFPDMBM_00302	0.0	pntA	1.6.1.2	-	C	ko:K00324	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
PCFPDMBM_00303	3.33e-315	pntB	1.6.1.2	-	C	ko:K00325	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
PCFPDMBM_00304	1.06e-242	ynaI	-	-	M	ko:K16052	-	ko00000,ko02000	mechanosensitive ion channel
PCFPDMBM_00305	2.49e-229	uspE	-	-	T	ko:K14055	-	ko00000	universal stress protein
PCFPDMBM_00306	1.02e-177	fnr	-	-	K	ko:K01420	-	ko00000,ko03000	COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
PCFPDMBM_00307	1.2e-121	ogt	2.1.1.63	-	L	ko:K00567	-	ko00000,ko01000,ko03400	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
PCFPDMBM_00308	0.0	abgT	-	-	H	ko:K12942	-	ko00000	AbgT putative transporter family
PCFPDMBM_00309	0.0	abgB	-	-	S	ko:K12941	-	ko00000,ko01002	amidohydrolase
PCFPDMBM_00310	7.71e-294	abgA	-	-	S	ko:K12940	-	ko00000,ko01002	Protein involved in hydrolase activity and metabolic process
PCFPDMBM_00311	2.68e-199	abgR	-	-	K	ko:K14057	-	ko00000,ko03000	transcriptional regulator
PCFPDMBM_00312	1.16e-120	ydaL	-	-	S	-	-	-	protein conserved in bacteria
PCFPDMBM_00313	3.13e-182	-	1.6.5.5	-	C	ko:K00344	-	ko00000,ko01000	alcohol dehydrogenase
PCFPDMBM_00314	4.01e-181	tqsA	-	-	T	ko:K11744	-	ko00000	permease
PCFPDMBM_00315	4.39e-61	mdtJ	-	-	P	ko:K11743	-	ko00000,ko00002,ko02000	Catalyzes the excretion of spermidine
PCFPDMBM_00316	1.83e-66	mdtI	-	-	P	ko:K11742	-	ko00000,ko00002,ko02000	Catalyzes the excretion of spermidine
PCFPDMBM_00317	0.0	-	-	-	T	-	-	-	Diguanylate cyclase
PCFPDMBM_00318	3.2e-179	ydgD	-	-	M	ko:K04775	-	ko00000,ko01000,ko01002	Belongs to the peptidase S1B family
PCFPDMBM_00319	1.75e-06	asr	-	-	S	-	-	-	Required for growth and or survival at acidic conditions
PCFPDMBM_00320	0.0	mcar-1	3.4.17.19	-	E	ko:K01299	-	ko00000,ko01000,ko01002	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
PCFPDMBM_00321	3.87e-282	ynfM	-	-	EGP	ko:K08224	-	ko00000,ko02000	Major facilitator superfamily
PCFPDMBM_00322	6.09e-199	ynfL	-	-	K	-	-	-	transcriptional regulator
PCFPDMBM_00323	7.79e-281	mlc	-	-	GK	ko:K15545	-	ko00000,ko03000	Mlc, controls the expression of genes involved in the phosphotransferase and phosphoenolpyruvate systems, regulates genes involved in the uptake of sugars
PCFPDMBM_00324	5.19e-157	ynfK	6.3.3.3	-	H	ko:K01935	ko00780,ko01100,map00780,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
PCFPDMBM_00325	3.12e-277	clcB	-	-	P	ko:K03281	-	ko00000	Voltage gated chloride channel
PCFPDMBM_00326	6.52e-270	opuBA	-	-	E	ko:K05847	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	abc transporter atp-binding protein
PCFPDMBM_00327	3e-139	opuCB	-	-	P	ko:K05846	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	transport
PCFPDMBM_00328	2.07e-206	opuCC	-	-	M	ko:K05845	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Glycine betaine
PCFPDMBM_00329	9.94e-153	opuCB2	-	-	P	ko:K05846	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PCFPDMBM_00330	1.96e-151	-	-	-	S	-	-	-	Protein of unknown function (DUF1275)
PCFPDMBM_00331	9.51e-148	yliJ	2.5.1.18	-	O	ko:K00799	ko00480,ko00980,ko00982,ko00983,ko01524,ko05200,ko05204,ko05225,ko05418,map00480,map00980,map00982,map00983,map01524,map05200,map05204,map05225,map05418	ko00000,ko00001,ko01000,ko02000	Glutathione S-Transferase
PCFPDMBM_00332	8.8e-169	-	-	-	K	-	-	-	DJ-1/PfpI family
PCFPDMBM_00333	1.53e-131	-	-	-	S	-	-	-	Phosphohydrolase
PCFPDMBM_00334	1.4e-173	-	-	-	K	-	-	-	Transcriptional regulator
PCFPDMBM_00335	1.07e-188	-	-	-	K	-	-	-	Transcriptional regulator
PCFPDMBM_00336	9.36e-203	-	-	-	S	ko:K06889	-	ko00000	Dienelactone hydrolase family
PCFPDMBM_00337	3.22e-151	ucpA	-	-	IQ	ko:K18335	ko00051,ko01120,map00051,map01120	ko00000,ko00001,ko01000	oxidoreductase activity
PCFPDMBM_00339	1.29e-36	-	-	-	-	-	-	-	-
PCFPDMBM_00340	3.28e-270	-	1.8.1.4	-	C	ko:K00382,ko:K21739	ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000,ko04147	E3 component of pyruvate and 2-oxoglutarate dehydrogenase complex
PCFPDMBM_00341	1.37e-180	tp53I3	-	-	C	-	-	-	Alcohol dehydrogenase zinc-binding domain protein
PCFPDMBM_00342	7.4e-202	cinB	-	-	I	-	-	-	Alpha beta hydrolase
PCFPDMBM_00343	1.54e-166	-	-	-	S	ko:K07124	-	ko00000	Belongs to the short-chain dehydrogenases reductases (SDR) family
PCFPDMBM_00344	1.54e-189	-	-	-	K	-	-	-	DJ-1/PfpI family
PCFPDMBM_00345	4.45e-215	opdE	-	-	EGP	ko:K03445	-	ko00000,ko02000	Major facilitator superfamily
PCFPDMBM_00346	8.21e-245	-	-	-	S	ko:K06889	-	ko00000	X-Pro dipeptidyl-peptidase (S15 family)
PCFPDMBM_00347	1.8e-193	-	-	-	K	-	-	-	LysR substrate binding domain
PCFPDMBM_00348	1.89e-70	-	-	-	-	-	-	-	-
PCFPDMBM_00349	1.57e-83	-	-	-	S	-	-	-	membrane
PCFPDMBM_00350	8.28e-47	msgA	-	-	S	-	-	-	DinI-like family
PCFPDMBM_00351	1.34e-119	-	-	-	M	-	-	-	Phosphotransferase enzyme family
PCFPDMBM_00352	0.0	iutA	-	-	H	ko:K02014	-	ko00000,ko02000	Receptor
PCFPDMBM_00353	7.5e-230	-	-	-	EGP	ko:K19577	-	ko00000,ko02000	Major Facilitator Superfamily
PCFPDMBM_00354	5.75e-165	-	-	-	M	ko:K14189	-	ko00000,ko01000	Belongs to the short-chain dehydrogenases reductases (SDR) family
PCFPDMBM_00355	8.89e-06	-	-	-	S	ko:K07124	-	ko00000	Belongs to the short-chain dehydrogenases reductases (SDR) family
PCFPDMBM_00356	3.65e-202	-	-	-	K	-	-	-	DJ-1/PfpI family
PCFPDMBM_00358	6.86e-209	-	-	-	K	-	-	-	LysR family transcriptional regulator
PCFPDMBM_00360	5.98e-105	-	-	-	S	-	-	-	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
PCFPDMBM_00361	9.32e-89	-	-	-	S	ko:K08995	-	ko00000	Domain of unknown function (DUF4142)
PCFPDMBM_00362	3.87e-240	-	-	-	P	ko:K02051	-	ko00000,ko00002,ko02000	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems, periplasmic components
PCFPDMBM_00363	5.12e-177	tauC	-	-	P	ko:K02050	-	ko00000,ko00002,ko02000	ABC-type nitrate sulfonate bicarbonate transport system permease component
PCFPDMBM_00364	1.81e-175	cysA_3	-	-	P	ko:K02049	-	ko00000,ko00002,ko02000	ABC-type nitrate sulfonate bicarbonate transport system ATPase component
PCFPDMBM_00365	5.18e-162	IV02_09290	-	-	P	ko:K09967	-	ko00000	Urea carboxylase-associated protein 2
PCFPDMBM_00366	9.52e-154	ycgI	-	-	S	ko:K09967	-	ko00000	urea carboxylase-associated protein 1
PCFPDMBM_00367	0.0	uca	6.3.4.6	-	EI	ko:K01941	ko00220,ko00791,ko01100,map00220,map00791,map01100	ko00000,ko00001,ko01000	Biotin carboxylase
PCFPDMBM_00368	0.0	atzF	3.5.1.54	-	J	ko:K01457	ko00220,ko00791,ko01100,ko01120,map00220,map00791,map01100,map01120	ko00000,ko00001,ko01000	Allophanate hydrolase
PCFPDMBM_00369	6.62e-126	dmsD	-	-	S	-	-	-	Required for biogenesis assembly of DMSO reductase, but not for the interaction of the DmsA signal peptide with the Tat system. May be part of a chaperone cascade complex that facilitates a folding-maturation pathway for the substrate protein
PCFPDMBM_00370	0.0	ynfE	1.8.5.3, 1.97.1.9	-	C	ko:K07306,ko:K07309,ko:K08351	ko00450,ko00780,ko00920,ko01100,map00450,map00780,map00920,map01100	ko00000,ko00001,ko01000,ko02000	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
PCFPDMBM_00371	1.06e-68	ynfD	-	-	S	-	-	-	membrane
PCFPDMBM_00372	1.46e-143	ynfC	-	-	M	-	-	-	UPF0257 lipoprotein
PCFPDMBM_00373	6.23e-65	ynfB	-	-	S	-	-	-	Belongs to the UPF0482 family
PCFPDMBM_00374	6.77e-69	ynfA	-	-	S	ko:K09771	-	ko00000,ko02000	UPF0060 membrane protein
PCFPDMBM_00375	1.53e-311	rspA	4.2.1.8	-	M	ko:K08323	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the mandelate racemase muconate lactonizing enzyme family
PCFPDMBM_00376	2.78e-228	rspB	1.1.1.380	-	C	ko:K08322	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko01000	Dehydrogenase
PCFPDMBM_00377	2.79e-312	intR	-	-	L	ko:K14059	-	ko00000	Belongs to the 'phage' integrase family
PCFPDMBM_00378	5.2e-54	-	-	-	S	-	-	-	Putative excisionase (DUF1233)
PCFPDMBM_00379	7.07e-48	-	-	-	S	-	-	-	Protein involved in biological_process
PCFPDMBM_00380	2.02e-30	-	-	-	-	-	-	-	-
PCFPDMBM_00381	1.55e-49	-	-	-	-	-	-	-	-
PCFPDMBM_00382	6.65e-258	STY2074	-	-	S	-	-	-	RecT family
PCFPDMBM_00383	0.0	recE	-	-	L	ko:K10906	-	ko00000,ko01000,ko03400	Enterobacterial exodeoxyribonuclease VIII
PCFPDMBM_00384	4.69e-26	-	-	-	-	-	-	-	-
PCFPDMBM_00385	8.08e-40	-	-	-	-	-	-	-	-
PCFPDMBM_00387	2.13e-09	-	-	-	-	-	-	-	-
PCFPDMBM_00388	4.06e-85	-	-	-	K	-	-	-	Helix-turn-helix
PCFPDMBM_00389	9.82e-45	-	-	-	S	-	-	-	Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT
PCFPDMBM_00390	3.47e-108	-	-	-	S	-	-	-	Putative bacterial toxin ydaT
PCFPDMBM_00391	3.2e-158	ydaU	-	-	S	-	-	-	Protein involved in DNA replication initiation, regulation of DNA replication, viral process and DNA replication
PCFPDMBM_00392	9.86e-160	dnaC	-	-	L	ko:K02315,ko:K10762	-	ko00000,ko03032	DNA replication protein
PCFPDMBM_00393	4.88e-54	-	-	-	GK	-	-	-	Bacterial protein of unknown function (DUF977)
PCFPDMBM_00394	8.83e-31	-	-	-	-	-	-	-	-
PCFPDMBM_00396	6.36e-11	-	-	-	Q	-	-	-	methyltransferase
PCFPDMBM_00397	6.05e-79	-	-	-	V	-	-	-	HNH endonuclease
PCFPDMBM_00400	1.29e-127	-	-	-	S	-	-	-	Protein of unknown function (DUF1367)
PCFPDMBM_00401	3.48e-30	-	-	-	-	-	-	-	-
PCFPDMBM_00402	8.17e-55	-	-	-	-	-	-	-	-
PCFPDMBM_00403	9.3e-73	-	-	-	V	-	-	-	NinG protein
PCFPDMBM_00404	6.59e-23	ylcG	-	-	-	-	-	-	-
PCFPDMBM_00405	2.74e-179	-	-	-	O	-	-	-	Antitermination protein
PCFPDMBM_00406	1.38e-37	-	-	-	-	-	-	-	-
PCFPDMBM_00408	2.12e-40	essD	-	-	S	-	-	-	Bacteriophage P21 holin S
PCFPDMBM_00409	4.53e-106	-	-	-	S	-	-	-	Phage lysozyme
PCFPDMBM_00410	5.71e-64	-	-	-	-	ko:K14744	-	ko00000,ko01000	-
PCFPDMBM_00411	1.11e-29	-	-	-	-	-	-	-	-
PCFPDMBM_00412	5.31e-123	-	-	-	L	ko:K07474	-	ko00000	terminase, small subunit
PCFPDMBM_00413	0.0	-	-	-	S	-	-	-	phage Terminase large subunit
PCFPDMBM_00414	0.0	-	-	-	S	-	-	-	Domain of unknown function (DUF4055)
PCFPDMBM_00415	3.19e-263	-	-	-	S	-	-	-	Head morphogenesis protein
PCFPDMBM_00417	5.24e-174	-	-	-	-	-	-	-	-
PCFPDMBM_00418	2.43e-263	-	-	-	S	-	-	-	P22 coat protein - gene protein 5
PCFPDMBM_00419	1.76e-32	-	-	-	-	-	-	-	-
PCFPDMBM_00420	1.32e-106	-	-	-	-	-	-	-	-
PCFPDMBM_00421	4.32e-71	-	-	-	-	-	-	-	-
PCFPDMBM_00422	3.18e-133	-	-	-	-	-	-	-	-
PCFPDMBM_00423	5.34e-97	-	-	-	S	-	-	-	Bacteriophage related domain of unknown function
PCFPDMBM_00424	9.77e-206	-	-	-	N	-	-	-	Phage tail tube protein, TTP
PCFPDMBM_00425	7.93e-67	-	-	-	S	-	-	-	Phage tail assembly chaperone
PCFPDMBM_00426	2.04e-61	-	-	-	S	-	-	-	Phage related hypothetical protein (DUF1799)
PCFPDMBM_00427	0.0	-	-	-	D	-	-	-	tail length tape measure
PCFPDMBM_00429	3.86e-69	-	-	-	S	-	-	-	minor tail family protein
PCFPDMBM_00430	9.33e-177	-	-	-	S	-	-	-	Phage minor tail protein L
PCFPDMBM_00431	4.82e-178	-	-	-	M	-	-	-	NLP P60 protein
PCFPDMBM_00432	3.83e-125	-	-	-	S	-	-	-	virus tail assembly
PCFPDMBM_00433	0.0	-	-	-	NT	-	-	-	Phage-related protein, tail component
PCFPDMBM_00434	1.47e-73	-	-	-	NT	ko:K02067,ko:K03406	ko02010,ko02020,ko02030,map02010,map02020,map02030	ko00000,ko00001,ko00002,ko02000,ko02035	transmembrane signaling receptor activity
PCFPDMBM_00436	9.57e-48	-	-	-	S	-	-	-	peptidoglycan catabolic process
PCFPDMBM_00437	9e-33	-	-	-	-	-	-	-	-
PCFPDMBM_00438	7.3e-62	-	-	-	-	ko:K03503	-	ko00000,ko01000,ko01002,ko03400	-
PCFPDMBM_00441	3.14e-279	ydfJ	-	-	EGP	ko:K08173	-	ko00000,ko02000	Major facilitator superfamily
PCFPDMBM_00442	8.68e-307	-	-	-	G	ko:K16210	-	ko00000,ko02000	MFS/sugar transport protein
PCFPDMBM_00443	2.56e-316	ydfI	1.1.1.57	-	G	ko:K00040	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the mannitol dehydrogenase family
PCFPDMBM_00444	2.2e-152	ydfH	-	-	K	ko:K22293	-	ko00000,ko03000	transcriptional regulator
PCFPDMBM_00445	4.83e-175	ydfG	1.1.1.381	-	S	ko:K16066	ko00240,ko00260,ko01100,map00240,map00260,map01100	ko00000,ko00001,ko01000	Belongs to the short-chain dehydrogenases reductases (SDR) family
PCFPDMBM_00446	0.0	dcp	3.4.15.5	-	E	ko:K01284	-	ko00000,ko01000,ko01002	PFAM peptidase M3A and M3B, thimet oligopeptidase F
PCFPDMBM_00447	1.34e-24	intE	-	-	L	-	-	-	Belongs to the 'phage' integrase family
PCFPDMBM_00449	1.72e-63	-	-	-	-	-	-	-	-
PCFPDMBM_00450	1.86e-266	yxjG	2.1.1.14	-	E	ko:K00549	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	methionine synthase
PCFPDMBM_00451	6e-305	urtA	-	-	E	ko:K11959	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component
PCFPDMBM_00452	0.0	urtB	-	-	E	ko:K11960	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
PCFPDMBM_00453	1.2e-241	urtC	-	-	E	ko:K01998,ko:K11961	ko02010,ko02024,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
PCFPDMBM_00454	7.06e-176	urtD	-	-	E	ko:K11962	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	abc transporter atp-binding protein
PCFPDMBM_00455	5.61e-157	urtE	-	-	E	ko:K11963	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter ATP-binding protein
PCFPDMBM_00456	6.14e-147	zinT	-	-	S	ko:K09815	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	periplasmic or secreted protein
PCFPDMBM_00457	2.73e-265	ydeE	-	-	EGP	-	-	-	Major facilitator superfamily
PCFPDMBM_00458	2.22e-185	eamA	-	-	EG	ko:K03298,ko:K15268	-	ko00000,ko02000	of the drug metabolite transporter (DMT) superfamily
PCFPDMBM_00459	4.07e-39	marB	-	-	S	ko:K13630	-	ko00000	Multiple antibiotic resistance
PCFPDMBM_00460	1.13e-87	marA	-	-	K	ko:K05804,ko:K13632	ko01503,map01503	ko00000,ko00001,ko00002,ko01504,ko03000,ko03036	Transcriptional activator of genes involved in the multiple antibiotic resistance (Mar) phenotype
PCFPDMBM_00461	3.12e-95	marR	-	-	K	ko:K03712	-	ko00000,ko03000	transcriptional regulator
PCFPDMBM_00462	8.39e-133	marC	-	-	U	ko:K05595	-	ko00000,ko02000	UPF0056 membrane protein
PCFPDMBM_00463	1.8e-243	sotB	-	-	EGP	ko:K03445,ko:K08159	-	ko00000,ko02000	Involved in the efflux of sugars. The physiological role may be the reduction of the intracellular concentration of toxic sugars or sugar metabolites
PCFPDMBM_00464	1.42e-174	-	-	-	S	-	-	-	Phenazine biosynthesis-like protein
PCFPDMBM_00465	1.1e-184	yddE_1	-	-	S	-	-	-	phenazine biosynthesis protein PhzF
PCFPDMBM_00466	1.1e-125	-	-	-	S	-	-	-	protein conserved in bacteria
PCFPDMBM_00467	1.24e-136	-	-	-	IQ	-	-	-	Short-chain dehydrogenase reductase Sdr
PCFPDMBM_00468	1.48e-92	yjgK	-	-	G	-	-	-	PFAM conserved
PCFPDMBM_00469	5.68e-279	-	-	-	G	-	-	-	BNR repeat-like domain
PCFPDMBM_00470	0.0	-	-	-	E	ko:K03307	-	ko00000	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
PCFPDMBM_00471	1.04e-192	-	4.3.3.7	-	EM	ko:K01714	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the DapA family
PCFPDMBM_00472	7.3e-258	dhaT	-	-	C	ko:K19954	-	ko00000,ko01000	alcohol dehydrogenase
PCFPDMBM_00473	2.73e-242	ygbK	2.7.1.219, 2.7.1.220	-	G	ko:K22129	-	ko00000,ko01000	type III effector
PCFPDMBM_00474	5.65e-230	pdxA2	1.1.1.408, 1.1.1.409	-	H	ko:K22024	-	ko00000,ko01000	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
PCFPDMBM_00475	1.39e-165	ygbI	-	-	K	-	-	-	transcriptional regulator
PCFPDMBM_00476	3.63e-219	ldh	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	Belongs to the LDH MDH superfamily
PCFPDMBM_00477	2.18e-96	ysnE	-	-	K	ko:K03829	-	ko00000,ko01000	COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PCFPDMBM_00478	1.91e-203	yneJ	-	-	K	-	-	-	Transcriptional regulator
PCFPDMBM_00479	3.85e-313	yneI	1.2.1.16, 1.2.1.20, 1.2.1.24, 1.2.1.79	-	C	ko:K00135,ko:K08324	ko00250,ko00310,ko00350,ko00650,ko00760,ko01100,ko01120,map00250,map00310,map00350,map00650,map00760,map01100,map01120	ko00000,ko00001,ko00002,ko01000	belongs to the aldehyde dehydrogenase family
PCFPDMBM_00480	0.0	cheD_2	-	-	NT	ko:K05874	ko02020,ko02030,map02020,map02030	ko00000,ko00001,ko02035	Chemotaxis
PCFPDMBM_00481	8.74e-208	glsA	3.5.1.2	-	E	ko:K01425	ko00220,ko00250,ko00471,ko01100,ko04724,ko04727,ko04964,ko05206,ko05230,map00220,map00250,map00471,map01100,map04724,map04727,map04964,map05206,map05230	ko00000,ko00001,ko01000	Belongs to the glutaminase family
PCFPDMBM_00482	8.96e-280	yneF	2.7.7.65	-	T	ko:K21020	ko02025,map02025	ko00000,ko00001,ko01000	Diguanylate cyclase
PCFPDMBM_00483	3.26e-197	adrA	2.7.7.65	-	T	ko:K18968	ko02026,map02026	ko00000,ko00001,ko01000,ko02000	Diguanylate cyclase
PCFPDMBM_00484	6.12e-200	-	-	-	T	-	-	-	Diguanylate cyclase
PCFPDMBM_00485	0.0	uxaB	1.1.1.57, 1.1.1.58	-	G	ko:K00040,ko:K00041	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the mannitol dehydrogenase family. UxaB subfamily
PCFPDMBM_00486	3.58e-206	yneE	-	-	S	ko:K08994	-	ko00000,ko02000	Membrane
PCFPDMBM_00487	3.69e-232	-	-	-	S	-	-	-	Alpha beta hydrolase
PCFPDMBM_00488	8.97e-170	ompR	-	-	K	ko:K02483	-	ko00000,ko02022	Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PCFPDMBM_00489	6.35e-280	-	-	-	T	-	-	-	phosphorelay sensor kinase activity and signal transduction
PCFPDMBM_00491	8.24e-255	dipZ	-	-	CO	-	-	-	cytochrome c biogenesis protein
PCFPDMBM_00492	1.22e-170	tam	2.1.1.144	-	S	ko:K00598	-	ko00000,ko01000	Catalyzes the S-adenosylmethionine monomethyl esterification of trans-aconitate
PCFPDMBM_00493	1.51e-124	nudK_2	3.6.1.13	-	L	ko:K01515	ko00230,map00230	ko00000,ko00001,ko01000	Nudix-type nucleoside diphosphatase, YffH AdpP family
PCFPDMBM_00494	7.33e-151	-	-	-	K	-	-	-	transcriptional regulator
PCFPDMBM_00495	6.58e-66	-	-	-	-	-	-	-	-
PCFPDMBM_00496	4.25e-58	bigR	-	-	K	-	-	-	transcriptional regulator
PCFPDMBM_00497	3.36e-85	-	-	-	E	ko:K07112	-	ko00000	transporter component
PCFPDMBM_00498	9.79e-75	-	-	-	S	ko:K07112	-	ko00000	Transporter Component
PCFPDMBM_00499	1.79e-129	grxB	-	-	O	ko:K03675	-	ko00000,ko03110	Glutaredoxin 2
PCFPDMBM_00500	9.21e-56	yebG	-	-	S	ko:K09918	-	ko00000	YebG family
PCFPDMBM_00502	1.32e-132	cat	2.3.1.28	-	V	ko:K19271	-	br01600,ko00000,ko01000,ko01504	This enzyme is an effector of chloramphenicol resistance in bacteria
PCFPDMBM_00503	2.79e-193	-	-	-	T	-	-	-	Diguanylate cyclase
PCFPDMBM_00504	5.74e-156	-	-	-	I	-	-	-	Alpha/beta hydrolase family
PCFPDMBM_00505	9.11e-197	cpo	1.11.1.10	-	I	ko:K00433	-	ko00000,ko01000	Serine aminopeptidase, S33
PCFPDMBM_00506	1.87e-66	ohrR	-	-	K	-	-	-	transcription factor activity and regulation of transcription
PCFPDMBM_00507	3.55e-49	-	-	-	L	-	-	-	2OG-Fe(II) oxygenase superfamily
PCFPDMBM_00508	0.0	-	-	-	L	ko:K03701	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
PCFPDMBM_00509	2.02e-91	-	-	-	K	-	-	-	transcriptional regulator
PCFPDMBM_00510	1.23e-29	ykkD	-	-	P	ko:K11741,ko:K18925	-	ko00000,ko00002,ko02000	Multidrug Resistance protein
PCFPDMBM_00511	2.89e-35	ykkC	-	-	P	ko:K11741,ko:K18924	-	ko00000,ko00002,ko02000	Multidrug Resistance protein
PCFPDMBM_00512	2.87e-196	nodD2	-	-	K	-	-	-	transcriptional regulator
PCFPDMBM_00513	1.92e-246	-	-	-	EGP	ko:K08167,ko:K08169	-	ko00000,ko00002,ko01504,ko02000	Major facilitator superfamily
PCFPDMBM_00514	2.32e-197	cpo	1.11.1.10	-	I	ko:K00433	-	ko00000,ko01000	Alpha beta hydrolase
PCFPDMBM_00515	1.44e-274	lysN	-	-	EK	ko:K05825	ko00300,ko01100,ko01130,ko01210,map00300,map01100,map01130,map01210	ko00000,ko00001,ko01000	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
PCFPDMBM_00516	0.0	-	-	-	P	ko:K02014,ko:K16089,ko:K19611	ko02020,map02020	ko00000,ko00001,ko02000	Receptor
PCFPDMBM_00517	1.42e-194	-	-	-	S	-	-	-	amine dehydrogenase activity
PCFPDMBM_00518	1.46e-12	hipA	2.7.11.1	-	S	ko:K07154	-	ko00000,ko01000,ko01001,ko02048	protein related to capsule biosynthesis enzymes
PCFPDMBM_00519	2.5e-43	hipB	-	-	K	ko:K15773	-	ko00000,ko02048,ko03000	PFAM helix-turn-helix domain protein
PCFPDMBM_00520	0.0	VP1463	-	-	M	ko:K07011	-	ko00000	COG0438 Glycosyltransferase
PCFPDMBM_00521	4.51e-181	-	-	-	L	-	-	-	AAA domain
PCFPDMBM_00522	2.07e-256	yddW	-	-	S	-	-	-	Lipoprotein
PCFPDMBM_00523	5.82e-69	-	-	-	S	-	-	-	ASCH
PCFPDMBM_00524	2.06e-56	-	-	-	S	-	-	-	conserved protein
PCFPDMBM_00525	0.0	glgX	3.2.1.196, 3.2.1.41, 3.2.1.68	CBM48,GH13	G	ko:K01200,ko:K01214,ko:K02438	ko00500,ko01100,ko01110,map00500,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Belongs to the glycosyl hydrolase 13 family
PCFPDMBM_00526	0.0	treY	5.4.99.15	GH13	G	ko:K06044	ko00500,ko01100,ko01110,map00500,map01100,map01110	ko00000,ko00001,ko00002,ko01000	synthase
PCFPDMBM_00527	0.0	treZ	2.4.1.18, 3.2.1.141	CBM48,GH13	G	ko:K00700,ko:K01236	ko00500,ko01100,ko01110,map00500,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko04147	4-alpha-D-((1- 4)-alpha-D-glucano)trehalose trehalohydrolase
PCFPDMBM_00528	1.47e-255	-	-	-	NT	ko:K05876	ko02020,ko02030,map02020,map02030	ko00000,ko00001,ko02035	methyl-accepting chemotaxis protein
PCFPDMBM_00529	1.34e-251	-	-	-	T	ko:K21973	-	ko00000	EAL domain
PCFPDMBM_00530	8.38e-156	-	1.1.1.100	-	IQ	ko:K00059,ko:K18335	ko00051,ko00061,ko00333,ko00780,ko01040,ko01100,ko01120,ko01130,ko01212,map00051,map00061,map00333,map00780,map01040,map01100,map01120,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Dehydrogenases with different specificities (Related to short-chain alcohol dehydrogenases)
PCFPDMBM_00531	1.04e-190	-	-	-	K	ko:K18900	-	ko00000,ko00002,ko01504,ko03000	transcriptional regulator
PCFPDMBM_00532	2.69e-95	osmC	-	-	O	ko:K04063	-	ko00000	OsmC-like protein
PCFPDMBM_00533	1.17e-38	bdm	-	-	S	-	-	-	positive regulation of bacterial-type flagellum assembly
PCFPDMBM_00534	1.77e-22	sra	-	-	J	ko:K02972	-	ko00000,ko03009	Although this protein associates with the 30S subunit of the ribosome it is not considered to be a bona fide ribosomal protein
PCFPDMBM_00536	0.0	maeA	1.1.1.38, 1.1.1.40	-	C	ko:K00027,ko:K00029	ko00620,ko00710,ko01100,ko01120,ko01200,ko02020,map00620,map00710,map01100,map01120,map01200,map02020	ko00000,ko00001,ko00002,ko01000	Malic enzyme
PCFPDMBM_00537	2.48e-173	-	-	-	S	-	-	-	Metallo-beta-lactamase superfamily
PCFPDMBM_00538	1.09e-127	-	-	-	K	-	-	-	helix_turn_helix, arabinose operon control protein
PCFPDMBM_00539	1.26e-177	ndh	1.6.99.3	-	C	ko:K03885	ko00190,map00190	ko00000,ko00001,ko01000	Pyridine nucleotide-disulphide oxidoreductase
PCFPDMBM_00540	1.42e-136	-	1.1.1.100	-	IQ	ko:K00059,ko:K18335	ko00051,ko00061,ko00333,ko00780,ko01040,ko01100,ko01120,ko01130,ko01212,map00051,map00061,map00333,map00780,map01040,map01100,map01120,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	KR domain
PCFPDMBM_00541	2.24e-63	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
PCFPDMBM_00542	1.6e-203	-	-	-	EGP	-	-	-	Major facilitator superfamily
PCFPDMBM_00543	0.0	yheS_2	-	-	S	-	-	-	ABC transporter
PCFPDMBM_00544	6.98e-137	-	3.6.1.1	-	C	ko:K01507	ko00190,map00190	ko00000,ko00001,ko01000	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
PCFPDMBM_00545	2.07e-236	adhP	1.1.1.1	-	S	ko:K00001,ko:K13953	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	alcohol dehydrogenase
PCFPDMBM_00546	0.0	-	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding proteins, family 5 Middle
PCFPDMBM_00547	6.56e-190	-	-	-	P	ko:K02033	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PCFPDMBM_00548	5.9e-77	-	-	-	P	ko:K02034	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PCFPDMBM_00549	0.0	dppF	-	-	P	ko:K02031,ko:K02032,ko:K13892,ko:K13896,ko:K19229,ko:K19230	ko01503,ko02010,ko02024,map01503,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
PCFPDMBM_00550	9.48e-202	-	-	-	C	-	-	-	Luciferase-like monooxygenase
PCFPDMBM_00551	8.74e-215	-	-	-	O	-	-	-	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
PCFPDMBM_00552	3.68e-114	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PCFPDMBM_00553	8.87e-120	-	1.6.5.2	-	S	ko:K00355	ko00130,ko01110,ko05200,ko05225,ko05418,map00130,map01110,map05200,map05225,map05418	ko00000,ko00001,ko01000	NADPH-dependent FMN reductase
PCFPDMBM_00554	5.59e-239	araJ	-	-	EGP	ko:K08156	-	ko00000,ko02000	transport or processing of arabinose polymers
PCFPDMBM_00555	2.02e-184	ppk2	2.7.4.1	-	H	ko:K22468	ko00190,ko03018,map00190,map03018	ko00000,ko00001,ko01000,ko03019	polyphosphate kinase
PCFPDMBM_00556	4.65e-149	fdnI	-	-	C	ko:K00127,ko:K08350	ko00630,ko00680,ko01100,ko01120,ko01200,ko02020,map00630,map00680,map01100,map01120,map01200,map02020	ko00000,ko00001	TIGRFAM Formate dehydrogenase, gamma subunit
PCFPDMBM_00557	3.79e-220	fdnH	-	-	C	ko:K00124,ko:K08349	ko00630,ko00680,ko01100,ko01120,ko01200,ko02020,map00630,map00680,map01100,map01120,map01200,map02020	ko00000,ko00001	formate dehydrogenase
PCFPDMBM_00558	0.0	fdnG	1.17.1.9, 1.17.5.3	-	C	ko:K00123,ko:K08348	ko00630,ko00680,ko01100,ko01120,ko01200,ko02020,map00630,map00680,map01100,map01120,map01200,map02020	ko00000,ko00001,ko01000	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
PCFPDMBM_00559	7.3e-137	fdnG	1.17.1.9, 1.17.5.3	-	C	ko:K00123,ko:K08348	ko00630,ko00680,ko01100,ko01120,ko01200,ko02020,map00630,map00680,map01100,map01120,map01200,map02020	ko00000,ko00001,ko01000	Molybdopterin oxidoreductase Fe4S4 domain
PCFPDMBM_00560	4.38e-190	yddG	-	-	EG	-	-	-	of the drug metabolite transporter (DMT) superfamily
PCFPDMBM_00561	1.55e-214	-	-	-	K	-	-	-	Transcriptional regulator
PCFPDMBM_00562	1.19e-199	-	-	-	E	ko:K01997	ko02010,ko02024,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
PCFPDMBM_00563	2.36e-249	-	-	-	E	ko:K01998	ko02010,ko02024,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
PCFPDMBM_00564	1.05e-177	-	-	-	E	ko:K01995	ko02010,ko02024,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Part of the ABC transporter complexes LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids
PCFPDMBM_00565	9.59e-157	-	-	-	P	ko:K01996	ko02010,ko02024,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
PCFPDMBM_00566	9.61e-269	livK	-	-	E	ko:K01999	ko02010,ko02024,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Extracellular ligand-binding receptor
PCFPDMBM_00567	8.64e-112	-	-	-	K	-	-	-	L-2-amino-thiazoline-4-carboxylic acid hydrolase
PCFPDMBM_00568	1.11e-265	-	3.5.1.6, 3.5.1.87	-	E	ko:K06016	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia
PCFPDMBM_00569	1.15e-174	Z012_03370	-	-	P	ko:K02053	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport systems inner membrane component
PCFPDMBM_00570	7.71e-149	-	-	-	P	-	-	-	Binding-protein-dependent transport systems inner membrane component
PCFPDMBM_00571	1.62e-242	-	-	-	S	ko:K02055	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	extracellular solute-binding protein, family 1
PCFPDMBM_00572	6.43e-190	-	3.6.3.30	-	P	ko:K02010	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex FbpABC involved in Fe(3 ) ions import. Responsible for energy coupling to the transport system
PCFPDMBM_00573	6.6e-143	-	-	-	S	-	-	-	of the beta-lactamase superfamily III
PCFPDMBM_00574	3.26e-192	-	-	-	K	-	-	-	Bacterial regulatory proteins, lacI family
PCFPDMBM_00575	5.25e-304	smvA	-	-	EGP	ko:K08167	-	ko00000,ko00002,ko01504,ko02000	Major facilitator superfamily
PCFPDMBM_00576	7.18e-117	ybjK	-	-	K	-	-	-	transcriptional regulator
PCFPDMBM_00577	0.0	narU	-	-	P	ko:K02575	ko00910,map00910	ko00000,ko00001,ko00002,ko02000	nitrate nitrite transporter
PCFPDMBM_00578	0.0	narZ	1.7.5.1	-	C	ko:K00370	ko00910,ko01120,ko02020,map00910,map01120,map02020	ko00000,ko00001,ko00002,ko01000	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
PCFPDMBM_00579	0.0	narH	1.7.5.1	-	C	ko:K00371	ko00910,ko01120,ko02020,map00910,map01120,map02020	ko00000,ko00001,ko00002,ko01000	nitrate reductase beta subunit
PCFPDMBM_00580	2.76e-152	narW	-	-	C	ko:K00373	ko02020,map02020	ko00000,ko00001	nitrate reductase molybdenum cofactor assembly chaperone
PCFPDMBM_00581	2.22e-160	narI	1.7.5.1	-	C	ko:K00374	ko00910,ko01120,ko02020,map00910,map01120,map02020	ko00000,ko00001,ko00002,ko01000	nitrate reductase, gamma subunit
PCFPDMBM_00582	4.5e-50	chpR	-	-	K	ko:K07172	-	ko00000,ko02048	Antitoxin component of a type II toxin-antitoxin (TA) system. Labile antitoxin that binds to the MazF endoribonuclease toxin and neutralizes its endoribonuclease activity. Is considered to be an 'addiction' molecule as the cell dies in its absence. Toxicity results when the levels of MazE decrease in the cell, leading to mRNA degradation. This effect can be rescued by expression of MazE, but after 6 hours in rich medium the overexpression of MazF leads to programmed cell death. Cell growth and viability are not affected when MazF and MazE are coexpressed. Both MazE and MazE-MazF bind to the promoter region of the mazE- mazF operon to inhibit their own transcription. There are 3 operators to which MazE binds. MazE has higher affinity for promoter DNA in the presence of MazF
PCFPDMBM_00583	7.47e-70	chpA	-	-	T	ko:K07171,ko:K18841	-	ko00000,ko01000,ko02048	Transcriptional modulator of MazE toxin, MazF
PCFPDMBM_00584	3.14e-192	nhoA	2.3.1.118	-	Q	ko:K00675	-	ko00000,ko01000	Belongs to the arylamine N-acetyltransferase family
PCFPDMBM_00585	0.0	-	-	-	P	ko:K02011	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC-type Fe3 transport system permease component
PCFPDMBM_00586	7.04e-221	-	-	-	P	ko:K02012	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
PCFPDMBM_00587	4.06e-149	-	3.6.3.30	-	E	ko:K02010	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	(ABC) transporter
PCFPDMBM_00588	4.76e-133	yddH	-	-	S	-	-	-	Flavin reductase
PCFPDMBM_00589	2.39e-131	-	-	-	O	-	-	-	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
PCFPDMBM_00590	0.0	fusA	-	-	J	ko:K02355	-	ko00000,ko03012,ko03029	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
PCFPDMBM_00591	6.18e-200	ttuD	2.7.1.165	-	G	ko:K11529	ko00030,ko00260,ko00561,ko00630,ko00680,ko01100,ko01120,ko01130,ko01200,map00030,map00260,map00561,map00630,map00680,map01100,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Hydroxypyruvate reductase
PCFPDMBM_00592	2.6e-224	-	1.1.1.83, 1.1.1.93, 4.1.1.73	-	CE	ko:K07246	ko00630,ko00650,map00630,map00650	ko00000,ko00001,ko01000	Isocitrate/isopropylmalate dehydrogenase
PCFPDMBM_00593	6.07e-240	-	-	-	G	ko:K13021	-	ko00000,ko02000	Major facilitator superfamily
PCFPDMBM_00594	1.33e-112	-	-	-	K	-	-	-	LysR substrate binding domain
PCFPDMBM_00595	3.31e-47	pptA	5.3.2.6	-	S	ko:K01821	ko00362,ko00621,ko00622,ko01100,ko01120,ko01220,map00362,map00621,map00622,map01100,map01120,map01220	ko00000,ko00001,ko00002,ko01000	Belongs to the 4-oxalocrotonate tautomerase family
PCFPDMBM_00596	3.2e-150	yncG	-	-	O	ko:K11208	-	ko00000	Glutathione S-Transferase
PCFPDMBM_00597	2.48e-196	-	-	-	ET	ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter substrate-binding protein
PCFPDMBM_00598	1.43e-176	gluA	3.6.3.21	-	E	ko:K02028,ko:K02029,ko:K09972,ko:K10004,ko:K10010,ko:K10038	ko02010,ko02020,map02010,map02020	ko00000,ko00001,ko00002,ko01000,ko02000	(ABC) transporter
PCFPDMBM_00599	4.11e-201	-	-	-	P	ko:K02029	-	ko00000,ko00002,ko02000	amino acid ABC transporter
PCFPDMBM_00600	7.54e-115	-	-	-	K	ko:K03829	-	ko00000,ko01000	N-acetyltransferase
PCFPDMBM_00601	2.01e-214	-	-	-	ET	ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter substrate-binding protein
PCFPDMBM_00602	6.89e-314	moxC	-	-	C	-	-	-	monooxygenase
PCFPDMBM_00603	6.29e-252	yxeP	-	-	S	ko:K21613	-	ko00000,ko01000,ko01002	amidohydrolase
PCFPDMBM_00604	2.44e-205	ytmO	-	-	C	-	-	-	Luciferase Family
PCFPDMBM_00605	5.38e-113	-	-	-	F	-	-	-	adenylate kinase
PCFPDMBM_00606	2.96e-271	aer	-	-	NT	ko:K03406,ko:K03776	ko02020,ko02030,map02020,map02030	ko00000,ko00001,ko02035	chemotaxis, protein
PCFPDMBM_00607	4.17e-187	-	-	-	EGP	-	-	-	Major Facilitator
PCFPDMBM_00608	9.5e-208	-	-	-	T	-	-	-	MASE1
PCFPDMBM_00609	7.09e-278	-	-	-	S	-	-	-	response to pH
PCFPDMBM_00610	5.81e-92	-	-	-	S	-	-	-	conserved protein, contains double-stranded beta-helix domain
PCFPDMBM_00611	1.93e-189	dmlR_3	-	-	K	-	-	-	Transcriptional regulator
PCFPDMBM_00613	0.0	ansP	-	-	E	ko:K11738	-	ko00000,ko02000	Involved in the transporte of L-asparagine
PCFPDMBM_00614	4.08e-88	yjgH	-	-	J	-	-	-	endoribonuclease L-PSP
PCFPDMBM_00615	3.33e-114	tetC	-	-	K	ko:K19047	-	ko00000,ko03000	transcriptional regulator
PCFPDMBM_00616	1.98e-238	yncE	-	-	S	-	-	-	DNA binding
PCFPDMBM_00617	0.0	yncD	-	-	P	ko:K02014	-	ko00000,ko02000	receptor
PCFPDMBM_00618	9.67e-194	-	-	-	NT	ko:K03406	ko02020,ko02030,map02020,map02030	ko00000,ko00001,ko02035	helical bimodular (HBM) domain
PCFPDMBM_00619	5.76e-106	mcbR	-	-	K	ko:K13654	-	ko00000,ko03000	FCD
PCFPDMBM_00620	3.95e-230	yncB	-	-	S	ko:K07119	-	ko00000	nadp-dependent
PCFPDMBM_00621	1.47e-125	-	-	-	K	-	-	-	Helix-turn-helix domain
PCFPDMBM_00622	2.32e-115	yncA	2.3.1.183	-	M	ko:K03823	ko00440,ko01130,map00440,map01130	ko00000,ko00001,ko01000	N-acetyltransferase
PCFPDMBM_00623	3.3e-88	ydcZ	-	-	S	ko:K09936	ko02024,map02024	ko00000,ko00001,ko02000	membrane
PCFPDMBM_00624	4.2e-37	ydcY	-	-	S	-	-	-	Protein of unknown function (DUF2526)
PCFPDMBM_00625	0.0	hbpA	-	-	E	ko:K12368	ko02010,ko02030,map02010,map02030	ko00000,ko00001,ko00002,ko02000	ABC-Type Dipeptide Transport System Periplasmic Component
PCFPDMBM_00626	3.38e-252	srfA	-	-	S	-	-	-	Virulence effector protein
PCFPDMBM_00627	0.0	srfB	-	-	S	-	-	-	PFAM virulence protein SrfB
PCFPDMBM_00628	0.0	srfC	-	-	S	-	-	-	Virulence
PCFPDMBM_00629	3.41e-05	-	-	-	-	-	-	-	-
PCFPDMBM_00630	1.57e-30	ydcX	-	-	S	-	-	-	Toxin GhoT_OrtT
PCFPDMBM_00631	5.75e-64	yeaR	-	-	P	-	-	-	Domain of unknown function (DUF1971)
PCFPDMBM_00632	1.34e-74	-	-	-	P	-	-	-	Domain of unknown function (DUF1971)
PCFPDMBM_00633	1.77e-35	yoaG	-	-	S	-	-	-	Domain of unknown function (DUF1869)
PCFPDMBM_00634	4.23e-296	-	-	-	N	ko:K02406	ko02020,ko02040,ko04621,ko04626,ko05132,ko05134,map02020,map02040,map04621,map04626,map05132,map05134	ko00000,ko00001,ko02035	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
PCFPDMBM_00635	0.0	prr	1.2.1.19	-	C	ko:K00137	ko00330,ko00410,ko01100,map00330,map00410,map01100	ko00000,ko00001,ko01000	belongs to the aldehyde dehydrogenase family
PCFPDMBM_00636	3.64e-180	ydcV	-	-	P	ko:K02053	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter (permease)
PCFPDMBM_00637	2.34e-215	ydcU	-	-	P	ko:K02054	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter (Permease
PCFPDMBM_00638	4.94e-224	ydcT	3.6.3.31	-	P	ko:K02052,ko:K11072,ko:K11076	ko02010,ko02024,map02010,map02024	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
PCFPDMBM_00639	3.17e-281	ydcS	-	-	E	ko:K02055	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Spermidine putrescine ABC transporter substrate-binding protein
PCFPDMBM_00640	0.0	ydcR	-	-	K	-	-	-	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
PCFPDMBM_00641	3.26e-32	-	-	-	-	-	-	-	-
PCFPDMBM_00642	2.75e-244	luxA_2	-	-	C	-	-	-	Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
PCFPDMBM_00643	1.76e-36	-	-	-	-	-	-	-	-
PCFPDMBM_00644	0.0	cioA	1.10.3.14	-	C	ko:K00425	ko00190,ko01100,ko02020,map00190,map01100,map02020	ko00000,ko00001,ko00002,ko01000	oxidase, subunit
PCFPDMBM_00645	8.63e-229	cioB	1.10.3.14	-	C	ko:K00426	ko00190,ko01100,ko02020,map00190,map01100,map02020	ko00000,ko00001,ko00002,ko01000	oxidase subunit
PCFPDMBM_00646	1.94e-18	-	-	-	S	-	-	-	Protein of unknown function (DUF2474)
PCFPDMBM_00647	8.51e-41	-	-	-	S	-	-	-	Protein of unknown function (DUF2554)
PCFPDMBM_00648	0.0	ydcP	-	-	O	ko:K08303	ko05120,map05120	ko00000,ko00001,ko01000,ko01002	peptidase U32
PCFPDMBM_00649	4.68e-121	ydcN	-	-	K	-	-	-	transcriptional regulator
PCFPDMBM_00650	5.27e-247	ydcO	-	-	Q	ko:K05782	-	ko00000,ko02000	protein involved in benzoate metabolism
PCFPDMBM_00651	6.67e-203	-	-	-	K	ko:K07506	-	ko00000,ko03000	AraC family transcriptional regulator
PCFPDMBM_00652	4.32e-203	pagO	-	-	EG	-	-	-	of the drug metabolite transporter (DMT) superfamily
PCFPDMBM_00653	1.68e-154	ydcL	-	-	S	-	-	-	Protein of unknown function (DUF3313)
PCFPDMBM_00654	0.0	dppA2	-	-	E	ko:K02035,ko:K12368	ko02010,ko02024,ko02030,map02010,map02024,map02030	ko00000,ko00001,ko00002,ko02000	ABC-Type Dipeptide Transport System Periplasmic Component
PCFPDMBM_00655	1.81e-292	pepT	3.4.11.4	-	E	ko:K01258	-	ko00000,ko01000,ko01002	Cleaves the N-terminal amino acid of tripeptides
PCFPDMBM_00656	8.81e-135	tehB	2.1.1.265	-	Q	ko:K16868	-	ko00000,ko01000	Tellurite resistance protein TehB
PCFPDMBM_00657	1.94e-224	tehA	-	-	P	ko:K03304	-	ko00000,ko02000	PFAM C4-dicarboxylate transporter malic acid transport protein
PCFPDMBM_00658	2.55e-193	ydcK	-	-	M	-	-	-	Homologous to orf229 gp Streptococcus thermophilus bacteriophage Sfi19 gi 9632919 ref NP_049948.1
PCFPDMBM_00659	1.61e-120	rimL	-	-	J	ko:K03817	-	ko00000,ko01000,ko03009	COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins
PCFPDMBM_00660	0.0	mdoD	-	-	P	ko:K03670	-	ko00000	Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs)
PCFPDMBM_00661	6.34e-180	-	-	-	ET	ko:K10013	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	belongs to the bacterial solute-binding protein 3 family
PCFPDMBM_00662	2.12e-274	ybdL	2.6.1.88	-	E	ko:K14287	-	ko00000,ko01000,ko01007	aminotransferase
PCFPDMBM_00663	1.61e-189	-	-	-	K	ko:K03566	ko02026,map02026	ko00000,ko00001,ko03000	transcriptional regulator
PCFPDMBM_00664	0.0	pnbA	-	CE10	I	ko:K03929	-	ko00000,ko01000	Belongs to the type-B carboxylesterase lipase family
PCFPDMBM_00665	0.0	ydcJ	-	-	S	-	-	-	protein conserved in bacteria
PCFPDMBM_00666	0.0	-	1.8.5.3	-	C	ko:K07306	ko00920,map00920	ko00000,ko00001,ko01000,ko02000	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
PCFPDMBM_00667	5.51e-153	-	-	-	C	ko:K07307	ko00920,map00920	ko00000,ko00001,ko02000	reductase chain B
PCFPDMBM_00668	1.01e-140	-	-	-	S	-	-	-	DMSO reductase anchor subunit (DmsC)
PCFPDMBM_00669	1.24e-33	-	-	-	C	-	-	-	4Fe-4S binding domain protein
PCFPDMBM_00670	8.09e-208	pcaQ	-	-	K	ko:K02623,ko:K14057	-	ko00000,ko03000	transcriptional regulator
PCFPDMBM_00671	0.0	quiA	1.1.5.2, 1.1.5.8	-	G	ko:K00117,ko:K05358	ko00030,ko00400,ko01100,ko01110,ko01130,map00030,map00400,map01100,map01110,map01130	ko00000,ko00001,ko01000	Dehydrogenase
PCFPDMBM_00672	1.33e-83	-	-	-	M	-	-	-	Gram-negative bacterial TonB protein C-terminal
PCFPDMBM_00673	0.0	trg	-	-	NT	ko:K03406,ko:K05874,ko:K05875,ko:K05876,ko:K05877	ko02020,ko02030,map02020,map02030	ko00000,ko00001,ko02035	chemotaxis, protein
PCFPDMBM_00674	5.38e-273	frmA	1.1.1.1, 1.1.1.284	-	C	ko:K00121	ko00010,ko00071,ko00350,ko00625,ko00626,ko00680,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01200,ko01220,ko05204,map00010,map00071,map00350,map00625,map00626,map00680,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01200,map01220,map05204	ko00000,ko00001,ko01000	Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily
PCFPDMBM_00675	3.35e-56	frmR	-	-	S	-	-	-	protein conserved in bacteria
PCFPDMBM_00677	6.17e-12	-	-	-	-	ko:K21975	-	ko00000	-
PCFPDMBM_00678	1.87e-19	ycgZ	-	-	S	ko:K21974	-	ko00000	Probably a connector protein for RcsB C regulation of biofilm formation, providing additional signal input into the two- component signaling pathway. Partially antagonizes the activities of YmgA and AriR, proteins that, via the Rcs phosphorelay, promote the synthesis of colanic acid, an exopolysaccharide and matrix component
PCFPDMBM_00679	1.75e-35	-	-	-	-	-	-	-	-
PCFPDMBM_00680	7.88e-169	-	-	-	-	-	-	-	-
PCFPDMBM_00681	1.29e-212	-	-	-	S	-	-	-	Domain of unknown function (DUF1852)
PCFPDMBM_00682	7.3e-245	metE	2.1.1.14	-	E	ko:K00549	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
PCFPDMBM_00683	1e-101	-	1.11.1.12, 1.11.1.9	-	O	ko:K00432,ko:K05361	ko00480,ko00590,ko04216,ko04918,map00480,map00590,map04216,map04918	ko00000,ko00001,ko01000	Belongs to the glutathione peroxidase family
PCFPDMBM_00685	2.92e-160	yedK	-	-	S	-	-	-	Belongs to the SOS response-associated peptidase family
PCFPDMBM_00686	1.1e-253	umuC	-	-	L	ko:K03502	-	ko00000,ko03400	DNA polymerase
PCFPDMBM_00687	1.04e-166	dsbG	-	-	O	ko:K03805	-	ko00000,ko03110	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
PCFPDMBM_00688	0.0	VP2006	-	-	CO	ko:K08344	-	ko00000,ko02000	Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps
PCFPDMBM_00690	4.06e-87	pgaD	-	-	S	ko:K11937	ko02026,map02026	ko00000,ko00001	Poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD
PCFPDMBM_00691	2.81e-316	pgaC	-	GT2	M	ko:K11936	ko02026,map02026	ko00000,ko00001,ko01000,ko01003,ko02000	Poly-beta-1,6-N-acetyl-D-glucosamine synthase
PCFPDMBM_00692	0.0	pgaB	-	-	G	ko:K11931,ko:K21478	ko02026,map02026	ko00000,ko00001,ko01000	Polysaccharide deacetylase
PCFPDMBM_00693	0.0	pgaA	-	-	H	ko:K11935	ko02026,map02026	ko00000,ko00001	Exports the biofilm adhesin polysaccharide poly-beta- 1,6-N-acetyl-D-glucosamine (PGA) across the outer membrane. The PGA transported seems to be partially N-deacetylated since N- deacetylation of PGA by PgaB is needed for PGA export through the PgaA porin
PCFPDMBM_00694	0.0	-	-	-	S	-	-	-	Protein of unknown function (DUF560)
PCFPDMBM_00697	1.14e-106	-	-	-	S	-	-	-	polyketide cyclase
PCFPDMBM_00698	1.59e-145	-	-	-	M	-	-	-	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
PCFPDMBM_00699	5.67e-124	-	-	-	S	-	-	-	Belongs to the short-chain dehydrogenases reductases (SDR) family
PCFPDMBM_00700	6.35e-141	-	-	-	K	-	-	-	AraC family transcriptional regulator
PCFPDMBM_00701	2.09e-154	-	-	-	K	-	-	-	transcriptional
PCFPDMBM_00702	1.15e-165	-	-	-	GM	-	-	-	Nad-dependent epimerase dehydratase
PCFPDMBM_00703	7e-161	-	-	-	GM	-	-	-	NmrA-like family
PCFPDMBM_00704	1.58e-142	-	-	-	S	-	-	-	Beta-lactamase
PCFPDMBM_00705	2.17e-171	mexT	-	-	K	ko:K18297	-	ko00000,ko00002,ko01504,ko03000	transcriptional regulator
PCFPDMBM_00706	3.76e-155	-	-	-	K	-	-	-	AraC-type transcriptional regulator N-terminus
PCFPDMBM_00707	3.41e-156	-	-	-	IQ	-	-	-	short-chain dehydrogenase
PCFPDMBM_00708	2.98e-53	yjgJ	-	-	K	ko:K19335	-	ko00000,ko03000	tetR family
PCFPDMBM_00709	5.13e-142	-	-	-	S	-	-	-	Protein of unknown function (DUF1214)
PCFPDMBM_00710	1.1e-54	-	-	-	M	-	-	-	Glycosyltransferase sugar-binding region containing DXD motif
PCFPDMBM_00711	5.25e-87	umuD	-	-	KT	ko:K03503	-	ko00000,ko01000,ko01002,ko03400	Belongs to the peptidase S24 family
PCFPDMBM_00712	5.14e-221	yhdH	-	-	C	ko:K19745	ko00640,ko01100,map00640,map01100	ko00000,ko00001,ko01000	Quinone oxidoreductase, YhdH YhfP family
PCFPDMBM_00713	1.43e-143	nemR	-	-	K	ko:K16137	-	ko00000,ko03000	Bacterial transcriptional repressor C-terminal
PCFPDMBM_00714	4.12e-164	-	-	-	EGP	-	-	-	Major facilitator superfamily
PCFPDMBM_00716	1.37e-125	-	-	-	K	-	-	-	LysR substrate binding domain
PCFPDMBM_00717	5.01e-160	-	1.13.12.16	-	S	ko:K00459	ko00910,map00910	ko00000,ko00001,ko01000	Nitronate monooxygenase
PCFPDMBM_00718	2.91e-159	-	-	-	K	-	-	-	Transcriptional regulator
PCFPDMBM_00719	1.72e-126	-	-	-	IQ	-	-	-	reductase
PCFPDMBM_00720	1.91e-28	dmpI	5.3.2.6	-	G	ko:K01821	ko00362,ko00621,ko00622,ko01100,ko01120,ko01220,map00362,map00621,map00622,map01100,map01120,map01220	ko00000,ko00001,ko00002,ko01000	4-oxalocrotonate tautomerase
PCFPDMBM_00722	2.21e-160	-	-	-	GM	-	-	-	NmrA-like family
PCFPDMBM_00723	1.58e-158	-	-	-	K	ko:K18900	-	ko00000,ko00002,ko01504,ko03000	Transcriptional regulator
PCFPDMBM_00724	2.13e-122	-	-	-	S	-	-	-	Phosphohydrolase
PCFPDMBM_00725	2.19e-126	-	-	-	K	-	-	-	transcriptional regulator
PCFPDMBM_00726	2.3e-68	-	-	-	S	-	-	-	Putative stress-induced transcription regulator
PCFPDMBM_00727	2.1e-177	-	-	-	S	-	-	-	Alpha/beta hydrolase family
PCFPDMBM_00728	0.0	-	-	-	M	-	-	-	mechanosensitive ion channel
PCFPDMBM_00729	8.9e-170	-	4.3.3.7	-	EM	ko:K01714	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the DapA family
PCFPDMBM_00730	7.94e-12	yciG	-	-	S	ko:K06884	-	ko00000	Stress-induced protein
PCFPDMBM_00732	4.15e-226	-	-	-	EGP	ko:K03762	-	ko00000,ko02000	COG0477 Permeases of the major facilitator superfamily
PCFPDMBM_00733	4.01e-122	cybB	-	-	C	ko:K12262	-	ko00000	B-type di-heme cytochrome with a major alpha-absorption peak at 561 nm and a minor peak at 555 nm
PCFPDMBM_00734	3.54e-231	gapC	1.2.1.12	-	G	ko:K00134	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
PCFPDMBM_00735	1.51e-208	xynB	-	-	I	-	-	-	esterase lipase
PCFPDMBM_00736	0.0	aldA	1.2.1.21, 1.2.1.22	-	C	ko:K07248	ko00620,ko00630,ko01120,map00620,map00630,map01120	ko00000,ko00001,ko01000	belongs to the aldehyde dehydrogenase family
PCFPDMBM_00737	1.31e-177	ydcF	-	-	S	-	-	-	DUF218 domain
PCFPDMBM_00738	1.93e-303	-	-	-	EGP	-	-	-	Major facilitator superfamily
PCFPDMBM_00739	0.0	emrY	-	-	EGP	-	-	-	Major Facilitator Superfamily
PCFPDMBM_00740	6.9e-203	-	-	-	V	ko:K03543	-	ko00000,ko00002,ko02000	Secretion protein
PCFPDMBM_00741	4.59e-293	oprM	-	-	M	-	-	-	membrane
PCFPDMBM_00742	2.49e-149	mdmC	-	-	S	-	-	-	O-Methyltransferase
PCFPDMBM_00743	0.0	hrpA	3.6.4.13	-	L	ko:K03578	-	ko00000,ko01000	ATP-dependent helicase hrpA
PCFPDMBM_00744	2.72e-135	azoR	-	-	C	ko:K01118	-	ko00000,ko01000	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
PCFPDMBM_00745	2.27e-249	-	-	-	G	-	-	-	Major facilitator superfamily
PCFPDMBM_00746	7.41e-108	hipB	-	-	K	-	-	-	Transcriptional regulator
PCFPDMBM_00747	8.54e-81	ttr	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
PCFPDMBM_00748	3.37e-72	-	2.7.11.1	-	T	ko:K04757	-	ko00000,ko01000,ko01001,ko03021	Anti-sigma regulatory factor (Ser Thr protein kinase)
PCFPDMBM_00749	9.64e-68	-	-	-	T	ko:K04749	-	ko00000,ko03021	Belongs to the anti-sigma-factor antagonist family
PCFPDMBM_00750	3.77e-256	-	3.1.3.3	-	T	ko:K07315	-	ko00000,ko01000,ko03021	response regulator
PCFPDMBM_00751	2.35e-212	-	-	-	-	-	-	-	-
PCFPDMBM_00752	2.31e-277	-	-	-	S	-	-	-	OpgC protein
PCFPDMBM_00753	0.0	-	2.4.1.12	GT2	M	ko:K00694	ko00500,ko01100,ko02026,map00500,map01100,map02026	ko00000,ko00001,ko01000,ko01003,ko02000	Cellulose synthase
PCFPDMBM_00754	9.53e-287	-	-	-	NU	-	-	-	Protein of unknown function (DUF3131)
PCFPDMBM_00755	0.0	-	-	-	G	-	-	-	Protein of unknown function (DUF3131)
PCFPDMBM_00756	0.0	-	-	-	G	-	-	-	Protein of unknown function (DUF3131)
PCFPDMBM_00757	1.17e-90	VPA1107	-	-	C	-	-	-	nitric oxide dioxygenase activity
PCFPDMBM_00758	0.0	-	-	-	T	-	-	-	Histidine kinase
PCFPDMBM_00759	0.0	-	3.2.1.25	-	G	ko:K01192	ko00511,ko04142,map00511,map04142	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 2 family
PCFPDMBM_00760	1.01e-48	-	-	-	S	-	-	-	RelE toxin of RelE / RelB toxin-antitoxin system
PCFPDMBM_00761	9.33e-121	paaY	-	-	S	ko:K02617,ko:K08279	-	ko00000	Phenylacetic acid degradation protein PaaY
PCFPDMBM_00762	3.1e-217	paaX	-	-	K	ko:K02616	-	ko00000,ko03000	phenylacetic acid degradation operon negative regulatory protein
PCFPDMBM_00763	1.48e-314	paaK	6.2.1.30	-	H	ko:K01912	ko00360,ko01120,ko05111,map00360,map01120,map05111	ko00000,ko00001,ko01000	Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
PCFPDMBM_00764	1.81e-272	paaJ	2.3.1.16, 2.3.1.174, 2.3.1.223, 2.3.1.9	-	I	ko:K00626,ko:K00632,ko:K02615	ko00071,ko00072,ko00280,ko00281,ko00310,ko00360,ko00362,ko00380,ko00592,ko00620,ko00630,ko00640,ko00642,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00281,map00310,map00360,map00362,map00380,map00592,map00620,map00630,map00640,map00642,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed
PCFPDMBM_00765	3.99e-96	paaI	-	-	Q	ko:K02614	ko00360,map00360	ko00000,ko00001,ko01000	phenylacetic acid degradation protein
PCFPDMBM_00766	1.04e-294	paaH	1.1.1.157	-	I	ko:K00074	ko00360,ko00362,ko00650,ko01100,ko01120,map00360,map00362,map00650,map01100,map01120	ko00000,ko00001,ko01000	3-hydroxyacyl-coa dehydrogenase
PCFPDMBM_00767	2.21e-182	paaG	5.3.3.18	-	I	ko:K15866	ko00360,ko01120,map00360,map01120	ko00000,ko00001,ko01000	Enoyl-CoA hydratase
PCFPDMBM_00768	3.4e-158	paaF	4.2.1.17	-	I	ko:K01692	ko00071,ko00280,ko00281,ko00310,ko00360,ko00362,ko00380,ko00410,ko00627,ko00640,ko00650,ko00903,ko00930,ko01100,ko01110,ko01120,ko01130,ko01212,map00071,map00280,map00281,map00310,map00360,map00362,map00380,map00410,map00627,map00640,map00650,map00903,map00930,map01100,map01110,map01120,map01130,map01212	ko00000,ko00001,ko00002,ko01000	Belongs to the enoyl-CoA hydratase isomerase family
PCFPDMBM_00769	8.9e-248	paaE	-	-	C	ko:K02613	ko00360,ko01120,map00360,map01120	ko00000,ko00001	COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1
PCFPDMBM_00770	2.65e-113	paaD	-	-	L	ko:K02612	ko00360,ko01120,map00360,map01120	ko00000,ko00001	phenylacetate-CoA oxygenase, PaaJ subunit
PCFPDMBM_00771	1.74e-168	paaC	1.14.13.149	-	S	ko:K02611	ko00360,ko01120,map00360,map01120	ko00000,ko00001,ko01000	Phenylacetate-CoA oxygenase, PaaI subunit
PCFPDMBM_00772	4.44e-65	paaB	-	-	Q	ko:K02610	ko00360,ko01120,map00360,map01120	ko00000,ko00001	Phenylacetate-CoA oxygenase
PCFPDMBM_00773	7.44e-230	paaA	1.14.13.149	-	S	ko:K02609	ko00360,ko01120,map00360,map01120	ko00000,ko00001,ko01000	Phenylacetate-CoA oxygenase
PCFPDMBM_00774	0.0	paaN	1.2.1.91, 3.3.2.12	-	CI	ko:K02618	ko00360,ko01120,map00360,map01120	ko00000,ko00001,ko01000	Aldehyde dehydrogenase
PCFPDMBM_00775	0.0	tynA	1.4.3.21	-	Q	ko:K00276	ko00260,ko00350,ko00360,ko00410,ko00950,ko00960,ko01100,ko01110,map00260,map00350,map00360,map00410,map00950,map00960,map01100,map01110	ko00000,ko00001,ko01000	amine oxidase
PCFPDMBM_00776	0.0	yjcS	-	-	Q	-	-	-	COG2015 Alkyl sulfatase and related hydrolases
PCFPDMBM_00777	6.92e-141	-	-	-	T	-	-	-	diguanylate cyclase
PCFPDMBM_00778	0.0	feaB	1.2.1.39	-	C	ko:K00146	ko00360,ko00643,ko01100,ko01120,map00360,map00643,map01100,map01120	ko00000,ko00001,ko01000	belongs to the aldehyde dehydrogenase family
PCFPDMBM_00779	1.94e-209	feaR	-	-	K	ko:K14063	-	ko00000,ko03000	transcriptional regulator
PCFPDMBM_00780	2.53e-58	ydbL	-	-	S	ko:K09978	-	ko00000	protein conserved in bacteria
PCFPDMBM_00781	7.56e-36	ynbE	-	-	S	-	-	-	(Lipo)protein
PCFPDMBM_00782	0.0	ydbH	-	-	S	-	-	-	Dicarboxylate transport
PCFPDMBM_00783	9.75e-229	ldhA	1.1.1.28	-	CH	ko:K03778	ko00620,ko01120,map00620,map01120	ko00000,ko00001,ko01000	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PCFPDMBM_00784	5.68e-81	hslJ	-	-	O	ko:K03668	-	ko00000	Heat shock protein
PCFPDMBM_00785	1.51e-53	ydbJ	-	-	S	-	-	-	Domain of unknown function (DUF333)
PCFPDMBM_00786	0.0	nifJ	1.2.7.1	-	C	ko:K03737	ko00010,ko00020,ko00620,ko00650,ko00720,ko01100,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00650,map00720,map01100,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
PCFPDMBM_00787	3.52e-252	ompN	-	-	M	ko:K09475,ko:K09476,ko:K11929,ko:K14062	ko01501,ko02020,map01501,map02020	ko00000,ko00001,ko00002,ko01504,ko02000	Belongs to the Gram-negative porin family
PCFPDMBM_00788	4.74e-92	-	-	-	S	-	-	-	Glutathione-dependent formaldehyde-activating
PCFPDMBM_00789	1.18e-97	-	-	-	-	-	-	-	-
PCFPDMBM_00790	2.2e-223	ttcA	-	-	J	ko:K14058	-	ko00000,ko03016	Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine cysteine desulfurase (IscS) system
PCFPDMBM_00791	9.1e-317	dbpA	3.6.4.13	-	JKL	ko:K05591	-	ko00000,ko01000,ko03009	DEAD-box RNA helicase involved in the assembly of the 50S ribosomal subunit. Has an RNA-dependent ATPase activity, which is specific for 23S rRNA, and a 3' to 5' RNA helicase activity that uses the energy of ATP hydrolysis to destabilize and unwind short rRNA duplexes
PCFPDMBM_00794	4.67e-233	zntB	-	-	P	ko:K16074	-	ko00000,ko02000	Zinc transport protein zntB
PCFPDMBM_00795	1.66e-169	-	-	-	NT	-	-	-	methyl-accepting chemotaxis protein
PCFPDMBM_00797	1.62e-275	ydaM	2.7.7.65	-	T	ko:K19707,ko:K21088	ko02026,map02026	ko00000,ko00001,ko01000,ko03021	Diguanylate cyclase
PCFPDMBM_00798	1.8e-127	pfpI	3.5.1.124	-	S	ko:K05520	-	ko00000,ko01000,ko01002	Intracellular protease
PCFPDMBM_00799	7.18e-74	-	-	-	-	-	-	-	-
PCFPDMBM_00800	2.09e-159	-	-	-	M	ko:K11911	-	ko00000,ko00002,ko02044	ImpA domain protein
PCFPDMBM_00801	1.15e-98	-	-	-	S	ko:K11905	-	ko00000,ko00002,ko02044	Gene 25-like lysozyme
PCFPDMBM_00802	8.89e-113	-	-	-	S	ko:K11906	ko03070,map03070	ko00000,ko00001,ko00002,ko02044	Type VI secretion
PCFPDMBM_00803	5.83e-251	-	-	-	S	ko:K11895	ko02025,map02025	ko00000,ko00001,ko00002,ko02044	Type VI secretion, TssG
PCFPDMBM_00804	0.0	-	-	-	S	ko:K11895,ko:K11896	ko02025,map02025	ko00000,ko00001,ko00002,ko02044	Type VI secretion
PCFPDMBM_00806	1.69e-59	-	-	-	S	-	-	-	to Yersinia kristensenii ATCC 33638
PCFPDMBM_00807	2.35e-104	-	-	-	S	-	-	-	to Yersinia kristensenii ATCC 33638
PCFPDMBM_00808	2.16e-30	-	-	-	S	ko:K11910	-	ko00000,ko00002,ko02044	Type VI secretion, EvfE, EvfF, ImpA, BimE, VC_A0119, VasJ
PCFPDMBM_00809	1.24e-130	kefF	-	-	C	ko:K11746	-	ko00000,ko02000	Regulatory subunit of a potassium efflux system that confers protection against electrophiles. Required for full activity of KefC. Shows redox enzymatic activity, but this enzymatic activity is not required for activation of KefC
PCFPDMBM_00810	0.0	kefC	-	-	P	ko:K03455,ko:K11745,ko:K11747	-	ko00000,ko02000	Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
PCFPDMBM_00811	2.48e-115	folA	1.5.1.3	-	H	ko:K00287,ko:K18590	ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523	br01600,ko00000,ko00001,ko00002,ko01000,ko01504	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
PCFPDMBM_00812	6.73e-208	apaH	3.6.1.41	-	T	ko:K01525	ko00230,map00230	ko00000,ko00001,ko01000	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
PCFPDMBM_00813	5.95e-84	-	-	-	P	ko:K06195	-	ko00000	mitochondrion morphogenesis
PCFPDMBM_00814	2.81e-191	ksgA	2.1.1.182	-	J	ko:K02528	-	ko00000,ko01000,ko03009	Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
PCFPDMBM_00815	3.05e-234	pdxA	1.1.1.262	-	H	ko:K00097	ko00750,ko01100,map00750,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
PCFPDMBM_00816	1.88e-290	surA	5.2.1.8	-	M	ko:K03771	-	ko00000,ko01000,ko03110	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
PCFPDMBM_00817	0.0	lptD	-	-	M	ko:K04744	-	ko00000,ko02000	Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
PCFPDMBM_00818	8.93e-183	djlA	-	-	O	ko:K05801	-	ko00000,ko03110	Regulatory DnaK co-chaperone. Direct interaction between DnaK and DjlA is needed for the induction of the wcaABCDE operon, involved in the synthesis of a colanic acid polysaccharide capsule, possibly through activation of the RcsB RcsC phosphotransfer signaling pathway. The colanic acid capsule may help the bacterium survive conditions outside the host
PCFPDMBM_00819	6.16e-159	rluA	5.4.99.28, 5.4.99.29	-	J	ko:K06177	-	ko00000,ko01000,ko03009,ko03016	Responsible for synthesis of pseudouridine from uracil
PCFPDMBM_00820	0.0	rapA	-	-	K	ko:K03580	-	ko00000,ko01000,ko03021	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
PCFPDMBM_00821	0.0	polB	2.7.7.7	-	L	ko:K02336	-	ko00000,ko01000,ko03400	DNA polymerase
PCFPDMBM_00822	1.7e-171	araD	5.1.3.4	-	G	ko:K03077	ko00040,ko00053,ko01100,ko01120,map00040,map00053,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate
PCFPDMBM_00824	0.0	araB	2.7.1.16	-	C	ko:K00853	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko01000	Belongs to the ribulokinase family
PCFPDMBM_00825	3.22e-210	araC	-	-	K	ko:K02099	-	ko00000,ko03000	regulates the araBAD and araFGH operons and other genes involved in the transport and catabolism of L-arabinose
PCFPDMBM_00826	5.83e-175	yabI	-	-	I	-	-	-	membrane-associated protein
PCFPDMBM_00827	1.26e-148	thiQ	-	-	P	ko:K02062	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system
PCFPDMBM_00828	0.0	thiP	-	-	P	ko:K02063	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	with TbpA and ThiQ functions in transport of thiamine and thiamine pyrophosphate into the cell
PCFPDMBM_00829	4.29e-229	tbpA	-	-	P	ko:K02064	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	thiamine ABC transporter
PCFPDMBM_00830	0.0	sgrR	-	-	K	ko:K11925	-	ko00000,ko03000	Activates the small RNA gene sgrS under glucose- phosphate stress conditions as well as yfdZ. Represses its own transcription under both stress and non-stress conditions. Might act as a sensor of the intracellular accumulation of phosphoglucose by binding these molecules in its C-terminal solute-binding domain
PCFPDMBM_00831	5.15e-24	-	-	-	S	-	-	-	Inhibitor of glucose uptake transporter SgrT
PCFPDMBM_00832	1.56e-250	setA	-	-	EGP	ko:K03291	-	ko00000,ko02000	sugar efflux transporter
PCFPDMBM_00833	5.1e-140	leuD	4.2.1.33, 4.2.1.35	-	E	ko:K01704	ko00290,ko00660,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map01100,map01110,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
PCFPDMBM_00834	0.0	leuC	4.2.1.33, 4.2.1.35	-	H	ko:K01703	ko00290,ko00660,ko00966,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map00966,map01100,map01110,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
PCFPDMBM_00835	1.98e-259	leuB	1.1.1.85	-	CE	ko:K00052	ko00290,ko00660,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map01100,map01110,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate
PCFPDMBM_00836	0.0	leuA	2.3.3.13	-	E	ko:K01649	ko00290,ko00620,ko01100,ko01110,ko01210,ko01230,map00290,map00620,map01100,map01110,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
PCFPDMBM_00837	1.99e-208	leuO	-	-	K	ko:K05798	-	ko00000,ko03000	transcriptional regulator
PCFPDMBM_00838	0.0	ilvI	2.2.1.6	-	H	ko:K01652	ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	acetolactate synthase
PCFPDMBM_00839	6.76e-106	ilvH	2.2.1.6	-	E	ko:K01653	ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	acetolactate synthase
PCFPDMBM_00840	1.11e-239	fruR	-	-	K	ko:K03435	-	ko00000,ko03000	Transcriptional
PCFPDMBM_00841	4.7e-103	mraZ	-	-	K	ko:K03925	-	ko00000	Negatively regulates its own expression and that of the subsequent genes in the proximal part of the division and cell wall (dcw) gene cluster. Acts by binding directly to DNA. May also regulate the expression of genes outside the dcw cluster
PCFPDMBM_00842	1.31e-216	rsmH	2.1.1.199	-	J	ko:K03438	-	ko00000,ko01000,ko03009	Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
PCFPDMBM_00843	1.6e-77	ftsL	-	-	D	ko:K03586	-	ko00000,ko03036	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
PCFPDMBM_00844	0.0	ftsI	3.4.16.4	-	M	ko:K03587	ko00550,ko01501,map00550,map01501	ko00000,ko00001,ko01000,ko01011,ko03036	Catalyzes cross-linking of the peptidoglycan cell wall at the division septum
PCFPDMBM_00845	0.0	murE	6.3.2.13	-	M	ko:K01928	ko00300,ko00550,map00300,map00550	ko00000,ko00001,ko01000,ko01011	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
PCFPDMBM_00846	4.37e-301	murF	6.3.2.10	-	M	ko:K01929	ko00300,ko00550,ko01100,ko01502,map00300,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
PCFPDMBM_00847	1.24e-256	mraY	2.7.8.13	-	M	ko:K01000	ko00550,ko01100,ko01502,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
PCFPDMBM_00848	3.42e-314	murD	6.3.2.9	-	M	ko:K01925	ko00471,ko00550,ko01100,map00471,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
PCFPDMBM_00849	7.04e-288	ftsW	-	-	M	ko:K03588	ko04112,map04112	ko00000,ko00001,ko02000,ko03036	Peptidoglycan polymerase that is essential for cell division
PCFPDMBM_00850	4.6e-249	murG	2.4.1.227	GT28	M	ko:K02563	ko00550,ko01100,ko01502,ko04112,map00550,map01100,map01502,map04112	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
PCFPDMBM_00851	0.0	murC	6.3.2.8	-	M	ko:K01924	ko00471,ko00550,ko01100,map00471,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Belongs to the MurCDEF family
PCFPDMBM_00852	5.5e-210	ddl	6.3.2.4	-	F	ko:K01921	ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Belongs to the D-alanine--D-alanine ligase family
PCFPDMBM_00853	8.35e-193	ftsQ	-	-	D	ko:K03589	ko04112,map04112	ko00000,ko00001,ko03036	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
PCFPDMBM_00854	3.72e-301	ftsA	-	-	D	ko:K03590	ko04112,map04112	ko00000,ko00001,ko03036,ko04812	Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
PCFPDMBM_00855	7.55e-265	ftsZ	-	-	D	ko:K03531	ko04112,map04112	ko00000,ko00001,ko02048,ko03036,ko04812	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
PCFPDMBM_00856	5.39e-221	lpxC	3.5.1.108	-	M	ko:K02535	ko00540,ko01100,map00540,map01100	ko00000,ko00001,ko00002,ko01000,ko01005	Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis
PCFPDMBM_00857	1.73e-96	secM	-	-	U	ko:K13301	ko03060,ko03070,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Regulates secA expression by translational coupling of the secM secA operon. Translational pausing at a specific Pro residue 5 residues before the end of the protein may allow disruption of a mRNA repressor helix that normally suppresses secA translation initiation
PCFPDMBM_00858	0.0	secA	-	-	U	ko:K03070	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
PCFPDMBM_00859	1.23e-85	mutT	3.6.1.55	-	L	ko:K03574	-	ko00000,ko01000,ko03400	belongs to the nudix hydrolase family
PCFPDMBM_00860	1.05e-40	yacG	-	-	S	ko:K09862	-	ko00000	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
PCFPDMBM_00861	8.66e-173	zapD	-	-	D	ko:K18778	-	ko00000,ko03036	Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity
PCFPDMBM_00862	2.99e-124	coaE	2.7.1.24	-	F	ko:K00859	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
PCFPDMBM_00863	6.28e-248	guaC	1.1.1.205, 1.7.1.7	-	F	ko:K00088,ko:K00364	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
PCFPDMBM_00864	3.38e-225	hofC	-	-	U	ko:K02505,ko:K02653	-	ko00000,ko02035,ko02044	type II secretion system
PCFPDMBM_00865	8.56e-306	hofB	-	-	NU	ko:K02454,ko:K02504,ko:K02652	ko03070,ko05111,map03070,map05111	ko00000,ko00001,ko00002,ko02035,ko02044	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
PCFPDMBM_00866	6.41e-91	ppdD	-	-	NU	ko:K02650,ko:K02682	ko02020,map02020	ko00000,ko00001,ko02035,ko02044	Belongs to the N-Me-Phe pilin family
PCFPDMBM_00867	3.83e-201	nadC	2.4.2.19	-	H	ko:K00767	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the NadC ModD family
PCFPDMBM_00868	4.27e-132	ampD	3.5.1.28	-	V	ko:K01447,ko:K03806	-	ko00000,ko01000,ko01011	Negative regulator of beta-lactamase expression
PCFPDMBM_00869	3.54e-195	ampE	-	-	V	ko:K03807	-	ko00000	regulatory protein AmpE
PCFPDMBM_00870	5.74e-242	abf2	-	-	G	-	-	-	Belongs to the glycosyl hydrolase 43 family
PCFPDMBM_00871	0.0	yicJ	-	-	G	ko:K03292	-	ko00000	COG2211 Na melibiose symporter and related transporters
PCFPDMBM_00872	0.0	aroP	-	-	E	ko:K11732,ko:K11734	-	ko00000,ko02000	amino acid
PCFPDMBM_00873	5.79e-170	pdhR	-	-	K	ko:K05799,ko:K11474	-	ko00000,ko03000	Regulatory protein GntR HTH
PCFPDMBM_00874	0.0	aceE	1.2.4.1	-	C	ko:K00163	ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000	Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
PCFPDMBM_00875	0.0	aceF	2.3.1.12	-	C	ko:K00627	ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000	The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
PCFPDMBM_00876	0.0	lpdA	1.8.1.4	-	F	ko:K00382	ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000,ko04147	Lipoamide dehydrogenase is a component of the glycine cleavage system as well as of the alpha-ketoacid dehydrogenase complexes
PCFPDMBM_00877	1.18e-160	-	-	-	N	-	-	-	Protein of unknown function (DUF2950)
PCFPDMBM_00878	3.44e-271	yacH	-	-	M	-	-	-	Protein of unknown function (DUF3300)
PCFPDMBM_00880	0.0	acnB	4.2.1.3, 4.2.1.99	-	C	ko:K01682	ko00020,ko00630,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Belongs to the aconitase IPM isomerase family
PCFPDMBM_00881	9.32e-81	yacL	-	-	S	ko:K09910	-	ko00000	Belongs to the UPF0231 family
PCFPDMBM_00882	2.62e-190	speD	4.1.1.50	-	E	ko:K01611	ko00270,ko00330,ko01100,map00270,map00330,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
PCFPDMBM_00883	2.09e-208	speE	2.5.1.16	-	E	ko:K00797	ko00270,ko00330,ko00410,ko00480,ko01100,map00270,map00330,map00410,map00480,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
PCFPDMBM_00884	2.18e-69	yacC	-	-	S	-	-	-	Type II secretion system pilotin lipoprotein (PulS_OutS)
PCFPDMBM_00885	0.0	cueO	1.3.3.5	-	Q	ko:K08100,ko:K14588	ko00860,ko01110,map00860,map01110	ko00000,ko00001,ko01000	Multi-copper
PCFPDMBM_00886	0.0	gcd	1.1.5.2, 1.1.5.8	-	C	ko:K00117,ko:K05358	ko00030,ko00400,ko01100,ko01110,ko01130,map00030,map00400,map01100,map01110,map01130	ko00000,ko00001,ko01000	Dehydrogenase
PCFPDMBM_00887	4.83e-120	hpt	2.4.2.8	-	F	ko:K00760	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the purine pyrimidine phosphoribosyltransferase family
PCFPDMBM_00888	3.17e-157	can	4.2.1.1	-	P	ko:K01673	ko00910,map00910	ko00000,ko00001,ko01000	Reversible hydration of carbon dioxide
PCFPDMBM_00889	4.33e-208	yadG	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	AAA domain, putative AbiEii toxin, Type IV TA system
PCFPDMBM_00890	1.48e-173	yadH	-	-	V	ko:K01992	-	ko00000,ko00002,ko02000	Transport Permease Protein
PCFPDMBM_00891	3.27e-95	yadI	-	-	G	-	-	-	IIa component
PCFPDMBM_00892	2.54e-286	yadE	-	-	G	-	-	-	Polysaccharide deacetylase
PCFPDMBM_00893	1.91e-85	panD	4.1.1.11	-	H	ko:K01579	ko00410,ko00770,ko01100,ko01110,map00410,map00770,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
PCFPDMBM_00894	1.3e-181	panC	6.3.2.1	-	H	ko:K01918	ko00410,ko00770,ko01100,ko01110,map00410,map00770,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
PCFPDMBM_00895	1.18e-178	panB	2.1.2.11	-	H	ko:K00606	ko00770,ko01100,ko01110,map00770,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate
PCFPDMBM_00896	4.11e-105	folK	2.7.6.3	-	H	ko:K00950	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
PCFPDMBM_00897	0.0	pcnB	2.7.7.19	-	H	ko:K00970	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control
PCFPDMBM_00898	6e-213	gluQ	-	-	J	ko:K01894	-	ko00000,ko01000,ko01007,ko03016	Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5- dihydroxy-2-cyclopenten-1-yl) moiety of the queuosine in the wobble position of the QUC anticodon
PCFPDMBM_00899	1.78e-102	dksA	-	-	K	ko:K06204	ko02026,map02026	ko00000,ko00001,ko03000,ko03009,ko03021	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters. Also required for regulation of fis expression
PCFPDMBM_00900	4.05e-151	sfsA	-	-	S	ko:K06206	-	ko00000	Belongs to the SfsA family
PCFPDMBM_00901	3.41e-119	ligT	3.1.4.58	-	J	ko:K01975	-	ko00000,ko01000,ko03016	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
PCFPDMBM_00902	0.0	hrpB	3.6.4.13	-	L	ko:K03579	-	ko00000,ko01000	ATP-dependent helicase
PCFPDMBM_00903	0.0	mrcB	2.4.1.129, 3.4.16.4	GT51	M	ko:K05365	ko00550,map00550	ko00000,ko00001,ko01000,ko01003,ko01011	Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross-linking of the peptide subunits)
PCFPDMBM_00904	0.0	fhuA	-	-	P	ko:K02014	-	ko00000,ko02000	TonB-dependent siderophore receptor
PCFPDMBM_00905	1.19e-188	fhuC	3.6.3.34	-	HP	ko:K02013	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC-type cobalamin Fe3 -siderophores transport systems, ATPase components
PCFPDMBM_00906	1.24e-203	fhuD	-	-	P	ko:K02016	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC-type Fe3 -hydroxamate transport system, periplasmic component
PCFPDMBM_00907	0.0	fhuB	-	-	P	ko:K02015	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PCFPDMBM_00908	3.09e-304	hemL	5.4.3.8	-	H	ko:K01845	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	ko00000,ko00001,ko00002,ko01000,ko01007	Glutamate-1-semialdehyde aminotransferase
PCFPDMBM_00909	6.35e-311	clcA	-	-	P	ko:K03281	-	ko00000	Probably acts as an electrical shunt for an outwardly- directed proton pump that is linked to amino acid decarboxylation, as part of the extreme acid resistance (XAR) response
PCFPDMBM_00910	1.12e-76	erpA	-	-	C	ko:K15724	-	ko00000	iron--sulfur cluster insertion protein erpA
PCFPDMBM_00911	1.29e-141	yadS	-	-	S	-	-	-	membrane
PCFPDMBM_00912	1.3e-156	btuF	-	-	P	ko:K02016,ko:K06858	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Binds vitamin B12 and delivers it to the periplasmic surface of BtuC
PCFPDMBM_00913	8.31e-159	mtnN	3.2.2.9	-	F	ko:K01243	ko00270,ko01100,ko01230,map00270,map01100,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
PCFPDMBM_00914	0.0	dgt	3.1.5.1	-	F	ko:K01129	ko00230,map00230	ko00000,ko00001,ko01000	dGTPase preferentially hydrolyzes dGTP over the other canonical NTPs
PCFPDMBM_00915	8.91e-309	degP	1.3.1.74, 3.4.21.107	-	O	ko:K04771,ko:K04772,ko:K08070	ko01503,ko02020,map01503,map02020	ko00000,ko00001,ko00002,ko01000,ko01002,ko03110	Belongs to the peptidase S1C family
PCFPDMBM_00916	1.81e-273	cdaR	-	-	KT	ko:K02647	-	ko00000,ko03000	regulator
PCFPDMBM_00917	2.13e-88	yaeH	-	-	S	-	-	-	Belongs to the UPF0325 family
PCFPDMBM_00918	5.07e-174	dapD	2.3.1.117	-	E	ko:K00674	ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the transferase hexapeptide repeat family
PCFPDMBM_00919	0.0	glnD	2.7.7.59	-	O	ko:K00990	ko02020,map02020	ko00000,ko00001,ko01000	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
PCFPDMBM_00920	1.15e-190	map	3.4.11.18	-	E	ko:K01265	-	ko00000,ko01000,ko01002	Methionine aminopeptidase
PCFPDMBM_00921	1.23e-169	rpsB	-	-	J	ko:K02967	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	ribosomal protein
PCFPDMBM_00922	1.86e-185	tsf	-	-	J	ko:K02357	-	ko00000,ko03012,ko03029	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
PCFPDMBM_00923	2.9e-168	pyrH	2.7.4.22	-	F	ko:K09903	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphorylation of UMP to UDP
PCFPDMBM_00924	5.01e-105	frr	-	-	J	ko:K02838	-	ko00000,ko03012	Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
PCFPDMBM_00925	8.55e-270	dxr	1.1.1.267	-	I	ko:K00099	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP)
PCFPDMBM_00926	3.4e-177	uppS	2.5.1.31	-	H	ko:K00806	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) with (2E,6E)-farnesyl diphosphate (E,E-FPP) to yield (2Z,6Z,10Z,14Z,18Z,22Z,26Z,30Z,34E,38E)-undecaprenyl diphosphate (di-trans,octa-cis-UPP). UPP is the precursor of glycosyl carrier lipid in the biosynthesis of bacterial cell wall polysaccharide components such as peptidoglycan and lipopolysaccharide
PCFPDMBM_00927	1.92e-204	cdsA	2.7.7.41	-	S	ko:K00981	ko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070	ko00000,ko00001,ko00002,ko01000	Belongs to the CDS family
PCFPDMBM_00928	2.5e-313	rseP	-	-	M	ko:K11749	ko02024,ko04112,map02024,map04112	ko00000,ko00001,ko01000,ko01002	zinc metalloprotease
PCFPDMBM_00929	0.0	bamA	-	-	M	ko:K07277	-	ko00000,ko02000,ko03029	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
PCFPDMBM_00930	1.02e-96	skp	-	-	M	ko:K06142	-	ko00000	Belongs to the skp family
PCFPDMBM_00931	6.19e-197	lpxD	2.3.1.191	-	M	ko:K02536	ko00540,ko01100,map00540,map01100	ko00000,ko00001,ko00002,ko01000,ko01005	as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
PCFPDMBM_00932	1.92e-106	fabZ	4.2.1.59	-	I	ko:K02372	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
PCFPDMBM_00933	4.02e-142	lpxA	2.3.1.129	-	M	ko:K00677	ko00540,ko01100,ko01503,map00540,map01100,map01503	ko00000,ko00001,ko00002,ko01000,ko01005	Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
PCFPDMBM_00934	1.18e-272	lpxB	2.4.1.182	GT19	M	ko:K00748	ko00540,ko01100,map00540,map01100	ko00000,ko00001,ko00002,ko01000,ko01003,ko01005	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
PCFPDMBM_00935	1.52e-135	rnhB	3.1.26.4	-	L	ko:K03470	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PCFPDMBM_00936	0.0	dnaE	2.7.7.7	-	L	ko:K02337	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase
PCFPDMBM_00937	2.58e-226	accA	2.1.3.15, 6.4.1.2	-	I	ko:K01962	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002,ko01000	Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA
PCFPDMBM_00938	0.0	ldcC	4.1.1.18, 4.1.1.19	-	E	ko:K01582,ko:K01584	ko00310,ko00330,ko00960,ko01100,ko01110,map00310,map00330,map00960,map01100,map01110	ko00000,ko00001,ko00002,ko01000	decarboxylase
PCFPDMBM_00939	2.69e-91	yaeR	-	-	E	ko:K08234	-	ko00000	glyoxalase bleomycin resistance protein dioxygenase
PCFPDMBM_00940	4.6e-276	tilS	6.3.4.19	-	D	ko:K04075	-	ko00000,ko01000,ko03016	Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
PCFPDMBM_00941	3.2e-54	rof	-	-	K	ko:K19000	-	ko00000,ko03021	Suppresses temperature-sensitive mutations in essential genes by modulating rho-dependent transcription termination
PCFPDMBM_00942	5.79e-39	yaeP	-	-	S	-	-	-	Belongs to the UPF0253 family
PCFPDMBM_00943	2.68e-123	yaeQ	-	-	S	-	-	-	protein conserved in bacteria
PCFPDMBM_00944	4.4e-75	yaeJ	-	-	J	ko:K15034	-	ko00000,ko03012	PFAM Class I peptide chain release factor
PCFPDMBM_00945	6.44e-147	cutF	-	-	MP	ko:K06079	ko01503,map01503	ko00000,ko00001	Copper homeostasis
PCFPDMBM_00946	1.63e-133	yaeF	-	-	M	-	-	-	cysteine-type peptidase activity
PCFPDMBM_00947	0.0	proS	6.1.1.15	-	J	ko:K01881	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
PCFPDMBM_00948	2.57e-159	yaeB	-	-	P	-	-	-	PFAM Uncharacterised protein family UPF0066
PCFPDMBM_00949	1.72e-85	rcsF	-	-	M	ko:K06080	ko02020,map02020	ko00000,ko00001	Essential component of the Rcs signaling system, which controls transcription of numerous genes. Plays a role in signal transduction from the cell surface to the histidine kinase RcsC. May detect outer membrane defects
PCFPDMBM_00950	3.14e-187	metQ	-	-	P	ko:K02072,ko:K02073	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the NlpA lipoprotein family
PCFPDMBM_00951	5.05e-116	metI	-	-	P	ko:K02072	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC-type metal ion transport system permease component
PCFPDMBM_00952	1.81e-229	metN	-	-	P	ko:K02071	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
PCFPDMBM_00953	2.47e-136	gmhB	3.1.3.82, 3.1.3.83	-	E	ko:K03273	ko00540,ko01100,map00540,map01100	ko00000,ko00001,ko00002,ko01000,ko01005	D,D-heptose 1,7-bisphosphate phosphatase
PCFPDMBM_00955	5.21e-41	yecF	-	-	S	-	-	-	Protein of unknown function (DUF2594)
PCFPDMBM_00956	2.9e-150	sdiA	-	-	K	ko:K07782,ko:K15852,ko:K19666,ko:K19734	ko02020,ko02024,ko02026,map02020,map02024,map02026	ko00000,ko00001,ko03000	Transcriptional regulator
PCFPDMBM_00957	1.17e-167	yecC	3.6.3.21	-	E	ko:K02028,ko:K02029,ko:K09972,ko:K10004,ko:K10010,ko:K10038	ko02010,ko02020,map02010,map02020	ko00000,ko00001,ko00002,ko01000,ko02000	(ABC) transporter
PCFPDMBM_00958	1.67e-144	yecS	-	-	P	ko:K02029,ko:K10009	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	amino acid ABC transporter
PCFPDMBM_00959	7.37e-226	dcyD	4.4.1.15	-	E	ko:K05396	ko00270,map00270	ko00000,ko00001,ko01000	Catalyzes the alpha,beta-elimination reaction of D- cysteine and of several D-cysteine derivatives. It could be a defense mechanism against D-cysteine
PCFPDMBM_00960	1.69e-172	fliY	-	-	ET	ko:K02424	ko02010,map02010	ko00000,ko00001,ko00002,ko02000,ko02035	belongs to the bacterial solute-binding protein 3 family
PCFPDMBM_00961	2.2e-123	fliZ	-	-	N	ko:K02425	ko02026,map02026	ko00000,ko00001,ko02035	biosynthesis protein FliZ
PCFPDMBM_00962	2.2e-162	fliA	-	-	K	ko:K02405	ko02020,ko02025,ko02026,ko02040,ko05111,map02020,map02025,map02026,map02040,map05111	ko00000,ko00001,ko02035,ko03021	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes
PCFPDMBM_00963	1.18e-162	fliC	-	-	N	ko:K02406	ko02020,ko02040,ko04621,ko04626,ko05132,ko05134,map02020,map02040,map04621,map04626,map05132,map05134	ko00000,ko00001,ko02035	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
PCFPDMBM_00964	2.42e-241	fliD	-	-	N	ko:K02407	ko02040,map02040	ko00000,ko00001,ko02035	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
PCFPDMBM_00965	7.5e-81	fliS	-	-	N	ko:K02422	ko02040,map02040	ko00000,ko00001,ko02035	flagellar protein FliS
PCFPDMBM_00966	3.91e-59	fliT	-	-	N	ko:K02423	ko02040,map02040	ko00000,ko00001,ko02035	Flagellar protein FliT
PCFPDMBM_00967	0.0	amyA	3.2.1.1	GH13	G	ko:K01176	ko00500,ko01100,ko04973,map00500,map01100,map04973	ko00000,ko00001,ko01000	Cytoplasmic alpha-amylase
PCFPDMBM_00968	2.24e-87	yedD	-	-	S	-	-	-	Lipoprotein
PCFPDMBM_00969	2.66e-59	fliE	-	-	N	ko:K02408	ko02040,map02040	ko00000,ko00001,ko02035	Flagellar hook-basal body complex protein FliE
PCFPDMBM_00970	0.0	fliF	-	-	N	ko:K02409	ko02040,map02040	ko00000,ko00001,ko02035,ko02044	The M ring may be actively involved in energy transduction
PCFPDMBM_00971	6.27e-224	fliG	-	-	N	ko:K02410	ko02030,ko02040,map02030,map02040	ko00000,ko00001,ko02035	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
PCFPDMBM_00972	9.05e-121	fliH	-	-	N	ko:K02411	ko02040,map02040	ko00000,ko00001,ko02035,ko02044	Flagellar assembly protein
PCFPDMBM_00973	0.0	fliI	3.6.3.14	-	NU	ko:K02412	ko02040,map02040	ko00000,ko00001,ko01000,ko02035,ko02044	Type III
PCFPDMBM_00974	1.64e-87	fliJ	-	-	N	ko:K02413	ko02040,map02040	ko00000,ko00001,ko02035	Flagellar protein that affects chemotactic events
PCFPDMBM_00975	6.32e-198	fliK	-	-	N	ko:K02414	ko02040,map02040	ko00000,ko00001,ko02035	Flagellar hook-length control protein
PCFPDMBM_00976	3.02e-96	fliL	-	-	N	ko:K02415	-	ko00000,ko02035	Controls the rotational direction of flagella during chemotaxis
PCFPDMBM_00977	2.73e-240	fliM	-	-	N	ko:K02416	ko02030,ko02040,map02030,map02040	ko00000,ko00001,ko02035	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
PCFPDMBM_00978	1.58e-87	fliN	-	-	N	ko:K02417	ko02030,ko02040,map02030,map02040	ko00000,ko00001,ko02035,ko02044	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
PCFPDMBM_00979	2.32e-67	fliO	-	-	N	ko:K02418	ko02040,map02040	ko00000,ko00001,ko02035,ko02044	flagellar
PCFPDMBM_00980	3.73e-157	fliP	-	-	N	ko:K02419	ko02040,map02040	ko00000,ko00001,ko02035,ko02044	Plays a role in the flagellum-specific transport system
PCFPDMBM_00981	1.82e-50	fliQ	-	-	N	ko:K02420	ko02040,map02040	ko00000,ko00001,ko02035,ko02044	Flagellar biosynthetic protein FliQ
PCFPDMBM_00982	5.61e-160	fliR	-	-	N	ko:K02421	ko02040,map02040	ko00000,ko00001,ko02035,ko02044	flagellar biosynthetic protein FliR
PCFPDMBM_00983	7.75e-138	rcsA	-	-	K	ko:K07781	ko02020,ko02024,ko02026,map02020,map02024,map02026	ko00000,ko00001,ko03000	Component of the Rcs signaling system, which controls transcription of numerous genes. Binds to DNA to regulate expression of genes
PCFPDMBM_00984	4.24e-37	dsrB	-	-	S	-	-	-	Belongs to the DsrB family
PCFPDMBM_00985	1e-43	yodD	-	-	S	-	-	-	single-species biofilm formation on inanimate substrate
PCFPDMBM_00986	3.98e-169	yedP	2.7.1.31, 3.1.3.70	-	S	ko:K07026,ko:K15918	ko00051,ko00260,ko00561,ko00630,ko01100,ko01110,ko01130,ko01200,map00051,map00260,map00561,map00630,map01100,map01110,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Mannosyl-3-phosphoglycerate phosphatase
PCFPDMBM_00987	6.86e-287	yedQ	2.7.7.65	-	T	ko:K21085	ko02026,map02026	ko00000,ko00001,ko01000	Protein involved in phosphorus-oxygen lyase activity, regulation of signal transduction, cyclic nucleotide biosynthetic process and intracellular signal transduction
PCFPDMBM_00988	3.04e-36	yodC	-	-	S	-	-	-	Uncharacterized small protein (DUF2158)
PCFPDMBM_00989	1.79e-171	yedI	-	-	S	ko:K09781	-	ko00000	protein conserved in bacteria
PCFPDMBM_00990	3.19e-192	yedA	-	-	EG	-	-	-	of the drug metabolite transporter (DMT) superfamily
PCFPDMBM_00991	7.33e-110	vsr	-	-	L	ko:K07458	-	ko00000,ko01000,ko03400	May nick specific sequences that contain T G mispairs resulting from m5C-deamination
PCFPDMBM_00992	0.0	dcm	2.1.1.37	-	H	ko:K00558	ko00270,ko01100,ko05206,map00270,map01100,map05206	ko00000,ko00001,ko00002,ko01000,ko02048,ko03032,ko03036	Methyl-transferase
PCFPDMBM_00993	5.85e-138	yedJ	-	-	S	ko:K06950	-	ko00000	Metal-dependent phosphohydrolase
PCFPDMBM_00994	1.34e-41	yedR	-	-	-	-	-	-	-
PCFPDMBM_00995	7.92e-231	-	-	-	M	ko:K09476	ko01501,ko02020,map01501,map02020	ko00000,ko00001,ko00002,ko01504,ko02000	Gram-negative porin
PCFPDMBM_00996	0.0	dcuS	2.7.13.3	-	T	ko:K02476,ko:K07701,ko:K11614	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	signal transduction histidine kinase regulating citrate malate metabolism
PCFPDMBM_00997	3.34e-158	dcuR	-	-	K	ko:K02475,ko:K07703,ko:K11615	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	Transcriptional Regulatory protein
PCFPDMBM_00999	5.05e-190	mtfA	-	-	C	ko:K09933	-	ko00000,ko01002	Belongs to the MtfA family
PCFPDMBM_01001	1.76e-13	intB	-	-	L	-	-	-	Belongs to the 'phage' integrase family
PCFPDMBM_01002	5.82e-16	intB	-	-	L	-	-	-	Belongs to the 'phage' integrase family
PCFPDMBM_01003	8.76e-63	VY92_04820	-	-	K	-	-	-	Helix-turn-helix domain
PCFPDMBM_01004	7.46e-72	-	-	-	S	-	-	-	Phage derived protein Gp49-like (DUF891)
PCFPDMBM_01005	8.22e-34	-	-	-	K	ko:K07724	-	ko00000,ko03000	transcriptional regulator
PCFPDMBM_01006	1.55e-72	-	-	-	-	-	-	-	-
PCFPDMBM_01007	3.25e-120	-	-	-	T	-	-	-	Nacht domain
PCFPDMBM_01008	1.42e-122	-	-	-	T	-	-	-	Nacht domain
PCFPDMBM_01009	0.0	-	-	-	-	-	-	-	-
PCFPDMBM_01010	0.0	-	-	-	-	-	-	-	-
PCFPDMBM_01011	4.82e-185	-	-	-	-	-	-	-	-
PCFPDMBM_01012	3.11e-221	cbl	-	-	K	ko:K13634,ko:K13635	-	ko00000,ko03000	transcriptional regulator
PCFPDMBM_01013	2.77e-198	nac	-	-	K	ko:K19338	-	ko00000,ko03000	transcriptional regulator
PCFPDMBM_01015	1.71e-200	erfK	-	-	S	ko:K16291	-	ko00000,ko01002,ko01011	Catalyzes th removal of D-alanine and attachment of the murein lipoprotein to the peptidoglycan tetrapeptide chain
PCFPDMBM_01016	1.69e-295	shiA	-	-	EGP	ko:K08172	-	ko00000,ko02000	Major facilitator superfamily
PCFPDMBM_01017	0.0	amn	3.2.2.4	-	F	ko:K01241	ko00230,map00230	ko00000,ko00001,ko01000	Catalyzes the hydrolysis of the N-glycosidic bond of AMP to form adenine and ribose 5-phosphate. Involved in regulation of AMP concentrations
PCFPDMBM_01018	0.0	ampP	3.4.11.9	-	E	ko:K01262	-	ko00000,ko01000,ko01002	xaa-pro aminopeptidase
PCFPDMBM_01020	0.0	yeeO	-	-	V	-	-	-	Mate efflux family protein
PCFPDMBM_01022	1.49e-66	yeeX	-	-	S	ko:K09802	-	ko00000	Belongs to the UPF0265 family
PCFPDMBM_01023	8.88e-246	yeeA	-	-	S	-	-	-	Membrane
PCFPDMBM_01024	7.43e-107	sbmC	-	-	L	ko:K07470	-	ko00000	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
PCFPDMBM_01025	5.25e-279	dacA	3.4.16.4	-	M	ko:K07258	ko00550,ko01100,map00550,map01100	ko00000,ko00001,ko01000,ko01002,ko01011	Belongs to the peptidase S11 family
PCFPDMBM_01026	0.0	sbcB	3.1.11.1	-	L	ko:K01141	ko03430,map03430	ko00000,ko00001,ko01000,ko03400	Exonucleolytic cleavage in the 3'- to 5'-direction to yield nucleoside 5'-phosphates
PCFPDMBM_01027	9.2e-317	yeeF	-	-	E	ko:K14052	-	ko00000,ko02000	PFAM amino acid permease-associated region
PCFPDMBM_01028	3.68e-205	yeeY	-	-	K	-	-	-	transcriptional regulator
PCFPDMBM_01029	4.66e-193	yeeZ	-	-	GM	-	-	-	COG0451 Nucleoside-diphosphate-sugar epimerases
PCFPDMBM_01030	2.63e-209	hisG	2.4.2.17	-	F	ko:K00765	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity
PCFPDMBM_01031	1.66e-287	hisD	1.1.1.23	-	E	ko:K00013	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
PCFPDMBM_01032	8.43e-240	hisC	2.6.1.9	-	E	ko:K00817	ko00340,ko00350,ko00360,ko00400,ko00401,ko00960,ko01100,ko01110,ko01130,ko01230,map00340,map00350,map00360,map00400,map00401,map00960,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
PCFPDMBM_01033	1.14e-254	hisB	3.1.3.15, 4.2.1.19	-	E	ko:K01089,ko:K01693	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Histidine biosynthesis bifunctional protein HisB
PCFPDMBM_01034	4.75e-138	hisH	-	-	E	ko:K02501	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
PCFPDMBM_01035	5.61e-168	hisA	5.3.1.16	-	E	ko:K01814	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
PCFPDMBM_01036	1.29e-184	hisF	-	-	E	ko:K01663,ko:K02500	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
PCFPDMBM_01037	1.78e-141	hisI	3.5.4.19, 3.6.1.31	-	E	ko:K11755	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
PCFPDMBM_01038	4.92e-191	wzzB	-	-	M	ko:K05789	-	ko00000,ko01005	chain length
PCFPDMBM_01039	2.73e-240	wbnF	5.1.3.25, 5.1.3.6	-	M	ko:K08679,ko:K17947	ko00520,ko00523,ko01100,ko01130,map00520,map00523,map01100,map01130	ko00000,ko00001,ko01000	epimerase dehydratase
PCFPDMBM_01040	1.15e-261	ugd	1.1.1.22	-	M	ko:K00012	ko00040,ko00053,ko00520,ko01100,map00040,map00053,map00520,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
PCFPDMBM_01041	0.0	gnd	1.1.1.343, 1.1.1.44	-	H	ko:K00033	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
PCFPDMBM_01042	5.82e-169	galE	5.1.3.2	-	M	ko:K01784	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000	Polysaccharide biosynthesis protein
PCFPDMBM_01043	1.65e-179	-	-	GT4	M	ko:K13004,ko:K21011	ko02025,map02025	ko00000,ko00001,ko01000,ko01003,ko01005	to RfpB of Escherichia coli UniRef RepID B3I2Q7_ECOLX
PCFPDMBM_01044	1.08e-121	-	-	-	M	-	-	-	Glycosyl transferase 4-like
PCFPDMBM_01045	5.74e-57	-	-	-	M	-	-	-	Glycosyltransferase like family 2
PCFPDMBM_01046	2.55e-56	-	-	-	M	-	-	-	Glycosyl transferase family 2
PCFPDMBM_01047	2.12e-20	-	-	-	-	-	-	-	-
PCFPDMBM_01048	1.41e-138	-	-	-	S	-	-	-	Polysaccharide biosynthesis protein
PCFPDMBM_01049	5.86e-196	rfbA	2.7.7.24	-	H	ko:K00973	ko00521,ko00523,ko00525,ko01130,map00521,map00523,map00525,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
PCFPDMBM_01050	5.34e-193	rfbD	1.1.1.133	-	M	ko:K00067	ko00521,ko00523,ko01130,map00521,map00523,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
PCFPDMBM_01051	1.09e-265	rfbB	4.2.1.46	-	M	ko:K01710	ko00521,ko00523,ko00525,ko01055,ko01130,map00521,map00523,map00525,map01055,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
PCFPDMBM_01052	1.11e-205	galF	2.7.7.9	-	M	ko:K00963	ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	UTP-glucose-1-phosphate uridylyltransferase
PCFPDMBM_01053	2.2e-308	wcaM	-	-	S	ko:K16711	-	ko00000	colanic acid biosynthesis protein
PCFPDMBM_01054	8.5e-285	wcaL	-	GT4	M	ko:K16703	-	ko00000,ko01000,ko01003	Glycosyl Transferase
PCFPDMBM_01055	7.92e-307	wcaK	-	-	S	ko:K16710	-	ko00000	biosynthesis protein
PCFPDMBM_01056	0.0	wzxC	-	-	S	ko:K03328,ko:K16695	-	ko00000,ko02000	Membrane protein involved in the export of O-antigen and teichoic acid
PCFPDMBM_01057	0.0	wcaJ	-	-	M	ko:K03606	ko05111,map05111	ko00000,ko00001	COG2148 Sugar transferases involved in lipopolysaccharide synthesis
PCFPDMBM_01058	0.0	manB	5.4.2.8	-	G	ko:K01840	ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	phosphomannomutase
PCFPDMBM_01059	0.0	cpsB	2.7.7.13, 5.3.1.8	-	GM	ko:K00971,ko:K16011	ko00051,ko00520,ko01100,ko01110,ko01130,ko02025,map00051,map00520,map01100,map01110,map01130,map02025	ko00000,ko00001,ko00002,ko01000	Belongs to the mannose-6-phosphate isomerase type 2 family
PCFPDMBM_01060	1.28e-275	wcaI	-	GT4	M	ko:K03208	-	ko00000	glycosyl transferase group 1
PCFPDMBM_01061	1.41e-104	gmm	-	-	F	ko:K03207	-	ko00000,ko01000	Belongs to the Nudix hydrolase family
PCFPDMBM_01062	6.34e-228	fcl	1.1.1.271	-	GM	ko:K02377	ko00051,ko00520,ko01100,map00051,map00520,map01100	ko00000,ko00001,ko01000	Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction
PCFPDMBM_01063	2.65e-269	gmd	4.2.1.47	-	M	ko:K01711	ko00051,ko00520,ko01100,map00051,map00520,map01100	ko00000,ko00001,ko01000	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
PCFPDMBM_01064	1.14e-129	wcaF	-	-	S	ko:K03818	-	ko00000,ko01000	colanic acid biosynthesis acetyltransferase wcaF
PCFPDMBM_01065	8.25e-167	wcaE	-	GT2	M	ko:K13683	-	ko00000,ko01000,ko01003	Pfam Glycosyl transferase family 2
PCFPDMBM_01066	1.13e-273	wcaD	-	-	S	ko:K13620	-	ko00000	colanic acid is an exopolysaccharide produced under stress conditions that confers acid and heat tolerance
PCFPDMBM_01067	3.48e-288	wcaC	-	GT4	M	ko:K13684	-	ko00000,ko01000,ko01003	Glycosyl Transferase
PCFPDMBM_01068	4.57e-104	wcaB	-	-	E	ko:K03819	-	ko00000,ko01000	Belongs to the transferase hexapeptide repeat family
PCFPDMBM_01069	6.4e-193	wcaA	-	-	M	-	-	-	PFAM Glycosyl transferase, family 2
PCFPDMBM_01070	0.0	wzc	-	-	D	ko:K16692	-	ko00000,ko01000,ko01001	protein involved in exopolysaccharide biosynthesis
PCFPDMBM_01071	3.1e-101	wzb	3.1.3.48	-	T	ko:K01104,ko:K20945	ko05111,map05111	ko00000,ko00001,ko01000	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
PCFPDMBM_01072	2.17e-266	wza	-	-	M	ko:K01991	ko02026,map02026	ko00000,ko00001,ko02000	polysaccharide export
PCFPDMBM_01073	0.0	yegH	-	-	P	-	-	-	membrane protein, terc
PCFPDMBM_01074	0.0	asmA	-	-	M	ko:K07289	-	ko00000	Protein involved in outer membrane biogenesis
PCFPDMBM_01075	3.1e-137	dcd	3.5.4.13	-	F	ko:K01494	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the dCTP deaminase family
PCFPDMBM_01076	1.83e-148	udk	2.7.1.19, 2.7.1.48	-	F	ko:K00855,ko:K00876	ko00240,ko00710,ko00983,ko01100,ko01120,ko01200,map00240,map00710,map00983,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Cytidine monophosphokinase
PCFPDMBM_01077	0.0	yegE	2.7.7.65	-	T	ko:K21084	ko02026,map02026	ko00000,ko00001,ko01000	Diguanylate cyclase
PCFPDMBM_01078	6.13e-198	alkA	3.2.2.21	-	L	ko:K01247,ko:K13529	ko03410,map03410	ko00000,ko00001,ko01000,ko03000,ko03400	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
PCFPDMBM_01079	0.0	yegD	-	-	O	ko:K04046	-	ko00000,ko03110	Belongs to the heat shock protein 70 family
PCFPDMBM_01080	2.43e-254	mdtA	-	-	M	ko:K07799,ko:K21135	ko02020,map02020	ko00000,ko00001,ko00002,ko02000	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PCFPDMBM_01081	0.0	mdtB	-	-	V	ko:K07788	ko02020,map02020	ko00000,ko00001,ko00002,ko02000	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PCFPDMBM_01082	0.0	mdtC	-	-	V	ko:K07789	ko02020,map02020	ko00000,ko00001,ko00002,ko02000	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PCFPDMBM_01083	3.52e-310	mdtD	-	-	EGP	ko:K18326	ko02020,map02020	ko00000,ko00001,ko02000	Major facilitator superfamily
PCFPDMBM_01084	0.0	baeS	2.7.13.3	-	T	ko:K07642	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
PCFPDMBM_01085	2.13e-170	baeR	-	-	K	ko:K07664,ko:K18144	ko01501,ko02020,map01501,map02020	ko00000,ko00001,ko00002,ko01504,ko02022	response regulator
PCFPDMBM_01086	3.72e-158	ycgE	-	-	K	ko:K21089,ko:K21972,ko:K22491	ko02026,map02026	ko00000,ko00001,ko03000	Transcriptional regulator
PCFPDMBM_01087	8.68e-262	ycgF	-	-	T	ko:K21973	-	ko00000	EAL domain
PCFPDMBM_01088	9.33e-44	ycgZ	-	-	S	ko:K21974	-	ko00000	Two-component-system connector protein YcgZ
PCFPDMBM_01089	2.26e-49	-	-	-	-	ko:K21975	-	ko00000	-
PCFPDMBM_01090	2.33e-42	ariR	-	-	S	ko:K21976	-	ko00000	Two-component-system connector protein AriR
PCFPDMBM_01091	0.0	yegQ	-	-	O	ko:K08303	ko05120,map05120	ko00000,ko00001,ko01000,ko01002	protease
PCFPDMBM_01092	6.51e-194	yegS	-	-	I	-	-	-	the in vivo substrate is
PCFPDMBM_01093	3.37e-175	-	-	-	EP	ko:K02032	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	(ABC) transporter
PCFPDMBM_01094	1.28e-197	-	-	-	EP	ko:K02031	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	(ABC) transporter
PCFPDMBM_01095	4.87e-206	-	-	-	P	ko:K02034	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport systems inner membrane component
PCFPDMBM_01096	1.89e-232	dppB_1	-	-	P	ko:K02033	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	PFAM binding-protein-dependent transport systems inner membrane component
PCFPDMBM_01097	0.0	-	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Extracellular solute-binding protein, family 5
PCFPDMBM_01098	1.36e-288	-	-	-	M	-	-	-	Belongs to the mandelate racemase muconate lactonizing enzyme family
PCFPDMBM_01099	1.23e-251	fbaB	4.1.2.13	-	G	ko:K11645	ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of glycerone phosphate and D-glyceraldehyde 3-phosphate from D-fructose 1,6-bisphosphate
PCFPDMBM_01100	2.02e-176	thiD	2.7.1.49, 2.7.4.7	-	H	ko:K00941	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	phosphomethylpyrimidine kinase
PCFPDMBM_01101	3.43e-163	thiM	2.7.1.50	-	H	ko:K00878	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
PCFPDMBM_01105	2.36e-152	-	-	-	L	-	-	-	Reverse transcriptase (RNA-dependent DNA polymerase)
PCFPDMBM_01106	4.02e-84	-	-	-	L	-	-	-	Resolvase, N terminal domain
PCFPDMBM_01107	2.76e-40	-	-	-	-	-	-	-	-
PCFPDMBM_01108	4.4e-19	-	-	-	-	-	-	-	-
PCFPDMBM_01109	2.93e-20	-	-	-	-	-	-	-	-
PCFPDMBM_01110	2.76e-56	-	-	-	-	-	-	-	-
PCFPDMBM_01111	0.0	-	-	-	NU	ko:K07347	ko05133,map05133	ko00000,ko00001,ko02000,ko02035,ko02044	Usher protein
PCFPDMBM_01112	2.38e-117	-	-	-	NU	-	-	-	Fimbrial protein
PCFPDMBM_01113	1.61e-46	-	-	-	NU	ko:K07349	-	ko00000,ko02035,ko02044	Fimbrial protein
PCFPDMBM_01114	1.98e-69	-	-	-	K	ko:K07687	ko02020,ko02026,map02020,map02026	ko00000,ko00001,ko00002,ko02022	LuxR family transcriptional regulator
PCFPDMBM_01115	5.91e-58	-	-	-	K	ko:K07687	ko02020,ko02026,map02020,map02026	ko00000,ko00001,ko00002,ko02022	response regulator
PCFPDMBM_01116	0.0	gor	1.8.1.7	-	C	ko:K00383	ko00480,ko04918,map00480,map04918	ko00000,ko00001,ko01000	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
PCFPDMBM_01117	9.45e-198	rlmJ	2.1.1.266	-	S	ko:K07115	-	ko00000,ko01000,ko03009	Specifically methylates the adenine in position 2030 of 23S rRNA
PCFPDMBM_01118	0.0	prlC	3.4.24.70	-	E	ko:K01414	-	ko00000,ko01000,ko01002	oligopeptidase
PCFPDMBM_01119	1.49e-171	rsmJ	2.1.1.242	-	J	ko:K15984	-	ko00000,ko01000,ko03009	Specifically methylates the guanosine in position 1516 of 16S rRNA
PCFPDMBM_01120	3e-98	uspA	-	-	T	ko:K06149	-	ko00000	Required for resistance to DNA-damaging agents
PCFPDMBM_01121	2.11e-75	uspB	-	-	S	ko:K06144	-	ko00000,ko02000	Universal stress protein B
PCFPDMBM_01122	0.0	pitA	-	-	P	ko:K03306,ko:K16322	-	ko00000,ko02000	phosphate transporter
PCFPDMBM_01123	2.72e-286	yhiN	-	-	S	ko:K07007	-	ko00000	HI0933 family
PCFPDMBM_01124	3.57e-68	-	-	-	P	-	-	-	Ion channel
PCFPDMBM_01125	2.5e-235	terC	-	-	P	ko:K05794	-	ko00000	membrane protein, terc
PCFPDMBM_01126	2.6e-156	cicA	-	-	E	-	-	-	Hydrolase
PCFPDMBM_01127	5.54e-173	-	-	-	IQ	-	-	-	Belongs to the short-chain dehydrogenases reductases (SDR) family
PCFPDMBM_01128	1.04e-161	-	-	-	K	-	-	-	LysR substrate binding domain
PCFPDMBM_01129	2.17e-118	padC	-	-	Q	ko:K13727	-	ko00000,ko01000	Phenolic acid decarboxylase (PAD)
PCFPDMBM_01130	6.67e-123	acpT	-	-	H	ko:K06133	ko00770,map00770	ko00000,ko00001,ko01000	Belongs to the P-Pant transferase superfamily
PCFPDMBM_01131	1.85e-30	fabF1	2.3.1.179	-	H	ko:K09458	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Belongs to the beta-ketoacyl-ACP synthases family
PCFPDMBM_01132	3.37e-232	yhhT	-	-	T	ko:K11744	-	ko00000	permease
PCFPDMBM_01133	6.69e-266	yhhS	-	-	EGP	-	-	-	MFS-type transporter
PCFPDMBM_01134	2.87e-120	dcrB	-	-	S	-	-	-	dcrb protein
PCFPDMBM_01135	1.68e-148	yhhQ	-	-	U	ko:K09125	-	ko00000	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
PCFPDMBM_01136	1.99e-50	tusA	-	-	J	ko:K04085	ko04122,map04122	ko00000,ko00001,ko01000,ko03016	Sulfur carrier protein involved in sulfur trafficking in the cell. Part of a sulfur-relay system required for 2-thiolation during synthesis of 2-thiouridine of the modified wobble base 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) in tRNA. Interacts with IscS and stimulates its cysteine desulfurase activity. Accepts an activated sulfur from IscS, which is then transferred to TusD, and thus determines the direction of sulfur flow from IscS to 2-thiouridine formation. Also appears to be involved in sulfur transfer for the biosynthesis of molybdopterin
PCFPDMBM_01137	1.87e-221	dctP	-	-	G	-	-	-	Bacterial extracellular solute-binding protein, family 7
PCFPDMBM_01138	5.72e-110	dctQ	-	-	G	-	-	-	Tripartite ATP-independent periplasmic transporter, DctQ
PCFPDMBM_01139	9.69e-277	dctM	-	-	G	-	-	-	TRAP-type C4-dicarboxylate transport system, large permease component
PCFPDMBM_01140	0.0	zntA	3.6.3.3, 3.6.3.5	-	P	ko:K01534	-	ko00000,ko01000	P-type atpase
PCFPDMBM_01141	1.51e-140	yhhN	-	-	S	-	-	-	YhhN family
PCFPDMBM_01142	3.54e-48	yhhM	-	-	S	-	-	-	Protein of unknown function (DUF2500)
PCFPDMBM_01143	3.43e-59	yhhL	-	-	S	ko:K08993	-	ko00000	Protein of unknown function (DUF1145)
PCFPDMBM_01144	2.25e-138	rsmD	2.1.1.171	-	L	ko:K08316	-	ko00000,ko01000,ko03009	Specifically methylates the guanine in position 966 of 16S rRNA in the assembled 30S particle
PCFPDMBM_01145	5.09e-280	ftsY	-	-	U	ko:K03110	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components
PCFPDMBM_01146	8.06e-156	ftsE	-	-	D	ko:K09812	ko02010,map02010	ko00000,ko00001,ko00002,ko02000,ko03036	cell division ATP-binding protein FtsE
PCFPDMBM_01147	2.5e-236	ftsX	-	-	D	ko:K09811	ko02010,map02010	ko00000,ko00001,ko00002,ko02000,ko03036	Part of the ABC transporter FtsEX involved in cellular division
PCFPDMBM_01148	5.91e-199	rpoH	-	-	K	ko:K03089	-	ko00000,ko03021	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes
PCFPDMBM_01149	1.62e-256	livJ	-	-	E	ko:K01999	ko02010,ko02024,map02010,map02024	ko00000,ko00001,ko00002,ko02000	With LivFGHM is involved in the high affinity leucine transport
PCFPDMBM_01151	1.02e-247	-	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
PCFPDMBM_01152	1.18e-170	-	-	-	S	-	-	-	Oxidoreductase family, C-terminal alpha/beta domain
PCFPDMBM_01153	6.36e-98	-	-	-	O	-	-	-	peptidase U32
PCFPDMBM_01154	7.6e-82	-	-	-	K	ko:K03482,ko:K03710	-	ko00000,ko03000	Transcriptional regulator
PCFPDMBM_01155	8.66e-77	panZ	-	-	K	-	-	-	Controls both the activation and catalytic activity of PanD in a coenzyme A (CoA)-dependent fashion
PCFPDMBM_01156	4e-257	livK	-	-	E	ko:K01999	ko02010,ko02024,map02010,map02024	ko00000,ko00001,ko00002,ko02000	With LivFGHM is involved in the high affinity leucine transport
PCFPDMBM_01157	1.55e-201	livH	-	-	P	ko:K01997	ko02010,ko02024,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
PCFPDMBM_01158	3.5e-289	livM	-	-	E	ko:K01998	ko02010,ko02024,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
PCFPDMBM_01159	3.82e-180	livG	-	-	E	ko:K01995	ko02010,ko02024,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Part of the ABC transporter complexes LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids
PCFPDMBM_01160	1.55e-161	livF	-	-	P	ko:K01996	ko02010,ko02024,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Branched-chain amino acid transport
PCFPDMBM_01161	2.05e-42	-	-	-	D	ko:K19165	-	ko00000,ko02048	Antitoxin component of a toxin-antitoxin (TA) module
PCFPDMBM_01162	7.9e-74	doc	-	-	S	ko:K07341	-	ko00000,ko02048	Death ON curing protein
PCFPDMBM_01163	0.0	ugpB	-	-	G	ko:K05813	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding protein
PCFPDMBM_01164	6.63e-201	ugpA	-	-	P	ko:K05814	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	With UgpEC is involved in the uptake of glycerol-3-phosphate
PCFPDMBM_01165	8.63e-190	ugpE	-	-	P	ko:K05815	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	probably responsible for the translocation of the substrate across the membrane
PCFPDMBM_01166	1.44e-253	ugpC	3.6.3.20	-	P	ko:K05816	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex UgpABCE involved in sn-glycerol-3-phosphate import. Responsible for energy coupling to the transport system
PCFPDMBM_01167	2.2e-170	ugpQ	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	glycerophosphoryl diester phosphodiesterase
PCFPDMBM_01168	1.5e-43	yhhA	-	-	S	-	-	-	Protein of unknown function (DUF2756)
PCFPDMBM_01169	0.0	ggt	2.3.2.2, 3.4.19.13	-	M	ko:K00681	ko00430,ko00460,ko00480,ko01100,map00430,map00460,map00480,map01100	ko00000,ko00001,ko01000,ko01002	Gamma-glutamyltransferase
PCFPDMBM_01170	1.2e-94	speG_2	-	-	K	ko:K03825	-	ko00000,ko01000	PFAM GCN5-related N-acetyltransferase
PCFPDMBM_01171	2.69e-69	-	-	-	M	-	-	-	COG1664 Integral membrane protein CcmA involved in cell shape determination
PCFPDMBM_01172	1.26e-246	yhhX	-	-	S	-	-	-	oxidoreductase
PCFPDMBM_01173	4.87e-171	yhhW	-	-	S	ko:K06911	-	ko00000	Belongs to the pirin family
PCFPDMBM_01174	2.73e-234	gntR	-	-	K	ko:K06145	-	ko00000,ko03000	Periplasmic binding protein LacI transcriptional regulator
PCFPDMBM_01175	6.65e-121	gntK	2.7.1.12	-	F	ko:K00851	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko01000	Gluconokinase
PCFPDMBM_01176	9.97e-294	gntU	-	-	EG	ko:K06156	-	ko00000,ko02000	Gluconate
PCFPDMBM_01177	7.74e-124	yhgN	-	-	U	ko:K05595	-	ko00000,ko02000	UPF0056 membrane protein
PCFPDMBM_01178	9.6e-269	asd	1.2.1.11	-	E	ko:K00133	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
PCFPDMBM_01179	0.0	glgB	2.4.1.18	CBM48,GH13	G	ko:K00700	ko00500,ko01100,ko01110,map00500,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
PCFPDMBM_01180	0.0	glgX	3.2.1.196, 3.2.1.41, 3.2.1.68	CBM48,GH13	G	ko:K01200,ko:K01214,ko:K02438	ko00500,ko01100,ko01110,map00500,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Belongs to the glycosyl hydrolase 13 family
PCFPDMBM_01181	6.4e-313	glgC	2.7.7.27	-	H	ko:K00975	ko00500,ko00520,ko01100,ko01110,ko02026,map00500,map00520,map01100,map01110,map02026	ko00000,ko00001,ko00002,ko01000	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
PCFPDMBM_01182	0.0	glgA	2.4.1.21	GT5	G	ko:K00703	ko00500,ko01100,ko01110,ko02026,map00500,map01100,map01110,map02026	ko00000,ko00001,ko00002,ko01000,ko01003	Synthesizes alpha-1,4-glucan chains using ADP-glucose
PCFPDMBM_01183	0.0	glgP	2.4.1.1	GT35	G	ko:K00688	ko00500,ko01100,ko01110,ko02026,ko04217,ko04910,ko04922,ko04931,map00500,map01100,map01110,map02026,map04217,map04910,map04922,map04931	ko00000,ko00001,ko01000	Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
PCFPDMBM_01184	0.0	glpD	1.1.5.3	-	C	ko:K00111	ko00564,ko01110,map00564,map01110	ko00000,ko00001,ko01000	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
PCFPDMBM_01185	1.05e-74	glpE	2.8.1.1	-	P	ko:K02439	ko00920,ko01110,ko01120,map00920,map01110,map01120	ko00000,ko00001,ko01000	Catalyzes, although with low efficiency, the sulfur transfer reaction from thiosulfate to cyanide
PCFPDMBM_01186	4.68e-196	glpG	-	-	S	ko:K02441	-	ko00000	Rhomboid-type serine protease that catalyzes intramembrane proteolysis
PCFPDMBM_01187	5.4e-174	glpR	-	-	K	ko:K02444	-	ko00000,ko03000	transcriptional regulator
PCFPDMBM_01188	0.0	malT	-	-	K	ko:K03556	-	ko00000,ko03000	Positively regulates the transcription of the maltose regulon whose gene products are responsible for uptake and catabolism of malto-oligosaccharides. Binds and recognizes a DNA motif (called the malT box) 5'-GGA TG GA-3'
PCFPDMBM_01189	0.0	malP	2.4.1.1	GT35	G	ko:K00688	ko00500,ko01100,ko01110,ko02026,ko04217,ko04910,ko04922,ko04931,map00500,map01100,map01110,map02026,map04217,map04910,map04922,map04931	ko00000,ko00001,ko01000	Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
PCFPDMBM_01190	0.0	malQ	2.4.1.25	GH77	G	ko:K00705	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	4-alpha-glucanotransferase
PCFPDMBM_01191	6.19e-285	gntT	-	-	EG	ko:K06155	-	ko00000,ko02000	Gluconate
PCFPDMBM_01192	2.99e-134	nfuA	-	-	C	ko:K07400	-	ko00000	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
PCFPDMBM_01193	1e-131	gntX	-	-	S	-	-	-	Competence protein
PCFPDMBM_01194	3.71e-163	bioH	3.1.1.85	-	S	ko:K02170	ko00780,ko01100,map00780,map01100	ko00000,ko00001,ko00002,ko01000	The physiological role of BioH is to remove the methyl group introduced by BioC when the pimeloyl moiety is complete. It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway through the hydrolysis of the ester bonds of pimeloyl-ACP esters
PCFPDMBM_01195	1.5e-49	yahO	-	-	S	-	-	-	Protein of unknown function (DUF1471)
PCFPDMBM_01196	7.43e-45	feoC	-	-	K	ko:K07490	-	ko00000,ko02000	May function as a transcriptional regulator that controls feoABC expression
PCFPDMBM_01197	0.0	feoB	-	-	P	ko:K04759	-	ko00000,ko02000	Transporter of a GTP-driven Fe(2 ) uptake system
PCFPDMBM_01198	2.02e-43	feoA	-	-	P	ko:K04758	-	ko00000,ko02000	FeoA domain
PCFPDMBM_01199	0.0	yhgF	-	-	K	ko:K06959	-	ko00000	accessory protein
PCFPDMBM_01200	3.15e-108	greB	-	-	K	ko:K04760	-	ko00000,ko03021	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length
PCFPDMBM_01201	6.11e-169	ompR	-	-	K	ko:K07659	ko02020,ko02026,map02020,map02026	ko00000,ko00001,ko00002,ko02022	Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PCFPDMBM_01202	1.21e-315	envZ	2.7.13.3	-	T	ko:K07638	ko02020,ko02026,map02020,map02026	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
PCFPDMBM_01203	0.0	pckA	4.1.1.49	-	H	ko:K01610	ko00010,ko00020,ko00620,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00710,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
PCFPDMBM_01204	3.6e-208	hslO	-	-	O	ko:K04083	-	ko00000,ko03110	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
PCFPDMBM_01205	2.76e-86	hslR	-	-	J	ko:K04762	-	ko00000,ko03110	Belongs to the HSP15 family
PCFPDMBM_01206	1.76e-161	yrfG	3.1.3.5	-	S	ko:K20881	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant 3
PCFPDMBM_01207	0.0	yrfF	-	-	S	-	-	-	Intracellular growth attenuator
PCFPDMBM_01208	1.05e-127	nudE	-	-	L	ko:K08312	ko00230,map00230	ko00000,ko00001,ko01000	Hydrolase
PCFPDMBM_01209	0.0	mrcA	2.4.1.129, 3.4.16.4	GT51	M	ko:K05366	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01003,ko01011	penicillin-binding protein 1A
PCFPDMBM_01210	5.68e-162	hofM	-	-	NU	ko:K12288	-	ko00000,ko02044	Pilus assembly protein
PCFPDMBM_01211	2.86e-76	hofN	-	-	NU	ko:K12289	-	ko00000,ko02044	carbon utilization
PCFPDMBM_01212	3.15e-65	hofO	-	-	S	ko:K12290	-	ko00000,ko02044	carbon utilization
PCFPDMBM_01213	6.61e-241	pilQ	-	-	U	ko:K02507,ko:K02666	-	ko00000,ko02035,ko02044	(Type IV) pilus
PCFPDMBM_01214	8.14e-116	aroK	2.7.1.71	-	F	ko:K00891	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
PCFPDMBM_01215	2.68e-252	aroB	4.2.3.4	-	E	ko:K01735	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
PCFPDMBM_01216	7.15e-191	damX	-	-	D	ko:K03112	-	ko00000	Cell division protein DamX
PCFPDMBM_01217	6.56e-184	dam	2.1.1.72	-	H	ko:K06223	ko03430,map03430	ko00000,ko00001,ko01000,ko02048,ko03032,ko03400	Site-specific DNA-methyltransferase (adenine-specific)
PCFPDMBM_01218	2.81e-158	rpe	5.1.3.1	-	G	ko:K01783	ko00030,ko00040,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the ribulose-phosphate 3-epimerase family
PCFPDMBM_01219	2.28e-171	gph	3.1.3.18	-	G	ko:K01091	ko00630,ko01100,ko01110,ko01130,map00630,map01100,map01110,map01130	ko00000,ko00001,ko01000	Phosphoglycolate phosphatase
PCFPDMBM_01220	1.25e-236	trpS	6.1.1.2	-	J	ko:K01867	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Tryptophanyl-tRNA synthetase
PCFPDMBM_01221	1.57e-34	yhfL	-	-	S	-	-	-	Protein of unknown function (DUF4223)
PCFPDMBM_01222	0.0	cysG	1.3.1.76, 2.1.1.107, 4.99.1.4	-	H	ko:K02302,ko:K02304	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	ko00000,ko00001,ko00002,ko01000	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
PCFPDMBM_01223	9.78e-190	nirC	-	-	P	ko:K02598	-	ko00000,ko02000	nitrite transporter
PCFPDMBM_01224	1.98e-74	nirD	1.7.1.15	-	P	ko:K00363	ko00910,ko01120,map00910,map01120	ko00000,ko00001,ko00002,ko01000	Nitrite reductase
PCFPDMBM_01225	0.0	nirB	1.7.1.15	-	C	ko:K00362	ko00910,ko01120,map00910,map01120	ko00000,ko00001,ko00002,ko01000	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
PCFPDMBM_01226	7.59e-316	codA	3.5.4.1	-	F	ko:K01485	ko00240,ko00330,ko01100,map00240,map00330,map01100	ko00000,ko00001,ko01000	cytosine deaminase
PCFPDMBM_01227	3.91e-268	tsgA	-	-	G	ko:K06141	-	ko00000,ko02000	Protein tsgA homolog
PCFPDMBM_01228	2.01e-127	ppiA	5.2.1.8	-	M	ko:K01802,ko:K03767,ko:K03768	ko01503,ko04217,map01503,map04217	ko00000,ko00001,ko01000,ko03110,ko04147	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
PCFPDMBM_01229	1.36e-139	fic	-	-	D	ko:K04095	-	ko00000,ko03036	cell filamentation protein Fic
PCFPDMBM_01230	7.08e-131	pabA	2.6.1.85, 4.1.3.27	-	EH	ko:K01658,ko:K01664	ko00400,ko00405,ko00790,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00400,map00405,map00790,map01100,map01110,map01130,map01230,map02024,map02025	ko00000,ko00001,ko00002,ko01000	anthranilate synthase
PCFPDMBM_01231	1.01e-292	argD	2.6.1.11, 2.6.1.17, 2.6.1.81	-	E	ko:K00821,ko:K00840	ko00220,ko00300,ko00330,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00220,map00300,map00330,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	aminotransferase
PCFPDMBM_01232	0.0	yhfK	-	-	S	-	-	-	integral membrane protein, YccS YhfK family
PCFPDMBM_01233	1.03e-148	crp	-	-	K	ko:K10914	ko02020,ko02024,ko02025,ko02026,ko05111,map02020,map02024,map02025,map02026,map05111	ko00000,ko00001,ko03000	COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
PCFPDMBM_01234	4.39e-88	yhfA	-	-	O	ko:K07397	-	ko00000	Redox protein regulator of disulfide bond formation
PCFPDMBM_01235	8.51e-210	prkB	2.7.1.19	-	G	ko:K00855	ko00710,ko01100,ko01120,ko01200,map00710,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Phosphoribulokinase
PCFPDMBM_01236	1.98e-44	yheU	-	-	S	ko:K09898	-	ko00000	Belongs to the UPF0270 family
PCFPDMBM_01237	7.93e-227	yheT	-	-	S	ko:K07019	-	ko00000	PFAM Alpha beta hydrolase
PCFPDMBM_01238	0.0	mdcA	2.3.1.187	-	I	ko:K13929	-	ko00000,ko01000,ko02000	Malonate decarboxylase
PCFPDMBM_01239	6.5e-187	mdcB	2.4.2.52	-	H	ko:K05966,ko:K13930	ko02020,map02020	ko00000,ko00001,ko01000	Involved in the formation of 2-(5''-phosphoribosyl)-3'- dephosphocoenzyme-A, the prosthetic group of the acyl-carrier protein of the malonate decarboxylase
PCFPDMBM_01240	1.85e-59	mdcC	-	-	C	ko:K13931	-	ko00000,ko02000	Subunit of malonate decarboxylase, it is an acyl carrier protein to which acetyl and malonyl thioester residues are bound via a 2'-(5''-phosphoribosyl)-3'-dephospho-CoA prosthetic group and turn over during the catalytic mechanism
PCFPDMBM_01241	4.65e-192	mdcD	4.1.1.87	-	I	ko:K13932	-	ko00000,ko01000	Beta subunit
PCFPDMBM_01242	6.28e-178	mdcE	4.1.1.87	-	I	ko:K13933	-	ko00000,ko01000	Malonate decarboxylase gamma subunit
PCFPDMBM_01243	4.81e-206	mdcF	-	-	S	ko:K07088,ko:K13936	-	ko00000,ko02000	auxin efflux carrier
PCFPDMBM_01244	8.71e-116	mdcG	2.7.7.66	-	H	ko:K13934	-	ko00000,ko01000	Phosphoribosyl-dephospho-CoA transferase MdcG
PCFPDMBM_01245	4.51e-187	mdcH	2.3.1.39	-	I	ko:K13935	-	ko00000,ko01000	malonyl CoA-acyl carrier protein transacylase
PCFPDMBM_01246	3.19e-212	mdcR	-	-	K	ko:K13928	-	ko00000,ko03000	transcriptional regulator
PCFPDMBM_01247	0.0	yheS	-	-	S	ko:K06158	-	ko00000,ko03012	ABC transporter
PCFPDMBM_01248	8.66e-130	kefG	-	-	S	ko:K11748	-	ko00000,ko02000	Regulatory subunit of a potassium efflux system that confers protection against electrophiles. Required for full activity of KefB
PCFPDMBM_01249	0.0	kefB	-	-	P	ko:K03455,ko:K11745,ko:K11747	-	ko00000,ko02000	Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
PCFPDMBM_01250	4.37e-43	yheV	-	-	S	ko:K07070	-	ko00000	Probable metal-binding protein (DUF2387)
PCFPDMBM_01251	1.33e-116	slyD	5.2.1.8	-	G	ko:K03775	-	ko00000,ko01000,ko03110	Peptidyl-prolyl cis-trans
PCFPDMBM_01252	1.78e-38	slyX	-	-	S	ko:K03745	-	ko00000	Belongs to the SlyX family
PCFPDMBM_01253	3.98e-170	fkpA	5.2.1.8	-	M	ko:K03772	-	ko00000,ko01000,ko03110	Peptidyl-prolyl cis-trans
PCFPDMBM_01254	3.82e-168	yheO	-	-	S	-	-	-	protein conserved in bacteria
PCFPDMBM_01255	3.03e-83	tusD	-	-	P	ko:K07235	ko04122,map04122	ko00000,ko00001,ko01000,ko03016	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
PCFPDMBM_01256	1.22e-62	tusC	-	-	J	ko:K07236	ko04122,map04122	ko00000,ko00001,ko03016	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions
PCFPDMBM_01257	3.27e-49	tusB	-	-	J	ko:K07237	ko04122,map04122	ko00000,ko00001,ko03016	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions
PCFPDMBM_01258	9.54e-85	rpsL	-	-	J	ko:K02950	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
PCFPDMBM_01259	1.9e-104	rpsG	-	-	J	ko:K02992	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center
PCFPDMBM_01260	0.0	fusA	-	-	J	ko:K02355	-	ko00000,ko03012,ko03029	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
PCFPDMBM_01261	2.2e-118	-	-	-	L	ko:K07497	-	ko00000	HTH-like domain
PCFPDMBM_01262	0.0	-	-	-	V	ko:K06147,ko:K13409	ko02010,ko04626,map02010,map04626	ko00000,ko00001,ko00002,ko02000,ko02044	COG2274 ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
PCFPDMBM_01263	2.07e-213	-	-	-	M	ko:K13408	ko04626,map04626	ko00000,ko00001,ko00002,ko02000,ko02044	Secretion Protein
PCFPDMBM_01264	6.72e-216	epmB	5.4.3.2	-	C	ko:K01843,ko:K19810	ko00310,map00310	ko00000,ko00001,ko01000,ko03012	lysine 2,3-aminomutase
PCFPDMBM_01265	7.96e-133	efp	-	-	J	ko:K02356	-	ko00000,ko03012	Involved in peptide bond synthesis. Alleviates ribosome stalling that occurs when 3 or more consecutive Pro residues or the sequence PPG is present in a protein, possibly by augmenting the peptidyl transferase activity of the ribosome. Modification of
PCFPDMBM_01266	4.68e-13	-	-	-	S	ko:K16347	-	ko00000,ko02000	Entericidin EcnA/B family
PCFPDMBM_01267	1.72e-19	ecnB	-	-	S	ko:K16348	-	ko00000,ko02000	Entericidin
PCFPDMBM_01268	9.45e-124	ecnR	-	-	K	-	-	-	regulatory protein
PCFPDMBM_01269	2.01e-59	sugE	-	-	U	ko:K03297,ko:K11741	-	ko00000,ko02000	multidrug resistance protein
PCFPDMBM_01270	5.61e-109	blc	-	-	M	ko:K03098	-	ko00000,ko04147	Outer Membrane Lipoprotein
PCFPDMBM_01271	2.48e-80	frdD	-	-	C	ko:K00247	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	ko00000,ko00001,ko00002	Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane
PCFPDMBM_01272	6.06e-89	frdC	-	-	C	ko:K00246	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	ko00000,ko00001,ko00002	Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane
PCFPDMBM_01273	1.4e-181	frdB	1.3.5.4	-	C	ko:K00245	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	ko00000,ko00001,ko00002,ko01000	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
PCFPDMBM_01274	0.0	frdA	1.3.5.4	-	C	ko:K00244	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	ko00000,ko00001,ko00002,ko01000	Belongs to the FAD-dependent oxidoreductase 2 family. FRD SDH subfamily
PCFPDMBM_01275	7.21e-236	epmA	-	-	J	ko:K04568	-	ko00000,ko01000,ko03012	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
PCFPDMBM_01276	0.0	yjeP	-	-	M	ko:K05802,ko:K22051	-	ko00000,ko02000	mechanosensitive ion channel
PCFPDMBM_01277	1.18e-228	psd	4.1.1.65	-	I	ko:K01613	ko00564,ko01100,ko01110,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer)
PCFPDMBM_01278	4.23e-247	rsgA	3.1.3.100	-	S	ko:K06949	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000,ko03009	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
PCFPDMBM_01279	1.5e-129	orn	-	-	L	ko:K13288	ko03008,map03008	ko00000,ko00001,ko01000,ko03009,ko03019	3'-to-5' exoribonuclease specific for small oligoribonucleotides
PCFPDMBM_01283	3.39e-275	queG	1.17.99.6	-	C	ko:K18979	-	ko00000,ko01000,ko03016	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
PCFPDMBM_01284	7.75e-286	nnrD	4.2.1.136, 5.1.99.6	-	H	ko:K17758,ko:K17759	-	ko00000,ko01000	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
PCFPDMBM_01285	1.48e-101	yjeE	-	-	S	ko:K06925	-	ko00000,ko03016	ATPase or kinase
PCFPDMBM_01286	1.5e-295	amiB	3.5.1.28	-	M	ko:K01448	ko01503,map01503	ko00000,ko00001,ko00002,ko01000,ko01011,ko03036	N-acetylmuramoyl-L-alanine amidase
PCFPDMBM_01287	0.0	mutL	-	-	L	ko:K03572	ko03430,map03430	ko00000,ko00001,ko03400	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
PCFPDMBM_01288	2.15e-212	miaA	2.5.1.75	-	F	ko:K00791	ko00908,ko01100,ko01110,map00908,map01100,map01110	ko00000,ko00001,ko01000,ko01006,ko03016	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
PCFPDMBM_01289	1.97e-60	hfq	-	-	J	ko:K03666	ko02024,ko03018,ko05111,map02024,map03018,map05111	ko00000,ko00001,ko03019,ko03036	RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs
PCFPDMBM_01290	4.03e-300	hflX	-	-	S	ko:K03665	-	ko00000,ko03009	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
PCFPDMBM_01291	2.19e-240	hflK	-	-	O	ko:K04088	-	ko00000,ko00002,ko01000	HflC and HflK could encode or regulate a protease
PCFPDMBM_01292	3.69e-215	hflC	-	-	O	ko:K04087	-	ko00000,ko00002,ko01000	HflC and HflK could regulate a protease
PCFPDMBM_01293	0.0	purA	6.3.4.4	-	F	ko:K01939	ko00230,ko00250,ko01100,map00230,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
PCFPDMBM_01294	3.98e-92	nsrR	-	-	K	ko:K13771	ko05132,map05132	ko00000,ko00001,ko03000	Nitric oxide-sensitive repressor of genes involved in protecting the cell against nitrosative stress. May require iron for activity
PCFPDMBM_01295	0.0	rnr	-	-	J	ko:K12573	ko03018,map03018	ko00000,ko00001,ko01000,ko03016,ko03019	3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
PCFPDMBM_01296	8.62e-169	rlmB	2.1.1.185	-	J	ko:K03218	-	ko00000,ko01000,ko03009	Specifically methylates the ribose of guanosine 2251 in 23S rRNA
PCFPDMBM_01297	4.87e-282	-	-	-	EGP	-	-	-	Major facilitator superfamily
PCFPDMBM_01298	0.0	aidB	-	-	I	ko:K09456	-	ko00000	acyl-CoA dehydrogenase
PCFPDMBM_01299	2.2e-104	-	-	-	NT	-	-	-	Single cache domain 3
PCFPDMBM_01300	3.55e-285	-	-	-	NT	-	-	-	chemotaxis, protein
PCFPDMBM_01301	1.74e-52	yjfN	-	-	S	-	-	-	Protein of unknown function (DUF1471)
PCFPDMBM_01302	4.89e-26	bsmA	-	-	CO	ko:K09914	-	ko00000	response to hydrogen peroxide
PCFPDMBM_01303	3.63e-163	yjfP	-	-	S	ko:K06889	-	ko00000	esterase activity towards palmitoyl-CoA and pNP-butyrate in vitro
PCFPDMBM_01304	1.38e-171	ulaR	-	-	K	ko:K03477	-	ko00000,ko03000	transcriptional regulator
PCFPDMBM_01305	9.62e-276	ulaG	-	-	S	ko:K03476	ko00053,ko01100,ko01120,map00053,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Probably catalyzes the hydrolysis of L-ascorbate-6-P into 3-keto-L-gulonate-6-P. Is essential for L-ascorbate utilization under anaerobic conditions
PCFPDMBM_01306	0.0	ulaA	2.7.1.194	-	S	ko:K02822,ko:K03475	ko00053,ko01100,ko01120,ko02060,map00053,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system sugar-specific permease component
PCFPDMBM_01307	1.19e-65	ulaB	2.7.1.194	-	G	ko:K02822	ko00053,ko01100,ko01120,ko02060,map00053,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. The enzyme II UlaABC PTS system is involved in ascorbate transport
PCFPDMBM_01308	7.17e-104	ulaC	2.7.1.194	-	G	ko:K02821	ko00053,ko01100,ko01120,ko02060,map00053,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PCFPDMBM_01309	3.82e-148	ulaD	4.1.1.85	-	G	ko:K03078	ko00040,ko00053,ko01100,ko01120,map00040,map00053,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Orotidine 5'-phosphate decarboxylase / HUMPS family
PCFPDMBM_01310	6.93e-199	ulaE	5.1.3.22	-	G	ko:K03079	ko00040,ko00053,ko01100,ko01120,map00040,map00053,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Xylose isomerase-like TIM barrel
PCFPDMBM_01311	3.15e-161	ulaF	5.1.3.4	-	G	ko:K03077	ko00040,ko00053,ko01100,ko01120,map00040,map00053,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate
PCFPDMBM_01312	4.58e-54	yjfY	-	-	S	-	-	-	Protein of unknown function (DUF1471)
PCFPDMBM_01313	2.89e-87	rpsF	-	-	J	ko:K02990	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Binds together with S18 to 16S ribosomal RNA
PCFPDMBM_01314	3.92e-70	priB	-	-	L	ko:K02686	ko03440,map03440	ko00000,ko00001,ko03400	Binds single-stranded DNA at the primosome assembly site (PAS)
PCFPDMBM_01315	3.61e-46	rpsR	-	-	J	ko:K02963	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
PCFPDMBM_01316	1.78e-92	rplI	-	-	J	ko:K02939	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	binds to the 23S rRNA
PCFPDMBM_01317	1.2e-212	-	-	-	EG	-	-	-	transporter
PCFPDMBM_01318	1.62e-137	ytfB	-	-	M	ko:K07268,ko:K07269	-	ko00000	Opacity-associated protein A
PCFPDMBM_01319	3.71e-140	fklB	5.2.1.8	-	O	ko:K03773	-	ko00000,ko01000,ko03110	Peptidyl-prolyl cis-trans
PCFPDMBM_01320	0.0	cycA	-	-	E	ko:K11737	-	ko00000,ko02000	amino acid
PCFPDMBM_01321	2.05e-153	ytfE	-	-	D	ko:K07322	-	ko00000	Di-iron-containing protein involved in the repair of iron-sulfur clusters
PCFPDMBM_01322	1.93e-258	tsr	-	-	NT	ko:K03406,ko:K05874,ko:K05875,ko:K05876,ko:K05877	ko02020,ko02030,map02020,map02030	ko00000,ko00001,ko02035	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
PCFPDMBM_01323	4.01e-216	ytfF	-	-	EG	-	-	-	Permeases of the drug metabolite transporter (DMT) superfamily
PCFPDMBM_01324	7.53e-201	-	-	-	K	-	-	-	transcriptional regulator
PCFPDMBM_01325	2.51e-178	qorB	1.6.5.2	-	GM	ko:K19267	ko00130,ko01110,map00130,map01110	ko00000,ko00001,ko01000	NmrA family
PCFPDMBM_01326	4.34e-82	ytfH	-	-	K	-	-	-	transcriptional regulator
PCFPDMBM_01327	0.0	cpdB	3.1.3.6, 3.1.4.16	-	F	ko:K01119	ko00230,ko00240,map00230,map00240	ko00000,ko00001,ko01000	Belongs to the 5'-nucleotidase family
PCFPDMBM_01328	3.97e-173	cysQ	3.1.3.7	-	P	ko:K01082	ko00920,ko01100,ko01120,ko01130,map00920,map01100,map01120,map01130	ko00000,ko00001,ko01000,ko03016	3'(2'),5'-bisphosphate nucleotidase
PCFPDMBM_01329	1.59e-117	ytfJ	-	-	S	ko:K07109	-	ko00000	transcriptional regulator
PCFPDMBM_01330	1.19e-41	ytfK	-	-	S	-	-	-	Protein of unknown function (DUF1107)
PCFPDMBM_01331	1.22e-290	ytfL	-	-	P	-	-	-	Hemolysins and related proteins containing CBS domains
PCFPDMBM_01332	3.3e-151	msrA	1.8.4.11	-	C	ko:K07304	-	ko00000,ko01000	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PCFPDMBM_01333	0.0	ytfM	-	-	M	ko:K07278	-	ko00000,ko02000	COG0729 Outer membrane protein
PCFPDMBM_01334	0.0	ytfN	-	-	M	ko:K09800	-	ko00000,ko02000	protein conserved in bacteria
PCFPDMBM_01335	6.72e-78	ytfP	-	-	S	-	-	-	AIG2 family
PCFPDMBM_01336	7.5e-127	ppa	3.6.1.1	-	C	ko:K01507	ko00190,map00190	ko00000,ko00001,ko01000	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
PCFPDMBM_01337	2.51e-212	ytfQ	-	-	G	ko:K02058	-	ko00000,ko00002,ko02000	Periplasmic binding protein domain
PCFPDMBM_01338	0.0	ytfR	3.6.3.17	-	P	ko:K02056,ko:K10441,ko:K10542,ko:K10545,ko:K10562,ko:K17204	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	import. Responsible for energy coupling to the transport system
PCFPDMBM_01339	1.64e-219	ytfT	-	-	G	ko:K02057,ko:K10440	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
PCFPDMBM_01340	5.7e-219	yjfF	-	-	P	ko:K02057,ko:K10440,ko:K17209	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
PCFPDMBM_01341	4.75e-297	-	-	-	NT	ko:K03406,ko:K05874,ko:K05875,ko:K05876,ko:K05877	ko02020,ko02030,map02020,map02030	ko00000,ko00001,ko02035	chemotaxis, protein
PCFPDMBM_01342	1.77e-42	-	-	-	K	-	-	-	Bacterial regulatory helix-turn-helix protein, lysR family
PCFPDMBM_01343	1.16e-240	fbp	3.1.3.11	-	G	ko:K03841	ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko04152,ko04910,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map04152,map04910	ko00000,ko00001,ko00002,ko01000,ko04147	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
PCFPDMBM_01344	0.0	mpl	6.3.2.45	-	M	ko:K02558	-	ko00000,ko01000	Reutilizes the intact tripeptide L-alanyl-gamma-D- glutamyl-meso-diaminopimelate by linking it to UDP-N- acetylmuramate
PCFPDMBM_01345	2.76e-117	yjgA	-	-	S	ko:K09889	-	ko00000,ko03009	Belongs to the UPF0307 family
PCFPDMBM_01346	1.07e-313	pmbA	-	-	S	ko:K03592	-	ko00000,ko01002	Protease involved in proteolytic processing of the antibiotic Microcin B17 and in sensitivity to the DNA gyrase inhibitor LetD
PCFPDMBM_01347	1.14e-73	cybC	-	-	C	ko:K15536	-	ko00000	Cytochrome b(562)
PCFPDMBM_01349	1.22e-70	-	-	-	S	-	-	-	PRD domain protein
PCFPDMBM_01350	5.4e-80	-	-	-	S	-	-	-	Glycine-rich SFCGS
PCFPDMBM_01351	2.19e-62	-	-	-	S	-	-	-	Domain of unknown function (DUF4312)
PCFPDMBM_01352	1.68e-180	-	-	-	S	-	-	-	Domain of unknown function (DUF4311)
PCFPDMBM_01353	6.6e-142	-	-	-	S	-	-	-	Membrane
PCFPDMBM_01354	1.58e-263	dho	3.5.2.3	-	S	ko:K01465	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides
PCFPDMBM_01355	7.09e-253	selA	2.9.1.1	-	E	ko:K01042	ko00450,ko00970,map00450,map00970	ko00000,ko00001,ko01000	PFAM aromatic amino acid beta-eliminating lyase threonine aldolase
PCFPDMBM_01356	2.11e-168	-	-	-	S	-	-	-	2-dehydro-3-deoxyphosphooctonate aldolase
PCFPDMBM_01357	1.25e-233	ykgB	-	-	G	-	-	-	COG2706 3-carboxymuconate cyclase
PCFPDMBM_01358	0.0	licR	-	-	GK	-	-	-	transcriptional antiterminator
PCFPDMBM_01359	2.49e-46	relB	-	-	L	ko:K18918	-	ko00000,ko02048,ko03000	RelB antitoxin
PCFPDMBM_01360	1.06e-49	relE	-	-	DJ	ko:K06218	-	ko00000,ko02048	ParE toxin of type II toxin-antitoxin system, parDE
PCFPDMBM_01361	1.11e-111	nrdG	1.97.1.4	-	O	ko:K04068	-	ko00000,ko01000	Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PCFPDMBM_01362	0.0	nrdD	1.1.98.6	-	F	ko:K21636	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Ribonucleoside-triphosphate reductase
PCFPDMBM_01363	0.0	treC	3.2.1.10, 3.2.1.20, 3.2.1.93	GH13,GH31	G	ko:K01182,ko:K01187,ko:K01226	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	COG0366 Glycosidases
PCFPDMBM_01364	0.0	treB	2.7.1.201	-	G	ko:K02818,ko:K02819	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	pts system
PCFPDMBM_01365	5.47e-210	treR	-	-	K	ko:K03485	-	ko00000,ko03000	trehalose
PCFPDMBM_01366	0.0	mgtA	3.6.3.2	-	P	ko:K01531,ko:K12955	-	ko00000,ko01000	ATPase, P-type (transporting), HAD superfamily, subfamily IC
PCFPDMBM_01367	0.0	nahA	3.2.1.52	GH20	G	ko:K12373	ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142	ko00000,ko00001,ko00002,ko01000,ko03110	PFAM Glycoside hydrolase, family 20
PCFPDMBM_01368	0.0	-	-	AA10,CBM73	E	ko:K21712	ko05110,map05110	ko00000,ko00001	Probably interacts with GlcNAc residues. May promote attachment to both epithelial cell surfaces and chitin
PCFPDMBM_01369	1.24e-82	yjgF	3.5.99.10	-	J	ko:K09022	-	ko00000,ko01000	PFAM Endoribonuclease L-PSP
PCFPDMBM_01370	2.24e-106	pyrI	-	-	F	ko:K00610	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002	Involved in allosteric regulation of aspartate carbamoyltransferase
PCFPDMBM_01371	4.93e-215	pyrB	2.1.3.2	-	F	ko:K00609	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the ATCase OTCase family
PCFPDMBM_01372	3.46e-99	tabA	-	-	G	ko:K19334	-	ko00000,ko02048	Toxin-antitoxin biofilm protein TabA
PCFPDMBM_01373	1.8e-197	yagE	4.1.2.28, 4.3.3.7	-	EM	ko:K01714,ko:K22397	ko00040,ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00040,map00261,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the DapA family
PCFPDMBM_01374	0.0	yagF	4.2.1.82	-	EG	ko:K22396	ko00040,map00040	ko00000,ko00001,ko01000	Belongs to the IlvD Edd family
PCFPDMBM_01375	0.0	yagG	-	-	G	ko:K03292	-	ko00000	COG2211 Na melibiose symporter and related transporters
PCFPDMBM_01376	0.0	yagH	3.2.1.37	GH43	G	ko:K01198	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 43 family
PCFPDMBM_01377	2.02e-169	yagI	-	-	K	-	-	-	transcriptional regulator
PCFPDMBM_01378	2.21e-29	iraM	-	-	S	ko:K21638	-	ko00000	Inhibits RpoS proteolysis by regulating RssB activity, thereby increasing the stability of the sigma stress factor RpoS during magnesium starvation
PCFPDMBM_01379	1.52e-237	argI	2.1.3.3, 2.1.3.9	-	E	ko:K00611,ko:K09065	ko00220,ko01100,ko01110,ko01130,ko01230,map00220,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
PCFPDMBM_01380	2.14e-91	rraB	-	-	S	ko:K09893	-	ko00000,ko03019	Globally modulates RNA abundance by binding to RNase E (Rne) and regulating its endonucleolytic activity. Can modulate Rne action in a substrate-dependent manner by altering the composition of the degradosome
PCFPDMBM_01381	8.34e-178	miaE	-	-	FJ	ko:K06169	-	ko00000,ko01000,ko03016	tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE)
PCFPDMBM_01382	2.54e-131	-	-	-	-	-	-	-	-
PCFPDMBM_01384	3.69e-230	metAS	2.3.1.46	-	E	ko:K00651	ko00270,ko00920,ko01100,ko01110,ko01230,map00270,map00920,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Transfers a succinyl group from succinyl-CoA to L- homoserine, forming succinyl-L-homoserine
PCFPDMBM_01385	0.0	aceB	2.3.3.9	-	C	ko:K01638	ko00620,ko00630,ko01100,ko01110,ko01120,ko01200,map00620,map00630,map01100,map01110,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
PCFPDMBM_01386	2.2e-308	aceA	4.1.3.1	-	C	ko:K01637	ko00630,ko01100,ko01110,ko01120,ko01200,map00630,map01100,map01110,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Isocitrate lyase
PCFPDMBM_01387	0.0	aceK	2.7.11.5	-	F	ko:K00906	-	ko00000,ko01000	Bifunctional enzyme which can phosphorylate or dephosphorylate isocitrate dehydrogenase (IDH) on a specific serine residue. This is a regulatory mechanism which enables bacteria to bypass the Krebs cycle via the glyoxylate shunt in response to the source of carbon. When bacteria are grown on glucose, IDH is fully active and unphosphorylated, but when grown on acetate or ethanol, the activity of IDH declines drastically concomitant with its phosphorylation
PCFPDMBM_01388	5.02e-190	iclR	-	-	K	ko:K13641	-	ko00000,ko03000	transcriptional regulator
PCFPDMBM_01389	0.0	metH	2.1.1.13	-	E	ko:K00548	ko00270,ko00450,ko00670,ko01100,ko01110,ko01230,map00270,map00450,map00670,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	methionine synthase
PCFPDMBM_01390	0.0	yjbB	-	-	P	ko:K03324	-	ko00000,ko02000	Na Pi-Cotransporter
PCFPDMBM_01391	2.35e-55	-	-	-	K	-	-	-	Phage derived protein Gp49-like (DUF891)
PCFPDMBM_01392	5.22e-47	-	-	-	K	-	-	-	conserved small protein
PCFPDMBM_01393	7.21e-203	rluF	5.4.99.19, 5.4.99.21	-	J	ko:K06182,ko:K06183	-	ko00000,ko01000,ko03009	Belongs to the pseudouridine synthase RsuA family
PCFPDMBM_01394	7.09e-53	yjbD	-	-	S	-	-	-	YjbD family (DUF3811)
PCFPDMBM_01395	1.81e-203	yocS	-	-	S	ko:K03453	-	ko00000	Bile acid sodium symporter
PCFPDMBM_01396	2.47e-291	rtcR	-	-	K	ko:K14414	-	ko00000,ko03000	regulates genes involved in forming a 2',3'-cyclic phosphodiester on RNA
PCFPDMBM_01397	1.36e-33	rtcR	-	-	K	ko:K14414	-	ko00000,ko03000	regulates genes involved in forming a 2',3'-cyclic phosphodiester on RNA
PCFPDMBM_01398	5.22e-296	rtcB	6.5.1.3	-	S	ko:K14415	-	ko00000,ko01000,ko03016	Belongs to the RtcB family
PCFPDMBM_01399	6.93e-299	lysC	2.7.2.4	-	E	ko:K00928	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the aspartokinase family
PCFPDMBM_01400	0.0	pgi	5.3.1.9	-	G	ko:K01810	ko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the GPI family
PCFPDMBM_01401	6.69e-84	psiE	-	-	S	ko:K13256	-	ko00000	Protein PsiE homolog
PCFPDMBM_01402	2.23e-204	malG	-	-	P	ko:K10110	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	transport
PCFPDMBM_01403	0.0	malF	-	-	P	ko:K10109	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	transport
PCFPDMBM_01404	4.94e-288	malE	-	-	G	ko:K10108	ko02010,ko02030,map02010,map02030	ko00000,ko00001,ko00002,ko02000	Functions in the MalKFGE ABC transporter complex to transport maltose into the cell by using ATP hydrolysis
PCFPDMBM_01405	4.02e-262	malK	-	-	P	ko:K10111	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Belongs to the ABC transporter superfamily
PCFPDMBM_01406	0.0	lamB	-	-	M	ko:K02024	-	ko00000,ko02000	involved in the transport of maltose and maltodextrins
PCFPDMBM_01407	2.11e-191	malM	-	-	S	ko:K05775	-	ko00000	maltose operon periplasmic
PCFPDMBM_01408	7.3e-111	ubiC	4.1.3.40	-	H	ko:K03181	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Removes the pyruvyl group from chorismate, with concomitant aromatization of the ring, to provide 4- hydroxybenzoate (4HB) for the ubiquinone pathway
PCFPDMBM_01409	1.9e-197	ubiA	2.5.1.39	-	H	ko:K03179	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01006	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
PCFPDMBM_01410	0.0	plsB	2.3.1.15	-	I	ko:K00631	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Belongs to the GPAT DAPAT family
PCFPDMBM_01411	3.49e-77	dgkA	2.7.1.107	-	M	ko:K00901	ko00561,ko00564,ko01100,ko01110,ko04070,ko04072,ko05231,map00561,map00564,map01100,map01110,map04070,map04072,map05231	ko00000,ko00001,ko01000	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
PCFPDMBM_01412	1.58e-139	lexA	3.4.21.88	-	K	ko:K01356	-	ko00000,ko00002,ko01000,ko01002,ko03400	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
PCFPDMBM_01413	1.53e-279	dinF	-	-	V	ko:K03327	-	ko00000,ko02000	COG0534 Na -driven multidrug efflux pump
PCFPDMBM_01414	8.59e-47	yjbJ	-	-	S	-	-	-	Belongs to the UPF0337 (CsbD) family
PCFPDMBM_01415	1.05e-114	zur	-	-	P	ko:K09823	ko02024,map02024	ko00000,ko00001,ko03000	belongs to the Fur family
PCFPDMBM_01416	6.06e-122	-	-	-	S	-	-	-	Cupin domain
PCFPDMBM_01417	6e-242	traF	-	-	S	-	-	-	transfer protein
PCFPDMBM_01418	1.52e-240	dusA	-	-	J	ko:K05539	-	ko00000,ko01000,ko03016	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs
PCFPDMBM_01419	4.6e-40	pspG	-	-	S	-	-	-	Phage Shock Protein G
PCFPDMBM_01420	3.53e-228	qor	1.6.5.5	-	C	ko:K00344	-	ko00000,ko01000	COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases
PCFPDMBM_01421	0.0	dnaB	3.6.4.12	-	L	ko:K02314	ko03030,ko04112,map03030,map04112	ko00000,ko00001,ko01000,ko03032	it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins
PCFPDMBM_01422	7.39e-253	alr	5.1.1.1	-	E	ko:K01775	ko00473,ko01100,ko01502,map00473,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
PCFPDMBM_01424	3.6e-286	tyrB	2.6.1.57	-	E	ko:K00832	ko00270,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01230,map00270,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	aminotransferase
PCFPDMBM_01425	1.02e-97	yjbQ	-	-	S	-	-	-	Secondary thiamine-phosphate synthase enzyme
PCFPDMBM_01426	3.02e-78	yjbR	-	-	S	-	-	-	protein conserved in bacteria
PCFPDMBM_01427	0.0	uvrA	-	-	L	ko:K03701	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
PCFPDMBM_01428	1.96e-108	ssb	-	-	L	ko:K03111	ko03030,ko03430,ko03440,map03030,map03430,map03440	ko00000,ko00001,ko03029,ko03032,ko03400	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
PCFPDMBM_01429	3.31e-57	yjcB	-	-	S	-	-	-	membrane
PCFPDMBM_01430	5.26e-277	-	-	-	T	-	-	-	Diguanylate cyclase
PCFPDMBM_01431	0.0	yjcC	-	-	T	-	-	-	signal transduction protein containing sensor and EAL
PCFPDMBM_01432	3.85e-72	soxS	-	-	K	ko:K07506,ko:K13631	-	ko00000,ko00002,ko03000	transcriptional regulator
PCFPDMBM_01433	1.92e-102	soxR	-	-	K	ko:K13639	-	ko00000,ko03000	redox-sensitive transcriptional activator SoxR
PCFPDMBM_01434	1.54e-145	gstA	2.5.1.18	-	O	ko:K00799	ko00480,ko00980,ko00982,ko00983,ko01524,ko05200,ko05204,ko05225,ko05418,map00480,map00980,map00982,map00983,map01524,map05200,map05204,map05225,map05418	ko00000,ko00001,ko01000,ko02000	Belongs to the GST superfamily
PCFPDMBM_01435	3.29e-292	yjcD	-	-	S	ko:K06901	-	ko00000,ko02000	permease
PCFPDMBM_01436	0.0	yjcE	-	-	P	ko:K03316	-	ko00000	NhaP-type Na H and K H antiporters
PCFPDMBM_01437	1.31e-211	ywbI	-	-	K	-	-	-	transcriptional regulator
PCFPDMBM_01438	9.89e-86	cidA	-	-	S	ko:K06518	-	ko00000,ko02000	LrgA family
PCFPDMBM_01439	3.37e-152	yohK_2	-	-	M	-	-	-	effector of murein hydrolase
PCFPDMBM_01440	1.28e-293	-	-	-	G	ko:K10192	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
PCFPDMBM_01441	3e-309	-	-	-	S	-	-	-	oxidoreductase
PCFPDMBM_01442	0.0	-	-	-	G	-	-	-	Belongs to the glycosyl hydrolase 67 family
PCFPDMBM_01443	0.0	actP	-	-	P	ko:K14393	-	ko00000,ko02000	Cation acetate symporter ActP
PCFPDMBM_01444	8.58e-65	yjcH	-	-	S	-	-	-	Protein of unknown function, DUF485
PCFPDMBM_01445	0.0	acsA	6.2.1.1	-	I	ko:K01895	ko00010,ko00620,ko00640,ko00680,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00620,map00640,map00680,map00720,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
PCFPDMBM_01446	6.54e-291	gltP	-	-	U	ko:K11102	-	ko00000,ko02000	Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
PCFPDMBM_01447	2.7e-112	yjcO	-	-	S	ko:K07126	-	ko00000	Sel1 repeat
PCFPDMBM_01448	0.0	fdhF	1.17.1.9, 1.17.99.7	-	C	ko:K00123,ko:K22015	ko00630,ko00680,ko01100,ko01120,ko01200,map00630,map00680,map01100,map01120,map01200	ko00000,ko00001,ko01000	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
PCFPDMBM_01449	2.94e-81	fdhF	1.17.1.9, 1.17.99.7	-	C	ko:K00123,ko:K22015	ko00630,ko00680,ko01100,ko01120,ko01200,map00630,map00680,map01100,map01120,map01200	ko00000,ko00001,ko01000	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
PCFPDMBM_01450	1.11e-155	-	-	-	K	ko:K02483	-	ko00000,ko02022	response regulator
PCFPDMBM_01451	7.36e-228	-	-	-	G	-	-	-	PfkB domain protein
PCFPDMBM_01452	9.73e-194	-	4.1.2.13	-	G	ko:K01624	ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Aldolase
PCFPDMBM_01453	3.42e-165	-	5.3.1.15	-	S	ko:K09988	ko00040,map00040	ko00000,ko00001,ko01000	D-lyxose isomerase
PCFPDMBM_01454	9.87e-212	-	-	-	G	ko:K10439	ko02010,ko02030,map02010,map02030	ko00000,ko00001,ko00002,ko02000	PFAM Periplasmic binding protein LacI transcriptional regulator
PCFPDMBM_01455	1.19e-212	-	-	-	U	ko:K10440	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
PCFPDMBM_01456	0.0	rbsA2	3.6.3.17	-	P	ko:K02056,ko:K10441,ko:K10542,ko:K10545,ko:K10562,ko:K17204	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	import. Responsible for energy coupling to the transport system
PCFPDMBM_01457	0.0	virA	-	-	T	-	-	-	Histidine kinase
PCFPDMBM_01458	1.59e-127	-	-	-	-	-	-	-	-
PCFPDMBM_01459	7.82e-18	-	-	-	-	-	-	-	-
PCFPDMBM_01460	1.34e-183	phnP	3.1.4.55	-	S	ko:K06167	ko00440,map00440	ko00000,ko00001,ko01000	Carbon-phosphorus lyase complex accessory protein
PCFPDMBM_01461	4.61e-97	phnO	-	-	K	ko:K09994	ko00440,map00440	ko00000,ko00001,ko01000	Escherichia coli uses a different mechanism of phosphonate catabolism where PhnO is not essential and seems to play a regulatory role
PCFPDMBM_01462	9.29e-116	phnN	2.7.4.23	-	F	ko:K05774	ko00030,map00030	ko00000,ko00001,ko01000	Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP)
PCFPDMBM_01463	2.6e-258	phnM	3.6.1.63	-	P	ko:K06162	ko00440,map00440	ko00000,ko00001,ko01000	phosphonate metabolism protein PhnM
PCFPDMBM_01464	5.87e-156	phnL	2.7.8.37	-	P	ko:K05780	ko00440,map00440	ko00000,ko00001,ko01000	phosphonate C-P lyase system protein PhnL
PCFPDMBM_01465	9.68e-172	phnK	-	-	P	ko:K05781	-	ko00000	Phosphonate C-P lyase
PCFPDMBM_01466	3.32e-203	phnJ	4.7.1.1	-	H	ko:K06163	ko00440,map00440	ko00000,ko00001,ko01000	Catalyzes the breakage of the C-P bond in alpha-D-ribose 1-methylphosphonate 5-phosphate (PRPn) forming alpha-D-ribose
PCFPDMBM_01467	8.36e-236	phnI	2.7.8.37	-	P	ko:K06164	ko00440,map00440	ko00000,ko00001,ko01000	Phosphonate
PCFPDMBM_01468	4.21e-131	phnH	2.7.8.37	-	P	ko:K06165	ko00440,map00440	ko00000,ko00001,ko01000	phosphonate C-P lyase system protein PhnH
PCFPDMBM_01469	4.02e-94	phnG	2.7.8.37	-	P	ko:K06166	ko00440,map00440	ko00000,ko00001,ko01000	Phosphonate C-P lyase system protein PhnG
PCFPDMBM_01470	8.32e-168	phnF	-	-	K	ko:K02043,ko:K03482	-	ko00000,ko03000	Transcriptional regulator
PCFPDMBM_01471	2.69e-182	phnE	-	-	P	ko:K02042	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Phosphonate ABC transporter
PCFPDMBM_01472	2.03e-228	phnD	-	-	P	ko:K02044	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Phosphonate ABC transporter
PCFPDMBM_01473	3.12e-178	phnC	3.6.3.28	-	P	ko:K02041	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
PCFPDMBM_01474	2.56e-76	phnA	-	-	P	ko:K06193	ko01120,map01120	ko00000	Alkylphosphonate utilization operon protein PhnA
PCFPDMBM_01475	0.0	yjdA	-	-	S	-	-	-	chromosome segregation
PCFPDMBM_01476	1.95e-189	yjcZ	-	-	S	-	-	-	YjcZ-like protein
PCFPDMBM_01477	5.47e-216	kdgT	-	-	U	ko:K02526	-	ko00000,ko02000	The 2-keto-3-deoxygluconate permease transports the degraded pectin products into the bacterial cell, where they serve as carbon and energy sources. This is a hydrogen coupled transport system
PCFPDMBM_01478	0.0	proP	-	-	EGP	ko:K03762	-	ko00000,ko02000	transporter
PCFPDMBM_01479	1.69e-285	wcaJ	-	-	M	ko:K03606	ko05111,map05111	ko00000,ko00001	COG2148 Sugar transferases involved in lipopolysaccharide synthesis
PCFPDMBM_01480	2.89e-310	-	-	-	S	ko:K20920	ko05111,map05111	ko00000,ko00001,ko02000	Putative beta-barrel porin 2
PCFPDMBM_01481	4.07e-120	gumB	-	-	M	ko:K20988	ko05111,map05111	ko00000,ko00001,ko02000	COG1596 Periplasmic protein involved in polysaccharide export
PCFPDMBM_01482	0.0	-	-	-	D	ko:K16554	ko05111,map05111	ko00000,ko00001,ko02000	protein involved in exopolysaccharide biosynthesis
PCFPDMBM_01483	2.35e-269	-	-	-	S	-	-	-	polysaccharide biosynthetic process
PCFPDMBM_01484	4.87e-276	-	-	-	-	-	-	-	-
PCFPDMBM_01485	1.8e-223	-	-	-	M	-	-	-	PFAM Glycosyl transferase family 2
PCFPDMBM_01486	8.77e-265	-	2.4.1.56	GT4,GT9	M	ko:K03280	ko00540,ko01100,map00540,map01100	ko00000,ko00001,ko00002,ko01000,ko01003,ko01005	glycosyl transferase group 1
PCFPDMBM_01487	1.53e-246	-	2.4.1.348	GT4	M	ko:K12995	-	ko00000,ko01000,ko01003,ko01005	PFAM Glycosyl transferase, group 1
PCFPDMBM_01488	2.53e-83	-	-	-	-	-	-	-	-
PCFPDMBM_01489	1.27e-197	-	-	-	J	-	-	-	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
PCFPDMBM_01490	7.36e-309	-	-	-	G	-	-	-	Domain of unknown function (DUF4832)
PCFPDMBM_01491	6.79e-188	murI	5.1.1.3	-	M	ko:K01776	ko00471,ko01100,map00471,map01100	ko00000,ko00001,ko01000,ko01011	Provides the (R)-glutamate required for cell wall biosynthesis
PCFPDMBM_01492	0.0	btuB	-	-	P	ko:K16092	-	ko00000,ko02000	Involved in the active translocation of vitamin B12 (cyanocobalamin) across the outer membrane to the periplasmic space. It derives its energy for transport by interacting with the trans-periplasmic membrane protein TonB
PCFPDMBM_01493	3.6e-264	trmA	2.1.1.35	-	J	ko:K00557	-	ko00000,ko01000,ko03016	Dual-specificity methyltransferase that catalyzes the formation of 5-methyluridine at position 54 (m5U54) in all tRNAs, and that of position 341 (m5U341) in tmRNA (transfer-mRNA)
PCFPDMBM_01494	5.63e-77	yijD	-	-	S	-	-	-	membrane
PCFPDMBM_01495	1.44e-140	fabR	-	-	K	ko:K22105	-	ko00000,ko03000	Represses the transcription of fabB, involved in unsaturated fatty acid (UFA) biosynthesis. By controlling UFA production, FabR directly influences the physical properties of the membrane bilayer
PCFPDMBM_01496	0.0	sthA	1.6.1.1	-	C	ko:K00322	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Conversion of NADPH, generated by peripheral catabolic pathways, to NADH, which can enter the respiratory chain for energy generation
PCFPDMBM_01497	9.59e-215	oxyR	-	-	K	ko:K04761	ko02026,map02026	ko00000,ko00001,ko03000	Transcriptional regulator
PCFPDMBM_01498	0.0	argH	2.3.1.1, 4.3.2.1	-	E	ko:K01755,ko:K14681	ko00220,ko00250,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	argininosuccinate lyase
PCFPDMBM_01499	1.74e-177	argB	2.3.1.1, 2.7.2.8	-	E	ko:K00930,ko:K22478	ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent phosphorylation of N-acetyl- L-glutamate
PCFPDMBM_01500	2.73e-240	argC	1.2.1.38	-	E	ko:K00145	ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
PCFPDMBM_01501	1.03e-287	argE	3.5.1.16	-	E	ko:K01438	ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the peptidase M20A family. ArgE subfamily
PCFPDMBM_01502	0.0	ppc	4.1.1.31	-	H	ko:K01595	ko00620,ko00680,ko00710,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00710,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
PCFPDMBM_01503	1.33e-125	yijO	-	-	K	-	-	-	Transcriptional regulator
PCFPDMBM_01504	1.29e-131	fsaB	-	-	H	ko:K08313,ko:K08314	-	ko00000,ko01000	Catalyzes the reversible formation of fructose 6- phosphate from dihydroxyacetone and D-glyceraldehyde 3-phosphate via an aldolization reaction
PCFPDMBM_01505	3.95e-252	gldA	1.1.1.261, 1.1.1.6	-	C	ko:K00005,ko:K00096	ko00561,ko00564,ko00640,ko01100,map00561,map00564,map00640,map01100	ko00000,ko00001,ko01000	glycerol dehydrogenase
PCFPDMBM_01506	0.0	katG	1.11.1.21	-	P	ko:K03782	ko00360,ko00380,ko00940,ko00983,ko01100,ko01110,map00360,map00380,map00940,map00983,map01100,map01110	ko00000,ko00001,ko01000	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
PCFPDMBM_01507	1.17e-215	metF	1.5.1.20	-	E	ko:K00297	ko00670,ko00720,ko01100,ko01120,ko01200,ko01523,map00670,map00720,map01100,map01120,map01200,map01523	ko00000,ko00001,ko00002,ko01000	Methylenetetrahydrofolate reductase
PCFPDMBM_01508	0.0	metL	1.1.1.3, 2.7.2.4	-	E	ko:K12524,ko:K12525	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	belongs to the aspartokinase family
PCFPDMBM_01509	1.83e-278	metB	2.5.1.48	-	E	ko:K01739	ko00270,ko00450,ko00920,ko01100,ko01110,ko01130,ko01230,map00270,map00450,map00920,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of L-homocysteine from O- succinyl-L-homoserine (OSHS) and hydrogen sulfide
PCFPDMBM_01510	2.54e-71	metJ	-	-	K	ko:K03764	-	ko00000,ko03000	This regulatory protein, when combined with SAM (S- adenosylmethionine) represses the expression of the methionine regulon and of enzymes involved in SAM synthesis
PCFPDMBM_01511	5.31e-48	rpmE	-	-	J	ko:K02909	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds the 23S rRNA
PCFPDMBM_01512	0.0	priA	-	-	L	ko:K04066	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
PCFPDMBM_01513	3.67e-222	cytR	-	-	K	ko:K05499	-	ko00000,ko03000	transcriptional
PCFPDMBM_01514	1.45e-148	ftsN	-	-	D	ko:K03591	-	ko00000,ko03036	Essential cell division protein that activates septal peptidoglycan synthesis and constriction of the cell. Acts on both sides of the membrane, via interaction with FtsA in the cytoplasm and interaction with the FtsQBL complex in the periplasm. These interactions may induce a conformational switch in both FtsA and FtsQBL, leading to septal peptidoglycan synthesis by FtsI and associated synthases
PCFPDMBM_01515	1.19e-119	hslV	3.4.25.2	-	O	ko:K01419	-	ko00000,ko01000,ko01002	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
PCFPDMBM_01516	7.68e-309	hslU	-	-	O	ko:K03667	-	ko00000,ko03110	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
PCFPDMBM_01517	5.64e-203	menA	2.5.1.74	-	H	ko:K02548	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01006	Belongs to the MenA family. Type 1 subfamily
PCFPDMBM_01518	1.88e-111	rraA	-	-	H	ko:K02553	-	ko00000,ko03019	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
PCFPDMBM_01520	2.68e-43	zapB	-	-	D	ko:K09892	-	ko00000,ko03036	Non-essential, abundant cell division factor that is required for proper Z-ring formation. It is recruited early to the divisome by direct interaction with FtsZ, stimulating Z-ring assembly and thereby promoting cell division earlier in the cell cycle. Its recruitment to the Z-ring requires functional FtsA or ZipA
PCFPDMBM_01521	3.4e-190	glpF	-	-	U	ko:K02440	-	ko00000,ko02000	Belongs to the MIP aquaporin (TC 1.A.8) family
PCFPDMBM_01522	0.0	glpK	2.7.1.30	-	F	ko:K00864	ko00561,ko01100,ko03320,ko04626,map00561,map01100,map03320,map04626	ko00000,ko00001,ko01000,ko04147	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
PCFPDMBM_01523	1.28e-230	glpX	3.1.3.11	-	G	ko:K02446	ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Fructose-1,6-bisphosphatase
PCFPDMBM_01524	3.3e-157	fpr	1.18.1.2, 1.19.1.1	-	C	ko:K00528	-	ko00000,ko01000	COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1
PCFPDMBM_01525	2.06e-93	yiiR	-	-	S	-	-	-	Membrane
PCFPDMBM_01526	2.39e-107	yiiQ	-	-	S	-	-	-	Protein of unknown function (DUF1454)
PCFPDMBM_01527	9.67e-174	tpiA	5.3.1.1	-	G	ko:K01803	ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
PCFPDMBM_01528	1.09e-292	-	-	-	P	-	-	-	Citrate transporter
PCFPDMBM_01529	4.27e-157	cdh	3.6.1.26	-	I	ko:K01521	ko00564,ko01110,map00564,map01110	ko00000,ko00001,ko01000	CDP-diacylglycerol pyrophosphatase
PCFPDMBM_01530	4.88e-236	sbp	-	-	P	ko:K02048	ko00920,ko02010,map00920,map02010	ko00000,ko00001,ko00002,ko02000	sulfate ABC transporter
PCFPDMBM_01531	4.31e-230	pfkA	2.7.1.11	-	F	ko:K00850	ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04152,ko05230,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04152,map05230	ko00000,ko00001,ko00002,ko01000,ko01009,ko03019	Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions
PCFPDMBM_01532	9.03e-205	fieF	-	-	P	ko:K13283	-	ko00000,ko02000	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
PCFPDMBM_01533	2.14e-99	cpxP	-	-	NPTU	ko:K06006	-	ko00000,ko03110	Repressor of the Cpx envelope stress response pathway which occurs via periplasmic interactions with CpxA
PCFPDMBM_01534	4.29e-161	cpxR	-	-	K	ko:K07662,ko:K19610	ko01503,ko02020,map01503,map02020	ko00000,ko00001,ko00002,ko02022	Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PCFPDMBM_01535	0.0	cpxA	2.7.13.3	-	T	ko:K07640	ko01503,ko02020,map01503,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
PCFPDMBM_01536	2.59e-152	yiiM	-	-	S	-	-	-	MOSC domain containing protein
PCFPDMBM_01537	6.13e-149	sodA	1.15.1.1	-	C	ko:K04564	ko04013,ko04068,ko04146,ko04211,ko04212,ko04213,ko05016,map04013,map04068,map04146,map04211,map04212,map04213,map05016	ko00000,ko00001,ko01000	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
PCFPDMBM_01538	3.03e-195	rhaR	-	-	K	ko:K02854	-	ko00000,ko03000	Activates expression of the rhaSR operon in response to L-rhamnose
PCFPDMBM_01539	6.19e-202	rhaS	-	-	K	ko:K02855,ko:K17736	-	ko00000,ko03000	Activates expression of the rhaBAD and rhaT operons
PCFPDMBM_01540	0.0	rhaB	2.7.1.5	-	F	ko:K00848	ko00040,ko00051,ko01120,map00040,map00051,map01120	ko00000,ko00001,ko01000	Involved in the catabolism of L-rhamnose (6-deoxy-L- mannose). Catalyzes the transfer of the gamma-phosphate group from ATP to the 1-hydroxyl group of L-rhamnulose to yield L-rhamnulose 1-phosphate
PCFPDMBM_01541	1.86e-306	rhaA	5.3.1.14	-	G	ko:K01813	ko00051,ko01120,map00051,map01120	ko00000,ko00001,ko01000	L-rhamnose isomerase
PCFPDMBM_01542	5.09e-200	rhaD	4.1.2.19	-	H	ko:K01629	ko00040,ko00051,ko01120,map00040,map00051,map01120	ko00000,ko00001,ko01000	Catalyzes the reversible cleavage of L-rhamnulose-1- phosphate to dihydroxyacetone phosphate (DHAP) and L-lactaldehyde
PCFPDMBM_01543	1.94e-221	-	-	-	G	ko:K10555,ko:K10559	ko02010,ko02024,map02010,map02024	ko00000,ko00001,ko00002,ko02000	(ABC) transporter
PCFPDMBM_01544	0.0	-	3.6.3.17	-	P	ko:K02056,ko:K10441,ko:K10542,ko:K10545,ko:K10562,ko:K17204	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	import. Responsible for energy coupling to the transport system
PCFPDMBM_01545	2e-219	-	-	-	U	ko:K10560	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
PCFPDMBM_01546	5.3e-220	-	-	-	U	ko:K10561	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
PCFPDMBM_01547	8.71e-259	fucO	1.1.1.1	-	C	ko:K00001	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	alcohol dehydrogenase
PCFPDMBM_01548	1.12e-69	rhaM	5.1.3.32	-	G	ko:K03534	-	ko00000,ko01000	Involved in the anomeric conversion of L-rhamnose
PCFPDMBM_01549	6.37e-296	rafB	-	-	G	ko:K02532	-	ko00000,ko02000	Major facilitator superfamily
PCFPDMBM_01550	0.0	rafA	3.2.1.22	-	G	ko:K07407	ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603	ko00000,ko00001,ko01000	alpha-galactosidase
PCFPDMBM_01551	2.1e-222	rafR	-	-	K	ko:K02529	-	ko00000,ko03000	PFAM Periplasmic binding protein LacI transcriptional regulator
PCFPDMBM_01552	2.78e-121	sinR	-	-	K	-	-	-	Transcriptional regulator
PCFPDMBM_01553	5.39e-144	azlC	-	-	E	-	-	-	branched-chain amino acid
PCFPDMBM_01554	1.11e-57	-	-	-	S	-	-	-	Branched-chain amino acid transport protein (AzlD)
PCFPDMBM_01555	3.53e-35	-	-	-	S	-	-	-	Protein of unknown function (DUF1471)
PCFPDMBM_01556	1.24e-166	fdhD	-	-	C	ko:K02379	-	ko00000	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
PCFPDMBM_01557	1.87e-139	fdoG	1.17.1.9, 1.17.5.3	-	C	ko:K00123,ko:K08348	ko00630,ko00680,ko01100,ko01120,ko01200,ko02020,map00630,map00680,map01100,map01120,map01200,map02020	ko00000,ko00001,ko01000	PFAM Molybdopterin oxidoreductase Fe4S4 region
PCFPDMBM_01558	0.0	fdoG	1.17.1.9, 1.17.5.3	-	C	ko:K00123,ko:K08348	ko00630,ko00680,ko01100,ko01120,ko01200,ko02020,map00630,map00680,map01100,map01120,map01200,map02020	ko00000,ko00001,ko01000	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
PCFPDMBM_01559	4.48e-231	fdoH	-	-	C	ko:K00124,ko:K08349	ko00630,ko00680,ko01100,ko01120,ko01200,ko02020,map00630,map00680,map01100,map01120,map01200,map02020	ko00000,ko00001	TIGRFAM formate dehydrogenase, beta subunit
PCFPDMBM_01560	1.15e-150	fdoI	-	-	C	ko:K00127,ko:K08350	ko00630,ko00680,ko01100,ko01120,ko01200,ko02020,map00630,map00680,map01100,map01120,map01200,map02020	ko00000,ko00001	formate dehydrogenase
PCFPDMBM_01561	4.62e-224	fdhE	-	-	O	ko:K02380	-	ko00000	Necessary for formate dehydrogenase activity
PCFPDMBM_01562	1.32e-10	pagC	-	-	M	ko:K07804	ko02020,map02020	ko00000,ko00001	Virulence
PCFPDMBM_01563	7.23e-238	yiiD	-	-	K	-	-	-	Putative thioesterase (yiiD_Cterm)
PCFPDMBM_01564	8.59e-98	dtd	-	-	J	ko:K07560	-	ko00000,ko01000,ko03016	rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
PCFPDMBM_01565	2.16e-158	rbn	-	-	K	ko:K07058	-	ko00000	UPF0761 membrane protein
PCFPDMBM_01566	1.16e-135	yihX	3.1.3.10	-	S	ko:K07025,ko:K20866	ko00010,ko01120,map00010,map01120	ko00000,ko00001,ko01000	TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant 3
PCFPDMBM_01567	2.15e-179	yihW	-	-	K	-	-	-	Transcriptional regulator
PCFPDMBM_01568	1.56e-194	yihV	2.7.1.184, 2.7.1.3	-	G	ko:K00846,ko:K18478	ko00051,ko01100,ko01120,map00051,map01100,map01120	ko00000,ko00001,ko01000,ko04147	Phosphorylates 6-deoxy-6-sulfo-D-fructose (SF) to 6- deoxy-6-sulfo-D-fructose 1-phosphate (SFP)
PCFPDMBM_01569	3.04e-202	yihU	1.1.1.373, 1.1.1.61	-	C	ko:K08318	ko00650,ko01100,ko01200,map00650,map01100,map01200	ko00000,ko00001,ko01000	Reduces 3-sulfolactaldehyde (SLA) to 2,3- dihydroxypropane 1-sulfonate (DHPS)
PCFPDMBM_01570	3.99e-200	yihT	4.1.2.40, 4.1.2.57	-	G	ko:K01635,ko:K01671	ko00052,ko01100,ko02024,map00052,map01100,map02024	ko00000,ko00001,ko01000	Cleaves 6-deoxy-6-sulfo-D-fructose 1-phosphate (SFP) to form dihydroxyacetone phosphate (DHAP) and 3-sulfolactaldehyde (SLA)
PCFPDMBM_01571	0.0	yihS	5.3.1.31	-	G	ko:K18479	-	ko00000,ko01000	Catalyzes the isomerization of sulfoquinovose (SQ) to 6- deoxy-6-sulfo-D-fructose (SF)
PCFPDMBM_01572	0.0	yihQ	3.2.1.199	GH31	G	ko:K15922	-	ko00000,ko01000	Belongs to the glycosyl hydrolase 31 family
PCFPDMBM_01573	0.0	yihP	-	-	G	ko:K03292	-	ko00000	transporter
PCFPDMBM_01574	0.0	yihO	-	-	G	ko:K03292	-	ko00000	transporter
PCFPDMBM_01575	1.59e-129	ompL	-	-	S	ko:K22110	-	ko00000,ko02000	Oligogalacturonate-specific porin protein (KdgM)
PCFPDMBM_01576	0.0	typA	-	-	T	ko:K06207	-	ko00000	GTP-binding protein
PCFPDMBM_01577	0.0	glnA	6.3.1.2	-	E	ko:K01915	ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727	ko00000,ko00001,ko01000,ko04147	glutamine synthetase
PCFPDMBM_01578	8.56e-247	glnL	2.7.13.3	-	T	ko:K07708	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Signal transduction histidine kinase, nitrogen specific
PCFPDMBM_01579	0.0	glnG	-	-	T	ko:K07712	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
PCFPDMBM_01580	0.0	hemN	1.3.98.3	-	H	ko:K02495	ko00860,ko01100,ko01110,map00860,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Belongs to the anaerobic coproporphyrinogen-III oxidase family
PCFPDMBM_01581	3.3e-66	yihI	-	-	S	ko:K09894	-	ko00000	A GTPase-activating protein (GAP) that modifies Der EngA GTPase function. May play a role in ribosome biogenesis
PCFPDMBM_01582	2.05e-138	engB	-	-	D	ko:K03978	-	ko00000,ko03036	Necessary for normal cell division and for the maintenance of normal septation
PCFPDMBM_01583	0.0	polA	2.7.7.7	-	L	ko:K02335	ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440	ko00000,ko00001,ko01000,ko03032,ko03400	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
PCFPDMBM_01584	1.33e-199	yihG	-	-	I	-	-	-	Phosphate acyltransferases
PCFPDMBM_01585	6.43e-146	dsbA	-	-	O	ko:K03673	ko01503,map01503	ko00000,ko00001,ko00002,ko03110	Thiol disulfide interchange protein
PCFPDMBM_01586	1.51e-234	srkA	-	-	F	-	-	-	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
PCFPDMBM_01587	1.68e-55	yihD	-	-	S	ko:K09896	-	ko00000	protein conserved in bacteria
PCFPDMBM_01588	8.15e-97	mobA	2.7.7.77	-	H	ko:K03752	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko01000	Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor
PCFPDMBM_01589	1.67e-92	mobB	2.7.7.77	-	H	ko:K03753,ko:K13818	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko01000	molybdopterin-guanine dinucleotide biosynthesis protein
PCFPDMBM_01590	8.46e-51	-	-	-	IQ	ko:K02078	-	ko00000,ko00001	Phosphopantetheine attachment site
PCFPDMBM_01591	1.12e-103	-	-	-	I	-	-	-	FabA-like domain
PCFPDMBM_01592	3.85e-135	-	1.1.1.100, 1.1.1.173, 1.1.1.377, 1.1.1.378	-	IQ	ko:K00059,ko:K18337	ko00051,ko00061,ko00333,ko00780,ko01040,ko01100,ko01120,ko01130,ko01212,map00051,map00061,map00333,map00780,map01040,map01100,map01120,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	3-oxoacyl- acyl-carrier-protein reductase
PCFPDMBM_01593	3.49e-52	-	2.7.8.7	-	I	ko:K00997	ko00770,map00770	ko00000,ko00001,ko01000	Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
PCFPDMBM_01594	4.06e-255	-	-	-	U	-	-	-	hemolysin activation secretion protein
PCFPDMBM_01595	5.48e-287	-	-	-	U	-	-	-	haemagglutination activity domain
PCFPDMBM_01596	4.44e-159	-	-	-	S	-	-	-	alpha beta
PCFPDMBM_01597	0.0	-	-	-	S	-	-	-	TIGRFAM outer membrane autotransporter barrel
PCFPDMBM_01598	5.13e-211	yghU	-	-	O	ko:K11209	-	ko00000,ko01000	Belongs to the GST superfamily
PCFPDMBM_01599	4.53e-21	-	-	-	-	-	-	-	-
PCFPDMBM_01600	5.12e-228	-	-	-	T	-	-	-	Diguanylate cyclase
PCFPDMBM_01601	8.63e-164	fucR	-	-	K	ko:K02430	-	ko00000,ko03000	transcriptional regulator
PCFPDMBM_01602	4.85e-277	trg_2	-	-	NT	ko:K03406,ko:K05874,ko:K05875,ko:K05876,ko:K05877	ko02020,ko02030,map02020,map02030	ko00000,ko00001,ko02035	chemotaxis, protein
PCFPDMBM_01603	0.0	-	-	-	S	-	-	-	Autotransporter beta-domain
PCFPDMBM_01604	5.08e-205	yghX	3.1.1.45	-	Q	ko:K01061	ko00361,ko00364,ko00623,ko01100,ko01110,ko01120,ko01130,map00361,map00364,map00623,map01100,map01110,map01120,map01130	ko00000,ko00001,ko01000	dienelactone hydrolase
PCFPDMBM_01605	2.3e-254	yghZ	-	-	C	ko:K19265	-	ko00000,ko01000	reductase
PCFPDMBM_01606	3.11e-106	yqhA	-	-	S	-	-	-	UPF0114 protein
PCFPDMBM_01607	1.53e-113	-	-	-	-	-	-	-	-
PCFPDMBM_01608	8.87e-88	-	-	-	-	-	-	-	-
PCFPDMBM_01609	6.93e-87	-	-	-	-	-	-	-	-
PCFPDMBM_01610	8.72e-203	yghA	-	-	IQ	-	-	-	Dehydrogenases with different specificities (Related to short-chain alcohol dehydrogenases)
PCFPDMBM_01611	2.3e-91	exbD	-	-	U	ko:K03559	-	ko00000,ko02000	Biopolymer transport protein, ExbD
PCFPDMBM_01612	4.17e-153	exbB	-	-	U	ko:K03561	-	ko00000,ko02000	tonB-system energizer ExbB
PCFPDMBM_01613	9.47e-281	metC	4.4.1.8	-	E	ko:K01760	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	cystathionine beta-lyase
PCFPDMBM_01614	1.01e-148	yghB	-	-	S	-	-	-	Pfam SNARE associated Golgi protein
PCFPDMBM_01615	1.68e-198	yqhC	-	-	K	-	-	-	transcriptional regulator
PCFPDMBM_01616	9e-275	yqhD	-	-	C	ko:K08325	ko00640,map00640	ko00000,ko00001,ko01000	alcohol dehydrogenase
PCFPDMBM_01617	3.31e-200	dkgA	1.1.1.346	-	S	ko:K06221,ko:K06222	-	ko00000,ko01000	reductase
PCFPDMBM_01618	0.0	ygiQ	-	-	C	-	-	-	UPF0313 protein
PCFPDMBM_01619	1.13e-303	trkG	-	-	P	ko:K03498	-	ko00000,ko02000	Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA
PCFPDMBM_01620	0.0	ftsP	-	-	D	ko:K04753	-	ko00000	Cell division protein that is required for growth during stress conditions. May be involved in protecting or stabilizing the divisomal assembly under conditions of stress
PCFPDMBM_01621	1.54e-165	plsC	2.3.1.51	-	I	ko:K00655	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family
PCFPDMBM_01622	0.0	parC	-	-	L	ko:K02621	-	ko00000,ko01000,ko02048,ko03032,ko03036	Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PCFPDMBM_01623	5.14e-82	ygiW	-	-	S	-	-	-	PFAM conserved
PCFPDMBM_01624	3.12e-143	qseB	-	-	K	ko:K07666	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko02022	response regulator
PCFPDMBM_01625	6.65e-274	qseC	2.7.13.3	-	T	ko:K07645	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Integral membrane sensor signal transduction histidine kinase
PCFPDMBM_01626	1.43e-142	mdaB	-	-	S	ko:K03923	-	ko00000	modulator of drug activity B
PCFPDMBM_01627	7.91e-70	ygiN	-	-	S	-	-	-	monooxygenase
PCFPDMBM_01628	2.76e-99	ygaU	-	-	S	-	-	-	peptidoglycan-binding protein
PCFPDMBM_01629	2.6e-118	-	-	-	-	-	-	-	-
PCFPDMBM_01630	3.5e-292	ugl	3.2.1.180	GH88	S	ko:K18581	-	ko00000,ko01000	Hydrolase
PCFPDMBM_01631	1.66e-286	-	-	-	P	ko:K02532	-	ko00000,ko02000	Major facilitator superfamily
PCFPDMBM_01632	0.0	YPO0843	-	-	S	-	-	-	protein conserved in bacteria
PCFPDMBM_01633	8.76e-200	-	-	-	K	-	-	-	AraC family transcriptional regulator
PCFPDMBM_01634	0.0	parE	-	-	L	ko:K02622	-	ko00000,ko01000,ko02048,ko03032,ko03036	Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PCFPDMBM_01635	2.27e-139	yqiA	-	-	S	ko:K07000	-	ko00000	esterase
PCFPDMBM_01636	7.49e-197	cpdA	3.1.4.53	-	S	ko:K03651	ko00230,ko02025,map00230,map02025	ko00000,ko00001,ko01000	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
PCFPDMBM_01637	3.04e-100	yqiB	-	-	S	ko:K09920	-	ko00000	Protein of unknown function (DUF1249)
PCFPDMBM_01638	1.5e-141	nudF	3.6.1.13	-	L	ko:K01515	ko00230,map00230	ko00000,ko00001,ko01000	COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes
PCFPDMBM_01639	1.99e-304	tolC	-	-	MU	ko:K12340	ko01501,ko01503,ko02020,ko03070,ko04626,ko05133,map01501,map01503,map02020,map03070,map04626,map05133	ko00000,ko00001,ko00002,ko01504,ko02000,ko02044	type I secretion outer membrane protein, TolC
PCFPDMBM_01640	4.59e-142	ygiB	-	-	S	-	-	-	Belongs to the UPF0441 family
PCFPDMBM_01641	5.94e-284	ygiC	-	-	E	-	-	-	Glutathionylspermidine synthase
PCFPDMBM_01642	2.71e-188	ygiD	-	-	C	ko:K15777	ko00965,map00965	ko00000,ko00001,ko01000	PFAM Extradiol ring-cleavage dioxygenase, class III
PCFPDMBM_01643	1.76e-161	zupT	-	-	P	ko:K07238	-	ko00000,ko02000	Mediates zinc uptake. May also transport other divalent cations
PCFPDMBM_01644	6.57e-144	ribB	3.5.4.25, 4.1.99.12	-	H	ko:K02858,ko:K14652	ko00740,ko00790,ko01100,ko01110,map00740,map00790,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
PCFPDMBM_01645	6.77e-55	yqiC	-	-	S	ko:K09806	-	ko00000	protein conserved in bacteria
PCFPDMBM_01646	0.0	hldE	2.7.1.167, 2.7.7.70	-	H	ko:K03272,ko:K21344	ko00540,ko01100,map00540,map01100	ko00000,ko00001,ko00002,ko01000,ko01005	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
PCFPDMBM_01647	0.0	glnE	2.7.7.42, 2.7.7.89	-	H	ko:K00982	-	ko00000,ko01000	Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell
PCFPDMBM_01648	6.95e-284	ygiF	3.6.1.25	-	S	ko:K18446	-	ko00000,ko01000	Adenylate cyclase
PCFPDMBM_01649	3.89e-138	ygiM	-	-	T	ko:K07184	-	ko00000	sh3 domain protein
PCFPDMBM_01650	2.12e-293	cca	2.7.7.72	-	F	ko:K00974	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. Also shows phosphatase, 2'- nucleotidase and 2',3'-cyclic phosphodiesterase activities. These phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases
PCFPDMBM_01651	1.61e-185	uppP	3.6.1.27	-	V	ko:K06153	ko00550,map00550	ko00000,ko00001,ko01000,ko01011	Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
PCFPDMBM_01652	1.17e-75	folB	1.13.11.81, 4.1.2.25, 5.1.99.8	-	H	ko:K01633	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
PCFPDMBM_01653	5.5e-141	plsY	2.3.1.15	-	I	ko:K08591	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
PCFPDMBM_01654	3.66e-188	ureD	-	-	O	ko:K03190	-	ko00000	Required for maturation of urease via the functional incorporation of the urease nickel metallocenter
PCFPDMBM_01655	5.07e-62	ureA	3.5.1.5	-	E	ko:K01430,ko:K14048	ko00220,ko00230,ko00791,ko01100,ko01120,ko05120,map00220,map00230,map00791,map01100,map01120,map05120	ko00000,ko00001,ko01000	Belongs to the urease gamma subunit family
PCFPDMBM_01656	1.67e-62	ureB	3.5.1.5	-	E	ko:K01429	ko00220,ko00230,ko00791,ko01100,ko01120,map00220,map00230,map00791,map01100,map01120	ko00000,ko00001,ko01000	Belongs to the urease beta subunit family
PCFPDMBM_01657	0.0	ureC	3.5.1.5	-	E	ko:K01428	ko00220,ko00230,ko00791,ko01100,ko01120,ko05120,map00220,map00230,map00791,map01100,map01120,map05120	ko00000,ko00001,ko01000	Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family
PCFPDMBM_01658	2.88e-94	ureE	-	-	O	ko:K03187	-	ko00000	Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly
PCFPDMBM_01659	6.28e-112	ureJ	-	-	O	ko:K03192	-	ko00000	urease accessory protein
PCFPDMBM_01660	8.29e-148	ureF	-	-	O	ko:K03188	-	ko00000	Required for maturation of urease via the functional incorporation of the urease nickel metallocenter
PCFPDMBM_01661	2.52e-142	ureG	-	-	H	ko:K03189	-	ko00000	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
PCFPDMBM_01662	5.99e-306	-	-	-	O	-	-	-	Subtilase family
PCFPDMBM_01663	1.75e-85	-	-	-	K	-	-	-	helix_turn_helix, Lux Regulon
PCFPDMBM_01664	1.35e-237	tsaD	2.3.1.234	-	J	ko:K01409	-	ko00000,ko01000,ko03016	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
PCFPDMBM_01665	4.94e-40	rpsU	-	-	J	ko:K02970	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bS21 family
PCFPDMBM_01666	0.0	dnaG	-	-	L	ko:K02316	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
PCFPDMBM_01667	0.0	rpoD	-	-	K	ko:K03086	-	ko00000,ko03021	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
PCFPDMBM_01668	1.26e-117	mug	3.2.2.28	-	L	ko:K03649	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Excises ethenocytosine and uracil, which can arise by alkylation or deamination of cytosine, respectively, from the corresponding mispairs with guanine in ds-DNA. It is capable of hydrolyzing the carbon-nitrogen bond between the sugar-phosphate backbone of the DNA and the mispaired base. The complementary strand guanine functions in substrate recognition. Required for DNA damage lesion repair in stationary-phase cells
PCFPDMBM_01671	9.77e-48	-	-	-	K	ko:K03088	-	ko00000,ko03021	DNA-templated transcription, initiation
PCFPDMBM_01673	8.58e-85	-	-	-	S	-	-	-	Putative inner membrane protein (DUF1819)
PCFPDMBM_01674	1.24e-110	-	-	-	S	-	-	-	Domain of unknown function (DUF1788)
PCFPDMBM_01675	0.0	-	-	-	L	-	-	-	DNA recombination
PCFPDMBM_01676	0.0	-	-	-	V	-	-	-	COG1002 Type II restriction enzyme, methylase subunits
PCFPDMBM_01677	7.74e-128	-	-	-	S	-	-	-	AAA domain, putative AbiEii toxin, Type IV TA system
PCFPDMBM_01678	3.54e-48	-	-	-	-	-	-	-	-
PCFPDMBM_01679	0.0	-	-	-	S	-	-	-	PglZ domain
PCFPDMBM_01680	0.0	-	3.4.21.53	-	O	ko:K01338	ko04112,map04112	ko00000,ko00001,ko01000,ko01002	ATP-dependent Lon-type protease
PCFPDMBM_01683	3.82e-189	hdfR	-	-	K	-	-	-	Negatively regulates the transcription of the flagellar master operon flhDC by binding to the upstream region of the operon
PCFPDMBM_01684	2.46e-70	yifE	-	-	S	ko:K09897	-	ko00000	Protein of unknown function, DUF
PCFPDMBM_01685	0.0	comM	-	-	O	ko:K07391	-	ko00000	ATPase with chaperone activity
PCFPDMBM_01686	0.0	ilvG	2.2.1.6	-	H	ko:K01652	ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	acetolactate synthase
PCFPDMBM_01687	2.3e-53	ilvM	2.2.1.6	-	S	ko:K11258	ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	acetolactate synthase
PCFPDMBM_01688	1.68e-226	ilvE	2.6.1.42	-	E	ko:K00826	ko00270,ko00280,ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00270,map00280,map00290,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
PCFPDMBM_01689	0.0	ilvD	4.2.1.9	-	H	ko:K01687	ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the IlvD Edd family
PCFPDMBM_01690	0.0	ilvA	4.3.1.19	-	E	ko:K01754	ko00260,ko00290,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00290,map01100,map01110,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
PCFPDMBM_01691	1.31e-212	ilvY	-	-	K	ko:K02521	-	ko00000,ko03000	transcriptional regulator
PCFPDMBM_01692	0.0	ilvC	1.1.1.86	-	H	ko:K00053	ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
PCFPDMBM_01693	2.6e-63	ppiC	5.2.1.8	-	O	ko:K03769	-	ko00000,ko01000,ko03110	PPIC-type PPIASE domain
PCFPDMBM_01694	2.83e-58	ppiC	5.2.1.8	-	G	ko:K03769	-	ko00000,ko01000,ko03110	PPIC-type PPIASE domain
PCFPDMBM_01695	0.0	rep	3.6.4.12	-	L	ko:K03656,ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	it can initiate unwinding at a nick in the DNA. It binds to the single-stranded DNA and acts in a progressive fashion along the DNA in the 3' to 5' direction
PCFPDMBM_01696	0.0	gppA	3.6.1.11, 3.6.1.40	-	FP	ko:K01524	ko00230,map00230	ko00000,ko00001,ko01000	Catalyzes the conversion of pppGpp to ppGpp. Guanosine pentaphosphate (pppGpp) is a cytoplasmic signaling molecule which together with ppGpp controls the stringent response , an adaptive process that allows bacteria to respond to amino acid starvation, resulting in the coordinated regulation of numerous cellular activities
PCFPDMBM_01697	3.46e-303	rhlB	3.6.4.13	-	JKL	ko:K03732	ko03018,map03018	ko00000,ko00001,ko00002,ko01000,ko03019	DEAD-box RNA helicase involved in RNA degradation. Has RNA-dependent ATPase activity and unwinds double-stranded RNA
PCFPDMBM_01698	1.82e-75	trxA	-	-	O	ko:K03671	ko04621,ko05418,map04621,map05418	ko00000,ko00001,ko03110	Belongs to the thioredoxin family
PCFPDMBM_01699	4.7e-300	rho	-	-	K	ko:K03628	ko03018,map03018	ko00000,ko00001,ko03019,ko03021	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
PCFPDMBM_01700	2.97e-247	wecA	2.7.8.33, 2.7.8.35	-	M	ko:K02851	-	ko00000,ko01000,ko01003,ko01005	Catalyzes the transfer of the GlcNAc-1-phosphate moiety from UDP-GlcNAc onto the carrier lipid undecaprenyl phosphate (C55-P), yielding GlcNAc-pyrophosphoryl-undecaprenyl (GlcNAc-PP- C55)
PCFPDMBM_01701	1.6e-246	wzzE	-	-	M	ko:K05790	-	ko00000	Modulates the polysaccharide chain length of enterobacterial common antigen (ECA)
PCFPDMBM_01702	3.47e-256	wecB	3.2.1.183, 5.1.3.14	-	M	ko:K01791,ko:K08068	ko00520,ko01100,ko05111,map00520,map01100,map05111	ko00000,ko00001,ko00002,ko01000,ko01005	Catalyzes the reversible epimerization at C-2 of UDP-N- acetylglucosamine (UDP-GlcNAc) and thereby provides bacteria with UDP-N-acetylmannosamine (UDP-ManNAc), the activated donor of ManNAc residues
PCFPDMBM_01703	8.42e-299	wecC	1.1.1.336	-	M	ko:K02472	ko00520,ko05111,map00520,map05111	ko00000,ko00001,ko01000	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
PCFPDMBM_01704	2.09e-144	wecD	2.3.1.210	-	K	ko:K16704	-	ko00000,ko01000	Catalyzes the acetylation of dTDP-fucosamine (dTDP-4- amino-4,6-dideoxy-D-galactose) to dTDP-Fuc4NAc, which is utilized in the biosynthesis of the enterobacterial common antigen (ECA)
PCFPDMBM_01705	3.3e-260	wecE	2.6.1.59	-	E	ko:K02805	-	ko00000,ko01000,ko01007	Catalyzes the synthesis of dTDP-4-amino-4,6-dideoxy-D- galactose (dTDP-Fuc4N) from dTDP-4-keto-6-deoxy-D-glucose (dTDP-D- Glc4O) and L-glutamate
PCFPDMBM_01706	3.14e-276	wzxE	-	-	U	ko:K03328,ko:K16693	-	ko00000,ko02000	Mediates the transbilayer movement of Und-PP-GlcNAc- ManNAcA-Fuc4NAc (lipid III) from the inner to the outer leaflet of the cytoplasmic membrane during the assembly of enterobacterial common antigen (ECA)
PCFPDMBM_01707	2.81e-257	wecF	2.4.1.325	GT56	CG	ko:K12582	-	ko00000,ko01000,ko01003	Catalyzes the synthesis of Und-PP-GlcNAc-ManNAcA-Fuc4NAc (Lipid III), the third lipid-linked intermediate involved in ECA synthesis
PCFPDMBM_01708	6.87e-311	wzyE	-	-	S	ko:K02853	-	ko00000,ko01000,ko01003	Probably involved in the polymerization of enterobacterial common antigen (ECA) trisaccharide repeat units
PCFPDMBM_01709	1.94e-164	rffM	2.4.1.180	GT26	M	ko:K02852	-	ko00000,ko01000,ko01003	Catalyzes the synthesis of Und-PP-GlcNAc-ManNAcA (Lipid II), the second lipid-linked intermediate involved in enterobacterial common antigen (ECA) synthesis
PCFPDMBM_01710	5.69e-315	yifK	-	-	E	ko:K03293	-	ko00000	'involved in the transport across the cytoplasmic membrane of D-alanine, D-serine and glycine'
PCFPDMBM_01715	6.27e-234	-	-	-	S	-	-	-	Protein involved in biological_process
PCFPDMBM_01716	1.61e-274	hemY	-	-	H	ko:K02498	-	ko00000	enzyme of heme biosynthesis
PCFPDMBM_01717	3.6e-219	hemX	2.1.1.107, 4.2.1.75	-	H	ko:K02496,ko:K13543	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	ko00000,ko00001,ko00002,ko01000	enzyme of heme biosynthesis
PCFPDMBM_01718	6.7e-157	hemD	4.2.1.75	-	H	ko:K01719	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	ko00000,ko00001,ko00002,ko01000	Uroporphyrinogen-III synthase
PCFPDMBM_01719	1.52e-184	hemC	2.5.1.61	-	H	ko:K01749	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	ko00000,ko00001,ko00002,ko01000	Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps
PCFPDMBM_01720	0.0	cyaA	4.6.1.1	-	F	ko:K05851	ko00230,ko02026,ko05111,map00230,map02026,map05111	ko00000,ko00001,ko01000	Adenylate cyclase
PCFPDMBM_01721	7.19e-74	cyaY	-	-	P	ko:K06202	-	ko00000	Belongs to the frataxin family
PCFPDMBM_01722	5.99e-37	yifL	-	-	N	-	-	-	Prokaryotic lipoprotein-attachment site
PCFPDMBM_01723	6.19e-200	dapF	5.1.1.7	-	E	ko:K01778	ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
PCFPDMBM_01724	3.5e-157	yigA	-	-	S	ko:K09921	-	ko00000	protein conserved in bacteria
PCFPDMBM_01725	5.12e-212	xerC	-	-	D	ko:K03733	-	ko00000,ko03036	Belongs to the 'phage' integrase family. XerC subfamily
PCFPDMBM_01726	1.37e-160	yigB	3.1.3.102, 3.1.3.104	-	S	ko:K20862	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Hydrolase
PCFPDMBM_01727	0.0	uvrD	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	it can initiate unwinding at a nick in the DNA. It binds to the single-stranded DNA and acts in a progressive fashion along the DNA in the 3' to 5' direction
PCFPDMBM_01728	6.28e-221	corA	-	-	P	ko:K03284	-	ko00000,ko02000	Mediates influx of magnesium ions
PCFPDMBM_01729	2.14e-203	rarD	-	-	S	ko:K05786	-	ko00000,ko02000	TIGRFAM RarD protein
PCFPDMBM_01730	1.24e-104	yigI	-	-	Q	-	-	-	Thioesterase-like superfamily
PCFPDMBM_01731	1.57e-199	pldA	3.1.1.32, 3.1.1.4	-	M	ko:K01058	ko00564,ko00565,ko00590,ko00591,ko00592,ko01100,ko01110,map00564,map00565,map00590,map00591,map00592,map01100,map01110	ko00000,ko00001,ko01000	Phospholipase
PCFPDMBM_01732	0.0	recQ	3.6.4.12	-	L	ko:K03654	ko03018,map03018	ko00000,ko00001,ko01000,ko03400	DNA helicase
PCFPDMBM_01733	2.06e-137	rhtC	-	-	E	ko:K05835	-	ko00000,ko02000	threonine efflux protein
PCFPDMBM_01734	9.78e-136	rhtB	-	-	E	ko:K05834	-	ko00000,ko02000	efflux protein
PCFPDMBM_01735	3.22e-246	pldB	3.1.1.5	-	I	ko:K01048	ko00564,map00564	ko00000,ko00001,ko01000	PFAM Alpha beta hydrolase
PCFPDMBM_01736	1.46e-194	yigL	-	-	S	-	-	-	Hydrolase
PCFPDMBM_01737	3.2e-210	yigM	-	-	EG	-	-	-	COG0697 Permeases of the drug metabolite transporter (DMT) superfamily
PCFPDMBM_01738	3.13e-226	metR	-	-	K	ko:K03576	-	ko00000,ko03000	transcriptional regulator
PCFPDMBM_01739	0.0	metE	2.1.1.14	-	E	ko:K00549	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
PCFPDMBM_01740	2.69e-43	-	-	-	-	-	-	-	-
PCFPDMBM_01741	1.03e-46	-	-	-	S	-	-	-	Protein of unknown function (DUF2778)
PCFPDMBM_01742	5.79e-67	-	-	-	S	ko:K11903	ko02025,ko03070,map02025,map03070	ko00000,ko00001,ko00002,ko02044	Type VI secretion system effector
PCFPDMBM_01743	1.16e-187	ysgA	3.1.1.45	-	Q	ko:K01061	ko00361,ko00364,ko00623,ko01100,ko01110,ko01120,ko01130,map00361,map00364,map00623,map01100,map01110,map01120,map01130	ko00000,ko00001,ko01000	Dienelactone hydrolase
PCFPDMBM_01744	4.28e-176	udp	2.4.2.3	-	F	ko:K00757	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1- phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis
PCFPDMBM_01745	5.22e-305	rmuC	-	-	V	ko:K09760	-	ko00000	DNA Recombination protein RmuC
PCFPDMBM_01746	6.89e-181	ubiE	2.1.1.163, 2.1.1.201	-	H	ko:K03183	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2)
PCFPDMBM_01747	4.03e-137	yigP	-	-	S	ko:K03690	-	ko00000	protein conserved in bacteria
PCFPDMBM_01748	0.0	ubiB	-	-	S	ko:K03688	-	ko00000	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
PCFPDMBM_01749	1.96e-45	tatA	-	-	U	ko:K03116	ko03060,ko03070,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system
PCFPDMBM_01750	1.79e-100	tatB	-	-	U	ko:K03117	ko03060,ko03070,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation
PCFPDMBM_01751	9.84e-163	tatC	-	-	U	ko:K03118	ko03060,ko03070,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides
PCFPDMBM_01752	3.39e-181	tatD	-	-	L	ko:K03424	-	ko00000,ko01000	3'-5' exonuclease that prefers single-stranded DNA and RNA. May play a role in the H(2)O(2)-induced DNA damage repair
PCFPDMBM_01753	2.19e-111	rfaH	-	-	K	ko:K05785	-	ko00000,ko03000	Enhances distal genes transcription elongation in a specialized subset of operons that encode extracytoplasmic components. RfaH is recruited into a multi-component RNA polymerase complex by the ops element, which is a short conserved DNA sequence located downstream of the main promoter of these operons. Once bound, RfaH suppresses pausing and inhibits Rho- dependent and intrinsic termination at a subset of sites. Termination signals are bypassed, which allows complete synthesis of long RNA chains
PCFPDMBM_01754	0.0	ubiD	4.1.1.98	-	H	ko:K03182	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol, an intermediate step in ubiquinone biosynthesis
PCFPDMBM_01755	4.14e-164	fre	1.16.1.3, 1.17.1.1, 1.5.1.41	-	C	ko:K00523,ko:K05368,ko:K20256	ko00520,ko00740,ko00860,ko01100,ko02024,map00520,map00740,map00860,map01100,map02024	ko00000,ko00001,ko01000	COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases
PCFPDMBM_01756	2.31e-277	fadA	2.3.1.16	-	I	ko:K00632	ko00071,ko00280,ko00281,ko00362,ko00592,ko00642,ko01100,ko01110,ko01120,ko01130,ko01212,map00071,map00280,map00281,map00362,map00592,map00642,map01100,map01110,map01120,map01130,map01212	ko00000,ko00001,ko00002,ko01000	Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed
PCFPDMBM_01757	0.0	fadB	1.1.1.35, 4.2.1.17, 5.1.2.3, 5.3.3.8	-	I	ko:K01782,ko:K01825	ko00071,ko00280,ko00281,ko00310,ko00362,ko00380,ko00410,ko00640,ko00650,ko00903,ko00930,ko01040,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00071,map00280,map00281,map00310,map00362,map00380,map00410,map00640,map00650,map00903,map00930,map01040,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002,ko01000	Involved in the aerobic and anaerobic degradation of long-chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate
PCFPDMBM_01758	0.0	pepQ	3.4.13.9	-	E	ko:K01271	-	ko00000,ko01000,ko01002	Splits dipeptides with a prolyl residue in the C- terminal position
PCFPDMBM_01759	1.77e-137	yigZ	2.1.1.45	-	S	ko:K00560	ko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523	ko00000,ko00001,ko00002,ko01000	YigZ family
PCFPDMBM_01760	0.0	trkH	-	-	P	ko:K03498	-	ko00000,ko02000	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
PCFPDMBM_01761	1.23e-123	hemG	1.3.5.3	-	CH	ko:K00230	ko00860,ko01100,ko01110,map00860,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Protoporphyrinogen oxidase
PCFPDMBM_01762	1.99e-237	murB	1.3.1.98	-	M	ko:K00075	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	cell wall formation
PCFPDMBM_01763	3.06e-214	birA	6.3.4.15	-	H	ko:K03524	ko00780,ko01100,map00780,map01100	ko00000,ko00001,ko01000,ko03000	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
PCFPDMBM_01764	0.0	yhjK	-	-	T	-	-	-	the EAL-domain portion of HmsP from Y. pestis shows phosphodiesterase activity which is required for the inhibition of biofilm formation
PCFPDMBM_01765	2e-285	dctA	-	-	U	ko:K11103	ko02020,map02020	ko00000,ko00001,ko02000	Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
PCFPDMBM_01766	0.0	yhjJ	-	-	S	ko:K07263	-	ko00000,ko01000,ko01002	Peptidase, M16
PCFPDMBM_01767	1.03e-205	kdgK	2.7.1.45	-	G	ko:K00874	ko00030,ko01100,ko01120,ko01200,map00030,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	COG0524 Sugar kinases, ribokinase family
PCFPDMBM_01768	1.04e-173	yhjH	3.1.4.52	-	T	ko:K21086	ko02026,map02026	ko00000,ko00001,ko01000	In Escherichia coli this protein is involved in flagellar function
PCFPDMBM_01769	0.0	yhjG	-	-	M	ko:K07290	-	ko00000	protein involved in outer membrane biogenesis
PCFPDMBM_01770	1.7e-299	yhjE	-	-	EGP	-	-	-	Major facilitator superfamily
PCFPDMBM_01771	1.28e-231	yhjD	-	-	S	ko:K07058	-	ko00000	Membrane
PCFPDMBM_01772	6.19e-208	yhjC	-	-	K	-	-	-	transcriptional regulator
PCFPDMBM_01773	9.44e-159	-	-	-	IQ	-	-	-	short-chain dehydrogenase
PCFPDMBM_01774	7.16e-118	ydaF_2	2.3.1.128	-	J	ko:K03790	-	ko00000,ko01000,ko03009	Acetyltransferases, including N-acetylases of ribosomal proteins
PCFPDMBM_01775	0.0	-	-	-	-	-	-	-	-
PCFPDMBM_01776	0.0	treF	3.2.1.28	GH37	G	ko:K01194	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko00537,ko01000	Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system
PCFPDMBM_01778	6.08e-81	dsbA_1	-	-	O	ko:K03673	ko01503,map01503	ko00000,ko00001,ko00002,ko03110	DSBA-like thioredoxin domain
PCFPDMBM_01779	5.73e-121	-	-	-	M	-	-	-	(ABC) transporter
PCFPDMBM_01780	0.0	lagD	-	-	V	ko:K13409	ko02010,ko04626,map02010,map04626	ko00000,ko00001,ko00002,ko02000,ko02044	COG2274 ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
PCFPDMBM_01781	1.41e-153	macA	-	-	M	ko:K02005,ko:K13888	-	ko00000,ko00002,ko02000	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PCFPDMBM_01782	0.0	macB	-	-	V	ko:K02003,ko:K05685	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides
PCFPDMBM_01783	1.06e-193	cusC	-	-	M	ko:K18139	ko01501,ko02024,map01501,map02024	ko00000,ko00001,ko00002,ko01504,ko02000	Membrane
PCFPDMBM_01784	1.57e-243	fabF_1	2.3.1.179	-	IQ	ko:K09458	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Belongs to the beta-ketoacyl-ACP synthases family
PCFPDMBM_01785	5.21e-66	-	-	-	I	-	-	-	MaoC like domain
PCFPDMBM_01786	3.18e-32	-	-	-	IQ	ko:K02078	-	ko00000,ko00001	acyl carrier protein
PCFPDMBM_01787	3.04e-107	fabG_1	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	3-oxoacyl- acyl-carrier protein reductase
PCFPDMBM_01788	3.38e-14	-	-	-	-	-	-	-	-
PCFPDMBM_01789	8.39e-66	-	-	-	-	-	-	-	-
PCFPDMBM_01790	8.01e-93	-	-	-	L	-	-	-	Phage integrase family
PCFPDMBM_01793	1.16e-207	-	-	-	L	-	-	-	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
PCFPDMBM_01799	2.97e-54	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
PCFPDMBM_01800	2.74e-37	-	-	-	DJ	-	-	-	Addiction module toxin, RelE StbE family
PCFPDMBM_01809	9.31e-38	-	-	-	-	ko:K03503	-	ko00000,ko01000,ko01002,ko03400	-
PCFPDMBM_01810	9.28e-26	-	-	-	-	-	-	-	-
PCFPDMBM_01811	6.04e-58	higA	-	-	K	ko:K18831	-	ko00000,ko02048,ko03000	transcriptional regulator
PCFPDMBM_01812	1.71e-09	-	-	-	S	ko:K19166	-	ko00000,ko01000,ko02048	HigB_toxin, RelE-like toxic component of a toxin-antitoxin system
PCFPDMBM_01813	4.37e-57	-	-	-	L	ko:K07483	-	ko00000	Transposase and inactivated derivatives
PCFPDMBM_01816	1.41e-131	parA1	-	-	D	ko:K03496	-	ko00000,ko03036,ko04812	Cobyrinic acid a,c-diamide synthase
PCFPDMBM_01817	1.62e-27	-	-	-	S	-	-	-	ParG
PCFPDMBM_01818	9.08e-201	-	-	-	S	-	-	-	RePlication protein
PCFPDMBM_01819	6.93e-134	-	-	-	L	-	-	-	Phage integrase family protein
PCFPDMBM_01821	8.55e-64	-	-	-	L	-	-	-	IS1 transposase
PCFPDMBM_01822	3.08e-61	-	-	-	L	-	-	-	cog cog3677
PCFPDMBM_01828	9.6e-59	-	-	-	G	-	-	-	4-amino-4-deoxy-alpha-L-arabinopyranosyl undecaprenyl phosphate biosynthetic process
PCFPDMBM_01829	1.52e-237	ISPlu13C	-	-	L	ko:K07486	-	ko00000	Transposase
PCFPDMBM_01830	3.12e-142	-	-	-	E	-	-	-	LysE type translocator
PCFPDMBM_01831	8.91e-128	-	-	-	T	-	-	-	Winged helix-turn-helix DNA binding
PCFPDMBM_01832	3.79e-186	amiD	3.5.1.28	-	V	ko:K01447,ko:K11066	-	ko00000,ko01000,ko01011	N-acetylmuramoyl-L-alanine amidase
PCFPDMBM_01833	1.35e-67	ybjQ	-	-	S	-	-	-	Belongs to the UPF0145 family
PCFPDMBM_01834	6.4e-113	ybjP	-	-	M	-	-	-	Induced during stationary phase and by acivicin (a glutamine analog)
PCFPDMBM_01835	1.28e-167	artP	-	-	E	ko:K10000	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Arginine ABC transporter, ATP-binding protein
PCFPDMBM_01836	8.31e-169	artI	-	-	ET	ko:K09996,ko:K09997,ko:K10014	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	belongs to the bacterial solute-binding protein 3 family
PCFPDMBM_01837	3.93e-160	artQ	-	-	P	ko:K09999	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	arginine transporter permease subunit ArtQ
PCFPDMBM_01838	2.53e-139	artM	-	-	P	ko:K09998	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	(ABC) transporter
PCFPDMBM_01839	3.68e-172	artJ	-	-	ET	ko:K09996,ko:K09997,ko:K10014	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	belongs to the bacterial solute-binding protein 3 family
PCFPDMBM_01840	0.0	-	-	-	T	-	-	-	Histidine kinase
PCFPDMBM_01841	6.28e-153	walR	-	-	T	-	-	-	COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PCFPDMBM_01842	6.42e-262	rlmC	2.1.1.189	-	J	ko:K03212	-	ko00000,ko01000,ko03009	Catalyzes the formation of 5-methyl-uridine at position 747 (m5U747) in 23S rRNA
PCFPDMBM_01843	2.98e-104	ybjO	-	-	S	-	-	-	Membrane
PCFPDMBM_01844	2.37e-187	potI	-	-	P	ko:K11070,ko:K11074	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC-type spermidine putrescine transport system, permease component II
PCFPDMBM_01845	1.72e-218	potH	-	-	P	ko:K11075	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC-type spermidine putrescine transport system, permease component I
PCFPDMBM_01846	2.34e-265	potG	3.6.3.31	-	P	ko:K02052,ko:K11072,ko:K11076	ko02010,ko02024,map02010,map02024	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
PCFPDMBM_01847	8.19e-267	potF	-	-	P	ko:K11073	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Required for the activity of the bacterial periplasmic transport system of putrescine
PCFPDMBM_01848	3.13e-104	ybjN	-	-	S	-	-	-	sensory transduction regulator
PCFPDMBM_01849	1.51e-204	rimK	-	-	F	ko:K05844	-	ko00000,ko01000,ko03009	Belongs to the RimK family
PCFPDMBM_01850	1.19e-171	nfsA	1.5.1.38	-	C	ko:K10678,ko:K19285	ko00633,ko00740,ko01100,ko01120,map00633,map00740,map01100,map01120	ko00000,ko00001,ko01000	Nitroreductase
PCFPDMBM_01851	5e-57	grxA	-	-	O	ko:K03674	-	ko00000,ko03110	Glutaredoxin
PCFPDMBM_01852	9.74e-59	ybjM	-	-	S	-	-	-	Putative inner membrane protein of Enterobacteriaceae
PCFPDMBM_01853	0.0	ybjL	-	-	P	ko:K07085	-	ko00000	transport protein
PCFPDMBM_01854	1.14e-118	crtZ	1.14.15.24	-	I	ko:K15746	ko00906,ko01100,ko01110,map00906,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Fatty acid hydroxylase superfamily
PCFPDMBM_01855	2.11e-199	crtB	2.5.1.32, 2.5.1.99	-	I	ko:K02291	ko00906,ko01062,ko01100,ko01110,map00906,map01062,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01006	Phytoene squalene synthetase
PCFPDMBM_01856	0.0	crtI	1.3.99.26, 1.3.99.28, 1.3.99.29, 1.3.99.31	-	Q	ko:K10027	ko00906,ko01100,ko01110,map00906,map01100,map01110	ko00000,ko00001,ko01000	COG1233 Phytoene dehydrogenase and related proteins
PCFPDMBM_01857	3.5e-242	crtY	5.5.1.19	-	CH	ko:K06443	ko00906,ko01100,ko01110,map00906,map01100,map01110	ko00000,ko00001,ko00002,ko01000	lycopene cyclase
PCFPDMBM_01858	7.43e-217	fni	5.3.3.2	-	C	ko:K01823	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
PCFPDMBM_01859	1.89e-201	crtE	2.5.1.1, 2.5.1.10, 2.5.1.29	-	H	ko:K13789	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko01006	Belongs to the FPP GGPP synthase family
PCFPDMBM_01860	5.3e-108	-	-	-	S	ko:K09965	-	ko00000	Uncharacterized protein conserved in bacteria (DUF2239)
PCFPDMBM_01861	9.03e-122	ybjK	-	-	K	-	-	-	transcriptional regulator
PCFPDMBM_01862	1.1e-262	ybjJ	-	-	G	-	-	-	Major facilitator superfamily
PCFPDMBM_01863	1.17e-182	ybjI	3.1.3.102, 3.1.3.104, 3.1.3.23	-	C	ko:K07757,ko:K20861	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Hydrolase
PCFPDMBM_01864	3.16e-278	mdfA	-	-	EGP	ko:K08160	-	ko00000,ko01504,ko02000	multi-drug
PCFPDMBM_01865	1.91e-137	-	-	-	S	-	-	-	PAP2 superfamily
PCFPDMBM_01866	3.64e-135	ybjG	3.6.1.27	-	I	ko:K19302	ko00550,map00550	ko00000,ko00001,ko01000,ko01011	Phosphatase
PCFPDMBM_01867	1.97e-176	deoR	-	-	K	ko:K11534	-	ko00000,ko03000	transcriptional
PCFPDMBM_01868	1.52e-282	dacC	3.4.16.4	-	M	ko:K07258	ko00550,ko01100,map00550,map01100	ko00000,ko00001,ko01000,ko01002,ko01011	Belongs to the peptidase S11 family
PCFPDMBM_01869	5.26e-141	yliJ	2.5.1.18	-	O	ko:K00799	ko00480,ko00980,ko00982,ko00983,ko01524,ko05200,ko05204,ko05225,ko05418,map00480,map00980,map00982,map00983,map01524,map05200,map05204,map05225,map05418	ko00000,ko00001,ko01000,ko02000	Glutathione S-Transferase
PCFPDMBM_01870	2.82e-259	yliI	-	-	G	ko:K21430	-	ko00000,ko01000	glucose sorbosone
PCFPDMBM_01871	3.21e-236	mdoB	2.7.8.20	-	M	ko:K01002	ko01100,map01100	ko00000,ko01000	PFAM Sulfatase
PCFPDMBM_01872	1.24e-86	bssR	-	-	S	ko:K19688	-	ko00000,ko02048	disruption of this gene in Escherichia coli led to effects on biofilm formation, alteration in expression of a number of genes and mutations in bssS led to defects in indole transport and autoinducer-2 uptake and processing
PCFPDMBM_01873	0.0	rimO	2.8.4.4	-	J	ko:K14441	-	ko00000,ko01000,ko03009	Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12
PCFPDMBM_01874	4.35e-238	-	-	-	M	ko:K19510	-	ko00000	Glucosamine--fructose-6-phosphate aminotransferase
PCFPDMBM_01875	5.56e-229	-	-	-	M	ko:K19504	-	ko00000	glucosamine--fructose-6-phosphate aminotransferase
PCFPDMBM_01876	6.86e-194	-	-	-	G	ko:K19509	ko02060,map02060	ko00000,ko00001,ko00002,ko02000	PTS mannose transporter subunit IID
PCFPDMBM_01877	8.55e-156	agaC	-	-	G	ko:K02795,ko:K19508	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	PTS system
PCFPDMBM_01878	3.15e-103	-	2.7.1.191	-	G	ko:K02794,ko:K19507	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system sorbose subfamily IIB component
PCFPDMBM_01879	8.64e-82	-	-	-	G	ko:K19506	ko02060,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS sugar transporter
PCFPDMBM_01880	0.0	-	-	-	K	ko:K19505	-	ko00000,ko03000	transcriptional regulator
PCFPDMBM_01881	1.54e-60	-	-	-	-	-	-	-	-
PCFPDMBM_01883	5.58e-94	-	-	-	K	-	-	-	Acetyltransferase
PCFPDMBM_01884	1.54e-146	-	-	-	F	-	-	-	intracellular protease amidase
PCFPDMBM_01885	3.4e-174	ycnD	1.5.1.39	-	C	ko:K10678,ko:K19286	ko00633,ko00740,ko01100,ko01120,map00633,map00740,map01100,map01120	ko00000,ko00001,ko01000	nitroreductase
PCFPDMBM_01886	8.08e-206	gsiD	-	-	P	ko:K13891	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	transport
PCFPDMBM_01887	2.24e-209	gsiC	-	-	P	ko:K13890	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC-type dipeptide oligopeptide nickel transport systems, permease components
PCFPDMBM_01888	0.0	gsiB	-	-	E	ko:K13889	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Extracellular solute-binding protein, family 5
PCFPDMBM_01889	0.0	gsiA	-	-	P	ko:K02031,ko:K02032,ko:K13892,ko:K13896,ko:K19229,ko:K19230	ko01503,ko02010,ko02024,map01503,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
PCFPDMBM_01890	1.51e-210	iaaA	3.4.19.5, 3.5.1.1	-	E	ko:K01424,ko:K13051	ko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110	ko00000,ko00001,ko01000,ko01002	asparaginase
PCFPDMBM_01891	1.41e-285	moeA	2.10.1.1	-	H	ko:K03750	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko01000	molybdopterin
PCFPDMBM_01892	4.57e-165	moeB	2.7.7.73, 2.7.7.80	-	H	ko:K03148,ko:K21029	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000	COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2
PCFPDMBM_01893	4.39e-139	fsaA	-	-	H	ko:K08313,ko:K08314	-	ko00000,ko01000	Belongs to the transaldolase family. Type
PCFPDMBM_01894	3.48e-214	ybiY	1.97.1.4	-	O	ko:K04069	-	ko00000,ko01000	Pyruvate formate lyase-activating protein
PCFPDMBM_01895	0.0	ybiW	2.3.1.54	-	C	ko:K00656	ko00620,ko00640,ko00650,ko01100,ko01120,map00620,map00640,map00650,map01100,map01120	ko00000,ko00001,ko01000	Glycine radical enzyme that catalyzes the cleavage of a C-N bond in choline, producing trimethylamine (TMA) and acetaldehyde
PCFPDMBM_01896	9e-187	supH	3.1.3.102, 3.1.3.104, 3.1.3.23	-	C	ko:K07757,ko:K20861	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Hydrolase
PCFPDMBM_01897	6.93e-316	ybiU	-	-	S	-	-	-	Protein of unknown function (DUF1479)
PCFPDMBM_01898	0.0	ybiT	-	-	S	-	-	-	ABC transporter
PCFPDMBM_01899	4.99e-222	ybiS	-	-	M	ko:K16291,ko:K19234,ko:K19235,ko:K19236	ko01503,map01503	ko00000,ko00001,ko01002,ko01011	ErfK YbiS YcfS YnhG family protein
PCFPDMBM_01900	0.0	nodT	-	-	M	ko:K18139	ko01501,ko02024,map01501,map02024	ko00000,ko00001,ko00002,ko01504,ko02000	RND efflux system, outer membrane lipoprotein
PCFPDMBM_01901	0.0	emrb1	-	-	EGP	ko:K03446	-	ko00000,ko00002,ko02000	Major facilitator superfamily
PCFPDMBM_01902	3.81e-166	emra1	-	-	V	ko:K03543	-	ko00000,ko00002,ko02000	multidrug resistance
PCFPDMBM_01903	9.11e-243	ybiR	-	-	P	-	-	-	Citrate transporter
PCFPDMBM_01904	3.4e-103	mntR	-	-	K	ko:K11924	-	ko00000,ko03000	transcriptional regulator
PCFPDMBM_01905	1.66e-23	-	-	-	-	-	-	-	-
PCFPDMBM_01906	0.0	ybiP	-	-	S	ko:K19353	ko00540,map00540	ko00000,ko00001,ko01000,ko01005	membrane-associated metal-dependent hydrolase
PCFPDMBM_01907	1.34e-114	ompX	-	-	M	ko:K11934	-	ko00000,ko02000	mutations in the gene increase cell-surface contact in fimbriated strains but decrease contact in nonfimbriated strains
PCFPDMBM_01908	1.63e-185	rhtA	-	-	S	ko:K11939	-	ko00000,ko02000	EamA-like transporter family
PCFPDMBM_01909	4.38e-113	dps	-	-	P	ko:K04047	-	ko00000,ko03036	During stationary phase, binds the chromosome non- specifically, forming a highly ordered and stable dps-DNA co- crystal within which chromosomal DNA is condensed and protected from diverse damages. It protects DNA from oxidative damage by sequestering intracellular Fe(2 ) ion and storing it in the form of Fe(3 ) oxyhydroxide mineral, which can be released after reduction. One hydrogen peroxide oxidizes two Fe(2 ) ions, which prevents hydroxyl radical production by the Fenton reaction
PCFPDMBM_01910	2.57e-170	glnH	-	-	ET	ko:K02030,ko:K10036	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	belongs to the bacterial solute-binding protein 3 family
PCFPDMBM_01911	3.8e-144	glnP	-	-	P	ko:K10037	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	(ABC) transporter
PCFPDMBM_01912	2.21e-167	glnQ	3.6.3.21	-	E	ko:K02028,ko:K02029,ko:K09972,ko:K10004,ko:K10010,ko:K10038	ko02010,ko02020,map02010,map02020	ko00000,ko00001,ko00002,ko01000,ko02000	(ABC) transporter
PCFPDMBM_01913	0.0	ybiO	-	-	M	ko:K22044	-	ko00000,ko02000	mechanosensitive ion channel
PCFPDMBM_01914	1.04e-213	rlmF	2.1.1.181	-	J	ko:K06970	-	ko00000,ko01000,ko03009	Specifically methylates the adenine in position 1618 of 23S rRNA
PCFPDMBM_01915	1.21e-49	mcbA	-	-	S	ko:K13650	-	ko00000,ko02048	colanic acid metabolic process
PCFPDMBM_01916	0.0	fiu	-	-	P	ko:K16090	-	ko00000,ko02000	receptor
PCFPDMBM_01917	1.9e-156	ybiX	-	-	S	ko:K07336	-	ko00000,ko01000	PkhD-type hydroxylase
PCFPDMBM_01918	2.7e-56	ybiI	-	-	T	-	-	-	DnaK suppressor protein
PCFPDMBM_01919	3.22e-45	ybiJ	-	-	S	ko:K12151	-	ko00000,ko02048	protein involved in
PCFPDMBM_01920	2.73e-215	ybiB	-	-	E	-	-	-	Glycosyl transferase
PCFPDMBM_01921	2e-80	-	-	-	NU	ko:K07345	ko05133,map05133	ko00000,ko00001,ko02035,ko02044	Fimbrial protein
PCFPDMBM_01922	1.56e-111	-	-	-	M	-	-	-	PFAM pili assembly chaperone
PCFPDMBM_01923	0.0	-	-	-	NU	ko:K07347	ko05133,map05133	ko00000,ko00001,ko02000,ko02035,ko02044	COG3188 P pilus assembly protein, porin PapC
PCFPDMBM_01924	6.82e-104	-	-	-	NU	-	-	-	Fimbrial protein
PCFPDMBM_01925	1.03e-74	-	-	-	NU	ko:K07349	-	ko00000,ko02035,ko02044	Fimbrial protein
PCFPDMBM_01926	0.0	dinG	3.6.4.12	-	KL	ko:K03722	-	ko00000,ko01000,ko03400	helicase
PCFPDMBM_01927	7.16e-285	rhlE	3.6.4.13	-	JKL	ko:K11927	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	DEAD-box RNA helicase involved in
PCFPDMBM_01928	3.94e-149	ybiH	-	-	K	-	-	-	Transcriptional regulator
PCFPDMBM_01929	1.26e-184	ybhG	-	-	M	ko:K01993	-	ko00000	UPF0194 membrane protein YbhG
PCFPDMBM_01930	0.0	ybhF	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	(ABC) transporter
PCFPDMBM_01931	1.12e-247	ybhS	-	-	V	ko:K01992	-	ko00000,ko00002,ko02000	ABC-type multidrug transport system, permease component
PCFPDMBM_01932	6.06e-252	ybhR	-	-	V	ko:K01992	-	ko00000,ko00002,ko02000	Transport Permease Protein
PCFPDMBM_01933	2e-85	ybhQ	-	-	S	-	-	-	inner membrane protein YbhQ
PCFPDMBM_01934	7.18e-184	ybhP	-	-	L	-	-	-	Endonuclease Exonuclease Phosphatase
PCFPDMBM_01935	1.2e-299	clsB	-	-	I	ko:K06131	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Catalyzes the phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PCFPDMBM_01936	5.92e-212	ybhN	-	-	S	ko:K07027	-	ko00000,ko02000	Membrane
PCFPDMBM_01937	4.57e-153	ybhL	-	-	S	ko:K06890	-	ko00000	Belongs to the BI1 family
PCFPDMBM_01938	2.34e-102	moaE	2.8.1.12	-	H	ko:K03635	ko00790,ko01100,ko04122,map00790,map01100,map04122	ko00000,ko00001,ko01000	Molybdopterin converting factor, large subunit
PCFPDMBM_01939	1.26e-42	moaD	-	-	H	ko:K03636	ko04122,map04122	ko00000,ko00001	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
PCFPDMBM_01940	2.88e-106	moaC	4.6.1.17	-	H	ko:K03637	ko00790,ko01100,ko04122,map00790,map01100,map04122	ko00000,ko00001,ko01000	Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP)
PCFPDMBM_01941	1.25e-118	moaB	2.7.7.75	-	H	ko:K03638	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko01000	May be involved in the biosynthesis of molybdopterin
PCFPDMBM_01942	2.07e-237	moaA	4.1.99.22	-	H	ko:K03639	ko00790,ko01100,ko04122,map00790,map01100,map04122	ko00000,ko00001,ko01000	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
PCFPDMBM_01943	1.33e-199	ybhK	-	-	S	-	-	-	Required for morphogenesis under gluconeogenic growth conditions
PCFPDMBM_01944	0.0	uvrB	-	-	L	ko:K03702	ko03420,map03420	ko00000,ko00001,ko03400	damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
PCFPDMBM_01945	5.48e-147	urtE	-	-	E	ko:K11963	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter ATP-binding protein
PCFPDMBM_01946	4.55e-147	bioD	6.3.3.3	-	H	ko:K01935	ko00780,ko01100,map00780,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
PCFPDMBM_01947	3.12e-152	bioC	2.1.1.197	-	H	ko:K02169	ko00780,ko01100,map00780,map01100	ko00000,ko00001,ko00002,ko01000	Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl- L-methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway
PCFPDMBM_01948	2.69e-243	bioF	2.3.1.47	-	H	ko:K00652	ko00780,ko01100,map00780,map01100	ko00000,ko00001,ko00002,ko01000,ko01007	Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide
PCFPDMBM_01949	1.17e-247	bioB	2.8.1.6	-	H	ko:K01012	ko00780,ko01100,map00780,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
PCFPDMBM_01950	0.0	bioA	2.6.1.62	-	H	ko:K00833	ko00780,ko01100,map00780,map01100	ko00000,ko00001,ko00002,ko01000,ko01007	Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor
PCFPDMBM_01951	7.42e-112	ybhB	-	-	S	ko:K06910	-	ko00000	PFAM PEBP family protein
PCFPDMBM_01952	0.0	hutH	4.3.1.3	-	E	ko:K01745	ko00340,ko01100,map00340,map01100	ko00000,ko00001,ko00002,ko01000	histidine ammonia-lyase
PCFPDMBM_01953	0.0	hutU	4.2.1.49	-	E	ko:K01712	ko00340,ko01100,map00340,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
PCFPDMBM_01954	4.27e-167	hutC	-	-	K	ko:K05836	-	ko00000,ko03000	histidine utilization repressor
PCFPDMBM_01955	1.04e-201	hutG	3.5.3.11, 3.5.3.8	-	E	ko:K01479,ko:K01480	ko00330,ko00340,ko01100,map00330,map00340,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of N-formimidoyl-L-glutamate to L-glutamate and formamide
PCFPDMBM_01956	6.34e-276	hutI	3.5.2.7	-	Q	ko:K01468	ko00340,ko01100,map00340,map01100	ko00000,ko00001,ko00002,ko01000	'catalyzing the hydrolysis of 4-imidazolone-5-propionate to N-formimidoyl-L-glutamate, the third step in the histidine degradation pathway'
PCFPDMBM_01957	1.36e-303	ybhC	3.1.1.11	-	G	ko:K01051	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko00002,ko01000	Pectinesterase
PCFPDMBM_01959	1.59e-242	pgl	3.1.1.31	-	G	ko:K07404	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate
PCFPDMBM_01960	5.39e-184	ybhA	-	-	S	-	-	-	hydrolases of the HAD superfamily
PCFPDMBM_01961	3.37e-250	modC	3.6.3.29	-	P	ko:K02017	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
PCFPDMBM_01962	5.35e-149	modB	-	-	P	ko:K02018	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	PFAM binding-protein-dependent transport systems inner membrane component
PCFPDMBM_01963	5.02e-159	modA	-	-	P	ko:K02020	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	TIGRFAM molybdenum ABC transporter, periplasmic
PCFPDMBM_01964	1.14e-22	acrZ	-	-	U	-	-	-	AcrA-AcrB-AcrZ-TolC is a drug efflux protein complex with a broad substrate specificity. This protein binds to AcrB and is required for efflux of some but not all substrates, suggesting it may influence the specificity of drug export
PCFPDMBM_01965	2.94e-167	modE	-	-	H	ko:K02019	-	ko00000,ko03000	Transcriptional regulator
PCFPDMBM_01966	0.0	modF	3.6.3.34	-	P	ko:K02013,ko:K05776	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC-type molybdenum transport system ATPase component photorepair protein PhrA
PCFPDMBM_01967	6.54e-250	galE	5.1.3.2	-	M	ko:K01784	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000	udp-glucose 4-epimerase
PCFPDMBM_01968	1.06e-260	galT	2.7.7.12	-	H	ko:K00965	ko00052,ko00520,ko01100,ko04917,map00052,map00520,map01100,map04917	ko00000,ko00001,ko00002,ko01000	galactose-1-phosphate uridylyltransferase
PCFPDMBM_01969	1.47e-266	galK	2.7.1.6	-	G	ko:K00849	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
PCFPDMBM_01970	4.09e-248	galM	5.1.3.3	-	G	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	converts alpha-aldose to the beta-anomer
PCFPDMBM_01971	6.92e-185	gpmA	5.4.2.11	-	G	ko:K01834	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily
PCFPDMBM_01972	7.39e-253	aroG	2.5.1.54	-	E	ko:K01626	ko00400,ko01100,ko01110,ko01130,ko01230,ko02024,map00400,map01100,map01110,map01130,map01230,map02024	ko00000,ko00001,ko00002,ko01000	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
PCFPDMBM_01973	3.73e-48	ybgS	-	-	S	-	-	-	YbgS-like protein
PCFPDMBM_01974	1.52e-212	zitB	-	-	P	ko:K16264	-	ko00000,ko02000	cation diffusion facilitator family transporter
PCFPDMBM_01975	1.88e-163	pnuC	-	-	H	ko:K03811	-	ko00000,ko02000	nicotinamide mononucleotide transporter
PCFPDMBM_01976	8.91e-248	nadA	2.5.1.72	-	H	ko:K03517	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
PCFPDMBM_01982	3.97e-114	cpoB	-	-	D	-	-	-	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
PCFPDMBM_01983	3.94e-103	pal	-	-	M	ko:K03640	-	ko00000,ko02000	Belongs to the ompA family
PCFPDMBM_01984	5.76e-201	tolB	-	-	U	ko:K03641	-	ko00000,ko02000	involved in the tonB-independent uptake of proteins
PCFPDMBM_01985	8.19e-91	tolA	-	-	M	ko:K03646	-	ko00000,ko02000	TolA C-terminal
PCFPDMBM_01986	1.01e-90	tolR	-	-	U	ko:K03560	-	ko00000,ko02000	biopolymer transport protein
PCFPDMBM_01987	3.11e-153	tolQ	-	-	U	ko:K03562	ko01120,map01120	ko00000,ko02000	PFAM MotA TolQ ExbB proton channel
PCFPDMBM_01988	1.08e-88	ybgC	3.1.2.23	-	S	ko:K01075,ko:K07107	ko00130,ko00362,ko01100,ko01110,ko01120,map00130,map00362,map01100,map01110,map01120	ko00000,ko00001,ko01000	Acyl-CoA thioesterase
PCFPDMBM_01989	1.06e-58	ybgE	-	-	S	-	-	-	cyd operon protein YbgE
PCFPDMBM_01990	2.02e-18	ybgT	1.10.3.14	-	S	ko:K00424	ko00190,ko02020,map00190,map02020	ko00000,ko00001,ko01000	oxidoreductase activity, acting on diphenols and related substances as donors
PCFPDMBM_01991	4.54e-264	cydB	1.10.3.14	-	C	ko:K00426	ko00190,ko01100,ko02020,map00190,map01100,map02020	ko00000,ko00001,ko00002,ko01000	cytochrome d ubiquinol oxidase, subunit
PCFPDMBM_01992	0.0	cydA	1.10.3.14	-	C	ko:K00425	ko00190,ko01100,ko02020,map00190,map01100,map02020	ko00000,ko00001,ko00002,ko01000	oxidase, subunit
PCFPDMBM_01993	2.62e-204	sucD	6.2.1.5	-	C	ko:K01902	ko00020,ko00640,ko00660,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00640,map00660,map00720,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
PCFPDMBM_01994	2.79e-274	sucC	6.2.1.5	-	F	ko:K01903	ko00020,ko00640,ko00660,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00640,map00660,map00720,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit
PCFPDMBM_01995	1.03e-265	sucB	2.3.1.61	-	C	ko:K00658	ko00020,ko00310,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00310,map01100,map01110,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000	The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2)
PCFPDMBM_01996	0.0	sucA	1.2.4.2	-	C	ko:K00164	ko00020,ko00310,ko00380,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00310,map00380,map01100,map01110,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000	Dehydrogenase E1 component
PCFPDMBM_01997	1.63e-177	sdhB	1.3.5.1, 1.3.5.4	-	C	ko:K00240	ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
PCFPDMBM_01998	0.0	sdhA	1.3.5.1, 1.3.5.4	-	C	ko:K00239	ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko05134,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map05134	ko00000,ko00001,ko00002,ko01000	Belongs to the FAD-dependent oxidoreductase 2 family. FRD SDH subfamily
PCFPDMBM_01999	1.45e-59	sdhD	-	-	C	ko:K00242	ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002	Membrane-anchoring subunit of succinate dehydrogenase (SDH)
PCFPDMBM_02000	2.28e-108	sdhC	-	-	C	ko:K00241	ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002	succinate dehydrogenase
PCFPDMBM_02001	9.71e-317	gltA	2.3.3.1	-	C	ko:K01647	ko00020,ko00630,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map01100,map01110,map01120,map01130,map01200,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Belongs to the citrate synthase family
PCFPDMBM_02002	1.37e-177	nei	4.2.99.18	-	L	ko:K05522	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized pyrimidines, such as thymine glycol, 5,6-dihydrouracil and 5,6-dihydrothymine. Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'- phosphates
PCFPDMBM_02003	1.44e-141	pcp	3.4.19.3	-	O	ko:K01304	-	ko00000,ko01000,ko01002	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
PCFPDMBM_02004	3.24e-226	-	-	-	S	-	-	-	Membrane
PCFPDMBM_02005	9.67e-160	-	-	-	S	-	-	-	Membrane
PCFPDMBM_02006	6.28e-165	ybgL	-	-	E	ko:K07160	-	ko00000	Belongs to the UPF0271 (lamB) family
PCFPDMBM_02007	4.6e-220	ybgK	3.5.1.54, 6.3.4.6	-	E	ko:K01457,ko:K01941	ko00220,ko00791,ko01100,ko01120,map00220,map00791,map01100,map01120	ko00000,ko00001,ko01000	Allophanate hydrolase subunit 2
PCFPDMBM_02008	6.34e-147	ybgJ	-	-	E	-	-	-	Allophanate hydrolase subunit 1
PCFPDMBM_02009	4.47e-175	ybgI	-	-	S	-	-	-	metal-binding protein
PCFPDMBM_02010	0.0	phrB	4.1.99.3	-	L	ko:K01669	-	ko00000,ko01000,ko03400	Belongs to the DNA photolyase family
PCFPDMBM_02011	1.09e-42	ybfA	-	-	S	-	-	-	Membrane
PCFPDMBM_02012	0.0	kdpA	3.6.3.12	-	P	ko:K01546	ko02020,map02020	ko00000,ko00001,ko01000	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
PCFPDMBM_02013	0.0	kdpB	3.6.3.12	-	P	ko:K01547	ko02020,map02020	ko00000,ko00001,ko01000	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
PCFPDMBM_02014	8.02e-114	kdpC	3.6.3.12	-	P	ko:K01548	ko02020,map02020	ko00000,ko00001,ko01000	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
PCFPDMBM_02015	0.0	kdpD	2.7.13.3	-	T	ko:K07646	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
PCFPDMBM_02016	3.14e-155	kdpE	-	-	K	ko:K07667	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko02022	response regulator
PCFPDMBM_02017	0.0	pgm	5.4.2.2	-	G	ko:K01835	ko00010,ko00030,ko00052,ko00230,ko00500,ko00520,ko00521,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00052,map00230,map00500,map00520,map00521,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Phosphoglucomutase
PCFPDMBM_02018	8.96e-117	seqA	-	-	L	ko:K03645	-	ko00000,ko03032,ko03036	Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated
PCFPDMBM_02019	5.21e-179	ybfF	-	-	S	ko:K01175	-	ko00000,ko01000	Alpha beta hydrolase
PCFPDMBM_02020	9.38e-58	ybfE	-	-	S	-	-	-	CopG domain protein DNA-binding domain protein
PCFPDMBM_02021	9.28e-128	fldA	-	-	C	ko:K03839	-	ko00000	Low-potential electron donor to a number of redox enzymes
PCFPDMBM_02022	1.08e-106	fur	-	-	K	ko:K03711	-	ko00000,ko03000	Belongs to the Fur family
PCFPDMBM_02023	1.09e-63	ybfN	-	-	S	-	-	-	YbfN-like lipoprotein
PCFPDMBM_02024	0.0	chiP	-	-	S	-	-	-	Outer membrane porin
PCFPDMBM_02025	0.0	glnS	6.1.1.18	-	J	ko:K01886	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
PCFPDMBM_02026	0.0	nagE	2.7.1.193	-	G	ko:K02802,ko:K02803,ko:K02804	ko00520,ko02060,map00520,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphotransferase System
PCFPDMBM_02027	8.08e-192	nagB	3.5.99.6	-	G	ko:K02564	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
PCFPDMBM_02028	1.05e-275	nagA	3.5.1.25	-	G	ko:K01443	ko00520,ko01130,map00520,map01130	ko00000,ko00001,ko01000	Belongs to the metallo-dependent hydrolases superfamily. NagA family
PCFPDMBM_02029	1.03e-285	nagC	2.7.1.2	-	K	ko:K00845,ko:K02565	ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000,ko03000	Regulates the synthesis of glucosamine and N-acetylglucosamine by acting as a repressor of the nagEBACD operon and both a repressor and activator of the glmSU operon
PCFPDMBM_02030	8.35e-177	nagD	3.1.3.41	-	G	ko:K01101,ko:K02566	ko00627,ko01120,map00627,map01120	ko00000,ko00001,ko01000	HAD-superfamily hydrolase, subfamily IIA
PCFPDMBM_02031	0.0	asnB	6.3.5.4	-	E	ko:K01953	ko00250,ko01100,ko01110,map00250,map01100,map01110	ko00000,ko00001,ko01000,ko01002	Asparagine synthase, glutamine-hydrolyzing
PCFPDMBM_02039	5.72e-264	ubiF	-	-	CH	ko:K03184	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	ubiquinone biosynthesis hydroxylase, UbiH UbiF VisC COQ6
PCFPDMBM_02040	0.0	miaB	2.8.4.3	-	J	ko:K06168	-	ko00000,ko01000,ko03016	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
PCFPDMBM_02041	5.12e-243	ybeZ	-	-	T	ko:K06217	-	ko00000	phosphate starvation-inducible protein PhoH
PCFPDMBM_02042	1.83e-106	ybeY	-	-	J	ko:K07042	-	ko00000,ko03009	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
PCFPDMBM_02043	1.64e-204	corC	-	-	P	ko:K06189	-	ko00000,ko02000	Mg2 and Co2 transporter CorC
PCFPDMBM_02044	0.0	lnt	-	GT2	M	ko:K03820	-	ko00000,ko01000	Transfers the fatty acyl group on membrane lipoproteins
PCFPDMBM_02045	2.65e-215	gltI	-	-	ET	ko:K10001	ko02010,ko02020,map02010,map02020	ko00000,ko00001,ko00002,ko02000	ABC-type amino acid transport signal transduction systems periplasmic component domain
PCFPDMBM_02046	2.3e-172	gltJ	-	-	P	ko:K02029,ko:K10003	ko02010,ko02020,map02010,map02020	ko00000,ko00001,ko00002,ko02000	amino acid ABC transporter
PCFPDMBM_02047	5.56e-144	gltK	-	-	P	ko:K10002	ko02010,ko02020,map02010,map02020	ko00000,ko00001,ko00002,ko02000	With GltJLPS and GadC for glutamate and GltJLP, DctA and DcuAB for aspartate is involved in the transport of glutamate and aspartate
PCFPDMBM_02048	8.56e-161	gltL	3.6.3.21	-	P	ko:K02028,ko:K02029,ko:K10004	ko02010,ko02020,map02010,map02020	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex GltIJKL involved in glutamate and aspartate uptake. Probably responsible for energy coupling to the transport system
PCFPDMBM_02049	3.42e-209	rihA	3.2.2.1	-	G	ko:K01239,ko:K01250	ko00230,ko00760,ko01100,map00230,map00760,map01100	ko00000,ko00001,ko01000	Belongs to the IUNH family
PCFPDMBM_02050	2.03e-106	ybeL	-	-	J	-	-	-	Zinc-ribbon containing domain
PCFPDMBM_02051	0.0	leuS	6.1.1.4	-	J	ko:K01869	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Belongs to the class-I aminoacyl-tRNA synthetase family
PCFPDMBM_02052	2.16e-123	lptE	-	-	M	ko:K03643	-	ko00000,ko02000	Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane
PCFPDMBM_02053	2.4e-234	holA	2.7.7.7	-	L	ko:K02340	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	dna polymerase III delta subunit
PCFPDMBM_02054	3.26e-144	nadD	2.7.7.18, 3.5.4.4	-	H	ko:K00969,ko:K01488	ko00230,ko00760,ko01100,ko05340,map00230,map00760,map01100,map05340	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
PCFPDMBM_02055	4.93e-69	rsfS	-	-	J	ko:K09710	-	ko00000,ko03009	Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
PCFPDMBM_02056	2.64e-103	rlmH	2.1.1.177	-	J	ko:K00783	-	ko00000,ko01000,ko03009	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
PCFPDMBM_02057	0.0	mrdA	3.4.16.4	-	M	ko:K05515	ko00550,ko01501,map00550,map01501	ko00000,ko00001,ko01000,ko01011	Catalyzes cross-linking of the peptidoglycan cell wall
PCFPDMBM_02058	4.99e-252	mrdB	-	-	M	ko:K05837	-	ko00000,ko03036	Peptidoglycan polymerase that is essential for cell wall elongation
PCFPDMBM_02059	3.54e-233	rlpA	-	-	M	ko:K03642	-	ko00000	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
PCFPDMBM_02060	6.55e-292	dacA	3.4.16.4	-	M	ko:K07258	ko00550,ko01100,map00550,map01100	ko00000,ko00001,ko01000,ko01002,ko01011	Belongs to the peptidase S11 family
PCFPDMBM_02061	5.07e-56	ybeD	-	-	S	ko:K09158	-	ko00000	Protein of unknown function (DUF493)
PCFPDMBM_02062	1.11e-149	lipB	2.3.1.181	-	H	ko:K03801	ko00785,ko01100,map00785,map01100	ko00000,ko00001,ko01000	Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate
PCFPDMBM_02063	2.32e-196	ybeF	-	-	K	-	-	-	transcriptional regulator
PCFPDMBM_02064	9.12e-237	lipA	2.8.1.8	-	H	ko:K03644	ko00785,ko01100,map00785,map01100	ko00000,ko00001,ko01000	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
PCFPDMBM_02065	6.77e-34	tatE	-	-	U	ko:K03425	ko03060,ko03070,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatE shares overlapping functions with TatA
PCFPDMBM_02066	3.58e-168	ybeM	-	-	S	ko:K11206	-	ko00000,ko01000	Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase
PCFPDMBM_02067	1.39e-83	crcB	-	-	D	ko:K06199	-	ko00000,ko02000	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PCFPDMBM_02068	4.31e-44	cspE	-	-	K	ko:K03704	-	ko00000,ko03000	SMART Cold shock protein
PCFPDMBM_02069	9.17e-61	pagP	2.3.1.251	-	M	ko:K12973	ko01503,ko05133,map01503,map05133	ko00000,ko00001,ko00002,ko01000,ko01005	Transfers a palmitate residue from the sn-1 position of a phospholipid to the N-linked hydroxymyristate on the proximal unit of lipid A or its precursors
PCFPDMBM_02070	2.04e-295	dcuC	-	-	C	ko:K03326	-	ko00000,ko02000	C4-dicarboxylate
PCFPDMBM_02071	8.04e-189	rna	3.1.27.1, 3.1.27.6	-	J	ko:K01166,ko:K01169	-	ko00000,ko01000,ko03016	Belongs to the RNase T2 family
PCFPDMBM_02072	4.9e-145	IV02_24660	-	-	S	-	-	-	Conserved protein domain typically associated with flavoprotein oxygenases DIM6 NTAB family
PCFPDMBM_02073	2.53e-88	rnk	-	-	K	ko:K06140	-	ko00000,ko03000	regulator of nucleoside diphosphate kinase
PCFPDMBM_02074	7.46e-298	ybdR	-	-	E	-	-	-	COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases
PCFPDMBM_02075	2.29e-87	uspG	-	-	T	ko:K11932	-	ko00000	Belongs to the universal stress protein A family
PCFPDMBM_02076	0.0	ahpF	-	-	O	ko:K03387	-	ko00000,ko01000	alkyl hydroperoxide reductase
PCFPDMBM_02077	8.96e-134	ahpC	1.11.1.15	-	O	ko:K03386	ko04214,map04214	ko00000,ko00001,ko01000,ko04147	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
PCFPDMBM_02078	0.0005	dsbG	-	-	O	ko:K03805	-	ko00000,ko03110	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
PCFPDMBM_02079	2.57e-146	ybdO	-	-	K	-	-	-	LysR substrate binding domain
PCFPDMBM_02080	4.61e-272	ybdL	2.6.1.88	-	E	ko:K14287	-	ko00000,ko01000,ko01007	aminotransferase
PCFPDMBM_02081	1.35e-141	mtnB	4.1.1.104, 4.2.1.109	-	E	ko:K08964,ko:K22130	ko00270,ko01100,map00270,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the dehydration of methylthioribulose-1- phosphate (MTRu-1-P) into 2,3-diketo-5-methylthiopentyl-1- phosphate (DK-MTP-1-P)
PCFPDMBM_02082	7.08e-154	mtnC	3.1.3.77	-	E	ko:K09880	ko00270,ko01100,map00270,map01100	ko00000,ko00001,ko00002,ko01000	Bifunctional enzyme that catalyzes the enolization of 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P) into the intermediate 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate (HK-MTPenyl-1-P), which is then dephosphorylated to form the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK- MTPene)
PCFPDMBM_02083	4.66e-128	mtnD	1.13.11.53, 1.13.11.54	-	S	ko:K08967	ko00270,ko01100,map00270,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway
PCFPDMBM_02084	4.69e-220	mtnA	5.3.1.23	-	E	ko:K08963	ko00270,ko01100,map00270,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
PCFPDMBM_02085	1.98e-279	mtnK	2.7.1.100	-	F	ko:K00899	ko00270,ko01100,map00270,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate
PCFPDMBM_02086	6.26e-311	-	-	-	S	-	-	-	LVIVD repeat
PCFPDMBM_02087	1.79e-246	-	-	-	G	ko:K02058	-	ko00000,ko00002,ko02000	Sugar ABC Transporter
PCFPDMBM_02088	6.85e-212	rbsC_3	-	-	G	ko:K02057	-	ko00000,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
PCFPDMBM_02089	0.0	mglA_3	3.6.3.17	-	G	ko:K02056	-	ko00000,ko00002,ko01000,ko02000	(ABC) transporter
PCFPDMBM_02090	3.17e-241	ybdH	-	-	C	ko:K08317	-	ko00000,ko01000	Iron-containing alcohol dehydrogenase
PCFPDMBM_02091	1.39e-153	-	-	-	IQ	-	-	-	KR domain
PCFPDMBM_02092	5.41e-43	-	-	-	DJ	-	-	-	ParE toxin of type II toxin-antitoxin system, parDE
PCFPDMBM_02093	2.53e-78	-	-	-	K	-	-	-	transcriptional regulator
PCFPDMBM_02094	2.45e-44	ybdD	-	-	S	-	-	-	Pfam:DUF466
PCFPDMBM_02095	0.0	cstA	-	-	T	ko:K06200	-	ko00000	Carbon starvation protein
PCFPDMBM_02096	4.07e-31	-	-	-	J	-	-	-	SmpA / OmlA family
PCFPDMBM_02097	2.79e-77	-	-	-	-	-	-	-	-
PCFPDMBM_02098	5.95e-92	entH	3.1.2.28	-	Q	ko:K19222	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Required for optimal enterobactin synthesis. Acts as a proofreading enzyme that prevents EntB misacylation by hydrolyzing the thioester bound existing between EntB and wrongly charged molecules
PCFPDMBM_02099	3.67e-155	entA	1.3.1.28	-	IQ	ko:K00216	ko01053,ko01110,ko01130,map01053,map01110,map01130	ko00000,ko00001,ko01000	involved in the biosynthesis of siderophores, enterobactin, bacillibactin or vibriobactin
PCFPDMBM_02100	1.12e-207	entB	3.3.2.1, 6.3.2.14	-	Q	ko:K01252	ko01053,ko01110,ko01130,map01053,map01110,map01130	ko00000,ko00001,ko01000,ko01008	Isochorismatase
PCFPDMBM_02101	0.0	entE	2.7.7.58, 6.3.2.14	-	Q	ko:K02363,ko:K12238	ko01053,ko01110,ko01130,map01053,map01110,map01130	ko00000,ko00001,ko01000,ko01008	2,3-dihydroxybenzoate-AMP ligase
PCFPDMBM_02102	1.91e-262	entC	5.4.4.2	-	HQ	ko:K01851,ko:K02361	ko00130,ko01053,ko01100,ko01110,ko01130,map00130,map01053,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Isochorismate synthase
PCFPDMBM_02103	9.28e-204	fepB	-	-	P	ko:K02016	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Periplasmic binding protein
PCFPDMBM_02104	4.67e-264	entS	-	-	EGP	ko:K08225	-	ko00000,ko02000	Exports the siderophore enterobactin out of the cell
PCFPDMBM_02105	3.91e-208	fepD	-	-	P	ko:K02015	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PCFPDMBM_02106	1.75e-211	fepG	-	-	P	ko:K02015	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PCFPDMBM_02107	4.77e-179	fepC	3.6.3.34	-	HP	ko:K02013	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	(ABC) transporter
PCFPDMBM_02108	1.2e-246	-	-	-	-	-	-	-	-
PCFPDMBM_02110	0.0	entF	6.3.2.14	-	Q	ko:K02364	ko01053,ko01110,ko01130,map01053,map01110,map01130	ko00000,ko00001,ko01000,ko01008	COG1020 Non-ribosomal peptide synthetase modules and related proteins
PCFPDMBM_02111	2.45e-44	ybdZ	-	-	P	ko:K05375,ko:K07214	ko00261,ko01130,map00261,map01130	ko00000,ko00001,ko00002	PFAM MbtH domain protein
PCFPDMBM_02112	1.23e-274	fes	-	-	P	ko:K07214	-	ko00000	esterase
PCFPDMBM_02113	0.0	fepA	-	-	P	ko:K16089,ko:K19611	ko02020,map02020	ko00000,ko00001,ko02000	Receptor
PCFPDMBM_02115	0.0	fdsA	1.17.1.9, 1.17.99.7	-	C	ko:K00123,ko:K22015	ko00630,ko00680,ko01100,ko01120,ko01200,map00630,map00680,map01100,map01120,map01200	ko00000,ko00001,ko01000	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
PCFPDMBM_02116	1.21e-88	fdsA	1.17.1.9, 1.17.99.7	-	C	ko:K00123,ko:K22015	ko00630,ko00680,ko01100,ko01120,ko01200,map00630,map00680,map01100,map01120,map01200	ko00000,ko00001,ko01000	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
PCFPDMBM_02117	2.5e-234	hoxN	-	-	U	ko:K07241	-	ko00000,ko02000	Belongs to the NiCoT transporter (TC 2.A.52) family
PCFPDMBM_02118	0.0	hypF	-	-	O	ko:K04656	-	ko00000	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
PCFPDMBM_02119	0.0	fdsA	1.17.1.9, 1.17.99.7	-	C	ko:K00123,ko:K22015	ko00630,ko00680,ko01100,ko01120,ko01200,map00630,map00680,map01100,map01120,map01200	ko00000,ko00001,ko01000	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
PCFPDMBM_02120	5.23e-130	hydN	-	-	C	ko:K00196,ko:K05796	ko00633,ko00680,ko00720,ko01120,ko01200,map00633,map00680,map00720,map01120,map01200	ko00000,ko00001	electron transport
PCFPDMBM_02121	1.09e-109	-	-	-	S	ko:K11903	ko02025,ko03070,map02025,map03070	ko00000,ko00001,ko00002,ko02044	Type VI secretion system effector
PCFPDMBM_02122	1.63e-97	-	-	-	S	-	-	-	Protein involved in biological_process
PCFPDMBM_02123	0.0	-	-	-	T	-	-	-	Tyrosine phosphatase family
PCFPDMBM_02124	2.58e-70	-	-	-	-	-	-	-	-
PCFPDMBM_02126	2.57e-154	-	-	-	S	-	-	-	Dienelactone hydrolase
PCFPDMBM_02127	2.94e-130	-	-	-	K	-	-	-	transcriptional regulator
PCFPDMBM_02128	5.34e-89	-	-	-	E	-	-	-	LysE type translocator
PCFPDMBM_02129	1.02e-64	-	-	-	M	-	-	-	TolA C-terminal
PCFPDMBM_02130	2.09e-47	-	-	-	S	-	-	-	Protein of unknown function (DUF1493)
PCFPDMBM_02131	4.09e-101	-	-	-	S	ko:K11903	ko02025,ko03070,map02025,map03070	ko00000,ko00001,ko00002,ko02044	Type VI secretion system effector
PCFPDMBM_02132	1.11e-105	hycI	3.4.23.51	-	C	ko:K08315	-	ko00000,ko01000,ko01002	hydrogenase 3 maturation protease
PCFPDMBM_02133	3.59e-88	hycH	-	-	E	ko:K12145,ko:K15834	-	ko00000,ko01000	Formate hydrogen-lyase
PCFPDMBM_02134	2.64e-166	hycG	-	-	C	ko:K14088,ko:K15832	-	ko00000	NADH ubiquinone oxidoreductase, 20
PCFPDMBM_02135	2.55e-112	hycF	-	-	C	ko:K12143,ko:K15831	-	ko00000	the formate hydrogenlyase complex comprises of a formate dehydrogenase, unidentified electron carriers and hydrogenase-3
PCFPDMBM_02136	0.0	hycE	-	-	C	ko:K12142,ko:K14090,ko:K15830	-	ko00000,ko01000	HycBCDEFG is part of the formate hydrogenlyase system which is involved in the cleaving of formate to dihydrogen and carbon dioxide
PCFPDMBM_02137	2.96e-194	hycD	-	-	C	ko:K15829	-	ko00000	HycBCDEFG is part of the formate hydrogenlyase system which is involved in the cleaving of formate to dihydrogen and carbon dioxide
PCFPDMBM_02138	0.0	hycC	-	-	CP	ko:K05568,ko:K12137,ko:K15828	-	ko00000,ko01000,ko02000	formate hydrogenlyase subunit 3
PCFPDMBM_02139	2.43e-138	hycB	-	-	C	ko:K15827	-	ko00000	Formate hydrogenlyase
PCFPDMBM_02140	3.56e-88	hycA	-	-	E	ko:K15833	-	ko00000	seems to prevent binding of FhlA transcriptional activator to the activator sequence of hyc operon
PCFPDMBM_02141	2.15e-75	hypA	-	-	S	ko:K04651	-	ko00000,ko03110	Probably plays a role in a hydrogenase nickel cofactor insertion step
PCFPDMBM_02142	2.15e-183	hypB	-	-	KO	ko:K04652	-	ko00000,ko03110	Hydrogenase accessory protein HypB
PCFPDMBM_02143	1.72e-54	hypC	-	-	O	ko:K04653	-	ko00000	Hydrogenase assembly chaperone hypC hupF
PCFPDMBM_02144	1.14e-254	hypD	-	-	O	ko:K04654	-	ko00000	Belongs to the HypD family
PCFPDMBM_02145	1.1e-215	hypE	-	-	O	ko:K04655	-	ko00000	hydrogenase expression formation protein HypE
PCFPDMBM_02146	0.0	fhlA	-	-	KT	ko:K15836	-	ko00000,ko03000	transcriptional regulator
PCFPDMBM_02147	2.79e-123	entD	6.3.2.14	-	Q	ko:K02362	ko01053,ko01110,ko01130,map01053,map01110,map01130	ko00000,ko00001,ko01000	Belongs to the P-Pant transferase superfamily
PCFPDMBM_02148	4.57e-217	rbsB_1	-	-	G	ko:K17202	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Periplasmic binding protein LacI transcriptional regulator
PCFPDMBM_02149	1.9e-131	-	-	-	S	-	-	-	Lipoprotein
PCFPDMBM_02150	0.0	rbsA_1	3.6.3.17	-	P	ko:K02056,ko:K10441,ko:K10542,ko:K10545,ko:K10562,ko:K17204	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	import. Responsible for energy coupling to the transport system
PCFPDMBM_02151	6.31e-235	-	-	-	G	ko:K17203	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
PCFPDMBM_02152	1.2e-214	deoR_1	-	-	K	-	-	-	transcriptional regulator
PCFPDMBM_02153	2.54e-81	-	-	-	S	ko:K11903	ko02025,ko03070,map02025,map03070	ko00000,ko00001,ko00002,ko02044	Type VI secretion system effector, Hcp
PCFPDMBM_02155	4.28e-74	-	-	-	-	-	-	-	-
PCFPDMBM_02156	4.88e-198	tktB	2.2.1.1	-	G	ko:K00615	ko00030,ko00710,ko01051,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01051,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Transketolase
PCFPDMBM_02157	9.55e-216	-	2.2.1.1	-	G	ko:K00615	ko00030,ko00710,ko01051,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01051,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Transketolase
PCFPDMBM_02158	0.0	-	-	-	G	-	-	-	L-fucose isomerase
PCFPDMBM_02159	0.0	glpK_1	2.7.1.30	-	G	ko:K00864	ko00561,ko01100,ko03320,ko04626,map00561,map01100,map03320,map04626	ko00000,ko00001,ko01000,ko04147	Belongs to the FGGY kinase family
PCFPDMBM_02160	3.47e-116	cas6f	-	-	S	ko:K19130	-	ko00000,ko01000,ko02048	crispr-associated protein, csy4
PCFPDMBM_02161	3.95e-227	csy3	-	-	S	ko:K19129	-	ko00000,ko02048	crispr-associated protein
PCFPDMBM_02162	4.05e-213	csy2	-	-	S	ko:K19128	-	ko00000,ko02048	crispr-associated protein
PCFPDMBM_02163	2.68e-267	csy1	-	-	S	ko:K19127	-	ko00000,ko02048	crispr-associated protein
PCFPDMBM_02164	0.0	cas3	-	-	L	ko:K07012	-	ko00000,ko01000,ko02048	CRISPR-associated helicase, Cas3
PCFPDMBM_02165	1.41e-216	cas1	-	-	L	ko:K15342	-	ko00000,ko02048,ko03400	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
PCFPDMBM_02166	7.07e-22	hokE	-	-	S	ko:K18922	-	ko00000,ko02048	Hok/gef family
PCFPDMBM_02167	1.99e-16	-	-	-	-	-	-	-	-
PCFPDMBM_02169	7.67e-162	rimL	-	-	J	-	-	-	Acetyltransferases including N-acetylases of ribosomal proteins
PCFPDMBM_02170	9.32e-103	capB	-	-	K	-	-	-	Cold-Shock Protein
PCFPDMBM_02171	3.89e-46	ymjA	-	-	S	-	-	-	Protein of unknown function (DUF2543)
PCFPDMBM_02172	3.18e-261	ybdK	-	-	H	ko:K06048	-	ko00000,ko01000	ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity
PCFPDMBM_02173	0.0	ctpF	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	ATPase, P-type (transporting), HAD superfamily, subfamily IC
PCFPDMBM_02174	2.36e-13	-	-	-	-	-	-	-	-
PCFPDMBM_02175	3.3e-38	ybdJ	-	-	S	-	-	-	Protein of unknown function (DUF1158)
PCFPDMBM_02176	8.53e-76	ramA	-	-	K	ko:K18325	-	ko00000,ko00002,ko03000	Transcriptional regulator
PCFPDMBM_02177	1.12e-267	-	-	-	S	-	-	-	Zn-dependent hydrolases of the beta-lactamase fold
PCFPDMBM_02178	1.03e-132	-	-	-	K	-	-	-	transcriptional regulator
PCFPDMBM_02179	1.53e-85	ybdF	-	-	S	-	-	-	YjbR
PCFPDMBM_02180	5.46e-152	nfnB	1.5.1.34	-	C	ko:K10679	ko00633,ko01120,map00633,map01120	ko00000,ko00001,ko01000	Nitroreductase
PCFPDMBM_02181	3.03e-54	-	-	-	K	-	-	-	sequence-specific DNA binding
PCFPDMBM_02182	2.92e-63	-	-	-	S	-	-	-	Phage-related protein
PCFPDMBM_02183	4.73e-209	-	-	-	K	-	-	-	transcriptional
PCFPDMBM_02184	0.0	-	-	-	EGP	-	-	-	Major facilitator superfamily
PCFPDMBM_02185	9.17e-284	ybdG	-	-	M	ko:K16053	-	ko00000,ko02000	Mechanosensitive Ion channel
PCFPDMBM_02186	3.69e-213	-	-	-	K	-	-	-	Periplasmic binding protein LacI transcriptional regulator
PCFPDMBM_02187	4.58e-269	-	-	-	S	-	-	-	oxidoreductase
PCFPDMBM_02188	6.51e-247	-	-	-	G	-	-	-	AP endonuclease
PCFPDMBM_02189	7.35e-273	yegT	-	-	G	-	-	-	Nucleoside H+ symporter
PCFPDMBM_02190	2.46e-67	VY92_07350	-	-	S	-	-	-	protein conserved in bacteria
PCFPDMBM_02191	2.53e-57	VY92_07345	-	-	K	-	-	-	transcriptional regulator
PCFPDMBM_02192	2.61e-314	pheP	-	-	E	ko:K03293,ko:K11732,ko:K11734	-	ko00000,ko02000	amino acid
PCFPDMBM_02193	0.0	-	-	-	S	ko:K07093	-	ko00000	Phosphatase
PCFPDMBM_02194	0.0	fcuA	-	-	P	ko:K02014	-	ko00000,ko02000	receptor
PCFPDMBM_02195	1.62e-236	-	-	-	S	-	-	-	amine dehydrogenase activity
PCFPDMBM_02196	1.32e-114	-	-	-	-	-	-	-	-
PCFPDMBM_02197	5.47e-84	yajD	-	-	L	-	-	-	HNH endonuclease
PCFPDMBM_02199	1.06e-198	folD	1.5.1.5, 3.5.4.9	-	F	ko:K01491	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
PCFPDMBM_02200	3.36e-42	ybcJ	-	-	S	ko:K14761	-	ko00000,ko03009	S4 domain
PCFPDMBM_02201	0.0	-	2.7.1.199	-	G	ko:K20117,ko:K20118	ko00010,ko00520,ko02060,map00010,map00520,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system
PCFPDMBM_02202	9.65e-227	-	-	-	K	ko:K16136	-	ko00000,ko03000	Protein involved in sequence-specific DNA binding transcription factor activity, DNA binding and regulation of transcription, DNA-templated
PCFPDMBM_02203	6.38e-123	ybcI	-	-	S	ko:K07038	-	ko00000	LexA-binding, inner membrane-associated putative hydrolase
PCFPDMBM_02204	0.0	cysS	6.1.1.16	-	J	ko:K01883	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-I aminoacyl-tRNA synthetase family
PCFPDMBM_02205	1.87e-117	ppiB	5.2.1.8	-	O	ko:K03768	-	ko00000,ko01000,ko03110	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
PCFPDMBM_02206	5.2e-166	lpxH	3.6.1.54	-	S	ko:K03269	ko00540,ko01100,map00540,map01100	ko00000,ko00001,ko00002,ko01000,ko01005	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
PCFPDMBM_02207	1.29e-32	-	-	-	S	-	-	-	Protein of unknown function (DUF1471)
PCFPDMBM_02208	8.7e-28	-	-	-	-	-	-	-	-
PCFPDMBM_02209	1.71e-111	purE	5.4.99.18	-	F	ko:K01588	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
PCFPDMBM_02210	1.19e-256	purK	6.3.4.18	-	F	ko:K01589	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
PCFPDMBM_02211	3.56e-238	selU	-	-	H	ko:K06917	-	ko00000,ko01000,ko03016	Catalyzes the transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA
PCFPDMBM_02212	2.08e-286	omp	-	-	M	-	-	-	Membrane
PCFPDMBM_02213	0.0	ybbP	-	-	Q	ko:K02004	-	ko00000,ko00002,ko02000	ABC-type transport system involved in lysophospholipase L1 biosynthesis permease component
PCFPDMBM_02214	1.55e-152	ybbA	-	-	Q	ko:K02003	-	ko00000,ko00002,ko02000	(ABC) transporter
PCFPDMBM_02215	6.91e-130	tesA	3.1.1.5	-	E	ko:K10804	ko01040,map01040	ko00000,ko00001,ko01000,ko01004	COG2755 Lysophospholipase L1 and related esterases
PCFPDMBM_02216	9.73e-179	ybbO	-	-	S	-	-	-	Belongs to the short-chain dehydrogenases reductases (SDR) family
PCFPDMBM_02217	2.19e-189	ybbN	-	-	O	ko:K03671,ko:K05838	ko04621,ko05418,map04621,map05418	ko00000,ko00001,ko03110	Thioredoxin
PCFPDMBM_02218	5.75e-169	-	-	-	-	-	-	-	-
PCFPDMBM_02219	6.26e-155	qmcA	-	-	O	-	-	-	COG0330 Membrane protease subunits stomatin prohibitin homologs
PCFPDMBM_02220	1.24e-96	ybbJ	-	-	OU	ko:K07340	-	ko00000	Membrane protein implicated in regulation of membrane protease activity
PCFPDMBM_02221	0.0	-	-	-	S	-	-	-	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
PCFPDMBM_02222	1.93e-153	-	-	-	S	-	-	-	Protein of unknown function (DUF3142)
PCFPDMBM_02223	2.16e-89	cueR	-	-	K	ko:K19591	-	ko00000,ko00002,ko01504,ko03000	Transcriptional regulator
PCFPDMBM_02224	0.0	copA	3.6.3.54	-	P	ko:K17686	ko01524,ko04016,map01524,map04016	ko00000,ko00001,ko01000	P-type atpase
PCFPDMBM_02225	4.95e-176	ybaP	-	-	S	ko:K09973	-	ko00000	protein conserved in bacteria
PCFPDMBM_02226	5.61e-103	ybaK	-	-	S	ko:K03976	-	ko00000,ko01000,ko03016	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
PCFPDMBM_02227	0.0	ushA	3.1.3.5, 3.6.1.45	-	F	ko:K11751	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the 5'-nucleotidase family
PCFPDMBM_02228	2.11e-271	fsr	-	-	P	ko:K08223	-	ko00000,ko02000	fosmidomycin resistance protein
PCFPDMBM_02229	0.0	ybaL	-	-	P	ko:K03455	-	ko00000	Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
PCFPDMBM_02230	0.0	gsk	2.7.1.15, 2.7.1.4, 2.7.1.73	-	G	ko:K00847,ko:K00852,ko:K00892	ko00030,ko00051,ko00230,ko00500,ko00520,ko01100,map00030,map00051,map00230,map00500,map00520,map01100	ko00000,ko00001,ko01000	COG0524 Sugar kinases, ribokinase family
PCFPDMBM_02231	1.09e-223	hemH	4.99.1.1, 4.99.1.9	-	H	ko:K01772	ko00860,ko01100,ko01110,map00860,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the ferrous insertion into protoporphyrin IX
PCFPDMBM_02232	1.39e-148	adk	2.7.4.3	-	F	ko:K00939	ko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
PCFPDMBM_02233	0.0	htpG	-	-	O	ko:K04079	ko04141,ko04151,ko04217,ko04612,ko04621,ko04626,ko04657,ko04659,ko04914,ko04915,ko05200,ko05215,ko05418,map04141,map04151,map04217,map04612,map04621,map04626,map04657,map04659,map04914,map04915,map05200,map05215,map05418	ko00000,ko00001,ko01009,ko03029,ko03051,ko03110,ko04131,ko04147	Molecular chaperone. Has ATPase activity
PCFPDMBM_02234	4.37e-141	recR	-	-	L	ko:K06187	ko03440,map03440	ko00000,ko00001,ko03400	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
PCFPDMBM_02235	8.92e-54	ybaB	-	-	S	ko:K09747	-	ko00000	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
PCFPDMBM_02236	0.0	dnaX	2.7.7.7	-	L	ko:K02343	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PCFPDMBM_02237	4.57e-126	apt	2.4.2.7	-	F	ko:K00759	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000,ko04147	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
PCFPDMBM_02238	4.53e-79	ybaN	-	-	S	ko:K09790	-	ko00000	membrane
PCFPDMBM_02239	1.31e-102	priC	-	-	L	ko:K04067	ko03440,map03440	ko00000,ko00001,ko03400	primosomal replication protein
PCFPDMBM_02240	2.32e-21	ybaM	-	-	S	-	-	-	cellular response to cell envelope stress
PCFPDMBM_02241	0.0	kefA	-	-	M	ko:K05802,ko:K22051	-	ko00000,ko02000	mechanosensitive ion channel
PCFPDMBM_02242	1.4e-63	acrR	-	-	K	ko:K03577	-	ko00000,ko00002,ko03000	transcriptional regulator
PCFPDMBM_02243	3.71e-263	acrA	-	-	M	ko:K03585,ko:K18141	ko01501,ko01503,map01501,map01503	ko00000,ko00001,ko00002,ko01504,ko02000,ko03036	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PCFPDMBM_02244	0.0	acrB	-	-	V	ko:K18138,ko:K18142	ko01501,ko01503,map01501,map01503	ko00000,ko00001,ko00002,ko01504,ko02000	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PCFPDMBM_02245	3.52e-92	tomB	-	-	S	ko:K19162	-	ko00000,ko02048	Biofilm formation regulator YbaJ
PCFPDMBM_02246	5.9e-46	hha	-	-	S	ko:K05839	-	ko00000,ko02048	non-specific DNA-binding protein which affects the production of multiple proteins
PCFPDMBM_02247	5.25e-101	ylaC	-	-	S	-	-	-	Membrane
PCFPDMBM_02248	6.82e-25	rpmJ	-	-	J	ko:K02919	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL36 family
PCFPDMBM_02249	0.0	ylaB	-	-	T	-	-	-	signal transduction protein containing sensor and EAL
PCFPDMBM_02250	7.18e-79	ybaA	-	-	S	-	-	-	RNA signal recognition particle 4.5S RNA
PCFPDMBM_02251	0.0	lacZ	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 2 family
PCFPDMBM_02252	4.88e-225	lacI	-	-	K	-	-	-	binds specific sites in lac operon resulting in DNA looping between the operators
PCFPDMBM_02253	1.01e-126	-	-	-	S	ko:K07149	-	ko00000	Membrane
PCFPDMBM_02254	0.0	-	-	-	K	-	-	-	Transcriptional regulator
PCFPDMBM_02255	5.04e-47	-	-	-	-	-	-	-	-
PCFPDMBM_02256	4.66e-48	-	-	-	-	-	-	-	-
PCFPDMBM_02257	7.97e-65	ybaZ	-	-	L	ko:K07443	-	ko00000	PFAM Methylated-DNA- protein -cysteine S-methyltransferase
PCFPDMBM_02258	3.88e-120	ybaY	-	-	S	ko:K09914	-	ko00000	protein conserved in bacteria
PCFPDMBM_02259	8.45e-204	tesB	-	-	I	ko:K10805	ko01040,map01040	ko00000,ko00001,ko01000,ko01004	Acyl-CoA thioesterase
PCFPDMBM_02260	1.03e-271	amtB	-	-	P	ko:K03320	-	ko00000,ko02000	Ammonium transporter
PCFPDMBM_02261	1.73e-70	glnK	-	-	K	ko:K04752	-	ko00000	Belongs to the P(II) protein family
PCFPDMBM_02262	0.0	mdlB	3.6.3.44	-	V	ko:K18104,ko:K18890	ko01501,ko02010,map01501,map02010	ko00000,ko00001,ko00002,ko01000,ko01504,ko02000	Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation
PCFPDMBM_02263	0.0	mdlA	-	-	V	ko:K06147,ko:K18889	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation
PCFPDMBM_02264	3.87e-102	ybaO	-	-	K	ko:K05800	-	ko00000,ko03000	transcriptional regulator
PCFPDMBM_02265	6.32e-253	cysK_2	2.5.1.47	-	E	ko:K01738	ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	cysteine synthase
PCFPDMBM_02266	5.08e-198	cof	-	-	S	ko:K11938	-	ko00000,ko01000	Catalyzes the hydrolysis of 4-amino-2-methyl-5- hydroxymethylpyrimidine pyrophosphate (HMP-PP) to 4-amino-2- methyl-5-hydroxymethylpyrimidine phosphate (HMP-P)
PCFPDMBM_02267	0.0	ybaE	-	-	S	-	-	-	ABC transporter substrate-binding protein
PCFPDMBM_02268	4.49e-167	queC	6.3.4.20	-	F	ko:K06920	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko01000,ko03016	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
PCFPDMBM_02269	7.06e-84	tesC	-	-	S	ko:K12500	-	ko00000,ko01000,ko01004	Thioesterase
PCFPDMBM_02270	2.63e-47	comEA	-	-	L	ko:K02237	-	ko00000,ko00002,ko02044	TIGRFAM competence protein ComEA helix-hairpin-helix
PCFPDMBM_02271	0.0	ppiD	5.2.1.8	-	O	ko:K03770	-	ko00000,ko01000,ko03110	peptidylprolyl isomerase
PCFPDMBM_02272	2.03e-52	hupB	-	-	L	ko:K03530	-	ko00000,ko03032,ko03036,ko03400	Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
PCFPDMBM_02273	0.0	lon	3.4.21.53	-	O	ko:K01338	ko04112,map04112	ko00000,ko00001,ko01000,ko01002	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
PCFPDMBM_02274	2.17e-303	clpX	-	-	O	ko:K03544	ko04112,map04112	ko00000,ko00001,ko03110	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
PCFPDMBM_02275	3.88e-147	clpP	3.4.21.92	-	O	ko:K01358	ko04112,ko04212,map04112,map04212	ko00000,ko00001,ko01000,ko01002	Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
PCFPDMBM_02276	2.8e-294	tig	-	-	D	ko:K03545	-	ko00000	Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
PCFPDMBM_02278	5.75e-70	bolA	-	-	T	ko:K05527	-	ko00000,ko03000	Belongs to the BolA IbaG family
PCFPDMBM_02279	9.16e-125	yajG	-	-	M	ko:K07286	-	ko00000	lipoprotein
PCFPDMBM_02280	0.0	ampG	-	-	P	ko:K08218	ko01501,map01501	ko00000,ko00001,ko00002,ko02000	Major facilitator superfamily
PCFPDMBM_02281	2.03e-221	cyoA	1.10.3.10	-	C	ko:K02297	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	ubiquinol oxidase subunit
PCFPDMBM_02282	0.0	cyoB	1.10.3.10	-	C	ko:K02298	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the heme-copper respiratory oxidase family
PCFPDMBM_02283	7.26e-146	cyoC	-	-	C	ko:K02299	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002	PFAM cytochrome c oxidase, subunit III
PCFPDMBM_02284	3.7e-70	cyoD	-	-	C	ko:K02300	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002	cytochrome o ubiquinol oxidase
PCFPDMBM_02285	1.15e-201	cyoE	2.5.1.141	-	O	ko:K02257	ko00190,ko00860,ko01100,ko01110,ko04714,map00190,map00860,map01100,map01110,map04714	ko00000,ko00001,ko00002,ko01000,ko01006,ko03029	Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group
PCFPDMBM_02286	3.77e-05	-	-	-	-	-	-	-	-
PCFPDMBM_02287	5.12e-303	yajR	-	-	EGP	-	-	-	Major facilitator superfamily
PCFPDMBM_02288	1.66e-106	yajQ	-	-	S	ko:K09767	-	ko00000	Belongs to the UPF0234 family
PCFPDMBM_02289	9.84e-207	panE	1.1.1.169	-	H	ko:K00077	ko00770,ko01100,ko01110,map00770,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
PCFPDMBM_02290	2.62e-131	thiJ	3.5.1.124	-	S	ko:K03152	-	ko00000,ko01000,ko01002	TIGRFAM DJ-1 family protein
PCFPDMBM_02291	0.0	thiI	2.8.1.4	-	H	ko:K03151	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko03016	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
PCFPDMBM_02292	8.89e-47	xseB	3.1.11.6	-	L	ko:K03602	ko03430,map03430	ko00000,ko00001,ko01000,ko03400	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PCFPDMBM_02293	6.35e-201	ispA	2.5.1.1, 2.5.1.10, 2.5.1.29	-	H	ko:K00795,ko:K13789	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko01006	Belongs to the FPP GGPP synthase family
PCFPDMBM_02294	0.0	dxs	2.2.1.7	-	H	ko:K01662	ko00730,ko00900,ko01100,ko01110,ko01130,map00730,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
PCFPDMBM_02295	7.46e-233	yajO	-	-	C	-	-	-	Aldo keto reductase
PCFPDMBM_02296	7.73e-230	thiL	2.7.4.16	-	H	ko:K00946	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
PCFPDMBM_02297	4.86e-92	nusB	-	-	K	ko:K03625	-	ko00000,ko03009,ko03021	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
PCFPDMBM_02298	1.44e-99	ribH	2.5.1.78	-	H	ko:K00794	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin
PCFPDMBM_02299	9.87e-262	ribD	1.1.1.193, 3.5.4.26	-	H	ko:K01498,ko:K11752	ko00740,ko01100,ko01110,ko02024,map00740,map01100,map01110,map02024	ko00000,ko00001,ko00002,ko01000	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
PCFPDMBM_02300	4.38e-102	nrdR	-	-	K	ko:K07738	-	ko00000,ko03000	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
PCFPDMBM_02301	2.9e-117	yajI	-	-	M	-	-	-	Lipoprotein
PCFPDMBM_02302	1.38e-227	tsx	-	-	M	ko:K05517	-	ko00000,ko02000	nucleoside-specific channel-forming protein
PCFPDMBM_02304	1.91e-214	secF	-	-	U	ko:K03074	ko03060,ko03070,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
PCFPDMBM_02305	0.0	secD	-	-	U	ko:K03072	ko03060,ko03070,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
PCFPDMBM_02306	5.86e-68	yajC	-	-	U	ko:K03210	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Preprotein translocase
PCFPDMBM_02307	1.77e-284	tgt	2.4.2.29	-	J	ko:K00773	-	ko00000,ko01000,ko03016	Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
PCFPDMBM_02308	1.96e-251	queA	2.4.99.17	-	J	ko:K07568	-	ko00000,ko01000,ko03016	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
PCFPDMBM_02309	6.26e-137	acpH	3.1.4.14	-	S	ko:K08682	ko00770,map00770	ko00000,ko00001,ko01000	Converts holo-ACP to apo-ACP by hydrolytic cleavage of the phosphopantetheine prosthetic group from ACP
PCFPDMBM_02310	6.24e-145	ahpC	1.11.1.15	-	O	ko:K03386	ko04214,map04214	ko00000,ko00001,ko01000,ko04147	PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
PCFPDMBM_02311	2.85e-214	-	-	-	S	-	-	-	Protein of unknown function (DUF3999)
PCFPDMBM_02312	0.0	-	-	-	S	-	-	-	Predicted membrane protein (DUF2339)
PCFPDMBM_02313	0.0	malZ	3.2.1.135, 3.2.1.20	GH13,GH31	G	ko:K01187,ko:K21575	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 13 family
PCFPDMBM_02314	0.0	proY	-	-	E	ko:K03293,ko:K11736	-	ko00000,ko02000	Cryptic permease that may be involved in the transport of proline across the inner membrane
PCFPDMBM_02315	5.38e-291	brnQ	-	-	P	ko:K03311	-	ko00000	Component of the transport system for branched-chain amino acids
PCFPDMBM_02316	3.98e-314	phoR	2.7.13.3	-	T	ko:K07636	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
PCFPDMBM_02317	5.47e-167	phoB	-	-	K	ko:K07657	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	phosphate regulon transcriptional regulatory protein PhoB
PCFPDMBM_02318	1.73e-270	sbcD	-	-	L	ko:K03547	-	ko00000,ko03400	SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity
PCFPDMBM_02319	0.0	sbcC	-	-	L	ko:K03546	-	ko00000,ko03400	SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity
PCFPDMBM_02320	8.08e-205	mak	2.7.1.2, 2.7.1.4	-	GK	ko:K00845,ko:K00847	ko00010,ko00051,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00051,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	ROK family
PCFPDMBM_02321	1.83e-210	rdgC	-	-	L	ko:K03554	-	ko00000,ko03400	May be involved in recombination
PCFPDMBM_02322	2.7e-61	ppnP	2.4.2.1, 2.4.2.2	-	S	ko:K09913	ko00230,ko00240,map00230,map00240	ko00000,ko00001,ko01000	Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions
PCFPDMBM_02323	2.29e-132	aroM	-	-	E	ko:K14591	-	ko00000	AroM protein
PCFPDMBM_02324	5.51e-38	yaiA	-	-	S	-	-	-	YaiA protein
PCFPDMBM_02325	3.69e-113	aroL	2.7.1.71	-	F	ko:K00891	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
PCFPDMBM_02326	3.72e-100	yaiI	-	-	S	ko:K09768	-	ko00000	Belongs to the UPF0178 family
PCFPDMBM_02327	2.65e-178	proC	1.5.1.2	-	E	ko:K00286	ko00330,ko01100,ko01110,ko01130,ko01230,map00330,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
PCFPDMBM_02328	2.89e-222	adrA	2.7.7.65	-	T	ko:K18968	ko02026,map02026	ko00000,ko00001,ko01000,ko02000	Diguanylate cyclase
PCFPDMBM_02329	5.77e-32	psiF	-	-	S	-	-	-	Phosphate starvation-inducible protein, PSIF
PCFPDMBM_02330	2.45e-40	iraP	-	-	S	-	-	-	Inhibits RpoS proteolysis by regulating RssB activity, thereby increasing the stability of the sigma stress factor RpoS especially during phosphate starvation, but also in stationary phase and during nitrogen starvation. Its effect on RpoS stability is due to its interaction with RssB, which probably blocks the interaction of RssB with RpoS, and the consequent delivery of the RssB-RpoS complex to the ClpXP protein degradation pathway
PCFPDMBM_02331	3.64e-260	mdtG	-	-	P	ko:K08161	-	ko00000,ko02000	Multidrug resistance protein MdtG
PCFPDMBM_02332	6.03e-160	-	-	-	S	-	-	-	extensin
PCFPDMBM_02333	2.56e-253	ddl	6.3.2.4	-	F	ko:K01921	ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Belongs to the D-alanine--D-alanine ligase family
PCFPDMBM_02334	1.02e-46	yaiZ	-	-	S	-	-	-	Protein of unknown function (DUF2754)
PCFPDMBM_02335	7.21e-62	yaiY	-	-	S	-	-	-	Protein of unknown function (DUF2755)
PCFPDMBM_02336	3.13e-253	yaiW	-	-	S	-	-	-	Lipoprotein
PCFPDMBM_02337	3.31e-282	sbmA	-	-	I	ko:K17938	-	ko00000,ko02000	In Escherichia coli SbmA is involved in uptake of microcin J25
PCFPDMBM_02338	1.64e-263	ampH	3.4.16.4	-	V	ko:K18988	-	ko00000,ko01000,ko01002,ko01011	This protein has no known enzymatic function
PCFPDMBM_02339	8.43e-122	iprA	-	-	T	-	-	-	Involved in oxidative stress resistance
PCFPDMBM_02340	0.0	-	-	-	MU	-	-	-	outer membrane autotransporter barrel
PCFPDMBM_02341	4.25e-223	hemB	4.2.1.24	-	H	ko:K01698	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the ALAD family
PCFPDMBM_02342	0.0	-	-	-	I	-	-	-	Acyltransferase
PCFPDMBM_02343	1.16e-204	tauD	1.14.11.17	-	Q	ko:K03119	ko00430,ko00920,map00430,map00920	ko00000,ko00001,ko01000	taurine catabolism dioxygenase
PCFPDMBM_02344	5.58e-167	tauC	-	-	P	ko:K15552	ko00920,ko02010,map00920,map02010	ko00000,ko00001,ko00002,ko02000	ABC-type nitrate sulfonate bicarbonate transport system permease component
PCFPDMBM_02345	2.97e-168	tauB	3.6.3.36	-	P	ko:K10831	ko00920,ko02010,map00920,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
PCFPDMBM_02346	3.2e-216	tauA	-	-	P	ko:K15551	ko00920,ko02010,map00920,map02010	ko00000,ko00001,ko00002,ko02000	taurine ABC transporter
PCFPDMBM_02347	2.81e-141	uhpA	-	-	K	ko:K07689,ko:K20264	ko02020,ko02024,ko02025,ko02026,ko05111,map02020,map02024,map02025,map02026,map05111	ko00000,ko00001,ko00002,ko02022	response regulator
PCFPDMBM_02348	0.0	uhpB	2.7.13.3	-	T	ko:K07675,ko:K20263	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
PCFPDMBM_02349	4.8e-316	uhpC	-	-	G	ko:K07783	ko02020,map02020	ko00000,ko00001,ko02000	transporter
PCFPDMBM_02350	1.87e-247	afuA	-	-	P	ko:K02012	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC-type Fe3 transport system, periplasmic component
PCFPDMBM_02351	0.0	afuB	-	-	P	ko:K02011	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PCFPDMBM_02352	6.67e-239	fbpC	3.6.3.30	-	P	ko:K02010	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex FbpABC involved in Fe(3 ) ions import. Responsible for energy coupling to the transport system
PCFPDMBM_02353	7e-215	mmuM	2.1.1.10	-	H	ko:K00547	ko00270,ko01100,ko01110,map00270,map01100,map01110	ko00000,ko00001,ko01000	homocysteine
PCFPDMBM_02354	0.0	mmuP	-	-	E	ko:K11733,ko:K16235	-	ko00000,ko02000	amino acid
PCFPDMBM_02356	3.47e-247	VP2476	-	-	S	-	-	-	permease
PCFPDMBM_02357	0.0	-	-	-	T	-	-	-	(GGDEF) domain
PCFPDMBM_02358	2.01e-161	-	-	-	S	-	-	-	Protein of unknown function DUF262
PCFPDMBM_02359	3.12e-58	-	-	-	K	-	-	-	Membrane
PCFPDMBM_02360	0.0	-	-	-	G	-	-	-	Glucoamylase and related glycosyl hydrolases
PCFPDMBM_02362	1.91e-134	yagT	-	-	C	ko:K13483	ko00230,ko01100,ko01120,map00230,map01100,map01120	ko00000,ko00001,ko00002	Aerobic-type carbon monoxide dehydrogenase small subunit CoxS
PCFPDMBM_02363	7.2e-212	yagS	1.17.1.4	-	C	ko:K11178	ko00230,ko01100,ko01120,map00230,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
PCFPDMBM_02364	0.0	yagR	1.17.1.4	-	C	ko:K11177	ko00230,ko01100,ko01120,map00230,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Xanthine dehydrogenase
PCFPDMBM_02365	5.69e-139	yagQ	-	-	O	ko:K07402	-	ko00000	Xanthine and CO dehydrogenases maturation factor XdhC CoxF family
PCFPDMBM_02366	2.05e-234	purR9	-	-	K	ko:K06145	-	ko00000,ko03000	Bacterial regulatory proteins, lacI family
PCFPDMBM_02367	6.6e-168	yafS	-	-	Q	-	-	-	Methyl-transferase
PCFPDMBM_02368	7.47e-115	rnhA	3.1.26.4	-	L	ko:K03469	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PCFPDMBM_02369	1.44e-171	dnaQ	2.7.7.7, 3.1.26.4	-	L	ko:K02342,ko:K14159	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
PCFPDMBM_02371	3.02e-92	-	-	-	C	ko:K12262	-	ko00000	Prokaryotic cytochrome b561
PCFPDMBM_02372	8.08e-187	yafV	3.5.1.3	-	S	ko:K11206,ko:K13566	ko00250,map00250	ko00000,ko00001,ko01000	Hydrolase
PCFPDMBM_02373	0.0	fadE	-	-	I	ko:K06445	ko00071,ko01100,ko01212,map00071,map01100,map01212	ko00000,ko00001,ko00002,ko01000	acyl-CoA dehydrogenase
PCFPDMBM_02374	1.59e-132	gmhA	5.3.1.28	-	G	ko:K03271,ko:K12961	ko00540,ko01100,map00540,map01100	ko00000,ko00001,ko00002,ko01000,ko01005,ko03036	Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate
PCFPDMBM_02375	5.95e-193	yafJ	-	-	S	-	-	-	glutamine amidotransferase
PCFPDMBM_02376	5.88e-175	yafK	-	-	S	-	-	-	ErfK YbiS YcfS YnhG family protein
PCFPDMBM_02377	1.1e-294	nqrA	1.6.5.8	-	C	ko:K00346	-	ko00000,ko01000	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
PCFPDMBM_02378	2.91e-295	nqrB	1.6.5.8	-	C	ko:K00347	-	ko00000,ko01000	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
PCFPDMBM_02379	1.04e-177	nqrC	1.6.5.8	-	C	ko:K00348	-	ko00000,ko01000	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
PCFPDMBM_02380	6.84e-139	nqrD	1.6.5.8	-	C	ko:K00349	-	ko00000,ko01000	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
PCFPDMBM_02381	1.91e-129	nqrE	1.6.5.8	-	C	ko:K00350	-	ko00000,ko01000	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
PCFPDMBM_02382	8.01e-295	nqrF	1.6.5.8	-	C	ko:K00351	-	ko00000,ko01000	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. The first step is catalyzed by NqrF, which accepts electrons from NADH and reduces ubiquinone-1 to ubisemiquinone by a one-electron transfer pathway
PCFPDMBM_02383	2.67e-39	-	-	-	S	ko:K05952	-	ko00000	protein conserved in bacteria
PCFPDMBM_02384	6.95e-180	ugpQ_1	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	glycerophosphoryl diester phosphodiesterase
PCFPDMBM_02385	2.53e-243	dinB	2.7.7.7	-	L	ko:K02346	-	ko00000,ko01000,ko03400	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
PCFPDMBM_02386	0.0	pepD	-	-	E	ko:K01270	ko00480,ko01100,map00480,map01100	ko00000,ko00001,ko01000,ko01002	aminoacyl-histidine dipeptidase
PCFPDMBM_02387	1.3e-109	gpt	2.4.2.22	-	F	ko:K00769	ko00230,ko01100,ko01110,map00230,map01100,map01110	ko00000,ko00001,ko01000	Acts on guanine, xanthine and to a lesser extent hypoxanthine
PCFPDMBM_02388	1.71e-304	frsA	-	-	S	ko:K11750	-	ko00000,ko01000	Belongs to the UPF0255 family
PCFPDMBM_02389	2.32e-87	crl	-	-	K	ko:K11926	-	ko00000,ko03000	Binds to the sigma-S subunit of RNA polymerase, activating expression of sigma-S-regulated genes. Stimulates RNA polymerase holoenzyme formation and may bind to several other sigma factors, such as sigma-70 and sigma-32
PCFPDMBM_02390	4.99e-251	phoE	-	-	M	ko:K09475,ko:K09476,ko:K11929,ko:K14062	ko01501,ko02020,map01501,map02020	ko00000,ko00001,ko00002,ko01504,ko02000	Belongs to the Gram-negative porin family
PCFPDMBM_02391	9.06e-258	proB	2.7.2.11	-	E	ko:K00931	ko00330,ko00332,ko01100,ko01130,ko01230,map00330,map00332,map01100,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
PCFPDMBM_02392	8.51e-286	proA	1.2.1.41	-	E	ko:K00147	ko00330,ko00332,ko01100,ko01110,ko01130,ko01230,map00330,map00332,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
PCFPDMBM_02393	0.0	gmr_2	-	-	T	-	-	-	Diguanylate cyclase
PCFPDMBM_02398	0.0	purH	2.1.2.3, 3.5.4.10	-	F	ko:K00602	ko00230,ko00670,ko01100,ko01110,ko01130,ko01523,map00230,map00670,map01100,map01110,map01130,map01523	ko00000,ko00001,ko00002,ko01000,ko04147	bifunctional purine biosynthesis protein purh
PCFPDMBM_02399	3.62e-305	purD	6.3.2.6, 6.3.4.13	-	F	ko:K01945,ko:K13713	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the GARS family
PCFPDMBM_02400	7.05e-141	yjaH	-	-	S	-	-	-	Protein of unknown function (DUF1481)
PCFPDMBM_02401	3.09e-54	hupA	-	-	L	ko:K03530,ko:K05787	-	ko00000,ko03032,ko03036,ko03400	Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
PCFPDMBM_02402	2.35e-138	yjaG	-	-	S	ko:K09891	-	ko00000	protein conserved in bacteria
PCFPDMBM_02403	6.15e-161	nfi	3.1.21.7	-	L	ko:K05982	-	ko00000,ko01000,ko03400	DNA repair enzyme involved in the repair of deaminated bases. Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA
PCFPDMBM_02404	1.39e-259	hemE	4.1.1.37	-	H	ko:K01599	ko00860,ko01100,ko01110,map00860,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
PCFPDMBM_02405	3.56e-186	nudC	3.6.1.22	-	L	ko:K03426	ko00760,ko01100,ko04146,map00760,map01100,map04146	ko00000,ko00001,ko01000	nadh pyrophosphatase
PCFPDMBM_02406	1.26e-111	rsd	-	-	K	ko:K07740	-	ko00000	Binds RpoD and negatively regulates RpoD-mediated transcription activation by preventing the interaction between the primary sigma factor RpoD with the catalytic core of the RNA polymerase and with promoter DNA. May be involved in replacement of the RNA polymerase sigma subunit from RpoD to RpoS during the transition from exponential growth to the stationary phase
PCFPDMBM_02407	0.0	thiC	4.1.99.17	-	H	ko:K03147	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
PCFPDMBM_02408	2.12e-137	thiE	2.5.1.3, 2.7.1.49, 2.7.4.7	-	H	ko:K00788,ko:K14153	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)
PCFPDMBM_02409	1.87e-169	thiF	2.7.7.73, 2.7.7.80	-	H	ko:K03148,ko:K21029	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000	COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2
PCFPDMBM_02410	7.67e-35	thiS	-	-	H	ko:K03154	ko04122,map04122	ko00000,ko00001	ThiS family
PCFPDMBM_02411	2.87e-171	thiG	2.8.1.10	-	H	ko:K03149	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000	Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S
PCFPDMBM_02412	4.41e-270	thiH	4.1.99.19	-	C	ko:K03150	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000	In Escherichia coli this enzyme functions in thiamine biosynthesis along with thiFSGI and iscS
PCFPDMBM_02413	1.63e-50	celA	2.7.1.196, 2.7.1.205	-	G	ko:K02760	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphotransferase System
PCFPDMBM_02414	1.47e-61	chbA_4	2.7.1.196, 2.7.1.205	-	G	ko:K02759	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphotransferase System
PCFPDMBM_02415	0.0	rpoC	2.7.7.6	-	K	ko:K03046	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PCFPDMBM_02416	0.0	rpoB	2.7.7.6	-	K	ko:K03043	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PCFPDMBM_02417	1.79e-65	rplL	-	-	J	ko:K02935	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
PCFPDMBM_02418	2.63e-104	rplJ	-	-	J	ko:K02864	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
PCFPDMBM_02419	1.04e-153	rplA	-	-	J	ko:K02863	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
PCFPDMBM_02420	4.46e-94	rplK	-	-	J	ko:K02867	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
PCFPDMBM_02421	1.75e-128	nusG	-	-	K	ko:K02601	-	ko00000,ko03009,ko03021	Participates in transcription elongation, termination and antitermination. In the absence of Rho, increases the rate of transcription elongation by the RNA polymerase (RNAP), probably by partially suppressing pausing. In the presence of Rho, modulates most Rho-dependent termination events by interacting with the RNAP to render the complex more susceptible to the termination activity of Rho. May be required to overcome a kinetic limitation of Rho to function at certain terminators. Also involved in ribosomal RNA transcriptional antitermination
PCFPDMBM_02422	1.69e-75	secE	-	-	U	ko:K03073	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
PCFPDMBM_02423	1.5e-40	bfd	-	-	P	ko:K02192	-	ko00000	could be a general redox and or regulatory component participating in the iron storage mobilization functions of BFR. Could participate in the release or the delivery of iron from to bacterioferritin (or other iron complexes)
PCFPDMBM_02424	1.97e-107	bfr	1.16.3.1	-	P	ko:K03594	ko00860,map00860	ko00000,ko00001,ko01000	Iron-storage protein, whose ferroxidase center binds Fe(2 ) ions, oxidizes them by dioxygen to Fe(3 ), and participates in the subsequent Fe(3 ) oxide mineral core formation within the central cavity of the protein complex
PCFPDMBM_02425	8.69e-93	outO	3.4.23.43	-	NOU	ko:K02464,ko:K02506,ko:K02654	ko03070,map03070	ko00000,ko00001,ko00002,ko01000,ko01002,ko02035,ko02044	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
PCFPDMBM_02426	3.38e-66	rpsJ	-	-	J	ko:K02946	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Involved in the binding of tRNA to the ribosomes
PCFPDMBM_02427	7.2e-144	rplC	-	-	J	ko:K02906	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
PCFPDMBM_02428	3.71e-133	rplD	-	-	J	ko:K02926	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the polypeptide exit tunnel
PCFPDMBM_02429	2.07e-61	rplW	-	-	J	ko:K02892	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
PCFPDMBM_02430	3.18e-197	rplB	-	-	J	ko:K02886	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
PCFPDMBM_02431	1.64e-61	rpsS	-	-	J	ko:K02965	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
PCFPDMBM_02432	7.12e-69	rplV	-	-	J	ko:K02890	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
PCFPDMBM_02433	5.64e-162	rpsC	-	-	J	ko:K02982	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
PCFPDMBM_02434	4.54e-91	rplP	-	-	J	ko:K02878	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
PCFPDMBM_02435	4.23e-33	rpmC	-	-	J	ko:K02904	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uL29 family
PCFPDMBM_02436	1.6e-53	rpsQ	-	-	J	ko:K02961	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
PCFPDMBM_02437	7.01e-82	rplN	-	-	J	ko:K02874	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
PCFPDMBM_02438	1.04e-65	rplX	-	-	J	ko:K02895	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
PCFPDMBM_02439	1.39e-124	rplE	-	-	J	ko:K02931	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
PCFPDMBM_02440	6.89e-65	rpsN	-	-	J	ko:K02954	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PCFPDMBM_02441	3.66e-85	rpsH	-	-	J	ko:K02994	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
PCFPDMBM_02442	1.44e-116	rplF	-	-	J	ko:K02933	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
PCFPDMBM_02443	4.5e-73	rplR	-	-	J	ko:K02881	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
PCFPDMBM_02444	1.59e-110	rpsE	-	-	J	ko:K02988	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
PCFPDMBM_02445	3.9e-34	rpmD	-	-	J	ko:K02907	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L30
PCFPDMBM_02446	2.97e-84	rplO	-	-	J	ko:K02876	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	binds to the 23S rRNA
PCFPDMBM_02447	6.84e-310	secY	-	-	U	ko:K03076	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
PCFPDMBM_02448	1.44e-74	rpsM	-	-	J	ko:K02952	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
PCFPDMBM_02449	6.15e-139	rpsD	-	-	J	ko:K02986	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
PCFPDMBM_02450	7.75e-233	rpoA	2.7.7.6	-	K	ko:K03040	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PCFPDMBM_02451	1.91e-81	rplQ	-	-	J	ko:K02879	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L17
PCFPDMBM_02452	2.01e-67	yhdN	-	-	S	-	-	-	PFAM DnaJ homologue, subfamily C, member 28, conserved domain
PCFPDMBM_02453	7.15e-95	zntR	-	-	K	ko:K08365,ko:K13638	-	ko00000,ko03000	transcriptional regulator
PCFPDMBM_02454	4.74e-31	arfA	-	-	S	ko:K09890	-	ko00000,ko03012	protein conserved in bacteria
PCFPDMBM_02455	9.13e-85	mscL	-	-	M	ko:K03282	-	ko00000,ko02000	Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
PCFPDMBM_02456	0.0	trkA	-	-	P	ko:K03499	-	ko00000,ko02000	found to be peripherally associated with the inner membrane in Escherichia coli
PCFPDMBM_02457	1.04e-310	sun	2.1.1.176	-	J	ko:K03500	-	ko00000,ko01000,ko03009	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
PCFPDMBM_02458	3.76e-217	fmt	2.1.2.9	-	J	ko:K00604	ko00670,ko00970,map00670,map00970	ko00000,ko00001,ko01000	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
PCFPDMBM_02459	3.59e-113	def	3.5.1.88	-	J	ko:K01462	-	ko00000,ko01000	Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
PCFPDMBM_02460	4.48e-241	smf	-	-	LU	ko:K04096	-	ko00000	Rossmann fold nucleotide-binding protein involved in DNA uptake
PCFPDMBM_02461	3.68e-107	smg	-	-	S	ko:K03747	-	ko00000	Belongs to the Smg family
PCFPDMBM_02462	9.05e-101	yrdD	-	-	L	ko:K07479	-	ko00000	dNA topoisomerase
PCFPDMBM_02463	2.75e-125	tsaC	2.7.7.87	-	J	ko:K07566	-	ko00000,ko01000,ko03009,ko03016	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Catalyzes the conversion of L-threonine, HCO(3)(-) CO(2) and ATP to give threonylcarbamoyl-AMP (TC-AMP) as the acyladenylate intermediate, with the release of diphosphate
PCFPDMBM_02464	2.15e-174	aroE	1.1.1.25	-	E	ko:K00014	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
PCFPDMBM_02465	4.34e-48	yrdB	-	-	S	-	-	-	Protein of unknown function (DUF1488)
PCFPDMBM_02466	9.55e-114	yrdA	-	-	S	-	-	-	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
PCFPDMBM_02468	1.92e-46	vagC	-	-	S	ko:K18829	-	ko00000,ko02048	Virulence-associated protein
PCFPDMBM_02469	1.14e-86	vapC	-	-	S	ko:K18828	-	ko00000,ko01000,ko02048,ko03016	PIN domain
PCFPDMBM_02470	2.16e-283	-	-	-	L	ko:K07459	-	ko00000	ATP-dependent endonuclease
PCFPDMBM_02471	1.03e-204	-	3.5.2.6	-	V	ko:K17836	ko00311,ko01130,ko01501,map00311,map01130,map01501	ko00000,ko00001,ko00002,ko01000,ko01504	Beta-lactamase
PCFPDMBM_02472	2.99e-122	-	-	-	L	-	-	-	Resolvase, N terminal domain
PCFPDMBM_02473	0.0	tnpA	-	-	L	-	-	-	Transposase
PCFPDMBM_02474	3.4e-70	-	-	-	L	ko:K07459	-	ko00000	ATP-dependent endonuclease
PCFPDMBM_02475	1.12e-242	-	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	DNA helicase
PCFPDMBM_02476	1.24e-182	-	-	-	L	ko:K07451	-	ko00000,ko01000,ko02048	HNH endonuclease
PCFPDMBM_02477	2.07e-73	-	-	-	S	-	-	-	Domain of unknown function (DUF305)
PCFPDMBM_02478	8.55e-50	-	-	-	-	-	-	-	-
PCFPDMBM_02479	0.0	cusS	2.7.13.3	-	T	ko:K07636,ko:K07644	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko01504,ko02022	Member of a two-component regulatory system
PCFPDMBM_02480	2.49e-157	copR	-	-	KT	ko:K07665	ko02020,map02020	ko00000,ko00001,ko00002,ko01504,ko02022	COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PCFPDMBM_02481	0.0	oprJ	-	-	MU	ko:K07796,ko:K08721,ko:K18139	ko01501,ko02020,ko02024,map01501,map02020,map02024	ko00000,ko00001,ko00002,ko01504,ko02000	Outer membrane efflux protein
PCFPDMBM_02482	1.19e-77	cusF	-	-	S	ko:K07810	ko02020,map02020	ko00000,ko00001	Copper binding periplasmic protein CusF
PCFPDMBM_02483	4.11e-311	cusB	-	-	M	ko:K07798	ko02020,map02020	ko00000,ko00001,ko02000	Long alpha hairpin domain of cation efflux system protein, CusB
PCFPDMBM_02484	0.0	cusA	-	-	P	ko:K07787	ko02020,map02020	ko00000,ko00001,ko02000	AcrB/AcrD/AcrF family
PCFPDMBM_02485	1.08e-96	copG	-	-	S	-	-	-	Protein of unknown function, DUF
PCFPDMBM_02486	0.0	copA1	3.6.3.54	-	P	ko:K17686	ko01524,ko04016,map01524,map04016	ko00000,ko00001,ko01000	P-type atpase
PCFPDMBM_02487	1.58e-20	-	-	-	S	-	-	-	Protein of unknown function (DUF2933)
PCFPDMBM_02488	2.13e-172	-	-	-	M	-	-	-	Peptidase family M23
PCFPDMBM_02489	7.07e-09	-	-	-	S	-	-	-	alpha beta
PCFPDMBM_02490	3.39e-78	-	-	-	L	-	-	-	Resolvase, N terminal domain
PCFPDMBM_02492	8.73e-84	-	-	-	S	-	-	-	Protein of unknown function (DUF2787)
PCFPDMBM_02493	7.72e-97	-	-	-	L	ko:K03630	-	ko00000	RadC-like JAB domain
PCFPDMBM_02494	2.26e-293	-	-	-	L	ko:K06919	-	ko00000	D5 N terminal like
PCFPDMBM_02496	0.0	-	-	-	L	-	-	-	Phage integrase family
PCFPDMBM_02498	3.06e-201	-	-	-	K	-	-	-	AraC-like ligand binding domain
PCFPDMBM_02499	1.97e-121	-	-	-	E	-	-	-	Lysine exporter protein (LYSE YGGA)
PCFPDMBM_02500	7.33e-135	yjdC	-	-	K	-	-	-	Transcriptional regulator
PCFPDMBM_02501	0.0	dsbD	1.8.1.8	-	CO	ko:K04084	-	ko00000,ko01000,ko03110	Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps
PCFPDMBM_02502	1.99e-69	cutA	-	-	P	ko:K03926	-	ko00000	Involved in resistance toward heavy metals
PCFPDMBM_02503	1.4e-283	dcuA	-	-	S	ko:K07791	-	ko00000,ko02000	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
PCFPDMBM_02504	0.0	aspA	4.3.1.1	-	E	ko:K01744	ko00250,ko01100,map00250,map01100	ko00000,ko00001,ko01000	Aspartate ammonia-lyase
PCFPDMBM_02505	1.27e-93	fxsA	-	-	S	ko:K07113	-	ko00000	protein affecting phage T7 exclusion by the F plasmid
PCFPDMBM_02506	4.16e-279	yjeH	-	-	E	ko:K03757,ko:K03759,ko:K16263	-	ko00000,ko02000	amino acid
PCFPDMBM_02507	2.27e-59	groS	-	-	O	ko:K04078	-	ko00000,ko03029,ko03110	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
PCFPDMBM_02508	0.0	groL	-	-	O	ko:K04077	ko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
PCFPDMBM_02509	3.04e-71	yjeI	-	-	S	-	-	-	Membrane
PCFPDMBM_02512	9.65e-180	dkgB	1.1.1.346	-	S	ko:K06221,ko:K06222	-	ko00000,ko01000	reductase
PCFPDMBM_02513	2.24e-206	yafC	-	-	K	-	-	-	Transcriptional regulator
PCFPDMBM_02514	9.26e-254	ydhP	-	-	EGP	ko:K18567,ko:K19577	-	ko00000,ko02000	Major Facilitator
PCFPDMBM_02515	9.44e-191	yafD	-	-	S	-	-	-	Endonuclease Exonuclease Phosphatase
PCFPDMBM_02516	1.31e-167	yafE	-	-	Q	-	-	-	methyltransferase
PCFPDMBM_02517	4.72e-271	mltD	-	-	M	ko:K08307	-	ko00000,ko01000,ko01011	COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains)
PCFPDMBM_02518	2.19e-76	gloB	3.1.2.6	-	S	ko:K01069	ko00620,map00620	ko00000,ko00001,ko01000	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
PCFPDMBM_02519	2.05e-109	ISPlu13C	-	-	L	-	-	-	Transposase
PCFPDMBM_02520	5.86e-14	uvrD-2	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	DNA helicase
PCFPDMBM_02521	4.28e-185	folK	2.5.1.15, 2.7.6.3	-	H	ko:K13941,ko:K18824,ko:K18974	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000,ko01504	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
PCFPDMBM_02522	1.15e-67	-	-	-	G	-	-	-	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
PCFPDMBM_02523	0.0	-	-	-	M	-	-	-	Putative transposase
PCFPDMBM_02524	2.45e-48	-	-	-	-	-	-	-	-
PCFPDMBM_02525	8.77e-156	-	-	-	L	-	-	-	Resolvase, N terminal domain
PCFPDMBM_02526	3e-54	-	-	-	S	-	-	-	MbeB-like, N-term conserved region
PCFPDMBM_02531	3.89e-48	ybaQ	-	-	K	ko:K21498	-	ko00000,ko02048	addiction module antidote protein, HigA family
PCFPDMBM_02532	4.48e-63	-	-	-	S	-	-	-	Bacterial mobilisation protein (MobC)
PCFPDMBM_02533	8.27e-186	csgG	-	-	M	ko:K06214	-	ko00000,ko02044	Curli production assembly/transport component CsgG
PCFPDMBM_02534	7.04e-108	ycdZ	-	-	S	-	-	-	Protein of unknown function (DUF1097)
PCFPDMBM_02535	7.68e-129	ycdY	-	-	S	-	-	-	chaperone
PCFPDMBM_02536	1.48e-163	ycdX	-	-	E	ko:K04477	-	ko00000	Belongs to the PHP family
PCFPDMBM_02537	4.41e-219	ghrA	1.1.1.79, 1.1.1.81	-	EH	ko:K12972	ko00260,ko00620,ko00630,ko01100,ko01110,ko01120,map00260,map00620,map00630,map01100,map01110,map01120	ko00000,ko00001,ko01000	D-isomer specific 2-hydroxyacid dehydrogenase
PCFPDMBM_02539	5.66e-210	-	-	-	V	ko:K07454	-	ko00000	HNH endonuclease
PCFPDMBM_02540	0.0	-	-	-	O	-	-	-	heat shock protein binding
PCFPDMBM_02541	1.14e-65	symE	-	-	J	ko:K19048	-	ko00000,ko02048	Involved in the degradation and recycling of damaged RNA. It is itself a target for degradation by the ATP-dependent protease Lon
PCFPDMBM_02542	6.72e-36	-	-	-	S	-	-	-	PAAR repeat-containing protein
PCFPDMBM_02543	0.0	-	-	-	S	ko:K11910	-	ko00000,ko00002,ko02044	type VI secretion-associated protein
PCFPDMBM_02544	0.0	-	-	-	S	ko:K11891	ko02025,ko03070,map02025,map03070	ko00000,ko00001,ko00002,ko02044	Intracellular multiplication and human macrophage-killing
PCFPDMBM_02548	3.11e-09	-	-	-	L	-	-	-	transposition, DNA-mediated
PCFPDMBM_02549	6.91e-159	-	-	-	L	-	-	-	transposition, DNA-mediated
PCFPDMBM_02550	0.0	-	-	-	E	-	-	-	Prephenate dehydrogenase
PCFPDMBM_02551	2.41e-50	-	-	-	S	-	-	-	PAAR motif
PCFPDMBM_02552	0.0	-	-	-	S	ko:K11904	ko03070,map03070	ko00000,ko00001,ko00002,ko02044	Uncharacterized protein conserved in bacteria (DUF2345)
PCFPDMBM_02553	0.0	clpV	-	-	O	ko:K11907	ko02025,ko03070,map02025,map03070	ko00000,ko00001,ko00002,ko02044	C-terminal, D2-small domain, of ClpB protein
PCFPDMBM_02554	5.82e-116	hcp3	-	-	S	ko:K11903	ko02025,ko03070,map02025,map03070	ko00000,ko00001,ko00002,ko02044	Type VI secretion system effector
PCFPDMBM_02555	0.0	-	-	-	M	-	-	-	Belongs to the ompA family
PCFPDMBM_02556	2.29e-155	-	-	-	S	ko:K11892	ko03070,map03070	ko00000,ko00001,ko00002,ko02044	Type VI secretion system protein DotU
PCFPDMBM_02557	2.38e-309	-	-	-	S	ko:K11893	ko02025,map02025	ko00000,ko00001,ko00002,ko02044	type VI secretion protein
PCFPDMBM_02558	1.9e-119	-	-	-	S	ko:K11900	ko02025,map02025	ko00000,ko00001,ko00002,ko02044	Type VI secretion protein, EvpB/VC_A0108, tail sheath
PCFPDMBM_02559	1.28e-152	-	-	-	S	ko:K11900	ko02025,map02025	ko00000,ko00001,ko00002,ko02044	type VI secretion protein
PCFPDMBM_02560	7.38e-62	-	-	-	S	ko:K11900	ko02025,map02025	ko00000,ko00001,ko00002,ko02044	type VI secretion protein
PCFPDMBM_02561	6.69e-97	-	-	-	S	ko:K11901	ko02025,map02025	ko00000,ko00001,ko00002,ko02044	Type VI secretion system, VipA, VC_A0107 or Hcp2
PCFPDMBM_02562	0.0	mppA	-	-	E	ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
PCFPDMBM_02563	3.57e-176	mpaA	-	-	E	ko:K14054	-	ko00000	Murein peptide amidase A
PCFPDMBM_02564	5.02e-209	ycjG	5.1.1.20, 5.5.1.1	-	M	ko:K01856,ko:K19802	ko00361,ko00362,ko00364,ko00623,ko01100,ko01120,ko01220,map00361,map00362,map00364,map00623,map01100,map01120,map01220	ko00000,ko00001,ko00002,ko01000	Belongs to the mandelate racemase muconate lactonizing enzyme family
PCFPDMBM_02565	1.3e-110	tpx	1.11.1.15	-	O	ko:K11065	-	ko00000,ko01000	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
PCFPDMBM_02566	6.03e-149	xylR	-	-	K	ko:K02529	-	ko00000,ko03000	Transcriptional regulator
PCFPDMBM_02567	1.19e-238	-	-	-	G	-	-	-	Protein of unknown function (DUF1593)
PCFPDMBM_02568	0.0	tyrR	-	-	K	ko:K03721	-	ko00000,ko03000	Transcriptional regulator of aromatic amino acids metabolism
PCFPDMBM_02569	5.31e-225	ycjF	-	-	S	ko:K08990	-	ko00000	UPF0283 membrane protein
PCFPDMBM_02570	0.0	ycjX	-	-	S	ko:K06918	-	ko00000	COG3106 Predicted ATPase
PCFPDMBM_02571	9.03e-215	ycjW	-	-	K	-	-	-	helix_turn _helix lactose operon repressor
PCFPDMBM_02572	7.69e-225	ompG	-	-	M	ko:K14053	-	ko00000,ko02000	Outer membrane protein G (OmpG)
PCFPDMBM_02573	4.24e-248	ycjV	-	-	P	ko:K10112	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
PCFPDMBM_02574	5.82e-130	ycjU	5.4.2.6	-	G	ko:K01838	ko00500,map00500	ko00000,ko00001,ko01000	beta-phosphoglucomutase
PCFPDMBM_02575	0.0	ycjT	2.4.1.64, 3.2.1.28, 5.4.2.6	GH37,GH65	G	ko:K01194,ko:K01838,ko:K04844,ko:K05342	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko00537,ko01000	hydrolase family 65, central catalytic
PCFPDMBM_02576	2.21e-234	ycjS	-	-	S	-	-	-	Oxidoreductase family, C-terminal alpha/beta domain
PCFPDMBM_02577	6.37e-187	ycjR	5.1.3.30, 5.1.3.31	-	G	ko:K18910	-	ko00000,ko01000	isomerase activity
PCFPDMBM_02578	2.58e-253	-	1.1.1.2	-	E	ko:K00002	ko00010,ko00040,ko00561,ko00930,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00040,map00561,map00930,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko00002,ko01000,ko04147	L-arabinose catabolic process
PCFPDMBM_02579	4.42e-187	ycjP	-	-	P	ko:K02026	-	ko00000,ko00002,ko02000	ABC transporter (permease)
PCFPDMBM_02580	1.9e-199	ycjO	-	-	P	ko:K02025	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PCFPDMBM_02581	5.75e-286	ycjN	-	-	G	ko:K02027	-	ko00000,ko00002,ko02000	Sugar ABC transporter substrate-binding protein
PCFPDMBM_02582	0.0	ycjM	2.4.1.7	GH13	G	ko:K00690	ko00500,map00500	ko00000,ko00001,ko01000	Alpha amylase catalytic
PCFPDMBM_02583	1.98e-40	pspD	-	-	S	ko:K03971	-	ko00000	Phage Shock Protein
PCFPDMBM_02584	1.88e-68	pspC	-	-	KT	ko:K03973	-	ko00000,ko02048,ko03000	phage shock protein C
PCFPDMBM_02585	4.45e-42	pspB	-	-	S	ko:K03970	-	ko00000,ko02048	Phage shock protein B
PCFPDMBM_02586	1.1e-133	pspA	-	-	KT	ko:K03969	-	ko00000	Phage shock protein A
PCFPDMBM_02587	1.09e-213	pspF	-	-	K	ko:K03974	-	ko00000,ko03000	transcriptional activator
PCFPDMBM_02588	0.0	sapA	-	-	E	ko:K19226	ko01503,ko02010,map01503,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
PCFPDMBM_02589	2.96e-217	sapB	-	-	P	ko:K19227	ko01503,ko02010,map01503,map02010	ko00000,ko00001,ko00002,ko02000	peptide transport system, permease
PCFPDMBM_02590	6.86e-199	sapC	-	-	V	ko:K19228	ko01503,ko02010,map01503,map02010	ko00000,ko00001,ko00002,ko02000	peptide transport system, permease
PCFPDMBM_02591	9.92e-241	sapD	-	-	P	ko:K02031,ko:K02032,ko:K13892,ko:K13896,ko:K19229,ko:K19230	ko01503,ko02010,ko02024,map01503,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
PCFPDMBM_02592	3.12e-181	sapF	-	-	P	ko:K02031,ko:K02032,ko:K13892,ko:K13896,ko:K19229,ko:K19230	ko01503,ko02010,ko02024,map01503,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
PCFPDMBM_02593	3.96e-181	fabI	1.3.1.10, 1.3.1.9	-	I	ko:K00208	ko00061,ko00333,ko00780,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Enoyl- acyl-carrier-protein reductase NADH
PCFPDMBM_02594	6.26e-211	yciW	-	-	S	-	-	-	protein conserved in bacteria
PCFPDMBM_02595	0.0	rnb	3.1.13.1	-	J	ko:K01147	-	ko00000,ko01000,ko03016	Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction
PCFPDMBM_02596	0.0	gmr	3.1.4.52	-	T	ko:K14051	ko02024,ko02026,map02024,map02026	ko00000,ko00001,ko01000	Diguanylate cyclase
PCFPDMBM_02597	5.99e-210	rpfF	-	-	I	ko:K13816	ko02020,ko02024,map02020,map02024	ko00000,ko00001	Enoyl-CoA hydratase
PCFPDMBM_02598	1.48e-25	yciZ	-	-	S	-	-	-	Belongs to the UPF0509 family
PCFPDMBM_02599	1.17e-158	yciT	-	-	K	-	-	-	transcriptional regulator
PCFPDMBM_02600	3.08e-32	osmB	-	-	M	ko:K04062	-	ko00000	Lipoprotein
PCFPDMBM_02601	3.43e-66	yciH	-	-	J	ko:K03113	ko03013,map03013	ko00000,ko00001,ko03012	Translation Initiation Factor
PCFPDMBM_02602	4.74e-160	pyrF	4.1.1.23	-	F	ko:K01591	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
PCFPDMBM_02603	1.74e-273	lapB	-	-	G	ko:K19804	-	ko00000	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
PCFPDMBM_02604	3.27e-59	lapA	-	-	S	ko:K08992	-	ko00000	Involved in the assembly of lipopolysaccharide (LPS)
PCFPDMBM_02605	1.57e-183	pgpB	3.1.3.27, 3.1.3.4, 3.1.3.81, 3.6.1.27	-	I	ko:K01096	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	phosphatidylglycerophosphatase
PCFPDMBM_02606	3.9e-137	ribA	3.5.4.25	-	F	ko:K01497	ko00740,ko00790,ko01100,ko01110,ko02024,map00740,map00790,map01100,map01110,map02024	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate
PCFPDMBM_02607	0.0	acnA	4.2.1.3	-	C	ko:K01681	ko00020,ko00630,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
PCFPDMBM_02608	5.25e-233	cysB	-	-	K	ko:K13634	-	ko00000,ko03000	transcriptional regulator
PCFPDMBM_02609	0.0	topA	5.99.1.2	-	L	ko:K03168	-	ko00000,ko01000,ko03032,ko03400	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
PCFPDMBM_02610	6.87e-50	yciN	-	-	S	-	-	-	Protein of unknown function (DUF2498)
PCFPDMBM_02611	1.11e-221	sohB	-	-	OU	ko:K04774	-	ko00000,ko01000,ko01002	peptidase
PCFPDMBM_02612	1.67e-173	yciK	-	-	IQ	-	-	-	COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PCFPDMBM_02613	2.43e-131	btuR	2.5.1.17	-	H	ko:K19221	ko00860,ko01100,map00860,map01100	ko00000,ko00001,ko00002,ko01000	Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids
PCFPDMBM_02614	1.77e-201	rluB	5.4.99.22	-	J	ko:K06178	-	ko00000,ko01000,ko03009	Belongs to the pseudouridine synthase RsuA family
PCFPDMBM_02615	3.78e-112	-	-	-	S	ko:K11903	ko02025,ko03070,map02025,map03070	ko00000,ko00001,ko00002,ko02044	Type VI secretion system effector
PCFPDMBM_02616	3.24e-102	-	-	-	S	-	-	-	Protein of unknown function (DUF2778)
PCFPDMBM_02617	3.59e-147	yciO	-	-	J	-	-	-	Belongs to the SUA5 family
PCFPDMBM_02618	2.96e-199	trpH	3.1.3.97	-	S	ko:K07053	-	ko00000,ko01000	Metal-dependent phosphoesterases (PHP family)
PCFPDMBM_02619	0.0	trpE	4.1.3.27	-	H	ko:K01657,ko:K13503	ko00400,ko00405,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00400,map00405,map01100,map01110,map01130,map01230,map02024,map02025	ko00000,ko00001,ko00002,ko01000	Anthranilate synthase component
PCFPDMBM_02620	0.0	trpD	2.4.2.18, 4.1.3.27	-	F	ko:K00766,ko:K13497	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
PCFPDMBM_02621	7.35e-307	trpC	4.1.1.48, 5.3.1.24	-	E	ko:K13498	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the TrpC family
PCFPDMBM_02622	1.08e-287	trpB	4.2.1.20	-	E	ko:K01696	ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
PCFPDMBM_02623	1.37e-180	trpA	4.2.1.20	-	E	ko:K01695	ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
PCFPDMBM_02624	5.38e-291	yedE	-	-	S	ko:K07112	-	ko00000	transporter component
PCFPDMBM_02625	4.47e-50	yedF	-	-	O	-	-	-	Sulfurtransferase TusA
PCFPDMBM_02626	1.43e-52	-	-	-	S	-	-	-	Bacterial protein of unknown function (DUF883)
PCFPDMBM_02628	2.18e-61	-	-	-	-	ko:K03503	-	ko00000,ko01000,ko01002,ko03400	-
PCFPDMBM_02629	7.11e-30	-	-	-	-	-	-	-	-
PCFPDMBM_02630	6.84e-48	-	-	-	S	-	-	-	peptidoglycan catabolic process
PCFPDMBM_02632	6.4e-77	-	-	-	NT	ko:K02067,ko:K03406	ko02010,ko02020,ko02030,map02010,map02020,map02030	ko00000,ko00001,ko00002,ko02000,ko02035	transmembrane signaling receptor activity
PCFPDMBM_02633	0.0	-	-	-	NT	-	-	-	Phage-related protein, tail component
PCFPDMBM_02634	1.59e-99	-	-	-	S	-	-	-	Corresponds to locus_tag
PCFPDMBM_02635	3.77e-138	-	-	-	S	-	-	-	peptidoglycan catabolic process
PCFPDMBM_02636	1.85e-157	-	-	-	S	-	-	-	TIGRFAM phage minor tail protein L
PCFPDMBM_02637	2.37e-68	-	-	-	S	-	-	-	Phage minor tail protein
PCFPDMBM_02638	0.0	-	-	-	S	-	-	-	peptidoglycan catabolic process
PCFPDMBM_02639	8.53e-51	GJ12_01675	-	-	S	-	-	-	phage tail assembly protein T
PCFPDMBM_02640	1.09e-65	-	-	-	S	-	-	-	Pfam:Phage_TAC_2
PCFPDMBM_02641	1.05e-147	-	-	-	S	-	-	-	peptidase activity
PCFPDMBM_02642	1.62e-64	-	-	-	S	-	-	-	Phage minor tail protein U
PCFPDMBM_02643	2.5e-93	JD73_18875	-	-	S	-	-	-	prophage
PCFPDMBM_02644	1.36e-37	-	-	-	S	-	-	-	ATP-binding sugar transporter from pro-phage
PCFPDMBM_02645	4.27e-46	-	-	-	S	-	-	-	Uncharacterized conserved protein (DUF2190)
PCFPDMBM_02646	0.0	clpP_2	-	-	E	-	-	-	Clp protease
PCFPDMBM_02647	2.06e-285	-	-	-	S	-	-	-	portal protein
PCFPDMBM_02648	1.23e-32	-	-	-	-	-	-	-	-
PCFPDMBM_02649	0.0	-	-	-	S	-	-	-	Phage terminase large subunit (GpA)
PCFPDMBM_02650	4.41e-91	-	-	-	S	-	-	-	Protein of unknown function (DUF1441)
PCFPDMBM_02652	2.19e-08	gvpU	-	-	S	-	-	-	gas vesicle protein
PCFPDMBM_02653	1.79e-65	-	-	-	-	-	-	-	-
PCFPDMBM_02654	2.35e-117	ybcS	3.2.1.17	-	G	ko:K01185	-	ko00000,ko01000	lysozyme
PCFPDMBM_02655	7.33e-50	essD	-	-	S	-	-	-	Bacteriophage P21 holin S
PCFPDMBM_02656	6.92e-106	-	-	-	OU	-	-	-	Serine dehydrogenase proteinase
PCFPDMBM_02657	4.3e-133	-	-	-	-	-	-	-	-
PCFPDMBM_02658	3.46e-213	ydfU	-	-	V	-	-	-	Protein of unknown function (DUF968)
PCFPDMBM_02659	3.15e-78	-	-	-	L	-	-	-	endodeoxyribonuclease RusA
PCFPDMBM_02660	8.82e-21	-	-	-	-	-	-	-	-
PCFPDMBM_02661	5.05e-47	dinI	-	-	S	ko:K12149	-	ko00000,ko03400	damage-inducible protein I
PCFPDMBM_02662	6.62e-50	-	-	-	-	-	-	-	-
PCFPDMBM_02663	6.58e-148	-	-	-	L	-	-	-	DNA methylase
PCFPDMBM_02664	5.01e-28	-	-	-	-	-	-	-	-
PCFPDMBM_02665	1.45e-55	-	-	-	GK	-	-	-	Bacterial protein of unknown function (DUF977)
PCFPDMBM_02666	5.46e-89	-	-	-	K	-	-	-	PerC transcriptional activator
PCFPDMBM_02667	4.94e-101	-	-	-	S	-	-	-	Replication protein P
PCFPDMBM_02668	1.98e-106	-	-	-	S	-	-	-	Putative bacterial toxin ydaT
PCFPDMBM_02669	1.11e-22	-	-	-	K	ko:K07729	-	ko00000,ko03000	Helix-turn-helix XRE-family like proteins
PCFPDMBM_02670	3.02e-12	-	-	-	-	-	-	-	-
PCFPDMBM_02672	2.75e-63	-	-	-	K	ko:K13643	-	ko00000,ko03000	Transcriptional regulator
PCFPDMBM_02673	0.0	-	-	-	L	ko:K10906	-	ko00000,ko01000,ko03400	3' exoribonuclease, RNase T-like
PCFPDMBM_02674	1.96e-187	intE	-	-	L	ko:K21039	-	ko00000,ko01000	Belongs to the 'phage' integrase family
PCFPDMBM_02675	2.42e-147	ompW	-	-	M	ko:K07275	-	ko00000	outer membrane protein W
PCFPDMBM_02676	1.55e-150	yciC	-	-	S	-	-	-	UPF0259 membrane protein
PCFPDMBM_02677	3.02e-119	ispZ	-	-	D	ko:K06190	-	ko00000	probably involved in intracellular septation
PCFPDMBM_02678	1.01e-87	yciA	-	-	I	ko:K10806	ko01040,map01040	ko00000,ko00001,ko01000,ko01004	Thioesterase superfamily
PCFPDMBM_02679	2.77e-112	tonB	-	-	M	ko:K03832	-	ko00000,ko02000	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
PCFPDMBM_02680	5.33e-63	yciI	-	-	T	ko:K05527,ko:K09780	-	ko00000,ko03000	YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase, but does not seem to catalyze any of the
PCFPDMBM_02681	2.22e-133	leuE	-	-	E	ko:K11250	-	ko00000,ko02000	Efflux Protein
PCFPDMBM_02682	5.11e-27	-	-	-	-	-	-	-	-
PCFPDMBM_02683	0.0	cls	-	-	I	ko:K06131	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PCFPDMBM_02684	2.21e-76	yciU	-	-	S	ko:K09901	-	ko00000	Belongs to the UPF0263 family
PCFPDMBM_02685	7.83e-240	oppF	-	-	P	ko:K10823,ko:K12372	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
PCFPDMBM_02686	9.74e-231	oppD	-	-	P	ko:K02031,ko:K12371,ko:K15583	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
PCFPDMBM_02687	2.2e-198	oppC	-	-	P	ko:K15582	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	COG1173 ABC-type dipeptide oligopeptide nickel transport systems permease components
PCFPDMBM_02688	8.74e-207	oppB	-	-	P	ko:K15581	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC-type dipeptide oligopeptide nickel transport systems, permease components
PCFPDMBM_02689	0.0	oppA	-	-	E	ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
PCFPDMBM_02691	1.49e-139	ychE	-	-	U	ko:K05595	-	ko00000,ko02000	UPF0056 membrane protein
PCFPDMBM_02692	0.0	adhE	1.1.1.1, 1.2.1.10	-	C	ko:K04072	ko00010,ko00071,ko00350,ko00620,ko00625,ko00626,ko00650,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00620,map00625,map00626,map00650,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	belongs to the iron- containing alcohol dehydrogenase family
PCFPDMBM_02693	3.46e-132	tdk	2.7.1.21	-	F	ko:K00857	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	thymidine kinase
PCFPDMBM_02694	4.52e-87	hns	-	-	K	ko:K03746,ko:K11685	-	ko00000,ko03036,ko03400	Belongs to the histone-like protein H-NS family
PCFPDMBM_02695	1.21e-211	galU	2.7.7.9	-	M	ko:K00963	ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	Utp--glucose-1-phosphate uridylyltransferase
PCFPDMBM_02696	7.34e-226	rssB	3.1.3.3	-	KT	ko:K02485,ko:K07315	-	ko00000,ko01000,ko02022,ko03021	Regulates the turnover of the sigma S factor (RpoS) by promoting its proteolysis in exponentially growing cells. Acts by binding and delivering RpoS to the ClpXP protease. RssB is not co- degraded with RpoS, but is released from the complex and can initiate a new cycle of RpoS recognition and degradation
PCFPDMBM_02697	1.36e-193	rssA	-	-	S	ko:K07001	-	ko00000	Patatin-like phospholipase
PCFPDMBM_02698	3.07e-203	purU	3.5.1.10	-	F	ko:K01433	ko00630,ko00670,map00630,map00670	ko00000,ko00001,ko01000	Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4)
PCFPDMBM_02701	2.64e-93	lrpC	-	-	K	ko:K03719	-	ko00000,ko03000,ko03036	AsnC family transcriptional regulator
PCFPDMBM_02702	1.78e-177	-	-	-	EG	-	-	-	EamA-like transporter family
PCFPDMBM_02703	4.65e-157	narI	1.7.5.1	-	C	ko:K00374	ko00910,ko01120,ko02020,map00910,map01120,map02020	ko00000,ko00001,ko00002,ko01000	nitrate reductase, gamma subunit
PCFPDMBM_02704	7.62e-157	narJ	-	-	C	ko:K00373	ko02020,map02020	ko00000,ko00001	nitrate reductase molybdenum cofactor assembly chaperone
PCFPDMBM_02705	0.0	narH	1.7.5.1	-	C	ko:K00371	ko00910,ko01120,ko02020,map00910,map01120,map02020	ko00000,ko00001,ko00002,ko01000	nitrate reductase beta subunit
PCFPDMBM_02706	0.0	narG	1.7.5.1	-	C	ko:K00370	ko00910,ko01120,ko02020,map00910,map01120,map02020	ko00000,ko00001,ko00002,ko01000	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
PCFPDMBM_02707	0.0	narK	-	-	P	ko:K02575	ko00910,map00910	ko00000,ko00001,ko00002,ko02000	nitrate nitrite transporter
PCFPDMBM_02708	0.0	narX	2.7.13.3	-	T	ko:K07673,ko:K07674	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
PCFPDMBM_02709	3.02e-144	narL	-	-	K	ko:K07684	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	response regulator
PCFPDMBM_02710	2.72e-296	ychO	-	-	M	ko:K13735	ko05100,map05100	ko00000,ko00001	entry into host
PCFPDMBM_02711	0.0	nasA	-	-	C	ko:K00372	ko00910,ko01120,map00910,map01120	ko00000,ko00001,ko00002,ko01000	Catalytic subunit of the nitrate reductase (NAP). Only expressed at high levels during aerobic growth. NapAB complex receives electrons from the membrane-anchored tetraheme protein NapC. Essential function for nitrate assimilation and may have a role in anaerobic metabolism
PCFPDMBM_02712	0.0	nirB	1.7.1.15	-	C	ko:K00362	ko00910,ko01120,map00910,map01120	ko00000,ko00001,ko00002,ko01000	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
PCFPDMBM_02713	2.39e-182	nasD	-	-	P	ko:K15578	ko00910,ko02010,map00910,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	(ABC) transporter
PCFPDMBM_02714	3.15e-196	ntrB	-	-	P	ko:K15577	ko00910,ko02010,map00910,map02010	ko00000,ko00001,ko00002,ko02000	ABC-type nitrate sulfonate bicarbonate transport system permease component
PCFPDMBM_02715	1.99e-299	nasS	-	-	P	ko:K15576,ko:K22067	ko00910,ko02010,map00910,map02010	ko00000,ko00001,ko00002,ko02000,ko02022	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
PCFPDMBM_02716	1.3e-181	nasR	-	-	K	-	-	-	ANTAR
PCFPDMBM_02717	1.9e-74	ychN	-	-	P	ko:K06039	-	ko00000	conserved protein involved in intracellular sulfur reduction
PCFPDMBM_02718	0.0	cheD2	-	-	NT	ko:K03406	ko02020,ko02030,map02020,map02030	ko00000,ko00001,ko02035	chemotaxis, protein
PCFPDMBM_02719	3.33e-51	-	-	-	S	-	-	-	Protein involved in biological_process
PCFPDMBM_02720	2.05e-163	chaC	-	-	P	ko:K07232	-	ko00000	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
PCFPDMBM_02721	3.31e-47	chaB	-	-	K	ko:K06197	-	ko00000	Might be a regulator of the sodium-potassium proton antiporter ChaA
PCFPDMBM_02722	2.69e-238	chaA	-	-	P	ko:K07300	-	ko00000,ko02000	Calcium Proton
PCFPDMBM_02723	1.64e-200	-	-	-	M	-	-	-	2-dehydro-3-deoxyphosphooctonate aldolase
PCFPDMBM_02724	3.86e-196	ychA	-	-	S	-	-	-	Transglutaminase-like superfamily
PCFPDMBM_02725	1.43e-82	sirB2	-	-	S	-	-	-	Invasion gene expression up-regulator SirB
PCFPDMBM_02726	9.95e-180	prmC	2.1.1.297	-	J	ko:K02493	-	ko00000,ko01000,ko03012	Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
PCFPDMBM_02727	1.88e-251	prfA	-	-	J	ko:K02835	-	ko00000,ko03012	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
PCFPDMBM_02728	3.21e-286	hemA	1.2.1.70	-	H	ko:K02492	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
PCFPDMBM_02729	2.42e-139	lolB	-	-	M	ko:K02494	-	ko00000	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
PCFPDMBM_02730	3.99e-199	ispE	2.7.1.148	-	F	ko:K00919	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
PCFPDMBM_02731	2.88e-221	prs	2.7.6.1	-	F	ko:K00948	ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PCFPDMBM_02732	0.0	ychM	-	-	P	ko:K03321	-	ko00000,ko02000	COG0659 Sulfate permease and related transporters (MFS superfamily)
PCFPDMBM_02733	2.77e-188	mta_1	-	-	K	-	-	-	helix_turn_helix, mercury resistance
PCFPDMBM_02734	1.72e-58	ychH	-	-	S	-	-	-	Protein of unknown function (DUF2583)
PCFPDMBM_02735	3.49e-139	pth	3.1.1.29	-	J	ko:K01056	-	ko00000,ko01000,ko03012	The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
PCFPDMBM_02736	1.51e-259	ychF	-	-	J	ko:K06942	-	ko00000,ko03009	ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
PCFPDMBM_02737	2.78e-212	ftrA	-	-	K	ko:K13633	-	ko00000,ko03000	Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain
PCFPDMBM_02738	9.68e-86	-	-	-	P	-	-	-	Rhodanese
PCFPDMBM_02739	1.15e-314	fcy21	-	-	U	ko:K03457	-	ko00000	Belongs to the purine-cytosine permease (2.A.39) family
PCFPDMBM_02740	0.0	ydeP	-	-	C	-	-	-	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
PCFPDMBM_02741	2.01e-79	yybH	-	-	S	-	-	-	SnoaL-like domain
PCFPDMBM_02742	1.15e-89	-	-	-	-	-	-	-	-
PCFPDMBM_02743	5.91e-53	-	-	-	S	-	-	-	branched-chain amino acid
PCFPDMBM_02744	1.82e-136	ygaZ	-	-	E	-	-	-	branched-chain amino acid
PCFPDMBM_02745	8.23e-50	-	-	-	S	-	-	-	Fusaric acid resistance protein-like
PCFPDMBM_02746	2.28e-219	catA	1.13.11.1	-	Q	ko:K03381	ko00361,ko00362,ko00364,ko00623,ko01100,ko01120,ko01220,map00361,map00362,map00364,map00623,map01100,map01120,map01220	ko00000,ko00001,ko00002,ko01000	catechol 1,2-dioxygenase
PCFPDMBM_02747	4.68e-60	catC	5.3.3.4	-	Q	ko:K03464	ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220	ko00000,ko00001,ko00002,ko01000	muconolactone delta-isomerase
PCFPDMBM_02748	3.33e-246	catB	5.5.1.1	-	M	ko:K01856	ko00361,ko00362,ko00364,ko00623,ko01100,ko01120,ko01220,map00361,map00362,map00364,map00623,map01100,map01120,map01220	ko00000,ko00001,ko00002,ko01000	Belongs to the mandelate racemase muconate lactonizing enzyme family
PCFPDMBM_02749	7.38e-147	pcaD	3.1.1.24	-	I	ko:K01055	ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220	ko00000,ko00001,ko00002,ko01000	3-oxoadipate enol-lactonase
PCFPDMBM_02750	6.88e-152	pcaJ	2.8.3.6	-	I	ko:K01032	ko00362,ko01100,ko01120,map00362,map01100,map01120	ko00000,ko00001,ko01000	COG2057 Acyl CoA acetate 3-ketoacid CoA transferase, beta subunit
PCFPDMBM_02751	2.56e-151	pcaI	2.8.3.5, 2.8.3.6	-	I	ko:K01027,ko:K01031	ko00072,ko00280,ko00362,ko00650,ko01100,ko01120,map00072,map00280,map00362,map00650,map01100,map01120	ko00000,ko00001,ko01000	COG1788 Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
PCFPDMBM_02752	1.69e-297	shiA	-	-	EGP	-	-	-	Major facilitator superfamily
PCFPDMBM_02753	1.37e-110	hpaC	-	-	S	ko:K09024	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	Flavin reductase
PCFPDMBM_02754	2.74e-173	-	-	-	C	ko:K03863	ko00627,ko01120,map00627,map01120	ko00000,ko00001	Flavodoxin reductases (Ferredoxin-NADPH reductases) family 1
PCFPDMBM_02755	9.06e-154	-	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	reductase
PCFPDMBM_02756	3.25e-107	-	-	-	Q	-	-	-	Aromatic-ring-hydroxylating dioxygenase
PCFPDMBM_02757	9.51e-317	antA	1.14.13.172	-	P	ko:K18242	ko00626,ko01120,map00626,map01120	br01602,ko00000,ko00001,ko00002,ko01000	Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases large terminal subunit
PCFPDMBM_02758	1.45e-108	-	-	-	S	-	-	-	SnoaL-like domain
PCFPDMBM_02759	1.62e-80	-	-	-	-	-	-	-	-
PCFPDMBM_02760	3.05e-260	-	1.14.13.235	-	I	ko:K22027	-	ko00000,ko01000	acyl-CoA dehydrogenase
PCFPDMBM_02761	1.66e-213	-	3.5.1.4	-	J	ko:K01426	ko00330,ko00360,ko00380,ko00627,ko00643,ko01120,map00330,map00360,map00380,map00627,map00643,map01120	ko00000,ko00001,ko01000	Belongs to the amidase family
PCFPDMBM_02762	7.71e-94	-	-	-	K	-	-	-	transcriptional regulator
PCFPDMBM_02763	2.49e-300	hpaX	-	-	G	ko:K02511	-	ko00000,ko02000	Major facilitator superfamily
PCFPDMBM_02765	2.73e-161	-	-	-	S	-	-	-	phage-encoded protein
PCFPDMBM_02766	1.34e-196	-	-	-	S	-	-	-	Zn-dependent hydrolases, including glyoxylases
PCFPDMBM_02767	1.6e-177	-	-	-	S	-	-	-	Protein of unknown function (DUF1264)
PCFPDMBM_02768	5.67e-268	rafY	-	-	S	-	-	-	Porin-like glycoporin RafY
PCFPDMBM_02769	1.31e-277	-	-	-	G	ko:K03292	-	ko00000	COG2211 Na melibiose symporter and related transporters
PCFPDMBM_02771	0.0	treA	3.2.1.28	GH37	G	ko:K01194	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko00537,ko01000	Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system
PCFPDMBM_02772	1.01e-47	ymgE	-	-	S	-	-	-	transglycosylase associated protein
PCFPDMBM_02773	2.01e-160	ycgR	-	-	M	ko:K21087	ko02026,map02026	ko00000,ko00001	Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility
PCFPDMBM_02774	5.75e-147	emtA	-	GH23	M	ko:K08308	-	ko00000,ko01000,ko01011	Murein-degrading enzyme. May play a role in recycling of muropeptides during cell elongation and or cell division. Preferentially cleaves at a distance of more than two disaccharide units from the ends of the glycan chain
PCFPDMBM_02775	1.62e-201	ldcA	3.4.17.13	-	V	ko:K01297	-	ko00000,ko01000,ko01002,ko01011	proteins, homologs of microcin C7 resistance protein MccF
PCFPDMBM_02776	0.0	nhaP2	-	-	P	ko:K11105	-	ko00000,ko02000	K( ) H( ) antiporter that extrudes potassium in exchange for external protons and maintains the internal concentration of potassium under toxic levels
PCFPDMBM_02777	1.96e-251	dadX	5.1.1.1	-	E	ko:K01775	ko00473,ko01100,ko01502,map00473,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
PCFPDMBM_02778	0.0	dadA	1.4.5.1	-	E	ko:K00285	ko00360,map00360	ko00000,ko00001,ko01000	Oxidative deamination of D-amino acids
PCFPDMBM_02779	0.0	ycgB	-	-	S	ko:K06415	-	ko00000	SpoVR family
PCFPDMBM_02780	5.23e-170	fadR	-	-	K	ko:K03603	-	ko00000,ko03000	Multifunctional regulator of fatty acid metabolism
PCFPDMBM_02781	1.6e-313	nhaB	-	-	P	ko:K03314	-	ko00000,ko02000	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
PCFPDMBM_02782	9.08e-124	dsbB	-	-	O	ko:K03611	-	ko00000,ko03110	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
PCFPDMBM_02783	9.97e-109	ycgN	-	-	S	ko:K09160	-	ko00000	Belongs to the UPF0260 family
PCFPDMBM_02784	3.29e-154	ycgM	-	-	Q	-	-	-	COG0179 2-keto-4-pentenoate hydratase 2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)
PCFPDMBM_02785	5.78e-57	ycgL	-	-	S	ko:K09902	-	ko00000	YcgL domain-containing protein
PCFPDMBM_02786	1.54e-153	minC	-	-	D	ko:K03610	-	ko00000,ko03036,ko04812	Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization
PCFPDMBM_02787	4.82e-186	minD	-	-	D	ko:K03609	-	ko00000,ko03036,ko04812	Belongs to the ParA family
PCFPDMBM_02788	8.01e-54	minE	-	-	D	ko:K03608	-	ko00000,ko03036,ko04812	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
PCFPDMBM_02789	1.05e-266	rnd	3.1.13.5	-	J	ko:K03684	-	ko00000,ko01000,ko03016	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
PCFPDMBM_02790	0.0	fadD	6.2.1.3	-	IQ	ko:K01897	ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920	ko00000,ko00001,ko00002,ko01000,ko01004,ko04147	AMP-binding enzyme C-terminal domain
PCFPDMBM_02791	1e-111	slp	-	-	M	ko:K07285	-	ko00000	Outer Membrane Lipoprotein
PCFPDMBM_02792	7.27e-148	yeaZ	-	-	O	ko:K14742	-	ko00000,ko03016	PFAM Peptidase M22, glycoprotease
PCFPDMBM_02793	0.0	yoaA	3.6.4.12	-	KL	ko:K03722	-	ko00000,ko01000,ko03400	helicase
PCFPDMBM_02794	8.84e-74	yoaB	-	-	J	-	-	-	Translation Initiation Inhibitor YjgF Family
PCFPDMBM_02795	1.65e-31	yoaH	-	-	S	ko:K09917	-	ko00000	Belongs to the UPF0181 family
PCFPDMBM_02796	9.21e-307	pabB	2.6.1.85	-	EH	ko:K01665	ko00790,map00790	ko00000,ko00001,ko01000	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
PCFPDMBM_02797	9.55e-127	nudL	-	-	L	-	-	-	NUDIX hydrolase
PCFPDMBM_02798	0.0	sdaA	4.3.1.17	-	E	ko:K01752	ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230	ko00000,ko00001,ko01000	PFAM Serine dehydratase alpha chain
PCFPDMBM_02799	0.0	adrB	3.1.4.52	-	T	ko:K21090	ko02026,map02026	ko00000,ko00001,ko01000	EAL domain
PCFPDMBM_02800	0.0	yoaE	-	-	P	-	-	-	membrane protein, terc
PCFPDMBM_02801	1.26e-201	manX	2.7.1.191	-	G	ko:K02793,ko:K02794	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system sorbose subfamily IIB component
PCFPDMBM_02802	1.11e-168	manY	-	-	G	ko:K02746,ko:K02795	ko00051,ko00052,ko00520,ko01100,ko02060,map00051,map00052,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	pts system
PCFPDMBM_02803	8.4e-198	manZ	-	-	G	ko:K02796	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	PTS system mannose fructose sorbose family IID component
PCFPDMBM_02804	1.68e-87	yobD	-	-	S	-	-	-	UPF0266 membrane protein
PCFPDMBM_02805	5.73e-136	mntP	-	-	P	-	-	-	Probably functions as a manganese efflux pump
PCFPDMBM_02806	4.78e-182	rrmA	2.1.1.187	-	Q	ko:K00563	-	ko00000,ko01000,ko03009	Methyl-transferase
PCFPDMBM_02807	0.0	ftsI	3.4.16.4	-	M	ko:K03587	ko00550,ko01501,map00550,map01501	ko00000,ko00001,ko01000,ko01011,ko03036	Catalyzes cross-linking of the peptidoglycan cell wall at the division septum
PCFPDMBM_02808	1.61e-44	cspC	-	-	K	ko:K03704	-	ko00000,ko03000	Cold shock
PCFPDMBM_02809	1.32e-224	-	3.1.4.54	-	S	ko:K13985	ko04723,map04723	ko00000,ko00001,ko01000	Zn-dependent hydrolases of the beta-lactamase fold
PCFPDMBM_02810	2.38e-47	yebO	-	-	S	-	-	-	YebO-like protein
PCFPDMBM_02811	5.61e-45	yobH	-	-	S	-	-	-	YobH-like protein
PCFPDMBM_02812	2.12e-181	kdgR	-	-	K	ko:K19333	-	ko00000,ko03000	transcriptional regulator
PCFPDMBM_02813	1.67e-294	yebQ	-	-	EGP	ko:K08169	-	ko00000,ko02000	Major facilitator superfamily
PCFPDMBM_02814	1.37e-192	htpX	-	-	O	ko:K03799	-	ko00000,ko00002,ko01000,ko01002	Belongs to the peptidase M48B family
PCFPDMBM_02815	0.0	prc	3.4.21.102	-	M	ko:K03797	-	ko00000,ko01000,ko01002	Belongs to the peptidase S41A family
PCFPDMBM_02816	6.17e-127	proQ	-	-	T	ko:K03607	-	ko00000	RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities
PCFPDMBM_02817	4.74e-107	yebR	1.8.4.14	-	T	ko:K08968	ko00270,map00270	ko00000,ko00001,ko01000	Domain present in phytochromes and cGMP-specific phosphodiesterases.
PCFPDMBM_02818	6.9e-281	yebS	-	-	S	ko:K03808	-	ko00000	paraquat-inducible protein A
PCFPDMBM_02819	0.0	yebT	-	-	Q	ko:K06192	-	ko00000	paraquat-inducible protein b
PCFPDMBM_02820	0.0	rsmF	2.1.1.178	-	J	ko:K11392	-	ko00000,ko01000,ko03009	Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA
PCFPDMBM_02821	1.48e-50	yebV	-	-	S	-	-	-	Protein of unknown function (DUF1480)
PCFPDMBM_02822	6.92e-41	yebW	-	-	S	-	-	-	Protein of unknown function (DUF1482)
PCFPDMBM_02823	2.67e-137	pphA	3.1.3.16	-	T	ko:K07313	-	ko00000,ko01000	Serine Threonine protein
PCFPDMBM_02824	3.16e-193	virK	-	-	S	ko:K09824	-	ko00000	protein conserved in bacteria
PCFPDMBM_02825	7.34e-72	yebY	-	-	S	-	-	-	exported protein
PCFPDMBM_02826	4.93e-173	yebZ	-	-	P	ko:K07245	-	ko00000,ko02000	copper resistance protein
PCFPDMBM_02827	2.58e-61	yobA	-	-	S	ko:K07156	-	ko00000,ko02000	Resistance protein
PCFPDMBM_02828	3.19e-45	holE	2.7.7.7	-	L	ko:K02345	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III
PCFPDMBM_02829	1.32e-120	yobB	-	-	S	-	-	-	Protein involved in hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds and nitrogen compound metabolic process
PCFPDMBM_02830	1.25e-163	exoX	-	-	L	ko:K10857	ko03430,map03430	ko00000,ko00001,ko01000,ko03400	3'-5' exonuclease activity on single or double-strand DNA
PCFPDMBM_02831	0.0	ptrB	3.4.21.83	-	E	ko:K01354	ko05142,ko05143,map05142,map05143	ko00000,ko00001,ko01000,ko01002	Protease II
PCFPDMBM_02832	2.34e-132	yebE	-	-	S	-	-	-	protein conserved in bacteria
PCFPDMBM_02833	2.49e-65	yebF	-	-	S	-	-	-	YebF-like protein
PCFPDMBM_02834	1.78e-257	purT	2.1.2.2	-	F	ko:K08289	ko00230,ko00670,ko01100,ko01110,ko01130,map00230,map00670,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
PCFPDMBM_02835	2.14e-147	eda	4.1.2.14, 4.1.3.42	-	G	ko:K01625	ko00030,ko00630,ko01100,ko01120,ko01200,map00030,map00630,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Aldolase
PCFPDMBM_02836	0.0	edd	4.2.1.12	-	EG	ko:K01690	ko00030,ko01100,ko01120,ko01200,map00030,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Belongs to the IlvD Edd family
PCFPDMBM_02837	0.0	zwf	1.1.1.363, 1.1.1.49	-	H	ko:K00036	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,ko05230,map00030,map00480,map01100,map01110,map01120,map01130,map01200,map05230	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
PCFPDMBM_02838	2.03e-192	hexR	-	-	K	ko:K19337	-	ko00000,ko03000	transcriptional regulator
PCFPDMBM_02839	0.0	pykA	2.7.1.40	-	G	ko:K00873	ko00010,ko00230,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko04930,ko05165,ko05203,ko05230,map00010,map00230,map00620,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map04930,map05165,map05203,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Belongs to the pyruvate kinase family
PCFPDMBM_02840	3.43e-234	lpxM	2.3.1.243	-	M	ko:K02560	ko00540,ko01100,map00540,map01100	ko00000,ko00001,ko00002,ko01000,ko01005	Catalyzes the transfer of myristate from myristoyl-acyl carrier protein (ACP) to Kdo(2)-(lauroyl)-lipid IV(A) to form Kdo(2)-lipid A
PCFPDMBM_02841	1.43e-307	yebA	-	-	M	ko:K19304	-	ko00000,ko01000,ko01002,ko01011	COG0739 Membrane proteins related to metalloendopeptidases
PCFPDMBM_02842	1.13e-210	znuA	-	-	P	ko:K09815	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Zinc-uptake complex component A periplasmic
PCFPDMBM_02843	5.44e-178	znuC	-	-	P	ko:K09817	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system
PCFPDMBM_02844	1.71e-154	znuB	-	-	P	ko:K09816	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG1108 ABC-type Mn2 Zn2 transport systems permease components
PCFPDMBM_02845	8.41e-236	ruvB	3.6.4.12	-	L	ko:K03551	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
PCFPDMBM_02846	1.06e-133	ruvA	3.6.4.12	-	L	ko:K03550	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
PCFPDMBM_02847	3.56e-115	ruvC	3.1.22.4	-	L	ko:K01159	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
PCFPDMBM_02848	5.19e-169	yebC	-	-	K	-	-	-	transcriptional regulatory protein
PCFPDMBM_02849	5.78e-97	nudB	3.6.1.67	-	L	ko:K08310	ko00790,map00790	ko00000,ko00001,ko00002,ko01000	NUDIX domain
PCFPDMBM_02850	0.0	aspS	6.1.1.12	-	J	ko:K01876	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
PCFPDMBM_02851	1.59e-123	yecD	-	-	Q	-	-	-	Isochorismatase family
PCFPDMBM_02852	1.24e-16	yecE	-	-	S	-	-	-	Protein of unknown function DUF72
PCFPDMBM_02853	1.61e-44	-	-	-	S	-	-	-	DinI-like family
PCFPDMBM_02855	4.5e-79	-	-	-	S	-	-	-	N-acetylmuramoyl-L-alanine amidase activity
PCFPDMBM_02857	1.26e-74	-	-	-	NT	ko:K02067,ko:K03406	ko02010,ko02020,ko02030,map02010,map02020,map02030	ko00000,ko00001,ko00002,ko02000,ko02035	transmembrane signaling receptor activity
PCFPDMBM_02858	0.0	-	-	-	NT	-	-	-	Phage-related protein, tail component
PCFPDMBM_02861	2.88e-97	-	-	-	S	-	-	-	virus tail assembly
PCFPDMBM_02862	1.34e-175	-	-	-	M	-	-	-	JAB/MPN domain
PCFPDMBM_02863	1.43e-173	-	-	-	S	-	-	-	Phage minor tail protein L
PCFPDMBM_02864	3.11e-73	-	-	-	S	-	-	-	Phage minor tail protein
PCFPDMBM_02865	2.67e-206	-	-	-	D	-	-	-	Tail length tape measure protein
PCFPDMBM_02867	4.58e-28	-	-	-	S	-	-	-	Protein of unknown function (DUF4035)
PCFPDMBM_02868	1.02e-43	-	-	-	S	-	-	-	Phage tail assembly chaperone
PCFPDMBM_02869	1.53e-72	-	-	-	-	-	-	-	-
PCFPDMBM_02870	2.7e-68	-	-	-	S	-	-	-	Protein of unknown function (DUF3168)
PCFPDMBM_02871	2.85e-98	-	-	-	S	-	-	-	Bacteriophage HK97-gp10, putative tail-component
PCFPDMBM_02872	5.24e-29	-	-	-	S	-	-	-	Phage head-tail joining protein
PCFPDMBM_02873	1.34e-63	-	-	-	S	-	-	-	Phage gp6-like head-tail connector protein
PCFPDMBM_02874	1.38e-11	-	-	-	-	ko:K03646	-	ko00000,ko02000	-
PCFPDMBM_02875	1.26e-270	-	-	-	S	-	-	-	capsid protein
PCFPDMBM_02876	1.45e-177	-	-	-	OU	-	-	-	ATP-dependent Clp protease proteolytic subunit
PCFPDMBM_02877	2.06e-297	-	-	-	S	-	-	-	Phage portal protein, HK97 family
PCFPDMBM_02878	0.0	-	-	-	S	-	-	-	Phage Terminase
PCFPDMBM_02879	1.6e-92	-	-	-	S	-	-	-	Phage terminase, small subunit
PCFPDMBM_02881	9.15e-73	-	-	-	L	ko:K07451	-	ko00000,ko01000,ko02048	Endonuclease
PCFPDMBM_02883	1.71e-101	-	-	-	S	-	-	-	Phage regulatory protein Rha (Phage_pRha)
PCFPDMBM_02884	7.78e-37	-	-	-	-	-	-	-	-
PCFPDMBM_02885	1.56e-126	-	-	-	S	-	-	-	secretion activating protein
PCFPDMBM_02886	3.1e-13	-	-	-	S	-	-	-	Pfam:Phage_holin_3_7
PCFPDMBM_02888	5.71e-53	-	-	-	L	ko:K07497	-	ko00000	COG2801 Transposase and inactivated derivatives
PCFPDMBM_02889	7.53e-201	-	-	-	L	ko:K07497	-	ko00000	Transposase and inactivated derivatives
PCFPDMBM_02890	1.94e-35	-	-	-	-	-	-	-	-
PCFPDMBM_02892	4.91e-135	rlfA	-	-	S	-	-	-	Protein of unknown function (DUF3800)
PCFPDMBM_02893	8.92e-135	-	-	-	O	-	-	-	Antitermination protein
PCFPDMBM_02894	5.96e-35	-	-	-	S	-	-	-	sequence-specific DNA binding transcription factor activity
PCFPDMBM_02895	5.92e-197	-	-	-	S	ko:K06919	-	ko00000	Zinc-binding domain of primase-helicase
PCFPDMBM_02896	0.0	-	-	-	L	-	-	-	helicase
PCFPDMBM_02898	1.98e-29	-	-	-	KT	-	-	-	Peptidase S24-like
PCFPDMBM_02902	1.12e-54	-	-	-	-	-	-	-	-
PCFPDMBM_02903	1.29e-35	-	-	-	-	-	-	-	-
PCFPDMBM_02904	5.46e-22	-	-	-	-	-	-	-	-
PCFPDMBM_02905	5.17e-49	-	-	-	-	-	-	-	-
PCFPDMBM_02906	5.54e-184	-	-	-	S	-	-	-	ORF6N domain
PCFPDMBM_02908	4.22e-44	-	-	-	S	-	-	-	Putative excisionase (DUF1233)
PCFPDMBM_02909	1.32e-306	intR	-	-	L	ko:K14059	-	ko00000	Pfam:DUF3596
PCFPDMBM_02910	8.02e-171	yecE	-	-	S	-	-	-	Protein of unknown function DUF72
PCFPDMBM_02911	2.47e-88	yecN	-	-	S	ko:K07136	-	ko00000	relative of glutathione S-transferase, MAPEG superfamily
PCFPDMBM_02912	8.35e-175	cmoA	-	-	Q	ko:K15256	-	ko00000,ko01000,ko03016	Catalyzes the conversion of S-adenosyl-L-methionine (SAM) to carboxy-S-adenosyl-L-methionine (Cx-SAM)
PCFPDMBM_02913	4.86e-233	cmoB	-	-	J	ko:K15257	-	ko00000,ko01000,ko03016	Catalyzes carboxymethyl transfer from carboxy-S- adenosyl-L-methionine (Cx-SAM) to 5-hydroxyuridine (ho5U) to form 5-carboxymethoxyuridine (cmo5U) at position 34 in tRNAs
PCFPDMBM_02914	8.19e-162	cutC	-	-	P	ko:K06201	-	ko00000	Participates in the control of copper homeostasis
PCFPDMBM_02915	1.18e-131	yecM	-	-	S	ko:K09907	-	ko00000	protein conserved in bacteria
PCFPDMBM_02916	0.0	argS	6.1.1.19	-	J	ko:K01887	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Arginyl-tRNA synthetase
PCFPDMBM_02917	3.43e-284	yesR	3.2.1.172	GH105	S	ko:K15532	-	ko00000,ko01000	Glycosyl Hydrolase Family 88
PCFPDMBM_02918	0.0	-	-	-	G	ko:K03292,ko:K16210	-	ko00000,ko02000	Major Facilitator
PCFPDMBM_02919	3.07e-37	-	-	-	S	-	-	-	Protein of unknown function (DUF805)
PCFPDMBM_02921	1.96e-80	flhE	-	-	N	ko:K03516	-	ko00000,ko02035	Flagellar protein flhE
PCFPDMBM_02922	0.0	flhA	-	-	N	ko:K02400	ko02040,map02040	ko00000,ko00001,ko02035,ko02044	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
PCFPDMBM_02923	6.21e-265	flhB	-	-	N	ko:K02401	ko02040,map02040	ko00000,ko00001,ko02035,ko02044	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
PCFPDMBM_02924	4.12e-141	cheZ	-	-	NT	ko:K03414	ko02030,map02030	ko00000,ko00001,ko02035	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
PCFPDMBM_02925	2.8e-84	cheY	-	-	KT	ko:K03413	ko02020,ko02030,map02020,map02030	ko00000,ko00001,ko00002,ko02022,ko02035	Chemotaxis regulator that, when phosphorylated, interacts with the flagellar motor causing the flagella to spin clockwise which causes the cell to tumble
PCFPDMBM_02926	1.93e-243	cheB	3.1.1.61, 3.5.1.44	-	NT	ko:K03412	ko02020,ko02030,map02020,map02030	ko00000,ko00001,ko00002,ko01000,ko02022,ko02035	catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR
PCFPDMBM_02927	6.95e-204	cheR	2.1.1.80	-	NT	ko:K00575	ko02020,ko02030,map02020,map02030	ko00000,ko00001,ko01000,ko02035	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
PCFPDMBM_02928	1.38e-264	tap	-	-	NT	ko:K03406,ko:K05874,ko:K05875,ko:K05876,ko:K05877	ko02020,ko02030,map02020,map02030	ko00000,ko00001,ko02035	chemotaxis, protein
PCFPDMBM_02929	1.59e-291	tar	-	-	NT	ko:K03406,ko:K05874,ko:K05875,ko:K05876,ko:K05877	ko02020,ko02030,map02020,map02030	ko00000,ko00001,ko02035	chemotaxis, protein
PCFPDMBM_02930	1.53e-189	csuE	-	-	S	-	-	-	spore coat U domain protein
PCFPDMBM_02931	0.0	csuD	-	-	M	ko:K07347	ko05133,map05133	ko00000,ko00001,ko02000,ko02035,ko02044	Fimbrial biogenesis outer membrane usher protein
PCFPDMBM_02932	9.37e-142	csuC	-	-	M	ko:K07346	-	ko00000,ko02035,ko02044,ko03110	chaperone
PCFPDMBM_02933	8.37e-91	csuB	-	-	S	-	-	-	Spore Coat Protein U domain
PCFPDMBM_02934	2.21e-110	csuA	-	-	S	-	-	-	spore coat U domain protein
PCFPDMBM_02935	5.74e-109	cheW	-	-	NT	ko:K03408	ko02020,ko02030,map02020,map02030	ko00000,ko00001,ko02035	chemotaxis signal transduction protein
PCFPDMBM_02936	0.0	cheA	2.7.13.3	-	T	ko:K03407	ko02020,ko02030,map02020,map02030	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022,ko02035	COG0643 Chemotaxis protein histidine kinase and related kinases
PCFPDMBM_02937	4.56e-215	motB	-	-	N	ko:K02557	ko02030,ko02040,map02030,map02040	ko00000,ko00001,ko02000,ko02035	Flagellar Motor Protein
PCFPDMBM_02938	6.08e-197	motA	-	-	N	ko:K02556	ko02020,ko02030,ko02040,map02020,map02030,map02040	ko00000,ko00001,ko02000,ko02035	With MotB forms the ion channels that couple flagellar rotation to proton sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine
PCFPDMBM_02939	7.92e-135	flhC	-	-	K	ko:K02402	ko02020,ko02024,ko02026,ko02040,map02020,map02024,map02026,map02040	ko00000,ko00001,ko02035	Functions in complex with FlhD as a master transcriptional regulator that regulates transcription of several flagellar and non-flagellar operons by binding to their promoter region. Activates expression of class 2 flagellar genes, including fliA, which is a flagellum-specific sigma factor that turns on the class 3 genes. Also regulates genes whose products function in a variety of physiological pathways
PCFPDMBM_02940	6.93e-72	flhD	-	-	K	ko:K02403	ko02020,ko02024,ko02026,ko02040,map02020,map02024,map02026,map02040	ko00000,ko00001,ko02035	Functions in complex with FlhC as a master transcriptional regulator that regulates transcription of several flagellar and non-flagellar operons by binding to their promoter region. Activates expression of class 2 flagellar genes, including fliA, which is a flagellum-specific sigma factor that turns on the class 3 genes. Also regulates genes whose products function in a variety of physiological pathways
PCFPDMBM_02941	8.94e-85	uspC	-	-	T	ko:K14064	-	ko00000	Required for resistance to DNA-damaging agents
PCFPDMBM_02942	0.0	otsA	2.4.1.15, 2.4.1.347	GT20	G	ko:K00697	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000,ko01003	Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor
PCFPDMBM_02943	2.56e-180	otsB	3.1.3.12	-	G	ko:K01087	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	Removes the phosphate from trehalose 6-phosphate to produce free trehalose
PCFPDMBM_02944	1.9e-211	araH	-	-	G	ko:K10440,ko:K10538	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
PCFPDMBM_02945	0.0	araG	3.6.3.17	-	P	ko:K10441,ko:K10539	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex AraFGH involved in arabinose import. Responsible for energy coupling to the transport system
PCFPDMBM_02946	2.32e-234	araF	-	-	G	ko:K10537	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	l-arabinose-binding periplasmic protein
PCFPDMBM_02947	1.36e-118	yajL_1	-	-	S	-	-	-	Thij pfpi
PCFPDMBM_02948	1.82e-101	ftnB	-	-	P	ko:K02255	-	ko00000	Iron-storage protein
PCFPDMBM_02949	6.62e-48	yecJ	-	-	S	-	-	-	Protein of unknown function (DUF2766)
PCFPDMBM_02950	3.38e-309	hsrA_1	-	-	EGP	-	-	-	Major facilitator superfamily
PCFPDMBM_02951	5.28e-152	Z012_03465	5.3.1.26, 5.3.1.6	-	G	ko:K01808,ko:K01819	ko00030,ko00051,ko00052,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00051,map00052,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	isomerase
PCFPDMBM_02952	4.42e-55	yecR	-	-	S	-	-	-	YecR-like lipoprotein
PCFPDMBM_02953	2.18e-112	ftnA	1.16.3.2	-	P	ko:K02217	-	ko00000,ko01000	Iron-storage protein
PCFPDMBM_02954	2.68e-43	yecH	-	-	S	-	-	-	Protein of unknown function (DUF2492)
PCFPDMBM_02955	6.5e-71	-	-	-	-	-	-	-	-
PCFPDMBM_02956	1.17e-269	tyrP	-	-	E	ko:K03834	-	ko00000,ko02000	amino acid
PCFPDMBM_02957	1.2e-162	yecA	-	-	C	ko:K07039	-	ko00000	Belongs to the UPF0149 family
PCFPDMBM_02958	1.21e-265	livJ	-	-	E	ko:K01999	ko02010,ko02024,map02010,map02024	ko00000,ko00001,ko00002,ko02000	With LivFGHM is involved in the high affinity leucine transport
PCFPDMBM_02959	2.22e-204	livH	-	-	E	ko:K01997	ko02010,ko02024,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
PCFPDMBM_02960	2.38e-291	braE	-	-	U	ko:K01998	ko02010,ko02024,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
PCFPDMBM_02961	3.72e-205	livG	-	-	E	ko:K01995	ko02010,ko02024,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Part of the ABC transporter complexes LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids
PCFPDMBM_02962	1.33e-157	livF	-	-	P	ko:K01996	ko02010,ko02024,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Branched-chain amino acid transport
PCFPDMBM_02963	0.0	-	-	-	S	ko:K19353	ko00540,map00540	ko00000,ko00001,ko01000,ko01005	membrane-associated metal-dependent hydrolase
PCFPDMBM_02964	2.08e-51	-	-	-	P	ko:K08364	-	ko00000,ko02000	Heavy-metal-associated domain
PCFPDMBM_02965	1.44e-65	-	-	-	S	ko:K08363	-	ko00000,ko02000	mercuric transport protein
PCFPDMBM_02966	2.21e-274	-	-	-	E	-	-	-	Transglutaminase-like enzymes
PCFPDMBM_02967	1.08e-222	lsrB_2	-	-	G	ko:K02058	-	ko00000,ko00002,ko02000	(ABC) transporter
PCFPDMBM_02968	4.22e-316	-	3.6.3.17	-	G	ko:K02056	-	ko00000,ko00002,ko01000,ko02000	ABC transporter
PCFPDMBM_02969	1.49e-208	-	-	-	U	ko:K02057	-	ko00000,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
PCFPDMBM_02970	2.48e-193	lsrD_1	-	-	G	ko:K02057,ko:K10440	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
PCFPDMBM_02975	6.6e-129	pgsA	2.7.8.41, 2.7.8.5	-	I	ko:K00995,ko:K08744	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
PCFPDMBM_02976	0.0	uvrC	-	-	L	ko:K03703	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
PCFPDMBM_02977	2.26e-107	uvrY	-	-	K	ko:K07689	ko02020,ko02025,ko02026,ko05111,map02020,map02025,map02026,map05111	ko00000,ko00001,ko00002,ko02022	response regulator
PCFPDMBM_02978	8.65e-200	-	-	-	K	-	-	-	transcriptional regulator
PCFPDMBM_02979	6.51e-195	yhhW_1	-	-	S	ko:K06911	-	ko00000	Pirin C-terminal cupin domain
PCFPDMBM_02980	6.81e-150	slsA	-	-	Q	-	-	-	COG1335 Amidases related to nicotinamidase
PCFPDMBM_02982	5.94e-178	-	-	-	L	ko:K18320	-	ko00000	Transposase IS66 family
PCFPDMBM_02983	8.55e-64	-	-	-	L	-	-	-	IS1 transposase
PCFPDMBM_02984	2.97e-63	-	-	-	L	ko:K07480	-	ko00000	cog cog1662
PCFPDMBM_02985	5.73e-144	-	-	-	L	ko:K07497	-	ko00000	Transposase and inactivated derivatives
PCFPDMBM_02986	9.86e-54	-	-	-	L	ko:K07497	-	ko00000	Transposase
PCFPDMBM_02987	2.1e-83	-	-	-	S	-	-	-	Domain of unknown function (DUF4385)
PCFPDMBM_02988	2.23e-297	kgtP	-	-	EGP	ko:K02625,ko:K03761	-	ko00000,ko02000	transporter
PCFPDMBM_02989	1.36e-70	yfiM	-	-	S	ko:K05811	-	ko00000	Required for high salt suppression of motility
PCFPDMBM_02990	0.0	pssA	2.7.8.8	-	I	ko:K00998	ko00260,ko00564,ko01100,ko01110,map00260,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes de novo synthesis of phosphatidylserine from CDP-diacylglycerol and L-serine which leads eventually to the production of phosphatidylethanolamine
PCFPDMBM_02991	0.0	yfiQ	-	-	C	ko:K09181	-	ko00000	Acyl-CoA synthetase (NDP forming)
PCFPDMBM_02992	2.86e-150	yfiP	-	-	S	ko:K05812	-	ko00000	DTW domain containing protein
PCFPDMBM_02993	1.15e-99	trxC	1.8.1.8	-	O	ko:K03672	-	ko00000,ko01000,ko03110	Thioredoxin
PCFPDMBM_02994	2.99e-236	yfiF	-	-	J	ko:K03214	-	ko00000,ko01000,ko03009,ko03016	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PCFPDMBM_02995	2.82e-169	ung	3.2.2.27	-	L	ko:K03648	ko03410,ko05340,map03410,map05340	ko00000,ko00001,ko01000,ko03400	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
PCFPDMBM_02996	5.68e-83	grcA	-	-	S	ko:K06866	-	ko00000	Acts as a radical domain for damaged PFL and possibly other radical proteins
PCFPDMBM_02997	2.51e-284	srmB	3.6.4.13	-	JKL	ko:K05590	-	ko00000,ko01000,ko03009	DEAD-box RNA helicase involved in
PCFPDMBM_02998	3.63e-164	yfiC	2.1.1.223	-	J	ko:K15460	-	ko00000,ko01000,ko03016	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
PCFPDMBM_02999	0.0	nadB	1.4.3.16	-	H	ko:K00278	ko00250,ko00760,ko01100,map00250,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of L-aspartate to iminoaspartate
PCFPDMBM_03000	2.75e-130	rpoE	-	-	K	ko:K03088	-	ko00000,ko03021	Belongs to the sigma-70 factor family. ECF subfamily
PCFPDMBM_03001	1.41e-133	rseA	-	-	T	ko:K03597	-	ko00000,ko03021	An anti-sigma factor for extracytoplasmic function (ECF) sigma factor sigma-E (RpoE). ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut periplasmically (site-1 protease, S1P, DegS), then within the membrane itself (site-2 protease, S2P, RseP), while cytoplasmic proteases finish degrading the anti-sigma factor, liberating sigma-E
PCFPDMBM_03002	4.22e-211	rseB	-	-	T	ko:K03598	-	ko00000,ko03021	Negative regulator of sigma E activity
PCFPDMBM_03003	9.28e-97	rseC	-	-	T	ko:K03803	-	ko00000,ko03021	Positive regulator of
PCFPDMBM_03004	0.0	lepA	-	-	M	ko:K03596	ko05134,map05134	ko00000,ko00001	Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
PCFPDMBM_03005	2.83e-237	lepB	3.4.21.89	-	U	ko:K03100	ko02024,ko03060,map02024,map03060	ko00000,ko00001,ko01000,ko01002	Belongs to the peptidase S26 family
PCFPDMBM_03006	3.54e-157	rnc	3.1.26.3	-	J	ko:K03685	ko03008,ko05205,map03008,map05205	ko00000,ko00001,ko01000,ko03009,ko03019,ko03036	Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
PCFPDMBM_03007	1.48e-216	era	-	-	J	ko:K03595	-	ko00000,ko03009,ko03029	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
PCFPDMBM_03008	1.6e-148	recO	-	-	L	ko:K03584	ko03440,map03440	ko00000,ko00001,ko03400	Involved in DNA repair and RecF pathway recombination
PCFPDMBM_03009	8.08e-167	pdxJ	2.6.99.2	-	H	ko:K03474	ko00750,ko01100,map00750,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
PCFPDMBM_03010	4.51e-84	acpS	2.7.8.7	-	I	ko:K00997	ko00770,map00770	ko00000,ko00001,ko01000	Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
PCFPDMBM_03011	5.07e-60	yfhL	-	-	C	-	-	-	Ferredoxin
PCFPDMBM_03012	2.45e-185	yfhH	-	-	K	-	-	-	Transcriptional regulator
PCFPDMBM_03013	1.86e-192	murQ	4.2.1.126	-	S	ko:K07106	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate. Together with AnmK, is also required for the utilization of anhydro-N-acetylmuramic acid (anhMurNAc) either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
PCFPDMBM_03014	2.19e-291	murP	2.7.1.211	-	G	ko:K02809,ko:K02810	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This system is involved in N-acetylmuramic acid (MurNAc) transport, yielding cytoplasmic MurNAc-6-P. Is
PCFPDMBM_03015	1.99e-151	yfhB	3.1.3.27	-	E	ko:K18697	ko00564,map00564	ko00000,ko00001,ko01000	HAD superfamily (Subfamily IF) hydrolase, YfhB
PCFPDMBM_03016	6.97e-112	tadA	3.5.4.33	-	F	ko:K11991	-	ko00000,ko01000,ko03016	Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
PCFPDMBM_03017	0.0	mltF	-	-	M	ko:K18691	-	ko00000,ko01000,ko01011	Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella
PCFPDMBM_03018	0.0	purL	6.3.5.3	-	F	ko:K01952	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate
PCFPDMBM_03019	1.05e-295	yfhK	2.7.13.3	-	T	ko:K07711	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
PCFPDMBM_03020	4.01e-157	yfhG	-	-	NU	-	-	-	YfhG lipoprotein
PCFPDMBM_03021	3.98e-312	yfhA	-	-	T	ko:K07715	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko02022	COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
PCFPDMBM_03022	1.27e-72	glnB	-	-	K	ko:K04751	ko02020,map02020	ko00000,ko00001	nitrogen regulatory protein P-II
PCFPDMBM_03023	9e-275	hmp	1.14.12.17	-	C	ko:K05916	ko05132,map05132	ko00000,ko00001,ko01000	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
PCFPDMBM_03024	2.08e-302	glyA	2.1.2.1	-	E	ko:K00600	ko00260,ko00460,ko00630,ko00670,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko01523,map00260,map00460,map00630,map00670,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map01523	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
PCFPDMBM_03025	1.69e-88	yphA	-	-	S	ko:K15977	-	ko00000	SURF4 family
PCFPDMBM_03026	2.59e-236	yphH	-	-	GK	-	-	-	ROK family
PCFPDMBM_03027	0.0	yphG	-	-	S	-	-	-	Domain of unknown function (DUF5107)
PCFPDMBM_03028	4.29e-299	-	-	-	U	ko:K02100,ko:K03444,ko:K05548,ko:K06609,ko:K08137	-	ko00000,ko02000	Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family
PCFPDMBM_03029	1.82e-134	yphB	5.1.3.3	-	G	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Aldose 1-epimerase
PCFPDMBM_03030	2.6e-258	hcaT	1.5.1.2	-	EGP	ko:K00286,ko:K05820	ko00330,ko01100,ko01110,ko01130,ko01230,map00330,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000,ko02000	Major facilitator superfamily
PCFPDMBM_03031	2.2e-292	csiE	-	-	K	-	-	-	Stationary phase inducible protein CsiE
PCFPDMBM_03032	7.99e-138	Z012_08265	-	-	S	ko:K06925	-	ko00000,ko03016	transport system periplasmic component
PCFPDMBM_03033	1.81e-208	yohM	-	-	P	ko:K08970	-	ko00000,ko02000	Belongs to the NiCoT transporter (TC 2.A.52) family
PCFPDMBM_03035	7.5e-188	suhB	3.1.3.25	-	G	ko:K01092	ko00521,ko00562,ko01100,ko04070,map00521,map00562,map01100,map04070	ko00000,ko00001,ko00002,ko01000	Inositol monophosphatase
PCFPDMBM_03036	3.51e-165	trmJ	2.1.1.200	-	J	ko:K02533,ko:K15396	-	ko00000,ko01000,ko03016	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
PCFPDMBM_03037	1.27e-110	iscR	-	-	K	ko:K13643	-	ko00000,ko03000	Regulates the transcription of several operons and genes involved in the biogenesis of Fe-S clusters and Fe-S-containing proteins
PCFPDMBM_03038	8.62e-293	iscS	2.8.1.7	-	E	ko:K04487	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko02048,ko03016,ko03029	Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins
PCFPDMBM_03039	1.9e-86	iscU	-	-	C	ko:K04488	-	ko00000	A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters
PCFPDMBM_03040	1.82e-70	iscA	-	-	C	ko:K05997,ko:K13628	-	ko00000,ko03016	iron-sulfur cluster assembly protein
PCFPDMBM_03041	1.46e-113	hscB	-	-	O	ko:K04082	-	ko00000,ko03029,ko03110	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
PCFPDMBM_03042	0.0	hscA	-	-	O	ko:K04044	-	ko00000,ko03110	Chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB
PCFPDMBM_03043	4.43e-77	fdx	-	-	C	ko:K04755	-	ko00000	Ferredoxin, 2Fe-2S type, ISC system
PCFPDMBM_03044	6.44e-45	iscX	-	-	S	-	-	-	Fe-S assembly protein IscX
PCFPDMBM_03045	1.16e-304	pepB	3.4.11.23	-	E	ko:K07751	ko00480,ko01100,map00480,map01100	ko00000,ko00001,ko01000,ko01002	Probably plays an important role in intracellular peptide degradation
PCFPDMBM_03046	1.44e-181	sseB	-	-	S	-	-	-	enhanced serine sensitivity protein SseB
PCFPDMBM_03047	5.32e-167	-	-	-	K	-	-	-	Transcriptional regulator
PCFPDMBM_03048	2.82e-205	sseA	2.8.1.1, 2.8.1.2	-	P	ko:K01011	ko00270,ko00920,ko01100,ko01120,ko04122,map00270,map00920,map01100,map01120,map04122	ko00000,ko00001,ko01000	sulfurtransferase
PCFPDMBM_03049	0.0	malH	3.2.1.122, 3.2.1.86	GH4,GT4	G	ko:K01222,ko:K01232	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	6-phospho-alpha-glucosidase
PCFPDMBM_03050	0.0	ptsG_1	2.7.1.199, 2.7.1.208	-	G	ko:K02749,ko:K02750,ko:K02790,ko:K02791	ko00010,ko00500,ko00520,ko02060,map00010,map00500,map00520,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system
PCFPDMBM_03051	0.0	yfhM	-	-	P	ko:K06894	-	ko00000	Large extracellular alpha-helical protein
PCFPDMBM_03052	0.0	pbpC	2.4.1.129	GT51	M	ko:K05367	ko00550,map00550	ko00000,ko00001,ko01000,ko01003,ko01011	penicillin-binding protein 1C
PCFPDMBM_03053	5.2e-98	ndk	2.7.4.6	-	F	ko:K00940	ko00230,ko00240,ko00983,ko01100,ko01110,ko01130,ko04016,map00230,map00240,map00983,map01100,map01110,map01130,map04016	ko00000,ko00001,ko00002,ko01000,ko04131	Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate
PCFPDMBM_03054	1.1e-280	rlmN	2.1.1.192	-	J	ko:K06941	-	ko00000,ko01000,ko03009	Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs
PCFPDMBM_03055	6.21e-184	rodZ	-	-	S	ko:K15539	-	ko00000	Cytoskeletal protein that is involved in cell-shape control through regulation of the length of the long axis
PCFPDMBM_03056	1.63e-258	ispG	1.17.7.1, 1.17.7.3	-	I	ko:K03526	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
PCFPDMBM_03057	9.61e-307	hisS	6.1.1.21	-	J	ko:K01892	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	histidyl-tRNA synthetase
PCFPDMBM_03058	3.51e-129	yfgM	-	-	S	-	-	-	Tetratricopeptide repeat-like domain
PCFPDMBM_03059	4.52e-227	bamB	-	-	M	ko:K17713	-	ko00000,ko02000	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
PCFPDMBM_03060	0.0	der	-	-	S	ko:K03977	-	ko00000,ko03009	GTPase that plays an essential role in the late steps of ribosome biogenesis
PCFPDMBM_03061	0.0	dtpT	-	-	U	ko:K03305	-	ko00000	Proton-dependent permease that transports di- and tripeptides
PCFPDMBM_03062	4.21e-199	-	-	-	S	-	-	-	Protein involved in oxidoreductase activity
PCFPDMBM_03063	2.44e-45	yfgJ	-	-	S	-	-	-	zinc-ribbons
PCFPDMBM_03064	5.06e-65	-	-	-	-	-	-	-	-
PCFPDMBM_03065	1.11e-237	prt1	3.4.24.28	-	E	ko:K01400	-	ko00000,ko01000,ko01002	Zinc metalloprotease (Elastase)
PCFPDMBM_03066	6.05e-187	-	-	-	EGP	-	-	-	Major facilitator superfamily
PCFPDMBM_03067	3.06e-267	xseA	3.1.11.6	-	L	ko:K03601	ko03430,map03430	ko00000,ko00001,ko01000,ko03400	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PCFPDMBM_03068	0.0	guaB	1.1.1.205	-	F	ko:K00088	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth
PCFPDMBM_03069	0.0	guaA	6.3.5.2	-	F	ko:K01951	ko00230,ko00983,ko01100,map00230,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko01002	Catalyzes the synthesis of GMP from XMP
PCFPDMBM_03070	2.38e-150	-	-	-	S	-	-	-	Alpha/beta hydrolase family
PCFPDMBM_03071	1.05e-40	-	-	-	S	-	-	-	Protein of unknown function (DUF1471)
PCFPDMBM_03072	6.17e-104	-	-	-	-	-	-	-	-
PCFPDMBM_03073	1.63e-149	-	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	reductase
PCFPDMBM_03074	8.75e-237	-	-	-	P	-	-	-	Major facilitator superfamily
PCFPDMBM_03075	6.99e-175	cysL_1	-	-	K	-	-	-	transcriptional regulator
PCFPDMBM_03076	0.0	yfgF	-	-	T	-	-	-	phosphodiesterase
PCFPDMBM_03077	0.0	ppx	3.6.1.11, 3.6.1.40	-	FP	ko:K01524	ko00230,map00230	ko00000,ko00001,ko01000	Belongs to the GppA Ppx family
PCFPDMBM_03078	0.0	ppk	2.7.4.1	-	H	ko:K00937	ko00190,ko03018,map00190,map03018	ko00000,ko00001,ko01000,ko03019	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
PCFPDMBM_03079	8.37e-145	purN	2.1.2.2	-	F	ko:K11175	ko00230,ko00670,ko01100,ko01110,ko01130,map00230,map00670,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
PCFPDMBM_03080	2.98e-245	purM	6.3.3.1	-	F	ko:K01933	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	AIR synthase related protein, N-terminal domain
PCFPDMBM_03081	0.0	celA	3.2.1.21, 3.2.1.86	GT1	G	ko:K01223,ko:K05350	ko00010,ko00460,ko00500,ko00940,ko01100,ko01110,map00010,map00460,map00500,map00940,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
PCFPDMBM_03082	2.71e-143	upp	2.4.2.9	-	F	ko:K00761	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
PCFPDMBM_03083	4.57e-287	uraA	-	-	F	ko:K02824,ko:K09016	-	ko00000,ko02000	Xanthine uracil
PCFPDMBM_03084	3.35e-161	hda	-	-	L	ko:K10763	-	ko00000,ko03032	Mediates the interaction of DNA replication inititator protein DnaA with DNA polymerase subunit beta sliding clamp (dnaN). Stimulates hydrolysis of ATP-DnaA to ADP-DnaA, rendering DnaA inactive for reinititation, a process called regulatory inhibition of DnaA or RIDA
PCFPDMBM_03085	9.71e-69	arsC	1.20.4.1	-	P	ko:K00537	-	ko00000,ko01000	arsenate reductase
PCFPDMBM_03086	0.0	bepA	-	-	S	-	-	-	Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state
PCFPDMBM_03087	1.39e-222	perM	-	-	S	ko:K03548	-	ko00000,ko02000	permease
PCFPDMBM_03088	2.14e-110	bcp	1.11.1.15	-	O	ko:K03564	-	ko00000,ko01000	PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
PCFPDMBM_03089	3.92e-129	gcvR	-	-	E	ko:K03567	ko02026,map02026	ko00000,ko00001,ko03000	glycine cleavage system
PCFPDMBM_03090	4.38e-209	dapA	4.3.3.7	-	E	ko:K01714	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
PCFPDMBM_03091	6.82e-230	bamC	-	-	M	ko:K07287	-	ko00000,ko02000	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
PCFPDMBM_03092	9.05e-170	purC	6.3.2.6	-	F	ko:K01923	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the SAICAR synthetase family
PCFPDMBM_03093	4.75e-191	ypfJ	-	-	S	ko:K07054	-	ko00000	Putative neutral zinc metallopeptidase
PCFPDMBM_03094	0.0	tmcA	2.3.1.193	-	J	ko:K06957	-	ko00000,ko01000,ko03016	Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of tRNA(Met), by using acetyl-CoA as an acetyl donor and ATP (or GTP)
PCFPDMBM_03095	7.07e-155	ypfH	-	-	S	ko:K06999	-	ko00000	Phospholipase Carboxylesterase
PCFPDMBM_03096	1.95e-41	ypfN	-	-	S	-	-	-	UPF0370 protein
PCFPDMBM_03097	7.41e-277	dapE	3.5.1.18	-	E	ko:K01439	ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
PCFPDMBM_03098	1.14e-80	yffB	1.20.4.1	-	P	ko:K00537	-	ko00000,ko01000	Belongs to the ArsC family
PCFPDMBM_03099	0.0	acrD	-	-	V	ko:K18324	ko02020,map02020	ko00000,ko00001,ko00002,ko02000	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PCFPDMBM_03100	0.0	narQ	2.7.13.3	-	T	ko:K07673,ko:K07674	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
PCFPDMBM_03101	0.0	gltD	1.4.1.13, 1.4.1.14	-	C	ko:K00266	ko00250,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00250,map00910,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko01000	Glutamate synthase
PCFPDMBM_03102	9.74e-124	nudK	3.6.1.45	-	L	ko:K08077,ko:K12945	-	ko00000,ko01000	GDP-mannose pyrophosphatase
PCFPDMBM_03103	1.79e-234	ypfG	-	-	S	-	-	-	Protein of unknown function (DUF1176)
PCFPDMBM_03104	0.0	tktA	2.2.1.1	-	G	ko:K00615	ko00030,ko00710,ko01051,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01051,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
PCFPDMBM_03105	1.93e-215	talA	2.2.1.2	-	G	ko:K00616	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
PCFPDMBM_03106	0.0	maeB	1.1.1.38, 1.1.1.40	-	C	ko:K00027,ko:K00029	ko00620,ko00710,ko01100,ko01120,ko01200,ko02020,map00620,map00710,map01100,map01120,map01200,map02020	ko00000,ko00001,ko00002,ko01000	Malic enzyme
PCFPDMBM_03107	1.37e-218	hemF	1.3.3.3	-	H	ko:K00228	ko00860,ko01100,ko01110,map00860,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX
PCFPDMBM_03108	9.4e-199	amiA	3.5.1.28	-	M	ko:K01448	ko01503,map01503	ko00000,ko00001,ko00002,ko01000,ko01011,ko03036	N-acetylmuramoyl-L-alanine amidase
PCFPDMBM_03109	5.66e-101	ypeA	-	-	K	-	-	-	Belongs to the acetyltransferase family. YpeA subfamily
PCFPDMBM_03110	1.11e-95	yfeZ	-	-	S	-	-	-	membrane
PCFPDMBM_03111	8.49e-125	yfeY	-	-	S	-	-	-	Lipoprotein
PCFPDMBM_03112	1.65e-212	yfeX	-	-	P	ko:K07223	-	ko00000	peroxidase
PCFPDMBM_03113	9.17e-241	cysP	-	-	P	ko:K02048	ko00920,ko02010,map00920,map02010	ko00000,ko00001,ko00002,ko02000	Thiosulfate transporter subunit
PCFPDMBM_03114	1.43e-186	cysT	-	-	P	ko:K02046	ko00920,ko02010,map00920,map02010	ko00000,ko00001,ko00002,ko02000	sulfate ABC transporter
PCFPDMBM_03115	6.91e-201	cysW	-	-	P	ko:K02047	ko00920,ko02010,map00920,map02010	ko00000,ko00001,ko00002,ko02000	(ABC) transporter
PCFPDMBM_03116	4.04e-264	cysA	3.6.3.25	-	P	ko:K02045	ko00920,ko02010,map00920,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
PCFPDMBM_03117	5.09e-209	cysM	2.5.1.47	-	E	ko:K12339	ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the cysteine synthase cystathionine beta- synthase family
PCFPDMBM_03118	4.94e-183	pdxK	2.7.1.35	-	H	ko:K00868	ko00750,ko01100,map00750,map01100	ko00000,ko00001,ko01000	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
PCFPDMBM_03119	2.08e-111	crr	-	-	G	ko:K02777	ko00010,ko00500,ko00520,ko02026,ko02060,ko05111,map00010,map00500,map00520,map02026,map02060,map05111	ko00000,ko00001,ko00002,ko01000,ko02000	pts system
PCFPDMBM_03120	0.0	ptsI	2.7.3.9	-	G	ko:K08483,ko:K11189,ko:K11201	ko02060,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
PCFPDMBM_03121	3.35e-51	ptsH	-	-	G	ko:K02784	ko02060,map02060	ko00000,ko00001,ko02000	PTS HPr component phosphorylation site
PCFPDMBM_03122	1.23e-226	cysK	2.5.1.47	-	E	ko:K01738	ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the cysteine synthase cystathionine beta- synthase family
PCFPDMBM_03123	6.15e-185	cysZ	-	-	U	ko:K06203	-	ko00000	High affinity, high specificity proton-dependent sulfate transporter, which mediates sulfate uptake. Provides the sulfur source for the cysteine synthesis pathway
PCFPDMBM_03124	1.58e-161	zipA	-	-	D	ko:K03528	-	ko00000,ko03036	Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins
PCFPDMBM_03125	0.0	ligA	6.5.1.2	-	L	ko:K01972	ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430	ko00000,ko00001,ko01000,ko03032,ko03400	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
PCFPDMBM_03126	4.53e-45	ypeB	-	-	S	ko:K09954	-	ko00000	protein conserved in bacteria
PCFPDMBM_03127	1.4e-216	yfeH	-	-	S	ko:K14347	-	ko00000,ko02000,ko04147	Bile acid sodium symporter
PCFPDMBM_03128	3.61e-197	yfeR	-	-	K	ko:K17737	-	ko00000,ko03000	transcriptional regulator
PCFPDMBM_03129	1.32e-19	flxA	-	-	S	-	-	-	FlxA-like protein
PCFPDMBM_03134	0.0	gltX	6.1.1.17	-	J	ko:K01885	ko00860,ko00970,ko01100,ko01110,ko01120,map00860,map00970,map01100,map01110,map01120	ko00000,ko00001,ko00002,ko01000,ko01007,ko02048,ko03016	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
PCFPDMBM_03135	7.17e-68	yfeD	-	-	L	-	-	-	Putative transcription regulator (DUF1323)
PCFPDMBM_03136	5.62e-68	yfeC	-	-	L	-	-	-	Negative Regulator
PCFPDMBM_03139	0.0	yfeA	-	-	T	-	-	-	cyclic-guanylate-specific phosphodiesterase activity
PCFPDMBM_03140	8.49e-252	nupC	-	-	P	ko:K03317,ko:K11535	-	ko00000,ko02000	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
PCFPDMBM_03141	2.6e-264	mntH	-	-	P	ko:K03322	-	ko00000,ko02000	H( )-stimulated, divalent metal cation uptake system
PCFPDMBM_03142	1.5e-57	ypeC	-	-	S	-	-	-	Protein of unknown function (DUF2502)
PCFPDMBM_03143	4.46e-229	yghZ	-	-	C	ko:K19265	-	ko00000,ko01000	reductase
PCFPDMBM_03144	0.0	ipdC	4.1.1.1, 4.1.1.74	-	GH	ko:K01568,ko:K04103	ko00010,ko00380,ko01100,ko01110,ko01130,map00010,map00380,map01100,map01110,map01130	ko00000,ko00001,ko01000	Belongs to the TPP enzyme family
PCFPDMBM_03145	1.66e-257	yfeO	-	-	P	-	-	-	ion-transport protein
PCFPDMBM_03146	2.06e-233	glk	2.7.1.2	-	F	ko:K00845	ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Belongs to the bacterial glucokinase family
PCFPDMBM_03147	3.63e-164	ypdB	-	-	K	ko:K02477,ko:K07705	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	response regulator
PCFPDMBM_03148	0.0	ypdA	2.7.13.3	-	T	ko:K02478	-	ko00000,ko01000,ko01001,ko02022	Histidine kinase
PCFPDMBM_03149	3.06e-302	yfdZ	-	-	E	ko:K14261	-	ko00000,ko01000,ko01007	aminotransferase
PCFPDMBM_03150	1.43e-200	lpxL	2.3.1.241, 2.3.1.242	-	M	ko:K02517,ko:K12974	ko00540,ko01100,map00540,map01100	ko00000,ko00001,ko00002,ko01000,ko01005	Catalyzes the transfer of laurate from lauroyl-acyl carrier protein (ACP) to Kdo(2)-lipid IV(A) to form Kdo(2)- (lauroyl)-lipid IV(A)
PCFPDMBM_03151	2.56e-278	-	-	-	-	-	-	-	-
PCFPDMBM_03153	0.0	-	6.3.2.10	-	M	ko:K01929	ko00300,ko00550,ko01100,ko01502,map00300,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Bacterial capsule synthesis protein PGA_cap
PCFPDMBM_03154	1.12e-170	-	-	-	S	-	-	-	alpha beta
PCFPDMBM_03155	0.0	-	-	-	M	-	-	-	Pfam Methyltransferase
PCFPDMBM_03156	6.12e-146	lapF	-	-	S	-	-	-	Periplasmic Protein
PCFPDMBM_03157	0.0	lapD	-	-	T	-	-	-	GGDEF domain
PCFPDMBM_03158	2.18e-69	-	-	-	S	-	-	-	Tryptophan synthase subunit beta
PCFPDMBM_03160	1.16e-247	-	3.4.21.10	-	Q	ko:K01317	-	ko00000,ko01000,ko01002,ko04131	calcium- and calmodulin-responsive adenylate cyclase activity
PCFPDMBM_03161	4.37e-302	aggA	-	-	MU	ko:K12543	-	ko00000,ko00002,ko02000,ko02044	type I secretion outer membrane protein, TolC
PCFPDMBM_03162	0.0	lapB	-	-	V	ko:K12541	ko02010,map02010	ko00000,ko00001,ko00002,ko02000,ko02044	COG2274 ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
PCFPDMBM_03163	8.56e-261	lssD	-	-	M	ko:K02022,ko:K12542	-	ko00000,ko00002,ko02000,ko02044	Type I secretion membrane fusion protein, HlyD
PCFPDMBM_03164	1.3e-104	yaiL	-	-	S	ko:K09912	-	ko00000	protein conserved in bacteria
PCFPDMBM_03165	2.24e-89	-	-	-	Q	-	-	-	Isochorismatase family
PCFPDMBM_03166	2.59e-206	-	-	-	N	ko:K02406	ko02020,ko02040,ko04621,ko04626,ko05132,ko05134,map02020,map02040,map04621,map04626,map05132,map05134	ko00000,ko00001,ko02035	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
PCFPDMBM_03169	8.86e-199	yfdC	-	-	P	ko:K21990	-	ko00000	Formate nitrite
PCFPDMBM_03170	2.32e-183	vacJ	-	-	M	ko:K04754	-	ko00000	Lipoprotein
PCFPDMBM_03171	0.0	fadL	-	-	I	ko:K06076	-	ko00000,ko02000	long-chain fatty acid transport protein
PCFPDMBM_03172	2.82e-54	yfcZ	-	-	S	-	-	-	protein conserved in bacteria
PCFPDMBM_03173	1.52e-300	fadI	2.3.1.16	-	I	ko:K00632	ko00071,ko00280,ko00281,ko00362,ko00592,ko00642,ko01100,ko01110,ko01120,ko01130,ko01212,map00071,map00280,map00281,map00362,map00592,map00642,map01100,map01110,map01120,map01130,map01212	ko00000,ko00001,ko00002,ko01000	Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed
PCFPDMBM_03174	0.0	fadJ	1.1.1.35, 4.2.1.17, 5.1.2.3	-	I	ko:K01782	ko00071,ko00280,ko00281,ko00310,ko00362,ko00380,ko00410,ko00640,ko00650,ko00903,ko00930,ko01040,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00071,map00280,map00281,map00310,map00362,map00380,map00410,map00640,map00650,map00903,map00930,map01040,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002,ko01000	Involved in the aerobic and anaerobic degradation of long-chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate
PCFPDMBM_03175	5.53e-84	sixA	-	-	T	ko:K08296	-	ko00000,ko01000	phosphohistidine phosphatase
PCFPDMBM_03176	1.38e-126	yfcN	-	-	S	-	-	-	Belongs to the UPF0115 family
PCFPDMBM_03177	2.92e-232	prmB	2.1.1.298	-	J	ko:K07320	-	ko00000,ko01000,ko03009	Specifically methylates the 50S ribosomal protein L3 on a specific glutamine residue
PCFPDMBM_03178	3.83e-256	aroC	4.2.3.5	-	E	ko:K01736	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
PCFPDMBM_03179	9.45e-195	mepA	-	-	M	ko:K07261	-	ko00000,ko01000,ko01002,ko01011	Murein endopeptidase that cleaves the D-alanyl-meso-2,6- diamino-pimelyl amide bond that connects peptidoglycan strands. Likely plays a role in the removal of murein from the sacculus
PCFPDMBM_03180	4.3e-173	yfcA	-	-	S	ko:K07090,ko:K11312	-	ko00000	membrane transporter protein
PCFPDMBM_03181	8.72e-136	yfcM	-	-	S	ko:K09906	-	ko00000,ko01000,ko03012	protein conserved in bacteria
PCFPDMBM_03182	1.11e-55	yfcL	-	-	S	-	-	-	YfcL protein
PCFPDMBM_03183	0.0	mnmC	2.1.1.61	-	J	ko:K15461	-	ko00000,ko01000,ko03016	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
PCFPDMBM_03184	1.85e-283	fabB	2.3.1.41	-	H	ko:K00647	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Belongs to the beta-ketoacyl-ACP synthases family
PCFPDMBM_03185	3.99e-260	yfcJ	-	-	P	-	-	-	MFS-type transporter
PCFPDMBM_03186	3.67e-213	flk	-	-	N	-	-	-	Acts as a regulator of flagellar gene expression by modulating the protein level of the anti sigma factor FlgM upon sensing ring completion or hook elongation. Flk could inhibit FlgM secretion by acting as a braking system for the flagellar- associated type III secretion
PCFPDMBM_03187	2.08e-264	pdxB	1.1.1.290	-	H	ko:K03473	ko00750,ko01100,map00750,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of erythronate-4-phosphate to 3- hydroxy-2-oxo-4-phosphonooxybutanoate
PCFPDMBM_03188	5.52e-221	usg	1.2.1.11	-	E	ko:K00133	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
PCFPDMBM_03189	5.93e-196	truA	5.4.99.12	-	J	ko:K06173	-	ko00000,ko01000,ko03016	Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
PCFPDMBM_03190	8.33e-148	dedA	-	-	I	ko:K03975	-	ko00000	Pfam SNARE associated Golgi protein
PCFPDMBM_03191	3.34e-213	accD	2.1.3.15, 6.4.1.2	-	I	ko:K01963	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002,ko01000	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
PCFPDMBM_03192	3.52e-292	folC	6.3.2.12, 6.3.2.17	-	H	ko:K11754	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	Functions in two distinct reactions of the de novo folate biosynthetic pathway. Catalyzes the addition of a glutamate residue to dihydropteroate (7,8-dihydropteroate or H2Pte) to form dihydrofolate (7,8-dihydrofolate monoglutamate or H2Pte-Glu). Also catalyzes successive additions of L-glutamate to tetrahydrofolate or 10-formyltetrahydrofolate or 5,10-methylenetetrahydrofolate, leading to folylpolyglutamate derivatives
PCFPDMBM_03193	9.03e-150	dedD	-	-	D	ko:K03749	-	ko00000	Non-essential cell division protein that could be required for efficient cell constriction
PCFPDMBM_03194	3.78e-107	cvpA	-	-	S	ko:K03558	-	ko00000	Colicin v production
PCFPDMBM_03195	0.0	purF	2.4.2.14	-	F	ko:K00764	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko01002	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
PCFPDMBM_03196	3.61e-125	ubiX	2.5.1.129	-	H	ko:K03186	ko00130,ko00627,ko00940,ko01100,ko01110,ko01120,ko01220,map00130,map00627,map00940,map01100,map01110,map01120,map01220	ko00000,ko00001,ko00002,ko01000	Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN
PCFPDMBM_03197	3.25e-179	argT	-	-	ET	ko:K09996,ko:K10013,ko:K10014	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	belongs to the bacterial solute-binding protein 3 family
PCFPDMBM_03198	3.39e-181	hisJ	-	-	ET	ko:K09996,ko:K10013,ko:K10014	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	belongs to the bacterial solute-binding protein 3 family
PCFPDMBM_03199	1e-148	hisQ	-	-	P	ko:K10016,ko:K10024	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	(ABC) transporter
PCFPDMBM_03200	4.25e-159	hisM	-	-	P	ko:K10015	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	polar amino acid ABC transporter, inner membrane subunit
PCFPDMBM_03201	2.89e-176	hisP	3.6.3.21	-	E	ko:K10017	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	abc transporter atp-binding protein
PCFPDMBM_03202	1.51e-105	-	-	-	J	-	-	-	PFAM GCN5-related N-acetyltransferase
PCFPDMBM_03203	8.78e-207	yfcH	-	-	CH	ko:K07071	-	ko00000	epimerase
PCFPDMBM_03204	6.23e-75	folX	5.1.99.7	-	H	ko:K07589	ko00790,map00790	ko00000,ko00001,ko01000	Dihydroneopterin aldolase
PCFPDMBM_03205	2.77e-132	yfcG	-	-	O	ko:K11209	-	ko00000,ko01000	Belongs to the GST superfamily
PCFPDMBM_03206	5.38e-137	yfcF	2.5.1.18	-	O	ko:K00799	ko00480,ko00980,ko00982,ko00983,ko01524,ko05200,ko05204,ko05225,ko05418,map00480,map00980,map00982,map00983,map01524,map05200,map05204,map05225,map05418	ko00000,ko00001,ko01000,ko02000	Glutathione S-transferase
PCFPDMBM_03207	9.33e-125	yfcE	-	-	S	ko:K07095	-	ko00000	Phosphoesterase
PCFPDMBM_03208	1.07e-118	yfcD	-	-	L	-	-	-	Nudix hydrolase
PCFPDMBM_03209	0.0	pta	2.3.1.8	-	C	ko:K13788	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	belongs to the CobB CobQ family
PCFPDMBM_03210	4.56e-286	ackA	2.7.2.1, 2.7.2.15	-	F	ko:K00925,ko:K00932	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PCFPDMBM_03211	3.19e-105	yfbV	-	-	S	ko:K09899	-	ko00000	UPF0208 membrane protein
PCFPDMBM_03212	1.48e-114	yfbU	-	-	S	ko:K09161	-	ko00000	Belongs to the UPF0304 family
PCFPDMBM_03213	5.78e-139	yfbT	3.1.3.23	-	S	ko:K19270	-	ko00000,ko01000	Phosphatase
PCFPDMBM_03214	0.0	yfbS	-	-	P	-	-	-	COG0471 Di- and tricarboxylate transporters
PCFPDMBM_03215	4.71e-135	yfbR	3.1.3.89	-	S	ko:K08722	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
PCFPDMBM_03216	2.92e-300	alaA	2.6.1.2, 2.6.1.66	-	E	ko:K14260	ko00220,ko00250,ko00290,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00290,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko01000,ko01007	in Corynebacterium glutamicum this protein can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor'
PCFPDMBM_03217	5.9e-208	lrhA	-	-	K	-	-	-	Transcriptional regulator
PCFPDMBM_03218	2.66e-97	nuoA	1.6.5.3	-	C	ko:K00330	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
PCFPDMBM_03219	7.5e-167	nuoB	1.6.5.3	-	C	ko:K00331	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
PCFPDMBM_03220	0.0	nuoC	1.6.5.3	-	C	ko:K13378	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
PCFPDMBM_03221	2.76e-120	nuoE	1.6.5.3	-	C	ko:K00334	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
PCFPDMBM_03222	0.0	nuoF	1.6.5.3	-	C	ko:K00335	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
PCFPDMBM_03223	0.0	nuoG	1.6.5.3	-	C	ko:K00336	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	NADH-quinone oxidoreductase
PCFPDMBM_03224	2.81e-233	nuoH	1.6.5.3	-	C	ko:K00337	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
PCFPDMBM_03225	2.29e-119	nuoI	1.6.5.3	-	C	ko:K00338	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
PCFPDMBM_03226	3.33e-114	nuoJ	1.6.5.3	-	C	ko:K00339	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the complex I subunit 6 family
PCFPDMBM_03227	7.8e-57	nuoK	1.6.5.3	-	C	ko:K00340	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
PCFPDMBM_03228	0.0	nuoL	1.6.5.3	-	CP	ko:K00341	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	NADH ubiquinone
PCFPDMBM_03229	0.0	nuoM	1.6.5.3	-	C	ko:K00342	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	NADH ubiquinone oxidoreductase subunit
PCFPDMBM_03230	0.0	nuoN	1.6.5.3	-	C	ko:K00343	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
PCFPDMBM_03231	1.17e-225	cheV	-	-	T	ko:K03415	ko02020,ko02030,map02020,map02030	ko00000,ko00001,ko00002,ko02022,ko02035	Two component signalling adaptor domain
PCFPDMBM_03232	3.29e-206	rnz	3.1.26.11	-	S	ko:K00784	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
PCFPDMBM_03233	9.83e-101	elaA	-	-	S	ko:K02348	-	ko00000	Acyltransferase
PCFPDMBM_03234	4.49e-61	elaB	-	-	S	ko:K05594	-	ko00000	ribosome binding
PCFPDMBM_03235	1.69e-267	menF	5.4.4.2	-	H	ko:K01851,ko:K02361,ko:K02552	ko00130,ko01053,ko01100,ko01110,ko01130,map00130,map01053,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of chorismate to isochorismate
PCFPDMBM_03236	0.0	menD	2.2.1.9	-	H	ko:K02551	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
PCFPDMBM_03237	9.91e-141	menH	4.2.99.20	-	H	ko:K08680	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes a proton abstraction reaction that results in 2,5-elimination of pyruvate from 2-succinyl-5-enolpyruvyl-6- hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC) and the formation of 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate (SHCHC)
PCFPDMBM_03238	1.31e-211	menB	4.1.3.36	-	H	ko:K01661	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
PCFPDMBM_03239	4.46e-228	menC	4.2.1.113	-	H	ko:K02549	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB)
PCFPDMBM_03240	0.0	menE	6.2.1.26	-	IQ	ko:K00666,ko:K01911	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	TIGRFAM O-succinylbenzoate-CoA ligase
PCFPDMBM_03241	0.0	tctA	-	-	S	ko:K07793	ko02020,map02020	ko00000,ko00001,ko02000	Tripartite tricarboxylate transporter TctA
PCFPDMBM_03242	5.41e-100	tctB	-	-	S	ko:K07794	ko02020,map02020	ko00000,ko00001,ko02000	Tripartite tricarboxylate transporter TctB family
PCFPDMBM_03243	1.45e-231	tctC	-	-	S	ko:K07795	ko02020,map02020	ko00000,ko00001,ko02000	Tripartite tricarboxylate transporter family receptor
PCFPDMBM_03244	2.14e-157	tctD	-	-	T	ko:K07774	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	Transcriptional
PCFPDMBM_03245	1.67e-307	tctE	2.7.13.3	-	T	ko:K07645,ko:K07649	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Two-component sensor kinase N-terminal
PCFPDMBM_03246	8.04e-124	yfaZ	-	-	S	-	-	-	YfaZ precursor
PCFPDMBM_03247	3.56e-262	yfaY	-	-	S	-	-	-	Belongs to the CinA family
PCFPDMBM_03248	1.01e-296	glpC	1.1.5.3	-	C	ko:K00113,ko:K11473	ko00564,ko00630,ko01100,ko01110,ko01120,ko01130,map00564,map00630,map01100,map01110,map01120,map01130	ko00000,ko00001,ko01000	Dehydrogenase
PCFPDMBM_03249	1.45e-280	glpB	1.1.5.3	-	C	ko:K00112	ko00564,ko01110,map00564,map01110	ko00000,ko00001,ko01000	Conversion of glycerol 3-phosphate to dihydroxyacetone. Uses fumarate or nitrate as electron acceptor
PCFPDMBM_03250	0.0	glpA	1.1.5.3	-	C	ko:K00111	ko00564,ko01110,map00564,map01110	ko00000,ko00001,ko01000	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
PCFPDMBM_03251	0.0	glpT	-	-	G	ko:K02445	-	ko00000,ko02000	transporter
PCFPDMBM_03252	7.42e-256	glpQ	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	glycerophosphoryl diester phosphodiesterase
PCFPDMBM_03253	1.17e-55	yfaE	-	-	C	ko:K11107	-	ko00000	Ferredoxin
PCFPDMBM_03254	5.41e-275	nrdB	1.17.4.1	-	F	ko:K00526	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PCFPDMBM_03255	0.0	nrdA	1.17.4.1	-	F	ko:K00525	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PCFPDMBM_03256	2.91e-169	ubiG	2.1.1.222, 2.1.1.64	-	H	ko:K00568	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway
PCFPDMBM_03257	0.0	gyrA	5.99.1.3	-	L	ko:K02469	-	ko00000,ko01000,ko03032,ko03400	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PCFPDMBM_03258	0.0	rcsC	2.7.13.3	-	T	ko:K07677	ko02020,ko02026,map02020,map02026	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Component of the Rcs signaling system, which controls transcription of numerous genes. RcsC functions as a membrane- associated protein kinase that phosphorylates RcsD in response to environmental signals. The phosphoryl group is then transferred to the response regulator RcsB
PCFPDMBM_03259	3.83e-147	rcsB	-	-	K	ko:K07687	ko02020,ko02026,map02020,map02026	ko00000,ko00001,ko00002,ko02022	Component of the Rcs signaling system, which controls transcription of numerous genes. RcsB is the response regulator that binds to regulatory DNA regions
PCFPDMBM_03260	0.0	rcsD	2.7.13.3	-	T	ko:K07676,ko:K07687	ko02020,ko02026,map02020,map02026	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Component of the Rcs signaling system, which controls transcription of numerous genes. RcsD is a phosphotransfer intermediate between the sensor kinase RcsC and the response regulator RcsB. It acquires a phosphoryl group from RcsC and transfers it to RcsB
PCFPDMBM_03261	6.08e-254	ompC	-	-	M	ko:K09475,ko:K09476,ko:K11929,ko:K14062,ko:K16076	ko01501,ko02020,map01501,map02020	ko00000,ko00001,ko00002,ko01504,ko02000	Belongs to the Gram-negative porin family
PCFPDMBM_03262	1.98e-237	apbE	2.7.1.180	-	H	ko:K03734	-	ko00000,ko01000	Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
PCFPDMBM_03263	9.95e-228	ada	2.1.1.63	-	FL	ko:K00567,ko:K10778	-	ko00000,ko01000,ko03000,ko03400	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
PCFPDMBM_03264	6.35e-146	alkB	1.14.11.33	-	L	ko:K03919	-	ko00000,ko01000,ko03400	Alkylated DNA repair protein
PCFPDMBM_03265	0.0	yojI	-	-	PQ	ko:K06159,ko:K06160	ko02010,map02010	ko00000,ko00001,ko02000	Cyclic peptide transporter
PCFPDMBM_03266	8.7e-317	mgtE	-	-	P	ko:K06213	-	ko00000,ko02000	Acts as a magnesium transporter
PCFPDMBM_03267	1.34e-245	-	-	-	P	ko:K03321	-	ko00000,ko02000	COG0659 Sulfate permease and related transporters (MFS superfamily)
PCFPDMBM_03268	0.0	mqo	1.1.5.4	-	C	ko:K00116	ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00620,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	malate quinone oxidoreductase
PCFPDMBM_03269	8.49e-100	eco	-	-	M	ko:K08276	-	ko00000	General inhibitor of pancreatic serine proteases inhibits chymotrypsin, trypsin, elastases, factor X, kallikrein as well as a variety of other proteases
PCFPDMBM_03270	2.44e-49	ynaJ	-	-	S	-	-	-	Protein of unknown function (DUF2534)
PCFPDMBM_03271	1.05e-256	-	-	-	EGP	-	-	-	Major facilitator superfamily
PCFPDMBM_03272	0.0	-	-	-	S	-	-	-	Domain of unknown function (DUF1996)
PCFPDMBM_03273	2.27e-84	-	-	-	NU	ko:K21968	-	ko00000,ko02044	Part of the ecpRABCDE operon, which encodes the E.coli common pilus (ECP). ECP is found in both commensal and pathogenic strains and plays a dual role in early-stage biofilm development and host cell recognition (By similarity)
PCFPDMBM_03274	2.4e-218	-	-	-	S	ko:K21967	-	ko00000,ko02044	Part of the ecpRABCDE operon, which encodes the E.coli common pilus (ECP). ECP is found in both commensal and pathogenic strains and plays a dual role in early-stage biofilm development and host cell recognition. Tip pilus adhesin, which is required for assembly of EcpA into fibers (By similarity)
PCFPDMBM_03275	0.0	-	-	-	NU	ko:K21966	-	ko00000,ko02044	Part of the ecpRABCDE operon, which encodes the E.coli common pilus (ECP). ECP is found in both commensal and pathogenic strains and plays a dual role in early-stage biofilm development and host cell recognition (By similarity)
PCFPDMBM_03276	3.75e-108	matC	-	-	M	ko:K21965	-	ko00000,ko02044	Part of the ecpRABCDE operon, which encodes the E.coli common pilus (ECP). ECP is found in both commensal and pathogenic strains and plays a dual role in early-stage biofilm development and host cell recognition (By similarity)
PCFPDMBM_03277	2.09e-96	matB	-	-	S	ko:K21964	-	ko00000,ko02044	Part of the ecpRABCDE operon, which encodes the E.coli common pilus (ECP). ECP is found in both commensal and pathogenic strains and plays a dual role in early-stage biofilm development and host cell recognition. Major subunit of the fimbria
PCFPDMBM_03279	0.0	yejM	-	-	S	ko:K07014	-	ko00000	Hydrolase of alkaline phosphatase superfamily
PCFPDMBM_03280	2.45e-44	yejL	-	-	S	ko:K09904	-	ko00000	Belongs to the UPF0352 family
PCFPDMBM_03281	6.85e-230	ndpA	-	-	S	ko:K06899	-	ko00000,ko03036	Nucleoid-associated protein
PCFPDMBM_03282	4.49e-60	rplY	-	-	J	ko:K02897	ko03010,map03010	ko00000,ko00001,ko00002,ko03011	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
PCFPDMBM_03283	0.0	yejH	-	-	L	ko:K19789	-	ko00000,ko03400	Type III restriction protein res subunit
PCFPDMBM_03284	8.69e-167	rsuA	5.4.99.19	-	J	ko:K06183	-	ko00000,ko01000,ko03009	Belongs to the pseudouridine synthase RsuA family
PCFPDMBM_03285	1.03e-265	bcr	-	-	EGP	ko:K07552	-	ko00000,ko02000	Major facilitator superfamily
PCFPDMBM_03286	4.92e-71	yejG	-	-	S	-	-	-	YejG-like protein
PCFPDMBM_03287	0.0	yejF	-	-	P	ko:K13892,ko:K13896,ko:K19229,ko:K19230	ko01503,ko02010,map01503,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
PCFPDMBM_03288	3.06e-220	yejE	-	-	P	ko:K13895	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter (Permease
PCFPDMBM_03289	3.13e-252	yejB	-	-	P	ko:K13894	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter (permease)
PCFPDMBM_03290	0.0	yejA	-	-	E	ko:K02035,ko:K13893	ko02010,ko02024,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC-type oligopeptide transport system, periplasmic component
PCFPDMBM_03291	0.0	rtn	-	-	T	-	-	-	Involved in resistance to the phages N4 and lambda
PCFPDMBM_03292	1.58e-119	spr	3.4.17.13	-	M	ko:K13694	-	ko00000,ko01000,ko01002,ko01011	NlpC/P60 family
PCFPDMBM_03293	1.97e-150	lpxT	2.7.4.29	-	I	ko:K19803	-	ko00000,ko01000,ko01005	Involved in the modification of the lipid A domain of lipopolysaccharides (LPS). Transfers a phosphate group from undecaprenyl pyrophosphate (C55-PP) to lipid A to form lipid A 1- diphosphate. Contributes to the recycling of undecaprenyl phosphate (C55-P)
PCFPDMBM_03294	1.14e-229	yeiR	-	-	S	-	-	-	cobalamin synthesis protein, P47K
PCFPDMBM_03295	0.0	yeiQ	1.1.1.57	-	G	ko:K00040	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the mannitol dehydrogenase family
PCFPDMBM_03296	2.35e-286	uxuA	4.2.1.8	-	G	ko:K01686	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the dehydration of D-mannonate
PCFPDMBM_03297	7.94e-134	yeiP	-	-	J	ko:K02356	-	ko00000,ko03012	Elongation factor P
PCFPDMBM_03298	2.81e-18	-	-	-	-	-	-	-	-
PCFPDMBM_03299	3.62e-260	setB	-	-	EGP	ko:K03291	-	ko00000,ko02000	sugar efflux transporter
PCFPDMBM_03300	1.32e-250	fruB	2.7.1.202	-	G	ko:K02768,ko:K11183	ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Bifunctional PTS system fructose-specific transporter subunit IIA HPr protein
PCFPDMBM_03301	1.43e-224	fruK	2.7.1.11, 2.7.1.56	-	H	ko:K00882,ko:K16370	ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	belongs to the carbohydrate kinase PfkB family
PCFPDMBM_03302	0.0	fruA	2.7.1.202	-	G	ko:K02768,ko:K02769,ko:K02770	ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Pts system fructose-specific
PCFPDMBM_03303	3.76e-167	psuK	2.7.1.83	-	G	ko:K16328	ko00240,map00240	ko00000,ko00001,ko01000	pseudouridine kinase activity
PCFPDMBM_03304	1.81e-188	psuG	4.2.1.70	-	Q	ko:K16329	ko00240,map00240	ko00000,ko00001,ko01000	Catalyzes the reversible cleavage of pseudouridine 5'- phosphate (PsiMP) to ribose 5-phosphate and uracil. Functions biologically in the cleavage direction, as part of a pseudouridine degradation pathway
PCFPDMBM_03305	6.94e-255	nupX	-	-	F	ko:K03317,ko:K16324,ko:K16325	-	ko00000,ko02000	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
PCFPDMBM_03306	7.65e-194	yeiI	2.7.1.83	-	G	ko:K16328	ko00240,map00240	ko00000,ko00001,ko01000	PfkB domain protein
PCFPDMBM_03307	5.42e-193	nfo	3.1.21.2	-	L	ko:K01151	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
PCFPDMBM_03308	2.97e-226	yeiH	-	-	S	-	-	-	Belongs to the UPF0324 family
PCFPDMBM_03309	6.17e-203	yeiE	-	-	K	-	-	-	transcriptional regulator
PCFPDMBM_03310	0.0	lysP	-	-	E	ko:K11733,ko:K16235	-	ko00000,ko02000	amino acid
PCFPDMBM_03311	0.0	cirA	-	-	P	ko:K16089,ko:K19611	ko02020,map02020	ko00000,ko00001,ko02000	receptor
PCFPDMBM_03312	4.88e-199	yeiG	3.1.2.12	CE1	S	ko:K01070	ko00680,ko01120,ko01200,map00680,map01120,map01200	ko00000,ko00001,ko01000	Serine hydrolase involved in the detoxification of formaldehyde
PCFPDMBM_03313	8.97e-254	yjiJ	-	-	EGP	-	-	-	Major facilitator superfamily
PCFPDMBM_03314	1.28e-148	folE	3.5.4.16	-	F	ko:K01495	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	GTP cyclohydrolase
PCFPDMBM_03315	6.48e-267	yeiB	-	-	S	ko:K07148	-	ko00000	Membrane
PCFPDMBM_03316	6.6e-233	galS	-	-	K	ko:K02529	-	ko00000,ko03000	transcriptional regulator
PCFPDMBM_03317	2.06e-234	mglB	-	-	G	ko:K10439,ko:K10540,ko:K17205,ko:K17213	ko02010,ko02030,map02010,map02030	ko00000,ko00001,ko00002,ko02000	Wtih MglAC is involved in the transport of beta-methylgalactoside
PCFPDMBM_03318	0.0	mglA	3.6.3.17	-	P	ko:K02056,ko:K10441,ko:K10542,ko:K10545,ko:K10562,ko:K17204	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	import. Responsible for energy coupling to the transport system
PCFPDMBM_03319	6.22e-222	mglC	-	-	P	ko:K10541	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
PCFPDMBM_03320	6.24e-162	sanA	-	-	S	ko:K03748	-	ko00000	Vancomycin high temperature exclusion protein
PCFPDMBM_03321	6.86e-198	cdd	3.5.4.5	-	F	ko:K01489	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis
PCFPDMBM_03322	3.45e-146	yohK	-	-	M	-	-	-	effector of murein hydrolase
PCFPDMBM_03323	7.61e-79	yohJ	-	-	S	ko:K06518	-	ko00000,ko02000	UPF0299 membrane protein
PCFPDMBM_03324	5.75e-214	dusC	-	-	J	ko:K05541	-	ko00000,ko01000,ko03016	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U16 in tRNAs
PCFPDMBM_03325	1.48e-284	mdtQ	-	-	MU	-	-	-	RND efflux system, outer membrane lipoprotein
PCFPDMBM_03326	5e-177	yohF	1.1.1.304, 1.1.1.76	-	IQ	ko:K03366	ko00650,map00650	ko00000,ko00001,ko01000	oxidoreductase
PCFPDMBM_03327	1.6e-122	yohD	-	-	S	-	-	-	Membrane
PCFPDMBM_03328	1.09e-21	-	-	-	-	-	-	-	-
PCFPDMBM_03329	3.47e-135	yohC	-	-	S	-	-	-	Membrane
PCFPDMBM_03330	2.06e-205	pbpG	-	-	M	ko:K07262	-	ko00000,ko01000,ko01002,ko01011	Belongs to the peptidase S11 family
PCFPDMBM_03331	1.05e-126	pat	2.3.1.183	-	M	ko:K03823	ko00440,ko01130,map00440,map01130	ko00000,ko00001,ko01000	N-acetyltransferase
PCFPDMBM_03332	0.0	dld	1.1.5.12	-	C	ko:K03777	ko00620,ko01120,map00620,map01120	ko00000,ko00001,ko01000	Catalyzes the oxidation of D-lactate to pyruvate
PCFPDMBM_03333	0.0	bglX	3.2.1.21	GH3	G	ko:K05349	ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 3 family
PCFPDMBM_03334	1.86e-246	-	3.2.1.15	-	G	ko:K01184	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the glycosyl hydrolase 28 family
PCFPDMBM_03335	0.0	-	-	-	G	ko:K03292,ko:K16210	-	ko00000,ko02000	MFS/sugar transport protein
PCFPDMBM_03336	1.92e-264	csbX	-	-	EGP	-	-	-	Major facilitator superfamily
PCFPDMBM_03337	1.03e-209	yehZ	-	-	M	ko:K05845	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Periplasmic glycine betaine choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)
PCFPDMBM_03338	5.38e-212	yehY	-	-	P	ko:K05846	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	permease
PCFPDMBM_03339	9.55e-201	yehX	-	-	E	ko:K05847	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	abc transporter atp-binding protein
PCFPDMBM_03340	4.26e-147	yehW	-	-	P	ko:K05846	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	permease
PCFPDMBM_03341	1.56e-13	yohO	-	-	S	-	-	-	UPF0387 membrane protein YohO
PCFPDMBM_03342	1.39e-172	mlrA	-	-	K	ko:K21089,ko:K21972,ko:K22491	ko02026,map02026	ko00000,ko00001,ko03000	Transcriptional regulator
PCFPDMBM_03343	0.0	yehU	2.7.13.3	-	T	ko:K02478	-	ko00000,ko01000,ko01001,ko02022	Histidine kinase
PCFPDMBM_03344	4.25e-160	yehT	-	-	KT	ko:K02477,ko:K07705	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	Response regulator of the LytR AlgR family
PCFPDMBM_03345	3.14e-105	yehS	-	-	S	-	-	-	Protein of unknown function (DUF1456)
PCFPDMBM_03346	0.0	metG	6.1.1.10	-	J	ko:K01874	ko00450,ko00970,map00450,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
PCFPDMBM_03347	3.17e-259	mrp	-	-	D	ko:K03593	-	ko00000,ko03029,ko03036	Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP
PCFPDMBM_03348	4.46e-72	yohN	-	-	D	-	-	-	response to cobalt ion
PCFPDMBM_03349	8.18e-190	wza	-	-	M	ko:K01991	ko02026,map02026	ko00000,ko00001,ko02000	polysaccharide export
PCFPDMBM_03350	6.8e-88	etp	3.1.3.48	-	T	ko:K01104,ko:K20945	ko05111,map05111	ko00000,ko00001,ko01000	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
PCFPDMBM_03351	0.0	wzc	-	-	D	ko:K16692	-	ko00000,ko01000,ko01001	protein involved in exopolysaccharide biosynthesis
PCFPDMBM_03352	0.0	ddc	4.1.1.86	-	E	ko:K13745	ko00260,ko01120,map00260,map01120	ko00000,ko00001,ko01000	decarboxylase
PCFPDMBM_03353	0.0	dat	2.6.1.76	-	E	ko:K00836	ko00260,ko01100,ko01120,ko01210,ko01230,map00260,map01100,map01120,map01210,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
PCFPDMBM_03354	1.51e-87	-	-	-	-	-	-	-	-
PCFPDMBM_03355	7.66e-226	-	-	-	S	-	-	-	PAAR repeat-containing protein
PCFPDMBM_03356	1.42e-74	-	-	-	S	-	-	-	PAAR repeat-containing protein
PCFPDMBM_03357	0.0	-	-	-	IQ	-	-	-	Belongs to the beta-ketoacyl-ACP synthases family
PCFPDMBM_03358	1.52e-203	-	-	-	H	-	-	-	Belongs to the beta-ketoacyl-ACP synthases family
PCFPDMBM_03359	1.3e-153	-	-	-	-	-	-	-	-
PCFPDMBM_03360	1.12e-137	-	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
PCFPDMBM_03361	1.52e-71	-	-	-	-	-	-	-	-
PCFPDMBM_03362	1.89e-248	VPA0017	-	-	M	ko:K02004	-	ko00000,ko00002,ko02000	MacB-like periplasmic core domain
PCFPDMBM_03363	2.79e-149	-	-	-	M	-	-	-	Outer membrane lipoprotein-sorting protein
PCFPDMBM_03364	6.48e-201	-	-	-	-	-	-	-	-
PCFPDMBM_03365	2.16e-163	-	2.3.1.39	-	I	ko:K00645	ko00061,ko00333,ko01100,ko01130,ko01212,map00061,map00333,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Acyl transferase domain
PCFPDMBM_03366	1.75e-115	ycdU	-	-	-	-	-	-	-
PCFPDMBM_03368	1.39e-143	yqgA	-	-	S	ko:K07150	-	ko00000	Membrane
PCFPDMBM_03369	0.0	speC	4.1.1.17	-	E	ko:K01581	ko00330,ko00480,ko01100,ko01110,ko01130,map00330,map00480,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	decarboxylase
PCFPDMBM_03370	1e-289	nupG	-	-	G	ko:K03289,ko:K11537	-	ko00000,ko02000	Broad-specificity transporter of purine and pyrimidine nucleosides. Driven by a proton motive force
PCFPDMBM_03371	1.62e-254	mltC	-	GH23	M	ko:K08306	-	ko00000,ko01000,ko01011	Murein-degrading enzyme. May play a role in recycling of muropeptides during cell elongation and or cell division
PCFPDMBM_03372	1.66e-60	yggX	-	-	CO	-	-	-	Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes
PCFPDMBM_03373	2.06e-259	mutY	-	-	L	ko:K03575	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	a g-specific adenine glycosylase
PCFPDMBM_03374	4.16e-176	trmB	2.1.1.33	-	J	ko:K03439	-	ko00000,ko01000,ko03016	catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
PCFPDMBM_03375	6.39e-71	yggL	-	-	S	ko:K09923	-	ko00000	protein conserved in bacteria
PCFPDMBM_03376	2.46e-159	yggN	-	-	S	-	-	-	Protein of unknown function (DUF2884)
PCFPDMBM_03377	5.71e-260	-	-	-	G	-	-	-	Tripartite ATP-independent periplasmic transporter, DctM component
PCFPDMBM_03378	1.26e-78	-	-	-	G	-	-	-	TRAP-type C4-dicarboxylate transport system small permease component
PCFPDMBM_03379	1.95e-194	-	-	-	G	-	-	-	Bacterial extracellular solute-binding protein, family 7
PCFPDMBM_03380	7.05e-273	yggW	-	-	H	-	-	-	Involved in the biosynthesis of porphyrin-containing compound
PCFPDMBM_03381	9.15e-132	rdgB	3.6.1.66	-	F	ko:K02428	ko00230,map00230	ko00000,ko00001,ko01000	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
PCFPDMBM_03382	3.09e-62	yggU	-	-	S	ko:K09131	-	ko00000	Belongs to the UPF0235 family
PCFPDMBM_03383	2.96e-119	yggT	-	-	S	ko:K02221	-	ko00000,ko02044	integral membrane protein
PCFPDMBM_03384	7.07e-156	yggS	-	-	E	ko:K06997	-	ko00000	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
PCFPDMBM_03385	2.08e-190	pilT	-	-	NU	ko:K02669	-	ko00000,ko02035,ko02044	PFAM Type II secretion system protein E
PCFPDMBM_03386	1.27e-152	-	-	-	K	-	-	-	Transcriptional regulator
PCFPDMBM_03387	5.49e-93	yqgF	-	-	L	ko:K07447	-	ko00000,ko01000	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
PCFPDMBM_03388	8.59e-127	yqgE	-	-	K	ko:K07735	-	ko00000,ko03000	Belongs to the UPF0301 (AlgH) family
PCFPDMBM_03389	2.3e-227	gshB	6.3.2.3	-	H	ko:K01920	ko00270,ko00480,ko01100,map00270,map00480,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the prokaryotic GSH synthase family
PCFPDMBM_03390	2.29e-166	rsmE	2.1.1.193	-	J	ko:K09761	-	ko00000,ko01000,ko03009	Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
PCFPDMBM_03391	4.82e-164	endA	3.1.21.1	-	L	ko:K01150	-	ko00000,ko01000	endonuclease I
PCFPDMBM_03392	6.45e-105	sprT	-	-	S	ko:K02742	-	ko00000	Belongs to the SprT family
PCFPDMBM_03393	0.0	galP	-	-	U	ko:K02100,ko:K05548,ko:K08137	-	ko00000,ko02000	Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family
PCFPDMBM_03394	7.62e-270	metK	2.5.1.6	-	H	ko:K00789	ko00270,ko01100,ko01110,ko01230,map00270,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
PCFPDMBM_03395	0.0	speA	4.1.1.19	-	H	ko:K01585	ko00330,ko01100,map00330,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the biosynthesis of agmatine from arginine
PCFPDMBM_03397	2.75e-274	-	-	-	G	-	-	-	Belongs to the glycosyl hydrolase 67 family
PCFPDMBM_03398	7.68e-274	ogl	4.2.2.6	-	U	ko:K01730	ko00040,map00040	ko00000,ko00001,ko01000	Oligogalacturonate lyase
PCFPDMBM_03399	5.92e-282	malE	-	-	G	ko:K02027	-	ko00000,ko00002,ko02000	ABC transporter substrate-binding protein
PCFPDMBM_03400	4.88e-159	ycjR	5.1.3.30, 5.1.3.31	-	G	ko:K18910	-	ko00000,ko01000	isomerase activity
PCFPDMBM_03401	9.37e-227	speB	3.5.3.11, 3.5.3.8	-	F	ko:K01479,ko:K01480	ko00330,ko00340,ko01100,map00330,map00340,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of putrescine from agmatine
PCFPDMBM_03402	2.4e-262	-	-	-	EGP	-	-	-	Major Facilitator Superfamily
PCFPDMBM_03403	4.46e-77	ndoA	-	-	C	ko:K05710,ko:K18248	ko00360,ko00627,ko01120,ko01220,map00360,map00627,map01120,map01220	br01602,ko00000,ko00001,ko00002	Rieske [2Fe-2S] domain
PCFPDMBM_03404	2.68e-67	-	-	-	-	-	-	-	-
PCFPDMBM_03405	1.98e-261	-	1.14.15.23	-	P	ko:K22325	-	ko00000,ko01000	Rieske [2Fe-2S] domain
PCFPDMBM_03406	1.04e-165	pldh-t	1.1.1.100	-	IQ	ko:K00059,ko:K10617	ko00061,ko00333,ko00622,ko00780,ko01040,ko01100,ko01120,ko01130,ko01212,ko01220,map00061,map00333,map00622,map00780,map01040,map01100,map01120,map01130,map01212,map01220	ko00000,ko00001,ko00002,ko01000,ko01004	COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PCFPDMBM_03407	7.14e-184	pcaR	-	-	K	-	-	-	helix_turn_helix isocitrate lyase regulation
PCFPDMBM_03408	1.56e-226	mcpII	-	-	C	-	-	-	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PCFPDMBM_03409	1.04e-268	andAa	1.18.1.3	-	P	ko:K00529	ko00071,ko00360,ko01120,ko01220,map00071,map00360,map01120,map01220	br01602,ko00000,ko00001,ko00002,ko01000	Pyridine nucleotide-disulphide oxidoreductase
PCFPDMBM_03410	8.61e-291	sauU	-	-	G	-	-	-	Major Facilitator Superfamily
PCFPDMBM_03411	4.87e-128	-	-	-	G	-	-	-	WxcM-like, C-terminal
PCFPDMBM_03412	1.17e-170	-	-	-	I	-	-	-	Alpha/beta hydrolase family
PCFPDMBM_03413	1.32e-180	baiA2	-	-	IQ	-	-	-	KR domain
PCFPDMBM_03414	6.63e-161	nadX	1.4.1.21	-	H	ko:K06989	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Specifically catalyzes the NAD or NADP-dependent dehydrogenation of L-aspartate to iminoaspartate
PCFPDMBM_03415	0.0	-	1.2.1.8	-	C	ko:K00130	ko00260,ko01100,map00260,map01100	ko00000,ko00001,ko00002,ko01000	Aldehyde dehydrogenase family
PCFPDMBM_03416	0.0	-	2.2.1.6	-	C	ko:K01652	ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Thiamine pyrophosphate enzyme, central domain
PCFPDMBM_03417	2.64e-165	yggG	-	-	O	ko:K07387	-	ko00000,ko01000,ko01002	metalloprotease
PCFPDMBM_03418	0.0	tktA	2.2.1.1	-	G	ko:K00615	ko00030,ko00710,ko01051,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01051,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
PCFPDMBM_03419	1.03e-242	epd	1.2.1.12, 1.2.1.72	-	G	ko:K00134,ko:K03472	ko00010,ko00710,ko00750,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map00750,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
PCFPDMBM_03420	2.64e-267	pgk	2.7.2.3	-	F	ko:K00927	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the phosphoglycerate kinase family
PCFPDMBM_03421	5.51e-264	fbaA	4.1.2.13	-	G	ko:K01624	ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Aldolase
PCFPDMBM_03422	4.37e-169	mscS	-	-	M	ko:K03442	-	ko00000,ko02000	Mechanosensitive Ion channel
PCFPDMBM_03423	5.43e-140	argO	-	-	S	ko:K06895	-	ko00000,ko02000	Involved in the export of arginine. Important to control the intracellular level of arginine and the correct balance between arginine and lysine
PCFPDMBM_03424	9.3e-154	yggE	-	-	S	ko:K09807	-	ko00000	Oxidative stress defense protein
PCFPDMBM_03425	2.98e-214	argP	-	-	K	ko:K05596	-	ko00000,ko03000,ko03036	Controls the transcription of genes involved in arginine and lysine metabolism
PCFPDMBM_03426	4.45e-158	rpiA	5.3.1.6	-	G	ko:K01807	ko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
PCFPDMBM_03427	1.61e-291	serA	1.1.1.399, 1.1.1.95	-	EH	ko:K00058	ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PCFPDMBM_03428	4.97e-112	ygfA	6.3.3.2	-	H	ko:K01934	ko00670,ko01100,map00670,map01100	ko00000,ko00001,ko01000	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
PCFPDMBM_03429	5.89e-63	zapA	-	-	D	ko:K09888	-	ko00000,ko03036	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
PCFPDMBM_03430	2.88e-133	ygfB	-	-	S	ko:K09895	-	ko00000	Belongs to the UPF0149 family
PCFPDMBM_03431	3.94e-308	pepP	3.4.11.9	-	E	ko:K01262	-	ko00000,ko01000,ko01002	aminopeptidase
PCFPDMBM_03432	1.09e-273	ubiH	-	-	CH	ko:K03185,ko:K18800	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	hydroxylase
PCFPDMBM_03433	7.55e-285	visC	-	-	CH	ko:K18800	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	ubiquinone biosynthesis hydroxylase, UbiH UbiF VisC COQ6
PCFPDMBM_03434	2.01e-256	gcvT	2.1.2.10	-	H	ko:K00605	ko00260,ko00630,ko00670,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map00670,map01100,map01110,map01130,map01200	ko00000,ko00001,ko00002,ko01000	The glycine cleavage system catalyzes the degradation of glycine
PCFPDMBM_03435	4.64e-83	gcvH	-	-	E	ko:K02437	ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200	ko00000,ko00001,ko00002	The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein
PCFPDMBM_03436	0.0	gcvP	1.4.4.2	-	E	ko:K00281,ko:K00283	ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200	ko00000,ko00001,ko00002,ko01000	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
PCFPDMBM_03437	8.19e-162	ygfF	-	-	IQ	-	-	-	Dehydrogenases with different specificities (Related to short-chain alcohol dehydrogenases)
PCFPDMBM_03438	0.0	bglA	3.2.1.21, 3.2.1.86	GT1	G	ko:K01223,ko:K05350	ko00010,ko00460,ko00500,ko00940,ko01100,ko01110,map00010,map00460,map00500,map00940,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
PCFPDMBM_03439	1.68e-168	ybbH_1	-	-	K	-	-	-	transcriptional regulator
PCFPDMBM_03440	6.56e-64	yqfB	-	-	S	ko:K09900	-	ko00000	Belongs to the UPF0267 family
PCFPDMBM_03441	7.99e-146	yqfA	-	-	S	ko:K11068	-	ko00000,ko02042	hemolysin iii
PCFPDMBM_03442	3.81e-227	ygfZ	-	-	S	ko:K06980	-	ko00000,ko03016	Folate-binding protein involved in regulating the level of ATP-DnaA and in the modification of some tRNAs. It is probably a key factor in regulatory networks that act via tRNA modification, such as initiation of chromosomal replication
PCFPDMBM_03443	4.65e-57	ygfY	-	-	S	ko:K09159	-	ko00000,ko02048	Flavinator of succinate dehydrogenase
PCFPDMBM_03444	1.45e-83	ygfX	-	-	S	ko:K19168	-	ko00000,ko02048	Membrane
PCFPDMBM_03445	4.35e-125	fldB	-	-	C	ko:K03840	-	ko00000	Low-potential electron donor to a number of redox enzymes
PCFPDMBM_03446	7.8e-206	xerD	-	-	D	ko:K04763	-	ko00000,ko03036	recombinase XerD
PCFPDMBM_03447	7.99e-164	dsbC	5.3.4.1	-	O	ko:K03981	-	ko00000,ko01000,ko02044,ko03110	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
PCFPDMBM_03448	0.0	recJ	-	-	L	ko:K07462	ko03410,ko03430,ko03440,map03410,map03430,map03440	ko00000,ko00001,ko01000,ko03400	Single-stranded-DNA-specific exonuclease
PCFPDMBM_03449	1.25e-204	prfB	-	-	J	ko:K02836	-	ko00000,ko03012	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
PCFPDMBM_03450	0.0	lysS	6.1.1.6	-	J	ko:K04567	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-II aminoacyl-tRNA synthetase family
PCFPDMBM_03451	1.26e-113	idi	4.1.1.33, 5.3.3.2	-	I	ko:K01597,ko:K01823	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
PCFPDMBM_03453	5.05e-141	nlpD	-	-	DM	ko:K06194,ko:K12943	-	ko00000	COG0739 Membrane proteins related to metalloendopeptidases
PCFPDMBM_03455	9.4e-108	-	-	-	T	-	-	-	Winged helix-turn-helix DNA binding
PCFPDMBM_03456	6.56e-195	ompA	-	-	M	ko:K03286	-	ko00000,ko02000	OmpA-like transmembrane domain
PCFPDMBM_03457	1.23e-22	-	-	-	-	-	-	-	-
PCFPDMBM_03458	1.06e-52	yjdI	-	-	S	-	-	-	Divergent 4Fe-4S mono-cluster
PCFPDMBM_03459	3.23e-58	yjdJ	-	-	S	ko:K06975	-	ko00000	GCN5-related N-acetyl-transferase
PCFPDMBM_03460	2.82e-264	yqeG	-	-	E	-	-	-	transporter
PCFPDMBM_03461	2.39e-92	-	-	-	S	-	-	-	PFAM transmembrane pair domain protein
PCFPDMBM_03462	1.74e-194	allS_1	-	-	K	-	-	-	Transcriptional regulator
PCFPDMBM_03463	3.9e-105	-	-	-	S	-	-	-	protein containing double-stranded beta helix domain
PCFPDMBM_03464	9.59e-268	yqeF	2.3.1.9	-	I	ko:K00626	ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed
PCFPDMBM_03465	7.17e-162	-	-	-	M	ko:K22110	-	ko00000,ko02000	oligogalacturonate-specific porin
PCFPDMBM_03466	3.28e-304	ogl	4.2.2.6	-	U	ko:K01730	ko00040,map00040	ko00000,ko00001,ko01000	oligogalacturonate lyase
PCFPDMBM_03467	4.73e-206	kduI	5.3.1.17	-	G	ko:K01815	ko00040,map00040	ko00000,ko00001,ko01000	Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
PCFPDMBM_03468	3.14e-178	kduD	1.1.1.127	-	IQ	ko:K00065	ko00040,map00040	ko00000,ko00001,ko01000	COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PCFPDMBM_03469	4.43e-307	araE	-	-	U	ko:K02100,ko:K05548,ko:K08137	-	ko00000,ko02000	Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family
PCFPDMBM_03470	8.05e-281	-	4.2.2.6	-	U	ko:K01730	ko00040,map00040	ko00000,ko00001,ko01000	Oligogalacturonate lyase
PCFPDMBM_03471	8.33e-315	yesO	-	-	G	ko:K10192	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
PCFPDMBM_03472	2.44e-266	ugpC	-	-	P	ko:K10112,ko:K10195	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
PCFPDMBM_03473	1.71e-210	togN	-	-	P	ko:K02026,ko:K10194	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	PFAM binding-protein-dependent transport systems inner membrane component
PCFPDMBM_03474	1.2e-208	ycjO	-	-	P	ko:K10193	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	PFAM binding-protein-dependent transport systems inner membrane component
PCFPDMBM_03475	2.61e-74	kdgF	-	-	S	-	-	-	PFAM Cupin 2, conserved barrel domain protein
PCFPDMBM_03476	4.81e-157	ygeA	5.1.1.13	-	M	ko:K01779	ko00250,ko01054,map00250,map01054	ko00000,ko00001,ko01000	Belongs to the aspartate glutamate racemases family
PCFPDMBM_03477	1.07e-210	lysR	-	-	K	-	-	-	transcriptional regulator
PCFPDMBM_03478	1.15e-296	lysA	4.1.1.20	-	E	ko:K01586	ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
PCFPDMBM_03479	5.06e-237	ascG	-	-	K	-	-	-	Transcriptional regulator
PCFPDMBM_03480	1e-305	-	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PCFPDMBM_03481	0.0	celH	3.2.1.21, 3.2.1.86	GT1	G	ko:K01223,ko:K05350	ko00010,ko00460,ko00500,ko00940,ko01100,ko01110,map00010,map00460,map00500,map00940,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
PCFPDMBM_03482	1.18e-175	uxuR	-	-	K	ko:K13637	-	ko00000,ko03000	FCD
PCFPDMBM_03483	1.18e-108	-	-	-	S	-	-	-	PFAM GCN5-related N-acetyltransferase
PCFPDMBM_03484	5.3e-240	galR	-	-	K	ko:K02529	-	ko00000,ko03000	transcriptional regulator
PCFPDMBM_03485	0.0	aas	2.3.1.40, 6.2.1.20	-	I	ko:K05939	ko00071,ko00564,map00071,map00564	ko00000,ko00001,ko01000	Plays a role in lysophospholipid acylation. Transfers fatty acids to the 1-position via an enzyme-bound acyl-ACP intermediate in the presence of ATP and magnesium. Its physiological function is to regenerate phosphatidylethanolamine from 2-acyl-glycero-3-phosphoethanolamine (2-acyl-GPE) formed by transacylation reactions or degradation by phospholipase A1
PCFPDMBM_03486	8.46e-256	lplT	-	-	U	ko:K08227	-	ko00000,ko02000	Catalyzes the facilitated diffusion of 2-acyl-glycero-3- phosphoethanolamine (2-acyl-GPE) into the cell
PCFPDMBM_03487	1.66e-247	tas	-	-	C	-	-	-	Aldo keto reductase
PCFPDMBM_03488	3.3e-43	ygdR	-	-	S	-	-	-	(Lipo)protein
PCFPDMBM_03489	1.75e-159	mutH	-	-	L	ko:K03573	ko03430,map03430	ko00000,ko00001,ko03400	Sequence-specific endonuclease that cleaves unmethylated GATC sequences. It is involved in DNA mismatch repair
PCFPDMBM_03490	1.9e-90	nudH	-	-	L	ko:K08311	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage
PCFPDMBM_03491	0.0	ptsP	2.7.3.9	-	T	ko:K08483,ko:K08484	ko02060,map02060	ko00000,ko00001,ko01000,ko02000	Belongs to the PEP-utilizing enzyme family
PCFPDMBM_03492	2.99e-215	lgt	-	-	M	ko:K13292	-	ko00000,ko01000	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
PCFPDMBM_03493	1.07e-204	thyA	2.1.1.45	-	F	ko:K00560	ko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523	ko00000,ko00001,ko00002,ko01000	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
PCFPDMBM_03494	3.55e-99	ppdA	-	-	NU	ko:K02679	-	ko00000,ko02044	prepilin peptidase dependent protein A
PCFPDMBM_03495	2.16e-100	ppdB	-	-	U	ko:K02680	-	ko00000,ko02044	prepilin peptidase dependent protein
PCFPDMBM_03496	1.16e-61	ygdB	-	-	S	-	-	-	Protein of unknown function (DUF2509)
PCFPDMBM_03497	3.87e-58	ppdC	-	-	NU	ko:K02681	-	ko00000,ko02044	Prepilin peptidase dependent protein c
PCFPDMBM_03498	0.0	recC	3.1.11.5	-	L	ko:K03583	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
PCFPDMBM_03499	0.0	ptrA	3.4.24.55	-	O	ko:K01407	-	ko00000,ko01000,ko01002	Belongs to the peptidase M16 family
PCFPDMBM_03500	0.0	recB	3.1.11.5	-	L	ko:K03582	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit contributes ATPase, 3'-5' helicase, exonuclease activity and loads RecA onto ssDNA
PCFPDMBM_03501	0.0	recD	3.1.11.5	-	L	ko:K03581	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
PCFPDMBM_03502	7.35e-307	argA	2.3.1.1	-	E	ko:K14682	ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the acetyltransferase family. ArgA subfamily
PCFPDMBM_03503	5.4e-268	amiC	3.5.1.28	-	M	ko:K01448	ko01503,map01503	ko00000,ko00001,ko00002,ko01000,ko01011,ko03036	N-acetylmuramoyl-L-alanine amidase
PCFPDMBM_03507	1.72e-264	mltA	-	GH102	M	ko:K08304	-	ko00000,ko01000,ko01011	Murein-degrading enzyme. May play a role in recycling of muropeptides during cell elongation and or cell division
PCFPDMBM_03508	3.54e-187	ygdL	-	-	H	ko:K22132	-	ko00000,ko03016	Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1
PCFPDMBM_03509	6.75e-91	csdE	-	-	S	ko:K02426	-	ko00000	cysteine desulfurase, sulfur acceptor subunit CsdE
PCFPDMBM_03510	3.95e-274	csdA	2.8.1.7, 4.4.1.16	-	E	ko:K01766,ko:K11717	ko00450,ko01100,map00450,map01100	ko00000,ko00001,ko01000	Cysteine desulfurases mobilize the sulfur from L- cysteine to yield L-alanine, an essential step in sulfur metabolism for biosynthesis of a variety of sulfur-containing biomolecules. Component of the suf operon, which is activated and required under specific conditions such as oxidative stress and iron limitation. Acts as a potent selenocysteine lyase in vitro, that mobilizes selenium from L-selenocysteine. Selenocysteine lyase activity is however unsure in vivo
PCFPDMBM_03511	6.23e-47	ygdI	-	-	S	-	-	-	Lipoprotein
PCFPDMBM_03512	1.53e-215	gcvA	-	-	K	ko:K03566	ko02026,map02026	ko00000,ko00001,ko03000	transcriptional regulator
PCFPDMBM_03513	5.83e-87	ygdD	-	-	S	-	-	-	Small membrane protein
PCFPDMBM_03514	3.61e-268	rlmM	2.1.1.186	-	J	ko:K06968	-	ko00000,ko01000,ko03009	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. RlmM subfamily
PCFPDMBM_03515	1.89e-176	xni	-	-	L	ko:K01146	-	ko00000	Has flap endonuclease activity. During DNA replication, flap endonucleases cleave the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment
PCFPDMBM_03516	0.0	sdaB	4.3.1.17	-	E	ko:K01752	ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230	ko00000,ko00001,ko01000	l-serine dehydratase
PCFPDMBM_03517	1.67e-289	sdaC	-	-	E	ko:K03837	-	ko00000,ko02000	Serine transporter
PCFPDMBM_03518	0.0	ygdH	3.2.2.10	-	S	ko:K06966	ko00230,ko00240,map00230,map00240	ko00000,ko00001,ko01000	Rossmann fold nucleotide-binding protein
PCFPDMBM_03519	1.07e-203	queF	1.7.1.13	-	K	ko:K06879,ko:K09457	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko01000,ko03016	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
PCFPDMBM_03520	3.23e-115	syd	-	-	S	ko:K15723	-	ko00000	Interacts with the SecY protein in vivo. May bind preferentially to an uncomplexed state of SecY, thus functioning either as a chelating agent for excess SecY in the cell or as a regulatory factor that negatively controls the translocase function
PCFPDMBM_03521	2.23e-71	yqcC	5.1.3.13	-	S	ko:K01790	ko00521,ko00523,ko01130,map00521,map00523,map01130	ko00000,ko00001,ko00002,ko01000	protein conserved in bacteria
PCFPDMBM_03522	2.82e-178	truC	5.4.99.26	-	J	ko:K06175	-	ko00000,ko01000,ko03016	Pseudouridine synthase
PCFPDMBM_03523	2.64e-103	yqcA	-	-	C	ko:K06205	-	ko00000	flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group
PCFPDMBM_03524	0.0	gudP	-	-	G	ko:K03535,ko:K12299	-	ko00000,ko02000	transporter
PCFPDMBM_03525	0.0	gudX	4.2.1.40	-	M	ko:K01706,ko:K13918	ko00053,ko01100,map00053,map01100	ko00000,ko00001,ko01000	Belongs to the mandelate racemase muconate lactonizing enzyme family
PCFPDMBM_03526	0.0	gudD	4.2.1.40	-	M	ko:K01706	ko00053,ko01100,map00053,map01100	ko00000,ko00001,ko01000	Belongs to the mandelate racemase muconate lactonizing enzyme family
PCFPDMBM_03527	5.19e-254	garK	2.7.1.165	-	G	ko:K00865	ko00260,ko00561,ko00630,ko01100,ko01120,ko01130,map00260,map00561,map00630,map01100,map01120,map01130	ko00000,ko00001,ko01000	Belongs to the glycerate kinase type-1 family
PCFPDMBM_03528	0.0	barA	2.7.13.3	-	T	ko:K07678	ko02020,ko02025,ko02026,ko05111,map02020,map02025,map02026,map05111	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
PCFPDMBM_03529	5.62e-310	rlmD	2.1.1.190	-	J	ko:K03215	-	ko00000,ko01000,ko03009	Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA
PCFPDMBM_03530	0.0	relA	2.7.6.5	-	KT	ko:K00951	ko00230,map00230	ko00000,ko00001,ko01000	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
PCFPDMBM_03531	6.34e-183	mazG	3.6.1.9	-	C	ko:K04765	ko00230,ko00240,ko00760,ko00770,ko01100,map00230,map00240,map00760,map00770,map01100	ko00000,ko00001,ko01000	nucleoside triphosphate pyrophosphohydrolase
PCFPDMBM_03532	0.0	pyrG	6.3.4.2	-	F	ko:K01937	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
PCFPDMBM_03533	7.21e-299	eno	4.2.1.11	-	G	ko:K01689	ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066	ko00000,ko00001,ko00002,ko01000,ko03019,ko04147	Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
PCFPDMBM_03534	5.13e-269	crtX	2.4.1.276	GT1	CG	ko:K14596	ko00906,map00906	ko00000,ko00001,ko01000,ko01003	Belongs to the UDP-glycosyltransferase family
PCFPDMBM_03535	1.06e-161	queE	4.3.99.3	-	H	ko:K10026	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko01000,ko03016	Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds
PCFPDMBM_03536	1.76e-276	norB	-	-	G	ko:K08170	-	ko00000,ko00002,ko01504,ko02000	Quinolone resistance protein
PCFPDMBM_03537	5.23e-266	-	3.5.1.32	-	S	ko:K01451	ko00360,map00360	ko00000,ko00001,ko01000,ko01002	amidohydrolase
PCFPDMBM_03538	0.0	-	-	-	K	-	-	-	helix_turn_helix, arabinose operon control protein
PCFPDMBM_03539	2.56e-87	queD	4.1.2.50, 4.2.3.12	-	H	ko:K01737	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000,ko03016	6-pyruvoyl tetrahydropterin synthase
PCFPDMBM_03540	0.0	cysJ	1.8.1.2	-	P	ko:K00380	ko00920,ko01100,ko01120,map00920,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
PCFPDMBM_03541	0.0	cysI	1.8.1.2	-	H	ko:K00381	ko00920,ko01100,ko01120,map00920,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate
PCFPDMBM_03542	8.71e-176	cysH	1.8.4.10, 1.8.4.8	-	EH	ko:K00390	ko00920,ko01100,ko01120,map00920,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Reduction of activated sulfate into sulfite
PCFPDMBM_03543	1.19e-234	iap	-	-	N	ko:K09612	-	ko00000,ko01000,ko01002	Catalyzes the sequential removal of 2 amino-terminal arginines from alkaline phosphatase isozyme 1 to form isozymes 2 and 3
PCFPDMBM_03545	9.35e-225	cysD	2.7.7.4	-	H	ko:K00957	ko00230,ko00261,ko00450,ko00920,ko01100,ko01120,ko01130,map00230,map00261,map00450,map00920,map01100,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Sulfate adenylyltransferase subunit 2
PCFPDMBM_03546	0.0	cysN	2.7.7.4	-	H	ko:K00956	ko00230,ko00261,ko00450,ko00920,ko01100,ko01120,ko01130,map00230,map00261,map00450,map00920,map01100,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN NodQ subfamily
PCFPDMBM_03547	3.87e-135	cysC	2.7.1.25	-	F	ko:K00860	ko00230,ko00920,ko01100,ko01120,map00230,map00920,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Catalyzes the synthesis of activated sulfate
PCFPDMBM_03548	7.23e-63	ygbE	-	-	S	-	-	-	membrane
PCFPDMBM_03549	1.01e-67	ftsB	-	-	D	ko:K05589	-	ko00000,ko03036	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
PCFPDMBM_03550	7.4e-164	ispD	2.7.7.60	-	I	ko:K00991	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP)
PCFPDMBM_03551	6.59e-111	ispF	4.6.1.12	-	H	ko:K01770	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP)
PCFPDMBM_03552	3.73e-241	truD	5.4.99.27	-	J	ko:K06176	-	ko00000,ko01000,ko03016	Responsible for synthesis of pseudouridine from uracil- 13 in transfer RNAs
PCFPDMBM_03553	7.51e-183	surE	3.1.3.5	-	S	ko:K03787	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
PCFPDMBM_03554	3.3e-144	pcm	2.1.1.77	-	J	ko:K00573	-	ko00000,ko01000	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
PCFPDMBM_03555	4.06e-203	nlpD	-	-	M	ko:K06194,ko:K12943	-	ko00000	Lysin motif
PCFPDMBM_03556	1.49e-226	rpoS	-	-	K	ko:K03087	ko02026,ko05111,map02026,map05111	ko00000,ko00001,ko03021	RNA polymerase sigma
PCFPDMBM_03557	3.17e-70	-	-	-	S	-	-	-	protein conserved in bacteria
PCFPDMBM_03558	5.17e-245	-	-	-	EGP	-	-	-	Major Facilitator Superfamily
PCFPDMBM_03559	1.15e-185	ptxR	-	-	K	-	-	-	LysR substrate binding domain
PCFPDMBM_03560	2.16e-84	hosA	-	-	K	ko:K22489	-	ko00000,ko03000	helix_turn_helix multiple antibiotic resistance protein
PCFPDMBM_03561	3.3e-131	pad1	2.5.1.129	-	H	ko:K03186	ko00130,ko00627,ko00940,ko01100,ko01110,ko01120,ko01220,map00130,map00627,map00940,map01100,map01110,map01120,map01220	ko00000,ko00001,ko00002,ko01000	Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for phenolic acid decarboxylase C. Involved in the decarboxylation and detoxification of phenolic derivatives under both aerobic and anaerobic conditions
PCFPDMBM_03562	0.0	vdcC	4.1.1.61	-	H	ko:K01612	ko00627,ko01120,ko01220,map00627,map01120,map01220	ko00000,ko00001,ko01000	Decarboxylase involved in the decarboxylation and detoxification of phenolic derivatives under both aerobic and anaerobic conditions. It is able to catalyze the reversible decarboxylation of 4-hydroxybenzoate and vanillate
PCFPDMBM_03563	4.44e-53	bsdD	4.1.1.61	-	S	ko:K21759	ko00627,ko01120,ko01220,map00627,map01120,map01220	ko00000,ko00001,ko01000	4-hydroxybenzoate decarboxylase
PCFPDMBM_03564	0.0	mutS	-	-	L	ko:K03555	ko03430,map03430	ko00000,ko00001,ko03400	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
PCFPDMBM_03565	1.47e-41	-	-	-	S	ko:K19048	-	ko00000,ko02048	Toxin SymE, type I toxin-antitoxin system
PCFPDMBM_03566	3.33e-78	ygbA	-	-	S	-	-	-	Nitrous oxide-stimulated promoter
PCFPDMBM_03567	1.67e-80	-	-	-	G	-	-	-	Phosphoenolpyruvate phosphomutase
PCFPDMBM_03568	2.27e-179	ogt	2.1.1.63	-	L	ko:K00567,ko:K10778	-	ko00000,ko01000,ko03000,ko03400	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
PCFPDMBM_03569	5.39e-274	-	-	-	EGP	-	-	-	transport system permease protein
PCFPDMBM_03570	2.28e-171	fecE	3.6.3.34	-	HP	ko:K02013	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	COG1120 ABC-type cobalamin Fe3 -siderophores transport systems, ATPase components
PCFPDMBM_03571	4.85e-219	-	-	-	P	ko:K02015	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PCFPDMBM_03572	6.33e-229	-	-	-	P	ko:K02016	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
PCFPDMBM_03574	0.0	ascB	3.2.1.21, 3.2.1.86	GT1	G	ko:K01223,ko:K05350	ko00010,ko00460,ko00500,ko00940,ko01100,ko01110,map00010,map00460,map00500,map00940,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
PCFPDMBM_03575	0.0	ascF	-	-	G	ko:K02752,ko:K02753,ko:K02755,ko:K02756,ko:K02757	ko00010,ko02060,map00010,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphotransferase System
PCFPDMBM_03576	2.67e-228	ascG	-	-	K	ko:K03487	-	ko00000,ko03000	Transcriptional regulator
PCFPDMBM_03577	0.0	-	-	-	S	-	-	-	bacterial-type RNA polymerase regulatory region sequence-specific DNA binding
PCFPDMBM_03578	1.39e-17	-	-	-	-	-	-	-	-
PCFPDMBM_03579	2.68e-255	norW	-	-	C	ko:K12265	ko05132,map05132	ko00000,ko00001,ko01000	One of at least two accessory proteins for anaerobic nitric oxide (NO) reductase. Reduces the rubredoxin moiety of NO reductase
PCFPDMBM_03580	0.0	norV	-	-	C	ko:K12264	ko05132,map05132	ko00000,ko00001	uses NADH to detoxify nitric oxide (NO), protecting several 4Fe-4S NO-sensitive enzymes. Has at least 2 reductase partners, only one of which (NorW, flavorubredoxin reductase) has been identified. NO probably binds to the di-iron center
PCFPDMBM_03581	0.0	norR	-	-	KT	ko:K12266	ko05132,map05132	ko00000,ko00001,ko03000	transcriptional regulator
PCFPDMBM_03582	2.04e-208	gutQ	5.3.1.13	-	M	ko:K02467	-	ko00000,ko01000	Arabinose 5-phosphate isomerase
PCFPDMBM_03583	5e-177	srlR	-	-	K	ko:K02468	-	ko00000,ko03000	DeoR C terminal sensor domain
PCFPDMBM_03584	1.68e-69	gutM	-	-	K	ko:K02466	-	ko00000	Glucitol operon activator
PCFPDMBM_03585	2.77e-175	srlD	1.1.1.140, 1.1.1.304, 1.1.1.76	-	IQ	ko:K00068,ko:K03366	ko00051,ko00650,map00051,map00650	ko00000,ko00001,ko01000	Belongs to the short-chain dehydrogenases reductases (SDR) family
PCFPDMBM_03586	4.44e-79	srlB	2.7.1.198	-	G	ko:K02781	ko00051,ko02060,map00051,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	system, glucitol sorbitol-specific
PCFPDMBM_03587	6.23e-218	srlE	2.7.1.198	-	G	ko:K02782,ko:K02783	ko00051,ko02060,map00051,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, glucitol sorbitol-specific, IIBC subunit
PCFPDMBM_03588	1.13e-127	srlA	-	-	G	ko:K02783	ko00051,ko02060,map00051,map02060	ko00000,ko00001,ko00002,ko02000	PTS system glucitol sorbitol-specific
PCFPDMBM_03589	1.36e-266	mltB	-	GH103	M	ko:K08305	-	ko00000,ko01000,ko01011	Lytic murein transglycosylase
PCFPDMBM_03590	4.94e-109	ygaD	3.5.1.42	-	J	ko:K03743	ko00760,map00760	ko00000,ko00001,ko01000	Belongs to the CinA family
PCFPDMBM_03591	6.99e-243	recA	-	-	L	ko:K03553	ko03440,map03440	ko00000,ko00001,ko00002,ko03400	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
PCFPDMBM_03592	5.72e-104	recX	-	-	S	ko:K03565	-	ko00000,ko03400	Modulates RecA activity
PCFPDMBM_03593	0.0	alaS	6.1.1.7	-	J	ko:K01872	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
PCFPDMBM_03594	7.45e-33	csrA	-	-	J	ko:K03563	ko02020,ko02025,ko02026,ko05111,map02020,map02025,map02026,map05111	ko00000,ko00001,ko03019	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
PCFPDMBM_03602	1.54e-130	yqaB	-	-	S	-	-	-	HAD-superfamily hydrolase, subfamily IA, variant 3
PCFPDMBM_03603	1.01e-71	yqaA	-	-	S	-	-	-	SNARE associated Golgi protein
PCFPDMBM_03604	0.0	gshA	6.3.2.2	-	H	ko:K01919	ko00270,ko00480,ko01100,map00270,map00480,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily
PCFPDMBM_03605	1.41e-120	luxS	4.4.1.21	-	H	ko:K07173	ko00270,ko01100,ko01230,ko02024,ko02026,ko05111,map00270,map01100,map01230,map02024,map02026,map05111	ko00000,ko00001,ko00002,ko01000	Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
PCFPDMBM_03607	1.29e-51	-	-	-	D	-	-	-	Domain amino terminal to FKBP-type peptidyl-prolyl isomerase
PCFPDMBM_03608	0.0	emrB	-	-	EGP	ko:K03446	-	ko00000,ko00002,ko02000	Major facilitator superfamily
PCFPDMBM_03609	5.18e-255	emrA	-	-	V	ko:K03543	-	ko00000,ko00002,ko02000	TIGRFAM efflux pump membrane protein
PCFPDMBM_03610	1.76e-121	mprA	-	-	K	ko:K15974	-	ko00000,ko00002,ko03000	Transcriptional
PCFPDMBM_03611	1.69e-246	ygaY	-	-	EGP	-	-	-	Major facilitator superfamily
PCFPDMBM_03612	1.59e-242	proX	-	-	E	ko:K02002	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	glycine, betaine
PCFPDMBM_03613	7.39e-219	proW	-	-	P	ko:K02001,ko:K02002	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	PFAM binding-protein-dependent transport systems inner membrane component
PCFPDMBM_03614	1.9e-278	proV	3.6.3.32	-	E	ko:K02000	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	glycine, betaine
PCFPDMBM_03615	5.82e-223	nrdF	1.17.4.1	-	F	ko:K00526	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PCFPDMBM_03616	0.0	nrdE	1.17.4.1	-	F	ko:K00525	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PCFPDMBM_03617	7.84e-92	nrdI	-	-	F	ko:K03647	-	ko00000	Probably involved in ribonucleotide reductase function
PCFPDMBM_03618	8.52e-41	nrdH	-	-	O	ko:K06191	-	ko00000	Glutaredoxin-like protein NrdH
PCFPDMBM_03619	1.55e-37	ygaM	-	-	S	-	-	-	Bacterial protein of unknown function (DUF883)
PCFPDMBM_03620	4.04e-79	ygaC	-	-	S	-	-	-	Protein of unknown function (DUF2002)
PCFPDMBM_03621	4.92e-99	alaE	-	-	U	-	-	-	L-alanine exporter AlaE
PCFPDMBM_03622	4.31e-70	stpA	-	-	S	ko:K03746,ko:K11685	-	ko00000,ko03036,ko03400	Belongs to the histone-like protein H-NS family
PCFPDMBM_03623	1.31e-32	-	-	-	-	-	-	-	-
PCFPDMBM_03624	5.37e-29	yqaE	-	-	S	-	-	-	Proteolipid membrane potential modulator
PCFPDMBM_03625	7.35e-221	yahB	-	-	K	-	-	-	Transcriptional regulator
PCFPDMBM_03626	1.92e-135	yahD	-	-	L	ko:K06867	-	ko00000	ankyrin repeat
PCFPDMBM_03627	0.0	yahF	-	-	C	-	-	-	Membrane protein FdrA
PCFPDMBM_03628	0.0	yahG	-	-	C	-	-	-	Protein of unknown function (DUF1116)
PCFPDMBM_03629	0.0	Z012_07875	-	-	F	ko:K06901	-	ko00000,ko02000	Psort location CytoplasmicMembrane, score 10.00
PCFPDMBM_03630	7.58e-217	yahI	2.7.2.2	-	E	ko:K00926	ko00220,ko00230,ko00910,ko01100,ko01120,ko01200,map00220,map00230,map00910,map01100,map01120,map01200	ko00000,ko00001,ko01000	Belongs to the carbamate kinase family
PCFPDMBM_03631	2.08e-315	yahJ	3.5.4.1	-	F	ko:K01485	ko00240,ko00330,ko01100,map00240,map00330,map01100	ko00000,ko00001,ko01000	Amidohydrolase family
PCFPDMBM_03632	1.92e-210	perR	-	-	K	ko:K03566	ko02026,map02026	ko00000,ko00001,ko03000	LysR substrate binding domain
PCFPDMBM_03633	3.89e-302	-	-	-	G	ko:K03535	-	ko00000,ko02000	Major Facilitator Superfamily
PCFPDMBM_03634	2.73e-161	IV02_09705	-	-	IQ	-	-	-	KR domain
PCFPDMBM_03635	1.3e-200	IV02_09715	2.2.1.1	-	G	ko:K00615	ko00030,ko00710,ko01051,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01051,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Transketolase, thiamine diphosphate binding domain
PCFPDMBM_03636	4.46e-229	IV02_09720	2.2.1.1	-	G	ko:K00615	ko00030,ko00710,ko01051,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01051,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Transketolase
PCFPDMBM_03637	2.94e-134	-	-	-	IQ	-	-	-	COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PCFPDMBM_03638	9.23e-207	-	-	-	K	-	-	-	transcriptional regulator
PCFPDMBM_03639	9.63e-124	pagC	-	-	M	ko:K07804	ko02020,map02020	ko00000,ko00001	Membrane
PCFPDMBM_03640	5.21e-56	-	-	-	-	-	-	-	-
PCFPDMBM_03641	4.5e-27	-	-	-	-	-	-	-	-
PCFPDMBM_03642	2.91e-38	-	-	-	-	-	-	-	-
PCFPDMBM_03643	1.45e-88	-	-	-	S	-	-	-	Immunity protein 63
PCFPDMBM_03644	1.17e-63	-	-	-	-	-	-	-	-
PCFPDMBM_03645	9.35e-74	-	-	-	-	-	-	-	-
PCFPDMBM_03646	5.84e-77	-	-	-	-	-	-	-	-
PCFPDMBM_03648	5.02e-62	-	-	-	U	-	-	-	domain, Protein
PCFPDMBM_03649	2.21e-63	-	-	-	S	-	-	-	Cell wall assembly protein
PCFPDMBM_03650	1.1e-38	-	-	-	-	-	-	-	-
PCFPDMBM_03651	1.89e-64	-	-	-	-	-	-	-	-
PCFPDMBM_03652	5.67e-59	-	-	-	-	-	-	-	-
PCFPDMBM_03653	8.81e-114	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2247)
PCFPDMBM_03654	0.0	fhaB	-	-	U	ko:K15125	ko05133,map05133	ko00000,ko00001,ko00536	Large exoproteins involved in heme utilization or adhesion
PCFPDMBM_03655	2.69e-128	hlyC	-	-	O	ko:K07389	ko05133,map05133	ko00000,ko00001,ko00002,ko01000	RTX toxin acyltransferase
PCFPDMBM_03656	0.0	fhaC	-	-	U	-	-	-	hemolysin activation secretion protein
PCFPDMBM_03657	5.71e-64	ydeI	-	-	S	-	-	-	single-species biofilm formation on inanimate substrate
PCFPDMBM_03658	9.12e-91	-	-	-	-	-	-	-	-
PCFPDMBM_03659	1.69e-86	-	-	-	S	-	-	-	Protein of unknown function (DUF421)
PCFPDMBM_03660	3.57e-116	ydeJ	-	-	S	-	-	-	Belongs to the CinA family
PCFPDMBM_03661	2.62e-173	-	-	-	S	-	-	-	Belongs to the short-chain dehydrogenases reductases (SDR) family
PCFPDMBM_03662	5.68e-234	cioB	1.10.3.14	-	C	ko:K00426	ko00190,ko01100,ko02020,map00190,map01100,map02020	ko00000,ko00001,ko00002,ko01000	oxidase subunit
PCFPDMBM_03663	0.0	cioA	1.10.3.14	-	C	ko:K00425	ko00190,ko01100,ko02020,map00190,map01100,map02020	ko00000,ko00001,ko00002,ko01000	oxidase, subunit
PCFPDMBM_03664	7.46e-200	-	-	-	P	ko:K07217	-	ko00000	Mn-containing catalase
PCFPDMBM_03665	1.85e-110	yciE	-	-	S	-	-	-	protein conserved in bacteria
PCFPDMBM_03666	1.04e-105	yciF	-	-	S	-	-	-	protein conserved in bacteria
PCFPDMBM_03667	4.38e-14	yciG	-	-	S	ko:K06884	-	ko00000	Stress-induced protein
PCFPDMBM_03668	2.4e-95	-	-	-	-	-	-	-	-
PCFPDMBM_03669	9.54e-62	yycE	3.4.21.26	-	E	ko:K01322	ko04614,map04614	ko00000,ko00001,ko01000,ko01002	PFAM Glyoxalase bleomycin resistance protein dioxygenase
PCFPDMBM_03670	4.55e-145	rluA_2	5.4.99.28, 5.4.99.29	-	J	ko:K06177	-	ko00000,ko01000,ko03009,ko03016	Pseudouridine synthase
PCFPDMBM_03671	2.17e-232	-	-	-	EGP	-	-	-	Major facilitator superfamily
PCFPDMBM_03672	1.67e-84	-	-	-	S	ko:K09936	ko02024,map02024	ko00000,ko00001,ko02000	protein conserved in bacteria
PCFPDMBM_03673	1.08e-86	-	-	-	S	ko:K09936	ko02024,map02024	ko00000,ko00001,ko02000	protein conserved in bacteria
PCFPDMBM_03674	1.32e-206	-	-	-	K	-	-	-	transcriptional regulator
PCFPDMBM_03675	1.05e-115	-	-	-	-	-	-	-	-
PCFPDMBM_03677	7.64e-112	-	-	-	K	-	-	-	transcriptional Regulator, LysR family
PCFPDMBM_03678	7.64e-204	-	-	-	G	ko:K02511	-	ko00000,ko02000	Major facilitator Superfamily
PCFPDMBM_03679	7.19e-134	-	-	-	G	-	-	-	Class II aldolase adducin family protein
PCFPDMBM_03680	4.94e-269	-	-	-	M	ko:K12542	-	ko00000,ko00002,ko02000,ko02044	Type I secretion membrane fusion protein, HlyD
PCFPDMBM_03681	0.0	-	-	-	V	ko:K12541	ko02010,map02010	ko00000,ko00001,ko00002,ko02000,ko02044	COG2274 ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
PCFPDMBM_03682	0.0	-	-	-	MU	ko:K12543	-	ko00000,ko00002,ko02000,ko02044	type I secretion outer membrane protein, TolC
PCFPDMBM_03683	0.0	-	-	-	U	ko:K20276	ko02024,map02024	ko00000,ko00001	Bacterial Ig-like domain (group 3)
PCFPDMBM_03684	0.0	-	-	-	NU	ko:K20276	ko02024,map02024	ko00000,ko00001	TIGRFAM Outer membrane protein
PCFPDMBM_03685	2.26e-101	-	-	-	S	-	-	-	Belongs to the UPF0312 family
PCFPDMBM_03686	1.01e-137	nanE	5.1.3.9	-	G	ko:K01788	ko00520,map00520	ko00000,ko00001,ko01000	Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
PCFPDMBM_03687	4.05e-221	-	-	-	C	-	-	-	Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily
PCFPDMBM_03688	1.83e-60	-	-	-	S	-	-	-	Antibiotic biosynthesis monooxygenase
PCFPDMBM_03690	5.2e-113	smpB	-	-	J	ko:K03664	-	ko00000	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
PCFPDMBM_03691	2.88e-96	ratA	-	-	I	-	-	-	oligoketide cyclase lipid transport protein
PCFPDMBM_03692	5.88e-52	rnfH	-	-	S	ko:K09801	-	ko00000	Belongs to the UPF0125 (RnfH) family
PCFPDMBM_03693	1.94e-72	bamE	-	-	M	ko:K06186	-	ko00000,ko02000	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
PCFPDMBM_03694	0.0	recN	-	-	L	ko:K03631	-	ko00000,ko03400	May be involved in recombinational repair of damaged DNA
PCFPDMBM_03695	3.91e-212	nadK	2.7.1.23	-	F	ko:K00858	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
PCFPDMBM_03696	1.2e-122	grpE	-	-	O	ko:K03687	-	ko00000,ko03029,ko03110	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
PCFPDMBM_03697	4.79e-274	yfjD	-	-	P	-	-	-	Mg2 and Co2 transporter CorB
PCFPDMBM_03698	5.28e-183	ypjD	-	-	S	-	-	-	Cytochrome c assembly protein
PCFPDMBM_03699	2.23e-313	ffh	3.6.5.4	-	U	ko:K03106	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko01000,ko02044	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components
PCFPDMBM_03700	1.34e-51	rpsP	-	-	J	ko:K02959	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Belongs to the bacterial ribosomal protein bS16 family
PCFPDMBM_03701	5.19e-127	rimM	-	-	J	ko:K02860	-	ko00000,ko03009	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
PCFPDMBM_03702	9.79e-183	trmD	2.1.1.228	-	J	ko:K00554	-	ko00000,ko01000,ko03016	Belongs to the RNA methyltransferase TrmD family
PCFPDMBM_03703	9.52e-74	rplS	-	-	J	ko:K02884	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
PCFPDMBM_03704	2.06e-80	-	-	-	P	-	-	-	Protein of unknown function (DUF2946)
PCFPDMBM_03705	1.57e-298	-	-	-	S	-	-	-	Iron-regulated membrane protein
PCFPDMBM_03706	8.99e-225	yfiN	2.7.7.65	-	T	ko:K20956,ko:K21021	ko02025,ko05111,map02025,map05111	ko00000,ko00001,ko01000	Diguanylate cyclase
PCFPDMBM_03707	3.78e-88	yfiR	-	-	S	-	-	-	bacterial-type flagellum-dependent swarming motility
PCFPDMBM_03708	3.32e-76	yfiL	-	-	S	-	-	-	Protein of unknown function (DUF2799)
PCFPDMBM_03709	3.16e-257	aroF	2.5.1.54	-	E	ko:K01626	ko00400,ko01100,ko01110,ko01130,ko01230,ko02024,map00400,map01100,map01110,map01130,map01230,map02024	ko00000,ko00001,ko00002,ko01000	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
PCFPDMBM_03710	5.27e-260	tyrA	1.3.1.12, 5.4.99.5	-	E	ko:K04517,ko:K14187	ko00400,ko00401,ko01100,ko01110,ko01130,ko01230,map00400,map00401,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	T-protein
PCFPDMBM_03711	1.95e-220	yvrE	-	-	G	ko:K14274	ko00040,map00040	ko00000,ko00001,ko01000	gluconolactonase
PCFPDMBM_03712	6.83e-274	pheA	4.2.1.51, 5.4.99.5	-	E	ko:K14170	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	chorismate mutase
PCFPDMBM_03713	9.98e-75	raiA	-	-	J	ko:K05809	-	ko00000,ko03009	Sigma 54 modulation protein ribosomal protein S30EA
PCFPDMBM_03714	1.23e-171	bamD	-	-	M	ko:K05807	-	ko00000,ko02000	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
PCFPDMBM_03715	2.05e-231	rluD	5.4.99.23	-	J	ko:K06180	-	ko00000,ko01000,ko03009	Responsible for synthesis of pseudouridine from uracil
PCFPDMBM_03716	6.83e-168	yfiH	-	-	S	ko:K05810	-	ko00000,ko01000	Belongs to the multicopper oxidase YfiH RL5 family
PCFPDMBM_03717	0.0	clpB	-	-	O	ko:K03695	ko04213,map04213	ko00000,ko00001,ko03110	Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
PCFPDMBM_03718	1.09e-153	yieP	-	-	K	-	-	-	transcriptional regulator
PCFPDMBM_03719	0.0	hsrA	-	-	EGP	-	-	-	Major facilitator superfamily
PCFPDMBM_03720	7.74e-232	rbsR	-	-	K	ko:K02529,ko:K03604	-	ko00000,ko03000	Is the main repressor of the genes involved in the de novo synthesis of purine nucleotides, regulating purB, purC, purEK, purF, purHD, purL, purMN and guaBA expression. PurR is allosterically activated to bind its cognate DNA by binding the purine corepressors, hypoxanthine or guanine, thereby effecting transcription repression
PCFPDMBM_03721	8.41e-193	rbsK	2.7.1.15	-	H	ko:K00852	ko00030,map00030	ko00000,ko00001,ko01000	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PCFPDMBM_03722	8e-198	rbsB	-	-	G	ko:K10439	ko02010,ko02030,map02010,map02030	ko00000,ko00001,ko00002,ko02000	Periplasmic
PCFPDMBM_03723	9.28e-205	rbsC	-	-	G	ko:K10440	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
PCFPDMBM_03724	0.0	rbsA	3.6.3.17	-	P	ko:K02056,ko:K10441,ko:K10542,ko:K10545,ko:K10562,ko:K17204	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	import. Responsible for energy coupling to the transport system
PCFPDMBM_03725	1.34e-89	rbsD	5.4.99.62	-	G	ko:K06726	ko02010,map02010	ko00000,ko00001,ko01000	Catalyzes the interconversion of beta-pyran and beta- furan forms of D-ribose
PCFPDMBM_03726	0.0	kup	-	-	P	ko:K03549	-	ko00000,ko02000	transport of potassium into the cell
PCFPDMBM_03727	0.0	ravA	-	-	S	ko:K03924	-	ko00000,ko01000	Functions as an ATPase. May play a role in metal insertion (metal-chelatase) or as a chaperone
PCFPDMBM_03728	0.0	viaA	-	-	S	-	-	-	VWA domain protein interacting with AAA ATPase
PCFPDMBM_03729	1.58e-237	asnA	6.3.1.1	-	E	ko:K01914	ko00250,ko00460,ko01100,ko01110,ko01230,map00250,map00460,map01100,map01110,map01230	ko00000,ko00001,ko01000	aspartate--ammonia ligase
PCFPDMBM_03730	1.92e-102	asnC	-	-	K	ko:K03718,ko:K03719	-	ko00000,ko03000,ko03036	transcriptional
PCFPDMBM_03731	3.75e-103	mioC	-	-	C	ko:K06205	-	ko00000	flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group
PCFPDMBM_03732	0.0	gidA	-	-	D	ko:K03495	-	ko00000,ko03016,ko03036	NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
PCFPDMBM_03733	2.32e-139	rsmG	2.1.1.170	-	J	ko:K03501	-	ko00000,ko01000,ko03009,ko03036	Specifically methylates the N7 position of guanine in position 527 of 16S rRNA
PCFPDMBM_03734	9.09e-73	atpI	-	-	C	ko:K02116	-	ko00000,ko00194	Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit I associates with the membrane and may be involved with cation translocation
PCFPDMBM_03735	2.8e-190	atpB	-	-	C	ko:K02108	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko03110	it plays a direct role in the translocation of protons across the membrane
PCFPDMBM_03736	2.29e-44	atpE	-	-	C	ko:K02110	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PCFPDMBM_03737	4.87e-82	atpF	-	-	C	ko:K02109	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
PCFPDMBM_03738	4.13e-116	atpH	-	-	C	ko:K02113	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PCFPDMBM_03739	0.0	atpA	3.6.3.14	-	C	ko:K02111	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko01000	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
PCFPDMBM_03740	3.14e-195	atpG	-	-	C	ko:K02115	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
PCFPDMBM_03741	0.0	atpD	3.6.3.14	-	C	ko:K02112	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko01000	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
PCFPDMBM_03742	5.68e-91	atpC	-	-	C	ko:K02114	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Produces ATP from ADP in the presence of a proton gradient across the membrane
PCFPDMBM_03743	0.0	pelX	4.2.2.9	-	M	ko:K01731	ko00040,map00040	ko00000,ko00001,ko01000	Parallel beta-helix repeats
PCFPDMBM_03744	0.0	glmU	2.3.1.157, 2.7.7.23	-	M	ko:K04042	ko00520,ko01100,ko01130,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
PCFPDMBM_03745	0.0	glmS	2.6.1.16	-	M	ko:K00820	ko00250,ko00520,ko01100,ko01130,ko04931,map00250,map00520,map01100,map01130,map04931	ko00000,ko00001,ko01000,ko01002	Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
PCFPDMBM_03746	2.36e-247	pstS	-	-	P	ko:K02040	ko02010,ko02020,ko05152,map02010,map02020,map05152	ko00000,ko00001,ko00002,ko02000	Part of the ABC transporter complex PstSACB involved in phosphate import
PCFPDMBM_03747	1.79e-217	pstC	-	-	P	ko:K02037	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	probably responsible for the translocation of the substrate across the membrane
PCFPDMBM_03748	1.33e-196	pstA	-	-	P	ko:K02038	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	phosphate transport system permease
PCFPDMBM_03749	1.39e-183	pstB	3.6.3.27	-	P	ko:K02036	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PCFPDMBM_03750	7.13e-169	phoU	-	-	P	ko:K02039	-	ko00000	Plays a role in the regulation of phosphate uptake
PCFPDMBM_03751	3.56e-226	yieL	-	-	P	ko:K07214	-	ko00000	Belongs to the glycosyl hydrolase 13 family
PCFPDMBM_03752	7.35e-158	yieH	-	-	S	-	-	-	HAD-superfamily hydrolase subfamily IA, variant 3
PCFPDMBM_03753	1.92e-287	purP	-	-	S	ko:K06901	-	ko00000,ko02000	PFAM Xanthine uracil vitamin C permease
PCFPDMBM_03754	1.17e-125	yieF	-	-	S	ko:K19784	-	ko00000	NAD(P)H-dependent FMN reductase
PCFPDMBM_03755	7.43e-154	yieE	-	-	H	-	-	-	Phosphopantetheinyl transferase
PCFPDMBM_03756	7.19e-232	yidZ	-	-	K	-	-	-	Involved in anaerobic NO protection
PCFPDMBM_03757	5.8e-239	mdtL	-	-	P	ko:K07552,ko:K08163	-	ko00000,ko02000	Multidrug resistance protein MdtL
PCFPDMBM_03758	2.15e-273	tnaB	-	-	E	ko:K03834,ko:K03835,ko:K03836	-	ko00000,ko02000	amino acid
PCFPDMBM_03759	0.0	tnaA	4.1.99.1	-	E	ko:K01667	ko00380,map00380	ko00000,ko00001,ko01000	Belongs to the beta-eliminating lyase family
PCFPDMBM_03760	9.16e-317	mnmE	-	-	J	ko:K03650	-	ko00000,ko01000,ko03016	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
PCFPDMBM_03761	0.0	yidC	-	-	U	ko:K03217	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044,ko03029	Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins
PCFPDMBM_03762	7.76e-72	rnpA	3.1.26.5	-	J	ko:K03536	-	ko00000,ko01000,ko03016	RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
PCFPDMBM_03763	0.0	dnaA	-	-	L	ko:K02313	ko02020,ko04112,map02020,map04112	ko00000,ko00001,ko03032,ko03036	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
PCFPDMBM_03764	1.91e-259	dnaN	2.7.7.7	-	L	ko:K02338	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
PCFPDMBM_03765	2.3e-255	recF	-	-	L	ko:K03629	ko03440,map03440	ko00000,ko00001,ko03400	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
PCFPDMBM_03766	0.0	gyrB	5.99.1.3	-	L	ko:K02470	-	ko00000,ko01000,ko03032,ko03400	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PCFPDMBM_03767	2.1e-180	yidA	-	-	S	-	-	-	HAD-superfamily hydrolase, subfamily IIB
PCFPDMBM_03768	5.42e-158	dgoR	-	-	K	ko:K19776	-	ko00000,ko03000	FCD domain
PCFPDMBM_03769	4.14e-198	dgoK	2.7.1.58	-	G	ko:K00883	ko00052,ko01100,map00052,map01100	ko00000,ko00001,ko00002,ko01000	2-keto-3-deoxy-galactonokinase
PCFPDMBM_03770	4.68e-138	dgoA	4.1.2.21	-	G	ko:K01631	ko00052,ko01100,map00052,map01100	ko00000,ko00001,ko00002,ko01000	KDPG and KHG aldolase
PCFPDMBM_03771	2.62e-285	dgoD	4.2.1.6	-	H	ko:K01684	ko00052,ko01100,ko01120,map00052,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Catalyzes the dehydration of D-galactonate to 2-keto-3- deoxy-D-galactonate
PCFPDMBM_03772	2.54e-311	dgoT	-	-	G	ko:K03535,ko:K08194	-	ko00000,ko02000	Major facilitator superfamily
PCFPDMBM_03773	9.51e-283	yidR	-	-	U	-	-	-	Biopolymer transporter Tol
PCFPDMBM_03774	1.8e-62	yidQ	-	-	S	-	-	-	Protein of unknown function (DUF1375)
PCFPDMBM_03775	5.74e-94	ibpA	-	-	O	ko:K04080	-	ko00000,ko03110	Associates with aggregated proteins, together with IbpB, to stabilize and protect them from irreversible denaturation and extensive proteolysis during heat shock and oxidative stress. Aggregated proteins bound to the IbpAB complex are more efficiently refolded and reactivated by the ATP-dependent chaperone systems ClpB and DnaK DnaJ GrpE. Its activity is ATP- independent
PCFPDMBM_03776	2.79e-97	ibpB	-	-	O	ko:K04081	-	ko00000,ko03110	Associates with aggregated proteins, together with IbpA, to stabilize and protect them from irreversible denaturation and extensive proteolysis during heat shock and oxidative stress. Aggregated proteins bound to the IbpAB complex are more efficiently refolded and reactivated by the ATP-dependent chaperone systems ClpB and DnaK DnaJ GrpE. Its activity is ATP- independent
PCFPDMBM_03777	0.0	yidE	-	-	U	ko:K07085	-	ko00000	transport protein
PCFPDMBM_03778	0.0	-	-	-	P	-	-	-	Sulfatase
PCFPDMBM_03779	4.05e-62	-	2.7.1.194	-	G	ko:K02822	ko00053,ko01100,ko01120,ko02060,map00053,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
PCFPDMBM_03780	3.83e-293	-	-	-	S	ko:K03475	ko00053,ko01100,ko01120,ko02060,map00053,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko02000	PTS system sugar-specific permease component
PCFPDMBM_03781	6.39e-248	-	2.8.2.22	-	S	ko:K01023	-	ko00000,ko01000	Arylsulfotransferase Ig-like domain
PCFPDMBM_03782	1.3e-71	yidH	-	-	S	ko:K00389	-	ko00000	Membrane
PCFPDMBM_03783	3.25e-72	yidG	-	-	S	-	-	-	Membrane
PCFPDMBM_03784	2.7e-208	-	-	-	C	ko:K06871	-	ko00000	Anaerobic sulfatase maturase
PCFPDMBM_03785	6.72e-286	dsdA	4.3.1.18	-	E	ko:K01753	ko00260,map00260	ko00000,ko00001,ko01000	Belongs to the serine threonine dehydratase family. DsdA subfamily
PCFPDMBM_03786	1.28e-252	emrD	-	-	EGP	ko:K07552,ko:K08154	-	ko00000,ko02000	Multidrug resistance protein D
PCFPDMBM_03787	3.21e-99	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
PCFPDMBM_03790	0.0	ilvB	2.2.1.6	-	H	ko:K01652	ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	acetolactate synthase
PCFPDMBM_03791	1.05e-63	ilvN	2.2.1.6	-	E	ko:K01653	ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	acetolactate synthase
PCFPDMBM_03792	2.52e-131	uhpA	-	-	K	ko:K07686,ko:K07689	ko02020,ko02025,ko02026,ko05111,map02020,map02025,map02026,map05111	ko00000,ko00001,ko00002,ko02022	Two component transcriptional regulator, LuxR family
PCFPDMBM_03793	0.0	uhpB	2.7.13.3	-	T	ko:K07675,ko:K20263	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Signal transduction histidine kinase
PCFPDMBM_03794	3.39e-310	uhpC	-	-	G	ko:K07783	ko02020,map02020	ko00000,ko00001,ko02000	PFAM Major facilitator superfamily
PCFPDMBM_03795	0.0	uhpT	-	-	G	ko:K07784	ko02020,map02020	ko00000,ko00001,ko02000	PFAM Major facilitator superfamily
PCFPDMBM_03796	6e-244	-	-	-	I	-	-	-	Alpha beta hydrolase
PCFPDMBM_03797	4.36e-98	yicN	-	-	S	-	-	-	Protein of unknown function (DUF1198)
PCFPDMBM_03798	5.17e-256	nepI	-	-	EGP	ko:K03445	-	ko00000,ko02000	Involved in the efflux of purine ribonucleosides, such as guanosine, adenosine and especially inosine. Involved in the resistance to 6-mercaptopurine
PCFPDMBM_03799	4.58e-195	yicL	-	-	EG	-	-	-	transporter
PCFPDMBM_03800	0.0	VVA0122	-	-	G	ko:K02024	-	ko00000,ko02000	Maltoporin (phage lambda and maltose receptor)
PCFPDMBM_03801	1.24e-62	chbA	2.7.1.196, 2.7.1.205	-	G	ko:K02759	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, cellobiose-specific IIA component
PCFPDMBM_03802	0.0	gmuD	3.2.1.21, 3.2.1.86	GT1	G	ko:K01223,ko:K05350	ko00010,ko00460,ko00500,ko00940,ko01100,ko01110,map00010,map00460,map00500,map00940,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
PCFPDMBM_03803	9.33e-309	celB	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PCFPDMBM_03804	3.63e-66	gmuB_1	2.7.1.196, 2.7.1.205	-	G	ko:K02760	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphotransferase system, lactose cellobiose-specific IIB subunit
PCFPDMBM_03805	8.25e-221	ascG_1	-	-	K	-	-	-	transcriptional regulator
PCFPDMBM_03806	8.86e-62	-	-	-	-	-	-	-	-
PCFPDMBM_03807	2.22e-88	-	-	-	S	-	-	-	Acetyltransferase (GNAT) domain
PCFPDMBM_03808	1.73e-140	-	-	-	K	-	-	-	Transcriptional regulator
PCFPDMBM_03809	0.0	-	-	-	P	-	-	-	Major facilitator superfamily
PCFPDMBM_03810	3.37e-180	nlpA	-	-	M	ko:K02073	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the nlpA lipoprotein family
PCFPDMBM_03811	2.66e-157	-	-	-	S	-	-	-	Beta-lactamase superfamily domain
PCFPDMBM_03812	9.56e-199	adpA	-	-	K	-	-	-	DJ-1/PfpI family
PCFPDMBM_03813	4.63e-253	-	-	-	S	-	-	-	AAA ATPase domain
PCFPDMBM_03814	1.28e-226	ybgA	-	-	S	-	-	-	Conserved Protein
PCFPDMBM_03815	5.1e-88	hiuH	3.5.2.17	-	S	ko:K07127	ko00230,ko01100,ko01120,map00230,map01100,map01120	ko00000,ko00001,ko00002,ko01000,ko02000	Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily
PCFPDMBM_03816	3.95e-164	ycgE	-	-	K	ko:K21089,ko:K21972,ko:K22491	ko02026,map02026	ko00000,ko00001,ko03000	helix_turn_helix, mercury resistance
PCFPDMBM_03817	1.02e-119	blc	-	-	M	ko:K03098	-	ko00000,ko04147	Outer Membrane Lipoprotein
PCFPDMBM_03818	5.95e-218	-	-	-	-	-	-	-	-
PCFPDMBM_03819	2.38e-54	-	-	-	-	-	-	-	-
PCFPDMBM_03820	2.38e-27	proV	3.6.3.32	-	K	ko:K02000	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	sequence-specific DNA binding
PCFPDMBM_03821	3.63e-90	yjaB	-	-	K	ko:K03827	-	ko00000,ko01000	Acetyltransferase (GNAT) domain
PCFPDMBM_03822	1.71e-180	-	-	-	K	-	-	-	AraC-like ligand binding domain
PCFPDMBM_03823	0.0	bglB	3.2.1.21	GH3	G	ko:K05349	ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 3 family
PCFPDMBM_03824	5.23e-273	-	-	-	G	ko:K03292	-	ko00000	transporter
PCFPDMBM_03825	6.81e-58	-	-	-	S	ko:K19048	-	ko00000,ko02048	Toxin SymE, type I toxin-antitoxin system
PCFPDMBM_03826	1.26e-34	-	-	-	S	-	-	-	protein encoded in hypervariable junctions of pilus gene clusters
PCFPDMBM_03829	2.81e-35	-	-	-	E	-	-	-	IrrE N-terminal-like domain
PCFPDMBM_03830	1.16e-50	-	-	-	S	-	-	-	Beta protein
PCFPDMBM_03833	0.0	yicJ	-	-	G	ko:K03292	-	ko00000	COG2211 Na melibiose symporter and related transporters
PCFPDMBM_03834	0.0	yicI	3.2.1.177	GH31	G	ko:K01811	-	ko00000,ko01000	Belongs to the glycosyl hydrolase 31 family
PCFPDMBM_03835	0.0	yicH	-	-	M	-	-	-	AsmA Family
PCFPDMBM_03836	6.32e-309	xanP	-	-	F	ko:K03458,ko:K16345	-	ko00000,ko02000	xanthine
PCFPDMBM_03837	1.59e-254	gltS	-	-	P	ko:K03312	-	ko00000,ko02000	Catalyzes the sodium-dependent transport of glutamate
PCFPDMBM_03838	0.0	recG	3.6.4.12	-	L	ko:K03655	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
PCFPDMBM_03839	8.04e-150	trmH	2.1.1.34	-	J	ko:K00556	-	ko00000,ko01000,ko03016	Catalyzes the 2'-O methylation of guanosine at position 18 in tRNA
PCFPDMBM_03840	0.0	spoT	2.7.6.5, 3.1.7.2	-	KT	ko:K00951,ko:K01139	ko00230,map00230	ko00000,ko00001,ko01000,ko03009	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
PCFPDMBM_03841	1.08e-52	rpoZ	2.7.7.6	-	K	ko:K03060	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
PCFPDMBM_03842	7.21e-143	MAGI3	2.7.4.8, 3.1.3.48	-	F	ko:K00942,ko:K05629,ko:K05631,ko:K06112,ko:K16667,ko:K20307	ko00230,ko01100,ko04015,ko04530,ko05165,map00230,map01100,map04015,map04530,map05165	ko00000,ko00001,ko00002,ko01000,ko01009,ko04131,ko04516	Guanylate kinase
PCFPDMBM_03843	0.0	ligB	6.5.1.2	-	L	ko:K01972	ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430	ko00000,ko00001,ko01000,ko03032,ko03400	Catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction
PCFPDMBM_03844	4.62e-129	yicG	-	-	S	-	-	-	Membrane
PCFPDMBM_03845	1.5e-136	-	-	-	I	-	-	-	Acyltransferase family
PCFPDMBM_03846	2.89e-191	yicC	-	-	S	-	-	-	Stress-induced protein
PCFPDMBM_03847	7.09e-163	rph	2.7.7.56	-	J	ko:K00989	-	ko00000,ko01000,ko03016	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
PCFPDMBM_03848	2.06e-145	pyrE	2.4.2.10	-	F	ko:K00762	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
PCFPDMBM_03849	1.11e-128	slmA	-	-	D	ko:K05501	-	ko00000,ko03000,ko03036	Required for nucleoid occlusion (NO) phenomenon, which prevents Z-ring formation and cell division over the nucleoid. Acts as a DNA-associated cell division inhibitor that binds simultaneously chromosomal DNA and FtsZ, and disrupts the assembly of FtsZ polymers. SlmA-DNA-binding sequences (SBS) are dispersed on non-Ter regions of the chromosome, preventing FtsZ polymerization at these regions
PCFPDMBM_03850	9.49e-103	dut	3.6.1.23	-	F	ko:K01520	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA
PCFPDMBM_03851	3.38e-274	coaBC	4.1.1.36, 6.3.2.5	-	H	ko:K13038	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
PCFPDMBM_03852	3.73e-136	radC	-	-	E	ko:K03630	-	ko00000	Belongs to the UPF0758 family
PCFPDMBM_03853	3.96e-49	rpmB	-	-	J	ko:K02902	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL28 family
PCFPDMBM_03854	6.8e-31	rpmG	-	-	J	ko:K02913	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc
PCFPDMBM_03855	9.11e-195	fpg	3.2.2.23, 4.2.99.18	-	L	ko:K10563	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
PCFPDMBM_03856	1.23e-106	coaD	2.7.7.3	-	H	ko:K00954	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
PCFPDMBM_03857	4.96e-172	waaE	-	GT2	S	ko:K12984	-	ko00000,ko01000,ko01003,ko01005,ko02000	PFAM Glycosyl transferase, family 2
PCFPDMBM_03858	3.44e-300	kdtA	2.4.99.12, 2.4.99.13, 2.4.99.14, 2.4.99.15	GT30	M	ko:K02527	ko00540,ko01100,map00540,map01100	ko00000,ko00001,ko00002,ko01000,ko01003,ko01005	Transferase
PCFPDMBM_03859	0.0	Z012_09105	-	-	S	-	-	-	Sulfatase
PCFPDMBM_03860	1.58e-238	-	-	-	M	-	-	-	transferase activity, transferring glycosyl groups
PCFPDMBM_03861	2.82e-234	hyaD	-	-	M	-	-	-	Glycosyl transferase, family 2
PCFPDMBM_03862	6.12e-288	-	-	-	S	-	-	-	O-Antigen ligase
PCFPDMBM_03863	1.04e-247	walR	-	-	M	-	-	-	glycosyl transferase group 1
PCFPDMBM_03864	6.12e-257	rfaG	-	GT4	M	ko:K02844	ko00540,ko01100,map00540,map01100	ko00000,ko00001,ko00002,ko01000,ko01003,ko01005	Catalyzes the addition of the first glucose residue to the LPS core
PCFPDMBM_03865	6.48e-267	rfaQ	-	GT9	M	ko:K02849	ko00540,ko01100,map00540,map01100	ko00000,ko00001,ko00002,ko01000,ko01003,ko01005	heptosyltransferase
PCFPDMBM_03866	3.01e-227	rfaC	-	GT9	M	ko:K02841	ko00540,ko01100,map00540,map01100	ko00000,ko00001,ko00002,ko01000,ko01003,ko01005	PFAM glycosyl transferase family 9
PCFPDMBM_03867	3.81e-254	rfaF	-	GT9	M	ko:K02843	ko00540,ko01100,map00540,map01100	ko00000,ko00001,ko00002,ko01000,ko01003,ko01005	heptosyltransferase
PCFPDMBM_03868	1.05e-226	hldD	5.1.3.20	-	GM	ko:K03274	ko00540,ko01100,map00540,map01100	ko00000,ko00001,ko00002,ko01000,ko01005	Catalyzes the interconversion between ADP-D-glycero- beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose
PCFPDMBM_03869	3.74e-284	kbl	2.3.1.29	-	H	ko:K00639	ko00260,map00260	ko00000,ko00001,ko01000,ko01007	Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide
PCFPDMBM_03870	1.55e-254	tdh	1.1.1.103	-	C	ko:K00060	ko00260,map00260	ko00000,ko00001,ko01000	Catalyzes the NAD( )-dependent oxidation of L-threonine to 2-amino-3-ketobutyrate
PCFPDMBM_03871	1.32e-179	-	-	-	M	-	-	-	COG0463 Glycosyltransferases involved in cell wall biogenesis
PCFPDMBM_03872	3.18e-210	yibQ	-	-	S	ko:K09798	-	ko00000	protein conserved in bacteria
PCFPDMBM_03873	7.13e-230	envC	-	-	D	-	-	-	Peptidase family M23
PCFPDMBM_03874	0.0	gpmI	5.4.2.12	-	G	ko:K15633	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PCFPDMBM_03875	3.25e-92	yibN	2.8.1.1, 2.8.1.2	-	P	ko:K01011	ko00270,ko00920,ko01100,ko01120,ko04122,map00270,map00920,map01100,map01120,map04122	ko00000,ko00001,ko01000	rhodanese-related sulfurtransferase
PCFPDMBM_03876	2.2e-55	grxC	-	-	O	ko:K03676	-	ko00000,ko03110	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
PCFPDMBM_03877	5.68e-110	secB	-	-	U	ko:K03071	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044,ko03110	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
PCFPDMBM_03878	5.26e-236	gpsA	1.1.1.94	-	I	ko:K00057	ko00564,ko01110,map00564,map01110	ko00000,ko00001,ko01000	Glycerol-3-phosphate dehydrogenase
PCFPDMBM_03879	1.15e-192	cysE	2.3.1.30	-	E	ko:K00640	ko00270,ko00920,ko01100,ko01110,ko01120,ko01200,ko01230,ko05111,map00270,map00920,map01100,map01110,map01120,map01200,map01230,map05111	ko00000,ko00001,ko00002,ko01000	serine acetyltransferase
PCFPDMBM_03880	1.23e-107	trmL	2.1.1.207	-	J	ko:K03216	-	ko00000,ko01000,ko03016	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
PCFPDMBM_03881	6.66e-281	lldD	1.1.2.3	-	C	ko:K00101	ko00620,ko01100,map00620,map01100	ko00000,ko00001,ko01000	Catalyzes the conversion of L-lactate to pyruvate. Is coupled to the respiratory chain
PCFPDMBM_03882	3.88e-167	lldR	-	-	K	ko:K14348	-	ko00000,ko03000	FCD
PCFPDMBM_03883	0.0	lldP	-	-	C	ko:K00427,ko:K03303	-	ko00000,ko02000	L-lactate permease
PCFPDMBM_03884	3e-68	yibL	-	-	S	ko:K14762	-	ko00000,ko03009	Protein of unknown function (DUF2810)
PCFPDMBM_03885	5.73e-130	mtlR	-	-	K	ko:K02562	-	ko00000,ko03000	Mannitol repressor
PCFPDMBM_03886	2.23e-261	mtlD	1.1.1.17	-	C	ko:K00009	ko00051,map00051	ko00000,ko00001,ko01000	Mannitol-1-Phosphate 5-Dehydrogenase
PCFPDMBM_03887	0.0	mtlA	2.7.1.197	-	G	ko:K02798,ko:K02799,ko:K02800	ko00051,ko02060,map00051,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system mannitol-specific
PCFPDMBM_03888	2.59e-77	yibI	-	-	S	-	-	-	Protein of unknown function (DUF3302)
PCFPDMBM_03889	1.95e-253	yibH	-	-	V	-	-	-	secretion protein HlyD family
PCFPDMBM_03890	5.68e-133	yibF	2.5.1.18	-	O	ko:K00799	ko00480,ko00980,ko00982,ko00983,ko01524,ko05200,ko05204,ko05225,ko05418,map00480,map00980,map00982,map00983,map01524,map05200,map05204,map05225,map05418	ko00000,ko00001,ko01000,ko02000	Glutathione S-Transferase
PCFPDMBM_03891	1.18e-296	selA	2.9.1.1	-	J	ko:K01042	ko00450,ko00970,map00450,map00970	ko00000,ko00001,ko01000	Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis
PCFPDMBM_03892	0.0	selB	-	-	J	ko:K03833	-	ko00000,ko03012	Translation elongation factor
PCFPDMBM_03893	5.83e-195	bglK	2.7.1.2, 2.7.1.4, 2.7.1.85	-	GK	ko:K00845,ko:K00847,ko:K18673	ko00010,ko00051,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00051,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	ROK family
PCFPDMBM_03894	0.0	aldB	-	-	C	ko:K00138	ko00010,ko00620,ko01100,ko01110,ko01120,map00010,map00620,map01100,map01110,map01120	ko00000,ko00001,ko01000	belongs to the aldehyde dehydrogenase family
PCFPDMBM_03895	1.66e-199	yiaU	-	-	K	-	-	-	Transcriptional regulator
PCFPDMBM_03896	1.32e-146	yiaT	-	-	M	ko:K07274	-	ko00000,ko02000	MltA-interacting protein
PCFPDMBM_03897	0.0	-	-	-	S	ko:K09955	-	ko00000	protein conserved in bacteria
PCFPDMBM_03898	0.0	-	-	-	G	ko:K03292	-	ko00000	COG2211 Na melibiose symporter and related transporters
PCFPDMBM_03899	6.73e-178	yisR	-	-	K	-	-	-	transcriptional regulator
PCFPDMBM_03900	4.82e-98	yiaI	-	-	C	ko:K05796	-	ko00000	Electron transport protein
PCFPDMBM_03901	1.95e-312	avtA	2.6.1.66	-	E	ko:K00835	ko00290,ko01100,ko01110,ko01130,map00290,map01100,map01110,map01130	ko00000,ko00001,ko01000,ko01007	Valine--pyruvate aminotransferase
PCFPDMBM_03902	0.0	malS	3.2.1.1	GH13	G	ko:K01176	ko00500,ko01100,ko04973,map00500,map01100,map04973	ko00000,ko00001,ko01000	alpha-amylase
PCFPDMBM_03903	1.87e-132	bax	-	GH73	S	ko:K03796	-	ko00000	FlgJ-related protein
PCFPDMBM_03904	9.12e-282	xylR	-	-	K	ko:K02529	-	ko00000,ko03000	transcriptional regulator
PCFPDMBM_03905	2.96e-251	xylH	-	-	G	ko:K10544,ko:K10547	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
PCFPDMBM_03906	0.0	xylG	3.6.3.17	-	P	ko:K02056,ko:K10441,ko:K10542,ko:K10545,ko:K10562,ko:K17204	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	import. Responsible for energy coupling to the transport system
PCFPDMBM_03907	7.7e-229	xylF	-	-	G	ko:K10543	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	D-xylose ABC transporter periplasmic substrate-binding protein
PCFPDMBM_03908	0.0	xylA	5.3.1.5	-	G	ko:K01805	ko00040,ko00051,ko01100,map00040,map00051,map01100	ko00000,ko00001,ko01000	Belongs to the xylose isomerase family
PCFPDMBM_03909	0.0	xylB	2.7.1.17	-	G	ko:K00854	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko00002,ko01000	xylulose kinase
PCFPDMBM_03910	2.37e-90	yiaA	-	-	S	-	-	-	Membrane
PCFPDMBM_03911	1.88e-225	wecH	-	-	S	-	-	-	Responsible for the incorporation of O-acetyl groups into the enterobacterial common antigen (ECA) trisaccharide repeat units
PCFPDMBM_03912	3.72e-55	ysaB	-	-	S	-	-	-	YsaB-like lipoprotein
PCFPDMBM_03913	2.21e-228	glyQ	6.1.1.14	-	J	ko:K01878	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	glycyl-tRNA synthetase alpha subunit
PCFPDMBM_03914	0.0	glyS	6.1.1.14	-	J	ko:K01879	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Glycyl-tRNA synthetase beta subunit
PCFPDMBM_03915	0.0	ydiF	-	-	S	-	-	-	ATPase components of ABC transporters with duplicated ATPase domains
PCFPDMBM_03916	3.65e-60	yiaG	-	-	K	ko:K07726	-	ko00000,ko03000	transcriptional regulator
PCFPDMBM_03917	7.95e-159	yiaF	-	-	S	-	-	-	exported protein
PCFPDMBM_03918	2.97e-45	cspA	-	-	K	ko:K03704	-	ko00000,ko03000	Cold shock
PCFPDMBM_03919	3.49e-222	ghrB	1.1.1.215, 1.1.1.43, 1.1.1.79, 1.1.1.81	-	CH	ko:K00032,ko:K00090	ko00030,ko00260,ko00480,ko00620,ko00630,ko01100,ko01110,ko01120,map00030,map00260,map00480,map00620,map00630,map01100,map01110,map01120	ko00000,ko00001,ko01000	Catalyzes the NADPH-dependent reduction of glyoxylate and hydroxypyruvate into glycolate and glycerate, respectively
PCFPDMBM_03920	4.27e-311	kguT	-	-	G	-	-	-	Major facilitator superfamily
PCFPDMBM_03921	8.96e-203	kguK	2.7.1.13, 2.7.1.45	-	G	ko:K00874,ko:K11441	ko00030,ko01100,ko01120,ko01200,map00030,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	2-dehydro-3-deoxygluconokinase
PCFPDMBM_03922	3.41e-155	kguE	-	-	G	-	-	-	Xylose isomerase domain protein TIM barrel
PCFPDMBM_03923	3.83e-233	ptxS	-	-	K	ko:K02525	-	ko00000,ko03000	transcriptional regulator
PCFPDMBM_03924	2.77e-126	yiaD	-	-	M	ko:K12216	-	ko00000,ko02044	Belongs to the ompA family
PCFPDMBM_03925	0.0	bisC	1.7.2.3, 1.8.5.3, 1.97.1.9	-	C	ko:K07306,ko:K07309,ko:K07812,ko:K08351	ko00450,ko00780,ko00920,ko01100,map00450,map00780,map00920,map01100	ko00000,ko00001,ko01000,ko02000	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
PCFPDMBM_03926	1.59e-99	yiaC	-	-	K	ko:K03826	-	ko00000,ko01000	acetyltransferase
PCFPDMBM_03927	1.26e-136	tag	3.2.2.20	-	L	ko:K01246	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	glycosylase
PCFPDMBM_03928	1.05e-155	yhjY	-	-	N	-	-	-	outer membrane autotransporter
PCFPDMBM_03930	1.64e-240	yhjX	-	-	P	ko:K08177	-	ko00000,ko02000	Major facilitator superfamily
PCFPDMBM_03931	0.0	eptB	2.7.8.42, 2.7.8.43	-	S	ko:K03760,ko:K12975,ko:K19353	ko00540,ko01503,map00540,map01503	ko00000,ko00001,ko00002,ko01000,ko01005	membrane-associated metal-dependent hydrolase
PCFPDMBM_03933	0.0	dppA	-	-	E	ko:K02035,ko:K12368	ko02010,ko02024,ko02030,map02010,map02024,map02030	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding proteins, family 5 Middle
PCFPDMBM_03934	2.39e-234	dppB	-	-	P	ko:K12369,ko:K19227	ko01503,ko02010,map01503,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PCFPDMBM_03935	1.59e-178	dppC	-	-	P	ko:K12370	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC-type dipeptide oligopeptide nickel transport systems, permease components
PCFPDMBM_03936	1.81e-224	dppD	-	-	P	ko:K02031,ko:K12371,ko:K15583	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
PCFPDMBM_03937	1.79e-242	dppF	-	-	P	ko:K10823,ko:K12372,ko:K19230	ko01501,ko01503,ko02010,ko02024,map01501,map01503,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
PCFPDMBM_03938	1.52e-219	coaA	2.7.1.33	-	F	ko:K00867	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Pantothenic acid kinase
PCFPDMBM_03945	1.91e-183	yhdZ	3.6.3.21	-	E	ko:K02028,ko:K02029,ko:K09972,ko:K10004,ko:K10010,ko:K10038	ko02010,ko02020,map02010,map02020	ko00000,ko00001,ko00002,ko01000,ko02000	(ABC) transporter
PCFPDMBM_03946	2.23e-258	yhdY	-	-	P	ko:K02029,ko:K09971,ko:K10002,ko:K10037	ko02010,ko02020,map02010,map02020	ko00000,ko00001,ko00002,ko02000	amino acid ABC transporter
PCFPDMBM_03947	8.7e-260	aapQ	-	-	P	ko:K09970	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	amino acid ABC transporter
PCFPDMBM_03948	3.46e-242	aapJ	-	-	ET	ko:K09969	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the bacterial solute-binding protein 3 family
PCFPDMBM_03949	2.49e-43	yhdV	-	-	S	-	-	-	Protein involved in biological_process
PCFPDMBM_03950	0.0	acrB	-	-	V	ko:K18138,ko:K18142	ko01501,ko01503,map01501,map01503	ko00000,ko00001,ko00002,ko01504,ko02000	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PCFPDMBM_03951	1.3e-247	acrE	-	-	M	ko:K03585,ko:K18141	ko01501,ko01503,map01501,map01503	ko00000,ko00001,ko00002,ko01504,ko02000,ko03036	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PCFPDMBM_03952	1.23e-112	envR	-	-	K	ko:K03577,ko:K18140	-	ko00000,ko00002,ko01504,ko03000	acrEF envCD operon
PCFPDMBM_03953	0.0	ydcR	2.7.7.65	-	T	ko:K21023	ko02025,map02025	ko00000,ko00001,ko01000	Diguanylate cyclase
PCFPDMBM_03954	2.59e-30	yhdU	-	-	S	-	-	-	Protein of unknown function (DUF2556)
PCFPDMBM_03955	1.79e-61	fis	-	-	K	ko:K03557	ko05111,map05111	ko00000,ko00001,ko03000,ko03036,ko03400	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
PCFPDMBM_03956	4.61e-206	dusB	-	-	H	ko:K05540	-	ko00000,ko01000,ko03016	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PCFPDMBM_03957	3.83e-139	cah	4.2.1.1	-	P	ko:K01674	ko00910,map00910	ko00000,ko00001,ko01000	Eukaryotic-type carbonic anhydrase
PCFPDMBM_03958	9.95e-211	prmA	-	-	J	ko:K02687	-	ko00000,ko01000,ko03009	Ribosomal protein L11 methyltransferase
PCFPDMBM_03959	2.23e-315	panF	-	-	H	ko:K14392	-	ko00000,ko02000	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
PCFPDMBM_03960	4.35e-52	yhdT	-	-	S	-	-	-	Membrane
PCFPDMBM_03961	0.0	accC	6.3.4.14, 6.4.1.2	-	I	ko:K01961	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002,ko01000	Biotin carboxylase
PCFPDMBM_03962	1.18e-98	accB	-	-	I	ko:K02160	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002	first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
PCFPDMBM_03963	2.74e-101	aroQ	4.2.1.10	-	E	ko:K03786	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes a trans-dehydration via an enolate intermediate
PCFPDMBM_03964	6.43e-133	msrQ	-	-	C	ko:K17247	-	ko00000	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain
PCFPDMBM_03965	6.75e-245	msrP	-	-	C	ko:K07147	-	ko00000,ko01000	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
PCFPDMBM_03966	1.09e-225	yhdH	-	-	C	ko:K19745	ko00640,ko01100,map00640,map01100	ko00000,ko00001,ko01000	COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases
PCFPDMBM_03967	0.0	csrD	-	-	T	ko:K18765	-	ko00000,ko03019	GGDEF domain
PCFPDMBM_03968	4.74e-243	mreB	-	-	D	ko:K03569	-	ko00000,ko02048,ko03036,ko04812	rod shape-determining protein MreB
PCFPDMBM_03969	5.22e-231	mreC	-	-	M	ko:K03570	-	ko00000,ko03036	Involved in formation and maintenance of cell shape
PCFPDMBM_03970	2.28e-108	mreD	-	-	M	ko:K03571	-	ko00000,ko03036	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
PCFPDMBM_03971	8.78e-130	yhdE	-	-	D	ko:K06287	-	ko00000	Maf-like protein
PCFPDMBM_03972	0.0	rng	-	-	J	ko:K08301	-	ko00000,ko01000,ko03009,ko03019	Involved in the processing of the 5'-end of 16S rRNA
PCFPDMBM_03973	0.0	yhdP	-	-	D	-	-	-	Membrane
PCFPDMBM_03974	0.0	tldD	-	-	S	ko:K03568	-	ko00000,ko01002	'responsible for the proteolytic maturation of the E. coli pMccB17 plasmid-encoded microcin B17, an exported protein that targets the essential topoisomerase II DNA gyrase
PCFPDMBM_03975	2.11e-213	aaeR	-	-	K	ko:K21698	-	ko00000,ko03000	Transcriptional regulator
PCFPDMBM_03976	3.73e-40	aaeX	-	-	S	ko:K21695	-	ko00000	the gene is a member of the aaeXAB operon
PCFPDMBM_03977	2.06e-207	aaeA	-	-	V	ko:K15548	-	ko00000,ko02000	P-hydroxybenzoic acid efflux pump subunit AaeA
PCFPDMBM_03978	0.0	aaeB	-	-	U	ko:K03468	-	ko00000,ko02000	Forms an efflux pump with AaeA. Could function as a metabolic relief valve, allowing to eliminate certain compounds when they accumulate to high levels in the cell
PCFPDMBM_03979	0.0	gabD	1.2.1.16, 1.2.1.20, 1.2.1.79	-	C	ko:K00135	ko00250,ko00310,ko00350,ko00650,ko00760,ko01100,ko01120,map00250,map00310,map00350,map00650,map00760,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Belongs to the aldehyde dehydrogenase family
PCFPDMBM_03980	4.78e-53	yhcO	-	-	K	ko:K03623	-	ko00000	inhibitor
PCFPDMBM_03981	2.41e-43	yhcN	-	-	S	-	-	-	Protein of unknown function (DUF1471)
PCFPDMBM_03982	9.06e-32	yhcN	-	-	S	-	-	-	Protein of unknown function (DUF1471)
PCFPDMBM_03983	1.05e-101	argR	-	-	K	ko:K03402	-	ko00000,ko03000	Regulates arginine biosynthesis genes
PCFPDMBM_03984	3.88e-213	mdh	1.1.1.37	-	C	ko:K00024	ko00020,ko00270,ko00620,ko00630,ko00680,ko00710,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00270,map00620,map00630,map00680,map00710,map00720,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible oxidation of malate to oxaloacetate
PCFPDMBM_03985	3.18e-243	degS	-	-	O	ko:K04691,ko:K04772	-	ko00000,ko01000,ko01002	Periplasmic serine protease DegS
PCFPDMBM_03986	4.91e-288	degQ	1.3.1.74, 3.4.21.107	-	M	ko:K04771,ko:K04772,ko:K08070	ko01503,ko02020,map01503,map02020	ko00000,ko00001,ko00002,ko01000,ko01002,ko03110	Belongs to the peptidase S1C family
PCFPDMBM_03987	2.46e-84	yhcB	-	-	S	ko:K09908	-	ko00000	Cytochrome D ubiquinol oxidase, subunit
PCFPDMBM_03988	5.45e-258	zapE	-	-	D	ko:K06916	-	ko00000,ko03036	Reduces the stability of FtsZ polymers in the presence of ATP
PCFPDMBM_03989	2.49e-100	rplM	-	-	J	ko:K02871	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
PCFPDMBM_03990	1.43e-82	rpsI	-	-	J	ko:K02996	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uS9 family
PCFPDMBM_03991	8.77e-151	sspA	-	-	O	ko:K03599	-	ko00000,ko02000,ko03021	Belongs to the GST superfamily
PCFPDMBM_03992	1.15e-106	sspB	-	-	S	ko:K03600	-	ko00000,ko03021	stringent starvation protein b
PCFPDMBM_03993	0.0	gltD	1.4.1.13, 1.4.1.14	-	C	ko:K00266	ko00250,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00250,map00910,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko01000	Glutamate synthase
PCFPDMBM_03994	0.0	gltB	1.4.1.13, 1.4.1.14	-	E	ko:K00265	ko00250,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00250,map00910,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko01000	Glutamate synthase
PCFPDMBM_03995	2.68e-218	yhcC	-	-	S	ko:K07139	-	ko00000	radical SAM protein
PCFPDMBM_03996	0.0	yjgR	-	-	S	ko:K06915	-	ko00000	Domain of unknown function DUF87
PCFPDMBM_03997	0.0	dhaK	2.7.1.121, 2.7.1.28, 2.7.1.29, 4.6.1.15	-	G	ko:K00863,ko:K05878	ko00051,ko00561,ko00680,ko01100,ko01120,ko01200,ko04622,map00051,map00561,map00680,map01100,map01120,map01200,map04622	ko00000,ko00001,ko00002,ko01000	Dihydroxyacetone kinase
PCFPDMBM_03998	1.94e-247	yjgB	-	-	S	ko:K12957	-	ko00000,ko01000	alcohol dehydrogenase
PCFPDMBM_03999	5.92e-102	yjgM	-	-	K	ko:K03828	-	ko00000,ko01000	Acetyltransferase
PCFPDMBM_04000	1.88e-78	yjgN	-	-	S	-	-	-	Bacterial protein of unknown function (DUF898)
PCFPDMBM_04001	0.0	valS	6.1.1.9	-	J	ko:K01873	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
PCFPDMBM_04002	2.14e-102	holC	2.7.7.7	-	L	ko:K02339	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III chi subunit
PCFPDMBM_04003	0.0	pepA	3.4.11.1	-	E	ko:K01255	ko00480,ko01100,map00480,map01100	ko00000,ko00001,ko01000,ko01002	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
PCFPDMBM_04004	3.3e-240	lptF	-	-	S	ko:K07091	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Permease
PCFPDMBM_04005	3.72e-242	lptG	-	-	S	ko:K11720	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	permease
PCFPDMBM_04006	0.0	arcB	2.7.13.3	-	T	ko:K07648	ko02020,ko02026,map02020,map02026	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
PCFPDMBM_04007	1.36e-136	elbB	-	-	Q	-	-	-	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
PCFPDMBM_04008	8.56e-161	mtgA	2.4.1.129	GT51	M	ko:K03814	ko00550,map00550	ko00000,ko00001,ko01000,ko01003,ko01011	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
PCFPDMBM_04009	6.29e-56	ptsO	-	-	G	ko:K08485,ko:K11189	ko02060,map02060	ko00000,ko00001,ko02000	Phosphotransferase System
PCFPDMBM_04010	1.03e-203	rapZ	-	-	S	ko:K06958	-	ko00000,ko03019	Modulates the synthesis of GlmS, by affecting the processing and stability of the regulatory small RNA GlmZ. When glucosamine-6-phosphate (GlcN6P) concentrations are high in the cell, RapZ binds GlmZ and targets it to cleavage by RNase E. Consequently, GlmZ is inactivated and unable to activate GlmS synthesis. Under low GlcN6P concentrations, RapZ is sequestered and inactivated by an other regulatory small RNA, GlmY, preventing GlmZ degradation and leading to synthesis of GlmS
PCFPDMBM_04011	9.6e-106	ptsN	-	-	G	ko:K02806	ko02060,map02060	ko00000,ko00001,ko01000,ko02000	PTS IIA-like nitrogen-regulatory protein PtsN
PCFPDMBM_04012	5.86e-61	yhbH	-	-	J	ko:K05808	-	ko00000,ko03009	sigma (54) modulation protein
PCFPDMBM_04013	0.0	rpoN	-	-	K	ko:K03092	ko02020,ko05111,map02020,map05111	ko00000,ko00001,ko03021	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
PCFPDMBM_04014	4.12e-168	lptB	-	-	S	ko:K06861	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	abc transporter atp-binding protein
PCFPDMBM_04015	4.63e-118	lptA	-	-	T	ko:K09774	-	ko00000,ko02000	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
PCFPDMBM_04016	8.85e-127	lptC	-	-	S	ko:K11719	-	ko00000,ko02000	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. Facilitates the transfer of LPS from the inner membrane to the periplasmic protein LptA. Could be a docking site for LptA
PCFPDMBM_04017	8.57e-128	kdsC	3.1.3.45	-	S	ko:K03270	ko00540,ko01100,map00540,map01100	ko00000,ko00001,ko00002,ko01000,ko01005	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
PCFPDMBM_04018	2.02e-223	kdsD	5.3.1.13	-	M	ko:K06041	ko00540,ko01100,map00540,map01100	ko00000,ko00001,ko00002,ko01000,ko01005	Arabinose 5-phosphate isomerase
PCFPDMBM_04019	1.68e-209	yrbG	-	-	P	ko:K07301	-	ko00000,ko02000	antiporter
PCFPDMBM_04020	7.99e-185	mlaF	-	-	Q	ko:K02065	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	(ABC) transporter
PCFPDMBM_04021	4.75e-172	mlaE	-	-	Q	ko:K02066	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG0767 ABC-type transport system involved in resistance to organic solvents, permease component
PCFPDMBM_04022	7.08e-121	mlaD	-	-	Q	ko:K02067	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC-type transport system involved in resistance to organic solvents periplasmic component
PCFPDMBM_04023	7.14e-143	mlaC	-	-	Q	ko:K07323	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC-type transport system involved in resistance to organic solvents auxiliary component
PCFPDMBM_04024	1.86e-42	mlaB	-	-	S	ko:K04749,ko:K07122	ko02010,map02010	ko00000,ko00001,ko00002,ko02000,ko03021	NTP binding protein (Contains STAS domain)
PCFPDMBM_04025	7.94e-54	yrbA	-	-	K	-	-	-	Belongs to the BolA IbaG family
PCFPDMBM_04026	3.54e-295	murA	2.5.1.7	-	M	ko:K00790	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Belongs to the EPSP synthase family. MurA subfamily
PCFPDMBM_04027	6.65e-60	sfsB	-	-	K	ko:K07724	-	ko00000,ko03000	transcriptional regulator
PCFPDMBM_04028	6.52e-222	ispB	2.5.1.90	-	H	ko:K02523	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	Belongs to the FPP GGPP synthase family
PCFPDMBM_04029	2.89e-67	rplU	-	-	J	ko:K02888	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein binds to 23S rRNA in the presence of protein L20
PCFPDMBM_04030	5.13e-55	rpmA	-	-	J	ko:K02899	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL27 family
PCFPDMBM_04031	4.36e-216	yhbE	-	-	EG	-	-	-	EamA-like transporter family
PCFPDMBM_04032	8.77e-263	obg	-	-	S	ko:K03979	-	ko00000,ko01000,ko03009	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
PCFPDMBM_04033	5.92e-221	basS	2.7.13.3	-	T	ko:K07643,ko:K07645	ko01503,ko02020,ko02024,map01503,map02020,map02024	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Signal transduction histidine kinase
PCFPDMBM_04034	2.58e-147	basR	-	-	T	ko:K07771	ko01503,ko02020,map01503,map02020	ko00000,ko00001,ko00002,ko02022	Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PCFPDMBM_04035	0.0	dacB	3.4.16.4	-	M	ko:K07259	ko00550,map00550	ko00000,ko00001,ko01000,ko01002,ko01011	D-alanyl-D-alanine carboxypeptidase
PCFPDMBM_04036	1.09e-104	greA	-	-	K	ko:K03624	-	ko00000,ko03021	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PCFPDMBM_04037	6.09e-70	yhbY	-	-	J	ko:K07574	-	ko00000,ko03009	RNA-binding protein containing KH domain possibly ribosomal protein
PCFPDMBM_04038	2.41e-144	ftsJ	2.1.1.166	-	J	ko:K02427	-	ko00000,ko01000,ko03009	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
PCFPDMBM_04039	0.0	ftsH	-	-	O	ko:K03798	-	ko00000,ko00002,ko01000,ko01002,ko03110	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
PCFPDMBM_04040	1.44e-193	folP	2.5.1.15	-	H	ko:K00796	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
PCFPDMBM_04041	1.21e-315	glmM	5.4.2.10	-	G	ko:K03431	ko00520,ko01100,ko01130,map00520,map01100,map01130	ko00000,ko00001,ko01000	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
PCFPDMBM_04042	2.21e-63	secG	-	-	U	ko:K03075	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Preprotein translocase, subunit SecG
PCFPDMBM_04044	0.0	argG	6.3.4.5	-	E	ko:K01940	ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,ko05418,map00220,map00250,map01100,map01110,map01130,map01230,map05418	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the argininosuccinate synthase family. Type
PCFPDMBM_04046	1.55e-105	rimP	-	-	J	ko:K09748	-	ko00000,ko03009	Required for maturation of 30S ribosomal subunits
PCFPDMBM_04047	0.0	nusA	-	-	K	ko:K02600	-	ko00000,ko03009,ko03021	Participates in both transcription termination and antitermination
PCFPDMBM_04048	0.0	infB	-	-	J	ko:K02519	-	ko00000,ko03012,ko03029	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
PCFPDMBM_04049	7.3e-82	rbfA	-	-	J	ko:K02834	-	ko00000,ko03009	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
PCFPDMBM_04050	8.54e-218	truB	5.4.99.25	-	J	ko:K03177	-	ko00000,ko01000,ko03016	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
PCFPDMBM_04051	2.79e-54	rpsO	-	-	J	ko:K02956	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
PCFPDMBM_04053	0.0	pnp	2.7.7.8	-	J	ko:K00962	ko00230,ko00240,ko03018,map00230,map00240,map03018	ko00000,ko00001,ko00002,ko01000,ko03016,ko03019	Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction
PCFPDMBM_04054	1.03e-208	nlpI	-	-	S	ko:K05803	-	ko00000	May be involved in cell division
PCFPDMBM_04055	0.0	deaD	3.6.4.13	-	JKL	ko:K05592	ko03018,map03018	ko00000,ko00001,ko01000,ko03009,ko03019	DEAD-box RNA helicase involved in
PCFPDMBM_04056	1.66e-286	mtr	-	-	E	ko:K03834,ko:K03835,ko:K03836	-	ko00000,ko02000	amino acid
PCFPDMBM_04057	1.53e-242	yhbW	-	-	C	-	-	-	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
PCFPDMBM_04058	4.38e-209	yhbV	-	-	O	-	-	-	protease
PCFPDMBM_04059	3.3e-235	yhbU	-	-	O	ko:K08303	ko05120,map05120	ko00000,ko00001,ko01000,ko01002	Peptidase U32
PCFPDMBM_04060	1.1e-114	yhbT	-	-	I	-	-	-	lipid carrier protein
PCFPDMBM_04061	1.79e-112	yhbS	-	-	S	ko:K03824	-	ko00000,ko01000	N-acetyltransferase
PCFPDMBM_04062	1.28e-102	yhbP	-	-	S	ko:K09979	-	ko00000	Belongs to the UPF0306 family
PCFPDMBM_04063	1.51e-111	yhbO	3.5.1.124	-	S	ko:K05520	-	ko00000,ko01000,ko01002	intracellular protease
PCFPDMBM_04064	3.53e-142	yraR	-	-	GM	-	-	-	Nucleoside-diphosphate-sugar epimerases
PCFPDMBM_04065	2.5e-117	yraP	-	-	S	-	-	-	Periplasmic or secreted lipoprotein
PCFPDMBM_04066	1.59e-136	diaA	5.3.1.28	-	G	ko:K03271,ko:K12961	ko00540,ko01100,map00540,map01100	ko00000,ko00001,ko00002,ko01000,ko01005,ko03036	Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate
PCFPDMBM_04067	3.12e-82	yraN	-	-	L	ko:K07460	-	ko00000	Belongs to the UPF0102 family
PCFPDMBM_04068	0.0	lpoA	-	-	M	ko:K07121	-	ko00000	Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1A (PBP1a)
PCFPDMBM_04069	3.57e-201	rsmI	2.1.1.198	-	H	ko:K07056	-	ko00000,ko01000,ko03009	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
PCFPDMBM_04070	2.22e-187	-	-	-	K	-	-	-	filamentation induced by cAMP
PCFPDMBM_04071	0.0	garD	4.2.1.42	-	G	ko:K01708	ko00053,map00053	ko00000,ko00001,ko01000	Catalyzes the dehydration of galactarate to form 5- dehydro-4-deoxy-D-glucarate
PCFPDMBM_04072	7.76e-314	garP	-	-	G	ko:K03535,ko:K12299	-	ko00000,ko02000	transporter
PCFPDMBM_04073	2.13e-182	garL	4.1.2.20	-	G	ko:K01630	ko00053,map00053	ko00000,ko00001,ko01000	Belongs to the HpcH HpaI aldolase family
PCFPDMBM_04074	5.88e-200	garR	1.1.1.31, 1.1.1.60	-	I	ko:K00020,ko:K00042	ko00280,ko00630,ko01100,map00280,map00630,map01100	ko00000,ko00001,ko01000	Catalyzes the reduction of tatronate semialdehyde to D- glycerate
PCFPDMBM_04075	1.2e-260	glxK	2.7.1.165	-	G	ko:K00865	ko00260,ko00561,ko00630,ko01100,ko01120,ko01130,map00260,map00561,map00630,map01100,map01120,map01130	ko00000,ko00001,ko01000	Belongs to the glycerate kinase type-1 family
PCFPDMBM_04076	3.12e-292	yhaO	-	-	E	-	-	-	Serine transporter
PCFPDMBM_04077	1.12e-262	yhaM	-	-	S	-	-	-	Belongs to the UPF0597 family
PCFPDMBM_04078	1.14e-161	yhaK	-	-	S	ko:K06911	-	ko00000	Belongs to the pirin family
PCFPDMBM_04079	2.72e-206	yhaJ	-	-	K	-	-	-	transcriptional regulator
PCFPDMBM_04080	7.63e-85	yhaH	-	-	S	-	-	-	Membrane
PCFPDMBM_04081	8.93e-252	yqjG	1.8.5.7	-	O	ko:K07393	-	ko00000,ko01000	Glutathione S-Transferase
PCFPDMBM_04082	6.32e-86	yqjF	-	-	S	ko:K15977	-	ko00000	membrane
PCFPDMBM_04083	7.87e-47	yqjK	-	-	S	-	-	-	Membrane
PCFPDMBM_04084	3.29e-63	yqjE	-	-	S	-	-	-	Membrane
PCFPDMBM_04085	4.82e-47	yqjD	-	-	S	-	-	-	Membrane protein YqjD
PCFPDMBM_04086	3e-53	yqjC	-	-	S	-	-	-	Protein of unknown function (DUF1090)
PCFPDMBM_04087	6.7e-70	mzrA	-	-	S	-	-	-	Modulates the activity of the EnvZ OmpR two-component regulatory system, probably by directly modulating EnvZ enzymatic activity and increasing stability of phosphorylated OmpR
PCFPDMBM_04088	1.62e-150	yqjA	-	-	S	-	-	-	Inner membrane protein yqjA
PCFPDMBM_04089	2.49e-182	exuR	-	-	K	ko:K05799,ko:K19775	-	ko00000,ko03000	Transcriptional
PCFPDMBM_04090	1.84e-299	exuT	-	-	G	ko:K07783,ko:K08191	ko02020,map02020	ko00000,ko00001,ko02000	Major facilitator superfamily
PCFPDMBM_04091	0.0	uxaC	5.3.1.12	-	G	ko:K01812	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko00002,ko01000	glucuronate isomerase
PCFPDMBM_04092	0.0	uxaA	4.2.1.7	-	G	ko:K01685	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the dehydration of galactarate to form 5- dehydro-4-deoxy-D-glucarate
PCFPDMBM_04093	8.62e-261	sstT	-	-	E	ko:K07862	-	ko00000,ko02000	Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
PCFPDMBM_04094	7.21e-214	alx	-	-	P	ko:K05794	-	ko00000	membrane protein, terc
PCFPDMBM_04095	1.33e-230	ygjR	-	-	S	ko:K22230	ko00562,ko01120,map00562,map01120	ko00000,ko00001,ko01000	oxidoreductase
PCFPDMBM_04096	3.34e-117	ygjP	-	-	S	ko:K07043	-	ko00000	WLM domain
PCFPDMBM_04097	7.38e-274	rlmG	2.1.1.172, 2.1.1.174	-	J	ko:K00564,ko:K11391	-	ko00000,ko01000,ko03009	Specifically methylates the guanine in position 1835 (m2G1835) of 23S rRNA
PCFPDMBM_04098	0.0	fadH	1.3.1.34	-	C	ko:K00219	-	ko00000,ko01000	PFAM NADH flavin oxidoreductase NADH oxidase
PCFPDMBM_04099	0.0	lsrK	2.7.1.17, 2.7.1.189	-	G	ko:K00854,ko:K11216	ko00040,ko01100,ko02024,map00040,map01100,map02024	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of autoinducer-2 (AI-2) to phospho-AI-2, which subsequently inactivates the transcriptional regulator LsrR and leads to the transcription of the lsr operon. Phosphorylates the ring-open form of (S)-4,5-dihydroxypentane-2,3- dione (DPD), which is the precursor to all AI-2 signaling molecules, at the C5 position
PCFPDMBM_04100	5.25e-212	lsrR	-	-	K	ko:K11531	ko02024,ko02026,map02024,map02026	ko00000,ko00001,ko03000	transcriptional regulator
PCFPDMBM_04101	0.0	lsrA	-	-	P	ko:K10558	ko02010,ko02024,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Part of the ABC transporter complex LsrABCD involved in autoinducer 2 (AI-2) import. Responsible for energy coupling to the transport system
PCFPDMBM_04102	4.35e-221	lsrC	-	-	U	ko:K10556	ko02010,ko02024,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
PCFPDMBM_04103	7.04e-207	lsrD	-	-	U	ko:K10557	ko02010,ko02024,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
PCFPDMBM_04104	1.18e-229	lsrB	-	-	G	ko:K10555	ko02010,ko02024,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Part of the ABC transporter complex LsrABCD involved in autoinducer 2 (AI-2) import. Binds AI-2 and delivers it to the LsrC and LsrD permeases
PCFPDMBM_04105	1.36e-209	lsrF	2.3.1.245, 4.1.2.13	-	G	ko:K08321,ko:K11645	ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko02024,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map02024	ko00000,ko00001,ko00002,ko01000	Involved in the degradation of phospho-AI-2, thereby terminating induction of the lsr operon and closing the AI-2 signaling cycle. Catalyzes the transfer of an acetyl moiety from 3-hydroxy-5-phosphonooxypentane-2,4-dione to CoA to form glycerone phosphate and acetyl-CoA
PCFPDMBM_04106	5.79e-62	lsrG	5.3.1.32	-	S	ko:K11530	ko02024,map02024	ko00000,ko00001,ko01000	Involved in the degradation of phospho-AI-2, thereby terminating induction of the lsr operon and closing the AI-2 signaling cycle. Catalyzes the conversion of (4S)-4-hydroxy-5- phosphonooxypentane-2,3-dione (P-DPD) to 3-hydroxy-5- phosphonooxypentane-2,4-dione (P-HPD)
PCFPDMBM_04107	0.0	patA	2.6.1.11, 2.6.1.17, 2.6.1.82	-	H	ko:K00821,ko:K09251	ko00220,ko00300,ko00330,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00220,map00300,map00330,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Catalyzes the aminotransferase reaction from putrescine to 2-oxoglutarate, leading to glutamate and 4-aminobutanal, which spontaneously cyclizes to form 1-pyrroline. Is also able to transaminate cadaverine and, in lower extent, spermidine, but not ornithine
PCFPDMBM_04108	2.55e-293	aer	-	-	T	ko:K03406,ko:K03776	ko02020,ko02030,map02020,map02030	ko00000,ko00001,ko02035	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
PCFPDMBM_04109	6.81e-264	cheM	-	-	NT	ko:K03406,ko:K05875	ko02020,ko02030,map02020,map02030	ko00000,ko00001,ko02035	Four helix bundle sensory module for signal transduction
PCFPDMBM_04110	9.53e-108	yqjI	-	-	K	-	-	-	transcriptional regulator
PCFPDMBM_04111	4.63e-176	yqjH	1.16.1.9	-	P	ko:K07229	-	ko00000,ko01000	Siderophore-interacting protein
PCFPDMBM_04112	2.17e-251	-	-	-	I	-	-	-	Heat shock protein
PCFPDMBM_04113	1.43e-76	-	-	-	S	-	-	-	Cellulose biosynthesis protein BcsO
PCFPDMBM_04114	3.69e-189	yhjQ	-	-	D	-	-	-	cellulose synthase operon protein YhjQ
PCFPDMBM_04115	0.0	bcsA	2.4.1.12	GT2	M	ko:K00694	ko00500,ko01100,ko02026,map00500,map01100,map02026	ko00000,ko00001,ko01000,ko01003,ko02000	Cellulose synthase
PCFPDMBM_04116	0.0	bcsB	-	-	NU	ko:K20541	-	ko00000,ko02000	cellulose synthase
PCFPDMBM_04117	0.0	-	-	-	O	ko:K20543	-	ko00000,ko02000	Cellulose synthase operon protein C C-terminus (BCSC_C)
PCFPDMBM_04118	6.89e-102	bcsD	-	-	S	-	-	-	cellulose synthase
PCFPDMBM_04119	2.07e-237	bcsZ	3.2.1.4	GH5,GH8,GH9	G	ko:K01179,ko:K20542	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 8 (cellulase D) family
PCFPDMBM_04120	4.94e-49	-	-	-	-	-	-	-	-
PCFPDMBM_04122	5.53e-60	int	-	-	L	-	-	-	Phage integrase family
PCFPDMBM_04123	1.03e-46	-	-	-	L	ko:K07483	-	ko00000	Transposase and inactivated derivatives
PCFPDMBM_04126	1.49e-246	-	-	-	L	-	-	-	Arm DNA-binding domain
PCFPDMBM_04127	0.0	alsT	-	-	E	ko:K03310	-	ko00000	alanine symporter
PCFPDMBM_04128	1.26e-205	phoH	-	-	T	ko:K06217	-	ko00000	PhoH-like protein
PCFPDMBM_04129	3.9e-303	ycdB	-	-	P	ko:K16301	-	ko00000,ko01000,ko02000	peroxidase
PCFPDMBM_04130	2.8e-256	efeO	-	-	P	ko:K07224	-	ko00000,ko02000	periplasmic lipoprotein involved in iron transport
PCFPDMBM_04131	1.49e-188	efeU	-	-	P	ko:K07243	-	ko00000,ko02000	PFAM Iron permease FTR1
PCFPDMBM_04132	1.81e-257	nupC	-	-	F	ko:K03317,ko:K11535	-	ko00000,ko02000	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
PCFPDMBM_04133	2.51e-94	-	-	-	J	-	-	-	Protein of unknown function (DUF3574)
PCFPDMBM_04134	0.0	putP	-	-	E	ko:K11928	-	ko00000,ko02000	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
PCFPDMBM_04135	0.0	putA	1.2.1.88, 1.5.5.2	-	C	ko:K13821	ko00250,ko00330,ko01100,ko01110,ko01130,map00250,map00330,map01100,map01110,map01130	ko00000,ko00001,ko01000,ko03000	Oxidizes proline to glutamate for use as a carbon and nitrogen source
PCFPDMBM_04136	2.65e-74	-	-	-	S	-	-	-	Lysozyme inhibitor LprI
PCFPDMBM_04137	1.01e-140	rutR	-	-	K	ko:K09017	-	ko00000,ko03000	transcriptional regulator
PCFPDMBM_04138	5.08e-262	rutA	1.14.99.46	-	C	ko:K09018	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	Catalyzes the pyrimidine ring opening between N-3 and C- 4 by an unusual flavin hydroperoxide-catalyzed mechanism to yield ureidoacrylate peracid. It cleaves pyrmidine rings directly by adding oxygen atoms, making a toxic ureidoacrylate peracid product which can be spontaneously reduced to ureidoacrylate
PCFPDMBM_04139	4.29e-160	rutB	3.5.1.110	-	Q	ko:K09020	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	In vivo, quickly hydrolyzes the ureidoacrylate peracid to avoid toxicity, but can also hydrolyzes ureidoacrylate that is formed spontaneously from ureidoacrylate peracid. One of the products of hydrolysis, carbamate, hydrolyzes spontaneously, thereby releasing one of the pyrimidine rings nitrogen atoms as ammonia and one of its carbons as CO2
PCFPDMBM_04140	1.97e-88	rutC	3.5.99.10	-	J	ko:K09021,ko:K09022	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	May reduce aminoacrylate peracid to aminoacrylate. Required to remove a toxic intermediate produce by the pyrimidine nitrogen degradation
PCFPDMBM_04141	3.73e-174	rutD	-	-	F	ko:K09023	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	May increase the rate of spontaneous hydrolysis of aminoacrylate to malonic semialdehyde. Required to remove a toxic intermediate produce in the pyrimidine nitrogen degradation
PCFPDMBM_04142	7.88e-137	rutE	-	-	C	ko:K09019	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	May reduce toxic product malonic semialdehyde to 3- hydroxypropionic acid, which is excreted
PCFPDMBM_04143	7.94e-114	rutF	-	-	C	ko:K09024	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	Catalyzes the reduction of FMN to FMNH2 which is used to reduce pyrimidine by RutA via the Rut pathway
PCFPDMBM_04144	6.65e-284	uraA	-	-	F	ko:K02824,ko:K09016	-	ko00000,ko02000	Xanthine uracil
PCFPDMBM_04145	1.61e-186	yedA	-	-	EG	-	-	-	of the drug metabolite transporter (DMT) superfamily
PCFPDMBM_04146	2.95e-133	wrbA	1.6.5.2	-	S	ko:K03809	ko00130,ko01110,map00130,map01110	ko00000,ko00001,ko01000	Belongs to the WrbA family
PCFPDMBM_04147	4.95e-44	yccJ	-	-	S	-	-	-	YccJ-like protein
PCFPDMBM_04148	1.13e-288	agp	3.1.3.10	-	S	ko:K01085	ko00010,ko01120,map00010,map01120	ko00000,ko00001,ko01000	Acid phosphatase
PCFPDMBM_04149	2.5e-90	-	-	-	K	-	-	-	transcriptional regulator
PCFPDMBM_04150	6.6e-115	-	-	-	S	ko:K09958	-	ko00000	50S ribosomal protein L21
PCFPDMBM_04152	6.76e-125	-	-	-	K	-	-	-	transcriptional regulator
PCFPDMBM_04153	3.65e-91	-	-	-	S	-	-	-	Domain of unknown function (DUF4865)
PCFPDMBM_04154	7.98e-75	-	-	-	S	-	-	-	tautomerase
PCFPDMBM_04155	2.13e-60	-	4.1.1.44	-	I	ko:K01607	ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220	ko00000,ko00001,ko01000	decarboxylase
PCFPDMBM_04156	1.38e-166	dgdR	-	-	K	-	-	-	transcriptional regulator
PCFPDMBM_04157	0.0	leuA	2.3.3.13	-	E	ko:K01649	ko00290,ko00620,ko01100,ko01110,ko01210,ko01230,map00290,map00620,map01100,map01110,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
PCFPDMBM_04158	6.91e-167	-	-	-	K	-	-	-	AraC family transcriptional regulator
PCFPDMBM_04159	2.37e-101	-	-	-	S	-	-	-	YcxB-like protein
PCFPDMBM_04161	1.72e-114	-	-	-	S	-	-	-	HTH domain
PCFPDMBM_04162	5.08e-145	-	-	-	S	-	-	-	phenazine biosynthesis protein PhzF
PCFPDMBM_04163	6.56e-16	-	-	-	U	ko:K03297	-	ko00000,ko02000	Small multidrug resistance protein
PCFPDMBM_04164	2.9e-10	ebrA	-	-	U	ko:K11814	-	ko00000,ko00002,ko02000	COG2076 Membrane transporters of cations and cationic drugs
PCFPDMBM_04165	0.0	pflB	2.3.1.54, 4.3.99.4	-	C	ko:K00656,ko:K20038	ko00620,ko00640,ko00650,ko01100,ko01120,map00620,map00640,map00650,map01100,map01120	ko00000,ko00001,ko01000	Glycine radical enzyme that catalyzes the cleavage of a C-N bond in choline, producing trimethylamine (TMA) and acetaldehyde
PCFPDMBM_04166	1.21e-98	cutD	-	-	C	ko:K20037	-	ko00000,ko01000	Catalyzes activation of the choline trimethylamine-lyase CutC under anaerobic conditions by generation of an organic free radical on a glycine residue, via an homolytic cleavage of S- adenosyl-L-methionine (SAM)
PCFPDMBM_04168	1.21e-36	ygdR	-	-	S	-	-	-	(Lipo)protein
PCFPDMBM_04170	1.44e-199	yghA	-	-	IQ	-	-	-	Dehydrogenases with different specificities (Related to short-chain alcohol dehydrogenases)
PCFPDMBM_04171	6.64e-129	-	-	-	D	-	-	-	Membrane
PCFPDMBM_04172	0.0	-	-	-	T	-	-	-	Diguanylate cyclase
PCFPDMBM_04173	3.72e-99	-	-	-	S	-	-	-	Oxidoreductase molybdopterin binding domain
PCFPDMBM_04174	2.61e-100	-	-	-	EG	-	-	-	COG0697 Permeases of the drug metabolite transporter (DMT) superfamily
PCFPDMBM_04175	3.78e-148	-	-	-	S	ko:K07124	-	ko00000	Belongs to the short-chain dehydrogenases reductases (SDR) family
PCFPDMBM_04176	1.47e-87	ygfJ	2.7.7.76	-	S	ko:K07141	ko00790,map00790	ko00000,ko00001,ko01000	Mo(VI)-molybdopterin cytosine dinucleotide biosynthetic process
PCFPDMBM_04177	3.01e-36	-	-	-	S	ko:K09984	-	ko00000	Protein of unknown function (DUF1272)
PCFPDMBM_04178	1.21e-289	-	-	-	E	-	-	-	xaa-pro aminopeptidase
PCFPDMBM_04179	6.21e-235	ampC	3.5.2.6	-	V	ko:K01467,ko:K19100,ko:K19101,ko:K19215,ko:K20319,ko:K20320	ko01501,ko02020,map01501,map02020	br01600,ko00000,ko00001,ko00002,ko01000,ko01504	Beta-lactamase
PCFPDMBM_04180	7.5e-126	-	-	-	NU	-	-	-	Fimbrial protein
PCFPDMBM_04181	0.0	fimD_3	-	-	NU	ko:K07347	ko05133,map05133	ko00000,ko00001,ko02000,ko02035,ko02044	PapC N-terminal domain
PCFPDMBM_04182	2.18e-114	-	-	-	NU	ko:K07346	-	ko00000,ko02035,ko02044,ko03110	Pili assembly chaperone PapD, C-terminal domain
PCFPDMBM_04183	1.12e-58	-	-	-	NU	ko:K07345,ko:K07351	ko05133,map05133	ko00000,ko00001,ko02035,ko02044	Fimbrial protein
PCFPDMBM_04184	3.23e-249	namA	-	-	C	-	-	-	COG1902 NADH flavin oxidoreductases, Old Yellow Enzyme family
PCFPDMBM_04185	6.16e-315	-	-	-	G	ko:K02511,ko:K13021	-	ko00000,ko02000	Major facilitator superfamily
PCFPDMBM_04186	0.0	-	-	-	E	-	-	-	homoserine dehydrogenase
PCFPDMBM_04187	2.09e-176	yhaE	1.1.1.60	-	I	ko:K00042	ko00630,ko01100,map00630,map01100	ko00000,ko00001,ko01000	COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases
PCFPDMBM_04188	3.15e-214	-	-	-	K	ko:K02529	-	ko00000,ko03000	Is the main repressor of the genes involved in the de novo synthesis of purine nucleotides, regulating purB, purC, purEK, purF, purHD, purL, purMN and guaBA expression. PurR is allosterically activated to bind its cognate DNA by binding the purine corepressors, hypoxanthine or guanine, thereby effecting transcription repression
PCFPDMBM_04191	4.37e-169	-	-	-	S	-	-	-	Serine aminopeptidase, S33
PCFPDMBM_04192	0.0	-	1.1.5.2, 1.1.5.8	-	G	ko:K00117,ko:K05358	ko00030,ko00400,ko01100,ko01110,ko01130,map00030,map00400,map01100,map01110,map01130	ko00000,ko00001,ko01000	Dehydrogenase
PCFPDMBM_04193	6.3e-43	-	-	-	-	-	-	-	-
PCFPDMBM_04194	0.0	betT	-	-	U	ko:K02168	-	ko00000,ko02000	BCCT, betaine/carnitine/choline family transporter
PCFPDMBM_04196	0.0	oppA3	-	-	E	ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
PCFPDMBM_04197	4.75e-138	yccA	-	-	S	ko:K19416	-	ko00000,ko00002,ko02000	Belongs to the BI1 family
PCFPDMBM_04198	4.26e-75	tusE	-	-	P	ko:K11179	ko04122,map04122	ko00000,ko00001,ko01000,ko03016	part of a sulfur-relay system
PCFPDMBM_04199	1.15e-57	acyP	3.6.1.7	-	C	ko:K01512	ko00620,ko00627,ko01120,map00620,map00627,map01120	ko00000,ko00001,ko01000	Acylphosphate phosphohydrolase
PCFPDMBM_04200	1.01e-149	ybcM	-	-	K	-	-	-	helix_turn_helix, arabinose operon control protein
PCFPDMBM_04201	8.45e-97	ybcL	-	-	S	ko:K06910	-	ko00000	Phosphatidylethanolamine-binding protein
PCFPDMBM_04202	4.73e-286	rlmI	2.1.1.191	-	J	ko:K06969	-	ko00000,ko01000,ko03009	Specifically methylates the cytosine at position 1962 (m5C1962) of 23S rRNA
PCFPDMBM_04203	1.12e-65	hspQ	-	-	S	ko:K11940	-	ko00000,ko03036	Involved in the degradation of certain denaturated proteins, including DnaA, during heat shock stress
PCFPDMBM_04204	4.7e-89	yccU	-	-	S	ko:K06929	-	ko00000	CoA-binding protein
PCFPDMBM_04205	3.82e-149	yccT	-	-	S	ko:K09909	-	ko00000	Belongs to the UPF0319 family
PCFPDMBM_04206	1.15e-103	mgsA	4.2.3.3	-	G	ko:K01734	ko00640,ko01120,map00640,map01120	ko00000,ko00001,ko01000	Methylglyoxal synthase
PCFPDMBM_04207	0.0	helD	3.6.4.12	-	L	ko:K03658	-	ko00000,ko01000,ko03400	DNA helicase
PCFPDMBM_04208	4.05e-93	yccF	-	-	S	-	-	-	Membrane
PCFPDMBM_04209	0.0	yccS	-	-	S	-	-	-	Membrane
PCFPDMBM_04210	2.1e-113	sxy	-	-	K	ko:K07343	-	ko00000	regulator of competence-specific genes
PCFPDMBM_04211	1.23e-99	sulA	-	-	D	ko:K13053	-	ko00000,ko03036	Component of the SOS system and an inhibitor of cell division. Accumulation of SulA causes rapid cessation of cell division and the appearance of long, non-septate filaments. In the presence of GTP, binds a polymerization-competent form of FtsZ in a 1 1 ratio, thus inhibiting FtsZ polymerization and therefore preventing it from participating in the assembly of the Z ring. This mechanism prevents the premature segregation of damaged DNA to daughter cells during cell division
PCFPDMBM_04212	2.01e-250	ompA	-	-	M	ko:K03286	-	ko00000,ko02000	Belongs to the ompA family
PCFPDMBM_04213	8.46e-101	matP	-	-	D	ko:K09911	-	ko00000	Required for spatial organization of the terminus region of the chromosome (Ter macrodomain) during the cell cycle. Prevents early segregation of duplicated Ter macrodomains during cell division. Binds specifically to matS, which is a 13 bp signature motif repeated within the Ter macrodomain
PCFPDMBM_04214	0.0	ycbZ	-	-	O	ko:K04770	-	ko00000,ko01000,ko01002	Belongs to the peptidase S16 family
PCFPDMBM_04215	2.43e-126	fabA	4.2.1.59, 5.3.3.14	-	I	ko:K01716	ko00061,ko01100,ko01212,map00061,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Necessary for the introduction of cis unsaturation into fatty acids. Catalyzes the dehydration of (3R)-3-hydroxydecanoyl- ACP to E-(2)-decenoyl-ACP and then its isomerization to Z-(3)- decenoyl-ACP. Can catalyze the dehydratase reaction for beta- hydroxyacyl-ACPs with saturated chain lengths up to 16 0, being most active on intermediate chain length
PCFPDMBM_04216	3.23e-127	ymbA	-	-	S	ko:K09857	-	ko00000	protein conserved in bacteria
PCFPDMBM_04217	0.0	pqiB	-	-	Q	ko:K06192	-	ko00000	paraquat-inducible protein b
PCFPDMBM_04218	9.46e-267	pqiA	-	-	S	ko:K03808	-	ko00000	paraquat-inducible protein A
PCFPDMBM_04219	0.0	uup	-	-	S	ko:K15738	-	ko00000,ko02000	COG0488 ATPase components of ABC transporters with duplicated ATPase domains
PCFPDMBM_04220	0.0	rlmL	2.1.1.173, 2.1.1.264	-	J	ko:K12297	-	ko00000,ko01000,ko03009	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
PCFPDMBM_04221	1.24e-256	ycbX	-	-	C	ko:K07140	-	ko00000	Mosc domain protein beta barrel domain protein
PCFPDMBM_04222	1.83e-124	zapC	-	-	D	ko:K18657	-	ko00000,ko03036	Contributes to the efficiency of the cell division process by stabilizing the polymeric form of the cell division protein FtsZ. Acts by promoting interactions between FtsZ protofilaments and suppressing the GTPase activity of FtsZ
PCFPDMBM_04223	6.18e-238	pyrD	1.3.5.2	-	F	ko:K00254	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor
PCFPDMBM_04224	2.26e-129	ssuE	1.5.1.38	-	S	ko:K00299	ko00740,ko00920,ko01100,map00740,map00920,map01100	ko00000,ko00001,ko01000	fmn reductase
PCFPDMBM_04225	2.07e-212	ssuA	-	-	P	ko:K15553	ko00920,ko02010,map00920,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
PCFPDMBM_04226	2.02e-268	ssuD	1.14.14.5	-	C	ko:K04091	ko00920,map00920	ko00000,ko00001,ko01000	Catalyzes the desulfonation of aliphatic sulfonates
PCFPDMBM_04227	1.31e-175	ssuC	-	-	P	ko:K02050,ko:K15554,ko:K15599	ko00920,ko02010,map00920,map02010	ko00000,ko00001,ko00002,ko02000	ABC-type nitrate sulfonate bicarbonate transport system permease component
PCFPDMBM_04228	2.16e-166	ssuB	-	-	P	ko:K15555	ko00920,ko02010,map00920,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system
PCFPDMBM_04229	0.0	pepN	3.4.11.2	-	E	ko:K01256	ko00480,ko01100,map00480,map01100	ko00000,ko00001,ko01000,ko01002	aminopeptidase N
PCFPDMBM_04230	7.55e-285	pncB	6.3.4.21	-	F	ko:K00763	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
PCFPDMBM_04231	0.0	asnS	6.1.1.22	-	J	ko:K01893	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Asparaginyl-tRNA synthetase
PCFPDMBM_04232	3.92e-248	ompF	-	-	M	ko:K09475,ko:K09476,ko:K11929,ko:K14062	ko01501,ko02020,map01501,map02020	ko00000,ko00001,ko00002,ko01504,ko02000	Belongs to the Gram-negative porin family
PCFPDMBM_04233	5.52e-285	aspC	2.6.1.1, 2.6.1.57	-	E	ko:K00813,ko:K00832	ko00220,ko00250,ko00270,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	aminotransferase
PCFPDMBM_04234	1.3e-158	ycbL	3.1.2.6	-	P	ko:K01069	ko00620,map00620	ko00000,ko00001,ko01000	COG0491 Zn-dependent hydrolases, including glyoxylases
PCFPDMBM_04235	4.64e-129	ycbK	-	-	S	-	-	-	protein conserved in bacteria
PCFPDMBM_04236	0.0	ycbB	-	-	M	ko:K21470	-	ko00000,ko01002,ko01011	protein conserved in bacteria
PCFPDMBM_04237	0.0	mukB	-	-	D	ko:K03632	-	ko00000,ko03036	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
PCFPDMBM_04238	4.29e-162	mukE	-	-	D	ko:K03804	-	ko00000,ko03036	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF
PCFPDMBM_04239	2.31e-313	mukF	-	-	D	ko:K03633	-	ko00000,ko03036	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Not required for mini-F plasmid partitioning. Probably acts via its interaction with MukB and MukE. Overexpression results in anucleate cells. It has a calcium binding activity
PCFPDMBM_04240	1.82e-181	cmoM	-	-	J	ko:K06219	-	ko00000	Catalyzes the methylation of 5-carboxymethoxyuridine (cmo5U) to form 5-methoxycarbonylmethoxyuridine (mcmo5U) at position 34 in tRNAs
PCFPDMBM_04241	2.72e-166	ycbC	-	-	S	-	-	-	Gram-negative-bacterium-type cell wall biogenesis
PCFPDMBM_04242	2.1e-214	ycbJ	-	-	S	-	-	-	Phosphotransferase enzyme family
PCFPDMBM_04243	3.13e-171	kdsB	2.7.7.38	-	M	ko:K00979	ko00540,ko01100,map00540,map01100	ko00000,ko00001,ko00002,ko01000,ko01005	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
PCFPDMBM_04244	8.74e-36	ycaR	-	-	S	ko:K09791	-	ko00000	Belongs to the UPF0434 family
PCFPDMBM_04245	2.17e-284	ycaQ	-	-	S	ko:K09927	-	ko00000	protein conserved in bacteria
PCFPDMBM_04246	8.91e-224	lpxK	2.7.1.130	-	F	ko:K00912	ko00540,ko01100,map00540,map01100	ko00000,ko00001,ko00002,ko01000,ko01005	Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA)
PCFPDMBM_04247	0.0	msbA	-	-	V	ko:K11085	ko02010,map02010	ko00000,ko00001,ko01000,ko02000	Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation
PCFPDMBM_04248	0.0	ycaI	-	-	S	ko:K02238	-	ko00000,ko00002,ko02044	DNA internalization-related competence protein ComEC Rec2
PCFPDMBM_04249	4e-63	-	-	-	L	-	-	-	Bacterial DNA-binding protein
PCFPDMBM_04250	0.0	rpsA	-	-	J	ko:K02945	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence
PCFPDMBM_04251	6.8e-151	cmk	2.7.4.25	-	F	ko:K00945	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the cytidylate kinase family. Type 1 subfamily
PCFPDMBM_04252	4.35e-300	aroA	2.5.1.19	-	E	ko:K00800	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
PCFPDMBM_04253	3.45e-264	serC	2.6.1.52	-	E	ko:K00831	ko00260,ko00680,ko00750,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map00750,map01100,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
PCFPDMBM_04254	9.71e-157	ycaP	-	-	S	-	-	-	Membrane
PCFPDMBM_04255	0.0	ycaO	-	-	O	ko:K09136	-	ko00000,ko03009	redox protein regulator of disulfide bond formation
PCFPDMBM_04256	3.04e-186	focA	-	-	P	ko:K06212	-	ko00000,ko02000	Formate nitrite
PCFPDMBM_04257	0.0	pflB	2.3.1.54	-	C	ko:K00656	ko00620,ko00640,ko00650,ko01100,ko01120,map00620,map00640,map00650,map01100,map01120	ko00000,ko00001,ko01000	formate C-acetyltransferase glycine radical
PCFPDMBM_04258	7.51e-187	pflA	1.97.1.4	-	C	ko:K04069	-	ko00000,ko01000	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PCFPDMBM_04259	1.24e-63	cigR	-	-	S	-	-	-	response to cobalt ion
PCFPDMBM_04260	2.09e-266	ycaD	-	-	EGP	ko:K08219	-	ko00000,ko02000	Major facilitator superfamily
PCFPDMBM_04261	4.2e-184	dmsC	-	-	S	ko:K07308	ko00920,map00920	ko00000,ko00001,ko02000	PFAM DMSO reductase anchor subunit (DmsC)
PCFPDMBM_04262	4.06e-157	dmsB	-	-	C	ko:K07307	ko00920,map00920	ko00000,ko00001,ko02000	reductase, chain B
PCFPDMBM_04263	0.0	dmsA	1.8.5.3, 1.97.1.9	-	C	ko:K07306,ko:K07309,ko:K08351	ko00450,ko00780,ko00920,ko01100,map00450,map00780,map00920,map01100	ko00000,ko00001,ko01000,ko02000	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
PCFPDMBM_04264	4.41e-306	serS	6.1.1.11	-	J	ko:K01875	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
PCFPDMBM_04265	0.0	rarA	-	-	L	ko:K07478	-	ko00000	MgsA AAA+ ATPase C terminal
PCFPDMBM_04266	9.5e-142	lolA	-	-	M	ko:K03634	-	ko00000	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
PCFPDMBM_04267	0.0	ftsK	-	-	D	ko:K03466	-	ko00000,ko03036	PFAM cell divisionFtsK SpoIIIE
PCFPDMBM_04268	2.02e-112	lrp	-	-	K	ko:K03719	-	ko00000,ko03000,ko03036	Transcriptional regulator
PCFPDMBM_04269	9.07e-233	trxB	1.8.1.9	-	C	ko:K00384	ko00450,map00450	ko00000,ko00001,ko01000	Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
PCFPDMBM_04270	0.0	cydD	-	-	V	ko:K16013	ko02010,map02010	ko00000,ko00001,ko02000	(ABC) transporter
PCFPDMBM_04271	0.0	cydC	-	-	V	ko:K16012	ko02010,map02010	ko00000,ko00001,ko02000	(ABC) transporter
PCFPDMBM_04272	1.28e-161	aat	2.3.2.6	-	O	ko:K00684	-	ko00000,ko01000	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
PCFPDMBM_04273	2.41e-45	infA	-	-	J	ko:K02518	-	ko00000,ko03012	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
PCFPDMBM_04274	2.27e-55	-	-	-	-	-	-	-	-
PCFPDMBM_04275	0.0	clpA	-	-	O	ko:K03694	-	ko00000,ko03110	Belongs to the ClpA ClpB family
PCFPDMBM_04276	1.16e-72	clpS	-	-	S	ko:K06891	-	ko00000	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
PCFPDMBM_04277	1.37e-49	cspD	-	-	K	ko:K03704	-	ko00000,ko03000	Cold shock
PCFPDMBM_04278	0.0	macB	-	-	V	ko:K05685	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides
PCFPDMBM_04279	1.58e-244	macA	-	-	M	ko:K13888	-	ko00000,ko00002,ko02000	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PCFPDMBM_04280	1.77e-212	ybjX	-	-	S	ko:K09824	-	ko00000	protein conserved in bacteria
PCFPDMBM_04281	0.0	ybjD	-	-	L	ko:K07459	-	ko00000	ATP-dependent endonuclease of the OLD family
PCFPDMBM_04282	5.87e-155	aqpZ	-	-	G	ko:K06188	-	ko00000,ko02000	Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity
PCFPDMBM_04283	1.78e-191	ybjE	-	-	S	-	-	-	membrane
PCFPDMBM_04284	0.0	hcp	1.7.99.1	-	C	ko:K05601	ko00910,map00910	ko00000,ko00001,ko01000	Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O
PCFPDMBM_04285	9.73e-228	hcr	-	-	C	ko:K11933	-	ko00000,ko01000	oxidoreductase
PCFPDMBM_04286	0.0	poxB	1.2.3.3, 1.2.5.1	-	EH	ko:K00156,ko:K00158	ko00620,ko01100,map00620,map01100	ko00000,ko00001,ko01000	Belongs to the TPP enzyme family
PCFPDMBM_04287	7.14e-231	ltaE	4.1.2.48, 4.1.2.49	-	E	ko:K01620,ko:K20801	ko00260,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko01000	PFAM aromatic amino acid beta-eliminating lyase threonine aldolase
PCFPDMBM_04288	0.0	ybjT	-	-	GM	-	-	-	Epimerase dehydratase
PCFPDMBM_04289	4.57e-245	ybjS	-	-	M	-	-	-	3-beta hydroxysteroid dehydrogenase
PCFPDMBM_04290	0.0	-	-	-	MU	-	-	-	Chitinase class I
PCFPDMBM_04291	1.26e-91	iagB	-	-	M	-	-	-	invasion protein IagB
PCFPDMBM_04292	0.0	chiA	3.2.1.14	GH18	G	ko:K01183	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	chitinase
PCFPDMBM_04293	5.21e-151	outO	3.4.23.43	-	NOU	ko:K02464,ko:K02506,ko:K02654	ko03070,map03070	ko00000,ko00001,ko00002,ko01000,ko01002,ko02035,ko02044	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
PCFPDMBM_04294	1.98e-88	gspM	-	-	U	ko:K02462	ko03070,ko05111,map03070,map05111	ko00000,ko00001,ko00002,ko02044	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
PCFPDMBM_04295	2.96e-215	gspL	-	-	U	ko:K02461	ko03070,ko05111,map03070,map05111	ko00000,ko00001,ko00002,ko02044	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
PCFPDMBM_04296	5.64e-183	gspK	-	-	U	ko:K02460	ko03070,ko05111,map03070,map05111	ko00000,ko00001,ko00002,ko02044	COG3156 Type II secretory pathway component PulK
PCFPDMBM_04297	2.19e-125	gspJ	-	-	U	ko:K02459	ko03070,ko05111,map03070,map05111	ko00000,ko00001,ko00002,ko02044	General secretion pathway protein J
PCFPDMBM_04298	2.51e-65	lspI	-	-	NU	ko:K02458	ko03070,ko05111,map03070,map05111	ko00000,ko00001,ko00002,ko02044	general secretion pathway protein
PCFPDMBM_04299	4.05e-97	gspH	-	-	NU	ko:K02456,ko:K02457,ko:K02458,ko:K02650,ko:K02679	ko02020,ko03070,ko05111,map02020,map03070,map05111	ko00000,ko00001,ko00002,ko02035,ko02044	general secretion pathway protein
PCFPDMBM_04300	1.04e-99	gspG	-	-	U	ko:K02456	ko03070,ko05111,map03070,map05111	ko00000,ko00001,ko00002,ko02044	General Secretion Pathway protein
PCFPDMBM_04301	0.0	-	-	-	MU	ko:K12678	-	ko00000,ko02000,ko02044	Autotransporter beta-domain
PCFPDMBM_04302	2.52e-38	ygdi3	-	-	S	-	-	-	Bacterial protein of unknown function (DUF903)
PCFPDMBM_04303	0.0	carB	6.3.5.5	-	F	ko:K01955	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthetase ammonia chain
PCFPDMBM_04304	4.47e-277	carA	6.3.5.5	-	F	ko:K01956	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the CarA family
PCFPDMBM_04305	9.24e-181	dapB	1.17.1.8	-	E	ko:K00215	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
PCFPDMBM_04306	3.17e-121	-	-	-	S	-	-	-	Alanyl-tRNA synthetase
PCFPDMBM_04307	2.59e-203	-	-	-	K	-	-	-	transcriptional regulator
PCFPDMBM_04308	6.28e-221	ispH	1.17.7.4	-	IM	ko:K03527	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
PCFPDMBM_04309	2.09e-100	fkpB	5.2.1.8	-	G	ko:K03774	-	ko00000,ko01000,ko03110	Peptidyl-prolyl cis-trans
PCFPDMBM_04310	4.94e-114	lspA	3.4.23.36	-	M	ko:K03101	ko03060,map03060	ko00000,ko00001,ko01000,ko01002	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
PCFPDMBM_04311	0.0	ileS	6.1.1.5	-	J	ko:K01870	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
PCFPDMBM_04312	9.28e-221	ribF	2.7.1.26, 2.7.7.2	-	H	ko:K11753	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Belongs to the ribF family
PCFPDMBM_04313	2.72e-51	rpsT	-	-	J	ko:K02968	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	30S ribosomal protein S20
PCFPDMBM_04314	1.42e-213	nhaR	-	-	K	ko:K03717	-	ko00000,ko03000	Transcriptional regulator
PCFPDMBM_04315	5.88e-234	nhaA	-	-	P	ko:K03313	-	ko00000,ko02000	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
PCFPDMBM_04316	1.04e-250	dnaJ	-	-	O	ko:K03686	-	ko00000,ko03029,ko03110	ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
PCFPDMBM_04317	0.0	dnaK	-	-	O	ko:K04043	ko03018,ko04212,ko05152,map03018,map04212,map05152	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	Heat shock 70 kDa protein
PCFPDMBM_04318	8.88e-126	yaaH	-	-	S	ko:K07034	-	ko00000	GPR1 FUN34 yaaH family protein
PCFPDMBM_04319	3.74e-283	proP_1	-	-	EGP	ko:K03762	-	ko00000,ko02000	Major facilitator superfamily
PCFPDMBM_04320	7.86e-132	mog	2.7.7.75	-	H	ko:K03831	ko00790,ko01100,ko04122,map00790,map01100,map04122	ko00000,ko00001,ko01000	Molybdenum cofactor
PCFPDMBM_04321	4.78e-221	tal	2.2.1.2	-	H	ko:K00616	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
PCFPDMBM_04322	3.4e-299	yaaJ	-	-	E	ko:K03310	-	ko00000	alanine symporter
PCFPDMBM_04323	7.94e-174	yaaA	-	-	S	ko:K09861	-	ko00000	Belongs to the UPF0246 family
PCFPDMBM_04324	8.91e-38	yaaX	-	-	S	-	-	-	Protein of unknown function (DUF2502)
PCFPDMBM_04325	1.67e-309	thrC	4.2.3.1	-	E	ko:K01733	ko00260,ko00750,ko01100,ko01110,ko01120,ko01230,map00260,map00750,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Threonine synthase
PCFPDMBM_04326	4.08e-218	thrB	2.7.1.39	-	E	ko:K00872	ko00260,ko01100,ko01110,ko01120,ko01230,map00260,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
PCFPDMBM_04327	0.0	thrA	1.1.1.3, 2.7.2.4	-	E	ko:K12524,ko:K12525	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	belongs to the aspartokinase family
PCFPDMBM_04329	4.96e-149	lasT	-	-	J	ko:K02533	-	ko00000,ko01000,ko03016	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
PCFPDMBM_04330	5.89e-171	arcA	-	-	K	ko:K07773	ko02020,ko02026,map02020,map02026	ko00000,ko00001,ko00002,ko02022	COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PCFPDMBM_04331	1.08e-277	creD	-	-	V	ko:K06143	-	ko00000	Inner membrane protein CreD
PCFPDMBM_04332	1.4e-290	creC	2.7.13.3	-	T	ko:K07641,ko:K07711	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Signal transduction histidine kinase
PCFPDMBM_04333	2.03e-153	creB	-	-	K	ko:K07663	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	Transcriptional regulatory protein, C terminal
PCFPDMBM_04334	1.5e-101	creA	-	-	S	ko:K05805	-	ko00000	protein conserved in bacteria
PCFPDMBM_04335	1.87e-213	rob	-	-	K	ko:K05804,ko:K13652,ko:K13653	-	ko00000,ko00002,ko03000,ko03036	Binds to the right arm of the replication origin oriC
PCFPDMBM_04336	2.14e-148	gpmB	5.4.2.12	-	G	ko:K15634	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the phosphoglycerate mutase family
PCFPDMBM_04337	8.12e-113	yjjX	-	-	F	-	-	-	Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions
PCFPDMBM_04338	1.02e-67	trpR	-	-	K	ko:K03720	-	ko00000,ko03000	This protein is an aporepressor. When complexed with L- tryptophan it binds the operator region of the trp operon (5'- ACTAGT-'3') and prevents the initiation of transcription. The complex also regulates trp repressor biosynthesis by binding to its regulatory region
PCFPDMBM_04339	0.0	slt	-	GH23	M	ko:K08309	-	ko00000,ko01000,ko01011	Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains)
PCFPDMBM_04340	0.0	yjjK	3.6.3.25	-	S	ko:K06020	-	ko00000,ko01000	A translation factor that gates the progression of the 70S ribosomal initiation complex (IC, containing tRNA(fMet) in the P site) into the translation elongation cycle by using a mechanism sensitive to the ATP ADP ratio. Binds to the 70S ribosome E site where it modulates the state of the translating ribosome during subunit translocation
PCFPDMBM_04341	4.55e-307	nadR	2.7.1.22, 2.7.7.1	-	H	ko:K06211	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000,ko03000	transcriptional regulator
PCFPDMBM_04342	0.0	radA	-	-	O	ko:K04485	-	ko00000,ko03400	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
PCFPDMBM_04343	4.43e-224	serB	3.1.3.3	-	E	ko:K01079	ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko01009	phosphoserine phosphatase
PCFPDMBM_04344	9.68e-138	smp	-	-	S	ko:K07186	-	ko00000	membrane protein affecting hemolysin expression
PCFPDMBM_04345	7.02e-245	lplA	6.3.1.20	-	H	ko:K03800	ko00785,ko01100,map00785,map01100	ko00000,ko00001,ko01000	Catalyzes both the ATP-dependent activation of exogenously supplied lipoate to lipoyl-AMP and the transfer of the activated lipoyl onto the lipoyl domains of lipoate-dependent enzymes
PCFPDMBM_04346	3.27e-169	deoD	2.4.2.1	-	F	ko:K03784	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	Purine nucleoside phosphorylase
PCFPDMBM_04347	2.33e-303	deoB	5.4.2.7	-	G	ko:K01839	ko00030,ko00230,map00030,map00230	ko00000,ko00001,ko01000	Phosphotransfer between the C1 and C5 carbon atoms of pentose
PCFPDMBM_04348	3.92e-305	deoA	2.4.2.4	-	F	ko:K00758	ko00240,ko00983,ko01100,ko05219,map00240,map00983,map01100,map05219	ko00000,ko00001,ko01000	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
PCFPDMBM_04349	1.46e-176	deoC	4.1.2.4	-	F	ko:K01619	ko00030,map00030	ko00000,ko00001,ko01000	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
PCFPDMBM_04350	0.0	yjjI	-	-	F	-	-	-	anaerobic respiration
PCFPDMBM_04351	6.39e-167	yjjW	1.97.1.4	-	O	ko:K04069	-	ko00000,ko01000	4Fe-4S single cluster domain
PCFPDMBM_04352	1.98e-164	yjjV	-	-	L	ko:K03424	-	ko00000,ko01000	Deoxyribonuclease
PCFPDMBM_04353	4.61e-250	yjjU	-	-	I	-	-	-	esterase of the alpha-beta hydrolase superfamily
PCFPDMBM_04354	6.5e-26	ytjA	-	-	S	-	-	-	UPF0391 membrane protein
PCFPDMBM_04355	2.01e-123	osmY	-	-	S	ko:K04065	-	ko00000	Periplasmic or secreted lipoprotein
PCFPDMBM_04356	0.0	prfC	-	-	J	ko:K02837	-	ko00000,ko03012	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
PCFPDMBM_04357	3.02e-153	yjjG	3.1.3.5, 3.8.1.2	-	S	ko:K01560,ko:K07025,ko:K08723	ko00230,ko00240,ko00361,ko00625,ko00760,ko01100,ko01110,ko01120,map00230,map00240,map00361,map00625,map00760,map01100,map01110,map01120	ko00000,ko00001,ko01000	hydrolase
PCFPDMBM_04358	1.21e-98	rimI	2.3.1.128	-	K	ko:K03789	-	ko00000,ko01000,ko03009	This enzyme acetylates the N-terminal alanine of ribosomal protein S18
PCFPDMBM_04359	1.24e-84	holD	2.7.7.7	-	L	ko:K02344	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is
PCFPDMBM_04360	2.36e-245	rsmC	2.1.1.172	-	J	ko:K00564	-	ko00000,ko01000,ko03009	Specifically methylates the guanine in position 1207 of 16S rRNA in the 30S particle
PCFPDMBM_04364	2.98e-32	proP32	-	-	S	-	-	-	Protein of unknown function (DUF1435)
PCFPDMBM_04365	3.49e-175	fhuF	-	-	S	ko:K13255	-	ko00000	Iron reductase
PCFPDMBM_04366	2.41e-314	bglF	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PCFPDMBM_04367	3e-100	-	-	-	S	-	-	-	Prolyl-tRNA synthetase
PCFPDMBM_04368	1.79e-113	bglJ	-	-	K	-	-	-	transcriptional
PCFPDMBM_04369	1.1e-121	yjjQ	-	-	K	-	-	-	regulator
PCFPDMBM_04370	1.48e-174	yjjP	-	-	S	-	-	-	Membrane
PCFPDMBM_04371	1.97e-102	yjjB	-	-	S	-	-	-	UPF0442 protein
PCFPDMBM_04372	3.82e-141	-	-	-	K	-	-	-	transcriptional regulator
PCFPDMBM_04373	4.64e-96	ohr	-	-	O	-	-	-	Organic Hydroperoxide Resistance Protein
PCFPDMBM_04374	8.98e-122	dnaT	-	-	L	ko:K02317	ko03440,map03440	ko00000,ko00001,ko03400	it is also involved in inducing stable DNA replication during SOS response. It forms, in concert with dnaB protein and other prepriming proteins dnaC, N, N', N'' a prepriming protein complex on the specific site of the template DNA recognized by protein N'
PCFPDMBM_04375	1.61e-167	dnaC	-	-	L	ko:K02315,ko:K10762	-	ko00000,ko03032	DNA replication protein
PCFPDMBM_04376	1.46e-84	yjjA	-	-	S	-	-	-	Glycoprotein Receptor
PCFPDMBM_04377	0.0	mdoB	2.7.8.20	-	M	ko:K01002	ko01100,map01100	ko00000,ko01000	Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
PCFPDMBM_04378	7.73e-303	tsr	-	-	NT	ko:K03406,ko:K05874,ko:K05875,ko:K05876,ko:K05877	ko02020,ko02030,map02020,map02030	ko00000,ko00001,ko02035	chemotaxis, protein
PCFPDMBM_04379	7.51e-86	hpaR	-	-	K	-	-	-	Homoprotocatechuate degradative operon repressor
PCFPDMBM_04380	5.09e-284	hpaG	4.1.1.68	-	Q	ko:K05921	ko00350,ko01120,ko01220,map00350,map01120,map01220	ko00000,ko00001,ko00002,ko01000	4-hydroxyphenylacetate degradation bifunctional isomerase
PCFPDMBM_04381	0.0	hpaE	1.2.1.60	-	C	ko:K00151	ko00350,ko01120,ko01220,map00350,map01120,map01220	ko00000,ko00001,ko00002,ko01000	belongs to the aldehyde dehydrogenase family
PCFPDMBM_04382	2.09e-207	hpaD	1.13.11.15	-	S	ko:K00455	ko00350,ko01120,ko01220,map00350,map01120,map01220	ko00000,ko00001,ko00002,ko01000	3,4-dihydroxyphenylacetate 2,3-dioxygenase
PCFPDMBM_04383	2.61e-83	hpcD	5.3.3.10	-	E	ko:K01826	ko00350,ko01120,ko01220,map00350,map01120,map01220	ko00000,ko00001,ko00002,ko01000	5-carboxymethyl-2-hydroxymuconate isomerase
PCFPDMBM_04384	1.51e-192	hpaH	4.1.1.77	-	Q	ko:K01617,ko:K02509	ko00350,ko00362,ko00621,ko00622,ko01100,ko01120,ko01220,map00350,map00362,map00621,map00622,map01100,map01120,map01220	ko00000,ko00001,ko00002,ko01000	hydratase
PCFPDMBM_04385	1.26e-174	hpaI	4.1.2.52	-	G	ko:K02510	ko00350,ko01120,map00350,map01120	ko00000,ko00001,ko01000	HpcH/HpaI aldolase/citrate lyase family
PCFPDMBM_04386	3.52e-308	hpaX	-	-	G	ko:K02511	-	ko00000,ko02000	Major facilitator superfamily
PCFPDMBM_04387	5.8e-208	hpaA	-	-	K	ko:K02508	-	ko00000,ko03000	AraC-like ligand binding domain
PCFPDMBM_04388	3.27e-142	-	-	-	K	-	-	-	Transcriptional regulator, AbiEi antitoxin N-terminal domain
PCFPDMBM_04389	2.08e-193	-	-	-	S	-	-	-	Nucleotidyl transferase AbiEii toxin, Type IV TA system
PCFPDMBM_04390	0.0	hpaB	1.14.14.9	-	Q	ko:K00483	ko00350,ko01120,ko01220,map00350,map01120,map01220	ko00000,ko00001,ko01000	4-hydroxyphenylacetate 3-monooxygenase oxygenase component
PCFPDMBM_04391	9.12e-112	hpaC	1.5.1.36	-	S	ko:K00484,ko:K09024	ko00240,ko00350,ko00740,ko01100,ko01120,ko01220,map00240,map00350,map00740,map01100,map01120,map01220	ko00000,ko00001,ko01000	4-hydroxyphenylacetate 3-monooxygenase, reductase component
PCFPDMBM_04392	3.78e-57	-	-	-	-	-	-	-	-
PCFPDMBM_04393	0.0	kpsD	-	-	M	ko:K01991	ko02026,map02026	ko00000,ko00001,ko02000	polysaccharide export
PCFPDMBM_04394	2.81e-167	kpsM	-	-	GM	ko:K09688	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Transport Permease Protein
PCFPDMBM_04395	1.47e-86	kpsT	3.6.3.38	-	GM	ko:K09689,ko:K09691	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter
PCFPDMBM_04396	6.5e-246	kpsE	-	-	M	ko:K10107	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG3524 Capsule polysaccharide export protein
PCFPDMBM_04397	1.36e-94	wgeB	-	-	S	-	-	-	Glycosyltransferase like family 2
PCFPDMBM_04398	1.44e-144	-	-	-	M	-	-	-	Glycosyl transferase 4-like domain
PCFPDMBM_04402	5.67e-187	-	-	-	M	-	-	-	Glycosyltransferase family 92
PCFPDMBM_04403	1.82e-311	-	-	GT2,GT4	G	ko:K20444	-	ko00000,ko01000,ko01005,ko02000	Glycosyl transferase, family 2
PCFPDMBM_04404	2.34e-218	-	-	-	M	-	-	-	transferase activity, transferring glycosyl groups
PCFPDMBM_04405	1.49e-253	rfbB	4.2.1.46	-	M	ko:K01710	ko00521,ko00523,ko00525,ko01055,ko01130,map00521,map00523,map00525,map01055,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
PCFPDMBM_04406	2.16e-206	rfbD	1.1.1.133	-	M	ko:K00067	ko00521,ko00523,ko01130,map00521,map00523,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
PCFPDMBM_04407	1.06e-199	rfbA	2.7.7.24	-	M	ko:K00973	ko00521,ko00523,ko00525,ko01130,map00521,map00523,map00525,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
PCFPDMBM_04408	6.05e-123	rfbC	5.1.3.13	-	M	ko:K01790	ko00521,ko00523,ko01130,map00521,map00523,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
PCFPDMBM_04409	0.0	-	-	-	M	ko:K07266	-	ko00000	Capsule polysaccharide biosynthesis protein
PCFPDMBM_04410	7.15e-283	kpsS	-	-	M	ko:K07265	-	ko00000	capsule polysaccharide
PCFPDMBM_04411	6.96e-239	insH6	-	-	L	ko:K07481	-	ko00000	COG3039 Transposase and inactivated derivatives IS5 family
PCFPDMBM_04412	1.63e-185	-	-	-	K	-	-	-	transcriptional regulator
PCFPDMBM_04413	0.0	cstA	-	-	T	ko:K06200	-	ko00000	Carbon starvation protein
PCFPDMBM_04414	4.15e-46	yjiX	-	-	S	-	-	-	small protein
PCFPDMBM_04415	3.66e-225	yjiA	-	-	S	-	-	-	cobalamin synthesis protein
PCFPDMBM_04416	4.45e-122	-	-	-	S	-	-	-	YfaZ precursor
PCFPDMBM_04417	0.0	ssdA	1.2.1.16, 1.2.1.20, 1.2.1.24, 1.2.1.79	-	C	ko:K00135,ko:K08324	ko00250,ko00310,ko00350,ko00650,ko00760,ko01100,ko01120,map00250,map00310,map00350,map00650,map00760,map01100,map01120	ko00000,ko00001,ko00002,ko01000	belongs to the aldehyde dehydrogenase family
PCFPDMBM_04418	2.56e-99	-	-	-	S	ko:K11903	ko02025,ko03070,map02025,map03070	ko00000,ko00001,ko00002,ko02044	Type VI secretion system effector
PCFPDMBM_04420	1.73e-134	-	-	-	-	-	-	-	-
PCFPDMBM_04421	1.83e-46	-	-	-	S	-	-	-	BrnA antitoxin of type II toxin-antitoxin system
PCFPDMBM_04422	7.69e-151	-	-	-	K	-	-	-	transcriptional regulator
PCFPDMBM_04423	3.61e-116	-	-	-	E	-	-	-	PFAM Lysine exporter protein (LYSE YGGA)
PCFPDMBM_04424	4.12e-293	yjiN	-	-	S	-	-	-	Membrane
PCFPDMBM_04425	3.12e-236	yteR	3.2.1.172	GH105	S	ko:K15532	-	ko00000,ko01000	PFAM glycosyl hydrolase family 88
PCFPDMBM_04426	1.22e-121	-	-	-	-	-	-	-	-
PCFPDMBM_04427	0.0	-	-	-	G	-	-	-	Belongs to the glycosyl hydrolase 67 family
PCFPDMBM_04428	8.5e-242	-	-	-	S	-	-	-	Protein of unknown function (DUF2955)
PCFPDMBM_04429	5.04e-237	yiaV	-	-	V	ko:K03543	-	ko00000,ko00002,ko02000	Secretion Protein
PCFPDMBM_04430	2.81e-101	-	-	-	K	ko:K06075	-	ko00000,ko03000	Transcriptional regulator
PCFPDMBM_04432	1.44e-47	-	-	-	S	-	-	-	Protein of unknown function (DUF1778)
PCFPDMBM_04433	4.51e-93	Z012_05445	-	-	K	-	-	-	acetyltransferase
PCFPDMBM_04434	1.01e-138	ydfF	-	-	K	-	-	-	transcriptional regulator
PCFPDMBM_04435	7.01e-77	-	-	-	S	-	-	-	ACT domain protein
PCFPDMBM_04436	6.43e-66	yqjZ	-	-	C	-	-	-	Antibiotic biosynthesis monooxygenase
PCFPDMBM_04437	1.46e-302	-	1.2.1.3	-	C	ko:K00128	ko00010,ko00053,ko00071,ko00280,ko00310,ko00330,ko00340,ko00380,ko00410,ko00561,ko00620,ko00625,ko00903,ko00981,ko01100,ko01110,ko01120,ko01130,map00010,map00053,map00071,map00280,map00310,map00330,map00340,map00380,map00410,map00561,map00620,map00625,map00903,map00981,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	belongs to the aldehyde dehydrogenase family
PCFPDMBM_04438	1.04e-195	-	-	-	K	-	-	-	transcriptional regulator
PCFPDMBM_04439	3.25e-102	-	-	-	S	-	-	-	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
PCFPDMBM_04440	0.0	gabR_2	-	-	K	ko:K00375,ko:K05825	ko00300,ko01100,ko01130,ko01210,map00300,map01100,map01130,map01210	ko00000,ko00001,ko01000,ko03000	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
PCFPDMBM_04441	1.59e-26	yjiS	-	-	S	-	-	-	Domain of unknown function (DUF1127)
PCFPDMBM_04442	1.05e-297	yjiR	-	-	K	-	-	-	Transcriptional regulator
PCFPDMBM_04443	0.0	foxA	-	-	P	ko:K02014	-	ko00000,ko02000	Receptor
PCFPDMBM_04444	7.72e-211	-	-	-	K	-	-	-	Transcriptional regulator
PCFPDMBM_04445	1.58e-41	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2171)
PCFPDMBM_04446	5.06e-31	-	-	-	-	-	-	-	-
PCFPDMBM_04447	3.51e-274	ycfD	1.14.11.47	-	S	ko:K18850	-	ko00000,ko01000,ko03009	Cupin 4 family protein
PCFPDMBM_04448	6.2e-44	-	-	-	-	-	-	-	-
PCFPDMBM_04449	9.42e-161	-	-	-	K	-	-	-	Transcriptional Regulator, DeoR family
PCFPDMBM_04451	4.45e-242	ybjJ	-	-	EGP	-	-	-	Major facilitator superfamily
PCFPDMBM_04452	6.88e-80	-	4.4.1.5	-	E	ko:K01759	ko00620,map00620	ko00000,ko00001,ko01000	bleomycin resistance protein
PCFPDMBM_04453	0.0	-	-	-	TV	ko:K07452	-	ko00000,ko01000,ko02048	AAA domain (dynein-related subfamily)
PCFPDMBM_04454	6.22e-231	-	-	-	V	ko:K19147	-	ko00000,ko02048	McrBC 5-methylcytosine restriction system component
PCFPDMBM_04455	9.42e-123	-	-	-	K	-	-	-	response regulator
PCFPDMBM_04456	0.0	-	2.7.13.3	-	T	ko:K02482	-	ko00000,ko01000,ko01001,ko02022	Histidine kinase
PCFPDMBM_04457	6.5e-73	-	-	-	T	-	-	-	response regulator
PCFPDMBM_04458	1.72e-53	-	-	-	S	-	-	-	ABC transporter substrate-binding protein
PCFPDMBM_04459	2.4e-37	-	-	-	S	-	-	-	Protein of unknown function (DUF1427)
PCFPDMBM_04460	3e-161	-	-	-	Q	-	-	-	Hydrolase
PCFPDMBM_04461	0.0	-	-	-	S	-	-	-	metal-dependent hydrolase with the TIM-barrel fold
PCFPDMBM_04462	5.46e-86	-	-	-	S	ko:K15977	-	ko00000	LysR family transcriptional regulator
PCFPDMBM_04463	0.0	-	-	-	EGP	ko:K08217	-	br01600,ko00000,ko01504,ko02000	permeases of the major facilitator superfamily
PCFPDMBM_04464	6.68e-199	cpo	1.11.1.10	-	I	ko:K00433	-	ko00000,ko01000	Alpha beta hydrolase
PCFPDMBM_04465	2.49e-95	fosA	2.5.1.18	-	E	ko:K21253,ko:K21264,ko:K21265	-	ko00000,ko01000,ko01504	Glutathione transferase
PCFPDMBM_04466	6.46e-14	-	-	-	-	-	-	-	-
PCFPDMBM_04467	0.0	prr	1.2.1.19	-	C	ko:K00137	ko00330,ko00410,ko01100,map00330,map00410,map01100	ko00000,ko00001,ko01000	belongs to the aldehyde dehydrogenase family
PCFPDMBM_04468	0.0	-	-	-	E	-	-	-	amino acid
PCFPDMBM_04469	2.13e-228	csiD	-	-	C	ko:K15737	-	ko00000	May be involved in the control of utilization of gamma- aminobutyric acid
PCFPDMBM_04470	3.32e-283	lhgO	-	-	S	ko:K15736	-	ko00000,ko01000	L-2-hydroxyglutarate oxidase LhgO
PCFPDMBM_04471	0.0	gabD	1.2.1.16, 1.2.1.20, 1.2.1.79	-	C	ko:K00135	ko00250,ko00310,ko00350,ko00650,ko00760,ko01100,ko01120,map00250,map00310,map00350,map00650,map00760,map01100,map01120	ko00000,ko00001,ko00002,ko01000	belongs to the aldehyde dehydrogenase family
PCFPDMBM_04472	1.52e-300	gabT	2.6.1.19, 2.6.1.22, 2.6.1.48	-	E	ko:K07250,ko:K14268	ko00250,ko00280,ko00310,ko00410,ko00640,ko00650,ko01100,ko01120,map00250,map00280,map00310,map00410,map00640,map00650,map01100,map01120	ko00000,ko00001,ko00002,ko01000,ko01007	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
PCFPDMBM_04473	1.12e-150	csiR	-	-	K	ko:K15735	-	ko00000,ko03000	Transcriptional
PCFPDMBM_04474	9.9e-242	-	2.7.11.1	-	S	ko:K07154	-	ko00000,ko01000,ko01001,ko02048	protein related to capsule biosynthesis enzymes
PCFPDMBM_04475	4.56e-57	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
PCFPDMBM_04476	5.04e-39	-	-	-	S	-	-	-	acyl carrier protein